Query 002063
Match_columns 973
No_of_seqs 900 out of 6171
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 10:47:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002063.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002063hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 1.6E-77 5.6E-82 740.5 35.8 560 26-592 7-745 (768)
2 3rgz_A Protein brassinosteroid 100.0 1.8E-60 6.1E-65 588.3 25.4 491 73-569 178-744 (768)
3 3t6q_A CD180 antigen; protein- 100.0 2.7E-57 9.2E-62 547.6 37.4 505 63-571 14-566 (606)
4 4eco_A Uncharacterized protein 100.0 1.4E-58 4.6E-63 558.3 23.8 490 30-568 29-603 (636)
5 4ecn_A Leucine-rich repeat pro 100.0 1.8E-57 6.1E-62 555.9 32.9 499 28-565 266-864 (876)
6 1ziw_A TOLL-like receptor 3; i 100.0 2.5E-56 8.5E-61 546.6 39.2 531 60-591 3-626 (680)
7 3vq2_A TLR4, TOLL-like recepto 100.0 2.6E-56 8.9E-61 539.0 28.1 502 59-571 5-564 (606)
8 3j0a_A TOLL-like receptor 5; m 100.0 1.1E-54 3.7E-59 542.3 41.0 495 61-570 14-565 (844)
9 1ziw_A TOLL-like receptor 3; i 100.0 3.6E-54 1.2E-58 527.5 37.5 497 73-570 49-627 (680)
10 3t6q_A CD180 antigen; protein- 100.0 3.1E-54 1.1E-58 520.8 34.5 508 77-591 16-564 (606)
11 3vq2_A TLR4, TOLL-like recepto 100.0 1.2E-53 4.2E-58 515.6 27.6 502 76-592 14-563 (606)
12 3j0a_A TOLL-like receptor 5; m 100.0 8.8E-52 3E-56 516.0 34.4 459 73-546 48-564 (844)
13 2z63_A TOLL-like receptor 4, v 100.0 3.9E-51 1.3E-55 490.3 32.2 486 72-592 27-561 (570)
14 2z81_A CD282 antigen, TOLL-lik 100.0 2.3E-51 8E-56 489.7 24.1 485 60-570 3-515 (549)
15 4gt4_A Tyrosine-protein kinase 100.0 3.3E-51 1.1E-55 443.4 17.2 262 675-955 25-306 (308)
16 4aoj_A High affinity nerve gro 100.0 3.5E-51 1.2E-55 447.5 17.3 262 676-956 41-320 (329)
17 4asz_A BDNF/NT-3 growth factor 100.0 1.7E-51 5.9E-56 443.6 14.0 261 676-955 13-289 (299)
18 3omv_A RAF proto-oncogene seri 100.0 3.7E-50 1.3E-54 432.8 20.6 260 676-957 36-302 (307)
19 4b9d_A Serine/threonine-protei 100.0 2.6E-50 8.8E-55 439.9 17.7 251 675-949 23-277 (350)
20 4aw0_A HPDK1, 3-phosphoinositi 100.0 5.5E-50 1.9E-54 429.8 19.3 247 676-947 32-283 (311)
21 2z7x_B TOLL-like receptor 1, v 100.0 1.3E-49 4.5E-54 470.9 24.2 457 76-571 3-487 (520)
22 4fih_A Serine/threonine-protei 100.0 8.4E-50 2.9E-54 435.1 20.4 249 676-949 74-324 (346)
23 4g3f_A NF-kappa-beta-inducing 100.0 2.9E-49 9.8E-54 429.7 20.4 254 675-953 57-314 (336)
24 2z63_A TOLL-like receptor 4, v 100.0 4.2E-48 1.4E-52 463.9 31.2 476 78-591 12-535 (570)
25 3fpq_A Serine/threonine-protei 100.0 6.1E-49 2.1E-53 420.2 21.2 245 679-950 29-284 (290)
26 3hyh_A Carbon catabolite-derep 100.0 1.4E-48 4.9E-53 413.5 20.8 248 674-950 11-264 (275)
27 4fie_A Serine/threonine-protei 100.0 1.2E-48 4.1E-53 436.5 20.7 249 676-949 151-401 (423)
28 4ase_A Vascular endothelial gr 100.0 2.7E-49 9.1E-54 436.0 14.5 262 676-955 64-347 (353)
29 4eco_A Uncharacterized protein 100.0 1.1E-48 3.6E-53 472.0 19.9 453 97-590 81-603 (636)
30 4g8a_A TOLL-like receptor 4; l 100.0 4.7E-47 1.6E-51 461.1 34.2 497 44-571 7-586 (635)
31 4ecn_A Leucine-rich repeat pro 100.0 2.9E-47 9.9E-52 465.8 25.9 440 97-572 323-847 (876)
32 3hmm_A TGF-beta receptor type- 100.0 4E-48 1.4E-52 420.7 16.1 265 677-955 4-297 (303)
33 3ubd_A Ribosomal protein S6 ki 100.0 3.4E-48 1.2E-52 416.3 14.7 247 676-949 24-282 (304)
34 2z81_A CD282 antigen, TOLL-lik 100.0 2.2E-47 7.4E-52 455.4 22.9 474 60-546 11-514 (549)
35 4g31_A Eukaryotic translation 100.0 2.3E-47 7.9E-52 412.3 18.6 252 675-949 4-280 (299)
36 2z7x_B TOLL-like receptor 1, v 100.0 2.2E-46 7.5E-51 443.3 25.1 454 100-591 3-485 (520)
37 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.2E-45 4.2E-50 440.6 28.3 457 76-571 34-516 (562)
38 4f9c_A Cell division cycle 7-r 100.0 1.6E-44 5.4E-49 401.1 20.8 199 675-884 20-250 (361)
39 4b99_A Mitogen-activated prote 100.0 2.6E-44 9E-49 403.3 21.5 264 676-950 54-346 (398)
40 4g8a_A TOLL-like receptor 4; l 100.0 1.5E-42 5.3E-47 421.3 34.3 503 77-592 35-585 (635)
41 3v5w_A G-protein coupled recep 100.0 1.8E-43 6.2E-48 411.5 22.3 251 674-950 187-451 (689)
42 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 3.2E-43 1.1E-47 419.7 24.7 434 73-547 52-515 (562)
43 1ogq_A PGIP-2, polygalacturona 100.0 7E-43 2.4E-47 383.5 22.0 291 28-324 3-302 (313)
44 1jl5_A Outer protein YOPM; leu 100.0 2.5E-42 8.6E-47 398.0 25.9 409 73-572 11-436 (454)
45 3uto_A Twitchin; kinase, muscl 100.0 5E-43 1.7E-47 412.9 20.5 253 675-950 156-412 (573)
46 3v47_A TOLL-like receptor 5B a 100.0 6.4E-42 2.2E-46 398.0 26.8 376 144-570 30-413 (455)
47 3v47_A TOLL-like receptor 5B a 100.0 4.9E-42 1.7E-46 399.0 25.0 369 193-591 30-412 (455)
48 1jl5_A Outer protein YOPM; leu 100.0 8.5E-42 2.9E-46 393.6 21.1 397 91-574 5-420 (454)
49 2qkw_B Protein kinase; three-h 100.0 7.1E-42 2.4E-46 378.0 19.5 279 672-956 35-316 (321)
50 3uim_A Brassinosteroid insensi 100.0 6.1E-41 2.1E-45 371.5 22.1 282 672-957 26-313 (326)
51 3fxz_A Serine/threonine-protei 100.0 8E-41 2.8E-45 364.7 22.3 251 675-950 19-271 (297)
52 2psq_A Fibroblast growth facto 100.0 6.6E-41 2.2E-45 376.8 19.7 261 675-954 80-363 (370)
53 3soc_A Activin receptor type-2 100.0 5.5E-41 1.9E-45 370.7 17.8 264 674-954 22-317 (322)
54 3fe3_A MAP/microtubule affinit 100.0 3.8E-40 1.3E-44 363.6 24.3 249 675-951 14-267 (328)
55 3s95_A LIMK-1, LIM domain kina 100.0 9.7E-41 3.3E-45 367.0 19.0 260 675-955 9-282 (310)
56 3p86_A Serine/threonine-protei 100.0 4.8E-41 1.6E-45 368.4 16.0 264 675-962 36-305 (309)
57 3zgw_A Maternal embryonic leuc 100.0 4.9E-40 1.7E-44 364.7 23.2 253 673-951 7-263 (347)
58 3bz5_A Internalin-J, INLJ; leu 100.0 1.8E-39 6.2E-44 374.4 28.4 366 83-548 28-393 (457)
59 3tki_A Serine/threonine-protei 100.0 2.6E-40 9E-45 364.9 19.2 256 674-951 5-264 (323)
60 3kul_A Ephrin type-A receptor 100.0 1.4E-40 4.7E-45 367.7 16.3 261 675-958 48-316 (325)
61 4euu_A Serine/threonine-protei 100.0 2.1E-39 7.1E-44 357.8 25.5 272 676-955 9-309 (319)
62 1o6l_A RAC-beta serine/threoni 100.0 1.4E-39 4.9E-44 360.0 24.2 249 675-950 4-262 (337)
63 4eqm_A Protein kinase; transfe 100.0 1.3E-39 4.3E-44 354.8 23.3 262 674-957 9-277 (294)
64 3cbl_A C-FES, proto-oncogene t 100.0 7.6E-41 2.6E-45 377.7 13.4 257 675-954 113-373 (377)
65 1tki_A Titin; serine kinase, m 100.0 5E-40 1.7E-44 362.1 19.4 254 675-951 4-260 (321)
66 2yab_A Death-associated protei 100.0 1.1E-39 3.8E-44 364.2 21.9 253 675-951 11-275 (361)
67 3p1a_A MYT1 kinase, membrane-a 100.0 1.5E-39 5E-44 357.4 22.5 262 659-950 40-306 (311)
68 2nru_A Interleukin-1 receptor- 100.0 5.2E-39 1.8E-43 352.8 25.8 265 680-954 35-305 (307)
69 3c0i_A Peripheral plasma membr 100.0 1.1E-39 3.8E-44 364.3 20.7 255 675-949 23-287 (351)
70 3poz_A Epidermal growth factor 100.0 2.4E-40 8.2E-45 366.4 14.9 256 675-954 14-277 (327)
71 3l9p_A Anaplastic lymphoma kin 100.0 1.5E-40 5.1E-45 373.6 13.4 264 673-955 68-345 (367)
72 1csn_A Casein kinase-1; phosph 100.0 1.9E-39 6.5E-44 354.6 21.1 265 675-956 9-284 (298)
73 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.4E-39 4.6E-44 349.8 19.4 258 675-957 7-266 (268)
74 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.2E-39 4.2E-44 362.9 19.6 251 673-950 20-282 (353)
75 3vhe_A Vascular endothelial gr 100.0 3.1E-40 1.1E-44 371.1 14.8 262 675-954 21-354 (359)
76 3bz5_A Internalin-J, INLJ; leu 100.0 5.4E-39 1.8E-43 370.5 25.3 368 107-574 28-396 (457)
77 4hcu_A Tyrosine-protein kinase 100.0 7E-40 2.4E-44 352.3 16.3 254 676-954 10-265 (269)
78 4dc2_A Protein kinase C IOTA t 100.0 3.1E-39 1.1E-43 363.6 22.2 255 674-950 50-320 (396)
79 3ugc_A Tyrosine-protein kinase 100.0 1.2E-40 4E-45 363.6 10.3 263 675-954 9-290 (295)
80 2izr_A Casein kinase I isoform 100.0 1.8E-39 6.1E-44 360.1 19.8 260 676-953 9-279 (330)
81 3soa_A Calcium/calmodulin-depe 100.0 3.6E-39 1.2E-43 369.6 22.8 255 673-950 8-269 (444)
82 1fot_A TPK1 delta, CAMP-depend 100.0 6E-39 2E-43 352.4 23.6 246 675-950 5-260 (318)
83 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.2E-39 4.2E-44 360.1 18.1 250 673-951 6-261 (336)
84 2y0a_A Death-associated protei 100.0 3.3E-39 1.1E-43 356.8 21.4 253 675-951 10-274 (326)
85 1o6v_A Internalin A; bacterial 100.0 4.4E-38 1.5E-42 366.1 32.0 346 95-495 44-389 (466)
86 4fr4_A YANK1, serine/threonine 100.0 4.4E-39 1.5E-43 361.2 22.4 250 674-948 13-271 (384)
87 1luf_A Muscle-specific tyrosin 100.0 8.4E-40 2.9E-44 365.1 16.4 264 675-957 46-337 (343)
88 3tt0_A Basic fibroblast growth 100.0 1.5E-39 5.2E-44 367.9 18.6 262 675-955 68-352 (382)
89 2ivs_A Proto-oncogene tyrosine 100.0 1.1E-39 3.8E-44 359.3 17.0 261 675-954 22-310 (314)
90 2pmi_A Negative RE, cyclin-dep 100.0 4.7E-39 1.6E-43 354.4 21.8 273 675-955 4-302 (317)
91 4aw2_A Serine/threonine-protei 100.0 7.8E-40 2.7E-44 373.4 16.1 256 675-950 73-340 (437)
92 2qol_A Ephrin receptor; recept 100.0 6.7E-40 2.3E-44 368.8 15.2 257 675-954 44-308 (373)
93 3o0g_A Cell division protein k 100.0 4.1E-39 1.4E-43 350.7 20.9 265 676-950 2-284 (292)
94 2c30_A Serine/threonine-protei 100.0 5.6E-39 1.9E-43 354.1 22.3 249 678-951 47-297 (321)
95 2bdw_A Hypothetical protein K1 100.0 3.3E-39 1.1E-43 361.5 20.6 253 673-949 26-285 (362)
96 3lb7_A RAF proto-oncogene seri 100.0 2.6E-39 8.8E-44 354.4 19.1 261 675-957 35-302 (307)
97 3qd2_B Eukaryotic translation 100.0 2.7E-39 9.2E-44 359.3 19.4 254 673-949 3-326 (332)
98 3qup_A Tyrosine-protein kinase 100.0 1.7E-39 5.7E-44 359.4 17.7 261 675-954 22-297 (323)
99 3kex_A Receptor tyrosine-prote 100.0 4E-40 1.4E-44 364.4 12.3 257 675-955 12-276 (325)
100 1xjd_A Protein kinase C, theta 100.0 3.2E-39 1.1E-43 358.1 19.4 250 673-949 14-270 (345)
101 3niz_A Rhodanese family protei 100.0 5.5E-39 1.9E-43 352.6 21.1 263 674-949 19-301 (311)
102 1rjb_A FL cytokine receptor; k 100.0 1.4E-39 4.9E-44 363.4 16.7 266 674-957 43-336 (344)
103 2w4o_A Calcium/calmodulin-depe 100.0 1.7E-39 5.8E-44 362.4 16.9 254 675-951 52-308 (349)
104 2i1m_A Macrophage colony-stimu 100.0 1.4E-39 4.6E-44 361.8 16.0 262 675-954 45-325 (333)
105 1rdq_E PKA C-alpha, CAMP-depen 100.0 8.1E-39 2.8E-43 356.1 22.2 247 674-950 39-295 (350)
106 3q4u_A Activin receptor type-1 100.0 1E-38 3.5E-43 349.4 22.6 265 675-953 7-300 (301)
107 1t46_A HOMO sapiens V-KIT hard 100.0 1.8E-39 6.1E-44 357.5 16.6 262 675-954 22-306 (313)
108 3a8x_A Protein kinase C IOTA t 100.0 8.6E-39 2.9E-43 355.4 22.2 254 675-950 8-277 (345)
109 2zv2_A Calcium/calmodulin-depe 100.0 1.5E-39 5.3E-44 355.2 15.6 250 674-949 11-293 (298)
110 1opk_A P150, C-ABL, proto-onco 100.0 2.4E-39 8.1E-44 378.1 18.1 258 675-955 219-478 (495)
111 1k9a_A Carboxyl-terminal SRC k 100.0 5.4E-39 1.8E-43 370.9 20.5 251 675-954 192-444 (450)
112 3uc3_A Serine/threonine-protei 100.0 3E-39 1E-43 362.0 17.7 255 675-951 19-277 (361)
113 1o6v_A Internalin A; bacterial 100.0 9.7E-38 3.3E-42 363.1 31.1 347 118-543 43-389 (466)
114 3v8s_A RHO-associated protein 100.0 4.8E-39 1.6E-43 364.2 19.3 255 674-951 67-332 (410)
115 2i0e_A Protein kinase C-beta I 100.0 1E-38 3.5E-43 355.3 21.5 251 673-950 17-278 (353)
116 1kob_A Twitchin; kinase, intra 100.0 6.9E-39 2.4E-43 361.0 19.8 253 675-950 50-306 (387)
117 3gni_B Strad alpha; kinase fol 100.0 1.1E-38 3.8E-43 362.2 21.8 273 675-954 24-341 (389)
118 2v62_A Serine/threonine-protei 100.0 1E-38 3.6E-43 356.1 21.1 279 675-968 36-341 (345)
119 4f0f_A Serine/threonine-protei 100.0 8.8E-39 3E-43 347.2 19.9 253 674-953 17-287 (287)
120 3lzb_A Epidermal growth factor 100.0 3.9E-39 1.3E-43 356.4 17.1 257 675-955 14-278 (327)
121 3gen_A Tyrosine-protein kinase 100.0 3.5E-39 1.2E-43 349.6 16.1 255 675-954 23-279 (283)
122 2wqm_A Serine/threonine-protei 100.0 4.5E-39 1.5E-43 353.7 17.1 272 671-961 27-303 (310)
123 2eva_A TAK1 kinase - TAB1 chim 100.0 5.1E-39 1.7E-43 352.4 17.4 256 675-955 7-263 (307)
124 3oz6_A Mitogen-activated prote 100.0 1.9E-38 6.6E-43 360.0 22.8 273 670-954 3-336 (388)
125 1qcf_A Haematopoetic cell kina 100.0 3.8E-39 1.3E-43 372.9 16.9 259 675-958 187-447 (454)
126 3dtc_A Mitogen-activated prote 100.0 5.5E-39 1.9E-43 345.7 16.7 249 675-953 6-271 (271)
127 3kn6_A Ribosomal protein S6 ki 100.0 1.3E-38 4.6E-43 351.6 20.2 252 681-951 16-273 (325)
128 2pvf_A Fibroblast growth facto 100.0 6.4E-39 2.2E-43 356.3 17.4 262 675-955 34-318 (334)
129 3kfa_A Tyrosine-protein kinase 100.0 5.2E-39 1.8E-43 349.3 15.9 258 674-954 11-270 (288)
130 1ob3_A PFPK5, cell division co 100.0 9.7E-39 3.3E-43 347.0 18.0 262 676-950 2-282 (288)
131 2acx_A G protein-coupled recep 100.0 1.3E-38 4.3E-43 371.5 20.1 253 675-949 183-445 (576)
132 2buj_A Serine/threonine-protei 100.0 8.8E-39 3E-43 352.6 17.8 267 675-959 28-310 (317)
133 2vd5_A DMPK protein; serine/th 100.0 2.1E-38 7.3E-43 359.1 21.4 257 674-951 59-330 (412)
134 3kk8_A Calcium/calmodulin depe 100.0 3.5E-38 1.2E-42 342.0 22.2 252 675-950 5-263 (284)
135 2x4f_A Myosin light chain kina 100.0 1.6E-38 5.6E-43 357.2 19.8 247 680-949 93-343 (373)
136 2yex_A Serine/threonine-protei 100.0 1.6E-38 5.4E-43 343.1 18.9 255 674-950 5-263 (276)
137 3g33_A Cell division protein k 100.0 2.4E-38 8.4E-43 347.4 20.7 267 672-950 5-298 (308)
138 4eut_A Serine/threonine-protei 100.0 1.6E-38 5.3E-43 361.3 19.7 272 676-955 9-309 (396)
139 1mp8_A Focal adhesion kinase 1 100.0 6.6E-39 2.3E-43 347.0 15.8 255 675-954 14-275 (281)
140 3f3z_A Calcium/calmodulin-depe 100.0 3.9E-38 1.3E-42 340.2 21.8 250 675-949 8-262 (277)
141 4e5w_A Tyrosine-protein kinase 100.0 3.3E-39 1.1E-43 353.4 13.5 262 675-953 20-300 (302)
142 3fdn_A Serine/threonine-protei 100.0 3.8E-38 1.3E-42 340.7 21.5 249 674-951 7-260 (279)
143 1nxk_A MAP kinase-activated pr 100.0 2.5E-38 8.6E-43 359.2 20.9 254 675-951 60-324 (400)
144 4fvq_A Tyrosine-protein kinase 100.0 3.6E-39 1.2E-43 350.7 13.4 256 675-960 7-280 (289)
145 2id5_A Lingo-1, leucine rich r 100.0 4.1E-38 1.4E-42 368.1 23.3 347 195-592 13-361 (477)
146 1p4o_A Insulin-like growth fac 100.0 5.8E-39 2E-43 355.0 15.2 264 673-955 22-299 (322)
147 1u5q_A Serine/threonine protei 100.0 1.4E-38 4.9E-43 354.3 18.4 248 676-952 54-309 (348)
148 2a2a_A Death-associated protei 100.0 3.8E-38 1.3E-42 348.0 21.5 253 674-950 10-274 (321)
149 3mdy_A Bone morphogenetic prot 100.0 1.1E-37 3.8E-42 347.0 25.4 267 673-957 34-333 (337)
150 3kmu_A ILK, integrin-linked ki 100.0 1.1E-38 3.6E-43 343.4 16.5 252 674-955 8-270 (271)
151 3e7e_A HBUB1, BUB1A, mitotic c 100.0 4.3E-38 1.5E-42 354.1 22.2 255 675-954 64-338 (365)
152 3ork_A Serine/threonine protei 100.0 1.9E-38 6.4E-43 348.7 18.7 254 675-949 11-274 (311)
153 3is5_A Calcium-dependent prote 100.0 4E-38 1.4E-42 341.5 21.0 253 675-949 21-279 (285)
154 2y94_A 5'-AMP-activated protei 100.0 2.6E-38 8.9E-43 364.6 20.6 248 674-949 14-267 (476)
155 3uzp_A CKI-delta, CKID, casein 100.0 4.4E-38 1.5E-42 343.4 21.3 263 675-956 8-281 (296)
156 3og7_A AKAP9-BRAF fusion prote 100.0 9.8E-39 3.4E-43 347.1 16.1 260 674-955 22-288 (289)
157 3llt_A Serine/threonine kinase 100.0 6.7E-38 2.3E-42 352.1 23.4 263 673-949 32-356 (360)
158 3lxl_A Tyrosine-protein kinase 100.0 4.2E-39 1.5E-43 356.7 13.4 271 675-955 22-303 (327)
159 4agu_A Cyclin-dependent kinase 100.0 3.4E-38 1.2E-42 346.9 20.4 264 675-950 2-286 (311)
160 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1E-38 3.6E-43 368.7 17.0 261 675-960 183-445 (452)
161 3dbq_A Dual specificity protei 100.0 1E-38 3.6E-43 355.7 16.4 251 676-951 9-276 (343)
162 2xir_A Vascular endothelial gr 100.0 3.8E-39 1.3E-43 355.4 12.7 263 675-955 26-310 (316)
163 3op5_A Serine/threonine-protei 100.0 3.2E-38 1.1E-42 354.9 20.4 268 673-954 32-328 (364)
164 3hko_A Calcium/calmodulin-depe 100.0 2.1E-38 7.3E-43 354.0 18.9 263 672-950 22-332 (345)
165 4hgt_A Casein kinase I isoform 100.0 4.1E-38 1.4E-42 343.6 20.7 264 673-955 6-280 (296)
166 2zmd_A Dual specificity protei 100.0 1.8E-38 6.2E-43 359.4 18.4 251 676-951 56-323 (390)
167 3c4z_A Rhodopsin kinase; Ser/T 100.0 4.5E-38 1.5E-42 366.4 22.1 256 675-949 184-449 (543)
168 2eue_A Carbon catabolite derep 100.0 3E-38 1E-42 340.7 19.0 248 674-950 11-264 (275)
169 3cok_A Serine/threonine-protei 100.0 3E-38 1E-42 341.3 19.1 251 675-951 10-265 (278)
170 3t9t_A Tyrosine-protein kinase 100.0 1.5E-38 5.2E-43 341.5 16.6 254 676-954 8-263 (267)
171 2qr7_A Ribosomal protein S6 ki 100.0 2E-38 7E-43 352.0 18.1 256 674-951 20-280 (342)
172 2a19_B Interferon-induced, dou 100.0 1.2E-38 4.2E-43 345.5 15.9 259 670-960 5-279 (284)
173 2ac3_A MAP kinase-interacting 100.0 3.1E-38 1E-42 348.1 19.1 261 675-951 11-298 (316)
174 3dls_A PAS domain-containing s 100.0 1.7E-38 5.9E-43 352.1 17.2 245 673-951 21-277 (335)
175 4ejn_A RAC-alpha serine/threon 100.0 2.1E-38 7.2E-43 366.2 18.6 250 674-950 146-406 (446)
176 3a62_A Ribosomal protein S6 ki 100.0 5.6E-38 1.9E-42 347.1 21.1 250 675-951 16-279 (327)
177 3ttj_A Mitogen-activated prote 100.0 4.2E-38 1.4E-42 363.8 20.7 262 674-950 60-357 (464)
178 3brb_A Proto-oncogene tyrosine 100.0 2.6E-38 9E-43 348.1 18.1 261 675-954 33-307 (313)
179 2r5t_A Serine/threonine-protei 100.0 2.9E-38 9.8E-43 354.1 18.3 244 674-944 36-285 (373)
180 3com_A Serine/threonine-protei 100.0 6.8E-38 2.3E-42 345.0 20.9 255 672-949 25-279 (314)
181 2h34_A Serine/threonine-protei 100.0 2.4E-37 8.1E-42 339.5 24.8 263 673-958 31-299 (309)
182 1mqb_A Ephrin type-A receptor 100.0 3.2E-38 1.1E-42 350.1 17.8 258 675-955 43-309 (333)
183 2w5a_A Serine/threonine-protei 100.0 8.6E-39 3E-43 345.8 12.6 260 675-956 5-275 (279)
184 2yfx_A Tyrosine-protein kinase 100.0 1.4E-38 4.9E-43 352.5 14.6 265 672-955 26-304 (327)
185 3bhy_A Death-associated protei 100.0 9.9E-38 3.4E-42 338.2 20.7 250 676-949 5-266 (283)
186 1fvr_A Tyrosine-protein kinase 100.0 2.5E-38 8.6E-43 350.5 16.1 260 674-955 23-300 (327)
187 3pls_A Macrophage-stimulating 100.0 4.8E-38 1.6E-42 343.5 18.0 257 677-955 22-287 (298)
188 1u59_A Tyrosine-protein kinase 100.0 3.8E-38 1.3E-42 342.1 16.9 255 676-954 9-271 (287)
189 3mtl_A Cell division protein k 100.0 5.5E-38 1.9E-42 346.9 18.3 264 676-951 2-284 (324)
190 1byg_A CSK, protein (C-termina 100.0 1.9E-38 6.6E-43 342.8 14.1 251 675-954 20-272 (278)
191 1xbb_A Tyrosine-protein kinase 100.0 5.7E-38 1.9E-42 341.5 17.7 253 676-953 16-277 (291)
192 1t4h_A Serine/threonine-protei 100.0 1.5E-37 5.3E-42 337.9 21.1 247 677-950 27-284 (290)
193 1cm8_A Phosphorylated MAP kina 100.0 1.2E-37 4.1E-42 349.7 20.9 263 675-954 24-315 (367)
194 3mwu_A Calmodulin-domain prote 100.0 1.6E-37 5.4E-42 363.0 22.6 252 674-950 20-278 (486)
195 2vgo_A Serine/threonine-protei 100.0 2.4E-37 8.1E-42 335.4 22.3 247 675-950 13-264 (284)
196 2id5_A Lingo-1, leucine rich r 100.0 1.6E-37 5.5E-42 363.0 22.5 350 170-571 13-362 (477)
197 1wak_A Serine/threonine-protei 100.0 1E-37 3.5E-42 355.8 20.4 281 658-950 19-393 (397)
198 3cc6_A Protein tyrosine kinase 100.0 4.9E-38 1.7E-42 340.2 16.8 255 675-954 11-272 (281)
199 3gbz_A Kinase, CMGC CDK; ssgci 100.0 2.8E-38 9.5E-43 350.1 14.9 267 672-951 30-321 (329)
200 4aaa_A Cyclin-dependent kinase 100.0 3.9E-38 1.3E-42 349.4 16.1 268 670-949 19-307 (331)
201 2jii_A Serine/threonine-protei 100.0 6E-38 2E-42 351.1 17.6 265 675-955 41-336 (352)
202 2wtk_C Serine/threonine-protei 100.0 4.7E-37 1.6E-41 336.8 24.4 253 674-950 3-265 (305)
203 3lxp_A Non-receptor tyrosine-p 100.0 4E-39 1.4E-43 355.2 7.6 268 678-955 33-310 (318)
204 1x8b_A WEE1HU, WEE1-like prote 100.0 9E-38 3.1E-42 339.5 18.1 249 673-950 8-281 (289)
205 2y7j_A Phosphorylase B kinase 100.0 2.7E-37 9.2E-42 346.8 22.3 254 673-950 91-361 (365)
206 2rku_A Serine/threonine-protei 100.0 2.2E-37 7.5E-42 337.4 21.0 252 672-950 11-267 (294)
207 3c1x_A Hepatocyte growth facto 100.0 2.4E-38 8.3E-43 355.5 13.6 256 677-955 90-355 (373)
208 3rp9_A Mitogen-activated prote 100.0 4.7E-38 1.6E-42 365.0 16.5 193 676-877 53-280 (458)
209 2jam_A Calcium/calmodulin-depe 100.0 1.7E-37 5.7E-42 340.1 19.9 251 675-950 8-263 (304)
210 3a7i_A MST3 kinase, serine/thr 100.0 1.1E-37 3.7E-42 341.5 18.3 250 675-951 21-273 (303)
211 3i6u_A CDS1, serine/threonine- 100.0 7.4E-38 2.5E-42 357.9 17.8 256 672-951 131-402 (419)
212 3sv0_A Casein kinase I-like; t 100.0 3.7E-37 1.3E-41 355.7 23.7 262 675-953 6-276 (483)
213 3gxj_A TGF-beta receptor type- 100.0 5.3E-39 1.8E-43 351.9 7.9 267 676-957 3-299 (303)
214 1qpc_A LCK kinase; alpha beta 100.0 6.3E-38 2.2E-42 339.0 16.1 255 675-954 12-268 (279)
215 3byv_A Rhoptry kinase; malaria 100.0 9.5E-39 3.2E-43 360.9 10.1 244 675-949 72-360 (377)
216 3fme_A Dual specificity mitoge 100.0 4.5E-38 1.5E-42 342.2 14.9 253 675-949 6-267 (290)
217 3lij_A Calcium/calmodulin depe 100.0 2.3E-37 7.8E-42 362.3 21.9 251 674-949 35-292 (494)
218 2ozo_A Tyrosine-protein kinase 100.0 5E-38 1.7E-42 375.4 16.7 259 683-965 343-608 (613)
219 1b6c_B TGF-B superfamily recep 100.0 4.2E-37 1.4E-41 343.1 22.9 271 671-956 37-337 (342)
220 3eqc_A Dual specificity mitoge 100.0 5E-38 1.7E-42 353.1 15.5 266 673-951 30-327 (360)
221 3f66_A Hepatocyte growth facto 100.0 6.5E-38 2.2E-42 342.4 15.9 258 675-955 24-291 (298)
222 3kvw_A DYRK2, dual specificity 100.0 2.5E-37 8.4E-42 354.5 21.2 198 675-884 96-302 (429)
223 3q5i_A Protein kinase; CDPK, m 100.0 3.5E-37 1.2E-41 361.6 22.9 252 674-950 34-303 (504)
224 2owb_A Serine/threonine-protei 100.0 2.3E-37 7.9E-42 343.6 20.2 251 672-949 37-292 (335)
225 3eb0_A Putative uncharacterize 100.0 1.4E-37 4.7E-42 352.1 18.5 265 674-949 5-322 (383)
226 2xrw_A Mitogen-activated prote 100.0 5E-37 1.7E-41 345.8 22.8 259 674-950 23-320 (371)
227 3ll6_A Cyclin G-associated kin 100.0 7.4E-38 2.5E-42 348.4 15.9 255 676-955 28-308 (337)
228 3n9x_A Phosphotransferase; mal 100.0 3.6E-37 1.2E-41 353.9 22.0 198 676-882 26-253 (432)
229 2h8h_A Proto-oncogene tyrosine 100.0 5.2E-38 1.8E-42 370.1 15.4 259 675-958 266-526 (535)
230 3g2f_A Bone morphogenetic prot 100.0 1.1E-37 3.7E-42 346.9 17.1 268 674-957 11-320 (336)
231 2w1i_A JAK2; chromosomal rearr 100.0 2.3E-38 7.8E-43 350.5 11.6 263 675-954 40-321 (326)
232 3nsz_A CK II alpha, casein kin 100.0 3E-37 1E-41 342.5 20.6 261 675-950 35-321 (330)
233 3lm5_A Serine/threonine-protei 100.0 1.4E-37 4.6E-42 344.3 17.6 257 673-951 25-290 (327)
234 2h6d_A 5'-AMP-activated protei 100.0 4.5E-37 1.5E-41 331.8 21.0 248 674-949 9-262 (276)
235 2r3i_A Cell division protein k 100.0 2E-37 6.9E-42 338.7 18.3 265 675-950 2-285 (299)
236 3mi9_A Cell division protein k 100.0 3.5E-37 1.2E-41 344.9 20.6 268 675-952 16-315 (351)
237 3nyv_A Calmodulin-domain prote 100.0 1.5E-37 5E-42 363.5 18.2 253 674-951 24-284 (484)
238 2clq_A Mitogen-activated prote 100.0 4.2E-37 1.4E-41 335.5 20.6 254 677-951 23-281 (295)
239 1vzo_A Ribosomal protein S6 ki 100.0 1.5E-37 5.3E-42 347.6 17.2 257 674-952 52-325 (355)
240 2x7f_A TRAF2 and NCK-interacti 100.0 1.5E-37 5.2E-42 344.2 16.8 254 673-949 21-287 (326)
241 3q60_A ROP5B; pseudokinase, tr 100.0 6.9E-38 2.4E-42 353.2 14.2 253 676-949 62-353 (371)
242 1ua2_A CAK, cell division prot 100.0 5.1E-37 1.8E-41 342.5 21.0 267 674-951 8-294 (346)
243 1u46_A ACK-1, activated CDC42 100.0 8.8E-38 3E-42 340.1 14.1 260 675-957 17-286 (291)
244 2j7t_A Serine/threonine-protei 100.0 1.8E-37 6E-42 339.7 16.5 255 673-950 16-277 (302)
245 3pfq_A PKC-B, PKC-beta, protei 100.0 4.7E-37 1.6E-41 370.3 21.5 250 673-949 338-598 (674)
246 3an0_A Dual specificity mitoge 100.0 1E-37 3.4E-42 347.8 14.5 254 674-949 49-311 (340)
247 2ycf_A Serine/threonine-protei 100.0 3.4E-37 1.2E-41 340.6 18.4 254 672-949 6-275 (322)
248 3rgf_A Cyclin-dependent kinase 100.0 3.5E-37 1.2E-41 351.6 18.7 271 677-952 21-337 (405)
249 3qyz_A Mitogen-activated prote 100.0 5.7E-37 1.9E-41 344.7 20.2 264 676-951 27-316 (364)
250 1phk_A Phosphorylase kinase; g 100.0 1.1E-36 3.9E-41 332.5 21.9 253 674-950 15-285 (298)
251 1j1b_A Glycogen synthase kinas 100.0 4.8E-37 1.6E-41 351.3 19.3 264 676-950 54-338 (420)
252 4fl3_A Tyrosine-protein kinase 100.0 2.5E-37 8.4E-42 370.2 17.6 247 682-953 375-629 (635)
253 2fst_X Mitogen-activated prote 100.0 2.8E-37 9.6E-42 346.3 16.8 259 675-950 28-313 (367)
254 3o6n_A APL1; leucine-rich repe 100.0 2.2E-36 7.6E-41 343.5 24.3 334 193-592 45-379 (390)
255 2vx3_A Dual specificity tyrosi 100.0 2.7E-36 9.4E-41 341.4 24.6 204 671-884 49-261 (382)
256 2vwi_A Serine/threonine-protei 100.0 8.4E-38 2.9E-42 342.4 11.8 264 675-949 14-288 (303)
257 3e3p_A Protein kinase, putativ 100.0 1E-36 3.5E-41 342.6 20.8 272 672-950 19-316 (360)
258 3o6n_A APL1; leucine-rich repe 100.0 2.4E-36 8.1E-41 343.3 23.4 348 50-470 3-352 (390)
259 1z57_A Dual specificity protei 100.0 2.4E-36 8.1E-41 336.5 22.9 263 673-949 11-329 (339)
260 3aln_A Dual specificity mitoge 100.0 6.5E-37 2.2E-41 339.2 17.2 257 675-949 21-286 (327)
261 1zy4_A Serine/threonine-protei 100.0 1.1E-36 3.7E-41 333.5 18.5 255 674-950 4-285 (303)
262 4exu_A Mitogen-activated prote 100.0 1.5E-36 5.2E-41 341.9 19.7 259 675-951 41-326 (371)
263 2wei_A Calmodulin-domain prote 100.0 2.2E-36 7.6E-41 328.2 20.3 253 672-949 18-277 (287)
264 3oja_B Anopheles plasmodium-re 100.0 3.6E-36 1.2E-40 360.7 24.1 334 193-592 51-385 (597)
265 2b9h_A MAP kinase FUS3, mitoge 100.0 1.9E-36 6.5E-41 339.4 19.8 265 674-950 9-307 (353)
266 4e7w_A Glycogen synthase kinas 100.0 1E-36 3.5E-41 345.7 17.5 268 675-954 39-329 (394)
267 2pml_X PFPK7, Ser/Thr protein 100.0 3.2E-37 1.1E-41 344.9 12.9 264 674-950 29-324 (348)
268 1blx_A Cyclin-dependent kinase 100.0 3.4E-36 1.2E-40 333.3 20.2 269 674-954 9-304 (326)
269 2eu9_A Dual specificity protei 100.0 9.2E-36 3.1E-40 334.1 23.7 265 671-949 14-334 (355)
270 3cek_A Dual specificity protei 100.0 1.4E-36 4.8E-41 334.2 16.7 252 675-951 27-295 (313)
271 3fhr_A MAP kinase-activated pr 100.0 1.8E-36 6.3E-41 336.3 17.5 258 673-951 25-290 (336)
272 2i6l_A Mitogen-activated prote 100.0 2.7E-36 9.3E-41 333.1 18.5 263 675-949 10-306 (320)
273 3pg1_A Mitogen-activated prote 100.0 2.4E-36 8.1E-41 339.8 17.6 265 673-951 19-319 (362)
274 1q8y_A SR protein kinase; tran 100.0 9.1E-36 3.1E-40 336.6 22.1 264 675-951 18-336 (373)
275 2y4i_B KSR2, HKSR2, kinase sup 100.0 3.9E-37 1.3E-41 339.7 9.4 257 675-957 32-304 (319)
276 3a99_A Proto-oncogene serine/t 100.0 1.2E-36 4E-41 335.7 12.6 244 672-950 39-295 (320)
277 3coi_A Mitogen-activated prote 100.0 5.8E-36 2E-40 335.2 18.4 257 676-950 24-307 (353)
278 2j0j_A Focal adhesion kinase 1 100.0 2.4E-36 8.4E-41 362.9 16.2 254 675-953 389-649 (656)
279 4fcg_A Uncharacterized protein 100.0 5E-36 1.7E-40 330.9 17.3 280 27-326 23-314 (328)
280 3oja_B Anopheles plasmodium-re 100.0 2.3E-35 7.7E-40 353.7 23.9 350 46-471 5-359 (597)
281 2iwi_A Serine/threonine-protei 100.0 3.8E-36 1.3E-40 330.7 14.1 244 673-951 28-286 (312)
282 2dyl_A Dual specificity mitoge 100.0 7.3E-36 2.5E-40 329.4 15.9 252 674-949 23-284 (318)
283 2rio_A Serine/threonine-protei 100.0 1.4E-35 4.8E-40 340.6 16.4 256 677-950 16-297 (434)
284 3qa8_A MGC80376 protein; kinas 100.0 4.8E-36 1.6E-40 352.6 10.8 263 672-946 10-295 (676)
285 3p23_A Serine/threonine-protei 100.0 2.3E-35 7.9E-40 337.6 14.1 250 676-949 24-284 (432)
286 3uqc_A Probable conserved tran 100.0 8.4E-35 2.9E-39 314.6 16.6 231 675-957 30-267 (286)
287 4fmz_A Internalin; leucine ric 100.0 9.7E-34 3.3E-38 316.5 24.4 304 192-542 43-346 (347)
288 4fmz_A Internalin; leucine ric 100.0 2.5E-33 8.5E-38 313.2 26.9 305 118-493 41-345 (347)
289 3m2w_A MAP kinase-activated pr 100.0 4.6E-34 1.6E-38 311.8 20.1 236 674-951 15-259 (299)
290 2pzi_A Probable serine/threoni 100.0 2.7E-34 9.2E-39 349.1 17.2 238 674-952 78-325 (681)
291 3dzo_A Rhoptry kinase domain; 100.0 3E-34 1E-38 327.3 12.1 242 676-948 78-363 (413)
292 2ft3_A Biglycan; proteoglycan, 100.0 2.4E-32 8.3E-37 302.9 24.0 287 195-540 35-331 (332)
293 2ft3_A Biglycan; proteoglycan, 100.0 4E-32 1.4E-36 301.1 23.5 287 218-563 34-331 (332)
294 2vuw_A Serine/threonine-protei 100.0 6.9E-34 2.4E-38 316.0 8.0 243 675-949 19-332 (336)
295 1xku_A Decorin; proteoglycan, 100.0 6.6E-32 2.3E-36 299.2 23.7 274 218-540 53-330 (330)
296 1xku_A Decorin; proteoglycan, 100.0 2.2E-31 7.4E-36 295.1 26.2 284 59-348 29-330 (330)
297 1ogq_A PGIP-2, polygalacturona 100.0 1.3E-32 4.6E-37 301.6 15.5 250 217-516 50-302 (313)
298 1z7x_W Ribonuclease inhibitor; 100.0 5.1E-36 1.8E-40 348.9 -14.6 386 121-569 3-444 (461)
299 1z7x_W Ribonuclease inhibitor; 100.0 2.8E-35 9.7E-40 342.7 -8.9 260 74-352 4-299 (461)
300 2z66_A Variable lymphocyte rec 100.0 2E-30 6.7E-35 284.1 16.2 254 58-327 4-262 (306)
301 3ogk_B Coronatine-insensitive 100.0 6.3E-33 2.1E-37 333.7 -4.2 431 60-544 41-528 (592)
302 4fcg_A Uncharacterized protein 100.0 2.1E-31 7.3E-36 293.8 8.0 288 31-350 12-314 (328)
303 2z80_A TOLL-like receptor 2, v 100.0 1.6E-30 5.5E-35 290.9 14.6 281 58-354 27-318 (353)
304 3ogk_B Coronatine-insensitive 100.0 4.2E-33 1.4E-37 335.2 -8.1 421 73-539 73-548 (592)
305 2z66_A Variable lymphocyte rec 100.0 1.4E-29 4.8E-34 277.3 14.6 185 385-570 78-266 (306)
306 2z80_A TOLL-like receptor 2, v 100.0 1.1E-29 3.6E-34 284.2 13.1 280 240-570 30-319 (353)
307 3g06_A SSPH2 (leucine-rich rep 100.0 1.1E-28 3.7E-33 292.5 16.7 292 45-429 7-304 (622)
308 3zyj_A Leucine-rich repeat-con 100.0 3.7E-28 1.3E-32 280.2 20.5 233 314-572 65-299 (440)
309 3zyi_A Leucine-rich repeat-con 100.0 4.4E-28 1.5E-32 280.6 20.4 252 267-571 56-309 (452)
310 1ozn_A Reticulon 4 receptor; N 100.0 1.3E-27 4.6E-32 258.6 19.6 254 245-526 15-269 (285)
311 1wwl_A Monocyte differentiatio 99.9 5.6E-29 1.9E-33 272.9 6.1 204 142-350 41-266 (312)
312 1wwl_A Monocyte differentiatio 99.9 9.6E-29 3.3E-33 271.1 7.7 265 50-350 21-309 (312)
313 1ozn_A Reticulon 4 receptor; N 99.9 1.2E-27 4.3E-32 258.8 16.3 253 76-333 14-268 (285)
314 3zyj_A Leucine-rich repeat-con 99.9 5.7E-27 2E-31 270.2 21.2 246 196-494 46-292 (440)
315 3g06_A SSPH2 (leucine-rich rep 99.9 1.3E-26 4.4E-31 274.7 23.9 263 218-572 41-304 (622)
316 3zyi_A Leucine-rich repeat-con 99.9 6.4E-27 2.2E-31 270.8 20.8 110 383-494 194-303 (452)
317 3o53_A Protein LRIM1, AGAP0063 99.9 1.9E-28 6.5E-33 269.4 6.7 266 195-522 12-280 (317)
318 3o53_A Protein LRIM1, AGAP0063 99.9 3E-28 1E-32 267.7 6.8 259 74-346 11-271 (317)
319 2p1m_B Transport inhibitor res 99.9 4.1E-30 1.4E-34 309.3 -12.5 429 60-542 34-519 (594)
320 4azs_A Methyltransferase WBDD; 99.9 7.6E-28 2.6E-32 283.6 5.5 185 683-881 241-438 (569)
321 2o6q_A Variable lymphocyte rec 99.9 9.2E-26 3.2E-30 241.8 20.6 215 59-302 3-218 (270)
322 3oja_A Leucine-rich immune mol 99.9 1.5E-27 5.2E-32 277.4 5.4 169 385-560 99-270 (487)
323 3oja_A Leucine-rich immune mol 99.9 6.8E-27 2.3E-31 271.9 10.0 237 95-345 32-270 (487)
324 2p1m_B Transport inhibitor res 99.9 9.2E-29 3.2E-33 297.5 -9.7 415 100-566 46-520 (594)
325 1p9a_G Platelet glycoprotein I 99.9 4.5E-25 1.5E-29 238.5 18.3 207 333-570 6-213 (290)
326 2o6q_A Variable lymphocyte rec 99.9 1.1E-24 3.8E-29 233.5 20.4 206 338-570 17-223 (270)
327 2z62_A TOLL-like receptor 4, v 99.9 3.5E-25 1.2E-29 238.3 16.4 190 380-570 47-242 (276)
328 2z62_A TOLL-like receptor 4, v 99.9 1.6E-24 5.6E-29 233.1 19.2 208 314-546 29-241 (276)
329 3rfs_A Internalin B, repeat mo 99.9 5.5E-25 1.9E-29 236.0 14.5 228 312-575 18-245 (272)
330 3rfs_A Internalin B, repeat mo 99.9 2.2E-24 7.4E-29 231.4 14.1 224 97-357 19-242 (272)
331 2ast_B S-phase kinase-associat 99.9 9.8E-26 3.4E-30 250.3 3.7 265 60-334 36-314 (336)
332 3en9_A Glycoprotease, O-sialog 99.9 9.5E-25 3.3E-29 255.8 9.1 184 679-882 339-539 (540)
333 3goz_A Leucine-rich repeat-con 99.9 7.6E-25 2.6E-29 245.4 6.1 261 78-359 3-306 (362)
334 1p9a_G Platelet glycoprotein I 99.9 4.8E-23 1.6E-27 222.6 19.6 202 117-325 6-207 (290)
335 3m19_A Variable lymphocyte rec 99.9 6.2E-23 2.1E-27 217.2 16.7 177 388-567 17-194 (251)
336 3goz_A Leucine-rich repeat-con 99.9 9.7E-25 3.3E-29 244.5 2.5 262 221-522 2-301 (362)
337 2ast_B S-phase kinase-associat 99.9 3.5E-24 1.2E-28 237.8 5.8 252 98-357 48-313 (336)
338 4glp_A Monocyte differentiatio 99.9 1.1E-22 3.8E-27 222.6 16.9 222 98-350 65-307 (310)
339 3m19_A Variable lymphocyte rec 99.9 3.1E-22 1E-26 211.9 18.5 178 367-546 19-196 (251)
340 4glp_A Monocyte differentiatio 99.9 3.1E-23 1.1E-27 227.0 10.6 226 74-326 65-307 (310)
341 2xwt_C Thyrotropin receptor; s 99.9 1.9E-22 6.4E-27 211.9 15.3 177 98-278 32-218 (239)
342 2ca6_A RAN GTPase-activating p 99.9 1.4E-24 4.7E-29 245.8 -1.6 246 89-354 24-320 (386)
343 2xwt_C Thyrotropin receptor; s 99.9 3.4E-22 1.1E-26 210.0 14.5 196 266-491 32-236 (239)
344 2ca6_A RAN GTPase-activating p 99.9 2.5E-24 8.5E-29 243.7 -2.3 240 140-402 28-320 (386)
345 3cvr_A Invasion plasmid antige 99.9 5E-23 1.7E-27 240.8 8.3 220 45-312 28-253 (571)
346 1h6u_A Internalin H; cell adhe 99.9 7.5E-22 2.6E-26 215.5 16.6 194 93-302 37-230 (308)
347 1h6u_A Internalin H; cell adhe 99.9 1.3E-21 4.5E-26 213.5 16.3 211 99-327 21-231 (308)
348 4ay9_X Follicle-stimulating ho 99.8 1.5E-20 5E-25 209.4 18.3 217 100-344 12-233 (350)
349 1zar_A RIO2 kinase; serine kin 99.8 1.1E-21 3.9E-26 210.3 8.5 142 677-854 91-252 (282)
350 4ay9_X Follicle-stimulating ho 99.8 3E-20 1E-24 206.9 19.2 102 386-492 155-257 (350)
351 2o6s_A Variable lymphocyte rec 99.8 2.5E-20 8.5E-25 191.1 14.1 179 388-575 10-188 (208)
352 4b8c_D Glucose-repressible alc 99.8 1.4E-21 4.8E-26 237.5 5.6 233 29-275 130-369 (727)
353 2o6s_A Variable lymphocyte rec 99.8 2.4E-20 8.1E-25 191.3 13.5 162 385-553 28-189 (208)
354 2v70_A SLIT-2, SLIT homolog 2 99.8 1.2E-20 4E-25 195.0 10.7 158 434-592 33-194 (220)
355 3cvr_A Invasion plasmid antige 99.8 2.3E-20 7.9E-25 218.3 14.4 189 122-338 60-255 (571)
356 2xot_A Amphoterin-induced prot 99.8 2.5E-20 8.7E-25 208.3 13.0 182 387-571 20-208 (361)
357 2v9t_B SLIT homolog 2 protein 99.8 2.6E-20 9E-25 192.4 11.5 140 433-572 32-172 (220)
358 1h6t_A Internalin B; cell adhe 99.8 7.1E-20 2.4E-24 197.9 12.2 171 94-302 43-213 (291)
359 3e6j_A Variable lymphocyte rec 99.8 3.5E-19 1.2E-23 185.2 16.7 158 58-232 16-174 (229)
360 3e6j_A Variable lymphocyte rec 99.8 5.9E-19 2E-23 183.5 17.9 136 433-569 40-176 (229)
361 2v70_A SLIT-2, SLIT homolog 2 99.8 1.2E-19 4.2E-24 187.3 12.6 157 387-546 13-170 (220)
362 1h6t_A Internalin B; cell adhe 99.8 1.1E-19 3.7E-24 196.5 12.6 168 73-254 46-213 (291)
363 1m9s_A Internalin B; cell inva 99.8 1.3E-19 4.4E-24 214.6 14.1 188 76-279 24-211 (605)
364 1m9s_A Internalin B; cell inva 99.8 2.4E-19 8.1E-24 212.3 14.3 204 96-315 20-223 (605)
365 2v9t_B SLIT homolog 2 protein 99.8 3.1E-19 1.1E-23 184.2 13.1 154 387-543 13-166 (220)
366 2xot_A Amphoterin-induced prot 99.8 3.2E-19 1.1E-23 199.4 10.9 177 340-543 21-203 (361)
367 1dce_A Protein (RAB geranylger 99.8 9E-20 3.1E-24 214.7 2.6 216 310-559 346-567 (567)
368 1xeu_A Internalin C; cellular 99.8 1.1E-18 3.8E-23 185.4 9.8 171 95-280 17-187 (263)
369 4ezg_A Putative uncharacterize 99.7 4.2E-18 1.4E-22 172.7 12.0 155 380-542 39-194 (197)
370 1w8a_A SLIT protein; signaling 99.7 4.4E-18 1.5E-22 171.6 12.0 112 434-545 30-142 (192)
371 1dce_A Protein (RAB geranylger 99.7 8.6E-20 2.9E-24 214.9 -0.7 203 334-570 346-551 (567)
372 1w8a_A SLIT protein; signaling 99.7 1.6E-18 5.3E-23 174.9 8.1 154 436-592 11-167 (192)
373 1xeu_A Internalin C; cellular 99.7 2.5E-18 8.4E-23 182.7 9.9 168 74-256 20-187 (263)
374 4ezg_A Putative uncharacterize 99.7 1.1E-17 3.8E-22 169.5 12.1 153 118-302 41-194 (197)
375 4b8c_D Glucose-repressible alc 99.7 1.8E-18 6.1E-23 210.3 6.9 154 376-539 215-369 (727)
376 1zth_A RIO1 serine protein kin 99.7 1.6E-17 5.6E-22 175.8 10.3 136 678-829 49-219 (258)
377 2wfh_A SLIT homolog 2 protein 99.7 2.7E-17 9.2E-22 165.8 9.7 154 436-593 13-168 (193)
378 3sb4_A Hypothetical leucine ri 99.7 1.1E-17 3.8E-22 184.4 6.3 102 432-535 225-327 (329)
379 3sb4_A Hypothetical leucine ri 99.7 2.3E-17 7.9E-22 181.8 7.6 221 264-511 100-327 (329)
380 2ell_A Acidic leucine-rich nuc 99.7 1.6E-16 5.4E-21 156.6 12.3 135 95-230 22-160 (168)
381 2ell_A Acidic leucine-rich nuc 99.7 4E-16 1.4E-20 153.7 12.2 133 384-518 23-160 (168)
382 2je0_A Acidic leucine-rich nuc 99.7 2.2E-16 7.7E-21 152.0 10.2 130 95-225 15-148 (149)
383 2wfh_A SLIT homolog 2 protein 99.6 7.6E-16 2.6E-20 155.1 11.9 111 433-544 31-141 (193)
384 2o6r_A Variable lymphocyte rec 99.6 9.1E-16 3.1E-20 152.5 11.9 132 435-569 9-141 (177)
385 2je0_A Acidic leucine-rich nuc 99.6 7.7E-16 2.6E-20 148.3 10.3 128 384-513 16-148 (149)
386 2o6r_A Variable lymphocyte rec 99.6 2.2E-15 7.4E-20 149.8 12.2 132 412-546 10-141 (177)
387 4fdw_A Leucine rich hypothetic 99.6 3.6E-14 1.2E-18 159.5 17.2 65 475-542 294-358 (401)
388 4gyi_A RIO2 kinase; protein ki 99.6 1.1E-15 3.7E-20 167.4 4.0 136 678-830 97-266 (397)
389 4fdw_A Leucine rich hypothetic 99.6 4.4E-14 1.5E-18 158.8 17.3 266 240-542 112-383 (401)
390 1a9n_A U2A', U2A'; complex (nu 99.5 1.9E-14 6.5E-19 142.7 10.3 133 92-230 14-153 (176)
391 1a9n_A U2A', U2A'; complex (nu 99.5 1.5E-14 5.1E-19 143.5 9.5 134 380-518 14-153 (176)
392 1ds9_A Outer arm dynein; leuci 99.5 1.8E-16 6E-21 160.8 -4.9 133 94-231 15-154 (198)
393 1ds9_A Outer arm dynein; leuci 99.5 4.7E-16 1.6E-20 157.7 -2.3 136 142-283 16-158 (198)
394 4fs7_A Uncharacterized protein 99.5 1.9E-13 6.4E-18 154.5 18.6 237 259-533 156-392 (394)
395 3g39_A Variable lymphocyte rec 99.5 5.4E-14 1.9E-18 138.3 10.0 105 435-542 11-115 (170)
396 4fs7_A Uncharacterized protein 99.5 7.8E-13 2.7E-17 149.4 19.1 122 380-509 271-392 (394)
397 3g39_A Variable lymphocyte rec 99.5 1.3E-13 4.6E-18 135.5 9.8 109 458-569 10-119 (170)
398 2r9u_A Variable lymphocyte rec 99.5 1.6E-13 5.4E-18 135.5 10.1 104 436-542 15-118 (174)
399 2r9u_A Variable lymphocyte rec 99.4 2.5E-13 8.5E-18 134.0 10.1 108 459-569 14-122 (174)
400 2ifg_A High affinity nerve gro 99.4 1.3E-12 4.4E-17 145.0 10.6 107 462-570 13-121 (347)
401 3un9_A NLR family member X1; l 99.3 2.4E-14 8.2E-19 159.4 -7.7 159 120-278 71-252 (372)
402 3un9_A NLR family member X1; l 99.3 4.3E-14 1.5E-18 157.4 -6.8 167 96-262 71-260 (372)
403 2ifg_A High affinity nerve gro 99.3 4.2E-12 1.4E-16 140.8 7.9 131 437-570 12-146 (347)
404 4gt6_A Cell surface protein; l 99.2 4E-10 1.4E-14 127.1 22.0 110 379-492 259-368 (394)
405 4gt6_A Cell surface protein; l 99.2 2.9E-10 9.9E-15 128.2 18.3 335 157-541 52-390 (394)
406 2ra8_A Uncharacterized protein 99.1 1.6E-11 5.5E-16 135.3 4.9 181 72-254 106-320 (362)
407 3tm0_A Aminoglycoside 3'-phosp 99.1 2.2E-10 7.5E-15 121.5 10.4 143 673-827 11-212 (263)
408 1nd4_A Aminoglycoside 3'-phosp 99.0 9.6E-10 3.3E-14 116.3 9.0 136 677-827 21-213 (264)
409 4h09_A Hypothetical leucine ri 98.9 2.7E-08 9.3E-13 111.5 20.6 130 380-513 212-341 (379)
410 4h09_A Hypothetical leucine ri 98.9 4.4E-08 1.5E-12 109.7 21.1 318 137-506 39-357 (379)
411 2ra8_A Uncharacterized protein 98.9 6.3E-10 2.1E-14 122.6 4.4 137 187-326 166-320 (362)
412 3rw6_A Nuclear RNA export fact 98.9 3.1E-11 1.1E-15 125.9 -6.1 161 60-247 77-257 (267)
413 3sg8_A APH(2'')-ID; antibiotic 98.8 3.2E-09 1.1E-13 115.0 7.3 188 681-882 25-288 (304)
414 3dxp_A Putative acyl-COA dehyd 98.8 1.3E-08 4.4E-13 113.1 10.3 140 680-828 42-248 (359)
415 3r70_A Aminoglycoside phosphot 98.5 3.7E-07 1.3E-11 99.5 12.0 137 677-829 38-238 (320)
416 1io0_A Tropomodulin; LRR prote 98.5 8.9E-09 3E-13 102.3 -1.8 122 88-230 27-164 (185)
417 1io0_A Tropomodulin; LRR prote 98.4 7.9E-08 2.7E-12 95.4 1.6 62 217-278 93-164 (185)
418 3rw6_A Nuclear RNA export fact 98.3 1E-07 3.4E-12 99.4 1.6 80 454-535 167-257 (267)
419 4gkh_A Aminoglycoside 3'-phosp 98.3 3.5E-06 1.2E-10 89.2 12.9 135 683-827 31-222 (272)
420 3tdw_A Gentamicin resistance p 98.3 4.6E-06 1.6E-10 89.9 13.2 75 681-760 24-102 (306)
421 3d1u_A Putative fructosamine-3 98.1 1.2E-05 4.1E-10 85.5 11.6 74 680-758 19-97 (288)
422 3ovc_A Hygromycin-B 4-O-kinase 97.9 4.6E-05 1.6E-09 84.0 12.4 76 679-759 44-122 (362)
423 3e4g_A ATP synthase subunit S, 97.9 6E-06 2.1E-10 79.5 3.3 82 194-275 62-149 (176)
424 3e4g_A ATP synthase subunit S, 97.8 7.9E-06 2.7E-10 78.7 3.8 82 170-252 63-150 (176)
425 2q83_A YTAA protein; 2635576, 97.7 0.00017 5.8E-09 79.0 13.3 142 682-827 38-251 (346)
426 3ats_A Putative uncharacterize 97.7 3.9E-05 1.3E-09 84.7 8.0 79 681-759 25-121 (357)
427 2olc_A MTR kinase, methylthior 97.7 0.00016 5.3E-09 81.2 11.7 74 681-756 35-120 (397)
428 3jr1_A Putative fructosamine-3 97.3 0.0047 1.6E-07 66.0 16.8 141 680-824 40-232 (312)
429 1pgv_A TMD-1, tropomodulin TMD 97.1 0.00019 6.4E-09 70.5 2.6 40 118-157 38-83 (197)
430 1pgv_A TMD-1, tropomodulin TMD 97.1 0.00014 4.7E-09 71.5 1.3 43 189-231 66-112 (197)
431 3rfe_A Platelet glycoprotein I 97.0 0.00073 2.5E-08 62.0 6.1 61 509-571 12-74 (130)
432 3f7w_A Putative fructosamine-3 97.0 0.0024 8.1E-08 67.8 11.0 76 678-758 17-97 (288)
433 2pyw_A Uncharacterized protein 97.0 0.0027 9.3E-08 71.5 11.2 77 797-877 231-312 (420)
434 3dxq_A Choline/ethanolamine ki 96.8 0.0031 1.1E-07 67.4 9.7 70 681-758 23-95 (301)
435 1zyl_A Hypothetical protein YI 96.8 0.0087 3E-07 64.7 12.8 142 682-827 32-222 (328)
436 2ppq_A HSK, HK, homoserine kin 96.7 0.0048 1.6E-07 66.6 10.2 145 681-827 27-216 (322)
437 1nw1_A Choline kinase (49.2 KD 96.5 0.0052 1.8E-07 69.1 9.2 73 682-758 79-159 (429)
438 2yle_A Protein spire homolog 1 96.4 0.025 8.5E-07 55.7 11.7 103 756-880 33-135 (229)
439 3feg_A Choline/ethanolamine ki 96.3 0.0096 3.3E-07 65.4 9.4 142 682-827 56-253 (379)
440 3rfe_A Platelet glycoprotein I 96.1 0.01 3.4E-07 54.3 7.2 56 437-494 12-68 (130)
441 3csv_A Aminoglycoside phosphot 96.1 0.026 8.8E-07 61.1 11.4 143 682-828 24-217 (333)
442 2qg7_A Ethanolamine kinase PV0 95.9 0.02 6.7E-07 64.7 9.8 74 681-758 113-188 (458)
443 3c5i_A Choline kinase; choline 95.6 0.014 4.8E-07 64.3 6.9 73 682-758 39-121 (369)
444 3i1a_A Spectinomycin phosphotr 95.1 0.08 2.7E-06 57.3 10.6 68 685-758 32-108 (339)
445 3f2s_A CK, chetk-alpha, cholin 92.7 0.46 1.6E-05 52.2 10.7 142 682-827 58-279 (401)
446 3mes_A Choline kinase; malaria 92.3 0.39 1.3E-05 53.4 9.6 73 682-758 76-157 (424)
447 3g15_A CK, chetk-alpha, cholin 87.0 1.7 6E-05 47.9 9.6 30 799-828 245-280 (401)
448 4ann_A ESSB; membrane protein, 77.8 5.8 0.0002 38.9 7.9 118 729-884 43-160 (215)
449 3cxl_A N-chimerin; SH2, RHO-GA 75.9 0.35 1.2E-05 54.6 -1.6 60 679-741 145-214 (463)
450 4ano_A ESSB; membrane protein, 75.5 11 0.00038 37.1 9.2 116 729-883 48-164 (219)
451 3ls8_A Phosphatidylinositol 3- 47.0 2.5E+02 0.0084 32.2 14.6 86 734-827 402-501 (614)
452 2jwa_A Receptor tyrosine-prote 42.3 19 0.00065 25.1 2.8 9 619-627 14-22 (44)
453 2k1k_A Ephrin type-A receptor 33.1 34 0.0012 23.1 2.8 11 619-629 13-23 (38)
454 2x6h_A GH13170P, VPS34, phosph 31.4 2.1E+02 0.0071 33.4 11.0 45 776-827 529-575 (696)
455 3ox7_P MH027; urokinase-type p 27.0 20 0.00068 20.0 0.7 10 58-67 5-14 (23)
456 2lz0_A Uncharacterized protein 22.8 66 0.0023 27.0 3.6 46 493-539 8-53 (100)
457 2lz0_A Uncharacterized protein 22.5 1.1E+02 0.0038 25.6 5.0 39 426-465 13-51 (100)
458 1cja_A Protein (actin-fragmin 22.4 2E+02 0.0068 30.1 7.7 140 678-828 71-237 (342)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.6e-77 Score=740.49 Aligned_cols=560 Identities=35% Similarity=0.531 Sum_probs=458.8
Q ss_pred CCCchHHHHHHHHHHHhcCCCcccccCCCCCCCCCCCcceeeeCCCCCceEEEeecCCCCCcc---cc------------
Q 002063 26 SLSLNVETQALIQFKSKLKDPHGVLDSWKESADSPCGFSGITCDSVTGRVTEISFDNKSLSGE---IS------------ 90 (973)
Q Consensus 26 ~~~~~~~~~aLl~~k~~~~d~~~~l~~W~~~~~~~c~w~gv~C~~~~~~v~~l~l~~~~l~~~---~~------------ 90 (973)
+.+.++|++|||+||+++.||. .+++|+.+ .+||.|.||+|+ ++||++|+|++.+++|. ++
T Consensus 7 ~~~~~~~~~all~~k~~~~~~~-~l~~W~~~-~~~C~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l 82 (768)
T 3rgz_A 7 SQSLYREIHQLISFKDVLPDKN-LLPDWSSN-KNPCTFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESL 82 (768)
T ss_dssp -CCHHHHHHHHHHHHTTCSCTT-SSTTCCTT-SCGGGSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEE
T ss_pred ccCCHHHHHHHHHHHhhCCCcc-cccCCCCC-CCCcCCcceEEC--CCcEEEEECCCCCcCCccCccChhHhccCccccc
Confidence 3456889999999999999998 89999855 468999999998 68999999999999887 44
Q ss_pred -----------ccccCCCCCcEEeCCCCcccCccCc--cccCCCCCcEEEecCCcccCCCCC------------------
Q 002063 91 -----------SSISALQSLTVLSLPFNVLSGKLPL--ELSNCSNLKVLNVTGNAMVGSVPD------------------ 139 (973)
Q Consensus 91 -----------~~l~~l~~L~~L~Ls~n~l~~~~p~--~l~~l~~L~~L~L~~n~l~~~~~~------------------ 139 (973)
+.++.+++|++|+|++|.++|.+|. .|+++++|++|+|++|.+.+..+.
T Consensus 83 ~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~ 162 (768)
T 3rgz_A 83 FLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANS 162 (768)
T ss_dssp ECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSC
T ss_pred CCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCc
Confidence 4677888899999999998888887 788888888888877776543331
Q ss_pred ---------------------------------cCCCCCCCEEeccCcccCCccccccccccccceEEccCCcCCCCCCc
Q 002063 140 ---------------------------------LSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIP 186 (973)
Q Consensus 140 ---------------------------------l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip 186 (973)
+..+++|++|+|++|.+++.+|. +.++++|++|++++|.++. .+|
T Consensus 163 l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~-~~~ 240 (768)
T 3rgz_A 163 ISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSG-DFS 240 (768)
T ss_dssp CEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCS-CHH
T ss_pred cCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCC-ccc
Confidence 13456677777777777776666 7888888888888887763 356
Q ss_pred ccccCCCCCCEEEcccccCCCC----------------------CChhhhcc-CCCCeeeccccccccccchhhhccccc
Q 002063 187 ESIGNLKNLTYLFLAHCNLRGR----------------------IPESISEL-RELGTLDICRNKISGEFPRSIRKLQKL 243 (973)
Q Consensus 187 ~~~~~l~~L~~L~L~~n~l~~~----------------------~p~~l~~l-~~L~~L~L~~n~l~~~~p~~l~~l~~L 243 (973)
..++++++|++|+|++|++++. +|..+..+ ++|++|+|++|++++.+|..++++++|
T Consensus 241 ~~l~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L 320 (768)
T 3rgz_A 241 RAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLL 320 (768)
T ss_dssp HHTTTCSSCCEEECCSSCCEESCCCCCCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTC
T ss_pred HHHhcCCCCCEEECCCCcccCccCccccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCc
Confidence 6777777777777777666654 44444443 556666666666665566666666666
Q ss_pred cEEEeecccCCCCCCcc-ccccccccEEEeeccccccccCCccCCCC-CccEEEcccCCCCCCCCCCcCC--ccccceee
Q 002063 244 WKIELYANNLTGELPAE-LGNLTLLQEFDISSNQMYGKLPEEIGNLK-NLTVFQCFKNNFSGEFPSGFGD--MRKLFAFS 319 (973)
Q Consensus 244 ~~L~L~~n~l~~~~~~~-l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~l~~N~l~~~~p~~~~~--l~~L~~L~ 319 (973)
++|+|++|.+++.+|.. +.++++|++|++++|++++.+|..+.+++ +|+.|++++|++++.+|..+.. +++|+.|+
T Consensus 321 ~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~ 400 (768)
T 3rgz_A 321 ESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELY 400 (768)
T ss_dssp CEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEE
T ss_pred cEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEE
Confidence 66666666666555544 56666666666666666666666666655 6666666666666666666555 67788888
Q ss_pred ccccccCCCCCccccccccccccccccccccccCChhhhhhhhHHHHHhhhccCCCCCCCcccCccccceEecccccccc
Q 002063 320 IYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSG 399 (973)
Q Consensus 320 l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~Ls~N~l~~ 399 (973)
+++|.+++.+|..+..+++|+.|+|++|++++.+|..+..+.++..+.+..|.+.+.+|..+..+++|++|+|++|++++
T Consensus 401 L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 480 (768)
T 3rgz_A 401 LQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTG 480 (768)
T ss_dssp CCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCS
T ss_pred CCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccC
Confidence 88888888899999999999999999999999999999888877666666888888999999999999999999999999
Q ss_pred cCCccccCCCCcceEeccCCcCCCCCCCccCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEecCCCcCCCCccccc--
Q 002063 400 KIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSAL-- 477 (973)
Q Consensus 400 ~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~-- 477 (973)
.+|..+..+++|++|+|++|++++..+..++.+++|++|+|++|++++.+|..++.+++|+.|+|++|+++|.+|..+
T Consensus 481 ~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~ 560 (768)
T 3rgz_A 481 EIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFK 560 (768)
T ss_dssp CCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGT
T ss_pred cCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999988777543
Q ss_pred --------------------------------------------------------------------cccccCCEEEcc
Q 002063 478 --------------------------------------------------------------------GALRQLSSLHLE 489 (973)
Q Consensus 478 --------------------------------------------------------------------~~l~~L~~L~Ls 489 (973)
+.+++|+.|||+
T Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs 640 (768)
T 3rgz_A 561 QSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMS 640 (768)
T ss_dssp TTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECC
T ss_pred ccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECc
Confidence 335789999999
Q ss_pred CcccccCCCccccCccccchhhccccccccCCCccccccCCCCeeecCCCccCCCCCchhhccc-CceEEccCCcccccc
Q 002063 490 ENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLK-LSSIDLSENQLSGSV 568 (973)
Q Consensus 490 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-L~~l~ls~N~l~~~~ 568 (973)
+|+++|.+|.+++++++|+.|+|++|+++|.+|..|+.+++|+.|||++|+++|.+|..+..++ |+.|||++|+++|.|
T Consensus 641 ~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~i 720 (768)
T 3rgz_A 641 YNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPI 720 (768)
T ss_dssp SSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEEC
T ss_pred CCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccC
Confidence 9999999999999999999999999999999999999999999999999999999999999997 999999999999999
Q ss_pred Ccc--cccCCCCccccCCCCCccCcc
Q 002063 569 PLD--FLRMGGDGAFAGNEGLCLDQS 592 (973)
Q Consensus 569 p~~--~~~~~~~~~~~~n~~lc~~~~ 592 (973)
|.. |..+.. .+|.|||++||.|+
T Consensus 721 P~~~~~~~~~~-~~~~gN~~Lcg~~l 745 (768)
T 3rgz_A 721 PEMGQFETFPP-AKFLNNPGLCGYPL 745 (768)
T ss_dssp CSSSSGGGSCG-GGGCSCTEEESTTS
T ss_pred CCchhhccCCH-HHhcCCchhcCCCC
Confidence 975 666655 78999999999886
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.8e-60 Score=588.33 Aligned_cols=491 Identities=30% Similarity=0.517 Sum_probs=388.4
Q ss_pred CceEEEeecCCCCCccccccccCCCCCcEEeCCCCcccCccCccccCCCCCcEEEecCCcccCCCC-CcCCCCCCCEEec
Q 002063 73 GRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVP-DLSALKNLEIFDL 151 (973)
Q Consensus 73 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~-~l~~l~~L~~L~L 151 (973)
.+++.|+++++.+++.++. +.+++|++|+|++|.+++.+|. ++++++|++|+|++|.+.+..+ .++.+++|++|+|
T Consensus 178 ~~L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~L 254 (768)
T 3rgz_A 178 GELKHLAISGNKISGDVDV--SRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNI 254 (768)
T ss_dssp TTCCEEECCSSEEESCCBC--TTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEEC
T ss_pred CCCCEEECCCCcccccCCc--ccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEEC
Confidence 4677778887777776554 6777788888888887777766 7778888888888887776655 4777778888888
Q ss_pred cCcccCCccccccccccccceEEccCCcCCCCCCcccccCC-CCCCEEEcccccCCCCCChhhhccCCCCeeeccccccc
Q 002063 152 SINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNL-KNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKIS 230 (973)
Q Consensus 152 s~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l-~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~ 230 (973)
++|.+++.+|.. .+++|++|++++|.++. .+|..+..+ ++|++|+|++|++++.+|..++.+++|++|+|++|+++
T Consensus 255 s~n~l~~~~~~~--~l~~L~~L~L~~n~l~~-~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~ 331 (768)
T 3rgz_A 255 SSNQFVGPIPPL--PLKSLQYLSLAENKFTG-EIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFS 331 (768)
T ss_dssp CSSCCEESCCCC--CCTTCCEEECCSSEEEE-SCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEE
T ss_pred CCCcccCccCcc--ccCCCCEEECcCCccCC-ccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCccc
Confidence 888777666654 77778888888777753 456666554 77888888888877777777777888888888888777
Q ss_pred cccchh-hhccccccEEEeecccCCCCCCccccccc-cccEEEeeccccccccCCccCC--CCCccEEEcccCCCCCCCC
Q 002063 231 GEFPRS-IRKLQKLWKIELYANNLTGELPAELGNLT-LLQEFDISSNQMYGKLPEEIGN--LKNLTVFQCFKNNFSGEFP 306 (973)
Q Consensus 231 ~~~p~~-l~~l~~L~~L~L~~n~l~~~~~~~l~~l~-~L~~L~Ls~N~l~~~~p~~~~~--l~~L~~L~l~~N~l~~~~p 306 (973)
+.+|.. +..+++|++|++++|.+++.+|..+.+++ +|++|++++|++++.+|..+.. +++|+.|++++|++++.+|
T Consensus 332 ~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p 411 (768)
T 3rgz_A 332 GELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIP 411 (768)
T ss_dssp EECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECC
T ss_pred CcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccC
Confidence 777765 77777888888888877777777777776 7788888888777777777766 6777788888887777777
Q ss_pred CCcCCccccceeeccccccCCCCCccccccccccccccccccccccCChhhhhhhhHHHHHhhhccCCCCCCCcccCccc
Q 002063 307 SGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKT 386 (973)
Q Consensus 307 ~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~nn~~~~~p~~~~~l~~ 386 (973)
..++.+++|+.|++++|++++.+|..++.+++|+.|+|++|++++.+|..+.....+..+.+..|++.+.+|..+.++++
T Consensus 412 ~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 491 (768)
T 3rgz_A 412 PTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTN 491 (768)
T ss_dssp GGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTT
T ss_pred HHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCC
Confidence 77777777888888888777777777777777888888888877777777777666555555566677777777888888
Q ss_pred cceEecccccccccCCccccCCCCcceEeccCCcCCCCCCCccCCCCCCCEEEcccCCCCCCCChhh-------------
Q 002063 387 IQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSEL------------- 453 (973)
Q Consensus 387 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~------------- 453 (973)
|++|+|++|++++.+|.+|..+++|++|+|++|++++.++..++.+++|+.|+|++|+++|.+|..+
T Consensus 492 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~ 571 (768)
T 3rgz_A 492 LNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIA 571 (768)
T ss_dssp CCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTC
T ss_pred CCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccc
Confidence 8888888888887788888888888888888888887777777778888888888887777766544
Q ss_pred ---------------------------------------------------------hcCCCCCEEecCCCcCCCCcccc
Q 002063 454 ---------------------------------------------------------GRLTNLERLILTNNNFSGKIPSA 476 (973)
Q Consensus 454 ---------------------------------------------------------~~l~~L~~L~L~~N~l~~~~p~~ 476 (973)
..+++|+.|+|++|+++|.+|..
T Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~ 651 (768)
T 3rgz_A 572 GKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKE 651 (768)
T ss_dssp SCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGG
T ss_pred cccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHH
Confidence 34578999999999999999999
Q ss_pred ccccccCCEEEccCcccccCCCccccCccccchhhccccccccCCCccccccCCCCeeecCCCccCCCCCchhhcccCce
Q 002063 477 LGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLKLSS 556 (973)
Q Consensus 477 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~L~~ 556 (973)
++++++|+.|+|++|+++|.+|..++++++|+.|||++|+++|.+|..+..+++|++|+|++|+|+|.||..-.-..+..
T Consensus 652 l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~ 731 (768)
T 3rgz_A 652 IGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPP 731 (768)
T ss_dssp GGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCG
T ss_pred HhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998532223556
Q ss_pred EEccCCccccccC
Q 002063 557 IDLSENQLSGSVP 569 (973)
Q Consensus 557 l~ls~N~l~~~~p 569 (973)
..+.+|+.-|-.|
T Consensus 732 ~~~~gN~~Lcg~~ 744 (768)
T 3rgz_A 732 AKFLNNPGLCGYP 744 (768)
T ss_dssp GGGCSCTEEESTT
T ss_pred HHhcCCchhcCCC
Confidence 6678887555433
No 3
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=2.7e-57 Score=547.59 Aligned_cols=505 Identities=18% Similarity=0.187 Sum_probs=403.0
Q ss_pred cceeeeCCC---------CCceEEEeecCCCCCccccccccCCCCCcEEeCCCCcccCccCccccCCCCCcEEEecCCcc
Q 002063 63 FSGITCDSV---------TGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAM 133 (973)
Q Consensus 63 w~gv~C~~~---------~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l 133 (973)
+..|.|... ...++.|+|+++.+++..|..++.+++|++|+|++|.+++..|.+|+++++|++|+|++|++
T Consensus 14 ~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 93 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPL 93 (606)
T ss_dssp TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred CceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcc
Confidence 456888642 35799999999999998899999999999999999999998899999999999999999999
Q ss_pred cCCCC-CcCCCCCCCEEeccCcccCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccccCCCCCChh
Q 002063 134 VGSVP-DLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPES 212 (973)
Q Consensus 134 ~~~~~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~ 212 (973)
.+.++ .|+++++|++|+|++|.+++..+..+.++++|++|++++|.++...+|..++ +++|++|++++|.+++..|..
T Consensus 94 ~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L~~n~l~~~~~~~ 172 (606)
T 3t6q_A 94 IFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFP-TEKLKVLDFQNNAIHYLSKED 172 (606)
T ss_dssp SEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCC-CTTCCEEECCSSCCCEECHHH
T ss_pred cccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccC-CcccCEEEcccCcccccChhh
Confidence 88766 6999999999999999999888899999999999999999998766666555 999999999999999888999
Q ss_pred hhccCCCC--eeeccccccccccchhhhccccccEEEeecccCC--------------------------CCCCcccccc
Q 002063 213 ISELRELG--TLDICRNKISGEFPRSIRKLQKLWKIELYANNLT--------------------------GELPAELGNL 264 (973)
Q Consensus 213 l~~l~~L~--~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~--------------------------~~~~~~l~~l 264 (973)
++.+++|+ +|++++|++++..|..+.. .+|+.|++++|... ...+..+..+
T Consensus 173 ~~~l~~L~~l~L~l~~n~l~~~~~~~~~~-~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l 251 (606)
T 3t6q_A 173 MSSLQQATNLSLNLNGNDIAGIEPGAFDS-AVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGL 251 (606)
T ss_dssp HHTTTTCCSEEEECTTCCCCEECTTTTTT-CEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGG
T ss_pred hhhhcccceeEEecCCCccCccChhHhhh-ccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchh
Confidence 99999999 8999999999777766543 45555555544200 0001111222
Q ss_pred c--cccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCccccceeeccccccCCCCCcccccccccccc
Q 002063 265 T--LLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDV 342 (973)
Q Consensus 265 ~--~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L 342 (973)
. +|+.|++++|.+++..+..+.++++|+.|++++|+++ .+|..+..+++|++|++++|++++..|..+..+++|++|
T Consensus 252 ~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 330 (606)
T 3t6q_A 252 CEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHL 330 (606)
T ss_dssp GGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEE
T ss_pred hcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEE
Confidence 1 4555555555555544555555555555555555555 455555555555555555555555555555555555555
Q ss_pred ccccccccccCChh-hhhhhhHHHHHhhhccCCCCC--CCcccCccccceEecccccccccCCccccCCCCcceEeccCC
Q 002063 343 DISENQFSGSFPKY-LCEKRKLLNLLALSNNFSGEV--PNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDN 419 (973)
Q Consensus 343 ~Ls~N~l~~~~p~~-~~~~~~ll~ll~l~nn~~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 419 (973)
++++|.+.+.+|.. +..+..+.++....|.+.+.. +..+..+++|++|++++|.+.+..|..|..+++|+.|++++|
T Consensus 331 ~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 410 (606)
T 3t6q_A 331 SIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFT 410 (606)
T ss_dssp ECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTC
T ss_pred ECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCC
Confidence 55555555444433 333333222222233333333 667899999999999999999999999999999999999999
Q ss_pred cCCCCCCCc-cCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEecCCCcCCCC---ccccccccccCCEEEccCccccc
Q 002063 420 DFTGGISPL-IGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGK---IPSALGALRQLSSLHLEENALTG 495 (973)
Q Consensus 420 ~l~~~~~~~-~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~---~p~~~~~l~~L~~L~Ls~N~l~~ 495 (973)
++++..++. +..+++|+.|++++|.+++..|..+..+++|++|+|++|++++. .+..+..+++|++|+|++|++++
T Consensus 411 ~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~ 490 (606)
T 3t6q_A 411 RLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSS 490 (606)
T ss_dssp CEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCE
T ss_pred cCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCc
Confidence 999876654 88999999999999999999999999999999999999999863 33679999999999999999999
Q ss_pred CCCccccCccccchhhccccccccCCCccccccCCCCeeecCCCccCCCCCchhhccc-CceEEccCCccccccCcc
Q 002063 496 SIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLK-LSSIDLSENQLSGSVPLD 571 (973)
Q Consensus 496 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-L~~l~ls~N~l~~~~p~~ 571 (973)
..|..|+++++|+.|+|++|++++..|..|..+++| .|+|++|++++.+|..+..++ |+.+++++|+|.|.|+..
T Consensus 491 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~~ 566 (606)
T 3t6q_A 491 IDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCSNI 566 (606)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGGGH
T ss_pred cChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCCcH
Confidence 999999999999999999999999999999999999 999999999988888888875 999999999999999963
No 4
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.4e-58 Score=558.31 Aligned_cols=490 Identities=20% Similarity=0.273 Sum_probs=370.2
Q ss_pred hHHHHHHHHHHHhcCCCc-c-------cccCCCCCCCCCCCc---ceeeeCCCCCceEEEeecCCCCCccccccccCCCC
Q 002063 30 NVETQALIQFKSKLKDPH-G-------VLDSWKESADSPCGF---SGITCDSVTGRVTEISFDNKSLSGEISSSISALQS 98 (973)
Q Consensus 30 ~~~~~aLl~~k~~~~d~~-~-------~l~~W~~~~~~~c~w---~gv~C~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~ 98 (973)
.+|++||.+||.++.++. . ..++|+.+ .+||.| .||+|+.. +||++|+|++++++|.+|++++.|++
T Consensus 29 ~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~-~~~c~w~~~~GV~C~~~-~~V~~L~L~~~~l~g~lp~~l~~L~~ 106 (636)
T 4eco_A 29 IKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFN-KELDMWGAQPGVSLNSN-GRVTGLSLEGFGASGRVPDAIGQLTE 106 (636)
T ss_dssp HHHHHHHHHHHHHTTGGGCCCCC------CCCCCS-SCGGGTTCCTTEEECTT-CCEEEEECTTSCCEEEECGGGGGCTT
T ss_pred HHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCC-CCcccccCCCCeEEcCC-CCEEEEEecCcccCCcCChHHhcCcc
Confidence 469999999999986542 2 34589866 468999 99999864 89999999999999999999999999
Q ss_pred CcEEeCCCCcc------cC------ccCccccCCCCCcEEEecCCcccCCCCC-cCC-------------------CCCC
Q 002063 99 LTVLSLPFNVL------SG------KLPLELSNCSNLKVLNVTGNAMVGSVPD-LSA-------------------LKNL 146 (973)
Q Consensus 99 L~~L~Ls~n~l------~~------~~p~~l~~l~~L~~L~L~~n~l~~~~~~-l~~-------------------l~~L 146 (973)
|++|+|++|.+ .+ .+|... +.+|+ +++++|.+.+.++. ++. ...+
T Consensus 107 L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l 183 (636)
T 4eco_A 107 LEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITL 183 (636)
T ss_dssp CCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCC
T ss_pred ceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccch
Confidence 99999999976 33 444444 55667 77777777665542 331 1122
Q ss_pred CEEecc--CcccCCccccccccccccceEEccCCcCCCC----------------CCccccc--CCCCCCEEEcccccCC
Q 002063 147 EIFDLS--INYFTGRFPRWVVNLTQLVSLSIGDNVYDEA----------------EIPESIG--NLKNLTYLFLAHCNLR 206 (973)
Q Consensus 147 ~~L~Ls--~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~----------------~ip~~~~--~l~~L~~L~L~~n~l~ 206 (973)
+.+.+. .|++++ +|..|+++++|++|+|++|.++.. .+|+.++ ++++|++|+|++|++.
T Consensus 184 ~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~ 262 (636)
T 4eco_A 184 KDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNL 262 (636)
T ss_dssp CTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTC
T ss_pred hhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCC
Confidence 333332 578887 888888899999999998888641 1788888 8899999999999888
Q ss_pred CCCChhhhccCCCCeeeccccc-ccc-ccchhhhcc------ccccEEEeecccCCCCCCc--cccccccccEEEeeccc
Q 002063 207 GRIPESISELRELGTLDICRNK-ISG-EFPRSIRKL------QKLWKIELYANNLTGELPA--ELGNLTLLQEFDISSNQ 276 (973)
Q Consensus 207 ~~~p~~l~~l~~L~~L~L~~n~-l~~-~~p~~l~~l------~~L~~L~L~~n~l~~~~~~--~l~~l~~L~~L~Ls~N~ 276 (973)
+.+|..++++++|++|+|++|+ +++ .+|..++++ ++|++|+|++|+++ .+|. .++++++|++|++++|+
T Consensus 263 ~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~ 341 (636)
T 4eco_A 263 TKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQ 341 (636)
T ss_dssp SSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCC
T ss_pred ccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCc
Confidence 8888888889999999999998 887 788888877 88888888888888 7787 78888888888888888
Q ss_pred cccccCCccCCCCCccEEEcccCCCCCCCCCCcCCccc-cceeeccccccCCCCCccccccc--cccccccccccccccC
Q 002063 277 MYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRK-LFAFSIYGNRFSGPFPENLGRYT--ALTDVDISENQFSGSF 353 (973)
Q Consensus 277 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~-L~~L~l~~N~l~~~~~~~l~~l~--~L~~L~Ls~N~l~~~~ 353 (973)
++|.+| .++++++|+.|++++|+++ .+|..++.+++ |+.|++++|+++ .+|..+..+. +|+.|++++|++++.+
T Consensus 342 l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~ 418 (636)
T 4eco_A 342 LEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVD 418 (636)
T ss_dssp CEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTT
T ss_pred Cccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcc
Confidence 888888 8888888888888888888 77777888888 888888888888 6777776654 7888888888887655
Q ss_pred ChhhhhhhhHHHHHhhhccCCCCCCCcccCccccceEecccccccccCCccccCCCCcceEeccCCcCCCCCCCccCCCC
Q 002063 354 PKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLST 433 (973)
Q Consensus 354 p~~~~~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~ 433 (973)
|..+.. .......+++|++|+|++|++++..+..+..+++|+.|+|++|+++.++...+....
T Consensus 419 p~~l~~-----------------~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~ 481 (636)
T 4eco_A 419 GKNFDP-----------------LDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDEN 481 (636)
T ss_dssp TCSSCT-----------------TCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETT
T ss_pred hhhhcc-----------------cccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhcccc
Confidence 543310 001111556788888888888744444455577888888888887755554444332
Q ss_pred -------CCCEEEcccCCCCCCCChhhh--cCCCCCEEecCCCcCCCCccccccccccCCEEEccCcccccCCCccccCc
Q 002063 434 -------SLSQLVLQNNRFSGELPSELG--RLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDC 504 (973)
Q Consensus 434 -------~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 504 (973)
+|++|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|+|++|+
T Consensus 482 ~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~------------ 547 (636)
T 4eco_A 482 ENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQR------------ 547 (636)
T ss_dssp EECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCB------------
T ss_pred ccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCc------------
Confidence 7777777777777 5666665 77777777777777775 67777777777777776665
Q ss_pred cccchhhccccccccCCCccccccCCCCeeecCCCccCCCCCchhhcccCceEEccCCcccccc
Q 002063 505 ARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLKLSSIDLSENQLSGSV 568 (973)
Q Consensus 505 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~L~~l~ls~N~l~~~~ 568 (973)
++++|++.+.+|..+..+++|+.|+|++|+| +.+|..+. -.|+.|||++|++.+.-
T Consensus 548 ------~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~-~~L~~L~Ls~N~l~~~~ 603 (636)
T 4eco_A 548 ------DAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT-PNISVLDIKDNPNISID 603 (636)
T ss_dssp ------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC-TTCCEEECCSCTTCEEE
T ss_pred ------ccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh-CcCCEEECcCCCCcccc
Confidence 4467777778888888888888888888888 47777655 34888888888776543
No 5
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.8e-57 Score=555.92 Aligned_cols=499 Identities=20% Similarity=0.271 Sum_probs=384.5
Q ss_pred CchHHHHHHHHHHHhcCCCcccccCCCCCC----CCC--CCc------------ceeeeCCCCCceEEEeecCCCCCccc
Q 002063 28 SLNVETQALIQFKSKLKDPHGVLDSWKESA----DSP--CGF------------SGITCDSVTGRVTEISFDNKSLSGEI 89 (973)
Q Consensus 28 ~~~~~~~aLl~~k~~~~d~~~~l~~W~~~~----~~~--c~w------------~gv~C~~~~~~v~~l~l~~~~l~~~~ 89 (973)
...+|++||++||+++.|| +|+.++ .+| |.| .||+|+. ++||+.|+|++++++|.+
T Consensus 266 ~~~~d~~ALl~~k~~l~~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~~~L~G~i 339 (876)
T 4ecn_A 266 EYIKDYKALKAIWEALDGK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAGFGAKGRV 339 (876)
T ss_dssp HHHHHHHHHHHHHHHTTGG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT-TSCEEEEECTTTCCEEEE
T ss_pred cchHHHHHHHHHHHHcCCC-----CCCcCCCcccccCCccccccccccccccCcCceEecC-CCCEEEEECccCCCCCcC
Confidence 3467999999999999887 887654 234 999 9999987 689999999999999999
Q ss_pred cccccCCCCCcEEeC-CCCcccCccCccccCCC-CCcE---EEec------------CCccc-----------CCCC-Cc
Q 002063 90 SSSISALQSLTVLSL-PFNVLSGKLPLELSNCS-NLKV---LNVT------------GNAMV-----------GSVP-DL 140 (973)
Q Consensus 90 ~~~l~~l~~L~~L~L-s~n~l~~~~p~~l~~l~-~L~~---L~L~------------~n~l~-----------~~~~-~l 140 (973)
|++|++|++|++|+| ++|.++|..|..-.... .+.. ..++ ...+. ...+ ..
T Consensus 340 p~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~ 419 (876)
T 4ecn_A 340 PDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKK 419 (876)
T ss_dssp CGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCC
T ss_pred chHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcccccccc
Confidence 999999999999999 89999887553321110 0000 0000 00000 0000 11
Q ss_pred CCCCCCCEEeccC--cccCCccccccccccccceEEccCCcCCCC----------------CCccccc--CCCCCCEEEc
Q 002063 141 SALKNLEIFDLSI--NYFTGRFPRWVVNLTQLVSLSIGDNVYDEA----------------EIPESIG--NLKNLTYLFL 200 (973)
Q Consensus 141 ~~l~~L~~L~Ls~--n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~----------------~ip~~~~--~l~~L~~L~L 200 (973)
.....++.+.++. |.+++ +|..|+++++|++|+|++|.++.. .+|+.++ ++++|++|+|
T Consensus 420 ~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~L 498 (876)
T 4ecn_A 420 DSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVEL 498 (876)
T ss_dssp CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEE
T ss_pred ccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEEC
Confidence 2233455555554 88887 888999999999999999998751 2889888 9999999999
Q ss_pred ccccCCCCCChhhhccCCCCeeeccccc-ccc-ccchhhhccc-------cccEEEeecccCCCCCCc--cccccccccE
Q 002063 201 AHCNLRGRIPESISELRELGTLDICRNK-ISG-EFPRSIRKLQ-------KLWKIELYANNLTGELPA--ELGNLTLLQE 269 (973)
Q Consensus 201 ~~n~l~~~~p~~l~~l~~L~~L~L~~n~-l~~-~~p~~l~~l~-------~L~~L~L~~n~l~~~~~~--~l~~l~~L~~ 269 (973)
++|++.+.+|..++++++|++|+|++|+ +++ .+|..+++++ +|++|+|++|+++ .+|. .+.++++|+.
T Consensus 499 s~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~ 577 (876)
T 4ecn_A 499 YNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGL 577 (876)
T ss_dssp ESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCE
T ss_pred cCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCE
Confidence 9999999999999999999999999998 998 8999888887 9999999999999 8888 8999999999
Q ss_pred EEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCccc-cceeeccccccCCCCCcccccccc--cccccccc
Q 002063 270 FDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRK-LFAFSIYGNRFSGPFPENLGRYTA--LTDVDISE 346 (973)
Q Consensus 270 L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~-L~~L~l~~N~l~~~~~~~l~~l~~--L~~L~Ls~ 346 (973)
|+|++|+++ .+| .++++++|+.|++++|++. .+|..+..+++ |+.|++++|+++ .+|..+..+.. |+.|+|++
T Consensus 578 L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~ 653 (876)
T 4ecn_A 578 LDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSY 653 (876)
T ss_dssp EECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCS
T ss_pred EECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcC
Confidence 999999998 888 8999999999999999999 88989999999 999999999999 78888887765 99999999
Q ss_pred ccccccCChhhhhhhhHHHHHhhhccCCCCCCCccc--CccccceEecccccccccCCccc-cCCCCcceEeccCCcCCC
Q 002063 347 NQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYA--DCKTIQRLRISDNHLSGKIPDGL-WALPNVGMLDFGDNDFTG 423 (973)
Q Consensus 347 N~l~~~~p~~~~~~~~ll~ll~l~nn~~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~ 423 (973)
|++.+.+|. ++..+. .+++|++|+|++|+++ .+|..+ ..+++|+.|+|++|+++.
T Consensus 654 N~l~g~ip~---------------------l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~~ 711 (876)
T 4ecn_A 654 NKIGSEGRN---------------------ISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMTS 711 (876)
T ss_dssp SCTTTTSSS---------------------CSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCSC
T ss_pred CcCCCcccc---------------------chhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCCc
Confidence 999976653 222222 3458999999999999 556554 478999999999999996
Q ss_pred CCCCccCCC-------CCCCEEEcccCCCCCCCChhhh--cCCCCCEEecCCCcCCCCccccccccccCCEEEccC----
Q 002063 424 GISPLIGLS-------TSLSQLVLQNNRFSGELPSELG--RLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEE---- 490 (973)
Q Consensus 424 ~~~~~~~~~-------~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~---- 490 (973)
++...+... ++|+.|+|++|+|+ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|+|++
T Consensus 712 ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~l 789 (876)
T 4ecn_A 712 IPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDA 789 (876)
T ss_dssp CCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCT
T ss_pred cChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCc
Confidence 666555543 38999999999999 7888887 89999999999999996 788899999999999987
Q ss_pred --cccccCCCccccCccccchhhccccccccCCCccccccCCCCeeecCCCccCCCCCchhhcc-cCceEEccCCccc
Q 002063 491 --NALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKL-KLSSIDLSENQLS 565 (973)
Q Consensus 491 --N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l-~L~~l~ls~N~l~ 565 (973)
|++.+.+|..++++++|+.|+|++|+| +.+|..+. ++|+.|+|++|++...-+..+... .+..+.|.+|++.
T Consensus 790 s~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~~~~~~~~~~~~~L~~n~~~ 864 (876)
T 4ecn_A 790 EGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKTQ 864 (876)
T ss_dssp TCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEECGGGHHHHHTTCCEEECCTTS
T ss_pred ccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccChHHccccccchheeecCCCcc
Confidence 445555555555555555555555555 34554433 355555555555543333333222 2444444444444
No 6
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=2.5e-56 Score=546.59 Aligned_cols=531 Identities=19% Similarity=0.188 Sum_probs=408.3
Q ss_pred CCCcceeeeCC---------CCCceEEEeecCCCCCccccccccCCCCCcEEeCCCCcccCccCccccCCCCCcEEEecC
Q 002063 60 PCGFSGITCDS---------VTGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTG 130 (973)
Q Consensus 60 ~c~w~gv~C~~---------~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~ 130 (973)
.|.+..|.|.. ...+++.|+|+++++++..+..++.+++|++|+|++|.+++..|..|+++++|++|+|++
T Consensus 3 ~~~~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 82 (680)
T 1ziw_A 3 TVSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQH 82 (680)
T ss_dssp -CBSSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCS
T ss_pred eeECCeeECCCCCccccccccCCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCC
Confidence 46666677753 235899999999999998888999999999999999999999999999999999999999
Q ss_pred CcccCCCCC-cCCCCCCCEEeccCcccCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccccCCCCC
Q 002063 131 NAMVGSVPD-LSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRI 209 (973)
Q Consensus 131 n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~ 209 (973)
|.+++.++. |+++++|++|+|++|.+++..|..|.++++|++|++++|.++.. .|..++++++|++|++++|.+++..
T Consensus 83 n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~ 161 (680)
T 1ziw_A 83 NELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSST-KLGTQVQLENLQELLLSNNKIQALK 161 (680)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCC-CCCSSSCCTTCCEEECCSSCCCCBC
T ss_pred CccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCccccc-CchhhcccccCCEEEccCCcccccC
Confidence 999998874 99999999999999999988889999999999999999998753 4677889999999999999999877
Q ss_pred Chhhh--ccCCCCeeeccccccccccchhhhcc---------------------------ccccEEEeecccCCCCCCcc
Q 002063 210 PESIS--ELRELGTLDICRNKISGEFPRSIRKL---------------------------QKLWKIELYANNLTGELPAE 260 (973)
Q Consensus 210 p~~l~--~l~~L~~L~L~~n~l~~~~p~~l~~l---------------------------~~L~~L~L~~n~l~~~~~~~ 260 (973)
+..+. .+++|++|++++|++++..|..+..+ ++|+.|++++|.+++..|..
T Consensus 162 ~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~ 241 (680)
T 1ziw_A 162 SEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTT 241 (680)
T ss_dssp HHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTT
T ss_pred HHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhH
Confidence 77665 45789999999998887777665543 34556666666666666666
Q ss_pred cccccc--ccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCC---------------------------
Q 002063 261 LGNLTL--LQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGD--------------------------- 311 (973)
Q Consensus 261 l~~l~~--L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~--------------------------- 311 (973)
+.+++. |++|+|++|++.+..|..++.+++|+.|++++|++.+..|..|..
T Consensus 242 ~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~ 321 (680)
T 1ziw_A 242 FLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKID 321 (680)
T ss_dssp TGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEEC
T ss_pred hhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccC
Confidence 666544 777777777776666666777777777777777766655554444
Q ss_pred ------ccccceeeccccccCCCCCcccccccccccccccccccccc-CCh-hhhhh--hhHHHHHhhhccCCCCCCCcc
Q 002063 312 ------MRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGS-FPK-YLCEK--RKLLNLLALSNNFSGEVPNSY 381 (973)
Q Consensus 312 ------l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~-~p~-~~~~~--~~ll~ll~l~nn~~~~~p~~~ 381 (973)
+++|+.|++++|.+++..+..+..+++|++|++++|.+... ++. .+... ..+..+....|++.+..|..|
T Consensus 322 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~ 401 (680)
T 1ziw_A 322 DFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAF 401 (680)
T ss_dssp TTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTT
T ss_pred hhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhh
Confidence 45555555555555555555555666666666665553321 111 11111 111112222456666677888
Q ss_pred cCccccceEecccccccccCC-ccccCCCCcceEeccCCcCCCCCCCccCCCCCCCEEEcccCCCC--CCCChhhhcCCC
Q 002063 382 ADCKTIQRLRISDNHLSGKIP-DGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFS--GELPSELGRLTN 458 (973)
Q Consensus 382 ~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~--~~~p~~~~~l~~ 458 (973)
..+++|++|+|++|.+.+.+| ..|.++++|++|++++|++++..+..|..+++|+.|++++|.+. +..|..+..+++
T Consensus 402 ~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~ 481 (680)
T 1ziw_A 402 SWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRN 481 (680)
T ss_dssp TTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTT
T ss_pred hCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCC
Confidence 899999999999999987665 67888999999999999988888888888889999999988886 567888899999
Q ss_pred CCEEecCCCcCCCCccccccccccCCEEEccCcccccCCC--------ccccCccccchhhccccccccCCCccccccCC
Q 002063 459 LERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIP--------NEMGDCARIVDLNLARNSLSGNIPRSLSLLSS 530 (973)
Q Consensus 459 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p--------~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 530 (973)
|+.|+|++|++++..+..|.++++|++|+|++|++++..+ ..|.++++|+.|+|++|+|+...+..|.++++
T Consensus 482 L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~ 561 (680)
T 1ziw_A 482 LTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFE 561 (680)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred CCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccC
Confidence 9999999999998888888999999999999999886522 34788889999999999998555567889999
Q ss_pred CCeeecCCCccCCCCCchhhccc-CceEEccCCccccccCcccc-cCCC--CccccCCCCCccCc
Q 002063 531 LNALNLSGNKLTGSIPDNLMKLK-LSSIDLSENQLSGSVPLDFL-RMGG--DGAFAGNEGLCLDQ 591 (973)
Q Consensus 531 L~~L~L~~N~l~~~~p~~~~~l~-L~~l~ls~N~l~~~~p~~~~-~~~~--~~~~~~n~~lc~~~ 591 (973)
|+.|+|++|+|++..+..+..++ |+.|+|++|++++..|..+. .+.. .-.+.+||+.|..+
T Consensus 562 L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 562 LKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCC
T ss_pred cceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCc
Confidence 99999999999966666666765 99999999999987765443 2222 24678899888765
No 7
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=2.6e-56 Score=538.97 Aligned_cols=502 Identities=20% Similarity=0.174 Sum_probs=395.2
Q ss_pred CCCCc----ceeeeCC---------CCCceEEEeecCCCCCccccccccCCCCCcEEeCCCCcccCccCccccCCCCCcE
Q 002063 59 SPCGF----SGITCDS---------VTGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKV 125 (973)
Q Consensus 59 ~~c~w----~gv~C~~---------~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~ 125 (973)
++|.| ..|.|.. ...+++.|+|+++.+++..+..++.+++|++|+|++|.+++..|..|+++++|++
T Consensus 5 ~~c~~~~~~~~~~c~~~~l~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~ 84 (606)
T 3vq2_A 5 NPCIEVVPNITYQCMDQKLSKVPDDIPSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSN 84 (606)
T ss_dssp -CCEEEETTTEEECTTSCCSSCCTTSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCE
T ss_pred CCceecCCCCceEccCCCcccCCCCCCCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCE
Confidence 34555 3577753 2367999999999999988889999999999999999999888999999999999
Q ss_pred EEecCCcccCCCC-CcCCCCCCCEEeccCcccCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEccccc
Q 002063 126 LNVTGNAMVGSVP-DLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCN 204 (973)
Q Consensus 126 L~L~~n~l~~~~~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~ 204 (973)
|+|++|.+.+.+| .|+++++|++|+|++|.+++..+..|+++++|++|++++|.+....+|..++++++|++|++++|+
T Consensus 85 L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~ 164 (606)
T 3vq2_A 85 LILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNY 164 (606)
T ss_dssp EECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSC
T ss_pred eECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCc
Confidence 9999999999865 599999999999999999988888999999999999999999877889999999999999999999
Q ss_pred CCCCCChhhhccCCCC----eeeccccccccccchhhhccccccEEEeecccCCC-CCCccccccccccEEEe-------
Q 002063 205 LRGRIPESISELRELG----TLDICRNKISGEFPRSIRKLQKLWKIELYANNLTG-ELPAELGNLTLLQEFDI------- 272 (973)
Q Consensus 205 l~~~~p~~l~~l~~L~----~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~-~~~~~l~~l~~L~~L~L------- 272 (973)
+++..|..++.+++|+ +|++++|++++..+..+.. .+|++|++++|.+++ ..|..+.++++|+.+++
T Consensus 165 l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~-~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~ 243 (606)
T 3vq2_A 165 IQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQG-IKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKD 243 (606)
T ss_dssp CCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTT-CEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTT
T ss_pred ceecChhhhhhhhccccccceeeccCCCcceeCcccccC-ceeeeeeccCCccchhHHHHHhcccccccccccccccccc
Confidence 9998888888887776 7999999999655555544 489999999987752 23333333333333333
Q ss_pred --------------------------eccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCccccceeeccccccC
Q 002063 273 --------------------------SSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFS 326 (973)
Q Consensus 273 --------------------------s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 326 (973)
..|.+.+.+|. +..+++|+.|++++|.+. .+| .+..+++|+.|++++|.+
T Consensus 244 ~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~-~l~-~l~~~~~L~~L~l~~n~l- 319 (606)
T 3vq2_A 244 ERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIK-YLE-DVPKHFKWQSLSIIRCQL- 319 (606)
T ss_dssp SCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCC-CCC-CCCTTCCCSEEEEESCCC-
T ss_pred CCcccccChHHhhhhhhccHhheeccccccccccccc-cccCCCCCEEEecCccch-hhh-hccccccCCEEEcccccC-
Confidence 33334444443 444455555555555543 223 444455555555555555
Q ss_pred CCCCccccccccccccccccccccccCChhhhhhhhHHHHHhhhccCCCC--CCCcccCccccceEecccccccccCCcc
Q 002063 327 GPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGE--VPNSYADCKTIQRLRISDNHLSGKIPDG 404 (973)
Q Consensus 327 ~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~nn~~~~--~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 404 (973)
+.+| .+ .+++|+.|++++|+..+.++ +..++++..+....|++.+. +|..+..+++|++|+|++|.+++ +|..
T Consensus 320 ~~lp-~~-~l~~L~~L~l~~n~~~~~~~--~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~ 394 (606)
T 3vq2_A 320 KQFP-TL-DLPFLKSLTLTMNKGSISFK--KVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSAN 394 (606)
T ss_dssp SSCC-CC-CCSSCCEEEEESCSSCEECC--CCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCC
T ss_pred cccc-cC-CCCccceeeccCCcCccchh--hccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhh
Confidence 3444 22 44555555555553332221 11222221111112222222 35667888999999999999984 6688
Q ss_pred ccCCCCcceEeccCCcCCCCCC-CccCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEecCCCcCCC-Ccccccccccc
Q 002063 405 LWALPNVGMLDFGDNDFTGGIS-PLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSG-KIPSALGALRQ 482 (973)
Q Consensus 405 ~~~l~~L~~L~L~~N~l~~~~~-~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~ 482 (973)
|..+++|+.|++++|++.+..+ ..+..+++|++|++++|++.+..|..+..+++|++|++++|++++ .+|..+..+++
T Consensus 395 ~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~ 474 (606)
T 3vq2_A 395 FMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTN 474 (606)
T ss_dssp CTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTT
T ss_pred ccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCC
Confidence 9999999999999999998877 688999999999999999999999999999999999999999997 47889999999
Q ss_pred CCEEEccCcccccCCCccccCccccchhhccccccccCCCccccccCCCCeeecCCCccCCCCCchhhccc--CceEEcc
Q 002063 483 LSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLK--LSSIDLS 560 (973)
Q Consensus 483 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~--L~~l~ls 560 (973)
|++|+|++|++++..|..|+++++|+.|+|++|++++.+|..|..+++|+.|+|++|+|+ .+|..+..++ |+.|+++
T Consensus 475 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~ 553 (606)
T 3vq2_A 475 LTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLT 553 (606)
T ss_dssp CCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECC
T ss_pred CCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEcc
Confidence 999999999999999999999999999999999999988999999999999999999999 7787788873 9999999
Q ss_pred CCccccccCcc
Q 002063 561 ENQLSGSVPLD 571 (973)
Q Consensus 561 ~N~l~~~~p~~ 571 (973)
+|+|.|.|+..
T Consensus 554 ~N~~~c~c~~~ 564 (606)
T 3vq2_A 554 NNSVACICEHQ 564 (606)
T ss_dssp SCCCCCSSTTH
T ss_pred CCCcccCCccH
Confidence 99999999974
No 8
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-54 Score=542.26 Aligned_cols=495 Identities=19% Similarity=0.225 Sum_probs=370.0
Q ss_pred CCcceeeeCCCCCceEEEeecCCCCCccccccccCCCCCcEEeCCCCcccCcc-CccccCCCCCcEEEecCCcccCCCC-
Q 002063 61 CGFSGITCDSVTGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKL-PLELSNCSNLKVLNVTGNAMVGSVP- 138 (973)
Q Consensus 61 c~w~gv~C~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~-p~~l~~l~~L~~L~L~~n~l~~~~~- 138 (973)
|.|..|.+ ...+++.|||++|.+++..+..++.+++|++|+|++|.+.+.+ |.+|+++++|++|+|++|.+.+..|
T Consensus 14 ~~L~~vP~--lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~ 91 (844)
T 3j0a_A 14 CNLTQVPQ--VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPD 91 (844)
T ss_dssp CCSSCCCS--SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTT
T ss_pred CCCCCCCC--CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHh
Confidence 56888877 5679999999999999999999999999999999999777676 7889999999999999999998865
Q ss_pred CcCCCCCCCEEeccCcccCCccccc--cccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccccCCCCCChhhhcc
Q 002063 139 DLSALKNLEIFDLSINYFTGRFPRW--VVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISEL 216 (973)
Q Consensus 139 ~l~~l~~L~~L~Ls~n~l~~~~~~~--~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l 216 (973)
.|+++++|++|+|++|.+++..|.. |.++++|++|+|++|.++....+..++++++|++|+|++|.+++..+..+..+
T Consensus 92 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l 171 (844)
T 3j0a_A 92 AFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPL 171 (844)
T ss_dssp SSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHH
T ss_pred HccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccc
Confidence 6999999999999999999877665 99999999999999999877666789999999999999999999999999988
Q ss_pred --CCCCeeeccccccccccchhhhcccc------ccEEEeecccCCCCCCccccc-------------------------
Q 002063 217 --RELGTLDICRNKISGEFPRSIRKLQK------LWKIELYANNLTGELPAELGN------------------------- 263 (973)
Q Consensus 217 --~~L~~L~L~~n~l~~~~p~~l~~l~~------L~~L~L~~n~l~~~~~~~l~~------------------------- 263 (973)
++|+.|++++|.+.+..|..++.+.+ |++|++++|.+++..+..+..
T Consensus 172 ~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~ 251 (844)
T 3j0a_A 172 QGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHN 251 (844)
T ss_dssp HHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSS
T ss_pred cCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccc
Confidence 89999999999999988887777665 999999999888766655432
Q ss_pred -------------cccccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCccccceeeccccccCCCCC
Q 002063 264 -------------LTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFP 330 (973)
Q Consensus 264 -------------l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~ 330 (973)
.++|+.|+|++|.+.+..|..+..+++|+.|++++|++++..|..|..+++|+.|++++|++++..|
T Consensus 252 l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 331 (844)
T 3j0a_A 252 IKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYS 331 (844)
T ss_dssp STTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCS
T ss_pred cCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCH
Confidence 2578888888888887778888888888888888888888778888888888888888888887778
Q ss_pred ccccccccccccccccccccccCChhhhhhhhHHHHHhhhccCCCCCCCcccCccccceEecccccccccCCccccCCCC
Q 002063 331 ENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPN 410 (973)
Q Consensus 331 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 410 (973)
..+..+++|+.|+|++|.+++..+..+..++++.. +.+++|....++ .+++|+.|++++|+++ .+|.. ...
T Consensus 332 ~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~-L~Ls~N~l~~i~----~~~~L~~L~l~~N~l~-~l~~~---~~~ 402 (844)
T 3j0a_A 332 SNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQT-LDLRDNALTTIH----FIPSIPDIFLSGNKLV-TLPKI---NLT 402 (844)
T ss_dssp CSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCE-EEEETCCSCCCS----SCCSCSEEEEESCCCC-CCCCC---CTT
T ss_pred HHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCE-EECCCCCCCccc----CCCCcchhccCCCCcc-ccccc---ccc
Confidence 88888888888888888887544443433333222 222222222222 1445555555555555 33322 334
Q ss_pred cceEeccCCcCCCCCCC-ccCCCCCCCEEEcccCCCCCCCCh-hhhcCCCCCEEecCCCcCC-----CCccccccccccC
Q 002063 411 VGMLDFGDNDFTGGISP-LIGLSTSLSQLVLQNNRFSGELPS-ELGRLTNLERLILTNNNFS-----GKIPSALGALRQL 483 (973)
Q Consensus 411 L~~L~L~~N~l~~~~~~-~~~~~~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~-----~~~p~~~~~l~~L 483 (973)
++.|++++|++++.... .+..+++|+.|+|++|++++..+. .+..+++|+.|+|++|.++ +..+..|.++++|
T Consensus 403 l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L 482 (844)
T 3j0a_A 403 ANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHL 482 (844)
T ss_dssp CCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCE
T ss_pred cceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccc
Confidence 55566666665554322 234566677777777776644332 3444666777777777665 3334556667777
Q ss_pred CEEEccCcccccCCCccccCccccchhhccccccccCCCccccccCCCCeeecCCCccCCCCCchhhcccCceEEccCCc
Q 002063 484 SSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLKLSSIDLSENQ 563 (973)
Q Consensus 484 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~L~~l~ls~N~ 563 (973)
+.|+|++|+|++.+|..|.++++|+.|+|++|+|++..|..+. ++|+.|+|++|+|++.+|..+. .|+.+++++|+
T Consensus 483 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~--~L~~l~l~~Np 558 (844)
T 3j0a_A 483 QVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFV--SLSVLDITHNK 558 (844)
T ss_dssp ECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCS--SCCEEEEEEEC
T ss_pred cEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhC--CcCEEEecCCC
Confidence 7777777777766666677777777777777777765555554 6677777777777766666543 36667777777
Q ss_pred cccccCc
Q 002063 564 LSGSVPL 570 (973)
Q Consensus 564 l~~~~p~ 570 (973)
|.|.|+.
T Consensus 559 ~~C~c~~ 565 (844)
T 3j0a_A 559 FICECEL 565 (844)
T ss_dssp CCCSSSC
T ss_pred ccccccc
Confidence 7777764
No 9
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=3.6e-54 Score=527.46 Aligned_cols=497 Identities=20% Similarity=0.170 Sum_probs=396.2
Q ss_pred CceEEEeecCCCCCccccccccCCCCCcEEeCCCCcccCccCccccCCCCCcEEEecCCcccCCCC-CcCCCCCCCEEec
Q 002063 73 GRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVP-DLSALKNLEIFDL 151 (973)
Q Consensus 73 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~-~l~~l~~L~~L~L 151 (973)
.+++.|+|+++.+++..|..++.+++|++|+|++|.+++..+..|+++++|++|+|++|++.+.++ .|+++++|++|+|
T Consensus 49 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 128 (680)
T 1ziw_A 49 SQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDL 128 (680)
T ss_dssp TTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEEC
T ss_pred CcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEEC
Confidence 467888888888888888888888899999998888885555578888899999999888888775 4888888899999
Q ss_pred cCcccCCccccccccccccceEEccCCcCCCCCCcccc--cCCCCCCEEEcccccCCCCCChhhhcc-------------
Q 002063 152 SINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESI--GNLKNLTYLFLAHCNLRGRIPESISEL------------- 216 (973)
Q Consensus 152 s~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~--~~l~~L~~L~L~~n~l~~~~p~~l~~l------------- 216 (973)
++|.+++..|..+.++++|++|++++|.++.. .+..+ ..+++|++|++++|++++..|..+..+
T Consensus 129 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l 207 (680)
T 1ziw_A 129 SHNGLSSTKLGTQVQLENLQELLLSNNKIQAL-KSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQL 207 (680)
T ss_dssp CSSCCSCCCCCSSSCCTTCCEEECCSSCCCCB-CHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCC
T ss_pred CCCcccccCchhhcccccCCEEEccCCccccc-CHHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhcccccc
Confidence 88888888888888888888888888887643 23333 345777777877777776666554433
Q ss_pred --------------CCCCeeeccccccccccchhhhcccc--ccEEEeecccCCCCCCccccccccccEEEeeccccccc
Q 002063 217 --------------RELGTLDICRNKISGEFPRSIRKLQK--LWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGK 280 (973)
Q Consensus 217 --------------~~L~~L~L~~n~l~~~~p~~l~~l~~--L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~ 280 (973)
++|+.|++++|++++..|..+..++. |++|+|++|++++..|..|..+++|++|++++|++.+.
T Consensus 208 ~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 287 (680)
T 1ziw_A 208 GPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHL 287 (680)
T ss_dssp HHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEE
T ss_pred ChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCcc
Confidence 33455555555555555555555543 55555555555555555555555555555555555544
Q ss_pred cCC---------------------------------ccCCCCCccEEEcccCCCCCCCCCCcCCccccceeeccccccCC
Q 002063 281 LPE---------------------------------EIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSG 327 (973)
Q Consensus 281 ~p~---------------------------------~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 327 (973)
.|. .+..+++|+.|++++|++.+..+..|..+++|++|++++|.+..
T Consensus 288 ~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~ 367 (680)
T 1ziw_A 288 FSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSL 367 (680)
T ss_dssp CTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCC
T ss_pred ChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhh
Confidence 333 45667888888889999999888899999999999999998653
Q ss_pred C--CCcccccc--ccccccccccccccccCChhhhhhhhHHHHHhhhccCCCCCC-CcccCccccceEecccccccccCC
Q 002063 328 P--FPENLGRY--TALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVP-NSYADCKTIQRLRISDNHLSGKIP 402 (973)
Q Consensus 328 ~--~~~~l~~l--~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~nn~~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p 402 (973)
. ....+..+ ++|+.|++++|++++..|..+..+.++..+....|.+.+.+| ..+..+++|++|+|++|++.+..+
T Consensus 368 ~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 447 (680)
T 1ziw_A 368 RTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTR 447 (680)
T ss_dssp CEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCT
T ss_pred hhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeCh
Confidence 2 22334333 589999999999998888888877776555555666666666 689999999999999999999999
Q ss_pred ccccCCCCcceEeccCCcCC--CCCCCccCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEecCCCcCCCCcc------
Q 002063 403 DGLWALPNVGMLDFGDNDFT--GGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIP------ 474 (973)
Q Consensus 403 ~~~~~l~~L~~L~L~~N~l~--~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p------ 474 (973)
..|..+++|+.|++++|.+. +..+..+..+++|+.|+|++|++++..+..+.++++|++|+|++|++++..+
T Consensus 448 ~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 527 (680)
T 1ziw_A 448 NSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGG 527 (680)
T ss_dssp TTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTS
T ss_pred hhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCC
Confidence 99999999999999999987 5577789999999999999999998888889999999999999999986422
Q ss_pred --ccccccccCCEEEccCcccccCCCccccCccccchhhccccccccCCCccccccCCCCeeecCCCccCCCCCchhh-c
Q 002063 475 --SALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLM-K 551 (973)
Q Consensus 475 --~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~ 551 (973)
..|.++++|++|+|++|+++...+..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++.+|..+. .
T Consensus 528 ~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~ 607 (680)
T 1ziw_A 528 PIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPA 607 (680)
T ss_dssp CCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHH
T ss_pred cchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhccc
Confidence 2478999999999999999966667799999999999999999987788889999999999999999987777776 5
Q ss_pred cc-CceEEccCCccccccCc
Q 002063 552 LK-LSSIDLSENQLSGSVPL 570 (973)
Q Consensus 552 l~-L~~l~ls~N~l~~~~p~ 570 (973)
++ |+.+++++|+|.|.|+.
T Consensus 608 ~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 608 FRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp HTTCSEEECTTCCCCBCCCC
T ss_pred ccccCEEEccCCCcccCCcc
Confidence 54 99999999999999985
No 10
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=3.1e-54 Score=520.82 Aligned_cols=508 Identities=19% Similarity=0.182 Sum_probs=444.6
Q ss_pred EEeecCCCCCccccccccCCCCCcEEeCCCCcccCccCccccCCCCCcEEEecCCcccCCCC-CcCCCCCCCEEeccCcc
Q 002063 77 EISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVP-DLSALKNLEIFDLSINY 155 (973)
Q Consensus 77 ~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~-~l~~l~~L~~L~Ls~n~ 155 (973)
.++.++.+++ .+|..+.. ++++|+|++|.+++..|..|+++++|++|+|++|++.+..+ .|+++++|++|+|++|.
T Consensus 16 ~~~c~~~~l~-~iP~~l~~--~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~ 92 (606)
T 3t6q_A 16 TYNCENLGLN-EIPGTLPN--STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANP 92 (606)
T ss_dssp EEECTTSCCS-SCCTTSCT--TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred eEECCCCCcc-cCcCCCCC--cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCc
Confidence 5788888888 67776654 79999999999998889999999999999999999988766 59999999999999999
Q ss_pred cCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccccCCCCCChhhhccCCCCeeeccccccccccch
Q 002063 156 FTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPR 235 (973)
Q Consensus 156 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~ 235 (973)
+++..|..|.++++|++|++++|.++... |..++++++|++|++++|++++..+..+..+++|++|++++|++++..|.
T Consensus 93 l~~~~~~~~~~l~~L~~L~L~~n~i~~l~-~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 171 (606)
T 3t6q_A 93 LIFMAETALSGPKALKHLFFIQTGISSID-FIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKE 171 (606)
T ss_dssp CSEECTTTTSSCTTCCEEECTTSCCSCGG-GSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHH
T ss_pred ccccChhhhcccccccEeeccccCcccCC-cchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChh
Confidence 99999999999999999999999997532 56789999999999999999975545555699999999999999988899
Q ss_pred hhhcccccc--EEEeecccCCCCCCccccccccccEEEeeccccc--------------------------cccCCccCC
Q 002063 236 SIRKLQKLW--KIELYANNLTGELPAELGNLTLLQEFDISSNQMY--------------------------GKLPEEIGN 287 (973)
Q Consensus 236 ~l~~l~~L~--~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~--------------------------~~~p~~~~~ 287 (973)
.++.+++|+ .|++++|.+++..|..+.. .+|+.|++++|... ...+..+..
T Consensus 172 ~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~-~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~ 250 (606)
T 3t6q_A 172 DMSSLQQATNLSLNLNGNDIAGIEPGAFDS-AVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEG 250 (606)
T ss_dssp HHHTTTTCCSEEEECTTCCCCEECTTTTTT-CEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGG
T ss_pred hhhhhcccceeEEecCCCccCccChhHhhh-ccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhch
Confidence 999999999 8999999999777766554 68999999887511 011122222
Q ss_pred CC--CccEEEcccCCCCCCCCCCcCCccccceeeccccccCCCCCccccccccccccccccccccccCChhhhhhhhHHH
Q 002063 288 LK--NLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLN 365 (973)
Q Consensus 288 l~--~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ 365 (973)
+. +|+.|++++|.+++..+..|+.+++|+.|++++|+++ .+|..+..+++|++|++++|++++..|..+..++.+..
T Consensus 251 l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 329 (606)
T 3t6q_A 251 LCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTH 329 (606)
T ss_dssp GGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSE
T ss_pred hhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCE
Confidence 22 7999999999999988888999999999999999999 78899999999999999999999888888888877666
Q ss_pred HHhhhccCCCCCCC-cccCccccceEecccccccccC--CccccCCCCcceEeccCCcCCCCCCCccCCCCCCCEEEccc
Q 002063 366 LLALSNNFSGEVPN-SYADCKTIQRLRISDNHLSGKI--PDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQN 442 (973)
Q Consensus 366 ll~l~nn~~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~ 442 (973)
+...+|.+.+.+|. .+..+++|++|++++|.+++.. +..+..+++|+.|++++|++++..+..+..+++|++|++++
T Consensus 330 L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 409 (606)
T 3t6q_A 330 LSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAF 409 (606)
T ss_dssp EECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTT
T ss_pred EECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCC
Confidence 65556777767765 4899999999999999999776 88899999999999999999999999999999999999999
Q ss_pred CCCCCCCCh-hhhcCCCCCEEecCCCcCCCCccccccccccCCEEEccCcccccC---CCccccCccccchhhccccccc
Q 002063 443 NRFSGELPS-ELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGS---IPNEMGDCARIVDLNLARNSLS 518 (973)
Q Consensus 443 N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~Ls~N~l~ 518 (973)
|++.+..|. .+..+++|+.|++++|.+++..|..+..+++|++|+|++|++++. .+..+..+++|+.|++++|+++
T Consensus 410 n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~ 489 (606)
T 3t6q_A 410 TRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLS 489 (606)
T ss_dssp CCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCC
T ss_pred CcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccC
Confidence 999977664 489999999999999999999999999999999999999999872 3467899999999999999999
Q ss_pred cCCCccccccCCCCeeecCCCccCCCCCchhhccc-CceEEccCCccccccCcccccCCC--CccccCCCCCccCc
Q 002063 519 GNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLK-LSSIDLSENQLSGSVPLDFLRMGG--DGAFAGNEGLCLDQ 591 (973)
Q Consensus 519 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-L~~l~ls~N~l~~~~p~~~~~~~~--~~~~~~n~~lc~~~ 591 (973)
+..|..|..+++|+.|+|++|++++.+|..+..++ | .|++++|++++..|..+..+.. .-.+.+||..|..+
T Consensus 490 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 490 SIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGG
T ss_pred ccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCC
Confidence 99999999999999999999999999999999987 8 9999999999888876544332 24678999888554
No 11
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.2e-53 Score=515.60 Aligned_cols=502 Identities=20% Similarity=0.178 Sum_probs=438.5
Q ss_pred EEEeecCCCCCccccccccCCCCCcEEeCCCCcccCccCccccCCCCCcEEEecCCcccCCCC-CcCCCCCCCEEeccCc
Q 002063 76 TEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVP-DLSALKNLEIFDLSIN 154 (973)
Q Consensus 76 ~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~-~l~~l~~L~~L~Ls~n 154 (973)
..++.++.+++ .+|..+. ++|++|+|++|.+++..+..|+++++|++|+|++|.+++.++ .|+++++|++|+|++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n 90 (606)
T 3vq2_A 14 ITYQCMDQKLS-KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGN 90 (606)
T ss_dssp TEEECTTSCCS-SCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTC
T ss_pred CceEccCCCcc-cCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCC
Confidence 46899999998 6777665 899999999999998888899999999999999999999876 5999999999999999
Q ss_pred ccCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccccCCC-CCChhhhccCCCCeeecccccccccc
Q 002063 155 YFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRG-RIPESISELRELGTLDICRNKISGEF 233 (973)
Q Consensus 155 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~-~~p~~l~~l~~L~~L~L~~n~l~~~~ 233 (973)
.+++..|..|.++++|++|++++|.++... |..++++++|++|++++|.+++ .+|..++++++|++|++++|++++..
T Consensus 91 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~-~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~ 169 (606)
T 3vq2_A 91 PIQSFSPGSFSGLTSLENLVAVETKLASLE-SFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTIT 169 (606)
T ss_dssp CCCCCCTTSSTTCTTCCEEECTTSCCCCSS-SSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEEC
T ss_pred cccccChhhcCCcccCCEEEccCCcccccc-ccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecC
Confidence 999988999999999999999999997432 3679999999999999999986 57999999999999999999999888
Q ss_pred chhhhcccccc----EEEeecccCCCCCCccccccccccEEEeeccccc-cccCCccCCCCCccEEEc------------
Q 002063 234 PRSIRKLQKLW----KIELYANNLTGELPAELGNLTLLQEFDISSNQMY-GKLPEEIGNLKNLTVFQC------------ 296 (973)
Q Consensus 234 p~~l~~l~~L~----~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~l------------ 296 (973)
|..++.+++|+ +|++++|.+++..+..+... +|++|++++|.+. +..|..+.++++|+.+++
T Consensus 170 ~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~ 248 (606)
T 3vq2_A 170 VNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLE 248 (606)
T ss_dssp TTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCS
T ss_pred hhhhhhhhccccccceeeccCCCcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCccc
Confidence 88888888776 89999999996555555544 9999999999986 456666777777776665
Q ss_pred ---------------------ccCCCCCCCCCCcCCccccceeeccccccCCCCCccccccccccccccccccccccCCh
Q 002063 297 ---------------------FKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPK 355 (973)
Q Consensus 297 ---------------------~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~ 355 (973)
..|.+.+.+|. +..+++|+.|++++|.+. .+| .+..+++|++|++++|.+ +.+|.
T Consensus 249 ~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~-~l~-~l~~~~~L~~L~l~~n~l-~~lp~ 324 (606)
T 3vq2_A 249 IFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIK-YLE-DVPKHFKWQSLSIIRCQL-KQFPT 324 (606)
T ss_dssp CCCGGGGTTGGGSEEEEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCC-CCC-CCCTTCCCSEEEEESCCC-SSCCC
T ss_pred ccChHHhhhhhhccHhheeccccccccccccc-cccCCCCCEEEecCccch-hhh-hccccccCCEEEcccccC-ccccc
Confidence 66777777777 899999999999999997 455 899999999999999999 68884
Q ss_pred hhhhhhhHHHHHhhhccCCCCCCCcccCccccceEeccccccccc--CCccccCCCCcceEeccCCcCCCCCCCccCCCC
Q 002063 356 YLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGK--IPDGLWALPNVGMLDFGDNDFTGGISPLIGLST 433 (973)
Q Consensus 356 ~~~~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~ 433 (973)
. ..+.+.++....|...+.+ .+..+++|++|++++|.+++. .|..+..+++|+.|++++|.+++.+ ..+..++
T Consensus 325 ~--~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~-~~~~~l~ 399 (606)
T 3vq2_A 325 L--DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAIIMS-ANFMGLE 399 (606)
T ss_dssp C--CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEEEC-CCCTTCT
T ss_pred C--CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCccccch-hhccCCC
Confidence 3 5554433333344355444 678999999999999999876 4889999999999999999998755 7788999
Q ss_pred CCCEEEcccCCCCCCCC-hhhhcCCCCCEEecCCCcCCCCccccccccccCCEEEccCccccc-CCCccccCccccchhh
Q 002063 434 SLSQLVLQNNRFSGELP-SELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTG-SIPNEMGDCARIVDLN 511 (973)
Q Consensus 434 ~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~ 511 (973)
+|+.|++++|++.+..| ..+..+++|++|++++|++++..|..+.++++|++|+|++|++++ .+|..++.+++|+.|+
T Consensus 400 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ 479 (606)
T 3vq2_A 400 ELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLD 479 (606)
T ss_dssp TCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEE
T ss_pred CCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEE
Confidence 99999999999998877 689999999999999999999999999999999999999999998 4899999999999999
Q ss_pred ccccccccCCCccccccCCCCeeecCCCccCCCCCchhhccc-CceEEccCCccccccCcccccCCC---CccccCCCCC
Q 002063 512 LARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLK-LSSIDLSENQLSGSVPLDFLRMGG---DGAFAGNEGL 587 (973)
Q Consensus 512 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-L~~l~ls~N~l~~~~p~~~~~~~~---~~~~~~n~~l 587 (973)
|++|++++..|..|..+++|++|+|++|++++.+|..+..++ |+.|+|++|+++ .+|..+..+.. .-.+.+||..
T Consensus 480 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~ 558 (606)
T 3vq2_A 480 LSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVA 558 (606)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCC
T ss_pred CCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcc
Confidence 999999999999999999999999999999998899999886 999999999999 67776666543 2367999999
Q ss_pred ccCcc
Q 002063 588 CLDQS 592 (973)
Q Consensus 588 c~~~~ 592 (973)
|..+.
T Consensus 559 c~c~~ 563 (606)
T 3vq2_A 559 CICEH 563 (606)
T ss_dssp CSSTT
T ss_pred cCCcc
Confidence 87655
No 12
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=8.8e-52 Score=515.98 Aligned_cols=459 Identities=20% Similarity=0.209 Sum_probs=398.7
Q ss_pred CceEEEeecCCCCCccc-cccccCCCCCcEEeCCCCcccCccCccccCCCCCcEEEecCCcccCCCC-C--cCCCCCCCE
Q 002063 73 GRVTEISFDNKSLSGEI-SSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVP-D--LSALKNLEI 148 (973)
Q Consensus 73 ~~v~~l~l~~~~l~~~~-~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~-~--l~~l~~L~~ 148 (973)
...+.|+|+++...+.+ |..++++++|++|+|++|.+++..|..|+++++|++|+|++|.+.+..+ . ++++++|++
T Consensus 48 ~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~ 127 (844)
T 3j0a_A 48 EQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTR 127 (844)
T ss_dssp CSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCE
T ss_pred ccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCE
Confidence 47889999999888888 6789999999999999999999899999999999999999999988543 3 899999999
Q ss_pred EeccCcccCCccc-cccccccccceEEccCCcCCCCCCcccccCC--CCCCEEEcccccCCCCCChhhhccCC------C
Q 002063 149 FDLSINYFTGRFP-RWVVNLTQLVSLSIGDNVYDEAEIPESIGNL--KNLTYLFLAHCNLRGRIPESISELRE------L 219 (973)
Q Consensus 149 L~Ls~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l--~~L~~L~L~~n~l~~~~p~~l~~l~~------L 219 (973)
|||++|.+++..+ ..|.++++|++|++++|.++.. .|..+..+ ++|+.|++++|.+.+..|..++.+++ |
T Consensus 128 L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~-~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L 206 (844)
T 3j0a_A 128 LDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLV-CEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVL 206 (844)
T ss_dssp EEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCC-CSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCB
T ss_pred EECCCCcccccccchhHhhCCCCCEEECCCCcCCee-CHHHcccccCCccceEECCCCccccccccchhhcCCccccCce
Confidence 9999999987755 6899999999999999998754 46777777 89999999999999988887777766 9
Q ss_pred Ceeeccccccccccchhhhc--------------------------------------cccccEEEeecccCCCCCCccc
Q 002063 220 GTLDICRNKISGEFPRSIRK--------------------------------------LQKLWKIELYANNLTGELPAEL 261 (973)
Q Consensus 220 ~~L~L~~n~l~~~~p~~l~~--------------------------------------l~~L~~L~L~~n~l~~~~~~~l 261 (973)
++|++++|++++..+..+.. .++|+.|+|++|.+++..+..|
T Consensus 207 ~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~ 286 (844)
T 3j0a_A 207 EILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVF 286 (844)
T ss_dssp SEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCS
T ss_pred eEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhh
Confidence 99999999888766655443 2689999999999998888999
Q ss_pred cccccccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCccccceeeccccccCCCCCccccccccccc
Q 002063 262 GNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTD 341 (973)
Q Consensus 262 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~ 341 (973)
..+++|+.|+|++|++.+..|..+..+++|+.|++++|.+++..|..|..+++|+.|++++|.+++..+..|..+++|+.
T Consensus 287 ~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~ 366 (844)
T 3j0a_A 287 ETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQT 366 (844)
T ss_dssp SSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCE
T ss_pred hcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCE
Confidence 99999999999999999888999999999999999999999988999999999999999999999888889999999999
Q ss_pred cccccccccccCChhhhhhhhHHHHHhhhccCCCCCCCcccCccccceEecccccccccCC-ccccCCCCcceEeccCCc
Q 002063 342 VDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIP-DGLWALPNVGMLDFGDND 420 (973)
Q Consensus 342 L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~ 420 (973)
|+|++|.+++ ++. .+. ++.+.+++|....+|.. ..+++.|++++|++++... ..+..+++|+.|+|++|+
T Consensus 367 L~Ls~N~l~~-i~~----~~~-L~~L~l~~N~l~~l~~~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~ 437 (844)
T 3j0a_A 367 LDLRDNALTT-IHF----IPS-IPDIFLSGNKLVTLPKI---NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNR 437 (844)
T ss_dssp EEEETCCSCC-CSS----CCS-CSEEEEESCCCCCCCCC---CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCC
T ss_pred EECCCCCCCc-ccC----CCC-cchhccCCCCccccccc---ccccceeecccCccccCchhhhhhcCCccceeeCCCCc
Confidence 9999999984 332 222 22344455555566654 4679999999999986432 235589999999999999
Q ss_pred CCCCCCC-ccCCCCCCCEEEcccCCCC-----CCCChhhhcCCCCCEEecCCCcCCCCccccccccccCCEEEccCcccc
Q 002063 421 FTGGISP-LIGLSTSLSQLVLQNNRFS-----GELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALT 494 (973)
Q Consensus 421 l~~~~~~-~~~~~~~L~~L~L~~N~l~-----~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 494 (973)
+++.... .+..+++|+.|+|++|.++ +..+..|.++++|+.|+|++|++++..|..|.++++|+.|+|++|+|+
T Consensus 438 l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 517 (844)
T 3j0a_A 438 FSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLT 517 (844)
T ss_dssp CCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCS
T ss_pred ccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCC
Confidence 9977554 4566899999999999997 444567889999999999999999999999999999999999999999
Q ss_pred cCCCccccCccccchhhccccccccCCCccccccCCCCeeecCCCccCCCCC
Q 002063 495 GSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIP 546 (973)
Q Consensus 495 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 546 (973)
+..|..+. ++|+.|+|++|+|++.+|..| .+|+.|+|++|++....+
T Consensus 518 ~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~---~~L~~l~l~~Np~~C~c~ 564 (844)
T 3j0a_A 518 VLSHNDLP--ANLEILDISRNQLLAPNPDVF---VSLSVLDITHNKFICECE 564 (844)
T ss_dssp SCCCCCCC--SCCCEEEEEEECCCCCCSCCC---SSCCEEEEEEECCCCSSS
T ss_pred ccChhhhh--ccccEEECCCCcCCCCChhHh---CCcCEEEecCCCcccccc
Confidence 88877776 899999999999999998765 489999999999987554
No 13
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.9e-51 Score=490.26 Aligned_cols=486 Identities=20% Similarity=0.211 Sum_probs=411.5
Q ss_pred CCceEEEeecCCCCCccccccccCCCCCcEEeCCCCcccCccCccccCCCCCcEEEecCCcccCCCC-CcCCCCCCCEEe
Q 002063 72 TGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVP-DLSALKNLEIFD 150 (973)
Q Consensus 72 ~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~-~l~~l~~L~~L~ 150 (973)
..+++.|+|+++.+++..+..++.+++|++|+|++|++++..|..|+++++|++|+|++|.+.+.++ .|+++++|++|+
T Consensus 27 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (570)
T 2z63_A 27 PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (570)
T ss_dssp CSSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred cccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccc
Confidence 3578999999999998888899999999999999999998878899999999999999999988876 599999999999
Q ss_pred ccCcccCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccccCCCCCChhhhccCCC----Ceeeccc
Q 002063 151 LSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELREL----GTLDICR 226 (973)
Q Consensus 151 Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L----~~L~L~~ 226 (973)
+++|.+++..+..|+++++|++|++++|.++..++|..++++++|++|++++|++++..+..++.+++| +.|++++
T Consensus 107 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~ 186 (570)
T 2z63_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL 186 (570)
T ss_dssp CTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTT
T ss_pred ccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCC
Confidence 999999977776899999999999999999877789999999999999999999998888889999998 8999999
Q ss_pred cccccccchhhhccccccEEEeecccCCC-CCCccccccc--------------------------------cccEEEee
Q 002063 227 NKISGEFPRSIRKLQKLWKIELYANNLTG-ELPAELGNLT--------------------------------LLQEFDIS 273 (973)
Q Consensus 227 n~l~~~~p~~l~~l~~L~~L~L~~n~l~~-~~~~~l~~l~--------------------------------~L~~L~Ls 273 (973)
|.+++..|..+..+ +|++|++++|.... .++..+..++ .++.++++
T Consensus 187 n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~ 265 (570)
T 2z63_A 187 NPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLA 265 (570)
T ss_dssp CCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEE
T ss_pred CCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhh
Confidence 99998878777766 89999999884331 1111222222 24566666
Q ss_pred cc-ccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCccccceeeccccccCCCCCcccccccccccccccccccccc
Q 002063 274 SN-QMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGS 352 (973)
Q Consensus 274 ~N-~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~ 352 (973)
+| .+.+..|..+..+++|+.|++++|.+. .+|..+..+ +|+.|++++|.+. .+|. ..+++|+.|++++|.+.+.
T Consensus 266 ~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~~ 340 (570)
T 2z63_A 266 YLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGNA 340 (570)
T ss_dssp ETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSCCB
T ss_pred cchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCccc-ccCc--ccccccCEEeCcCCccccc
Confidence 66 666677777888888888888888877 577777777 8888888888887 4554 4677788888888877643
Q ss_pred CChhhhhhhhHHHHHhhhccCCCCCCCcccCccccceEecccccccccC--CccccCCCCcceEeccCCcCCCCCCCccC
Q 002063 353 FPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKI--PDGLWALPNVGMLDFGDNDFTGGISPLIG 430 (973)
Q Consensus 353 ~p~~~~~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 430 (973)
++ . ..+++|++|++++|.+++.. |..+..+++|++|++++|++++.++. +.
T Consensus 341 ~~------------------------~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~ 393 (570)
T 2z63_A 341 FS------------------------E--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FL 393 (570)
T ss_dssp CC------------------------C--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EE
T ss_pred cc------------------------c--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-cc
Confidence 22 2 57799999999999998654 78899999999999999999987766 88
Q ss_pred CCCCCCEEEcccCCCCCCCC-hhhhcCCCCCEEecCCCcCCCCccccccccccCCEEEccCcccc-cCCCccccCccccc
Q 002063 431 LSTSLSQLVLQNNRFSGELP-SELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALT-GSIPNEMGDCARIV 508 (973)
Q Consensus 431 ~~~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~ 508 (973)
.+++|++|++++|.+.+..| ..+..+++|++|++++|.+++..|..+.++++|++|+|++|+++ +.+|..+..+++|+
T Consensus 394 ~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~ 473 (570)
T 2z63_A 394 GLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLT 473 (570)
T ss_dssp TCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCC
T ss_pred ccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCC
Confidence 99999999999999997766 57899999999999999999999999999999999999999998 67899999999999
Q ss_pred hhhccccccccCCCccccccCCCCeeecCCCccCCCCCchhhccc-CceEEccCCccccccCcc-----cccCCCCcccc
Q 002063 509 DLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLK-LSSIDLSENQLSGSVPLD-----FLRMGGDGAFA 582 (973)
Q Consensus 509 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-L~~l~ls~N~l~~~~p~~-----~~~~~~~~~~~ 582 (973)
.|+|++|++++..|..|..+++|++|+|++|++++.+|..+..++ |+.|++++|+++|.||.. |.+... ..+.
T Consensus 474 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~wl~~~~-~~~~ 552 (570)
T 2z63_A 474 FLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKNS-QKEQ 552 (570)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTHHHHHHHHHTG-GGEE
T ss_pred EEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcchHHHHHHHHhcc-ccCC
Confidence 999999999998899999999999999999999988888888886 999999999999999964 222211 3455
Q ss_pred CCCCCccCcc
Q 002063 583 GNEGLCLDQS 592 (973)
Q Consensus 583 ~n~~lc~~~~ 592 (973)
+.+ .|..|.
T Consensus 553 ~~~-~C~~~~ 561 (570)
T 2z63_A 553 GSA-KCSGSG 561 (570)
T ss_dssp SCC-BBTTTC
T ss_pred Cch-hhCCCC
Confidence 555 887654
No 14
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=2.3e-51 Score=489.65 Aligned_cols=485 Identities=19% Similarity=0.238 Sum_probs=310.6
Q ss_pred CCCcceeeeCCCCCceEEEeecCCCCCccccccccCCCCCcEEeCCCCcccCccCccccCCCCCcEEEecCCcccCCCC-
Q 002063 60 PCGFSGITCDSVTGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVP- 138 (973)
Q Consensus 60 ~c~w~gv~C~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~- 138 (973)
.|.|.|| |+. ++++++ .+|+.+. ++|++|+|++|++++..|..|+++++|++|+|++|++.+.++
T Consensus 3 ~C~~~~~-c~~----------~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~ 68 (549)
T 2z81_A 3 SCDASGV-CDG----------RSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGD 68 (549)
T ss_dssp EECTTSE-EEC----------TTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTT
T ss_pred cCCCCce-EEC----------CCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChh
Confidence 4999998 853 233333 3444332 456666666666655555556666666666666666655543
Q ss_pred CcCCCCCCCEEeccCcccCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccccCCCCC-ChhhhccC
Q 002063 139 DLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRI-PESISELR 217 (973)
Q Consensus 139 ~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~-p~~l~~l~ 217 (973)
.|+++++|++|||++|.+++..|..|+++++|++|++++|.++...+|..++++++|++|++++|.+.+.+ +..+.+++
T Consensus 69 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~ 148 (549)
T 2z81_A 69 AFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLT 148 (549)
T ss_dssp TTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCC
T ss_pred hccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhccc
Confidence 35556666666666666655555555666666666666665554444555555666666666666533233 24555566
Q ss_pred CCCeeeccccccccccchhhhccccccEEEeecccCCCCCCcc-ccccccccEEEeecccccccc--CC-ccCCCCCccE
Q 002063 218 ELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAE-LGNLTLLQEFDISSNQMYGKL--PE-EIGNLKNLTV 293 (973)
Q Consensus 218 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~-l~~l~~L~~L~Ls~N~l~~~~--p~-~~~~l~~L~~ 293 (973)
+|++|++++|++++..|..++.+++|++|+++.|.+. .+|.. +..+++|++|++++|++++.. |. ....+++|+.
T Consensus 149 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~ 227 (549)
T 2z81_A 149 SLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKK 227 (549)
T ss_dssp EEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCE
T ss_pred ccCeeeccCCcccccChhhhhccccCceEecccCccc-ccchhhHhhcccccEEEccCCccccccccccchhhhhhcccc
Confidence 6666666666665555555666666666666655554 22322 234555666666666555421 11 1223455555
Q ss_pred EEcccCCCCCCCC----CCcCCccccceeeccccccCCCC------Ccccccccccccccccccccccc-----CChhhh
Q 002063 294 FQCFKNNFSGEFP----SGFGDMRKLFAFSIYGNRFSGPF------PENLGRYTALTDVDISENQFSGS-----FPKYLC 358 (973)
Q Consensus 294 L~l~~N~l~~~~p----~~~~~l~~L~~L~l~~N~l~~~~------~~~l~~l~~L~~L~Ls~N~l~~~-----~p~~~~ 358 (973)
|++++|.+.+..+ ..+..+++|+.+++++|.+.+.. ...+..+.+|+.|+++++.+... ++...
T Consensus 228 L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~- 306 (549)
T 2z81_A 228 LAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVY- 306 (549)
T ss_dssp EEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHH-
T ss_pred eeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhh-
Confidence 5555555544222 22334455555555555544321 11233444455555555443311 01000
Q ss_pred hhhhHHHHHhhhccCCCCCCCcc-cCccccceEecccccccccCC---ccccCCCCcceEeccCCcCCCCCC--CccCCC
Q 002063 359 EKRKLLNLLALSNNFSGEVPNSY-ADCKTIQRLRISDNHLSGKIP---DGLWALPNVGMLDFGDNDFTGGIS--PLIGLS 432 (973)
Q Consensus 359 ~~~~ll~ll~l~nn~~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~L~~N~l~~~~~--~~~~~~ 432 (973)
.....++.+.++++..+.+|..+ ..+++|++|+|++|++.+.+| ..+..+++|+.|++++|++++... ..+..+
T Consensus 307 ~~~~~L~~L~l~~n~l~~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l 386 (549)
T 2z81_A 307 SLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTL 386 (549)
T ss_dssp HHSTTCCEEEEESSCCCCCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGC
T ss_pred hhcccceEEEeccCccccCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcC
Confidence 00111122223333334555554 468999999999999998764 447789999999999999987653 457889
Q ss_pred CCCCEEEcccCCCCCCCChhhhcCCCCCEEecCCCcCCCCccccccccccCCEEEccCcccccCCCccccCccccchhhc
Q 002063 433 TSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNL 512 (973)
Q Consensus 433 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 512 (973)
++|++|+|++|+++ .+|..+..+++|++|++++|+++ .+|..+. ++|++|+|++|+|++.+ ..+++|+.|+|
T Consensus 387 ~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~~--~~L~~L~Ls~N~l~~~~----~~l~~L~~L~L 458 (549)
T 2z81_A 387 KNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCIP--QTLEVLDVSNNNLDSFS----LFLPRLQELYI 458 (549)
T ss_dssp TTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCS-CCCTTSC--TTCSEEECCSSCCSCCC----CCCTTCCEEEC
T ss_pred CCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcc-cccchhc--CCceEEECCCCChhhhc----ccCChhcEEEC
Confidence 99999999999999 68888999999999999999998 4444432 68999999999999753 57899999999
Q ss_pred cccccccCCCccccccCCCCeeecCCCccCCCCCchhhccc-CceEEccCCccccccCc
Q 002063 513 ARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLK-LSSIDLSENQLSGSVPL 570 (973)
Q Consensus 513 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-L~~l~ls~N~l~~~~p~ 570 (973)
++|+|+ .+|. ...+++|++|+|++|+|++.+|..+..++ |+.|++++|+|.|.||.
T Consensus 459 s~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 515 (549)
T 2z81_A 459 SRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 515 (549)
T ss_dssp CSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHHH
T ss_pred CCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCcc
Confidence 999999 6776 57899999999999999998888888886 99999999999999994
No 15
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=3.3e-51 Score=443.39 Aligned_cols=262 Identities=22% Similarity=0.320 Sum_probs=213.6
Q ss_pred hcCCcccCeecccCcEEEEEEEEc-----CCCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCee
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLK-----KNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSS 746 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~-----~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 746 (973)
..++++.++||+|+||+||+|++. .+++.||||++... ...++|.+|+.++++++|||||++++++.+++..
T Consensus 25 ~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~ 104 (308)
T 4gt4_A 25 LSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPL 104 (308)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEE
Confidence 345677889999999999999974 35678999998652 3457899999999999999999999999999999
Q ss_pred EEEEEccCCCchHHHHHhhhcC-----------CCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCC
Q 002063 747 FLVLEYMPNGNLFQALHKRVKE-----------GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDED 815 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~-----------~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~ 815 (973)
++|||||++|+|.+++..+... ....++|..+..++.|||+||+||| +++||||||||+|||++++
T Consensus 105 ~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLK~~NILl~~~ 181 (308)
T 4gt4_A 105 SMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDK 181 (308)
T ss_dssp EEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGG
T ss_pred EEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCccccceEECCC
Confidence 9999999999999999764211 1235899999999999999999999 7899999999999999999
Q ss_pred CceEEecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHH
Q 002063 816 YEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYW 894 (973)
Q Consensus 816 ~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~ 894 (973)
+.+||+|||+++...............||++|||||++.++.|+.++|||||||++|||+| |+.||.+. ...++...
T Consensus 182 ~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~--~~~~~~~~ 259 (308)
T 4gt4_A 182 LNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY--SNQDVVEM 259 (308)
T ss_dssp GCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTC--CHHHHHHH
T ss_pred CCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCC--CHHHHHHH
Confidence 9999999999987654433333445679999999999999999999999999999999998 89999754 22222222
Q ss_pred HHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002063 895 VSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
+.. ... ...+.+++..+.+++.+||+.||++|||++||+++|+.+.+
T Consensus 260 i~~----~~~----------~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~n 306 (308)
T 4gt4_A 260 IRN----RQV----------LPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWGN 306 (308)
T ss_dssp HHT----TCC----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCC
T ss_pred HHc----CCC----------CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhccC
Confidence 211 110 11122345568899999999999999999999999998754
No 16
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=3.5e-51 Score=447.47 Aligned_cols=262 Identities=24% Similarity=0.358 Sum_probs=205.7
Q ss_pred cCCcccCeecccCcEEEEEEEEc-----CCCceEEEEEeecc--ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLK-----KNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~-----~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
.+|.+.++||+|+||+||+|++. .+++.||||+++.. ...++|.+|++++++++|||||++++++.+++..|+
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 45678899999999999999975 35788999998763 345679999999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcC----------CCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCce
Q 002063 749 VLEYMPNGNLFQALHKRVKE----------GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEP 818 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~----------~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~ 818 (973)
|||||++|+|.++++.+... ....++|.++..++.|||+||+||| +++||||||||+|||+++++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA---GLHFVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHhhEEECCCCcE
Confidence 99999999999999864221 2346899999999999999999999 7899999999999999999999
Q ss_pred EEecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHH
Q 002063 819 KIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVST 897 (973)
Q Consensus 819 kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~ 897 (973)
||+|||+++...............||+.|||||++.+..|+.++|||||||++|||+| |+.||.... .......+.
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~--~~~~~~~i~- 274 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLS--NTEAIDCIT- 274 (329)
T ss_dssp EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSC--HHHHHHHHH-
T ss_pred EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCC--HHHHHHHHH-
Confidence 9999999987654443333345679999999999999999999999999999999999 899997541 112221111
Q ss_pred hhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCC
Q 002063 898 HLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPC 956 (973)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~ 956 (973)
.... ...+..+++++.+++.+||+.||++|||++||+++|+.+...
T Consensus 275 --~g~~-----------~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 275 --QGRE-----------LERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp --HTCC-----------CCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred --cCCC-----------CCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 1110 111223345688999999999999999999999999987644
No 17
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.7e-51 Score=443.57 Aligned_cols=261 Identities=26% Similarity=0.398 Sum_probs=211.8
Q ss_pred cCCcccCeecccCcEEEEEEEEc-----CCCceEEEEEeecc--ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLK-----KNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~-----~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
++|.+.+.||+|+||+||+|++. .++..||||+++.. ...++|.+|++++++++|||||++++++.+++..|+
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 46788899999999999999975 35788999998763 345679999999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhh--------cCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEE
Q 002063 749 VLEYMPNGNLFQALHKRV--------KEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKI 820 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~--------~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 820 (973)
|||||++|+|.++++.+. ......++|..+..++.|||+||+||| +++||||||||+|||+++++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccCHhhEEECCCCcEEE
Confidence 999999999999998642 123456899999999999999999999 789999999999999999999999
Q ss_pred ecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhh
Q 002063 821 ADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHL 899 (973)
Q Consensus 821 ~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~ 899 (973)
+|||+|+...............||+.|||||++.+..|+.++|||||||++|||+| |+.||... ...++...+..
T Consensus 170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~--~~~~~~~~i~~-- 245 (299)
T 4asz_A 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQL--SNNEVIECITQ-- 245 (299)
T ss_dssp CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS--CHHHHHHHHHH--
T ss_pred CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCC--CHHHHHHHHHc--
Confidence 99999987654433333334568999999999999999999999999999999999 89999754 11122222111
Q ss_pred cccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002063 900 NNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
... ...+..++.++.+++.+||+.||++|||++||.+.|+++..
T Consensus 246 -~~~-----------~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~ 289 (299)
T 4asz_A 246 -GRV-----------LQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAK 289 (299)
T ss_dssp -TCC-----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -CCC-----------CCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 110 01122344568899999999999999999999999987653
No 18
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=3.7e-50 Score=432.77 Aligned_cols=260 Identities=28% Similarity=0.420 Sum_probs=202.5
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeec----cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK----GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~----~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 751 (973)
+++++.++||+|+||+||+|++.. .||||+++. ....+.|.+|++++++++|||||++++++.+ +..|+|||
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~~---~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmE 111 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECC---cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEE
Confidence 467889999999999999998753 599998864 2345679999999999999999999998754 56899999
Q ss_pred ccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccC
Q 002063 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~ 831 (973)
||++|+|.++++.. ...++|..+..++.|||+||+||| +++||||||||+|||+++++.+||+|||+|+....
T Consensus 112 y~~gGsL~~~l~~~----~~~l~~~~~~~i~~qia~gL~yLH---~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~ 184 (307)
T 3omv_A 112 WCEGSSLYKHLHVQ----ETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR 184 (307)
T ss_dssp CCSSCBHHHHHHTS----CCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCSSSEEEETTEEEEECCCSSCBC---
T ss_pred cCCCCCHHHHHhhc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCccCHHHEEECCCCcEEEeeccCceeccc
Confidence 99999999999753 346899999999999999999999 78999999999999999999999999999987654
Q ss_pred CCCcccccccCccccccccccccc---CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhh
Q 002063 832 SPKVSDYSCFAGTHGYIAPELAYT---CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKV 908 (973)
Q Consensus 832 ~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (973)
...........||+.|||||++.+ +.|+.++|||||||++|||+||+.||.... .. ..+........
T Consensus 185 ~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~--~~---~~~~~~~~~~~----- 254 (307)
T 3omv_A 185 WSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHIN--NR---DQIIFMVGRGY----- 254 (307)
T ss_dssp ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC--CH---HHHHHHHHTTC-----
T ss_pred CCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCC--hH---HHHHHHHhcCC-----
Confidence 433333445689999999999864 468999999999999999999999997531 11 11111111110
Q ss_pred ccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCCC
Q 002063 909 LDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPCT 957 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~ 957 (973)
..+.. ...+.+++..+.+++.+||+.||++|||+.||+++|+.++...
T Consensus 255 ~~p~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~l 302 (307)
T 3omv_A 255 ASPDL-SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp CCCCS-TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred CCCCc-ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccC
Confidence 00100 1112234556889999999999999999999999998876543
No 19
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=2.6e-50 Score=439.86 Aligned_cols=251 Identities=22% Similarity=0.330 Sum_probs=204.3
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 750 (973)
+++|++.+.||+|+||+||+|+++.+|+.||||++... ...+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm 102 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM 102 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 56899999999999999999999999999999998753 34567899999999999999999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcccc
Q 002063 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~ 830 (973)
|||+||+|.+++... ....+++..+..++.||+.||+||| +++||||||||+|||++.+|.+||+|||+|+...
T Consensus 103 Ey~~gg~L~~~i~~~---~~~~~~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~ 176 (350)
T 4b9d_A 103 DYCEGGDLFKRINAQ---KGVLFQEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLN 176 (350)
T ss_dssp ECCTTCBHHHHHHHT---TTCCCCHHHHHHHHHHHHHHHHHHH---HTTCEETTCCGGGEEECTTCCEEECSTTEESCCC
T ss_pred eCCCCCcHHHHHHHc---CCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCCEEEcccccceeec
Confidence 999999999999753 3345788899999999999999999 7899999999999999999999999999998664
Q ss_pred CCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhcc
Q 002063 831 NSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLD 910 (973)
Q Consensus 831 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (973)
... ......+||+.|||||++.+..|+.++||||+||++|||++|+.||... +....+........
T Consensus 177 ~~~--~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~-----~~~~~~~~i~~~~~------- 242 (350)
T 4b9d_A 177 STV--ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAG-----SMKNLVLKIISGSF------- 242 (350)
T ss_dssp HHH--HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS-----SHHHHHHHHHHTCC-------
T ss_pred CCc--ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc-----CHHHHHHHHHcCCC-------
Confidence 321 1123457999999999999999999999999999999999999999653 22222222211111
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 911 CEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 911 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
+ .........+.+++.+||+.||++|||+.|+++|
T Consensus 243 ~----~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 243 P----PVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp C----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred C----CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0 0112234568899999999999999999999875
No 20
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=5.5e-50 Score=429.83 Aligned_cols=247 Identities=24% Similarity=0.339 Sum_probs=210.3
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeec-----cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK-----GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~-----~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 750 (973)
++|++.+.||+|+||+||+|+++.+++.||||++.+ ....+.+.+|++++++++|||||+++++|++++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 469999999999999999999999999999999875 345677899999999999999999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcccc
Q 002063 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~ 830 (973)
||++||+|.+++.+. ..+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+.+.
T Consensus 112 Ey~~gG~L~~~i~~~-----~~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~ 183 (311)
T 4aw0_A 112 SYAKNGELLKYIRKI-----GSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS 183 (311)
T ss_dssp CCCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred ecCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEEcCCCCEEEEEcCCceecC
Confidence 999999999999864 35889999999999999999999 7899999999999999999999999999999876
Q ss_pred CCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhcc
Q 002063 831 NSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLD 910 (973)
Q Consensus 831 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (973)
...........+||+.|||||++.+..|+.++||||+||++|||++|+.||... +..............+
T Consensus 184 ~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~-----~~~~~~~~i~~~~~~~----- 253 (311)
T 4aw0_A 184 PESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG-----NEGLIFAKIIKLEYDF----- 253 (311)
T ss_dssp TTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHTCCCC-----
T ss_pred CCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHHcCCCCC-----
Confidence 544444445578999999999999999999999999999999999999999653 2222222222111111
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHH
Q 002063 911 CEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVV 947 (973)
Q Consensus 911 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl 947 (973)
+.....++.+++.+|++.||++|||+.|++
T Consensus 254 -------p~~~s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 254 -------PEKFFPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp -------CTTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred -------CcccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence 112344678999999999999999999863
No 21
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.3e-49 Score=470.93 Aligned_cols=457 Identities=21% Similarity=0.255 Sum_probs=396.7
Q ss_pred EEEeecCCCCCccccccccCCCCCcEEeCCCCcccCccCccccCCCCCcEEEecCCcccCCCC-CcCCCCCCCEEeccCc
Q 002063 76 TEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVP-DLSALKNLEIFDLSIN 154 (973)
Q Consensus 76 ~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~-~l~~l~~L~~L~Ls~n 154 (973)
+.+|+++++++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|++.+.++ .|+++++|++|||++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 46899999999 6888777 899999999999998888899999999999999999998865 6999999999999999
Q ss_pred ccCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccccCCCCCChhhhccCCC--Ceeecccccc--c
Q 002063 155 YFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELREL--GTLDICRNKI--S 230 (973)
Q Consensus 155 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L--~~L~L~~n~l--~ 230 (973)
+++ .+|.. .+++|++|++++|.++...+|..++++++|++|++++|++++ ..+..+++| ++|++++|++ .
T Consensus 80 ~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~ 153 (520)
T 2z7x_B 80 KLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGE 153 (520)
T ss_dssp CCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTS
T ss_pred cee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeeccccccc
Confidence 999 56666 899999999999999877789999999999999999999986 567888888 9999999999 8
Q ss_pred cccchhhhccc-cccEEEeecccCCCCCCc-cccccccccEEEeeccc-------cccccCCccCCCCCccEEEcccCCC
Q 002063 231 GEFPRSIRKLQ-KLWKIELYANNLTGELPA-ELGNLTLLQEFDISSNQ-------MYGKLPEEIGNLKNLTVFQCFKNNF 301 (973)
Q Consensus 231 ~~~p~~l~~l~-~L~~L~L~~n~l~~~~~~-~l~~l~~L~~L~Ls~N~-------l~~~~p~~~~~l~~L~~L~l~~N~l 301 (973)
+..|..+..+. +...+++++|.+.+.++. .+.++++|+.|++++|. +.+.+| .++.+++|+.|++++|.+
T Consensus 154 ~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l 232 (520)
T 2z7x_B 154 KEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIET 232 (520)
T ss_dssp SCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEE
T ss_pred ccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhcccccccc
Confidence 88898888876 455678889998876654 57889999999999998 777776 789999999999999998
Q ss_pred CCCCCCCcC---CccccceeeccccccCCCCCccc-----cccccccccccccccccccCC-hhhhhhhhHHHHHhhhcc
Q 002063 302 SGEFPSGFG---DMRKLFAFSIYGNRFSGPFPENL-----GRYTALTDVDISENQFSGSFP-KYLCEKRKLLNLLALSNN 372 (973)
Q Consensus 302 ~~~~p~~~~---~l~~L~~L~l~~N~l~~~~~~~l-----~~l~~L~~L~Ls~N~l~~~~p-~~~~~~~~ll~ll~l~nn 372 (973)
++..+..+. ..++|++|++++|++++.+|..+ +.+++|+.+++++|.+ .+| ..++...
T Consensus 233 ~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~----------- 299 (520)
T 2z7x_B 233 TWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIF----------- 299 (520)
T ss_dssp EHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHH-----------
T ss_pred CHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhccc-----------
Confidence 764332211 23589999999999999999998 9999999999999999 566 4443221
Q ss_pred CCCCCCCcccCccccceEecccccccccCCccccCCCCcceEeccCCcCCCCCCCccCCCCCCCEEEcccCCCCC--CCC
Q 002063 373 FSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSG--ELP 450 (973)
Q Consensus 373 ~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~--~~p 450 (973)
...+|+.|++++|.+.+.. .+..+++|++|++++|++++..+..++.+++|++|+|++|++++ .+|
T Consensus 300 ----------~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~ 367 (520)
T 2z7x_B 300 ----------SNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIA 367 (520)
T ss_dssp ----------HTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHH
T ss_pred ----------ccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccch
Confidence 1157999999999987432 22688999999999999999889999999999999999999996 566
Q ss_pred hhhhcCCCCCEEecCCCcCCCCccc-cccccccCCEEEccCcccccCCCccccCccccchhhccccccccCCCccccccC
Q 002063 451 SELGRLTNLERLILTNNNFSGKIPS-ALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLS 529 (973)
Q Consensus 451 ~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 529 (973)
..++.+++|++|+|++|++++.+|. .+..+++|++|+|++|++++..|..+. ++|+.|+|++|+|+ .+|..+..++
T Consensus 368 ~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~ 444 (520)
T 2z7x_B 368 EMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLE 444 (520)
T ss_dssp HHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCT
T ss_pred HHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCC
Confidence 7899999999999999999985665 588999999999999999988887765 78999999999999 7888888999
Q ss_pred CCCeeecCCCccCCCCCch-hhccc-CceEEccCCccccccCcc
Q 002063 530 SLNALNLSGNKLTGSIPDN-LMKLK-LSSIDLSENQLSGSVPLD 571 (973)
Q Consensus 530 ~L~~L~L~~N~l~~~~p~~-~~~l~-L~~l~ls~N~l~~~~p~~ 571 (973)
+|++|+|++|+|+ .+|.. +..++ |+.|++++|+++|.|+..
T Consensus 445 ~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~~~ 487 (520)
T 2z7x_B 445 ALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 487 (520)
T ss_dssp TCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHHHH
T ss_pred CCCEEECCCCcCC-ccCHHHhccCCcccEEECcCCCCcccCCch
Confidence 9999999999999 56665 77776 999999999999999864
No 22
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=8.4e-50 Score=435.10 Aligned_cols=249 Identities=24% Similarity=0.361 Sum_probs=209.1
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeec--cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEcc
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK--GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~--~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
..|+..++||+|+||+||+|+++.+|+.||||++.. ....+.+.+|++++++++|||||+++++|.+++..|+|||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 468889999999999999999999999999999865 334566889999999999999999999999999999999999
Q ss_pred CCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCC
Q 002063 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~ 833 (973)
++|+|.+++... .+++..+..++.||+.||+||| +++||||||||+|||++.+|.+||+|||+|+......
T Consensus 154 ~gg~L~~~l~~~------~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 224 (346)
T 4fih_A 154 EGGALTDIVTHT------RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV 224 (346)
T ss_dssp TTEEHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS
T ss_pred CCCcHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEECCCCCEEEecCcCceecCCCC
Confidence 999999999752 4899999999999999999999 7899999999999999999999999999998765432
Q ss_pred CcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccc
Q 002063 834 KVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEV 913 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (973)
. .....+||+.|||||++.+..|+.++||||+||++|||++|+.||... +............. +.
T Consensus 225 ~--~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~-----~~~~~~~~i~~~~~-------~~- 289 (346)
T 4fih_A 225 P--RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE-----PPLKAMKMIRDNLP-------PR- 289 (346)
T ss_dssp C--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS-----CHHHHHHHHHHSSC-------CC-
T ss_pred C--cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc-----CHHHHHHHHHcCCC-------CC-
Confidence 2 233468999999999999999999999999999999999999999653 11111111111111 00
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 914 ASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 914 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
..........+.+++.+||+.||++|||+.|+++|
T Consensus 290 -~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 290 -LKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp -CSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -CCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 11122334568899999999999999999999986
No 23
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=2.9e-49 Score=429.71 Aligned_cols=254 Identities=21% Similarity=0.252 Sum_probs=207.3
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccC
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMP 754 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 754 (973)
...|+..++||+|+||+||+|+++.+|+.||||++..+.. ..+|++++++++|||||++++++.+++..|+|||||+
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~---~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~ 133 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF---RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLE 133 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC---CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCT
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh---HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccC
Confidence 4567888999999999999999999999999999976432 2479999999999999999999999999999999999
Q ss_pred CCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCC-ceEEecccCCccccCCC
Q 002063 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDY-EPKIADFGVAKIAENSP 833 (973)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~-~~kl~Dfgl~~~~~~~~ 833 (973)
||+|.++++.. ..+++..+..++.||+.||+||| +++||||||||+|||++.+| .+||+|||+|+......
T Consensus 134 gg~L~~~l~~~-----~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~ 205 (336)
T 4g3f_A 134 GGSLGQLIKQM-----GCLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDG 205 (336)
T ss_dssp TCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC----
T ss_pred CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCC
Confidence 99999999864 35899999999999999999999 88999999999999999988 69999999998775432
Q ss_pred Ccc---cccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhcc
Q 002063 834 KVS---DYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLD 910 (973)
Q Consensus 834 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (973)
... .....+||+.|||||++.+..|+.++||||+||++|||++|+.||..... ......+.. .....
T Consensus 206 ~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~--~~~~~~i~~---~~~~~----- 275 (336)
T 4g3f_A 206 LGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFR--GPLCLKIAS---EPPPI----- 275 (336)
T ss_dssp --------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCC--SCCHHHHHH---SCCGG-----
T ss_pred cccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH--HHHHHHHHc---CCCCc-----
Confidence 211 22335799999999999999999999999999999999999999976422 122211111 11100
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcC
Q 002063 911 CEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADA 953 (973)
Q Consensus 911 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 953 (973)
...+......+.+++.+||+.||.+|||+.|+++++...
T Consensus 276 ----~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~ 314 (336)
T 4g3f_A 276 ----REIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKA 314 (336)
T ss_dssp ----GGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ----hhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHH
Confidence 011223445688999999999999999999999888653
No 24
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.2e-48 Score=463.95 Aligned_cols=476 Identities=20% Similarity=0.227 Sum_probs=397.3
Q ss_pred EeecCCCCCccccccccCCCCCcEEeCCCCcccCccCccccCCCCCcEEEecCCcccCCCC-CcCCCCCCCEEeccCccc
Q 002063 78 ISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVP-DLSALKNLEIFDLSINYF 156 (973)
Q Consensus 78 l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~-~l~~l~~L~~L~Ls~n~l 156 (973)
++.++.+++ .+|..+. +++++|+|++|.+++..+..|.++++|++|+|++|++.+.++ .|+++++|++|+|++|.+
T Consensus 12 ~~c~~~~l~-~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l 88 (570)
T 2z63_A 12 YQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 88 (570)
T ss_dssp EECCSSCCS-SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred EEeCCCCcc-ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcC
Confidence 445555555 4565443 579999999999998888899999999999999999998876 499999999999999999
Q ss_pred CCccccccccccccceEEccCCcCCCCCCcc-cccCCCCCCEEEcccccCCC-CCChhhhccCCCCeeeccccccccccc
Q 002063 157 TGRFPRWVVNLTQLVSLSIGDNVYDEAEIPE-SIGNLKNLTYLFLAHCNLRG-RIPESISELRELGTLDICRNKISGEFP 234 (973)
Q Consensus 157 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~-~~~~l~~L~~L~L~~n~l~~-~~p~~l~~l~~L~~L~L~~n~l~~~~p 234 (973)
++..|..|.++++|++|++++|.++. +|. .++++++|++|++++|.+++ .+|..++++++|++|++++|++++..+
T Consensus 89 ~~~~~~~~~~l~~L~~L~L~~n~l~~--l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~ 166 (570)
T 2z63_A 89 QSLALGAFSGLSSLQKLVAVETNLAS--LENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYC 166 (570)
T ss_dssp CEECTTTTTTCTTCCEEECTTSCCCC--STTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECG
T ss_pred CccCHhhhcCcccccccccccccccc--CCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecH
Confidence 98888999999999999999999874 333 58999999999999999997 479999999999999999999998888
Q ss_pred hhhhccccc----cEEEeecccCCCCCCccccccccccEEEeecccccc-ccCCccCCCCC-------------------
Q 002063 235 RSIRKLQKL----WKIELYANNLTGELPAELGNLTLLQEFDISSNQMYG-KLPEEIGNLKN------------------- 290 (973)
Q Consensus 235 ~~l~~l~~L----~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~------------------- 290 (973)
..++.+++| +.|++++|.+++..|..+..+ +|+.|++++|.... .++..+..+++
T Consensus 167 ~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~ 245 (570)
T 2z63_A 167 TDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEK 245 (570)
T ss_dssp GGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEE
T ss_pred HHccchhccchhhhhcccCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhh
Confidence 999999999 899999999998878777766 89999999984321 12222223333
Q ss_pred -------------ccEEEcccC-CCCCCCCCCcCCccccceeeccccccCCCCCccccccccccccccccccccccCChh
Q 002063 291 -------------LTVFQCFKN-NFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKY 356 (973)
Q Consensus 291 -------------L~~L~l~~N-~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~ 356 (973)
++.++++++ .+.+..|..+..+++|+.|++++|.++ .+|..+..+ +|+.|++++|.+.
T Consensus 246 ~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~------ 317 (570)
T 2z63_A 246 FDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG------ 317 (570)
T ss_dssp CCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS------
T ss_pred cchhhhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCccc------
Confidence 344555555 556666777777777777777777776 466666666 7777777777766
Q ss_pred hhhhhhHHHHHhhhccCCCCCCCcccCccccceEecccccccccCCccccCCCCcceEeccCCcCCCCC--CCccCCCCC
Q 002063 357 LCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGI--SPLIGLSTS 434 (973)
Q Consensus 357 ~~~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~~~~ 434 (973)
.+|. ..+++|++|++++|.+.+..+. ..+++|+.|++++|++++.. +..+..+++
T Consensus 318 -------------------~l~~--~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~ 374 (570)
T 2z63_A 318 -------------------QFPT--LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTS 374 (570)
T ss_dssp -------------------SCCB--CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSC
T ss_pred -------------------ccCc--ccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCc
Confidence 3333 4678999999999999877665 78999999999999998765 566788999
Q ss_pred CCEEEcccCCCCCCCChhhhcCCCCCEEecCCCcCCCCcc-ccccccccCCEEEccCcccccCCCccccCccccchhhcc
Q 002063 435 LSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIP-SALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLA 513 (973)
Q Consensus 435 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 513 (973)
|++|++++|.+.+..+ .+..+++|+.|++++|++++..| ..+.++++|++|++++|++++..|..+.++++|+.|+|+
T Consensus 375 L~~L~l~~n~l~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 453 (570)
T 2z63_A 375 LKYLDLSFNGVITMSS-NFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMA 453 (570)
T ss_dssp CCEEECCSCSEEEEEE-EEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECT
T ss_pred cCEEECCCCccccccc-cccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECc
Confidence 9999999999996544 49999999999999999997766 578999999999999999999999999999999999999
Q ss_pred ccccc-cCCCccccccCCCCeeecCCCccCCCCCchhhccc-CceEEccCCccccccCcccccCCCC--ccccCCCCCcc
Q 002063 514 RNSLS-GNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLK-LSSIDLSENQLSGSVPLDFLRMGGD--GAFAGNEGLCL 589 (973)
Q Consensus 514 ~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-L~~l~ls~N~l~~~~p~~~~~~~~~--~~~~~n~~lc~ 589 (973)
+|.++ +.+|..+..+++|+.|+|++|++++..|..+..++ |+.|++++|++++..|..+..+..- -.+.+|+..|.
T Consensus 454 ~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 533 (570)
T 2z63_A 454 GNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 533 (570)
T ss_dssp TCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCC
Confidence 99998 67999999999999999999999988899998886 9999999999998877666555442 35688887775
Q ss_pred Cc
Q 002063 590 DQ 591 (973)
Q Consensus 590 ~~ 591 (973)
.+
T Consensus 534 ~~ 535 (570)
T 2z63_A 534 CP 535 (570)
T ss_dssp TT
T ss_pred Cc
Confidence 44
No 25
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=6.1e-49 Score=420.22 Aligned_cols=245 Identities=25% Similarity=0.326 Sum_probs=197.9
Q ss_pred cccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEe----CCeeEEEE
Q 002063 679 EEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLK----GGSSFLVL 750 (973)
Q Consensus 679 ~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~----~~~~~lv~ 750 (973)
++.++||+|+||+||+|++..+++.||||++... ...+.|.+|++++++++|||||+++++|.+ +...|+||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 5667899999999999999999999999998753 345678999999999999999999999865 34589999
Q ss_pred EccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCC--eEecCCCCCCeeecC-CCceEEecccCCc
Q 002063 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPP--IIHRDIKSSNILLDE-DYEPKIADFGVAK 827 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~--ivH~Dlkp~Nill~~-~~~~kl~Dfgl~~ 827 (973)
|||++|+|.+++.+. ..+++..+..++.||+.||+||| +++ ||||||||+|||++. ++.+||+|||+|+
T Consensus 109 Ey~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~ylH---~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~ 180 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRF-----KVMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180 (290)
T ss_dssp ECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred eCCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCCEEecccChhheeEECCCCCEEEEeCcCCE
Confidence 999999999999864 35889999999999999999999 566 999999999999985 7999999999997
Q ss_pred cccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchh
Q 002063 828 IAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLK 907 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
..... .....+||+.|||||++.+ .|+.++|||||||++|||+||+.||.+.. ..............
T Consensus 181 ~~~~~----~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~----~~~~~~~~i~~~~~---- 247 (290)
T 3fpq_A 181 LKRAS----FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQ----NAAQIYRRVTSGVK---- 247 (290)
T ss_dssp GCCTT----SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCS----SHHHHHHHHTTTCC----
T ss_pred eCCCC----ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCC----cHHHHHHHHHcCCC----
Confidence 54322 2234679999999999865 69999999999999999999999996431 11122111111110
Q ss_pred hccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 908 VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
....+....+++.+++.+||+.||++|||++|+++|-
T Consensus 248 ------~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp 284 (290)
T 3fpq_A 248 ------PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHA 284 (290)
T ss_dssp ------CGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred ------CCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCc
Confidence 0011112234578899999999999999999999863
No 26
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.4e-48 Score=413.48 Aligned_cols=248 Identities=26% Similarity=0.335 Sum_probs=194.6
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEE
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
.+++|++.+.||+|+||+||+|+++.+++.||||++.+. ...+.+.+|++++++++|||||++++++.+++..|+
T Consensus 11 ~ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~i 90 (275)
T 3hyh_A 11 HIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIM 90 (275)
T ss_dssp ---CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred EeeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 357899999999999999999999999999999998652 345678999999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcc
Q 002063 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||+ +|+|.+++..+ ..+++..+..++.|++.||+||| +++|+||||||+|||++.++.+||+|||+|+.
T Consensus 91 vmEy~-~g~L~~~l~~~-----~~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~ 161 (275)
T 3hyh_A 91 VIEYA-GNELFDYIVQR-----DKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNI 161 (275)
T ss_dssp EEECC-CEEHHHHHHHS-----CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTCCEEECCSSCC--
T ss_pred EEeCC-CCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCChHHeEECCCCCEEEeecCCCee
Confidence 99999 78999999753 35899999999999999999999 78999999999999999999999999999986
Q ss_pred ccCCCCcccccccCcccccccccccccCCC-CccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchh
Q 002063 829 AENSPKVSDYSCFAGTHGYIAPELAYTCKV-SEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLK 907 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
..... .....+||+.|||||++.+..+ +.++||||+||++|||++|+.||... +...............
T Consensus 162 ~~~~~---~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~-----~~~~~~~~i~~~~~~~-- 231 (275)
T 3hyh_A 162 MTDGN---FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE-----SIPVLFKNISNGVYTL-- 231 (275)
T ss_dssp ----------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHTCCCC--
T ss_pred cCCCC---ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCC-----CHHHHHHHHHcCCCCC--
Confidence 64332 2234679999999999998876 57999999999999999999999653 2222222222111111
Q ss_pred hccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 908 VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
+....+.+.+++.+||+.||++|||++|+++|-
T Consensus 232 ----------p~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp 264 (275)
T 3hyh_A 232 ----------PKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDD 264 (275)
T ss_dssp ----------CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHCH
T ss_pred ----------CCCCCHHHHHHHHHHccCChhHCcCHHHHHcCc
Confidence 112245678899999999999999999999863
No 27
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.2e-48 Score=436.47 Aligned_cols=249 Identities=24% Similarity=0.366 Sum_probs=209.2
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeec--cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEcc
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK--GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~--~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
..|++.++||+|+||+||+|+++.+|+.||||++.. ....+.+.+|++++++++|||||+++++|.+++..|+|||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 568999999999999999999999999999999865 344566889999999999999999999999999999999999
Q ss_pred CCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCC
Q 002063 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~ 833 (973)
+||+|.+++... .+++..+..++.||+.||+||| +++||||||||+|||++.+|.+||+|||+|+......
T Consensus 231 ~gG~L~~~i~~~------~l~e~~~~~~~~qil~aL~ylH---~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~ 301 (423)
T 4fie_A 231 EGGALTDIVTHT------RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV 301 (423)
T ss_dssp TTEEHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC
T ss_pred CCCcHHHHHhcc------CCCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEecCccceECCCCC
Confidence 999999999753 4889999999999999999999 7899999999999999999999999999998765432
Q ss_pred CcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccc
Q 002063 834 KVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEV 913 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (973)
. .....+||+.|||||++.+..|+.++||||+||++|||++|+.||... +............. +..
T Consensus 302 ~--~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~-----~~~~~~~~i~~~~~-------~~~ 367 (423)
T 4fie_A 302 P--RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE-----PPLKAMKMIRDNLP-------PRL 367 (423)
T ss_dssp C--CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS-----CHHHHHHHHHHSCC-------CCC
T ss_pred c--cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc-----CHHHHHHHHHcCCC-------CCC
Confidence 2 233467999999999999999999999999999999999999999653 11111111111111 000
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 914 ASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 914 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
.........+.+|+.+||+.||++|||+.|+++|
T Consensus 368 --~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 368 --KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp --SCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred --cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1112234568899999999999999999999986
No 28
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=2.7e-49 Score=435.97 Aligned_cols=262 Identities=27% Similarity=0.356 Sum_probs=211.9
Q ss_pred cCCcccCeecccCcEEEEEEEEcCC-----CceEEEEEeecc---ccHHHHHHHHHHHHhcCC-CceeeEeEEEEeC-Ce
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKN-----AGTVAVKQLWKG---DGVKVFAAEMEILGKIRH-RNILKLYACLLKG-GS 745 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~-----~~~vavK~~~~~---~~~~~~~~E~~~l~~l~h-pniv~l~~~~~~~-~~ 745 (973)
++|++.+.||+|+||+||+|++... ++.||||++... ...+.|.+|++++++++| ||||+++++|.++ +.
T Consensus 64 ~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~ 143 (353)
T 4ase_A 64 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 143 (353)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSC
T ss_pred HHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCE
Confidence 5789999999999999999998643 367999998763 345678999999999965 9999999998764 56
Q ss_pred eEEEEEccCCCchHHHHHhhhcC-----------CCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecC
Q 002063 746 SFLVLEYMPNGNLFQALHKRVKE-----------GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE 814 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~ 814 (973)
.|+|||||++|+|.++++..... ....+++..+..++.|||+||+||| +++||||||||+|||+++
T Consensus 144 ~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH---~~~iiHRDLK~~NILl~~ 220 (353)
T 4ase_A 144 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSE 220 (353)
T ss_dssp CEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECG
T ss_pred EEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh---hCCeecCccCccceeeCC
Confidence 89999999999999999864321 1345899999999999999999999 789999999999999999
Q ss_pred CCceEEecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHH
Q 002063 815 DYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVY 893 (973)
Q Consensus 815 ~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~ 893 (973)
++.+||+|||+|+...............||+.|||||++.+..|+.++|||||||++|||+| |+.||..... ...+..
T Consensus 221 ~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~-~~~~~~ 299 (353)
T 4ase_A 221 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI-DEEFCR 299 (353)
T ss_dssp GGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC-SHHHHH
T ss_pred CCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCH-HHHHHH
Confidence 99999999999987755444334445678999999999999999999999999999999998 9999975421 111222
Q ss_pred HHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002063 894 WVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
.+... . ....+....+++.+++.+||+.||++|||+.||+++|+++..
T Consensus 300 ~i~~g----~----------~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq 347 (353)
T 4ase_A 300 RLKEG----T----------RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 347 (353)
T ss_dssp HHHHT----C----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHcC----C----------CCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHH
Confidence 22111 0 011112234568899999999999999999999999988643
No 29
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.1e-48 Score=472.01 Aligned_cols=453 Identities=19% Similarity=0.268 Sum_probs=370.5
Q ss_pred CCCcEEeCCCCcccCccCccccCCCCCcEEEecCCcccCCCCCcC-----------CCCCCCEEeccCcccCCccccccc
Q 002063 97 QSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLS-----------ALKNLEIFDLSINYFTGRFPRWVV 165 (973)
Q Consensus 97 ~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~l~-----------~l~~L~~L~Ls~n~l~~~~~~~~~ 165 (973)
.+++.|+|++|+++|.+|.+|++|++|++|+|++|.+......++ .+.+|+ ++++.|.+.+..|..+.
T Consensus 81 ~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~-l~l~~~~l~~~~~~~~~ 159 (636)
T 4eco_A 81 GRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMR-MHYQKTFVDYDPREDFS 159 (636)
T ss_dssp CCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHH-THHHHHHTCCCGGGGSC
T ss_pred CCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHH-hhHHHhhhccCchhhHH
Confidence 478899999999999999999999999999999998732221111 145667 88888998888887776
Q ss_pred c-ccccceEEccCCcCCCCCCcccccCCCCCCEEEc--ccccCCCCCChhhhccCCCCeeeccccccccc----------
Q 002063 166 N-LTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFL--AHCNLRGRIPESISELRELGTLDICRNKISGE---------- 232 (973)
Q Consensus 166 ~-l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L--~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~---------- 232 (973)
. +..+..+++....+.. .....++.+.+ .+|++++ +|..++++++|++|+|++|++++.
T Consensus 160 ~~~~~l~~~~l~~~~~~~-------~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~ 231 (636)
T 4eco_A 160 DLIKDCINSDPQQKSIKK-------SSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENEN 231 (636)
T ss_dssp HHHHHHHHHCTTSCCCCC-------CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTT
T ss_pred HHHHHHhhcCcccccccc-------ccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccc
Confidence 4 3445555554433321 11122333333 3578888 888899999999999999999875
Q ss_pred -------cchhhh--ccccccEEEeecccCCCCCCccccccccccEEEeeccc-ccc-ccCCccCCC------CCccEEE
Q 002063 233 -------FPRSIR--KLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQ-MYG-KLPEEIGNL------KNLTVFQ 295 (973)
Q Consensus 233 -------~p~~l~--~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~-l~~-~~p~~~~~l------~~L~~L~ 295 (973)
+|..++ ++++|++|+|++|.+.+.+|..|+++++|++|+|++|+ +++ .+|..++++ ++|++|+
T Consensus 232 ~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~ 311 (636)
T 4eco_A 232 SEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIY 311 (636)
T ss_dssp SHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEE
T ss_pred cchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEE
Confidence 888888 99999999999999998999999999999999999998 888 888888776 8999999
Q ss_pred cccCCCCCCCCC--CcCCccccceeeccccccCCCCCccccccccccccccccccccccCChhhhhhhhHHHHHhhhccC
Q 002063 296 CFKNNFSGEFPS--GFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNF 373 (973)
Q Consensus 296 l~~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~nn~ 373 (973)
+++|+++ .+|. .++.+++|+.|++++|+++|.+| .++.+++|+.|+|++|+++ .
T Consensus 312 L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~--------------------- 367 (636)
T 4eco_A 312 IGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-E--------------------- 367 (636)
T ss_dssp CCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-E---------------------
T ss_pred CCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-c---------------------
Confidence 9999999 7888 89999999999999999998888 8999999999999999987 3
Q ss_pred CCCCCCcccCccc-cceEecccccccccCCccccCCC--CcceEeccCCcCCCCCCCccC-------CCCCCCEEEcccC
Q 002063 374 SGEVPNSYADCKT-IQRLRISDNHLSGKIPDGLWALP--NVGMLDFGDNDFTGGISPLIG-------LSTSLSQLVLQNN 443 (973)
Q Consensus 374 ~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~L~~N~l~~~~~~~~~-------~~~~L~~L~L~~N 443 (973)
+|..+..+++ |++|+|++|.++ .+|..+..+. +|+.|++++|++++..+..+. .+++|++|+|++|
T Consensus 368 ---lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N 443 (636)
T 4eco_A 368 ---IPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNN 443 (636)
T ss_dssp ---CCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSS
T ss_pred ---ccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCC
Confidence 4556777888 999999999998 7888887755 899999999999998888777 7789999999999
Q ss_pred CCCCCCChhhhcCCCCCEEecCCCcCCCCccc-ccccc-------ccCCEEEccCcccccCCCcccc--Cccccchhhcc
Q 002063 444 RFSGELPSELGRLTNLERLILTNNNFSGKIPS-ALGAL-------RQLSSLHLEENALTGSIPNEMG--DCARIVDLNLA 513 (973)
Q Consensus 444 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l-------~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls 513 (973)
++++..+..+..+++|+.|+|++|+++ .+|. .+... ++|+.|+|++|+++ .+|..+. .+++|+.|+|+
T Consensus 444 ~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls 521 (636)
T 4eco_A 444 QISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLS 521 (636)
T ss_dssp CCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECC
T ss_pred ccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECC
Confidence 999544445667999999999999999 5554 44433 39999999999999 6888886 99999999999
Q ss_pred ccccccCCCccccccCCCCeeec------CCCccCCCCCchhhccc-CceEEccCCccccccCcccccCCCCccccCCCC
Q 002063 514 RNSLSGNIPRSLSLLSSLNALNL------SGNKLTGSIPDNLMKLK-LSSIDLSENQLSGSVPLDFLRMGGDGAFAGNEG 586 (973)
Q Consensus 514 ~N~l~~~~p~~~~~l~~L~~L~L------~~N~l~~~~p~~~~~l~-L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~n~~ 586 (973)
+|+|++ +|..+..+++|+.|+| ++|++.+.+|..+..++ |+.|+|++|++ +.+|..+...-..-.+.+|+.
T Consensus 522 ~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~~~L~~L~Ls~N~l 599 (636)
T 4eco_A 522 YNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKITPNISVLDIKDNPN 599 (636)
T ss_dssp SSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCCTTCCEEECCSCTT
T ss_pred CCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHhCcCCEEECcCCCC
Confidence 999997 8999999999999999 57889999999999987 99999999999 788886543222346788887
Q ss_pred CccC
Q 002063 587 LCLD 590 (973)
Q Consensus 587 lc~~ 590 (973)
.|-.
T Consensus 600 ~~~~ 603 (636)
T 4eco_A 600 ISID 603 (636)
T ss_dssp CEEE
T ss_pred cccc
Confidence 7754
No 30
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=4.7e-47 Score=461.07 Aligned_cols=497 Identities=19% Similarity=0.191 Sum_probs=380.7
Q ss_pred CCCcccccCCCCCCC---CCCCcc----eeeeCCC---------CCceEEEeecCCCCCccccccccCCCCCcEEeCCCC
Q 002063 44 KDPHGVLDSWKESAD---SPCGFS----GITCDSV---------TGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFN 107 (973)
Q Consensus 44 ~d~~~~l~~W~~~~~---~~c~w~----gv~C~~~---------~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n 107 (973)
.|+...+++|+.+.+ ++|.|. .|.|... +..++.|||++|.|++..+.+|.++++|++|+|++|
T Consensus 7 ~~~~~~~~~~~~~~p~~~~~c~~~~~~~~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N 86 (635)
T 4g8a_A 7 KDDDDKLAAANSSIPESWEPCVEVVPNITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRC 86 (635)
T ss_dssp ------------------CCSEEEETTTEEECTTSCCSSCCSSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTC
T ss_pred CCCcchhhcccCCCCCCCCCccccCCCCEEECCCCCcCccCCCCCcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCC
Confidence 344445666654332 235442 4778632 247899999999999777788999999999999999
Q ss_pred cccCccCccccCCCCCcEEEecCCcccCCCCC-cCCCCCCCEEeccCcccCCccccccccccccceEEccCCcCCCCCCc
Q 002063 108 VLSGKLPLELSNCSNLKVLNVTGNAMVGSVPD-LSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIP 186 (973)
Q Consensus 108 ~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip 186 (973)
+|++..|.+|++|++|++|+|++|++++.++. |+++++|++|+|++|++++..+..|+++++|++|++++|.++...+|
T Consensus 87 ~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~ 166 (635)
T 4g8a_A 87 EIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLP 166 (635)
T ss_dssp CCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCC
T ss_pred cCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCc
Confidence 99987788899999999999999999988875 89999999999999999988888899999999999999999888888
Q ss_pred ccccCCCCCCEEEcccccCCCCCChhhhccCCCC----eeeccccccccccchhhhccccccEEEeecccCCC-------
Q 002063 187 ESIGNLKNLTYLFLAHCNLRGRIPESISELRELG----TLDICRNKISGEFPRSIRKLQKLWKIELYANNLTG------- 255 (973)
Q Consensus 187 ~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~----~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~------- 255 (973)
..++.+++|++|+|++|++++..+..+..+.+++ .++++.|.++...+.. .....++.+++.+|....
T Consensus 167 ~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~-~~~~~~~~l~l~~n~~~~~~~~~~~ 245 (635)
T 4g8a_A 167 EYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGA-FKEIRLHKLTLRNNFDSLNVMKTCI 245 (635)
T ss_dssp GGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTT-TTTCEEEEEEEESCCSSHHHHHHHH
T ss_pred hhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCccc-ccchhhhhhhhhcccccccccchhh
Confidence 9999999999999999999988888888776654 5778888887433332 233344455555443221
Q ss_pred ------------------------CCC---------------------------ccccccccccEEEeeccccccccCCc
Q 002063 256 ------------------------ELP---------------------------AELGNLTLLQEFDISSNQMYGKLPEE 284 (973)
Q Consensus 256 ------------------------~~~---------------------------~~l~~l~~L~~L~Ls~N~l~~~~p~~ 284 (973)
... ..+..+.+++.+++..|.+... ..
T Consensus 246 ~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~--~~ 323 (635)
T 4g8a_A 246 QGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERV--KD 323 (635)
T ss_dssp HTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEEC--GG
T ss_pred cCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhcccccccccccccccc--cc
Confidence 011 1122233444555555544322 22
Q ss_pred cCCCCCccEEEcccCCCCCCCCCCcCCccccceeeccccccCCCCCccccccccccccccccccccccCChhhhhhhhHH
Q 002063 285 IGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLL 364 (973)
Q Consensus 285 ~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll 364 (973)
+....+|+.|++.+|.+.+..+. .++.|+.+.+.+|.+.. +.....+++|+.|++++|.+...
T Consensus 324 ~~~~~~L~~L~l~~~~~~~~~~~---~l~~L~~l~l~~n~~~~--~~~~~~l~~L~~L~ls~n~l~~~------------ 386 (635)
T 4g8a_A 324 FSYNFGWQHLELVNCKFGQFPTL---KLKSLKRLTFTSNKGGN--AFSEVDLPSLEFLDLSRNGLSFK------------ 386 (635)
T ss_dssp GGSCCCCSEEEEESCEESSCCCC---BCTTCCEEEEESCCSCC--BCCCCBCTTCCEEECCSSCCBEE------------
T ss_pred cccchhhhhhhcccccccCcCcc---cchhhhhcccccccCCC--Ccccccccccccchhhccccccc------------
Confidence 34455666677777666644332 34556666666666653 22344677788888888877522
Q ss_pred HHHhhhccCCCCCCCcccCccccceEecccccccccCCccccCCCCcceEeccCCcCCCCCC-CccCCCCCCCEEEcccC
Q 002063 365 NLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGIS-PLIGLSTSLSQLVLQNN 443 (973)
Q Consensus 365 ~ll~l~nn~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~~~~L~~L~L~~N 443 (973)
+..+..+..+.+|++|+++.|.+. ..+..+..+++|+.++++.|+.....+ ..+..+++++.++++.|
T Consensus 387 ----------~~~~~~~~~~~~L~~L~~~~~~~~-~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n 455 (635)
T 4g8a_A 387 ----------GCCSQSDFGTISLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHT 455 (635)
T ss_dssp ----------EECCHHHHSCSCCCEEECCSCSEE-EECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTS
T ss_pred ----------cccccchhhhhhhhhhhccccccc-cccccccccccccchhhhhcccccccccccccccccccccccccc
Confidence 123344556788999999999988 456678899999999999888766544 56788999999999999
Q ss_pred CCCCCCChhhhcCCCCCEEecCCCcCC-CCccccccccccCCEEEccCcccccCCCccccCccccchhhccccccccCCC
Q 002063 444 RFSGELPSELGRLTNLERLILTNNNFS-GKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIP 522 (973)
Q Consensus 444 ~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 522 (973)
.+.+..+..+..+++|+.|+|++|++. +..|..|..+++|++|+|++|+|++.+|..|+++++|+.|+|++|+|++..|
T Consensus 456 ~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~ 535 (635)
T 4g8a_A 456 HTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDT 535 (635)
T ss_dssp CCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCC
T ss_pred ccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCCh
Confidence 999999999999999999999999854 4678899999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCeeecCCCccCCCCCchhhcc-c-CceEEccCCccccccCcc
Q 002063 523 RSLSLLSSLNALNLSGNKLTGSIPDNLMKL-K-LSSIDLSENQLSGSVPLD 571 (973)
Q Consensus 523 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l-~-L~~l~ls~N~l~~~~p~~ 571 (973)
..|..+++|++|+|++|+|++.+|..+..+ + |+.|+|++|+|+|+|...
T Consensus 536 ~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~~~ 586 (635)
T 4g8a_A 536 FPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQ 586 (635)
T ss_dssp GGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGGGH
T ss_pred hHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCCcH
Confidence 999999999999999999999999999887 3 999999999999999864
No 31
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2.9e-47 Score=465.84 Aligned_cols=440 Identities=19% Similarity=0.279 Sum_probs=364.8
Q ss_pred CCCcEEeCCCCcccCccCccccCCCCCcEEEe-cCCcccCCCCC-cCCC-CCCCE-----E---------ec-cCcccCC
Q 002063 97 QSLTVLSLPFNVLSGKLPLELSNCSNLKVLNV-TGNAMVGSVPD-LSAL-KNLEI-----F---------DL-SINYFTG 158 (973)
Q Consensus 97 ~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L-~~n~l~~~~~~-l~~l-~~L~~-----L---------~L-s~n~l~~ 158 (973)
.+++.|+|++|+++|.+|.+|++|++|++|+| ++|.+.|..+. .... ..+.. + +. ....+.+
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 57899999999999999999999999999999 99988876331 1100 00000 0 00 0001111
Q ss_pred cc-----------ccccccccccceEEccC--CcCCCCCCcccccCCCCCCEEEcccccCCC-----------------C
Q 002063 159 RF-----------PRWVVNLTQLVSLSIGD--NVYDEAEIPESIGNLKNLTYLFLAHCNLRG-----------------R 208 (973)
Q Consensus 159 ~~-----------~~~~~~l~~L~~L~l~~--n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~-----------------~ 208 (973)
.. +........++.+.++. |.++. +|..++++++|++|+|++|++++ .
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~--IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~ 480 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF--ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQY 480 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE--ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHH
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc--hhHHHhcCCCCCEEECcCCcCCCCccccccccccccccccc
Confidence 11 11112233444555544 67764 89999999999999999999998 3
Q ss_pred CChhhh--ccCCCCeeeccccccccccchhhhccccccEEEeeccc-CCC-CCCccccccc-------cccEEEeecccc
Q 002063 209 IPESIS--ELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANN-LTG-ELPAELGNLT-------LLQEFDISSNQM 277 (973)
Q Consensus 209 ~p~~l~--~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~-l~~-~~~~~l~~l~-------~L~~L~Ls~N~l 277 (973)
+|..++ ++++|++|+|++|++.+.+|..|+++++|++|+|++|+ +++ .+|..+++++ +|++|+|++|++
T Consensus 481 iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L 560 (876)
T 4ecn_A 481 ENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNL 560 (876)
T ss_dssp TTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCC
T ss_pred CChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcC
Confidence 888887 99999999999999999999999999999999999998 998 7888777776 999999999999
Q ss_pred ccccCC--ccCCCCCccEEEcccCCCCCCCCCCcCCccccceeeccccccCCCCCcccccccc-ccccccccccccccCC
Q 002063 278 YGKLPE--EIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTA-LTDVDISENQFSGSFP 354 (973)
Q Consensus 278 ~~~~p~--~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~-L~~L~Ls~N~l~~~~p 354 (973)
+ .+|. .++++++|+.|++++|+++ .+| .|+.+++|+.|++++|+++ .+|..+..+++ |+.|+|++|+++ .+|
T Consensus 561 ~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp 635 (876)
T 4ecn_A 561 E-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIP 635 (876)
T ss_dssp C-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCC
T ss_pred C-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCc
Confidence 9 8998 8999999999999999999 788 8999999999999999999 89999999999 999999999998 444
Q ss_pred hhhhhhhhHHHHHhhhccCCCCCCCcccCc--cccceEecccccccccCCccc---c--CCCCcceEeccCCcCCCCCCC
Q 002063 355 KYLCEKRKLLNLLALSNNFSGEVPNSYADC--KTIQRLRISDNHLSGKIPDGL---W--ALPNVGMLDFGDNDFTGGISP 427 (973)
Q Consensus 355 ~~~~~~~~ll~ll~l~nn~~~~~p~~~~~l--~~L~~L~Ls~N~l~~~~p~~~---~--~l~~L~~L~L~~N~l~~~~~~ 427 (973)
..+..+ ++|+.|+|++|++.+.+|... . .+++|+.|+|++|+++..+..
T Consensus 636 ------------------------~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~ 691 (876)
T 4ecn_A 636 ------------------------NIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTE 691 (876)
T ss_dssp ------------------------SCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHH
T ss_pred ------------------------hhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHH
Confidence 444444 459999999999998776433 2 345899999999999977666
Q ss_pred ccCCCCCCCEEEcccCCCCCCCChhhhcC--------CCCCEEecCCCcCCCCcccccc--ccccCCEEEccCcccccCC
Q 002063 428 LIGLSTSLSQLVLQNNRFSGELPSELGRL--------TNLERLILTNNNFSGKIPSALG--ALRQLSSLHLEENALTGSI 497 (973)
Q Consensus 428 ~~~~~~~L~~L~L~~N~l~~~~p~~~~~l--------~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~ 497 (973)
.+..+++|+.|+|++|+|+ .+|..+... ++|+.|+|++|+++ .+|..+. .+++|+.|+|++|+|++ +
T Consensus 692 ~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-l 768 (876)
T 4ecn_A 692 LFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-F 768 (876)
T ss_dssp HHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-C
T ss_pred HHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-c
Confidence 6778999999999999999 666655443 38999999999999 7888887 99999999999999997 7
Q ss_pred CccccCccccchhhccc------cccccCCCccccccCCCCeeecCCCccCCCCCchhhcccCceEEccCCccccccCcc
Q 002063 498 PNEMGDCARIVDLNLAR------NSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLKLSSIDLSENQLSGSVPLD 571 (973)
Q Consensus 498 p~~~~~l~~L~~L~Ls~------N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~L~~l~ls~N~l~~~~p~~ 571 (973)
|..+..+++|+.|+|++ |++.+.+|..|..+++|+.|+|++|+| +.+|..+.. .|+.|||++|++...-+..
T Consensus 769 p~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~~-~L~~LdLs~N~l~~i~~~~ 846 (876)
T 4ecn_A 769 PTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLTP-QLYILDIADNPNISIDVTS 846 (876)
T ss_dssp CCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCCS-SSCEEECCSCTTCEEECGG
T ss_pred chhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhcC-CCCEEECCCCCCCccChHH
Confidence 99999999999999976 889999999999999999999999999 689988653 6999999999998655444
Q ss_pred c
Q 002063 572 F 572 (973)
Q Consensus 572 ~ 572 (973)
+
T Consensus 847 ~ 847 (876)
T 4ecn_A 847 V 847 (876)
T ss_dssp G
T ss_pred c
Confidence 3
No 32
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=4e-48 Score=420.70 Aligned_cols=265 Identities=25% Similarity=0.312 Sum_probs=200.4
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccccHH-HHHHHHHHHHhcCCCceeeEeEEEEeCC----eeEEEEE
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVK-VFAAEMEILGKIRHRNILKLYACLLKGG----SSFLVLE 751 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~-~~~~E~~~l~~l~hpniv~l~~~~~~~~----~~~lv~e 751 (973)
+|.+.++||+|+||+||+|++. |+.||||++....... .+.+|+..+.+++|||||++++++.+++ ..|+|||
T Consensus 4 ~i~L~~~iG~G~fG~Vy~~~~~--g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~E 81 (303)
T 3hmm_A 4 TIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD 81 (303)
T ss_dssp GEEEEEEEEECSSSEEEEEEET--TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred EEEEEEEEeeCCCeEEEEEEEC--CEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEec
Confidence 5678899999999999999985 8899999987644322 2334566667889999999999997653 5799999
Q ss_pred ccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcC-----CCCeEecCCCCCCeeecCCCceEEecccCC
Q 002063 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDC-----SPPIIHRDIKSSNILLDEDYEPKIADFGVA 826 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~-----~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~ 826 (973)
||++|+|.++++.. .++|..+.+++.|+|+||+|||+.+ .++||||||||+|||++.++.+||+|||+|
T Consensus 82 y~~~gsL~~~l~~~------~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla 155 (303)
T 3hmm_A 82 YHEHGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp CCTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred CCCCCcHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCC
Confidence 99999999999853 4899999999999999999999431 238999999999999999999999999999
Q ss_pred ccccCCCCcc--cccccCcccccccccccccC------CCCccchHHHHHHHHHHHHhCCCCCCcccC----------CC
Q 002063 827 KIAENSPKVS--DYSCFAGTHGYIAPELAYTC------KVSEKSDVFSFGVVLLELVTGRKPVEEEYG----------DG 888 (973)
Q Consensus 827 ~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwslG~~l~ell~g~~pf~~~~~----------~~ 888 (973)
+......... .....+||+.|||||++.+. .++.++|||||||++|||+||..||..... ..
T Consensus 156 ~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~ 235 (303)
T 3hmm_A 156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 235 (303)
T ss_dssp EEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSS
T ss_pred ccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhccccc
Confidence 8775543322 22345799999999998754 467899999999999999999887753311 11
Q ss_pred ccHHHHHHHhhcccccchhhccccccCh-hhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002063 889 KDIVYWVSTHLNNHENVLKVLDCEVASE-SIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 889 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
............. ..++..... ...+....+.+++.+||+.||++||||.||+++|+++..
T Consensus 236 ~~~~~~~~~~~~~------~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~ 297 (303)
T 3hmm_A 236 PSVEEMRKVVCEQ------KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp CCHHHHHHHHTTS------CCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred chHHHHHHHHhcc------cCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence 1122222211111 111111111 123456678899999999999999999999999988653
No 33
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=3.4e-48 Score=416.28 Aligned_cols=247 Identities=27% Similarity=0.343 Sum_probs=197.9
Q ss_pred cCCcccCeecccCcEEEEEEEEc---CCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLK---KNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~---~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
++|++.+.||+|+||+||+|++. .+++.||||++.+. ....++.+|++++++++|||||++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 57999999999999999999974 45789999998652 234468899999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcc
Q 002063 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||++||+|.+++.+. ..+++..+..++.|++.||+||| +++|+||||||+|||++.+|.+||+|||+|+.
T Consensus 104 vmEy~~gg~L~~~l~~~-----~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~ 175 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKE-----VMFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKE 175 (304)
T ss_dssp EECCCTTCEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTSCEEEESSEEEEC
T ss_pred EEEcCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHeEEcCCCCEEeccccccee
Confidence 99999999999999864 35889999999999999999999 78999999999999999999999999999986
Q ss_pred ccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhh
Q 002063 829 AENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKV 908 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (973)
...... .....+||+.|||||++.+..|+.++||||+||++|||++|+.||... +...............
T Consensus 176 ~~~~~~--~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~-----~~~~~~~~i~~~~~~~--- 245 (304)
T 3ubd_A 176 SIDHEK--KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGK-----DRKETMTMILKAKLGM--- 245 (304)
T ss_dssp -----C--CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHCCCCC---
T ss_pred ccCCCc--cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCc-----CHHHHHHHHHcCCCCC---
Confidence 543221 223467999999999999999999999999999999999999999753 2222222222211111
Q ss_pred ccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCH-----HHHHHH
Q 002063 909 LDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPM-----REVVKM 949 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~-----~evl~~ 949 (973)
+....+++.+++.+||+.||++|||+ +|+++|
T Consensus 246 ---------p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~H 282 (304)
T 3ubd_A 246 ---------PQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRH 282 (304)
T ss_dssp ---------CTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTS
T ss_pred ---------CCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcC
Confidence 11234567899999999999999984 688765
No 34
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=2.2e-47 Score=455.38 Aligned_cols=474 Identities=18% Similarity=0.174 Sum_probs=378.0
Q ss_pred CCCcceeeeCC--CCCceEEEeecCCCCCccccccccCCCCCcEEeCCCCcccCccCccccCCCCCcEEEecCCcccCCC
Q 002063 60 PCGFSGITCDS--VTGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSV 137 (973)
Q Consensus 60 ~c~w~gv~C~~--~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~ 137 (973)
.|++.+++.-+ ...+++.|+|+++++++..|..++.+++|++|+|++|++++..|..|+++++|++|+|++|++.+.+
T Consensus 11 ~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 90 (549)
T 2z81_A 11 DGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLS 90 (549)
T ss_dssp ECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCC
T ss_pred ECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccC
Confidence 36777776532 3368999999999999988999999999999999999999888899999999999999999999998
Q ss_pred CC-cCCCCCCCEEeccCcccCC-ccccccccccccceEEccCCcCCCCCCc-ccccCCCCCCEEEcccccCCCCCChhhh
Q 002063 138 PD-LSALKNLEIFDLSINYFTG-RFPRWVVNLTQLVSLSIGDNVYDEAEIP-ESIGNLKNLTYLFLAHCNLRGRIPESIS 214 (973)
Q Consensus 138 ~~-l~~l~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~ip-~~~~~l~~L~~L~L~~n~l~~~~p~~l~ 214 (973)
+. ++++++|++|+|++|.+++ ..|..+.++++|++|++++|.+.. .+| ..++++++|++|++++|++++.+|..++
T Consensus 91 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~ 169 (549)
T 2z81_A 91 SSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFS-EIRRIDFAGLTSLNELEIKALSLRNYQSQSLK 169 (549)
T ss_dssp HHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCC-EECTTTTTTCCEEEEEEEEETTCCEECTTTTT
T ss_pred HHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCcccc-ccCHhhhhcccccCeeeccCCcccccChhhhh
Confidence 86 9999999999999999987 467899999999999999998432 344 5789999999999999999999999999
Q ss_pred ccCCCCeeeccccccccccchh-hhccccccEEEeecccCCCCC--C-ccccccccccEEEeeccccccccCC----ccC
Q 002063 215 ELRELGTLDICRNKISGEFPRS-IRKLQKLWKIELYANNLTGEL--P-AELGNLTLLQEFDISSNQMYGKLPE----EIG 286 (973)
Q Consensus 215 ~l~~L~~L~L~~n~l~~~~p~~-l~~l~~L~~L~L~~n~l~~~~--~-~~l~~l~~L~~L~Ls~N~l~~~~p~----~~~ 286 (973)
.+++|++|+++.|.+. .+|.. +..+++|++|++++|++++.. | .....+++|+.|++++|.+.+..+. .+.
T Consensus 170 ~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~ 248 (549)
T 2z81_A 170 SIRDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLR 248 (549)
T ss_dssp TCSEEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGG
T ss_pred ccccCceEecccCccc-ccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhh
Confidence 9999999999999987 45554 466999999999999999642 2 2234578899999999988765443 345
Q ss_pred CCCCccEEEcccCCCCCCC------CCCcCCccccceeeccccccCCC-----CCccccccccccccccccccccccCCh
Q 002063 287 NLKNLTVFQCFKNNFSGEF------PSGFGDMRKLFAFSIYGNRFSGP-----FPENLGRYTALTDVDISENQFSGSFPK 355 (973)
Q Consensus 287 ~l~~L~~L~l~~N~l~~~~------p~~~~~l~~L~~L~l~~N~l~~~-----~~~~l~~l~~L~~L~Ls~N~l~~~~p~ 355 (973)
.+++|+.+++++|.+.+.. ...+..+++|+.|.+.++.+... ++..+....+|+.|++++|.++ .+|.
T Consensus 249 ~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~ 327 (549)
T 2z81_A 249 YILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPC 327 (549)
T ss_dssp GCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-CCCH
T ss_pred hhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccc-cCCH
Confidence 6778888888888876531 12345556666666666654421 1112233455666666666665 5555
Q ss_pred hhhh-hhhHHHHHhhhccCCCCCC---CcccCccccceEecccccccccCC--ccccCCCCcceEeccCCcCCCCCCCcc
Q 002063 356 YLCE-KRKLLNLLALSNNFSGEVP---NSYADCKTIQRLRISDNHLSGKIP--DGLWALPNVGMLDFGDNDFTGGISPLI 429 (973)
Q Consensus 356 ~~~~-~~~ll~ll~l~nn~~~~~p---~~~~~l~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~L~~N~l~~~~~~~~ 429 (973)
.++. +.++..+....|++.+.+| ..++.+++|++|+|++|++++..+ ..+..+++|+.|++++|++++ ++..+
T Consensus 328 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~~ 406 (549)
T 2z81_A 328 SFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFHP-MPDSC 406 (549)
T ss_dssp HHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCCC-CCSCC
T ss_pred HHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCcc-CChhh
Confidence 5532 3332222222344444442 347788999999999999986543 568899999999999999995 55677
Q ss_pred CCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEecCCCcCCCCccccccccccCCEEEccCcccccCCCccccCccccch
Q 002063 430 GLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVD 509 (973)
Q Consensus 430 ~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 509 (973)
..+++|++|+|++|+++ .+|..+ .++|++|+|++|++++.+ ..+++|++|+|++|+|+ .+|. ...+++|+.
T Consensus 407 ~~~~~L~~L~Ls~N~l~-~l~~~~--~~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~ 477 (549)
T 2z81_A 407 QWPEKMRFLNLSSTGIR-VVKTCI--PQTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLV 477 (549)
T ss_dssp CCCTTCCEEECTTSCCS-CCCTTS--CTTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCE
T ss_pred cccccccEEECCCCCcc-cccchh--cCCceEEECCCCChhhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCE
Confidence 88999999999999998 455443 368999999999999653 57899999999999999 5665 467999999
Q ss_pred hhccccccccCCCccccccCCCCeeecCCCccCCCCC
Q 002063 510 LNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIP 546 (973)
Q Consensus 510 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 546 (973)
|+|++|+|++.+|..|..+++|+.|+|++|++++..|
T Consensus 478 L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 478 MKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp EECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred EecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 9999999999999999999999999999999998877
No 35
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=2.3e-47 Score=412.27 Aligned_cols=252 Identities=22% Similarity=0.329 Sum_probs=192.6
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCC-------
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGG------- 744 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~------- 744 (973)
..+|++.+.||+|+||+||+|+++.+++.||||++... ...+.+.+|++++++++|||||+++++|.+.+
T Consensus 4 l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~ 83 (299)
T 4g31_A 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP 83 (299)
T ss_dssp HHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred chhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence 45789999999999999999999999999999998653 23467889999999999999999999987543
Q ss_pred -----eeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceE
Q 002063 745 -----SSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPK 819 (973)
Q Consensus 745 -----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~k 819 (973)
..|+||||+++|+|.+++... ......++..+..++.|+++||+||| +++||||||||+|||++.++.+|
T Consensus 84 ~~~~~~l~ivmE~~~gg~L~~~l~~~--~~~~~~~~~~~~~i~~qi~~al~ylH---~~~IiHRDlKp~NILl~~~~~vK 158 (299)
T 4g31_A 84 SSPKVYLYIQMQLCRKENLKDWMNGR--CTIEERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVK 158 (299)
T ss_dssp ---CEEEEEEEECCCSCCHHHHHHTC--CSGGGSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEE
T ss_pred cCCCcEEEEEEecCCCCcHHHHHHhc--CCCChhHHHHHHHHHHHHHHHHHHHH---HCcCccccCcHHHeEECCCCcEE
Confidence 369999999999999999854 22234567778899999999999999 78999999999999999999999
Q ss_pred EecccCCccccCCCCc----------ccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCc
Q 002063 820 IADFGVAKIAENSPKV----------SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGK 889 (973)
Q Consensus 820 l~Dfgl~~~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~ 889 (973)
|+|||+|+........ ...+..+||+.|||||++.+..|+.++||||+||++|||++ ||....
T Consensus 159 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~---- 231 (299)
T 4g31_A 159 VGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM---- 231 (299)
T ss_dssp ECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH----
T ss_pred EccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc----
Confidence 9999999876543221 11233579999999999999999999999999999999996 775421
Q ss_pred cHHHHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 890 DIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 890 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
+........ ..... +....+..+.+.+++.+||+.||++|||+.|++++
T Consensus 232 ~~~~~~~~~----------~~~~~-p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 232 ERVRTLTDV----------RNLKF-PPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp HHHHHHHHH----------HTTCC-CHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHHH----------hcCCC-CCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 111111111 01111 12233444566789999999999999999999985
No 36
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.2e-46 Score=443.34 Aligned_cols=454 Identities=20% Similarity=0.217 Sum_probs=380.1
Q ss_pred cEEeCCCCcccCccCccccCCCCCcEEEecCCcccCCCC-CcCCCCCCCEEeccCcccCCccccccccccccceEEccCC
Q 002063 100 TVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVP-DLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDN 178 (973)
Q Consensus 100 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n 178 (973)
++|++++|+++ .+|..+. ++|++|+|++|.+.+.++ .|.++++|++|+|++|++++..|..|.++++|++|++++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 57999999999 6888777 899999999999999886 5999999999999999999888999999999999999999
Q ss_pred cCCCCCCcccccCCCCCCEEEcccccCCC-CCChhhhccCCCCeeeccccccccccchhhhccccc--cEEEeecccC--
Q 002063 179 VYDEAEIPESIGNLKNLTYLFLAHCNLRG-RIPESISELRELGTLDICRNKISGEFPRSIRKLQKL--WKIELYANNL-- 253 (973)
Q Consensus 179 ~l~~~~ip~~~~~l~~L~~L~L~~n~l~~-~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L--~~L~L~~n~l-- 253 (973)
.++ .+|.. .+++|++|+|++|++++ .+|..++.+++|++|++++|++++ ..+..+++| ++|++++|.+
T Consensus 80 ~l~--~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~ 152 (520)
T 2z7x_B 80 KLV--KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYG 152 (520)
T ss_dssp CCC--EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTT
T ss_pred cee--ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccc
Confidence 997 57776 89999999999999997 478999999999999999999986 457778888 9999999999
Q ss_pred CCCCCccccccc-cccEEEeeccccccccCC-ccCCCCCccEEEcccCC-------CCCCCCCCcCCccccceeeccccc
Q 002063 254 TGELPAELGNLT-LLQEFDISSNQMYGKLPE-EIGNLKNLTVFQCFKNN-------FSGEFPSGFGDMRKLFAFSIYGNR 324 (973)
Q Consensus 254 ~~~~~~~l~~l~-~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~l~~N~-------l~~~~p~~~~~l~~L~~L~l~~N~ 324 (973)
++..|..+..+. +...+++++|.+.+.++. .+.++++|+.|++++|. +.+.+| .++.+++|+.|++++|.
T Consensus 153 ~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~ 231 (520)
T 2z7x_B 153 EKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIE 231 (520)
T ss_dssp SSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEE
T ss_pred cccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhccccccc
Confidence 778888888766 455678888988776665 46789999999999987 666665 68889999999999988
Q ss_pred cCCCCCcccc---ccccccccccccccccccCChhhhhhhhHHHHHhhhccCCCCCCCcccCccccceEecccccccccC
Q 002063 325 FSGPFPENLG---RYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKI 401 (973)
Q Consensus 325 l~~~~~~~l~---~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 401 (973)
+++..+..+. ..++|++|++++|+++|.+|..++. ...+.+++|+.+++++|.+ .+
T Consensus 232 l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~-------------------~~~~~l~~L~~l~l~~n~~--~~ 290 (520)
T 2z7x_B 232 TTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFD-------------------YSGTSLKALSIHQVVSDVF--GF 290 (520)
T ss_dssp EEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCC-------------------CCSCCCCEEEEEEEEECCC--CS
T ss_pred cCHHHHHHHHHHhhhCcccEEEeecccccCccccchhh-------------------cccccCceeEeccccccce--ec
Confidence 8754333222 1358999999999998766653311 1127889999999999999 45
Q ss_pred C-ccccCC---CCcceEeccCCcCCCCCCCccCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEecCCCcCCC--Cccc
Q 002063 402 P-DGLWAL---PNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSG--KIPS 475 (973)
Q Consensus 402 p-~~~~~l---~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~ 475 (973)
| ..++.+ .+|+.|++++|.+..... +..+++|++|++++|++++..|..++.+++|++|+|++|++++ .+|.
T Consensus 291 p~~~~~~~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~ 368 (520)
T 2z7x_B 291 PQSYIYEIFSNMNIKNFTVSGTRMVHMLC--PSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAE 368 (520)
T ss_dssp CTHHHHHHHHTCCCSEEEEESSCCCCCCC--CSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHH
T ss_pred chhhhhcccccCceeEEEcCCCccccccc--hhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchH
Confidence 5 555555 789999999999876542 2678999999999999999899999999999999999999996 5668
Q ss_pred cccccccCCEEEccCcccccCCCc-cccCccccchhhccccccccCCCccccccCCCCeeecCCCccCCCCCchhhccc-
Q 002063 476 ALGALRQLSSLHLEENALTGSIPN-EMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLK- 553 (973)
Q Consensus 476 ~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~- 553 (973)
.+..+++|++|+|++|++++.+|. .+..+++|+.|++++|++++.+|..+. ++|+.|+|++|+++ .+|..+..++
T Consensus 369 ~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~ 445 (520)
T 2z7x_B 369 MTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEA 445 (520)
T ss_dssp HHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTT
T ss_pred HHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCC
Confidence 899999999999999999985565 488999999999999999988887665 79999999999999 8888887876
Q ss_pred CceEEccCCccccccCcc-cccCCCC--ccccCCCCCccCc
Q 002063 554 LSSIDLSENQLSGSVPLD-FLRMGGD--GAFAGNEGLCLDQ 591 (973)
Q Consensus 554 L~~l~ls~N~l~~~~p~~-~~~~~~~--~~~~~n~~lc~~~ 591 (973)
|+.|++++|+++ .+|.. +..+..- -.+.+|+..|..+
T Consensus 446 L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 446 LQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp CCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCEEECCCCcCC-ccCHHHhccCCcccEEECcCCCCcccCC
Confidence 999999999999 56664 5444331 3568888777543
No 37
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1.2e-45 Score=440.58 Aligned_cols=457 Identities=21% Similarity=0.235 Sum_probs=383.1
Q ss_pred EEEeecCCCCCccccccccCCCCCcEEeCCCCcccCccCccccCCCCCcEEEecCCcccCCCC-CcCCCCCCCEEeccCc
Q 002063 76 TEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVP-DLSALKNLEIFDLSIN 154 (973)
Q Consensus 76 ~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~-~l~~l~~L~~L~Ls~n 154 (973)
..++++++++++ +|..+. ++|++|+|++|.+++..|..|+++++|++|+|++|++++.++ .|+++++|++|||++|
T Consensus 34 ~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 110 (562)
T 3a79_B 34 SMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHN 110 (562)
T ss_dssp CEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTS
T ss_pred cEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCC
Confidence 789999999995 887665 899999999999998888899999999999999999999866 5999999999999999
Q ss_pred ccCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccccCCCCCChhhhccCCC--Ceeecccccc--c
Q 002063 155 YFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELREL--GTLDICRNKI--S 230 (973)
Q Consensus 155 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L--~~L~L~~n~l--~ 230 (973)
.++ .+|.. .+++|++|++++|.++...+|..++++++|++|++++|++++. .+..+++| ++|++++|++ +
T Consensus 111 ~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~ 184 (562)
T 3a79_B 111 RLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIK 184 (562)
T ss_dssp CCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCC
T ss_pred cCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeeccccccc
Confidence 999 56666 8999999999999998777789999999999999999999863 45566666 9999999999 8
Q ss_pred cccchhhhccc-cccEEEeecccCCCCCCc-cccccccccEEEeeccc-----cccccCCccCCCCCccEEEcccCCCCC
Q 002063 231 GEFPRSIRKLQ-KLWKIELYANNLTGELPA-ELGNLTLLQEFDISSNQ-----MYGKLPEEIGNLKNLTVFQCFKNNFSG 303 (973)
Q Consensus 231 ~~~p~~l~~l~-~L~~L~L~~n~l~~~~~~-~l~~l~~L~~L~Ls~N~-----l~~~~p~~~~~l~~L~~L~l~~N~l~~ 303 (973)
+..|..+..+. ..-.++++.|.+.+.++. .+..+++|+.|++++|+ +.+ .+..+..+++|+.+++.++.+.+
T Consensus 185 ~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~-~~~~l~~l~~L~~L~L~~~~l~~ 263 (562)
T 3a79_B 185 GGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMT-FLSELTRGPTLLNVTLQHIETTW 263 (562)
T ss_dssp SSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHH-HHHHHHSCSSCEEEEEEEEEECH
T ss_pred ccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHH-HHHHHhccCcceEEEecCCcCcH
Confidence 88888888765 222668899998876664 46789999999999995 232 23457778899999998888765
Q ss_pred CCCCC---cCCccccceeeccccccCCCCCccc-----cccccccccccccccccccCCh-hhhhhhhHHHHHhhhccCC
Q 002063 304 EFPSG---FGDMRKLFAFSIYGNRFSGPFPENL-----GRYTALTDVDISENQFSGSFPK-YLCEKRKLLNLLALSNNFS 374 (973)
Q Consensus 304 ~~p~~---~~~l~~L~~L~l~~N~l~~~~~~~l-----~~l~~L~~L~Ls~N~l~~~~p~-~~~~~~~ll~ll~l~nn~~ 374 (973)
..... ....++|++|++++|.+++.+|..+ ..++.|+.++++.|.+ .+|. .+....
T Consensus 264 ~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~------------- 328 (562)
T 3a79_B 264 KCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--LFSKEALYSVF------------- 328 (562)
T ss_dssp HHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHHH-------------
T ss_pred HHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhccccee--ecChhhhhhhh-------------
Confidence 21111 1123489999999999999999888 7888888888888887 5563 222211
Q ss_pred CCCCCcccCccccceEecccccccccCCccccCCCCcceEeccCCcCCCCCCCccCCCCCCCEEEcccCCCCCC--CChh
Q 002063 375 GEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGE--LPSE 452 (973)
Q Consensus 375 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~--~p~~ 452 (973)
...+|++|++++|.+.... ....+++|++|++++|++++..+..++.+++|++|+|++|++++. +|..
T Consensus 329 --------~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 398 (562)
T 3a79_B 329 --------AEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALM 398 (562)
T ss_dssp --------HTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHT
T ss_pred --------ccCcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhh
Confidence 1257999999999986322 126789999999999999998999999999999999999999963 3467
Q ss_pred hhcCCCCCEEecCCCcCCCCcc-ccccccccCCEEEccCcccccCCCccccCccccchhhccccccccCCCccccccCCC
Q 002063 453 LGRLTNLERLILTNNNFSGKIP-SALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSL 531 (973)
Q Consensus 453 ~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 531 (973)
+..+++|++|+|++|++++.+| ..+..+++|++|+|++|++++.+|..+. ++|+.|+|++|+|+ .+|..+..+++|
T Consensus 399 ~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L 475 (562)
T 3a79_B 399 TKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQAL 475 (562)
T ss_dssp TTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCC
T ss_pred hcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCC
Confidence 8999999999999999998455 4688999999999999999987777665 78999999999999 677777799999
Q ss_pred CeeecCCCccCCCCCch-hhccc-CceEEccCCccccccCcc
Q 002063 532 NALNLSGNKLTGSIPDN-LMKLK-LSSIDLSENQLSGSVPLD 571 (973)
Q Consensus 532 ~~L~L~~N~l~~~~p~~-~~~l~-L~~l~ls~N~l~~~~p~~ 571 (973)
+.|+|++|+|+ .+|.. +..++ |+.|++++|+|+|.||..
T Consensus 476 ~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~~~ 516 (562)
T 3a79_B 476 QELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTCPGI 516 (562)
T ss_dssp SEEECCSSCCC-CCCTTSTTTCTTCCCEECCSCCBCCCHHHH
T ss_pred CEEECCCCCCC-CCCHHHHhcCCCCCEEEecCCCcCCCcchH
Confidence 99999999999 56665 77776 999999999999999974
No 38
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1.6e-44 Score=401.08 Aligned_cols=199 Identities=25% Similarity=0.407 Sum_probs=173.1
Q ss_pred hcCCcccCeecccCcEEEEEEEEc---CCCceEEEEEeeccccHHHHHHHHHHHHhc-CCCceeeEeEEEEeCCeeEEEE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLK---KNAGTVAVKQLWKGDGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~---~~~~~vavK~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~ 750 (973)
.++|++.+.||+|+||+||+|+++ .+++.||||++.+.....++.+|+++++.+ +||||++++++|.++++.|+||
T Consensus 20 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvm 99 (361)
T 4f9c_A 20 SNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAM 99 (361)
T ss_dssp GGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEE
T ss_pred cCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEE
Confidence 467999999999999999999875 457889999998877777889999999998 6999999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCC-CceEEecccCCccc
Q 002063 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDED-YEPKIADFGVAKIA 829 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~-~~~kl~Dfgl~~~~ 829 (973)
||+++|+|.+++. .+++..+..++.|++.||+||| +++|+||||||+|||++.+ +.+||+|||+|+..
T Consensus 100 E~~~g~~L~~~~~--------~l~~~~~~~~~~qll~al~ylH---~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~ 168 (361)
T 4f9c_A 100 PYLEHESFLDILN--------SLSFQEVREYMLNLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGT 168 (361)
T ss_dssp ECCCCCCHHHHHT--------TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred eCCCcccHHHHHc--------CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCcCCHHHeEEeCCCCeEEECcCCCCccc
Confidence 9999999999884 3788999999999999999999 7899999999999999876 79999999999765
Q ss_pred cCCCCc--------------------------ccccccCcccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCC
Q 002063 830 ENSPKV--------------------------SDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVE 882 (973)
Q Consensus 830 ~~~~~~--------------------------~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~ell~g~~pf~ 882 (973)
...... ......+||+.|+|||++.+. .|+.++||||+||++|||++|+.||.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~ 248 (361)
T 4f9c_A 169 HDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFY 248 (361)
T ss_dssp TTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSS
T ss_pred CCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCC
Confidence 432110 112235799999999999775 58999999999999999999999996
Q ss_pred cc
Q 002063 883 EE 884 (973)
Q Consensus 883 ~~ 884 (973)
..
T Consensus 249 ~~ 250 (361)
T 4f9c_A 249 KA 250 (361)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 39
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.6e-44 Score=403.35 Aligned_cols=264 Identities=24% Similarity=0.307 Sum_probs=202.1
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEe------CCe
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLK------GGS 745 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~------~~~ 745 (973)
++|++.+.||+|+||+||+|+++.+|+.||||++... ...+.+.+|++++++++|||||++++++.. .+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 4799999999999999999999999999999998653 334567899999999999999999998764 357
Q ss_pred eEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccC
Q 002063 746 SFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGV 825 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl 825 (973)
.|+|||||+ |+|.+++.. ...+++..+..++.||+.||+||| +++||||||||+|||++.++.+||+|||+
T Consensus 134 ~~ivmE~~~-g~L~~~i~~-----~~~l~~~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NIl~~~~~~~Ki~DFGl 204 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHS-----SQPLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGM 204 (398)
T ss_dssp EEEEEECCS-EEHHHHHTS-----SSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEEeCCC-CCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHH---HCcCcCCCcCccccccCCCCCEEEeecce
Confidence 899999995 789998864 346899999999999999999999 78999999999999999999999999999
Q ss_pred CccccCCCC--cccccccCcccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccc
Q 002063 826 AKIAENSPK--VSDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNH 902 (973)
Q Consensus 826 ~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~ 902 (973)
|+....... .......+||+.|||||++.+. .++.++||||+||++|||++|+.||.+. +..+....+.......
T Consensus 205 a~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~--~~~~~l~~I~~~~g~p 282 (398)
T 4b99_A 205 ARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGK--NYVHQLQLIMMVLGTP 282 (398)
T ss_dssp CBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCS--SHHHHHHHHHHHHCCC
T ss_pred eeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCC--CHHHHHHHHHHhcCCC
Confidence 987643221 2223456899999999998875 4689999999999999999999999753 1111111111111100
Q ss_pred cc-chh---------hcc--ccccCh----hhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 903 EN-VLK---------VLD--CEVASE----SIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 903 ~~-~~~---------~~~--~~~~~~----~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
.. ... ... +..... ........+.+|+.+||+.||.+|||+.|+++|-
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp 346 (398)
T 4b99_A 283 SPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHP 346 (398)
T ss_dssp CGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSG
T ss_pred ChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCH
Confidence 00 000 000 000000 0112235678999999999999999999999874
No 40
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=1.5e-42 Score=421.35 Aligned_cols=503 Identities=20% Similarity=0.189 Sum_probs=395.7
Q ss_pred EEeecCCCCCccccccccCCCCCcEEeCCCCcccCccCccccCCCCCcEEEecCCcccCCCCC-cCCCCCCCEEeccCcc
Q 002063 77 EISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPD-LSALKNLEIFDLSINY 155 (973)
Q Consensus 77 ~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~-l~~l~~L~~L~Ls~n~ 155 (973)
.++.++.+++ .+|+.|. +++++|||++|+|++..|.+|.++++|++|+|++|+|++.++. |++|++|++|+|++|+
T Consensus 35 ~~~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~ 111 (635)
T 4g8a_A 35 TYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 111 (635)
T ss_dssp EEECTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred EEECCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCc
Confidence 4678888888 6777654 5799999999999977778999999999999999999998874 9999999999999999
Q ss_pred cCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccccCCC-CCChhhhccCCCCeeeccccccccccc
Q 002063 156 FTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRG-RIPESISELRELGTLDICRNKISGEFP 234 (973)
Q Consensus 156 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~-~~p~~l~~l~~L~~L~L~~n~l~~~~p 234 (973)
+++..+.+|.++++|++|++++|.++... +..|+++++|++|+|++|.+++ .+|..++.+++|++|+|++|+|++..+
T Consensus 112 l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~-~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 190 (635)
T 4g8a_A 112 IQSLALGAFSGLSSLQKLVAVETNLASLE-NFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYC 190 (635)
T ss_dssp CCEECGGGGTTCTTCCEEECTTSCCCCST-TCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECG
T ss_pred CCCCCHHHhcCCCCCCEEECCCCcCCCCC-hhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCcccccccc
Confidence 99888889999999999999999997432 3468999999999999999986 468889999999999999999998888
Q ss_pred hhhhcccccc----EEEeecccCCCCCCccccccccccEEEeeccccccc-cCCccCCCCCccEEEcc------------
Q 002063 235 RSIRKLQKLW----KIELYANNLTGELPAELGNLTLLQEFDISSNQMYGK-LPEEIGNLKNLTVFQCF------------ 297 (973)
Q Consensus 235 ~~l~~l~~L~----~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~l~------------ 297 (973)
..+..+.+++ .++++.|.++...+. ......++.+++++|..... .+..+..+..++...+.
T Consensus 191 ~~l~~L~~l~~~~~~~~ls~n~l~~i~~~-~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~ 269 (635)
T 4g8a_A 191 TDLRVLHQMPLLNLSLDLSLNPMNFIQPG-AFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEK 269 (635)
T ss_dssp GGGHHHHTCTTCCCEEECTTCCCCEECTT-TTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSC
T ss_pred ccccchhhhhhhhhhhhcccCcccccCcc-cccchhhhhhhhhcccccccccchhhcCCccccccccccccccccccccc
Confidence 8888877654 688999999854444 44445677888888765422 22223444444443332
Q ss_pred ------------------cCCCCC---CCCCCcCCccccceeeccccccCCCCCccccccccccccccccccccccCChh
Q 002063 298 ------------------KNNFSG---EFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKY 356 (973)
Q Consensus 298 ------------------~N~l~~---~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~ 356 (973)
.+.... ..+..+..+.+++.+.+.+|.+... ..+.....|+.|++++|.+.+..+..
T Consensus 270 ~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~--~~~~~~~~L~~L~l~~~~~~~~~~~~ 347 (635)
T 4g8a_A 270 FDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERV--KDFSYNFGWQHLELVNCKFGQFPTLK 347 (635)
T ss_dssp CCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEEC--GGGGSCCCCSEEEEESCEESSCCCCB
T ss_pred ccccccccccchhhhhhhhhhhcccccchhhhhhhhcccccccccccccccc--cccccchhhhhhhcccccccCcCccc
Confidence 221111 1223344555666677777666532 23555677888888888887544433
Q ss_pred hhhhhhHHHHHhhhccCCCCCCCcccCccccceEeccccccc--ccCCccccCCCCcceEeccCCcCCCCCCCccCCCCC
Q 002063 357 LCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLS--GKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTS 434 (973)
Q Consensus 357 ~~~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~ 434 (973)
+..+. .+...++..+. +.....+++|+.|++++|.+. +..+..+..+.+|+.++++.|.+.... ..+..+++
T Consensus 348 l~~L~----~l~l~~n~~~~-~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~~-~~~~~l~~ 421 (635)
T 4g8a_A 348 LKSLK----RLTFTSNKGGN-AFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMS-SNFLGLEQ 421 (635)
T ss_dssp CTTCC----EEEEESCCSCC-BCCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEEEC-SCCTTCTT
T ss_pred chhhh----hcccccccCCC-Ccccccccccccchhhccccccccccccchhhhhhhhhhhcccccccccc-cccccccc
Confidence 22211 11222232222 334567899999999999986 456777788999999999999887644 45678899
Q ss_pred CCEEEcccCCCCCCCC-hhhhcCCCCCEEecCCCcCCCCccccccccccCCEEEccCccc-ccCCCccccCccccchhhc
Q 002063 435 LSQLVLQNNRFSGELP-SELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENAL-TGSIPNEMGDCARIVDLNL 512 (973)
Q Consensus 435 L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l-~~~~p~~~~~l~~L~~L~L 512 (973)
|+.++++.|+.....+ ..+..+++++.++++.|.+++..+..+..++.|+.|+|++|++ .+..|..|..+++|+.|+|
T Consensus 422 L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~L 501 (635)
T 4g8a_A 422 LEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDL 501 (635)
T ss_dssp CCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEEC
T ss_pred ccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEEC
Confidence 9999999988775544 5678899999999999999999999999999999999999975 4568899999999999999
Q ss_pred cccccccCCCccccccCCCCeeecCCCccCCCCCchhhccc-CceEEccCCccccccCcccccCCC---CccccCCCCCc
Q 002063 513 ARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLK-LSSIDLSENQLSGSVPLDFLRMGG---DGAFAGNEGLC 588 (973)
Q Consensus 513 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-L~~l~ls~N~l~~~~p~~~~~~~~---~~~~~~n~~lc 588 (973)
++|+|++..|..|.++++|++|+|++|+|++.+|..+..++ |+.|||++|++++..|..+..+.. .-...+||+.|
T Consensus 502 s~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C 581 (635)
T 4g8a_A 502 SQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 581 (635)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCC
T ss_pred CCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcc
Confidence 99999999999999999999999999999988888898886 999999999999999987766533 23579999998
Q ss_pred cCcc
Q 002063 589 LDQS 592 (973)
Q Consensus 589 ~~~~ 592 (973)
....
T Consensus 582 ~C~~ 585 (635)
T 4g8a_A 582 TCEH 585 (635)
T ss_dssp SGGG
T ss_pred cCCc
Confidence 6544
No 41
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1.8e-43 Score=411.54 Aligned_cols=251 Identities=23% Similarity=0.265 Sum_probs=204.0
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHH---HHHHHhcCCCceeeEeEEEEeCCe
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAE---MEILGKIRHRNILKLYACLLKGGS 745 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E---~~~l~~l~hpniv~l~~~~~~~~~ 745 (973)
.+++|++.+.||+|+||+||+|+++.+|+.||||++.+. .......+| +++++.++|||||+++++|.+++.
T Consensus 187 slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ 266 (689)
T 3v5w_A 187 TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDK 266 (689)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSE
T ss_pred chHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCE
Confidence 356899999999999999999999999999999998752 223334444 566677799999999999999999
Q ss_pred eEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccC
Q 002063 746 SFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGV 825 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl 825 (973)
.|+||||++||+|.+++.+. ..+++..+..++.||+.||+||| +++||||||||+|||++.+|.+||+|||+
T Consensus 267 lylVmEy~~GGdL~~~l~~~-----~~l~E~~a~~y~~qIl~aL~yLH---~~gIiHRDLKPeNILld~~G~vKL~DFGl 338 (689)
T 3v5w_A 267 LSFILDLMNGGDLHYHLSQH-----GVFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGL 338 (689)
T ss_dssp EEEEECCCCSCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred EEEEEecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHeEEeCCCCEEecccce
Confidence 99999999999999999864 35899999999999999999999 89999999999999999999999999999
Q ss_pred CccccCCCCcccccccCccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccccc
Q 002063 826 AKIAENSPKVSDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHEN 904 (973)
Q Consensus 826 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 904 (973)
|+...... ....+||+.|||||++.+ ..|+.++||||+||++|||++|+.||...... +..............
T Consensus 339 A~~~~~~~----~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~--~~~~i~~~i~~~~~~ 412 (689)
T 3v5w_A 339 ACDFSKKK----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK--DKHEIDRMTLTMAVE 412 (689)
T ss_dssp CEECSSCC----CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCC--CHHHHHHHHHHCCCC
T ss_pred eeecCCCC----CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHhhcCCCCC
Confidence 98765432 234689999999999964 57999999999999999999999999764322 222222211111111
Q ss_pred chhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCC-----HHHHHHHh
Q 002063 905 VLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPP-----MREVVKML 950 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt-----~~evl~~L 950 (973)
.+......+.+++.+|++.||.+|++ +.||++|-
T Consensus 413 ------------~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~Hp 451 (689)
T 3v5w_A 413 ------------LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESP 451 (689)
T ss_dssp ------------CCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSG
T ss_pred ------------CCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCc
Confidence 11123456789999999999999998 68888764
No 42
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=3.2e-43 Score=419.67 Aligned_cols=434 Identities=19% Similarity=0.203 Sum_probs=366.5
Q ss_pred CceEEEeecCCCCCccccccccCCCCCcEEeCCCCcccCccCccccCCCCCcEEEecCCcccCCCCCcCCCCCCCEEecc
Q 002063 73 GRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLS 152 (973)
Q Consensus 73 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls 152 (973)
.+++.|+|+++.+++..+..++.+++|++|+|++|.+++..|..|+++++|++|+|++|+++..++. .+++|++|+|+
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~--~l~~L~~L~Ls 129 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQNISCC--PMASLRHLDLS 129 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCCEECSC--CCTTCSEEECC
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCCccCcc--ccccCCEEECC
Confidence 6899999999999988889999999999999999999988899999999999999999999977666 89999999999
Q ss_pred CcccCC-ccccccccccccceEEccCCcCCCCCCcccccCCCCC--CEEEcccccC--CCCCChhhhccC--CCCeeecc
Q 002063 153 INYFTG-RFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNL--TYLFLAHCNL--RGRIPESISELR--ELGTLDIC 225 (973)
Q Consensus 153 ~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L--~~L~L~~n~l--~~~~p~~l~~l~--~L~~L~L~ 225 (973)
+|++++ ..|..|+++++|++|++++|.++.. .+..+++| ++|++++|.+ ++..|..+..+. .| .++++
T Consensus 130 ~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~----~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l-~l~l~ 204 (562)
T 3a79_B 130 FNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL----DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVL-HLVFH 204 (562)
T ss_dssp SSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT----TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEE-EEEEC
T ss_pred CCCccccCchHhhcccCcccEEecCCCccccC----chhhhhhceeeEEEeecccccccccCcccccccCcceE-EEEec
Confidence 999997 4578999999999999999999753 34555555 9999999999 888888888765 33 56889
Q ss_pred ccccccccch-hhhccccccEEEeecccC-----CCCCCccccccccccEEEeecccccccc----CCccCCCCCccEEE
Q 002063 226 RNKISGEFPR-SIRKLQKLWKIELYANNL-----TGELPAELGNLTLLQEFDISSNQMYGKL----PEEIGNLKNLTVFQ 295 (973)
Q Consensus 226 ~n~l~~~~p~-~l~~l~~L~~L~L~~n~l-----~~~~~~~l~~l~~L~~L~Ls~N~l~~~~----p~~~~~l~~L~~L~ 295 (973)
+|.+.+.++. .+..+++|+.|++++|.. .+ .+..+..+++|+.|+++++.+.+.. +..+ ..++|++|+
T Consensus 205 ~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~-~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~-~~~~L~~L~ 282 (562)
T 3a79_B 205 PNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMT-FLSELTRGPTLLNVTLQHIETTWKCSVKLFQFF-WPRPVEYLN 282 (562)
T ss_dssp SSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHH-HHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHH-TTSSEEEEE
T ss_pred CccchhhhhhhcccccceEEEecccccccccchHHH-HHHHHhccCcceEEEecCCcCcHHHHHHHHHhh-hcccccEEE
Confidence 9998876654 467789999999999862 22 2245678889999999888776432 2222 235899999
Q ss_pred cccCCCCCCCCCCc-----CCccccceeeccccccCCCCC-cccccc---ccccccccccccccccCChhhhhhhhHHHH
Q 002063 296 CFKNNFSGEFPSGF-----GDMRKLFAFSIYGNRFSGPFP-ENLGRY---TALTDVDISENQFSGSFPKYLCEKRKLLNL 366 (973)
Q Consensus 296 l~~N~l~~~~p~~~-----~~l~~L~~L~l~~N~l~~~~~-~~l~~l---~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~l 366 (973)
+++|.+++.+|..+ ..++.|+.+++..|.+ .+| ..+..+ .+|+.|++++|.+...
T Consensus 283 l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~~~~~L~~L~l~~n~~~~~-------------- 346 (562)
T 3a79_B 283 IYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--LFSKEALYSVFAEMNIKMLSISDTPFIHM-------------- 346 (562)
T ss_dssp EEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHHHHTCCCSEEEEESSCCCCC--------------
T ss_pred EeccEeeccccchhhhcccccchheehhhccccee--ecChhhhhhhhccCcceEEEccCCCcccc--------------
Confidence 99999999999887 8888888888888887 345 333333 6799999999988621
Q ss_pred HhhhccCCCCCCCcccCccccceEecccccccccCCccccCCCCcceEeccCCcCCCCC--CCccCCCCCCCEEEcccCC
Q 002063 367 LALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGI--SPLIGLSTSLSQLVLQNNR 444 (973)
Q Consensus 367 l~l~nn~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~~~~L~~L~L~~N~ 444 (973)
+ ....+++|++|+|++|++++.+|..+..+++|+.|++++|++++.. +..+..+++|++|+|++|+
T Consensus 347 -----------~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~ 414 (562)
T 3a79_B 347 -----------V-CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNS 414 (562)
T ss_dssp -----------C-CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSC
T ss_pred -----------c-CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCc
Confidence 1 1257789999999999999999999999999999999999999864 3568899999999999999
Q ss_pred CCCCCCh-hhhcCCCCCEEecCCCcCCCCccccccccccCCEEEccCcccccCCCccccCccccchhhccccccccCCCc
Q 002063 445 FSGELPS-ELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPR 523 (973)
Q Consensus 445 l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 523 (973)
+++.+|. .+..+++|++|+|++|++++.+|..+. ++|++|+|++|+|+ .+|..+.++++|+.|+|++|+|++ +|.
T Consensus 415 l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~-l~~ 490 (562)
T 3a79_B 415 LNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKS-VPD 490 (562)
T ss_dssp CBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCC-CCT
T ss_pred CCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCC-CCH
Confidence 9985554 588899999999999999987776665 79999999999999 677777799999999999999994 555
Q ss_pred c-ccccCCCCeeecCCCccCCCCCc
Q 002063 524 S-LSLLSSLNALNLSGNKLTGSIPD 547 (973)
Q Consensus 524 ~-~~~l~~L~~L~L~~N~l~~~~p~ 547 (973)
. |..+++|+.|+|++|++++..|.
T Consensus 491 ~~~~~l~~L~~L~l~~N~~~c~c~~ 515 (562)
T 3a79_B 491 GVFDRLTSLQYIWLHDNPWDCTCPG 515 (562)
T ss_dssp TSTTTCTTCCCEECCSCCBCCCHHH
T ss_pred HHHhcCCCCCEEEecCCCcCCCcch
Confidence 4 99999999999999999986664
No 43
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=7e-43 Score=383.49 Aligned_cols=291 Identities=30% Similarity=0.497 Sum_probs=232.8
Q ss_pred CchHHHHHHHHHHHhcCCCcccccCCCCCCCCCCC--cceeeeCCCC--CceEEEeecCCCCCc--cccccccCCCCCcE
Q 002063 28 SLNVETQALIQFKSKLKDPHGVLDSWKESADSPCG--FSGITCDSVT--GRVTEISFDNKSLSG--EISSSISALQSLTV 101 (973)
Q Consensus 28 ~~~~~~~aLl~~k~~~~d~~~~l~~W~~~~~~~c~--w~gv~C~~~~--~~v~~l~l~~~~l~~--~~~~~l~~l~~L~~ 101 (973)
|.++|++||++||+++.||. .+++|..+. +||. |.||+|+..+ ++|+.|+|++++++| .+|+.++.+++|++
T Consensus 3 c~~~~~~aL~~~k~~~~~~~-~l~~W~~~~-~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~ 80 (313)
T 1ogq_A 3 CNPQDKQALLQIKKDLGNPT-TLSSWLPTT-DCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNF 80 (313)
T ss_dssp SCHHHHHHHHHHHHHTTCCG-GGTTCCTTS-CTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCSE
T ss_pred CCHHHHHHHHHHHHhcCCcc-cccCCCCCC-CCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCCe
Confidence 56789999999999999987 799998654 5787 9999998755 899999999999999 99999999999999
Q ss_pred EeCCC-CcccCccCccccCCCCCcEEEecCCcccCCCC-CcCCCCCCCEEeccCcccCCccccccccccccceEEccCCc
Q 002063 102 LSLPF-NVLSGKLPLELSNCSNLKVLNVTGNAMVGSVP-DLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNV 179 (973)
Q Consensus 102 L~Ls~-n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~ 179 (973)
|+|++ |.+++.+|..|+++++|++|+|++|.+.+..| .++++++|++|+|++|.+++.+|..|..+++|++|++++|.
T Consensus 81 L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 160 (313)
T 1ogq_A 81 LYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNR 160 (313)
T ss_dssp EEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSC
T ss_pred eeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCc
Confidence 99995 99999999999999999999999999986655 59999999999999999998888888888888888888887
Q ss_pred CCCCCCcccccCCC-CCCEEEcccccCCCCCChhhhccCCCCeeeccccccccccchhhhccccccEEEeecccCCCCCC
Q 002063 180 YDEAEIPESIGNLK-NLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELP 258 (973)
Q Consensus 180 l~~~~ip~~~~~l~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~ 258 (973)
++. .+|..++.++ +|++|++++|++++.+|..+..++ |++|+|++|++++..|..+..+++|++|+|++|.+++.+|
T Consensus 161 l~~-~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 238 (313)
T 1ogq_A 161 ISG-AIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLG 238 (313)
T ss_dssp CEE-ECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGG
T ss_pred ccC-cCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecC
Confidence 753 3567777776 777777777777777777777776 7777777777777777777777777777777777775544
Q ss_pred ccccccccccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCccccceeeccccc
Q 002063 259 AELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNR 324 (973)
Q Consensus 259 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 324 (973)
. +..+++|++|+|++|++++.+|..+..+++|+.|++++|++++.+|.. +.+++|+.|++++|+
T Consensus 239 ~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 239 K-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNK 302 (313)
T ss_dssp G-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSS
T ss_pred c-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCC
Confidence 4 666677777777777777667776766777777777777666666654 555666666665555
No 44
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=2.5e-42 Score=397.98 Aligned_cols=409 Identities=23% Similarity=0.311 Sum_probs=258.9
Q ss_pred CceEEEeecCCCCCccccccccCCCCCcEEeCCCCcccCccCccccCCCCC-------------cEEEecCCcccCCCCC
Q 002063 73 GRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNL-------------KVLNVTGNAMVGSVPD 139 (973)
Q Consensus 73 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L-------------~~L~L~~n~l~~~~~~ 139 (973)
.++..++++++++ |.+|++++++++|++|++++|.++|.+|..++++.+| ++|++++|.+++.+..
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~lp~~ 89 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSLPEL 89 (454)
T ss_dssp ------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSCCCSC
T ss_pred ccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccccCCCC
Confidence 4678899999999 8999999999999999999999999999999998875 8999999998886552
Q ss_pred cCCCCCCCEEeccCcccCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccccCCCCCChhhhccCCC
Q 002063 140 LSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELREL 219 (973)
Q Consensus 140 l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L 219 (973)
.++|++|++++|.+++ +|.. +++|++|++++|.++. +|.. .++|++|++++|++++ +| .++.+++|
T Consensus 90 ---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~--l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L 155 (454)
T 1jl5_A 90 ---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA--LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFL 155 (454)
T ss_dssp ---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC--CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTC
T ss_pred ---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc--ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCC
Confidence 3789999999999986 5643 4788999999998863 3322 2689999999999986 66 58889999
Q ss_pred CeeeccccccccccchhhhccccccEEEeecccCCCCCCccccccccccEEEeeccccccccCCccCCCCCccEEEcccC
Q 002063 220 GTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKN 299 (973)
Q Consensus 220 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 299 (973)
++|++++|++++ +|..+ .+|++|++++|++++ +| .++++++|++|++++|++++ +|... ++|+.|++++|
T Consensus 156 ~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n 225 (454)
T 1jl5_A 156 KIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVAGNN 225 (454)
T ss_dssp CEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEECCSS
T ss_pred CEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---CcccEEECcCC
Confidence 999999998884 56543 588899999999885 55 58888999999999998874 55433 47888899998
Q ss_pred CCCCCCCCCcCCccccceeeccccccCCCCCccccccccccccccccccccccCChhhhhhhhHHHHHhhhccCCCCCCC
Q 002063 300 NFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPN 379 (973)
Q Consensus 300 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~nn~~~~~p~ 379 (973)
++. .+| .++.+++|+.|++++|++++ +|.. .++|+.|++++|++++ +| .
T Consensus 226 ~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~------------------------~ 274 (454)
T 1jl5_A 226 ILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LP------------------------E 274 (454)
T ss_dssp CCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CC------------------------C
T ss_pred cCC-ccc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cC------------------------c
Confidence 888 566 48888889999998888885 4443 3678888888888873 33 2
Q ss_pred cccCccccceEecccccccccCCccccCCCCcceEeccCCcCCCCCCCccCCCCCCCEEEcccCCCCCCCChhhhcCCCC
Q 002063 380 SYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNL 459 (973)
Q Consensus 380 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L 459 (973)
. +++|++|++++|++++. |.. .++|+.|++++|++++.. ...++|++|++++|++++ +|.. +++|
T Consensus 275 ~---~~~L~~L~ls~N~l~~l-~~~---~~~L~~L~l~~N~l~~i~----~~~~~L~~L~Ls~N~l~~-lp~~---~~~L 339 (454)
T 1jl5_A 275 L---PQSLTFLDVSENIFSGL-SEL---PPNLYYLNASSNEIRSLC----DLPPSLEELNVSNNKLIE-LPAL---PPRL 339 (454)
T ss_dssp C---CTTCCEEECCSSCCSEE-SCC---CTTCCEEECCSSCCSEEC----CCCTTCCEEECCSSCCSC-CCCC---CTTC
T ss_pred c---cCcCCEEECcCCccCcc-cCc---CCcCCEEECcCCcCCccc----CCcCcCCEEECCCCcccc-cccc---CCcC
Confidence 1 26788888888888852 211 267888888888887633 123578888888888885 5544 5788
Q ss_pred CEEecCCCcCCCCccccccccccCCEEEccCccccc--CCCccccCccccchhhccccccccCCCccccccCCCCeeecC
Q 002063 460 ERLILTNNNFSGKIPSALGALRQLSSLHLEENALTG--SIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLS 537 (973)
Q Consensus 460 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 537 (973)
+.|++++|+++ .+|. .+++|++|+|++|++++ .+|.+++. |+.|.+.+.+|.. +++|+.|+|+
T Consensus 340 ~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~--------L~~n~~~~~i~~~---~~~L~~L~ls 404 (454)
T 1jl5_A 340 ERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLREFPDIPESVED--------LRMNSHLAEVPEL---PQNLKQLHVE 404 (454)
T ss_dssp CEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSSCCCCCTTCCE--------EECCC---------------------
T ss_pred CEEECCCCccc-cccc---hhhhccEEECCCCCCCcCCCChHHHHh--------hhhcccccccccc---cCcCCEEECC
Confidence 88888888888 4555 46788888888888887 56665543 3456677777763 5788999999
Q ss_pred CCccCC--CCCchhhcccCceEEccCCccccccCccc
Q 002063 538 GNKLTG--SIPDNLMKLKLSSIDLSENQLSGSVPLDF 572 (973)
Q Consensus 538 ~N~l~~--~~p~~~~~l~L~~l~ls~N~l~~~~p~~~ 572 (973)
+|++++ .+|.+ ++.|.+.+|.+.|.+|...
T Consensus 405 ~N~l~~~~~iP~s-----l~~L~~~~~~~~~~~~~~~ 436 (454)
T 1jl5_A 405 TNPLREFPDIPES-----VEDLRMNSERVVDPYEFAH 436 (454)
T ss_dssp -------------------------------------
T ss_pred CCcCCccccchhh-----HhheeCcCcccCCccccCH
Confidence 999986 66654 4556678888888776543
No 45
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=5e-43 Score=412.90 Aligned_cols=253 Identities=19% Similarity=0.270 Sum_probs=210.7
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc--ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEc
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 752 (973)
+++|++.+.||+|+||+||+|+++.+|+.||||++... ...+.+.+|+++|+.++|||||+++++|.+++..|+||||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 57899999999999999999999999999999998763 3456788999999999999999999999999999999999
Q ss_pred cCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCC--CceEEecccCCcccc
Q 002063 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDED--YEPKIADFGVAKIAE 830 (973)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~--~~~kl~Dfgl~~~~~ 830 (973)
|+||+|.+++... ...+++..+..++.||+.||+||| +++|+||||||+|||++.+ +.+||+|||+|+...
T Consensus 236 ~~gg~L~~~i~~~----~~~l~e~~~~~~~~qi~~al~ylH---~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~ 308 (573)
T 3uto_A 236 MSGGELFEKVADE----HNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD 308 (573)
T ss_dssp CCCCBHHHHHTCT----TSCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECC
T ss_pred cCCCcHHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhccccCCCCCCEEEeeccceeEcc
Confidence 9999999998642 346889999999999999999999 7899999999999999854 899999999999775
Q ss_pred CCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhcc
Q 002063 831 NSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLD 910 (973)
Q Consensus 831 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (973)
.... ....+||+.|||||++.+..|+.++||||+||++|||++|+.||... +.............
T Consensus 309 ~~~~---~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~-----~~~~~~~~i~~~~~------- 373 (573)
T 3uto_A 309 PKQS---VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGE-----NDDETLRNVKSCDW------- 373 (573)
T ss_dssp TTSE---EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCS-----SHHHHHHHHHTTCC-------
T ss_pred CCCc---eeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc-----CHHHHHHHHHhCCC-------
Confidence 4422 23457999999999999999999999999999999999999999753 11122222111111
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 911 CEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 911 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
.............+.+|+.+||+.||.+|||+.|+++|-
T Consensus 374 -~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hp 412 (573)
T 3uto_A 374 -NMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHP 412 (573)
T ss_dssp -CCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHST
T ss_pred -CCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCc
Confidence 111112223345678999999999999999999999973
No 46
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=6.4e-42 Score=398.03 Aligned_cols=376 Identities=21% Similarity=0.205 Sum_probs=259.9
Q ss_pred CCCCEEeccCcccCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccccCCCCCChhhhccCCCCeee
Q 002063 144 KNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLD 223 (973)
Q Consensus 144 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~ 223 (973)
++|++|||++|.+++..|..|.++++|++|++++|.+...--|..+.++++|++|+|++|++++..|..|+++++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 34455555555554444444444455555555444443211234566677777777777777766677777777777777
Q ss_pred ccccccccccchh--hhccccccEEEeecccCCCCCCcc-ccccccccEEEeeccccccccCCccCCC--CCccEEEccc
Q 002063 224 ICRNKISGEFPRS--IRKLQKLWKIELYANNLTGELPAE-LGNLTLLQEFDISSNQMYGKLPEEIGNL--KNLTVFQCFK 298 (973)
Q Consensus 224 L~~n~l~~~~p~~--l~~l~~L~~L~L~~n~l~~~~~~~-l~~l~~L~~L~Ls~N~l~~~~p~~~~~l--~~L~~L~l~~ 298 (973)
|++|++++..+.. ++.+++|++|+|++|++++..|.. +.++++|++|++++|++.+..|..+..+ .+|+.|++++
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~ 189 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSS 189 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTT
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccccccccccc
Confidence 7777776654444 666777777777777776655554 6667777777777777766666666554 4566666666
Q ss_pred CCCCCCCCCCcCCccccceeeccccccCCCCCccccccccccccccccccccccCChhhhhhhhHHHHHhhhccCCCCCC
Q 002063 299 NNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVP 378 (973)
Q Consensus 299 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~nn~~~~~p 378 (973)
|.+.+..+..++. .....+..+++|++|++++|++++..|..++...
T Consensus 190 n~l~~~~~~~~~~----------------~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~----------------- 236 (455)
T 3v47_A 190 ITLQDMNEYWLGW----------------EKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAI----------------- 236 (455)
T ss_dssp CBCTTCSTTCTTH----------------HHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHT-----------------
T ss_pred Ccccccchhhccc----------------cccccccccceeeeEecCCCcccccchhhhhccc-----------------
Confidence 6665433322110 0011233456788888888888776666554321
Q ss_pred CcccCccccceEecccccccccCCccccCCCCcceEeccCCcCCCCCCCccC--CCCCCCEEEcccCCCCCCCChhhhcC
Q 002063 379 NSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIG--LSTSLSQLVLQNNRFSGELPSELGRL 456 (973)
Q Consensus 379 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~--~~~~L~~L~L~~N~l~~~~p~~~~~l 456 (973)
..++|+.|++++|.+.+... ..+.+.+.....+. ..++|+.|++++|++.+..|..++.+
T Consensus 237 ----~~~~L~~L~l~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l 298 (455)
T 3v47_A 237 ----AGTKIQSLILSNSYNMGSSF--------------GHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHF 298 (455)
T ss_dssp ----TTCCEEEEECTTCTTTSCCT--------------TCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTC
T ss_pred ----cccceeeEeecccccccccc--------------chhhhccCcccccccccccCceEEEecCccccccchhhcccC
Confidence 23678888888887664211 12222222222222 23678999999999998888889999
Q ss_pred CCCCEEecCCCcCCCCccccccccccCCEEEccCcccccCCCccccCccccchhhccccccccCCCccccccCCCCeeec
Q 002063 457 TNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNL 536 (973)
Q Consensus 457 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 536 (973)
++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|+++++|+.|+|++|++++..|..|..+++|++|+|
T Consensus 299 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 378 (455)
T 3v47_A 299 TDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELAL 378 (455)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEEC
Confidence 99999999999999888888999999999999999998888888999999999999999999888889999999999999
Q ss_pred CCCccCCCCCchhhccc-CceEEccCCccccccCc
Q 002063 537 SGNKLTGSIPDNLMKLK-LSSIDLSENQLSGSVPL 570 (973)
Q Consensus 537 ~~N~l~~~~p~~~~~l~-L~~l~ls~N~l~~~~p~ 570 (973)
++|+|++..+..+..++ |+.|++++|+++|.||.
T Consensus 379 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 413 (455)
T 3v47_A 379 DTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 413 (455)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred CCCccccCCHhHhccCCcccEEEccCCCcccCCCc
Confidence 99999976666677776 99999999999999994
No 47
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=4.9e-42 Score=399.02 Aligned_cols=369 Identities=18% Similarity=0.198 Sum_probs=287.1
Q ss_pred CCCCEEEcccccCCCCCChhhhccCCCCeeecccccccccc-chhhhccccccEEEeecccCCCCCCccccccccccEEE
Q 002063 193 KNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEF-PRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFD 271 (973)
Q Consensus 193 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~-p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~ 271 (973)
++|++|+|++|.+++..|..|+++++|++|+|++|.+.+.+ +..|..+++|++|+|++|++++..|..|.++++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 56777777777777666777777777777777777776444 45677777777777777777766677777777777777
Q ss_pred eeccccccccCCc--cCCCCCccEEEcccCCCCCCCCCC-cCCccccceeeccccccCCCCCcccccc--cccccccccc
Q 002063 272 ISSNQMYGKLPEE--IGNLKNLTVFQCFKNNFSGEFPSG-FGDMRKLFAFSIYGNRFSGPFPENLGRY--TALTDVDISE 346 (973)
Q Consensus 272 Ls~N~l~~~~p~~--~~~l~~L~~L~l~~N~l~~~~p~~-~~~l~~L~~L~l~~N~l~~~~~~~l~~l--~~L~~L~Ls~ 346 (973)
|++|++++..|.. +.++++|++|++++|++.+..|.. +..+++|++|++++|++++..+..+..+ .+|+.|++++
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~ 189 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSS 189 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTT
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccccccccccc
Confidence 7777777644443 777778888888888877776665 7778888888888888887777777766 6788888888
Q ss_pred ccccccCChhhhhhhhHHHHHhhhccCCCCCCCcccCccccceEecccccccccCCccccCC---CCcceEeccCCcCCC
Q 002063 347 NQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWAL---PNVGMLDFGDNDFTG 423 (973)
Q Consensus 347 N~l~~~~p~~~~~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L~L~~N~l~~ 423 (973)
|.+.+..+..+... ....+..+++|++|+|++|++++..|..+... ++|+.|++++|.+.+
T Consensus 190 n~l~~~~~~~~~~~----------------~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~ 253 (455)
T 3v47_A 190 ITLQDMNEYWLGWE----------------KCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMG 253 (455)
T ss_dssp CBCTTCSTTCTTHH----------------HHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTS
T ss_pred Ccccccchhhcccc----------------ccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccc
Confidence 88875443332110 11234566899999999999998888877664 789999999988764
Q ss_pred CCCCccCCCCCCCEEEcccCCCCCCCChhhhcC--CCCCEEecCCCcCCCCccccccccccCCEEEccCcccccCCCccc
Q 002063 424 GISPLIGLSTSLSQLVLQNNRFSGELPSELGRL--TNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEM 501 (973)
Q Consensus 424 ~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 501 (973)
.. +..+.+.+..+..+..+ ++|+.|++++|++++..|..+..+++|++|+|++|++++..|..|
T Consensus 254 ~~--------------~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~ 319 (455)
T 3v47_A 254 SS--------------FGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAF 319 (455)
T ss_dssp CC--------------TTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTT
T ss_pred cc--------------cchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHh
Confidence 32 22334443444444443 689999999999999999999999999999999999999999999
Q ss_pred cCccccchhhccccccccCCCccccccCCCCeeecCCCccCCCCCchhhccc-CceEEccCCccccccCcccccCCC--C
Q 002063 502 GDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLK-LSSIDLSENQLSGSVPLDFLRMGG--D 578 (973)
Q Consensus 502 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-L~~l~ls~N~l~~~~p~~~~~~~~--~ 578 (973)
+++++|+.|+|++|++++..|..|..+++|++|+|++|++++..|..+..++ |+.|+|++|++++..+..+..+.. .
T Consensus 320 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 399 (455)
T 3v47_A 320 WGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQK 399 (455)
T ss_dssp TTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCE
T ss_pred cCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccE
Confidence 9999999999999999988899999999999999999999988899998886 999999999999765544444433 2
Q ss_pred ccccCCCCCccCc
Q 002063 579 GAFAGNEGLCLDQ 591 (973)
Q Consensus 579 ~~~~~n~~lc~~~ 591 (973)
-.+.+|+..|..|
T Consensus 400 L~l~~N~l~~~~~ 412 (455)
T 3v47_A 400 IWLHTNPWDCSCP 412 (455)
T ss_dssp EECCSSCBCCCTT
T ss_pred EEccCCCcccCCC
Confidence 3578998888765
No 48
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=8.5e-42 Score=393.55 Aligned_cols=397 Identities=23% Similarity=0.285 Sum_probs=240.0
Q ss_pred ccccCCCCCcEEeCCCCcccCccCccccCCCCCcEEEecCCcccCCCC-CcCCCCCC-------------CEEeccCccc
Q 002063 91 SSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVP-DLSALKNL-------------EIFDLSINYF 156 (973)
Q Consensus 91 ~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~-~l~~l~~L-------------~~L~Ls~n~l 156 (973)
+.-...++|++|++++|++ +.+|.+|+++++|++|++++|.+.+..| .++.+++| ++|++++|.+
T Consensus 5 p~~~~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l 83 (454)
T 1jl5_A 5 PRNVSNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGL 83 (454)
T ss_dssp ------------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCC
T ss_pred ccccccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcc
Confidence 3334568999999999999 7999999999999999999999986655 58888765 8888888888
Q ss_pred CCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccccCCCCCChhhhccCCCCeeeccccccccccchh
Q 002063 157 TGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRS 236 (973)
Q Consensus 157 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~ 236 (973)
++ +|.. .++|++|++++|.++. +|.. +++|++|++++|++++ +|.. .++|++|++++|++++ +| .
T Consensus 84 ~~-lp~~---~~~L~~L~l~~n~l~~--lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~ 148 (454)
T 1jl5_A 84 SS-LPEL---PPHLESLVASCNSLTE--LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-E 148 (454)
T ss_dssp SC-CCSC---CTTCSEEECCSSCCSS--CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-C
T ss_pred cc-CCCC---cCCCCEEEccCCcCCc--cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-c
Confidence 75 3332 3678888888888764 5543 3678888888888875 3321 1678888888888875 66 5
Q ss_pred hhccccccEEEeecccCCCCCCccccccccccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCccccc
Q 002063 237 IRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLF 316 (973)
Q Consensus 237 l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~ 316 (973)
++++++|++|++++|++++ +|..+ .+|++|++++|++++ +| .++++++|+.|++++|++++ +|... ++|+
T Consensus 149 ~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~ 218 (454)
T 1jl5_A 149 LQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLE 218 (454)
T ss_dssp CTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCC
T ss_pred cCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---Cccc
Confidence 8888888888888888884 55433 478888888888875 55 57888888888888888875 44332 4788
Q ss_pred eeeccccccCCCCCccccccccccccccccccccccCChhhhhhhhHHHHHhhhccCCCCCCCcccCccccceEeccccc
Q 002063 317 AFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNH 396 (973)
Q Consensus 317 ~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~Ls~N~ 396 (973)
.|++++|.++ .+|. ++.+++|++|++++|++++ +| .. +++|++|++++|+
T Consensus 219 ~L~l~~n~l~-~lp~-~~~l~~L~~L~l~~N~l~~-l~------------------------~~---~~~L~~L~l~~N~ 268 (454)
T 1jl5_A 219 SIVAGNNILE-ELPE-LQNLPFLTTIYADNNLLKT-LP------------------------DL---PPSLEALNVRDNY 268 (454)
T ss_dssp EEECCSSCCS-SCCC-CTTCTTCCEEECCSSCCSS-CC------------------------SC---CTTCCEEECCSSC
T ss_pred EEECcCCcCC-cccc-cCCCCCCCEEECCCCcCCc-cc------------------------cc---ccccCEEECCCCc
Confidence 8888888887 5663 7788888888888888773 22 11 2578888888888
Q ss_pred ccccCCccccCCCCcceEeccCCcCCCCCCCccCCCCCCCEEEcccCCCCCCCChhhhcC-CCCCEEecCCCcCCCCccc
Q 002063 397 LSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRL-TNLERLILTNNNFSGKIPS 475 (973)
Q Consensus 397 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~p~ 475 (973)
+++ +|.. .++|+.|++++|++++... ..++|++|++++|++++ ++ .+ ++|+.|++++|++++ +|.
T Consensus 269 l~~-l~~~---~~~L~~L~ls~N~l~~l~~----~~~~L~~L~l~~N~l~~-i~----~~~~~L~~L~Ls~N~l~~-lp~ 334 (454)
T 1jl5_A 269 LTD-LPEL---PQSLTFLDVSENIFSGLSE----LPPNLYYLNASSNEIRS-LC----DLPPSLEELNVSNNKLIE-LPA 334 (454)
T ss_dssp CSC-CCCC---CTTCCEEECCSSCCSEESC----CCTTCCEEECCSSCCSE-EC----CCCTTCCEEECCSSCCSC-CCC
T ss_pred ccc-cCcc---cCcCCEEECcCCccCcccC----cCCcCCEEECcCCcCCc-cc----CCcCcCCEEECCCCcccc-ccc
Confidence 875 4543 3678888888888776431 23578888888888874 22 23 478888888888875 454
Q ss_pred cccccccCCEEEccCcccccCCCccccCccccchhhcccccccc--CCCccccccCCCCeeecCCCccCCCCCchhhccc
Q 002063 476 ALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSG--NIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLK 553 (973)
Q Consensus 476 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 553 (973)
. +++|++|++++|++++ +|. .+++|+.|++++|++++ .+|.++.. |+.|++.|.+|..+ ..
T Consensus 335 ~---~~~L~~L~L~~N~l~~-lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~--------L~~n~~~~~i~~~~--~~ 397 (454)
T 1jl5_A 335 L---PPRLERLIASFNHLAE-VPE---LPQNLKQLHVEYNPLREFPDIPESVED--------LRMNSHLAEVPELP--QN 397 (454)
T ss_dssp C---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSSCCCCCTTCCE--------EECCC-------------
T ss_pred c---CCcCCEEECCCCcccc-ccc---hhhhccEEECCCCCCCcCCCChHHHHh--------hhhccccccccccc--Cc
Confidence 3 4678888888888874 454 36778888888888877 56655543 34566777777642 23
Q ss_pred CceEEccCCcccc--ccCccccc
Q 002063 554 LSSIDLSENQLSG--SVPLDFLR 574 (973)
Q Consensus 554 L~~l~ls~N~l~~--~~p~~~~~ 574 (973)
|+.||+++|+++| .+|..+..
T Consensus 398 L~~L~ls~N~l~~~~~iP~sl~~ 420 (454)
T 1jl5_A 398 LKQLHVETNPLREFPDIPESVED 420 (454)
T ss_dssp -----------------------
T ss_pred CCEEECCCCcCCccccchhhHhh
Confidence 8999999999998 78875433
No 49
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=7.1e-42 Score=377.96 Aligned_cols=279 Identities=34% Similarity=0.528 Sum_probs=228.7
Q ss_pred HHHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc--ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEE
Q 002063 672 AEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 672 ~~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 749 (973)
....++|++.+.||+|+||+||+|++. +++.||||++... ...+.+.+|++++++++||||+++++++..++..++|
T Consensus 35 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 113 (321)
T 2qkw_B 35 EEATNNFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILI 113 (321)
T ss_dssp CCCCCCCSCCCCSCBCSSSEEEEEECT-TCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEE
T ss_pred HHHHhccCccceeecCCCeeEEEEEEC-CCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEE
Confidence 345679999999999999999999975 4889999987653 4467789999999999999999999999999999999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccc
Q 002063 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
|||+++|+|.+++... ......+++..+..++.|+++||+||| +++++||||||+||+++.++.+||+|||+++..
T Consensus 114 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 189 (321)
T 2qkw_B 114 YKYMENGNLKRHLYGS-DLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKG 189 (321)
T ss_dssp EECCTTCBTGGGSSSS-CCCSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCSTTEEECTTCCEEECCCTTCEEC
T ss_pred EEcCCCCcHHHHHhcc-CCCccccCHHHHHHHHHHHHHHHHHhc---CCCeecCCCCHHHEEECCCCCEEEeeccccccc
Confidence 9999999999988653 222345899999999999999999999 789999999999999999999999999999865
Q ss_pred cCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCC-CccHHHHHHHhhcccccchhh
Q 002063 830 ENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGD-GKDIVYWVSTHLNNHENVLKV 908 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 908 (973)
.............||+.|+|||++.+..++.++|||||||++|||++|+.||...... ......|...... ...+...
T Consensus 190 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 268 (321)
T 2qkw_B 190 TELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHN-NGQLEQI 268 (321)
T ss_dssp SSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHT-TTCCCSS
T ss_pred ccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccc-cccHHHh
Confidence 4433322333456899999999999899999999999999999999999999765322 2333333332222 2223445
Q ss_pred ccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCC
Q 002063 909 LDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPC 956 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~ 956 (973)
.++........+....+.+++.+||+.||++||++.|++++|+.+...
T Consensus 269 ~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~ 316 (321)
T 2qkw_B 269 VDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316 (321)
T ss_dssp SSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred cChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence 555555555677888999999999999999999999999999987543
No 50
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=6.1e-41 Score=371.45 Aligned_cols=282 Identities=39% Similarity=0.670 Sum_probs=230.8
Q ss_pred HHHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc---cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEE
Q 002063 672 AEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD---GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 672 ~~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
....++|++.+.||+|+||+||+|+.. +++.||||++.... ....+.+|++++++++||||+++++++..++..++
T Consensus 26 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 104 (326)
T 3uim_A 26 QVASDNFSNKNILGRGGFGKVYKGRLA-DGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL 104 (326)
T ss_dssp HTTTTSSCSTTEEECCSSSEEEEECCS-SSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEE
T ss_pred HHHhhccccceeEecCCCcEEEEEEec-CCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecCCceEE
Confidence 445678999999999999999999865 48899999987632 23368899999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcc
Q 002063 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||+++|+|.+++... ......+++..+..++.|++.||+|||+.+..+|+||||||+||+++.++.+||+|||+++.
T Consensus 105 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~ 183 (326)
T 3uim_A 105 VYPYMANGSVASCLRER-PESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 183 (326)
T ss_dssp EEECCTTCBHHHHHHCC-STTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEE
T ss_pred EEEeccCCCHHHHHHhc-cccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCccccc
Confidence 99999999999999864 23345589999999999999999999953333999999999999999999999999999987
Q ss_pred ccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcc---cCCCccHHHHHHHhhcccccc
Q 002063 829 AENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEE---YGDGKDIVYWVSTHLNNHENV 905 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~---~~~~~~~~~~~~~~~~~~~~~ 905 (973)
...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||+.. .........|+....... ..
T Consensus 184 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-~~ 261 (326)
T 3uim_A 184 MDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK-KL 261 (326)
T ss_dssp CCSSSS-CEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSC-CS
T ss_pred cCcccc-cccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhch-hh
Confidence 653322 2223356899999999999889999999999999999999999999642 123334444544433332 24
Q ss_pred hhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCCC
Q 002063 906 LKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPCT 957 (973)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~ 957 (973)
....+.........+....+.+++.+||+.||.+|||+.||+++|++.....
T Consensus 262 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~~~ 313 (326)
T 3uim_A 262 EALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAE 313 (326)
T ss_dssp TTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSCSS
T ss_pred hhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcchhh
Confidence 4555555555667788889999999999999999999999999999865543
No 51
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=8e-41 Score=364.67 Aligned_cols=251 Identities=23% Similarity=0.345 Sum_probs=208.5
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeec--cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEc
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK--GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~--~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 752 (973)
..+|++.+.||+|+||+||+|++..+++.||||++.. ....+.+.+|+.++++++||||+++++++..++..|+||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 4689999999999999999999999999999999865 34566788999999999999999999999999999999999
Q ss_pred cCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCC
Q 002063 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENS 832 (973)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~ 832 (973)
+++|+|.+++... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 99 ~~~~~L~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 169 (297)
T 3fxz_A 99 LAGGSLTDVVTET------CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 169 (297)
T ss_dssp CTTCBHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCST
T ss_pred CCCCCHHHHHhhc------CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCc
Confidence 9999999999753 4788999999999999999999 789999999999999999999999999999876543
Q ss_pred CCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhcccc
Q 002063 833 PKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCE 912 (973)
Q Consensus 833 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
.. ......||+.|+|||++.+..++.++||||+||++|||++|+.||.... .......+. .....
T Consensus 170 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--~~~~~~~~~--~~~~~--------- 234 (297)
T 3fxz_A 170 QS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN--PLRALYLIA--TNGTP--------- 234 (297)
T ss_dssp TC--CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--HHHHHHHHH--HHCSC---------
T ss_pred cc--ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHH--hCCCC---------
Confidence 22 2334579999999999999999999999999999999999999996531 111111111 00000
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 913 VASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 913 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
....+......+.+++.+||+.||++|||+.|++++-
T Consensus 235 -~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~ 271 (297)
T 3fxz_A 235 -ELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQ 271 (297)
T ss_dssp -CCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCG
T ss_pred -CCCCccccCHHHHHHHHHHccCChhHCcCHHHHhhCh
Confidence 0011223345688999999999999999999999863
No 52
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=6.6e-41 Score=376.77 Aligned_cols=261 Identities=27% Similarity=0.383 Sum_probs=212.9
Q ss_pred hcCCcccCeecccCcEEEEEEEEc-------CCCceEEEEEeecc---ccHHHHHHHHHHHHhc-CCCceeeEeEEEEeC
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLK-------KNAGTVAVKQLWKG---DGVKVFAAEMEILGKI-RHRNILKLYACLLKG 743 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~-------~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~ 743 (973)
.++|++.+.||+|+||+||+|++. .++..||||++... ...+.+.+|+++++++ +||||+++++++..+
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 357889999999999999999974 34567999998763 3446788999999999 899999999999999
Q ss_pred CeeEEEEEccCCCchHHHHHhhhcC-----------CCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeee
Q 002063 744 GSSFLVLEYMPNGNLFQALHKRVKE-----------GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILL 812 (973)
Q Consensus 744 ~~~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill 812 (973)
+..|+||||+++|+|.+++...... ....+++..+..++.|+++||+||| +++|+||||||+||++
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchhhEEE
Confidence 9999999999999999999864211 1235789999999999999999999 7899999999999999
Q ss_pred cCCCceEEecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccH
Q 002063 813 DEDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDI 891 (973)
Q Consensus 813 ~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~ 891 (973)
+.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||.... ....
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~--~~~~ 314 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP--VEEL 314 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--GGGH
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCC--HHHH
Confidence 9999999999999987655443333444567889999999999999999999999999999999 999997542 2222
Q ss_pred HHHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002063 892 VYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
...+.... ....+......+.+++.+||+.||++||++.|++++|+++.
T Consensus 315 ~~~~~~~~--------------~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il 363 (370)
T 2psq_A 315 FKLLKEGH--------------RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 363 (370)
T ss_dssp HHHHHTTC--------------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHhcCC--------------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 22211110 01111233456889999999999999999999999998764
No 53
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=5.5e-41 Score=370.67 Aligned_cols=264 Identities=25% Similarity=0.294 Sum_probs=208.1
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCC----eeEE
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIRHRNILKLYACLLKGG----SSFL 748 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~----~~~l 748 (973)
...+|++.+.||+|+||+||+|++. ++.||||++... .....+.+|+.++++++||||+++++++..+. ..++
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~l 99 (322)
T 3soc_A 22 QSMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWL 99 (322)
T ss_dssp TTEEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred chhhchhhheecccCceEEEEEEEC--CCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEE
Confidence 3457899999999999999999886 789999998653 33445667899999999999999999998754 4699
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCC----------CeEecCCCCCCeeecCCCce
Q 002063 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSP----------PIIHRDIKSSNILLDEDYEP 818 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~----------~ivH~Dlkp~Nill~~~~~~ 818 (973)
||||+++|+|.++++.. .+++..+..++.|+++||+||| +. +|+||||||+||+++.++.+
T Consensus 100 v~e~~~~g~L~~~l~~~------~~~~~~~~~i~~qi~~al~~LH---~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~ 170 (322)
T 3soc_A 100 ITAFHEKGSLSDFLKAN------VVSWNELCHIAETMARGLAYLH---EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTA 170 (322)
T ss_dssp EEECCTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHT---CCEEEETTEEECEEECSCCSGGGEEECTTCCE
T ss_pred EEecCCCCCHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHH---hhccccccccCCCEEeCCCChHhEEECCCCeE
Confidence 99999999999999753 4899999999999999999999 77 99999999999999999999
Q ss_pred EEecccCCccccCCCCcccccccCccccccccccccc-----CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCc----
Q 002063 819 KIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYT-----CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGK---- 889 (973)
Q Consensus 819 kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~---- 889 (973)
||+|||+++...............||+.|+|||++.+ ..++.++|||||||++|||++|+.||........
T Consensus 171 kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~ 250 (322)
T 3soc_A 171 CIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFE 250 (322)
T ss_dssp EECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTH
T ss_pred EEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchh
Confidence 9999999987765444333444679999999999876 3566788999999999999999999976432211
Q ss_pred -------cHHHHHHHhhcccccchhhccccccC-hhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002063 890 -------DIVYWVSTHLNNHENVLKVLDCEVAS-ESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 890 -------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
....+......... .+.... .........+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 317 (322)
T 3soc_A 251 EEIGQHPSLEDMQEVVVHKKK------RPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQ 317 (322)
T ss_dssp HHHCSSCCHHHHHHHHTTSCC------CCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hhhccCCchhhhhhhhhcccC------CCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 11111111111100 011100 012244567899999999999999999999999998764
No 54
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=3.8e-40 Score=363.60 Aligned_cols=249 Identities=26% Similarity=0.335 Sum_probs=208.1
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 750 (973)
+++|++.+.||+|+||+||+|++..+++.||||++... ...+.+.+|+++++.++||||+++++++..++..|+||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 56899999999999999999999999999999998753 34456789999999999999999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcccc
Q 002063 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~ 830 (973)
||+++|+|.+++... ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++....
T Consensus 94 e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 165 (328)
T 3fe3_A 94 EYASGGEVFDYLVAH-----GRMKEKEARSKFRQIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFT 165 (328)
T ss_dssp CCCTTCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGS
T ss_pred ECCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCCHHHEEEcCCCCEEEeeccCceecC
Confidence 999999999999764 34789999999999999999999 7899999999999999999999999999998665
Q ss_pred CCCCcccccccCcccccccccccccCCCC-ccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhc
Q 002063 831 NSPKVSDYSCFAGTHGYIAPELAYTCKVS-EKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVL 909 (973)
Q Consensus 831 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
... ......||+.|+|||++.+..+. .++||||+||++|||++|+.||... +...............
T Consensus 166 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~-----~~~~~~~~i~~~~~~~---- 233 (328)
T 3fe3_A 166 VGG---KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ-----NLKELRERVLRGKYRI---- 233 (328)
T ss_dssp SSC---GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHCCCCC----
T ss_pred CCC---ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCC-----CHHHHHHHHHhCCCCC----
Confidence 432 23345799999999999888875 7899999999999999999999654 2222222221111100
Q ss_pred cccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 910 DCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
+......+.+++.+||+.||.+|||+.|+++|-.
T Consensus 234 --------p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h~~ 267 (328)
T 3fe3_A 234 --------PFYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRW 267 (328)
T ss_dssp --------CTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTCTT
T ss_pred --------CCCCCHHHHHHHHHHCCCChhHCcCHHHHhcCHh
Confidence 1112345788999999999999999999998743
No 55
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=9.7e-41 Score=366.97 Aligned_cols=260 Identities=26% Similarity=0.408 Sum_probs=210.7
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeec--cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEc
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK--GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~--~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 752 (973)
.++|++.+.||+|+||+||+|++..+++.||+|++.. ....+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 3578899999999999999999999999999998765 34556789999999999999999999999999999999999
Q ss_pred cCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCC
Q 002063 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENS 832 (973)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~ 832 (973)
+++|+|.+++... ...+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 89 ~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 161 (310)
T 3s95_A 89 IKGGTLRGIIKSM----DSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDE 161 (310)
T ss_dssp CTTCBHHHHHHHC----CTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEECTTSCEEECCCTTCEECC--
T ss_pred cCCCcHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCcCeEEECCCCCEEEeecccceecccc
Confidence 9999999999863 346899999999999999999999 789999999999999999999999999999876433
Q ss_pred CCcc------------cccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhc
Q 002063 833 PKVS------------DYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLN 900 (973)
Q Consensus 833 ~~~~------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~ 900 (973)
.... ......||+.|+|||++.+..++.++||||||+++|||++|..||.................
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~-- 239 (310)
T 3s95_A 162 KTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGF-- 239 (310)
T ss_dssp ------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHH--
T ss_pred cccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcc--
Confidence 2211 11135799999999999999999999999999999999999999875422111100000000
Q ss_pred ccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002063 901 NHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
.+... +......+.+++.+||+.||++||++.++++.|+.+..
T Consensus 240 --------~~~~~----~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~ 282 (310)
T 3s95_A 240 --------LDRYC----PPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRM 282 (310)
T ss_dssp --------HHHTC----CTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --------ccccC----CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 00000 11223457889999999999999999999999998753
No 56
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=4.8e-41 Score=368.37 Aligned_cols=264 Identities=31% Similarity=0.475 Sum_probs=201.2
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 750 (973)
.++|++.+.||+|+||+||+|++. ++.||||++... ...+.+.+|++++++++||||+++++++..++..++||
T Consensus 36 ~~~y~i~~~lG~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 113 (309)
T 3p86_A 36 WCDLNIKEKIGAGSFGTVHRAEWH--GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVT 113 (309)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEE
T ss_pred hhHceeeeEeecCCCeEEEEEEEC--CCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEE
Confidence 468899999999999999999874 789999998653 23456889999999999999999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCC--eEecCCCCCCeeecCCCceEEecccCCcc
Q 002063 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPP--IIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~--ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||+++|+|.+++.... ....+++..+..++.|++.||+||| +.+ |+||||||+||+++.++.+||+|||+++.
T Consensus 114 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH---~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 188 (309)
T 3p86_A 114 EYLSRGSLYRLLHKSG--AREQLDERRRLSMAYDVAKGMNYLH---NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL 188 (309)
T ss_dssp ECCTTCBHHHHHHSTT--HHHHSCHHHHHHHHHHHHHHHHHHH---TSSSCCCCTTCCGGGEEECTTCCEEECCCC----
T ss_pred ecCCCCcHHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHH---cCCCCEECCCCChhhEEEeCCCcEEECCCCCCcc
Confidence 9999999999997531 1224889999999999999999999 778 99999999999999999999999999975
Q ss_pred ccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhh
Q 002063 829 AENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKV 908 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (973)
..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.... .............
T Consensus 189 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~-----~~~~~~~~~~~~~----- 256 (309)
T 3p86_A 189 KASTF--LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLN-----PAQVVAAVGFKCK----- 256 (309)
T ss_dssp ---------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSC-----HHHHHHHHHHSCC-----
T ss_pred ccccc--cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhcCC-----
Confidence 43321 12234568999999999999999999999999999999999999997541 1111111110110
Q ss_pred ccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCCCCCCCC
Q 002063 909 LDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPCTDKSPD 962 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~~~~ 962 (973)
....+......+.+++.+||+.||.+||++.++++.|+.+.....+++.
T Consensus 257 -----~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p~~~ 305 (309)
T 3p86_A 257 -----RLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPPPN 305 (309)
T ss_dssp -----CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-------
T ss_pred -----CCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCCCCC
Confidence 0011122345688999999999999999999999999988765544443
No 57
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.9e-40 Score=364.66 Aligned_cols=253 Identities=26% Similarity=0.366 Sum_probs=201.1
Q ss_pred HHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEE
Q 002063 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 749 (973)
...++|++.+.||+|+||+||+|++..+++.||||++... ...+.+.+|++++++++||||+++++++...+..++|
T Consensus 7 ~l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv 86 (347)
T 3zgw_A 7 ELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMV 86 (347)
T ss_dssp TTTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEE
Confidence 3457899999999999999999999999999999998763 2345688999999999999999999999999999999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccc
Q 002063 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
|||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++...
T Consensus 87 ~E~~~gg~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~ 158 (347)
T 3zgw_A 87 LEYCPGGELFDYIISQ-----DRLSEEETRVVFRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKP 158 (347)
T ss_dssp EECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC-
T ss_pred EeCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCccHHHEEEcCCCCEEEEeccCcccc
Confidence 9999999999999764 25889999999999999999999 789999999999999999999999999998765
Q ss_pred cCCCCcccccccCcccccccccccccCCC-CccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhh
Q 002063 830 ENSPKVSDYSCFAGTHGYIAPELAYTCKV-SEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKV 908 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (973)
..... .......||+.|+|||++.+..+ +.++||||+||++|||++|+.||... +...............
T Consensus 159 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~-----~~~~~~~~i~~~~~~~--- 229 (347)
T 3zgw_A 159 KGNKD-YHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDD-----NVMALYKKIMRGKYDV--- 229 (347)
T ss_dssp --------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHTCCCC---
T ss_pred cCCCC-ccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCC-----CHHHHHHHHHcCCCCC---
Confidence 43221 12234578999999999988775 88999999999999999999999753 2222222221111111
Q ss_pred ccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 909 LDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
+......+.+++.+||+.||++|||+.|++++-.
T Consensus 230 ---------p~~~s~~~~~li~~~L~~dP~~Rps~~eil~hp~ 263 (347)
T 3zgw_A 230 ---------PKWLSPSSILLLQQMLQVDPKKRISMKNLLNHPW 263 (347)
T ss_dssp ---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTCHH
T ss_pred ---------CCCCCHHHHHHHHHHcccCHhHCcCHHHHhcCcc
Confidence 1112345778999999999999999999998754
No 58
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1.8e-39 Score=374.44 Aligned_cols=366 Identities=19% Similarity=0.200 Sum_probs=238.3
Q ss_pred CCCCccccccccCCCCCcEEeCCCCcccCccCccccCCCCCcEEEecCCcccCCCCCcCCCCCCCEEeccCcccCCcccc
Q 002063 83 KSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPR 162 (973)
Q Consensus 83 ~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~ 162 (973)
.+..+..+..++.+++|++|++++|.+++ +| .++.+++|++|+|++|++++.+ ++.+++|++|++++|.+++. +
T Consensus 28 ~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~~~--~~~l~~L~~L~Ls~N~l~~~-~- 101 (457)
T 3bz5_A 28 FEMQATDTISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITTLD--LSQNTNLTYLACDSNKLTNL-D- 101 (457)
T ss_dssp TTCCTTSEEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSCCC--CTTCTTCSEEECCSSCCSCC-C-
T ss_pred cCcCcccccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCeEc--cccCCCCCEEECcCCCCcee-e-
Confidence 34455556678888888888888888885 35 6888888888888888888763 78888888888888888864 3
Q ss_pred ccccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccccCCCCCChhhhccCCCCeeeccccccccccchhhhcccc
Q 002063 163 WVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQK 242 (973)
Q Consensus 163 ~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~ 242 (973)
++++++|++|++++|.++. +| ++.+++|++|++++|++++. + ++.+++|++|++++|+..+.+ .++.+++
T Consensus 102 -~~~l~~L~~L~L~~N~l~~--l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~ 171 (457)
T 3bz5_A 102 -VTPLTKLTYLNCDTNKLTK--LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQ 171 (457)
T ss_dssp -CTTCTTCCEEECCSSCCSC--CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTT
T ss_pred -cCCCCcCCEEECCCCcCCe--ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCc
Confidence 7788888888888887764 33 77788888888888888763 2 677788888888888544444 3667777
Q ss_pred ccEEEeecccCCCCCCccccccccccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCccccceeeccc
Q 002063 243 LWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYG 322 (973)
Q Consensus 243 L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~ 322 (973)
|++|++++|++++ +| +..+++|+.|++++|++++. .++.+++|+.|++++|++++ +| ++.+++|+.|++++
T Consensus 172 L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~ 242 (457)
T 3bz5_A 172 LTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSV 242 (457)
T ss_dssp CCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCS
T ss_pred CCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeC
Confidence 7777777777775 34 66777777777777777753 36677777777777777776 44 66677777777777
Q ss_pred cccCCCCCccccccccccccccccccccccCChhhhhhhhHHHHHhhhccCCCCCCCcccCccccceEecccccccccCC
Q 002063 323 NRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIP 402 (973)
Q Consensus 323 N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 402 (973)
|++++.. ++.+++|+.|++++|+ |+.|++++|.+.+.+|
T Consensus 243 N~l~~~~---~~~l~~L~~L~l~~n~--------------------------------------L~~L~l~~n~~~~~~~ 281 (457)
T 3bz5_A 243 NPLTELD---VSTLSKLTTLHCIQTD--------------------------------------LLEIDLTHNTQLIYFQ 281 (457)
T ss_dssp SCCSCCC---CTTCTTCCEEECTTCC--------------------------------------CSCCCCTTCTTCCEEE
T ss_pred CcCCCcC---HHHCCCCCEEeccCCC--------------------------------------CCEEECCCCccCCccc
Confidence 7776543 3345556655555443 3344555555444444
Q ss_pred ccccCCCCcceEeccCCcCCCCCCCccCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEecCCCcCCCCcccccccccc
Q 002063 403 DGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQ 482 (973)
Q Consensus 403 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 482 (973)
+..+++|+.|++++|...+.++. ..++|+.|++++| ++|++|++++|++++. + ++.+++
T Consensus 282 --~~~l~~L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~~-------------~~L~~L~L~~N~l~~l-~--l~~l~~ 340 (457)
T 3bz5_A 282 --AEGCRKIKELDVTHNTQLYLLDC---QAAGITELDLSQN-------------PKLVYLYLNNTELTEL-D--VSHNTK 340 (457)
T ss_dssp --CTTCTTCCCCCCTTCTTCCEEEC---TTCCCSCCCCTTC-------------TTCCEEECTTCCCSCC-C--CTTCTT
T ss_pred --ccccccCCEEECCCCcccceecc---CCCcceEechhhc-------------ccCCEEECCCCccccc-c--cccCCc
Confidence 23445555555555544333321 2233444433333 4566666666666653 2 666666
Q ss_pred CCEEEccCcccccCCCccccCccccchhhccccccccCCCccccccCCCCeeecCCCccCCCCCch
Q 002063 483 LSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDN 548 (973)
Q Consensus 483 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 548 (973)
|+.|++++|+|++ ++.|..|++++|.++|. ..+..|+.++|++|+++|.+|..
T Consensus 341 L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~ 393 (457)
T 3bz5_A 341 LKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSPD 393 (457)
T ss_dssp CSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCTT
T ss_pred CcEEECCCCCCCC--------ccccccccccCCcEEec-----ceeeecCccccccCcEEEEcChh
Confidence 6666666666664 23455566666666654 23444555555555555555544
No 59
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=2.6e-40 Score=364.89 Aligned_cols=256 Identities=25% Similarity=0.337 Sum_probs=208.9
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc---cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEE
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD---GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 750 (973)
..++|++.+.||+|+||+||+|++..+++.||||++.... ..+.+.+|+.+++.++||||+++++++.+++..|+||
T Consensus 5 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~ 84 (323)
T 3tki_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (323)
T ss_dssp TTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence 3568999999999999999999999999999999986532 2356889999999999999999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcccc
Q 002063 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~ 830 (973)
||+++|+|.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++....
T Consensus 85 e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 156 (323)
T 3tki_A 85 EYCSGGELFDRIEP-----DIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFR 156 (323)
T ss_dssp ECCTTEEGGGGSBT-----TTBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECE
T ss_pred EcCCCCcHHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccccchHHEEEeCCCCEEEEEeeccceec
Confidence 99999999988753 345899999999999999999999 7899999999999999999999999999998765
Q ss_pred CCCCcccccccCcccccccccccccCCC-CccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhc
Q 002063 831 NSPKVSDYSCFAGTHGYIAPELAYTCKV-SEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVL 909 (973)
Q Consensus 831 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
............||+.|+|||++.+..+ +.++||||+||++|||++|+.||............+.... .
T Consensus 157 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~----~------ 226 (323)
T 3tki_A 157 YNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK----T------ 226 (323)
T ss_dssp ETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTC----T------
T ss_pred cCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhccc----c------
Confidence 4433333445679999999999987776 6789999999999999999999976533222222221110 0
Q ss_pred cccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 910 DCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
...........+.+++.+||+.||++|||+.|++++-.
T Consensus 227 ----~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~ 264 (323)
T 3tki_A 227 ----YLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRW 264 (323)
T ss_dssp ----TSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTT
T ss_pred ----cCCccccCCHHHHHHHHHHccCChhhCcCHHHHhhChh
Confidence 00111223456788999999999999999999998754
No 60
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=1.4e-40 Score=367.68 Aligned_cols=261 Identities=26% Similarity=0.407 Sum_probs=209.6
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCc---eEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAG---TVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~---~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
..+|++.+.||+|+||+||+|++..+++ .||||++... ...+.+.+|++++++++||||+++++++.+++..|+
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 127 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence 4678999999999999999999975444 5999998753 345678899999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcc
Q 002063 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||+++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 128 v~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 200 (325)
T 3kul_A 128 VTEYMENGSLDTFLRTH----DGQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRV 200 (325)
T ss_dssp EEECCTTCBHHHHHHTT----TTCSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCSSCEE
T ss_pred EeeCCCCCcHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEECCCCCEEECCCCcccc
Confidence 99999999999999753 346899999999999999999999 78999999999999999999999999999987
Q ss_pred ccCCCCc-ccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccch
Q 002063 829 AENSPKV-SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVL 906 (973)
Q Consensus 829 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (973)
....... .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||.... ... ..........
T Consensus 201 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~--~~~---~~~~~~~~~~--- 272 (325)
T 3kul_A 201 LEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMT--NRD---VISSVEEGYR--- 272 (325)
T ss_dssp CC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSC--HHH---HHHHHHTTCC---
T ss_pred cccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCC--HHH---HHHHHHcCCC---
Confidence 6543221 12223456788999999998999999999999999999999 999996541 111 1111111100
Q ss_pred hhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCCCC
Q 002063 907 KVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPCTD 958 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~~ 958 (973)
..........+.+++.+||+.||++||++.++++.|+.+....+
T Consensus 273 --------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~ 316 (325)
T 3kul_A 273 --------LPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPE 316 (325)
T ss_dssp --------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC
T ss_pred --------CCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcc
Confidence 01112334568899999999999999999999999999865443
No 61
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.1e-39 Score=357.84 Aligned_cols=272 Identities=23% Similarity=0.289 Sum_probs=214.3
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCC--eeEEEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGG--SSFLVL 750 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~--~~~lv~ 750 (973)
.+|++.+.||+|+||+||+|++..+++.||||++... ...+.+.+|++++++++||||+++++++.... ..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 5789999999999999999999999999999998752 34567889999999999999999999998755 789999
Q ss_pred EccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeee----cCCCceEEecccCC
Q 002063 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILL----DEDYEPKIADFGVA 826 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill----~~~~~~kl~Dfgl~ 826 (973)
||+++|+|.+++.... ....+++..+..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||++
T Consensus 89 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a 163 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPS--NAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (319)
T ss_dssp ECCTTCBHHHHHHSGG--GTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEECTTSCEEEEECCCTTC
T ss_pred eCCCCCCHHHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEeccCCCCceEEEccCCCc
Confidence 9999999999998642 2234899999999999999999999 7899999999999999 77788999999999
Q ss_pred ccccCCCCcccccccCcccccccccccc--------cCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHh
Q 002063 827 KIAENSPKVSDYSCFAGTHGYIAPELAY--------TCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTH 898 (973)
Q Consensus 827 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~ 898 (973)
+....... .....||+.|+|||++. +..++.++|||||||++|||++|+.||.................
T Consensus 164 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~ 240 (319)
T 4euu_A 164 RELEDDEQ---FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKII 240 (319)
T ss_dssp EECCTTCC---BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHH
T ss_pred eecCCCCc---eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHh
Confidence 87654322 23356899999999986 57789999999999999999999999975432222211111111
Q ss_pred hccccc----chhhc--------cccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002063 899 LNNHEN----VLKVL--------DCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 899 ~~~~~~----~~~~~--------~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
...... ..... +..............+.+++.+||+.||++|||++|++++..+...
T Consensus 241 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~ 309 (319)
T 4euu_A 241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (319)
T ss_dssp HHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC
T ss_pred cCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhh
Confidence 111000 00000 0011112345677788999999999999999999999999987643
No 62
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1.4e-39 Score=359.95 Aligned_cols=249 Identities=27% Similarity=0.327 Sum_probs=207.6
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 749 (973)
.++|++.+.||+|+||+||+|+.+.+++.||||++.+. .....+.+|+++++.++||||+++++++...+..|+|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 46789999999999999999999999999999998753 3456788999999999999999999999999999999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccc
Q 002063 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
|||+++|+|.+++... ..+++..+..++.||+.||+||| +++|+||||||+||+++.+|.+||+|||+++..
T Consensus 84 ~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~ 155 (337)
T 1o6l_A 84 MEYANGGELFFHLSRE-----RVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEG 155 (337)
T ss_dssp EECCTTCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred EeCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCCHHHEEECCCCCEEEeeccchhhc
Confidence 9999999999999764 35789999999999999999999 789999999999999999999999999999754
Q ss_pred cCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhc
Q 002063 830 ENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVL 909 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
.... .......||+.|+|||++.+..++.++||||+||++|||++|+.||... +..............
T Consensus 156 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~-----~~~~~~~~i~~~~~~----- 223 (337)
T 1o6l_A 156 ISDG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ-----DHERLFELILMEEIR----- 223 (337)
T ss_dssp CCTT--CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHCCCC-----
T ss_pred ccCC--CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCC-----CHHHHHHHHHcCCCC-----
Confidence 3221 1223457999999999999999999999999999999999999999653 111222221111110
Q ss_pred cccccChhhHHHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHHh
Q 002063 910 DCEVASESIKEDMIKLLKIAVVCTTKLPNLRP-----PMREVVKML 950 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----t~~evl~~L 950 (973)
.+......+.+++.+||+.||.+|| ++.|+++|-
T Consensus 224 -------~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~ 262 (337)
T 1o6l_A 224 -------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHR 262 (337)
T ss_dssp -------CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSG
T ss_pred -------CCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCC
Confidence 1112345678899999999999999 899998863
No 63
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.3e-39 Score=354.80 Aligned_cols=262 Identities=26% Similarity=0.335 Sum_probs=209.1
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeec-----cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEE
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK-----GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~-----~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
..++|++.+.||+|+||+||+|++..+++.||+|++.. ....+.+.+|++++++++||||+++++++..++..|+
T Consensus 9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 88 (294)
T 4eqm_A 9 INERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYL 88 (294)
T ss_dssp EETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEE
T ss_pred hhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEE
Confidence 34689999999999999999999999999999998754 2334678899999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcc
Q 002063 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++..
T Consensus 89 v~e~~~g~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~ 160 (294)
T 4eqm_A 89 VMEYIEGPTLSEYIESH-----GPLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKA 160 (294)
T ss_dssp EEECCCSCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCSSSTT
T ss_pred EEeCCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEEeCCCccc
Confidence 99999999999999864 25889999999999999999999 78999999999999999999999999999986
Q ss_pred ccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcc-cccchh
Q 002063 829 AENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNN-HENVLK 907 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~ 907 (973)
...... .......||+.|+|||++.+..++.++||||+|+++|||++|+.||.... ........... .....
T Consensus 161 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~-----~~~~~~~~~~~~~~~~~- 233 (294)
T 4eqm_A 161 LSETSL-TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGET-----AVSIAIKHIQDSVPNVT- 233 (294)
T ss_dssp C--------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSC-----HHHHHHHHHSSCCCCHH-
T ss_pred cccccc-cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHhhccCCCcc-
Confidence 643322 12233568999999999999999999999999999999999999997541 11111111111 11000
Q ss_pred hccccccChhhHHHHHHHHHHHHHhcCCCCCCCC-CHHHHHHHhhcCCCCC
Q 002063 908 VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRP-PMREVVKMLADADPCT 957 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-t~~evl~~L~~~~~~~ 957 (973)
.....+.+..+.+++.+|++.||.+|| +++++.+.|+.+....
T Consensus 234 -------~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~ 277 (294)
T 4eqm_A 234 -------TDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHEN 277 (294)
T ss_dssp -------HHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSS
T ss_pred -------hhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhc
Confidence 011122345688999999999999998 9999999999876544
No 64
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=7.6e-41 Score=377.70 Aligned_cols=257 Identities=24% Similarity=0.314 Sum_probs=208.7
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc---cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD---GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 751 (973)
.++|++.+.||+|+||+||+|++..+++.||||++.... ..+.+.+|++++++++||||+++++++..++..|+|||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 357889999999999999999999889999999987532 23467889999999999999999999999999999999
Q ss_pred ccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccC
Q 002063 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~ 831 (973)
|+++|+|.+++... ...+++..+..++.|+++||+||| +.+++||||||+||+++.++.+||+|||+++....
T Consensus 193 ~~~~g~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~ 265 (377)
T 3cbl_A 193 LVQGGDFLTFLRTE----GARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEAD 265 (377)
T ss_dssp CCTTCBHHHHHHHH----GGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECTT
T ss_pred cCCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCcCCcccCHHHEEEcCCCcEEECcCCCceecCC
Confidence 99999999999864 235789999999999999999999 78999999999999999999999999999986543
Q ss_pred CCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhhcc
Q 002063 832 SPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLD 910 (973)
Q Consensus 832 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (973)
...........++..|+|||++.+..++.++|||||||++|||++ |..||.... .......+. ...
T Consensus 266 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~--~~~~~~~~~----~~~------- 332 (377)
T 3cbl_A 266 GVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLS--NQQTREFVE----KGG------- 332 (377)
T ss_dssp SEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSC--HHHHHHHHH----TTC-------
T ss_pred CceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHH----cCC-------
Confidence 222111122345778999999998899999999999999999998 999997541 111111111 110
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002063 911 CEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 911 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
....+...+..+.+++.+||+.||++|||+.++++.|+++.
T Consensus 333 ---~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~ 373 (377)
T 3cbl_A 333 ---RLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373 (377)
T ss_dssp ---CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---CCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 00111123456889999999999999999999999998764
No 65
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5e-40 Score=362.14 Aligned_cols=254 Identities=22% Similarity=0.255 Sum_probs=209.6
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEcc
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
.++|++.+.||+|+||+||+|++..+++.||+|++... .....+.+|+++++.++||||+++++++.+.+..++||||+
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~ 83 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFI 83 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeC
Confidence 36789999999999999999999999999999988653 34556889999999999999999999999999999999999
Q ss_pred CCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecC--CCceEEecccCCccccC
Q 002063 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE--DYEPKIADFGVAKIAEN 831 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~--~~~~kl~Dfgl~~~~~~ 831 (973)
++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||++.....
T Consensus 84 ~g~~L~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH---~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~ 156 (321)
T 1tki_A 84 SGLDIFERINTS----AFELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP 156 (321)
T ss_dssp CCCBHHHHHTSS----SCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCT
T ss_pred CCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCC
Confidence 999999998642 345889999999999999999999 789999999999999987 78999999999987654
Q ss_pred CCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccc
Q 002063 832 SPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDC 911 (973)
Q Consensus 832 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (973)
... .....||+.|+|||++.+..++.++||||+||++|+|++|..||.... ..............
T Consensus 157 ~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-----~~~~~~~i~~~~~~------- 221 (321)
T 1tki_A 157 GDN---FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAET-----NQQIIENIMNAEYT------- 221 (321)
T ss_dssp TCE---EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHHHHTCCC-------
T ss_pred CCc---cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCC-----HHHHHHHHHcCCCC-------
Confidence 322 234568999999999998889999999999999999999999996531 11222211111110
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 912 EVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 912 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
............+.+++.+|++.||.+|||+.|+++|-.
T Consensus 222 -~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~ 260 (321)
T 1tki_A 222 -FDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPW 260 (321)
T ss_dssp -CCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHH
T ss_pred -CChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcChh
Confidence 011112233556889999999999999999999998654
No 66
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1.1e-39 Score=364.18 Aligned_cols=253 Identities=23% Similarity=0.264 Sum_probs=208.7
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc--------cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCee
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD--------GVKVFAAEMEILGKIRHRNILKLYACLLKGGSS 746 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~--------~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 746 (973)
.++|++.+.||+|+||+||+|+++.+|+.||||++.+.. ..+.+.+|++++++++||||+++++++.+++..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 457899999999999999999999999999999987632 356789999999999999999999999999999
Q ss_pred EEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCC----ceEEec
Q 002063 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDY----EPKIAD 822 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~----~~kl~D 822 (973)
|+||||+++|+|.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++ .+||+|
T Consensus 91 ~lv~e~~~gg~L~~~l~~-----~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~~~vkl~D 162 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQ-----KESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLID 162 (361)
T ss_dssp EEEEECCCSCBHHHHHTT-----CSCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECC
T ss_pred EEEEEcCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeCCCCCccCEEEEe
Confidence 999999999999999864 246899999999999999999999 78999999999999998877 799999
Q ss_pred ccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccc
Q 002063 823 FGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNH 902 (973)
Q Consensus 823 fgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~ 902 (973)
||++....... ......||+.|+|||++.+..++.++||||+||++|+|++|..||.... ............
T Consensus 163 FG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~-----~~~~~~~i~~~~ 234 (361)
T 2yab_A 163 FGLAHEIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT-----KQETLANITAVS 234 (361)
T ss_dssp CSSCEECCTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS-----HHHHHHHHHTTC
T ss_pred cCCceEcCCCC---ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhcC
Confidence 99998765432 2234579999999999999899999999999999999999999996531 111211111111
Q ss_pred ccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 903 ENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
. .............+.+++.+||+.||.+|||+.|+++|-.
T Consensus 235 ~--------~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 275 (361)
T 2yab_A 235 Y--------DFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275 (361)
T ss_dssp C--------CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTT
T ss_pred C--------CCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcCcC
Confidence 0 0111112233456889999999999999999999997643
No 67
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.5e-39 Score=357.37 Aligned_cols=262 Identities=21% Similarity=0.246 Sum_probs=206.0
Q ss_pred ccccccccccccCHHHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhc-CCCce
Q 002063 659 KWKLASFHHIDIDAEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKI-RHRNI 733 (973)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l-~hpni 733 (973)
.+....+++...+....++|++.++||+|+||+||+|++..+++.||||++... .....+.+|+..+.++ +||||
T Consensus 40 ~~~~~~~~p~~~~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~i 119 (311)
T 3p1a_A 40 TLQSPGYDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCC 119 (311)
T ss_dssp SCCCTTCCTTSSSCHHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTB
T ss_pred ccCCCCCCCCCccchhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcE
Confidence 344455666666666678899999999999999999999988999999987552 2233445566666555 89999
Q ss_pred eeEeEEEEeCCeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeec
Q 002063 734 LKLYACLLKGGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLD 813 (973)
Q Consensus 734 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~ 813 (973)
+++++++.+++..|+||||+ +++|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++
T Consensus 120 v~l~~~~~~~~~~~lv~e~~-~~~L~~~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~ 191 (311)
T 3p1a_A 120 VRLEQAWEEGGILYLQTELC-GPSLQQHCEAW----GASLPEAQVWGYLRDTLLALAHLH---SQGLVHLDVKPANIFLG 191 (311)
T ss_dssp CCEEEEEEETTEEEEEEECC-CCBHHHHHHHH----CSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEC
T ss_pred EEEEEEEEeCCEEEEEEecc-CCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEC
Confidence 99999999999999999999 77999998764 345899999999999999999999 67999999999999999
Q ss_pred CCCceEEecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHH
Q 002063 814 EDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVY 893 (973)
Q Consensus 814 ~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~ 893 (973)
.++.+||+|||++....... ......||+.|+|||++.+ .++.++|||||||++|||++|..|+.... .
T Consensus 192 ~~~~~kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~----~--- 260 (311)
T 3p1a_A 192 PRGRCKLGDFGLLVELGTAG---AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE----G--- 260 (311)
T ss_dssp GGGCEEECCCTTCEECC---------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH----H---
T ss_pred CCCCEEEccceeeeecccCC---CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc----H---
Confidence 99999999999988664332 2233568999999999876 78999999999999999999977664321 0
Q ss_pred HHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 894 WVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
+ .... ...............+.+++.+||++||++|||+.|++++-
T Consensus 261 ~-~~~~----------~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp 306 (311)
T 3p1a_A 261 W-QQLR----------QGYLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLALP 306 (311)
T ss_dssp H-HHHT----------TTCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSG
T ss_pred H-HHHh----------ccCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhCc
Confidence 1 0000 01111112223356788999999999999999999999864
No 68
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=5.2e-39 Score=352.75 Aligned_cols=265 Identities=35% Similarity=0.565 Sum_probs=214.4
Q ss_pred ccCeecccCcEEEEEEEEcCCCceEEEEEeecc------ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEcc
Q 002063 680 EDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG------DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 680 ~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~------~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
..+.||+|+||+||+|+.. ++.||||++... ...+.+.+|++++++++||||+++++++..++..++||||+
T Consensus 35 ~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 112 (307)
T 2nru_A 35 GGNKMGEGGFGVVYKGYVN--NTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYM 112 (307)
T ss_dssp TCCEEEECSSEEEEEEESS--SCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred cCCccccCCCeEEEEEEEC--CceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEEec
Confidence 3489999999999999874 789999988642 33567899999999999999999999999999999999999
Q ss_pred CCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCC
Q 002063 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~ 833 (973)
++|+|.+++.... ....+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||++.......
T Consensus 113 ~~~~L~~~l~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~ 187 (307)
T 2nru_A 113 PNGSLLDRLSCLD--GTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFA 187 (307)
T ss_dssp TTCBHHHHHHTGG--GCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCS
T ss_pred CCCcHHHHHHhcc--CCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecCCCCHHHEEEcCCCcEEEeeccccccccccc
Confidence 9999999997542 2346899999999999999999999 7899999999999999999999999999998765443
Q ss_pred CcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccc
Q 002063 834 KVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEV 913 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (973)
.........||+.|+|||++.+ .++.++||||||+++|+|++|+.||...... .....+..........+...++...
T Consensus 188 ~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (307)
T 2nru_A 188 QTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREP-QLLLDIKEEIEDEEKTIEDYIDKKM 265 (307)
T ss_dssp SCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSS-SBTTHHHHHHHTTSCCHHHHSCSSC
T ss_pred ccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcch-HHHHHHHHHhhhhhhhhhhhccccc
Confidence 3333334578999999998865 5889999999999999999999999764322 2222232222222332334444333
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002063 914 ASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 914 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
..........+.+++.+||+.||.+||++.+++++|+++.
T Consensus 266 -~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~ 305 (307)
T 2nru_A 266 -NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305 (307)
T ss_dssp -SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred -cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 2334566788999999999999999999999999999864
No 69
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.1e-39 Score=364.33 Aligned_cols=255 Identities=21% Similarity=0.207 Sum_probs=207.5
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-------ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-------DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSF 747 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-------~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 747 (973)
.++|++.+.||+|+||+||+|+++.+++.||||++... ...+.+.+|+++++.++||||+++++++.+++..|
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 35789999999999999999999999999999998642 24677899999999999999999999999999999
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCc---eEEeccc
Q 002063 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYE---PKIADFG 824 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~---~kl~Dfg 824 (973)
+||||+++|+|.+++..... ....+++..+..++.|+++||+||| +++|+||||||+||+++.++. +||+|||
T Consensus 103 lv~e~~~g~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg 178 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRAD-AGFVYSEAVASHYMRQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFG 178 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECSSSTTCCEEECCCT
T ss_pred EEEeCCCCCCHHHHHHHhcc-cCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChHHeEEecCCCCCcEEEecCc
Confidence 99999999999998876422 2345789999999999999999999 789999999999999987654 9999999
Q ss_pred CCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccccc
Q 002063 825 VAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHEN 904 (973)
Q Consensus 825 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 904 (973)
++........ ......||+.|+|||++.+..++.++||||+||++|||++|+.||.... ............
T Consensus 179 ~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~------~~~~~~i~~~~~- 249 (351)
T 3c0i_A 179 VAIQLGESGL--VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK------ERLFEGIIKGKY- 249 (351)
T ss_dssp TCEECCTTSC--BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH------HHHHHHHHHTCC-
T ss_pred ceeEecCCCe--eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH------HHHHHHHHcCCC-
Confidence 9987654322 1234579999999999999999999999999999999999999997531 111111111110
Q ss_pred chhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 905 VLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
.............+.+++.+||+.||++||++.|+++|
T Consensus 250 -------~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 250 -------KMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp -------CCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred -------CCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 00011112234568899999999999999999999875
No 70
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=2.4e-40 Score=366.39 Aligned_cols=256 Identities=24% Similarity=0.324 Sum_probs=202.0
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCce----EEEEEeec---cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGT----VAVKQLWK---GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSF 747 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~----vavK~~~~---~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 747 (973)
..+|++.+.||+|+||+||+|++..+++. ||+|.+.. ....+.+.+|++++++++||||+++++++..+. .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~ 92 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence 35789999999999999999998876665 57777654 245577899999999999999999999998764 78
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCc
Q 002063 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
+|+||+++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++
T Consensus 93 ~v~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 165 (327)
T 3poz_A 93 LITQLMPFGCLLDYVREH----KDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK 165 (327)
T ss_dssp EEEECCTTCBHHHHHHHS----TTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTHHH
T ss_pred EEEEecCCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCChheEEECCCCCEEEccCccee
Confidence 999999999999999864 345899999999999999999999 7799999999999999999999999999998
Q ss_pred cccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccch
Q 002063 828 IAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVL 906 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (973)
...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||.... .......+....
T Consensus 166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~--~~~~~~~~~~~~------- 236 (327)
T 3poz_A 166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP--ASEISSILEKGE------- 236 (327)
T ss_dssp HHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--GGGHHHHHHTTC-------
T ss_pred EccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCC--HHHHHHHHHcCC-------
Confidence 7765444333444567889999999999999999999999999999999 999997542 222222221111
Q ss_pred hhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002063 907 KVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
...........+.+++.+||+.||++||++.+++++|+.+.
T Consensus 237 -------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~ 277 (327)
T 3poz_A 237 -------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA 277 (327)
T ss_dssp -------CCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHH
T ss_pred -------CCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 00111223446888999999999999999999999998754
No 71
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.5e-40 Score=373.65 Aligned_cols=264 Identities=25% Similarity=0.300 Sum_probs=210.5
Q ss_pred HHhcCCcccCeecccCcEEEEEEEE-----cCCCceEEEEEeec---cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCC
Q 002063 673 EQICNLEEDNLIGSGGTGKVYRLDL-----KKNAGTVAVKQLWK---GDGVKVFAAEMEILGKIRHRNILKLYACLLKGG 744 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~Vy~a~~-----~~~~~~vavK~~~~---~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~ 744 (973)
....+|++.+.||+|+||+||+|++ ..+++.||||++.. .....++.+|+.++++++||||+++++++..+.
T Consensus 68 ~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~ 147 (367)
T 3l9p_A 68 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL 147 (367)
T ss_dssp CCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred cCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCC
Confidence 3356789999999999999999994 44677899999865 234456889999999999999999999999999
Q ss_pred eeEEEEEccCCCchHHHHHhhhc--CCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCC---ceE
Q 002063 745 SSFLVLEYMPNGNLFQALHKRVK--EGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDY---EPK 819 (973)
Q Consensus 745 ~~~lv~e~~~~gsL~~~l~~~~~--~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~---~~k 819 (973)
..++||||+++|+|.+++..... .....+++..+..++.|+++||+||| +++|+||||||+||+++.++ .+|
T Consensus 148 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~k 224 (367)
T 3l9p_A 148 PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAK 224 (367)
T ss_dssp SCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEE
T ss_pred CCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEEecCCCCceEE
Confidence 99999999999999999987532 12345899999999999999999999 78999999999999999555 599
Q ss_pred EecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHh
Q 002063 820 IADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTH 898 (973)
Q Consensus 820 l~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~ 898 (973)
|+|||+++...............||+.|+|||++.+..++.++|||||||++|||++ |+.||.... ........
T Consensus 225 L~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~-----~~~~~~~i 299 (367)
T 3l9p_A 225 IGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-----NQEVLEFV 299 (367)
T ss_dssp ECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-----HHHHHHHH
T ss_pred ECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHH
Confidence 999999986543333333344568999999999999999999999999999999998 999996541 11111111
Q ss_pred hcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002063 899 LNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
..... ..........+.+++.+||+.||++||++.+|+++|+.+..
T Consensus 300 ~~~~~-----------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~ 345 (367)
T 3l9p_A 300 TSGGR-----------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 345 (367)
T ss_dssp HTTCC-----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HcCCC-----------CCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhh
Confidence 11110 01112234468899999999999999999999999987643
No 72
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.9e-39 Score=354.61 Aligned_cols=265 Identities=15% Similarity=0.133 Sum_probs=214.7
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHhc-CCCceeeEeEEEEeCCeeEEEEEcc
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
.++|++.+.||+|+||+||+|++..+++.||||++......+.+.+|+++++++ +|++++++++++..+...++||||+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 88 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL 88 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec
Confidence 357899999999999999999999889999999987766666788999999999 8999999999999999999999999
Q ss_pred CCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCc-----eEEecccCCcc
Q 002063 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYE-----PKIADFGVAKI 828 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~-----~kl~Dfgl~~~ 828 (973)
+++|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++. +||+|||+++.
T Consensus 89 -~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~ 160 (298)
T 1csn_A 89 -GPSLEDLLDLC----GRKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF 160 (298)
T ss_dssp -CCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEE
T ss_pred -CCCHHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccc
Confidence 99999999864 235899999999999999999999 889999999999999987776 99999999987
Q ss_pred ccCCCCc-----ccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccc
Q 002063 829 AENSPKV-----SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHE 903 (973)
Q Consensus 829 ~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 903 (973)
....... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..............
T Consensus 161 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~--~~~~~~~~~~~~~~ 238 (298)
T 1csn_A 161 YRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAA--TNKQKYERIGEKKQ 238 (298)
T ss_dssp SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSC--CHHHHHHHHHHHHH
T ss_pred cccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhcc--ccHHHHHHHHhhcc
Confidence 7543221 1223457999999999999999999999999999999999999999764221 11111111110000
Q ss_pred cchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCC
Q 002063 904 NVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPC 956 (973)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~ 956 (973)
. .............+.+++.+||+.||++||++.+|++.|+++...
T Consensus 239 ~-------~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~ 284 (298)
T 1csn_A 239 S-------TPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER 284 (298)
T ss_dssp H-------SCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred C-------ccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHh
Confidence 0 000001112345688999999999999999999999999987543
No 73
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=1.4e-39 Score=349.84 Aligned_cols=258 Identities=25% Similarity=0.342 Sum_probs=210.4
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEcc
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
.++|++.+.||+|+||+||+|++.. +..||||++... ...+++.+|++++++++||||+++++++..+...++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKG-QYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI 85 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETT-TEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhheeeeeeeccCCCceEEEEEecC-ceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence 4578999999999999999998875 678999998763 35677899999999999999999999999999999999999
Q ss_pred CCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCC
Q 002063 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~ 833 (973)
++++|.+++... ...+++..+..++.|++.|++||| +.+++||||||+||+++.++.+||+|||.+.......
T Consensus 86 ~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 158 (268)
T 3sxs_A 86 SNGCLLNYLRSH----GKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ 158 (268)
T ss_dssp TTCBHHHHHHHH----GGGCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTC
T ss_pred CCCcHHHHHHHc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCcceEEECCCCCEEEccCccceecchhh
Confidence 999999999764 235889999999999999999999 7899999999999999999999999999998665433
Q ss_pred CcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhhcccc
Q 002063 834 KVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCE 912 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
.. ......+|+.|+|||++.+..++.++||||+|+++|||++ |+.||.... ............. ...
T Consensus 159 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-----~~~~~~~~~~~~~----~~~-- 226 (268)
T 3sxs_A 159 YV-SSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYT-----NSEVVLKVSQGHR----LYR-- 226 (268)
T ss_dssp EE-ECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSC-----HHHHHHHHHTTCC----CCC--
T ss_pred hh-cccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccC-----hHHHHHHHHcCCC----CCC--
Confidence 22 2233456778999999998899999999999999999999 999996541 1111111111110 000
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCCC
Q 002063 913 VASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPCT 957 (973)
Q Consensus 913 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~ 957 (973)
+......+.+++.+||+.||++|||+.+++++|+.+....
T Consensus 227 -----~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~~ 266 (268)
T 3sxs_A 227 -----PHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREKD 266 (268)
T ss_dssp -----CTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC--
T ss_pred -----CCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhcc
Confidence 1112345888999999999999999999999999987543
No 74
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=362.90 Aligned_cols=251 Identities=29% Similarity=0.369 Sum_probs=202.6
Q ss_pred HHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhc-CCCceeeEeEEEEeCCee
Q 002063 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSS 746 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~ 746 (973)
..+++|++.+.||+|+||+||+|+++.+++.||||++.+. ...+.+.+|.++++.+ +||||+++++++..++..
T Consensus 20 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~ 99 (353)
T 3txo_A 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRL 99 (353)
T ss_dssp ---CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred CchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEE
Confidence 4467899999999999999999999999999999998753 3456678899999988 799999999999999999
Q ss_pred EEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCC
Q 002063 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVA 826 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~ 826 (973)
|+||||+++|+|.+++... ..+++..+..++.|++.||+||| +++|+||||||+|||++.++.+||+|||++
T Consensus 100 ~lv~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NILl~~~g~ikL~DFG~a 171 (353)
T 3txo_A 100 FFVMEFVNGGDLMFHIQKS-----RRFDEARARFYAAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMC 171 (353)
T ss_dssp EEEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred EEEEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCCHHHEEECCCCCEEEccccce
Confidence 9999999999999999764 35889999999999999999999 789999999999999999999999999999
Q ss_pred ccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccch
Q 002063 827 KIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVL 906 (973)
Q Consensus 827 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (973)
+...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||... +...............
T Consensus 172 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~-----~~~~~~~~i~~~~~~~- 243 (353)
T 3txo_A 172 KEGICNG--VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAE-----NEDDLFEAILNDEVVY- 243 (353)
T ss_dssp BCSCC-----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHCCCCC-
T ss_pred eecccCC--ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCC-----CHHHHHHHHHcCCCCC-
Confidence 7543221 2233457999999999999989999999999999999999999999654 1122222222111110
Q ss_pred hhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCH------HHHHHHh
Q 002063 907 KVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPM------REVVKML 950 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~------~evl~~L 950 (973)
+......+.+++.+|++.||.+||++ .|+++|-
T Consensus 244 -----------p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp 282 (353)
T 3txo_A 244 -----------PTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHP 282 (353)
T ss_dssp -----------CTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSG
T ss_pred -----------CCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCC
Confidence 11123457889999999999999998 7787653
No 75
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=3.1e-40 Score=371.10 Aligned_cols=262 Identities=28% Similarity=0.366 Sum_probs=209.1
Q ss_pred hcCCcccCeecccCcEEEEEEE-----EcCCCceEEEEEeeccc---cHHHHHHHHHHHHhc-CCCceeeEeEEEEeCC-
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLD-----LKKNAGTVAVKQLWKGD---GVKVFAAEMEILGKI-RHRNILKLYACLLKGG- 744 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~-----~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~- 744 (973)
.++|++.+.||+|+||.||+|+ ...+++.||||++.... ..+.+.+|+++++++ +||||+++++++.+++
T Consensus 21 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 100 (359)
T 3vhe_A 21 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 100 (359)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS
T ss_pred ccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCC
Confidence 4678999999999999999999 44567899999987632 345689999999999 7999999999998755
Q ss_pred eeEEEEEccCCCchHHHHHhhhcCC-------------------------------------------------------
Q 002063 745 SSFLVLEYMPNGNLFQALHKRVKEG------------------------------------------------------- 769 (973)
Q Consensus 745 ~~~lv~e~~~~gsL~~~l~~~~~~~------------------------------------------------------- 769 (973)
..++||||+++|+|.+++.......
T Consensus 101 ~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (359)
T 3vhe_A 101 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 180 (359)
T ss_dssp CCEEEEECCTTEEHHHHHHTTTTSBCSCC---------------------------------------------------
T ss_pred ceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcc
Confidence 4899999999999999998642110
Q ss_pred ------CCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCcccccccCc
Q 002063 770 ------KPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKVSDYSCFAG 843 (973)
Q Consensus 770 ------~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~g 843 (973)
...+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++...............|
T Consensus 181 ~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~ 257 (359)
T 3vhe_A 181 APEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 257 (359)
T ss_dssp ---CTTTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEE
T ss_pred cccchhccccCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCC
Confidence 122889999999999999999999 78999999999999999999999999999987654433333445668
Q ss_pred ccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhhccccccChhhHHHH
Q 002063 844 THGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDM 922 (973)
Q Consensus 844 t~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (973)
|+.|+|||++.+..++.++|||||||++|||++ |+.||...... ......+.... . ...+....
T Consensus 258 t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-~~~~~~~~~~~--~------------~~~~~~~~ 322 (359)
T 3vhe_A 258 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRRLKEGT--R------------MRAPDYTT 322 (359)
T ss_dssp CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS-HHHHHHHHHTC--C------------CCCCTTCC
T ss_pred CceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchh-HHHHHHHHcCC--C------------CCCCCCCC
Confidence 899999999999999999999999999999998 99999754221 11111111110 0 00111223
Q ss_pred HHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002063 923 IKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 923 ~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
..+.+++.+||+.||.+||++.|++++|+++.
T Consensus 323 ~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~ 354 (359)
T 3vhe_A 323 PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 354 (359)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence 46889999999999999999999999998764
No 76
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=5.4e-39 Score=370.51 Aligned_cols=368 Identities=18% Similarity=0.195 Sum_probs=291.0
Q ss_pred CcccCccCccccCCCCCcEEEecCCcccCCCCCcCCCCCCCEEeccCcccCCccccccccccccceEEccCCcCCCCCCc
Q 002063 107 NVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIP 186 (973)
Q Consensus 107 n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip 186 (973)
....+..+..++++++|++|++++|.+.+. |.++.+++|++|+|++|++++. | ++.+++|++|++++|.++.. |
T Consensus 28 ~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~-~~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~--~ 101 (457)
T 3bz5_A 28 FEMQATDTISEEQLATLTSLDCHNSSITDM-TGIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL--D 101 (457)
T ss_dssp TTCCTTSEEEHHHHTTCCEEECCSSCCCCC-TTGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC--C
T ss_pred cCcCcccccChhHcCCCCEEEccCCCcccC-hhhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee--e
Confidence 344455566899999999999999999986 4799999999999999999974 3 88899999999999998753 3
Q ss_pred ccccCCCCCCEEEcccccCCCCCChhhhccCCCCeeeccccccccccchhhhccccccEEEeecccCCCCCCcccccccc
Q 002063 187 ESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTL 266 (973)
Q Consensus 187 ~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~ 266 (973)
++++++|++|++++|++++ +| ++.+++|++|++++|++++. + ++.+++|++|++++|...+.+ .+..+++
T Consensus 102 --~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~ 171 (457)
T 3bz5_A 102 --VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQ 171 (457)
T ss_dssp --CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTT
T ss_pred --cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCc
Confidence 7889999999999999986 44 88889999999999999863 3 788888999999888655555 4778888
Q ss_pred ccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCccccceeeccccccCCCCCcccccccccccccccc
Q 002063 267 LQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISE 346 (973)
Q Consensus 267 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~ 346 (973)
|++|++++|++++ +| +..+++|+.|++++|++++. .++.+++|+.|++++|++++ +| ++.+++|+.|++++
T Consensus 172 L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~ 242 (457)
T 3bz5_A 172 LTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSV 242 (457)
T ss_dssp CCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCS
T ss_pred CCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeC
Confidence 8889998888885 44 77888888888888888864 37778888888888888886 45 77778888888888
Q ss_pred ccccccCChhhhhhhhHHHHHhhhccCCCCCCCcccCccccceEecccccccccCCccccCCCCcceEeccCCcCCCCCC
Q 002063 347 NQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGIS 426 (973)
Q Consensus 347 N~l~~~~p~~~~~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 426 (973)
|++++. | ++.+++|+.|++++|+ |+.|++++|.+.+..+
T Consensus 243 N~l~~~-------------------------~--~~~l~~L~~L~l~~n~--------------L~~L~l~~n~~~~~~~ 281 (457)
T 3bz5_A 243 NPLTEL-------------------------D--VSTLSKLTTLHCIQTD--------------LLEIDLTHNTQLIYFQ 281 (457)
T ss_dssp SCCSCC-------------------------C--CTTCTTCCEEECTTCC--------------CSCCCCTTCTTCCEEE
T ss_pred CcCCCc-------------------------C--HHHCCCCCEEeccCCC--------------CCEEECCCCccCCccc
Confidence 887732 1 2345677777777664 4566777777666554
Q ss_pred CccCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEecCCCcCCCCccccccccccCCEEEccCcccccCCCccccCccc
Q 002063 427 PLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCAR 506 (973)
Q Consensus 427 ~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 506 (973)
++.+++|+.|+|++|.+.+.+|. ..++|+.|++++| ++|++|+|++|++++. + ++++++
T Consensus 282 --~~~l~~L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~~-------------~~L~~L~L~~N~l~~l-~--l~~l~~ 340 (457)
T 3bz5_A 282 --AEGCRKIKELDVTHNTQLYLLDC---QAAGITELDLSQN-------------PKLVYLYLNNTELTEL-D--VSHNTK 340 (457)
T ss_dssp --CTTCTTCCCCCCTTCTTCCEEEC---TTCCCSCCCCTTC-------------TTCCEEECTTCCCSCC-C--CTTCTT
T ss_pred --ccccccCCEEECCCCcccceecc---CCCcceEechhhc-------------ccCCEEECCCCccccc-c--cccCCc
Confidence 45677888888888877766663 3455666666555 6899999999999984 3 899999
Q ss_pred cchhhccccccccCCCccccccCCCCeeecCCCccCCCCCchhhcc-cCceEEccCCccccccCccccc
Q 002063 507 IVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKL-KLSSIDLSENQLSGSVPLDFLR 574 (973)
Q Consensus 507 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l-~L~~l~ls~N~l~~~~p~~~~~ 574 (973)
|+.|++++|+|++ ++.|..|++++|+++|. + .+ .+..+++++|+++|.+|..+..
T Consensus 341 L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~-~----~~~~l~~l~l~~N~l~g~ip~~~~~ 396 (457)
T 3bz5_A 341 LKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE-G----QTITMPKETLTNNSLTIAVSPDLLD 396 (457)
T ss_dssp CSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE-E----EEEECCCBCCBTTBEEEECCTTCBC
T ss_pred CcEEECCCCCCCC--------ccccccccccCCcEEec-c----eeeecCccccccCcEEEEcChhHhc
Confidence 9999999999986 35678889999999976 2 23 3888999999999999986543
No 77
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=7e-40 Score=352.26 Aligned_cols=254 Identities=26% Similarity=0.362 Sum_probs=208.7
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccC
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMP 754 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 754 (973)
++|++.+.||+|+||+||+|++.. ++.||||++... ...+++.+|++++++++||||+++++++.+++..++||||++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 88 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLN-KDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME 88 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETT-TEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hhceeeheecCCCccEEEEEEecC-CCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCC
Confidence 578899999999999999999875 778999998763 356778999999999999999999999999999999999999
Q ss_pred CCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCC
Q 002063 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPK 834 (973)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~ 834 (973)
+|+|.+++... ...+++..+..++.|+++|++||| +.+++||||||+||+++.++.+||+|||++........
T Consensus 89 ~~~L~~~l~~~----~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 161 (269)
T 4hcu_A 89 HGCLSDYLRTQ----RGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 161 (269)
T ss_dssp TCBHHHHHHTT----TTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHH
T ss_pred CCcHHHHHHhc----CcccCHHHHHHHHHHHHHHHHHHH---hCCeecCCcchheEEEcCCCCEEecccccccccccccc
Confidence 99999999753 345889999999999999999999 78999999999999999999999999999986543211
Q ss_pred cccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhhccccc
Q 002063 835 VSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEV 913 (973)
Q Consensus 835 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (973)
.......+|+.|+|||++.+..++.++||||+|+++|||++ |+.||.... .............
T Consensus 162 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~-----~~~~~~~~~~~~~---------- 225 (269)
T 4hcu_A 162 -TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS-----NSEVVEDISTGFR---------- 225 (269)
T ss_dssp -HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-----HHHHHHHHHTTCC----------
T ss_pred -ccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCC-----HHHHHHHHhcCcc----------
Confidence 12223456788999999998999999999999999999999 999997531 1112111111100
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002063 914 ASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 914 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
...+......+.+++.+||+.||++||++.+++++|+++.
T Consensus 226 -~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~ 265 (269)
T 4hcu_A 226 -LYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIA 265 (269)
T ss_dssp -CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -CCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHH
Confidence 0011112345889999999999999999999999998764
No 78
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=3.1e-39 Score=363.60 Aligned_cols=255 Identities=23% Similarity=0.343 Sum_probs=205.0
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhc-CCCceeeEeEEEEeCCeeE
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSF 747 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~ 747 (973)
...+|++.+.||+|+||+||+|+++.+++.||||++.+. ...+.+.+|..+++++ +||||+++++++.+++..|
T Consensus 50 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 129 (396)
T 4dc2_A 50 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF 129 (396)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEE
Confidence 356889999999999999999999999999999998763 2334578899999887 8999999999999999999
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCc
Q 002063 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
+||||+++|+|.+++... ..+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++
T Consensus 130 lV~E~~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFGla~ 201 (396)
T 4dc2_A 130 FVIEYVNGGDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK 201 (396)
T ss_dssp EEEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred EEEEcCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEECCCCCEEEeecceee
Confidence 999999999999999864 35889999999999999999999 7899999999999999999999999999997
Q ss_pred cccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCC----ccHHHHHHHhhcccc
Q 002063 828 IAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDG----KDIVYWVSTHLNNHE 903 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~----~~~~~~~~~~~~~~~ 903 (973)
...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||....... ...............
T Consensus 202 ~~~~~~--~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~ 279 (396)
T 4dc2_A 202 EGLRPG--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI 279 (396)
T ss_dssp CCCCTT--CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCC
T ss_pred ecccCC--CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcccc
Confidence 532221 22334679999999999999999999999999999999999999996432111 111111111111111
Q ss_pred cchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCH------HHHHHHh
Q 002063 904 NVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPM------REVVKML 950 (973)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~------~evl~~L 950 (973)
. .+......+.+++.+||+.||.+||++ .|+++|-
T Consensus 280 ~------------~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hp 320 (396)
T 4dc2_A 280 R------------IPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHP 320 (396)
T ss_dssp C------------CCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHST
T ss_pred C------------CCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCc
Confidence 0 111234567899999999999999985 6777653
No 79
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.2e-40 Score=363.60 Aligned_cols=263 Identities=28% Similarity=0.369 Sum_probs=204.6
Q ss_pred hcCCcccCeecccCcEEEEEEE----EcCCCceEEEEEeecc--ccHHHHHHHHHHHHhcCCCceeeEeEEEEe--CCee
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLD----LKKNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRHRNILKLYACLLK--GGSS 746 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~----~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~--~~~~ 746 (973)
..+|++.+.||+|+||+||+|+ ...+++.||||++... ...+.+.+|++++++++||||+++++++.. ....
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 4578999999999999999999 4567899999998753 344678899999999999999999999865 3568
Q ss_pred EEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCC
Q 002063 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVA 826 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~ 826 (973)
++||||+++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 89 ~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~ 161 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKH----KERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLT 161 (295)
T ss_dssp EEEEECCTTCBHHHHHHHC----GGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCSC
T ss_pred EEEEEeCCCCCHHHHHHhc----ccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHhhEEEcCCCeEEEccCccc
Confidence 9999999999999999864 235889999999999999999999 789999999999999999999999999999
Q ss_pred ccccCCCCc-ccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCC----------CccHHHHH
Q 002063 827 KIAENSPKV-SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGD----------GKDIVYWV 895 (973)
Q Consensus 827 ~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~----------~~~~~~~~ 895 (973)
+........ .......++..|+|||++.+..++.++||||+|+++|||++|..||.....+ ........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (295)
T 3ugc_A 162 KVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 241 (295)
T ss_dssp C-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHH
T ss_pred ccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHH
Confidence 876543221 1222345778899999999999999999999999999999999998653110 00000001
Q ss_pred HHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002063 896 STHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
.... ........+......+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 242 ~~~~----------~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~ 290 (295)
T 3ugc_A 242 IELL----------KNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 290 (295)
T ss_dssp HHHH----------HTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHH----------hccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 1111 011111112234467889999999999999999999999998764
No 80
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=1.8e-39 Score=360.10 Aligned_cols=260 Identities=17% Similarity=0.154 Sum_probs=210.9
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHhc-CCCceeeEeEEEEeCCeeEEEEEccC
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSFLVLEYMP 754 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~~~ 754 (973)
.+|++.+.||+|+||+||+|++..+++.||||++......+.+.+|+++++++ +||||+++++++..++..++||||+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~- 87 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL- 87 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-
Confidence 57899999999999999999999999999999988766666789999999999 9999999999999999999999999
Q ss_pred CCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCc-----eEEecccCCccc
Q 002063 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYE-----PKIADFGVAKIA 829 (973)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~-----~kl~Dfgl~~~~ 829 (973)
+++|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++. +||+|||+++..
T Consensus 88 ~~~L~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH---~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~ 160 (330)
T 2izr_A 88 GPSLEDLFDLC----DRTFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEY 160 (330)
T ss_dssp CCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEES
T ss_pred CCCHHHHHHHc----CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceee
Confidence 99999999863 346899999999999999999999 789999999999999998887 999999999876
Q ss_pred cCCCCcc-----cccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccccc
Q 002063 830 ENSPKVS-----DYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHEN 904 (973)
Q Consensus 830 ~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 904 (973)
....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..+..............
T Consensus 161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~--~~~~~~~~~~i~~~~~~ 238 (330)
T 2izr_A 161 IDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLK--ADTLKERYQKIGDTKRA 238 (330)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC--CSSHHHHHHHHHHHHHH
T ss_pred ecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccc--cccHHHHHHHHHhhhcc
Confidence 4432211 1234679999999999999999999999999999999999999998652 22222222111110000
Q ss_pred chhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcC
Q 002063 905 VLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADA 953 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 953 (973)
. ... ......+ .+.+++..||+.||.+||++.+|.+.|+++
T Consensus 239 ~----~~~---~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~ 279 (330)
T 2izr_A 239 T----PIE---VLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDL 279 (330)
T ss_dssp S----CHH---HHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred C----CHH---HHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHH
Confidence 0 000 0000112 688999999999999999999999998754
No 81
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=3.6e-39 Score=369.55 Aligned_cols=255 Identities=21% Similarity=0.251 Sum_probs=207.1
Q ss_pred HHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEE
Q 002063 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
...++|++.+.||+|+||+||+|.+..+++.||+|++... ...+.+.+|++++++++||||+++++++.+++..|+
T Consensus 8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 87 (444)
T 3soa_A 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYL 87 (444)
T ss_dssp HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEE
T ss_pred cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEE
Confidence 3456799999999999999999999999999999998763 244568899999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeec---CCCceEEecccC
Q 002063 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLD---EDYEPKIADFGV 825 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~---~~~~~kl~Dfgl 825 (973)
||||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++ .++.+||+|||+
T Consensus 88 v~E~~~gg~L~~~i~~~-----~~~~e~~~~~i~~qil~aL~~lH---~~givHrDlKp~NIll~~~~~~~~vkL~DFG~ 159 (444)
T 3soa_A 88 IFDLVTGGELFEDIVAR-----EYYSEADASHCIQQILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGL 159 (444)
T ss_dssp EECCCBCCBHHHHHHHC-----SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSSTTEEESBSSTTCCEEECCCSS
T ss_pred EEEeCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEeccCCCCcEEEccCce
Confidence 99999999999999753 35889999999999999999999 78999999999999998 467899999999
Q ss_pred CccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccc
Q 002063 826 AKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENV 905 (973)
Q Consensus 826 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 905 (973)
+........ ......||+.|+|||++.+..++.++||||+||++|+|++|+.||.... ..............
T Consensus 160 a~~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~-----~~~~~~~i~~~~~~- 231 (444)
T 3soa_A 160 AIEVEGEQQ--AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDED-----QHRLYQQIKAGAYD- 231 (444)
T ss_dssp CBCCCTTCC--BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHTCCC-
T ss_pred eEEecCCCc--eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCcc-----HHHHHHHHHhCCCC-
Confidence 986654322 2234579999999999999899999999999999999999999996531 11111111111100
Q ss_pred hhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 906 LKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
............+.+++.+||+.||.+|||+.|+++|-
T Consensus 232 -------~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp 269 (444)
T 3soa_A 232 -------FPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHP 269 (444)
T ss_dssp -------CCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSC
T ss_pred -------CCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcCc
Confidence 00111122345688999999999999999999999874
No 82
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=6e-39 Score=352.41 Aligned_cols=246 Identities=26% Similarity=0.339 Sum_probs=206.9
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 749 (973)
.++|++.+.||+|+||+||+|+...+++.||||++.+. ...+.+.+|+.+++.++||||+++++++.++...|+|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 46789999999999999999999999999999998763 3456788999999999999999999999999999999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccc
Q 002063 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
|||+++|+|.+++... ..+++..+..++.|++.||+||| +++|+||||||+||+++.+|.+||+|||+++..
T Consensus 85 ~e~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~ 156 (318)
T 1fot_A 85 MDYIEGGELFSLLRKS-----QRFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYV 156 (318)
T ss_dssp ECCCCSCBHHHHHHHT-----SSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEEC
T ss_pred EeCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChheEEEcCCCCEEEeecCcceec
Confidence 9999999999999753 35789999999999999999999 889999999999999999999999999999865
Q ss_pred cCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhc
Q 002063 830 ENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVL 909 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
... .....||+.|+|||++.+..++.++||||+||++|||++|+.||... +..............
T Consensus 157 ~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~-----~~~~~~~~i~~~~~~----- 221 (318)
T 1fot_A 157 PDV-----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDS-----NTMKTYEKILNAELR----- 221 (318)
T ss_dssp SSC-----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCS-----SHHHHHHHHHHCCCC-----
T ss_pred CCc-----cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCC-----CHHHHHHHHHhCCCC-----
Confidence 432 22357899999999999999999999999999999999999999653 111222221111110
Q ss_pred cccccChhhHHHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHHh
Q 002063 910 DCEVASESIKEDMIKLLKIAVVCTTKLPNLRP-----PMREVVKML 950 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----t~~evl~~L 950 (973)
.+......+.+++.+|++.||.+|| ++.|+++|-
T Consensus 222 -------~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp 260 (318)
T 1fot_A 222 -------FPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHP 260 (318)
T ss_dssp -------CCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSG
T ss_pred -------CCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCc
Confidence 0112234678899999999999999 899998763
No 83
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.2e-39 Score=360.06 Aligned_cols=250 Identities=26% Similarity=0.339 Sum_probs=206.3
Q ss_pred HHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeE
Q 002063 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSF 747 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 747 (973)
..+++|++.+.||+|+||+||+|++..+++.||||++... .....+.+|+++++.++||||+++++++..++..+
T Consensus 6 ~~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 85 (336)
T 3h4j_B 6 RHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIV 85 (336)
T ss_dssp SEETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEE
Confidence 3457899999999999999999999999999999998652 33457889999999999999999999999999999
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCc
Q 002063 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
+||||+ +|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.
T Consensus 86 lv~E~~-~g~l~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~DFG~s~ 156 (336)
T 3h4j_B 86 MVIEYA-GGELFDYIVEK-----KRMTEDEGRRFFQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSN 156 (336)
T ss_dssp EEECCC-CEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCSTTTEEECTTCCEEECCSSCTB
T ss_pred EEEECC-CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCchhhEEEcCCCCEEEEEeccce
Confidence 999999 78999998754 35889999999999999999999 6799999999999999999999999999998
Q ss_pred cccCCCCcccccccCcccccccccccccCCC-CccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccch
Q 002063 828 IAENSPKVSDYSCFAGTHGYIAPELAYTCKV-SEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVL 906 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (973)
...... ......||+.|+|||++.+..+ ++++||||+||++|+|++|+.||........ ..
T Consensus 157 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~---------------~~ 218 (336)
T 3h4j_B 157 IMTDGN---FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL---------------FK 218 (336)
T ss_dssp TTTTSB---TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC---------------BC
T ss_pred eccCCc---ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH---------------HH
Confidence 664432 2233569999999999988776 6899999999999999999999976421100 00
Q ss_pred hhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 907 KVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
.+..... ..+......+.+++.+|++.||.+|||+.|++++-.
T Consensus 219 ~i~~~~~--~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~ 261 (336)
T 3h4j_B 219 KVNSCVY--VMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPW 261 (336)
T ss_dssp CCCSSCC--CCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCHH
T ss_pred HHHcCCC--CCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhChh
Confidence 0100000 111223456789999999999999999999998654
No 84
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.3e-39 Score=356.81 Aligned_cols=253 Identities=23% Similarity=0.276 Sum_probs=208.0
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc--------cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCee
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD--------GVKVFAAEMEILGKIRHRNILKLYACLLKGGSS 746 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~--------~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 746 (973)
.++|++.+.||+|+||+||+|++..+++.||||++.... ..+.+.+|++++++++||||+++++++..+...
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 356899999999999999999999999999999987521 357789999999999999999999999999999
Q ss_pred EEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCC----ceEEec
Q 002063 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDY----EPKIAD 822 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~----~~kl~D 822 (973)
++||||+++|+|.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++ .+||+|
T Consensus 90 ~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~D 161 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAE-----KESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIID 161 (326)
T ss_dssp EEEEECCCSCBHHHHHTT-----SSCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCSSSSSCCEEECC
T ss_pred EEEEEcCCCCCHHHHHHh-----cCCcCHHHHHHHHHHHHHHHHHHH---HCCeEcCCCCHHHEEEecCCCCCCCEEEEE
Confidence 999999999999999864 245889999999999999999999 78999999999999999887 799999
Q ss_pred ccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccc
Q 002063 823 FGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNH 902 (973)
Q Consensus 823 fgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~ 902 (973)
||+++...... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||.... ............
T Consensus 162 fg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-----~~~~~~~~~~~~ 233 (326)
T 2y0a_A 162 FGLAHKIDFGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT-----KQETLANVSAVN 233 (326)
T ss_dssp CTTCEECCTTS---CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS-----HHHHHHHHHHTC
T ss_pred CCCCeECCCCC---ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCC-----HHHHHHHHHhcC
Confidence 99998765332 2233568999999999998899999999999999999999999996531 111111111111
Q ss_pred ccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 903 ENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
. .............+.+++.+||+.||++|||+.|+++|-.
T Consensus 234 ~--------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~ 274 (326)
T 2y0a_A 234 Y--------EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPW 274 (326)
T ss_dssp C--------CCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTT
T ss_pred C--------CcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 0 0111111223456889999999999999999999998643
No 85
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=4.4e-38 Score=366.08 Aligned_cols=346 Identities=25% Similarity=0.347 Sum_probs=172.8
Q ss_pred CCCCCcEEeCCCCcccCccCccccCCCCCcEEEecCCcccCCCCCcCCCCCCCEEeccCcccCCccccccccccccceEE
Q 002063 95 ALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLS 174 (973)
Q Consensus 95 ~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 174 (973)
.+++|++|+++++.+.. +| .+..+++|++|+|++|.+.+.++ ++++++|++|++++|.+++..+ +.++++|++|+
T Consensus 44 ~l~~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~ 118 (466)
T 1o6v_A 44 DLDQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP-LKNLTKLVDILMNNNQIADITP--LANLTNLTGLT 118 (466)
T ss_dssp HHHTCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred HhccccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCchh-hhccccCCEEECCCCccccChh--hcCCCCCCEEE
Confidence 34556666666665552 33 35556666666666666655544 5566666666666666654333 55555555555
Q ss_pred ccCCcCCCCCCcccccCCCCCCEEEcccccCCCCCChhhhccCCCCeeeccccccccccchhhhccccccEEEeecccCC
Q 002063 175 IGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLT 254 (973)
Q Consensus 175 l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~ 254 (973)
+++|.++. ++. +.++++|++|++++|.+++ ++ .+..+++|++|+++ |.+.+.. .+.++++|++|++++|.++
T Consensus 119 L~~n~l~~--~~~-~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~ 190 (466)
T 1o6v_A 119 LFNNQITD--IDP-LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKVS 190 (466)
T ss_dssp CCSSCCCC--CGG-GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCCC
T ss_pred CCCCCCCC--ChH-HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcCC
Confidence 55555542 222 5555555555555555553 22 25555555555554 3333221 2555555555555555555
Q ss_pred CCCCccccccccccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCccccceeeccccccCCCCCcccc
Q 002063 255 GELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLG 334 (973)
Q Consensus 255 ~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~ 334 (973)
+. ..+..+++|++|++++|.+.+..| ++.+++|+.|++++|++.+. ..+..+++|+.|++++|.+++..+ +.
T Consensus 191 ~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~ 262 (466)
T 1o6v_A 191 DI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LS 262 (466)
T ss_dssp CC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GT
T ss_pred CC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hh
Confidence 32 224455555555555555543333 44455555555555555432 234444455555555555443322 44
Q ss_pred ccccccccccccccccccCChhhhhhhhHHHHHhhhccCCCCCCCcccCccccceEecccccccccCCccccCCCCcceE
Q 002063 335 RYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGML 414 (973)
Q Consensus 335 ~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 414 (973)
.+++|+.|++++|.+++. +. +..+++|++|+|++|++++..+ +..+++|+.|
T Consensus 263 ~l~~L~~L~l~~n~l~~~-------------------------~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L 314 (466)
T 1o6v_A 263 GLTKLTELKLGANQISNI-------------------------SP-LAGLTALTNLELNENQLEDISP--ISNLKNLTYL 314 (466)
T ss_dssp TCTTCSEEECCSSCCCCC-------------------------GG-GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEE
T ss_pred cCCCCCEEECCCCccCcc-------------------------cc-ccCCCccCeEEcCCCcccCchh--hcCCCCCCEE
Confidence 445555555555554421 11 3344455555555555543322 4444555555
Q ss_pred eccCCcCCCCCCCccCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEecCCCcCCCCccccccccccCCEEEccCcccc
Q 002063 415 DFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALT 494 (973)
Q Consensus 415 ~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 494 (973)
++++|++++..+ +..+++|+.|++++|++++. ..+..+++|+.|++++|++++..| +..+++|+.|++++|+++
T Consensus 315 ~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~ 388 (466)
T 1o6v_A 315 TLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWT 388 (466)
T ss_dssp ECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEE
T ss_pred ECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCccc
Confidence 555555444433 34445555555555555432 344555555555555555554444 455555555555555555
Q ss_pred c
Q 002063 495 G 495 (973)
Q Consensus 495 ~ 495 (973)
+
T Consensus 389 ~ 389 (466)
T 1o6v_A 389 N 389 (466)
T ss_dssp C
T ss_pred C
Confidence 3
No 86
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=4.4e-39 Score=361.18 Aligned_cols=250 Identities=24% Similarity=0.316 Sum_probs=206.4
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEE
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
..++|++.+.||+|+||+||+|++..+++.||||++.+. ...+.+.+|+++++.++||||+++++++.+++..|+
T Consensus 13 ~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l 92 (384)
T 4fr4_A 13 NFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFM 92 (384)
T ss_dssp CGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 456899999999999999999999999999999998652 345678899999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcc
Q 002063 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++..
T Consensus 93 v~e~~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~ 164 (384)
T 4fr4_A 93 VVDLLLGGDLRYHLQQN-----VHFKEETVKLFICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAM 164 (384)
T ss_dssp EECCCTTEEHHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEECCCCCEEEeccceeee
Confidence 99999999999999753 35889999999999999999999 78999999999999999999999999999987
Q ss_pred ccCCCCcccccccCccccccccccccc---CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccc
Q 002063 829 AENSPKVSDYSCFAGTHGYIAPELAYT---CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENV 905 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 905 (973)
..... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||..... ................
T Consensus 165 ~~~~~---~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~--~~~~~~~~~~~~~~~~- 238 (384)
T 4fr4_A 165 LPRET---QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSS--TSSKEIVHTFETTVVT- 238 (384)
T ss_dssp CCTTC---CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTT--SCHHHHHHHHHHCCCC-
T ss_pred ccCCC---ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCC--ccHHHHHHHHhhcccC-
Confidence 64432 2334679999999999863 4589999999999999999999999975422 2222222221111110
Q ss_pred hhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCC-HHHHHH
Q 002063 906 LKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPP-MREVVK 948 (973)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt-~~evl~ 948 (973)
.+......+.+++.+||+.||.+||+ +.++.+
T Consensus 239 -----------~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 239 -----------YPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp -----------CCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred -----------CCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 11123456889999999999999998 777765
No 87
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=8.4e-40 Score=365.14 Aligned_cols=264 Identities=26% Similarity=0.351 Sum_probs=211.4
Q ss_pred hcCCcccCeecccCcEEEEEEEEc-----CCCceEEEEEeeccc---cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCee
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLK-----KNAGTVAVKQLWKGD---GVKVFAAEMEILGKIRHRNILKLYACLLKGGSS 746 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~-----~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 746 (973)
.++|++.+.||+|+||+||+|++. .+++.||||++.... ..+.+.+|++++++++||||+++++++..++..
T Consensus 46 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 125 (343)
T 1luf_A 46 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPM 125 (343)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSC
T ss_pred HHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCce
Confidence 467899999999999999999997 345889999987632 346788999999999999999999999999999
Q ss_pred EEEEEccCCCchHHHHHhhhcC-------------------CCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCC
Q 002063 747 FLVLEYMPNGNLFQALHKRVKE-------------------GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKS 807 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~-------------------~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp 807 (973)
|+||||+++|+|.+++...... ....+++..+..++.|+++||+||| +++|+||||||
T Consensus 126 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp 202 (343)
T 1luf_A 126 CLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLAT 202 (343)
T ss_dssp EEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSG
T ss_pred EEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCc
Confidence 9999999999999999864211 1256899999999999999999999 78999999999
Q ss_pred CCeeecCCCceEEecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccC
Q 002063 808 SNILLDEDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYG 886 (973)
Q Consensus 808 ~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~ 886 (973)
+||+++.++.+||+|||+++...............+|+.|+|||++.+..++.++||||||+++|||++ |..||....
T Consensus 203 ~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~- 281 (343)
T 1luf_A 203 RNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA- 281 (343)
T ss_dssp GGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC-
T ss_pred ceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCC-
Confidence 999999999999999999986644332223334567899999999998899999999999999999999 999996531
Q ss_pred CCccHHHHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCCC
Q 002063 887 DGKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPCT 957 (973)
Q Consensus 887 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~ 957 (973)
............. ...+......+.+++.+||+.||++||++.+++++|+++....
T Consensus 282 ----~~~~~~~~~~~~~-----------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 282 ----HEEVIYYVRDGNI-----------LACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA 337 (343)
T ss_dssp ----HHHHHHHHHTTCC-----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred ----hHHHHHHHhCCCc-----------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence 1111111111100 0011123456889999999999999999999999999987644
No 88
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.5e-39 Score=367.94 Aligned_cols=262 Identities=27% Similarity=0.373 Sum_probs=213.2
Q ss_pred hcCCcccCeecccCcEEEEEEEEcC-------CCceEEEEEeecc---ccHHHHHHHHHHHHhc-CCCceeeEeEEEEeC
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKK-------NAGTVAVKQLWKG---DGVKVFAAEMEILGKI-RHRNILKLYACLLKG 743 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~-------~~~~vavK~~~~~---~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~ 743 (973)
.++|++.+.||+|+||+||+|++.. .+..||||++... ...+++.+|+++++++ +||||+++++++..+
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 3578899999999999999999753 3457999998763 3346688999999999 999999999999999
Q ss_pred CeeEEEEEccCCCchHHHHHhhhcC-----------CCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeee
Q 002063 744 GSSFLVLEYMPNGNLFQALHKRVKE-----------GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILL 812 (973)
Q Consensus 744 ~~~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill 812 (973)
+..++||||+++|+|.+++...... ....+++..+..++.|++.||+||| +.+|+||||||+||++
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll 224 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLV 224 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEE
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCcceEEE
Confidence 9999999999999999999875321 1245899999999999999999999 7899999999999999
Q ss_pred cCCCceEEecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccH
Q 002063 813 DEDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDI 891 (973)
Q Consensus 813 ~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~ 891 (973)
+.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |..||.... .
T Consensus 225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~-----~ 299 (382)
T 3tt0_A 225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP-----V 299 (382)
T ss_dssp CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-----H
T ss_pred cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC-----H
Confidence 9999999999999987755443333444567899999999999999999999999999999999 999996541 1
Q ss_pred HHHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002063 892 VYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
............ ...+......+.+++.+||+.||++||++.|++++|+++..
T Consensus 300 ~~~~~~~~~~~~-----------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 352 (382)
T 3tt0_A 300 EELFKLLKEGHR-----------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 352 (382)
T ss_dssp HHHHHHHHTTCC-----------CCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCC-----------CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 122211111110 01111234568899999999999999999999999998754
No 89
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1.1e-39 Score=359.31 Aligned_cols=261 Identities=26% Similarity=0.357 Sum_probs=212.1
Q ss_pred hcCCcccCeecccCcEEEEEEEEc-----CCCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCee
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLK-----KNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSS 746 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~-----~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 746 (973)
..+|++.+.||+|+||+||+|++. .+++.||||++... ...+.+.+|++++++++||||+++++++..++..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 457889999999999999999983 44588999998763 3446788999999999999999999999999999
Q ss_pred EEEEEccCCCchHHHHHhhhcC-------------------CCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCC
Q 002063 747 FLVLEYMPNGNLFQALHKRVKE-------------------GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKS 807 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~-------------------~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp 807 (973)
++||||+++|+|.+++...... ....+++..+..++.|+++||+||| +++|+||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH---HCCCcccccch
Confidence 9999999999999999865221 1234889999999999999999999 78999999999
Q ss_pred CCeeecCCCceEEecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccC
Q 002063 808 SNILLDEDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYG 886 (973)
Q Consensus 808 ~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~ 886 (973)
+||+++.++.+||+|||++................+|+.|+|||++.+..++.++||||+||++|||++ |+.||....
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~- 257 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP- 257 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC-
T ss_pred heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCC-
Confidence 999999999999999999987755443333344567889999999999899999999999999999999 999997542
Q ss_pred CCccHHHHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002063 887 DGKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 887 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
.......+.... ...........+.+++.+||+.||++||++.|++++|+++.
T Consensus 258 -~~~~~~~~~~~~--------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~ 310 (314)
T 2ivs_A 258 -PERLFNLLKTGH--------------RMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMM 310 (314)
T ss_dssp -GGGHHHHHHTTC--------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -HHHHHHHhhcCC--------------cCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 122222211110 00111223456889999999999999999999999998753
No 90
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=4.7e-39 Score=354.35 Aligned_cols=273 Identities=20% Similarity=0.289 Sum_probs=195.8
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 751 (973)
..+|++.+.||+|+||+||+|++..+++.||||++... ...+.+.+|++++++++||||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 45789999999999999999999999999999998653 334678899999999999999999999999999999999
Q ss_pred ccCCCchHHHHHhhhcC-CCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcccc
Q 002063 752 YMPNGNLFQALHKRVKE-GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~-~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~ 830 (973)
|++ |+|.+++...... ....+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 997 6999999765322 2235889999999999999999999 7899999999999999999999999999998764
Q ss_pred CCCCcccccccCcccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccc-cc-hh
Q 002063 831 NSPKVSDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHE-NV-LK 907 (973)
Q Consensus 831 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~-~~ 907 (973)
.... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||.... .......+........ .. ..
T Consensus 160 ~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~ 235 (317)
T 2pmi_A 160 IPVN--TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTN--DEEQLKLIFDIMGTPNESLWPS 235 (317)
T ss_dssp SCCC--CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCSCCTTTCGG
T ss_pred CCcc--cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHHHHhCCCChhHhhh
Confidence 3322 22335689999999998764 68999999999999999999999997542 1111111111110000 00 00
Q ss_pred h-----ccccc------------cChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH--hhcCCC
Q 002063 908 V-----LDCEV------------ASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM--LADADP 955 (973)
Q Consensus 908 ~-----~~~~~------------~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~--L~~~~~ 955 (973)
. ..... ...........+.+++.+||+.||++|||+.|++++ +.+...
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~ 302 (317)
T 2pmi_A 236 VTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYH 302 (317)
T ss_dssp GGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCC
T ss_pred hhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhcccc
Confidence 0 00000 000011223568899999999999999999999986 444433
No 91
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=7.8e-40 Score=373.45 Aligned_cols=256 Identities=23% Similarity=0.266 Sum_probs=206.4
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc-----cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-----GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 749 (973)
.++|++.+.||+|+||+||+|+++.+++.||||++.+.. ....+.+|..++..++||||+++++++.+++..|+|
T Consensus 73 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV 152 (437)
T 4aw2_A 73 REDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLV 152 (437)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEE
Confidence 468999999999999999999999999999999987622 233478999999999999999999999999999999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccc
Q 002063 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
|||+++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++..
T Consensus 153 ~Ey~~gg~L~~~l~~~----~~~l~e~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~ 225 (437)
T 4aw2_A 153 MDYYVGGDLLTLLSKF----EDRLPEEMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKL 225 (437)
T ss_dssp ECCCTTCBHHHHHHTT----TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EecCCCCcHHHHHHHc----cCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeeEcCCCCEEEcchhhhhhc
Confidence 9999999999999753 345899999999999999999999 789999999999999999999999999999766
Q ss_pred cCCCCcccccccCcccccccccccc-----cCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccccc
Q 002063 830 ENSPKVSDYSCFAGTHGYIAPELAY-----TCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHEN 904 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 904 (973)
..... ......+||+.|+|||++. +..++.++||||+||++|||++|+.||... +..............
T Consensus 226 ~~~~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~-----~~~~~~~~i~~~~~~ 299 (437)
T 4aw2_A 226 MEDGT-VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAE-----SLVETYGKIMNHKER 299 (437)
T ss_dssp CTTSC-EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCS-----SHHHHHHHHHTHHHH
T ss_pred ccCCC-cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCC-----ChhHHHHhhhhcccc
Confidence 44322 2223357999999999986 567899999999999999999999999753 111111111111000
Q ss_pred chhhccccccChhhHHHHHHHHHHHHHhcCCCCCC--CCCHHHHHHHh
Q 002063 905 VLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNL--RPPMREVVKML 950 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--Rpt~~evl~~L 950 (973)
...+.. .......+.+++.+|+..+|++ ||++.|+++|-
T Consensus 300 ---~~~p~~----~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hp 340 (437)
T 4aw2_A 300 ---FQFPTQ----VTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHP 340 (437)
T ss_dssp ---CCCCSS----CCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSG
T ss_pred ---ccCCcc----cccCCHHHHHHHHHHhcccccccCCCCHHHHhCCC
Confidence 000110 1113446788999999988888 99999999874
No 92
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=6.7e-40 Score=368.75 Aligned_cols=257 Identities=28% Similarity=0.434 Sum_probs=197.4
Q ss_pred hcCCcccCeecccCcEEEEEEEEc---CCCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLK---KNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~---~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
..+|++.+.||+|+||+||+|++. .++..||||++... ...+.+.+|++++++++||||+++++++..++..++
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 457899999999999999999987 45778999998753 345678999999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcc
Q 002063 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||+++|+|.++++.. ...+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 124 v~e~~~~~sL~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 196 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKH----DAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGRV 196 (373)
T ss_dssp EEECCTTCBHHHHHHTT----TTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred EEeCCCCCcHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEEcCCCCEEECcCccccc
Confidence 99999999999999753 346899999999999999999999 78999999999999999999999999999987
Q ss_pred ccCCCCc-ccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccch
Q 002063 829 AENSPKV-SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVL 906 (973)
Q Consensus 829 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (973)
....... .......+++.|+|||++.+..++.++|||||||++|||++ |+.||.... .......+. ...
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~--~~~~~~~i~---~~~---- 267 (373)
T 2qol_A 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS--NQDVIKAVD---EGY---- 267 (373)
T ss_dssp -----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCC--HHHHHHHHH---TTE----
T ss_pred cccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHH---cCC----
Confidence 6543221 11122345778999999999999999999999999999998 999996541 111111111 110
Q ss_pred hhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002063 907 KVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
...........+.+++.+||+.||.+||++.+|++.|+.+.
T Consensus 268 -------~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~ 308 (373)
T 2qol_A 268 -------RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308 (373)
T ss_dssp -------ECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -------CCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHH
Confidence 00111223456889999999999999999999999998764
No 93
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=4.1e-39 Score=350.75 Aligned_cols=265 Identities=22% Similarity=0.265 Sum_probs=203.4
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 751 (973)
++|++.+.||+|+||+||+|++..+++.||||++... .....+.+|++++++++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 5789999999999999999999999999999998752 234678899999999999999999999999999999999
Q ss_pred ccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccC
Q 002063 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~ 831 (973)
|+++ ++.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 82 ~~~~-~l~~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lH---~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 153 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSC----NGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGI 153 (292)
T ss_dssp CCSE-EHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCS
T ss_pred cCCC-CHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceecCC
Confidence 9965 666666542 345899999999999999999999 78999999999999999999999999999987643
Q ss_pred CCCcccccccCcccccccccccccCC-CCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccccc----ch
Q 002063 832 SPKVSDYSCFAGTHGYIAPELAYTCK-VSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHEN----VL 906 (973)
Q Consensus 832 ~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~----~~ 906 (973)
... ......||+.|+|||++.+.. ++.++||||+||++|||++|..||....................... ..
T Consensus 154 ~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 231 (292)
T 3o0g_A 154 PVR--CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMT 231 (292)
T ss_dssp CCS--CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGG
T ss_pred ccc--cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhc
Confidence 322 233457899999999997766 79999999999999999999888643321111111111111000000 00
Q ss_pred hhcc---------ccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 907 KVLD---------CEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 907 ~~~~---------~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
...+ ..............+.+++.+|++.||++|||+.|+++|-
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp 284 (292)
T 3o0g_A 232 KLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHP 284 (292)
T ss_dssp GSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred ccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCc
Confidence 0000 0000111123445678999999999999999999999863
No 94
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=5.6e-39 Score=354.13 Aligned_cols=249 Identities=24% Similarity=0.343 Sum_probs=205.3
Q ss_pred CcccCeecccCcEEEEEEEEcCCCceEEEEEeec--cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccCC
Q 002063 678 LEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK--GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPN 755 (973)
Q Consensus 678 ~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~--~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 755 (973)
|+..+.||+|+||+||+|++..+|+.||||++.. ....+.+.+|+.++++++||||+++++++..++..++||||+++
T Consensus 47 ~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 126 (321)
T 2c30_A 47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQG 126 (321)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCS
T ss_pred hhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCC
Confidence 5666789999999999999998899999999875 34567789999999999999999999999999999999999999
Q ss_pred CchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCc
Q 002063 756 GNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKV 835 (973)
Q Consensus 756 gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 835 (973)
|+|.+++.. ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++........
T Consensus 127 ~~L~~~l~~------~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~- 196 (321)
T 2c30_A 127 GALTDIVSQ------VRLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP- 196 (321)
T ss_dssp CBHHHHHTT------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC-
T ss_pred CCHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCcc-
Confidence 999998863 25899999999999999999999 78999999999999999999999999999986654322
Q ss_pred ccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccccC
Q 002063 836 SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVAS 915 (973)
Q Consensus 836 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (973)
......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ............. +..
T Consensus 197 -~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~-----~~~~~~~~~~~~~-------~~~-- 261 (321)
T 2c30_A 197 -KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDS-----PVQAMKRLRDSPP-------PKL-- 261 (321)
T ss_dssp -CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC-----HHHHHHHHHHSSC-------CCC--
T ss_pred -ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHhcCCC-------CCc--
Confidence 2234579999999999999999999999999999999999999996531 1111111111111 000
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 916 ESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 916 ~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
.........+.+++.+||+.||++||++.|++++-.
T Consensus 262 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~ 297 (321)
T 2c30_A 262 KNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPF 297 (321)
T ss_dssp TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGG
T ss_pred CccccCCHHHHHHHHHHccCChhhCcCHHHHhcChh
Confidence 011123456888999999999999999999998744
No 95
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=3.3e-39 Score=361.50 Aligned_cols=253 Identities=24% Similarity=0.306 Sum_probs=207.1
Q ss_pred HHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEE
Q 002063 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
...++|++.+.||+|+||+||+|.+..+++.||||++... ...+.+.+|++++++++||||+++++++.+++..|+
T Consensus 26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l 105 (362)
T 2bdw_A 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 105 (362)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 3456799999999999999999999999999999998753 244668899999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCC---CceEEecccC
Q 002063 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDED---YEPKIADFGV 825 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~---~~~kl~Dfgl 825 (973)
||||+++|+|.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+||+++.+ +.+||+|||+
T Consensus 106 v~e~~~gg~L~~~l~~-----~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~ 177 (362)
T 2bdw_A 106 VFDLVTGGELFEDIVA-----REFYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGL 177 (362)
T ss_dssp EECCCCSCBHHHHHTT-----CSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred EEecCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEeecCc
Confidence 9999999999998864 235889999999999999999999 7899999999999999865 4599999999
Q ss_pred CccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccc
Q 002063 826 AKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENV 905 (973)
Q Consensus 826 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 905 (973)
+....... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||.... ..............
T Consensus 178 a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~-----~~~~~~~i~~~~~~- 248 (362)
T 2bdw_A 178 AIEVNDSE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED-----QHRLYAQIKAGAYD- 248 (362)
T ss_dssp CBCCTTCC---SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHTCCC-
T ss_pred ceEecCCc---ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHhCCCC-
Confidence 98665332 2234579999999999999899999999999999999999999996531 11111111111100
Q ss_pred hhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 906 LKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
............+.+++.+||+.||++||++.|++++
T Consensus 249 -------~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 249 -------YPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp -------CCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred -------CCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0011112334568899999999999999999999876
No 96
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=2.6e-39 Score=354.41 Aligned_cols=261 Identities=29% Similarity=0.443 Sum_probs=201.8
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeec----cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK----GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~----~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 750 (973)
..+|++.+.||+|+||+||+|++.. .+|||+++. ....+.+.+|++++++++||||+++++++. ++..++||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~~---~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~ 110 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVT 110 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEECC---EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEE
Confidence 4689999999999999999998764 588887764 234567889999999999999999999764 55689999
Q ss_pred EccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcccc
Q 002063 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~ 830 (973)
||+++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 111 e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~ 183 (307)
T 3lb7_A 111 QWCEGSSLYKHLHVQ----ETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKS 183 (307)
T ss_dssp ECCSSCBHHHHHHTS----CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCSSSEEECTTSCEEECCCCSSCC--
T ss_pred ecCCCCcHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCChhhEEEcCCCCEEEccCCCceecc
Confidence 999999999999743 446899999999999999999999 7799999999999999999999999999998654
Q ss_pred CCCCcccccccCcccccccccccc---cCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchh
Q 002063 831 NSPKVSDYSCFAGTHGYIAPELAY---TCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLK 907 (973)
Q Consensus 831 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
............||+.|+|||++. +..++.++|||||||++|||++|+.||..... .......+.... ..+..
T Consensus 184 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~-~~~~~~~~~~~~-~~~~~-- 259 (307)
T 3lb7_A 184 RWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINN-RDQIIFMVGRGY-ASPDL-- 259 (307)
T ss_dssp ----------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC-HHHHHHHHHHTC-CCCCS--
T ss_pred cccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCc-HHHHHHHHhcCC-CCcch--
Confidence 333333334457999999999986 66788999999999999999999999975421 111111111110 11100
Q ss_pred hccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCCC
Q 002063 908 VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPCT 957 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~ 957 (973)
..........+.+++.+||+.||++||++.+++++|+.+....
T Consensus 260 -------~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~ 302 (307)
T 3lb7_A 260 -------SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp -------TTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred -------hhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhc
Confidence 0111223456889999999999999999999999999886554
No 97
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=2.7e-39 Score=359.26 Aligned_cols=254 Identities=21% Similarity=0.310 Sum_probs=203.2
Q ss_pred HHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeec---cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCC-----
Q 002063 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK---GDGVKVFAAEMEILGKIRHRNILKLYACLLKGG----- 744 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~---~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~----- 744 (973)
+..++|++.+.||+|+||+||+|++..+++.||||++.. +...+.+.+|++++++++||||+++++++.+..
T Consensus 3 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 82 (332)
T 3qd2_B 3 RYLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQ 82 (332)
T ss_dssp HHHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHH
T ss_pred hhhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhh
Confidence 345789999999999999999999998899999999864 334577899999999999999999999986543
Q ss_pred ----------------------------------------------------eeEEEEEccCCCchHHHHHhhhcCCCCC
Q 002063 745 ----------------------------------------------------SSFLVLEYMPNGNLFQALHKRVKEGKPE 772 (973)
Q Consensus 745 ----------------------------------------------------~~~lv~e~~~~gsL~~~l~~~~~~~~~~ 772 (973)
..++||||+++|+|.+++... .....
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~ 160 (332)
T 3qd2_B 83 EEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRR--CSLED 160 (332)
T ss_dssp HHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTC--CSGGG
T ss_pred hhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcc--cCccc
Confidence 379999999999999999864 23344
Q ss_pred cCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCc----------ccccccC
Q 002063 773 LDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKV----------SDYSCFA 842 (973)
Q Consensus 773 ~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~----------~~~~~~~ 842 (973)
.++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++........ .......
T Consensus 161 ~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (332)
T 3qd2_B 161 REHGVCLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQV 237 (332)
T ss_dssp SCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC
T ss_pred hhhHHHHHHHHHHHHHHHHHH---hCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccC
Confidence 577788999999999999999 789999999999999999999999999999877543211 1223356
Q ss_pred cccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccccChhhHHHH
Q 002063 843 GTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDM 922 (973)
Q Consensus 843 gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (973)
||+.|+|||++.+..++.++||||+||++|||++|..|+... ........ ............
T Consensus 238 gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~-------~~~~~~~~-----------~~~~~~~~~~~~ 299 (332)
T 3qd2_B 238 GTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER-------VRIITDVR-----------NLKFPLLFTQKY 299 (332)
T ss_dssp -CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH-------HHHHHHHH-----------TTCCCHHHHHHC
T ss_pred CCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH-------HHHHHHhh-----------ccCCCcccccCC
Confidence 999999999999999999999999999999999987765321 01111000 001122234445
Q ss_pred HHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 923 IKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 923 ~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
..+.+++.+||+.||++||++.|++++
T Consensus 300 ~~~~~li~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 300 PQEHMMVQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHHHHHHHHHCSSGGGSCCHHHHHHS
T ss_pred hhHHHHHHHHccCCCCcCCCHHHHhhc
Confidence 667899999999999999999999985
No 98
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1.7e-39 Score=359.41 Aligned_cols=261 Identities=23% Similarity=0.327 Sum_probs=194.4
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCc---eEEEEEeec----cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCee-
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAG---TVAVKQLWK----GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSS- 746 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~---~vavK~~~~----~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~- 746 (973)
.++|++.+.||+|+||+||+|++..+++ .||||++.. ....+.+.+|++++++++||||+++++++......
T Consensus 22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 101 (323)
T 3qup_A 22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKG 101 (323)
T ss_dssp ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC----
T ss_pred hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccccc
Confidence 4579999999999999999999887664 799998865 24457789999999999999999999999876654
Q ss_pred -----EEEEEccCCCchHHHHHhhhcC-CCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEE
Q 002063 747 -----FLVLEYMPNGNLFQALHKRVKE-GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKI 820 (973)
Q Consensus 747 -----~lv~e~~~~gsL~~~l~~~~~~-~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 820 (973)
++||||+++|+|.+++...... ....+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||
T Consensus 102 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~Dikp~NIli~~~~~~kl 178 (323)
T 3qup_A 102 RLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCV 178 (323)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEE
T ss_pred CCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH---cCCcccCCCCcceEEEcCCCCEEE
Confidence 9999999999999999765322 2235899999999999999999999 789999999999999999999999
Q ss_pred ecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhh
Q 002063 821 ADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHL 899 (973)
Q Consensus 821 ~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~ 899 (973)
+|||+++...............+++.|+|||++.+..++.++|||||||++|||++ |+.||.... .......+..
T Consensus 179 ~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~--~~~~~~~~~~-- 254 (323)
T 3qup_A 179 ADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIE--NAEIYNYLIG-- 254 (323)
T ss_dssp CCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--GGGHHHHHHT--
T ss_pred eeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccC--hHHHHHHHhc--
Confidence 99999987654433333334557889999999999999999999999999999999 999997542 1121111111
Q ss_pred cccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002063 900 NNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
... ..........+.+++.+||+.||++||++.++++.|+++.
T Consensus 255 -~~~-----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l 297 (323)
T 3qup_A 255 -GNR-----------LKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENIL 297 (323)
T ss_dssp -TCC-----------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -CCC-----------CCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 000 0111223456889999999999999999999999999764
No 99
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=4e-40 Score=364.41 Aligned_cols=257 Identities=24% Similarity=0.335 Sum_probs=204.2
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCce----EEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGT----VAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSF 747 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~----vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 747 (973)
..+|++.+.||+|+||+||+|++..+++. ||+|++... .....+.+|+.++++++||||+++++++. ++..+
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 90 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQ 90 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEE
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccE
Confidence 35789999999999999999999877766 777766442 23345778999999999999999999886 55689
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCc
Q 002063 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
+||||+++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++
T Consensus 91 ~v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~ 163 (325)
T 3kex_A 91 LVTQYLPLGSLLDHVRQH----RGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVAD 163 (325)
T ss_dssp EEEECCTTCBSHHHHHSS----GGGSCTTHHHHHHHHHHHHHHHHH---HTTCCCSCCSSTTEEESSSSCEEECSCSGGG
T ss_pred EEEEeCCCCCHHHHHHHc----cccCCHHHHHHHHHHHHHHHHHHH---hCCCCCCccchheEEECCCCeEEECCCCccc
Confidence 999999999999999753 235788899999999999999999 7899999999999999999999999999998
Q ss_pred cccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccch
Q 002063 828 IAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVL 906 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (973)
...............||..|+|||++.+..++.++|||||||++|||++ |+.||.... .......+.... ..
T Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~--~~~~~~~~~~~~--~~--- 236 (325)
T 3kex_A 164 LLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLR--LAEVPDLLEKGE--RL--- 236 (325)
T ss_dssp GSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSC--TTHHHHHHHTTC--BC---
T ss_pred ccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccC--HHHHHHHHHcCC--CC---
Confidence 7765544444445678889999999999999999999999999999999 999997642 122222221110 00
Q ss_pred hhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002063 907 KVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
..+......+.+++.+||+.||.+||++.+++++|+.+..
T Consensus 237 ---------~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~ 276 (325)
T 3kex_A 237 ---------AQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR 276 (325)
T ss_dssp ---------CCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred ---------CCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 0011122347789999999999999999999999987653
No 100
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=3.2e-39 Score=358.13 Aligned_cols=250 Identities=28% Similarity=0.395 Sum_probs=205.7
Q ss_pred HHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhc-CCCceeeEeEEEEeCCee
Q 002063 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSS 746 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~ 746 (973)
...++|++.+.||+|+||+||+|+++.+++.||||++.+. ...+.+.+|.++++.+ +||||+++++++.+++..
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 3457899999999999999999999999999999998763 3456678899999887 999999999999999999
Q ss_pred EEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCC
Q 002063 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVA 826 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~ 826 (973)
|+||||+++|+|.+++... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++
T Consensus 94 ~lv~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a 165 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQSC-----HKFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMC 165 (345)
T ss_dssp EEEEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred EEEEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCChhhEEECCCCCEEEeEChhh
Confidence 9999999999999999864 25789999999999999999999 789999999999999999999999999999
Q ss_pred ccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccch
Q 002063 827 KIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVL 906 (973)
Q Consensus 827 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (973)
+...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||... +..............
T Consensus 166 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~-----~~~~~~~~i~~~~~~-- 236 (345)
T 1xjd_A 166 KENMLGD--AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ-----DEEELFHSIRMDNPF-- 236 (345)
T ss_dssp BCCCCTT--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHCCCC--
T ss_pred hhcccCC--CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCC-----CHHHHHHHHHhCCCC--
Confidence 7543221 1233467999999999999999999999999999999999999999653 111222221111111
Q ss_pred hhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHH-HHHHH
Q 002063 907 KVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMR-EVVKM 949 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~-evl~~ 949 (973)
. +......+.+++.+||+.||++||++. ++++|
T Consensus 237 ------~----p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~h 270 (345)
T 1xjd_A 237 ------Y----PRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQH 270 (345)
T ss_dssp ------C----CTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGS
T ss_pred ------C----CcccCHHHHHHHHHHhcCCHhHcCCChHHHHcC
Confidence 1 111234678899999999999999998 77654
No 101
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=5.5e-39 Score=352.61 Aligned_cols=263 Identities=24% Similarity=0.286 Sum_probs=202.8
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEE
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 749 (973)
..++|++.+.||+|+||+||+|++.. ++.||||++... .....+.+|++++++++||||+++++++.+++..++|
T Consensus 19 l~~~y~~~~~lG~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 97 (311)
T 3niz_A 19 LMEKYQKLEKVGEGTYGVVYKAKDSQ-GRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLV 97 (311)
T ss_dssp SSCEEEEEEEEEECSSCEEEEEEETT-SCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEE
T ss_pred hHhhhHhhhhccCCCCeEEEEEEECC-CCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEE
Confidence 45689999999999999999999965 889999998652 2345688999999999999999999999999999999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccc
Q 002063 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
|||++ |+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 98 ~e~~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~ 169 (311)
T 3niz_A 98 FEFME-KDLKKVLDEN----KTGLQDSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAF 169 (311)
T ss_dssp EECCS-EEHHHHHHTC----TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEET
T ss_pred EcCCC-CCHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCchHhEEECCCCCEEEccCcCceec
Confidence 99997 5888888643 345889999999999999999999 789999999999999999999999999999876
Q ss_pred cCCCCcccccccCccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccccc--ch
Q 002063 830 ENSPKVSDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHEN--VL 906 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--~~ 906 (973)
..... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... +....+......... ..
T Consensus 170 ~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~i~~~~~~~~~~~~~ 245 (311)
T 3niz_A 170 GIPVR--SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDD--DQLPKIFSILGTPNPREWP 245 (311)
T ss_dssp TSCCC-----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTT--THHHHHHHHHCCCCTTTSG
T ss_pred CCCcc--cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHHHCCCChHHhh
Confidence 43322 2233568999999999876 56899999999999999999999999764322 211221111111000 00
Q ss_pred h-------------hccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 907 K-------------VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 907 ~-------------~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
. ................++.+++.+|+++||++|||+.|+++|
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 246 QVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp GGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 0 000000000111234567899999999999999999999985
No 102
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-39 Score=363.36 Aligned_cols=266 Identities=23% Similarity=0.310 Sum_probs=210.6
Q ss_pred HhcCCcccCeecccCcEEEEEEEEc-----CCCceEEEEEeecc---ccHHHHHHHHHHHHhc-CCCceeeEeEEEEeCC
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLK-----KNAGTVAVKQLWKG---DGVKVFAAEMEILGKI-RHRNILKLYACLLKGG 744 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~-----~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~ 744 (973)
..++|++.+.||+|+||+||+|++. .++..||||++... ...+.+.+|+++++++ +||||+++++++..++
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 122 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence 3468899999999999999999973 35678999998753 3456789999999999 8999999999999999
Q ss_pred eeEEEEEccCCCchHHHHHhhhcC------------------CCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCC
Q 002063 745 SSFLVLEYMPNGNLFQALHKRVKE------------------GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIK 806 (973)
Q Consensus 745 ~~~lv~e~~~~gsL~~~l~~~~~~------------------~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk 806 (973)
..++||||+++|+|.+++...... ....+++..+..++.|++.||+||| +.+|+|||||
T Consensus 123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dik 199 (344)
T 1rjb_A 123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLA 199 (344)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEEETTCS
T ss_pred ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCC
Confidence 999999999999999999864211 0124789999999999999999999 7899999999
Q ss_pred CCCeeecCCCceEEecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCccc
Q 002063 807 SSNILLDEDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEY 885 (973)
Q Consensus 807 p~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~ 885 (973)
|+||+++.++.+||+|||++................||+.|+|||++.+..++.++|||||||++|||++ |..||....
T Consensus 200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 279 (344)
T 1rjb_A 200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP 279 (344)
T ss_dssp GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCC
Confidence 9999999999999999999987654433333334567889999999999999999999999999999998 999997642
Q ss_pred CCCccHHHHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCCC
Q 002063 886 GDGKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPCT 957 (973)
Q Consensus 886 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~ 957 (973)
.. ......+... .....+......+.+++.+||+.||.+||++.+++++|+.+....
T Consensus 280 ~~-~~~~~~~~~~--------------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 336 (344)
T 1rjb_A 280 VD-ANFYKLIQNG--------------FKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADA 336 (344)
T ss_dssp CS-HHHHHHHHTT--------------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred cH-HHHHHHHhcC--------------CCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHH
Confidence 11 1111111111 000111123456889999999999999999999999999876544
No 103
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.7e-39 Score=362.37 Aligned_cols=254 Identities=28% Similarity=0.357 Sum_probs=192.9
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccC
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMP 754 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 754 (973)
.++|++.+.||+|+||+||+|++..+++.||||++......+.+.+|++++++++||||+++++++..++..++||||++
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 131 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVT 131 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC----------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccchhHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCC
Confidence 45789999999999999999999998999999999877667788899999999999999999999999999999999999
Q ss_pred CCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecC---CCceEEecccCCccccC
Q 002063 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE---DYEPKIADFGVAKIAEN 831 (973)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~---~~~~kl~Dfgl~~~~~~ 831 (973)
+|+|.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||+++....
T Consensus 132 ~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 203 (349)
T 2w4o_A 132 GGELFDRIVE-----KGYYSERDAADAVKQILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH 203 (349)
T ss_dssp SCBHHHHHTT-----CSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESSSSTTCCEEECCCC-------
T ss_pred CCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCcccEEEecCCCCCCEEEccCccccccCc
Confidence 9999999864 235889999999999999999999 789999999999999975 88999999999986543
Q ss_pred CCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccc
Q 002063 832 SPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDC 911 (973)
Q Consensus 832 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (973)
.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .............
T Consensus 204 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~----~~~~~~i~~~~~~------- 269 (349)
T 2w4o_A 204 QV---LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGD----QFMFRRILNCEYY------- 269 (349)
T ss_dssp ------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCH----HHHHHHHHTTCCC-------
T ss_pred cc---ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCccc----HHHHHHHHhCCCc-------
Confidence 22 123356899999999999999999999999999999999999999654211 1111111111110
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 912 EVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 912 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
.......+....+.+++.+||+.||++|||+.|++++-.
T Consensus 270 -~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~ 308 (349)
T 2w4o_A 270 -FISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPW 308 (349)
T ss_dssp -CCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTT
T ss_pred -cCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcCcc
Confidence 001111233456889999999999999999999998743
No 104
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1.4e-39 Score=361.79 Aligned_cols=262 Identities=25% Similarity=0.380 Sum_probs=210.6
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCc-----eEEEEEeecc---ccHHHHHHHHHHHHhc-CCCceeeEeEEEEeCCe
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAG-----TVAVKQLWKG---DGVKVFAAEMEILGKI-RHRNILKLYACLLKGGS 745 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~-----~vavK~~~~~---~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~ 745 (973)
.++|++.+.||+|+||+||+|.+..+++ .||||++... ...+.+.+|+++++++ +||||+++++++..++.
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 124 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGP 124 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCc
Confidence 4688999999999999999999876554 7999998764 3456788999999999 89999999999999999
Q ss_pred eEEEEEccCCCchHHHHHhhhcC---------CCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCC
Q 002063 746 SFLVLEYMPNGNLFQALHKRVKE---------GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDY 816 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~---------~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~ 816 (973)
.++||||+++|+|.+++...... ....+++..+..++.|++.||+||| +.+|+||||||+||+++.++
T Consensus 125 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~ 201 (333)
T 2i1m_A 125 VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGH 201 (333)
T ss_dssp CEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGCEEEGGG
T ss_pred eEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCcccceEEECCCC
Confidence 99999999999999999764211 1235789999999999999999999 78999999999999999999
Q ss_pred ceEEecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHH
Q 002063 817 EPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWV 895 (973)
Q Consensus 817 ~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~ 895 (973)
.+||+|||++................+|+.|+|||++.+..++.++|||||||++|||++ |..||...... ......+
T Consensus 202 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~-~~~~~~~ 280 (333)
T 2i1m_A 202 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVN-SKFYKLV 280 (333)
T ss_dssp EEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSS-HHHHHHH
T ss_pred eEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchh-HHHHHHH
Confidence 999999999986654433333334557889999999999999999999999999999998 99999754211 1111111
Q ss_pred HHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002063 896 STHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
..... ...+......+.+++.+||+.||.+||++.|++++|+++.
T Consensus 281 ~~~~~--------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~ 325 (333)
T 2i1m_A 281 KDGYQ--------------MAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQA 325 (333)
T ss_dssp HHTCC--------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hcCCC--------------CCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHH
Confidence 11100 0011112346888999999999999999999999998753
No 105
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=8.1e-39 Score=356.15 Aligned_cols=247 Identities=21% Similarity=0.271 Sum_probs=208.0
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEE
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
..++|++.+.||+|+||+||+|++..+++.||||++.+. ...+.+.+|+++++.++||||+++++++.+++..|+
T Consensus 39 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 118 (350)
T 1rdq_E 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM 118 (350)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred CHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEE
Confidence 356899999999999999999999999999999998653 345678899999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcc
Q 002063 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||+++|+|.+++... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++.
T Consensus 119 v~e~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~ 190 (350)
T 1rdq_E 119 VMEYVAGGEMFSHLRRI-----GRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190 (350)
T ss_dssp EEECCTTCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEcCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCccceEEECCCCCEEEccccccee
Confidence 99999999999999864 24789999999999999999999 78999999999999999999999999999986
Q ss_pred ccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhh
Q 002063 829 AENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKV 908 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (973)
.... .....||+.|+|||++.+..++.++||||+||++|||++|+.||... +..............
T Consensus 191 ~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~-----~~~~~~~~i~~~~~~---- 256 (350)
T 1rdq_E 191 VKGR-----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD-----QPIQIYEKIVSGKVR---- 256 (350)
T ss_dssp CSSC-----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHCCCC----
T ss_pred ccCC-----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCC-----CHHHHHHHHHcCCCC----
Confidence 6432 22356899999999999999999999999999999999999999653 112222222111110
Q ss_pred ccccccChhhHHHHHHHHHHHHHhcCCCCCCCCC-----HHHHHHHh
Q 002063 909 LDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPP-----MREVVKML 950 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt-----~~evl~~L 950 (973)
.+......+.+++.+||+.||.+||+ +.|+++|-
T Consensus 257 --------~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~ 295 (350)
T 1rdq_E 257 --------FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHK 295 (350)
T ss_dssp --------CCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSG
T ss_pred --------CCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCc
Confidence 01123456889999999999999998 89998764
No 106
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=1e-38 Score=349.35 Aligned_cols=265 Identities=26% Similarity=0.357 Sum_probs=205.4
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHh--cCCCceeeEeEEEEe----CCeeEE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGK--IRHRNILKLYACLLK----GGSSFL 748 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~--l~hpniv~l~~~~~~----~~~~~l 748 (973)
.++|++.+.||+|+||+||+|++. ++.||||++... ....+.+|.+++.. ++||||+++++++.. ....++
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~-~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~l 83 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSWQ--GENVAVKIFSSR-DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWL 83 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEET--TEEEEEEEECGG-GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEEC--CEEEEEEEeccc-cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEE
Confidence 468899999999999999999884 889999988654 34556677777766 799999999998754 345899
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcC-----CCCeEecCCCCCCeeecCCCceEEecc
Q 002063 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDC-----SPPIIHRDIKSSNILLDEDYEPKIADF 823 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~-----~~~ivH~Dlkp~Nill~~~~~~kl~Df 823 (973)
||||+++|+|.++++. ..+++..+..++.|++.||+|||+.. +++|+||||||+||+++.++.+||+||
T Consensus 84 v~e~~~~g~L~~~l~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 157 (301)
T 3q4u_A 84 ITHYHEMGSLYDYLQL------TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADL 157 (301)
T ss_dssp EECCCTTCBHHHHHTT------CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCC
T ss_pred ehhhccCCCHHHHHhh------cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeC
Confidence 9999999999999953 25899999999999999999999321 468999999999999999999999999
Q ss_pred cCCccccCCCCcc--cccccCcccccccccccccC------CCCccchHHHHHHHHHHHHhC----------CCCCCccc
Q 002063 824 GVAKIAENSPKVS--DYSCFAGTHGYIAPELAYTC------KVSEKSDVFSFGVVLLELVTG----------RKPVEEEY 885 (973)
Q Consensus 824 gl~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwslG~~l~ell~g----------~~pf~~~~ 885 (973)
|+++......... ......||+.|+|||++.+. .++.++|||||||++|||++| +.||....
T Consensus 158 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~ 237 (301)
T 3q4u_A 158 GLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVV 237 (301)
T ss_dssp TTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred CCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccC
Confidence 9998665433221 12234799999999999776 455789999999999999999 88886654
Q ss_pred CCCccHHHHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcC
Q 002063 886 GDGKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADA 953 (973)
Q Consensus 886 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 953 (973)
.................. .... ............+.+++.+||+.||++|||+.+|++.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 238 PNDPSFEDMRKVVCVDQQ-RPNI----PNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp CSSCCHHHHHHHHTTSCC-CCCC----CGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCcchhhhhHHHhccCC-CCCC----ChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 333333333222211111 0000 01112334567899999999999999999999999999864
No 107
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=1.8e-39 Score=357.54 Aligned_cols=262 Identities=27% Similarity=0.399 Sum_probs=211.6
Q ss_pred hcCCcccCeecccCcEEEEEEEE-----cCCCceEEEEEeeccc---cHHHHHHHHHHHHhc-CCCceeeEeEEEEeCCe
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDL-----KKNAGTVAVKQLWKGD---GVKVFAAEMEILGKI-RHRNILKLYACLLKGGS 745 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~-----~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~ 745 (973)
.++|++.+.||+|+||+||+|++ ..+++.||||++.... ..+.+.+|+++++++ +||||+++++++..++.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 101 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence 35788999999999999999985 3567899999987642 346788999999999 99999999999999999
Q ss_pred eEEEEEccCCCchHHHHHhhhc-------------CCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeee
Q 002063 746 SFLVLEYMPNGNLFQALHKRVK-------------EGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILL 812 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~-------------~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill 812 (973)
.++||||+++|+|.+++..... .....+++..+..++.|+++||+||| +.+++||||||+||++
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~ 178 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILL 178 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEE
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceEEE
Confidence 9999999999999999986521 11234899999999999999999999 7899999999999999
Q ss_pred cCCCceEEecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccH
Q 002063 813 DEDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDI 891 (973)
Q Consensus 813 ~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~ 891 (973)
+.++.+||+|||++................+|+.|+|||++.+..++.++||||||+++|||++ |+.||...... ...
T Consensus 179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-~~~ 257 (313)
T 1t46_A 179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD-SKF 257 (313)
T ss_dssp ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS-HHH
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccch-hHH
Confidence 9999999999999987765443333334557889999999999999999999999999999999 99999764221 111
Q ss_pred HHHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002063 892 VYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
...+..... ..........+.+++.+||+.||.+||++.|++++|+++.
T Consensus 258 ~~~~~~~~~--------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 306 (313)
T 1t46_A 258 YKMIKEGFR--------------MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 306 (313)
T ss_dssp HHHHHHTCC--------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHhccCCC--------------CCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 111111100 0011123456889999999999999999999999998754
No 108
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=8.6e-39 Score=355.43 Aligned_cols=254 Identities=24% Similarity=0.347 Sum_probs=205.3
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhc-CCCceeeEeEEEEeCCeeEE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~l 748 (973)
.++|++.+.||+|+||+||+|+++.+++.||||++.+. ...+.+.+|..+++++ +||||+++++++.+++..|+
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 46789999999999999999999999999999998763 2345678899999988 89999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcc
Q 002063 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||+++|+|.+++... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++.
T Consensus 88 v~e~~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~ 159 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE 159 (345)
T ss_dssp EECCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCGGGCBC
T ss_pred EEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEEecccccc
Confidence 99999999999999764 35889999999999999999999 78999999999999999999999999999975
Q ss_pred ccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCC----ccHHHHHHHhhccccc
Q 002063 829 AENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDG----KDIVYWVSTHLNNHEN 904 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~----~~~~~~~~~~~~~~~~ 904 (973)
..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||....... ................
T Consensus 160 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~ 237 (345)
T 3a8x_A 160 GLRPG--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR 237 (345)
T ss_dssp SCCTT--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCC
T ss_pred ccCCC--CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCC
Confidence 43221 12334579999999999999999999999999999999999999996532110 1111111111111110
Q ss_pred chhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCH------HHHHHHh
Q 002063 905 VLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPM------REVVKML 950 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~------~evl~~L 950 (973)
.+......+.+++.+||+.||.+||++ .|+++|-
T Consensus 238 ------------~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp 277 (345)
T 3a8x_A 238 ------------IPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHP 277 (345)
T ss_dssp ------------CCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSG
T ss_pred ------------CCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCC
Confidence 111234567889999999999999995 6777663
No 109
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.5e-39 Score=355.21 Aligned_cols=250 Identities=28% Similarity=0.323 Sum_probs=198.6
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc----------------------------cHHHHHHHHHHH
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD----------------------------GVKVFAAEMEIL 725 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~----------------------------~~~~~~~E~~~l 725 (973)
..++|++.+.||+|+||+||+|++..+++.||||++.... ..+.+.+|++++
T Consensus 11 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 90 (298)
T 2zv2_A 11 QLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAIL 90 (298)
T ss_dssp EETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHH
T ss_pred eecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHH
Confidence 3568999999999999999999999999999999986532 124578999999
Q ss_pred HhcCCCceeeEeEEEEe--CCeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEec
Q 002063 726 GKIRHRNILKLYACLLK--GGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHR 803 (973)
Q Consensus 726 ~~l~hpniv~l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~ 803 (973)
++++||||+++++++.+ ++..|+||||+++|+|.+++. ...+++..+..++.|+++||+||| +.+|+||
T Consensus 91 ~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~------~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~ 161 (298)
T 2zv2_A 91 KKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT------LKPLSEDQARFYFQDLIKGIEYLH---YQKIIHR 161 (298)
T ss_dssp HTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC------SSCCCHHHHHHHHHHHHHHHHHHH---HTTEECC
T ss_pred HhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh------cCCCCHHHHHHHHHHHHHHHHHHH---HCCeecc
Confidence 99999999999999986 568899999999999977542 336899999999999999999999 7899999
Q ss_pred CCCCCCeeecCCCceEEecccCCccccCCCCcccccccCcccccccccccccCC---CCccchHHHHHHHHHHHHhCCCC
Q 002063 804 DIKSSNILLDEDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCK---VSEKSDVFSFGVVLLELVTGRKP 880 (973)
Q Consensus 804 Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwslG~~l~ell~g~~p 880 (973)
||||+||+++.++.+||+|||+++....... ......||+.|+|||++.+.. ++.++|||||||++|||++|+.|
T Consensus 162 Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p 239 (298)
T 2zv2_A 162 DIKPSNLLVGEDGHIKIADFGVSNEFKGSDA--LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239 (298)
T ss_dssp CCCGGGEEECTTSCEEECCCTTCEECSSSSC--EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCS
T ss_pred CCCHHHEEECCCCCEEEecCCCccccccccc--cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCC
Confidence 9999999999999999999999987654322 223457899999999987665 37789999999999999999999
Q ss_pred CCcccCCCccHHHHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 881 VEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 881 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
|... ................ .........+.+++.+||+.||++||++.|+++|
T Consensus 240 f~~~-----~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 240 FMDE-----RIMCLHSKIKSQALEF----------PDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp SCCS-----SHHHHHHHHHHCCCCC----------CSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred CCCc-----cHHHHHHHHhcccCCC----------CCccccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence 9653 1112211111111000 0011223468899999999999999999999875
No 110
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=2.4e-39 Score=378.08 Aligned_cols=258 Identities=25% Similarity=0.341 Sum_probs=214.2
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEcc
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
..+|++.+.||+|+||+||+|++..++..||||++... ...+.+.+|++++++++||||+++++++..++..|+||||+
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~ 298 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 298 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEcc
Confidence 35678899999999999999999988999999998763 45678999999999999999999999999999999999999
Q ss_pred CCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCC
Q 002063 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~ 833 (973)
++|+|.+++... ....+++..+..++.|+++||+||| +++|+||||||+|||++.++.+||+|||+++......
T Consensus 299 ~~g~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 372 (495)
T 1opk_A 299 TYGNLLDYLREC---NRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT 372 (495)
T ss_dssp TTCBHHHHHHHS---CTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCC
T ss_pred CCCCHHHHHHhc---CcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChhhEEECCCCcEEEeecccceeccCCc
Confidence 999999999853 3345889999999999999999999 7899999999999999999999999999998764332
Q ss_pred CcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhhcccc
Q 002063 834 KVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCE 912 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
. .......++..|+|||++.+..++.++|||||||++|||++ |+.||.... .......+...
T Consensus 373 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~--~~~~~~~~~~~-------------- 435 (495)
T 1opk_A 373 Y-TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID--LSQVYELLEKD-------------- 435 (495)
T ss_dssp E-ECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC--GGGHHHHHHTT--------------
T ss_pred e-eecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCC--HHHHHHHHHcC--------------
Confidence 1 22223456789999999998899999999999999999999 999997542 22222221111
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002063 913 VASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 913 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
.....+......+.+++.+||+.||++||++.++++.|+.+..
T Consensus 436 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~ 478 (495)
T 1opk_A 436 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 478 (495)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred CCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence 1111122334568899999999999999999999999998753
No 111
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=5.4e-39 Score=370.89 Aligned_cols=251 Identities=28% Similarity=0.406 Sum_probs=207.8
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHhcCCCceeeEeEEEEeCC-eeEEEEEcc
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYACLLKGG-SSFLVLEYM 753 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~-~~~lv~e~~ 753 (973)
.++|++.+.||+|+||+||+|++. ++.||||+++.....+.+.+|++++++++||||+++++++...+ ..|+||||+
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~ 269 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 269 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCTTSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECC
T ss_pred hHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCchHHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEec
Confidence 457889999999999999999986 67999999988777788999999999999999999999987665 789999999
Q ss_pred CCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCC
Q 002063 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~ 833 (973)
++|+|.+++... ....+++..+..++.|+++||+||| +++++||||||+||+++.++.+||+|||+++......
T Consensus 270 ~~g~L~~~l~~~---~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 343 (450)
T 1k9a_A 270 AKGSLVDYLRSR---GRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ 343 (450)
T ss_dssp TTCBHHHHHHHH---CTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTSCEEECCCTTCEECC---
T ss_pred CCCcHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEECCCCCEEEeeCCCcccccccc
Confidence 999999999864 2334788999999999999999999 7899999999999999999999999999998543221
Q ss_pred CcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhhcccc
Q 002063 834 KVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCE 912 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
....++..|+|||++.+..++.++|||||||++|||++ |+.||.... ..+....+....
T Consensus 344 -----~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~--~~~~~~~i~~~~------------- 403 (450)
T 1k9a_A 344 -----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP--LKDVVPRVEKGY------------- 403 (450)
T ss_dssp --------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSC--TTTHHHHHHTTC-------------
T ss_pred -----cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHHcCC-------------
Confidence 12356889999999999999999999999999999998 999997642 222222221110
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002063 913 VASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 913 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
....+......+.+++.+||+.||++|||+.++++.|+++.
T Consensus 404 -~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~ 444 (450)
T 1k9a_A 404 -KMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIR 444 (450)
T ss_dssp -CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 01112233456889999999999999999999999998764
No 112
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=3e-39 Score=361.98 Aligned_cols=255 Identities=25% Similarity=0.264 Sum_probs=198.7
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEcc
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
.++|++.+.||+|+||+||+|++..+++.||||++... ...+.+.+|+.++++++||||+++++++..++..|+||||+
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 98 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYA 98 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeC
Confidence 46899999999999999999999999999999998763 34467889999999999999999999999999999999999
Q ss_pred CCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCc--eEEecccCCccccC
Q 002063 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYE--PKIADFGVAKIAEN 831 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~--~kl~Dfgl~~~~~~ 831 (973)
++|+|.+++... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++. +||+|||+++....
T Consensus 99 ~~~~L~~~l~~~-----~~~~~~~~~~i~~ql~~~L~~LH---~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~ 170 (361)
T 3uc3_A 99 SGGELYERICNA-----GRFSEDEARFFFQQLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL 170 (361)
T ss_dssp CSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCSCCCCGGGEEECSSSSCCEEECCCCCC-----
T ss_pred CCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCceEEEeecCccccccc
Confidence 999999999754 25889999999999999999999 789999999999999987765 99999999874432
Q ss_pred CCCcccccccCcccccccccccccCCCCcc-chHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhcc
Q 002063 832 SPKVSDYSCFAGTHGYIAPELAYTCKVSEK-SDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLD 910 (973)
Q Consensus 832 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (973)
. .......||+.|+|||++.+..++.+ +||||+||++|+|++|+.||..... .......+..........
T Consensus 171 ~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-~~~~~~~~~~~~~~~~~~----- 241 (361)
T 3uc3_A 171 H---SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEE-PRDYRKTIQRILSVKYSI----- 241 (361)
T ss_dssp -------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC-----CCCHHHHHHHHHTTCCCC-----
T ss_pred c---CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCcc-HHHHHHHHHHHhcCCCCC-----
Confidence 2 12233569999999999988887765 8999999999999999999976422 122222222222111100
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 911 CEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 911 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
.........+.+++.+||+.||.+|||+.|+++|-.
T Consensus 242 -----~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~ 277 (361)
T 3uc3_A 242 -----PDDIRISPECCHLISRIFVADPATRISIPEIKTHSW 277 (361)
T ss_dssp -----CTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSHH
T ss_pred -----CCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhCcc
Confidence 011122356789999999999999999999998743
No 113
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=9.7e-38 Score=363.15 Aligned_cols=347 Identities=27% Similarity=0.379 Sum_probs=225.9
Q ss_pred cCCCCCcEEEecCCcccCCCCCcCCCCCCCEEeccCcccCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCE
Q 002063 118 SNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTY 197 (973)
Q Consensus 118 ~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~ 197 (973)
..+++|+.|++++|.+... +.+..+++|++|||++|.+++..+ +.++++|++|++++|.+.. ++. ++++++|++
T Consensus 43 ~~l~~l~~L~l~~~~i~~l-~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~--~~~-~~~l~~L~~ 116 (466)
T 1o6v_A 43 TDLDQVTTLQADRLGIKSI-DGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIAD--ITP-LANLTNLTG 116 (466)
T ss_dssp HHHHTCCEEECCSSCCCCC-TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC--CGG-GTTCTTCCE
T ss_pred hHhccccEEecCCCCCccC-cchhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCcccc--Chh-hcCCCCCCE
Confidence 4567899999999998774 468889999999999999986544 7888888888888887763 334 778888888
Q ss_pred EEcccccCCCCCChhhhccCCCCeeeccccccccccchhhhccccccEEEeecccCCCCCCccccccccccEEEeecccc
Q 002063 198 LFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQM 277 (973)
Q Consensus 198 L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l 277 (973)
|++++|.+++..+ +..+++|++|++++|++++ ++ .++.+++|++|+++ |.+.+.. .+.++++|++|++++|.+
T Consensus 117 L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l 189 (466)
T 1o6v_A 117 LTLFNNQITDIDP--LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKV 189 (466)
T ss_dssp EECCSSCCCCCGG--GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCC
T ss_pred EECCCCCCCCChH--HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcC
Confidence 8888888875432 7778888888888888774 33 47777777777775 4444332 266777777777777776
Q ss_pred ccccCCccCCCCCccEEEcccCCCCCCCCCCcCCccccceeeccccccCCCCCccccccccccccccccccccccCChhh
Q 002063 278 YGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYL 357 (973)
Q Consensus 278 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~ 357 (973)
.+. ..+..+++|+.|++++|.+.+..| ++.+++|+.|++++|++++. ..+..+
T Consensus 190 ~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l--------------------- 242 (466)
T 1o6v_A 190 SDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASL--------------------- 242 (466)
T ss_dssp CCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGC---------------------
T ss_pred CCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcC---------------------
Confidence 532 235666666666666666665433 44455555555555555431 233444
Q ss_pred hhhhhHHHHHhhhccCCCCCCCcccCccccceEecccccccccCCccccCCCCcceEeccCCcCCCCCCCccCCCCCCCE
Q 002063 358 CEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQ 437 (973)
Q Consensus 358 ~~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~ 437 (973)
++|++|++++|.+++..+ +..+++|+.|++++|++++..+ +..+++|+.
T Consensus 243 ---------------------------~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~ 291 (466)
T 1o6v_A 243 ---------------------------TNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTN 291 (466)
T ss_dssp ---------------------------TTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSE
T ss_pred ---------------------------CCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCe
Confidence 455555555555543333 4455555555555555554433 455566666
Q ss_pred EEcccCCCCCCCChhhhcCCCCCEEecCCCcCCCCccccccccccCCEEEccCcccccCCCccccCccccchhhcccccc
Q 002063 438 LVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSL 517 (973)
Q Consensus 438 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 517 (973)
|+|++|++++..+ +..+++|+.|+|++|++++..| +..+++|+.|++++|++++. ..+..+++|+.|++++|++
T Consensus 292 L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l 365 (466)
T 1o6v_A 292 LELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQI 365 (466)
T ss_dssp EECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCC
T ss_pred EEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCcc
Confidence 6666666664332 5666666666666666665544 55666666666666666654 3566666667777777766
Q ss_pred ccCCCccccccCCCCeeecCCCccCC
Q 002063 518 SGNIPRSLSLLSSLNALNLSGNKLTG 543 (973)
Q Consensus 518 ~~~~p~~~~~l~~L~~L~L~~N~l~~ 543 (973)
++..| +..+++|+.|++++|++++
T Consensus 366 ~~~~~--~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 366 SDLTP--LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp CBCGG--GTTCTTCCEEECCCEEEEC
T ss_pred Cccch--hhcCCCCCEEeccCCcccC
Confidence 66555 6666777777777777764
No 114
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=4.8e-39 Score=364.17 Aligned_cols=255 Identities=23% Similarity=0.295 Sum_probs=206.6
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEE
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
..++|++.+.||+|+||+||+|+++.+++.||||++.+. ...+.+.+|+.+++.++||||+++++++.+++..|+
T Consensus 67 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l 146 (410)
T 3v8s_A 67 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYM 146 (410)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEE
Confidence 356899999999999999999999999999999998762 233457899999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcc
Q 002063 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||+++|+|.++++.. .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 147 V~E~~~gg~L~~~l~~~------~~~e~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFG~a~~ 217 (410)
T 3v8s_A 147 VMEYMPGGDLVNLMSNY------DVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMK 217 (410)
T ss_dssp EECCCTTEEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEeCCCCCcHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeeECCCCCEEEeccceeEe
Confidence 99999999999998753 4788899999999999999999 78999999999999999999999999999987
Q ss_pred ccCCCCcccccccCcccccccccccccCC----CCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccccc
Q 002063 829 AENSPKVSDYSCFAGTHGYIAPELAYTCK----VSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHEN 904 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 904 (973)
...... .......||+.|+|||++.+.. ++.++|||||||++|||++|+.||... +..............
T Consensus 218 ~~~~~~-~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~-----~~~~~~~~i~~~~~~ 291 (410)
T 3v8s_A 218 MNKEGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD-----SLVGTYSKIMNHKNS 291 (410)
T ss_dssp CCTTSE-EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCS-----SHHHHHHHHHTHHHH
T ss_pred eccCCc-ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCC-----ChhhHHHHHHhcccc
Confidence 654322 1223467999999999997655 788999999999999999999999753 111222211111100
Q ss_pred chhhccccccChhhHHHHHHHHHHHHHhcCCCCCC--CCCHHHHHHHhh
Q 002063 905 VLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNL--RPPMREVVKMLA 951 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--Rpt~~evl~~L~ 951 (973)
. ..+ ........+.+++.+|++.+|.+ ||++.||++|-.
T Consensus 292 ~---~~p-----~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~ 332 (410)
T 3v8s_A 292 L---TFP-----DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLF 332 (410)
T ss_dssp C---CCC-----TTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGG
T ss_pred c---cCC-----CcccccHHHHHHHHHHccChhhhCCCCCHHHHhcCcc
Confidence 0 000 01122456788999999999998 999999998743
No 115
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=1e-38 Score=355.25 Aligned_cols=251 Identities=27% Similarity=0.343 Sum_probs=206.4
Q ss_pred HHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhc-CCCceeeEeEEEEeCCee
Q 002063 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSS 746 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~ 746 (973)
....+|++.+.||+|+||+||+|+++.+++.||||++.+. ...+.+.+|.+++..+ +||+|+++++++..++..
T Consensus 17 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~ 96 (353)
T 2i0e_A 17 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL 96 (353)
T ss_dssp --CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEE
T ss_pred CchHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEE
Confidence 3457899999999999999999999998999999998763 3456788999999988 899999999999999999
Q ss_pred EEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCC
Q 002063 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVA 826 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~ 826 (973)
|+||||+++|+|.+++... ..+++..+..++.|++.||+||| +++|+||||||+||+++.+|.+||+|||++
T Consensus 97 ~lv~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a 168 (353)
T 2i0e_A 97 YFVMEYVNGGDLMYHIQQV-----GRFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMC 168 (353)
T ss_dssp EEEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred EEEEeCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEEcCCCcEEEEeCCcc
Confidence 9999999999999999864 25889999999999999999999 789999999999999999999999999999
Q ss_pred ccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccch
Q 002063 827 KIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVL 906 (973)
Q Consensus 827 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (973)
+...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||... +..............
T Consensus 169 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~-----~~~~~~~~i~~~~~~-- 239 (353)
T 2i0e_A 169 KENIWDG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE-----DEDELFQSIMEHNVA-- 239 (353)
T ss_dssp BCCCCTT--CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHCCCC--
T ss_pred cccccCC--cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCC-----CHHHHHHHHHhCCCC--
Confidence 7543221 1233467999999999999999999999999999999999999999653 112222222211111
Q ss_pred hhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCC-----HHHHHHHh
Q 002063 907 KVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPP-----MREVVKML 950 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt-----~~evl~~L 950 (973)
.+......+.+++.+|++.||.+||+ +.++++|-
T Consensus 240 ----------~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~ 278 (353)
T 2i0e_A 240 ----------YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHA 278 (353)
T ss_dssp ----------CCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSG
T ss_pred ----------CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCc
Confidence 11123456889999999999999995 58887763
No 116
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=6.9e-39 Score=361.00 Aligned_cols=253 Identities=19% Similarity=0.231 Sum_probs=207.7
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc--ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEc
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 752 (973)
.++|++.+.||+|+||+||+|.+..+++.||+|++... .....+.+|++++++++||||+++++++.++...++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 46899999999999999999999999999999998764 3445788999999999999999999999999999999999
Q ss_pred cCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecC--CCceEEecccCCcccc
Q 002063 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE--DYEPKIADFGVAKIAE 830 (973)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~--~~~~kl~Dfgl~~~~~ 830 (973)
+++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||+++...
T Consensus 130 ~~gg~L~~~l~~~----~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~ 202 (387)
T 1kob_A 130 LSGGELFDRIAAE----DYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLN 202 (387)
T ss_dssp CCCCBHHHHTTCT----TCCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECC
T ss_pred CCCCcHHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccchHHeEEecCCCCceEEEecccceecC
Confidence 9999999988642 345899999999999999999999 789999999999999974 5779999999998765
Q ss_pred CCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhcc
Q 002063 831 NSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLD 910 (973)
Q Consensus 831 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (973)
.... .....||+.|+|||++.+..++.++||||+||++|||++|+.||.... ..............
T Consensus 203 ~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~-----~~~~~~~i~~~~~~------ 268 (387)
T 1kob_A 203 PDEI---VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGED-----DLETLQNVKRCDWE------ 268 (387)
T ss_dssp TTSC---EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSS-----HHHHHHHHHHCCCC------
T ss_pred CCcc---eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCC-----HHHHHHHHHhCCCC------
Confidence 4322 223468999999999999999999999999999999999999997531 11111111111110
Q ss_pred ccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 911 CEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 911 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
............+.+++.+||+.||++|||+.|++++-
T Consensus 269 --~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp 306 (387)
T 1kob_A 269 --FDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHP 306 (387)
T ss_dssp --CCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTST
T ss_pred --CCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCc
Confidence 01111123345688999999999999999999999874
No 117
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1.1e-38 Score=362.17 Aligned_cols=273 Identities=17% Similarity=0.210 Sum_probs=207.4
Q ss_pred hcCCcccCeeccc--CcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEE
Q 002063 675 ICNLEEDNLIGSG--GTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 675 ~~~~~~~~~lG~G--~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
.++|++.+.||+| +||+||+|++..+++.||||++... ...+.+.+|++++++++||||+++++++..++..|+
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 4689999999999 9999999999999999999998753 234567889999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcc
Q 002063 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||+++|+|.+++... ....+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||.+..
T Consensus 104 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~ 177 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTH---FMDGMNELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLS 177 (389)
T ss_dssp EEECCTTCBHHHHHHHT---CTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred EEEccCCCCHHHHHhhh---cccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEccccccee
Confidence 99999999999999864 2345889999999999999999999 78999999999999999999999999999865
Q ss_pred ccCCCCc-----ccccccCccccccccccccc--CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcc
Q 002063 829 AENSPKV-----SDYSCFAGTHGYIAPELAYT--CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNN 901 (973)
Q Consensus 829 ~~~~~~~-----~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~ 901 (973)
....... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||........ ...........
T Consensus 178 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~~ 256 (389)
T 3gni_B 178 MISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM-LLEKLNGTVPC 256 (389)
T ss_dssp CEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTH-HHHC-------
T ss_pred eccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHH-HHHHhcCCCCc
Confidence 4322111 11123468999999999987 6799999999999999999999999976422111 11100000000
Q ss_pred c--------cc-------------chhhcc--------c-cccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH--
Q 002063 902 H--------EN-------------VLKVLD--------C-EVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM-- 949 (973)
Q Consensus 902 ~--------~~-------------~~~~~~--------~-~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~-- 949 (973)
. .. ...... . .............+.+++.+||++||.+|||+.|+++|
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~ 336 (389)
T 3gni_B 257 LLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSF 336 (389)
T ss_dssp -------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGG
T ss_pred cccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHH
Confidence 0 00 000000 0 00001122334668899999999999999999999987
Q ss_pred hhcCC
Q 002063 950 LADAD 954 (973)
Q Consensus 950 L~~~~ 954 (973)
++++.
T Consensus 337 f~~~~ 341 (389)
T 3gni_B 337 FKQIK 341 (389)
T ss_dssp GGGC-
T ss_pred HHHHh
Confidence 44443
No 118
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1e-38 Score=356.06 Aligned_cols=279 Identities=17% Similarity=0.172 Sum_probs=207.9
Q ss_pred hcCCcccCeecccCcEEEEEEEEcC---CCceEEEEEeeccc-------------cHHHHHHHHHHHHhcCCCceeeEeE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKK---NAGTVAVKQLWKGD-------------GVKVFAAEMEILGKIRHRNILKLYA 738 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~---~~~~vavK~~~~~~-------------~~~~~~~E~~~l~~l~hpniv~l~~ 738 (973)
.++|++.+.||+|+||+||+|++.. ++..||||+..... ....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 4579999999999999999999986 68899999887532 1123567888899999999999999
Q ss_pred EEEe----CCeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecC
Q 002063 739 CLLK----GGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE 814 (973)
Q Consensus 739 ~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~ 814 (973)
++.. +...|+||||+ +++|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~ 186 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQN-----GTFKKSTVLQLGIRMLDVLEYIH---ENEYVHGDIKAANLLLGY 186 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGG-----GBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEES
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCcCHHHEEEcc
Confidence 9987 67899999999 99999998753 26899999999999999999999 779999999999999998
Q ss_pred CC--ceEEecccCCccccCCCCc-----ccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCC
Q 002063 815 DY--EPKIADFGVAKIAENSPKV-----SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGD 887 (973)
Q Consensus 815 ~~--~~kl~Dfgl~~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~ 887 (973)
++ .+||+|||+++........ .......||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 187 ~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~ 266 (345)
T 2v62_A 187 KNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKD 266 (345)
T ss_dssp SSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTC
T ss_pred CCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccc
Confidence 87 9999999999876432111 1123457899999999999999999999999999999999999999653222
Q ss_pred CccHHHHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCCCC
Q 002063 888 GKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPCTDKSPDNSSDK 967 (973)
Q Consensus 888 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~~~~~~s~~ 967 (973)
...............+ ........ .......+.+++.+||+.||++||++.+|++.|++......+..-+....
T Consensus 267 ~~~~~~~~~~~~~~~~---~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~d~~~~~~ 340 (345)
T 2v62_A 267 PVAVQTAKTNLLDELP---QSVLKWAP---SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGIPLGPLDFSTKGQ 340 (345)
T ss_dssp HHHHHHHHHHHHHTTT---HHHHHHSC---TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCCCCCCCCCCCTTC
T ss_pred cHHHHHHHHhhccccc---HHHHhhcc---ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCCcccCCCcccCCc
Confidence 2222222111111111 00000000 00234568899999999999999999999999999876554444444333
Q ss_pred C
Q 002063 968 S 968 (973)
Q Consensus 968 ~ 968 (973)
.
T Consensus 341 ~ 341 (345)
T 2v62_A 341 S 341 (345)
T ss_dssp -
T ss_pred c
Confidence 3
No 119
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=8.8e-39 Score=347.24 Aligned_cols=253 Identities=29% Similarity=0.494 Sum_probs=203.3
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc---------cHHHHHHHHHHHHhcCCCceeeEeEEEEeCC
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD---------GVKVFAAEMEILGKIRHRNILKLYACLLKGG 744 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~---------~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~ 744 (973)
..++|++.+.||+|+||+||+|++..+++.||||++.... ..+.+.+|++++++++||||+++++++.+..
T Consensus 17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 96 (287)
T 4f0f_A 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP 96 (287)
T ss_dssp CSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT
T ss_pred hhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC
Confidence 3468899999999999999999999999999999885421 1267889999999999999999999986654
Q ss_pred eeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCC--eEecCCCCCCeeecCCCc-----
Q 002063 745 SSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPP--IIHRDIKSSNILLDEDYE----- 817 (973)
Q Consensus 745 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~--ivH~Dlkp~Nill~~~~~----- 817 (973)
++||||+++|+|.+++... ...+++..+..++.|++.|++||| +.+ ++||||||+||+++.++.
T Consensus 97 --~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~ivH~dikp~Nil~~~~~~~~~~~ 167 (287)
T 4f0f_A 97 --RMVMEFVPCGDLYHRLLDK----AHPIKWSVKLRLMLDIALGIEYMQ---NQNPPIVHRDLRSPNIFLQSLDENAPVC 167 (287)
T ss_dssp --EEEEECCTTCBHHHHHHCT----TSCCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCSCCSGGGEEESCCCTTCSCC
T ss_pred --eEEEEecCCCCHHHHHhcc----cCCccHHHHHHHHHHHHHHHHHHH---hCCCCeecCCCCcceEEEeccCCCCcee
Confidence 7999999999999988753 346899999999999999999999 778 999999999999988776
Q ss_pred eEEecccCCccccCCCCcccccccCccccccccccc--ccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHH
Q 002063 818 PKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELA--YTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWV 895 (973)
Q Consensus 818 ~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~--~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~ 895 (973)
+||+|||+++.... ......||+.|+|||++ ....++.++||||+||++|||++|+.||..............
T Consensus 168 ~kl~Dfg~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~ 242 (287)
T 4f0f_A 168 AKVADFGLSQQSVH-----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMI 242 (287)
T ss_dssp EEECCCTTCBCCSS-----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHH
T ss_pred EEeCCCCccccccc-----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHH
Confidence 99999999974432 22335689999999998 345678999999999999999999999976432211111111
Q ss_pred HHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcC
Q 002063 896 STHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADA 953 (973)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 953 (973)
.. .. ............+.+++.+||+.||++||++.|+++.|+++
T Consensus 243 ~~---~~----------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 243 RE---EG----------LRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp HH---SC----------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred hc---cC----------CCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 11 11 00111123345688999999999999999999999999864
No 120
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.9e-39 Score=356.39 Aligned_cols=257 Identities=23% Similarity=0.314 Sum_probs=201.0
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceE----EEEEeec---cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTV----AVKQLWK---GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSF 747 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~v----avK~~~~---~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 747 (973)
..+|++.+.||+|+||+||+|++..+++.| |+|.+.. ....+.+.+|++++++++||||+++++++..+. .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 457899999999999999999998777665 6665543 345678899999999999999999999988764 78
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCc
Q 002063 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
+|+||+++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++
T Consensus 93 ~v~~~~~~g~L~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~ 165 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREH----KDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK 165 (327)
T ss_dssp EEECCCSSCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTC--
T ss_pred EEEEecCCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHh---hCCCcCCCCCHHHEEEcCCCCEEEccCccee
Confidence 999999999999999864 345889999999999999999999 7899999999999999999999999999998
Q ss_pred cccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccch
Q 002063 828 IAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVL 906 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (973)
...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||.... .......+....
T Consensus 166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~--~~~~~~~~~~~~------- 236 (327)
T 3lzb_A 166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP--ASEISSILEKGE------- 236 (327)
T ss_dssp --------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--GGGHHHHHHTTC-------
T ss_pred EccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCC--HHHHHHHHHcCC-------
Confidence 7754443333344567889999999999999999999999999999999 999997642 222222221110
Q ss_pred hhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002063 907 KVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
....+......+.+++.+||+.||.+||++.|+++.|+++..
T Consensus 237 -------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 278 (327)
T 3lzb_A 237 -------RLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp -------CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred -------CCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 001112234468889999999999999999999999997653
No 121
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=3.5e-39 Score=349.60 Aligned_cols=255 Identities=22% Similarity=0.320 Sum_probs=205.4
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEcc
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
.++|++.+.||+|+||+||+|++.. +..||||++... ...+++.+|++++++++||||+++++++.+++..++||||+
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 101 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 101 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETT-TEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcC-CCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence 4578999999999999999998874 778999998763 35677899999999999999999999999999999999999
Q ss_pred CCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCC
Q 002063 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~ 833 (973)
++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 102 ~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 174 (283)
T 3gen_A 102 ANGCLLNYLREM----RHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 174 (283)
T ss_dssp TTCBHHHHHHCG----GGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHH
T ss_pred CCCcHHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCccceEEEcCCCCEEEccccccccccccc
Confidence 999999999753 235899999999999999999999 7899999999999999999999999999998664321
Q ss_pred CcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhhcccc
Q 002063 834 KVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCE 912 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
. .......+|+.|+|||++.+..++.++||||+|+++|||++ |+.||.... . ............ .
T Consensus 175 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~--~---~~~~~~~~~~~~-------~- 240 (283)
T 3gen_A 175 Y-TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFT--N---SETAEHIAQGLR-------L- 240 (283)
T ss_dssp H-HSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSC--H---HHHHHHHHTTCC-------C-
T ss_pred c-ccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccC--h---hHHHHHHhcccC-------C-
Confidence 1 12223456788999999998899999999999999999998 999997541 1 111111111100 0
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002063 913 VASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 913 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
..+......+.+++.+||+.||++||++.+++++|+++.
T Consensus 241 ---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~ 279 (283)
T 3gen_A 241 ---YRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVM 279 (283)
T ss_dssp ---CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---CCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHh
Confidence 001112346888999999999999999999999998753
No 122
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=4.5e-39 Score=353.71 Aligned_cols=272 Identities=21% Similarity=0.316 Sum_probs=206.2
Q ss_pred CHHHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeec-----cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCe
Q 002063 671 DAEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK-----GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGS 745 (973)
Q Consensus 671 ~~~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~-----~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~ 745 (973)
+.....+|++.+.||+|+||+||+|.+..+++.||||++.. ......+.+|++++++++||||+++++++..++.
T Consensus 27 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 106 (310)
T 2wqm_A 27 GYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNE 106 (310)
T ss_dssp TTSSGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTE
T ss_pred ccccccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCc
Confidence 34456789999999999999999999998899999998864 2345668899999999999999999999999999
Q ss_pred eEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccC
Q 002063 746 SFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGV 825 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl 825 (973)
.++||||+++|+|.+++..... ....+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||+
T Consensus 107 ~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~ 182 (310)
T 2wqm_A 107 LNIVLELADAGDLSRMIKHFKK-QKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGL 182 (310)
T ss_dssp EEEEEECCCSCBHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCC--
T ss_pred EEEEEecCCCCCHHHHHHHhcc-cccCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCcHHHEEEcCCCCEEEEeccc
Confidence 9999999999999999976422 3446889999999999999999999 78999999999999999999999999999
Q ss_pred CccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccc
Q 002063 826 AKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENV 905 (973)
Q Consensus 826 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 905 (973)
+........ ......|++.|+|||++.+..++.++||||||+++|||++|+.||...... ............
T Consensus 183 ~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~~~~--- 254 (310)
T 2wqm_A 183 GRFFSSKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN---LYSLCKKIEQCD--- 254 (310)
T ss_dssp ------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CC---HHHHHHHHHTTC---
T ss_pred eeeecCCCc--cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchh---HHHHHHHhhccc---
Confidence 876543321 122346899999999999999999999999999999999999999754222 111111111110
Q ss_pred hhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCCCCCCC
Q 002063 906 LKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPCTDKSP 961 (973)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~~~ 961 (973)
............+.+++.+||+.||++||++.+++++|+++.+..+.++
T Consensus 255 -------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~~~ 303 (310)
T 2wqm_A 255 -------YPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASSL 303 (310)
T ss_dssp -------SCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC---
T ss_pred -------CCCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhhhh
Confidence 0000111234468899999999999999999999999999876655444
No 123
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.1e-39 Score=352.35 Aligned_cols=256 Identities=33% Similarity=0.504 Sum_probs=200.6
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccC
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMP 754 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 754 (973)
.++|++.+.||+|+||+||+|++. ++.||||++..+...+.+.+|++++++++||||+++++++. +..++||||++
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~ 82 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAE 82 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEET--TEEEEEEECSSTTHHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCT
T ss_pred HhHeeeeeEeecCCCceEEEEEEC--CeeEEEEEecChhHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCC
Confidence 357889999999999999999986 67899999987777788999999999999999999999876 34799999999
Q ss_pred CCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCc-eEEecccCCccccCCC
Q 002063 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYE-PKIADFGVAKIAENSP 833 (973)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~-~kl~Dfgl~~~~~~~~ 833 (973)
+|+|.+++... ...+.+++..+..++.|+++||+|||+...++|+||||||+||+++.++. +||+|||++......
T Consensus 83 ~~~L~~~l~~~--~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~- 159 (307)
T 2eva_A 83 GGSLYNVLHGA--EPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH- 159 (307)
T ss_dssp TCBHHHHHHCS--SSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC--------
T ss_pred CCCHHHHHhcc--CCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc-
Confidence 99999999753 22234788899999999999999999432279999999999999998886 799999999755432
Q ss_pred CcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccc
Q 002063 834 KVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEV 913 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (973)
.....||+.|+|||++.+..++.++||||||+++|||++|+.||............ ........
T Consensus 160 ----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~--~~~~~~~~---------- 223 (307)
T 2eva_A 160 ----MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMW--AVHNGTRP---------- 223 (307)
T ss_dssp ---------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHH--HHHTTCCC----------
T ss_pred ----cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHH--HHhcCCCC----------
Confidence 12345899999999999999999999999999999999999999754221111111 11110010
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002063 914 ASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 914 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
.........+.+++.+||+.||++||++.+++++|+.+..
T Consensus 224 --~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 263 (307)
T 2eva_A 224 --PLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR 263 (307)
T ss_dssp --CCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGG
T ss_pred --CcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 1111234468889999999999999999999999987654
No 124
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.9e-38 Score=359.95 Aligned_cols=273 Identities=23% Similarity=0.328 Sum_probs=198.2
Q ss_pred cCHHHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeec----cccHHHHHHHHHHHHhcC-CCceeeEeEEEEeCC
Q 002063 670 IDAEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK----GDGVKVFAAEMEILGKIR-HRNILKLYACLLKGG 744 (973)
Q Consensus 670 ~~~~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~----~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~ 744 (973)
++.....+|++.+.||+|+||+||+|.+..+++.||||++.. ......+.+|+.+++++. ||||+++++++..++
T Consensus 3 v~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~ 82 (388)
T 3oz6_A 3 VDRHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADN 82 (388)
T ss_dssp -CHHHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTT
T ss_pred ccCcccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCC
Confidence 446677899999999999999999999999999999998854 234566789999999997 999999999997644
Q ss_pred --eeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEec
Q 002063 745 --SSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIAD 822 (973)
Q Consensus 745 --~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 822 (973)
..|+||||++ |+|.+++... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|
T Consensus 83 ~~~~~lv~e~~~-~~L~~~~~~~------~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~D 152 (388)
T 3oz6_A 83 DRDVYLVFDYME-TDLHAVIRAN------ILEPVHKQYVVYQLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVAD 152 (388)
T ss_dssp SSCEEEEEECCS-EEHHHHHHHT------CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECC
T ss_pred CCEEEEEecccC-cCHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHeEEcCCCCEEecC
Confidence 6899999996 6999988753 5788899999999999999999 78999999999999999999999999
Q ss_pred ccCCccccCCCC-------------------cccccccCccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCC
Q 002063 823 FGVAKIAENSPK-------------------VSDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVE 882 (973)
Q Consensus 823 fgl~~~~~~~~~-------------------~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~ell~g~~pf~ 882 (973)
||+++....... .......+||+.|+|||++.+ ..++.++||||+||++|||++|+.||.
T Consensus 153 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~ 232 (388)
T 3oz6_A 153 FGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFP 232 (388)
T ss_dssp CTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred CcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCC
Confidence 999986543111 112234579999999999876 678999999999999999999999997
Q ss_pred cccCCCccHHHHHHHhhccccc--chh--------hc----------cccccChh------------hHHHHHHHHHHHH
Q 002063 883 EEYGDGKDIVYWVSTHLNNHEN--VLK--------VL----------DCEVASES------------IKEDMIKLLKIAV 930 (973)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~~~~~--~~~--------~~----------~~~~~~~~------------~~~~~~~l~~l~~ 930 (973)
... ..+....+......... +.. .. ........ .......+.+++.
T Consensus 233 ~~~--~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~ 310 (388)
T 3oz6_A 233 GSS--TMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLD 310 (388)
T ss_dssp CSS--HHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHH
T ss_pred CCC--HHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHH
Confidence 541 11111111110000000 000 00 00000000 0022356889999
Q ss_pred HhcCCCCCCCCCHHHHHHH--hhcCC
Q 002063 931 VCTTKLPNLRPPMREVVKM--LADAD 954 (973)
Q Consensus 931 ~cl~~dP~~Rpt~~evl~~--L~~~~ 954 (973)
+||+.||++|||+.|+++| +....
T Consensus 311 ~~L~~dP~~R~t~~e~l~Hp~~~~~~ 336 (388)
T 3oz6_A 311 KLLQFNPNKRISANDALKHPFVSIFH 336 (388)
T ss_dssp HHCCSSGGGSCCHHHHTTSTTTTTTC
T ss_pred HhhccCcccCCCHHHHhCCHHHHHhc
Confidence 9999999999999999998 44443
No 125
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=3.8e-39 Score=372.88 Aligned_cols=259 Identities=26% Similarity=0.396 Sum_probs=209.8
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeec-cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEcc
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK-GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~-~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
.++|++.+.||+|+||+||+|++.. +..||||++.. ....+.+.+|++++++++||||+++++++. ++..|+||||+
T Consensus 187 ~~~~~~~~~lG~G~fg~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~ 264 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFGEVWMATYNK-HTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFM 264 (454)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETT-TEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCC
T ss_pred hHHeEEEEEcccCCceEEEEEEECC-ccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeec
Confidence 4577889999999999999999875 67899999876 345778999999999999999999999886 66789999999
Q ss_pred CCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCC
Q 002063 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~ 833 (973)
++|+|.++++... ...+++..+..++.|++.||+||| +++|+||||||+|||++.++.+||+|||+++......
T Consensus 265 ~~g~L~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~ 338 (454)
T 1qcf_A 265 AKGSLLDFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE 338 (454)
T ss_dssp TTCBHHHHHHSHH---HHTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHH
T ss_pred CCCcHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCc
Confidence 9999999997542 224788899999999999999999 7899999999999999999999999999998664321
Q ss_pred CcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhhcccc
Q 002063 834 KVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCE 912 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
. .......++..|+|||++.+..++.++|||||||++|||++ |+.||.... .......+... .
T Consensus 339 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~--~~~~~~~i~~~---~---------- 402 (454)
T 1qcf_A 339 Y-TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS--NPEVIRALERG---Y---------- 402 (454)
T ss_dssp H-HTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--HHHHHHHHHHT---C----------
T ss_pred e-eccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCC--HHHHHHHHHcC---C----------
Confidence 1 11223446789999999998999999999999999999999 999997531 11111111111 0
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCCCC
Q 002063 913 VASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPCTD 958 (973)
Q Consensus 913 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~~ 958 (973)
....+...+..+.+++.+||+.||++|||+.+|++.|+++.....
T Consensus 403 -~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~~ 447 (454)
T 1qcf_A 403 -RMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATE 447 (454)
T ss_dssp -CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSSC
T ss_pred -CCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhccc
Confidence 001112334568899999999999999999999999999876543
No 126
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=5.5e-39 Score=345.74 Aligned_cols=249 Identities=31% Similarity=0.411 Sum_probs=193.3
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc------ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG------DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~------~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
..+|++.+.||+|+||+||+|++. ++.||||++... ...+.+.+|+++++.++||||+++++++..++..++
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCL 83 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEE
Confidence 468899999999999999999986 789999987652 234678899999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCC---eEecCCCCCCeeecC--------CCc
Q 002063 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPP---IIHRDIKSSNILLDE--------DYE 817 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~---ivH~Dlkp~Nill~~--------~~~ 817 (973)
||||+++++|.+++.. ..+++..+..++.|+++|++||| +.+ |+||||||+||+++. ++.
T Consensus 84 v~e~~~~~~L~~~~~~------~~~~~~~~~~i~~~l~~~l~~lH---~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~ 154 (271)
T 3dtc_A 84 VMEFARGGPLNRVLSG------KRIPPDILVNWAVQIARGMNYLH---DEAIVPIIHRDLKSSNILILQKVENGDLSNKI 154 (271)
T ss_dssp EEECCTTEEHHHHHTS------SCCCHHHHHHHHHHHHHHHHHHH---HSSSSCCCCSCCSGGGEEESSCCSSSCCSSCC
T ss_pred EEEcCCCCCHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHH---hCCCCceeecCCchHHEEEecccccccccCcc
Confidence 9999999999998852 35889999999999999999999 555 999999999999986 678
Q ss_pred eEEecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHH
Q 002063 818 PKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVST 897 (973)
Q Consensus 818 ~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~ 897 (973)
+||+|||.+........ ....||+.|+|||++.+..++.++||||+|+++|+|++|+.||.... .......
T Consensus 155 ~kl~Dfg~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-----~~~~~~~ 225 (271)
T 3dtc_A 155 LKITDFGLAREWHRTTK----MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGID-----GLAVAYG 225 (271)
T ss_dssp EEECCCCC-----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSC-----HHHHHHH
T ss_pred eEEccCCcccccccccc----cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHh
Confidence 99999999986543322 23468999999999999999999999999999999999999997541 1111111
Q ss_pred hhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcC
Q 002063 898 HLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADA 953 (973)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 953 (973)
..... ............+.+++.+||+.||++||++.|++++|+++
T Consensus 226 ~~~~~----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 226 VAMNK----------LALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp HHTSC----------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred hhcCC----------CCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 11110 00111122345688999999999999999999999999864
No 127
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1.3e-38 Score=351.59 Aligned_cols=252 Identities=24% Similarity=0.289 Sum_probs=186.0
Q ss_pred cCeecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHhcC-CCceeeEeEEEEeCCeeEEEEEccCCCchH
Q 002063 681 DNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIR-HRNILKLYACLLKGGSSFLVLEYMPNGNLF 759 (973)
Q Consensus 681 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lv~e~~~~gsL~ 759 (973)
.+.||+|+||+||+|++..+++.||||++... ....+.+|+++++.+. ||||+++++++.++...|+||||+++|+|.
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 94 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR-MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELF 94 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG-GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh-hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcHH
Confidence 37899999999999999999999999998654 3456789999999997 999999999999999999999999999999
Q ss_pred HHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCC---ceEEecccCCccccCCCCcc
Q 002063 760 QALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDY---EPKIADFGVAKIAENSPKVS 836 (973)
Q Consensus 760 ~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~---~~kl~Dfgl~~~~~~~~~~~ 836 (973)
+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++ .+||+|||+++.......
T Consensus 95 ~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~-- 164 (325)
T 3kn6_A 95 ERIKKK-----KHFSETEASYIMRKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ-- 164 (325)
T ss_dssp HHHHHC-----SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-----
T ss_pred HHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC--
Confidence 999753 45899999999999999999999 78999999999999998766 799999999986543322
Q ss_pred cccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCC--CccHHHHHHHhhcccccchhhcccccc
Q 002063 837 DYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGD--GKDIVYWVSTHLNNHENVLKVLDCEVA 914 (973)
Q Consensus 837 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (973)
......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ............... ....
T Consensus 165 ~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~--------~~~~ 236 (325)
T 3kn6_A 165 PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGD--------FSFE 236 (325)
T ss_dssp -------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTC--------CCCC
T ss_pred cccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCC--------CCCC
Confidence 223456899999999999999999999999999999999999999764221 111122222111111 1112
Q ss_pred ChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 915 SESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 915 ~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
..........+.+++.+||+.||.+|||+.|++++-.
T Consensus 237 ~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w 273 (325)
T 3kn6_A 237 GEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEW 273 (325)
T ss_dssp SHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGG
T ss_pred cccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChh
Confidence 2223344567889999999999999999999987644
No 128
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=6.4e-39 Score=356.27 Aligned_cols=262 Identities=27% Similarity=0.387 Sum_probs=210.3
Q ss_pred hcCCcccCeecccCcEEEEEEEEc-------CCCceEEEEEeecc---ccHHHHHHHHHHHHhc-CCCceeeEeEEEEeC
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLK-------KNAGTVAVKQLWKG---DGVKVFAAEMEILGKI-RHRNILKLYACLLKG 743 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~-------~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~ 743 (973)
.++|++.+.||+|+||+||+|++. .+++.||||++... ...+.+.+|+++++++ +||||+++++++..+
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 357899999999999999999985 34678999998763 3446688999999999 899999999999999
Q ss_pred CeeEEEEEccCCCchHHHHHhhhcC-----------CCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeee
Q 002063 744 GSSFLVLEYMPNGNLFQALHKRVKE-----------GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILL 812 (973)
Q Consensus 744 ~~~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill 812 (973)
+..|+||||+++|+|.+++...... ....+++..+..++.|+++||+||| +.+|+||||||+||++
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCccceEEE
Confidence 9999999999999999999864211 1234889999999999999999999 7899999999999999
Q ss_pred cCCCceEEecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccH
Q 002063 813 DEDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDI 891 (973)
Q Consensus 813 ~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~ 891 (973)
+.++.+||+|||+++...............+|+.|+|||++.+..++.++||||||+++|||++ |+.||.... .
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~-----~ 265 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP-----V 265 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC-----H
T ss_pred cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCC-----H
Confidence 9999999999999987755443333344567889999999998889999999999999999999 999996531 1
Q ss_pred HHHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002063 892 VYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
............ ..........+.+++.+||+.||.+||++.|++++|+++..
T Consensus 266 ~~~~~~~~~~~~-----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~ 318 (334)
T 2pvf_A 266 EELFKLLKEGHR-----------MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318 (334)
T ss_dssp HHHHHHHHHTCC-----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCC-----------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 111111111100 00112234568899999999999999999999999998754
No 129
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=5.2e-39 Score=349.28 Aligned_cols=258 Identities=26% Similarity=0.347 Sum_probs=213.6
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEc
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 752 (973)
...+|++.+.||+|+||+||+|.+..++..||||++... ...+.+.+|++++++++||||+++++++..++..++||||
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 90 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 90 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEc
Confidence 356789999999999999999999998999999998764 3557789999999999999999999999999999999999
Q ss_pred cCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCC
Q 002063 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENS 832 (973)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~ 832 (973)
+++++|.+++... ....+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||.+......
T Consensus 91 ~~~~~L~~~~~~~---~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 164 (288)
T 3kfa_A 91 MTYGNLLDYLREC---NRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164 (288)
T ss_dssp CTTEEHHHHHHHC---CTTTSCHHHHHHHHHHHHHHHHHHH---HHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSS
T ss_pred CCCCcHHHHHHhc---ccCCccHhHHHHHHHHHHHHHHHHH---HCCccCCCCCcceEEEcCCCCEEEccCccceeccCC
Confidence 9999999999763 3456899999999999999999999 679999999999999999999999999999866543
Q ss_pred CCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhhccc
Q 002063 833 PKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDC 911 (973)
Q Consensus 833 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (973)
.. .......+|+.|+|||++.+..++.++||||+|+++|+|++ |..||.... .......+...
T Consensus 165 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~--~~~~~~~~~~~------------- 228 (288)
T 3kfa_A 165 TY-TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID--LSQVYELLEKD------------- 228 (288)
T ss_dssp SS-EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--GGGHHHHHHTT-------------
T ss_pred cc-ccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHhcc-------------
Confidence 22 22233456789999999998999999999999999999999 999997542 22222221111
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002063 912 EVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 912 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
.....+......+.+++.+|++.||.+||++.++++.|+.+.
T Consensus 229 -~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~ 270 (288)
T 3kfa_A 229 -YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 270 (288)
T ss_dssp -CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -CCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHH
Confidence 001111223456889999999999999999999999998653
No 130
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=9.7e-39 Score=346.98 Aligned_cols=262 Identities=25% Similarity=0.299 Sum_probs=198.8
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 751 (973)
++|++.+.||+|+||+||+|++ .+++.||||++... ...+.+.+|++++++++||||+++++++..++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFE 80 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEE
Confidence 5789999999999999999998 56889999998652 234678899999999999999999999999999999999
Q ss_pred ccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccC
Q 002063 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~ 831 (973)
|+++ +|.+++... ...+++..+..++.|+++||+||| +++|+||||||+||+++.++.+||+|||+++....
T Consensus 81 ~~~~-~l~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 152 (288)
T 1ob3_A 81 HLDQ-DLKKLLDVC----EGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGI 152 (288)
T ss_dssp CCSE-EHHHHHHTS----TTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC
T ss_pred ecCC-CHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEeECccccccCc
Confidence 9975 999988753 345889999999999999999999 78999999999999999999999999999986643
Q ss_pred CCCcccccccCcccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccc--cchh-
Q 002063 832 SPKVSDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHE--NVLK- 907 (973)
Q Consensus 832 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~- 907 (973)
... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||.... ..+....+........ ....
T Consensus 153 ~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 228 (288)
T 1ob3_A 153 PVR--KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVS--EADQLMRIFRILGTPNSKNWPNV 228 (288)
T ss_dssp -----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCCCCTTTSTTG
T ss_pred ccc--ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHHCCCChhhchhh
Confidence 221 22334689999999998764 58999999999999999999999997541 1111111111100000 0000
Q ss_pred ----hccccc-------cChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 908 ----VLDCEV-------ASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 908 ----~~~~~~-------~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
..++.. ...........+.+++.+||+.||++|||+.|+++|-
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp 282 (288)
T 1ob3_A 229 TELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHA 282 (288)
T ss_dssp GGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSG
T ss_pred hcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCc
Confidence 000000 0011122345678999999999999999999999763
No 131
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=1.3e-38 Score=371.48 Aligned_cols=253 Identities=25% Similarity=0.290 Sum_probs=208.8
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 749 (973)
.++|++.+.||+|+||+||+|++..+++.||||++.+. .....+.+|++++++++||||+++++++.+++..|+|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 45788999999999999999999999999999998652 3456688999999999999999999999999999999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccc
Q 002063 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
|||+++|+|.+++... ....+++..+..++.||+.||+||| +++|+||||||+||+++.+|.+||+|||+++..
T Consensus 263 mEy~~gg~L~~~l~~~---~~~~l~e~~~~~i~~qIl~aL~yLH---~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~ 336 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHM---GQAGFPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHV 336 (576)
T ss_dssp ECCCCSCBHHHHHHSS---SSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEcCCCCcHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCchheEEEeCCCCeEEEecccceec
Confidence 9999999999999753 2345899999999999999999999 789999999999999999999999999999876
Q ss_pred cCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhc
Q 002063 830 ENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVL 909 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
..... .....||+.|+|||++.+..++.++||||+||++|||++|+.||....... ..............
T Consensus 337 ~~~~~---~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~-~~~~i~~~i~~~~~------ 406 (576)
T 2acx_A 337 PEGQT---IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI-KREEVERLVKEVPE------ 406 (576)
T ss_dssp CTTCC---EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCC-CHHHHHHHHHHCCC------
T ss_pred ccCcc---ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccch-hHHHHHHHhhcccc------
Confidence 54322 233579999999999999899999999999999999999999997643211 11111111111111
Q ss_pred cccccChhhHHHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHH
Q 002063 910 DCEVASESIKEDMIKLLKIAVVCTTKLPNLRP-----PMREVVKM 949 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----t~~evl~~ 949 (973)
. .+......+.+++.+||+.||.+|| ++.|+++|
T Consensus 407 --~----~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 407 --E----YSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp --C----CCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred --c----CCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 0 1112345688999999999999999 78999876
No 132
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=8.8e-39 Score=352.63 Aligned_cols=267 Identities=23% Similarity=0.322 Sum_probs=210.0
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeec--cccHHHHHHHHHHHHhcCCCceeeEeEEEEe----CCeeEE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK--GDGVKVFAAEMEILGKIRHRNILKLYACLLK----GGSSFL 748 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~--~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~----~~~~~l 748 (973)
.++|++.+.||+|+||+||+|++..+++.||||++.. ....+.+.+|++++++++||||+++++++.. ....++
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 4579999999999999999999998899999998765 3445678899999999999999999999863 347899
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcc
Q 002063 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||+++|+|.+++.... .....+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||.+..
T Consensus 108 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~ 183 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLK-DKGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQ 183 (317)
T ss_dssp EEECCTTCBHHHHHHHHH-TTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred EEEeCCCCcHHHHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCCEEEEecCcchh
Confidence 999999999999998742 33456899999999999999999999 77999999999999999999999999999875
Q ss_pred ccCCCCcc-------cccccCcccccccccccccCC---CCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHh
Q 002063 829 AENSPKVS-------DYSCFAGTHGYIAPELAYTCK---VSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTH 898 (973)
Q Consensus 829 ~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~ 898 (973)
........ ......||+.|+|||++.+.. ++.++||||||+++|||++|+.||.................
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~ 263 (317)
T 2buj_A 184 ACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQ 263 (317)
T ss_dssp SCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHCC
T ss_pred cccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhcc
Confidence 53211100 112245799999999987554 68899999999999999999999965322222222221110
Q ss_pred hcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCCCCC
Q 002063 899 LNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPCTDK 959 (973)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~ 959 (973)
. ...........+.+++.+||+.||.+||++.+++++|+.+.+....
T Consensus 264 ~--------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~~ 310 (317)
T 2buj_A 264 L--------------SIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPG 310 (317)
T ss_dssp ----------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCCC
T ss_pred C--------------CCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCCC
Confidence 0 0000112345688999999999999999999999999999865543
No 133
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.1e-38 Score=359.10 Aligned_cols=257 Identities=22% Similarity=0.206 Sum_probs=205.6
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEE
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
..++|++.+.||+|+||+||+|+++.+++.||||++.+. ...+.+.+|.+++..++||||+++++++.+++..|+
T Consensus 59 ~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~l 138 (412)
T 2vd5_A 59 QRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYL 138 (412)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEE
T ss_pred ChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEE
Confidence 356899999999999999999999999999999998752 233457899999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcc
Q 002063 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||+++|+|.+++.+. ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 139 VmE~~~gg~L~~~l~~~----~~~l~~~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILld~~g~vkL~DFGla~~ 211 (412)
T 2vd5_A 139 VMEYYVGGDLLTLLSKF----GERIPAEMARFYLAEIVMAIDSVH---RLGYVHRDIKPDNILLDRCGHIRLADFGSCLK 211 (412)
T ss_dssp EECCCCSCBHHHHHHHH----SSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEcCCCCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccCHHHeeecCCCCEEEeechhhee
Confidence 99999999999999864 235889999999999999999999 78999999999999999999999999999987
Q ss_pred ccCCCCcccccccCcccccccccccc-------cCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcc
Q 002063 829 AENSPKVSDYSCFAGTHGYIAPELAY-------TCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNN 901 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~ 901 (973)
...... .......||+.|+|||++. +..++.++|||||||++|||++|+.||.... ...........
T Consensus 212 ~~~~~~-~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~-----~~~~~~~i~~~ 285 (412)
T 2vd5_A 212 LRADGT-VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADS-----TAETYGKIVHY 285 (412)
T ss_dssp CCTTSC-EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHHHTH
T ss_pred ccCCCc-cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCC-----HHHHHHHHHhc
Confidence 654322 1223357999999999987 3568999999999999999999999996531 11111111111
Q ss_pred cccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCC---CCHHHHHHHhh
Q 002063 902 HENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLR---PPMREVVKMLA 951 (973)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R---pt~~evl~~L~ 951 (973)
... ...+ .........+.+++.+|+. +|.+| |++.|+++|-.
T Consensus 286 ~~~---~~~p----~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpf 330 (412)
T 2vd5_A 286 KEH---LSLP----LVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPF 330 (412)
T ss_dssp HHH---CCCC--------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGG
T ss_pred ccC---cCCC----ccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCC
Confidence 000 0000 0112234568899999999 99998 69999988743
No 134
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=3.5e-38 Score=341.95 Aligned_cols=252 Identities=25% Similarity=0.310 Sum_probs=206.1
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 750 (973)
.++|++.+.||+|+||+||+|.+..+++.||+|++... ...+.+.+|++++++++||||+++++++..++..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 46899999999999999999999999999999998653 23466789999999999999999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCc---eEEecccCCc
Q 002063 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYE---PKIADFGVAK 827 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~---~kl~Dfgl~~ 827 (973)
||+++++|.+++... ..+++..+..++.|++.|++||| +.+++||||||+||+++.++. +||+|||.+.
T Consensus 85 e~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~ 156 (284)
T 3kk8_A 85 DLVTGGELFEDIVAR-----EFYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAI 156 (284)
T ss_dssp CCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred ecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeE
Confidence 999999999998764 35889999999999999999999 789999999999999987655 9999999997
Q ss_pred cccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchh
Q 002063 828 IAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLK 907 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
....... .....||+.|+|||++.+..++.++||||+|+++|+|++|+.||.... ..............
T Consensus 157 ~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~-----~~~~~~~~~~~~~~--- 225 (284)
T 3kk8_A 157 EVNDSEA---WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED-----QHRLYAQIKAGAYD--- 225 (284)
T ss_dssp ECCSSCB---CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHTCCC---
T ss_pred EcccCcc---ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCc-----hhHHHHHHHhcccc---
Confidence 6654322 233568999999999999999999999999999999999999996531 11111111111100
Q ss_pred hccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 908 VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
............+.+++.+|+++||++|||+.|++++-
T Consensus 226 -----~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~ 263 (284)
T 3kk8_A 226 -----YPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVP 263 (284)
T ss_dssp -----CCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSH
T ss_pred -----CCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcCc
Confidence 00011122345688999999999999999999999863
No 135
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.6e-38 Score=357.16 Aligned_cols=247 Identities=23% Similarity=0.316 Sum_probs=198.2
Q ss_pred ccCeecccCcEEEEEEEEcCCCceEEEEEeecc--ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccCCCc
Q 002063 680 EDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPNGN 757 (973)
Q Consensus 680 ~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~gs 757 (973)
..+.||+|+||+||+|++..+++.||||++... ...+.+.+|++++++++||||+++++++..++..++||||+++|+
T Consensus 93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~ 172 (373)
T 2x4f_A 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGE 172 (373)
T ss_dssp EEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCE
T ss_pred cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCc
Confidence 357899999999999999999999999998763 355678999999999999999999999999999999999999999
Q ss_pred hHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeee--cCCCceEEecccCCccccCCCCc
Q 002063 758 LFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILL--DEDYEPKIADFGVAKIAENSPKV 835 (973)
Q Consensus 758 L~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill--~~~~~~kl~Dfgl~~~~~~~~~~ 835 (973)
|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||+++.......
T Consensus 173 L~~~l~~~----~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~- 244 (373)
T 2x4f_A 173 LFDRIIDE----SYNLTELDTILFMKQICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK- 244 (373)
T ss_dssp EHHHHHHT----GGGCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB-
T ss_pred HHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc-
Confidence 99998753 235889999999999999999999 7899999999999999 5678899999999987654322
Q ss_pred ccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccccC
Q 002063 836 SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVAS 915 (973)
Q Consensus 836 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (973)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.... .............. ...
T Consensus 245 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~-----~~~~~~~i~~~~~~--------~~~ 309 (373)
T 2x4f_A 245 --LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDN-----DAETLNNILACRWD--------LED 309 (373)
T ss_dssp --CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHHHHTCCC--------SCS
T ss_pred --cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhccCC--------CCh
Confidence 223468999999999998899999999999999999999999996541 11121211111110 011
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 916 ESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 916 ~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
.........+.+++.+||+.||.+||++.|++++
T Consensus 310 ~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~h 343 (373)
T 2x4f_A 310 EEFQDISEEAKEFISKLLIKEKSWRISASEALKH 343 (373)
T ss_dssp GGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred hhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 1122334568899999999999999999999985
No 136
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1.6e-38 Score=343.13 Aligned_cols=255 Identities=26% Similarity=0.352 Sum_probs=208.7
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEE
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 750 (973)
..++|++.+.||+|+||+||+|++..+++.||||++... ...+.+.+|+++++.++||||+++++++.+++..|+||
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEE
Confidence 456899999999999999999999988999999998653 34567889999999999999999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcccc
Q 002063 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~ 830 (973)
||+++++|.+++.. ...+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||.+....
T Consensus 85 e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 156 (276)
T 2yex_A 85 EYCSGGELFDRIEP-----DIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFR 156 (276)
T ss_dssp ECCTTEEGGGGSBT-----TTBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECE
T ss_pred EecCCCcHHHHHhh-----ccCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCChHHEEEccCCCEEEeeCCCccccC
Confidence 99999999988753 345889999999999999999999 7899999999999999999999999999998665
Q ss_pred CCCCcccccccCcccccccccccccCCC-CccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhc
Q 002063 831 NSPKVSDYSCFAGTHGYIAPELAYTCKV-SEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVL 909 (973)
Q Consensus 831 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
............|++.|+|||++.+..+ +.++||||+|+++|||++|+.||............+.. ....
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~----~~~~----- 227 (276)
T 2yex_A 157 YNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE----KKTY----- 227 (276)
T ss_dssp ETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHT----TCTT-----
T ss_pred CCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhh----cccc-----
Confidence 4333223344578999999999987765 67899999999999999999999765332222222211 1000
Q ss_pred cccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 910 DCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
..........+.+++.+||+.||.+|||+.|++++-
T Consensus 228 -----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~ 263 (276)
T 2yex_A 228 -----LNPWKKIDSAPLALLHKILVENPSARITIPDIKKDR 263 (276)
T ss_dssp -----STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCT
T ss_pred -----cCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCc
Confidence 001122344678899999999999999999998763
No 137
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=2.4e-38 Score=347.45 Aligned_cols=267 Identities=21% Similarity=0.216 Sum_probs=202.0
Q ss_pred HHHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc-------cHHHHHHHHHHHHhcC---CCceeeEeEEEE
Q 002063 672 AEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-------GVKVFAAEMEILGKIR---HRNILKLYACLL 741 (973)
Q Consensus 672 ~~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~-------~~~~~~~E~~~l~~l~---hpniv~l~~~~~ 741 (973)
....++|++.+.||+|+||+||+|++..+++.||||++.... ....+.+|++++++++ ||||+++++++.
T Consensus 5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~ 84 (308)
T 3g33_A 5 SMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCA 84 (308)
T ss_dssp -----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEE
T ss_pred cccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeee
Confidence 445679999999999999999999999999999999986421 2346678888877764 999999999998
Q ss_pred eCC-----eeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCC
Q 002063 742 KGG-----SSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDY 816 (973)
Q Consensus 742 ~~~-----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~ 816 (973)
... ..++||||++ |+|.+++... ....+++..+..++.|++.||+||| +.+|+||||||+||+++.++
T Consensus 85 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~ 157 (308)
T 3g33_A 85 TSRTDREIKVTLVFEHVD-QDLRTYLDKA---PPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGG 157 (308)
T ss_dssp ECCSSSEEEEEEEEECCC-CBHHHHHHTC---CTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCTTTEEECTTS
T ss_pred ccCCCCceeEEEEehhhh-cCHHHHHhhc---cCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCC
Confidence 755 5799999996 6999999753 3344899999999999999999999 78999999999999999999
Q ss_pred ceEEecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHH
Q 002063 817 EPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVS 896 (973)
Q Consensus 817 ~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~ 896 (973)
.+||+|||+++...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.... ..+....+.
T Consensus 158 ~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~--~~~~~~~i~ 232 (308)
T 3g33_A 158 TVKLADFGLARIYSYQM---ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNS--EADQLGKIF 232 (308)
T ss_dssp CEEECSCSCTTTSTTCC---CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSS--HHHHHHHHH
T ss_pred CEEEeeCccccccCCCc---ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHH
Confidence 99999999998664332 2234568999999999999999999999999999999999999996541 111111111
Q ss_pred Hhhccccc--chh-------hcccc---ccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 897 THLNNHEN--VLK-------VLDCE---VASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 897 ~~~~~~~~--~~~-------~~~~~---~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
........ ... .+... .......+....+.+++.+|+++||++|||+.|+++|-
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~ 298 (308)
T 3g33_A 233 DLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHS 298 (308)
T ss_dssp HHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTST
T ss_pred HHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCc
Confidence 11110000 000 00000 00001123345688999999999999999999999864
No 138
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.6e-38 Score=361.28 Aligned_cols=272 Identities=23% Similarity=0.284 Sum_probs=213.4
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCC--eeEEEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGG--SSFLVL 750 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~--~~~lv~ 750 (973)
.+|++.+.||+|+||+||+|++..+++.||||++... ...+.+.+|++++++++||||+++++++...+ ..++||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 5789999999999999999999999999999998752 34567889999999999999999999998755 789999
Q ss_pred EccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeee----cCCCceEEecccCC
Q 002063 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILL----DEDYEPKIADFGVA 826 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill----~~~~~~kl~Dfgl~ 826 (973)
||+++|+|.+++.... ....+++..+..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||++
T Consensus 89 e~~~~g~L~~~l~~~~--~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a 163 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPS--NAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (396)
T ss_dssp CCCTTEEHHHHTTSGG--GTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEECTTSCEEEEECCGGGC
T ss_pred ecCCCCCHHHHHHhhh--cccCCCHHHHHHHHHHHHHHHHHHH---HCCEEECCcCHHHEEEeecCCCceeEEEecCCCc
Confidence 9999999999997542 2233899999999999999999999 7899999999999999 77778999999999
Q ss_pred ccccCCCCcccccccCccccccccccccc--------CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHh
Q 002063 827 KIAENSPKVSDYSCFAGTHGYIAPELAYT--------CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTH 898 (973)
Q Consensus 827 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~ 898 (973)
+...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||............+....
T Consensus 164 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~ 240 (396)
T 4eut_A 164 RELEDDE---QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKII 240 (396)
T ss_dssp EECCCGG---GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHH
T ss_pred eEccCCC---ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHh
Confidence 8664332 2234568999999999865 5678899999999999999999999976433222222221111
Q ss_pred hcccccc----hhhc--------cccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002063 899 LNNHENV----LKVL--------DCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 899 ~~~~~~~----~~~~--------~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
....... .... +..............+.+++.+||++||++||++.++++.++++..
T Consensus 241 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~ 309 (396)
T 4eut_A 241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (396)
T ss_dssp HSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHT
T ss_pred cCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhh
Confidence 1111000 0000 0011112235677788999999999999999999999999987643
No 139
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=6.6e-39 Score=346.98 Aligned_cols=255 Identities=25% Similarity=0.297 Sum_probs=195.5
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCC---CceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKN---AGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~---~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
.++|++.+.||+|+||+||+|++..+ +..||||+.... ...+.+.+|+.++++++||||+++++++. ++..|+
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~l 92 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 92 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEE
Confidence 45789999999999999999998643 457999987653 33456889999999999999999999874 567899
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcc
Q 002063 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||+++|+|.+++... ...+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||+++.
T Consensus 93 v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 165 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVR----KYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY 165 (281)
T ss_dssp EEECCTTEEHHHHHHHT----TTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC------
T ss_pred EEecCCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHEEECCCCCEEECccccccc
Confidence 99999999999999753 335889999999999999999999 78999999999999999999999999999987
Q ss_pred ccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchh
Q 002063 829 AENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLK 907 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
...... .......+++.|+|||++.+..++.++||||+|+++|||++ |..||.... ..+....+... ..
T Consensus 166 ~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~--~~~~~~~i~~~---~~---- 235 (281)
T 1mp8_A 166 MEDSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK--NNDVIGRIENG---ER---- 235 (281)
T ss_dssp --------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCC--GGGHHHHHHTT---CC----
T ss_pred cCcccc-cccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCC--HHHHHHHHHcC---CC----
Confidence 654322 12223456789999999998899999999999999999997 999997542 22222221111 00
Q ss_pred hccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002063 908 VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
...+......+.+++.+||+.||++||++.|++++|+++.
T Consensus 236 -------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 275 (281)
T 1mp8_A 236 -------LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 275 (281)
T ss_dssp -------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 0011223456889999999999999999999999998753
No 140
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=3.9e-38 Score=340.22 Aligned_cols=250 Identities=23% Similarity=0.270 Sum_probs=205.6
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeec--cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEc
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK--GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~--~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 752 (973)
.++|++.+.||+|+||+||+|++..++..||+|++.. ....+.+.+|++++++++||||+++++++..++..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 87 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence 4578999999999999999999999999999999876 34567899999999999999999999999999999999999
Q ss_pred cCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeee---cCCCceEEecccCCccc
Q 002063 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILL---DEDYEPKIADFGVAKIA 829 (973)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill---~~~~~~kl~Dfgl~~~~ 829 (973)
+++++|.+++... ..+++..+..++.|++.||+||| +.+++||||||+||++ +.++.+||+|||++...
T Consensus 88 ~~~~~L~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~ 159 (277)
T 3f3z_A 88 CTGGELFERVVHK-----RVFRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 159 (277)
T ss_dssp CCSCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred cCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEecCCCCCcEEEEecccceec
Confidence 9999999998764 34789999999999999999999 7899999999999999 78889999999999876
Q ss_pred cCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhc
Q 002063 830 ENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVL 909 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
.... ......||+.|+|||++.+. ++.++||||+|+++|||++|+.||.... ..............
T Consensus 160 ~~~~---~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~----- 225 (277)
T 3f3z_A 160 KPGK---MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPT-----DSEVMLKIREGTFT----- 225 (277)
T ss_dssp CTTS---CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHCCCC-----
T ss_pred cCcc---chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHhCCCC-----
Confidence 5432 22335689999999998654 8999999999999999999999997541 11111111111100
Q ss_pred cccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 910 DCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
............+.+++.+|++.||++||++.+++++
T Consensus 226 ---~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 226 ---FPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp ---CCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred ---CCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0001111234568899999999999999999999875
No 141
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=3.3e-39 Score=353.42 Aligned_cols=262 Identities=26% Similarity=0.320 Sum_probs=207.6
Q ss_pred hcCCcccCeecccCcEEEEEEE----EcCCCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeC--Ce
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLD----LKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKG--GS 745 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~----~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~~ 745 (973)
..+|++.+.||+|+||+||+|+ ...+++.||||++... ...+.+.+|++++++++||||+++++++..+ ..
T Consensus 20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 99 (302)
T 4e5w_A 20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 99 (302)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CC
T ss_pred hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCce
Confidence 3468899999999999999999 4567899999998753 3457789999999999999999999999876 66
Q ss_pred eEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccC
Q 002063 746 SFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGV 825 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl 825 (973)
.++||||+++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+
T Consensus 100 ~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~ 172 (302)
T 4e5w_A 100 IKLIMEFLPSGSLKEYLPKN----KNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGL 172 (302)
T ss_dssp EEEEEECCTTCBHHHHHHHH----TTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTT
T ss_pred EEEEEEeCCCCcHHHHHHhc----cccCCHHHHHHHHHHHHHHHHHhh---cCCcccCCCchheEEEcCCCCEEECcccc
Confidence 89999999999999999754 245889999999999999999999 78999999999999999999999999999
Q ss_pred CccccCCCCc-ccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccC---------CCccHHHHH
Q 002063 826 AKIAENSPKV-SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYG---------DGKDIVYWV 895 (973)
Q Consensus 826 ~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~---------~~~~~~~~~ 895 (973)
+......... .......||..|+|||++.+..++.++||||+|+++|||++|..|+..... .........
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 252 (302)
T 4e5w_A 173 TKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRL 252 (302)
T ss_dssp CEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHH
T ss_pred cccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHH
Confidence 9877544322 222345688899999999999999999999999999999999998754310 000000011
Q ss_pred HHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcC
Q 002063 896 STHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADA 953 (973)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 953 (973)
..... .......+......+.+++.+||+.||.+|||+.++++.|+.+
T Consensus 253 ~~~~~----------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 300 (302)
T 4e5w_A 253 VNTLK----------EGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 300 (302)
T ss_dssp HHHHH----------TTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHh----------ccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHH
Confidence 11100 1111111223345688999999999999999999999999864
No 142
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=3.8e-38 Score=340.67 Aligned_cols=249 Identities=30% Similarity=0.398 Sum_probs=204.5
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEE
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
.+++|++.+.||+|+||+||+|++..+++.||||++... .....+.+|++++++++||||+++++++.+++..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 356889999999999999999999999999999998652 235668899999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcc
Q 002063 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||+++|+|.+++... ..+++..+..++.|++.|++||| +.+|+||||||+||+++.++.++|+|||++..
T Consensus 87 v~e~~~~~~l~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~ 158 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVH 158 (279)
T ss_dssp EECCCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---TTTCEECCCCGGGEEECTTSCEEECSCCEESC
T ss_pred EEecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHhEEEcCCCCEEEEecccccc
Confidence 99999999999999764 34789999999999999999999 88999999999999999999999999998865
Q ss_pred ccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhh
Q 002063 829 AENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKV 908 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (973)
.... ......|++.|+|||++.+..++.++||||+|+++|+|++|+.||.... .............
T Consensus 159 ~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~----- 224 (279)
T 3fdn_A 159 APSS----RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT-----YQETYKRISRVEF----- 224 (279)
T ss_dssp C------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHHHHTCC-----
T ss_pred CCcc----cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCc-----HHHHHHHHHhCCC-----
Confidence 4332 1233568999999999999999999999999999999999999997531 1111111111110
Q ss_pred ccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 909 LDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
.. +......+.+++.+||+.||.+||++.|+++|-.
T Consensus 225 ---~~----~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~ 260 (279)
T 3fdn_A 225 ---TF----PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 260 (279)
T ss_dssp ---CC----CTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCHH
T ss_pred ---CC----CCcCCHHHHHHHHHHhccChhhCCCHHHHhhCcc
Confidence 00 1112345788999999999999999999998755
No 143
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=2.5e-38 Score=359.19 Aligned_cols=254 Identities=22% Similarity=0.288 Sum_probs=196.3
Q ss_pred hcCCccc-CeecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHh-cCCCceeeEeEEEEe----CCeeEE
Q 002063 675 ICNLEED-NLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGK-IRHRNILKLYACLLK----GGSSFL 748 (973)
Q Consensus 675 ~~~~~~~-~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~-l~hpniv~l~~~~~~----~~~~~l 748 (973)
.++|.+. +.||+|+||+||+|++..+++.||||++... ..+.+|++++.+ .+||||+++++++.. +...|+
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~l 136 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC---PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI 136 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS---HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc---hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEE
Confidence 4567776 6899999999999999999999999998643 456788988754 589999999999875 567899
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecC---CCceEEecccC
Q 002063 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE---DYEPKIADFGV 825 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~---~~~~kl~Dfgl 825 (973)
||||+++|+|.+++... ....+++..+..++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||+
T Consensus 137 v~E~~~gg~L~~~l~~~---~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~ 210 (400)
T 1nxk_A 137 VMECLDGGELFSRIQDR---GDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGF 210 (400)
T ss_dssp EEECCCSEEHHHHHHCC------CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSTTCCEEECCCTT
T ss_pred EEEeCCCCcHHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCcceEEEecCCCCccEEEEeccc
Confidence 99999999999999753 2345899999999999999999999 789999999999999997 78999999999
Q ss_pred CccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCc--cHHHHHHHhhcccc
Q 002063 826 AKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGK--DIVYWVSTHLNNHE 903 (973)
Q Consensus 826 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~--~~~~~~~~~~~~~~ 903 (973)
++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ .....+......
T Consensus 211 a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~-- 285 (400)
T 1nxk_A 211 AKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE-- 285 (400)
T ss_dssp CEECC--------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCC--
T ss_pred ccccCCCC---ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCccc--
Confidence 98654322 22345789999999999999999999999999999999999999976532211 111111111000
Q ss_pred cchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 904 NVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
............+.+++.+||+.||++|||+.|+++|-.
T Consensus 286 ---------~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~ 324 (400)
T 1nxk_A 286 ---------FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW 324 (400)
T ss_dssp ---------CCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHH
T ss_pred ---------CCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcc
Confidence 000111223456889999999999999999999998754
No 144
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=3.6e-39 Score=350.67 Aligned_cols=256 Identities=20% Similarity=0.282 Sum_probs=202.2
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCC-------ceEEEEEeec--cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCe
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNA-------GTVAVKQLWK--GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGS 745 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~-------~~vavK~~~~--~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~ 745 (973)
.++|++.+.||+|+||+||+|++..++ ..||+|++.. ....+.+.+|++++++++||||+++++++..++.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence 457899999999999999999998766 4699998865 3456778999999999999999999999999999
Q ss_pred eEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCc--------
Q 002063 746 SFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYE-------- 817 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~-------- 817 (973)
.++||||+++|+|.+++... ...+++..+..++.|++.||+||| +++|+||||||+||+++.++.
T Consensus 87 ~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~ 159 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLKKN----KNCINILWKLEVAKQLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPF 159 (289)
T ss_dssp CEEEEECCTTCBHHHHHHHT----GGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEEECCBGGGTBCCE
T ss_pred CEEEEECCCCCCHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHh---hCCeECCCcCcceEEEecCCcccccccce
Confidence 99999999999999999864 234889999999999999999999 789999999999999998887
Q ss_pred eEEecccCCccccCCCCcccccccCccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHH
Q 002063 818 PKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVS 896 (973)
Q Consensus 818 ~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~ 896 (973)
+||+|||.+...... ....||+.|+|||++.+ ..++.++||||+||++|||++|..|+.... +......
T Consensus 160 ~kl~Dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~----~~~~~~~ 229 (289)
T 4fvq_A 160 IKLSDPGISITVLPK------DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSAL----DSQRKLQ 229 (289)
T ss_dssp EEECCCCSCTTTSCH------HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTS----CHHHHHH
T ss_pred eeeccCcccccccCc------cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCcccc----chHHHHH
Confidence 999999998654321 22457889999999987 678999999999999999999655443221 1111111
Q ss_pred HhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCCCCCC
Q 002063 897 THLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPCTDKS 960 (973)
Q Consensus 897 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~~ 960 (973)
.. ....... . .....+.+++.+||+.||++|||+.|++++|+++.......
T Consensus 230 ~~-~~~~~~~----~--------~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~~~ 280 (289)
T 4fvq_A 230 FY-EDRHQLP----A--------PKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLVP 280 (289)
T ss_dssp HH-HTTCCCC----C--------CSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC------
T ss_pred Hh-hccCCCC----C--------CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCCC
Confidence 11 1111000 0 11234778999999999999999999999999998755433
No 145
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.1e-38 Score=368.06 Aligned_cols=347 Identities=18% Similarity=0.167 Sum_probs=233.5
Q ss_pred CCEEEcccccCCCCCChhhhccCCCCeeeccccccccccchhhhccccccEEEeecccCCCCCCccccccccccEEEeec
Q 002063 195 LTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISS 274 (973)
Q Consensus 195 L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~ 274 (973)
-+.++.++++++ .+|..+. +++++|+|++|+|++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++
T Consensus 13 ~~~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 89 (477)
T 2id5_A 13 DRAVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRS 89 (477)
T ss_dssp TTEEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCC
Confidence 357788888887 5665443 5778888888888766677777777777777777777766677777777777777777
Q ss_pred cccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCccccceeeccccccCCCCCccccccccccccccccccccccCC
Q 002063 275 NQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFP 354 (973)
Q Consensus 275 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p 354 (973)
|++++..+..|.++++|++|++++|++.+..+..|..+++|+.|++++|.+++..+..|..+++|+.|+|++|+++
T Consensus 90 n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~---- 165 (477)
T 2id5_A 90 NRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLT---- 165 (477)
T ss_dssp SCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCS----
T ss_pred CcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCc----
Confidence 7777544455667777777777777776666666666666666666666665555555555555555555555554
Q ss_pred hhhhhhhhHHHHHhhhccCCCCCCCcccCccccceEecccccccccCCccccCCCCcceEeccCCcCCCCCCCccCCCCC
Q 002063 355 KYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTS 434 (973)
Q Consensus 355 ~~~~~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~ 434 (973)
+..+..|..+++|+.|++++|++.+..+..|..+++
T Consensus 166 --------------------------------------------~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~ 201 (477)
T 2id5_A 166 --------------------------------------------SIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYR 201 (477)
T ss_dssp --------------------------------------------SCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTT
T ss_pred --------------------------------------------ccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcc
Confidence 333334444444444444444444444444555566
Q ss_pred CCEEEcccCCCCCCCChhhhcCCCCCEEecCCCcCCCCccccccccccCCEEEccCcccccCCCccccCccccchhhccc
Q 002063 435 LSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLAR 514 (973)
Q Consensus 435 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 514 (973)
|+.|++++|.+.+.+|.......+|+.|+|++|++++..+..+..+++|+.|+|++|++++..+..|.++++|+.|+|++
T Consensus 202 L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 281 (477)
T 2id5_A 202 LKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVG 281 (477)
T ss_dssp CCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCS
T ss_pred cceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCC
Confidence 66666666665555565555556777777777777755556677777777777777777777777777777788888888
Q ss_pred cccccCCCccccccCCCCeeecCCCccCCCCCchhhccc-CceEEccCCccccccCcccccC-CCCccccCCCCCccCcc
Q 002063 515 NSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLK-LSSIDLSENQLSGSVPLDFLRM-GGDGAFAGNEGLCLDQS 592 (973)
Q Consensus 515 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-L~~l~ls~N~l~~~~p~~~~~~-~~~~~~~~n~~lc~~~~ 592 (973)
|++++..|..|..+++|+.|+|++|+|++..+..+..++ |+.|+|++|+|.|.|+..|..- .....+.++...|+.|.
T Consensus 282 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p~ 361 (477)
T 2id5_A 282 GQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPE 361 (477)
T ss_dssp SCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGGHHHHTTTTSSCCTTCCCBEEESG
T ss_pred CccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccchHhHHhhhhccccCccCceeCCch
Confidence 888777777788888888888888888866666666664 8888888888888887654321 12235667777887665
No 146
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=5.8e-39 Score=354.95 Aligned_cols=264 Identities=21% Similarity=0.291 Sum_probs=212.3
Q ss_pred HHhcCCcccCeecccCcEEEEEEEEc-----CCCceEEEEEeeccc---cHHHHHHHHHHHHhcCCCceeeEeEEEEeCC
Q 002063 673 EQICNLEEDNLIGSGGTGKVYRLDLK-----KNAGTVAVKQLWKGD---GVKVFAAEMEILGKIRHRNILKLYACLLKGG 744 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~Vy~a~~~-----~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~ 744 (973)
...++|++.+.||+|+||+||+|++. .+++.||||++.... ....+.+|++++++++||||+++++++..++
T Consensus 22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 101 (322)
T 1p4o_A 22 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ 101 (322)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSS
T ss_pred chhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCC
Confidence 34568999999999999999999886 357789999987632 3456889999999999999999999999999
Q ss_pred eeEEEEEccCCCchHHHHHhhhc-----CCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceE
Q 002063 745 SSFLVLEYMPNGNLFQALHKRVK-----EGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPK 819 (973)
Q Consensus 745 ~~~lv~e~~~~gsL~~~l~~~~~-----~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~k 819 (973)
..++||||+++|+|.+++..... .....+++..+..++.|++.||+||| +++|+||||||+||+++.++.+|
T Consensus 102 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~NIli~~~~~~k 178 (322)
T 1p4o_A 102 PTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVK 178 (322)
T ss_dssp SCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSGGGEEECTTCCEE
T ss_pred ccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCCccCCCccceEEEcCCCeEE
Confidence 99999999999999999976421 11245688999999999999999999 78999999999999999999999
Q ss_pred EecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHh
Q 002063 820 IADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTH 898 (973)
Q Consensus 820 l~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~ 898 (973)
|+|||+++...............+|+.|+|||++.+..++.++||||+|+++|||++ |+.||.... ........
T Consensus 179 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~-----~~~~~~~~ 253 (322)
T 1p4o_A 179 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS-----NEQVLRFV 253 (322)
T ss_dssp ECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC-----HHHHHHHH
T ss_pred ECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCC-----HHHHHHHH
Confidence 999999986644333223334457889999999999999999999999999999999 899996531 11111111
Q ss_pred hcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002063 899 LNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
..... ..........+.+++.+||+.||++||++.|++++|++...
T Consensus 254 ~~~~~-----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 254 MEGGL-----------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp HTTCC-----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred HcCCc-----------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 11100 00112234568899999999999999999999999998754
No 147
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1.4e-38 Score=354.31 Aligned_cols=248 Identities=29% Similarity=0.402 Sum_probs=201.9
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 750 (973)
..|+..+.||+|+||+||+|++..+++.||||++... ...+.+.+|++++++++||||+++++++..++..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 4588889999999999999999988999999998642 23456889999999999999999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcccc
Q 002063 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~ 830 (973)
||++ |++.+++... ...+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++....
T Consensus 134 e~~~-g~l~~~l~~~----~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 205 (348)
T 1u5q_A 134 EYCL-GSASDLLEVH----KKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA 205 (348)
T ss_dssp ECCS-EEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSS
T ss_pred ecCC-CCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEeeccCceecC
Confidence 9996 6888888653 346899999999999999999999 7799999999999999999999999999997654
Q ss_pred CCCCcccccccCcccccccccccc---cCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchh
Q 002063 831 NSPKVSDYSCFAGTHGYIAPELAY---TCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLK 907 (973)
Q Consensus 831 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
.. ....||+.|+|||++. +..++.++|||||||++|||++|+.||.... .............
T Consensus 206 ~~------~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~-----~~~~~~~~~~~~~---- 270 (348)
T 1u5q_A 206 PA------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN-----AMSALYHIAQNES---- 270 (348)
T ss_dssp SB------CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC-----HHHHHHHHHHSCC----
T ss_pred CC------CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHhcCC----
Confidence 32 2356899999999984 5678999999999999999999999996531 1111111111111
Q ss_pred hccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhc
Q 002063 908 VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLAD 952 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 952 (973)
+.. ........+.+++.+||+.||++|||+.+++++..-
T Consensus 271 ---~~~---~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~ 309 (348)
T 1u5q_A 271 ---PAL---QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV 309 (348)
T ss_dssp ---CCC---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHH
T ss_pred ---CCC---CCCCCCHHHHHHHHHHcccChhhCcCHHHHhhChhh
Confidence 000 011223457889999999999999999999987553
No 148
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=3.8e-38 Score=347.97 Aligned_cols=253 Identities=22% Similarity=0.268 Sum_probs=208.4
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc--------cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCe
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD--------GVKVFAAEMEILGKIRHRNILKLYACLLKGGS 745 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~--------~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~ 745 (973)
..++|++.+.||+|+||+||+|++..+++.||||++.... ..+.+.+|++++++++||||+++++++..++.
T Consensus 10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 89 (321)
T 2a2a_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTD 89 (321)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred hhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCE
Confidence 3457899999999999999999999999999999987532 35778999999999999999999999999999
Q ss_pred eEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCC----ceEEe
Q 002063 746 SFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDY----EPKIA 821 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~----~~kl~ 821 (973)
.++||||+++++|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++ .+||+
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~lH---~~~ivH~dikp~NIl~~~~~~~~~~~kl~ 161 (321)
T 2a2a_A 90 VVLILELVSGGELFDFLAQK-----ESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLI 161 (321)
T ss_dssp EEEEECCCCSCBHHHHHHTC-----SCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEEC
T ss_pred EEEEEEcCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChHHEEEecCCCCcCCEEEc
Confidence 99999999999999999742 45889999999999999999999 78999999999999999887 79999
Q ss_pred cccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcc
Q 002063 822 DFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNN 901 (973)
Q Consensus 822 Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~ 901 (973)
|||++........ .....||+.|+|||++.+..++.++||||+|+++|+|++|+.||.... ...........
T Consensus 162 Dfg~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~~~~~~i~~~ 233 (321)
T 2a2a_A 162 DFGLAHEIEDGVE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT-----KQETLANITSV 233 (321)
T ss_dssp CCTTCEECCTTCC---CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS-----HHHHHHHHHTT
T ss_pred cCccceecCcccc---ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHhc
Confidence 9999987654322 233568999999999999999999999999999999999999996531 11111111111
Q ss_pred cccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 902 HENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
.. .............+.+++.+|++.||++|||+.|++++-
T Consensus 234 ~~--------~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp 274 (321)
T 2a2a_A 234 SY--------DFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHP 274 (321)
T ss_dssp CC--------CCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHST
T ss_pred cc--------ccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcCc
Confidence 10 001111122345688999999999999999999999864
No 149
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-37 Score=347.04 Aligned_cols=267 Identities=27% Similarity=0.352 Sum_probs=206.0
Q ss_pred HHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHhc--CCCceeeEeEEEEeC----Cee
Q 002063 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKI--RHRNILKLYACLLKG----GSS 746 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l--~hpniv~l~~~~~~~----~~~ 746 (973)
...++|++.+.||+|+||+||+|++. ++.||||++.... ...+.+|.+++... +||||+++++++... ...
T Consensus 34 ~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~-~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 110 (337)
T 3mdy_A 34 TIAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTTE-EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQL 110 (337)
T ss_dssp THHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEE
T ss_pred ccccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEeccc-cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCce
Confidence 44568999999999999999999986 8899999986543 34455666666554 899999999999887 789
Q ss_pred EEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCC--------CeEecCCCCCCeeecCCCce
Q 002063 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSP--------PIIHRDIKSSNILLDEDYEP 818 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~--------~ivH~Dlkp~Nill~~~~~~ 818 (973)
|+||||+++|+|.++++.. .+++..+..++.|++.||+||| +. +|+||||||+||+++.++.+
T Consensus 111 ~lv~e~~~~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~~~~ivH~Dikp~Nill~~~~~~ 181 (337)
T 3mdy_A 111 YLITDYHENGSLYDYLKST------TLDAKSMLKLAYSSVSGLCHLH---TEIFSTQGKPAIAHRDLKSKNILVKKNGTC 181 (337)
T ss_dssp EEEECCCTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHH---SCBCSTTCBCCEECSCCCGGGEEECTTSCE
T ss_pred EEEEeccCCCcHHHHhhcc------CCCHHHHHHHHHHHHHHHHHHH---HhhhhhccCCCEEecccchHHEEECCCCCE
Confidence 9999999999999999753 4889999999999999999999 66 99999999999999999999
Q ss_pred EEecccCCccccCCCCccc--ccccCcccccccccccccCCCCcc------chHHHHHHHHHHHHhC----------CCC
Q 002063 819 KIADFGVAKIAENSPKVSD--YSCFAGTHGYIAPELAYTCKVSEK------SDVFSFGVVLLELVTG----------RKP 880 (973)
Q Consensus 819 kl~Dfgl~~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~------~DvwslG~~l~ell~g----------~~p 880 (973)
||+|||+++.......... .....||+.|+|||++.+..+..+ +|||||||++|||++| +.|
T Consensus 182 kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p 261 (337)
T 3mdy_A 182 CIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLP 261 (337)
T ss_dssp EECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred EEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccccccccccc
Confidence 9999999976644322211 224579999999999987766655 9999999999999999 666
Q ss_pred CCcccCCCccHHHHHHHhhcccccchhhccccccC-hhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCCC
Q 002063 881 VEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVAS-ESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPCT 957 (973)
Q Consensus 881 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~ 957 (973)
|..................... ..+.... ....+....+.+++.+||+.||++||++.+++++|+.+....
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 262 YHDLVPSDPSYEDMREIVCIKK------LRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ 333 (337)
T ss_dssp TTTTSCSSCCHHHHHHHHTTSC------CCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred HhhhcCCCCchhhhHHHHhhhc------cCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence 6554333333322222211111 0111111 112356778999999999999999999999999999876543
No 150
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=1.1e-38 Score=343.44 Aligned_cols=252 Identities=21% Similarity=0.277 Sum_probs=203.0
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeC--CeeE
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKG--GSSF 747 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~~~~ 747 (973)
..++|++.+.||+|+||+||+|++. ++.||||++... ...+.+.+|++++++++||||+++++++..+ ...+
T Consensus 8 ~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 85 (271)
T 3kmu_A 8 DFKQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPT 85 (271)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCE
T ss_pred CHHHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeE
Confidence 3467899999999999999999986 789999998753 3345788999999999999999999999876 7889
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCC--eEecCCCCCCeeecCCCceEEecccC
Q 002063 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPP--IIHRDIKSSNILLDEDYEPKIADFGV 825 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~--ivH~Dlkp~Nill~~~~~~kl~Dfgl 825 (973)
+||||+++|+|.+++... ....+++..+..++.|++.||+||| +.+ ++||||||+||+++.++.++++|||+
T Consensus 86 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~ 159 (271)
T 3kmu_A 86 LITHWMPYGSLYNVLHEG---TNFVVDQSQAVKFALDMARGMAFLH---TLEPLIPRHALNSRSVMIDEDMTARISMADV 159 (271)
T ss_dssp EEEECCTTCBHHHHHHSC---SSCCCCHHHHHHHHHHHHHHHHHHT---TSSSCCTTCCCSGGGEEECTTSCEEEEGGGS
T ss_pred eeecccCCCcHHHHHhhc---ccCCCCHHHHHHHHHHHHHHHHHHh---cCCCceecCCCccceEEEcCCcceeEEeccc
Confidence 999999999999999853 2335899999999999999999999 677 99999999999999999999999988
Q ss_pred CccccCCCCcccccccCcccccccccccccCCCCc---cchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccc
Q 002063 826 AKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSE---KSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNH 902 (973)
Q Consensus 826 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~ 902 (973)
+..... ....||+.|+|||++.+..++. ++||||+||++|||++|+.||.... ............
T Consensus 160 ~~~~~~-------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-----~~~~~~~~~~~~ 227 (271)
T 3kmu_A 160 KFSFQS-------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLS-----NMEIGMKVALEG 227 (271)
T ss_dssp CCTTSC-------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSC-----HHHHHHHHHHSC
T ss_pred eeeecc-------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccC-----hHHHHHHHHhcC
Confidence 754322 2246799999999998765544 7999999999999999999997531 111111111111
Q ss_pred ccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002063 903 ENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
. ....+......+.+++.+||+.||++|||+.++++.|+++..
T Consensus 228 ~----------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 228 L----------RPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp C----------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred C----------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 0 011112234568899999999999999999999999988653
No 151
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=4.3e-38 Score=354.09 Aligned_cols=255 Identities=17% Similarity=0.154 Sum_probs=207.0
Q ss_pred hcCCcccCeecccCcEEEEEEE-----EcCCCceEEEEEeeccccHHHHHHHHHHHHhcC---CCceeeEeEEEEeCCee
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLD-----LKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIR---HRNILKLYACLLKGGSS 746 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~-----~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~---hpniv~l~~~~~~~~~~ 746 (973)
..+|++.+.||+|+||+||+|. ...+++.||||++... ...++.+|++++++++ |+||+++++++..++..
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~ 142 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA-NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGS 142 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC-CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCE
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC-ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCc
Confidence 4578999999999999999994 5667899999988654 4557788999988887 99999999999999999
Q ss_pred EEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecC-----------C
Q 002063 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE-----------D 815 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~-----------~ 815 (973)
|+||||+++|+|.+++..........+++..+..++.|+++||+||| +.+|+||||||+|||++. +
T Consensus 143 ~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~ivHrDiKp~NIll~~~~~~~~~~~~~~ 219 (365)
T 3e7e_A 143 VLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQDDEDDLS 219 (365)
T ss_dssp EEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECGGGTCC------C
T ss_pred EEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEecccccCcccccccc
Confidence 99999999999999998764445567999999999999999999999 789999999999999998 8
Q ss_pred CceEEecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHH
Q 002063 816 YEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWV 895 (973)
Q Consensus 816 ~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~ 895 (973)
+.+||+|||+++...............||+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 220 ~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~------ 293 (365)
T 3e7e_A 220 AGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC------ 293 (365)
T ss_dssp TTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE------
T ss_pred CCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce------
Confidence 99999999999866533333444556799999999999999999999999999999999999999965422100
Q ss_pred HHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCC-CCHHHHHHHhhcCC
Q 002063 896 STHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLR-PPMREVVKMLADAD 954 (973)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R-pt~~evl~~L~~~~ 954 (973)
.....+.. .. ..+.+.+++..|++.+|.+| |+++++.+.|++..
T Consensus 294 --------~~~~~~~~----~~---~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l 338 (365)
T 3e7e_A 294 --------KPEGLFRR----LP---HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVF 338 (365)
T ss_dssp --------EECSCCTT----CS---SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHH
T ss_pred --------eechhccc----cC---cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHH
Confidence 00011111 01 13346678889999999998 67788877777653
No 152
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1.9e-38 Score=348.74 Aligned_cols=254 Identities=24% Similarity=0.327 Sum_probs=195.4
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCC----e
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGG----S 745 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~----~ 745 (973)
.++|++.+.||+|+||+||+|++..+++.||||++... .....+.+|++++++++||||+++++++.... .
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 46899999999999999999999999999999998653 23456889999999999999999999987654 3
Q ss_pred eEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccC
Q 002063 746 SFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGV 825 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl 825 (973)
.|+||||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 162 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTE-----GPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGI 162 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEETTSCEEECCCSC
T ss_pred cEEEEecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEcCCCCEEEeeccC
Confidence 49999999999999999764 25889999999999999999999 78999999999999999999999999999
Q ss_pred CccccCCCCc-ccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccccc
Q 002063 826 AKIAENSPKV-SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHEN 904 (973)
Q Consensus 826 ~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 904 (973)
++........ .......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..............
T Consensus 163 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~-----~~~~~~~~~~~~~~ 237 (311)
T 3ork_A 163 ARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS-----PVSVAYQHVREDPI 237 (311)
T ss_dssp C------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHCCCC
T ss_pred cccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHhcCCCC
Confidence 9866543221 22233568999999999999999999999999999999999999996531 11111111111110
Q ss_pred chhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 905 VLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
.. ..........+.+++.+||+.||++||++.+++++
T Consensus 238 ~~--------~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~ 274 (311)
T 3ork_A 238 PP--------SARHEGLSADLDAVVLKALAKNPENRYQTAAEMRA 274 (311)
T ss_dssp CH--------HHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred Cc--------ccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHH
Confidence 00 00111234568899999999999999977766543
No 153
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=4e-38 Score=341.46 Aligned_cols=253 Identities=24% Similarity=0.311 Sum_probs=200.5
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 751 (973)
.++|++.+.||+|+||+||+|++..++..||+|++... ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 100 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME 100 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence 46789999999999999999999999999999998763 345788999999999999999999999999999999999
Q ss_pred ccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeee---cCCCceEEecccCCcc
Q 002063 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILL---DEDYEPKIADFGVAKI 828 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill---~~~~~~kl~Dfgl~~~ 828 (973)
|+++|+|.+++..... ....+++..+..++.|+++||+||| +.+|+||||||+||++ +.++.+||+|||++..
T Consensus 101 ~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~ 176 (285)
T 3is5_A 101 TCEGGELLERIVSAQA-RGKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAEL 176 (285)
T ss_dssp CCSCCBHHHHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC
T ss_pred eCCCCcHHHHHHhhhh-cccCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCCCHHHEEEecCCCCCCEEEEeeeccee
Confidence 9999999999975422 2346899999999999999999999 7899999999999999 4567899999999976
Q ss_pred ccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhh
Q 002063 829 AENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKV 908 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (973)
...... .....||+.|+|||++. ..++.++||||+|+++|||++|+.||.... ................
T Consensus 177 ~~~~~~---~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~-----~~~~~~~~~~~~~~~~-- 245 (285)
T 3is5_A 177 FKSDEH---STNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTS-----LEEVQQKATYKEPNYA-- 245 (285)
T ss_dssp -------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHCCCCCC--
T ss_pred cCCccc---CcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCC-----HHHHHhhhccCCcccc--
Confidence 544322 23356899999999875 568999999999999999999999997531 1111111111111000
Q ss_pred ccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 909 LDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
. ........+.+++.+||+.||++||++.|++++
T Consensus 246 --~-----~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 246 --V-----ECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp --C-------CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred --c-----ccCcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 001123467789999999999999999999875
No 154
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=2.6e-38 Score=364.56 Aligned_cols=248 Identities=25% Similarity=0.363 Sum_probs=206.5
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEE
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
..++|.+.+.||+|+||+||+|++..+|+.||||++... .....+.+|+++++.++||||+++++++..++..|+
T Consensus 14 ~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~l 93 (476)
T 2y94_A 14 KIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFM 93 (476)
T ss_dssp EETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred eecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 456899999999999999999999999999999998753 235678999999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcc
Q 002063 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||+++|+|.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++..
T Consensus 94 v~E~~~gg~L~~~l~~-----~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDLkp~NIll~~~~~vkL~DFG~a~~ 165 (476)
T 2y94_A 94 VMEYVSGGELFDYICK-----NGRLDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNM 165 (476)
T ss_dssp EEECCSSEEHHHHTTS-----SSSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEECTTCCEEECCCSSCEE
T ss_pred EEeCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcccccHHHEEEecCCCeEEEeccchhh
Confidence 9999999999999864 345899999999999999999999 88999999999999999999999999999987
Q ss_pred ccCCCCcccccccCcccccccccccccCCC-CccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchh
Q 002063 829 AENSPKVSDYSCFAGTHGYIAPELAYTCKV-SEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLK 907 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
...... .....||+.|+|||++.+..+ +.++||||+||++|||++|+.||.... . .............
T Consensus 166 ~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~--~---~~~~~~i~~~~~~--- 234 (476)
T 2y94_A 166 MSDGEF---LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDH--V---PTLFKKICDGIFY--- 234 (476)
T ss_dssp CCTTCC---BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSS--S---HHHHHHHHTTCCC---
T ss_pred cccccc---ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCC--H---HHHHHHHhcCCcC---
Confidence 654322 233579999999999988766 689999999999999999999997542 1 1111111111100
Q ss_pred hccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 908 VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
.+......+.+++.+||+.||.+|||+.|+++|
T Consensus 235 ---------~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 235 ---------TPQYLNPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp ---------CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred ---------CCccCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 011123457889999999999999999999985
No 155
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=4.4e-38 Score=343.42 Aligned_cols=263 Identities=18% Similarity=0.174 Sum_probs=210.5
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHhcCCCceeeEeEEE-EeCCeeEEEEEcc
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYACL-LKGGSSFLVLEYM 753 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~-~~~~~~~lv~e~~ 753 (973)
.++|++.+.||+|+||+||+|++..+++.||||++......+.+.+|+++++.++|++++..+.++ ..++..++||||+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 87 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL 87 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcchhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec
Confidence 468999999999999999999999889999999988766667789999999999988866666554 6677889999999
Q ss_pred CCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeee---cCCCceEEecccCCcccc
Q 002063 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILL---DEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill---~~~~~~kl~Dfgl~~~~~ 830 (973)
+++|.+++... ...+++..+..++.|++.||+||| +++|+||||||+||++ +.++.+||+|||++....
T Consensus 88 -~~~L~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~ 159 (296)
T 3uzp_A 88 -GPSLEDLFNFC----SRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp -CCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred -CCCHHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccc
Confidence 99999999753 335899999999999999999999 7899999999999999 478899999999998765
Q ss_pred CCCCc-----ccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCC-CccHHHHH-HHhhcccc
Q 002063 831 NSPKV-----SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGD-GKDIVYWV-STHLNNHE 903 (973)
Q Consensus 831 ~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~-~~~~~~~~-~~~~~~~~ 903 (973)
..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .......+ ........
T Consensus 160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 239 (296)
T 3uzp_A 160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI 239 (296)
T ss_dssp CTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH
T ss_pred ccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCch
Confidence 44321 1123457899999999999999999999999999999999999999864321 11111111 11111100
Q ss_pred cchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCC
Q 002063 904 NVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPC 956 (973)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~ 956 (973)
. .........+.+++.+||+.||++||++.++++.|+++...
T Consensus 240 ---~--------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 281 (296)
T 3uzp_A 240 ---E--------VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 281 (296)
T ss_dssp ---H--------HHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHH
T ss_pred ---H--------HHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHh
Confidence 0 00112245688999999999999999999999999987543
No 156
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=9.8e-39 Score=347.10 Aligned_cols=260 Identities=28% Similarity=0.431 Sum_probs=194.6
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEE
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 749 (973)
..++|++.+.||+|+||+||+|++.. .||||++... ...+.+.+|++++++++||||++++++. .....++|
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~~~~~~---~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv 97 (289)
T 3og7_A 22 PDGQITVGQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIV 97 (289)
T ss_dssp CTTSCEEEEEEEECSSEEEEEEESSS---EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEE
T ss_pred CccceeeeeEecCCCCeEEEEEEEcC---ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEE
Confidence 35689999999999999999998754 5999988642 3446789999999999999999999964 55678999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccc
Q 002063 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
|||+++++|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++...
T Consensus 98 ~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 170 (289)
T 3og7_A 98 TQWCEGSSLYHHLHAS----ETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEK 170 (289)
T ss_dssp EECCCEEEHHHHHTTC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEEEECCCC-----
T ss_pred EEecCCCcHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEECCCCCEEEccceecccc
Confidence 9999999999998642 346899999999999999999999 789999999999999999999999999999866
Q ss_pred cCCCCcccccccCcccccccccccc---cCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccch
Q 002063 830 ENSPKVSDYSCFAGTHGYIAPELAY---TCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVL 906 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (973)
.............||+.|+|||++. +..++.++||||+|+++|||++|+.||..... .......+...... .
T Consensus 171 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-~~~~~~~~~~~~~~-~--- 245 (289)
T 3og7_A 171 SRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINN-RDQIIEMVGRGSLS-P--- 245 (289)
T ss_dssp -------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCC-HHHHHHHHHHTSCC-C---
T ss_pred ccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccch-HHHHHHHhcccccC-c---
Confidence 5433333334457899999999986 66788899999999999999999999975421 11111111111100 0
Q ss_pred hhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002063 907 KVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
. ........+..+.+++.+||+.||.+||++.++++.|+++..
T Consensus 246 -----~-~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 246 -----D-LSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp -----C-TTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred -----c-hhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 0 001112334568899999999999999999999999998753
No 157
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=6.7e-38 Score=352.12 Aligned_cols=263 Identities=22% Similarity=0.236 Sum_probs=205.5
Q ss_pred HHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeec-cccHHHHHHHHHHHHhcC-----CCceeeEeEEEEeCCee
Q 002063 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK-GDGVKVFAAEMEILGKIR-----HRNILKLYACLLKGGSS 746 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~-~~~~~~~~~E~~~l~~l~-----hpniv~l~~~~~~~~~~ 746 (973)
...++|++.+.||+|+||+||+|++..+++.||||++.. ......+.+|+++++.+. ||||+++++++...+..
T Consensus 32 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~ 111 (360)
T 3llt_A 32 LLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHM 111 (360)
T ss_dssp EETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEE
T ss_pred EecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCee
Confidence 345789999999999999999999998899999999875 334556788999999986 99999999999999999
Q ss_pred EEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecC------------
Q 002063 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE------------ 814 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~------------ 814 (973)
++||||+ +++|.+++... ....+++..+..++.|++.||+||| +.+|+||||||+||+++.
T Consensus 112 ~lv~e~~-~~~L~~~~~~~---~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~~~~~~ 184 (360)
T 3llt_A 112 CLIFEPL-GPSLYEIITRN---NYNGFHIEDIKLYCIEILKALNYLR---KMSLTHTDLKPENILLDDPYFEKSLITVRR 184 (360)
T ss_dssp EEEECCC-CCBHHHHHHHT---TTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCTTCCEEEEEEEC
T ss_pred EEEEcCC-CCCHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCcccEEEccccccccccchhc
Confidence 9999999 99999999864 2335889999999999999999999 789999999999999975
Q ss_pred -------------CCceEEecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCC
Q 002063 815 -------------DYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPV 881 (973)
Q Consensus 815 -------------~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf 881 (973)
++.+||+|||+++...... ....||+.|+|||++.+..++.++||||+||++|||++|+.||
T Consensus 185 ~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf 259 (360)
T 3llt_A 185 VTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH-----GSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLF 259 (360)
T ss_dssp TTTCCEEEEEEESCCCEEECCCTTCEETTSCC-----CSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSC
T ss_pred ccccccccccccCCCCEEEEeccCceecCCCC-----cCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCC
Confidence 7899999999998654321 2356899999999999999999999999999999999999999
Q ss_pred CcccCCCccHHHHHHHhhccccc----------chhhcccc--------c-------------cChhhHHHHHHHHHHHH
Q 002063 882 EEEYGDGKDIVYWVSTHLNNHEN----------VLKVLDCE--------V-------------ASESIKEDMIKLLKIAV 930 (973)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~--------~-------------~~~~~~~~~~~l~~l~~ 930 (973)
.... ..+....+.......+. .....+.. . ...........+.+++.
T Consensus 260 ~~~~--~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 337 (360)
T 3llt_A 260 RTHE--HMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLY 337 (360)
T ss_dssp CCSS--HHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHH
T ss_pred CCCc--HHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHH
Confidence 7531 11111111111100000 00000000 0 00000111256789999
Q ss_pred HhcCCCCCCCCCHHHHHHH
Q 002063 931 VCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 931 ~cl~~dP~~Rpt~~evl~~ 949 (973)
+||+.||++|||+.|+++|
T Consensus 338 ~~L~~dP~~Rpta~elL~h 356 (360)
T 3llt_A 338 SILQIDPTLRPSPAELLKH 356 (360)
T ss_dssp HHCCSSGGGSCCHHHHTTS
T ss_pred HHhcCChhhCCCHHHHhcC
Confidence 9999999999999999875
No 158
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=4.2e-39 Score=356.67 Aligned_cols=271 Identities=27% Similarity=0.299 Sum_probs=209.7
Q ss_pred hcCCcccCeecccCcEEEEEEE----EcCCCceEEEEEeecc--ccHHHHHHHHHHHHhcCCCceeeEeEEEE--eCCee
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLD----LKKNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRHRNILKLYACLL--KGGSS 746 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~----~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~--~~~~~ 746 (973)
..+|++.+.||+|+||+||+|+ ...+++.||||++... ...+.+.+|++++++++||||+++++++. .....
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 101 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL 101 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence 3578999999999999999999 4567899999998763 34456899999999999999999999886 45678
Q ss_pred EEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCC
Q 002063 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVA 826 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~ 826 (973)
++||||+++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 102 ~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~ 174 (327)
T 3lxl_A 102 RLVMEYLPSGCLRDFLQRH----RARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLA 174 (327)
T ss_dssp EEEEECCTTCBHHHHHHHH----GGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCGGGC
T ss_pred EEEEeecCCCCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChhhEEECCCCCEEEcccccc
Confidence 9999999999999999864 235899999999999999999999 789999999999999999999999999999
Q ss_pred ccccCCCCc-ccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHH--Hhhcccc
Q 002063 827 KIAENSPKV-SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVS--THLNNHE 903 (973)
Q Consensus 827 ~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~--~~~~~~~ 903 (973)
......... .......||..|+|||++.+..++.++||||+|+++|+|++|+.||.....+ ...... .......
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~---~~~~~~~~~~~~~~~ 251 (327)
T 3lxl_A 175 KLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAE---FLRMMGCERDVPALS 251 (327)
T ss_dssp EECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHH---HHHHCC----CCHHH
T ss_pred eecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccch---hhhhcccccccccHH
Confidence 876543322 1223356888999999999988999999999999999999999998653210 000000 0000000
Q ss_pred cchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002063 904 NVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
...+.................+.+++.+||+.||++||++.|++++|+.+..
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 303 (327)
T 3lxl_A 252 RLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWS 303 (327)
T ss_dssp HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC--
T ss_pred HHHHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 0001111111111223345668899999999999999999999999998754
No 159
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.4e-38 Score=346.89 Aligned_cols=264 Identities=22% Similarity=0.311 Sum_probs=200.6
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc----cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD----GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 750 (973)
+++|++.+.||+|+||+||+|++..+++.||||++.... ..+.+.+|++++++++||||+++++++..++..++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF 81 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence 467999999999999999999999999999999886532 2456788999999999999999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcccc
Q 002063 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~ 830 (973)
||+++++|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||.+....
T Consensus 82 e~~~~~~l~~~~~~~-----~~~~~~~~~~i~~~l~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 153 (311)
T 4agu_A 82 EYCDHTVLHELDRYQ-----RGVPEHLVKSITWQTLQAVNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLLT 153 (311)
T ss_dssp ECCSEEHHHHHHHTS-----SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EeCCCchHHHHHhhh-----cCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCChhhEEEcCCCCEEEeeCCCchhcc
Confidence 999999998887642 35889999999999999999999 7899999999999999999999999999998765
Q ss_pred CCCCcccccccCccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcc--------
Q 002063 831 NSPKVSDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNN-------- 901 (973)
Q Consensus 831 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~-------- 901 (973)
.... ......||+.|+|||++.+ ..++.++||||+|+++|+|++|+.||.... ..+....+......
T Consensus 154 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 229 (311)
T 4agu_A 154 GPSD--YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKS--DVDQLYLIRKTLGDLIPRHQQV 229 (311)
T ss_dssp --------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCSCCHHHHHH
T ss_pred Cccc--ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHhcccccccccc
Confidence 3322 1233568999999999876 568999999999999999999999996542 11111111111100
Q ss_pred ---cccch--hhccccccC---hhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 902 ---HENVL--KVLDCEVAS---ESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 902 ---~~~~~--~~~~~~~~~---~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
..... ...++.... .........+.+++.+||+.||++|||+.|+++|-
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 286 (311)
T 4agu_A 230 FSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHP 286 (311)
T ss_dssp HHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSG
T ss_pred cccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcCh
Confidence 00000 000000000 00123345688999999999999999999999873
No 160
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1e-38 Score=368.72 Aligned_cols=261 Identities=28% Similarity=0.383 Sum_probs=205.3
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEcc
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
.++|++.+.||+|+||+||+|.+.. +..||||++... ...+.+.+|++++++++||||+++++++.+ +..|+||||+
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~ 260 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 260 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred hhHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhh
Confidence 3567889999999999999999986 567999998763 356789999999999999999999999865 6789999999
Q ss_pred CCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCC
Q 002063 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~ 833 (973)
++|+|.+++.... ...+++..+..++.|+++||+||| +++|+||||||+||+++.++.+||+|||+++......
T Consensus 261 ~~gsL~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 334 (452)
T 1fmk_A 261 SKGSLLDFLKGET---GKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 334 (452)
T ss_dssp TTCBHHHHHSHHH---HTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTTC------
T ss_pred cCCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEECCCCCEEECCCccceecCCCc
Confidence 9999999997531 234789999999999999999999 7899999999999999999999999999998664332
Q ss_pred CcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhhcccc
Q 002063 834 KVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCE 912 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
. .......++..|+|||++.+..++.++|||||||++|||++ |+.||.... ............
T Consensus 335 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~-----~~~~~~~i~~~~---------- 398 (452)
T 1fmk_A 335 Y-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV-----NREVLDQVERGY---------- 398 (452)
T ss_dssp ---------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC-----HHHHHHHHHTTC----------
T ss_pred e-ecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHHcCC----------
Confidence 1 12223456789999999999999999999999999999999 999996531 111111111110
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCCCCCC
Q 002063 913 VASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPCTDKS 960 (973)
Q Consensus 913 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~~ 960 (973)
....+......+.+++.+||+.||++|||+.++++.|+++.....+.
T Consensus 399 -~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~~~ 445 (452)
T 1fmk_A 399 -RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQ 445 (452)
T ss_dssp -CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCCC
T ss_pred -CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCCcc
Confidence 00111233456889999999999999999999999999987655433
No 161
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1e-38 Score=355.75 Aligned_cols=251 Identities=24% Similarity=0.337 Sum_probs=194.5
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCC--CceeeEeEEEEeCCeeEEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRH--RNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~h--pniv~l~~~~~~~~~~~lv 749 (973)
.+|++.+.||+|+||+||+|.+.. ++.||||++... ...+.+.+|++++++++| |||+++++++..+...|+|
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTT-SCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred CEEEEEEEEecCCCeEEEEEEeCC-CCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 468999999999999999999864 889999998653 234668899999999976 9999999999999999999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccc
Q 002063 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
||+ .+|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++ ++.+||+|||+++..
T Consensus 88 ~e~-~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~al~~lH---~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~ 157 (343)
T 3dbq_A 88 MEC-GNIDLNSWLKKK-----KSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQM 157 (343)
T ss_dssp ECC-CSEEHHHHHHHS-----CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC
T ss_pred EeC-CCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEE-CCcEEEeeccccccc
Confidence 995 588999999853 35789999999999999999999 78999999999999997 678999999999876
Q ss_pred cCCCCcccccccCccccccccccccc-----------CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHh
Q 002063 830 ENSPKVSDYSCFAGTHGYIAPELAYT-----------CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTH 898 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~ 898 (973)
.............||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... .. ......
T Consensus 158 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~---~~-~~~~~~ 233 (343)
T 3dbq_A 158 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN---QI-SKLHAI 233 (343)
T ss_dssp ------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCS---HH-HHHHHH
T ss_pred CcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhh---HH-HHHHHH
Confidence 54433333344679999999999865 6788999999999999999999999975321 11 111111
Q ss_pred hcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 899 LNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
. +.......+......+.+++.+||+.||.+|||+.|++++..
T Consensus 234 ~----------~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~ 276 (343)
T 3dbq_A 234 I----------DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 276 (343)
T ss_dssp H----------CTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred h----------cCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCcc
Confidence 1 111111111112345788999999999999999999998754
No 162
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=3.8e-39 Score=355.43 Aligned_cols=263 Identities=28% Similarity=0.361 Sum_probs=208.9
Q ss_pred hcCCcccCeecccCcEEEEEEEEc-----CCCceEEEEEeeccc---cHHHHHHHHHHHHhc-CCCceeeEeEEEEeCC-
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLK-----KNAGTVAVKQLWKGD---GVKVFAAEMEILGKI-RHRNILKLYACLLKGG- 744 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~-----~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~- 744 (973)
.++|++.+.||+|+||+||+|++. .+++.||||++.... ..+.+.+|+++++++ +||||+++++++..++
T Consensus 26 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 105 (316)
T 2xir_A 26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 105 (316)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS
T ss_pred hhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCC
Confidence 458899999999999999999853 457899999987632 345688999999999 7999999999987754
Q ss_pred eeEEEEEccCCCchHHHHHhhhcCC-----------CCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeec
Q 002063 745 SSFLVLEYMPNGNLFQALHKRVKEG-----------KPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLD 813 (973)
Q Consensus 745 ~~~lv~e~~~~gsL~~~l~~~~~~~-----------~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~ 813 (973)
..++||||+++|+|.+++....... ...+++..+..++.|+++||+||| +.+|+||||||+||+++
T Consensus 106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dikp~Nil~~ 182 (316)
T 2xir_A 106 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLS 182 (316)
T ss_dssp CCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEC
T ss_pred ceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEEC
Confidence 5899999999999999998642110 122789999999999999999999 78999999999999999
Q ss_pred CCCceEEecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHH
Q 002063 814 EDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIV 892 (973)
Q Consensus 814 ~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~ 892 (973)
.++.+||+|||+++...............||+.|+|||++.+..++.++||||+|+++|||++ |+.||...... ....
T Consensus 183 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~-~~~~ 261 (316)
T 2xir_A 183 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFC 261 (316)
T ss_dssp GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCS-HHHH
T ss_pred CCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchh-HHHH
Confidence 999999999999987654433333334567889999999999999999999999999999998 99999754211 1111
Q ss_pred HHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002063 893 YWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 893 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
..+.... .. ..+......+.+++.+||+.||.+||++.|++++|+.+..
T Consensus 262 ~~~~~~~--~~------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 310 (316)
T 2xir_A 262 RRLKEGT--RM------------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310 (316)
T ss_dssp HHHHHTC--CC------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHhccCc--cC------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 1111110 00 0011123468899999999999999999999999987653
No 163
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=3.2e-38 Score=354.94 Aligned_cols=268 Identities=18% Similarity=0.228 Sum_probs=203.4
Q ss_pred HHhcCCcccCeecccCcEEEEEEEEcCC-----CceEEEEEeecccc-------------HHHHHHHHHHHHhcCCCcee
Q 002063 673 EQICNLEEDNLIGSGGTGKVYRLDLKKN-----AGTVAVKQLWKGDG-------------VKVFAAEMEILGKIRHRNIL 734 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~Vy~a~~~~~-----~~~vavK~~~~~~~-------------~~~~~~E~~~l~~l~hpniv 734 (973)
....+|++.+.||+|+||+||+|++..+ ++.||||++..... ...+.+|+..++.++||||+
T Consensus 32 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv 111 (364)
T 3op5_A 32 MAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVP 111 (364)
T ss_dssp TTCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSC
T ss_pred cCCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCC
Confidence 3445899999999999999999999764 57899998865321 11233455566677899999
Q ss_pred eEeEEEEeC----CeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCe
Q 002063 735 KLYACLLKG----GSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNI 810 (973)
Q Consensus 735 ~l~~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Ni 810 (973)
++++++... ...|+||||+ +++|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||
T Consensus 112 ~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~----~~~l~~~~~~~i~~qi~~~l~~lH---~~~iiHrDlkp~Ni 183 (364)
T 3op5_A 112 KYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN----AKRFSRKTVLQLSLRILDILEYIH---EHEYVHGDIKASNL 183 (364)
T ss_dssp CEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHT----TSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGE
T ss_pred eEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEEecCCHHHE
Confidence 999998764 4589999999 99999999763 346899999999999999999999 78999999999999
Q ss_pred eec--CCCceEEecccCCccccCCCCcc-----cccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCc
Q 002063 811 LLD--EDYEPKIADFGVAKIAENSPKVS-----DYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEE 883 (973)
Q Consensus 811 ll~--~~~~~kl~Dfgl~~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~ 883 (973)
+++ .++.+||+|||+++......... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 184 ll~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~ 263 (364)
T 3op5_A 184 LLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWED 263 (364)
T ss_dssp EEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGG
T ss_pred EEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 999 88999999999998664332111 11334599999999999999999999999999999999999999986
Q ss_pred ccCCCccHHHHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002063 884 EYGDGKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 884 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
...+ ........... ...+....+..... ...+..+.+++..||+.||++||++.++++.|+++.
T Consensus 264 ~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~---~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~ 328 (364)
T 3op5_A 264 NLKD-PKYVRDSKIRY--RENIASLMDKCFPA---ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGL 328 (364)
T ss_dssp GTTC-HHHHHHHHHHH--HHCHHHHHHHHSCT---TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred cccC-HHHHHHHHHHh--hhhHHHHHHHhccc---ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Confidence 4322 11111111111 11122222221110 122456889999999999999999999999988653
No 164
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.1e-38 Score=354.02 Aligned_cols=263 Identities=23% Similarity=0.219 Sum_probs=204.6
Q ss_pred HHHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-------ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCC
Q 002063 672 AEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-------DGVKVFAAEMEILGKIRHRNILKLYACLLKGG 744 (973)
Q Consensus 672 ~~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-------~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~ 744 (973)
....++|++.+.||+|+||+||+|++..+++.||||++... ...+.+.+|++++++++||||+++++++.+++
T Consensus 22 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 101 (345)
T 3hko_A 22 LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQ 101 (345)
T ss_dssp HHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCC
Confidence 45567899999999999999999999999999999988652 34567899999999999999999999999999
Q ss_pred eeEEEEEccCCCchHHHHHhhhcC-----------------------------------CCCCcCHHHHHHHHHHHHHHH
Q 002063 745 SSFLVLEYMPNGNLFQALHKRVKE-----------------------------------GKPELDWFRRYKIALGAAKGI 789 (973)
Q Consensus 745 ~~~lv~e~~~~gsL~~~l~~~~~~-----------------------------------~~~~~~~~~~~~i~~~ia~~l 789 (973)
..++||||+++|+|.+++...... ....+++..+..++.|+++||
T Consensus 102 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l 181 (345)
T 3hko_A 102 YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSAL 181 (345)
T ss_dssp EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHH
Confidence 999999999999999988532111 012245677888999999999
Q ss_pred hHhhhcCCCCeEecCCCCCCeeecCCC--ceEEecccCCccccCCCC--cccccccCccccccccccccc--CCCCccch
Q 002063 790 AYLHHDCSPPIIHRDIKSSNILLDEDY--EPKIADFGVAKIAENSPK--VSDYSCFAGTHGYIAPELAYT--CKVSEKSD 863 (973)
Q Consensus 790 ~~LH~~~~~~ivH~Dlkp~Nill~~~~--~~kl~Dfgl~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~--~~~~~~~D 863 (973)
+||| +.+|+||||||+||+++.++ .+||+|||+++....... ........||+.|+|||++.+ ..++.++|
T Consensus 182 ~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~D 258 (345)
T 3hko_A 182 HYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCD 258 (345)
T ss_dssp HHHH---HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHH
T ss_pred HHHH---HCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHH
Confidence 9999 77999999999999998776 899999999986643221 112334578999999999865 67889999
Q ss_pred HHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCH
Q 002063 864 VFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPM 943 (973)
Q Consensus 864 vwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~ 943 (973)
||||||++|||++|+.||.... .............. ............+.+++.+||+.||.+||++
T Consensus 259 iwslG~il~el~~g~~pf~~~~-----~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~ 325 (345)
T 3hko_A 259 AWSAGVLLHLLLMGAVPFPGVN-----DADTISQVLNKKLC--------FENPNYNVLSPLARDLLSNLLNRNVDERFDA 325 (345)
T ss_dssp HHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHCCCC--------TTSGGGGGSCHHHHHHHHHHSCSCTTTSCCH
T ss_pred HHHHHHHHHHHHHCCCCCCCCC-----hHHHHHHHHhcccc--------cCCcccccCCHHHHHHHHHHcCCChhHCCCH
Confidence 9999999999999999996541 11111111111110 0111112234568899999999999999999
Q ss_pred HHHHHHh
Q 002063 944 REVVKML 950 (973)
Q Consensus 944 ~evl~~L 950 (973)
.|++++-
T Consensus 326 ~~~l~hp 332 (345)
T 3hko_A 326 MRALQHP 332 (345)
T ss_dssp HHHHHSH
T ss_pred HHHhcCh
Confidence 9999863
No 165
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=4.1e-38 Score=343.61 Aligned_cols=264 Identities=18% Similarity=0.168 Sum_probs=206.1
Q ss_pred HHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHhcCCCceeeEeEEE-EeCCeeEEEEE
Q 002063 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYACL-LKGGSSFLVLE 751 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~-~~~~~~~lv~e 751 (973)
...++|++.+.||+|+||+||+|++..+++.||||+.......+.+.+|+++++.++|++++..+.++ ..++..++|||
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 4hgt_A 6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEE
Confidence 34568999999999999999999999899999999877766566788999999999988777666655 66788899999
Q ss_pred ccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeee---cCCCceEEecccCCcc
Q 002063 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILL---DEDYEPKIADFGVAKI 828 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill---~~~~~~kl~Dfgl~~~ 828 (973)
|+ +++|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||+++.
T Consensus 86 ~~-~~~L~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~ 157 (296)
T 4hgt_A 86 LL-GPSLEDLFNFC----SRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK 157 (296)
T ss_dssp CC-CCBHHHHHHHT----TSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred cc-CCCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeeeeccCCCCeEEEecCcccee
Confidence 99 99999999753 335899999999999999999999 7899999999999999 7889999999999987
Q ss_pred ccCCCCc-----ccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCC-ccH-HHHHHHhhcc
Q 002063 829 AENSPKV-----SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDG-KDI-VYWVSTHLNN 901 (973)
Q Consensus 829 ~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~-~~~-~~~~~~~~~~ 901 (973)
....... .......||+.|+|||++.+..++.++||||+||++|||++|+.||....... ... ..........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 237 (296)
T 4hgt_A 158 YRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST 237 (296)
T ss_dssp CBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHS
T ss_pred ccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccc
Confidence 6544321 12234578999999999999999999999999999999999999997643221 111 1111111110
Q ss_pred cccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002063 902 HENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
.. ..........+.+++.+||+.||++||++.++++.|+++..
T Consensus 238 ~~-----------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~ 280 (296)
T 4hgt_A 238 PI-----------EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH 280 (296)
T ss_dssp CH-----------HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHH
T ss_pred hh-----------hhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHH
Confidence 00 00011224568899999999999999999999999988643
No 166
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1.8e-38 Score=359.36 Aligned_cols=251 Identities=23% Similarity=0.324 Sum_probs=195.7
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcC--CCceeeEeEEEEeCCeeEEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIR--HRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~--hpniv~l~~~~~~~~~~~lv 749 (973)
.+|++.+.||+|+||+||+|.+.. ++.||||++... ...+.+.+|++++++++ ||||+++++++..++..|+|
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 134 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 134 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEE
Confidence 458999999999999999999876 889999998653 23467889999999996 59999999999999999999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccc
Q 002063 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
|| +.+++|.+++... ..+++..+..++.||+.||+||| +.+|+||||||+||+++ ++.+||+|||+++..
T Consensus 135 ~E-~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~ 204 (390)
T 2zmd_A 135 ME-CGNIDLNSWLKKK-----KSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQM 204 (390)
T ss_dssp EE-CCSEEHHHHHHHC-----SSCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC
T ss_pred Ee-cCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEEE-CCeEEEEecCccccc
Confidence 99 5688999999863 35788899999999999999999 88999999999999995 589999999999876
Q ss_pred cCCCCcccccccCccccccccccccc-----------CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHh
Q 002063 830 ENSPKVSDYSCFAGTHGYIAPELAYT-----------CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTH 898 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~ 898 (973)
.............||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ........
T Consensus 205 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~----~~~~~~~~ 280 (390)
T 2zmd_A 205 QPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN----QISKLHAI 280 (390)
T ss_dssp ---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCC----HHHHHHHH
T ss_pred cCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhH----HHHHHHHH
Confidence 54433223344679999999999865 4688999999999999999999999975321 11111111
Q ss_pred hcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 899 LNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
.. +......+......+.+++.+||+.||.+||++.|++++..
T Consensus 281 ~~----------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~ 323 (390)
T 2zmd_A 281 ID----------PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 323 (390)
T ss_dssp HC----------TTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred hC----------ccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhCcC
Confidence 11 11100111111345788999999999999999999998743
No 167
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=4.5e-38 Score=366.38 Aligned_cols=256 Identities=24% Similarity=0.292 Sum_probs=209.2
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 749 (973)
.++|++.+.||+|+||+||+|+++.+++.||||++.+. .....+.+|++++++++||||+++++++..++..|+|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 46788999999999999999999999999999998753 3456788999999999999999999999999999999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccc
Q 002063 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
|||+++|+|.+++... ......+++..+..++.||+.||+||| +.+|+||||||+||+++.+|.+||+|||+++..
T Consensus 264 mE~~~gg~L~~~l~~~-~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~ 339 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNV-DEDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL 339 (543)
T ss_dssp ECCCTTCBHHHHHHTS-STTSCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEeccCCCHHHHHHHh-hcccccccHHHHHHHHHHHHHHHHHHH---HcCCcccCCChHHEEEeCCCCEEEeecceeeec
Confidence 9999999999999764 222456899999999999999999999 789999999999999999999999999999876
Q ss_pred cCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhc
Q 002063 830 ENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVL 909 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
..... ......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ................
T Consensus 340 ~~~~~--~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~-~~~~~~~~~i~~~~~~----- 411 (543)
T 3c4z_A 340 KAGQT--KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK-VENKELKQRVLEQAVT----- 411 (543)
T ss_dssp CTTCC--CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCC-CCHHHHHHHHHHCCCC-----
T ss_pred cCCCc--ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccc-hhHHHHHHHHhhcccC-----
Confidence 54322 123357999999999999999999999999999999999999999764221 1222222222111110
Q ss_pred cccccChhhHHHHHHHHHHHHHhcCCCCCCCCCH-----HHHHHH
Q 002063 910 DCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPM-----REVVKM 949 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~-----~evl~~ 949 (973)
.+......+.+++.+||+.||.+||++ .++++|
T Consensus 412 -------~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~H 449 (543)
T 3c4z_A 412 -------YPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTH 449 (543)
T ss_dssp -------CCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTS
T ss_pred -------CCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcC
Confidence 112234567889999999999999965 677754
No 168
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3e-38 Score=340.74 Aligned_cols=248 Identities=26% Similarity=0.324 Sum_probs=184.4
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEE
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
.+++|++.+.||+|+||+||+|++..+++.||||++... ...+.+.+|++++++++||||+++++++.+++..++
T Consensus 11 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 90 (275)
T 2eue_A 11 HIGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIM 90 (275)
T ss_dssp BCCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEE
T ss_pred cccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEE
Confidence 346899999999999999999999999999999998652 335678899999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcc
Q 002063 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||+ ++++.+++... ..+++..+..++.|++.|++||| +.+++||||||+||+++.++.+||+|||++..
T Consensus 91 v~e~~-~~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 161 (275)
T 2eue_A 91 VIEYA-GNELFDYIVQR-----DKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNI 161 (275)
T ss_dssp EEECC-CEEHHHHHHTS-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCSSCC--
T ss_pred Eehhc-CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCeeccCChHhEEECCCCCEEEeeccccee
Confidence 99999 77888888643 35889999999999999999999 78999999999999999999999999999976
Q ss_pred ccCCCCcccccccCcccccccccccccCCC-CccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchh
Q 002063 829 AENSPKVSDYSCFAGTHGYIAPELAYTCKV-SEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLK 907 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
...... .....||+.|+|||++.+..+ +.++||||+||++|||++|+.||... ...............
T Consensus 162 ~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~-----~~~~~~~~~~~~~~~--- 230 (275)
T 2eue_A 162 MTDGNF---LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE-----SIPVLFKNISNGVYT--- 230 (275)
T ss_dssp ----------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHTCCC---
T ss_pred ccCccc---ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHHhCCCC---
Confidence 543322 223468999999999987765 68999999999999999999999653 112222211111111
Q ss_pred hccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 908 VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
.+......+.+++.+||+.||.+|||+.|++++-
T Consensus 231 ---------~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h~ 264 (275)
T 2eue_A 231 ---------LPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDD 264 (275)
T ss_dssp ---------CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCH
T ss_pred ---------CCccCCHHHHHHHHHHhhcCHhHCCCHHHHhhCC
Confidence 0112234578899999999999999999998753
No 169
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=3e-38 Score=341.29 Aligned_cols=251 Identities=27% Similarity=0.373 Sum_probs=186.4
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 749 (973)
+++|++.+.||+|+||+||+|++..+++.||||++... ...+.+.+|++++++++||||+++++++.+++..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 45789999999999999999999888999999998653 2346789999999999999999999999999999999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccc
Q 002063 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
|||+++++|.+++... ...+++..+..++.|+++||+||| +.+++||||||+||+++.++.+||+|||.+...
T Consensus 90 ~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~ 162 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNR----VKPFSENEARHFMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQL 162 (278)
T ss_dssp EECCTTEEHHHHHHTC----SSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSSCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EecCCCCcHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEEeecceeec
Confidence 9999999999999753 346899999999999999999999 789999999999999999999999999999866
Q ss_pred cCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhc
Q 002063 830 ENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVL 909 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
..... ......||+.|+|||++.+..++.++||||+|+++|||++|+.||....... ..... .
T Consensus 163 ~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----~~~~~----------~ 225 (278)
T 3cok_A 163 KMPHE--KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKN-----TLNKV----------V 225 (278)
T ss_dssp C------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC----------C----------C
T ss_pred cCCCC--cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHH-----HHHHH----------h
Confidence 43221 1223568999999999998889999999999999999999999997542110 00000 0
Q ss_pred cccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 910 DCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
.... ..+......+.+++.+||+.||++||++.+++++-.
T Consensus 226 ~~~~--~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~ 265 (278)
T 3cok_A 226 LADY--EMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPF 265 (278)
T ss_dssp SSCC--CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSTT
T ss_pred hccc--CCccccCHHHHHHHHHHcccCHhhCCCHHHHhcCcc
Confidence 0000 011123346789999999999999999999998643
No 170
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.5e-38 Score=341.48 Aligned_cols=254 Identities=26% Similarity=0.359 Sum_probs=208.1
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccC
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMP 754 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 754 (973)
++|++.+.||+|+||+||+|++.. ++.||||++... ...+.+.+|++++++++||||+++++++..++..++||||++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~-~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 86 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLN-KDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFME 86 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETT-TEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCT
T ss_pred hheeeeeEecCCCceeEEEEEecC-CCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCC
Confidence 578889999999999999999874 778999998763 355778999999999999999999999999999999999999
Q ss_pred CCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCC
Q 002063 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPK 834 (973)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~ 834 (973)
+++|.+++... ...+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||++.......
T Consensus 87 ~~~L~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~- 158 (267)
T 3t9t_A 87 HGCLSDYLRTQ----RGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ- 158 (267)
T ss_dssp TCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHH-
T ss_pred CCcHHHHHhhC----cccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEECCCCCEEEccccccccccccc-
Confidence 99999999763 345789999999999999999999 7899999999999999999999999999997654321
Q ss_pred cccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhhccccc
Q 002063 835 VSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEV 913 (973)
Q Consensus 835 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (973)
........++..|+|||++.+..++.++||||+|+++|||++ |+.||.... .............
T Consensus 159 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-----~~~~~~~i~~~~~---------- 223 (267)
T 3t9t_A 159 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS-----NSEVVEDISTGFR---------- 223 (267)
T ss_dssp HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-----HHHHHHHHHTTCC----------
T ss_pred ccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCC-----HHHHHHHHhcCCc----------
Confidence 112223457789999999998899999999999999999999 899997531 1111111111100
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002063 914 ASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 914 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
...+......+.+++.+||+.||++||++.+++++|+++.
T Consensus 224 -~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~ 263 (267)
T 3t9t_A 224 -LYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIA 263 (267)
T ss_dssp -CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -CCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 0011122346888999999999999999999999998764
No 171
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=2e-38 Score=351.96 Aligned_cols=256 Identities=22% Similarity=0.231 Sum_probs=204.5
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHhc-CCCceeeEeEEEEeCCeeEEEEEc
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~ 752 (973)
..++|++.+.||+|+||+||+|+++.+++.||||++.+... ...+|++++.++ +||||+++++++.+++..|+||||
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~--~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~ 97 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR--DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTEL 97 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC--CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECC
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC--ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeC
Confidence 35678999999999999999999999999999999876432 245788899888 799999999999999999999999
Q ss_pred cCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCC----CceEEecccCCcc
Q 002063 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDED----YEPKIADFGVAKI 828 (973)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~----~~~kl~Dfgl~~~ 828 (973)
+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||++..+ +.+||+|||+++.
T Consensus 98 ~~gg~L~~~i~~~-----~~~~~~~~~~~~~qi~~al~~lH---~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~ 169 (342)
T 2qr7_A 98 MKGGELLDKILRQ-----KFFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQ 169 (342)
T ss_dssp CCSCBHHHHHHTC-----TTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEE
T ss_pred CCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcEeccCCHHHEEEecCCCCcCeEEEEECCCccc
Confidence 9999999999753 35889999999999999999999 7899999999999998543 3599999999987
Q ss_pred ccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhh
Q 002063 829 AENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKV 908 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (973)
...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||..... ...............
T Consensus 170 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~~~~i~~~~~----- 240 (342)
T 2qr7_A 170 LRAENG--LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPD--DTPEEILARIGSGKF----- 240 (342)
T ss_dssp CBCTTC--CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTT--SCHHHHHHHHHHCCC-----
T ss_pred CcCCCC--ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCc--CCHHHHHHHHccCCc-----
Confidence 654322 22345789999999999888899999999999999999999999975321 222222222111111
Q ss_pred ccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 909 LDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
.............+.+++.+||+.||++||++.++++|-.
T Consensus 241 ---~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~ 280 (342)
T 2qr7_A 241 ---SLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPW 280 (342)
T ss_dssp ---CCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHH
T ss_pred ---ccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCe
Confidence 0011112233456889999999999999999999998644
No 172
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.2e-38 Score=345.50 Aligned_cols=259 Identities=26% Similarity=0.372 Sum_probs=209.7
Q ss_pred cCHHHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHhcCCCceeeEeEEEEe-------
Q 002063 670 IDAEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYACLLK------- 742 (973)
Q Consensus 670 ~~~~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~------- 742 (973)
++.....+|++.+.||+|+||.||+|++..+++.||||++.... +.+.+|++++++++||||+++++++..
T Consensus 5 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (284)
T 2a19_B 5 VDKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN--EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPET 82 (284)
T ss_dssp CCHHHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS--GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---
T ss_pred ccchhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc--HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccc
Confidence 34566678999999999999999999999889999999987643 356789999999999999999998864
Q ss_pred ---------CCeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeec
Q 002063 743 ---------GGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLD 813 (973)
Q Consensus 743 ---------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~ 813 (973)
....++||||+++|+|.+++.... ...+++..+..++.|++.||+||| +.+|+||||||+||+++
T Consensus 83 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~ 156 (284)
T 2a19_B 83 SSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR---GEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLV 156 (284)
T ss_dssp ------CCEEEEEEEEECCCCSCBHHHHHHHGG---GSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEE
T ss_pred ccccccccCcceEEEEEeccCCCCHHHHHhhcc---CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHEEEc
Confidence 345799999999999999998642 345889999999999999999999 78999999999999999
Q ss_pred CCCceEEecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHH
Q 002063 814 EDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVY 893 (973)
Q Consensus 814 ~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~ 893 (973)
.++.+||+|||++........ .....|++.|+|||++.+..++.++||||||+++|||++|..|+.... .
T Consensus 157 ~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~-------~ 226 (284)
T 2a19_B 157 DTKQVKIGDFGLVTSLKNDGK---RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS-------K 226 (284)
T ss_dssp ETTEEEECCCTTCEESSCCSC---CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH-------H
T ss_pred CCCCEEECcchhheecccccc---ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH-------H
Confidence 999999999999987654322 223468999999999999999999999999999999999998875321 1
Q ss_pred HHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCCCCCC
Q 002063 894 WVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPCTDKS 960 (973)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~~ 960 (973)
...... . .... ......+.+++.+||+.||.+||++.|++++|+.+....++.
T Consensus 227 ~~~~~~-~---------~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~~~ 279 (284)
T 2a19_B 227 FFTDLR-D---------GIIS----DIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEKN 279 (284)
T ss_dssp HHHHHH-T---------TCCC----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-----
T ss_pred HHHHhh-c---------cccc----ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCCcc
Confidence 111110 0 0011 112345778999999999999999999999999987665443
No 173
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=3.1e-38 Score=348.13 Aligned_cols=261 Identities=21% Similarity=0.275 Sum_probs=200.0
Q ss_pred hcCCccc-CeecccCcEEEEEEEEcCCCceEEEEEeecc--ccHHHHHHHHHHHHhc-CCCceeeEeEEEEeCCeeEEEE
Q 002063 675 ICNLEED-NLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG--DGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 675 ~~~~~~~-~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~ 750 (973)
.+.|++. +.||+|+||+||+|++..+++.||||++... ...+.+.+|++++.++ +||||+++++++.+++..|+||
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~ 90 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF 90 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence 3567774 7899999999999999988999999998663 3467789999999985 7999999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCc---eEEecccCCc
Q 002063 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYE---PKIADFGVAK 827 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~---~kl~Dfgl~~ 827 (973)
||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++. +||+|||++.
T Consensus 91 e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~ 162 (316)
T 2ac3_A 91 EKMRGGSILSHIHKR-----RHFNELEASVVVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGS 162 (316)
T ss_dssp ECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC
T ss_pred EcCCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEEccCCCcCceEEEEccCcc
Confidence 999999999999864 35789999999999999999999 779999999999999998776 9999999987
Q ss_pred cccCCCC-----cccccccCccccccccccccc-----CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCcc-------
Q 002063 828 IAENSPK-----VSDYSCFAGTHGYIAPELAYT-----CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKD------- 890 (973)
Q Consensus 828 ~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~------- 890 (973)
....... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||.........
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~ 242 (316)
T 2ac3_A 163 GIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEAC 242 (316)
T ss_dssp -------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CC
T ss_pred ccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccc
Confidence 6542211 111223468999999999875 56889999999999999999999999764321100
Q ss_pred ---HHHHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 891 ---IVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 891 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
............. .............+.+++.+||+.||.+|||+.|++++-.
T Consensus 243 ~~~~~~~~~~i~~~~~--------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~ 298 (316)
T 2ac3_A 243 PACQNMLFESIQEGKY--------EFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPW 298 (316)
T ss_dssp HHHHHHHHHHHHHCCC--------CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTT
T ss_pred hhHHHHHHHHHhccCc--------ccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChh
Confidence 0001111111000 0000111123456889999999999999999999998743
No 174
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.7e-38 Score=352.11 Aligned_cols=245 Identities=28% Similarity=0.348 Sum_probs=205.3
Q ss_pred HHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc----------cHHHHHHHHHHHHhcCCCceeeEeEEEEe
Q 002063 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD----------GVKVFAAEMEILGKIRHRNILKLYACLLK 742 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~----------~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 742 (973)
...++|++.+.||+|+||+||+|++..+++.||||++.... ....+.+|++++++++||||+++++++..
T Consensus 21 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~ 100 (335)
T 3dls_A 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFEN 100 (335)
T ss_dssp HHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred ccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEee
Confidence 34578999999999999999999999999999999987632 23356789999999999999999999999
Q ss_pred CCeeEEEEEccCCC-chHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEe
Q 002063 743 GGSSFLVLEYMPNG-NLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIA 821 (973)
Q Consensus 743 ~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 821 (973)
++..++||||+.+| +|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+
T Consensus 101 ~~~~~lv~e~~~~g~~l~~~~~~~-----~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~ 172 (335)
T 3dls_A 101 QGFFQLVMEKHGSGLDLFAFIDRH-----PRLDEPLASYIFRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLI 172 (335)
T ss_dssp SSEEEEEEECCTTSCBHHHHHHTC-----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEEC
T ss_pred CCEEEEEEEeCCCCccHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEEeccCHHHEEEcCCCcEEEe
Confidence 99999999999777 999998753 35899999999999999999999 7899999999999999999999999
Q ss_pred cccCCccccCCCCcccccccCcccccccccccccCCC-CccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhc
Q 002063 822 DFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKV-SEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLN 900 (973)
Q Consensus 822 Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~ 900 (973)
|||++........ .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||......
T Consensus 173 Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------------- 236 (335)
T 3dls_A 173 DFGSAAYLERGKL---FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET------------- 236 (335)
T ss_dssp CCTTCEECCTTCC---BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG-------------
T ss_pred ecccceECCCCCc---eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH-------------
Confidence 9999987654322 223568999999999988877 78999999999999999999999653110
Q ss_pred ccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 901 NHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
....... +......+.+++.+||++||++||++.+++++-.
T Consensus 237 ----~~~~~~~------~~~~~~~l~~li~~~L~~dP~~Rps~~ell~hp~ 277 (335)
T 3dls_A 237 ----VEAAIHP------PYLVSKELMSLVSGLLQPVPERRTTLEKLVTDPW 277 (335)
T ss_dssp ----TTTCCCC------SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHCTT
T ss_pred ----HhhccCC------CcccCHHHHHHHHHHccCChhhCcCHHHHhcCcc
Confidence 0000000 1112346889999999999999999999999854
No 175
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=2.1e-38 Score=366.20 Aligned_cols=250 Identities=26% Similarity=0.302 Sum_probs=198.4
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEE
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
..++|++.+.||+|+||+||+|++..+++.||||++... .....+.+|+++++.++||||+++++++..++..|+
T Consensus 146 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 225 (446)
T 4ejn_A 146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCF 225 (446)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEE
T ss_pred ChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEE
Confidence 346799999999999999999999999999999998752 334567789999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCC-CCeEecCCCCCCeeecCCCceEEecccCCc
Q 002063 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCS-PPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~-~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
||||+++|+|.+++... ..+++..+..++.|++.||+||| + .+|+||||||+||+++.++.+||+|||+++
T Consensus 226 v~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~ 297 (446)
T 4ejn_A 226 VMEYANGGELFFHLSRE-----RVFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 297 (446)
T ss_dssp EECCCSSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCCCGGGEEECSSSCEEECCCCCCC
T ss_pred EEeeCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHh---hcCCEEECCCCHHHEEECCCCCEEEccCCCce
Confidence 99999999999999764 35889999999999999999999 5 799999999999999999999999999997
Q ss_pred cccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchh
Q 002063 828 IAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLK 907 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||.... ..............
T Consensus 298 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~-----~~~~~~~i~~~~~~--- 367 (446)
T 4ejn_A 298 EGIKDG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-----HEKLFELILMEEIR--- 367 (446)
T ss_dssp TTCC-------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHCCCC---
T ss_pred eccCCC--cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCC-----HHHHHHHHHhCCCC---
Confidence 543221 22334679999999999999999999999999999999999999996531 11222221111110
Q ss_pred hccccccChhhHHHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHHh
Q 002063 908 VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRP-----PMREVVKML 950 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----t~~evl~~L 950 (973)
.+......+.+++.+||+.||.+|| ++.|+++|-
T Consensus 368 ---------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp 406 (446)
T 4ejn_A 368 ---------FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHR 406 (446)
T ss_dssp ---------CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSG
T ss_pred ---------CCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCc
Confidence 0112235678999999999999999 999998754
No 176
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=5.6e-38 Score=347.08 Aligned_cols=250 Identities=25% Similarity=0.307 Sum_probs=196.2
Q ss_pred hcCCcccCeecccCcEEEEEEEEc---CCCceEEEEEeecc------ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCe
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLK---KNAGTVAVKQLWKG------DGVKVFAAEMEILGKIRHRNILKLYACLLKGGS 745 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~---~~~~~vavK~~~~~------~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~ 745 (973)
.++|++.+.||+|+||+||+|+.. .+++.||||++.+. .....+.+|++++++++||||+++++++..++.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 457899999999999999999985 57899999998753 234557889999999999999999999999999
Q ss_pred eEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccC
Q 002063 746 SFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGV 825 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl 825 (973)
.|+||||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~ 167 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLERE-----GIFMEDTACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGL 167 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTSCEEECCCSC
T ss_pred EEEEEeCCCCCcHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHH---hCCEEcccCCHHHeEECCCCcEEEEeCCc
Confidence 99999999999999999764 24788899999999999999999 78999999999999999999999999999
Q ss_pred CccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccc
Q 002063 826 AKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENV 905 (973)
Q Consensus 826 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 905 (973)
++....... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.... ..............
T Consensus 168 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-----~~~~~~~i~~~~~~- 239 (327)
T 3a62_A 168 CKESIHDGT--VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGEN-----RKKTIDKILKCKLN- 239 (327)
T ss_dssp C------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHTCCC-
T ss_pred ccccccCCc--cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHhCCCC-
Confidence 875432211 1233568999999999999999999999999999999999999997531 11111111111110
Q ss_pred hhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHHhh
Q 002063 906 LKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRP-----PMREVVKMLA 951 (973)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----t~~evl~~L~ 951 (973)
.+......+.+++.+||+.||.+|| ++.|+++|-.
T Consensus 240 -----------~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~ 279 (327)
T 3a62_A 240 -----------LPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPF 279 (327)
T ss_dssp -----------CCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGG
T ss_pred -----------CCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCc
Confidence 0112245678899999999999999 7888887643
No 177
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=4.2e-38 Score=363.81 Aligned_cols=262 Identities=26% Similarity=0.279 Sum_probs=198.0
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeC------
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKG------ 743 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~------ 743 (973)
..++|++.+.||+|+||+||+|++..+++.||||++... ...+++.+|+++++.++||||+++++++...
T Consensus 60 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 139 (464)
T 3ttj_A 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF 139 (464)
T ss_dssp EETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred ecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence 356899999999999999999999999999999998753 3456788999999999999999999999654
Q ss_pred CeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecc
Q 002063 744 GSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADF 823 (973)
Q Consensus 744 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 823 (973)
...|+||||+++ ++.+.+.. .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+||
T Consensus 140 ~~~~lv~E~~~~-~l~~~~~~-------~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDlkp~NIll~~~~~~kl~DF 208 (464)
T 3ttj_A 140 QDVYLVMELMDA-NLCQVIQM-------ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDF 208 (464)
T ss_dssp CEEEEEEECCSE-EHHHHHTS-------CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCC
T ss_pred CeEEEEEeCCCC-CHHHHHhh-------cCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChHhEEEeCCCCEEEEEE
Confidence 457999999965 56666532 3789999999999999999999 789999999999999999999999999
Q ss_pred cCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHH------
Q 002063 824 GVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVST------ 897 (973)
Q Consensus 824 gl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~------ 897 (973)
|+++...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.+... .......+..
T Consensus 209 G~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~-~~~~~~i~~~lg~p~~ 284 (464)
T 3ttj_A 209 GLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY-IDQWNKVIEQLGTPCP 284 (464)
T ss_dssp CCC-----CC---CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCSCCH
T ss_pred EeeeecCCCc---ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHhcCCCCH
Confidence 9998664432 23346789999999999999999999999999999999999999975311 0000000000
Q ss_pred ------------hhccccc-----chhhcccc---ccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 898 ------------HLNNHEN-----VLKVLDCE---VASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 898 ------------~~~~~~~-----~~~~~~~~---~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
....... ....+... ............+.+++.+||+.||++|||+.|+++|-
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp 357 (464)
T 3ttj_A 285 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 357 (464)
T ss_dssp HHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTST
T ss_pred HHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcCh
Confidence 0000000 00000000 01111223356789999999999999999999999874
No 178
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=2.6e-38 Score=348.10 Aligned_cols=261 Identities=23% Similarity=0.313 Sum_probs=198.5
Q ss_pred hcCCcccCeecccCcEEEEEEEEcC---CCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCC---
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKK---NAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGG--- 744 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~---~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~--- 744 (973)
..+|++.+.||+|+||+||+|++.. ++..||||++... ...+.+.+|++++++++||||+++++++...+
T Consensus 33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 112 (313)
T 3brb_A 33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQG 112 (313)
T ss_dssp GGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-----
T ss_pred HHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccC
Confidence 4578999999999999999998865 4558999998652 33466889999999999999999999997654
Q ss_pred --eeEEEEEccCCCchHHHHHhhhc-CCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEe
Q 002063 745 --SSFLVLEYMPNGNLFQALHKRVK-EGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIA 821 (973)
Q Consensus 745 --~~~lv~e~~~~gsL~~~l~~~~~-~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 821 (973)
..++||||+++|+|.+++..... .....+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+
T Consensus 113 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kl~ 189 (313)
T 3brb_A 113 IPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTVCVA 189 (313)
T ss_dssp --CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCSGGGEEECTTSCEEEC
T ss_pred CcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEEe
Confidence 35999999999999999965422 23456899999999999999999999 8899999999999999999999999
Q ss_pred cccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhc
Q 002063 822 DFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLN 900 (973)
Q Consensus 822 Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~ 900 (973)
|||++................+++.|+|||++.+..++.++||||||+++|||++ |..||.... .......+..
T Consensus 190 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~--~~~~~~~~~~--- 264 (313)
T 3brb_A 190 DFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQ--NHEMYDYLLH--- 264 (313)
T ss_dssp SCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--GGGHHHHHHT---
T ss_pred ecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCC--HHHHHHHHHc---
Confidence 9999987654433233334567889999999999999999999999999999999 889996542 1121111111
Q ss_pred ccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002063 901 NHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
... ...+......+.+++.+||+.||.+||++.+++++|+++.
T Consensus 265 ~~~-----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~ 307 (313)
T 3brb_A 265 GHR-----------LKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLL 307 (313)
T ss_dssp TCC-----------CCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCC-----------CCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 100 0111223456889999999999999999999999998764
No 179
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=2.9e-38 Score=354.08 Aligned_cols=244 Identities=26% Similarity=0.302 Sum_probs=193.2
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc-----cHHHHHHHHHH-HHhcCCCceeeEeEEEEeCCeeE
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-----GVKVFAAEMEI-LGKIRHRNILKLYACLLKGGSSF 747 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~-l~~l~hpniv~l~~~~~~~~~~~ 747 (973)
..++|++.+.||+|+||+||+|+++.+++.||||++.+.. ....+.+|..+ ++.++||||+++++++.+++..|
T Consensus 36 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~ 115 (373)
T 2r5t_A 36 KPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLY 115 (373)
T ss_dssp CGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEE
T ss_pred ChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEE
Confidence 3467899999999999999999999999999999987632 23445667666 56789999999999999999999
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCc
Q 002063 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
+||||+++|+|.+++... ..+++..+..++.|++.||+||| +++|+||||||+||+++.+|.+||+|||+++
T Consensus 116 lv~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~ikL~DFG~a~ 187 (373)
T 2r5t_A 116 FVLDYINGGELFYHLQRE-----RCFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCK 187 (373)
T ss_dssp EEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCBCG
T ss_pred EEEeCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEeeCcccc
Confidence 999999999999999764 24788899999999999999999 7899999999999999999999999999998
Q ss_pred cccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchh
Q 002063 828 IAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLK 907 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||... +..............
T Consensus 188 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~-----~~~~~~~~i~~~~~~--- 257 (373)
T 2r5t_A 188 ENIEHN--STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR-----NTAEMYDNILNKPLQ--- 257 (373)
T ss_dssp GGBCCC--CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCS-----BHHHHHHHHHHSCCC---
T ss_pred ccccCC--CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCC-----CHHHHHHHHHhcccC---
Confidence 643221 1233467999999999999999999999999999999999999999653 122222222111110
Q ss_pred hccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHH
Q 002063 908 VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMR 944 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~ 944 (973)
. .......+.+++.+||+.||.+||++.
T Consensus 258 -----~----~~~~~~~~~~li~~lL~~dp~~R~~~~ 285 (373)
T 2r5t_A 258 -----L----KPNITNSARHLLEGLLQKDRTKRLGAK 285 (373)
T ss_dssp -----C----CSSSCHHHHHHHHHHTCSSGGGSTTTT
T ss_pred -----C----CCCCCHHHHHHHHHHcccCHHhCCCCC
Confidence 0 112234578899999999999999985
No 180
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=6.8e-38 Score=344.99 Aligned_cols=255 Identities=24% Similarity=0.330 Sum_probs=204.7
Q ss_pred HHHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEE
Q 002063 672 AEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 672 ~~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 751 (973)
.....+|++.+.||+|+||+||+|++..+++.||||++......+.+.+|++++++++||||+++++++..++..|+|||
T Consensus 25 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 104 (314)
T 3com_A 25 KQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME 104 (314)
T ss_dssp -----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hcchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence 44566899999999999999999999999999999999887777889999999999999999999999999999999999
Q ss_pred ccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccC
Q 002063 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~ 831 (973)
|+++|+|.+++... ...+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||.+.....
T Consensus 105 ~~~~~~L~~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 177 (314)
T 3com_A 105 YCGAGSVSDIIRLR----NKTLTEDEIATILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTD 177 (314)
T ss_dssp CCTTEEHHHHHHHH----TCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECBT
T ss_pred cCCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCcCHHHEEECCCCCEEEeecccchhhhh
Confidence 99999999999743 345889999999999999999999 78999999999999999999999999999976643
Q ss_pred CCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccc
Q 002063 832 SPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDC 911 (973)
Q Consensus 832 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (973)
... ......|++.|+|||++.+..++.++||||+|+++|+|++|+.||.... ............. .
T Consensus 178 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~-------~ 243 (314)
T 3com_A 178 TMA--KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIH-----PMRAIFMIPTNPP-------P 243 (314)
T ss_dssp TBS--CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSC-----HHHHHHHHHHSCC-------C
T ss_pred hcc--ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHhcCCC-------c
Confidence 321 2233568999999999999899999999999999999999999997531 1111111111110 0
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 912 EVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 912 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
.. .........+.+++.+||+.||.+||++.+++++
T Consensus 244 ~~--~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 244 TF--RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQH 279 (314)
T ss_dssp CC--SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred cc--CCcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 00 0112234568899999999999999999999874
No 181
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.4e-37 Score=339.53 Aligned_cols=263 Identities=20% Similarity=0.247 Sum_probs=201.5
Q ss_pred HHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc-----cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeE
Q 002063 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-----GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSF 747 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 747 (973)
...++|++.+.||+|+||+||+|++..+++.||||++.... ..+.+.+|++++++++||||+++++++..++..|
T Consensus 31 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~ 110 (309)
T 2h34_A 31 TQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLY 110 (309)
T ss_dssp ---CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEE
T ss_pred cEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEE
Confidence 44678999999999999999999999889999999986531 2367889999999999999999999999999999
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCc
Q 002063 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
+||||+++++|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.
T Consensus 111 lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~ 182 (309)
T 2h34_A 111 VDMRLINGVDLAAMLRRQ-----GPLAPPRAVAIVRQIGSALDAAH---AAGATHRDVKPENILVSADDFAYLVDFGIAS 182 (309)
T ss_dssp EEEECCCCEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSCCC--
T ss_pred EEEEecCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCcCCcCCCChHHEEEcCCCCEEEecCccCc
Confidence 999999999999999864 25889999999999999999999 7899999999999999999999999999987
Q ss_pred cccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchh
Q 002063 828 IAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLK 907 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
....... .......|++.|+|||++.+..++.++||||||+++|||++|+.||.... .. ..............
T Consensus 183 ~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~-~~~~~~~~~~~~~~ 255 (309)
T 2h34_A 183 ATTDEKL-TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQ-----LS-VMGAHINQAIPRPS 255 (309)
T ss_dssp ---------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCH-----HH-HHHHHHHSCCCCGG
T ss_pred ccccccc-ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCch-----HH-HHHHHhccCCCCcc
Confidence 6643321 22234568999999999999999999999999999999999999997531 11 11111111110000
Q ss_pred hccccccChhhHHHHHHHHHHHHHhcCCCCCCCC-CHHHHHHHhhcCCCCCC
Q 002063 908 VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRP-PMREVVKMLADADPCTD 958 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-t~~evl~~L~~~~~~~~ 958 (973)
.........+.+++.+||+.||++|| ++.++++.|+.......
T Consensus 256 --------~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~ 299 (309)
T 2h34_A 256 --------TVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATAD 299 (309)
T ss_dssp --------GTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC---
T ss_pred --------ccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhc
Confidence 11122334688899999999999999 99999999998866554
No 182
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.2e-38 Score=350.10 Aligned_cols=258 Identities=27% Similarity=0.406 Sum_probs=200.3
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCC----ceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNA----GTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSF 747 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~----~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 747 (973)
..+|++.+.||+|+||+||+|++..++ ..||||++... .....+.+|++++++++||||+++++++...+..+
T Consensus 43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 122 (333)
T 1mqb_A 43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM 122 (333)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcE
Confidence 346788899999999999999987543 35999998753 23456889999999999999999999999999999
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCc
Q 002063 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
+||||+++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++
T Consensus 123 lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 195 (333)
T 1mqb_A 123 IITEYMENGALDKFLREK----DGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSR 195 (333)
T ss_dssp EEEECCTTEEHHHHHHHT----TTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC--
T ss_pred EEEeCCCCCcHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChheEEECCCCcEEECCCCcch
Confidence 999999999999999753 346899999999999999999999 7899999999999999999999999999998
Q ss_pred cccCCCCc-ccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccc
Q 002063 828 IAENSPKV-SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENV 905 (973)
Q Consensus 828 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 905 (973)
........ .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||.... .. ...........
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~--~~---~~~~~~~~~~~-- 268 (333)
T 1mqb_A 196 VLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELS--NH---EVMKAINDGFR-- 268 (333)
T ss_dssp ---------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--HH---HHHHHHHTTCC--
T ss_pred hhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCC--HH---HHHHHHHCCCc--
Confidence 76543221 11223456789999999998999999999999999999999 999996531 11 11111111100
Q ss_pred hhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002063 906 LKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
..........+.+++.+||+.||++||++.+++++|+++..
T Consensus 269 ---------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~ 309 (333)
T 1mqb_A 269 ---------LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIR 309 (333)
T ss_dssp ---------CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred ---------CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 00111234568899999999999999999999999987643
No 183
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=8.6e-39 Score=345.78 Aligned_cols=260 Identities=23% Similarity=0.332 Sum_probs=207.4
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEe--CCeeEE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLK--GGSSFL 748 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~--~~~~~l 748 (973)
.++|++.+.||+|+||+||+|++..+++.||+|++... ...+.+.+|++++++++||||+++++++.. +...++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 46889999999999999999999999999999998752 345668899999999999999999998854 578999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCC-----eEecCCCCCCeeecCCCceEEecc
Q 002063 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPP-----IIHRDIKSSNILLDEDYEPKIADF 823 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~-----ivH~Dlkp~Nill~~~~~~kl~Df 823 (973)
||||+++|+|.+++..... ....+++..+..++.|++.||+||| +.+ ++||||||+||+++.++.+||+||
T Consensus 85 v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~df 160 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTK-ERQYLDEEFVLRVMTQLTLALKECH---RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDF 160 (279)
T ss_dssp EEECCTTEEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHH---HHC------CCCCCSGGGEEECSSSCEEECCC
T ss_pred EEeCCCCCCHHHHHHhhcc-cCCCCCHHHHHHHHHHHHHHHHHHh---cccCCCCeeEEeccchhhEEEcCCCCEEEecC
Confidence 9999999999999986532 3445899999999999999999999 556 999999999999999999999999
Q ss_pred cCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccc
Q 002063 824 GVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHE 903 (973)
Q Consensus 824 gl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 903 (973)
|.+........ ......|++.|+|||++.+..++.++||||||+++|+|++|+.||.... .......+... ..
T Consensus 161 g~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--~~~~~~~i~~~---~~ 233 (279)
T 2w5a_A 161 GLARILNHDTS--FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS--QKELAGKIREG---KF 233 (279)
T ss_dssp CHHHHC---CH--HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHT---CC
T ss_pred chheeeccccc--cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccC--HHHHHHHHhhc---cc
Confidence 99876643321 1223468999999999998899999999999999999999999997541 11111111111 00
Q ss_pred cchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCC
Q 002063 904 NVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPC 956 (973)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~ 956 (973)
. ..+......+.+++.+||+.||++||++.|+++++....+.
T Consensus 234 -------~----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~ 275 (279)
T 2w5a_A 234 -------R----RIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILEHH 275 (279)
T ss_dssp -------C----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGGG
T ss_pred -------c----cCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhhc
Confidence 0 01112345688999999999999999999999988766543
No 184
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1.4e-38 Score=352.45 Aligned_cols=265 Identities=25% Similarity=0.330 Sum_probs=205.7
Q ss_pred HHHhcCCcccCeecccCcEEEEEEE-----EcCCCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeC
Q 002063 672 AEQICNLEEDNLIGSGGTGKVYRLD-----LKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKG 743 (973)
Q Consensus 672 ~~~~~~~~~~~~lG~G~~g~Vy~a~-----~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~ 743 (973)
.....+|++.+.||+|+||+||+|+ ...+++.||||++... ....++.+|+.++++++||||+++++++..+
T Consensus 26 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 105 (327)
T 2yfx_A 26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 105 (327)
T ss_dssp BCCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred cCChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCC
Confidence 3445789999999999999999999 4456789999998642 3456788999999999999999999999999
Q ss_pred CeeEEEEEccCCCchHHHHHhhhcC--CCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecC---CCce
Q 002063 744 GSSFLVLEYMPNGNLFQALHKRVKE--GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE---DYEP 818 (973)
Q Consensus 744 ~~~~lv~e~~~~gsL~~~l~~~~~~--~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~---~~~~ 818 (973)
...|+||||+++|+|.+++...... ....+++..+..++.|++.||+||| +.+|+||||||+||+++. +..+
T Consensus 106 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~i~H~dlkp~NIli~~~~~~~~~ 182 (327)
T 2yfx_A 106 LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVA 182 (327)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCE
T ss_pred CCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeecCcCCHhHEEEecCCCcceE
Confidence 9999999999999999999875221 1245889999999999999999999 789999999999999984 4469
Q ss_pred EEecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHH
Q 002063 819 KIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVST 897 (973)
Q Consensus 819 kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~ 897 (973)
||+|||++................||+.|+|||++.+..++.++||||||+++|||++ |+.||.... .......+.
T Consensus 183 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~--~~~~~~~~~- 259 (327)
T 2yfx_A 183 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS--NQEVLEFVT- 259 (327)
T ss_dssp EECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--HHHHHHHHH-
T ss_pred EECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcC--HHHHHHHHh-
Confidence 9999999986654433333344568899999999998999999999999999999998 999996531 111111111
Q ss_pred hhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002063 898 HLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
.... ..........+.+++.+||+.||.+||++.+++++++.+..
T Consensus 260 --~~~~-----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~ 304 (327)
T 2yfx_A 260 --SGGR-----------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 304 (327)
T ss_dssp --TTCC-----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --cCCC-----------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhc
Confidence 1100 00111234468899999999999999999999999997643
No 185
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=9.9e-38 Score=338.22 Aligned_cols=250 Identities=24% Similarity=0.301 Sum_probs=203.5
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc--------ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG--------DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSF 747 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~--------~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 747 (973)
++|++.+.||+|+||+||+|++..+++.||||++... ...+.+.+|++++++++||||+++++++..+...+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 4688999999999999999999988999999988652 13677899999999999999999999999999999
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCC----ceEEecc
Q 002063 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDY----EPKIADF 823 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~----~~kl~Df 823 (973)
+||||+++++|.+++... ..+++..+..++.|++.||+||| +.+++||||||+||+++.++ .+||+||
T Consensus 85 lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~~~~kl~df 156 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEK-----ESLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDF 156 (283)
T ss_dssp EEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSSSSCCEEECCC
T ss_pred EEEeecCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChHHEEEecCCCCCCceEEEec
Confidence 999999999999999753 35889999999999999999999 78999999999999998877 8999999
Q ss_pred cCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccc
Q 002063 824 GVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHE 903 (973)
Q Consensus 824 gl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 903 (973)
|.+........ .....|++.|+|||++.+..++.++||||+|+++|+|++|+.||.... .............
T Consensus 157 g~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~ 228 (283)
T 3bhy_A 157 GIAHKIEAGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGET-----KQETLTNISAVNY 228 (283)
T ss_dssp TTCEECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHHHTTCC
T ss_pred ccceeccCCCc---ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcc-----hHHHHHHhHhccc
Confidence 99986644322 233568999999999998899999999999999999999999997541 1111111111110
Q ss_pred cchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 904 NVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
.............+.+++.+||+.||++||++.|++++
T Consensus 229 --------~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 266 (283)
T 3bhy_A 229 --------DFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEH 266 (283)
T ss_dssp --------CCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHC
T ss_pred --------CCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhC
Confidence 01111112234568899999999999999999999985
No 186
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=2.5e-38 Score=350.46 Aligned_cols=260 Identities=27% Similarity=0.389 Sum_probs=206.9
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceE--EEEEeec---cccHHHHHHHHHHHHhc-CCCceeeEeEEEEeCCeeE
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTV--AVKQLWK---GDGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSF 747 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~v--avK~~~~---~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~ 747 (973)
..++|++.+.||+|+||+||+|++..++..+ |||++.. ....+.+.+|+++++++ +||||+++++++..++..|
T Consensus 23 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 102 (327)
T 1fvr_A 23 DWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 102 (327)
T ss_dssp CGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred cHHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceE
Confidence 3468999999999999999999998878755 9998865 23455688999999999 9999999999999999999
Q ss_pred EEEEccCCCchHHHHHhhhc-----------CCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCC
Q 002063 748 LVLEYMPNGNLFQALHKRVK-----------EGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDY 816 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~-----------~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~ 816 (973)
+||||+++|+|.+++..... .....+++..+..++.|+++||+||| +.+|+||||||+||+++.++
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~ 179 (327)
T 1fvr_A 103 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENY 179 (327)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGG
T ss_pred EEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCccceEEEcCCC
Confidence 99999999999999976420 22346899999999999999999999 78999999999999999999
Q ss_pred ceEEecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHH
Q 002063 817 EPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWV 895 (973)
Q Consensus 817 ~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~ 895 (973)
.+||+|||+++..... .......+++.|+|||++.+..++.++||||+||++|||++ |+.||.... .....
T Consensus 180 ~~kL~Dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~-----~~~~~ 251 (327)
T 1fvr_A 180 VAKIADFGLSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT-----CAELY 251 (327)
T ss_dssp CEEECCTTCEESSCEE---CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC-----HHHHH
T ss_pred eEEEcccCcCcccccc---ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCc-----HHHHH
Confidence 9999999998743221 11223456889999999998889999999999999999998 999996541 11121
Q ss_pred HHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002063 896 STHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
....... ...........+.+++.+||+.||.+||++.+++++|+++..
T Consensus 252 ~~~~~~~-----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 300 (327)
T 1fvr_A 252 EKLPQGY-----------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 300 (327)
T ss_dssp HHGGGTC-----------CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHhhcCC-----------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 1111110 001112234568899999999999999999999999997643
No 187
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.8e-38 Score=343.48 Aligned_cols=257 Identities=27% Similarity=0.366 Sum_probs=203.2
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCc---eEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCee-EEE
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAG---TVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSS-FLV 749 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~---~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~-~lv 749 (973)
.|+..+.||+|+||+||+|++..+++ .||+|++... ...+.+.+|++++++++||||+++++++.+++.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 45677899999999999999765444 7999988653 3446788999999999999999999999876555 999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccc
Q 002063 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
|||+.+|+|.+++... ...+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||+++..
T Consensus 102 ~e~~~~~~L~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~ 174 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSP----QRNPTVKDLISFGLQVARGMEYLA---EQKFVHRDLAARNCMLDESFTVKVADFGLARDI 174 (298)
T ss_dssp ECCCTTCBHHHHHHCT----TCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECCTTSSCTT
T ss_pred EecccCCCHHHHHhcc----ccCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEeCcCCCcccc
Confidence 9999999999999752 345789999999999999999999 789999999999999999999999999999765
Q ss_pred cCCCC--cccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchh
Q 002063 830 ENSPK--VSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLK 907 (973)
Q Consensus 830 ~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
..... ........+++.|+|||.+.+..++.++||||+|+++|+|++|..|+.... +..+....+.....
T Consensus 175 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~-~~~~~~~~~~~~~~------- 246 (298)
T 3pls_A 175 LDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHI-DPFDLTHFLAQGRR------- 246 (298)
T ss_dssp TTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS-CGGGHHHHHHTTCC-------
T ss_pred cCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccC-CHHHHHHHhhcCCC-------
Confidence 43221 122233567899999999999999999999999999999999666553321 22222222221110
Q ss_pred hccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002063 908 VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
..........+.+++.+||+.||.+|||+.++++.|+++..
T Consensus 247 -------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~ 287 (298)
T 3pls_A 247 -------LPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVS 287 (298)
T ss_dssp -------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -------CCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 00111223468899999999999999999999999998743
No 188
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.8e-38 Score=342.12 Aligned_cols=255 Identities=24% Similarity=0.326 Sum_probs=204.7
Q ss_pred cCCcccC-eecccCcEEEEEEEEc--CCCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEE
Q 002063 676 CNLEEDN-LIGSGGTGKVYRLDLK--KNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 676 ~~~~~~~-~lG~G~~g~Vy~a~~~--~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 749 (973)
++|.+.+ .||+|+||+||+|.+. .++..||||++... ...+.+.+|++++++++||||+++++++ ..+..++|
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv 87 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV 87 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence 3455655 8999999999999864 45778999998763 3456788999999999999999999998 55678999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccc
Q 002063 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
|||+++++|.+++... ...+++..+..++.|+++||+||| +.+++||||||+||+++.++.+||+|||++...
T Consensus 88 ~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~ 160 (287)
T 1u59_A 88 MEMAGGGPLHKFLVGK----REEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKAL 160 (287)
T ss_dssp EECCTTEEHHHHHTTC----TTTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEeCCCCCHHHHHHhC----CccCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCchheEEEcCCCCEEECcccceeee
Confidence 9999999999998642 345899999999999999999999 789999999999999999999999999999877
Q ss_pred cCCCCc-ccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchh
Q 002063 830 ENSPKV-SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLK 907 (973)
Q Consensus 830 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
...... .......+|+.|+|||++.+..++.++||||+|+++|||++ |+.||.... .......+.. ...
T Consensus 161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~--~~~~~~~i~~---~~~---- 231 (287)
T 1u59_A 161 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK--GPEVMAFIEQ---GKR---- 231 (287)
T ss_dssp TTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC--THHHHHHHHT---TCC----
T ss_pred ccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC--HHHHHHHHhc---CCc----
Confidence 543222 12233456889999999988889999999999999999998 999997542 1222211111 100
Q ss_pred hccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002063 908 VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
...+......+.+++.+||+.||++||++.+++++|+.+.
T Consensus 232 -------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 271 (287)
T 1u59_A 232 -------MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY 271 (287)
T ss_dssp -------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -------CCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 0111233456889999999999999999999999999764
No 189
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=5.5e-38 Score=346.91 Aligned_cols=264 Identities=21% Similarity=0.248 Sum_probs=197.6
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccccH---HHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEc
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGV---KVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~---~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 752 (973)
++|++.+.||+|+||+||+|++..+++.||||++...... ..+.+|++++++++||||+++++++..++..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 5789999999999999999999988999999988653321 2345799999999999999999999999999999999
Q ss_pred cCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCC
Q 002063 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENS 832 (973)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~ 832 (973)
++ |+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 82 ~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 153 (324)
T 3mtl_A 82 LD-KDLKQYLDDC----GNIINMHNVKLFLFQLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIP 153 (324)
T ss_dssp CS-EEHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCCGGGEEECTTCCEEECSSSEEECC---
T ss_pred cc-cCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCcCHHHEEECCCCCEEEccCcccccccCC
Confidence 96 6999998764 345889999999999999999999 789999999999999999999999999998755432
Q ss_pred CCcccccccCccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccc--cchhhc
Q 002063 833 PKVSDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHE--NVLKVL 909 (973)
Q Consensus 833 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 909 (973)
. .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.... ..+....+........ ......
T Consensus 154 ~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~~ 229 (324)
T 3mtl_A 154 T--KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGST--VEEQLHFIFRILGTPTEETWPGIL 229 (324)
T ss_dssp -----------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCCCCTTTSTTGG
T ss_pred c--cccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHhCCCChHhchhhh
Confidence 2 22233568999999999876 568999999999999999999999997542 1111111111111100 000000
Q ss_pred c---------ccccC----hhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 910 D---------CEVAS----ESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 910 ~---------~~~~~----~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
. +.... .........+.+++.+|++.||.+|||+.|++++-.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 284 (324)
T 3mtl_A 230 SNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPF 284 (324)
T ss_dssp GCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGG
T ss_pred cchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChh
Confidence 0 00000 011123456789999999999999999999998543
No 190
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.9e-38 Score=342.79 Aligned_cols=251 Identities=28% Similarity=0.412 Sum_probs=199.5
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHhcCCCceeeEeEEEEeC-CeeEEEEEcc
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYACLLKG-GSSFLVLEYM 753 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-~~~~lv~e~~ 753 (973)
.++|++.+.||+|+||+||+|++. ++.||||++......+.+.+|++++++++||||+++++++... +..++||||+
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~ 97 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 97 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCCC--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCC
T ss_pred hhhceEEeEEecCCCceEEEEEEc--CCEEEEEEecchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecC
Confidence 468899999999999999999885 7899999998877778899999999999999999999987554 5789999999
Q ss_pred CCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCC
Q 002063 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~ 833 (973)
++|+|.+++.... ...+++..+..++.|+++|++||| +.+++||||||+||+++.++.+||+|||++.......
T Consensus 98 ~~~~L~~~l~~~~---~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 171 (278)
T 1byg_A 98 AKGSLVDYLRSRG---RSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ 171 (278)
T ss_dssp TTEEHHHHHHHHH---HHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC--------
T ss_pred CCCCHHHHHHhcc---cccCCHHHHHHHHHHHHHHHHHHH---hCCccccCCCcceEEEeCCCcEEEeeccccccccccc
Confidence 9999999997642 223788899999999999999999 7899999999999999999999999999987554321
Q ss_pred CcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhhcccc
Q 002063 834 KVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCE 912 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
....+++.|+|||++.+..++.++||||+|+++|||++ |+.||.... ..+....+. ..
T Consensus 172 -----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~--~~~~~~~~~---~~----------- 230 (278)
T 1byg_A 172 -----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP--LKDVVPRVE---KG----------- 230 (278)
T ss_dssp ---------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSC--GGGHHHHHT---TT-----------
T ss_pred -----cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHh---cC-----------
Confidence 12356889999999999999999999999999999998 999997542 122111111 00
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002063 913 VASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 913 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
............+.+++.+||+.||++||++.|+++.|+++.
T Consensus 231 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~ 272 (278)
T 1byg_A 231 YKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 272 (278)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHH
Confidence 001111223456889999999999999999999999998764
No 191
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=5.7e-38 Score=341.52 Aligned_cols=253 Identities=25% Similarity=0.297 Sum_probs=202.3
Q ss_pred cCCcccC-eecccCcEEEEEEEE--cCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEE
Q 002063 676 CNLEEDN-LIGSGGTGKVYRLDL--KKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 676 ~~~~~~~-~lG~G~~g~Vy~a~~--~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
.+|++.+ .||+|+||+||+|.+ ..+++.||||++... ...+.+.+|+++++.++||||+++++++ ..+..++
T Consensus 16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~l 94 (291)
T 1xbb_A 16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWML 94 (291)
T ss_dssp GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEE
T ss_pred hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEE
Confidence 4677777 999999999999955 456788999998653 2356789999999999999999999998 5677899
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcc
Q 002063 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||+++++|.+++... ..+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||++..
T Consensus 95 v~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 166 (291)
T 1xbb_A 95 VMEMAELGPLNKYLQQN-----RHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA 166 (291)
T ss_dssp EEECCTTEEHHHHHHHC-----TTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEeCCCCCHHHHHHhC-----cCCCHHHHHHHHHHHHHHHHHHH---hCCeEcCCCCcceEEEeCCCcEEEccCCccee
Confidence 99999999999999753 34889999999999999999999 78999999999999999999999999999987
Q ss_pred ccCCCCcc-cccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccch
Q 002063 829 AENSPKVS-DYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVL 906 (973)
Q Consensus 829 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (973)
........ ......+++.|+|||++.+..++.++||||||+++|||++ |+.||.... .......+. ...
T Consensus 167 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~--~~~~~~~~~----~~~--- 237 (291)
T 1xbb_A 167 LRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK--GSEVTAMLE----KGE--- 237 (291)
T ss_dssp CCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCC--HHHHHHHHH----TTC---
T ss_pred eccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCC--HHHHHHHHH----cCC---
Confidence 65443221 1223456789999999988889999999999999999999 999997541 111111111 110
Q ss_pred hhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcC
Q 002063 907 KVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADA 953 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 953 (973)
....+......+.+++.+||+.||.+||++.++++.|+++
T Consensus 238 -------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 277 (291)
T 1xbb_A 238 -------RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 277 (291)
T ss_dssp -------CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred -------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 0011123345688999999999999999999999999875
No 192
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=1.5e-37 Score=337.94 Aligned_cols=247 Identities=26% Similarity=0.320 Sum_probs=198.9
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEe----CCeeEE
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLK----GGSSFL 748 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~----~~~~~l 748 (973)
.|++.+.||+|+||+||+|.+..++..||+|++... ...+.+.+|++++++++||||+++++++.. +...++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 467888999999999999999999999999988652 345668899999999999999999999875 356899
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCC--eEecCCCCCCeeec-CCCceEEecccC
Q 002063 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPP--IIHRDIKSSNILLD-EDYEPKIADFGV 825 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~--ivH~Dlkp~Nill~-~~~~~kl~Dfgl 825 (973)
||||+++|+|.+++... ..+++..+..++.|++.||+||| +.+ ++||||||+||+++ .++.+||+|||+
T Consensus 107 v~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~ 178 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKRF-----KVMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGL 178 (290)
T ss_dssp EEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEEECCTTG
T ss_pred EEEecCCCCHHHHHHHc-----cCCCHHHHHHHHHHHHHHHHHHH---cCCCCEEECCCCHHHEEEECCCCCEEEeeCCC
Confidence 99999999999999764 35789999999999999999999 667 99999999999998 789999999999
Q ss_pred CccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccc
Q 002063 826 AKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENV 905 (973)
Q Consensus 826 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 905 (973)
+...... ......||+.|+|||++. +.++.++||||+||++|+|++|+.||.... ...............
T Consensus 179 ~~~~~~~----~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~----~~~~~~~~~~~~~~~- 248 (290)
T 1t4h_A 179 ATLKRAS----FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQ----NAAQIYRRVTSGVKP- 248 (290)
T ss_dssp GGGCCTT----SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCS----SHHHHHHHHTTTCCC-
T ss_pred ccccccc----ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcC----cHHHHHHHHhccCCc-
Confidence 9754332 122356899999999886 458999999999999999999999996532 112222211111110
Q ss_pred hhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 906 LKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
..........+.+++.+||+.||.+||++.|++++-
T Consensus 249 ---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~ 284 (290)
T 1t4h_A 249 ---------ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHA 284 (290)
T ss_dssp ---------GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred ---------cccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhCc
Confidence 011111234688999999999999999999999763
No 193
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-37 Score=349.73 Aligned_cols=263 Identities=22% Similarity=0.310 Sum_probs=197.3
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeC------C
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKG------G 744 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~------~ 744 (973)
..+|++.+.||+|+||+||+|++..+|+.||||++... ...+++.+|+++++.++||||+++++++..+ .
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 35789999999999999999999999999999998542 2345678999999999999999999999765 3
Q ss_pred eeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEeccc
Q 002063 745 SSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFG 824 (973)
Q Consensus 745 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 824 (973)
..|+||||+ +++|.+++... .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~------~l~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 173 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHE------KLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFG 173 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCT
T ss_pred eEEEEEecC-CCCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCHHHEEEcCCCCEEEEeee
Confidence 469999999 88999998752 4788999999999999999999 7899999999999999999999999999
Q ss_pred CCccccCCCCcccccccCccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccc
Q 002063 825 VAKIAENSPKVSDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHE 903 (973)
Q Consensus 825 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 903 (973)
+++..... .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||..... .+....+........
T Consensus 174 ~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~~~l~~i~~~~g~~~ 246 (367)
T 1cm8_A 174 LARQADSE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDH--LDQLKEIMKVTGTPP 246 (367)
T ss_dssp TCEECCSS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHHHCCCC
T ss_pred cccccccc-----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHhcCCCC
Confidence 99865432 233568999999999877 6799999999999999999999999975421 111111100000000
Q ss_pred -cc---------hhh---cc---ccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH--hhcCC
Q 002063 904 -NV---------LKV---LD---CEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM--LADAD 954 (973)
Q Consensus 904 -~~---------~~~---~~---~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~--L~~~~ 954 (973)
.. ... +. ..............+.+++.+|++.||.+|||+.|+++| +++..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~ 315 (367)
T 1cm8_A 247 AEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH 315 (367)
T ss_dssp HHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred HHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhc
Confidence 00 000 00 000001112234568899999999999999999999996 44443
No 194
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.6e-37 Score=363.02 Aligned_cols=252 Identities=27% Similarity=0.352 Sum_probs=205.4
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeec----cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEE
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK----GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~----~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 749 (973)
..++|++.+.||+|+||+||+|++..+++.||||++.. ......+.+|++++++++||||+++++++..+...|+|
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 99 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence 45679999999999999999999999999999999865 34567789999999999999999999999999999999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeec---CCCceEEecccCC
Q 002063 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLD---EDYEPKIADFGVA 826 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~---~~~~~kl~Dfgl~ 826 (973)
|||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++ .++.+||+|||++
T Consensus 100 ~e~~~~~~L~~~~~~~-----~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a 171 (486)
T 3mwu_A 100 GELYTGGELFDEIIKR-----KRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS 171 (486)
T ss_dssp ECCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEESSSSTTCCEEECSCSCT
T ss_pred EEcCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEEECCcC
Confidence 9999999999998764 35889999999999999999999 78999999999999995 4567999999999
Q ss_pred ccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccch
Q 002063 827 KIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVL 906 (973)
Q Consensus 827 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (973)
+...... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||.... .............
T Consensus 172 ~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~-----~~~~~~~i~~~~~--- 239 (486)
T 3mwu_A 172 TCFQQNT---KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN-----EYDILKRVETGKY--- 239 (486)
T ss_dssp TTBCCC-------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHTCC---
T ss_pred eECCCCC---ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhCCC---
Confidence 8664432 2234579999999999875 58999999999999999999999996531 1111111111110
Q ss_pred hhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 907 KVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
.............+.+++.+||+.||.+|||+.++++|-
T Consensus 240 -----~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp 278 (486)
T 3mwu_A 240 -----AFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHP 278 (486)
T ss_dssp -----CSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCH
T ss_pred -----CCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCH
Confidence 000111223345688999999999999999999999874
No 195
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=2.4e-37 Score=335.39 Aligned_cols=247 Identities=28% Similarity=0.368 Sum_probs=205.9
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 749 (973)
.++|++.+.||+|+||+||+|++..+++.||||++... .....+.+|++++++++||||+++++++.+++..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 46789999999999999999999998999999998652 2356788999999999999999999999999999999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccc
Q 002063 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
|||+++|+|.+++... ..+++..+..++.|++.|++||| +.+++||||||+||+++.++.+||+|||++...
T Consensus 93 ~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~ 164 (284)
T 2vgo_A 93 LEFAPRGELYKELQKH-----GRFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHA 164 (284)
T ss_dssp ECCCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEeCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEEcCCCCEEEecccccccC
Confidence 9999999999999864 24789999999999999999999 889999999999999999999999999998765
Q ss_pred cCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhc
Q 002063 830 ENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVL 909 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
.... .....|++.|+|||++.+..++.++||||+|+++|+|++|+.||.... .............
T Consensus 165 ~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~~~~~~~~~~~~------ 229 (284)
T 2vgo_A 165 PSLR----RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPS-----HTETHRRIVNVDL------ 229 (284)
T ss_dssp SSSC----BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHHHTTCC------
T ss_pred cccc----cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCC-----HhHHHHHHhcccc------
Confidence 4321 223568999999999999999999999999999999999999997531 1111111111110
Q ss_pred cccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 910 DCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
.. +......+.+++.+|++.||.+||++.+++++-
T Consensus 230 --~~----~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~ 264 (284)
T 2vgo_A 230 --KF----PPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHP 264 (284)
T ss_dssp --CC----CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTCH
T ss_pred --CC----CCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhCH
Confidence 11 112234678899999999999999999999753
No 196
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.6e-37 Score=363.03 Aligned_cols=350 Identities=17% Similarity=0.149 Sum_probs=274.1
Q ss_pred cceEEccCCcCCCCCCcccccCCCCCCEEEcccccCCCCCChhhhccCCCCeeeccccccccccchhhhccccccEEEee
Q 002063 170 LVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELY 249 (973)
Q Consensus 170 L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~ 249 (973)
-+.++.+++.++ .+|..+. +++++|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|++|+|+
T Consensus 13 ~~~v~c~~~~l~--~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~ 88 (477)
T 2id5_A 13 DRAVLCHRKRFV--AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLR 88 (477)
T ss_dssp TTEEECCSCCCS--SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEEeCCCCcC--cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECC
Confidence 357888888886 5677664 689999999999999889999999999999999999998889999999999999999
Q ss_pred cccCCCCCCccccccccccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCccccceeeccccccCCCC
Q 002063 250 ANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPF 329 (973)
Q Consensus 250 ~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 329 (973)
+|++++..+..|.++++|++|+|++|++.+..|..+.++++|+.|++++|.+.+..+..|..+++|+.|++++|++++..
T Consensus 89 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 168 (477)
T 2id5_A 89 SNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIP 168 (477)
T ss_dssp SSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCC
T ss_pred CCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccC
Confidence 99999766677899999999999999999888999999999999999999999998999999999999999999999877
Q ss_pred CccccccccccccccccccccccCChhhhhhhhHHHHHhhhccCCCCCCCcccCccccceEecccccccccCCccccCCC
Q 002063 330 PENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALP 409 (973)
Q Consensus 330 ~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 409 (973)
+..+..+++|+.|+|++|.+.+. .+..|..+++|++|++++|.+.+.+|..+..
T Consensus 169 ~~~l~~l~~L~~L~l~~n~i~~~------------------------~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~-- 222 (477)
T 2id5_A 169 TEALSHLHGLIVLRLRHLNINAI------------------------RDYSFKRLYRLKVLEISHWPYLDTMTPNCLY-- 222 (477)
T ss_dssp HHHHTTCTTCCEEEEESCCCCEE------------------------CTTCSCSCTTCCEEEEECCTTCCEECTTTTT--
T ss_pred hhHhcccCCCcEEeCCCCcCcEe------------------------ChhhcccCcccceeeCCCCccccccCccccc--
Confidence 77788888888888888877632 2234566677777777777665555544433
Q ss_pred CcceEeccCCcCCCCCCCccCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEecCCCcCCCCccccccccccCCEEEcc
Q 002063 410 NVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLE 489 (973)
Q Consensus 410 ~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 489 (973)
..+|++|+|++|++++..+..+..+++|+.|+|++|++++..+..|..+++|+.|+|+
T Consensus 223 ----------------------~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 280 (477)
T 2id5_A 223 ----------------------GLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLV 280 (477)
T ss_dssp ----------------------TCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECC
T ss_pred ----------------------CccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECC
Confidence 3356666666666664433566677777777777777776666667777777777777
Q ss_pred CcccccCCCccccCccccchhhccccccccCCCccccccCCCCeeecCCCccCCCCCchhhcccCceEEccCCccccccC
Q 002063 490 ENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLKLSSIDLSENQLSGSVP 569 (973)
Q Consensus 490 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~L~~l~ls~N~l~~~~p 569 (973)
+|++++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|+++...+.....-....+++.+|...|..|
T Consensus 281 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p 360 (477)
T 2id5_A 281 GGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATP 360 (477)
T ss_dssp SSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGGHHHHTTTTSSCCTTCCCBEEES
T ss_pred CCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccchHhHHhhhhccccCccCceeCCc
Confidence 77777777777777777777777777777666666777777888888888777543322111113445667777777777
Q ss_pred cc
Q 002063 570 LD 571 (973)
Q Consensus 570 ~~ 571 (973)
..
T Consensus 361 ~~ 362 (477)
T 2id5_A 361 EF 362 (477)
T ss_dssp GG
T ss_pred hH
Confidence 54
No 197
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1e-37 Score=355.79 Aligned_cols=281 Identities=21% Similarity=0.227 Sum_probs=212.7
Q ss_pred cccccccccccccCHHHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-ccHHHHHHHHHHHHhcC-------
Q 002063 658 SKWKLASFHHIDIDAEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIR------- 729 (973)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~------- 729 (973)
..+....++...++....++|++.+.||+|+||+||+|++..+++.||||++... ...+.+.+|++++++++
T Consensus 19 ~~~~~~~~~~~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~ 98 (397)
T 1wak_A 19 NDYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDP 98 (397)
T ss_dssp ---CC--CCSSCTTCEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCG
T ss_pred ccCCCCCceEEehhhhcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCC
Confidence 3344455666666666678999999999999999999999999999999998764 34567889999999985
Q ss_pred -CCceeeEeEEEE----eCCeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCC-CeEec
Q 002063 730 -HRNILKLYACLL----KGGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSP-PIIHR 803 (973)
Q Consensus 730 -hpniv~l~~~~~----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~-~ivH~ 803 (973)
||||+++++++. .+...++||||+ ++++.+++... ....+++..+..++.|++.||+||| ++ +|+||
T Consensus 99 ~~~~iv~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~---~~~~~~~~~~~~i~~qi~~aL~~lH---~~~givHr 171 (397)
T 1wak_A 99 NREMVVQLLDDFKISGVNGTHICMVFEVL-GHHLLKWIIKS---NYQGLPLPCVKKIIQQVLQGLDYLH---TKCRIIHT 171 (397)
T ss_dssp GGGGBCCEEEEEEEEETTEEEEEEEECCC-CCBHHHHHHHT---TTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECC
T ss_pred CcceeeeeecceeecCCCCceEEEEEecc-CccHHHHHHhc---ccCCCCHHHHHHHHHHHHHHHHHHH---HhCCEecC
Confidence 788999999987 456789999999 66777777643 2345899999999999999999999 66 99999
Q ss_pred CCCCCCeeecCCC-------------------------------------------------ceEEecccCCccccCCCC
Q 002063 804 DIKSSNILLDEDY-------------------------------------------------EPKIADFGVAKIAENSPK 834 (973)
Q Consensus 804 Dlkp~Nill~~~~-------------------------------------------------~~kl~Dfgl~~~~~~~~~ 834 (973)
||||+|||++.++ .+||+|||.+......
T Consensus 172 Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-- 249 (397)
T 1wak_A 172 DIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-- 249 (397)
T ss_dssp CCSGGGEEECCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC--
T ss_pred CCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc--
Confidence 9999999999775 7999999999866432
Q ss_pred cccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCc--cH--HHHHHHhhccccc------
Q 002063 835 VSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGK--DI--VYWVSTHLNNHEN------ 904 (973)
Q Consensus 835 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~--~~--~~~~~~~~~~~~~------ 904 (973)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||........ +. ...+.......+.
T Consensus 250 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 326 (397)
T 1wak_A 250 ---FTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAG 326 (397)
T ss_dssp ---SCSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHC
T ss_pred ---CccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcc
Confidence 2334689999999999999999999999999999999999999976432211 11 1111111100000
Q ss_pred --chhhcccc-------------------ccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 905 --VLKVLDCE-------------------VASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 905 --~~~~~~~~-------------------~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
....+... .......+....+.+++.+||+.||++|||+.|+++|-
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp 393 (397)
T 1wak_A 327 KYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHP 393 (397)
T ss_dssp TTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSG
T ss_pred cccccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCc
Confidence 00000000 00012356677899999999999999999999999763
No 198
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=4.9e-38 Score=340.19 Aligned_cols=255 Identities=25% Similarity=0.326 Sum_probs=202.6
Q ss_pred hcCCcccCeecccCcEEEEEEEEcC---CCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKK---NAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~---~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
.++|++.+.||+|+||+||+|++.. ++..||||++... ...+.+.+|++++++++||||+++++++.+ +..++
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~ 89 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWI 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEE
Confidence 4578999999999999999999764 2446999998763 345678899999999999999999998765 45789
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcc
Q 002063 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||+++++|.+++... ...+++..+..++.|+++||+||| +.+++||||||+||+++.++.+||+|||++..
T Consensus 90 v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 162 (281)
T 3cc6_A 90 IMELYPYGELGHYLERN----KNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRY 162 (281)
T ss_dssp EEECCTTCBHHHHHHHH----TTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEEETTEEEECCCCGGGC
T ss_pred EEecCCCCCHHHHHHhc----cccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEECCCCcEEeCccCCCcc
Confidence 99999999999999764 335789999999999999999999 78999999999999999999999999999986
Q ss_pred ccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchh
Q 002063 829 AENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLK 907 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
...... .......+++.|+|||++.+..++.++||||||+++|||++ |+.||.... ..+....+..... .
T Consensus 163 ~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~--~~~~~~~~~~~~~--~---- 233 (281)
T 3cc6_A 163 IEDEDY-YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLE--NKDVIGVLEKGDR--L---- 233 (281)
T ss_dssp C----------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC--GGGHHHHHHHTCC--C----
T ss_pred cccccc-cccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCC--hHHHHHHHhcCCC--C----
Confidence 644322 12233457889999999998899999999999999999998 999997542 2222222211100 0
Q ss_pred hccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002063 908 VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
..+......+.+++.+||+.||++||++.|++++|+++.
T Consensus 234 --------~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~ 272 (281)
T 3cc6_A 234 --------PKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVY 272 (281)
T ss_dssp --------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --------CCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHH
Confidence 001122346889999999999999999999999998753
No 199
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=2.8e-38 Score=350.13 Aligned_cols=267 Identities=21% Similarity=0.231 Sum_probs=197.0
Q ss_pred HHHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc----cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeE
Q 002063 672 AEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD----GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSF 747 (973)
Q Consensus 672 ~~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 747 (973)
....++|++.+.||+|+||+||+|++..+++.||||++.... ....+.+|++++++++||||+++++++..++..+
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (329)
T 3gbz_A 30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLH 109 (329)
T ss_dssp --CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEE
T ss_pred ccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEE
Confidence 345678999999999999999999999999999999986532 2345778999999999999999999999999999
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeec-----CCCceEEec
Q 002063 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLD-----EDYEPKIAD 822 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~-----~~~~~kl~D 822 (973)
+||||++ |+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++ .++.+||+|
T Consensus 110 lv~e~~~-~~L~~~~~~~-----~~~~~~~~~~i~~ql~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~D 180 (329)
T 3gbz_A 110 LIFEYAE-NDLKKYMDKN-----PDVSMRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGD 180 (329)
T ss_dssp EEEECCS-EEHHHHHHHC-----TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEC-----CCEEEECC
T ss_pred EEEecCC-CCHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCEECCCCCHHHEEEecCCCCccceEEECc
Confidence 9999997 5999999753 34889999999999999999999 78999999999999994 455699999
Q ss_pred ccCCccccCCCCcccccccCcccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcc
Q 002063 823 FGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNN 901 (973)
Q Consensus 823 fgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~ 901 (973)
||+++....... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||.... ..+....+......
T Consensus 181 fg~a~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--~~~~~~~~~~~~~~ 256 (329)
T 3gbz_A 181 FGLARAFGIPIR--QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDS--EIDQLFKIFEVLGL 256 (329)
T ss_dssp TTHHHHHC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHHHCC
T ss_pred CCCccccCCccc--ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCC--HHHHHHHHHHHhCC
Confidence 999987643322 22335689999999999774 48999999999999999999999996541 11111111111000
Q ss_pred cc--cchhh------c--cccccCh-----hhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 902 HE--NVLKV------L--DCEVASE-----SIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 902 ~~--~~~~~------~--~~~~~~~-----~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
.. ..... . .+..... ........+.+++.+||+.||++|||+.|+++|-.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 321 (329)
T 3gbz_A 257 PDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPY 321 (329)
T ss_dssp CCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGG
T ss_pred CchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcc
Confidence 00 00000 0 0000000 01113456889999999999999999999998643
No 200
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=3.9e-38 Score=349.44 Aligned_cols=268 Identities=25% Similarity=0.344 Sum_probs=203.1
Q ss_pred cCHHHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc----cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCe
Q 002063 670 IDAEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD----GVKVFAAEMEILGKIRHRNILKLYACLLKGGS 745 (973)
Q Consensus 670 ~~~~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~ 745 (973)
+.....++|++.+.||+|+||+||+|++..+++.||||++.... ..+.+.+|++++++++||||+++++++..++.
T Consensus 19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 98 (331)
T 4aaa_A 19 LYFQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKR 98 (331)
T ss_dssp CCCBCGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE
T ss_pred hhhhhhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCE
Confidence 33455678999999999999999999999999999999886532 24457789999999999999999999999999
Q ss_pred eEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccC
Q 002063 746 SFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGV 825 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl 825 (973)
.++||||+++++|.++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+
T Consensus 99 ~~lv~e~~~~~~l~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 170 (331)
T 4aaa_A 99 WYLVFEFVDHTILDDLELF-----PNGLDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGF 170 (331)
T ss_dssp EEEEEECCSEEHHHHHHHS-----TTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCTT
T ss_pred EEEEEecCCcchHHHHHhh-----ccCCCHHHHHHHHHHHHHHHHHHH---HCCEEccCcChheEEEcCCCcEEEEeCCC
Confidence 9999999999988887653 235889999999999999999999 78999999999999999999999999999
Q ss_pred CccccCCCCcccccccCcccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhc----
Q 002063 826 AKIAENSPKVSDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLN---- 900 (973)
Q Consensus 826 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~---- 900 (973)
++....... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||..... .+....+.....
T Consensus 171 ~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~~~~~~~~~~~ 246 (331)
T 4aaa_A 171 ARTLAAPGE--VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSD--IDQLYHIMMCLGNLIP 246 (331)
T ss_dssp C--------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHHCSCCH
T ss_pred ceeecCCcc--ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCc--HHHHHHHHHHhCCCCh
Confidence 976643322 22335689999999998775 789999999999999999999999975421 111111110000
Q ss_pred -------ccccch-----hhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 901 -------NHENVL-----KVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 901 -------~~~~~~-----~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
..+... ..................+.+++.+||+.||++|||+.|++++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 247 RHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp HHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred hhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 000000 0000000001112335678999999999999999999999875
No 201
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=6e-38 Score=351.07 Aligned_cols=265 Identities=18% Similarity=0.163 Sum_probs=207.9
Q ss_pred hcCCcccCeecccCcEEEEEEEEcC--------CCceEEEEEeeccccHHHHHHHHHHHHhcCCCceee-----------
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKK--------NAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILK----------- 735 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~--------~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hpniv~----------- 735 (973)
.++|++.+.||+|+||+||+|++.. .++.||||++... +.+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 117 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD---GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLL 117 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT---STHHHHHHHHHHHCCHHHHHHHHHHTTCTTC
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc---chHHHHHHHHHHhcccchhhhhhhhccCCcc
Confidence 3689999999999999999999987 4789999998765 35789999999999999987
Q ss_pred ----EeEEEEe-CCeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCe
Q 002063 736 ----LYACLLK-GGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNI 810 (973)
Q Consensus 736 ----l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Ni 810 (973)
+++++.. +...|+||||+ +++|.+++... ....+++..+..++.|++.||+||| +.+|+||||||+||
T Consensus 118 ~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~---~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NI 190 (352)
T 2jii_A 118 AIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVS---PKHVLSERSVLQVACRLLDALEFLH---ENEYVHGNVTAENI 190 (352)
T ss_dssp SCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHS---GGGCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCGGGE
T ss_pred CccchhhccccCCcEEEEEecCC-CcCHHHHHHhC---CcCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHE
Confidence 6777766 77889999999 99999999863 1346899999999999999999999 78999999999999
Q ss_pred eecCCC--ceEEecccCCccccCCCCc-----ccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCc
Q 002063 811 LLDEDY--EPKIADFGVAKIAENSPKV-----SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEE 883 (973)
Q Consensus 811 ll~~~~--~~kl~Dfgl~~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~ 883 (973)
+++.++ .+||+|||+++........ .......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 191 l~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 270 (352)
T 2jii_A 191 FVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTN 270 (352)
T ss_dssp EEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGG
T ss_pred EEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 999998 8999999999866432211 112334789999999999999999999999999999999999999986
Q ss_pred ccCCCccHHHHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002063 884 EYGDGKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 884 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
..................... ..+... ........+.+++.+||+.||++||++.++++.|+++..
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 336 (352)
T 2jii_A 271 CLPNTEDIMKQKQKFVDKPGP---FVGPCG---HWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQ 336 (352)
T ss_dssp GTTCHHHHHHHHHHHHHSCCC---EECTTS---CEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHhccCChhh---hhhhcc---ccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHH
Confidence 533322232222222111111 111100 001123568899999999999999999999999998754
No 202
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=4.7e-37 Score=336.84 Aligned_cols=253 Identities=25% Similarity=0.315 Sum_probs=201.3
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc------ccHHHHHHHHHHHHhcCCCceeeEeEEEE--eCCe
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG------DGVKVFAAEMEILGKIRHRNILKLYACLL--KGGS 745 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~------~~~~~~~~E~~~l~~l~hpniv~l~~~~~--~~~~ 745 (973)
..++|++.+.||+|+||.||+|.+..+++.||||++... ...+.+.+|++++++++||||+++++++. +...
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK 82 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe
Confidence 357899999999999999999999999999999998653 34567899999999999999999999984 4567
Q ss_pred eEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccC
Q 002063 746 SFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGV 825 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl 825 (973)
.++||||++++ |.+++... ....+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||.
T Consensus 83 ~~lv~e~~~~~-l~~~~~~~---~~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~NIl~~~~~~~kl~dfg~ 155 (305)
T 2wtk_C 83 MYMVMEYCVCG-MQEMLDSV---PEKRFPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGV 155 (305)
T ss_dssp EEEEEECCSEE-HHHHHHHS---TTCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred EEEEehhccCC-HHHHHHhC---cccccCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEcCCCcEEeecccc
Confidence 89999999766 77777653 3446899999999999999999999 78999999999999999999999999999
Q ss_pred CccccCCCCcccccccCcccccccccccccCC--CCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccc
Q 002063 826 AKIAENSPKVSDYSCFAGTHGYIAPELAYTCK--VSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHE 903 (973)
Q Consensus 826 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 903 (973)
+................||+.|+|||++.+.. ++.++||||+|+++|||++|+.||... +.............
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~-----~~~~~~~~i~~~~~ 230 (305)
T 2wtk_C 156 AEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGD-----NIYKLFENIGKGSY 230 (305)
T ss_dssp CEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCS-----SHHHHHHHHHHCCC
T ss_pred ccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCc-----hHHHHHHHHhcCCC
Confidence 98765433333334456899999999987644 377999999999999999999999753 11122111111110
Q ss_pred cchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 904 NVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
.. .......+.+++.+||+.||.+||++.|++++-
T Consensus 231 --------~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~ 265 (305)
T 2wtk_C 231 --------AI----PGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHS 265 (305)
T ss_dssp --------CC----CSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSH
T ss_pred --------CC----CCccCHHHHHHHHHHccCChhhCCCHHHHhcCc
Confidence 00 112234678899999999999999999999763
No 203
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=4e-39 Score=355.19 Aligned_cols=268 Identities=26% Similarity=0.332 Sum_probs=204.9
Q ss_pred CcccCeecccCcEEEEEEEE----cCCCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEe--CCeeEE
Q 002063 678 LEEDNLIGSGGTGKVYRLDL----KKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLK--GGSSFL 748 (973)
Q Consensus 678 ~~~~~~lG~G~~g~Vy~a~~----~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~--~~~~~l 748 (973)
|++.+.||+|+||+||++.+ ..+++.||||++... ...+.+.+|++++++++||||+++++++.+ ....++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 48899999999999988765 346889999998764 335668899999999999999999999987 467899
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcc
Q 002063 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||+++|+|.+++... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++..
T Consensus 113 v~e~~~~~~L~~~l~~~------~~~~~~~~~i~~~l~~~l~~LH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~ 183 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRH------SIGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKA 183 (318)
T ss_dssp EECCCTTCBHHHHGGGS------CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred EEecccCCcHHHHHhhC------CCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEEcCCCCEEECCcccccc
Confidence 99999999999998643 3889999999999999999999 78999999999999999999999999999987
Q ss_pred ccCCCCc-ccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchh
Q 002063 829 AENSPKV-SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLK 907 (973)
Q Consensus 829 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
....... .......+|..|+|||++.+..++.++||||+|+++|||++|+.||............+..... ......+
T Consensus 184 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~ 262 (318)
T 3lxp_A 184 VPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQM-TVLRLTE 262 (318)
T ss_dssp CCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHH-HHHHHHH
T ss_pred ccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccch-hHHHHHH
Confidence 7544322 1223356788999999999989999999999999999999999999753210000000000000 0000011
Q ss_pred hccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002063 908 VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
.................+.+++.+||+.||.+||++.|+++.|+.+..
T Consensus 263 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~ 310 (318)
T 3lxp_A 263 LLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHE 310 (318)
T ss_dssp HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence 111111111223344678899999999999999999999999998754
No 204
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=9e-38 Score=339.52 Aligned_cols=249 Identities=18% Similarity=0.236 Sum_probs=201.3
Q ss_pred HHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeec----cccHHHHHHHHHHHHhc-CCCceeeEeEEEEeCCeeE
Q 002063 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK----GDGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSF 747 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~----~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~ 747 (973)
...++|++.+.||+|+||+||+|++..+++.||||++.. ......+.+|+..+.++ +||||+++++++.+++..+
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~ 87 (289)
T 1x8b_A 8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHML 87 (289)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEE
T ss_pred cccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEE
Confidence 445789999999999999999999998899999999875 23456678899999999 9999999999999999999
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCC------------
Q 002063 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDED------------ 815 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~------------ 815 (973)
+||||+++|+|.+++..... ....+++..+..++.|++.||+||| +++|+||||||+||+++.+
T Consensus 88 lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~ 163 (289)
T 1x8b_A 88 IQNEYCNGGSLADAISENYR-IMSYFKEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDE 163 (289)
T ss_dssp EEEECCTTCBHHHHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC--------------
T ss_pred EEEEecCCCcHHHHHHhhcc-cccCCCHHHHHHHHHHHHHHHHHHH---hCCEeecCCCHHHEEEcCCCCCccccccccc
Confidence 99999999999999986522 2245889999999999999999999 7899999999999999844
Q ss_pred -------CceEEecccCCccccCCCCcccccccCcccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccCC
Q 002063 816 -------YEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEEYGD 887 (973)
Q Consensus 816 -------~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~ell~g~~pf~~~~~~ 887 (973)
..+||+|||.+....... ...||+.|+|||++.+. .++.++|||||||++|||++|..|+...
T Consensus 164 ~~~~~~~~~~kl~Dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~--- 234 (289)
T 1x8b_A 164 DDWASNKVMFKIGDLGHVTRISSPQ------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG--- 234 (289)
T ss_dssp ------CCCEEECCCTTCEETTCSC------CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS---
T ss_pred ccccCCceEEEEcccccccccCCcc------ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch---
Confidence 479999999998765432 23589999999998766 5668999999999999999998876432
Q ss_pred CccHHHHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 888 GKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 888 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
.... .+ ..... +.. +......+.+++.+||+.||++||++.|++++-
T Consensus 235 -~~~~-~~--~~~~~--------~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~ 281 (289)
T 1x8b_A 235 -DQWH-EI--RQGRL--------PRI----PQVLSQEFTELLKVMIHPDPERRPSAMALVKHS 281 (289)
T ss_dssp -HHHH-HH--HTTCC--------CCC----SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCT
T ss_pred -hHHH-HH--HcCCC--------CCC----CcccCHHHHHHHHHHhCCCcccCCCHHHHhhCh
Confidence 1111 11 00000 011 112235688999999999999999999999764
No 205
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=2.7e-37 Score=346.82 Aligned_cols=254 Identities=23% Similarity=0.347 Sum_probs=205.3
Q ss_pred HHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc----------cHHHHHHHHHHHHhc-CCCceeeEeEEEE
Q 002063 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD----------GVKVFAAEMEILGKI-RHRNILKLYACLL 741 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~----------~~~~~~~E~~~l~~l-~hpniv~l~~~~~ 741 (973)
....+|++.+.||+|+||.||+|++..+|+.||||++.... ..+.+.+|+.+++++ +||||+++++++.
T Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 170 (365)
T 2y7j_A 91 EFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYE 170 (365)
T ss_dssp HHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEe
Confidence 34567999999999999999999999889999999886532 135678899999999 7999999999999
Q ss_pred eCCeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEe
Q 002063 742 KGGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIA 821 (973)
Q Consensus 742 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 821 (973)
..+..|+||||+++++|.+++... ..+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+
T Consensus 171 ~~~~~~lv~e~~~g~~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~~LH---~~gi~H~Dlkp~NIl~~~~~~ikl~ 242 (365)
T 2y7j_A 171 SSSFMFLVFDLMRKGELFDYLTEK-----VALSEKETRSIMRSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQIRLS 242 (365)
T ss_dssp BSSEEEEEECCCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEEC
T ss_pred eCCEEEEEEEeCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEE
Confidence 999999999999999999999753 35889999999999999999999 7799999999999999999999999
Q ss_pred cccCCccccCCCCcccccccCccccccccccccc------CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHH
Q 002063 822 DFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYT------CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWV 895 (973)
Q Consensus 822 Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~ 895 (973)
|||++........ .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.... .....
T Consensus 243 DfG~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~-----~~~~~ 314 (365)
T 2y7j_A 243 DFGFSCHLEPGEK---LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRR-----QILML 314 (365)
T ss_dssp CCTTCEECCTTCC---BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHH
T ss_pred ecCcccccCCCcc---cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCC-----HHHHH
Confidence 9999987654322 234578999999999863 358889999999999999999999996531 11111
Q ss_pred HHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 896 STHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
......... ............+.+++.+||+.||++||++.|++++-
T Consensus 315 ~~i~~~~~~--------~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp 361 (365)
T 2y7j_A 315 RMIMEGQYQ--------FSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHP 361 (365)
T ss_dssp HHHHHTCCC--------CCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSG
T ss_pred HHHHhCCCC--------CCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCc
Confidence 111111000 00001112245688999999999999999999999863
No 206
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=2.2e-37 Score=337.45 Aligned_cols=252 Identities=24% Similarity=0.316 Sum_probs=208.2
Q ss_pred HHHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCee
Q 002063 672 AEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSS 746 (973)
Q Consensus 672 ~~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 746 (973)
.....+|++.+.||+|+||+||+|++..+++.||+|++... ...+.+.+|+++++.++||||+++++++.+++..
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (294)
T 2rku_A 11 PRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFV 90 (294)
T ss_dssp TTTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred CCcccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEE
Confidence 34456899999999999999999999999999999988653 2456688999999999999999999999999999
Q ss_pred EEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCC
Q 002063 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVA 826 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~ 826 (973)
++||||+++++|.+++... ..+++..+..++.|+++|++||| +.+++||||||+||+++.++.+||+|||.+
T Consensus 91 ~lv~e~~~~~~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 162 (294)
T 2rku_A 91 FVVLELCRRRSLLELHKRR-----KALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLA 162 (294)
T ss_dssp EEEEECCTTCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEcCCCCEEEEeccCc
Confidence 9999999999999988753 35889999999999999999999 789999999999999999999999999999
Q ss_pred ccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccch
Q 002063 827 KIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVL 906 (973)
Q Consensus 827 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (973)
........ ......||+.|+|||++.+..++.++||||+|+++|+|++|+.||.... .............
T Consensus 163 ~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-----~~~~~~~~~~~~~--- 232 (294)
T 2rku_A 163 TKVEYDGE--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC-----LKETYLRIKKNEY--- 232 (294)
T ss_dssp EECCSTTC--CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHHHTTCC---
T ss_pred eecccCcc--ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHhhccC---
Confidence 87643322 2233568999999999998889999999999999999999999997541 1111111111110
Q ss_pred hhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 907 KVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
.. +......+.+++.+||+.||++||++.|++++-
T Consensus 233 -----~~----~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~ 267 (294)
T 2rku_A 233 -----SI----PKHINPVAASLIQKMLQTDPTARPTINELLNDE 267 (294)
T ss_dssp -----CC----CTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSH
T ss_pred -----CC----ccccCHHHHHHHHHHcccChhhCcCHHHHhhCh
Confidence 00 112234578899999999999999999999864
No 207
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-38 Score=355.54 Aligned_cols=256 Identities=29% Similarity=0.370 Sum_probs=194.7
Q ss_pred CCcccCeecccCcEEEEEEEEcCC---CceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEE-eCCeeEEE
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKN---AGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLL-KGGSSFLV 749 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~---~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~~~~~lv 749 (973)
.|++.+.||+|+||+||+|++..+ +..||||.+... ...+++.+|++++++++||||+++++++. .++..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 467788999999999999998643 246899988652 34567899999999999999999999875 45678999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccc
Q 002063 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
|||+++|+|.+++... ...+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 170 ~e~~~~g~L~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~ 242 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNE----THNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDM 242 (373)
T ss_dssp EECCTTCBHHHHHHCT----TCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC------
T ss_pred EECCCCCCHHHHHhhc----ccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCccchheEEECCCCCEEEeeccccccc
Confidence 9999999999999753 345788999999999999999999 789999999999999999999999999999866
Q ss_pred cCCCCc--ccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccch
Q 002063 830 ENSPKV--SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVL 906 (973)
Q Consensus 830 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (973)
...... .......+|+.|+|||++.+..++.++|||||||++|||++ |..||.... ..+....+.... .
T Consensus 243 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~--~~~~~~~~~~~~---~--- 314 (373)
T 3c1x_A 243 YDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN--TFDITVYLLQGR---R--- 314 (373)
T ss_dssp ---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSC--SSCHHHHHHTTC---C---
T ss_pred cccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCC--HHHHHHHHHcCC---C---
Confidence 433211 11223457889999999999999999999999999999999 677776542 222222221110 0
Q ss_pred hhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002063 907 KVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
. ..+......+.+++.+||+.||++||++.|++++|+++..
T Consensus 315 -~-------~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~ 355 (373)
T 3c1x_A 315 -L-------LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 355 (373)
T ss_dssp -C-------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -C-------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 0 0011233468899999999999999999999999998754
No 208
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=4.7e-38 Score=364.98 Aligned_cols=193 Identities=26% Similarity=0.408 Sum_probs=154.8
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeC-----Cee
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKG-----GSS 746 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-----~~~ 746 (973)
++|++.+.||+|+||+||+|++..+++.||||++... ...+++.+|++++++++||||+++++++... ...
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 5799999999999999999999999999999998652 3456788999999999999999999998543 568
Q ss_pred EEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCC
Q 002063 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVA 826 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~ 826 (973)
|+||||+ +|+|.+++.. ...+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||++
T Consensus 133 ~lv~e~~-~~~L~~~~~~-----~~~l~~~~~~~~~~qi~~aL~~LH---~~~iiHrDlKp~NILl~~~~~~kl~DFGla 203 (458)
T 3rp9_A 133 YVVLEIA-DSDFKKLFRT-----PVYLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLA 203 (458)
T ss_dssp EEEECCC-SEEHHHHHHS-----SCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEecc-ccchhhhccc-----CCCCCHHHHHHHHHHHHHHHHHHH---hCCcCCCCCChhhEEECCCCCEeecccccc
Confidence 9999998 5799998864 245899999999999999999999 789999999999999999999999999999
Q ss_pred ccccCCCCc-------------------------ccccccCccccccccccc-ccCCCCccchHHHHHHHHHHHHhC
Q 002063 827 KIAENSPKV-------------------------SDYSCFAGTHGYIAPELA-YTCKVSEKSDVFSFGVVLLELVTG 877 (973)
Q Consensus 827 ~~~~~~~~~-------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwslG~~l~ell~g 877 (973)
+........ ......+||+.|+|||++ .+..++.++||||+||++|||++|
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 204 RTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp BCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred hhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 876432211 122345789999999986 566799999999999999999994
No 209
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=1.7e-37 Score=340.13 Aligned_cols=251 Identities=24% Similarity=0.301 Sum_probs=203.9
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc--ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEc
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 752 (973)
.++|++.+.||+|+||+||+|++..+++.||||++... ...+.+.+|++++++++||||+++++++.+++..|+||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL 87 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence 45789999999999999999999988999999998763 2345688999999999999999999999999999999999
Q ss_pred cCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeee---cCCCceEEecccCCccc
Q 002063 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILL---DEDYEPKIADFGVAKIA 829 (973)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill---~~~~~~kl~Dfgl~~~~ 829 (973)
+++++|.+++... ..+++..+..++.|++.||+||| +.+++||||||+||++ +.++.+||+|||++...
T Consensus 88 ~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~ 159 (304)
T 2jam_A 88 VSGGELFDRILER-----GVYTEKDASLVIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKME 159 (304)
T ss_dssp CCSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCC
T ss_pred CCCccHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEecCCCCCCEEEccCCcceec
Confidence 9999999999754 25789999999999999999999 7899999999999999 77889999999998754
Q ss_pred cCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhc
Q 002063 830 ENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVL 909 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
... ......||+.|+|||++.+..++.++||||+|+++|||++|+.||.... ..............
T Consensus 160 ~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~~~~~~i~~~~~~----- 225 (304)
T 2jam_A 160 QNG----IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEET-----ESKLFEKIKEGYYE----- 225 (304)
T ss_dssp CCB----TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSC-----HHHHHHHHHHCCCC-----
T ss_pred CCC----ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHcCCCC-----
Confidence 322 2223468999999999999999999999999999999999999996531 11111111111100
Q ss_pred cccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 910 DCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
............+.+++.+|++.||++||++.|++++-
T Consensus 226 ---~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~ 263 (304)
T 2jam_A 226 ---FESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHP 263 (304)
T ss_dssp ---CCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSH
T ss_pred ---CCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCc
Confidence 00111122345688999999999999999999999853
No 210
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=1.1e-37 Score=341.53 Aligned_cols=250 Identities=28% Similarity=0.391 Sum_probs=207.1
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 751 (973)
.+.|++.+.||+|+||+||+|++..+++.||||++... ...+.+.+|+.++++++||||+++++++..+...++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 35689999999999999999999988999999998653 345788999999999999999999999999999999999
Q ss_pred ccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccC
Q 002063 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAEN 831 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~ 831 (973)
|+++++|.+++.. ..+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||.+.....
T Consensus 101 ~~~~~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~ 171 (303)
T 3a7i_A 101 YLGGGSALDLLEP------GPLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD 171 (303)
T ss_dssp CCTTEEHHHHHTT------SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECBT
T ss_pred eCCCCcHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChheEEECCCCCEEEeecccceecCc
Confidence 9999999998853 35889999999999999999999 78999999999999999999999999999987654
Q ss_pred CCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccc
Q 002063 832 SPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDC 911 (973)
Q Consensus 832 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (973)
... ......|++.|+|||++.+..++.++||||||+++|+|++|+.||.... ............. .
T Consensus 172 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~-------~ 237 (303)
T 3a7i_A 172 TQI--KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELH-----PMKVLFLIPKNNP-------P 237 (303)
T ss_dssp TBC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC-----HHHHHHHHHHSCC-------C
T ss_pred ccc--ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcC-----HHHHHHHhhcCCC-------C
Confidence 321 2234568999999999999999999999999999999999999996531 1111111111110 0
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 912 EVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 912 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
.. .......+.+++.+||+.||++||++.+++++..
T Consensus 238 ~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~ 273 (303)
T 3a7i_A 238 TL----EGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKF 273 (303)
T ss_dssp CC----CSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHH
T ss_pred CC----ccccCHHHHHHHHHHcCCChhhCcCHHHHhhChh
Confidence 11 1122345889999999999999999999998654
No 211
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=7.4e-38 Score=357.88 Aligned_cols=256 Identities=25% Similarity=0.311 Sum_probs=196.8
Q ss_pred HHHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc----------cHHHHHHHHHHHHhcCCCceeeEeEEEE
Q 002063 672 AEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD----------GVKVFAAEMEILGKIRHRNILKLYACLL 741 (973)
Q Consensus 672 ~~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~----------~~~~~~~E~~~l~~l~hpniv~l~~~~~ 741 (973)
....++|++.+.||+|+||+||+|.+..+++.||||++.... ....+.+|++++++++||||+++++++.
T Consensus 131 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~ 210 (419)
T 3i6u_A 131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD 210 (419)
T ss_dssp HHHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE
T ss_pred hhhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence 445678999999999999999999999999999999986531 1224789999999999999999999875
Q ss_pred eCCeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCC---ce
Q 002063 742 KGGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDY---EP 818 (973)
Q Consensus 742 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~---~~ 818 (973)
.+..|+||||+++|+|.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++ .+
T Consensus 211 -~~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~~~~ 281 (419)
T 3i6u_A 211 -AEDYYIVLELMEGGELFDKVVG-----NKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLI 281 (419)
T ss_dssp -SSEEEEEEECCTTCBGGGGTSS-----SCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSSSCCE
T ss_pred -cCceEEEEEcCCCCcHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCCCcceE
Confidence 4568999999999999887753 346899999999999999999999 77999999999999997544 59
Q ss_pred EEecccCCccccCCCCcccccccCccccccccccccc---CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHH
Q 002063 819 KIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYT---CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWV 895 (973)
Q Consensus 819 kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~ 895 (973)
||+|||+++...... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... ......+
T Consensus 282 kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~-~~~~~~i 357 (419)
T 3i6u_A 282 KITDFGHSKILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ-VSLKDQI 357 (419)
T ss_dssp EECCSSTTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSS-CCHHHHH
T ss_pred EEeecccceecCCCc---cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcch-HHHHHHH
Confidence 999999998764332 2234578999999999853 56788999999999999999999999754221 1222211
Q ss_pred HHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 896 STHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
..... .............+.+++.+||+.||++||++.|+++|-.
T Consensus 358 ~~~~~-----------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~ 402 (419)
T 3i6u_A 358 TSGKY-----------NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPW 402 (419)
T ss_dssp HTTCC-----------CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGG
T ss_pred hcCCC-----------CCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCCcc
Confidence 11100 0011112233556889999999999999999999998743
No 212
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=3.7e-37 Score=355.65 Aligned_cols=262 Identities=18% Similarity=0.192 Sum_probs=209.2
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHhcCC-CceeeEeEEEEeCCeeEEEEEcc
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRH-RNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h-pniv~l~~~~~~~~~~~lv~e~~ 753 (973)
.++|++.+.||+|+||+||+|++..+++.||||++......+++.+|+++++.++| +++..+..++..++..++||||+
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~ 85 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL 85 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC
Confidence 46899999999999999999999988999999998776666678899999999977 55666666677888999999999
Q ss_pred CCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeee---cCCCceEEecccCCcccc
Q 002063 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILL---DEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill---~~~~~~kl~Dfgl~~~~~ 830 (973)
+++|.+++... ...+++..+..++.||+.||+||| +.+|+||||||+|||+ +.++.+||+|||+++...
T Consensus 86 -g~sL~~ll~~~----~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 157 (483)
T 3sv0_A 86 -GPSLEDLFNFC----SRKLSLKTVLMLADQMINRVEFVH---SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYR 157 (483)
T ss_dssp -CCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred -CCCHHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCcceEEEecCCCCCeEEEEeCCcceecc
Confidence 99999999753 345899999999999999999999 7899999999999999 688999999999998775
Q ss_pred CCCCc-----ccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccc
Q 002063 831 NSPKV-----SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENV 905 (973)
Q Consensus 831 ~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 905 (973)
..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ....+........
T Consensus 158 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~--~~~~~~~i~~~~~-- 233 (483)
T 3sv0_A 158 DTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGT--KKQKYEKISEKKV-- 233 (483)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSS--HHHHHHHHHHHHH--
T ss_pred CCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchh--HHHHHHHHhhccc--
Confidence 44321 11224679999999999999999999999999999999999999998653221 1111111100000
Q ss_pred hhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcC
Q 002063 906 LKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADA 953 (973)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 953 (973)
. ............++.+++..||+.||++||++.+|++.|+++
T Consensus 234 ~-----~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l 276 (483)
T 3sv0_A 234 A-----TSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDL 276 (483)
T ss_dssp H-----SCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred c-----ccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 0 000001112345788999999999999999999999998875
No 213
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=5.3e-39 Score=351.94 Aligned_cols=267 Identities=26% Similarity=0.336 Sum_probs=191.1
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHh--cCCCceeeEeEEEEeCC----eeEEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGK--IRHRNILKLYACLLKGG----SSFLV 749 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~--l~hpniv~l~~~~~~~~----~~~lv 749 (973)
++|++.+.||+|+||+||+|++. ++.||||++... ....+.+|.+++.. ++||||+++++++..+. ..++|
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~-~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv 79 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSSR-EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 79 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT--TSCEEEEECC-T-THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEE
T ss_pred ceeeehhhccCCCCeEEEEEEEc--CcceEEEEeccc-chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEE
Confidence 57899999999999999999875 789999988654 34567788888887 79999999999998766 78999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcC-----CCCeEecCCCCCCeeecCCCceEEeccc
Q 002063 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDC-----SPPIIHRDIKSSNILLDEDYEPKIADFG 824 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~-----~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 824 (973)
|||+++|+|.+++... .+++..+..++.|++.|++|||.+. +.+|+||||||+||+++.++.+||+|||
T Consensus 80 ~e~~~~g~L~~~l~~~------~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg 153 (303)
T 3gxj_A 80 SDYHEHGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 153 (303)
T ss_dssp EECCTTCCHHHHHHHC------CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCC
T ss_pred EeccCCCCHHHHHhcc------CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecC
Confidence 9999999999999753 4677788899999999999999422 4689999999999999999999999999
Q ss_pred CCccccCCCCcc--cccccCcccccccccccccC------CCCccchHHHHHHHHHHHHhC----------CCCCCcccC
Q 002063 825 VAKIAENSPKVS--DYSCFAGTHGYIAPELAYTC------KVSEKSDVFSFGVVLLELVTG----------RKPVEEEYG 886 (973)
Q Consensus 825 l~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwslG~~l~ell~g----------~~pf~~~~~ 886 (973)
+++......... ......||+.|+|||++.+. .++.++|||||||++|||++| +.||.....
T Consensus 154 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~ 233 (303)
T 3gxj_A 154 LAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVP 233 (303)
T ss_dssp C-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC
T ss_pred cceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCC
Confidence 997665443321 12234699999999998766 344689999999999999999 666654322
Q ss_pred CCccHHHHHHHhhcccccchhhccccccC-hhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCCC
Q 002063 887 DGKDIVYWVSTHLNNHENVLKVLDCEVAS-ESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPCT 957 (973)
Q Consensus 887 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~ 957 (973)
................ ..+.... ....+....+.+++.+||+.||.+|||+.++++.|+++....
T Consensus 234 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~ 299 (303)
T 3gxj_A 234 SDPSVEEMRKVVCEQK------LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp -CCCCC-CHHHHTTSC------CCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC-
T ss_pred CCccHHHHHHHHHHhh------cCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhc
Confidence 1111111111111100 0111111 112255677999999999999999999999999999987654
No 214
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=6.3e-38 Score=338.99 Aligned_cols=255 Identities=27% Similarity=0.381 Sum_probs=205.9
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEcc
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
.++|++.+.||+|+||+||+|++.. ++.||||++... ...+.+.+|++++++++||||+++++++. ++..++||||+
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 89 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYM 89 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETT-TEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred HHhhhheeeecCCCCeEEEEEEEcC-CcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecC
Confidence 3578899999999999999999864 678999998763 35678899999999999999999999876 45689999999
Q ss_pred CCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCC
Q 002063 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~ 833 (973)
++++|.+++.... ...+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||.+.......
T Consensus 90 ~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 163 (279)
T 1qpc_A 90 ENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 163 (279)
T ss_dssp TTCBHHHHTTSHH---HHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSC
T ss_pred CCCCHHHHHhcCC---CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHhhEEEcCCCCEEECCCcccccccCcc
Confidence 9999999986431 125789999999999999999999 7899999999999999999999999999998765432
Q ss_pred CcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhhcccc
Q 002063 834 KVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCE 912 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
. .......++..|+|||++.+..++.++||||||+++|||++ |+.||.... .............
T Consensus 164 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~-----~~~~~~~~~~~~~--------- 228 (279)
T 1qpc_A 164 Y-TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT-----NPEVIQNLERGYR--------- 228 (279)
T ss_dssp E-ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCC-----HHHHHHHHHTTCC---------
T ss_pred c-ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccC-----HHHHHHHHhcccC---------
Confidence 2 22223456789999999998889999999999999999999 999996531 1111111111100
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002063 913 VASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 913 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
..........+.+++.+|++.||++||++.++++.|+++.
T Consensus 229 --~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 268 (279)
T 1qpc_A 229 --MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 268 (279)
T ss_dssp --CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --CCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHH
Confidence 0011123456889999999999999999999999998764
No 215
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=9.5e-39 Score=360.87 Aligned_cols=244 Identities=14% Similarity=0.141 Sum_probs=191.2
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeec-----cccHHHHHHHHH---HHHhcCCCceeeEe-------EE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK-----GDGVKVFAAEME---ILGKIRHRNILKLY-------AC 739 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~-----~~~~~~~~~E~~---~l~~l~hpniv~l~-------~~ 739 (973)
..+|++.+.||+|+||+||+|++..+++.||||++.. ....+.+.+|++ .+++++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 3578899999999999999999988899999999864 234577889994 55556899999998 66
Q ss_pred EEeCCe-----------------eEEEEEccCCCchHHHHHhhhcCC--CCCcCHHHHHHHHHHHHHHHhHhhhcCCCCe
Q 002063 740 LLKGGS-----------------SFLVLEYMPNGNLFQALHKRVKEG--KPELDWFRRYKIALGAAKGIAYLHHDCSPPI 800 (973)
Q Consensus 740 ~~~~~~-----------------~~lv~e~~~~gsL~~~l~~~~~~~--~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~i 800 (973)
+..++. .|+||||+ +|+|.+++....... ...+++..+..++.|++.||+||| +.+|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHH---HTTE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHH---hCCe
Confidence 665532 78999999 689999998642211 234556888899999999999999 7899
Q ss_pred EecCCCCCCeeecCCCceEEecccCCccccCCCCcccccccCcccccccccccccC-----------CCCccchHHHHHH
Q 002063 801 IHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTC-----------KVSEKSDVFSFGV 869 (973)
Q Consensus 801 vH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~DvwslG~ 869 (973)
+||||||+|||++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~ 301 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGL 301 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC-----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC-----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHH
Confidence 9999999999999999999999999985432 2233467 999999999887 8999999999999
Q ss_pred HHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 870 VLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 870 ~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
++|||++|+.||....... ....+... .......+.+++.+||+.||++||++.|++++
T Consensus 302 il~elltg~~Pf~~~~~~~---------------~~~~~~~~------~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 360 (377)
T 3byv_A 302 VIYWIWCADLPITKDAALG---------------GSEWIFRS------CKNIPQPVRALLEGFLRYPKEDRLLPLQAMET 360 (377)
T ss_dssp HHHHHHHSSCCC------C---------------CSGGGGSS------CCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTS
T ss_pred HHHHHHHCCCCCccccccc---------------chhhhhhh------ccCCCHHHHHHHHHHcCCCchhCCCHHHHhhC
Confidence 9999999999996542110 00111110 01223468889999999999999999999874
No 216
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=4.5e-38 Score=342.23 Aligned_cols=253 Identities=22% Similarity=0.284 Sum_probs=189.2
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc----cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD----GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 750 (973)
.++|++.+.||+|+||+||+|++..+++.||||++.... ..+.+.++...++.++||||+++++++.+++..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 467899999999999999999999899999999986532 2223444555578889999999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCC-CeEecCCCCCCeeecCCCceEEecccCCccc
Q 002063 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSP-PIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~-~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
||++ |+|.+++..... ....+++..+..++.|++.||+||| +. +++||||||+||+++.++.+||+|||++...
T Consensus 86 e~~~-~~l~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 160 (290)
T 3fme_A 86 ELMD-TSLDKFYKQVID-KGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL 160 (290)
T ss_dssp ECCS-EEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHH---HHSCCCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred ehhc-cchHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence 9996 599888876422 3456899999999999999999999 65 9999999999999999999999999999866
Q ss_pred cCCCCcccccccCccccccccccc----ccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccc
Q 002063 830 ENSPKVSDYSCFAGTHGYIAPELA----YTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENV 905 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 905 (973)
..... .....||+.|+|||++ .+..++.++||||+||++|||++|+.||..... .. ...........
T Consensus 161 ~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~-~~~~~~~~~~~-- 231 (290)
T 3fme_A 161 VDDVA---KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT---PF-QQLKQVVEEPS-- 231 (290)
T ss_dssp ------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSC---HH-HHHHHHHHSCC--
T ss_pred ccccc---ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCc---hH-HHHHHHhccCC--
Confidence 44322 2234689999999996 566789999999999999999999999974321 11 11111111111
Q ss_pred hhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 906 LKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
...........+.+++.+||+.||++|||+.|++++
T Consensus 232 --------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~h 267 (290)
T 3fme_A 232 --------PQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 267 (290)
T ss_dssp --------CCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred --------CCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHhC
Confidence 000111234568899999999999999999999884
No 217
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=2.3e-37 Score=362.25 Aligned_cols=251 Identities=27% Similarity=0.325 Sum_probs=201.6
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEE
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 749 (973)
..++|++.+.||+|+||+||+|++..++..||||++... .....+.+|+++++.++||||+++++++.++...|+|
T Consensus 35 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 114 (494)
T 3lij_A 35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLV 114 (494)
T ss_dssp HHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 345799999999999999999999999999999998752 3456788999999999999999999999999999999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecC---CCceEEecccCC
Q 002063 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE---DYEPKIADFGVA 826 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~---~~~~kl~Dfgl~ 826 (973)
|||+++|+|.+++... ..+++..+..++.|+++||+||| +.+|+||||||+||+++. ++.+||+|||++
T Consensus 115 ~e~~~~g~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a 186 (494)
T 3lij_A 115 MECYKGGELFDEIIHR-----MKFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLS 186 (494)
T ss_dssp EECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChhhEEEeCCCCCCcEEEEECCCC
Confidence 9999999999998754 35789999999999999999999 789999999999999976 455999999999
Q ss_pred ccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccch
Q 002063 827 KIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVL 906 (973)
Q Consensus 827 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (973)
....... ......||+.|+|||++. ..++.++||||+||++|+|++|+.||.... ..............
T Consensus 187 ~~~~~~~---~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~-----~~~~~~~i~~~~~~-- 255 (494)
T 3lij_A 187 AVFENQK---KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQT-----DQEILRKVEKGKYT-- 255 (494)
T ss_dssp EECBTTB---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHTCCC--
T ss_pred eECCCCc---cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhCCCC--
Confidence 8765432 223457999999999986 569999999999999999999999997541 11121111111110
Q ss_pred hhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 907 KVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
............+.+++.+||+.||.+|||+.|+++|
T Consensus 256 ------~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 256 ------FDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp ------CCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred ------CCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 0111122334568899999999999999999999876
No 218
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=5e-38 Score=375.41 Aligned_cols=259 Identities=23% Similarity=0.308 Sum_probs=202.6
Q ss_pred eecccCcEEEEEEEEc--CCCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccCCCc
Q 002063 683 LIGSGGTGKVYRLDLK--KNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPNGN 757 (973)
Q Consensus 683 ~lG~G~~g~Vy~a~~~--~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~gs 757 (973)
.||+|+||+||+|.+. .++..||||+++.. ...+.+.+|++++++++||||+++++++.. +..|+||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 7999999999999886 34667999998763 356789999999999999999999999876 56899999999999
Q ss_pred hHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCc-c
Q 002063 758 LFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKV-S 836 (973)
Q Consensus 758 L~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~-~ 836 (973)
|.+++... ...+++..+..++.|++.||+||| +++|+||||||+|||++.++.+||+|||+++........ .
T Consensus 422 L~~~l~~~----~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 494 (613)
T 2ozo_A 422 LHKFLVGK----REEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYT 494 (613)
T ss_dssp HHHHHTTC----TTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-------
T ss_pred HHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceee
Confidence 99999642 346899999999999999999999 789999999999999999999999999999876433221 1
Q ss_pred cccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhhccccccC
Q 002063 837 DYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVAS 915 (973)
Q Consensus 837 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (973)
......+++.|+|||++.+..++.++|||||||++|||++ |+.||.... ..+....+... . ..
T Consensus 495 ~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~--~~~~~~~i~~~----~----------~~ 558 (613)
T 2ozo_A 495 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK--GPEVMAFIEQG----K----------RM 558 (613)
T ss_dssp -------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--SHHHHHHHHTT----C----------CC
T ss_pred eccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCC--HHHHHHHHHcC----C----------CC
Confidence 1223346789999999999999999999999999999998 999997642 22222222111 0 01
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCCCCCCCCCCC
Q 002063 916 ESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPCTDKSPDNSS 965 (973)
Q Consensus 916 ~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~~~~~~s 965 (973)
..+..+...+.+++.+||+.||++||++.+|++.|+.+-.......+..|
T Consensus 559 ~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~~~~~~~s 608 (613)
T 2ozo_A 559 ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVEGGS 608 (613)
T ss_dssp CCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHSCSCCCSS
T ss_pred CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhccccCCcc
Confidence 11223445788999999999999999999999999986544443333333
No 219
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=4.2e-37 Score=343.10 Aligned_cols=271 Identities=25% Similarity=0.320 Sum_probs=213.6
Q ss_pred CHHHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHh--cCCCceeeEeEEEEeCC----
Q 002063 671 DAEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGK--IRHRNILKLYACLLKGG---- 744 (973)
Q Consensus 671 ~~~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~--l~hpniv~l~~~~~~~~---- 744 (973)
.....++|++.+.||+|+||+||+|++. ++.||||++... ....+.+|.++++. ++||||+++++++..+.
T Consensus 37 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~-~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~ 113 (342)
T 1b6c_B 37 QRTIARTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSSR-EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT 113 (342)
T ss_dssp HHHHHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEECGG-GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCC
T ss_pred cccccccEEEEeeecCCCCcEEEEEEEc--CccEEEEEeCch-hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccc
Confidence 3455678999999999999999999984 889999988654 34567889999887 78999999999998775
Q ss_pred eeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcC-----CCCeEecCCCCCCeeecCCCceE
Q 002063 745 SSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDC-----SPPIIHRDIKSSNILLDEDYEPK 819 (973)
Q Consensus 745 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~-----~~~ivH~Dlkp~Nill~~~~~~k 819 (973)
..++||||+++|+|.+++... .+++..+..++.|++.||+|||... +.+|+||||||+||+++.++.+|
T Consensus 114 ~~~lv~e~~~~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~k 187 (342)
T 1b6c_B 114 QLWLVSDYHEHGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCC 187 (342)
T ss_dssp CEEEEECCCTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEE
T ss_pred eeEEEEeecCCCcHHHHHhcc------CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEE
Confidence 789999999999999999753 4889999999999999999999321 36899999999999999999999
Q ss_pred EecccCCccccCCCCcc--cccccCcccccccccccccC------CCCccchHHHHHHHHHHHHhC----------CCCC
Q 002063 820 IADFGVAKIAENSPKVS--DYSCFAGTHGYIAPELAYTC------KVSEKSDVFSFGVVLLELVTG----------RKPV 881 (973)
Q Consensus 820 l~Dfgl~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwslG~~l~ell~g----------~~pf 881 (973)
|+|||++.......... ......||+.|+|||++.+. .++.++|||||||++|||++| +.||
T Consensus 188 L~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~ 267 (342)
T 1b6c_B 188 IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPY 267 (342)
T ss_dssp ECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTT
T ss_pred EEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCc
Confidence 99999998765443221 22345789999999998765 234689999999999999999 7888
Q ss_pred CcccCCCccHHHHHHHhhcccccchhhccccccC-hhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCC
Q 002063 882 EEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVAS-ESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPC 956 (973)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~ 956 (973)
............+......... .+.... ....+....+.+++.+||+.||++||++.+|+++|+++...
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~ 337 (342)
T 1b6c_B 268 YDLVPSDPSVEEMRKVVCEQKL------RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 337 (342)
T ss_dssp TTTSCSSCCHHHHHHHHTTSCC------CCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred cccCcCcccHHHHHHHHHHHHh------CCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHH
Confidence 7654333344443333221111 111111 11235667899999999999999999999999999987543
No 220
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=5e-38 Score=353.05 Aligned_cols=266 Identities=23% Similarity=0.340 Sum_probs=206.0
Q ss_pred HHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEE
Q 002063 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 749 (973)
...++|++.+.||+|+||+||+|++..+++.||+|++... ...+.+.+|++++++++||||+++++++..++..++|
T Consensus 30 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 109 (360)
T 3eqc_A 30 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 109 (360)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred cccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEE
Confidence 3456799999999999999999999999999999998763 3346788999999999999999999999999999999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccc
Q 002063 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
|||+++|+|.+++... ..+++..+..++.|++.||+|||+ ..+|+||||||+||+++.++.+||+|||++...
T Consensus 110 ~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~~i~~~l~~lh~--~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 182 (360)
T 3eqc_A 110 MEHMDGGSLDQVLKKA-----GRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL 182 (360)
T ss_dssp ECCCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHH--HHCCCCSCCSGGGEEECTTCCEEECCCCCCHHH
T ss_pred EECCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH--hCCEEcCCccHHHEEECCCCCEEEEECCCCccc
Confidence 9999999999999864 247899999999999999999993 238999999999999999999999999998755
Q ss_pred cCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhc---------
Q 002063 830 ENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLN--------- 900 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~--------- 900 (973)
... ......||+.|+|||++.+..++.++||||+||++|||++|+.||..... ............
T Consensus 183 ~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~ 256 (360)
T 3eqc_A 183 IDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDA--KELELMFGCQVEGDAAETPPR 256 (360)
T ss_dssp HHH----C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCH--HHHHHHHC-------------
T ss_pred ccc----cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHhcccccccCCCCCCC
Confidence 322 12235689999999999999999999999999999999999999975321 111000000000
Q ss_pred ----------------cccc----chhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 901 ----------------NHEN----VLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 901 ----------------~~~~----~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
.... ....................+.+++.+||+.||++|||+.|+++|-.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 327 (360)
T 3eqc_A 257 PRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAF 327 (360)
T ss_dssp -----------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHH
T ss_pred cccCCCcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChH
Confidence 0000 00000000000111123456889999999999999999999998643
No 221
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=6.5e-38 Score=342.42 Aligned_cols=258 Identities=29% Similarity=0.375 Sum_probs=201.0
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCC---CceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEE-eCCeeE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKN---AGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLL-KGGSSF 747 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~---~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~~~~~ 747 (973)
..+|++.+.||+|+||+||+|++..+ ...||||.+... ...+.+.+|++++++++||||+++++++. .++..+
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 103 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence 34688899999999999999997543 345899987653 34567889999999999999999999864 566789
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCc
Q 002063 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
+||||+++|+|.+++... ...+++..+..++.|++.||+||| +++++||||||+||+++.++.+||+|||+++
T Consensus 104 ~v~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~ql~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~ 176 (298)
T 3f66_A 104 VVLPYMKHGDLRNFIRNE----THNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLAR 176 (298)
T ss_dssp EEEECCTTCBHHHHHHCT----TCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSCGGGC
T ss_pred EEEeCCCCCCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEECCCCCEEECcccccc
Confidence 999999999999999753 345789999999999999999999 7899999999999999999999999999998
Q ss_pred cccCCCC--cccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhccccc
Q 002063 828 IAENSPK--VSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHEN 904 (973)
Q Consensus 828 ~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 904 (973)
....... ........+|+.|+|||++.+..++.++||||+|+++|||++ |..||... ...+...........
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~--- 251 (298)
T 3f66_A 177 DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV--NTFDITVYLLQGRRL--- 251 (298)
T ss_dssp CCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTS--CTTTHHHHHHTTCCC---
T ss_pred cccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccC--CHHHHHHHHhcCCCC---
Confidence 6643321 112233467889999999999999999999999999999999 55566443 112222211111000
Q ss_pred chhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002063 905 VLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
..+......+.+++.+||+.||++||++.|+++.|+++..
T Consensus 252 -----------~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 291 (298)
T 3f66_A 252 -----------LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 291 (298)
T ss_dssp -----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -----------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 0011123468899999999999999999999999998754
No 222
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=2.5e-37 Score=354.46 Aligned_cols=198 Identities=25% Similarity=0.315 Sum_probs=174.1
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc-cHHHHHHHHHHHHhc------CCCceeeEeEEEEeCCeeE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-GVKVFAAEMEILGKI------RHRNILKLYACLLKGGSSF 747 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l------~hpniv~l~~~~~~~~~~~ 747 (973)
..+|++.+.||+|+||+||+|++..+++.||||++.... ....+.+|+++++.+ .|+||+++++++......+
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~ 175 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHIC 175 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEE
Confidence 457999999999999999999999999999999987643 345677899998887 5779999999999999999
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCc--eEEecccC
Q 002063 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYE--PKIADFGV 825 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~--~kl~Dfgl 825 (973)
+||||++ ++|.+++... ....+++..+..++.|++.||+||| +.+|+||||||+|||++.++. +||+|||+
T Consensus 176 lv~e~~~-~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~ 248 (429)
T 3kvw_A 176 MTFELLS-MNLYELIKKN---KFQGFSLPLVRKFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGS 248 (429)
T ss_dssp EEECCCC-CBHHHHHHHT---TTCCCCHHHHHHHHHHHHHHHHHHH---HHTEECSCCSGGGEEESSTTSCCEEECCCTT
T ss_pred EEEeccC-CCHHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEccCCCcceEEeeccc
Confidence 9999995 6999999864 2345899999999999999999999 679999999999999999887 99999999
Q ss_pred CccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcc
Q 002063 826 AKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEE 884 (973)
Q Consensus 826 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~ 884 (973)
++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 249 a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 249 SCYEHQR-----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp CEETTCC-----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ceecCCc-----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 9755432 22356899999999999999999999999999999999999999754
No 223
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=3.5e-37 Score=361.63 Aligned_cols=252 Identities=27% Similarity=0.311 Sum_probs=204.3
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc---------------ccHHHHHHHHHHHHhcCCCceeeEeE
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---------------DGVKVFAAEMEILGKIRHRNILKLYA 738 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~---------------~~~~~~~~E~~~l~~l~hpniv~l~~ 738 (973)
..++|++.+.||+|+||+||+|++..+++.||||++... ...+.+.+|++++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 456899999999999999999999999999999998652 23467889999999999999999999
Q ss_pred EEEeCCeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCC--
Q 002063 739 CLLKGGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDY-- 816 (973)
Q Consensus 739 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~-- 816 (973)
++.++...|+||||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~ 185 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINR-----HKFDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSL 185 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESSTTCC
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCcHHHEEEecCCCC
Confidence 999999999999999999999999764 35889999999999999999999 78999999999999998876
Q ss_pred -ceEEecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHH
Q 002063 817 -EPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWV 895 (973)
Q Consensus 817 -~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~ 895 (973)
.+||+|||++....... ......||+.|+|||++. ..++.++||||+||++|+|++|+.||.... .....
T Consensus 186 ~~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~-----~~~~~ 256 (504)
T 3q5i_A 186 LNIKIVDFGLSSFFSKDY---KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQN-----DQDII 256 (504)
T ss_dssp SSEEECCCTTCEECCTTS---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHH
T ss_pred ccEEEEECCCCEEcCCCC---ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCC-----HHHHH
Confidence 69999999998765432 223456999999999986 468999999999999999999999997541 11121
Q ss_pred HHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 896 STHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
......... ............+.+++.+|+++||.+|||+.|++++-
T Consensus 257 ~~i~~~~~~--------~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~ 303 (504)
T 3q5i_A 257 KKVEKGKYY--------FDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSR 303 (504)
T ss_dssp HHHHHCCCC--------CCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred HHHHcCCCC--------CCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCH
Confidence 111111100 00011122345688999999999999999999999864
No 224
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=2.3e-37 Score=343.65 Aligned_cols=251 Identities=24% Similarity=0.322 Sum_probs=207.8
Q ss_pred HHHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCee
Q 002063 672 AEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSS 746 (973)
Q Consensus 672 ~~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 746 (973)
.....+|++.+.||+|+||+||+|++..+++.||+|++... ...+.+.+|++++++++||||+++++++.+++..
T Consensus 37 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 116 (335)
T 2owb_A 37 PRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFV 116 (335)
T ss_dssp TTTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred cccCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeE
Confidence 34456889999999999999999999999999999998653 3456788999999999999999999999999999
Q ss_pred EEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCC
Q 002063 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVA 826 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~ 826 (973)
|+||||+++++|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 117 ~lv~e~~~~~~L~~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~ 188 (335)
T 2owb_A 117 FVVLELCRRRSLLELHKRR-----KALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLA 188 (335)
T ss_dssp EEEECCCTTCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEecCCCCCHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCEecCCCchhEEEcCCCCEEEeeccCc
Confidence 9999999999999998753 35889999999999999999999 789999999999999999999999999999
Q ss_pred ccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccch
Q 002063 827 KIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVL 906 (973)
Q Consensus 827 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (973)
........ ......||..|+|||++.+..++.++||||||+++|||++|+.||.... ..............
T Consensus 189 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~~~~~~~~~~~~~-- 259 (335)
T 2owb_A 189 TKVEYDGE--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC-----LKETYLRIKKNEYS-- 259 (335)
T ss_dssp EECCSTTC--CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHHHHTCCC--
T ss_pred eecccCcc--cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCC-----HHHHHHHHhcCCCC--
Confidence 87643322 2233568999999999999899999999999999999999999996531 11111111111100
Q ss_pred hhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 907 KVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
. .......+.+++.+||+.||++||++.|++++
T Consensus 260 ------~----~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 260 ------I----PKHINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp ------C----CTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ------C----CccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0 11123457889999999999999999999985
No 225
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.4e-37 Score=352.15 Aligned_cols=265 Identities=21% Similarity=0.244 Sum_probs=199.1
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHhcCCCceeeEeEEEEeC----------
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYACLLKG---------- 743 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~---------- 743 (973)
...+|++.+.||+|+||+||+|++..+++.||||++..... ...+|+++++.++||||+++++++...
T Consensus 5 ~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~--~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~ 82 (383)
T 3eb0_A 5 SSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR--YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQP 82 (383)
T ss_dssp -CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT--SCCHHHHHHTTCCCTTBCCEEEEEEEC----------
T ss_pred ccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc--hHHHHHHHHHHcCCCCccchhheeeecCccccccccc
Confidence 34689999999999999999999999999999998865432 235799999999999999999998442
Q ss_pred ----------------------------CeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhc
Q 002063 744 ----------------------------GSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHD 795 (973)
Q Consensus 744 ----------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~ 795 (973)
...++||||++ |+|.+.+..... ....+++..+..++.|+++||+|||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH-- 158 (383)
T 3eb0_A 83 PDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIR-SGRSIPMNLISIYIYQLFRAVGFIH-- 158 (383)
T ss_dssp ---------------------------CCEEEEEECCCS-EEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHH--
T ss_pred ccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHH--
Confidence 34789999997 688888876432 3456899999999999999999999
Q ss_pred CCCCeEecCCCCCCeeec-CCCceEEecccCCccccCCCCcccccccCcccccccccccccC-CCCccchHHHHHHHHHH
Q 002063 796 CSPPIIHRDIKSSNILLD-EDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLE 873 (973)
Q Consensus 796 ~~~~ivH~Dlkp~Nill~-~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~e 873 (973)
+.+|+||||||+||+++ .++.+||+|||+++....... .....||+.|+|||++.+. .++.++||||+||++||
T Consensus 159 -~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~e 234 (383)
T 3eb0_A 159 -SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP---SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGE 234 (383)
T ss_dssp -TTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC---CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHH
T ss_pred -HCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC---CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHH
Confidence 88999999999999998 688999999999986644322 2235689999999998765 48999999999999999
Q ss_pred HHhCCCCCCcccCCCccHHHHHHHhh--------cccccchhhccccccC-----hhhHHHHHHHHHHHHHhcCCCCCCC
Q 002063 874 LVTGRKPVEEEYGDGKDIVYWVSTHL--------NNHENVLKVLDCEVAS-----ESIKEDMIKLLKIAVVCTTKLPNLR 940 (973)
Q Consensus 874 ll~g~~pf~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~l~~~cl~~dP~~R 940 (973)
|++|+.||..... .......+...- .......+...+.... ..+......+.+++.+||++||.+|
T Consensus 235 ll~g~~pf~~~~~-~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 313 (383)
T 3eb0_A 235 LILGKPLFSGETS-IDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLR 313 (383)
T ss_dssp HHHSSCSSCCSSH-HHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGS
T ss_pred HHhCCCCCCCCCh-HHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhC
Confidence 9999999975421 111111111000 0000000000011000 1112234568899999999999999
Q ss_pred CCHHHHHHH
Q 002063 941 PPMREVVKM 949 (973)
Q Consensus 941 pt~~evl~~ 949 (973)
||+.|+++|
T Consensus 314 ~t~~e~l~h 322 (383)
T 3eb0_A 314 INPYEAMAH 322 (383)
T ss_dssp CCHHHHHTS
T ss_pred CCHHHHhcC
Confidence 999999875
No 226
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=5e-37 Score=345.82 Aligned_cols=259 Identities=27% Similarity=0.304 Sum_probs=195.6
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCC-----
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGG----- 744 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~----- 744 (973)
..++|++.+.||+|+||+||+|++..+++.||||++... ...+.+.+|+++++.++||||+++++++...+
T Consensus 23 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 102 (371)
T 2xrw_A 23 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 102 (371)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTC
T ss_pred hhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccc
Confidence 356899999999999999999999999999999998752 33456789999999999999999999997654
Q ss_pred -eeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecc
Q 002063 745 -SSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADF 823 (973)
Q Consensus 745 -~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 823 (973)
..|+||||++ |+|.+++.. .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+||
T Consensus 103 ~~~~lv~e~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Df 171 (371)
T 2xrw_A 103 QDVYIVMELMD-ANLCQVIQM-------ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDF 171 (371)
T ss_dssp CEEEEEEECCS-EEHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCC
T ss_pred cceEEEEEcCC-CCHHHHHhh-------ccCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEEEe
Confidence 7899999996 578888752 3788999999999999999999 789999999999999999999999999
Q ss_pred cCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHh-----
Q 002063 824 GVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTH----- 898 (973)
Q Consensus 824 gl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~----- 898 (973)
|+++...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||..... ...+....
T Consensus 172 g~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~----~~~~~~i~~~~~~ 244 (371)
T 2xrw_A 172 GLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH----IDQWNKVIEQLGT 244 (371)
T ss_dssp CC-------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHHHHHC-CCC
T ss_pred eccccccccc---ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHHHhCC
Confidence 9998654321 22335789999999999999999999999999999999999999975311 11111000
Q ss_pred ----------------hcccccc-----hhhccc---cccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 899 ----------------LNNHENV-----LKVLDC---EVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 899 ----------------~~~~~~~-----~~~~~~---~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
....... ...... .............+.+++.+||+.||.+|||+.|+++|-
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp 320 (371)
T 2xrw_A 245 PCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 320 (371)
T ss_dssp CCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSH
T ss_pred CCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCc
Confidence 0000000 000000 001112234467789999999999999999999999875
No 227
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=7.4e-38 Score=348.44 Aligned_cols=255 Identities=23% Similarity=0.313 Sum_probs=187.9
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc--ccHHHHHHHHHHHHhcC-CCceeeEeEEEEe--------CC
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG--DGVKVFAAEMEILGKIR-HRNILKLYACLLK--------GG 744 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~--------~~ 744 (973)
.+|++.+.||+|+||+||+|++..+++.||||++... ...+.+.+|+.+++++. ||||+++++++.. ..
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~ 107 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQA 107 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSE
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCc
Confidence 4789999999999999999999988999999988653 34566889999999996 9999999999843 34
Q ss_pred eeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCC--eEecCCCCCCeeecCCCceEEec
Q 002063 745 SSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPP--IIHRDIKSSNILLDEDYEPKIAD 822 (973)
Q Consensus 745 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~--ivH~Dlkp~Nill~~~~~~kl~D 822 (973)
..++||||++ |+|.+++.... ....+++..+..++.|++.||+||| +.+ |+||||||+||+++.++.+||+|
T Consensus 108 ~~~lv~e~~~-g~L~~~l~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH---~~~~~ivH~Dikp~NIl~~~~~~~kl~D 181 (337)
T 3ll6_A 108 EFLLLTELCK-GQLVEFLKKME--SRGPLSCDTVLKIFYQTCRAVQHMH---RQKPPIIHRDLKVENLLLSNQGTIKLCD 181 (337)
T ss_dssp EEEEEEECCS-EEHHHHHHHHH--TTCSCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCCCCCGGGCEECTTSCEEBCC
T ss_pred eEEEEEEecC-CCHHHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCEEEccCCcccEEECCCCCEEEec
Confidence 5799999995 79999997642 2346899999999999999999999 677 99999999999999999999999
Q ss_pred ccCCccccCCCCcc----------cccccCccccccccccc---ccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCc
Q 002063 823 FGVAKIAENSPKVS----------DYSCFAGTHGYIAPELA---YTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGK 889 (973)
Q Consensus 823 fgl~~~~~~~~~~~----------~~~~~~gt~~y~aPE~~---~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~ 889 (973)
||+++......... ......||+.|+|||++ .+..++.++|||||||++|||++|+.||.....
T Consensus 182 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~--- 258 (337)
T 3ll6_A 182 FGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAK--- 258 (337)
T ss_dssp CTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--------
T ss_pred CccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhH---
Confidence 99998765432211 11134589999999998 566789999999999999999999999965311
Q ss_pred cHHHHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCC
Q 002063 890 DIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADP 955 (973)
Q Consensus 890 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 955 (973)
......... ..........+.+++.+||+.||.+||++.|++++|+++..
T Consensus 259 --~~~~~~~~~--------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~ 308 (337)
T 3ll6_A 259 --LRIVNGKYS--------------IPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAA 308 (337)
T ss_dssp ---------CC--------------CCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --HHhhcCccc--------------CCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 011110000 00001112247789999999999999999999999998754
No 228
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=3.6e-37 Score=353.89 Aligned_cols=198 Identities=27% Similarity=0.376 Sum_probs=168.1
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeC-----Cee
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKG-----GSS 746 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-----~~~ 746 (973)
++|++.+.||+|+||+||+|++..+++.||||++... ...+++.+|++++++++||||+++++++... ...
T Consensus 26 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 105 (432)
T 3n9x_A 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDEL 105 (432)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeE
Confidence 5799999999999999999999999999999998652 3456788999999999999999999999766 578
Q ss_pred EEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCC
Q 002063 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVA 826 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~ 826 (973)
|+||||++ |+|.+++.. ...+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 106 ~lv~e~~~-~~L~~~~~~-----~~~l~~~~~~~i~~qil~aL~~LH---~~givHrDlkp~NILl~~~~~~kL~DFGla 176 (432)
T 3n9x_A 106 YIVLEIAD-SDLKKLFKT-----PIFLTEEHIKTILYNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLA 176 (432)
T ss_dssp EEEEECCS-EEHHHHHHS-----SCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEecCC-cCHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCHHHeEECCCCCEEEccCCCc
Confidence 99999995 699999874 245899999999999999999999 789999999999999999999999999999
Q ss_pred ccccCCCCc--------------------ccccccCccccccccccc-ccCCCCccchHHHHHHHHHHHHhCCCCCC
Q 002063 827 KIAENSPKV--------------------SDYSCFAGTHGYIAPELA-YTCKVSEKSDVFSFGVVLLELVTGRKPVE 882 (973)
Q Consensus 827 ~~~~~~~~~--------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwslG~~l~ell~g~~pf~ 882 (973)
+........ ......+||+.|+|||++ .+..++.++||||+||++|||++|..||.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 177 RTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp EEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 876543211 122456799999999986 56679999999999999999999766664
No 229
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=5.2e-38 Score=370.07 Aligned_cols=259 Identities=29% Similarity=0.412 Sum_probs=208.9
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEcc
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 753 (973)
.++|++.+.||+|+||+||+|++.. +..||||++... ...+.+.+|++++++++||||+++++++.+ +..|+||||+
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~ 343 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 343 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred hhhhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehh
Confidence 4567889999999999999999986 567999998763 356789999999999999999999998865 6789999999
Q ss_pred CCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCC
Q 002063 754 PNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSP 833 (973)
Q Consensus 754 ~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~ 833 (973)
++|+|.+++.... ...+++..+..++.||++||+||| +++|+||||||+|||++.++.+||+|||+++......
T Consensus 344 ~~gsL~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 417 (535)
T 2h8h_A 344 SKGSLLDFLKGET---GKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 417 (535)
T ss_dssp TTEEHHHHHSHHH---HTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHH
T ss_pred cCCcHHHHHhhcC---CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCc
Confidence 9999999997531 234789999999999999999999 7899999999999999999999999999998654321
Q ss_pred CcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhhcccc
Q 002063 834 KVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCE 912 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (973)
........++..|+|||++.+..++.++|||||||++|||++ |+.||.... .......+. ...
T Consensus 418 -~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~--~~~~~~~i~----~~~--------- 481 (535)
T 2h8h_A 418 -YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV--NREVLDQVE----RGY--------- 481 (535)
T ss_dssp -HHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCC--HHHHHHHHH----TTC---------
T ss_pred -eecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHH----cCC---------
Confidence 111223456789999999998999999999999999999999 999996541 111111111 110
Q ss_pred ccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCCCC
Q 002063 913 VASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPCTD 958 (973)
Q Consensus 913 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~~ 958 (973)
.......+...+.+++.+||+.||++||++.+|++.|+++.....
T Consensus 482 -~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~ 526 (535)
T 2h8h_A 482 -RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 526 (535)
T ss_dssp -CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCCS
T ss_pred -CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhccC
Confidence 001112334568899999999999999999999999999865443
No 230
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.1e-37 Score=346.93 Aligned_cols=268 Identities=24% Similarity=0.305 Sum_probs=197.9
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHH--HHhcCCCceeeEeEEEEe-----CCee
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEI--LGKIRHRNILKLYACLLK-----GGSS 746 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~--l~~l~hpniv~l~~~~~~-----~~~~ 746 (973)
..++|++.+.||+|+||+||+|+.. ++.||||++.... ...+..|.++ +..++||||+++++++.. ....
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~-~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 87 (336)
T 3g2f_A 11 DLDNLKLLELIGRGRYGAVYKGSLD--ERPVAVKVFSFAN-RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY 87 (336)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEET--TEEEEEEEEEGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred ChHHhheeeecccCCCeEEEEEEEC--CeEEEEEEeeccc-hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence 3568999999999999999999874 7899999986543 3344455555 445899999999986643 2356
Q ss_pred EEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCC---------CeEecCCCCCCeeecCCCc
Q 002063 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSP---------PIIHRDIKSSNILLDEDYE 817 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~---------~ivH~Dlkp~Nill~~~~~ 817 (973)
++||||+++|+|.+++... ..++..+..++.|+++||+||| +. +|+||||||+||+++.++.
T Consensus 88 ~lv~e~~~~g~L~~~l~~~------~~~~~~~~~i~~qi~~~L~~LH---~~~~~~~~~~~~ivH~Dikp~Nill~~~~~ 158 (336)
T 3g2f_A 88 LLVMEYYPNGSLXKYLSLH------TSDWVSSCRLAHSVTRGLAYLH---TELPRGDHYKPAISHRDLNSRNVLVKNDGT 158 (336)
T ss_dssp EEEECCCTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHH---CCBCCGGGCBCCEECSSCSGGGEEECTTSC
T ss_pred EEEEecCCCCcHHHHHhhc------ccchhHHHHHHHHHHHHHHHHH---hhhccccccccceeecccccceEEEcCCCc
Confidence 8999999999999999754 3488899999999999999999 66 9999999999999999999
Q ss_pred eEEecccCCccccCCCC------cccccccCccccccccccccc-------CCCCccchHHHHHHHHHHHHhCCCCCCcc
Q 002063 818 PKIADFGVAKIAENSPK------VSDYSCFAGTHGYIAPELAYT-------CKVSEKSDVFSFGVVLLELVTGRKPVEEE 884 (973)
Q Consensus 818 ~kl~Dfgl~~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwslG~~l~ell~g~~pf~~~ 884 (973)
+||+|||+++....... ........||+.|+|||++.+ ..++.++|||||||++|||++|..||...
T Consensus 159 ~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~ 238 (336)
T 3g2f_A 159 CVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPG 238 (336)
T ss_dssp EEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTT
T ss_pred EEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCc
Confidence 99999999987643321 112224569999999999876 45677899999999999999998777433
Q ss_pred cCCCc-------------cHHHHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 885 YGDGK-------------DIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 885 ~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
..... ....+ ............+ .. ...........+.+++.+||+.||++|||+.|+++.|+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~--~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~ 314 (336)
T 3g2f_A 239 ESVPEYQMAFQTEVGNHPTFEDM-QVLVSREKQRPKF-PE--AWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMA 314 (336)
T ss_dssp SCCCCCCCTTHHHHCSSCCHHHH-HHHHTTSCCCCCC-CT--TCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred cchhHHHHhhhcccCCCchHHHH-HhhhcccccCCCC-Cc--ccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHH
Confidence 21110 00111 0000000000000 00 00112345667999999999999999999999999999
Q ss_pred cCCCCC
Q 002063 952 DADPCT 957 (973)
Q Consensus 952 ~~~~~~ 957 (973)
++....
T Consensus 315 ~ll~~~ 320 (336)
T 3g2f_A 315 ELMMIW 320 (336)
T ss_dssp HHHHCC
T ss_pred HHHHHH
Confidence 876444
No 231
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.3e-38 Score=350.54 Aligned_cols=263 Identities=28% Similarity=0.374 Sum_probs=206.9
Q ss_pred hcCCcccCeecccCcEEEEEEEE----cCCCceEEEEEeecc--ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCC--ee
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDL----KKNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRHRNILKLYACLLKGG--SS 746 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~----~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~--~~ 746 (973)
..+|++.+.||+|+||+||+|+. ..+++.||||++... ...+.+.+|++++++++||||+++++++...+ ..
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 35688999999999999999994 567899999998663 34567899999999999999999999886543 78
Q ss_pred EEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCC
Q 002063 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVA 826 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~ 826 (973)
++||||+++|+|.+++... ...+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 120 ~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kL~Dfg~~ 192 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKH----KERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLT 192 (326)
T ss_dssp EEEECCCTTCBHHHHHHHS----TTSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTC
T ss_pred EEEEECCCCCCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEEcCCCcEEEecCcch
Confidence 9999999999999999864 335889999999999999999999 789999999999999999999999999999
Q ss_pred ccccCCCCccc-ccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccC-------CC---ccHHHHH
Q 002063 827 KIAENSPKVSD-YSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYG-------DG---KDIVYWV 895 (973)
Q Consensus 827 ~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~-------~~---~~~~~~~ 895 (973)
........... .....++..|+|||++.+..++.++||||||+++|||++|..||..... .. ......+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (326)
T 2w1i_A 193 KVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 272 (326)
T ss_dssp EECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHH
T ss_pred hhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHH
Confidence 87754432211 2234577889999999988899999999999999999999999864310 00 0000001
Q ss_pred HHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCC
Q 002063 896 STHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADAD 954 (973)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 954 (973)
..... .......+......+.+++.+||+.||++||++.|+++.|+++.
T Consensus 273 ~~~~~----------~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~ 321 (326)
T 2w1i_A 273 IELLK----------NNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 321 (326)
T ss_dssp HHHHH----------TTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHhh----------cCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 11111 10011112233456889999999999999999999999998763
No 232
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=3e-37 Score=342.45 Aligned_cols=261 Identities=21% Similarity=0.229 Sum_probs=203.1
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHhcC-CCceeeEeEEEEe--CCeeEEEEE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIR-HRNILKLYACLLK--GGSSFLVLE 751 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~--~~~~~lv~e 751 (973)
.++|++.+.||+|+||+||+|++..+++.||||++.. ...+.+.+|++++++++ ||||+++++++.. ....++|||
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~-~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e 113 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP-VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFE 113 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS-CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecc-cchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEe
Confidence 4689999999999999999999999999999998864 34567899999999997 9999999999987 667899999
Q ss_pred ccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCC-ceEEecccCCcccc
Q 002063 752 YMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDY-EPKIADFGVAKIAE 830 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~-~~kl~Dfgl~~~~~ 830 (973)
|+++++|.+++. .+++..+..++.|++.||+||| +.+|+||||||+||+++.++ .+||+|||+++...
T Consensus 114 ~~~~~~l~~~~~--------~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~ 182 (330)
T 3nsz_A 114 HVNNTDFKQLYQ--------TLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 182 (330)
T ss_dssp CCCCCCHHHHGG--------GCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred ccCchhHHHHHH--------hCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcC
Confidence 999999988874 2788899999999999999999 78999999999999999777 89999999998665
Q ss_pred CCCCcccccccCccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhc---------
Q 002063 831 NSPKVSDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLN--------- 900 (973)
Q Consensus 831 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~--------- 900 (973)
.... .....|+..|+|||++.+ ..++.++||||+||++|||++|+.||...................
T Consensus 183 ~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 259 (330)
T 3nsz_A 183 PGQE---YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDK 259 (330)
T ss_dssp TTCC---CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred CCCc---cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHH
Confidence 4322 233568999999999877 678999999999999999999999995432221111111110000
Q ss_pred ---c-cccchhhc--------cccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 901 ---N-HENVLKVL--------DCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 901 ---~-~~~~~~~~--------~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
. ........ ...............+.+++.+||++||++|||+.|+++|-
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp 321 (330)
T 3nsz_A 260 YNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 321 (330)
T ss_dssp TTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSG
T ss_pred hccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCc
Confidence 0 00000000 00001111122356788999999999999999999999863
No 233
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.4e-37 Score=344.27 Aligned_cols=257 Identities=20% Similarity=0.210 Sum_probs=204.0
Q ss_pred HHhcCCccc-CeecccCcEEEEEEEEcCCCceEEEEEeec----cccHHHHHHHHHHHHhc-CCCceeeEeEEEEeCCee
Q 002063 673 EQICNLEED-NLIGSGGTGKVYRLDLKKNAGTVAVKQLWK----GDGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSS 746 (973)
Q Consensus 673 ~~~~~~~~~-~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~----~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~ 746 (973)
...++|.+. +.||+|+||+||+|++..+++.||||++.. ......+.+|+.+++++ +||||+++++++..++..
T Consensus 25 ~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~ 104 (327)
T 3lm5_A 25 NFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEI 104 (327)
T ss_dssp HHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred hhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeE
Confidence 444567776 889999999999999999999999998875 23456789999999999 569999999999999999
Q ss_pred EEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecC---CCceEEecc
Q 002063 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE---DYEPKIADF 823 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~---~~~~kl~Df 823 (973)
++||||+++|+|.+++... ....+++..+..++.|++.||+||| +.+|+||||||+||+++. ++.+||+||
T Consensus 105 ~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~i~~ql~~~L~~LH---~~givH~Dikp~NIl~~~~~~~~~~kL~Df 178 (327)
T 3lm5_A 105 ILILEYAAGGEIFSLCLPE---LAEMVSENDVIRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDF 178 (327)
T ss_dssp EEEEECCTTEEGGGGGSSC---C-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESCBTTBCCEEECCG
T ss_pred EEEEEecCCCcHHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCChHHEEEecCCCCCcEEEeeC
Confidence 9999999999999887532 3356899999999999999999999 789999999999999987 789999999
Q ss_pred cCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccc
Q 002063 824 GVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHE 903 (973)
Q Consensus 824 gl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 903 (973)
|+++....... .....||+.|+|||++.+..++.++||||+||++|||++|+.||.... ............
T Consensus 179 g~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-----~~~~~~~i~~~~- 249 (327)
T 3lm5_A 179 GMSRKIGHACE---LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGED-----NQETYLNISQVN- 249 (327)
T ss_dssp GGCEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHTC-
T ss_pred ccccccCCccc---cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----chHHHHHHHhcc-
Confidence 99987654322 233568999999999999999999999999999999999999996531 111111111110
Q ss_pred cchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 904 NVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
..............+.+++.+||+.||++|||+.+++++-.
T Consensus 250 -------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~ 290 (327)
T 3lm5_A 250 -------VDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSW 290 (327)
T ss_dssp -------CCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGG
T ss_pred -------cccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCCHh
Confidence 01111112233456889999999999999999999998744
No 234
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=4.5e-37 Score=331.76 Aligned_cols=248 Identities=25% Similarity=0.365 Sum_probs=197.5
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEE
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
..++|++.+.||+|+||+||+|++..+++.||||++... ...+.+.+|+++++.++||||+++++++..++..|+
T Consensus 9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (276)
T 2h6d_A 9 KIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFM 88 (276)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred eeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEE
Confidence 346899999999999999999999988999999998653 345678899999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcc
Q 002063 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||+++++|.+++... ..+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||++..
T Consensus 89 v~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~ 160 (276)
T 2h6d_A 89 VMEYVSGGELFDYICKH-----GRVEEMEARRLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNM 160 (276)
T ss_dssp EEECCCSCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HHCSSCCCCCGGGEEECTTSCEEECCCCGGGC
T ss_pred EEeccCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChhhEEECCCCCEEEeecccccc
Confidence 99999999999999764 24789999999999999999999 67999999999999999999999999999986
Q ss_pred ccCCCCcccccccCcccccccccccccCCC-CccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchh
Q 002063 829 AENSPKVSDYSCFAGTHGYIAPELAYTCKV-SEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLK 907 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
...... .....|++.|+|||++.+..+ +.++||||+|+++|+|++|+.||.... ..............
T Consensus 161 ~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~--- 229 (276)
T 2h6d_A 161 MSDGEF---LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH-----VPTLFKKIRGGVFY--- 229 (276)
T ss_dssp CCC----------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHCCCC---
T ss_pred cCCCcc---eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCc-----HHHHHHHhhcCccc---
Confidence 644321 223468999999999987765 589999999999999999999996531 11111111111100
Q ss_pred hccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 908 VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
. +......+.+++.+|++.||++||++.|++++
T Consensus 230 -----~----~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 230 -----I----PEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp -----C----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred -----C----chhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 0 11123457889999999999999999999986
No 235
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=2e-37 Score=338.69 Aligned_cols=265 Identities=22% Similarity=0.295 Sum_probs=203.5
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 750 (973)
+++|++.+.||+|+||+||+|++..+++.||||++... ...+.+.+|++++++++||||+++++++..++..++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (299)
T 2r3i_A 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVF 81 (299)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEE
Confidence 46889999999999999999999988999999988653 23467889999999999999999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcccc
Q 002063 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~ 830 (973)
||++ |+|.+++... ....+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||.+....
T Consensus 82 e~~~-~~L~~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~ 154 (299)
T 2r3i_A 82 EFLH-QDLKKFMDAS---ALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154 (299)
T ss_dssp ECCS-EEHHHHHHHT---TTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHC
T ss_pred Eccc-CCHHHHHHhh---hccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHeEEcCCCCEEECcchhhhhcc
Confidence 9997 6999999764 2345788999999999999999999 7899999999999999999999999999987664
Q ss_pred CCCCcccccccCcccccccccccccCC-CCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccccc-c-hh
Q 002063 831 NSPKVSDYSCFAGTHGYIAPELAYTCK-VSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHEN-V-LK 907 (973)
Q Consensus 831 ~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-~-~~ 907 (973)
.... ......+|+.|+|||++.+.. ++.++|||||||++|||++|+.||.... ..+....+......... . ..
T Consensus 155 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~--~~~~~~~~~~~~~~~~~~~~~~ 230 (299)
T 2r3i_A 155 VPVR--TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDS--EIDQLFRIFRTLGTPDEVVWPG 230 (299)
T ss_dssp CCSB--CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCCCCTTTSTT
T ss_pred CCcc--ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCcc--HHHHHHHHHHHhCCCchhhhhH
Confidence 3322 223346899999999987765 7899999999999999999999997542 11111111111000000 0 00
Q ss_pred -----hccccc----cC---hhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 908 -----VLDCEV----AS---ESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 908 -----~~~~~~----~~---~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
...... .. .........+.+++.+|++.||++|||+.|++++-
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~hp 285 (299)
T 2r3i_A 231 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 285 (299)
T ss_dssp GGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSG
T ss_pred hhcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCh
Confidence 000000 00 00112345688999999999999999999999853
No 236
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=3.5e-37 Score=344.91 Aligned_cols=268 Identities=21% Similarity=0.261 Sum_probs=203.8
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEe--------
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLK-------- 742 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-------- 742 (973)
.++|++.+.||+|+||+||+|++..+++.||||++... .....+.+|++++++++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 56899999999999999999999999999999988552 234567899999999999999999999877
Q ss_pred CCeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEec
Q 002063 743 GGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIAD 822 (973)
Q Consensus 743 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~D 822 (973)
++..|+||||++ |+|.+.+... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|
T Consensus 96 ~~~~~lv~e~~~-~~l~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~kl~D 167 (351)
T 3mi9_A 96 KGSIYLVFDFCE-HDLAGLLSNV----LVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLAD 167 (351)
T ss_dssp -CEEEEEEECCS-EEHHHHHHCT----TSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECC
T ss_pred CceEEEEEeccC-CCHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCCEEEcc
Confidence 446899999996 5888877643 345899999999999999999999 78999999999999999999999999
Q ss_pred ccCCccccCCCC--cccccccCccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhh
Q 002063 823 FGVAKIAENSPK--VSDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHL 899 (973)
Q Consensus 823 fgl~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~ 899 (973)
||+++....... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||.... .......+....
T Consensus 168 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--~~~~~~~i~~~~ 245 (351)
T 3mi9_A 168 FGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT--EQHQLALISQLC 245 (351)
T ss_dssp CTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHH
T ss_pred chhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHHHHh
Confidence 999987653222 222344578999999999876 458999999999999999999999997542 111111111111
Q ss_pred cccc-cchhhcc----------ccccChhhHH------HHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhc
Q 002063 900 NNHE-NVLKVLD----------CEVASESIKE------DMIKLLKIAVVCTTKLPNLRPPMREVVKMLAD 952 (973)
Q Consensus 900 ~~~~-~~~~~~~----------~~~~~~~~~~------~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 952 (973)
.... ......+ .........+ ....+.+++.+||+.||++|||+.|++++-.=
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f 315 (351)
T 3mi9_A 246 GSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 315 (351)
T ss_dssp CCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGG
T ss_pred CCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCc
Confidence 1100 0000000 0000000111 13457899999999999999999999987543
No 237
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=1.5e-37 Score=363.51 Aligned_cols=253 Identities=27% Similarity=0.353 Sum_probs=207.6
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeec-----cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEE
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK-----GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~-----~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
..++|++.+.||+|+||+||+|++..+++.||||++.. ....+.+.+|++++++++||||+++++++...+..|+
T Consensus 24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 103 (484)
T 3nyv_A 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL 103 (484)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 34678999999999999999999999999999999864 3456778999999999999999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeee---cCCCceEEecccC
Q 002063 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILL---DEDYEPKIADFGV 825 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill---~~~~~~kl~Dfgl 825 (973)
||||+++|+|.+++... ..+++..+..++.|++.||+||| +++|+||||||+||++ +.++.+||+|||+
T Consensus 104 v~e~~~~~~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~ 175 (484)
T 3nyv_A 104 VGEVYTGGELFDEIISR-----KRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGL 175 (484)
T ss_dssp EECCCCSCBHHHHHHTC-----SCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCTTH
T ss_pred EEecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEecCCCCCcEEEEeeee
Confidence 99999999999998753 45889999999999999999999 7899999999999999 5678999999999
Q ss_pred CccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccc
Q 002063 826 AKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENV 905 (973)
Q Consensus 826 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 905 (973)
++....... .....||+.|+|||++.+ .++.++||||+||++|+|++|+.||.... .............
T Consensus 176 a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~-----~~~~~~~i~~~~~-- 244 (484)
T 3nyv_A 176 STHFEASKK---MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGAN-----EYDILKKVEKGKY-- 244 (484)
T ss_dssp HHHBCCCCS---HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHCCC--
T ss_pred eEEcccccc---cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHcCCC--
Confidence 987654322 233569999999999866 68999999999999999999999997541 1111111111110
Q ss_pred hhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 906 LKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
.............+.+++.+||++||.+|||+.|+++|-.
T Consensus 245 ------~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~ 284 (484)
T 3nyv_A 245 ------TFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEW 284 (484)
T ss_dssp ------CCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHH
T ss_pred ------CCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhChh
Confidence 0011112234456889999999999999999999998644
No 238
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=4.2e-37 Score=335.49 Aligned_cols=254 Identities=22% Similarity=0.313 Sum_probs=200.8
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc--ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccC
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMP 754 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 754 (973)
+|.....||+|+||+||+|++..+++.||||++... ...+.+.+|+.+++.++||||+++++++..++..++||||++
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 102 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP 102 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence 455667899999999999999998999999988763 345678899999999999999999999999999999999999
Q ss_pred CCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecC-CCceEEecccCCccccCCC
Q 002063 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE-DYEPKIADFGVAKIAENSP 833 (973)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~-~~~~kl~Dfgl~~~~~~~~ 833 (973)
+++|.+++... .....+++..+..++.|++.||+||| +.+++||||||+||+++. ++.+||+|||.+.......
T Consensus 103 ~~~L~~~l~~~--~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~ 177 (295)
T 2clq_A 103 GGSLSALLRSK--WGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN 177 (295)
T ss_dssp EEEHHHHHHHT--TCCCTTCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC--
T ss_pred CCCHHHHHHhh--ccCCCccHHHHHHHHHHHHHHHHHHH---hCCEEccCCChhhEEEECCCCCEEEeecccccccCCCC
Confidence 99999999864 23345678889999999999999999 789999999999999987 8999999999998664322
Q ss_pred CcccccccCcccccccccccccCC--CCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccc
Q 002063 834 KVSDYSCFAGTHGYIAPELAYTCK--VSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDC 911 (973)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (973)
. ......|++.|+|||++.+.. ++.++||||||+++|||++|+.||..... .....+........ +
T Consensus 178 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~~~~~~~~~--------~ 245 (295)
T 2clq_A 178 P--CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGE--PQAAMFKVGMFKVH--------P 245 (295)
T ss_dssp -----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSS--HHHHHHHHHHHCCC--------C
T ss_pred C--cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCc--hhHHHHhhcccccc--------c
Confidence 1 123356899999999987643 78999999999999999999999975321 11111111111111 1
Q ss_pred cccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 912 EVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 912 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
. .+......+.+++.+||+.||++||++.+++++-.
T Consensus 246 ~----~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~~~ 281 (295)
T 2clq_A 246 E----IPESMSAEAKAFILKCFEPDPDKRACANDLLVDEF 281 (295)
T ss_dssp C----CCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTSGG
T ss_pred c----ccccCCHHHHHHHHHHccCChhhCCCHHHHhcChh
Confidence 1 11223456788999999999999999999997644
No 239
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-37 Score=347.57 Aligned_cols=257 Identities=25% Similarity=0.280 Sum_probs=204.9
Q ss_pred HhcCCcccCeecccCcEEEEEEEEc---CCCceEEEEEeecc------ccHHHHHHHHHHHHhc-CCCceeeEeEEEEeC
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLK---KNAGTVAVKQLWKG------DGVKVFAAEMEILGKI-RHRNILKLYACLLKG 743 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~---~~~~~vavK~~~~~------~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~ 743 (973)
...+|++.+.||+|+||+||+|+.. .+++.||||++... ...+.+.+|+++++++ +||||+++++++..+
T Consensus 52 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 131 (355)
T 1vzo_A 52 GIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTE 131 (355)
T ss_dssp CGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEET
T ss_pred cccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeC
Confidence 3568999999999999999999984 46899999988642 2345677899999999 699999999999999
Q ss_pred CeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecc
Q 002063 744 GSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADF 823 (973)
Q Consensus 744 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Df 823 (973)
+..++||||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+||
T Consensus 132 ~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Df 203 (355)
T 1vzo_A 132 TKLHLILDYINGGELFTHLSQR-----ERFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDF 203 (355)
T ss_dssp TEEEEEECCCCSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCS
T ss_pred ceEEEEeecCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCcEEEeeC
Confidence 9999999999999999999864 25789999999999999999999 789999999999999999999999999
Q ss_pred cCCccccCCCCcccccccCccccccccccccc--CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcc
Q 002063 824 GVAKIAENSPKVSDYSCFAGTHGYIAPELAYT--CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNN 901 (973)
Q Consensus 824 gl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~ 901 (973)
|+++....... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... .............
T Consensus 204 G~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~-~~~~~~~~~~~~~ 281 (355)
T 1vzo_A 204 GLSKEFVADET-ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEK-NSQAEISRRILKS 281 (355)
T ss_dssp SEEEECCGGGG-GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSC-CCHHHHHHHHHHC
T ss_pred CCCeecccCCC-CcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCcc-chHHHHHHHHhcc
Confidence 99986543221 12233579999999999975 34788999999999999999999999754221 2222222222111
Q ss_pred cccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHHhhc
Q 002063 902 HENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRP-----PMREVVKMLAD 952 (973)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----t~~evl~~L~~ 952 (973)
... .+.+....+.+++.+||+.||.+|| ++.|++++..-
T Consensus 282 ~~~------------~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f 325 (355)
T 1vzo_A 282 EPP------------YPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFF 325 (355)
T ss_dssp CCC------------CCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGG
T ss_pred CCC------------CCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcch
Confidence 111 1122344678899999999999999 99999987643
No 240
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.5e-37 Score=344.20 Aligned_cols=254 Identities=27% Similarity=0.377 Sum_probs=198.1
Q ss_pred HHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeec-cccHHHHHHHHHHHHhc-CCCceeeEeEEEEe------CC
Q 002063 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK-GDGVKVFAAEMEILGKI-RHRNILKLYACLLK------GG 744 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~-~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~------~~ 744 (973)
...++|++.+.||+|+||+||+|++..+++.||||++.. ....+.+.+|+++++++ +||||+++++++.. .+
T Consensus 21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~ 100 (326)
T 2x7f_A 21 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD 100 (326)
T ss_dssp CCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCC
T ss_pred CCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccc
Confidence 345789999999999999999999998899999999865 34557789999999999 89999999999976 46
Q ss_pred eeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEeccc
Q 002063 745 SSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFG 824 (973)
Q Consensus 745 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 824 (973)
..++||||+++|+|.+++... ....+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg 174 (326)
T 2x7f_A 101 QLWLVMEFCGAGSVTDLIKNT---KGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFG 174 (326)
T ss_dssp EEEEEEECCTTEEHHHHHHHS---GGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCT
T ss_pred eEEEEEEcCCCCcHHHHHHhc---ccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCcHHHEEEcCCCCEEEeeCc
Confidence 789999999999999999864 2345788999999999999999999 7899999999999999999999999999
Q ss_pred CCccccCCCCcccccccCcccccccccccc-----cCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhh
Q 002063 825 VAKIAENSPKVSDYSCFAGTHGYIAPELAY-----TCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHL 899 (973)
Q Consensus 825 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~ 899 (973)
++........ ......||+.|+|||++. +..++.++|||||||++|+|++|+.||.... .........
T Consensus 175 ~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~ 247 (326)
T 2x7f_A 175 VSAQLDRTVG--RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH-----PMRALFLIP 247 (326)
T ss_dssp TTC---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSC-----HHHHHHHHH
T ss_pred CceecCcCcc--ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCc-----HHHHHHHhh
Confidence 9876543211 223356899999999986 5678899999999999999999999996531 111111111
Q ss_pred cccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 900 NNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
.... +.. ........+.+++.+||+.||.+||++.+++++
T Consensus 248 ~~~~-------~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 248 RNPA-------PRL---KSKKWSKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp HSCC-------CCC---SCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred cCcc-------ccC---CccccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 1100 000 011223468899999999999999999999985
No 241
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=6.9e-38 Score=353.15 Aligned_cols=253 Identities=9% Similarity=-0.025 Sum_probs=181.9
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc-----cHHHHHHHHHHHHhc--CCCceeeEe-------EEEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-----GVKVFAAEMEILGKI--RHRNILKLY-------ACLL 741 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l--~hpniv~l~-------~~~~ 741 (973)
.+|++.+.||+|+||+||+|++..+++.||||++.... ..+.+.+|+++++.+ +||||++++ +++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 35889999999999999999999899999999987732 345567785554444 699988755 4554
Q ss_pred eC-----------------CeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHH------HHHHHHHHHHHhHhhhcCCC
Q 002063 742 KG-----------------GSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRR------YKIALGAAKGIAYLHHDCSP 798 (973)
Q Consensus 742 ~~-----------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~------~~i~~~ia~~l~~LH~~~~~ 798 (973)
.+ ...|+||||++ |+|.+++..... .+.+..+ ..++.|+++||+||| ++
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~----~~~~~~~~~~~vk~~i~~qi~~aL~~LH---~~ 213 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF----VYVFRGDEGILALHILTAQLIRLAANLQ---SK 213 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH----SCCCCHHHHHHHHHHHHHHHHHHHHHHH---HT
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc----ccchhhhhhhhhHHHHHHHHHHHHHHHH---HC
Confidence 33 33799999998 899999986522 2233444 677899999999999 78
Q ss_pred CeEecCCCCCCeeecCCCceEEecccCCccccCCCCcccccccCccccccccccccc--CCCCccchHHHHHHHHHHHHh
Q 002063 799 PIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYT--CKVSEKSDVFSFGVVLLELVT 876 (973)
Q Consensus 799 ~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~~l~ell~ 876 (973)
+|+||||||+|||++.++.+||+|||+++..... .....+|+.|+|||++.+ ..++.++|||||||++|||++
T Consensus 214 ~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~ellt 288 (371)
T 3q60_A 214 GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR-----GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWC 288 (371)
T ss_dssp TEEETTCSGGGEEECTTSCEEECCGGGEEETTCE-----EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHH
T ss_pred CCccCcCCHHHEEECCCCCEEEEecceeeecCCC-----ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHh
Confidence 9999999999999999999999999999865422 113456799999999987 679999999999999999999
Q ss_pred CCCCCCcccCCCccHHHHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 877 GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 877 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
|+.||......... ..........................+.+++.+||+.||++|||+.++++|
T Consensus 289 g~~Pf~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 353 (371)
T 3q60_A 289 LFLPFGLVTPGIKG--------SWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMET 353 (371)
T ss_dssp SSCSTTBCCTTCTT--------CCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTS
T ss_pred CCCCCCCcCccccc--------chhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 99999765221110 000000000001111111112335578899999999999999999999864
No 242
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.1e-37 Score=342.50 Aligned_cols=267 Identities=24% Similarity=0.277 Sum_probs=199.5
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc-------cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCee
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-------GVKVFAAEMEILGKIRHRNILKLYACLLKGGSS 746 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~-------~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 746 (973)
...+|++.+.||+|+||+||+|++..+++.||||++.... ..+.+.+|++++++++||||+++++++..++..
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI 87 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence 4568999999999999999999999999999999986421 123578999999999999999999999999999
Q ss_pred EEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCC
Q 002063 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVA 826 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~ 826 (973)
++||||+++ +|.+++... ...+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 88 ~lv~e~~~~-~l~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a 159 (346)
T 1ua2_A 88 SLVFDFMET-DLEVIIKDN----SLVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLA 159 (346)
T ss_dssp EEEEECCSE-EHHHHHTTC----CSSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCGGG
T ss_pred EEEEEcCCC-CHHHHHHhc----CcCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCCHHHEEEcCCCCEEEEecccc
Confidence 999999975 888887642 345788889999999999999999 789999999999999999999999999999
Q ss_pred ccccCCCCcccccccCcccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcc-ccc
Q 002063 827 KIAENSPKVSDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNN-HEN 904 (973)
Q Consensus 827 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~ 904 (973)
+....... ......||+.|+|||++.+. .++.++||||+||++|||++|..||..... .............. ...
T Consensus 160 ~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~-~~~~~~i~~~~~~~~~~~ 236 (346)
T 1ua2_A 160 KSFGSPNR--AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSD-LDQLTRIFETLGTPTEEQ 236 (346)
T ss_dssp STTTSCCC--CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCCCCTTT
T ss_pred eeccCCcc--cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCH-HHHHHHHHHHcCCCChhh
Confidence 86643322 22345789999999998764 588999999999999999999999865411 11111111111000 000
Q ss_pred ch------hhccc-cccC----hhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 905 VL------KVLDC-EVAS----ESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 905 ~~------~~~~~-~~~~----~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
.. +.... .... .........+.+++.+|++.||++|||+.|++++-.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~ 294 (346)
T 1ua2_A 237 WPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKY 294 (346)
T ss_dssp SSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGG
T ss_pred hhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChh
Confidence 00 00000 0000 001223467889999999999999999999998754
No 243
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=8.8e-38 Score=340.11 Aligned_cols=260 Identities=26% Similarity=0.338 Sum_probs=198.6
Q ss_pred hcCCcccCeecccCcEEEEEEEEcC-CC--ceEEEEEeec-----cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCee
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKK-NA--GTVAVKQLWK-----GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSS 746 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~-~~--~~vavK~~~~-----~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 746 (973)
..+|++.+.||+|+||+||+|++.. ++ ..||||++.. ....+.+.+|++++++++||||+++++++..+. .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 3578999999999999999998753 23 3699998864 234567889999999999999999999987765 8
Q ss_pred EEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCC
Q 002063 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVA 826 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~ 826 (973)
++||||+++|+|.+++... ...+++..+..++.|+++||+||| +.+++||||||+||+++.++.+||+|||++
T Consensus 96 ~~v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~ 168 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKH----QGHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLM 168 (291)
T ss_dssp EEEEECCTTCBHHHHHHHH----GGGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTC
T ss_pred eeeEecccCCCHHHHHHhc----cCCcCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEEcCCCCEEEcccccc
Confidence 8999999999999999864 235789999999999999999999 789999999999999999999999999999
Q ss_pred ccccCCCCcc-cccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhccccc
Q 002063 827 KIAENSPKVS-DYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHEN 904 (973)
Q Consensus 827 ~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 904 (973)
.......... ......+|..|+|||++.+..++.++||||||+++|||++ |+.||.... ..............
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-----~~~~~~~~~~~~~~ 243 (291)
T 1u46_A 169 RALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLN-----GSQILHKIDKEGER 243 (291)
T ss_dssp EECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCC-----HHHHHHHHHTSCCC
T ss_pred ccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCC-----HHHHHHHHHccCCC
Confidence 8765433221 2223457889999999998889999999999999999999 999996541 11222221111110
Q ss_pred chhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCCC
Q 002063 905 VLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPCT 957 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~ 957 (973)
..........+.+++.+||+.||++||++.+++++|+++.+..
T Consensus 244 ----------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 286 (291)
T 1u46_A 244 ----------LPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTD 286 (291)
T ss_dssp ----------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred ----------CCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccc
Confidence 0111223456889999999999999999999999999887644
No 244
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=1.8e-37 Score=339.68 Aligned_cols=255 Identities=22% Similarity=0.342 Sum_probs=202.1
Q ss_pred HHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeec--cccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEE
Q 002063 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK--GDGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~--~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 750 (973)
...++|++.+.||+|+||+||+|++..+++.||+|++.. ....+.+.+|++++++++||||+++++++..++..++||
T Consensus 16 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 95 (302)
T 2j7t_A 16 DPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMI 95 (302)
T ss_dssp CGGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEE
T ss_pred CCccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEE
Confidence 445689999999999999999999999899999998865 345678899999999999999999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcccc
Q 002063 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~ 830 (973)
||+++++|.+++... ...+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||++....
T Consensus 96 e~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 168 (302)
T 2j7t_A 96 EFCPGGAVDAIMLEL----DRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNL 168 (302)
T ss_dssp ECCTTEEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHH
T ss_pred EeCCCCcHHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEECCCCCEEEEECCCCcccc
Confidence 999999999998753 235889999999999999999999 7899999999999999999999999999875432
Q ss_pred CCCCcccccccCccccccccccc-----ccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccc
Q 002063 831 NSPKVSDYSCFAGTHGYIAPELA-----YTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENV 905 (973)
Q Consensus 831 ~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 905 (973)
... .......||+.|+|||++ .+..++.++||||||+++|+|++|+.||.... ..............
T Consensus 169 ~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~- 240 (302)
T 2j7t_A 169 KTL--QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN-----PMRVLLKIAKSDPP- 240 (302)
T ss_dssp HHH--HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSC-----HHHHHHHHHHSCCC-
T ss_pred ccc--cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCC-----HHHHHHHHhccCCc-
Confidence 110 112234689999999998 36678899999999999999999999997531 11111111111110
Q ss_pred hhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 906 LKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
.. .........+.+++.+||+.||++|||+.+++++-
T Consensus 241 -~~-------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~ 277 (302)
T 2j7t_A 241 -TL-------LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHP 277 (302)
T ss_dssp -CC-------SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTST
T ss_pred -cc-------CCccccCHHHHHHHHHHcccChhhCCCHHHHhcCh
Confidence 00 01122345688999999999999999999998753
No 245
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=4.7e-37 Score=370.32 Aligned_cols=250 Identities=27% Similarity=0.347 Sum_probs=207.3
Q ss_pred HHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeec-----cccHHHHHHHHHHHHhc-CCCceeeEeEEEEeCCee
Q 002063 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWK-----GDGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSS 746 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~-----~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~ 746 (973)
....+|++.+.||+|+||+||+|++..+++.||||++.+ ....+.+.+|..++..+ +||+|+++++++.+.+..
T Consensus 338 ~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~ 417 (674)
T 3pfq_A 338 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL 417 (674)
T ss_dssp --CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEE
T ss_pred ccccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEE
Confidence 345789999999999999999999999999999999875 23456678899999987 799999999999999999
Q ss_pred EEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCC
Q 002063 747 FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVA 826 (973)
Q Consensus 747 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~ 826 (973)
|+||||+++|+|.+++... ..+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||++
T Consensus 418 ~lV~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~gIiHrDLKp~NILl~~~g~ikL~DFGla 489 (674)
T 3pfq_A 418 YFVMEYVNGGDLMYHIQQV-----GRFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMC 489 (674)
T ss_dssp EEEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTSEECCCCCSTTEEECSSSCEEECCCTTC
T ss_pred EEEEeCcCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEeccCChhhEEEcCCCcEEEeeccee
Confidence 9999999999999999864 35889999999999999999999 789999999999999999999999999999
Q ss_pred ccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccch
Q 002063 827 KIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVL 906 (973)
Q Consensus 827 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (973)
+...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||... +..............
T Consensus 490 ~~~~~~~--~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~-----~~~~~~~~i~~~~~~-- 560 (674)
T 3pfq_A 490 KENIWDG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE-----DEDELFQSIMEHNVA-- 560 (674)
T ss_dssp EECCCTT--CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHSSCCC--
T ss_pred eccccCC--cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCC-----CHHHHHHHHHhCCCC--
Confidence 8543222 1233467999999999999999999999999999999999999999753 122222222221111
Q ss_pred hhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCH-----HHHHHH
Q 002063 907 KVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPM-----REVVKM 949 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~-----~evl~~ 949 (973)
.+......+.+++.+||+.||++||++ .||++|
T Consensus 561 ----------~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h 598 (674)
T 3pfq_A 561 ----------YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 598 (674)
T ss_dssp ----------CCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred ----------CCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcC
Confidence 112234568899999999999999998 778765
No 246
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1e-37 Score=347.76 Aligned_cols=254 Identities=23% Similarity=0.318 Sum_probs=199.9
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc---ccHHHHHHHHHH-HHhcCCCceeeEeEEEEeCCeeEEE
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEI-LGKIRHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~-l~~l~hpniv~l~~~~~~~~~~~lv 749 (973)
...+|++.+.||+|+||+||+|++..+++.||||++... ....++..|..+ ++.++||||+++++++..++..|+|
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 128 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 128 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEE
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEE
Confidence 345788999999999999999999988999999998653 233445556555 7778999999999999999999999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCC-CeEecCCCCCCeeecCCCceEEecccCCcc
Q 002063 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSP-PIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~-~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
|||+++ +|.+++.... .....+++..+..++.|++.||+||| +. +|+||||||+||+++.++.+||+|||+++.
T Consensus 129 ~e~~~~-~L~~~l~~~~-~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~ 203 (340)
T 3an0_A 129 MELMDT-SLDKFYKQVI-DKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGY 203 (340)
T ss_dssp ECCCSE-EHHHHHHHHH-HTSCCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCSCCSTTEEECSTTCEEECCCSHHHH
T ss_pred HHHhhC-cHHHHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeeCCCcee
Confidence 999975 9999987642 23456899999999999999999999 54 999999999999999999999999999976
Q ss_pred ccCCCCcccccccCcccccccccccc----cCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccccc
Q 002063 829 AENSPKVSDYSCFAGTHGYIAPELAY----TCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHEN 904 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 904 (973)
.... .......||+.|+|||++. +..++.++|||||||++|||++|+.||..... ....+........
T Consensus 204 ~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~----~~~~~~~~~~~~~- 275 (340)
T 3an0_A 204 LVDS---VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT----PFQQLKQVVEEPS- 275 (340)
T ss_dssp HSCH---HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSC----HHHHHHHHHHSCC-
T ss_pred cccc---cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccc----hHHHHHHHhcCCC-
Confidence 6432 1122346899999999964 44789999999999999999999999975321 1111111111110
Q ss_pred chhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 905 VLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
.. .........+.+++.+||+.||++||++.|++++
T Consensus 276 ------~~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 311 (340)
T 3an0_A 276 ------PQ---LPADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 311 (340)
T ss_dssp ------CC---CCGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred ------CC---CCcccCCHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 00 0111234568899999999999999999999885
No 247
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=3.4e-37 Score=340.56 Aligned_cols=254 Identities=27% Similarity=0.330 Sum_probs=200.2
Q ss_pred HHHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc----------cHHHHHHHHHHHHhcCCCceeeEeEEEE
Q 002063 672 AEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD----------GVKVFAAEMEILGKIRHRNILKLYACLL 741 (973)
Q Consensus 672 ~~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~----------~~~~~~~E~~~l~~l~hpniv~l~~~~~ 741 (973)
....++|++.+.||+|+||+||+|++..+++.||||++.... ....+.+|++++++++||||+++++++.
T Consensus 6 ~~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 85 (322)
T 2ycf_A 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD 85 (322)
T ss_dssp HHHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred hhhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEc
Confidence 344568999999999999999999999999999999886421 2234789999999999999999999987
Q ss_pred eCCeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCc---e
Q 002063 742 KGGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYE---P 818 (973)
Q Consensus 742 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~---~ 818 (973)
.+. .|+||||+++|+|.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++. +
T Consensus 86 ~~~-~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~ 156 (322)
T 2ycf_A 86 AED-YYIVLELMEGGELFDKVVG-----NKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLI 156 (322)
T ss_dssp SSS-EEEEEECCTTEETHHHHST-----TCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSSSCCE
T ss_pred CCc-eEEEEecCCCCcHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEecCCCCCeE
Confidence 655 8999999999999998864 345889999999999999999999 789999999999999987654 9
Q ss_pred EEecccCCccccCCCCcccccccCcccccccccccc---cCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHH
Q 002063 819 KIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAY---TCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWV 895 (973)
Q Consensus 819 kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~ 895 (973)
||+|||++....... ......||+.|+|||++. +..++.++|||||||++|+|++|+.||...... ......+
T Consensus 157 kl~Dfg~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~~~ 232 (322)
T 2ycf_A 157 KITDFGHSKILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ-VSLKDQI 232 (322)
T ss_dssp EECCCTTCEECCCCH---HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCS-SCHHHHH
T ss_pred EEccCccceeccccc---ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchH-HHHHHHH
Confidence 999999998664321 122346899999999974 567889999999999999999999999754222 1222222
Q ss_pred HHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 896 STHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
..... .............+.+++.+||+.||++||++.+++++
T Consensus 233 ~~~~~-----------~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h 275 (322)
T 2ycf_A 233 TSGKY-----------NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 275 (322)
T ss_dssp HHTCC-----------CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HhCcc-----------ccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence 11100 00011112234568899999999999999999999864
No 248
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=3.5e-37 Score=351.64 Aligned_cols=271 Identities=22% Similarity=0.270 Sum_probs=188.7
Q ss_pred CCcc-cCeecccCcEEEEEEEEc--CCCceEEEEEeeccccHHHHHHHHHHHHhcCCCceeeEeEEEEe--CCeeEEEEE
Q 002063 677 NLEE-DNLIGSGGTGKVYRLDLK--KNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYACLLK--GGSSFLVLE 751 (973)
Q Consensus 677 ~~~~-~~~lG~G~~g~Vy~a~~~--~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~--~~~~~lv~e 751 (973)
.|++ .++||+|+||+||+|+++ .+++.||||++........+.+|++++++++||||+++++++.. +...|+|||
T Consensus 21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e 100 (405)
T 3rgf_A 21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFD 100 (405)
T ss_dssp HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEE
T ss_pred hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEe
Confidence 4555 568999999999999976 46889999999876666788999999999999999999999965 678999999
Q ss_pred ccCCCchHHHHHhhhcC----CCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeee----cCCCceEEecc
Q 002063 752 YMPNGNLFQALHKRVKE----GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILL----DEDYEPKIADF 823 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~----~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill----~~~~~~kl~Df 823 (973)
|++ |+|.+++...... ....+++..+..++.|++.||+||| +.+|+||||||+||++ +.++.+||+||
T Consensus 101 ~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Df 176 (405)
T 3rgf_A 101 YAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADM 176 (405)
T ss_dssp CCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECCSSTTTTCEEECCT
T ss_pred CCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeCCCcCHHHeEEecCCCCCCcEEEEEC
Confidence 995 5888888654221 1224889999999999999999999 7899999999999999 67789999999
Q ss_pred cCCccccCCCC-cccccccCcccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccCCC--------ccHHH
Q 002063 824 GVAKIAENSPK-VSDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDG--------KDIVY 893 (973)
Q Consensus 824 gl~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~--------~~~~~ 893 (973)
|+++....... ........||+.|+|||++.+. .++.++||||+||++|||++|+.||.....+. ..+..
T Consensus 177 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~ 256 (405)
T 3rgf_A 177 GFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDR 256 (405)
T ss_dssp TCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHH
T ss_pred CCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHH
Confidence 99987653321 1223346789999999998874 58999999999999999999999997542210 11111
Q ss_pred HHHHhhcccc--cchhh------------c-cccccChhhH--------HHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 894 WVSTHLNNHE--NVLKV------------L-DCEVASESIK--------EDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 894 ~~~~~~~~~~--~~~~~------------~-~~~~~~~~~~--------~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
.+.. ..... ....+ + .......... .....+.+++.+||++||.+|||+.|+++|-
T Consensus 257 i~~~-~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp 335 (405)
T 3rgf_A 257 IFNV-MGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDP 335 (405)
T ss_dssp HHHH-HCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred HHHh-hCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcCh
Confidence 1110 00000 00000 0 0000000000 0134678999999999999999999999986
Q ss_pred hc
Q 002063 951 AD 952 (973)
Q Consensus 951 ~~ 952 (973)
.=
T Consensus 336 ~f 337 (405)
T 3rgf_A 336 YF 337 (405)
T ss_dssp GG
T ss_pred hh
Confidence 53
No 249
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=5.7e-37 Score=344.70 Aligned_cols=264 Identities=22% Similarity=0.285 Sum_probs=202.8
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeC-----CeeE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKG-----GSSF 747 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-----~~~~ 747 (973)
.+|++.+.||+|+||+||+|++..+++.||||++... ...+.+.+|++++++++||||+++++++... ...|
T Consensus 27 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 106 (364)
T 3qyz_A 27 PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY 106 (364)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEE
T ss_pred ccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEE
Confidence 4799999999999999999999999999999998753 2346788999999999999999999998754 4689
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCc
Q 002063 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
+||||++ |+|.+++... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++
T Consensus 107 iv~e~~~-~~L~~~l~~~------~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~ 176 (364)
T 3qyz_A 107 IVQDLME-TDLYKLLKTQ------HLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLAR 176 (364)
T ss_dssp EEEECCS-EEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEcccC-cCHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChHhEEECCCCCEEEEeCcceE
Confidence 9999996 6999998753 4889999999999999999999 7899999999999999999999999999998
Q ss_pred cccCCCCc-ccccccCccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccccc-
Q 002063 828 IAENSPKV-SDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHEN- 904 (973)
Q Consensus 828 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~- 904 (973)
........ .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.... ..+....+.........
T Consensus 177 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--~~~~~~~i~~~~~~~~~~ 254 (364)
T 3qyz_A 177 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH--YLDQLNHILGILGSPSQE 254 (364)
T ss_dssp ECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSS--GGGHHHHHHHHHCSCCHH
T ss_pred ecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCC--hHHHHHHHHHHhCCCCHH
Confidence 66533221 11234579999999998654 458999999999999999999999997542 11111111111110000
Q ss_pred -ch------------hhcccccc--ChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 905 -VL------------KVLDCEVA--SESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 905 -~~------------~~~~~~~~--~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
.. ........ ..........+.+++.+||++||++|||+.|+++|-.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 316 (364)
T 3qyz_A 255 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 316 (364)
T ss_dssp HHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGG
T ss_pred HHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcc
Confidence 00 00000000 0001123456889999999999999999999998754
No 250
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=1.1e-36 Score=332.53 Aligned_cols=253 Identities=26% Similarity=0.318 Sum_probs=205.5
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc-----------cHHHHHHHHHHHHhcC-CCceeeEeEEEE
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-----------GVKVFAAEMEILGKIR-HRNILKLYACLL 741 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~-----------~~~~~~~E~~~l~~l~-hpniv~l~~~~~ 741 (973)
..++|++.+.||+|+||.||+|++..+++.||||++.... ..+.+.+|+++++++. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 3568999999999999999999999999999999986431 2356788999999995 999999999999
Q ss_pred eCCeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEe
Q 002063 742 KGGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIA 821 (973)
Q Consensus 742 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~ 821 (973)
.+...++||||+++++|.+++... ..+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~ 166 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTEK-----VTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLT 166 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEEC
T ss_pred cCCeEEEEEeccCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEcCCCcEEEe
Confidence 999999999999999999999764 35789999999999999999999 7899999999999999999999999
Q ss_pred cccCCccccCCCCcccccccCcccccccccccc------cCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHH
Q 002063 822 DFGVAKIAENSPKVSDYSCFAGTHGYIAPELAY------TCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWV 895 (973)
Q Consensus 822 Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~ 895 (973)
|||.+........ .....|++.|+|||++. ...++.++||||+|+++|||++|+.||.... .....
T Consensus 167 dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-----~~~~~ 238 (298)
T 1phk_A 167 DFGFSCQLDPGEK---LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK-----QMLML 238 (298)
T ss_dssp CCTTCEECCTTCC---BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHH
T ss_pred cccchhhcCCCcc---cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCcc-----HHHHH
Confidence 9999987654322 23356899999999985 4568899999999999999999999996531 11111
Q ss_pred HHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 896 STHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
........ .............+.+++.+||+.||++||++.|++++-
T Consensus 239 ~~~~~~~~--------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~ 285 (298)
T 1phk_A 239 RMIMSGNY--------QFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHP 285 (298)
T ss_dssp HHHHHTCC--------CCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSG
T ss_pred HHHhcCCc--------ccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhCh
Confidence 11111110 000111123345688999999999999999999998754
No 251
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=4.8e-37 Score=351.27 Aligned_cols=264 Identities=25% Similarity=0.328 Sum_probs=197.5
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHhcCCCceeeEeEEEEeC----C--eeEEE
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYACLLKG----G--SSFLV 749 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~----~--~~~lv 749 (973)
.+|++.+.||+|+||+||+|++..+++.||||++..... ...+|++++++++||||+++++++... + ..++|
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv 131 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR--FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV 131 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT--SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch--hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEee
Confidence 468899999999999999999999899999999865432 235799999999999999999988542 2 36789
Q ss_pred EEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCC-CceEEecccCCcc
Q 002063 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDED-YEPKIADFGVAKI 828 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~-~~~kl~Dfgl~~~ 828 (973)
|||+++ ++.+.+... ......+++..+..++.|+++||+||| +.+|+||||||+|||++.+ +.+||+|||+++.
T Consensus 132 ~e~~~~-~l~~~~~~~-~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~ 206 (420)
T 1j1b_A 132 LDYVPE-TVYRVARHY-SRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 206 (420)
T ss_dssp EECCCE-EHHHHHHHH-HHTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred hhcccc-cHHHHHHHH-hhccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChhhEEEeCCCCeEEeccchhhhh
Confidence 999965 777776643 223456899999999999999999999 8899999999999999965 5689999999987
Q ss_pred ccCCCCcccccccCcccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhh--------
Q 002063 829 AENSPKVSDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHL-------- 899 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~-------- 899 (973)
...... .....||+.|+|||++.+. .++.++||||+||++|||++|+.||..... ...+...+...-
T Consensus 207 ~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~-~~~l~~i~~~lg~p~~~~~~ 282 (420)
T 1j1b_A 207 LVRGEP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG-VDQLVEIIKVLGTPTREQIR 282 (420)
T ss_dssp CCTTCC---CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCSCCHHHHH
T ss_pred cccCCC---ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCHHHHH
Confidence 644322 2235689999999998765 789999999999999999999999975421 111111111100
Q ss_pred cccccchhhccccccChh-----hHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 900 NNHENVLKVLDCEVASES-----IKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
.....+.+...+...... .......+.+++.+||+.||.+||++.|+++|-
T Consensus 283 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp 338 (420)
T 1j1b_A 283 EMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 338 (420)
T ss_dssp HHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred hhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCH
Confidence 000000011011111111 112245688999999999999999999999764
No 252
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=2.5e-37 Score=370.21 Aligned_cols=247 Identities=25% Similarity=0.297 Sum_probs=196.1
Q ss_pred CeecccCcEEEEEEEEc--CCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEEccCC
Q 002063 682 NLIGSGGTGKVYRLDLK--KNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLEYMPN 755 (973)
Q Consensus 682 ~~lG~G~~g~Vy~a~~~--~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 755 (973)
+.||+|+||+||+|.+. .+++.||||+++.. ...+++.+|++++++++||||+++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999654 55688999998763 235789999999999999999999999864 568899999999
Q ss_pred CchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCc
Q 002063 756 GNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKV 835 (973)
Q Consensus 756 gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 835 (973)
|+|.+++... ..+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++........
T Consensus 454 g~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~yLH---~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 525 (635)
T 4fl3_A 454 GPLNKYLQQN-----RHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 525 (635)
T ss_dssp EEHHHHHHHC-----TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC----
T ss_pred CCHHHHHhhC-----CCCCHHHHHHHHHHHHHHHHHHH---HCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccc
Confidence 9999999753 35889999999999999999999 789999999999999999999999999999876543221
Q ss_pred -ccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchhhccccc
Q 002063 836 -SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEV 913 (973)
Q Consensus 836 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (973)
.......+|+.|+|||++.+..++.++|||||||++|||++ |+.||.... .......+.. ..
T Consensus 526 ~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~--~~~~~~~i~~----~~---------- 589 (635)
T 4fl3_A 526 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK--GSEVTAMLEK----GE---------- 589 (635)
T ss_dssp ---------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC--HHHHHHHHHT----TC----------
T ss_pred cccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHHc----CC----------
Confidence 22223456789999999999999999999999999999998 999997542 1111111111 10
Q ss_pred cChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcC
Q 002063 914 ASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADA 953 (973)
Q Consensus 914 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 953 (973)
....+......+.+++.+||+.||++||++.+|++.|+++
T Consensus 590 ~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~ 629 (635)
T 4fl3_A 590 RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 629 (635)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 0111123345688999999999999999999999999864
No 253
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=2.8e-37 Score=346.32 Aligned_cols=259 Identities=22% Similarity=0.296 Sum_probs=184.8
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeC------C
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKG------G 744 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~------~ 744 (973)
.++|++.+.||+|+||+||+|++..+++.||||++... ...+.+.+|+++++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 36899999999999999999999999999999998652 3456778999999999999999999998654 5
Q ss_pred eeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEeccc
Q 002063 745 SSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFG 824 (973)
Q Consensus 745 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 824 (973)
..|+||||+ +++|.+++.. ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kL~DFG 177 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKC------QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFG 177 (367)
T ss_dssp CCEEEEECC-CEECC-----------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC--
T ss_pred eEEEEeccc-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHhhEEECCCCCEEEeecc
Confidence 679999999 7899998864 35889999999999999999999 7899999999999999999999999999
Q ss_pred CCccccCCCCcccccccCccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccc
Q 002063 825 VAKIAENSPKVSDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHE 903 (973)
Q Consensus 825 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 903 (973)
+++..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||.... ..+....+........
T Consensus 178 ~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--~~~~l~~i~~~~g~p~ 250 (367)
T 2fst_X 178 LARHTADE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPG 250 (367)
T ss_dssp ------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCSCC
T ss_pred cccccccc-----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHhCCCC
Confidence 99865432 233578999999999876 678999999999999999999999997542 1111111111110000
Q ss_pred -c-ch--------hhcc--ccccC----hhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 904 -N-VL--------KVLD--CEVAS----ESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 904 -~-~~--------~~~~--~~~~~----~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
. .. .... +.... .........+.+++.+||+.||.+|||+.|+++|-
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp 313 (367)
T 2fst_X 251 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 313 (367)
T ss_dssp HHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred HHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcCh
Confidence 0 00 0000 00000 00112235678999999999999999999999874
No 254
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=2.2e-36 Score=343.48 Aligned_cols=334 Identities=18% Similarity=0.183 Sum_probs=228.5
Q ss_pred CCCCEEEcccccCCCCCChhhhccCCCCeeeccccccccccchhhhccccccEEEeecccCCCCCCccccccccccEEEe
Q 002063 193 KNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDI 272 (973)
Q Consensus 193 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L 272 (973)
+++++|++++|.++...+..+..+++|++|+|++|++++..+..|..+++|++|+|++|.+++..|..|.++++|++|+|
T Consensus 45 ~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 124 (390)
T 3o6n_A 45 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 124 (390)
T ss_dssp CCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEEC
Confidence 45666666666666444444566666666666666666555556666666666666666666555566666666777777
Q ss_pred eccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCccccceeeccccccCCCCCcccccccccccccccccccccc
Q 002063 273 SSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGS 352 (973)
Q Consensus 273 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~ 352 (973)
++|+++...+..+.++++|++|++++|++.+..+..+..+++|+.|++++|++++. .++.+++|+.|++++|.+++
T Consensus 125 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~- 200 (390)
T 3o6n_A 125 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLST- 200 (390)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSE-
T ss_pred CCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeecccccccc-
Confidence 76666633333346666666666666666665555666666666666666666532 23445556666666665541
Q ss_pred CChhhhhhhhHHHHHhhhccCCCCCCCcccCccccceEecccccccccCCccccCCCCcceEeccCCcCCCCCCCccCCC
Q 002063 353 FPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLS 432 (973)
Q Consensus 353 ~p~~~~~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~ 432 (973)
+...++|++|++++|.+. ..+. ...
T Consensus 201 ----------------------------~~~~~~L~~L~l~~n~l~------------------------~~~~---~~~ 225 (390)
T 3o6n_A 201 ----------------------------LAIPIAVEELDASHNSIN------------------------VVRG---PVN 225 (390)
T ss_dssp ----------------------------EECCSSCSEEECCSSCCC------------------------EEEC---CCC
T ss_pred ----------------------------cCCCCcceEEECCCCeee------------------------eccc---ccc
Confidence 111234555555555554 3222 123
Q ss_pred CCCCEEEcccCCCCCCCChhhhcCCCCCEEecCCCcCCCCccccccccccCCEEEccCcccccCCCccccCccccchhhc
Q 002063 433 TSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNL 512 (973)
Q Consensus 433 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 512 (973)
++|+.|+|++|++++. ..+..+++|++|+|++|.+++..|..|..+++|++|+|++|++++ +|..+..+++|+.|+|
T Consensus 226 ~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L 302 (390)
T 3o6n_A 226 VELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDL 302 (390)
T ss_dssp SSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEEC
T ss_pred ccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEEC
Confidence 5677888888888743 578888888888888888887778888888899999999998885 4666678889999999
Q ss_pred cccccccCCCccccccCCCCeeecCCCccCCCCCchhhccc-CceEEccCCccccccCcccccCCCCccccCCCCCccCc
Q 002063 513 ARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLK-LSSIDLSENQLSGSVPLDFLRMGGDGAFAGNEGLCLDQ 591 (973)
Q Consensus 513 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~n~~lc~~~ 591 (973)
++|+++ .+|..+..+++|+.|+|++|++++ +| +..++ |+.|++++|+|+|.+...+.+......+.+++..|..+
T Consensus 303 ~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~-~~--~~~~~~L~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~c~~~ 378 (390)
T 3o6n_A 303 SHNHLL-HVERNQPQFDRLENLYLDHNSIVT-LK--LSTHHTLKNLTLSHNDWDCNSLRALFRNVARPAVDDADQHCKID 378 (390)
T ss_dssp CSSCCC-CCGGGHHHHTTCSEEECCSSCCCC-CC--CCTTCCCSEEECCSSCEEHHHHHHHTTTCCTTTBCCCCSCCCTT
T ss_pred CCCcce-ecCccccccCcCCEEECCCCccce-eC--chhhccCCEEEcCCCCccchhHHHHHHHHHhhcccccCceeccc
Confidence 999998 567778899999999999999985 44 44454 99999999999998877655544446778888888764
Q ss_pred c
Q 002063 592 S 592 (973)
Q Consensus 592 ~ 592 (973)
.
T Consensus 379 ~ 379 (390)
T 3o6n_A 379 Y 379 (390)
T ss_dssp C
T ss_pred c
Confidence 4
No 255
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=2.7e-36 Score=341.35 Aligned_cols=204 Identities=24% Similarity=0.292 Sum_probs=175.5
Q ss_pred CHHHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc-cHHHHHHHHHHHHhcC-CC-----ceeeEeEEEEeC
Q 002063 671 DAEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-GVKVFAAEMEILGKIR-HR-----NILKLYACLLKG 743 (973)
Q Consensus 671 ~~~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~-hp-----niv~l~~~~~~~ 743 (973)
+....++|++.+.||+|+||+||+|++..+++.||||++.... ...++.+|+++++.++ |+ +|+++++++..+
T Consensus 49 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~ 128 (382)
T 2vx3_A 49 GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFR 128 (382)
T ss_dssp TCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEET
T ss_pred CCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccC
Confidence 3455689999999999999999999999999999999987643 3456778999988884 44 599999999999
Q ss_pred CeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeec--CCCceEEe
Q 002063 744 GSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLD--EDYEPKIA 821 (973)
Q Consensus 744 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~--~~~~~kl~ 821 (973)
+..++||||++ |+|.+++... ....+++..+..++.|++.||+|||.+ +.+|+||||||+||+++ .++.+||+
T Consensus 129 ~~~~lv~e~~~-~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~ 203 (382)
T 2vx3_A 129 NHLCLVFEMLS-YNLYDLLRNT---NFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIV 203 (382)
T ss_dssp TEEEEEEECCC-CBHHHHHHHT---TTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEEC
T ss_pred CceEEEEecCC-CCHHHHHhhc---CcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEE
Confidence 99999999995 6999999864 224588999999999999999999953 46899999999999995 47789999
Q ss_pred cccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcc
Q 002063 822 DFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEE 884 (973)
Q Consensus 822 Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~ 884 (973)
|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 204 DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 204 DFGSSCQLGQR-----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp CCTTCEETTCC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred eccCceecccc-----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 99999876432 22356899999999999999999999999999999999999999754
No 256
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=8.4e-38 Score=342.42 Aligned_cols=264 Identities=27% Similarity=0.401 Sum_probs=187.8
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEEE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 751 (973)
.++|++.+.||+|+||+||+|++..+++.||||++... ...+.+.+|++++++++||||+++++++..++..++|||
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 93 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMK 93 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEE
T ss_pred hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEeh
Confidence 46899999999999999999999888999999988653 345667899999999999999999999999999999999
Q ss_pred ccCCCchHHHHHhhhcC---CCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcc
Q 002063 752 YMPNGNLFQALHKRVKE---GKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 752 ~~~~gsL~~~l~~~~~~---~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
|+++|+|.+++...... ....+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||.+..
T Consensus 94 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 170 (303)
T 2vwi_A 94 LLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAF 170 (303)
T ss_dssp CCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCHHHHH
T ss_pred hccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCCChhhEEEcCCCCEEEEeccchhe
Confidence 99999999999753222 2345899999999999999999999 78999999999999999999999999999876
Q ss_pred ccCCCCc---ccccccCccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccccc
Q 002063 829 AENSPKV---SDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHEN 904 (973)
Q Consensus 829 ~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 904 (973)
....... .......||+.|+|||++.+ ..++.++||||+|+++|||++|+.||..... ..... .........
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~--~~~~~~~~~ 246 (303)
T 2vwi_A 171 LATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPP--MKVLM--LTLQNDPPS 246 (303)
T ss_dssp CC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCG--GGHHH--HHHTSSCCC
T ss_pred eccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCch--hhHHH--HHhccCCCc
Confidence 6433211 11223568999999999875 5689999999999999999999999975421 11111 111111110
Q ss_pred chh-hccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 905 VLK-VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 905 ~~~-~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
... ..+... .......+.+++.+||+.||.+||++.|++++
T Consensus 247 ~~~~~~~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 247 LETGVQDKEM----LKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp TTC-----CC----CCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred cccccccchh----hhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 000 001111 11223468899999999999999999999986
No 257
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=1e-36 Score=342.56 Aligned_cols=272 Identities=22% Similarity=0.258 Sum_probs=193.5
Q ss_pred HHHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCe-----
Q 002063 672 AEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIRHRNILKLYACLLKGGS----- 745 (973)
Q Consensus 672 ~~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~----- 745 (973)
...+++|++.+.||+|+||+||+|++..+++.||||++... .......+|++.++.++||||+++++++...+.
T Consensus 19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 98 (360)
T 3e3p_A 19 RKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRD 98 (360)
T ss_dssp HHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTC
T ss_pred hhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccc
Confidence 46678999999999999999999999999999999988653 334456788888999999999999999876433
Q ss_pred --eEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecC-CCceEEec
Q 002063 746 --SFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE-DYEPKIAD 822 (973)
Q Consensus 746 --~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~-~~~~kl~D 822 (973)
.++||||+++ +|.+.+... ......+++..+..++.|++.|++|||.+ +.+|+||||||+||+++. ++.+||+|
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~~~-~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~~~ivH~Dlkp~NIll~~~~~~~kl~D 175 (360)
T 3e3p_A 99 IYLNVVMEYVPD-TLHRCCRNY-YRRQVAPPPILIKVFLFQLIRSIGCLHLP-SVNVCHRDIKPHNVLVNEADGTLKLCD 175 (360)
T ss_dssp EEEEEEEECCSC-BHHHHHHHH-HTTTCCCCHHHHHHHHHHHHHHHHHHTST-TTCCBCSCCCGGGEEEETTTTEEEECC
T ss_pred eeEEEEeecccc-cHHHHHHHH-hhcccCCCHHHHHHHHHHHHHHHHHHhCC-CCCeecCcCCHHHEEEeCCCCcEEEee
Confidence 7899999975 666655543 23445678899999999999999999943 579999999999999997 89999999
Q ss_pred ccCCccccCCCCcccccccCcccccccccccccCC-CCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcc
Q 002063 823 FGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCK-VSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNN 901 (973)
Q Consensus 823 fgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~ 901 (973)
||+++....... .....||+.|+|||++.+.. ++.++|||||||++|||++|+.||..... ..............
T Consensus 176 fg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~-~~~~~~~~~~~~~~ 251 (360)
T 3e3p_A 176 FGSAKKLSPSEP---NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNS-AGQLHEIVRVLGCP 251 (360)
T ss_dssp CTTCBCCCTTSC---CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCCC
T ss_pred CCCceecCCCCC---cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCCh-HHHHHHHHHHcCCC
Confidence 999987654322 23356899999999986654 89999999999999999999999975421 11111111110000
Q ss_pred cccch----------hhccccc------cChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 902 HENVL----------KVLDCEV------ASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 902 ~~~~~----------~~~~~~~------~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
..... ...+... ...........+.+++.+||+.||.+|||+.|+++|-
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp 316 (360)
T 3e3p_A 252 SREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHP 316 (360)
T ss_dssp CHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSG
T ss_pred CHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCc
Confidence 00000 0000000 0011112456789999999999999999999999873
No 258
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=2.4e-36 Score=343.29 Aligned_cols=348 Identities=16% Similarity=0.170 Sum_probs=224.2
Q ss_pred ccCCCCCCCCCCCcceeeeCCCCCceEEEeecCCCCCccccccccCCCCCcEEeCCCCcccCccCccccCCCCCcEEEec
Q 002063 50 LDSWKESADSPCGFSGITCDSVTGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVT 129 (973)
Q Consensus 50 l~~W~~~~~~~c~w~gv~C~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~ 129 (973)
+++|....+|||.|.+..|.... +.+............-..++++++|++++|.++...+..|..+++|++|+|+
T Consensus 3 ~~~~~~~~~C~~~~~~~~c~~~~-----~~i~~~~~~~~~~~~~~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~ 77 (390)
T 3o6n_A 3 VKPRQPEYKCIDSNLQYDCVFYD-----VHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLN 77 (390)
T ss_dssp ----CCEECBCC------EEEES-----CEECSSCCCCEESCSSGGGCCCSEEEEESCEESEECTHHHHHCCCCSEEECT
T ss_pred cCCCCCccceehhhhhhccceee-----eeeecccccccccccccccCCceEEEecCCchhhCChhHhcccccCcEEECC
Confidence 68899887776766666663211 2222222222222223457899999999999885444457899999999999
Q ss_pred CCcccCCCC-CcCCCCCCCEEeccCcccCCccccccccccccceEEccCCcCCCCCCccc-ccCCCCCCEEEcccccCCC
Q 002063 130 GNAMVGSVP-DLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPES-IGNLKNLTYLFLAHCNLRG 207 (973)
Q Consensus 130 ~n~l~~~~~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~-~~~l~~L~~L~L~~n~l~~ 207 (973)
+|.+.+.++ .|+.+++|++|+|++|.+++..|..|.++++|++|++++|.++ .+|.. ++++++|++|++++|++++
T Consensus 78 ~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~--~l~~~~~~~l~~L~~L~L~~n~l~~ 155 (390)
T 3o6n_A 78 DLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS--SLPRGIFHNTPKLTTLSMSNNNLER 155 (390)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC--CCCTTTTTTCTTCCEEECCSSCCCB
T ss_pred CCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccC--cCCHHHhcCCCCCcEEECCCCccCc
Confidence 999988776 6899999999999999999888888889999999999999887 45555 5788889999999888888
Q ss_pred CCChhhhccCCCCeeeccccccccccchhhhccccccEEEeecccCCCCCCccccccccccEEEeeccccccccCCccCC
Q 002063 208 RIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGN 287 (973)
Q Consensus 208 ~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~ 287 (973)
..|..+..+++|++|++++|++++. .+..+++|++|++++|.+++ +...++|++|++++|.+... |...
T Consensus 156 ~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~-----~~~~~~L~~L~l~~n~l~~~-~~~~-- 224 (390)
T 3o6n_A 156 IEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHNSINVV-RGPV-- 224 (390)
T ss_dssp CCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSE-----EECCSSCSEEECCSSCCCEE-ECCC--
T ss_pred cChhhccCCCCCCEEECCCCcCCcc---ccccccccceeecccccccc-----cCCCCcceEEECCCCeeeec-cccc--
Confidence 7788888888888888888888754 35667788888888887773 23345777888888877643 3322
Q ss_pred CCCccEEEcccCCCCCCCCCCcCCccccceeeccccccCCCCCccccccccccccccccccccccCChhhhhhhhHHHHH
Q 002063 288 LKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLL 367 (973)
Q Consensus 288 l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll 367 (973)
.++|+.|++++|++++. ..+..+++|+.|++++|.+++..|..+..+++|+.|+|++|++++
T Consensus 225 ~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~---------------- 286 (390)
T 3o6n_A 225 NVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA---------------- 286 (390)
T ss_dssp CSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE----------------
T ss_pred cccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc----------------
Confidence 35667777777766643 345555555555555555555555555555555555555555541
Q ss_pred hhhccCCCCCCCcccCccccceEecccccccccCCccccCCCCcceEeccCCcCCCCCCCccCCCCCCCEEEcccCCCCC
Q 002063 368 ALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSG 447 (973)
Q Consensus 368 ~l~nn~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~ 447 (973)
+|..+..+++|++|+|++|+++ .+|..+. .+++|++|+|++|+++.
T Consensus 287 ---------~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~------------------------~l~~L~~L~L~~N~i~~ 332 (390)
T 3o6n_A 287 ---------LNLYGQPIPTLKVLDLSHNHLL-HVERNQP------------------------QFDRLENLYLDHNSIVT 332 (390)
T ss_dssp ---------EECSSSCCTTCCEEECCSSCCC-CCGGGHH------------------------HHTTCSEEECCSSCCCC
T ss_pred ---------cCcccCCCCCCCEEECCCCcce-ecCcccc------------------------ccCcCCEEECCCCccce
Confidence 1222334445555555555554 2333343 44555555555555553
Q ss_pred CCChhhhcCCCCCEEecCCCcCC
Q 002063 448 ELPSELGRLTNLERLILTNNNFS 470 (973)
Q Consensus 448 ~~p~~~~~l~~L~~L~L~~N~l~ 470 (973)
. + +..+++|+.|++++|.++
T Consensus 333 ~-~--~~~~~~L~~L~l~~N~~~ 352 (390)
T 3o6n_A 333 L-K--LSTHHTLKNLTLSHNDWD 352 (390)
T ss_dssp C-C--CCTTCCCSEEECCSSCEE
T ss_pred e-C--chhhccCCEEEcCCCCcc
Confidence 2 2 445556666666666665
No 259
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=2.4e-36 Score=336.51 Aligned_cols=263 Identities=22% Similarity=0.278 Sum_probs=204.6
Q ss_pred HHhcCCcccCeecccCcEEEEEEEE-cCCCceEEEEEeecc-ccHHHHHHHHHHHHhcCCCc------eeeEeEEEEeCC
Q 002063 673 EQICNLEEDNLIGSGGTGKVYRLDL-KKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIRHRN------ILKLYACLLKGG 744 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~Vy~a~~-~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hpn------iv~l~~~~~~~~ 744 (973)
...++|++.+.||+|+||+||+|.+ ..+++.||||++... ...+.+.+|+++++.++|++ ++++++++..++
T Consensus 11 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~ 90 (339)
T 1z57_A 11 VLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHG 90 (339)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETT
T ss_pred CccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCC
Confidence 3456899999999999999999998 557889999998753 34567889999999987664 999999999999
Q ss_pred eeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecC----------
Q 002063 745 SSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE---------- 814 (973)
Q Consensus 745 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~---------- 814 (973)
..++||||+ +++|.+++... ....+++..+..++.|++.||+||| +++|+||||||+||+++.
T Consensus 91 ~~~lv~e~~-~~~l~~~l~~~---~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~~~ 163 (339)
T 1z57_A 91 HICIVFELL-GLSTYDFIKEN---GFLPFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKPENILFVQSDYTEAYNPK 163 (339)
T ss_dssp EEEEEEECC-CCBHHHHHHHT---TTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCCCEEEEEC--
T ss_pred cEEEEEcCC-CCCHHHHHHhc---CCCCCcHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeccccccccCCc
Confidence 999999999 89999999764 3345789999999999999999999 789999999999999987
Q ss_pred ---------CCceEEecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCccc
Q 002063 815 ---------DYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEY 885 (973)
Q Consensus 815 ---------~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~ 885 (973)
++.+||+|||+++..... .....||+.|+|||++.+..++.++||||+||++|||++|+.||....
T Consensus 164 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 238 (339)
T 1z57_A 164 IKRDERTLINPDIKVVDFGSATYDDEH-----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHD 238 (339)
T ss_dssp --CEEEEESCCCEEECCCSSCEETTSC-----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSC
T ss_pred cccccccccCCCceEeeCcccccCccc-----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC
Confidence 668999999999865432 223568999999999999999999999999999999999999997542
Q ss_pred CCCccHHHHHHHhhccccc-c------hhhc-----c----------------c-cccChhhHHHHHHHHHHHHHhcCCC
Q 002063 886 GDGKDIVYWVSTHLNNHEN-V------LKVL-----D----------------C-EVASESIKEDMIKLLKIAVVCTTKL 936 (973)
Q Consensus 886 ~~~~~~~~~~~~~~~~~~~-~------~~~~-----~----------------~-~~~~~~~~~~~~~l~~l~~~cl~~d 936 (973)
.......+.......+. . .... + . .............+.+++.+||+.|
T Consensus 239 --~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d 316 (339)
T 1z57_A 239 --SKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYD 316 (339)
T ss_dssp --HHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSS
T ss_pred --hHHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcC
Confidence 11111111111110000 0 0000 0 0 0000112244667899999999999
Q ss_pred CCCCCCHHHHHHH
Q 002063 937 PNLRPPMREVVKM 949 (973)
Q Consensus 937 P~~Rpt~~evl~~ 949 (973)
|.+|||+.|++++
T Consensus 317 P~~Rpt~~ell~h 329 (339)
T 1z57_A 317 PAKRITLREALKH 329 (339)
T ss_dssp TTTSCCHHHHTTS
T ss_pred cccccCHHHHhcC
Confidence 9999999999876
No 260
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=6.5e-37 Score=339.19 Aligned_cols=257 Identities=26% Similarity=0.328 Sum_probs=182.0
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc---cHHHHHHHHH-HHHhcCCCceeeEeEEEEeCCeeEEEE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD---GVKVFAAEME-ILGKIRHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~E~~-~l~~l~hpniv~l~~~~~~~~~~~lv~ 750 (973)
.++|++.+.||+|+||+||+|.+..+++.||||++.... ...++.+|+. +++.++||||+++++++..++..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 467899999999999999999999899999999987632 2334555665 677789999999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCC-CeEecCCCCCCeeecCCCceEEecccCCccc
Q 002063 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSP-PIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~-~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
||++ |+|.+++..........+++..+..++.|++.||+||| +. +++||||||+||+++.++.+||+|||+++..
T Consensus 101 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 176 (327)
T 3aln_A 101 ELMS-TSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK---ENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQL 176 (327)
T ss_dssp CCCS-EEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHH---HHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred eecC-CChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHh---ccCCEeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence 9997 58888887543334567899999999999999999999 66 9999999999999999999999999999766
Q ss_pred cCCCCcccccccCccccccccccc----ccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccc
Q 002063 830 ENSPKVSDYSCFAGTHGYIAPELA----YTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENV 905 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 905 (973)
..... .....||+.|+|||++ .+..++.++|||||||++|||++|+.||........ ........
T Consensus 177 ~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----~~~~~~~~---- 245 (327)
T 3aln_A 177 VDSIA---KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD----QLTQVVKG---- 245 (327)
T ss_dssp --------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-----------CCCCCS----
T ss_pred ccccc---cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH----HHHHHhcC----
Confidence 43321 2234689999999998 466789999999999999999999999975311100 00000000
Q ss_pred hhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 906 LKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
..+.............+.+++.+||+.||++||++.+++++
T Consensus 246 ---~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 246 ---DPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp ---CCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred ---CCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 00111111112234568899999999999999999999874
No 261
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=1.1e-36 Score=333.53 Aligned_cols=255 Identities=25% Similarity=0.411 Sum_probs=195.6
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-ccHHHHHHHHHHHHhcCCCceeeEeEEEEe----------
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIRHRNILKLYACLLK---------- 742 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~---------- 742 (973)
..++|++.+.||+|+||+||+|++..+++.||||++... ...+.+.+|++++++++||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 346789999999999999999999988999999998653 445678899999999999999999998865
Q ss_pred ---CCeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceE
Q 002063 743 ---GGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPK 819 (973)
Q Consensus 743 ---~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~k 819 (973)
+...|+||||+++|+|.+++... ...+++..+..++.|+++||+||| +.+++||||||+||+++.++.+|
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dlkp~Nil~~~~~~~k 156 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSE----NLNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVK 156 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHS----CGGGCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEE
T ss_pred cccCCceEEEEecCCCCCHHHhhhcc----ccccchHHHHHHHHHHHHHHHHHH---hCCeecccCCHHhEEEcCCCCEE
Confidence 35679999999999999999853 345788899999999999999999 77999999999999999999999
Q ss_pred EecccCCccccCCCC------------cccccccCcccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccC
Q 002063 820 IADFGVAKIAENSPK------------VSDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEEYG 886 (973)
Q Consensus 820 l~Dfgl~~~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~ell~g~~pf~~~~~ 886 (973)
|+|||.+........ ........||+.|+|||++.+. .++.++||||+||++|||++ ||....
T Consensus 157 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~- 232 (303)
T 1zy4_A 157 IGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM- 232 (303)
T ss_dssp ECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH-
T ss_pred EeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch-
Confidence 999999986543211 1122345689999999998764 68999999999999999998 554321
Q ss_pred CCccHHHHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 887 DGKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 887 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
+............. .............+.+++.+||+.||.+|||+.+++++-
T Consensus 233 ---~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~ 285 (303)
T 1zy4_A 233 ---ERVNILKKLRSVSI--------EFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSG 285 (303)
T ss_dssp ---HHHHHHHHHHSTTC--------CCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSS
T ss_pred ---hHHHHHHhcccccc--------ccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCC
Confidence 11111111111111 111112223345678899999999999999999999864
No 262
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=1.5e-36 Score=341.87 Aligned_cols=259 Identities=22% Similarity=0.284 Sum_probs=196.9
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCee----
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSS---- 746 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~---- 746 (973)
.++|.+.+.||+|+||+||+|++..+++.||||++... ...+.+.+|+++++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 35889999999999999999999999999999998753 2346688999999999999999999999876654
Q ss_pred --EEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEeccc
Q 002063 747 --FLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFG 824 (973)
Q Consensus 747 --~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 824 (973)
|+||||++ ++|.+++. ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||
T Consensus 121 ~~~lv~e~~~-~~l~~~~~-------~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kL~Dfg 189 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMG-------MEFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFG 189 (371)
T ss_dssp CCEEEEECCC-EEHHHHTT-------SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECSTT
T ss_pred eEEEEEcccc-ccHHHHhh-------cCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCcCHHHeEECCCCCEEEEecC
Confidence 99999996 68877663 23889999999999999999999 7899999999999999999999999999
Q ss_pred CCccccCCCCcccccccCccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccc-
Q 002063 825 VAKIAENSPKVSDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNH- 902 (973)
Q Consensus 825 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~- 902 (973)
+++..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||.... ..+....+.......
T Consensus 190 ~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~--~~~~~~~i~~~~~~~~ 262 (371)
T 4exu_A 190 LARHADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD--YLDQLTQILKVTGVPG 262 (371)
T ss_dssp CC-------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCCCC
T ss_pred cccccccC-----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHHHHhCCCc
Confidence 99865432 223568999999999877 678999999999999999999999997531 111111110000000
Q ss_pred ccch------------hhccccccC---hhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 903 ENVL------------KVLDCEVAS---ESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 903 ~~~~------------~~~~~~~~~---~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
.... +........ .........+.+++.+||+.||++|||+.|++++-.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 326 (371)
T 4exu_A 263 TEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPF 326 (371)
T ss_dssp HHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGG
T ss_pred HHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcc
Confidence 0000 000000000 001123567889999999999999999999998743
No 263
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=2.2e-36 Score=328.21 Aligned_cols=253 Identities=27% Similarity=0.351 Sum_probs=204.5
Q ss_pred HHHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeE
Q 002063 672 AEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSF 747 (973)
Q Consensus 672 ~~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 747 (973)
....++|++.+.||+|+||+||+|++..+++.||||++... ...+.+.+|++++++++||||+++++++..++..+
T Consensus 18 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 97 (287)
T 2wei_A 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFY 97 (287)
T ss_dssp HHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred HHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEE
Confidence 34567899999999999999999999988999999998652 35678899999999999999999999999999999
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCC---CceEEeccc
Q 002063 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDED---YEPKIADFG 824 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~---~~~kl~Dfg 824 (973)
+||||+++++|.+++... ..+++..+..++.|++.||+||| +.+++||||||+||+++.+ +.+||+|||
T Consensus 98 lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg 169 (287)
T 2wei_A 98 IVGELYTGGELFDEIIKR-----KRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFG 169 (287)
T ss_dssp EEECCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECSTT
T ss_pred EEEEccCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChhhEEEecCCCcccEEEeccC
Confidence 999999999999998754 25789999999999999999999 7899999999999999754 469999999
Q ss_pred CCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccccc
Q 002063 825 VAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHEN 904 (973)
Q Consensus 825 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 904 (973)
++........ .....|++.|+|||++.+ .++.++||||+|+++|+|++|+.||.... .. ............
T Consensus 170 ~~~~~~~~~~---~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~--~~---~~~~~~~~~~~~ 240 (287)
T 2wei_A 170 LSTCFQQNTK---MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN--EY---DILKRVETGKYA 240 (287)
T ss_dssp GGGTBCCCSS---CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSS--HH---HHHHHHHHCCCC
T ss_pred cceeecCCCc---cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCC--HH---HHHHHHHcCCCC
Confidence 9986644322 223457899999999865 48999999999999999999999997541 11 111111111100
Q ss_pred chhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 905 VLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
............+.+++.+|++.||++|||+.|++++
T Consensus 241 --------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 241 --------FDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp --------CCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred --------CCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 0001112234568899999999999999999999985
No 264
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=3.6e-36 Score=360.69 Aligned_cols=334 Identities=18% Similarity=0.181 Sum_probs=236.5
Q ss_pred CCCCEEEcccccCCCCCChhhhccCCCCeeeccccccccccchhhhccccccEEEeecccCCCCCCccccccccccEEEe
Q 002063 193 KNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDI 272 (973)
Q Consensus 193 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L 272 (973)
.+++.|++++|.++...+..+..+++|++|+|++|.|++..|..|+.+++|++|+|++|.+++..|..|+++++|++|+|
T Consensus 51 ~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 130 (597)
T 3oja_B 51 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 130 (597)
T ss_dssp CCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEe
Confidence 45666666666666555555666677777777777766655566666666666666666666666666666777777777
Q ss_pred eccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCccccceeeccccccCCCCCcccccccccccccccccccccc
Q 002063 273 SSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGS 352 (973)
Q Consensus 273 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~ 352 (973)
++|.+++..+..|+++++|++|++++|.+++..|..|+.+++|+.|++++|.+++.. ++.+++|+.|++++|.+++
T Consensus 131 ~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~- 206 (597)
T 3oja_B 131 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLST- 206 (597)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSE-
T ss_pred eCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCcccc-
Confidence 777766444444566666666666666666666666666666666666666665431 3445556666666665542
Q ss_pred CChhhhhhhhHHHHHhhhccCCCCCCCcccCccccceEecccccccccCCccccCCCCcceEeccCCcCCCCCCCccCCC
Q 002063 353 FPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLS 432 (973)
Q Consensus 353 ~p~~~~~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~ 432 (973)
+...++|+.|++++|.+. ...... .
T Consensus 207 ----------------------------l~~~~~L~~L~ls~n~l~------------------------~~~~~~---~ 231 (597)
T 3oja_B 207 ----------------------------LAIPIAVEELDASHNSIN------------------------VVRGPV---N 231 (597)
T ss_dssp ----------------------------EECCTTCSEEECCSSCCC------------------------EEECSC---C
T ss_pred ----------------------------ccCCchhheeeccCCccc------------------------cccccc---C
Confidence 111234555555555554 222211 2
Q ss_pred CCCCEEEcccCCCCCCCChhhhcCCCCCEEecCCCcCCCCccccccccccCCEEEccCcccccCCCccccCccccchhhc
Q 002063 433 TSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNL 512 (973)
Q Consensus 433 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 512 (973)
++|+.|+|++|.+++ +..+..+++|+.|+|++|.+++.+|..|..+++|+.|+|++|++++ +|..+..+++|+.|+|
T Consensus 232 ~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L 308 (597)
T 3oja_B 232 VELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDL 308 (597)
T ss_dssp SCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEEC
T ss_pred CCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEEC
Confidence 568888888888875 4678888999999999999988888889999999999999999986 5667778899999999
Q ss_pred cccccccCCCccccccCCCCeeecCCCccCCCCCchhhccc-CceEEccCCccccccCcccccCCCCccccCCCCCccCc
Q 002063 513 ARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLK-LSSIDLSENQLSGSVPLDFLRMGGDGAFAGNEGLCLDQ 591 (973)
Q Consensus 513 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~n~~lc~~~ 591 (973)
++|.++ .+|..+..+++|+.|+|++|+|++. | +..++ |+.|+|++|+|+|.+...+........+.+++..|+.+
T Consensus 309 s~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~-~--~~~~~~L~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 384 (597)
T 3oja_B 309 SHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCNSLRALFRNVARPAVDDADQHCKID 384 (597)
T ss_dssp CSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHHHHHHHTTTCCTTTBCCCCCCCCTT
T ss_pred CCCCCC-ccCcccccCCCCCEEECCCCCCCCc-C--hhhcCCCCEEEeeCCCCCChhHHHHHHHHhhhccccccccCCcc
Confidence 999998 6788889999999999999999854 3 33444 99999999999999887655544446788999999875
Q ss_pred c
Q 002063 592 S 592 (973)
Q Consensus 592 ~ 592 (973)
.
T Consensus 385 ~ 385 (597)
T 3oja_B 385 Y 385 (597)
T ss_dssp C
T ss_pred h
Confidence 4
No 265
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.9e-36 Score=339.38 Aligned_cols=265 Identities=22% Similarity=0.283 Sum_probs=200.6
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeC-----Ce
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKG-----GS 745 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-----~~ 745 (973)
..++|++.+.||+|+||+||+|++..+++.||||++... .....+.+|++++++++||||+++++++..+ ..
T Consensus 9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 88 (353)
T 2b9h_A 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE 88 (353)
T ss_dssp SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence 346899999999999999999999999999999998653 2345678999999999999999999988654 67
Q ss_pred eEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccC
Q 002063 746 SFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGV 825 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl 825 (973)
.|+||||++ |+|.+++... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+
T Consensus 89 ~~lv~e~~~-~~L~~~~~~~------~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 158 (353)
T 2b9h_A 89 VYIIQELMQ-TDLHRVISTQ------MLSDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGL 158 (353)
T ss_dssp EEEEECCCS-EEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEEeccC-ccHHHHHhhc------CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEcCCCcEEEEeccc
Confidence 899999996 6999988752 5889999999999999999999 78999999999999999999999999999
Q ss_pred CccccCCCCcc--------cccccCccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHH
Q 002063 826 AKIAENSPKVS--------DYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVS 896 (973)
Q Consensus 826 ~~~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~ 896 (973)
++......... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.... .......+.
T Consensus 159 a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--~~~~~~~~~ 236 (353)
T 2b9h_A 159 ARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRD--YRHQLLLIF 236 (353)
T ss_dssp CEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHH
T ss_pred ccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCC--cHHHHHHHH
Confidence 98765322111 1223468999999998754 678999999999999999999999997542 111111111
Q ss_pred Hhhcccc---cc--------hhhcc------ccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 897 THLNNHE---NV--------LKVLD------CEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 897 ~~~~~~~---~~--------~~~~~------~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
....... .. .+... ..............+.+++.+||+.||++|||+.|++++-
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 307 (353)
T 2b9h_A 237 GIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHP 307 (353)
T ss_dssp HHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred HHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCc
Confidence 1100000 00 00000 0000001123345688999999999999999999999864
No 266
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=1e-36 Score=345.67 Aligned_cols=268 Identities=24% Similarity=0.321 Sum_probs=196.2
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHhcCCCceeeEeEEEEeCC------eeEE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYACLLKGG------SSFL 748 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~------~~~l 748 (973)
..+|++.+.||+|+||+||+|++..++ .||+|++..... ...+|+++++.++||||+++++++...+ ..++
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~-~~aikk~~~~~~--~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 115 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESD-EVAIKKVLQDKR--FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL 115 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTE-EEEEEEEECCTT--SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCC-eEEEEEEecCcc--hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence 457899999999999999999998755 488888765332 2247999999999999999999986543 2789
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeec-CCCceEEecccCCc
Q 002063 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLD-EDYEPKIADFGVAK 827 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~-~~~~~kl~Dfgl~~ 827 (973)
||||+++ ++.+.+.... .....+++..+..++.|+++||+||| +.+|+||||||+||+++ .++.+||+|||+++
T Consensus 116 v~e~~~~-~l~~~~~~~~-~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~ 190 (394)
T 4e7w_A 116 VLEYVPE-TVYRASRHYA-KLKQTMPMLLIKLYMYQLLRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAK 190 (394)
T ss_dssp EEECCSE-EHHHHHHHHH-HTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EeeccCc-cHHHHHHHHH-hhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEcCCCCcEEEeeCCCcc
Confidence 9999976 4444443321 23456889999999999999999999 78999999999999999 79999999999998
Q ss_pred cccCCCCcccccccCcccccccccccccC-CCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhc------
Q 002063 828 IAENSPKVSDYSCFAGTHGYIAPELAYTC-KVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLN------ 900 (973)
Q Consensus 828 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~------ 900 (973)
....... .....||+.|+|||++.+. .++.++||||+||++|||++|+.||..... .......+...-.
T Consensus 191 ~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~-~~~l~~i~~~~g~p~~~~~ 266 (394)
T 4e7w_A 191 ILIAGEP---NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESG-IDQLVEIIKVLGTPSREQI 266 (394)
T ss_dssp ECCTTCC---CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCCCCHHHH
T ss_pred cccCCCC---CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCHHHH
Confidence 7644322 2235689999999998765 589999999999999999999999975421 1111111110000
Q ss_pred --ccccchhhccccccCh-----hhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH--hhcCC
Q 002063 901 --NHENVLKVLDCEVASE-----SIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM--LADAD 954 (973)
Q Consensus 901 --~~~~~~~~~~~~~~~~-----~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~--L~~~~ 954 (973)
..........+..... ........+.+++.+||++||.+|||+.|+++| ++++.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 329 (394)
T 4e7w_A 267 KTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELR 329 (394)
T ss_dssp HHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTT
T ss_pred HhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhc
Confidence 0000000000000000 111234578899999999999999999999987 44443
No 267
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=3.2e-37 Score=344.91 Aligned_cols=264 Identities=19% Similarity=0.185 Sum_probs=204.3
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecccc-------------------HHHHHHHHHHHHhcCCCcee
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDG-------------------VKVFAAEMEILGKIRHRNIL 734 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~-------------------~~~~~~E~~~l~~l~hpniv 734 (973)
..++|++.+.||+|+||+||+|++ +++.||||++..... .+.+.+|++++++++||||+
T Consensus 29 ~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~ 106 (348)
T 2pml_X 29 YINDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCL 106 (348)
T ss_dssp EETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBC
T ss_pred ccCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcc
Confidence 356899999999999999999999 689999999875321 17899999999999999999
Q ss_pred eEeEEEEeCCeeEEEEEccCCCchHHHHHhh---hcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCC-CCeEecCCCCCCe
Q 002063 735 KLYACLLKGGSSFLVLEYMPNGNLFQALHKR---VKEGKPELDWFRRYKIALGAAKGIAYLHHDCS-PPIIHRDIKSSNI 810 (973)
Q Consensus 735 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~---~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~-~~ivH~Dlkp~Ni 810 (973)
++++++.+++..|+||||+++|+|.+++... .......+++..+..++.|++.||+||| + .+++||||||+||
T Consensus 107 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dl~p~Ni 183 (348)
T 2pml_X 107 TCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIH---NEKNICHRDVKPSNI 183 (348)
T ss_dssp CCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTSCEECCCCCGGGE
T ss_pred eEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHh---ccCCEeecCCChHhE
Confidence 9999999999999999999999999883211 0112456899999999999999999999 5 8999999999999
Q ss_pred eecCCCceEEecccCCccccCCCCcccccccCcccccccccccccC-CCCc-cchHHHHHHHHHHHHhCCCCCCcccCCC
Q 002063 811 LLDEDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTC-KVSE-KSDVFSFGVVLLELVTGRKPVEEEYGDG 888 (973)
Q Consensus 811 ll~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~DvwslG~~l~ell~g~~pf~~~~~~~ 888 (973)
+++.++.+||+|||.+...... ......|+..|+|||++.+. .++. ++||||+|+++|||++|+.||......
T Consensus 184 l~~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~- 258 (348)
T 2pml_X 184 LMDKNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL- 258 (348)
T ss_dssp EECTTSCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS-
T ss_pred EEcCCCcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH-
Confidence 9999999999999999866433 22345689999999999877 6666 999999999999999999999754221
Q ss_pred ccHHHHHHHhhcccccchh----hccc---cccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 889 KDIVYWVSTHLNNHENVLK----VLDC---EVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 889 ~~~~~~~~~~~~~~~~~~~----~~~~---~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
.. .............. .... .............+.+++.+||+.||.+||++.|++++-
T Consensus 259 ~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp 324 (348)
T 2pml_X 259 VE---LFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHE 324 (348)
T ss_dssp HH---HHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSG
T ss_pred HH---HHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCc
Confidence 11 11111111110000 0000 000000123345788999999999999999999999853
No 268
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=3.4e-36 Score=333.33 Aligned_cols=269 Identities=21% Similarity=0.258 Sum_probs=203.3
Q ss_pred HhcCCcccCeecccCcEEEEEEEEc-CCCceEEEEEeeccc----cHHHHHHHHHHHHhc---CCCceeeEeEEEE----
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLK-KNAGTVAVKQLWKGD----GVKVFAAEMEILGKI---RHRNILKLYACLL---- 741 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~-~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l---~hpniv~l~~~~~---- 741 (973)
...+|++.+.||+|+||+||+|++. .+++.||||++.... ....+.+|+++++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 3468999999999999999999995 668899999886522 223566788887766 8999999999987
Q ss_pred -eCCeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEE
Q 002063 742 -KGGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKI 820 (973)
Q Consensus 742 -~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl 820 (973)
.....++||||++ |+|.+++... ....+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~---~~~~~~~~~~~~~~~qi~~~l~~lH---~~gi~H~dlkp~Nili~~~~~~kl 161 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKV---PEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKL 161 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHS---CTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEE
T ss_pred CCCceEEEEEecCC-CCHHHHHHhc---ccCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHHHeEEcCCCCEEE
Confidence 4567899999997 6999999864 2345889999999999999999999 789999999999999999999999
Q ss_pred ecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhc
Q 002063 821 ADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLN 900 (973)
Q Consensus 821 ~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~ 900 (973)
+|||+++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..+....+.....
T Consensus 162 ~Dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--~~~~~~~i~~~~~ 236 (326)
T 1blx_A 162 ADFGLARIYSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS--DVDQLGKILDVIG 236 (326)
T ss_dssp CSCCSCCCCCGG---GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHC
T ss_pred ecCcccccccCC---CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCC--HHHHHHHHHHHcC
Confidence 999999765432 22334568999999999999999999999999999999999999997542 1111111111110
Q ss_pred cc--ccchh-------hcc---ccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH--hhcCC
Q 002063 901 NH--ENVLK-------VLD---CEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM--LADAD 954 (973)
Q Consensus 901 ~~--~~~~~-------~~~---~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~--L~~~~ 954 (973)
.. ..... .+. ..............+.+++.+||+.||++||++.|++++ +.+..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~ 304 (326)
T 1blx_A 237 LPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLE 304 (326)
T ss_dssp CCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred CCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCccccccc
Confidence 00 00000 000 000011112334568899999999999999999999976 44443
No 269
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=9.2e-36 Score=334.08 Aligned_cols=265 Identities=18% Similarity=0.222 Sum_probs=204.1
Q ss_pred CHHHhcCCcccCeecccCcEEEEEEEEcCCC-ceEEEEEeecc-ccHHHHHHHHHHHHhcCCCc------eeeEeEEEEe
Q 002063 671 DAEQICNLEEDNLIGSGGTGKVYRLDLKKNA-GTVAVKQLWKG-DGVKVFAAEMEILGKIRHRN------ILKLYACLLK 742 (973)
Q Consensus 671 ~~~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~-~~vavK~~~~~-~~~~~~~~E~~~l~~l~hpn------iv~l~~~~~~ 742 (973)
+....++|++.+.||+|+||+||+|++..++ +.||||++... ...+.+.+|++++++++|++ ++.+++++..
T Consensus 14 g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~ 93 (355)
T 2eu9_A 14 GDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNF 93 (355)
T ss_dssp TCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEE
T ss_pred CceecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeee
Confidence 3344578999999999999999999998766 68999998763 34566788999999998766 9999999999
Q ss_pred CCeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeee----------
Q 002063 743 GGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILL---------- 812 (973)
Q Consensus 743 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill---------- 812 (973)
.+..++||||+ ++++.+++... ....+++..+..++.|++.||+||| +.+|+||||||+||++
T Consensus 94 ~~~~~lv~e~~-~~~l~~~l~~~---~~~~~~~~~~~~i~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~ 166 (355)
T 2eu9_A 94 HGHMCIAFELL-GKNTFEFLKEN---NFQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYN 166 (355)
T ss_dssp TTEEEEEEECC-CCBHHHHHHHT---TTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEESCCCEEEEEC
T ss_pred CCeEEEEEecc-CCChHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeccccccccc
Confidence 99999999999 67787877653 2345889999999999999999999 8899999999999999
Q ss_pred ---------cCCCceEEecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCc
Q 002063 813 ---------DEDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEE 883 (973)
Q Consensus 813 ---------~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~ 883 (973)
+.++.+||+|||+++..... .....||+.|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 167 ~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 241 (355)
T 2eu9_A 167 EHKSCEEKSVKNTSIRVADFGSATFDHEH-----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQT 241 (355)
T ss_dssp CC-CCCEEEESCCCEEECCCTTCEETTSC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred ccccccccccCCCcEEEeecCcccccccc-----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCC
Confidence 56789999999999864332 2235689999999999999999999999999999999999999975
Q ss_pred ccCCCccHHHHHHHhhccccc-c------hhh-cccc---------------------ccChhhHHHHHHHHHHHHHhcC
Q 002063 884 EYGDGKDIVYWVSTHLNNHEN-V------LKV-LDCE---------------------VASESIKEDMIKLLKIAVVCTT 934 (973)
Q Consensus 884 ~~~~~~~~~~~~~~~~~~~~~-~------~~~-~~~~---------------------~~~~~~~~~~~~l~~l~~~cl~ 934 (973)
.. .......+.......+. . ... .... ............+.+++.+||+
T Consensus 242 ~~--~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~ 319 (355)
T 2eu9_A 242 HE--NREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLE 319 (355)
T ss_dssp SS--HHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTC
T ss_pred CC--HHHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhc
Confidence 42 11111111111110000 0 000 0000 0001112335578899999999
Q ss_pred CCCCCCCCHHHHHHH
Q 002063 935 KLPNLRPPMREVVKM 949 (973)
Q Consensus 935 ~dP~~Rpt~~evl~~ 949 (973)
.||++|||+.|++++
T Consensus 320 ~dP~~Rpt~~e~l~h 334 (355)
T 2eu9_A 320 FDPAQRITLAEALLH 334 (355)
T ss_dssp SSTTTSCCHHHHTTS
T ss_pred CChhhCcCHHHHhcC
Confidence 999999999999975
No 270
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=1.4e-36 Score=334.25 Aligned_cols=252 Identities=23% Similarity=0.324 Sum_probs=193.8
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcC--CCceeeEeEEEEeCCeeEE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIR--HRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~--hpniv~l~~~~~~~~~~~l 748 (973)
..+|++.+.||+|+||+||+|++.. ++.||||++... ...+.+.+|++++++++ ||||+++++++..++..|+
T Consensus 27 ~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 105 (313)
T 3cek_A 27 GRIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 105 (313)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEE
T ss_pred cceEEEEEEecCCCCEEEEEEEcCC-CcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEE
Confidence 4578999999999999999999865 889999998652 24467889999999997 5999999999999999999
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcc
Q 002063 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||| +.+++|.+++... ..+++..+..++.|+++||+||| +.+|+||||||+||++++ +.+||+|||++..
T Consensus 106 v~e-~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~ 175 (313)
T 3cek_A 106 VME-CGNIDLNSWLKKK-----KSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIVD-GMLKLIDFGIANQ 175 (313)
T ss_dssp EEC-CCSEEHHHHHHHC-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEET-TEEEECCCSSSCC
T ss_pred EEe-cCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEEEC-CeEEEeecccccc
Confidence 999 5588999999853 35788999999999999999999 789999999999999965 8999999999987
Q ss_pred ccCCCCcccccccCccccccccccccc-----------CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHH
Q 002063 829 AENSPKVSDYSCFAGTHGYIAPELAYT-----------CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVST 897 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~ 897 (973)
..............||+.|+|||++.+ ..++.++||||||+++|||++|+.||..... .. .....
T Consensus 176 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~---~~-~~~~~ 251 (313)
T 3cek_A 176 MQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN---QI-SKLHA 251 (313)
T ss_dssp --------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCS---HH-HHHHH
T ss_pred ccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHH---HH-HHHHH
Confidence 654433222334568999999999865 4688899999999999999999999975321 11 11111
Q ss_pred hhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 898 HLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
.... ......+......+.+++.+||+.||.+||++.|++++-.
T Consensus 252 ~~~~----------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~ 295 (313)
T 3cek_A 252 IIDP----------NHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 295 (313)
T ss_dssp HHCT----------TSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred HHhc----------ccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcCcc
Confidence 1111 1100111111346788999999999999999999998644
No 271
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=1.8e-36 Score=336.27 Aligned_cols=258 Identities=20% Similarity=0.257 Sum_probs=177.7
Q ss_pred HHhcCCcccC-eecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHhcCCCceeeEeEEEEe----CCeeE
Q 002063 673 EQICNLEEDN-LIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYACLLK----GGSSF 747 (973)
Q Consensus 673 ~~~~~~~~~~-~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~----~~~~~ 747 (973)
...++|++.+ .||+|+||+||+|++..+++.||||++..... ...+....++.++||||+++++++.. +...+
T Consensus 25 ~~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 102 (336)
T 3fhr_A 25 AVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPK--ARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLL 102 (336)
T ss_dssp CGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHH--HHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHH--HHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEE
Confidence 3456888854 69999999999999999999999999865332 22233344667799999999999876 44589
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecC---CCceEEeccc
Q 002063 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE---DYEPKIADFG 824 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~---~~~~kl~Dfg 824 (973)
+||||+++|+|.+++... ....+++..+..++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||
T Consensus 103 lv~e~~~gg~L~~~l~~~---~~~~l~~~~~~~i~~ql~~~l~~LH---~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg 176 (336)
T 3fhr_A 103 IIMECMEGGELFSRIQER---GDQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFG 176 (336)
T ss_dssp EEEECCTTEEHHHHHHTC----CCCCBHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCT
T ss_pred EEEeccCCCCHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEEecCCCceEEEeccc
Confidence 999999999999999853 2346899999999999999999999 789999999999999986 4559999999
Q ss_pred CCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccccc
Q 002063 825 VAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHEN 904 (973)
Q Consensus 825 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 904 (973)
+++..... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||......... ...........
T Consensus 177 ~~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~--~~~~~~~~~~~- 249 (336)
T 3fhr_A 177 FAKETTQN----ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAIS--PGMKRRIRLGQ- 249 (336)
T ss_dssp TCEEC--------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-----------------------
T ss_pred cceecccc----ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhh--hhHHHhhhccc-
Confidence 99865432 122356899999999998888999999999999999999999999754221110 00000000000
Q ss_pred chhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 905 VLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
..............+.+++.+||+.||.+|||+.|++++-.
T Consensus 250 ------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 290 (336)
T 3fhr_A 250 ------YGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPW 290 (336)
T ss_dssp -------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHH
T ss_pred ------cccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcc
Confidence 00011111233456889999999999999999999998543
No 272
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.7e-36 Score=333.15 Aligned_cols=263 Identities=22% Similarity=0.295 Sum_probs=192.9
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc--ccHHHHHHHHHHHHhcCCCceeeEeEEEE-----------
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRHRNILKLYACLL----------- 741 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~----------- 741 (973)
.++|++.+.||+|+||+||+|++..+++.||||++... ...+.+.+|++++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 36789999999999999999999999999999988653 34567889999999999999999999873
Q ss_pred ---eCCeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeec-CCCc
Q 002063 742 ---KGGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLD-EDYE 817 (973)
Q Consensus 742 ---~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~-~~~~ 817 (973)
.....|+||||++ |+|.+++.. ..+++..+..++.|++.||+||| +.+|+||||||+||+++ +++.
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~ 159 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQ------GPLLEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANLFINTEDLV 159 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTT------CCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTTE
T ss_pred cccccCceeEEeeccC-CCHHHHhhc------CCccHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCe
Confidence 3467899999997 699998853 35788999999999999999999 78999999999999997 5679
Q ss_pred eEEecccCCccccCCCC-cccccccCccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHH
Q 002063 818 PKIADFGVAKIAENSPK-VSDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWV 895 (973)
Q Consensus 818 ~kl~Dfgl~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~ 895 (973)
+||+|||+++....... ........+|..|+|||++.+ ..++.++|||||||++|||++|+.||..... ......+
T Consensus 160 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~--~~~~~~~ 237 (320)
T 2i6l_A 160 LKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHE--LEQMQLI 237 (320)
T ss_dssp EEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHH
T ss_pred EEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCH--HHHHHHH
Confidence 99999999986643211 122233467899999998865 6789999999999999999999999975421 1111111
Q ss_pred HHhhcccc--cchh-------hccccc------cChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 896 STHLNNHE--NVLK-------VLDCEV------ASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 896 ~~~~~~~~--~~~~-------~~~~~~------~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
........ ...+ ...... ...........+.+++.+||+.||++||++.|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 238 LESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp HHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred HHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 10000000 0000 000000 000111235678899999999999999999999985
No 273
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=2.4e-36 Score=339.76 Aligned_cols=265 Identities=20% Similarity=0.238 Sum_probs=194.2
Q ss_pred HHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc-------------cHHHHHHHHHHHHhcCCCceeeEeEE
Q 002063 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-------------GVKVFAAEMEILGKIRHRNILKLYAC 739 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~-------------~~~~~~~E~~~l~~l~hpniv~l~~~ 739 (973)
...++|++.+.||+|+||+||+|.+.. ++.||||++.... ..+.+.+|++++++++||||++++++
T Consensus 19 ~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 97 (362)
T 3pg1_A 19 AMQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDI 97 (362)
T ss_dssp HTTCSCEEEEEEEEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEE
T ss_pred HhccceEEeEEeccCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeee
Confidence 445789999999999999999999876 8999999885421 13678999999999999999999999
Q ss_pred EEe-----CCeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecC
Q 002063 740 LLK-----GGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE 814 (973)
Q Consensus 740 ~~~-----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~ 814 (973)
+.. ....|+||||++ |+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.
T Consensus 98 ~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~ 169 (362)
T 3pg1_A 98 FVHFEEPAMHKLYLVTELMR-TDLAQVIHDQ----RIVISPQHIQYFMYHILLGLHVLH---EAGVVHRDLHPGNILLAD 169 (362)
T ss_dssp EEECCTTTCCEEEEEEECCS-EEHHHHHHCT----TSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECT
T ss_pred EEeccCCCcceEEEEEccCC-CCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHH---HCcCEecCCChHHEEEcC
Confidence 854 236799999997 6888888742 446899999999999999999999 789999999999999999
Q ss_pred CCceEEecccCCccccCCCCcccccccCccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHH
Q 002063 815 DYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVY 893 (973)
Q Consensus 815 ~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~ 893 (973)
++.+||+|||++....... ......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||.... ......
T Consensus 170 ~~~~kl~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~--~~~~~~ 244 (362)
T 3pg1_A 170 NNDITICDFNLAREDTADA---NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGST--FYNQLN 244 (362)
T ss_dssp TCCEEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHH
T ss_pred CCCEEEEecCccccccccc---ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCC--HHHHHH
Confidence 9999999999997543322 2233568999999999876 678999999999999999999999997541 111111
Q ss_pred HHHHhhcccc----------cchhhcc---cccc----ChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 894 WVSTHLNNHE----------NVLKVLD---CEVA----SESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 894 ~~~~~~~~~~----------~~~~~~~---~~~~----~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
.+........ ....... .... ..........+.+++.+||+.||.+|||+.|+++|-.
T Consensus 245 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 319 (362)
T 3pg1_A 245 KIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPY 319 (362)
T ss_dssp HHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGG
T ss_pred HHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCch
Confidence 1110000000 0000000 0000 0111122456889999999999999999999998743
No 274
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=9.1e-36 Score=336.57 Aligned_cols=264 Identities=21% Similarity=0.242 Sum_probs=202.2
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-ccHHHHHHHHHHHHhcC-----------CCceeeEeEEEEe
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIR-----------HRNILKLYACLLK 742 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~-----------hpniv~l~~~~~~ 742 (973)
..+|++.+.||+|+||+||+|++..+++.||||++... ...+.+.+|++++++++ ||||+++++++..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~ 97 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 97 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence 46899999999999999999999999999999998754 34566788999999886 8999999999876
Q ss_pred CC----eeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCC-CeEecCCCCCCeeecC---
Q 002063 743 GG----SSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSP-PIIHRDIKSSNILLDE--- 814 (973)
Q Consensus 743 ~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~-~ivH~Dlkp~Nill~~--- 814 (973)
.+ ..++||||+ +++|.+++... ....+++..+..++.|++.||+||| ++ +|+||||||+||+++.
T Consensus 98 ~~~~~~~~~lv~e~~-~~~L~~~~~~~---~~~~~~~~~~~~i~~qi~~aL~~lH---~~~~ivH~Dikp~NIll~~~~~ 170 (373)
T 1q8y_A 98 KGPNGVHVVMVFEVL-GENLLALIKKY---EHRGIPLIYVKQISKQLLLGLDYMH---RRCGIIHTDIKPENVLMEIVDS 170 (373)
T ss_dssp EETTEEEEEEEECCC-CEEHHHHHHHT---TTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECSCCSGGGEEEEEEET
T ss_pred cCCCCceEEEEEecC-CCCHHHHHHHh---hccCCcHHHHHHHHHHHHHHHHHHH---hcCCEEecCCChHHeEEeccCC
Confidence 54 789999999 89999999864 2345889999999999999999999 66 9999999999999953
Q ss_pred ---CCceEEecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCC---
Q 002063 815 ---DYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDG--- 888 (973)
Q Consensus 815 ---~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~--- 888 (973)
.+.+||+|||++...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 171 ~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~ 245 (373)
T 1q8y_A 171 PENLIQIKIADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTK 245 (373)
T ss_dssp TTTEEEEEECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------C
T ss_pred CcCcceEEEcccccccccCCC-----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCC
Confidence 447999999999866432 223468999999999999999999999999999999999999997643211
Q ss_pred --ccHHHHHHHhhcccc------------------cchhhcccc---------ccChhhHHHHHHHHHHHHHhcCCCCCC
Q 002063 889 --KDIVYWVSTHLNNHE------------------NVLKVLDCE---------VASESIKEDMIKLLKIAVVCTTKLPNL 939 (973)
Q Consensus 889 --~~~~~~~~~~~~~~~------------------~~~~~~~~~---------~~~~~~~~~~~~l~~l~~~cl~~dP~~ 939 (973)
........ .....+ ....+.... ............+.+++.+||+.||++
T Consensus 246 ~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~ 324 (373)
T 1q8y_A 246 DDDHIAQIIE-LLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRK 324 (373)
T ss_dssp HHHHHHHHHH-HHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTT
T ss_pred hHHHHHHHHH-hcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccc
Confidence 01111111 000000 000000000 001123566778999999999999999
Q ss_pred CCCHHHHHHHhh
Q 002063 940 RPPMREVVKMLA 951 (973)
Q Consensus 940 Rpt~~evl~~L~ 951 (973)
|||+.|+++|-.
T Consensus 325 Rpt~~ell~hp~ 336 (373)
T 1q8y_A 325 RADAGGLVNHPW 336 (373)
T ss_dssp CBCHHHHHTCGG
T ss_pred cCCHHHHhhChh
Confidence 999999998643
No 275
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=3.9e-37 Score=339.75 Aligned_cols=257 Identities=23% Similarity=0.319 Sum_probs=197.1
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEEE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLVL 750 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 750 (973)
.++|++.+.||+|+||+||+|++.. .||+|++... ...+.+.+|++++++++||||+++++++..++..++||
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~ 108 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIIT 108 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEEC
T ss_pred HHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEe
Confidence 4688999999999999999999864 5999988642 23455778999999999999999999999999999999
Q ss_pred EccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcccc
Q 002063 751 EYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAE 830 (973)
Q Consensus 751 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~ 830 (973)
||+++++|.+++... ...+++..+..++.|++.||+||| +.+++||||||+||+++ ++.+||+|||++....
T Consensus 109 e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~ 180 (319)
T 2y4i_B 109 SLCKGRTLYSVVRDA----KIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYD-NGKVVITDFGLFSISG 180 (319)
T ss_dssp BCCCSEEHHHHTTSS----CCCCCSHHHHHHHHHHHHHHHHHH---HTTCCCCCCCSTTEEEC---CCEECCCSCCC---
T ss_pred ecccCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChhhEEEe-CCCEEEeecCCccccc
Confidence 999999999998642 345888999999999999999999 78999999999999998 6799999999987553
Q ss_pred CCC---CcccccccCccccccccccccc---------CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHh
Q 002063 831 NSP---KVSDYSCFAGTHGYIAPELAYT---------CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTH 898 (973)
Q Consensus 831 ~~~---~~~~~~~~~gt~~y~aPE~~~~---------~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~ 898 (973)
... .........|++.|+|||++.+ ..++.++||||||+++|||++|+.||.... ........
T Consensus 181 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-----~~~~~~~~ 255 (319)
T 2y4i_B 181 VLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQP-----AEAIIWQM 255 (319)
T ss_dssp -------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCC-----HHHHHHHH
T ss_pred cccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHh
Confidence 221 1122233568999999999864 457889999999999999999999997531 11111111
Q ss_pred hcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCCC
Q 002063 899 LNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPCT 957 (973)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~ 957 (973)
..... +.... ......+.+++.+||+.||++||++.+++++|+++....
T Consensus 256 ~~~~~-------~~~~~---~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~ 304 (319)
T 2y4i_B 256 GTGMK-------PNLSQ---IGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN 304 (319)
T ss_dssp HTTCC-------CCCCC---SSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred ccCCC-------CCCCc---CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence 11100 00000 012235788999999999999999999999999987644
No 276
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=1.2e-36 Score=335.69 Aligned_cols=244 Identities=24% Similarity=0.340 Sum_probs=201.1
Q ss_pred HHHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc--------cHHHHHHHHHHHHhcC--CCceeeEeEEEE
Q 002063 672 AEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD--------GVKVFAAEMEILGKIR--HRNILKLYACLL 741 (973)
Q Consensus 672 ~~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~--------~~~~~~~E~~~l~~l~--hpniv~l~~~~~ 741 (973)
.....+|++.+.||+|+||+||+|++..+++.||||++.... ....+.+|++++++++ ||||+++++++.
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~ 118 (320)
T 3a99_A 39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE 118 (320)
T ss_dssp -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence 344568999999999999999999999999999999987632 2245678999999996 599999999999
Q ss_pred eCCeeEEEEEccCC-CchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeec-CCCceE
Q 002063 742 KGGSSFLVLEYMPN-GNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLD-EDYEPK 819 (973)
Q Consensus 742 ~~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~-~~~~~k 819 (973)
.++..++||||+.+ ++|.+++... ..+++..+..++.|+++||+||| +.+|+||||||+||+++ .++.+|
T Consensus 119 ~~~~~~lv~e~~~~~~~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~k 190 (320)
T 3a99_A 119 RPDSFVLILERPEPVQDLFDFITER-----GALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELK 190 (320)
T ss_dssp CSSEEEEEEECCSSEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEE
T ss_pred cCCcEEEEEEcCCCCccHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcEeCCCCHHHEEEeCCCCCEE
Confidence 99999999999976 8999999763 35789999999999999999999 78999999999999999 789999
Q ss_pred EecccCCccccCCCCcccccccCcccccccccccccCCC-CccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHh
Q 002063 820 IADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKV-SEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTH 898 (973)
Q Consensus 820 l~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~ 898 (973)
|+|||+++...... .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||.... ....
T Consensus 191 L~Dfg~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-------~~~~-- 257 (320)
T 3a99_A 191 LIDFGSGALLKDTV----YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-------EIIR-- 257 (320)
T ss_dssp ECCCTTCEECCSSC----BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------HHHH--
T ss_pred EeeCcccccccccc----ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh-------hhhc--
Confidence 99999998765432 223568999999999887766 678999999999999999999996531 0100
Q ss_pred hcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 899 LNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
.... . .......+.+++.+||+.||++||++.|++++-
T Consensus 258 --~~~~--------~----~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp 295 (320)
T 3a99_A 258 --GQVF--------F----RQRVSSECQHLIRWCLALRPSDRPTFEEIQNHP 295 (320)
T ss_dssp --CCCC--------C----SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSG
T ss_pred --cccc--------c----cccCCHHHHHHHHHHccCChhhCcCHHHHhcCH
Confidence 0000 0 011234678999999999999999999999864
No 277
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=5.8e-36 Score=335.18 Aligned_cols=257 Identities=21% Similarity=0.289 Sum_probs=195.8
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCe------
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----DGVKVFAAEMEILGKIRHRNILKLYACLLKGGS------ 745 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~------ 745 (973)
.+|.+.+.||+|+||+||+|++..+|+.||||++... ...+.+.+|+.++++++||||+++++++.....
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 5789999999999999999999999999999998653 234567899999999999999999999987653
Q ss_pred eEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccC
Q 002063 746 SFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGV 825 (973)
Q Consensus 746 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl 825 (973)
.|+||||++ |+|.+++. ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+
T Consensus 104 ~~lv~e~~~-~~l~~~~~-------~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~ 172 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMG-------LKFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGL 172 (353)
T ss_dssp CEEEEECCS-EEGGGTTT-------SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTCCEEECSTTC
T ss_pred EEEEecccc-CCHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEeECCCCcEEEeeccc
Confidence 499999996 68877653 24889999999999999999999 78999999999999999999999999999
Q ss_pred CccccCCCCcccccccCccccccccccccc-CCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccc-c
Q 002063 826 AKIAENSPKVSDYSCFAGTHGYIAPELAYT-CKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNH-E 903 (973)
Q Consensus 826 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~-~ 903 (973)
++..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||.... ..+....+....... .
T Consensus 173 ~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~--~~~~~~~i~~~~~~~~~ 245 (353)
T 3coi_A 173 ARHADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD--YLDQLTQILKVTGVPGT 245 (353)
T ss_dssp TTC-------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSC--HHHHHHHHHHHHCBCCH
T ss_pred ccCCCCC-----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHhCCCCH
Confidence 9765432 223468999999999876 678999999999999999999999997542 111111111000000 0
Q ss_pred cch------------hhccc---cccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 904 NVL------------KVLDC---EVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 904 ~~~------------~~~~~---~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
... ..... .............+.+++.+|++.||++|||+.++++|-
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp 307 (353)
T 3coi_A 246 EFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHP 307 (353)
T ss_dssp HHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSG
T ss_pred HHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCc
Confidence 000 00000 000011123456788999999999999999999999874
No 278
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=2.4e-36 Score=362.95 Aligned_cols=254 Identities=25% Similarity=0.306 Sum_probs=201.5
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCC---CceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKN---AGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~---~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
..+|++.+.||+|+||+||+|++..+ +..||||+.... ...+.+.+|+.++++++||||+++++++. ++..|+
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~l 467 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 467 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEE
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEE
Confidence 45789999999999999999998643 467999987653 23467889999999999999999999884 456899
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcc
Q 002063 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||+++|+|.+++... ...+++..+..++.|+++||+||| +++|+||||||+||+++.++.+||+|||+++.
T Consensus 468 v~E~~~~g~L~~~l~~~----~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDikp~NILl~~~~~vkL~DFG~a~~ 540 (656)
T 2j0j_A 468 IMELCTLGELRSFLQVR----KFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY 540 (656)
T ss_dssp EEECCTTCBHHHHHHHT----TTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCCCCS
T ss_pred EEEcCCCCcHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchHhEEEeCCCCEEEEecCCCee
Confidence 99999999999999753 335889999999999999999999 78999999999999999999999999999987
Q ss_pred ccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhcccccchh
Q 002063 829 AENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHENVLK 907 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (973)
...... .......+|+.|+|||++.+..++.++|||||||++|||++ |..||.... ..+....+.. ...
T Consensus 541 ~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~--~~~~~~~i~~---~~~---- 610 (656)
T 2j0j_A 541 MEDSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK--NNDVIGRIEN---GER---- 610 (656)
T ss_dssp CCC-----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--HHHHHHHHHH---TCC----
T ss_pred cCCCcc-eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCC--HHHHHHHHHc---CCC----
Confidence 644322 12223457789999999998899999999999999999997 999997541 1111111111 100
Q ss_pred hccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcC
Q 002063 908 VLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADA 953 (973)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 953 (973)
...+......+.+++.+||+.||++||++.++++.|+.+
T Consensus 611 -------~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~i 649 (656)
T 2j0j_A 611 -------LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 649 (656)
T ss_dssp -------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -------CCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 001122345688999999999999999999999999875
No 279
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=5e-36 Score=330.91 Aligned_cols=280 Identities=17% Similarity=0.210 Sum_probs=213.0
Q ss_pred CCchHHHHHHHHHHHhc-CCCcccccCCC---CCCCCCCCcceeeeCC--------CCCceEEEeecCCCCCcccccccc
Q 002063 27 LSLNVETQALIQFKSKL-KDPHGVLDSWK---ESADSPCGFSGITCDS--------VTGRVTEISFDNKSLSGEISSSIS 94 (973)
Q Consensus 27 ~~~~~~~~aLl~~k~~~-~d~~~~l~~W~---~~~~~~c~w~gv~C~~--------~~~~v~~l~l~~~~l~~~~~~~l~ 94 (973)
.++.+|++||++||+++ .||.+.+++|. ....++|.|.|+.|+. ...+|+.|+|++++++ .+|+.++
T Consensus 23 ~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l~ 101 (328)
T 4fcg_A 23 TALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQAF 101 (328)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCGG
T ss_pred ccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhhh
Confidence 45678999999999998 68888889994 3445689999999952 3478999999999998 8899999
Q ss_pred CCCCCcEEeCCCCcccCccCccccCCCCCcEEEecCCcccCCCCCcCCCCCCCEEeccCcccCCccccccccccccceEE
Q 002063 95 ALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLS 174 (973)
Q Consensus 95 ~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 174 (973)
.+++|++|+|++|.++ .+|..|+++++|++|+|++|.+...++.++++++|++|+|++|++.+.+|..+...
T Consensus 102 ~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~------- 173 (328)
T 4fcg_A 102 RLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLRALPASIASLNRLRELSIRACPELTELPEPLAST------- 173 (328)
T ss_dssp GGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCCCCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEE-------
T ss_pred hCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccccCcHHHhcCcCCCEEECCCCCCccccChhHhhc-------
Confidence 9999999999999999 89999999999999999999999776679999999999999998888888766541
Q ss_pred ccCCcCCCCCCcccccCCCCCCEEEcccccCCCCCChhhhccCCCCeeeccccccccccchhhhccccccEEEeecccCC
Q 002063 175 IGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLT 254 (973)
Q Consensus 175 l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~ 254 (973)
.++..++++++|++|+|++|+++ .+|..++.+++|++|+|++|+++ .+|..++.+++|++|+|++|++.
T Consensus 174 ---------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~-~l~~~l~~l~~L~~L~Ls~n~~~ 242 (328)
T 4fcg_A 174 ---------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTAL 242 (328)
T ss_dssp ---------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC-CCCGGGGGCTTCCEEECTTCTTC
T ss_pred ---------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC-cCchhhccCCCCCEEECcCCcch
Confidence 12233455666666666666666 56666666666666666666666 35555666666666666666666
Q ss_pred CCCCccccccccccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCccccceeeccccccC
Q 002063 255 GELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFS 326 (973)
Q Consensus 255 ~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 326 (973)
+.+|..+..+++|++|+|++|.+.+.+|..+.++++|+.|++++|++.+.+|..++.+++|+.+.+..|.+.
T Consensus 243 ~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 243 RNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp CBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred hhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 666666666777777777776666667766777777777777777777777777777777777766665554
No 280
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=2.3e-35 Score=353.73 Aligned_cols=350 Identities=16% Similarity=0.182 Sum_probs=228.4
Q ss_pred CcccccCCCCCCCCCCC---cceeeeCCCCCceEEEeecCCCCCccccccccCCCCCcEEeCCCCcccCccCccccCCCC
Q 002063 46 PHGVLDSWKESADSPCG---FSGITCDSVTGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSN 122 (973)
Q Consensus 46 ~~~~l~~W~~~~~~~c~---w~gv~C~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~ 122 (973)
....+++|.++.+||+. |.++.|+. .++....... ....-..+.+++.|++++|.++...+..|+.+++
T Consensus 5 ~~~~l~~~~~~~~C~~~~~~~~c~~~~~------~i~~~~~~~~--~~~~~l~l~~l~~l~l~~~~l~~lp~~~~~~l~~ 76 (597)
T 3oja_B 5 QRYNVKPRQPEYKCIDSNLQYDCVFYDV------HIDMQTQDVY--FGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQ 76 (597)
T ss_dssp ------CCCSEECCCCC--CCSEEECSC------EECSSCCCCE--ESCSSGGGCCCSEEEESSCEESEECTHHHHHCCC
T ss_pred ccccccCCCCCCcCcccCcCceeEecCc------eecccccccc--cCcccccCCCceEEEeeCCCCCCcCHHHHccCCC
Confidence 34457899887664443 65555542 1221111111 1112234678999999999998655556888999
Q ss_pred CcEEEecCCcccCCCC-CcCCCCCCCEEeccCcccCCccccccccccccceEEccCCcCCCCCCccc-ccCCCCCCEEEc
Q 002063 123 LKVLNVTGNAMVGSVP-DLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPES-IGNLKNLTYLFL 200 (973)
Q Consensus 123 L~~L~L~~n~l~~~~~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~-~~~l~~L~~L~L 200 (973)
|++|+|++|.+.+.++ .|+.+++|++|+|++|.+++..|..|+++++|++|+|++|.++ .+|.. ++++++|++|+|
T Consensus 77 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~--~l~~~~~~~l~~L~~L~L 154 (597)
T 3oja_B 77 VELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS--SLPRGIFHNTPKLTTLSM 154 (597)
T ss_dssp CSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC--CCCTTTTTTCTTCCEEEC
T ss_pred CcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCC--CCCHHHhccCCCCCEEEe
Confidence 9999999999988876 6899999999999999999888888888888888888888886 45554 578888888888
Q ss_pred ccccCCCCCChhhhccCCCCeeeccccccccccchhhhccccccEEEeecccCCCCCCccccccccccEEEeeccccccc
Q 002063 201 AHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGK 280 (973)
Q Consensus 201 ~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~ 280 (973)
++|.+++..|..|+.+++|++|+|++|++++. .++.+++|+.|++++|.+++ +...++|+.|++++|.+...
T Consensus 155 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---~~~~l~~L~~L~l~~n~l~~-----l~~~~~L~~L~ls~n~l~~~ 226 (597)
T 3oja_B 155 SNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHNSINVV 226 (597)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC---CGGGCTTCSEEECCSSCCSE-----EECCTTCSEEECCSSCCCEE
T ss_pred eCCcCCCCChhhhhcCCcCcEEECcCCCCCCc---ChhhhhhhhhhhcccCcccc-----ccCCchhheeeccCCccccc
Confidence 88888887787888888888888888888754 25566777777777777763 23445677777777776633
Q ss_pred cCCccCCCCCccEEEcccCCCCCCCCCCcCCccccceeeccccccCCCCCccccccccccccccccccccccCChhhhhh
Q 002063 281 LPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEK 360 (973)
Q Consensus 281 ~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~ 360 (973)
.+ .+ .++|+.|++++|.+++ +..++.+++|+.|++++|.+++..|..+
T Consensus 227 ~~-~~--~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~--------------------------- 274 (597)
T 3oja_B 227 RG-PV--NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPF--------------------------- 274 (597)
T ss_dssp EC-SC--CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGG---------------------------
T ss_pred cc-cc--CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHh---------------------------
Confidence 22 22 1355666666665553 2334444444444444444444444444
Q ss_pred hhHHHHHhhhccCCCCCCCcccCccccceEecccccccccCCccccCCCCcceEeccCCcCCCCCCCccCCCCCCCEEEc
Q 002063 361 RKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVL 440 (973)
Q Consensus 361 ~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L 440 (973)
+.+++|++|+|++|.+++ +|..+..+++|+.|+|++|.++++ +..+..+++|+.|+|
T Consensus 275 ---------------------~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~~i-~~~~~~l~~L~~L~L 331 (597)
T 3oja_B 275 ---------------------VKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLLHV-ERNQPQFDRLENLYL 331 (597)
T ss_dssp ---------------------TTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCCCC-GGGHHHHTTCSEEEC
T ss_pred ---------------------cCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCCcc-CcccccCCCCCEEEC
Confidence 444555555555555553 344444555666666666665532 233455667777777
Q ss_pred ccCCCCCCCChhhhcCCCCCEEecCCCcCCC
Q 002063 441 QNNRFSGELPSELGRLTNLERLILTNNNFSG 471 (973)
Q Consensus 441 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 471 (973)
++|.+++. | +..+++|+.|+|++|.+.+
T Consensus 332 ~~N~l~~~-~--~~~~~~L~~L~l~~N~~~~ 359 (597)
T 3oja_B 332 DHNSIVTL-K--LSTHHTLKNLTLSHNDWDC 359 (597)
T ss_dssp CSSCCCCC-C--CCTTCCCSEEECCSSCEEH
T ss_pred CCCCCCCc-C--hhhcCCCCEEEeeCCCCCC
Confidence 77777643 2 5667788888888888874
No 281
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.8e-36 Score=330.69 Aligned_cols=244 Identities=24% Similarity=0.337 Sum_probs=193.7
Q ss_pred HHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc--------cHHHHHHHHHHHHhc----CCCceeeEeEEE
Q 002063 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD--------GVKVFAAEMEILGKI----RHRNILKLYACL 740 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~--------~~~~~~~E~~~l~~l----~hpniv~l~~~~ 740 (973)
...++|++.+.||+|+||+||+|++..+++.||||++.... ....+.+|+++++++ +||||+++++++
T Consensus 28 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~ 107 (312)
T 2iwi_A 28 AFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWF 107 (312)
T ss_dssp -----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC
T ss_pred hhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEE
Confidence 34568999999999999999999999889999999986532 223356799999998 899999999999
Q ss_pred EeCCeeEEEEEc-cCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeec-CCCce
Q 002063 741 LKGGSSFLVLEY-MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLD-EDYEP 818 (973)
Q Consensus 741 ~~~~~~~lv~e~-~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~-~~~~~ 818 (973)
..++..++|||| +++++|.+++... ..+++..+..++.|+++||+||| +.+|+||||||+||+++ .++.+
T Consensus 108 ~~~~~~~~v~e~~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~ 179 (312)
T 2iwi_A 108 ETQEGFMLVLERPLPAQDLFDYITEK-----GPLGEGPSRCFFGQVVAAIQHCH---SRGVVHRDIKDENILIDLRRGCA 179 (312)
T ss_dssp -----CEEEEECCSSEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HHTEECCCCSGGGEEEETTTTEE
T ss_pred ecCCeEEEEEEecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChhhEEEeCCCCeE
Confidence 999999999999 7899999999864 24889999999999999999999 67999999999999999 88999
Q ss_pred EEecccCCccccCCCCcccccccCcccccccccccccCCCC-ccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHH
Q 002063 819 KIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVS-EKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVST 897 (973)
Q Consensus 819 kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~ 897 (973)
||+|||++....... .....|+..|+|||++.+..+. .++||||+|+++|||++|+.||.... ....
T Consensus 180 kl~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-------~~~~- 247 (312)
T 2iwi_A 180 KLIDFGSGALLHDEP----YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ-------EILE- 247 (312)
T ss_dssp EECCCSSCEECCSSC----BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------HHHH-
T ss_pred EEEEcchhhhcccCc----ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH-------HHhh-
Confidence 999999998765432 2335689999999998877765 48999999999999999999996431 0000
Q ss_pred hhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 898 HLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
... . ........+.+++.+||+.||++||++.|++++-.
T Consensus 248 ---~~~--------~----~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~ 286 (312)
T 2iwi_A 248 ---AEL--------H----FPAHVSPDCCALIRRCLAPKPSSRPSLEEILLDPW 286 (312)
T ss_dssp ---TCC--------C----CCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTT
T ss_pred ---hcc--------C----CcccCCHHHHHHHHHHccCChhhCcCHHHHhcChh
Confidence 000 0 01122346788999999999999999999998654
No 282
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=7.3e-36 Score=329.41 Aligned_cols=252 Identities=24% Similarity=0.338 Sum_probs=181.4
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecccc----HHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEE
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDG----VKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~----~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 749 (973)
..++|++.+.||+|+||+||+|++..+++.||||++..... .+.+.++..+++.++||||+++++++..++..++|
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv 102 (318)
T 2dyl_A 23 EINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIA 102 (318)
T ss_dssp CGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEE
Confidence 45688999999999999999999998899999999876322 23344455668888999999999999999999999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCC-CCeEecCCCCCCeeecCCCceEEecccCCcc
Q 002063 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCS-PPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~-~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
|||+ ++.+..+.... ...+++..+..++.|+++||+||| + .+++||||||+||+++.++.+||+|||++..
T Consensus 103 ~e~~-~~~~~~l~~~~----~~~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~ 174 (318)
T 2dyl_A 103 MELM-GTCAEKLKKRM----QGPIPERILGKMTVAIVKALYYLK---EKHGVIHRDVKPSNILLDERGQIKLCDFGISGR 174 (318)
T ss_dssp ECCC-SEEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHH---HHHCCCCCCCCGGGEEECTTSCEEECCCTTC--
T ss_pred Eecc-CCcHHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHH---hhCCEEeCCCCHHHEEECCCCCEEEEECCCchh
Confidence 9999 55555555432 345889999999999999999999 5 3899999999999999999999999999976
Q ss_pred ccCCCCcccccccCcccccccccccc-----cCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccc
Q 002063 829 AENSPKVSDYSCFAGTHGYIAPELAY-----TCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHE 903 (973)
Q Consensus 829 ~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 903 (973)
...... .....||+.|+|||++. +..++.++|||||||++|||++|+.||..... .............
T Consensus 175 ~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----~~~~~~~~~~~~~ 247 (318)
T 2dyl_A 175 LVDDKA---KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKT----DFEVLTKVLQEEP 247 (318)
T ss_dssp ---------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCS----HHHHHHHHHHSCC
T ss_pred ccCCcc---ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCc----cHHHHHHHhccCC
Confidence 543321 22346899999999984 55688999999999999999999999975321 1111111111111
Q ss_pred cchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 904 NVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
.. .. ........+.+++.+||+.||.+||++.+++++
T Consensus 248 ~~-------~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 248 PL-------LP--GHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp CC-------CC--SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred CC-------CC--ccCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 00 00 001123468889999999999999999999875
No 283
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=1.4e-35 Score=340.64 Aligned_cols=256 Identities=22% Similarity=0.324 Sum_probs=187.4
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHhc-CCCceeeEeEEEEeCCeeEEEEEccCC
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSFLVLEYMPN 755 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~~~~ 755 (973)
.|...+.||+|+||+||.+.. .+|+.||||++..+. .+.+.+|+++++++ +||||+++++++.+++..|+||||++
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~-~~g~~vAvK~~~~~~-~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~- 92 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGS-FQGRPVAVKRMLIDF-CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN- 92 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEE-SSSSEEEEEEEEGGG-HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-
T ss_pred eeeccCeEeeCCCeEEEEEEE-ECCeEEEEEEEcHHH-HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-
Confidence 455678899999999987544 458999999886543 45678999999886 89999999999999999999999995
Q ss_pred CchHHHHHhhhcCCCC--CcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCC-------------CceEE
Q 002063 756 GNLFQALHKRVKEGKP--ELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDED-------------YEPKI 820 (973)
Q Consensus 756 gsL~~~l~~~~~~~~~--~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~-------------~~~kl 820 (973)
|+|.+++......... ..++..+..++.|++.||+||| +.+|+||||||+||+++.+ +.+||
T Consensus 93 gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL 169 (434)
T 2rio_A 93 LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILI 169 (434)
T ss_dssp EEHHHHHHTC------------CCHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEE
T ss_pred CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCcccccccccCCCceEEEE
Confidence 6999999864221110 1123345789999999999999 7899999999999999754 47999
Q ss_pred ecccCCccccCCCCcc--cccccCccccccccccccc-------CCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCcc
Q 002063 821 ADFGVAKIAENSPKVS--DYSCFAGTHGYIAPELAYT-------CKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKD 890 (973)
Q Consensus 821 ~Dfgl~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~ 890 (973)
+|||+++......... ......||+.|+|||++.+ ..++.++||||+||++|||++ |+.||......
T Consensus 170 ~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~--- 246 (434)
T 2rio_A 170 SDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR--- 246 (434)
T ss_dssp CCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTH---
T ss_pred cccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhh---
Confidence 9999998775432211 1234579999999999865 668999999999999999999 99999654211
Q ss_pred HHHHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHh
Q 002063 891 IVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKML 950 (973)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 950 (973)
......... .. ..............+.+++.+||+.||.+||++.|+++|-
T Consensus 247 ~~~i~~~~~-~~--------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp 297 (434)
T 2rio_A 247 ESNIIRGIF-SL--------DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHP 297 (434)
T ss_dssp HHHHHHTCC-CC--------CCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSG
T ss_pred HHHHhcCCC-Cc--------ccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCC
Confidence 111111110 00 0111112345567889999999999999999999998753
No 284
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=4.8e-36 Score=352.63 Aligned_cols=263 Identities=25% Similarity=0.300 Sum_probs=197.4
Q ss_pred HHHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEe------
Q 002063 672 AEQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLK------ 742 (973)
Q Consensus 672 ~~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~------ 742 (973)
....++|++.+.||+|+||+||+|.+..+++.||||++... ...+.+.+|++++++++||||+++++++..
T Consensus 10 g~~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~ 89 (676)
T 3qa8_A 10 TQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAP 89 (676)
T ss_dssp -------CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCT
T ss_pred CCCCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccC
Confidence 34457899999999999999999999988999999988653 345668899999999999999999998755
Q ss_pred CCeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCc---eE
Q 002063 743 GGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYE---PK 819 (973)
Q Consensus 743 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~---~k 819 (973)
++..|+||||+++|+|.+++... .....+++..+..++.|++.||+||| +.+|+||||||+||+++.++. +|
T Consensus 90 ~~~~~LVmEy~~ggsL~~~L~~~--~~~~~lse~~i~~I~~QLl~aL~yLH---s~gIVHrDLKP~NILl~~~g~~~~vK 164 (676)
T 3qa8_A 90 NDLPLLAMEYCEGGDLRKYLNQF--ENCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHK 164 (676)
T ss_dssp TSSCCCEEECCSSCBHHHHHHSS--SCTTCCCSSHHHHHHHHHHHHHHHHH---HTTBCCCCCCSTTEEEECCSSSCEEE
T ss_pred CCeEEEEEEeCCCCCHHHHHHhc--ccCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEeecCCCceeEE
Confidence 66789999999999999999864 22335788889999999999999999 789999999999999997765 99
Q ss_pred EecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhh
Q 002063 820 IADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHL 899 (973)
Q Consensus 820 l~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~ 899 (973)
|+|||.+........ .....||+.|+|||++.+..++.++||||+||++|||++|+.||.... ....|.....
T Consensus 165 L~DFG~a~~~~~~~~---~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~----~~~~~~~~i~ 237 (676)
T 3qa8_A 165 IIDLGYAKELDQGEL---CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNW----QPVQWHGKVR 237 (676)
T ss_dssp ECSCCCCCBTTSCCC---CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSC----HHHHSSTTCC
T ss_pred Ecccccccccccccc---cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCccc----chhhhhhhhh
Confidence 999999987654322 234578999999999999999999999999999999999999996431 1111100000
Q ss_pred cccc---cchhhccc--------cccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHH
Q 002063 900 NNHE---NVLKVLDC--------EVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREV 946 (973)
Q Consensus 900 ~~~~---~~~~~~~~--------~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~ev 946 (973)
.... ........ .............+.+++.+||++||++|||+.++
T Consensus 238 ~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el 295 (676)
T 3qa8_A 238 EKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN 295 (676)
T ss_dssp ------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred cccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence 0000 00000000 00111233456778999999999999999999774
No 285
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.3e-35 Score=337.63 Aligned_cols=250 Identities=22% Similarity=0.332 Sum_probs=183.5
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHhc-CCCceeeEeEEEEeCCeeEEEEEccC
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSFLVLEYMP 754 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~~~ 754 (973)
.+|+..+.||+|+||+||... ..+++.||||++..+. ...+.+|+++++++ +||||+++++++.++...|+||||++
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~-~~~~~~vAvK~~~~~~-~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~ 101 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRG-MFDNRDVAVKRILPEC-FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA 101 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEE-ESSSSEEEEEEECTTT-EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred EEEecCCeeecCcCEEEEEEE-EeCCeEEEEEEECHHH-HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC
Confidence 357888999999999976433 3458899999986532 22356899999999 89999999999999999999999995
Q ss_pred CCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecC---C--CceEEecccCCccc
Q 002063 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE---D--YEPKIADFGVAKIA 829 (973)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~---~--~~~kl~Dfgl~~~~ 829 (973)
|+|.+++... .....+..+..++.|+++||+||| +.+|+||||||+||+++. + ..+||+|||+++..
T Consensus 102 -g~L~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~ 173 (432)
T 3p23_A 102 -ATLQEYVEQK----DFAHLGLEPITLLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKL 173 (432)
T ss_dssp -EEHHHHHHSS----SCCCCSSCHHHHHHHHHHHHHHHH---HTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC
T ss_pred -CCHHHHHHhc----CCCccchhHHHHHHHHHHHHHHHH---HCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeec
Confidence 6999999754 122333455689999999999999 789999999999999953 2 35789999999876
Q ss_pred cCCCCc-ccccccCcccccccccccc---cCCCCccchHHHHHHHHHHHHh-CCCCCCcccCCCccHHHHHHHhhccccc
Q 002063 830 ENSPKV-SDYSCFAGTHGYIAPELAY---TCKVSEKSDVFSFGVVLLELVT-GRKPVEEEYGDGKDIVYWVSTHLNNHEN 904 (973)
Q Consensus 830 ~~~~~~-~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslG~~l~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 904 (973)
...... .......||+.|+|||++. +..++.++||||+||++|||++ |..||..... . ..........
T Consensus 174 ~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~---~---~~~~~~~~~~- 246 (432)
T 3p23_A 174 AVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ---R---QANILLGACS- 246 (432)
T ss_dssp ------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTT---H---HHHHHTTCCC-
T ss_pred cCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhH---H---HHHHHhccCC-
Confidence 543221 2233457999999999987 4567889999999999999999 9999964321 1 0111111000
Q ss_pred chhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Q 002063 905 VLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKM 949 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 949 (973)
. .. . .........+.+++.+||+.||.+||++.|+++|
T Consensus 247 ~-~~----~--~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~h 284 (432)
T 3p23_A 247 L-DC----L--HPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKH 284 (432)
T ss_dssp C-TT----S--CTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred c-cc----c--CccccccHHHHHHHHHHHhCCHhhCCCHHHHHhC
Confidence 0 00 0 1112334457889999999999999999999965
No 286
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=8.4e-35 Score=314.60 Aligned_cols=231 Identities=10% Similarity=0.054 Sum_probs=184.1
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc-----cHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEEE
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-----GVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 749 (973)
.++|++.+.||+|+||+||+|++..+++.||||++.... ..+.+.+|++++++++||||+++++++..++..|+|
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 357999999999999999999999989999999987632 236789999999999999999999999999999999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccc
Q 002063 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
|||+++++|.+++... ....++..++.|++.||+||| +++|+||||||+||+++.++.+||+++|
T Consensus 110 ~e~~~g~~L~~~l~~~-------~~~~~~~~i~~ql~~aL~~lH---~~givH~Dikp~NIll~~~g~~kl~~~~----- 174 (286)
T 3uqc_A 110 AEWIRGGSLQEVADTS-------PSPVGAIRAMQSLAAAADAAH---RAGVALSIDHPSRVRVSIDGDVVLAYPA----- 174 (286)
T ss_dssp EECCCEEEHHHHHTTC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEETTSCEEECSCC-----
T ss_pred EEecCCCCHHHHHhcC-------CChHHHHHHHHHHHHHHHHHH---HCCCccCCCCcccEEEcCCCCEEEEecc-----
Confidence 9999999999998531 244567889999999999999 7899999999999999999999998544
Q ss_pred cCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhc
Q 002063 830 ENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVL 909 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (973)
|++ .++.++|||||||++|||++|+.||......... .......
T Consensus 175 -----------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~------------~~~~~~~ 218 (286)
T 3uqc_A 175 -----------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGL------------APAERDT 218 (286)
T ss_dssp -----------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCS------------EECCBCT
T ss_pred -----------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhh------------HHHHHHh
Confidence 333 2688999999999999999999999764221100 0000000
Q ss_pred ccccc--ChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhhcCCCCC
Q 002063 910 DCEVA--SESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLADADPCT 957 (973)
Q Consensus 910 ~~~~~--~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~ 957 (973)
..... ..........+.+++.+||+.||++| |+.|+++.|+++....
T Consensus 219 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~ 267 (286)
T 3uqc_A 219 AGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVA 267 (286)
T ss_dssp TSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC--
T ss_pred ccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccC
Confidence 01000 01112334568899999999999999 9999999999865433
No 287
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=9.7e-34 Score=316.49 Aligned_cols=304 Identities=22% Similarity=0.317 Sum_probs=152.4
Q ss_pred CCCCCEEEcccccCCCCCChhhhccCCCCeeeccccccccccchhhhccccccEEEeecccCCCCCCccccccccccEEE
Q 002063 192 LKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFD 271 (973)
Q Consensus 192 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~ 271 (973)
+++|++|++++|.+.. ++ .+..+++|++|++++|++++. +. +..+++|++|++++|.+++ + +.+..+++|++|+
T Consensus 43 l~~L~~L~l~~~~i~~-~~-~~~~~~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~L~~n~i~~-~-~~~~~l~~L~~L~ 116 (347)
T 4fmz_A 43 LESITKLVVAGEKVAS-IQ-GIEYLTNLEYLNLNGNQITDI-SP-LSNLVKLTNLYIGTNKITD-I-SALQNLTNLRELY 116 (347)
T ss_dssp HTTCSEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCSEEE
T ss_pred cccccEEEEeCCcccc-ch-hhhhcCCccEEEccCCccccc-hh-hhcCCcCCEEEccCCcccC-c-hHHcCCCcCCEEE
Confidence 3444444444444442 22 244444444444444444422 22 4444444444444444442 2 2344455555555
Q ss_pred eeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCccccceeeccccccCCCCCccccccccccccccccccccc
Q 002063 272 ISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSG 351 (973)
Q Consensus 272 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~ 351 (973)
+++|.+.+. +. +..+++|+.|++++|.....++ .+..+++|+.|++++|.+.+..+ +..+++|+.|++++|.+.+
T Consensus 117 l~~n~i~~~-~~-~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~ 191 (347)
T 4fmz_A 117 LNEDNISDI-SP-LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIED 191 (347)
T ss_dssp CTTSCCCCC-GG-GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCC
T ss_pred CcCCcccCc-hh-hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcccc
Confidence 555554422 21 4445555555555553332222 24455555555555555543222 4555555555555555541
Q ss_pred cCChhhhhhhhHHHHHhhhccCCCCCCCcccCccccceEecccccccccCCccccCCCCcceEeccCCcCCCCCCCccCC
Q 002063 352 SFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGL 431 (973)
Q Consensus 352 ~~p~~~~~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 431 (973)
++. +..+++|++|++++|.+.+..+ +..+++|+.|++++|++++..+ +..
T Consensus 192 -------------------------~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~ 241 (347)
T 4fmz_A 192 -------------------------ISP-LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LAN 241 (347)
T ss_dssp -------------------------CGG-GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTT
T ss_pred -------------------------ccc-ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhc
Confidence 111 3344556666666666553333 4555555555555555554433 455
Q ss_pred CCCCCEEEcccCCCCCCCChhhhcCCCCCEEecCCCcCCCCccccccccccCCEEEccCcccccCCCccccCccccchhh
Q 002063 432 STSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLN 511 (973)
Q Consensus 432 ~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 511 (973)
+++|++|++++|.+++. ..+..+++|+.|++++|++++. ..+..+++|+.|+|++|++++..|..++++++|+.|+
T Consensus 242 l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~ 317 (347)
T 4fmz_A 242 LSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLF 317 (347)
T ss_dssp CTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEE
T ss_pred CCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEE
Confidence 55666666666665532 3455566666666666666543 2355566666666666666655555556666666666
Q ss_pred ccccccccCCCccccccCCCCeeecCCCccC
Q 002063 512 LARNSLSGNIPRSLSLLSSLNALNLSGNKLT 542 (973)
Q Consensus 512 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 542 (973)
+++|++++..| +..+++|+.|++++|+|+
T Consensus 318 L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 318 LSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp CCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred ccCCccccccC--hhhhhccceeehhhhccc
Confidence 66666654444 555666666666666554
No 288
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=2.5e-33 Score=313.19 Aligned_cols=305 Identities=25% Similarity=0.403 Sum_probs=153.0
Q ss_pred cCCCCCcEEEecCCcccCCCCCcCCCCCCCEEeccCcccCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCE
Q 002063 118 SNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTY 197 (973)
Q Consensus 118 ~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~ 197 (973)
..+++|++|++++|.+... +.+..+++|++|++++|.+++..+ +..+++|++|++++|.++. + +.+.++++|++
T Consensus 41 ~~l~~L~~L~l~~~~i~~~-~~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~--~-~~~~~l~~L~~ 114 (347)
T 4fmz_A 41 EELESITKLVVAGEKVASI-QGIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITD--I-SALQNLTNLRE 114 (347)
T ss_dssp HHHTTCSEEECCSSCCCCC-TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC--C-GGGTTCTTCSE
T ss_pred hhcccccEEEEeCCccccc-hhhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccC--c-hHHcCCCcCCE
Confidence 3445555555555555433 235555556666666655553322 5555555555555555542 2 34667777777
Q ss_pred EEcccccCCCCCChhhhccCCCCeeeccccccccccchhhhccccccEEEeecccCCCCCCccccccccccEEEeecccc
Q 002063 198 LFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQM 277 (973)
Q Consensus 198 L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l 277 (973)
|++++|.+++. +. +..+++|++|++++|.....++ .+..+++|++|++++|.+++..+ +..+++|++|++++|.+
T Consensus 115 L~l~~n~i~~~-~~-~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l 189 (347)
T 4fmz_A 115 LYLNEDNISDI-SP-LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQI 189 (347)
T ss_dssp EECTTSCCCCC-GG-GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCC
T ss_pred EECcCCcccCc-hh-hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcc
Confidence 77777777743 32 6677777777777775443332 35666666666666666653322 55555555555555555
Q ss_pred ccccCCccCCCCCccEEEcccCCCCCCCCCCcCCccccceeeccccccCCCCCccccccccccccccccccccccCChhh
Q 002063 278 YGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYL 357 (973)
Q Consensus 278 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~ 357 (973)
.+..+ +..+++|+.|++++|.+.+. .+ +..+++|++|++++|++++
T Consensus 190 ~~~~~--~~~l~~L~~L~l~~n~l~~~------------------------~~--~~~~~~L~~L~l~~n~l~~------ 235 (347)
T 4fmz_A 190 EDISP--LASLTSLHYFTAYVNQITDI------------------------TP--VANMTRLNSLKIGNNKITD------ 235 (347)
T ss_dssp CCCGG--GGGCTTCCEEECCSSCCCCC------------------------GG--GGGCTTCCEEECCSSCCCC------
T ss_pred ccccc--ccCCCccceeecccCCCCCC------------------------ch--hhcCCcCCEEEccCCccCC------
Confidence 42211 44444444444444444322 21 3444444555555544441
Q ss_pred hhhhhHHHHHhhhccCCCCCCCcccCccccceEecccccccccCCccccCCCCcceEeccCCcCCCCCCCccCCCCCCCE
Q 002063 358 CEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQ 437 (973)
Q Consensus 358 ~~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~ 437 (973)
++. +..+++|++|++++|.+++. ..+..+++|+.|++++|++++. +.+..+++|+.
T Consensus 236 -------------------~~~-~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~ 291 (347)
T 4fmz_A 236 -------------------LSP-LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNS 291 (347)
T ss_dssp -------------------CGG-GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSE
T ss_pred -------------------Ccc-hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCE
Confidence 111 33445555555555555432 2344444444444444444432 22344444555
Q ss_pred EEcccCCCCCCCChhhhcCCCCCEEecCCCcCCCCccccccccccCCEEEccCccc
Q 002063 438 LVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENAL 493 (973)
Q Consensus 438 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 493 (973)
|+|++|++++..|..+..+++|+.|++++|++++..| +..+++|++|++++|.|
T Consensus 292 L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i 345 (347)
T 4fmz_A 292 LFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVI 345 (347)
T ss_dssp EECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC--
T ss_pred EECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhcc
Confidence 5555555554444445555555555555555544333 44445555555555544
No 289
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=4.6e-34 Score=311.83 Aligned_cols=236 Identities=23% Similarity=0.311 Sum_probs=183.3
Q ss_pred HhcCCccc-CeecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHH-HhcCCCceeeEeEEEEe----CCeeE
Q 002063 674 QICNLEED-NLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEIL-GKIRHRNILKLYACLLK----GGSSF 747 (973)
Q Consensus 674 ~~~~~~~~-~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l-~~l~hpniv~l~~~~~~----~~~~~ 747 (973)
..++|.+. +.||+|+||+||+|++..+++.||||++... ..+.+|++++ +..+||||+++++++.. +...+
T Consensus 15 ~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 91 (299)
T 3m2w_A 15 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC---PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 91 (299)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS---HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc---HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence 35677777 7799999999999999999999999998643 4567889888 55699999999999877 66789
Q ss_pred EEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecC---CCceEEeccc
Q 002063 748 LVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDE---DYEPKIADFG 824 (973)
Q Consensus 748 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~---~~~~kl~Dfg 824 (973)
+||||+++|+|.+++... ....+++..+..++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||
T Consensus 92 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg 165 (299)
T 3m2w_A 92 IVMECLDGGELFSRIQDR---GDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFG 165 (299)
T ss_dssp EEECCCCSCBHHHHHHHC---TTCCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCT
T ss_pred EEEeecCCCcHHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEecCCCCCcEEEeccc
Confidence 999999999999999864 2345899999999999999999999 789999999999999998 7889999999
Q ss_pred CCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccccc
Q 002063 825 VAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHEN 904 (973)
Q Consensus 825 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 904 (973)
++.... +..++.++||||+||++|||++|+.||........ .......
T Consensus 166 ~a~~~~------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~------~~~~~~~-- 213 (299)
T 3m2w_A 166 FAKETT------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI------SPGMKTR-- 213 (299)
T ss_dssp TCEECT------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------------CCSCCS--
T ss_pred cccccc------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh------hHHHHHH--
Confidence 886432 23467789999999999999999999965421100 0000000
Q ss_pred chhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHhh
Q 002063 905 VLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVKMLA 951 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 951 (973)
...................+.+++.+||+.||.+||++.|+++|-.
T Consensus 214 -~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~ 259 (299)
T 3m2w_A 214 -IRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW 259 (299)
T ss_dssp -SCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred -HhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChh
Confidence 0000001111111234567889999999999999999999998643
No 290
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.7e-34 Score=349.12 Aligned_cols=238 Identities=22% Similarity=0.328 Sum_probs=191.7
Q ss_pred HhcCCcccCeecccCcEEEEEEEEcC-CCceEEEEEeecc---ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCe----
Q 002063 674 QICNLEEDNLIGSGGTGKVYRLDLKK-NAGTVAVKQLWKG---DGVKVFAAEMEILGKIRHRNILKLYACLLKGGS---- 745 (973)
Q Consensus 674 ~~~~~~~~~~lG~G~~g~Vy~a~~~~-~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~---- 745 (973)
..++|++.+.||+|+||+||+|++.. +++.||||++... .....+.+|++++++++||||+++++++...+.
T Consensus 78 ~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 157 (681)
T 2pzi_A 78 VAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDP 157 (681)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCE
T ss_pred eCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCc
Confidence 34689999999999999999999975 6899999988653 334567899999999999999999999987655
Q ss_pred -eEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEeccc
Q 002063 746 -SFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFG 824 (973)
Q Consensus 746 -~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 824 (973)
.|+||||+++++|.+++.. .+++..+..++.|+++||+||| +++|+||||||+||+++.+ .+||+|||
T Consensus 158 ~~~lv~E~~~g~~L~~~~~~-------~l~~~~~~~~~~qi~~aL~~lH---~~giiHrDlkp~NIll~~~-~~kl~DFG 226 (681)
T 2pzi_A 158 VGYIVMEYVGGQSLKRSKGQ-------KLPVAEAIAYLLEILPALSYLH---SIGLVYNDLKPENIMLTEE-QLKLIDLG 226 (681)
T ss_dssp EEEEEEECCCCEECC----C-------CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSS-CEEECCCT
T ss_pred eeEEEEEeCCCCcHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHH---HCCCeecccChHHeEEeCC-cEEEEecc
Confidence 6999999999999887652 5899999999999999999999 7899999999999999985 89999999
Q ss_pred CCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcccCCCccHHHHHHHhhccccc
Q 002063 825 VAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHEN 904 (973)
Q Consensus 825 l~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 904 (973)
+++..... ....||+.|+|||++.+.. +.++|||||||++|+|++|..||........
T Consensus 227 ~a~~~~~~------~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~--------------- 284 (681)
T 2pzi_A 227 AVSRINSF------GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDGL--------------- 284 (681)
T ss_dssp TCEETTCC------SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSSC---------------
T ss_pred cchhcccC------CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccccc---------------
Confidence 99866432 3356899999999987654 8899999999999999999988865321100
Q ss_pred chhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCH-HHHHHHhhc
Q 002063 905 VLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPM-REVVKMLAD 952 (973)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~-~evl~~L~~ 952 (973)
............+.+++.+||++||.+||+. .++.+.+..
T Consensus 285 --------~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 325 (681)
T 2pzi_A 285 --------PEDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG 325 (681)
T ss_dssp --------CTTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred --------cccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence 0011122334568899999999999999964 445544443
No 291
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=3e-34 Score=327.33 Aligned_cols=242 Identities=15% Similarity=0.132 Sum_probs=180.7
Q ss_pred cCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc-----ccHHHHHHHHHHHHhcCC-Cce---------ee-----
Q 002063 676 CNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-----DGVKVFAAEMEILGKIRH-RNI---------LK----- 735 (973)
Q Consensus 676 ~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~h-pni---------v~----- 735 (973)
..|...+.||+|+||+||+|++..+++.||||++... ...+.+.+|+.+++.++| ++. +.
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 3467788999999999999999999999999988732 235678999999999976 211 11
Q ss_pred -------EeEEEEe-----CCeeEEEEEccCCCchHHHHHhhh--cCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeE
Q 002063 736 -------LYACLLK-----GGSSFLVLEYMPNGNLFQALHKRV--KEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPII 801 (973)
Q Consensus 736 -------l~~~~~~-----~~~~~lv~e~~~~gsL~~~l~~~~--~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~iv 801 (973)
++.++.. ....+++|+++ +++|.+++.... ......+++..+..++.|+++||+||| +++|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGLV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTEE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcc
Confidence 1111111 22457777776 789999986321 122345778899999999999999999 78999
Q ss_pred ecCCCCCCeeecCCCceEEecccCCccccCCCCcccccccCccccccccccc----------ccCCCCccchHHHHHHHH
Q 002063 802 HRDIKSSNILLDEDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELA----------YTCKVSEKSDVFSFGVVL 871 (973)
Q Consensus 802 H~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~DvwslG~~l 871 (973)
||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++|||||||++
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil 307 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAI 307 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHH
Confidence 9999999999999999999999998765432 233467 999999998 555688999999999999
Q ss_pred HHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccccChhhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Q 002063 872 LELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIKLLKIAVVCTTKLPNLRPPMREVVK 948 (973)
Q Consensus 872 ~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~ 948 (973)
|||++|+.||....... ....++... ...+..+.+++.+||+.||++||++.++++
T Consensus 308 ~elltg~~Pf~~~~~~~---------------~~~~~~~~~------~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 308 YWIWCADLPNTDDAALG---------------GSEWIFRSC------KNIPQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp HHHHHSSCCCCTTGGGS---------------CSGGGGSSC------CCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHHCCCCCCCcchhh---------------hHHHHHhhc------ccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 99999999997542110 011111100 012356889999999999999999777654
No 292
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=2.4e-32 Score=302.86 Aligned_cols=287 Identities=23% Similarity=0.322 Sum_probs=134.9
Q ss_pred CCEEEcccccCCCCCChhhhccCCCCeeeccccccccccchhhhccccccEEEeecccCCCCCCccccccccccEEEeec
Q 002063 195 LTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISS 274 (973)
Q Consensus 195 L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~ 274 (973)
++.+++++|.++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|++++
T Consensus 35 l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 111 (332)
T 2ft3_A 35 LRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISK 111 (332)
T ss_dssp TTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCS
T ss_pred CCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCC
Confidence 444444444444 3333221 3444444444444433344444444444444444444444444444444455555554
Q ss_pred cccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCccccceeeccccccC--CCCCcccccccccccccccccccccc
Q 002063 275 NQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFS--GPFPENLGRYTALTDVDISENQFSGS 352 (973)
Q Consensus 275 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~--~~~~~~l~~l~~L~~L~Ls~N~l~~~ 352 (973)
|+++ .+|..+. ++|++|++++|++.+..+..|..+++|+.|++++|.++ +..+..+..+ +|+.|++++|++++
T Consensus 112 n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~- 186 (332)
T 2ft3_A 112 NHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG- 186 (332)
T ss_dssp SCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-
T ss_pred CcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-
Confidence 4444 3333332 34444444444444333333444444444444444443 2334444444 55555555555552
Q ss_pred CChhhhhhhhHHHHHhhhccCCCCCCCcccCccccceEecccccccccCCccccCCCCcceEeccCCcCCCCCCCccCCC
Q 002063 353 FPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLS 432 (973)
Q Consensus 353 ~p~~~~~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~ 432 (973)
+| ..+. ++|++|+|++|.+++..+..|..+++|+.|++++|++++..+.
T Consensus 187 l~------------------------~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~----- 235 (332)
T 2ft3_A 187 IP------------------------KDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENG----- 235 (332)
T ss_dssp CC------------------------SSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTT-----
T ss_pred cC------------------------cccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChh-----
Confidence 22 1111 3555556666655555555555555555555555544444444
Q ss_pred CCCCEEEcccCCCCCCCChhhhcCCCCCEEecCCCcCCCCccccccccccCCEEEccCcccccCCCccccC------ccc
Q 002063 433 TSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGD------CAR 506 (973)
Q Consensus 433 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~------l~~ 506 (973)
.+..+++|+.|+|++|+++ .+|..+..+++|+.|+|++|++++..+..|.. ...
T Consensus 236 -------------------~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~ 295 (332)
T 2ft3_A 236 -------------------SLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAY 295 (332)
T ss_dssp -------------------GGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCC
T ss_pred -------------------HhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHcccccccccccc
Confidence 4444444444444444444 34444444444444444444444444444333 234
Q ss_pred cchhhccccccc--cCCCccccccCCCCeeecCCCc
Q 002063 507 IVDLNLARNSLS--GNIPRSLSLLSSLNALNLSGNK 540 (973)
Q Consensus 507 L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~L~~N~ 540 (973)
|+.|++++|.+. +..|..|..+++|+.|+|++|+
T Consensus 296 l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 296 YNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp BSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred ccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 555666666555 4555666666666666666663
No 293
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=4e-32 Score=301.15 Aligned_cols=287 Identities=19% Similarity=0.261 Sum_probs=198.9
Q ss_pred CCCeeeccccccccccchhhhccccccEEEeecccCCCCCCccccccccccEEEeeccccccccCCccCCCCCccEEEcc
Q 002063 218 ELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCF 297 (973)
Q Consensus 218 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 297 (973)
+++.+++++|.++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..++++++|++|+++
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 4666666666665 4454442 456666666666654445555666666666666666655555555555666666665
Q ss_pred cCCCCCCCCCCcCCccccceeeccccccCCCCCccccccccccccccccccccccCChhhhhhhhHHHHHhhhccCCCCC
Q 002063 298 KNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEV 377 (973)
Q Consensus 298 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~nn~~~~~ 377 (973)
+|+++ .+|..+. ++|++|++++|++++..+..
T Consensus 111 ~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~--------------------------------------------- 142 (332)
T 2ft3_A 111 KNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGV--------------------------------------------- 142 (332)
T ss_dssp SSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGG---------------------------------------------
T ss_pred CCcCC-ccCcccc--ccCCEEECCCCccCccCHhH---------------------------------------------
Confidence 55555 3333222 34444444444444333333
Q ss_pred CCcccCccccceEeccccccc--ccCCccccCCCCcceEeccCCcCCCCCCCccCCCCCCCEEEcccCCCCCCCChhhhc
Q 002063 378 PNSYADCKTIQRLRISDNHLS--GKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGR 455 (973)
Q Consensus 378 p~~~~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~ 455 (973)
|..+++|++|++++|.++ +..|..+..+ +|+.|++++|++++.+... .++|++|+|++|++++..+..+..
T Consensus 143 ---~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~l~~~~---~~~L~~L~l~~n~i~~~~~~~l~~ 215 (332)
T 2ft3_A 143 ---FSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGIPKDL---PETLNELHLDHNKIQAIELEDLLR 215 (332)
T ss_dssp ---GSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSSCCSSS---CSSCSCCBCCSSCCCCCCTTSSTT
T ss_pred ---hCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCccCccc---cCCCCEEECCCCcCCccCHHHhcC
Confidence 444555555555555553 2455555555 6666666666666544332 268899999999999888889999
Q ss_pred CCCCCEEecCCCcCCCCccccccccccCCEEEccCcccccCCCccccCccccchhhccccccccCCCccccc------cC
Q 002063 456 LTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSL------LS 529 (973)
Q Consensus 456 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~------l~ 529 (973)
+++|+.|+|++|++++..+..+..+++|+.|+|++|+++ .+|..+..+++|+.|++++|+|++..+..|.. ..
T Consensus 216 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~ 294 (332)
T 2ft3_A 216 YSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRA 294 (332)
T ss_dssp CTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSC
T ss_pred CCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccc
Confidence 999999999999999888889999999999999999999 78888999999999999999999877777765 36
Q ss_pred CCCeeecCCCccC--CCCCchhhccc-CceEEccCCc
Q 002063 530 SLNALNLSGNKLT--GSIPDNLMKLK-LSSIDLSENQ 563 (973)
Q Consensus 530 ~L~~L~L~~N~l~--~~~p~~~~~l~-L~~l~ls~N~ 563 (973)
+|+.|++++|++. +..|..+..++ |+.+++++|+
T Consensus 295 ~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 295 YYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred cccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 7999999999998 67778888886 9999999985
No 294
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=6.9e-34 Score=315.99 Aligned_cols=243 Identities=14% Similarity=0.146 Sum_probs=185.8
Q ss_pred hcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc----------cHHHHHHHHHHHHhcC---------CCceee
Q 002063 675 ICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD----------GVKVFAAEMEILGKIR---------HRNILK 735 (973)
Q Consensus 675 ~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~----------~~~~~~~E~~~l~~l~---------hpniv~ 735 (973)
.++|++.+.||+|+||+||+|++ +++.||||++.... ..+.+.+|++++++++ ||||++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~ 96 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG 96 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred cccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence 46789999999999999999998 47999999987532 2377899999999886 777777
Q ss_pred EeEEEE-----------------e-------------CCeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHH
Q 002063 736 LYACLL-----------------K-------------GGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGA 785 (973)
Q Consensus 736 l~~~~~-----------------~-------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i 785 (973)
+.+++. . ++..|+||||+++|++.+.+.+ ..+++..+..++.|+
T Consensus 97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~------~~~~~~~~~~i~~qi 170 (336)
T 2vuw_A 97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT------KLSSLATAKSILHQL 170 (336)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT------TCCCHHHHHHHHHHH
T ss_pred hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh------cCCCHHHHHHHHHHH
Confidence 766543 2 6789999999999977666532 347899999999999
Q ss_pred HHHHhHhhhcCCCCeEecCCCCCCeeecCCC--------------------ceEEecccCCccccCCCCcccccccCccc
Q 002063 786 AKGIAYLHHDCSPPIIHRDIKSSNILLDEDY--------------------EPKIADFGVAKIAENSPKVSDYSCFAGTH 845 (973)
Q Consensus 786 a~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~--------------------~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~ 845 (973)
+.||+|||+ +++|+||||||+|||++.++ .+||+|||+++..... ...||+
T Consensus 171 ~~aL~~lH~--~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-------~~~gt~ 241 (336)
T 2vuw_A 171 TASLAVAEA--SLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-------IVVFCD 241 (336)
T ss_dssp HHHHHHHHH--HHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-------EEECCC
T ss_pred HHHHHHHHH--hCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-------cEEEee
Confidence 999999993 35899999999999999887 8999999999876532 246899
Q ss_pred ccccccccccCCCCccchHHHHHHH-HHHHHhCCCCCCcccCCCccHHHHHHHhhcccccchhhccccccChhhHHHHHH
Q 002063 846 GYIAPELAYTCKVSEKSDVFSFGVV-LLELVTGRKPVEEEYGDGKDIVYWVSTHLNNHENVLKVLDCEVASESIKEDMIK 924 (973)
Q Consensus 846 ~y~aPE~~~~~~~~~~~DvwslG~~-l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (973)
.|+|||++.+.. +.++||||+|++ .+++++|..||.... ...+......... .................
T Consensus 242 ~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~----~~~~~~~~~~~~~-----~~~~~~~~~~~~~~s~~ 311 (336)
T 2vuw_A 242 VSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVL----WLHYLTDKMLKQM-----TFKTKCNTPAMKQIKRK 311 (336)
T ss_dssp CTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHH----HHHHHHHHHHHTC-----CCSSCCCSHHHHHHHHH
T ss_pred cccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchh----hhhHHHHhhhhhh-----ccCcccchhhhhhcCHH
Confidence 999999998766 889999998777 778899999985320 0000011111000 01111222335567788
Q ss_pred HHHHHHHhcCCCCCCCCCHHHHH-HH
Q 002063 925 LLKIAVVCTTKLPNLRPPMREVV-KM 949 (973)
Q Consensus 925 l~~l~~~cl~~dP~~Rpt~~evl-~~ 949 (973)
+.+++.+||+.| |+.|++ +|
T Consensus 312 ~~dli~~~L~~d-----sa~e~l~~H 332 (336)
T 2vuw_A 312 IQEFHRTMLNFS-----SATDLLCQH 332 (336)
T ss_dssp HHHHHHHGGGSS-----SHHHHHHHC
T ss_pred HHHHHHHHhccC-----CHHHHHhcC
Confidence 999999999976 999998 65
No 295
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=6.6e-32 Score=299.19 Aligned_cols=274 Identities=19% Similarity=0.263 Sum_probs=121.1
Q ss_pred CCCeeeccccccccccchhhhccccccEEEeecccCCCCCCccccccccccEEEeeccccccccCCccCCCCCccEEEcc
Q 002063 218 ELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCF 297 (973)
Q Consensus 218 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 297 (973)
+|++|+|++|++++..+..|+++++|++|+|++|.+++..|..|.++++|++|++++|+++ .+|..+. ++|+.|+++
T Consensus 53 ~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~ 129 (330)
T 1xku_A 53 DTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVH 129 (330)
T ss_dssp TCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEECC
T ss_pred CCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEECC
Confidence 3444444444444333333444444444444444444333444444444444444444443 2333222 344444444
Q ss_pred cCCCCCCCCCCcCCccccceeeccccccCC--CCCccccccccccccccccccccccCChhhhhhhhHHHHHhhhccCCC
Q 002063 298 KNNFSGEFPSGFGDMRKLFAFSIYGNRFSG--PFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSG 375 (973)
Q Consensus 298 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~nn~~~ 375 (973)
+|.+.+..+..|..+++|+.|++++|.+.. ..+..+..+++|+.|++++|.++ .+|
T Consensus 130 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~--------------------- 187 (330)
T 1xku_A 130 ENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIP--------------------- 187 (330)
T ss_dssp SSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCC---------------------
T ss_pred CCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCC---------------------
Confidence 444443333334444444444444444421 33444455555555555555554 111
Q ss_pred CCCCcccCccccceEecccccccccCCccccCCCCcceEeccCCcCCCCCCCccCCCCCCCEEEcccCCCCCCCChhhhc
Q 002063 376 EVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGR 455 (973)
Q Consensus 376 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~ 455 (973)
..+. ++|++|+|++|++++..|..|..+++|+.|++++|++++..+..+..+++|++|+|++|+++ .+|..+..
T Consensus 188 ---~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~ 261 (330)
T 1xku_A 188 ---QGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLAD 261 (330)
T ss_dssp ---SSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTT
T ss_pred ---cccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhcc
Confidence 1111 45555666666555555555555555555555555554444444444444555555555444 34444444
Q ss_pred CCCCCEEecCCCcCCCCccccccccccCCEEEccCcccccCCCccccCccccchhhcccccccc--CCCccccccCCCCe
Q 002063 456 LTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSG--NIPRSLSLLSSLNA 533 (973)
Q Consensus 456 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~ 533 (973)
+++|++|+|++|++++..+..|.... .......|+.|++++|.+.. ..|..|..+.+++.
T Consensus 262 l~~L~~L~l~~N~i~~~~~~~f~~~~------------------~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~ 323 (330)
T 1xku_A 262 HKYIQVVYLHNNNISAIGSNDFCPPG------------------YNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAA 323 (330)
T ss_dssp CSSCCEEECCSSCCCCCCTTSSSCSS------------------CCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGG
T ss_pred CCCcCEEECCCCcCCccChhhcCCcc------------------cccccccccceEeecCcccccccCccccccccceeE
Confidence 44445555554444443333332210 00012444555555555532 34455666666666
Q ss_pred eecCCCc
Q 002063 534 LNLSGNK 540 (973)
Q Consensus 534 L~L~~N~ 540 (973)
++|++|+
T Consensus 324 l~L~~N~ 330 (330)
T 1xku_A 324 VQLGNYK 330 (330)
T ss_dssp EEC----
T ss_pred EEecccC
Confidence 6666663
No 296
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.98 E-value=2.2e-31 Score=295.06 Aligned_cols=284 Identities=20% Similarity=0.270 Sum_probs=247.6
Q ss_pred CCCCcceeeeCCC---------CCceEEEeecCCCCCccccccccCCCCCcEEeCCCCcccCccCccccCCCCCcEEEec
Q 002063 59 SPCGFSGITCDSV---------TGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVT 129 (973)
Q Consensus 59 ~~c~w~gv~C~~~---------~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~ 129 (973)
|.|.|+.+.|+.. ...++.|+|+++++++..+..++.+++|++|+|++|.+++..|..|+.+++|++|+|+
T Consensus 29 c~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 29 CQCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp CEEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CcCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 4579999999742 2468899999999998777789999999999999999998889999999999999999
Q ss_pred CCcccCCCCCcCCCCCCCEEeccCcccCCccccccccccccceEEccCCcCCCC-CCcccccCCCCCCEEEcccccCCCC
Q 002063 130 GNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEA-EIPESIGNLKNLTYLFLAHCNLRGR 208 (973)
Q Consensus 130 ~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-~ip~~~~~l~~L~~L~L~~n~l~~~ 208 (973)
+|.++..+..+. ++|++|++++|.+++..+..|.++++|++|++++|.+... ..+..+.++++|++|++++|+++.
T Consensus 109 ~n~l~~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~- 185 (330)
T 1xku_A 109 KNQLKELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT- 185 (330)
T ss_dssp SSCCSBCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-
T ss_pred CCcCCccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc-
Confidence 999998776654 7999999999999988888899999999999999988642 345678999999999999999994
Q ss_pred CChhhhccCCCCeeeccccccccccchhhhccccccEEEeecccCCCCCCccccccccccEEEeeccccccccCCccCCC
Q 002063 209 IPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNL 288 (973)
Q Consensus 209 ~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l 288 (973)
+|..+. ++|++|++++|++++..|..+..+++|++|+|++|.+++..+..+..+++|++|+|++|+++ .+|..+..+
T Consensus 186 l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l 262 (330)
T 1xku_A 186 IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADH 262 (330)
T ss_dssp CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTC
T ss_pred CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccC
Confidence 565544 89999999999999888899999999999999999999877778999999999999999998 889999999
Q ss_pred CCccEEEcccCCCCCCCCCCcCCc------cccceeeccccccCC--CCCcccccccccccccccccc
Q 002063 289 KNLTVFQCFKNNFSGEFPSGFGDM------RKLFAFSIYGNRFSG--PFPENLGRYTALTDVDISENQ 348 (973)
Q Consensus 289 ~~L~~L~l~~N~l~~~~p~~~~~l------~~L~~L~l~~N~l~~--~~~~~l~~l~~L~~L~Ls~N~ 348 (973)
++|++|++++|+|++..+..|... +.|+.|++++|.+.. ..|..|..+.+++.++|++|+
T Consensus 263 ~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 263 KYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp SSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred CCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 999999999999998777777543 788999999999863 667889999999999999985
No 297
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.98 E-value=1.3e-32 Score=301.63 Aligned_cols=250 Identities=29% Similarity=0.482 Sum_probs=125.8
Q ss_pred CCCCeeecccccccc--ccchhhhccccccEEEeec-ccCCCCCCccccccccccEEEeeccccccccCCccCCCCCccE
Q 002063 217 RELGTLDICRNKISG--EFPRSIRKLQKLWKIELYA-NNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTV 293 (973)
Q Consensus 217 ~~L~~L~L~~n~l~~--~~p~~l~~l~~L~~L~L~~-n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 293 (973)
.+++.|+|++|.+++ .+|..++++++|++|+|++ |.+++.+|..|.++++|++|+|++|++++.+|..+.++++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 356666666666666 5666666666666666663 6666666666666666666666666666666666666666666
Q ss_pred EEcccCCCCCCCCCCcCCccccceeeccccccCCCCCccccccccccccccccccccccCChhhhhhhhHHHHHhhhccC
Q 002063 294 FQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNF 373 (973)
Q Consensus 294 L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~nn~ 373 (973)
|++++|.+++.+|..++.+++|++|++++|++++.+|..+..++
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~------------------------------------ 173 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFS------------------------------------ 173 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCC------------------------------------
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhh------------------------------------
Confidence 66655555555555444444444444444444444444444333
Q ss_pred CCCCCCcccCccccceEecccccccccCCccccCCCCcceEeccCCcCCCCCCCccCCCCCCCEEEcccCCCCCCCChhh
Q 002063 374 SGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSEL 453 (973)
Q Consensus 374 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~ 453 (973)
++|++|+|++|++++.+|..|..+. |+.|++++|++++..+..+..+++|+.|+|++|++++.+|. +
T Consensus 174 -----------~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~ 240 (313)
T 1ogq_A 174 -----------KLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-V 240 (313)
T ss_dssp -----------TTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-C
T ss_pred -----------hcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-c
Confidence 1444444444444444444443332 33333333333332223333333444444444444433222 3
Q ss_pred hcCCCCCEEecCCCcCCCCccccccccccCCEEEccCcccccCCCccccCccccchhhccccc
Q 002063 454 GRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNS 516 (973)
Q Consensus 454 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 516 (973)
..+++|++|+|++|++++.+|..+..+++|++|+|++|++++.+|.. +.+++|+.|++++|.
T Consensus 241 ~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 241 GLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNK 302 (313)
T ss_dssp CCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSS
T ss_pred cccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCC
Confidence 34444444444444444444444444444555555555444444443 444444444444443
No 298
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.98 E-value=5.1e-36 Score=348.92 Aligned_cols=386 Identities=18% Similarity=0.198 Sum_probs=187.9
Q ss_pred CCCcEEEecCCcccCCCC-C-cCCCCCCCEEeccCcccCC----ccccccccccccceEEccCCcCCCCCCcccccCCC-
Q 002063 121 SNLKVLNVTGNAMVGSVP-D-LSALKNLEIFDLSINYFTG----RFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLK- 193 (973)
Q Consensus 121 ~~L~~L~L~~n~l~~~~~-~-l~~l~~L~~L~Ls~n~l~~----~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~- 193 (973)
++|++|+|++|+++.... . +..+++|++|+|++|.+++ .++..+..+++|++|++++|.++...+......++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 456777777777654332 2 5666777777777777664 23455555666666666666654322222223344
Q ss_pred ---CCCEEEcccccCCC----CCChhhhccCCCCeeeccccccccccchhhhc-----cccccEEEeecccCCCCC----
Q 002063 194 ---NLTYLFLAHCNLRG----RIPESISELRELGTLDICRNKISGEFPRSIRK-----LQKLWKIELYANNLTGEL---- 257 (973)
Q Consensus 194 ---~L~~L~L~~n~l~~----~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~-----l~~L~~L~L~~n~l~~~~---- 257 (973)
+|++|+|++|+++. .++..+..+++|++|+|++|++++..+..+.. .++|++|+|++|++++..
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 162 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL 162 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHH
Confidence 46666666666663 33555666666666666666665444443332 234555555555555422
Q ss_pred CccccccccccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCc-CCccccceeeccccccCCC----CCcc
Q 002063 258 PAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGF-GDMRKLFAFSIYGNRFSGP----FPEN 332 (973)
Q Consensus 258 ~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~-~~l~~L~~L~l~~N~l~~~----~~~~ 332 (973)
+..+..+++|++|++++|.+.+..+..+.. .+ ..+++|+.|++++|.+++. ++..
T Consensus 163 ~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~--------------------~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 222 (461)
T 1z7x_W 163 ASVLRAKPDFKELTVSNNDINEAGVRVLCQ--------------------GLKDSPCQLEALKLESCGVTSDNCRDLCGI 222 (461)
T ss_dssp HHHHHHCTTCCEEECCSSBCHHHHHHHHHH--------------------HHHHSCCCCCEEECTTSCCBTTHHHHHHHH
T ss_pred HHHHhhCCCCCEEECcCCCcchHHHHHHHH--------------------HHhcCCCCceEEEccCCCCcHHHHHHHHHH
Confidence 233344455555555555554332222221 00 0122334444444444332 2444
Q ss_pred ccccccccccccccccccccCChhhhhhhhHHHHHhhhccCCCCCCCcccCccccceEeccccccccc----CCccccCC
Q 002063 333 LGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGK----IPDGLWAL 408 (973)
Q Consensus 333 l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l 408 (973)
+..+++|++|++++|.+++.....++. ..+..+++|++|+|++|.+++. ++..+..+
T Consensus 223 l~~~~~L~~L~Ls~n~l~~~~~~~l~~-------------------~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~ 283 (461)
T 1z7x_W 223 VASKASLRELALGSNKLGDVGMAELCP-------------------GLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAK 283 (461)
T ss_dssp HHHCTTCCEEECCSSBCHHHHHHHHHH-------------------HHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHC
T ss_pred HHhCCCccEEeccCCcCChHHHHHHHH-------------------HHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhC
Confidence 455555666666666555321111110 0112345566666666665532 33444334
Q ss_pred CCcceEeccCCcCCCCCCCccCCCCCCCEEEcccCCCCCCCChhhhcC-----CCCCEEecCCCcCCCC----ccccccc
Q 002063 409 PNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRL-----TNLERLILTNNNFSGK----IPSALGA 479 (973)
Q Consensus 409 ~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~----~p~~~~~ 479 (973)
++|+.|++++|. +.+..+..+... ++|+.|+|++|.+++. ++..+..
T Consensus 284 ~~L~~L~Ls~n~------------------------i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~ 339 (461)
T 1z7x_W 284 ESLKELSLAGNE------------------------LGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQ 339 (461)
T ss_dssp TTCCEEECTTCC------------------------CHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHH
T ss_pred CCcceEECCCCC------------------------CchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhh
Confidence 444444444444 332222222211 3445555555544432 2334444
Q ss_pred cccCCEEEccCcccccCCCccccC-----ccccchhhcccccccc----CCCccccccCCCCeeecCCCccCCCCCchhh
Q 002063 480 LRQLSSLHLEENALTGSIPNEMGD-----CARIVDLNLARNSLSG----NIPRSLSLLSSLNALNLSGNKLTGSIPDNLM 550 (973)
Q Consensus 480 l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 550 (973)
+++|++|+|++|++++..+..+.. .++|+.|+|++|.+++ .+|..+..+++|++|+|++|++++.-...+.
T Consensus 340 ~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~~~~~l~ 419 (461)
T 1z7x_W 340 NRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLV 419 (461)
T ss_dssp CSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHH
T ss_pred CCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHHHHHHHH
Confidence 455555555555554333332221 3455555555555554 4555566666666666666666532111111
Q ss_pred ----c--ccCceEEccCCccccccC
Q 002063 551 ----K--LKLSSIDLSENQLSGSVP 569 (973)
Q Consensus 551 ----~--l~L~~l~ls~N~l~~~~p 569 (973)
. ..|+.|++.+|.+...++
T Consensus 420 ~~l~~~~~~L~~L~~~~~~~~~~~~ 444 (461)
T 1z7x_W 420 ESVRQPGCLLEQLVLYDIYWSEEME 444 (461)
T ss_dssp HHHTSTTCCCCEEECTTCCCCHHHH
T ss_pred HHhccCCcchhheeecccccCHHHH
Confidence 1 126666666666655444
No 299
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=2.8e-35 Score=342.66 Aligned_cols=260 Identities=18% Similarity=0.225 Sum_probs=136.7
Q ss_pred ceEEEeecCCCCCcccccc-ccCCCCCcEEeCCCCcccC----ccCccccCCCCCcEEEecCCcccCCCC-C-cCCCC--
Q 002063 74 RVTEISFDNKSLSGEISSS-ISALQSLTVLSLPFNVLSG----KLPLELSNCSNLKVLNVTGNAMVGSVP-D-LSALK-- 144 (973)
Q Consensus 74 ~v~~l~l~~~~l~~~~~~~-l~~l~~L~~L~Ls~n~l~~----~~p~~l~~l~~L~~L~L~~n~l~~~~~-~-l~~l~-- 144 (973)
+++.|+|++++++...... +..+++|++|+|++|++++ .++..+..+++|++|+|++|.+..... . ...++
T Consensus 4 ~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~ 83 (461)
T 1z7x_W 4 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 83 (461)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred cceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhC
Confidence 5677777777776544433 6667777777777777764 345566667777777777777654221 1 22233
Q ss_pred --CCCEEeccCcccCC----ccccccccccccceEEccCCcCCCCCCc---cc-ccCCCCCCEEEcccccCCCCC----C
Q 002063 145 --NLEIFDLSINYFTG----RFPRWVVNLTQLVSLSIGDNVYDEAEIP---ES-IGNLKNLTYLFLAHCNLRGRI----P 210 (973)
Q Consensus 145 --~L~~L~Ls~n~l~~----~~~~~~~~l~~L~~L~l~~n~l~~~~ip---~~-~~~l~~L~~L~L~~n~l~~~~----p 210 (973)
+|++|+|++|.++. .++..+..+++|++|++++|.++...+. .. ....++|++|+|++|++++.. +
T Consensus 84 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~ 163 (461)
T 1z7x_W 84 SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLA 163 (461)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHH
T ss_pred CCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHH
Confidence 57777777777663 3456666666666666666655422111 11 112345666666666665422 3
Q ss_pred hhhhccCCCCeeeccccccccccchhhhc-----cccccEEEeecccCCCC----CCccccccccccEEEeecccccccc
Q 002063 211 ESISELRELGTLDICRNKISGEFPRSIRK-----LQKLWKIELYANNLTGE----LPAELGNLTLLQEFDISSNQMYGKL 281 (973)
Q Consensus 211 ~~l~~l~~L~~L~L~~n~l~~~~p~~l~~-----l~~L~~L~L~~n~l~~~----~~~~l~~l~~L~~L~Ls~N~l~~~~ 281 (973)
..+..+++|++|++++|.+++..+..+.. .++|++|+|++|.+++. ++..+..+++|++|++++|.+.+..
T Consensus 164 ~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~ 243 (461)
T 1z7x_W 164 SVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVG 243 (461)
T ss_dssp HHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHH
T ss_pred HHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHH
Confidence 34445566666666666655443333332 33555555555555532 2334444455555555555544321
Q ss_pred CCccCCCCCccEEEcccCCCCCCCCCCcCCccccceeeccccccCCC----CCcccccccccccccccccccccc
Q 002063 282 PEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGP----FPENLGRYTALTDVDISENQFSGS 352 (973)
Q Consensus 282 p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~----~~~~l~~l~~L~~L~Ls~N~l~~~ 352 (973)
...+. +..+..+++|+.|++++|.+++. ++..+..+++|++|+|++|.+++.
T Consensus 244 ~~~l~-------------------~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~ 299 (461)
T 1z7x_W 244 MAELC-------------------PGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDE 299 (461)
T ss_dssp HHHHH-------------------HHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHH
T ss_pred HHHHH-------------------HHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchH
Confidence 11000 11112234444444444444422 344455566666666666666543
No 300
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=2e-30 Score=284.11 Aligned_cols=254 Identities=21% Similarity=0.244 Sum_probs=172.9
Q ss_pred CCCCCcceeeeCCCCCceEEEeecCCCCCccccccccCCCCCcEEeCCCCcccCccCccccCCCCCcEEEecCCcccCC-
Q 002063 58 DSPCGFSGITCDSVTGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGS- 136 (973)
Q Consensus 58 ~~~c~w~gv~C~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~- 136 (973)
.|.|.|.+|.|+.. +++ .+|..+. ++|++|+|++|+++...+..|+++++|++|+|++|.+...
T Consensus 4 ~C~C~~~~l~c~~~------------~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~ 68 (306)
T 2z66_A 4 RCSCSGTEIRCNSK------------GLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKG 68 (306)
T ss_dssp TCEEETTEEECCSS------------CCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEE
T ss_pred CCeeCCCEEEcCCC------------Ccc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCccc
Confidence 35589999999742 222 3344332 5788888888888844444578888888888888887644
Q ss_pred --CCCcCCCCCCCEEeccCcccCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccccCCCCCChhhh
Q 002063 137 --VPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESIS 214 (973)
Q Consensus 137 --~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~ 214 (973)
+..+..+++|++|+|++|.++ .+|..+..+++|++|++++|.++....+..+..+++|++|++++|.+++..+..+.
T Consensus 69 ~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 147 (306)
T 2z66_A 69 CCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFN 147 (306)
T ss_dssp EEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTT
T ss_pred CcccccccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcc
Confidence 234566778888888888777 45666777777777777777776443224567777777777777777766677777
Q ss_pred ccCCCCeeecccccccc-ccchhhhccccccEEEeecccCCCCCCccccccccccEEEeeccccccccCCccCCCCCccE
Q 002063 215 ELRELGTLDICRNKISG-EFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTV 293 (973)
Q Consensus 215 ~l~~L~~L~L~~n~l~~-~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 293 (973)
.+++|++|++++|++++ ..|..+..+++|++|+|++|++++..|..+..+++|++|+|++|++++..+..+..+++|+.
T Consensus 148 ~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 227 (306)
T 2z66_A 148 GLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQV 227 (306)
T ss_dssp TCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCE
T ss_pred cCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCE
Confidence 77777777777777765 45666666777777777777776655666666667777777777766555555666666666
Q ss_pred EEcccCCCCCCCCCCcCCcc-ccceeeccccccCC
Q 002063 294 FQCFKNNFSGEFPSGFGDMR-KLFAFSIYGNRFSG 327 (973)
Q Consensus 294 L~l~~N~l~~~~p~~~~~l~-~L~~L~l~~N~l~~ 327 (973)
|++++|++.+..|..+..++ +|+.|++++|++++
T Consensus 228 L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 228 LDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 262 (306)
T ss_dssp EECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEEC
T ss_pred eECCCCCCcccCHHHHHhhhccCCEEEccCCCeec
Confidence 66666666666666666653 66666666666654
No 301
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.97 E-value=6.3e-33 Score=333.68 Aligned_cols=431 Identities=13% Similarity=0.104 Sum_probs=219.2
Q ss_pred CCCcceeeeCCCCCceEEEeecCCCCCccccccccCCCCCcEEeCCCCcc---cCccCcccc------------CCCCCc
Q 002063 60 PCGFSGITCDSVTGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVL---SGKLPLELS------------NCSNLK 124 (973)
Q Consensus 60 ~c~w~gv~C~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l---~~~~p~~l~------------~l~~L~ 124 (973)
|++|.++.+.. .+ .+.+.+ ......+..+..+++|++|+|+++.. .+.+|..++ .+++|+
T Consensus 41 ck~W~~~~~~~--~~--~l~~~~-~~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~ 115 (592)
T 3ogk_B 41 CRRWFKIDSET--RE--HVTMAL-CYTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLK 115 (592)
T ss_dssp CHHHHHHHHHH--CC--EEEESC-GGGSCHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCC
T ss_pred hHHHHHhhhcc--cc--EEEEee-ccccChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCC
Confidence 45899996532 22 222222 22333444566777888888876432 133343322 445555
Q ss_pred EEEecCCcccCCCCCcCCCCCCCEEeccCcccCCccccccccc--cccceEEccCCc-CCCCCCcccccCCCCCCEEEcc
Q 002063 125 VLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNL--TQLVSLSIGDNV-YDEAEIPESIGNLKNLTYLFLA 201 (973)
Q Consensus 125 ~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l--~~L~~L~l~~n~-l~~~~ip~~~~~l~~L~~L~L~ 201 (973)
+|+|++|. +++..+..+... .+|++|++++|. ++...++..+.++++|++|+|+
T Consensus 116 ~L~L~~~~-----------------------i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~ 172 (592)
T 3ogk_B 116 SVHFRRMI-----------------------VSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLME 172 (592)
T ss_dssp EEEEESCB-----------------------CCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECT
T ss_pred eEEeeccE-----------------------ecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECc
Confidence 55555554 443333333332 224444444443 1111122222344555555555
Q ss_pred cccCCCC----CChhhhccCCCCeeeccccccc----cccchhhhccccccEEEeecccCCCCCCccccccccccEEEee
Q 002063 202 HCNLRGR----IPESISELRELGTLDICRNKIS----GEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDIS 273 (973)
Q Consensus 202 ~n~l~~~----~p~~l~~l~~L~~L~L~~n~l~----~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls 273 (973)
+|.+++. ++..+..+++|++|++++|.++ +.++..+.++++|++|++++|.+.+ ++..+.++++|++|+++
T Consensus 173 ~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~ 251 (592)
T 3ogk_B 173 ESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGG 251 (592)
T ss_dssp TCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEEC
T ss_pred cccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhccc
Confidence 5554433 2223344455555555555554 2233334445555555555555542 34445555555555554
Q ss_pred ccccc---cccCCccCCCCCccEEEcccCCCCCCCCCCcCCccccceeeccccccCCCCC-ccccccccccccccccccc
Q 002063 274 SNQMY---GKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFP-ENLGRYTALTDVDISENQF 349 (973)
Q Consensus 274 ~N~l~---~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~l~~l~~L~~L~Ls~N~l 349 (973)
.+... +..+..+..+++|+.|+++++. .+.+|..+..+++|++|++++|.+++... ..+..+++|++|+++ +.+
T Consensus 252 ~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~-~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~ 329 (592)
T 3ogk_B 252 SLNEDIGMPEKYMNLVFPRKLCRLGLSYMG-PNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVI 329 (592)
T ss_dssp BCCCCTTCTTSSSCCCCCTTCCEEEETTCC-TTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGG
T ss_pred ccccccchHHHHHHhhccccccccCccccc-hhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-Ccc
Confidence 32211 1223344445555555555432 22344445555555555555555443222 224555666666666 333
Q ss_pred cccCChhhhhhhhHHHHHhhhccCCCCCCCcccCccccceEecc-----------cccccccC-CccccCCCCcceEecc
Q 002063 350 SGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRIS-----------DNHLSGKI-PDGLWALPNVGMLDFG 417 (973)
Q Consensus 350 ~~~~p~~~~~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~Ls-----------~N~l~~~~-p~~~~~l~~L~~L~L~ 417 (973)
.+... +..+..+++|++|+|+ .|.+++.. +..+..+++|++|+++
T Consensus 330 ~~~~l-----------------------~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~ 386 (592)
T 3ogk_B 330 GDRGL-----------------------EVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVY 386 (592)
T ss_dssp HHHHH-----------------------HHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEE
T ss_pred CHHHH-----------------------HHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEee
Confidence 31110 0111234556666666 24444321 1223345666666666
Q ss_pred CCcCCCCCCCccCC-CCCCCEEEcc----cCCCCCC-----CChhhhcCCCCCEEecCCCc--CCCCccccccc-cccCC
Q 002063 418 DNDFTGGISPLIGL-STSLSQLVLQ----NNRFSGE-----LPSELGRLTNLERLILTNNN--FSGKIPSALGA-LRQLS 484 (973)
Q Consensus 418 ~N~l~~~~~~~~~~-~~~L~~L~L~----~N~l~~~-----~p~~~~~l~~L~~L~L~~N~--l~~~~p~~~~~-l~~L~ 484 (973)
.|++++.....+.. +++|+.|+|+ .|.+++. ++..+.++++|+.|+|++|. +++..+..+.. +++|+
T Consensus 387 ~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~ 466 (592)
T 3ogk_B 387 VSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVR 466 (592)
T ss_dssp ESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCC
T ss_pred cCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccce
Confidence 66665544333333 5667777775 5666643 23335667778888876433 55444444433 67788
Q ss_pred EEEccCccccc-CCCccccCccccchhhccccccccC-CCccccccCCCCeeecCCCccCCC
Q 002063 485 SLHLEENALTG-SIPNEMGDCARIVDLNLARNSLSGN-IPRSLSLLSSLNALNLSGNKLTGS 544 (973)
Q Consensus 485 ~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~ 544 (973)
+|+|++|++++ .++..+.++++|+.|+|++|.+++. ++..+..+++|+.|+|++|++++.
T Consensus 467 ~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 467 WMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp EEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTT
T ss_pred EeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHH
Confidence 88888887765 2344456777788888888877644 334445678888888888887754
No 302
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.97 E-value=2.1e-31 Score=293.82 Aligned_cols=288 Identities=18% Similarity=0.245 Sum_probs=208.5
Q ss_pred HHHHHHH-HHHHhcCCCcccccCCCCCC-CCCCCcceeeeCCCC--CceEEEeecCCCCCccccccc--cCCCCCcEEeC
Q 002063 31 VETQALI-QFKSKLKDPHGVLDSWKESA-DSPCGFSGITCDSVT--GRVTEISFDNKSLSGEISSSI--SALQSLTVLSL 104 (973)
Q Consensus 31 ~~~~aLl-~~k~~~~d~~~~l~~W~~~~-~~~c~w~gv~C~~~~--~~v~~l~l~~~~l~~~~~~~l--~~l~~L~~L~L 104 (973)
..+++.. +.|.++.|+..++..|...- .++|.|.++-|.... ..+.. ..+.... .++..+ ...+++++|+|
T Consensus 12 ~~~~~~~~~~~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~--~~g~~~~-~~~~~l~~~~~~~l~~L~L 88 (328)
T 4fcg_A 12 SGRENLYFQGSTALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIET--RTGRALK-ATADLLEDATQPGRVALEL 88 (328)
T ss_dssp -----CCCC--CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCC--SHHHHHH-HHHHHHHHHTSTTCCEEEE
T ss_pred ccccceeeeccccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccc--cCCcchh-hhHHHHhcccccceeEEEc
Confidence 3444442 33455678888899997532 357999998883221 11111 1110000 111111 12355566666
Q ss_pred CCCcccCccCccccCCCCCcEEEecCCcccCCCCCcCCCCCCCEEeccCcccCCccccccccccccceEEccCCcCCCCC
Q 002063 105 PFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAE 184 (973)
Q Consensus 105 s~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 184 (973)
++|+++ .+|..++++++|++|+|++|.+...+..++.+++|++|+|++|.++ .
T Consensus 89 ~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~Ls~n~l~--------------------------~ 141 (328)
T 4fcg_A 89 RSVPLP-QFPDQAFRLSHLQHMTIDAAGLMELPDTMQQFAGLETLTLARNPLR--------------------------A 141 (328)
T ss_dssp ESSCCS-SCCSCGGGGTTCSEEEEESSCCCCCCSCGGGGTTCSEEEEESCCCC--------------------------C
T ss_pred cCCCch-hcChhhhhCCCCCEEECCCCCccchhHHHhccCCCCEEECCCCccc--------------------------c
Confidence 666665 4555555555555555555555543334555555555555555444 4
Q ss_pred CcccccCCCCCCEEEcccccCCCCCChhhh---------ccCCCCeeeccccccccccchhhhccccccEEEeecccCCC
Q 002063 185 IPESIGNLKNLTYLFLAHCNLRGRIPESIS---------ELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTG 255 (973)
Q Consensus 185 ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~---------~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~ 255 (973)
+|..++++++|++|+|++|++.+.+|..+. .+++|++|+|++|+++ .+|..++.+++|++|+|++|.+++
T Consensus 142 lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~ 220 (328)
T 4fcg_A 142 LPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA 220 (328)
T ss_dssp CCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC
T ss_pred CcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc
Confidence 566666777777777777776667776655 4999999999999999 889999999999999999999994
Q ss_pred CCCccccccccccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCccccceeeccccccCCCCCccccc
Q 002063 256 ELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGR 335 (973)
Q Consensus 256 ~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~ 335 (973)
+|..+..+++|++|+|++|.+.+.+|..++.+++|+.|++++|++.+.+|..++.+++|+.|++++|++.+.+|..++.
T Consensus 221 -l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~ 299 (328)
T 4fcg_A 221 -LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQ 299 (328)
T ss_dssp -CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGG
T ss_pred -CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhh
Confidence 6778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccccccc
Q 002063 336 YTALTDVDISENQFS 350 (973)
Q Consensus 336 l~~L~~L~Ls~N~l~ 350 (973)
+++|+.+++..|.+.
T Consensus 300 L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 300 LPANCIILVPPHLQA 314 (328)
T ss_dssp SCTTCEEECCGGGSC
T ss_pred ccCceEEeCCHHHHH
Confidence 999999999988776
No 303
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=1.6e-30 Score=290.87 Aligned_cols=281 Identities=20% Similarity=0.275 Sum_probs=237.9
Q ss_pred CCCCCcceeeeCCCCCceEEEeecCCCCCccccccccCCCCCcEEeCCCCcccCccCccccCCCCCcEEEecCCcccCCC
Q 002063 58 DSPCGFSGITCDSVTGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSV 137 (973)
Q Consensus 58 ~~~c~w~gv~C~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~ 137 (973)
.++|.|.|+ |+ +++++++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|.+.+.+
T Consensus 27 ~~~C~~~~~-c~----------~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 92 (353)
T 2z80_A 27 SLSCDRNGI-CK----------GSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIE 92 (353)
T ss_dssp CCEECTTSE-EE----------CCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEEC
T ss_pred CCCCCCCeE-ee----------CCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccC
Confidence 456999988 74 3456666 5666554 58999999999999766668999999999999999999887
Q ss_pred C-CcCCCCCCCEEeccCcccCCccccccccccccceEEccCCcCCCCCCcc--cccCCCCCCEEEcccc-cCCCCCChhh
Q 002063 138 P-DLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPE--SIGNLKNLTYLFLAHC-NLRGRIPESI 213 (973)
Q Consensus 138 ~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~--~~~~l~~L~~L~L~~n-~l~~~~p~~l 213 (973)
+ .|+++++|++|+|++|.+++..+..|.++++|++|++++|.++. +|. .+.++++|++|++++| .+++..+..+
T Consensus 93 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~--l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~ 170 (353)
T 2z80_A 93 EDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKT--LGETSLFSHLTKLQILRVGNMDTFTKIQRKDF 170 (353)
T ss_dssp TTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSS--SCSSCSCTTCTTCCEEEEEESSSCCEECTTTT
T ss_pred HhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcc--cCchhhhccCCCCcEEECCCCccccccCHHHc
Confidence 6 49999999999999999997777779999999999999999974 555 7899999999999999 5776777889
Q ss_pred hccCCCCeeeccccccccccchhhhccccccEEEeecccCCCCCCccccccccccEEEeeccccccccCCccC---CCCC
Q 002063 214 SELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIG---NLKN 290 (973)
Q Consensus 214 ~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~---~l~~ 290 (973)
..+++|++|++++|++++..|..+..+++|++|++++|.++...+..+..+++|++|++++|.+++..+..+. ....
T Consensus 171 ~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~ 250 (353)
T 2z80_A 171 AGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSL 250 (353)
T ss_dssp TTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCC
T ss_pred cCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccch
Confidence 9999999999999999988899999999999999999999844434455689999999999999976655543 3567
Q ss_pred ccEEEcccCCCCC----CCCCCcCCccccceeeccccccCCCCCccccccccccccccccccccccCC
Q 002063 291 LTVFQCFKNNFSG----EFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFP 354 (973)
Q Consensus 291 L~~L~l~~N~l~~----~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p 354 (973)
++.+++.++.+++ .+|..+..+++|+.|++++|+++...+..|..+++|++|+|++|++.+..|
T Consensus 251 l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 251 IKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp CCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred hhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 8899999999886 467778899999999999999995444446999999999999999996554
No 304
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=4.2e-33 Score=335.16 Aligned_cols=421 Identities=10% Similarity=0.025 Sum_probs=240.2
Q ss_pred CceEEEeecCCCC---Ccccccccc------------CCCCCcEEeCCCCcccCccCccccCC--CCCcEEEecCCcc-c
Q 002063 73 GRVTEISFDNKSL---SGEISSSIS------------ALQSLTVLSLPFNVLSGKLPLELSNC--SNLKVLNVTGNAM-V 134 (973)
Q Consensus 73 ~~v~~l~l~~~~l---~~~~~~~l~------------~l~~L~~L~Ls~n~l~~~~p~~l~~l--~~L~~L~L~~n~l-~ 134 (973)
+++..|+|+++.. .+.+|...+ .+++|++|+|++|.+++..+..++.. .+|++|+|++|.- .
T Consensus 73 ~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~ 152 (592)
T 3ogk_B 73 PNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFT 152 (592)
T ss_dssp TTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEE
T ss_pred CCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcC
Confidence 4588999976421 123332222 78999999999999988777777774 4599999999872 1
Q ss_pred C-CCC-CcCCCCCCCEEeccCcccCCc----cccccccccccceEEccCCcCCC---CCCcccccCCCCCCEEEcccccC
Q 002063 135 G-SVP-DLSALKNLEIFDLSINYFTGR----FPRWVVNLTQLVSLSIGDNVYDE---AEIPESIGNLKNLTYLFLAHCNL 205 (973)
Q Consensus 135 ~-~~~-~l~~l~~L~~L~Ls~n~l~~~----~~~~~~~l~~L~~L~l~~n~l~~---~~ip~~~~~l~~L~~L~L~~n~l 205 (973)
. ..+ ...++++|++|+|++|.+++. ++..+..+++|++|++++|.++. ..++..+.++++|++|++++|.+
T Consensus 153 ~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~ 232 (592)
T 3ogk_B 153 TDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEI 232 (592)
T ss_dssp HHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBG
T ss_pred HHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccH
Confidence 1 111 134678888888888887655 33334455666666666665541 12233344455555555555555
Q ss_pred CCCCChhhhccCCCCeeeccccccccccchhhhccccccEEEeecccCCCCCCccccccccccEEEeeccccccccCCcc
Q 002063 206 RGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEI 285 (973)
Q Consensus 206 ~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~ 285 (973)
.+ +|..+..+++|++|+++.+...... +..+..+..+++|+.|+++++.. +.+|..+
T Consensus 233 ~~-l~~~~~~~~~L~~L~l~~~~~~~~~---------------------~~~~~~l~~~~~L~~L~l~~~~~-~~l~~~~ 289 (592)
T 3ogk_B 233 LE-LVGFFKAAANLEEFCGGSLNEDIGM---------------------PEKYMNLVFPRKLCRLGLSYMGP-NEMPILF 289 (592)
T ss_dssp GG-GHHHHHHCTTCCEEEECBCCCCTTC---------------------TTSSSCCCCCTTCCEEEETTCCT-TTGGGGG
T ss_pred HH-HHHHHhhhhHHHhhcccccccccch---------------------HHHHHHhhccccccccCccccch-hHHHHHH
Confidence 53 4445555555555555432221000 12223344444555555544322 2344444
Q ss_pred CCCCCccEEEcccCCCCCCCC-CCcCCccccceeeccccccCCCCCcccccccccccccccc-----------ccccccC
Q 002063 286 GNLKNLTVFQCFKNNFSGEFP-SGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISE-----------NQFSGSF 353 (973)
Q Consensus 286 ~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~-----------N~l~~~~ 353 (973)
..+++|+.|++++|.+++... ..+..+++|+.|+++++...+.++.....+++|++|+|++ |.+++..
T Consensus 290 ~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~ 369 (592)
T 3ogk_B 290 PFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRG 369 (592)
T ss_dssp GGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHH
T ss_pred hhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHH
Confidence 445555555555554433222 1234455555555552221122223334556666666662 4444211
Q ss_pred ChhhhhhhhHHHHHhhhccCCCCCCCcccCccccceEecccccccccCCccccC-CCCcceEecc----CCcCCCCCC--
Q 002063 354 PKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWA-LPNVGMLDFG----DNDFTGGIS-- 426 (973)
Q Consensus 354 p~~~~~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~L~----~N~l~~~~~-- 426 (973)
.. .....+++|++|+++.|.+++..+..+.. +++|+.|+++ .|.+++.+.
T Consensus 370 ~~-----------------------~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~ 426 (592)
T 3ogk_B 370 LI-----------------------ALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDN 426 (592)
T ss_dssp HH-----------------------HHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHH
T ss_pred HH-----------------------HHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHH
Confidence 00 01223567777777777776655555554 6777777775 556665422
Q ss_pred ---CccCCCCCCCEEEcccC--CCCCCCChhhhc-CCCCCEEecCCCcCCC-CccccccccccCCEEEccCcccccC-CC
Q 002063 427 ---PLIGLSTSLSQLVLQNN--RFSGELPSELGR-LTNLERLILTNNNFSG-KIPSALGALRQLSSLHLEENALTGS-IP 498 (973)
Q Consensus 427 ---~~~~~~~~L~~L~L~~N--~l~~~~p~~~~~-l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~-~p 498 (973)
..+..+++|++|+|++| .+++..+..+.. +++|++|+|++|++++ .++..+.++++|++|+|++|.+++. ++
T Consensus 427 ~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~ 506 (592)
T 3ogk_B 427 GVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIA 506 (592)
T ss_dssp HHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHH
T ss_pred HHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHH
Confidence 22455778888888643 355555555543 7788888888888875 3455567788888888888887644 33
Q ss_pred ccccCccccchhhccccccccCCCccc-cccCCCCeeecCCC
Q 002063 499 NEMGDCARIVDLNLARNSLSGNIPRSL-SLLSSLNALNLSGN 539 (973)
Q Consensus 499 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~L~~N 539 (973)
..+..+++|+.|+|++|+++..-...+ ..++.++...+..+
T Consensus 507 ~~~~~l~~L~~L~ls~n~it~~~~~~l~~~~p~l~~~~~~~~ 548 (592)
T 3ogk_B 507 AAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSR 548 (592)
T ss_dssp HHHHHCSSCCEEEEESCBCCTTCTTGGGGCCTTEEEEEECCC
T ss_pred HHHHhcCccCeeECcCCcCCHHHHHHHHHhCCCcEEEEecCc
Confidence 444567888888888888875533333 35666666655554
No 305
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=1.4e-29 Score=277.32 Aligned_cols=185 Identities=20% Similarity=0.270 Sum_probs=106.6
Q ss_pred cccceEecccccccccCCccccCCCCcceEeccCCcCCCCCC-CccCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEe
Q 002063 385 KTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGIS-PLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLI 463 (973)
Q Consensus 385 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 463 (973)
++|++|+|++|.+. .+|..+..+++|+.|++++|++++... ..+..+++|++|++++|.+.+..+..+..+++|++|+
T Consensus 78 ~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 156 (306)
T 2z66_A 78 TSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLK 156 (306)
T ss_dssp SCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEE
T ss_pred cccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEE
Confidence 34444444444444 233334444444444444444444433 3445555566666666666555555566666666666
Q ss_pred cCCCcCCC-CccccccccccCCEEEccCcccccCCCccccCccccchhhccccccccCCCccccccCCCCeeecCCCccC
Q 002063 464 LTNNNFSG-KIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLT 542 (973)
Q Consensus 464 L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 542 (973)
|++|.+++ ..|..+..+++|++|+|++|++++..|..+..+++|+.|+|++|++++..+..+..+++|+.|+|++|+++
T Consensus 157 l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 236 (306)
T 2z66_A 157 MAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIM 236 (306)
T ss_dssp CTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCC
T ss_pred CCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCc
Confidence 66666654 35556666666666666666666655666666666666666666666555555666666666666666666
Q ss_pred CCCCchhhcc--cCceEEccCCccccccCc
Q 002063 543 GSIPDNLMKL--KLSSIDLSENQLSGSVPL 570 (973)
Q Consensus 543 ~~~p~~~~~l--~L~~l~ls~N~l~~~~p~ 570 (973)
+.+|..+..+ .|+.|+|++|+|+|.++.
T Consensus 237 ~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~ 266 (306)
T 2z66_A 237 TSKKQELQHFPSSLAFLNLTQNDFACTCEH 266 (306)
T ss_dssp BCSSSSCCCCCTTCCEEECTTCCEECSGGG
T ss_pred ccCHHHHHhhhccCCEEEccCCCeecccCh
Confidence 6666666554 266666666666666653
No 306
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=1.1e-29 Score=284.22 Aligned_cols=280 Identities=18% Similarity=0.215 Sum_probs=164.2
Q ss_pred cccccEEEeecccCCCCCCccccccccccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCccccceee
Q 002063 240 LQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFS 319 (973)
Q Consensus 240 l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 319 (973)
++.....++++|.++ .+|..+. ++|++|++++|++++..+..+.++++|+.|++++|++++..|..|+.+++|++|+
T Consensus 30 C~~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (353)
T 2z80_A 30 CDRNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLD 106 (353)
T ss_dssp ECTTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEE
Confidence 344445666666666 4555443 3666677777766655444666666666666666666665555666666666666
Q ss_pred ccccccCCCCCccccccccccccccccccccccCChhhhhhhhHHHHHhhhccCCCCCCCcccCccccceEecccc-ccc
Q 002063 320 IYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDN-HLS 398 (973)
Q Consensus 320 l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~Ls~N-~l~ 398 (973)
+++|++++..+..++.+++|++|+|++|++++ +|. ...+..+++|++|++++| .+.
T Consensus 107 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-l~~----------------------~~~~~~l~~L~~L~l~~n~~~~ 163 (353)
T 2z80_A 107 LSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKT-LGE----------------------TSLFSHLTKLQILRVGNMDTFT 163 (353)
T ss_dssp CCSSCCSSCCHHHHTTCTTCSEEECTTCCCSS-SCS----------------------SCSCTTCTTCCEEEEEESSSCC
T ss_pred CCCCcCCcCCHhHhCCCccCCEEECCCCCCcc-cCc----------------------hhhhccCCCCcEEECCCCcccc
Confidence 66666664444445555555555555555541 110 013444555555555555 344
Q ss_pred ccCCccccCCCCcceEeccCCcCCCCCCCccCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEecCCCcCCCCcccccc
Q 002063 399 GKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALG 478 (973)
Q Consensus 399 ~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 478 (973)
+..+..|. .+++|++|++++|++++..|..+..+++|++|++++|+++...+..+.
T Consensus 164 ~~~~~~~~------------------------~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~ 219 (353)
T 2z80_A 164 KIQRKDFA------------------------GLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVD 219 (353)
T ss_dssp EECTTTTT------------------------TCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHH
T ss_pred ccCHHHcc------------------------CCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhh
Confidence 44444444 444555555555555544455555555555555555555432222333
Q ss_pred ccccCCEEEccCcccccCCCcccc---Cccccchhhcccccccc----CCCccccccCCCCeeecCCCccCCCCCch-hh
Q 002063 479 ALRQLSSLHLEENALTGSIPNEMG---DCARIVDLNLARNSLSG----NIPRSLSLLSSLNALNLSGNKLTGSIPDN-LM 550 (973)
Q Consensus 479 ~l~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-~~ 550 (973)
.+++|+.|+|++|++++..+..+. ....++.++|++|.+++ .+|..+..+++|+.|+|++|+++ .+|.. +.
T Consensus 220 ~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~~ 298 (353)
T 2z80_A 220 VTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK-SVPDGIFD 298 (353)
T ss_dssp HTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC-CCCTTTTT
T ss_pred hcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC-ccCHHHHh
Confidence 455555555555555544333322 23344455555555543 47788899999999999999999 56665 46
Q ss_pred ccc-CceEEccCCccccccCc
Q 002063 551 KLK-LSSIDLSENQLSGSVPL 570 (973)
Q Consensus 551 ~l~-L~~l~ls~N~l~~~~p~ 570 (973)
.++ |+.|+|++|++.|.+|.
T Consensus 299 ~l~~L~~L~L~~N~~~~~~~~ 319 (353)
T 2z80_A 299 RLTSLQKIWLHTNPWDCSCPR 319 (353)
T ss_dssp TCTTCCEEECCSSCBCCCHHH
T ss_pred cCCCCCEEEeeCCCccCcCCC
Confidence 775 99999999999999983
No 307
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=1.1e-28 Score=292.49 Aligned_cols=292 Identities=22% Similarity=0.305 Sum_probs=163.8
Q ss_pred CCcccccCCCCCCCCCCCcceeeeC------CCCCceEEEeecCCCCCccccccccCCCCCcEEeCCCCcccCccCcccc
Q 002063 45 DPHGVLDSWKESADSPCGFSGITCD------SVTGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELS 118 (973)
Q Consensus 45 d~~~~l~~W~~~~~~~c~w~gv~C~------~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~ 118 (973)
|...++++|.... +||.|+|..|. -....++.|++++++++ .+|..+. ++|++|+|++|+|+ .+|.
T Consensus 7 ~~~~~w~~W~~~~-~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~--- 78 (622)
T 3g06_A 7 EYDAVWSAWRRAA-PAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA--- 78 (622)
T ss_dssp ---CHHHHHHHTC-CGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---
T ss_pred HHHHHHHHHHhcC-CcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---
Confidence 4456778897654 47999775431 11234777888888777 6666665 67777777777776 4554
Q ss_pred CCCCCcEEEecCCcccCCCCCcCCCCCCCEEeccCcccCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEE
Q 002063 119 NCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYL 198 (973)
Q Consensus 119 ~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L 198 (973)
.+++|++|+|++|++++.+. .+++|++|+|++|.+++ +|. .+++|+.|++++|.++. +|.. +++|++|
T Consensus 79 ~l~~L~~L~Ls~N~l~~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~--lp~~---l~~L~~L 146 (622)
T 3g06_A 79 LPPELRTLEVSGNQLTSLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS--LPVL---PPGLQEL 146 (622)
T ss_dssp CCTTCCEEEECSCCCSCCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC--CCCC---CTTCCEE
T ss_pred cCCCCCEEEcCCCcCCcCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc--CCCC---CCCCCEE
Confidence 46777777777777766554 56677777777777664 222 34555555555555542 3332 2455555
Q ss_pred EcccccCCCCCChhhhccCCCCeeeccccccccccchhhhccccccEEEeecccCCCCCCccccccccccEEEeeccccc
Q 002063 199 FLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMY 278 (973)
Q Consensus 199 ~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~ 278 (973)
+|++|++++ +|. .+++|+.|++++|+|++ +| ..+++|+.|++++|+++
T Consensus 147 ~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~-l~---------------------------~~~~~L~~L~Ls~N~l~ 194 (622)
T 3g06_A 147 SVSDNQLAS-LPA---LPSELCKLWAYNNQLTS-LP---------------------------MLPSGLQELSVSDNQLA 194 (622)
T ss_dssp ECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CC---------------------------CCCTTCCEEECCSSCCS
T ss_pred ECcCCcCCC-cCC---ccCCCCEEECCCCCCCC-Cc---------------------------ccCCCCcEEECCCCCCC
Confidence 555555553 222 22344555555555542 33 22344555555555544
Q ss_pred cccCCccCCCCCccEEEcccCCCCCCCCCCcCCccccceeeccccccCCCCCccccccccccccccccccccccCChhhh
Q 002063 279 GKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLC 358 (973)
Q Consensus 279 ~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~ 358 (973)
+ +|.. +++|+.|++++|.++. +|.. +++|+.|++++|.+++ +| ..+++|+.|+|++|+|+ .+
T Consensus 195 ~-l~~~---~~~L~~L~L~~N~l~~-l~~~---~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~l----- 256 (622)
T 3g06_A 195 S-LPTL---PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SL----- 256 (622)
T ss_dssp C-CCCC---CTTCCEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CC-----
T ss_pred C-CCCc---cchhhEEECcCCcccc-cCCC---CCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cC-----
Confidence 2 3322 2345555555555542 2221 2455555555555553 33 33455666666666665 22
Q ss_pred hhhhHHHHHhhhccCCCCCCCcccCccccceEecccccccccCCccccCCCCcceEeccCCcCCCCCCCcc
Q 002063 359 EKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLI 429 (973)
Q Consensus 359 ~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~ 429 (973)
|. .+++|++|+|++|+|+ .+|..|..+++|+.|+|++|.+++..+..+
T Consensus 257 -------------------p~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l 304 (622)
T 3g06_A 257 -------------------PM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQAL 304 (622)
T ss_dssp -------------------CC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHH
T ss_pred -------------------Cc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHH
Confidence 22 2356667777777776 556666677777777777777666554433
No 308
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=3.7e-28 Score=280.15 Aligned_cols=233 Identities=21% Similarity=0.200 Sum_probs=166.1
Q ss_pred ccceeeccccccCCCCCccccccccccccccccccccccCChhhhhhhhHHHHHhhhccCCCCCCCcccCccccceEecc
Q 002063 314 KLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRIS 393 (973)
Q Consensus 314 ~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~Ls 393 (973)
+++.|+|++|++++..+..|..+++|++|+|++|.+++. .+..|.++++|++|+|+
T Consensus 65 ~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i------------------------~~~~~~~l~~L~~L~L~ 120 (440)
T 3zyj_A 65 NTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTI------------------------EIGAFNGLANLNTLELF 120 (440)
T ss_dssp TCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEE------------------------CGGGGTTCSSCCEEECC
T ss_pred CCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCcc------------------------ChhhccCCccCCEEECC
Confidence 344444444444444444455555555555555555421 12234455666666666
Q ss_pred cccccccCCccccCCCCcceEeccCCcCCCCCCCccCCCCCCCEEEccc-CCCCCCCChhhhcCCCCCEEecCCCcCCCC
Q 002063 394 DNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQN-NRFSGELPSELGRLTNLERLILTNNNFSGK 472 (973)
Q Consensus 394 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 472 (973)
+|+|++..+..|..+++|+.|+|++|+++...+..|..+++|++|+|++ |.+....+..|.++++|++|+|++|+++ .
T Consensus 121 ~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~ 199 (440)
T 3zyj_A 121 DNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-E 199 (440)
T ss_dssp SSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-S
T ss_pred CCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-c
Confidence 6666655555666666666666666666666666667777777777777 4444444456778888888888888887 4
Q ss_pred ccccccccccCCEEEccCcccccCCCccccCccccchhhccccccccCCCccccccCCCCeeecCCCccCCCCCchhhcc
Q 002063 473 IPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKL 552 (973)
Q Consensus 473 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 552 (973)
+| .+..+++|++|+|++|++++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..+..+..+
T Consensus 200 ~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 278 (440)
T 3zyj_A 200 IP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPL 278 (440)
T ss_dssp CC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSC
T ss_pred cc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccc
Confidence 45 47788889999999998888888888899999999999999988888889999999999999999997777777777
Q ss_pred c-CceEEccCCccccccCccc
Q 002063 553 K-LSSIDLSENQLSGSVPLDF 572 (973)
Q Consensus 553 ~-L~~l~ls~N~l~~~~p~~~ 572 (973)
+ |+.|+|++|+|.|+|...|
T Consensus 279 ~~L~~L~L~~Np~~CdC~l~~ 299 (440)
T 3zyj_A 279 HHLERIHLHHNPWNCNCDILW 299 (440)
T ss_dssp TTCCEEECCSSCEECSSTTHH
T ss_pred cCCCEEEcCCCCccCCCCchH
Confidence 5 9999999999999988653
No 309
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=4.4e-28 Score=280.55 Aligned_cols=252 Identities=19% Similarity=0.182 Sum_probs=163.8
Q ss_pred ccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCccccceeeccccccCCCCCcccccccccccccccc
Q 002063 267 LQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISE 346 (973)
Q Consensus 267 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~ 346 (973)
...++.+++.++ .+|..+. ++++.|++++|+|++..+..|.++++|+.|+|++|.+++..+..
T Consensus 56 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~-------------- 118 (452)
T 3zyi_A 56 FSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGA-------------- 118 (452)
T ss_dssp SCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTT--------------
T ss_pred CcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhh--------------
Confidence 345555555555 4454433 35555555555555544445555555555555444444433344
Q ss_pred ccccccCChhhhhhhhHHHHHhhhccCCCCCCCcccCccccceEecccccccccCCccccCCCCcceEeccCCcCCCCCC
Q 002063 347 NQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGIS 426 (973)
Q Consensus 347 N~l~~~~p~~~~~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 426 (973)
|.++++|++|+|++|+|++..+..|..+++|++|+|++|++++.++
T Consensus 119 ----------------------------------~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 164 (452)
T 3zyi_A 119 ----------------------------------FNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPS 164 (452)
T ss_dssp ----------------------------------TTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECT
T ss_pred ----------------------------------ccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCH
Confidence 4445555555555555554445555556666666666666665555
Q ss_pred CccCCCCCCCEEEccc-CCCCCCCChhhhcCCCCCEEecCCCcCCCCccccccccccCCEEEccCcccccCCCccccCcc
Q 002063 427 PLIGLSTSLSQLVLQN-NRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCA 505 (973)
Q Consensus 427 ~~~~~~~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 505 (973)
..|..+++|++|+|++ |.+....+..|.++++|+.|+|++|++++ +| .+..+++|++|+|++|++++..|..|.+++
T Consensus 165 ~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 242 (452)
T 3zyi_A 165 YAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLS 242 (452)
T ss_dssp TTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CC-CCTTCTTCCEEECTTSCCSEECGGGGTTCT
T ss_pred hHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-cc-cccccccccEEECcCCcCcccCcccccCcc
Confidence 5566666666666666 34443344457777777777777777774 33 467777788888888888777777788888
Q ss_pred ccchhhccccccccCCCccccccCCCCeeecCCCccCCCCCchhhccc-CceEEccCCccccccCcc
Q 002063 506 RIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLK-LSSIDLSENQLSGSVPLD 571 (973)
Q Consensus 506 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-L~~l~ls~N~l~~~~p~~ 571 (973)
+|+.|+|++|++++..|..|..+++|+.|+|++|+|++..+..+..++ |+.|+|++|+|.|+|...
T Consensus 243 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~~~ 309 (452)
T 3zyi_A 243 SLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDIL 309 (452)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTTTH
T ss_pred CCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCCCch
Confidence 888888888888877777888888888888888888866666666665 888888888888888765
No 310
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=1.3e-27 Score=258.59 Aligned_cols=254 Identities=19% Similarity=0.207 Sum_probs=151.0
Q ss_pred EEEeecccCCCCCCccccccccccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCccccceeeccccc
Q 002063 245 KIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNR 324 (973)
Q Consensus 245 ~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 324 (973)
.++.+++.++ .+|..+ .++|++|++++|.+++..+..+.++++|++|++++|.+++..|..|..+++|++|++++|.
T Consensus 15 ~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 91 (285)
T 1ozn_A 15 TTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNA 91 (285)
T ss_dssp EEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCT
T ss_pred EEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCC
Confidence 3444444444 333322 2455555555555554444455555555555555555555545555555555555555554
Q ss_pred -cCCCCCccccccccccccccccccccccCChhhhhhhhHHHHHhhhccCCCCCCCcccCccccceEecccccccccCCc
Q 002063 325 -FSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPD 403 (973)
Q Consensus 325 -l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 403 (973)
++...|..+..+++|++|++++|++++. .|..+..+++|++|+|++|++++..+.
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~------------------------~~~~~~~l~~L~~L~l~~n~l~~~~~~ 147 (285)
T 1ozn_A 92 QLRSVDPATFHGLGRLHTLHLDRCGLQEL------------------------GPGLFRGLAALQYLYLQDNALQALPDD 147 (285)
T ss_dssp TCCCCCTTTTTTCTTCCEEECTTSCCCCC------------------------CTTTTTTCTTCCEEECCSSCCCCCCTT
T ss_pred CccccCHHHhcCCcCCCEEECCCCcCCEE------------------------CHhHhhCCcCCCEEECCCCcccccCHh
Confidence 4444455555556666666666655521 223445556666666666666655555
Q ss_pred cccCCCCcceEeccCCcCCCCCCCccCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEecCCCcCCCCccccccccccC
Q 002063 404 GLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQL 483 (973)
Q Consensus 404 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 483 (973)
.|..+++|+.|++++|++++.++..+..+++|++|+|++|++++..|..+..+++|+.|+|++|++++..+..+..+++|
T Consensus 148 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 227 (285)
T 1ozn_A 148 TFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRAL 227 (285)
T ss_dssp TTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTC
T ss_pred HhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCccc
Confidence 56666666666666666666666666677777777777777777677777777777777777777776666667777777
Q ss_pred CEEEccCcccccCCCccccCccccchhhccccccccCCCcccc
Q 002063 484 SSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLS 526 (973)
Q Consensus 484 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 526 (973)
+.|+|++|.+....+. ..-...++.+..+.|.+....|..+.
T Consensus 228 ~~L~l~~N~~~c~~~~-~~~~~~l~~~~~~~~~~~c~~p~~l~ 269 (285)
T 1ozn_A 228 QYLRLNDNPWVCDCRA-RPLWAWLQKFRGSSSEVPCSLPQRLA 269 (285)
T ss_dssp CEEECCSSCEECSGGG-HHHHHHHHHCCSEECCCBEEESGGGT
T ss_pred CEEeccCCCccCCCCc-HHHHHHHHhcccccCccccCCchHhC
Confidence 7777777777642221 11123455555666666666665543
No 311
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=5.6e-29 Score=272.95 Aligned_cols=204 Identities=15% Similarity=0.135 Sum_probs=133.3
Q ss_pred CCCCCCEEeccCcccCCccccccccccccceEEccCCcCCCCCCccccc-------CCCCCCEEEcccccCCCCCChhh-
Q 002063 142 ALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIG-------NLKNLTYLFLAHCNLRGRIPESI- 213 (973)
Q Consensus 142 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~-------~l~~L~~L~L~~n~l~~~~p~~l- 213 (973)
..++|+.|++++|.+ .+|..+... |+.|++++|.+....+|..+. ++++|++|+|++|++++.+|..+
T Consensus 41 ~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 116 (312)
T 1wwl_A 41 GGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLL 116 (312)
T ss_dssp EEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSS
T ss_pred cCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHH
Confidence 344555666666666 445544443 666667666665556666665 78888888888888888888776
Q ss_pred -hccCCCCeeeccccccccccchhhhcc-----ccccEEEeecccCCCCCCccccccccccEEEeeccccccc--cCCcc
Q 002063 214 -SELRELGTLDICRNKISGEFPRSIRKL-----QKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGK--LPEEI 285 (973)
Q Consensus 214 -~~l~~L~~L~L~~n~l~~~~p~~l~~l-----~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~--~p~~~ 285 (973)
..+++|++|+|++|++++. |..++.+ ++|++|+|++|++++..|..|+.+++|++|+|++|++.+. .|..+
T Consensus 117 ~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 195 (312)
T 1wwl_A 117 EATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISAL 195 (312)
T ss_dssp SCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHS
T ss_pred HhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHH
Confidence 8888888888888888866 7777777 7888888888888877778888888888888888887654 23333
Q ss_pred --CCCCCccEEEcccCCCCCC--CC-CCcCCccccceeeccccccCCCCC-cccccccccccccccccccc
Q 002063 286 --GNLKNLTVFQCFKNNFSGE--FP-SGFGDMRKLFAFSIYGNRFSGPFP-ENLGRYTALTDVDISENQFS 350 (973)
Q Consensus 286 --~~l~~L~~L~l~~N~l~~~--~p-~~~~~l~~L~~L~l~~N~l~~~~~-~~l~~l~~L~~L~Ls~N~l~ 350 (973)
.++++|++|++++|++++. ++ ..+..+++|+.|++++|++++..| ..+..+++|++|+|++|+|+
T Consensus 196 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~ 266 (312)
T 1wwl_A 196 CPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK 266 (312)
T ss_dssp CTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS
T ss_pred HhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC
Confidence 6677777777777777621 11 122344455555555555444332 22333344444444444443
No 312
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=9.6e-29 Score=271.06 Aligned_cols=265 Identities=18% Similarity=0.237 Sum_probs=136.7
Q ss_pred ccCCCCCCCCCCCcceeeeCCCCCceEEEeecCCCCCccccccccCCCCCcEEeCCCCcc-cCccCcccc-------CCC
Q 002063 50 LDSWKESADSPCGFSGITCDSVTGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVL-SGKLPLELS-------NCS 121 (973)
Q Consensus 50 l~~W~~~~~~~c~w~gv~C~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l-~~~~p~~l~-------~l~ 121 (973)
..+|.... .|+.+..+.......+++.++++++.+ .+|..+... |++|+|++|.+ .+.+|..+. +++
T Consensus 21 ~~~~~~~~-~c~~~~~~~~~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~ 95 (312)
T 1wwl_A 21 KPDWSSAF-NCLGAADVELYGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGIS 95 (312)
T ss_dssp SCCGGGGG-GSSSCSEEEEEEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTS
T ss_pred ccchHHHh-hhhccccEEEEccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcC
Confidence 34554332 234454443222223566666666666 566655544 66777777766 345555554 566
Q ss_pred CCcEEEecCCcccCCCC-Cc--CCCCCCCEEeccCcccCCccccccccc-----cccceEEccCCcCCCCCCcccccCCC
Q 002063 122 NLKVLNVTGNAMVGSVP-DL--SALKNLEIFDLSINYFTGRFPRWVVNL-----TQLVSLSIGDNVYDEAEIPESIGNLK 193 (973)
Q Consensus 122 ~L~~L~L~~n~l~~~~~-~l--~~l~~L~~L~Ls~n~l~~~~~~~~~~l-----~~L~~L~l~~n~l~~~~ip~~~~~l~ 193 (973)
+|++|+|++|++++..| .+ +.+++|++|+|++|.+++. |..+..+ ++|++|++++|.+
T Consensus 96 ~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l------------- 161 (312)
T 1wwl_A 96 GLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHS------------- 161 (312)
T ss_dssp CCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSC-------------
T ss_pred CccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCC-------------
Confidence 77777777777665443 23 6666666666666666654 5555554 4555555555544
Q ss_pred CCCEEEcccccCCCCCChhhhccCCCCeeeccccccccc--cchhh--hccccccEEEeecccCCCC--CC-cccccccc
Q 002063 194 NLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGE--FPRSI--RKLQKLWKIELYANNLTGE--LP-AELGNLTL 266 (973)
Q Consensus 194 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~--~p~~l--~~l~~L~~L~L~~n~l~~~--~~-~~l~~l~~ 266 (973)
++..|..++.+++|++|+|++|++.+. .|..+ ..+++|++|+|++|++++. ++ ..+.++++
T Consensus 162 ------------~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~ 229 (312)
T 1wwl_A 162 ------------LNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQ 229 (312)
T ss_dssp ------------CCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCC
T ss_pred ------------ccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCC
Confidence 444444444444444444444444332 12222 4444455555555544421 11 12234445
Q ss_pred ccEEEeeccccccccC-CccCCCCCccEEEcccCCCCCCCCCCcCCccccceeeccccccCCCCCccccccccccccccc
Q 002063 267 LQEFDISSNQMYGKLP-EEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDIS 345 (973)
Q Consensus 267 L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls 345 (973)
|++|+|++|++++..| ..+..+++|++|++++|+|+ .+|..+. ++|+.|++++|++++. |. +..+++|++|+|+
T Consensus 230 L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~ 304 (312)
T 1wwl_A 230 LQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLK 304 (312)
T ss_dssp CSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECT
T ss_pred CCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEecc
Confidence 5555555555554443 23334455555555555555 4444443 5555555555555543 33 5555566666666
Q ss_pred ccccc
Q 002063 346 ENQFS 350 (973)
Q Consensus 346 ~N~l~ 350 (973)
+|+++
T Consensus 305 ~N~l~ 309 (312)
T 1wwl_A 305 GNPFL 309 (312)
T ss_dssp TCTTT
T ss_pred CCCCC
Confidence 66555
No 313
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=1.2e-27 Score=258.84 Aligned_cols=253 Identities=21% Similarity=0.233 Sum_probs=172.8
Q ss_pred EEEeecCCCCCccccccccCCCCCcEEeCCCCcccCccCccccCCCCCcEEEecCCcccCCCC-CcCCCCCCCEEeccCc
Q 002063 76 TEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVP-DLSALKNLEIFDLSIN 154 (973)
Q Consensus 76 ~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~-~l~~l~~L~~L~Ls~n 154 (973)
+.++.++++++ .+|..+ .++|++|+|++|.+++..+..|+.+++|++|+|++|.+.+..+ .+.++++|++|+|++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 55667777776 445443 4688999999999987777788888899999999888887754 5888888888888888
Q ss_pred c-cCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccccCCCCCChhhhccCCCCeeecccccccccc
Q 002063 155 Y-FTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEF 233 (973)
Q Consensus 155 ~-l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~ 233 (973)
. +++..|..|..+++|++|++++|.++.. .|..+.++++|++|++++|++++..+..++.+++|++|+|++|++++..
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 169 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQEL-GPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVP 169 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCC-CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEEC
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEE-CHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccC
Confidence 6 7766677777777777777777777532 2455677777777777777777666666777777777777777777555
Q ss_pred chhhhccccccEEEeecccCCCCCCccccccccccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCcc
Q 002063 234 PRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMR 313 (973)
Q Consensus 234 p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~ 313 (973)
+..+..+++|++|+|++|.+++..|..+..+++|++|++++|++++..+..+..+++|+.|++++|.+....+.. .-+.
T Consensus 170 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~-~~~~ 248 (285)
T 1ozn_A 170 ERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR-PLWA 248 (285)
T ss_dssp TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH-HHHH
T ss_pred HHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcH-HHHH
Confidence 555666777777777777776666666666777777777777766544455666666666666666665432211 1123
Q ss_pred ccceeeccccccCCCCCccc
Q 002063 314 KLFAFSIYGNRFSGPFPENL 333 (973)
Q Consensus 314 ~L~~L~l~~N~l~~~~~~~l 333 (973)
.++.+....+.+....|..+
T Consensus 249 ~l~~~~~~~~~~~c~~p~~l 268 (285)
T 1ozn_A 249 WLQKFRGSSSEVPCSLPQRL 268 (285)
T ss_dssp HHHHCCSEECCCBEEESGGG
T ss_pred HHHhcccccCccccCCchHh
Confidence 34444455555555555444
No 314
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=5.7e-27 Score=270.18 Aligned_cols=246 Identities=18% Similarity=0.191 Sum_probs=128.4
Q ss_pred CEEEcccccCCCCCChhhhccCCCCeeeccccccccccchhhhccccccEEEeecccCCCCCCccccccccccEEEeecc
Q 002063 196 TYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSN 275 (973)
Q Consensus 196 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N 275 (973)
+.++.+++.++ .+|..+. ++++.|+|++|+|++..+..|.++++|++|+|++|.|++..+..|.++++|++|+|++|
T Consensus 46 ~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n 122 (440)
T 3zyj_A 46 SKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDN 122 (440)
T ss_dssp CEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSS
T ss_pred CEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCC
Confidence 34444444444 3333332 34444555555444444444444444444444444444333344444444444444444
Q ss_pred ccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCccccceeecccc-ccCCCCCccccccccccccccccccccccCC
Q 002063 276 QMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGN-RFSGPFPENLGRYTALTDVDISENQFSGSFP 354 (973)
Q Consensus 276 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N-~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p 354 (973)
++++..+..+..+++|+.|++++|.+....+..|..+++|+.|++++| .+....+..|.
T Consensus 123 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~-------------------- 182 (440)
T 3zyj_A 123 RLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFE-------------------- 182 (440)
T ss_dssp CCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTT--------------------
T ss_pred cCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhh--------------------
Confidence 444333334444444444444444444333334444444444444432 12211122233
Q ss_pred hhhhhhhhHHHHHhhhccCCCCCCCcccCccccceEecccccccccCCccccCCCCcceEeccCCcCCCCCCCccCCCCC
Q 002063 355 KYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTS 434 (973)
Q Consensus 355 ~~~~~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~ 434 (973)
++++|++|+|++|.++ .+| .+..+++|+.|+|++|++++..+..|..+++
T Consensus 183 ----------------------------~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 232 (440)
T 3zyj_A 183 ----------------------------GLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMH 232 (440)
T ss_dssp ----------------------------TCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTT
T ss_pred ----------------------------cccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCcc
Confidence 3344444444444444 222 2444455555555555555555555566666
Q ss_pred CCEEEcccCCCCCCCChhhhcCCCCCEEecCCCcCCCCccccccccccCCEEEccCcccc
Q 002063 435 LSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALT 494 (973)
Q Consensus 435 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 494 (973)
|+.|+|++|++++..+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|.+.
T Consensus 233 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 233 LQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp CCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred CCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 777777777777666777777777778888888777766777777888888888888775
No 315
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=1.3e-26 Score=274.73 Aligned_cols=263 Identities=26% Similarity=0.395 Sum_probs=137.7
Q ss_pred CCCeeeccccccccccchhhhccccccEEEeecccCCCCCCccccccccccEEEeeccccccccCCccCCCCCccEEEcc
Q 002063 218 ELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCF 297 (973)
Q Consensus 218 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 297 (973)
++++|++++|.++ .+|..+. ++|++|+|++|.|+ .+|. .+++|++|+|++|+++ .+|. .+++|++|+++
T Consensus 41 ~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls 109 (622)
T 3g06_A 41 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIF 109 (622)
T ss_dssp CCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEEC
T ss_pred CCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECc
Confidence 4666666666666 5555444 56666666666666 3443 3456666666666655 3443 44556666666
Q ss_pred cCCCCCCCCCCcCCccccceeeccccccCCCCCccccccccccccccccccccccCChhhhhhhhHHHHHhhhccCCCCC
Q 002063 298 KNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEV 377 (973)
Q Consensus 298 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~nn~~~~~ 377 (973)
+|++++ +|. .+++|+.|++++|++++ +|.. +++
T Consensus 110 ~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~--------------------------------------- 142 (622)
T 3g06_A 110 SNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPG--------------------------------------- 142 (622)
T ss_dssp SCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTT---------------------------------------
T ss_pred CCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCC---------------------------------------
Confidence 665553 222 33445555555555542 2222 244
Q ss_pred CCcccCccccceEecccccccccCCccccCCCCcceEeccCCcCCCCCCCccCCCCCCCEEEcccCCCCCCCChhhhcCC
Q 002063 378 PNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLT 457 (973)
Q Consensus 378 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~ 457 (973)
|++|+|++|++++ +|. .+++|+.|++++|++++++ ..+++|+.|+|++|+|++ +|.. ++
T Consensus 143 ---------L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~l~----~~~~~L~~L~Ls~N~l~~-l~~~---~~ 201 (622)
T 3g06_A 143 ---------LQELSVSDNQLAS-LPA---LPSELCKLWAYNNQLTSLP----MLPSGLQELSVSDNQLAS-LPTL---PS 201 (622)
T ss_dssp ---------CCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSCCC----CCCTTCCEEECCSSCCSC-CCCC---CT
T ss_pred ---------CCEEECcCCcCCC-cCC---ccCCCCEEECCCCCCCCCc----ccCCCCcEEECCCCCCCC-CCCc---cc
Confidence 4455555554442 222 1234455555555554433 234555555555555553 3321 34
Q ss_pred CCCEEecCCCcCCCCccccccccccCCEEEccCcccccCCCccccCccccchhhccccccccCCCccccccCCCCeeecC
Q 002063 458 NLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLS 537 (973)
Q Consensus 458 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 537 (973)
+|+.|++++|.++ .+|.. +++|+.|+|++|+|++ +| ..+++|+.|+|++|+|+ .+|. .+++|+.|+|+
T Consensus 202 ~L~~L~L~~N~l~-~l~~~---~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls 269 (622)
T 3g06_A 202 ELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVY 269 (622)
T ss_dssp TCCEEECCSSCCS-SCCCC---CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECC
T ss_pred hhhEEECcCCccc-ccCCC---CCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCC
Confidence 5555666666555 23322 2456666666666654 33 33455666666666665 3443 44566666666
Q ss_pred CCccCCCCCchhhccc-CceEEccCCccccccCccc
Q 002063 538 GNKLTGSIPDNLMKLK-LSSIDLSENQLSGSVPLDF 572 (973)
Q Consensus 538 ~N~l~~~~p~~~~~l~-L~~l~ls~N~l~~~~p~~~ 572 (973)
+|+|+ .+|..+..++ |+.|+|++|++++.+|..+
T Consensus 270 ~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l 304 (622)
T 3g06_A 270 RNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQAL 304 (622)
T ss_dssp SSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHH
T ss_pred CCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHH
Confidence 66666 5565565554 6666666666666665543
No 316
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=6.4e-27 Score=270.77 Aligned_cols=110 Identities=24% Similarity=0.251 Sum_probs=69.9
Q ss_pred CccccceEecccccccccCCccccCCCCcceEeccCCcCCCCCCCccCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEE
Q 002063 383 DCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERL 462 (973)
Q Consensus 383 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 462 (973)
.+++|++|+|++|.+++ +| .+..+++|+.|+|++|++++..+..|..+++|+.|+|++|++++..|..|..+++|+.|
T Consensus 194 ~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 271 (452)
T 3zyi_A 194 GLFNLKYLNLGMCNIKD-MP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVEL 271 (452)
T ss_dssp TCTTCCEEECTTSCCSS-CC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCCEEECCCCcccc-cc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEE
Confidence 33444444444444442 12 23444455555555555555555555666667777777777776677777777788888
Q ss_pred ecCCCcCCCCccccccccccCCEEEccCcccc
Q 002063 463 ILTNNNFSGKIPSALGALRQLSSLHLEENALT 494 (973)
Q Consensus 463 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 494 (973)
+|++|++++..+..|..+++|+.|+|++|.+.
T Consensus 272 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 272 NLAHNNLSSLPHDLFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp ECCSSCCSCCCTTSSTTCTTCCEEECCSSCEE
T ss_pred ECCCCcCCccChHHhccccCCCEEEccCCCcC
Confidence 88888887766777777888888888888776
No 317
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.94 E-value=1.9e-28 Score=269.37 Aligned_cols=266 Identities=17% Similarity=0.147 Sum_probs=151.0
Q ss_pred CCEEEcccccCCCCCChhhhccCCCCeeeccccccccccchhhhccccccEEEeecccCCCCCCccccccccccEEEeec
Q 002063 195 LTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISS 274 (973)
Q Consensus 195 L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~ 274 (973)
++.++++.+.+...+...+..+++|++|+|++|++++..|..|..+++|++|+|++|.+++..+ +..+++|++|++++
T Consensus 12 l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~ 89 (317)
T 3o53_A 12 YKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNN 89 (317)
T ss_dssp EEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCS
T ss_pred eeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcC
Confidence 3445555555554444444555566666666666665555666666666666666666664332 56666666666666
Q ss_pred cccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCccccceeeccccccCCCCCccccccccccccccccccccccCC
Q 002063 275 NQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFP 354 (973)
Q Consensus 275 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p 354 (973)
|++++.. ..++|+.|++++|++++..+.. +++|+.|++++|++++..+..
T Consensus 90 n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~---------------------- 139 (317)
T 3o53_A 90 NYVQELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLD---------------------- 139 (317)
T ss_dssp SEEEEEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBC----------------------
T ss_pred Ccccccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchh----------------------
Confidence 6665322 2245555555555555433221 233344444444443333333
Q ss_pred hhhhhhhhHHHHHhhhccCCCCCCCcccCccccceEecccccccccCCcccc-CCCCcceEeccCCcCCCCCCCccCCCC
Q 002063 355 KYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLW-ALPNVGMLDFGDNDFTGGISPLIGLST 433 (973)
Q Consensus 355 ~~~~~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~~~ 433 (973)
+..+++|++|+|++|.+++..+..+. .+++|+.|+|++|++++.... ..++
T Consensus 140 --------------------------~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~--~~l~ 191 (317)
T 3o53_A 140 --------------------------EGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQ--VVFA 191 (317)
T ss_dssp --------------------------TGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECC--CCCT
T ss_pred --------------------------hhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcccccc--cccc
Confidence 33444555555555555544444432 345555555555555444221 2356
Q ss_pred CCCEEEcccCCCCCCCChhhhcCCCCCEEecCCCcCCCCccccccccccCCEEEccCcccc-cCCCccccCccccchhhc
Q 002063 434 SLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALT-GSIPNEMGDCARIVDLNL 512 (973)
Q Consensus 434 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L 512 (973)
+|++|+|++|++++ +|..+..+++|+.|+|++|+++ .+|..+..+++|+.|+|++|+++ +.+|.++..+++|+.|++
T Consensus 192 ~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l 269 (317)
T 3o53_A 192 KLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAK 269 (317)
T ss_dssp TCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHH
T ss_pred cCCEEECCCCcCCc-chhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEEC
Confidence 67777777777774 4445777777777777777777 45666777777777777777776 566666777777777777
Q ss_pred ccc-ccccCCC
Q 002063 513 ARN-SLSGNIP 522 (973)
Q Consensus 513 s~N-~l~~~~p 522 (973)
++| .++|..|
T Consensus 270 ~~~~~l~~~~~ 280 (317)
T 3o53_A 270 QTVKKLTGQNE 280 (317)
T ss_dssp HHHHHHHSSSS
T ss_pred CCchhccCCch
Confidence 733 4554443
No 318
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.94 E-value=3e-28 Score=267.74 Aligned_cols=259 Identities=18% Similarity=0.181 Sum_probs=191.3
Q ss_pred ceEEEeecCCCCCccccccccCCCCCcEEeCCCCcccCccCccccCCCCCcEEEecCCcccCCCCCcCCCCCCCEEeccC
Q 002063 74 RVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSI 153 (973)
Q Consensus 74 ~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~ 153 (973)
+....+++++++...+...+..+++|++|+|++|.+++..|..|+.+++|++|+|++|.+.+.++ +..+++|++|+|++
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~-~~~l~~L~~L~Ls~ 89 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD-LESLSTLRTLDLNN 89 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE-ETTCTTCCEEECCS
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh-hhhcCCCCEEECcC
Confidence 34555666777765555566677889999999999987777888899999999999998877665 88888899999998
Q ss_pred cccCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccccCCCCCChhhhccCCCCeeecccccccccc
Q 002063 154 NYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEF 233 (973)
Q Consensus 154 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~ 233 (973)
|.+++.. ..++|++|++++|.++.. + ...+++|++|++++|++++..+..++.+++|++|+|++|++++..
T Consensus 90 n~l~~l~-----~~~~L~~L~l~~n~l~~~--~--~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 160 (317)
T 3o53_A 90 NYVQELL-----VGPSIETLHAANNNISRV--S--CSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVN 160 (317)
T ss_dssp SEEEEEE-----ECTTCCEEECCSSCCSEE--E--ECCCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEE
T ss_pred Ccccccc-----CCCCcCEEECCCCccCCc--C--ccccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCccc
Confidence 8887432 347888888888887632 2 233677888888888888766777788888888888888887766
Q ss_pred chhhh-ccccccEEEeecccCCCCCCccccccccccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCc
Q 002063 234 PRSIR-KLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDM 312 (973)
Q Consensus 234 p~~l~-~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l 312 (973)
+..+. .+++|++|+|++|.+++. + ....+++|++|+|++|++++ +|..+..+++|+.|++++|+++ .+|..+..+
T Consensus 161 ~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l 236 (317)
T 3o53_A 161 FAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFS 236 (317)
T ss_dssp GGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCCC
T ss_pred HHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCccc-chhhHhhcC
Confidence 66663 677888888888888744 2 23347778888888888773 4555777777888888887777 456667777
Q ss_pred cccceeeccccccC-CCCCcccccccccccccccc
Q 002063 313 RKLFAFSIYGNRFS-GPFPENLGRYTALTDVDISE 346 (973)
Q Consensus 313 ~~L~~L~l~~N~l~-~~~~~~l~~l~~L~~L~Ls~ 346 (973)
++|+.|++++|++. +..|..+..+++|+.|++++
T Consensus 237 ~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~ 271 (317)
T 3o53_A 237 QNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQT 271 (317)
T ss_dssp TTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHH
T ss_pred CCCCEEEccCCCccCcCHHHHHhccccceEEECCC
Confidence 77777777777776 55666666677777777663
No 319
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.94 E-value=4.1e-30 Score=309.30 Aligned_cols=429 Identities=11% Similarity=0.094 Sum_probs=226.1
Q ss_pred CCCcceeeeCCCCCceEEEeecCCCCCcccc-ccccCCCCCcEEeCCCCcccC---ccCc------------cccCCCCC
Q 002063 60 PCGFSGITCDSVTGRVTEISFDNKSLSGEIS-SSISALQSLTVLSLPFNVLSG---KLPL------------ELSNCSNL 123 (973)
Q Consensus 60 ~c~w~gv~C~~~~~~v~~l~l~~~~l~~~~~-~~l~~l~~L~~L~Ls~n~l~~---~~p~------------~l~~l~~L 123 (973)
|++|.++.. .....+++.+.. +..+ ..+..+++|++|+|+++.... ..|. ....+++|
T Consensus 34 ck~W~~~~~----~~~~~l~~~~~~--~~~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L 107 (594)
T 2p1m_B 34 CKSWYEIER----WCRRKVFIGNCY--AVSPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWL 107 (594)
T ss_dssp CHHHHHHHH----HHCCEEEESSTT--SSCHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTC
T ss_pred HHHHHHhhh----hhceEEeecccc--ccCHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCC
Confidence 457888832 123455554432 2222 346678889999998875321 1121 13467788
Q ss_pred cEEEecCCcccCCCC-CcC-CCCCCCEEeccCc-ccCCc-cccccccccccceEEccCCcCCCCC---CcccccCCCCCC
Q 002063 124 KVLNVTGNAMVGSVP-DLS-ALKNLEIFDLSIN-YFTGR-FPRWVVNLTQLVSLSIGDNVYDEAE---IPESIGNLKNLT 196 (973)
Q Consensus 124 ~~L~L~~n~l~~~~~-~l~-~l~~L~~L~Ls~n-~l~~~-~~~~~~~l~~L~~L~l~~n~l~~~~---ip~~~~~l~~L~ 196 (973)
++|+|++|.+++... .+. .+++|++|+|++| .++.. ++..+.++++|++|++++|.++... ++.....+++|+
T Consensus 108 ~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~ 187 (594)
T 2p1m_B 108 EEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLV 187 (594)
T ss_dssp CEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCC
T ss_pred CeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCc
Confidence 888888887765433 343 5788888888888 45432 3444457888888888888765433 223334667888
Q ss_pred EEEcccccCCCCCChhh----hccCCCCeeecccc-ccccccchhhhccccccEEEeecc-------cCCCCCCcccccc
Q 002063 197 YLFLAHCNLRGRIPESI----SELRELGTLDICRN-KISGEFPRSIRKLQKLWKIELYAN-------NLTGELPAELGNL 264 (973)
Q Consensus 197 ~L~L~~n~l~~~~p~~l----~~l~~L~~L~L~~n-~l~~~~p~~l~~l~~L~~L~L~~n-------~l~~~~~~~l~~l 264 (973)
+|++++|. .......+ ..+++|++|+|++| .++ .++..+..+++|++|+++.+ .+.+ ++..+.++
T Consensus 188 ~L~l~~~~-~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~-~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~-l~~~l~~~ 264 (594)
T 2p1m_B 188 SLNISCLA-SEVSFSALERLVTRCPNLKSLKLNRAVPLE-KLATLLQRAPQLEELGTGGYTAEVRPDVYSG-LSVALSGC 264 (594)
T ss_dssp EEECTTCC-SCCCHHHHHHHHHHCTTCCEEECCTTSCHH-HHHHHHHHCTTCSEEECSBCCCCCCHHHHHH-HHHHHHTC
T ss_pred EEEecccC-CcCCHHHHHHHHHhCCCCcEEecCCCCcHH-HHHHHHhcCCcceEcccccccCccchhhHHH-HHHHHhcC
Confidence 88888876 21112222 44588888888887 444 37777778888888875443 3332 33356667
Q ss_pred ccccEE-EeeccccccccCCccCCCCCccEEEcccCCCCCCCCC-CcCCccccceeeccccccCCC-CCccccccccccc
Q 002063 265 TLLQEF-DISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPS-GFGDMRKLFAFSIYGNRFSGP-FPENLGRYTALTD 341 (973)
Q Consensus 265 ~~L~~L-~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~l~~L~~L~l~~N~l~~~-~~~~l~~l~~L~~ 341 (973)
++|+.| .+..... +.++..+..+++|+.|++++|.+++.... .+..+++|+.|++++| +.+. ++.....+++|++
T Consensus 265 ~~L~~Ls~~~~~~~-~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~ 342 (594)
T 2p1m_B 265 KELRCLSGFWDAVP-AYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRE 342 (594)
T ss_dssp TTCCEEECCBTCCG-GGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCE
T ss_pred CCcccccCCcccch-hhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCE
Confidence 777776 3333222 23444444566777777777765532221 2345566666666665 3211 1111223555666
Q ss_pred ccccc---------ccccccCChhhhhhhhHHHHHhhhccCCCCCCCcccCccccceEecccccccccCCcccc-CCCCc
Q 002063 342 VDISE---------NQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLW-ALPNV 411 (973)
Q Consensus 342 L~Ls~---------N~l~~~~p~~~~~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L 411 (973)
|+|++ +.+++.....+ ...+++|++|+++.|.+++..+..+. .+++|
T Consensus 343 L~L~~~~~~g~~~~~~l~~~~l~~l-----------------------~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L 399 (594)
T 2p1m_B 343 LRVFPSEPFVMEPNVALTEQGLVSV-----------------------SMGCPKLESVLYFCRQMTNAALITIARNRPNM 399 (594)
T ss_dssp EEEECSCTTCSSCSSCCCHHHHHHH-----------------------HHHCTTCCEEEEEESCCCHHHHHHHHHHCTTC
T ss_pred EEEecCcccccccCCCCCHHHHHHH-----------------------HHhchhHHHHHHhcCCcCHHHHHHHHhhCCCc
Confidence 65532 22221100000 01245566666666655544333333 24555
Q ss_pred ceEecc--C----CcCCCCCCCccCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEecCCCcCCCCccccccc-cccCC
Q 002063 412 GMLDFG--D----NDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGA-LRQLS 484 (973)
Q Consensus 412 ~~L~L~--~----N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-l~~L~ 484 (973)
+.|+++ + |.+++.+.. ..++..+..+++|+.|+|++ .+++..+..+.. +++|+
T Consensus 400 ~~L~L~~~~~~~~~~l~~~~~~-------------------~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~ 459 (594)
T 2p1m_B 400 TRFRLCIIEPKAPDYLTLEPLD-------------------IGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKME 459 (594)
T ss_dssp CEEEEEESSTTCCCTTTCCCTH-------------------HHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCC
T ss_pred ceeEeecccCCCcccccCCchh-------------------hHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhcc
Confidence 555555 2 222211110 00111234455555555544 444333333333 55555
Q ss_pred EEEccCcccccCCCccc-cCccccchhhccccccccCCCc-cccccCCCCeeecCCCccC
Q 002063 485 SLHLEENALTGSIPNEM-GDCARIVDLNLARNSLSGNIPR-SLSLLSSLNALNLSGNKLT 542 (973)
Q Consensus 485 ~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~ 542 (973)
.|+|++|.+++..+..+ .++++|+.|+|++|.+++.... .+..+++|+.|+|++|+++
T Consensus 460 ~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~ 519 (594)
T 2p1m_B 460 MLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVS 519 (594)
T ss_dssp EEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCB
T ss_pred EeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCC
Confidence 55555555543333333 3455556666666655433222 2234566666666666653
No 320
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94 E-value=7.6e-28 Score=283.61 Aligned_cols=185 Identities=17% Similarity=0.075 Sum_probs=132.2
Q ss_pred eecccCcEEEEEEEEcCCCceEEEEEeecc------------ccHHHHHHHHHHHHhc-CCCceeeEeEEEEeCCeeEEE
Q 002063 683 LIGSGGTGKVYRLDLKKNAGTVAVKQLWKG------------DGVKVFAAEMEILGKI-RHRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 683 ~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~------------~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv 749 (973)
..+.|++|.+.+++....|+.||||++.+. ...++|.+|+++|+++ .|+||+++++++++++..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 467888888888888777999999998652 2345689999999999 799999999999999999999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccc
Q 002063 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
|||++|++|.+++... ..++.. +|+.||+.||+|+| ++|||||||||+|||++.+|.+||+|||+|+..
T Consensus 321 MEyv~G~~L~d~i~~~-----~~l~~~---~I~~QIl~AL~ylH---~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~ 389 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAG-----EEIDRE---KILGSLLRSLAALE---KQGFWHDDVRPWNVMVDARQHARLIDFGSIVTT 389 (569)
T ss_dssp EECCCSEEHHHHHHTT-----CCCCHH---HHHHHHHHHHHHHH---HTTCEESCCCGGGEEECTTSCEEECCCTTEESC
T ss_pred EecCCCCcHHHHHHhC-----CCCCHH---HHHHHHHHHHHHHH---HCCceeccCchHhEEECCCCCEEEeecccCeeC
Confidence 9999999999999853 234443 57899999999999 789999999999999999999999999999866
Q ss_pred cCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCC
Q 002063 830 ENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPV 881 (973)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf 881 (973)
..... .....+||+.|+|||++.+ .+..++|+||+|++++++.++..++
T Consensus 390 ~~~~~--~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 390 PQDCS--WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp C---C--CSHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred CCCCc--cccCceechhhccHHHhCC-CCCCcccccccccchhhhccccchh
Confidence 44322 2334579999999999875 4677899999999988876665443
No 321
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=9.2e-26 Score=241.85 Aligned_cols=215 Identities=22% Similarity=0.277 Sum_probs=138.7
Q ss_pred CCCCcceeeeCCCCCceEEEeecCCCCCccccccccCCCCCcEEeCCCCcccCccCccccCCCCCcEEEecCCcccCCCC
Q 002063 59 SPCGFSGITCDSVTGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVP 138 (973)
Q Consensus 59 ~~c~w~gv~C~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~ 138 (973)
++|.|.|+.|.- .+.++.+++++++++ .+|..+. ++|++|+|++|++++..+..|+++++|++|+|++|.+...++
T Consensus 3 ~~C~~~~~~C~c-~~~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~ 78 (270)
T 2o6q_A 3 ALCKKDGGVCSC-NNNKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPA 78 (270)
T ss_dssp CCBGGGTCSBEE-ETTTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCT
T ss_pred ccCCCCCCCCEe-CCCCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeCh
Confidence 579999999964 345778999999988 4676554 678888888888887666678888888888888888887766
Q ss_pred C-cCCCCCCCEEeccCcccCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccccCCCCCChhhhccC
Q 002063 139 D-LSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELR 217 (973)
Q Consensus 139 ~-l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~ 217 (973)
. |.++++|++|+|++|.+++..+..|..+++|++|++++|.+ ++..+..|..++
T Consensus 79 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l-------------------------~~~~~~~~~~l~ 133 (270)
T 2o6q_A 79 GIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQL-------------------------KSLPPRVFDSLT 133 (270)
T ss_dssp TTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCC-------------------------CCCCTTTTTTCT
T ss_pred hhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCcc-------------------------CeeCHHHhCcCc
Confidence 5 57788888888888887755444555555555555555544 444444444555
Q ss_pred CCCeeeccccccccccchhhhccccccEEEeecccCCCCCCccccccccccEEEeeccccccccCCccCCCCCccEEEcc
Q 002063 218 ELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCF 297 (973)
Q Consensus 218 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 297 (973)
+|++|+|++|+|++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..+..+++|+.|+++
T Consensus 134 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 213 (270)
T 2o6q_A 134 KLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQ 213 (270)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEec
Confidence 55555555555543333344555555555555555554444445555566666666666554444445556666666666
Q ss_pred cCCCC
Q 002063 298 KNNFS 302 (973)
Q Consensus 298 ~N~l~ 302 (973)
+|.+.
T Consensus 214 ~N~~~ 218 (270)
T 2o6q_A 214 ENPWD 218 (270)
T ss_dssp SSCBC
T ss_pred CCCee
Confidence 66554
No 322
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=1.5e-27 Score=277.41 Aligned_cols=169 Identities=21% Similarity=0.204 Sum_probs=94.4
Q ss_pred cccceEecccccccccCCccccCCCCcceEeccCCcCCCCCCCccCCCCCCCEEEcccCCCCCCCChhhh-cCCCCCEEe
Q 002063 385 KTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELG-RLTNLERLI 463 (973)
Q Consensus 385 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~ 463 (973)
++|++|+|++|.|++..+.. +++|+.|+|++|.+++..+..++.+++|+.|+|++|.+++..|..+. .+++|+.|+
T Consensus 99 ~~L~~L~L~~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~ 175 (487)
T 3oja_A 99 PSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLN 175 (487)
T ss_dssp TTCCEEECCSSCCCCEEECC---CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEE
T ss_pred CCcCEEECcCCcCCCCCccc---cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEe
Confidence 45566666666665444332 34555555555555555555555556666666666666655555554 556666666
Q ss_pred cCCCcCCCCccccccccccCCEEEccCcccccCCCccccCccccchhhccccccccCCCccccccCCCCeeecCCCccC-
Q 002063 464 LTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLT- 542 (973)
Q Consensus 464 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~- 542 (973)
|++|.|++. | .+..+++|+.|+|++|+|++. |+.+..+++|+.|+|++|.|++ +|..+..+++|+.|+|++|++.
T Consensus 176 Ls~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c 251 (487)
T 3oja_A 176 LQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHC 251 (487)
T ss_dssp CTTSCCCEE-E-CCCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCH
T ss_pred cCCCccccc-c-ccccCCCCCEEECCCCCCCCC-CHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcC
Confidence 666666543 2 122356666666666666643 3335566666666666666663 4555666666666666666665
Q ss_pred CCCCchhhccc-CceEEcc
Q 002063 543 GSIPDNLMKLK-LSSIDLS 560 (973)
Q Consensus 543 ~~~p~~~~~l~-L~~l~ls 560 (973)
+.+|..+..++ ++.++++
T Consensus 252 ~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 252 GTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp HHHHHHHTTCHHHHHHHHH
T ss_pred cchHHHHHhCCCCcEEecc
Confidence 44455444443 4444443
No 323
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=6.8e-27 Score=271.95 Aligned_cols=237 Identities=18% Similarity=0.182 Sum_probs=174.6
Q ss_pred CCCCCcEEeCCCCcccCccCccccCCCCCcEEEecCCcccCCCCCcCCCCCCCEEeccCcccCCccccccccccccceEE
Q 002063 95 ALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLS 174 (973)
Q Consensus 95 ~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 174 (973)
.+++|++|+|++|.+++..|..|+.+++|++|+|++|.+++.++ ++.+++|++|+|++|.+++.. ..++|++|+
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~l~~l~-----~~~~L~~L~ 105 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD-LESLSTLRTLDLNNNYVQELL-----VGPSIETLH 105 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE-CTTCTTCCEEECCSSEEEEEE-----ECTTCCEEE
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc-cccCCCCCEEEecCCcCCCCC-----CCCCcCEEE
Confidence 34489999999999988778889999999999999999887666 888899999999999887533 237888888
Q ss_pred ccCCcCCCCCCcccccCCCCCCEEEcccccCCCCCChhhhccCCCCeeeccccccccccchhhh-ccccccEEEeecccC
Q 002063 175 IGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIR-KLQKLWKIELYANNL 253 (973)
Q Consensus 175 l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~-~l~~L~~L~L~~n~l 253 (973)
+++|.++.. +. ..+++|++|+|++|.+++..|..++.+++|++|+|++|.+++..|..+. .+++|++|+|++|.+
T Consensus 106 L~~N~l~~~--~~--~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l 181 (487)
T 3oja_A 106 AANNNISRV--SC--SRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFI 181 (487)
T ss_dssp CCSSCCCCE--EE--CCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCC
T ss_pred CcCCcCCCC--Cc--cccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcc
Confidence 888877642 22 3457788888888888877777778888888888888888877777765 677888888888887
Q ss_pred CCCCCccccccccccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCccccceeeccccccC-CCCCcc
Q 002063 254 TGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFS-GPFPEN 332 (973)
Q Consensus 254 ~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~-~~~~~~ 332 (973)
++. | .+..+++|+.|+|++|.+++ +|..+..+++|+.|++++|.+++ +|..+..+++|+.|++++|.+. +.+|..
T Consensus 182 ~~~-~-~~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~ 257 (487)
T 3oja_A 182 YDV-K-GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDF 257 (487)
T ss_dssp CEE-E-CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHH
T ss_pred ccc-c-ccccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHH
Confidence 754 2 23357778888888887774 44447777777777777777774 5666666677777777777665 445555
Q ss_pred ccccccccccccc
Q 002063 333 LGRYTALTDVDIS 345 (973)
Q Consensus 333 l~~l~~L~~L~Ls 345 (973)
+..++.|+.++++
T Consensus 258 ~~~l~~L~~l~~~ 270 (487)
T 3oja_A 258 FSKNQRVQTVAKQ 270 (487)
T ss_dssp HTTCHHHHHHHHH
T ss_pred HHhCCCCcEEecc
Confidence 5555555555554
No 324
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.93 E-value=9.2e-29 Score=297.48 Aligned_cols=415 Identities=15% Similarity=0.136 Sum_probs=258.9
Q ss_pred cEEeCCCCcccCccCccccCCCCCcEEEecCCcccC---CCC-C------------cCCCCCCCEEeccCcccCCccccc
Q 002063 100 TVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVG---SVP-D------------LSALKNLEIFDLSINYFTGRFPRW 163 (973)
Q Consensus 100 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~---~~~-~------------l~~l~~L~~L~Ls~n~l~~~~~~~ 163 (973)
+.+++++.... ..+..+..+++|++|+|+++.... ..+ . ...+++|++|+|++|.+++..+..
T Consensus 46 ~~l~~~~~~~~-~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~ 124 (594)
T 2p1m_B 46 RKVFIGNCYAV-SPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLEL 124 (594)
T ss_dssp CEEEESSTTSS-CHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHH
T ss_pred eEEeecccccc-CHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHH
Confidence 34555443221 112346778999999999986321 111 1 235678888888888887776666
Q ss_pred cc-cccccceEEccCC-cCCCCCCcccccCCCCCCEEEcccccCCCCCChhhh----ccCCCCeeeccccc--cccc-cc
Q 002063 164 VV-NLTQLVSLSIGDN-VYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESIS----ELRELGTLDICRNK--ISGE-FP 234 (973)
Q Consensus 164 ~~-~l~~L~~L~l~~n-~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~----~l~~L~~L~L~~n~--l~~~-~p 234 (973)
+. .+++|++|++++| .++...++..+.++++|++|+|++|.+++..+..+. .+++|++|++++|. ++.. ++
T Consensus 125 l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~ 204 (594)
T 2p1m_B 125 IAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALE 204 (594)
T ss_dssp HHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHH
T ss_pred HHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHH
Confidence 65 6788888888877 454333455556778888888888887765555444 45578888888776 2211 12
Q ss_pred hhhhccccccEEEeecc-cCCCCCCccccccccccEEEeecc-------ccccccCCccCCCCCccEEEcccCCCCCCCC
Q 002063 235 RSIRKLQKLWKIELYAN-NLTGELPAELGNLTLLQEFDISSN-------QMYGKLPEEIGNLKNLTVFQCFKNNFSGEFP 306 (973)
Q Consensus 235 ~~l~~l~~L~~L~L~~n-~l~~~~~~~l~~l~~L~~L~Ls~N-------~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 306 (973)
..+..+++|++|++++| .++ .++..+..+++|++|+++.+ .+.+ ++..+.++++|+.|.
T Consensus 205 ~l~~~~~~L~~L~L~~~~~~~-~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~-l~~~l~~~~~L~~Ls----------- 271 (594)
T 2p1m_B 205 RLVTRCPNLKSLKLNRAVPLE-KLATLLQRAPQLEELGTGGYTAEVRPDVYSG-LSVALSGCKELRCLS----------- 271 (594)
T ss_dssp HHHHHCTTCCEEECCTTSCHH-HHHHHHHHCTTCSEEECSBCCCCCCHHHHHH-HHHHHHTCTTCCEEE-----------
T ss_pred HHHHhCCCCcEEecCCCCcHH-HHHHHHhcCCcceEcccccccCccchhhHHH-HHHHHhcCCCccccc-----------
Confidence 22344577777777777 333 35566667777777774433 3332 233455555555552
Q ss_pred CCcCCccccceeeccccccCCCCCccccccccccccccccccccccCChhhhhhhhHHHHHhhhccCCCCCCCcccCccc
Q 002063 307 SGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKT 386 (973)
Q Consensus 307 ~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~nn~~~~~p~~~~~l~~ 386 (973)
.+.+... +.++..+..+++|++|+|++|.+++.... ..+..+++
T Consensus 272 ------------~~~~~~~-~~l~~~~~~~~~L~~L~L~~~~l~~~~l~-----------------------~~~~~~~~ 315 (594)
T 2p1m_B 272 ------------GFWDAVP-AYLPAVYSVCSRLTTLNLSYATVQSYDLV-----------------------KLLCQCPK 315 (594)
T ss_dssp ------------CCBTCCG-GGGGGGHHHHTTCCEEECTTCCCCHHHHH-----------------------HHHTTCTT
T ss_pred ------------CCcccch-hhHHHHHHhhCCCCEEEccCCCCCHHHHH-----------------------HHHhcCCC
Confidence 1111111 12333334556666666666665421110 11234566
Q ss_pred cceEeccccccccc-CCccccCCCCcceEecc---------CCcCCCCCCCcc-CCCCCCCEEEcccCCCCCCCChhhh-
Q 002063 387 IQRLRISDNHLSGK-IPDGLWALPNVGMLDFG---------DNDFTGGISPLI-GLSTSLSQLVLQNNRFSGELPSELG- 454 (973)
Q Consensus 387 L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~L~---------~N~l~~~~~~~~-~~~~~L~~L~L~~N~l~~~~p~~~~- 454 (973)
|++|++++| +... ++.....+++|+.|+++ .+.+++.....+ ..+++|+.|.+..|++++..+..+.
T Consensus 316 L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~ 394 (594)
T 2p1m_B 316 LQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIAR 394 (594)
T ss_dssp CCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHH
T ss_pred cCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHh
Confidence 666666666 3321 22222235666666663 334443222122 2368899999999999876666665
Q ss_pred cCCCCCEEecC--C----CcCCCC-----ccccccccccCCEEEccCcccccCCCccccC-ccccchhhccccccccCCC
Q 002063 455 RLTNLERLILT--N----NNFSGK-----IPSALGALRQLSSLHLEENALTGSIPNEMGD-CARIVDLNLARNSLSGNIP 522 (973)
Q Consensus 455 ~l~~L~~L~L~--~----N~l~~~-----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~~p 522 (973)
.+++|+.|+|+ + |.++.. ++..+..+++|+.|+|++ .+++..+..+.. +++|+.|+|++|.+++..+
T Consensus 395 ~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~ 473 (594)
T 2p1m_B 395 NRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGM 473 (594)
T ss_dssp HCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHH
T ss_pred hCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHH
Confidence 58999999999 4 666632 223367889999999988 676655555555 8899999999999987655
Q ss_pred ccc-cccCCCCeeecCCCccCCCCCc-hhhccc-CceEEccCCcccc
Q 002063 523 RSL-SLLSSLNALNLSGNKLTGSIPD-NLMKLK-LSSIDLSENQLSG 566 (973)
Q Consensus 523 ~~~-~~l~~L~~L~L~~N~l~~~~p~-~~~~l~-L~~l~ls~N~l~~ 566 (973)
..+ ..+++|+.|+|++|++++..+. ....++ |+.|++++|+++.
T Consensus 474 ~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~ 520 (594)
T 2p1m_B 474 HHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSF 520 (594)
T ss_dssp HHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBH
T ss_pred HHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCH
Confidence 555 6799999999999999644333 233354 9999999999853
No 325
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=4.5e-25 Score=238.52 Aligned_cols=207 Identities=23% Similarity=0.254 Sum_probs=185.7
Q ss_pred ccccccccccccccccccccCChhhhhhhhHHHHHhhhccCCCCCCCcccCccccceEecccccccccCCccccCCCCcc
Q 002063 333 LGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVG 412 (973)
Q Consensus 333 l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 412 (973)
+..+++++.+++++|.++ . +|..+. +++++|+|++|.|++..+..|..+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~------------------------ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~ 58 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-A------------------------LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLT 58 (290)
T ss_dssp EECSTTCCEEECTTSCCS-S------------------------CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCC
T ss_pred ccccCCccEEECCCCCCC-c------------------------CCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCC
Confidence 567788899999999887 3 333333 6899999999999988899999999999
Q ss_pred eEeccCCcCCCCCCCccCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEecCCCcCCCCccccccccccCCEEEccCcc
Q 002063 413 MLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENA 492 (973)
Q Consensus 413 ~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 492 (973)
.|+|++|++++.... +.+++|++|+|++|+++ .+|..+..+++|++|+|++|++++..|..|.++++|++|+|++|+
T Consensus 59 ~L~L~~n~l~~~~~~--~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~ 135 (290)
T 1p9a_G 59 QLNLDRAELTKLQVD--GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNE 135 (290)
T ss_dssp EEECTTSCCCEEECC--SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSC
T ss_pred EEECCCCccCcccCC--CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCC
Confidence 999999999987654 78899999999999999 788889999999999999999998888899999999999999999
Q ss_pred cccCCCccccCccccchhhccccccccCCCccccccCCCCeeecCCCccCCCCCchhhccc-CceEEccCCccccccCc
Q 002063 493 LTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLK-LSSIDLSENQLSGSVPL 570 (973)
Q Consensus 493 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-L~~l~ls~N~l~~~~p~ 570 (973)
|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+.... |+.++|++|+|.|.|..
T Consensus 136 l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~c~~ 213 (290)
T 1p9a_G 136 LKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCNCEI 213 (290)
T ss_dssp CCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCSGGG
T ss_pred CCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCcCcc
Confidence 99888888999999999999999999777777899999999999999999 6777776654 99999999999999864
No 326
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.92 E-value=1.1e-24 Score=233.46 Aligned_cols=206 Identities=21% Similarity=0.277 Sum_probs=186.3
Q ss_pred cccccccccccccccCChhhhhhhhHHHHHhhhccCCCCCCCcccCccccceEecccccccccCCccccCCCCcceEecc
Q 002063 338 ALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFG 417 (973)
Q Consensus 338 ~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 417 (973)
+.+.+++++|.++ .+| ..+. +++++|+|++|++++..+..|..+++|++|+++
T Consensus 17 ~~~~l~~~~~~l~-~ip------------------------~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 69 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIP------------------------SNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLN 69 (270)
T ss_dssp TTTEEECTTSCCS-SCC------------------------SCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECC
T ss_pred CCCEEEccCCCCC-ccC------------------------CCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECC
Confidence 4677889988887 333 3332 579999999999998888899999999999999
Q ss_pred CCcCCCCCCCccCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEecCCCcCCCCccccccccccCCEEEccCcccccCC
Q 002063 418 DNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSI 497 (973)
Q Consensus 418 ~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 497 (973)
+|+++..++..|..+++|++|+|++|++++..+..+..+++|++|+|++|++++..+..|..+++|++|+|++|++++..
T Consensus 70 ~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 149 (270)
T 2o6q_A 70 DNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLP 149 (270)
T ss_dssp SSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccC
Confidence 99999988888999999999999999999877788899999999999999999888889999999999999999999887
Q ss_pred CccccCccccchhhccccccccCCCccccccCCCCeeecCCCccCCCCCchhhccc-CceEEccCCccccccCc
Q 002063 498 PNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLK-LSSIDLSENQLSGSVPL 570 (973)
Q Consensus 498 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-L~~l~ls~N~l~~~~p~ 570 (973)
+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|++++..+..+..++ |+.|+|++|+|.|.|+.
T Consensus 150 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 223 (270)
T 2o6q_A 150 KGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCNG 223 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSSS
T ss_pred HhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCcc
Confidence 78899999999999999999988888899999999999999999976666677775 99999999999999873
No 327
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=3.5e-25 Score=238.33 Aligned_cols=190 Identities=20% Similarity=0.214 Sum_probs=122.8
Q ss_pred cccCccccceEecccccccccCCccccCCCCcceEeccCCcCCCCCCCccCCCCCCCEEEcccCCCCCCCChhhhcCCCC
Q 002063 380 SYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNL 459 (973)
Q Consensus 380 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L 459 (973)
.|.++++|++|+|++|++++..+..|..+++|++|+|++|++++..+..+..+++|++|++++|++.+..+..++.+++|
T Consensus 47 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 126 (276)
T 2z62_A 47 SFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTL 126 (276)
T ss_dssp TTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTC
T ss_pred HhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCC
Confidence 34445555555555555555555555556666666666666665555555666666666666666665555556666666
Q ss_pred CEEecCCCcCCCC-ccccccccccCCEEEccCcccccCCCccccCccccc----hhhccccccccCCCccccccCCCCee
Q 002063 460 ERLILTNNNFSGK-IPSALGALRQLSSLHLEENALTGSIPNEMGDCARIV----DLNLARNSLSGNIPRSLSLLSSLNAL 534 (973)
Q Consensus 460 ~~L~L~~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~----~L~Ls~N~l~~~~p~~~~~l~~L~~L 534 (973)
++|++++|++++. +|..+..+++|++|+|++|++++..+..+..+.+|+ .|++++|.+++..+..+. ..+|+.|
T Consensus 127 ~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~-~~~L~~L 205 (276)
T 2z62_A 127 KELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFK-EIRLKEL 205 (276)
T ss_dssp CEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSC-SCCEEEE
T ss_pred CEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccC-CCcccEE
Confidence 6666666666643 466666666777777777776666666666666665 667777777755544443 3478888
Q ss_pred ecCCCccCCCCCchhhccc-CceEEccCCccccccCc
Q 002063 535 NLSGNKLTGSIPDNLMKLK-LSSIDLSENQLSGSVPL 570 (973)
Q Consensus 535 ~L~~N~l~~~~p~~~~~l~-L~~l~ls~N~l~~~~p~ 570 (973)
+|++|++++..+..+..++ |+.|+|++|+|+|.||.
T Consensus 206 ~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 242 (276)
T 2z62_A 206 ALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 242 (276)
T ss_dssp ECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTT
T ss_pred ECCCCceeecCHhHhcccccccEEEccCCcccccCCc
Confidence 8888888865555566665 88888888888888874
No 328
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=1.6e-24 Score=233.11 Aligned_cols=208 Identities=21% Similarity=0.223 Sum_probs=169.3
Q ss_pred ccceeeccccccCCCCCccccccccccccccccccccccCChhhhhhhhHHHHHhhhccCCCCCCCcccCccccceEecc
Q 002063 314 KLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRIS 393 (973)
Q Consensus 314 ~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~Ls 393 (973)
+|++|++++|.+++..+..+..+++|++|+|++|++++. .+..|..+++|++|+|+
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~------------------------~~~~~~~l~~L~~L~L~ 84 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTI------------------------EDGAYQSLSHLSTLILT 84 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEE------------------------CTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCcc------------------------CHHHccCCcCCCEEECC
Confidence 456666666666655555666666777777777766522 22346667788888888
Q ss_pred cccccccCCccccCCCCcceEeccCCcCCCCCCCccCCCCCCCEEEcccCCCCCC-CChhhhcCCCCCEEecCCCcCCCC
Q 002063 394 DNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGE-LPSELGRLTNLERLILTNNNFSGK 472 (973)
Q Consensus 394 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~ 472 (973)
+|++++..+..|..+++|++|++++|++++..+..+..+++|++|+|++|++++. +|..+..+++|+.|+|++|++++.
T Consensus 85 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~ 164 (276)
T 2z62_A 85 GNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSI 164 (276)
T ss_dssp TCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEE
T ss_pred CCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcC
Confidence 8888877778888888888888888888887777788899999999999999864 689999999999999999999988
Q ss_pred ccccccccccCC----EEEccCcccccCCCccccCccccchhhccccccccCCCccccccCCCCeeecCCCccCCCCC
Q 002063 473 IPSALGALRQLS----SLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIP 546 (973)
Q Consensus 473 ~p~~~~~l~~L~----~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 546 (973)
.+..+..+++|+ .|++++|++++..+..+.. .+|+.|+|++|+|++..+..|..+++|+.|+|++|++++..|
T Consensus 165 ~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 165 YCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp CGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred CHHHhhhhhhccccceeeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 888888888888 9999999999776666654 489999999999998777778999999999999999997665
No 329
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=5.5e-25 Score=236.00 Aligned_cols=228 Identities=19% Similarity=0.206 Sum_probs=181.5
Q ss_pred ccccceeeccccccCCCCCccccccccccccccccccccccCChhhhhhhhHHHHHhhhccCCCCCCCcccCccccceEe
Q 002063 312 MRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLR 391 (973)
Q Consensus 312 l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~ 391 (973)
+.++..+++..+.+.+. ..+..+++|+.|++++|.++. + ..+..+++|++|+
T Consensus 18 ~~~l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~-------------------------~-~~l~~l~~L~~L~ 69 (272)
T 3rfs_A 18 FAETIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIKS-------------------------V-QGIQYLPNVRYLA 69 (272)
T ss_dssp HHHHHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCCC-------------------------C-TTGGGCTTCCEEE
T ss_pred HHHHHHHHhcCcccccc--cccccccceeeeeeCCCCccc-------------------------c-cccccCCCCcEEE
Confidence 34455556666655432 345667777888888777761 1 2356678888888
Q ss_pred cccccccccCCccccCCCCcceEeccCCcCCCCCCCccCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEecCCCcCCC
Q 002063 392 ISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSG 471 (973)
Q Consensus 392 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 471 (973)
|++|.+++. ..+..+++|++|++++|++++.++..+..+++|++|+|++|++++..+..+..+++|++|+|++|++++
T Consensus 70 l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 147 (272)
T 3rfs_A 70 LGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQS 147 (272)
T ss_dssp CTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCc
Confidence 888888752 367788888888888888888887778888889999999999987777778888999999999999987
Q ss_pred CccccccccccCCEEEccCcccccCCCccccCccccchhhccccccccCCCccccccCCCCeeecCCCccCCCCCchhhc
Q 002063 472 KIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMK 551 (973)
Q Consensus 472 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 551 (973)
..+..+..+++|+.|+|++|++++..+..++.+++|+.|+|++|++++..|..|..+++|+.|+|++|++.+..|.
T Consensus 148 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~---- 223 (272)
T 3rfs_A 148 LPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPG---- 223 (272)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT----
T ss_pred cCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCcH----
Confidence 7777788899999999999999988777888899999999999999988888888999999999999999876653
Q ss_pred ccCceEEccCCccccccCcccccC
Q 002063 552 LKLSSIDLSENQLSGSVPLDFLRM 575 (973)
Q Consensus 552 l~L~~l~ls~N~l~~~~p~~~~~~ 575 (973)
++.++++.|.++|.+|..+...
T Consensus 224 --l~~l~~~~n~~~g~ip~~~~~~ 245 (272)
T 3rfs_A 224 --IRYLSEWINKHSGVVRNSAGSV 245 (272)
T ss_dssp --THHHHHHHHHTGGGBBCTTSCB
T ss_pred --HHHHHHHHHhCCCcccCccccc
Confidence 6778889999999999765433
No 330
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=2.2e-24 Score=231.35 Aligned_cols=224 Identities=18% Similarity=0.193 Sum_probs=118.0
Q ss_pred CCCcEEeCCCCcccCccCccccCCCCCcEEEecCCcccCCCCCcCCCCCCCEEeccCcccCCccccccccccccceEEcc
Q 002063 97 QSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIG 176 (973)
Q Consensus 97 ~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~ 176 (973)
..+..+++..+.+.+. ..+..+++|+.|++++|.+.. ++.++.+++|++|+|++|.+++. ..+
T Consensus 19 ~~l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~-~~~l~~l~~L~~L~l~~n~l~~~--~~l------------ 81 (272)
T 3rfs_A 19 AETIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIKS-VQGIQYLPNVRYLALGGNKLHDI--SAL------------ 81 (272)
T ss_dssp HHHHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCCC-CTTGGGCTTCCEEECTTSCCCCC--GGG------------
T ss_pred HHHHHHHhcCcccccc--cccccccceeeeeeCCCCccc-ccccccCCCCcEEECCCCCCCCc--hhh------------
Confidence 3444555555555433 234556666666666666554 23456666666666666666531 233
Q ss_pred CCcCCCCCCcccccCCCCCCEEEcccccCCCCCChhhhccCCCCeeeccccccccccchhhhccccccEEEeecccCCCC
Q 002063 177 DNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGE 256 (973)
Q Consensus 177 ~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~ 256 (973)
+.+++|++|+|++|.+++..+..+..+++|++|+|++|++++..+..++.+++|++|+|++|++++.
T Consensus 82 -------------~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 148 (272)
T 3rfs_A 82 -------------KELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSL 148 (272)
T ss_dssp -------------TTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred -------------cCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCcc
Confidence 3444444444444444444444444445555555555555444444444555555555555555544
Q ss_pred CCccccccccccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCccccceeeccccccCCCCCcccccc
Q 002063 257 LPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRY 336 (973)
Q Consensus 257 ~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l 336 (973)
.+..+..+++|++|++++|++++..+..+..+++|+.|++++|++++..+..+..+++|+.|++++|.+.+. +
T Consensus 149 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~ 221 (272)
T 3rfs_A 149 PKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------C 221 (272)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------T
T ss_pred CHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------C
Confidence 444445555555555555555544444455555555555555555555554555555555555555555432 3
Q ss_pred ccccccccccccccccCChhh
Q 002063 337 TALTDVDISENQFSGSFPKYL 357 (973)
Q Consensus 337 ~~L~~L~Ls~N~l~~~~p~~~ 357 (973)
++|+.|+++.|.++|.+|.++
T Consensus 222 ~~l~~l~~~~n~~~g~ip~~~ 242 (272)
T 3rfs_A 222 PGIRYLSEWINKHSGVVRNSA 242 (272)
T ss_dssp TTTHHHHHHHHHTGGGBBCTT
T ss_pred cHHHHHHHHHHhCCCcccCcc
Confidence 345666666666665555544
No 331
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.91 E-value=9.8e-26 Score=250.32 Aligned_cols=265 Identities=15% Similarity=0.223 Sum_probs=181.9
Q ss_pred CCCcceeeeCCCCCceEEEeecCCCCCccccccccCC--CCCcEEeCCCCcccCccCccccCCCCCcEEEecCCcccCC-
Q 002063 60 PCGFSGITCDSVTGRVTEISFDNKSLSGEISSSISAL--QSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGS- 136 (973)
Q Consensus 60 ~c~w~gv~C~~~~~~v~~l~l~~~~l~~~~~~~l~~l--~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~- 136 (973)
|+.|.++.|+. ..++.++++++.+. +..+..+ ++++.|++++|.+++..+. +..+++|++|+|++|.+.+.
T Consensus 36 c~~W~~~~~~~--~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~ 109 (336)
T 2ast_B 36 CKRWYRLASDE--SLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVST 109 (336)
T ss_dssp CHHHHHHHTCS--TTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHH
T ss_pred HHHHHHHhcCc--hhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHH
Confidence 56899999863 45788999888877 4556666 8888888888888876554 56788888888888887653
Q ss_pred C-CCcCCCCCCCEEeccCcccCCccccccccccccceEEccCC-cCCCCCCcccccCCCCCCEEEcccc-cCCCC-CChh
Q 002063 137 V-PDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDN-VYDEAEIPESIGNLKNLTYLFLAHC-NLRGR-IPES 212 (973)
Q Consensus 137 ~-~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n-~l~~~~ip~~~~~l~~L~~L~L~~n-~l~~~-~p~~ 212 (973)
. ..+..+++|++|+|++|.+++..+..++.+++|++|++++| .++...++..+.++++|++|++++| .+++. ++..
T Consensus 110 ~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~ 189 (336)
T 2ast_B 110 LHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVA 189 (336)
T ss_dssp HHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHH
T ss_pred HHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHH
Confidence 3 34777888888888888888777777888888888888887 5654445666777788888888888 77653 4566
Q ss_pred hhccC-CCCeeecccc--ccc-cccchhhhccccccEEEeeccc-CCCCCCccccccccccEEEeeccc-cccccCCccC
Q 002063 213 ISELR-ELGTLDICRN--KIS-GEFPRSIRKLQKLWKIELYANN-LTGELPAELGNLTLLQEFDISSNQ-MYGKLPEEIG 286 (973)
Q Consensus 213 l~~l~-~L~~L~L~~n--~l~-~~~p~~l~~l~~L~~L~L~~n~-l~~~~~~~l~~l~~L~~L~Ls~N~-l~~~~p~~~~ 286 (973)
+..++ +|++|+|++| .++ +.+|..+..+++|++|++++|. +++..+..+..+++|++|++++|. +.......+.
T Consensus 190 ~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~ 269 (336)
T 2ast_B 190 VAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELG 269 (336)
T ss_dssp HHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGG
T ss_pred HHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHh
Confidence 77777 7888888777 444 3456666777777777777777 665666667777777777777774 2222222455
Q ss_pred CCCCccEEEcccCCCCCCCCCCcCCcc-ccceeeccccccCCCCCcccc
Q 002063 287 NLKNLTVFQCFKNNFSGEFPSGFGDMR-KLFAFSIYGNRFSGPFPENLG 334 (973)
Q Consensus 287 ~l~~L~~L~l~~N~l~~~~p~~~~~l~-~L~~L~l~~N~l~~~~~~~l~ 334 (973)
++++|+.|++++| ++. ..+..+. .|..|++++|++++..|..++
T Consensus 270 ~~~~L~~L~l~~~-i~~---~~~~~l~~~l~~L~l~~n~l~~~~~~~~~ 314 (336)
T 2ast_B 270 EIPTLKTLQVFGI-VPD---GTLQLLKEALPHLQINCSHFTTIARPTIG 314 (336)
T ss_dssp GCTTCCEEECTTS-SCT---TCHHHHHHHSTTSEESCCCSCCTTCSSCS
T ss_pred cCCCCCEEeccCc-cCH---HHHHHHHhhCcceEEecccCccccCCccc
Confidence 6666666666666 221 1233332 245555555555555554444
No 332
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.90 E-value=9.5e-25 Score=255.81 Aligned_cols=184 Identities=20% Similarity=0.202 Sum_probs=144.3
Q ss_pred cccCeecccCcEEEEEEEEcCCCceEEEEEeecc----------ccHHHHHHHHHHHHhcCCCceeeEeEEEEeCCeeEE
Q 002063 679 EEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----------DGVKVFAAEMEILGKIRHRNILKLYACLLKGGSSFL 748 (973)
Q Consensus 679 ~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----------~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 748 (973)
...+.||+|+||+||+|... ++.+|+|+.... ...+++.+|++++++++||||+++..++..++..|+
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~l 416 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSYL--DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRI 416 (540)
T ss_dssp ---------CCEEEEEEECS--SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEE
T ss_pred CCCCEEeeCCCEEEEEEEEC--CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEE
Confidence 44678999999999999544 778999975431 113457899999999999999977666667788899
Q ss_pred EEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCcc
Q 002063 749 VLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKI 828 (973)
Q Consensus 749 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~ 828 (973)
||||+++++|.+++.. +..++.|+++||+||| +++|+||||||+||+++. .+||+|||+++.
T Consensus 417 VmE~~~ggsL~~~l~~-------------~~~i~~qi~~aL~~LH---~~gIiHrDiKp~NILl~~--~~kL~DFGla~~ 478 (540)
T 3en9_A 417 MMSYINGKLAKDVIED-------------NLDIAYKIGEIVGKLH---KNDVIHNDLTTSNFIFDK--DLYIIDFGLGKI 478 (540)
T ss_dssp EEECCCSEEHHHHSTT-------------CTHHHHHHHHHHHHHH---HTTEECTTCCTTSEEESS--SEEECCCTTCEE
T ss_pred EEECCCCCCHHHHHHH-------------HHHHHHHHHHHHHHHH---HCcCccCCCCHHHEEECC--eEEEEECccCEE
Confidence 9999999999998863 4578999999999999 789999999999999999 999999999987
Q ss_pred ccCCCCcc-----cccccCccccccccccccc--CCCCccchHHHHHHHHHHHHhCCCCCC
Q 002063 829 AENSPKVS-----DYSCFAGTHGYIAPELAYT--CKVSEKSDVFSFGVVLLELVTGRKPVE 882 (973)
Q Consensus 829 ~~~~~~~~-----~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~~l~ell~g~~pf~ 882 (973)
........ ......||+.|+|||++.. ..|+..+|+|+..+-..+-+.++.+|.
T Consensus 479 ~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 479 SNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred CCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 75432111 1124579999999999976 568888999999999888888777764
No 333
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.90 E-value=7.6e-25 Score=245.39 Aligned_cols=261 Identities=16% Similarity=0.166 Sum_probs=135.8
Q ss_pred EeecCCCCCccccccccCCCCCcEEeCCCCcccCccC----ccccCCC-CCcEEEecCCcccCCCC-CcCCC-----CCC
Q 002063 78 ISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLP----LELSNCS-NLKVLNVTGNAMVGSVP-DLSAL-----KNL 146 (973)
Q Consensus 78 l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p----~~l~~l~-~L~~L~L~~n~l~~~~~-~l~~l-----~~L 146 (973)
.+++.++++|.+|..+...++|++|+|++|.+++..+ ..|..++ +|++|+|++|.+.+..+ .+..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 3556666666666666666666666666666665444 4555666 66666666666655433 23332 566
Q ss_pred CEEeccCcccCCccccccccccccceEEccCCcCCCCCCcccccCC-CCCCEEEcccccCCCCCChhhhc-----cCCCC
Q 002063 147 EIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNL-KNLTYLFLAHCNLRGRIPESISE-----LRELG 220 (973)
Q Consensus 147 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l-~~L~~L~L~~n~l~~~~p~~l~~-----l~~L~ 220 (973)
++|+|++|.+++..+..+... +..+ ++|++|+|++|++++..+..+.. .++|+
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~---------------------l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~ 141 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKT---------------------LAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASIT 141 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHH---------------------HHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCC
T ss_pred cEEECcCCcCChHHHHHHHHH---------------------HHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCcee
Confidence 666666666655444433332 2222 34444444444444333333222 13444
Q ss_pred eeeccccccccccc----hhhhccc-cccEEEeecccCCCCCCcccc----cc-ccccEEEeeccccccc----cCCccC
Q 002063 221 TLDICRNKISGEFP----RSIRKLQ-KLWKIELYANNLTGELPAELG----NL-TLLQEFDISSNQMYGK----LPEEIG 286 (973)
Q Consensus 221 ~L~L~~n~l~~~~p----~~l~~l~-~L~~L~L~~n~l~~~~~~~l~----~l-~~L~~L~Ls~N~l~~~----~p~~~~ 286 (973)
+|+|++|++++..+ ..+..++ +|++|+|++|++++..+..+. .+ ++|++|+|++|.+.+. ++..+.
T Consensus 142 ~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~ 221 (362)
T 3goz_A 142 SLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFS 221 (362)
T ss_dssp EEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHH
T ss_pred EEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHh
Confidence 45555444443222 2222332 455555555555443333222 22 3555555555555431 233333
Q ss_pred C-CCCccEEEcccCCCCCCCC----CCcCCccccceeeccccccCCCC-------CccccccccccccccccccccccCC
Q 002063 287 N-LKNLTVFQCFKNNFSGEFP----SGFGDMRKLFAFSIYGNRFSGPF-------PENLGRYTALTDVDISENQFSGSFP 354 (973)
Q Consensus 287 ~-l~~L~~L~l~~N~l~~~~p----~~~~~l~~L~~L~l~~N~l~~~~-------~~~l~~l~~L~~L~Ls~N~l~~~~p 354 (973)
. .++|+.|++++|.+++..+ ..+..+++|+.|++++|.+.+.. +..+..+++|+.||+++|++.+..+
T Consensus 222 ~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~ 301 (362)
T 3goz_A 222 SIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHS 301 (362)
T ss_dssp HSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGC
T ss_pred cCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcch
Confidence 3 2355555555555554332 23445566666666666644332 3356677888999999999887766
Q ss_pred hhhhh
Q 002063 355 KYLCE 359 (973)
Q Consensus 355 ~~~~~ 359 (973)
..+..
T Consensus 302 ~~~~~ 306 (362)
T 3goz_A 302 IPISN 306 (362)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55543
No 334
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.90 E-value=4.8e-23 Score=222.61 Aligned_cols=202 Identities=23% Similarity=0.265 Sum_probs=108.0
Q ss_pred ccCCCCCcEEEecCCcccCCCCCcCCCCCCCEEeccCcccCCccccccccccccceEEccCCcCCCCCCcccccCCCCCC
Q 002063 117 LSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLT 196 (973)
Q Consensus 117 l~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~ 196 (973)
++++++|+.+++++|.++..++.+. ++++.|+|++|.+++..+..|.++++|++|++++|.++. ++.. +.+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~--~~~~-~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLTALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK--LQVD-GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCSSCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE--EECC-SCCTTCC
T ss_pred ccccCCccEEECCCCCCCcCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCc--ccCC-CCCCcCC
Confidence 4555566666666666665555443 466666666666665555666666666666666665542 2222 4556666
Q ss_pred EEEcccccCCCCCChhhhccCCCCeeeccccccccccchhhhccccccEEEeecccCCCCCCccccccccccEEEeeccc
Q 002063 197 YLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQ 276 (973)
Q Consensus 197 ~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~ 276 (973)
+|+|++|+++ .+|..+..+++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 159 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN 159 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCc
Confidence 6666666665 445555555666666666665554444455555555555555555554444444555555555555555
Q ss_pred cccccCCccCCCCCccEEEcccCCCCCCCCCCcCCccccceeecccccc
Q 002063 277 MYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRF 325 (973)
Q Consensus 277 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l 325 (973)
+++..+..+..+++|+.|++++|+++ .+|..+..+++|+.|++++|.+
T Consensus 160 l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~ 207 (290)
T 1p9a_G 160 LTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPW 207 (290)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCB
T ss_pred CCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCc
Confidence 55333333444555555555555544 3333333333344444444333
No 335
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.89 E-value=6.2e-23 Score=217.23 Aligned_cols=177 Identities=24% Similarity=0.272 Sum_probs=87.6
Q ss_pred ceEecccccccccCCccccCCCCcceEeccCCcCCCCCCCccCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEecCCC
Q 002063 388 QRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNN 467 (973)
Q Consensus 388 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 467 (973)
++++++++.++ .+|..+. ++++.|+|++|++++..+..|..+++|++|+|++|++++..|..|..+++|++|+|++|
T Consensus 17 ~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 93 (251)
T 3m19_A 17 KEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANN 93 (251)
T ss_dssp TEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTS
T ss_pred eEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCC
Confidence 34444444444 2333222 34444444444444444444444455555555555555444444555555555555555
Q ss_pred cCCCCccccccccccCCEEEccCcccccCCCccccCccccchhhccccccccCCCccccccCCCCeeecCCCccCCCCCc
Q 002063 468 NFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPD 547 (973)
Q Consensus 468 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 547 (973)
++++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|++|+|++|+|++..|.
T Consensus 94 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 173 (251)
T 3m19_A 94 QLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHG 173 (251)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred cccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHH
Confidence 55544444455555555555555555544444445555555555555555544444455555555555555555544444
Q ss_pred hhhccc-CceEEccCCccccc
Q 002063 548 NLMKLK-LSSIDLSENQLSGS 567 (973)
Q Consensus 548 ~~~~l~-L~~l~ls~N~l~~~ 567 (973)
.+..++ |+.|+|++|+|+|.
T Consensus 174 ~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 174 AFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TTTTCTTCCEEECCSCCBCTT
T ss_pred HHhCCCCCCEEEeeCCceeCC
Confidence 444443 55555555555554
No 336
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=9.7e-25 Score=244.53 Aligned_cols=262 Identities=15% Similarity=0.139 Sum_probs=140.1
Q ss_pred eeeccccccccccchhhhccccccEEEeecccCCCCCC----ccccccc-cccEEEeeccccccccCCccCCC-----CC
Q 002063 221 TLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELP----AELGNLT-LLQEFDISSNQMYGKLPEEIGNL-----KN 290 (973)
Q Consensus 221 ~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~----~~l~~l~-~L~~L~Ls~N~l~~~~p~~~~~l-----~~ 290 (973)
.++++.|.+++.+|..+...++|++|+|++|.+++..+ ..+..++ +|++|+|++|++.+..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 35677788887777776666678888888888776555 5566666 77777777777776656555554 66
Q ss_pred ccEEEcccCCCCCCCCCCcCC----c-cccceeeccccccCCCCCccccc-----cccccccccccccccccCChhhhhh
Q 002063 291 LTVFQCFKNNFSGEFPSGFGD----M-RKLFAFSIYGNRFSGPFPENLGR-----YTALTDVDISENQFSGSFPKYLCEK 360 (973)
Q Consensus 291 L~~L~l~~N~l~~~~p~~~~~----l-~~L~~L~l~~N~l~~~~~~~l~~-----l~~L~~L~Ls~N~l~~~~p~~~~~~ 360 (973)
|++|++++|.+++..+..+.. + ++|+.|++++|++++..+..+.. .++|++|+|++|++++..+..++..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 777777777666554443322 2 45555555555555444433322 1345555555555543333222211
Q ss_pred hhHHHHHhhhccCCCCCCCcccCcc-ccceEecccccccccCCccccCCCCcceEeccCCcCCCCCCCccCCC-CCCCEE
Q 002063 361 RKLLNLLALSNNFSGEVPNSYADCK-TIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLS-TSLSQL 438 (973)
Q Consensus 361 ~~ll~ll~l~nn~~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~-~~L~~L 438 (973)
+..++ +|++|+|++|+|++..+..+.. .+... ++|++|
T Consensus 162 --------------------l~~~~~~L~~L~Ls~n~l~~~~~~~l~~--------------------~l~~~~~~L~~L 201 (362)
T 3goz_A 162 --------------------LAAIPANVNSLNLRGNNLASKNCAELAK--------------------FLASIPASVTSL 201 (362)
T ss_dssp --------------------HHTSCTTCCEEECTTSCGGGSCHHHHHH--------------------HHHTSCTTCCEE
T ss_pred --------------------HhcCCccccEeeecCCCCchhhHHHHHH--------------------HHHhCCCCCCEE
Confidence 11122 4555555555554333322211 11122 355555
Q ss_pred EcccCCCCCC----CChhhhc-CCCCCEEecCCCcCCCCcc----ccccccccCCEEEccCcccccCC-------Ccccc
Q 002063 439 VLQNNRFSGE----LPSELGR-LTNLERLILTNNNFSGKIP----SALGALRQLSSLHLEENALTGSI-------PNEMG 502 (973)
Q Consensus 439 ~L~~N~l~~~----~p~~~~~-l~~L~~L~L~~N~l~~~~p----~~~~~l~~L~~L~Ls~N~l~~~~-------p~~~~ 502 (973)
+|++|++++. ++..+.. .++|+.|+|++|++++..+ ..+..+++|+.|+|++|++.+.. +..+.
T Consensus 202 ~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~ 281 (362)
T 3goz_A 202 DLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFP 281 (362)
T ss_dssp ECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTST
T ss_pred ECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhc
Confidence 5555555532 2333333 2366666666666654433 23344566666666666643222 22344
Q ss_pred CccccchhhccccccccCCC
Q 002063 503 DCARIVDLNLARNSLSGNIP 522 (973)
Q Consensus 503 ~l~~L~~L~Ls~N~l~~~~p 522 (973)
.+++|+.||+++|.+....+
T Consensus 282 ~l~~L~~LdL~~N~l~~~~~ 301 (362)
T 3goz_A 282 NIQKIILVDKNGKEIHPSHS 301 (362)
T ss_dssp TCCEEEEECTTSCBCCGGGC
T ss_pred cCCceEEEecCCCcCCCcch
Confidence 55556666666666554433
No 337
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.89 E-value=3.5e-24 Score=237.82 Aligned_cols=252 Identities=15% Similarity=0.182 Sum_probs=214.1
Q ss_pred CCcEEeCCCCcccCccCccccCC--CCCcEEEecCCcccCCCCCcCCCCCCCEEeccCcccCCc-cccccccccccceEE
Q 002063 98 SLTVLSLPFNVLSGKLPLELSNC--SNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGR-FPRWVVNLTQLVSLS 174 (973)
Q Consensus 98 ~L~~L~Ls~n~l~~~~p~~l~~l--~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~-~~~~~~~l~~L~~L~ 174 (973)
.++.|++++|.+. |..+..+ ++++.|++++|.+.+.++.+..+++|++|+|++|.+++. ++..+..+++|++|+
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~ 124 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLS 124 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchhhccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEe
Confidence 4789999999887 5677888 999999999999999998888999999999999999876 888999999999999
Q ss_pred ccCCcCCCCCCcccccCCCCCCEEEcccc-cCCCC-CChhhhccCCCCeeecccc-ccccc-cchhhhccc-cccEEEee
Q 002063 175 IGDNVYDEAEIPESIGNLKNLTYLFLAHC-NLRGR-IPESISELRELGTLDICRN-KISGE-FPRSIRKLQ-KLWKIELY 249 (973)
Q Consensus 175 l~~n~l~~~~ip~~~~~l~~L~~L~L~~n-~l~~~-~p~~l~~l~~L~~L~L~~n-~l~~~-~p~~l~~l~-~L~~L~L~ 249 (973)
+++|.++. ..|..++.+++|++|+|++| .+++. ++..+..+++|++|++++| .+++. ++..+..++ +|++|+++
T Consensus 125 L~~~~l~~-~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~ 203 (336)
T 2ast_B 125 LEGLRLSD-PIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLS 203 (336)
T ss_dssp CTTCBCCH-HHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECC
T ss_pred CcCcccCH-HHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeC
Confidence 99998764 35778899999999999999 67753 6777899999999999999 99865 678899999 99999999
Q ss_pred cc--cCC-CCCCccccccccccEEEeeccc-cccccCCccCCCCCccEEEcccCC-CCCCCCCCcCCccccceeeccccc
Q 002063 250 AN--NLT-GELPAELGNLTLLQEFDISSNQ-MYGKLPEEIGNLKNLTVFQCFKNN-FSGEFPSGFGDMRKLFAFSIYGNR 324 (973)
Q Consensus 250 ~n--~l~-~~~~~~l~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~l~~N~-l~~~~p~~~~~l~~L~~L~l~~N~ 324 (973)
+| .++ +.++..+..+++|++|++++|. +++..+..+.++++|+.|++++|. +.......++.+++|+.|++++|
T Consensus 204 ~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~- 282 (336)
T 2ast_B 204 GYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI- 282 (336)
T ss_dssp SCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-
T ss_pred CCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-
Confidence 99 555 4567778889999999999999 777888899999999999999995 33333336888999999999999
Q ss_pred cCCCCCcccccc-ccccccccccccccccCChhh
Q 002063 325 FSGPFPENLGRY-TALTDVDISENQFSGSFPKYL 357 (973)
Q Consensus 325 l~~~~~~~l~~l-~~L~~L~Ls~N~l~~~~p~~~ 357 (973)
++ .+.+..+ .+|+.|++++|++++..|..+
T Consensus 283 i~---~~~~~~l~~~l~~L~l~~n~l~~~~~~~~ 313 (336)
T 2ast_B 283 VP---DGTLQLLKEALPHLQINCSHFTTIARPTI 313 (336)
T ss_dssp SC---TTCHHHHHHHSTTSEESCCCSCCTTCSSC
T ss_pred cC---HHHHHHHHhhCcceEEecccCccccCCcc
Confidence 43 2345555 358889999999998777654
No 338
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=1.1e-22 Score=222.61 Aligned_cols=222 Identities=16% Similarity=0.177 Sum_probs=105.9
Q ss_pred CCcEEeCCCCcccCccCc---cccCCCCCcEEEecCCcccCCCCC-c--CCCCCCCEEeccCcccCCccc----cccccc
Q 002063 98 SLTVLSLPFNVLSGKLPL---ELSNCSNLKVLNVTGNAMVGSVPD-L--SALKNLEIFDLSINYFTGRFP----RWVVNL 167 (973)
Q Consensus 98 ~L~~L~Ls~n~l~~~~p~---~l~~l~~L~~L~L~~n~l~~~~~~-l--~~l~~L~~L~Ls~n~l~~~~~----~~~~~l 167 (973)
.++.|.+.++.++...-. .+..+++|++|+|++|.+.+..+. + ..+++|++|+|++|.+++..+ ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 355566665555421100 122234566666666666655443 3 566666666666666654333 223344
Q ss_pred cccceEEccCCcCCCCCCcccccCCCCCCEEEcccccCCCCCChhhhccCCCCeeeccccccccc--cc--hhhhccccc
Q 002063 168 TQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGE--FP--RSIRKLQKL 243 (973)
Q Consensus 168 ~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~--~p--~~l~~l~~L 243 (973)
++|++|++++|. +++..+..++.+++|++|+|++|++.+. ++ ..++.+++|
T Consensus 145 ~~L~~L~Ls~n~-------------------------l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L 199 (310)
T 4glp_A 145 PGLKVLSIAQAH-------------------------SPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAI 199 (310)
T ss_dssp SCCCEEEEECCS-------------------------SCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCC
T ss_pred cCCCEEEeeCCC-------------------------cchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCC
Confidence 455555555554 4444444444444444444444444321 11 112344444
Q ss_pred cEEEeecccCCCCCCc----cccccccccEEEeeccccccccCCccCCC---CCccEEEcccCCCCCCCCCCcCCccccc
Q 002063 244 WKIELYANNLTGELPA----ELGNLTLLQEFDISSNQMYGKLPEEIGNL---KNLTVFQCFKNNFSGEFPSGFGDMRKLF 316 (973)
Q Consensus 244 ~~L~L~~n~l~~~~~~----~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L~l~~N~l~~~~p~~~~~l~~L~ 316 (973)
++|+|++|+++ .++. .+..+++|++|+|++|++.+..|..+..+ ++|++|++++|+|+ .+|..+. ++|+
T Consensus 200 ~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~ 275 (310)
T 4glp_A 200 QNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLR 275 (310)
T ss_dssp CSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCS
T ss_pred CEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCC
Confidence 44444444444 1111 12344455555555555554444444443 35555555555555 3344332 4555
Q ss_pred eeeccccccCCCCCcccccccccccccccccccc
Q 002063 317 AFSIYGNRFSGPFPENLGRYTALTDVDISENQFS 350 (973)
Q Consensus 317 ~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~ 350 (973)
.|++++|++++. |. +..+++|+.|+|++|+++
T Consensus 276 ~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 276 VLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp CEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTS
T ss_pred EEECCCCcCCCC-ch-hhhCCCccEEECcCCCCC
Confidence 555555555532 22 345556666666666654
No 339
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=3.1e-22 Score=211.88 Aligned_cols=178 Identities=20% Similarity=0.247 Sum_probs=163.8
Q ss_pred HhhhccCCCCCCCcccCccccceEecccccccccCCccccCCCCcceEeccCCcCCCCCCCccCCCCCCCEEEcccCCCC
Q 002063 367 LALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFS 446 (973)
Q Consensus 367 l~l~nn~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~ 446 (973)
+..+++-...+|..+. ++++.|+|++|.+++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|+++
T Consensus 19 l~~~~~~l~~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 96 (251)
T 3m19_A 19 VDCQGKSLDSVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLA 96 (251)
T ss_dssp EECTTCCCSSCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCC
T ss_pred EecCCCCccccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCccc
Confidence 3445666677887766 68999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChhhhcCCCCCEEecCCCcCCCCccccccccccCCEEEccCcccccCCCccccCccccchhhccccccccCCCcccc
Q 002063 447 GELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLS 526 (973)
Q Consensus 447 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 526 (973)
+..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|+|++..+..|+.+++|+.|+|++|+|++..+..|.
T Consensus 97 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 176 (251)
T 3m19_A 97 SLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFD 176 (251)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTT
T ss_pred ccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHh
Confidence 88888899999999999999999988888899999999999999999988888899999999999999999988888999
Q ss_pred ccCCCCeeecCCCccCCCCC
Q 002063 527 LLSSLNALNLSGNKLTGSIP 546 (973)
Q Consensus 527 ~l~~L~~L~L~~N~l~~~~p 546 (973)
.+++|+.|+|++|++++...
T Consensus 177 ~l~~L~~L~l~~N~~~c~~~ 196 (251)
T 3m19_A 177 RLGKLQTITLFGNQFDCSRC 196 (251)
T ss_dssp TCTTCCEEECCSCCBCTTST
T ss_pred CCCCCCEEEeeCCceeCCcc
Confidence 99999999999999997633
No 340
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.88 E-value=3.1e-23 Score=227.05 Aligned_cols=226 Identities=15% Similarity=0.156 Sum_probs=141.7
Q ss_pred ceEEEeecCCCCCccccc---cccCCCCCcEEeCCCCcccCccCccc--cCCCCCcEEEecCCcccCCCCC-----cCCC
Q 002063 74 RVTEISFDNKSLSGEISS---SISALQSLTVLSLPFNVLSGKLPLEL--SNCSNLKVLNVTGNAMVGSVPD-----LSAL 143 (973)
Q Consensus 74 ~v~~l~l~~~~l~~~~~~---~l~~l~~L~~L~Ls~n~l~~~~p~~l--~~l~~L~~L~L~~n~l~~~~~~-----l~~l 143 (973)
++..+.+.+..++...-. ....+++|++|+|++|.+++..|..+ +.+++|++|+|++|.+.+..+. +..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 356666766666543211 22345779999999999999999998 9999999999999999986553 4579
Q ss_pred CCCCEEeccCcccCCccccccccccccceEEccCCcCCCC-CC--cccccCCCCCCEEEcccccCCCCCCh----hhhcc
Q 002063 144 KNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEA-EI--PESIGNLKNLTYLFLAHCNLRGRIPE----SISEL 216 (973)
Q Consensus 144 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-~i--p~~~~~l~~L~~L~L~~n~l~~~~p~----~l~~l 216 (973)
++|++|+|++|.+++..+..|..+++|++|++++|.+... .+ +..++.+++|++|+|++|+++ .++. .++.+
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l 223 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAG 223 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHT
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcC
Confidence 9999999999999988778888888888888888875321 01 122345566666666666665 2222 13444
Q ss_pred CCCCeeeccccccccccchhhhccccccEEEeecccCCCCCCccccccccccEEEeeccccccccCCccCCCCCccEEEc
Q 002063 217 RELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQC 296 (973)
Q Consensus 217 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 296 (973)
++|++|+|++|+|++..|..+..+. .+++|++|+|++|+++ .+|..+. ++|+.|++
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~---------------------~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~L 279 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCM---------------------WSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDL 279 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCC---------------------CCTTCCCEECCSSCCC-SCCSCCC--SCCSCEEC
T ss_pred CCCCEEECCCCCCCccchhhHHhcc---------------------CcCcCCEEECCCCCCC-chhhhhc--CCCCEEEC
Confidence 5555555555555544444444331 0135555555555554 3444442 45555555
Q ss_pred ccCCCCCCCCCCcCCccccceeeccccccC
Q 002063 297 FKNNFSGEFPSGFGDMRKLFAFSIYGNRFS 326 (973)
Q Consensus 297 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 326 (973)
++|+|++. |. +..+++|+.|++++|+++
T Consensus 280 s~N~l~~~-~~-~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 280 SSNRLNRA-PQ-PDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp CSCCCCSC-CC-TTSCCCCSCEECSSTTTS
T ss_pred CCCcCCCC-ch-hhhCCCccEEECcCCCCC
Confidence 55555532 22 345555555556555554
No 341
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.88 E-value=1.9e-22 Score=211.92 Aligned_cols=177 Identities=17% Similarity=0.103 Sum_probs=104.5
Q ss_pred CCcEEeCCCCcccCccCccccCCCCCcEEEecCCc-ccCCCC-CcCCCCCCCEEeccC-cccCCccccccccccccceEE
Q 002063 98 SLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNA-MVGSVP-DLSALKNLEIFDLSI-NYFTGRFPRWVVNLTQLVSLS 174 (973)
Q Consensus 98 ~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~-l~~~~~-~l~~l~~L~~L~Ls~-n~l~~~~~~~~~~l~~L~~L~ 174 (973)
+|++|+|++|++++..+..|+.+++|++|+|++|+ +.+.++ .|.++++|++|++++ |.+++..+..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 78888888888886666678888888888888886 776665 477788888888887 777765555666666666666
Q ss_pred ccCCcCCCCCCcccccCCCCCC---EEEcccc-cCCCCCChhhhccCCCC-eeeccccccccccchhhhccccccEEEee
Q 002063 175 IGDNVYDEAEIPESIGNLKNLT---YLFLAHC-NLRGRIPESISELRELG-TLDICRNKISGEFPRSIRKLQKLWKIELY 249 (973)
Q Consensus 175 l~~n~l~~~~ip~~~~~l~~L~---~L~L~~n-~l~~~~p~~l~~l~~L~-~L~L~~n~l~~~~p~~l~~l~~L~~L~L~ 249 (973)
+++|.++. +|. ++.+++|+ +|++++| ++++..+..|..+++|+ +|++++|+++ .+|......++|++|+|+
T Consensus 112 l~~n~l~~--lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~ 187 (239)
T 2xwt_C 112 IFNTGLKM--FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLN 187 (239)
T ss_dssp EEEECCCS--CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECT
T ss_pred CCCCCCcc--ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcC
Confidence 66665542 343 55555555 5555555 55544444455555555 5555555554 333222222444444444
Q ss_pred ccc-CCCCCCcccccc-ccccEEEeeccccc
Q 002063 250 ANN-LTGELPAELGNL-TLLQEFDISSNQMY 278 (973)
Q Consensus 250 ~n~-l~~~~~~~l~~l-~~L~~L~Ls~N~l~ 278 (973)
+|+ +++..+..|.++ ++|++|++++|+++
T Consensus 188 ~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~ 218 (239)
T 2xwt_C 188 KNKYLTVIDKDAFGGVYSGPSLLDVSQTSVT 218 (239)
T ss_dssp TCTTCCEECTTTTTTCSBCCSEEECTTCCCC
T ss_pred CCCCcccCCHHHhhccccCCcEEECCCCccc
Confidence 442 443333334444 44444444444443
No 342
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.88 E-value=1.4e-24 Score=245.85 Aligned_cols=246 Identities=15% Similarity=0.202 Sum_probs=147.7
Q ss_pred ccccccCCCCCcEEeCCCCcccCccC----ccccCCCCCcEEEecCCcccCCCCCcCCCCCCCEEeccCcccCCcccccc
Q 002063 89 ISSSISALQSLTVLSLPFNVLSGKLP----LELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWV 164 (973)
Q Consensus 89 ~~~~l~~l~~L~~L~Ls~n~l~~~~p----~~l~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~ 164 (973)
++..+..+++|++|+|++|.+++..+ ..|..+++|++|+|++|.+.. +++.+|..+
T Consensus 24 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~--------------------l~~~~~~~~ 83 (386)
T 2ca6_A 24 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGR--------------------VKDEIPEAL 83 (386)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTS--------------------CGGGSHHHH
T ss_pred HHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCc--------------------cccchhHHH
Confidence 44555666666666666666655422 335556666666666643321 222222222
Q ss_pred -------ccccccceEEccCCcCCCC---CCcccccCCCCCCEEEcccccCCCCCChhh----hcc---------CCCCe
Q 002063 165 -------VNLTQLVSLSIGDNVYDEA---EIPESIGNLKNLTYLFLAHCNLRGRIPESI----SEL---------RELGT 221 (973)
Q Consensus 165 -------~~l~~L~~L~l~~n~l~~~---~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l----~~l---------~~L~~ 221 (973)
..+++|++|+|++|.++.. .+|..+..+++|++|+|++|.+++..+..+ ..+ ++|++
T Consensus 84 ~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~ 163 (386)
T 2ca6_A 84 RLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRS 163 (386)
T ss_dssp HHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCE
T ss_pred HHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcE
Confidence 3444444444444444321 134455556666666666666653333222 223 66777
Q ss_pred eeccccccc-cccc---hhhhccccccEEEeecccCCC-----CCCccccccccccEEEeeccccc----cccCCccCCC
Q 002063 222 LDICRNKIS-GEFP---RSIRKLQKLWKIELYANNLTG-----ELPAELGNLTLLQEFDISSNQMY----GKLPEEIGNL 288 (973)
Q Consensus 222 L~L~~n~l~-~~~p---~~l~~l~~L~~L~L~~n~l~~-----~~~~~l~~l~~L~~L~Ls~N~l~----~~~p~~~~~l 288 (973)
|+|++|+++ +.++ ..+..+++|++|+|++|+++. ..+..+..+++|++|+|++|.++ +.+|..+..+
T Consensus 164 L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~ 243 (386)
T 2ca6_A 164 IICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSW 243 (386)
T ss_dssp EECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGC
T ss_pred EECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccC
Confidence 777777665 2333 355566677777777777662 23335667777777777777774 4566677777
Q ss_pred CCccEEEcccCCCCCC----CCCCc--CCccccceeeccccccCC----CCCccc-cccccccccccccccccccCC
Q 002063 289 KNLTVFQCFKNNFSGE----FPSGF--GDMRKLFAFSIYGNRFSG----PFPENL-GRYTALTDVDISENQFSGSFP 354 (973)
Q Consensus 289 ~~L~~L~l~~N~l~~~----~p~~~--~~l~~L~~L~l~~N~l~~----~~~~~l-~~l~~L~~L~Ls~N~l~~~~p 354 (973)
++|+.|++++|.+++. ++..+ +.+++|+.|+|++|.+++ .+|..+ .++++|+.|+|++|++++..|
T Consensus 244 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 244 PNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp TTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred CCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 7777777777777654 34444 337778888888888876 366666 557888888888888886654
No 343
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.87 E-value=3.4e-22 Score=209.97 Aligned_cols=196 Identities=16% Similarity=0.175 Sum_probs=98.0
Q ss_pred cccEEEeeccccccccCCccCCCCCccEEEcccCC-CCCCCCCCcCCccccceeeccc-cccCCCCCccccccccccccc
Q 002063 266 LLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNN-FSGEFPSGFGDMRKLFAFSIYG-NRFSGPFPENLGRYTALTDVD 343 (973)
Q Consensus 266 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~-l~~~~p~~~~~l~~L~~L~l~~-N~l~~~~~~~l~~l~~L~~L~ 343 (973)
+|++|++++|++++..+..+.++++|+.|++++|+ ++...+..|..+++|++|++++ |++++..+..|..+++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 45555555555544333344445555555555554 4433333444555555555554 455444444455555555555
Q ss_pred cccccccccCChhhhhhhhHHHHHhhhccCCCCCCCcccCccccc---eEecccc-cccccCCccccCCCCcc-eEeccC
Q 002063 344 ISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQ---RLRISDN-HLSGKIPDGLWALPNVG-MLDFGD 418 (973)
Q Consensus 344 Ls~N~l~~~~p~~~~~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~---~L~Ls~N-~l~~~~p~~~~~l~~L~-~L~L~~ 418 (973)
+++|++++ + |. +..+++|+ +|++++| .+++..+..|.++++|+ .|++++
T Consensus 112 l~~n~l~~-l------------------------p~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~ 165 (239)
T 2xwt_C 112 IFNTGLKM-F------------------------PD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYN 165 (239)
T ss_dssp EEEECCCS-C------------------------CC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCS
T ss_pred CCCCCCcc-c------------------------cc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCC
Confidence 55555542 1 21 33334444 6666666 66555555555555555 555555
Q ss_pred CcCCCCCCCccCCCCCCCEEEcccCC-CCCCCChhhhcC-CCCCEEecCCCcCCCCccccccccccCCEEEccCc
Q 002063 419 NDFTGGISPLIGLSTSLSQLVLQNNR-FSGELPSELGRL-TNLERLILTNNNFSGKIPSALGALRQLSSLHLEEN 491 (973)
Q Consensus 419 N~l~~~~~~~~~~~~~L~~L~L~~N~-l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 491 (973)
|+++.++...|.. ++|+.|+|++|+ +++..+..|..+ ++|+.|++++|++++..+. .+++|+.|+++++
T Consensus 166 n~l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 166 NGFTSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp CCCCEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred CCCcccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 5555444434433 455555555553 554444555555 5555555555555532222 3445555555544
No 344
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.87 E-value=2.5e-24 Score=243.72 Aligned_cols=240 Identities=16% Similarity=0.165 Sum_probs=181.0
Q ss_pred cCCCCCCCEEeccCcccCCccc----cccccccccceEEccCCcCCC--CCCcccc-------cCCCCCCEEEcccccCC
Q 002063 140 LSALKNLEIFDLSINYFTGRFP----RWVVNLTQLVSLSIGDNVYDE--AEIPESI-------GNLKNLTYLFLAHCNLR 206 (973)
Q Consensus 140 l~~l~~L~~L~Ls~n~l~~~~~----~~~~~l~~L~~L~l~~n~l~~--~~ip~~~-------~~l~~L~~L~L~~n~l~ 206 (973)
+..+++|++|+|++|.+++..+ ..+..+++|++|+|++|.+.. ..+|..+ ..+++|++|+|++|.++
T Consensus 28 l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~ 107 (386)
T 2ca6_A 28 LLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFG 107 (386)
T ss_dssp HHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCC
T ss_pred HhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCC
Confidence 4444555555555555554422 234456666666666654332 1345554 78999999999999999
Q ss_pred C----CCChhhhccCCCCeeeccccccccccchhhh----cc---------ccccEEEeecccCC-CCCC---ccccccc
Q 002063 207 G----RIPESISELRELGTLDICRNKISGEFPRSIR----KL---------QKLWKIELYANNLT-GELP---AELGNLT 265 (973)
Q Consensus 207 ~----~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~----~l---------~~L~~L~L~~n~l~-~~~~---~~l~~l~ 265 (973)
+ .+|..+..+++|++|+|++|.+++..+..+. .+ ++|++|+|++|+++ +.++ ..+..++
T Consensus 108 ~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~ 187 (386)
T 2ca6_A 108 PTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHR 187 (386)
T ss_dssp TTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCC
Confidence 7 4777899999999999999999765554444 44 89999999999998 3444 4677889
Q ss_pred cccEEEeecccccc-----ccCCccCCCCCccEEEcccCCCC----CCCCCCcCCccccceeeccccccCCC----CCcc
Q 002063 266 LLQEFDISSNQMYG-----KLPEEIGNLKNLTVFQCFKNNFS----GEFPSGFGDMRKLFAFSIYGNRFSGP----FPEN 332 (973)
Q Consensus 266 ~L~~L~Ls~N~l~~-----~~p~~~~~l~~L~~L~l~~N~l~----~~~p~~~~~l~~L~~L~l~~N~l~~~----~~~~ 332 (973)
+|++|+|++|+++. ..|..+..+++|+.|++++|.++ +.+|..+..+++|+.|+|++|.+++. ++..
T Consensus 188 ~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~ 267 (386)
T 2ca6_A 188 LLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDA 267 (386)
T ss_dssp TCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHH
T ss_pred CcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHH
Confidence 99999999999973 35558889999999999999996 56778889999999999999999865 4566
Q ss_pred cc--cccccccccccccccccc----CChhhhhhhhHHHHHhhhccCCCCCCCcccCccccceEecccccccccCC
Q 002063 333 LG--RYTALTDVDISENQFSGS----FPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIP 402 (973)
Q Consensus 333 l~--~l~~L~~L~Ls~N~l~~~----~p~~~~~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 402 (973)
+. .+++|+.|+|++|.+++. +|..+ +.++++|++|+|++|++++..+
T Consensus 268 l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l-----------------------~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 268 FSKLENIGLQTLRLQYNEIELDAVRTLKTVI-----------------------DEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp HHTCSSCCCCEEECCSSCCBHHHHHHHHHHH-----------------------HHHCTTCCEEECTTSBSCTTSH
T ss_pred HhhccCCCeEEEECcCCcCCHHHHHHHHHHH-----------------------HhcCCCceEEEccCCcCCcchh
Confidence 63 389999999999999852 33322 1346889999999999986653
No 345
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.87 E-value=5e-23 Score=240.85 Aligned_cols=220 Identities=22% Similarity=0.319 Sum_probs=138.6
Q ss_pred CCcccccCCCCCCCCCC-----Cccee-eeCCCCCceEEEeecCCCCCccccccccCCCCCcEEeCCCCcccCccCcccc
Q 002063 45 DPHGVLDSWKESADSPC-----GFSGI-TCDSVTGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELS 118 (973)
Q Consensus 45 d~~~~l~~W~~~~~~~c-----~w~gv-~C~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~ 118 (973)
+....+.+|..+. .+| .|.|+ .|.. .+++.|+|+++++++ +|..+. ++|++|+|++|+|+ .+| .
T Consensus 28 ~~~~~l~~W~~~~-~~~~~~~~~~~~l~~C~~--~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~ 97 (571)
T 3cvr_A 28 DYFSAWDKWEKQA-LPGENRNEAVSLLKECLI--NQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---E 97 (571)
T ss_dssp HHHHHHHHHHTTC-CTTCCHHHHHHHHHHHHH--TTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---C
T ss_pred hHHHHHHHHhccC-Cccccccchhhhcccccc--CCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---c
Confidence 3334567886554 457 79999 7863 478999999999987 777663 78999999999988 677 4
Q ss_pred CCCCCcEEEecCCcccCCCCCcCCCCCCCEEeccCcccCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEE
Q 002063 119 NCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYL 198 (973)
Q Consensus 119 ~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L 198 (973)
.+++|++|+|++|++++.+. +.+ +|++|+|++|.+++ +|. .+++|+.|++++|.++. +|. .+++|++|
T Consensus 98 ~l~~L~~L~Ls~N~l~~ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~--lp~---~l~~L~~L 165 (571)
T 3cvr_A 98 LPASLEYLDACDNRLSTLPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM--LPE---LPTSLEVL 165 (571)
T ss_dssp CCTTCCEEECCSSCCSCCCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC--CCC---CCTTCCEE
T ss_pred ccCCCCEEEccCCCCCCcch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc--CCC---cCCCcCEE
Confidence 57888888888888888655 655 88888888888875 444 46666666666666653 444 45566666
Q ss_pred EcccccCCCCCChhhhccCCCCeeeccccccccccchhhhccccccEEEeecccCCCCCCccccccccccEEEeeccccc
Q 002063 199 FLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMY 278 (973)
Q Consensus 199 ~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~ 278 (973)
+|++|++++ +|. +. ++|++|+|++|+|+ .+|. +.. +| +...+.|+.|+|++|+|+
T Consensus 166 ~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L-----------------~~~~~~L~~L~Ls~N~l~ 220 (571)
T 3cvr_A 166 SVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RN-----------------HHSEETEIFFRCRENRIT 220 (571)
T ss_dssp ECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC---------------------------CCEEEECCSSCCC
T ss_pred ECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hh-----------------hcccccceEEecCCCcce
Confidence 666666664 444 44 56666666666665 4443 332 33 000011255555555555
Q ss_pred cccCCccCCCCCccEEEcccCCCCCCCCCCcCCc
Q 002063 279 GKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDM 312 (973)
Q Consensus 279 ~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l 312 (973)
.+|..+..+++|+.|++++|.+++.+|..++.+
T Consensus 221 -~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l 253 (571)
T 3cvr_A 221 -HIPENILSLDPTCTIILEDNPLSSRIRESLSQQ 253 (571)
T ss_dssp -CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHH
T ss_pred -ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHh
Confidence 355555555555555555555555555444433
No 346
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.87 E-value=7.5e-22 Score=215.45 Aligned_cols=194 Identities=21% Similarity=0.291 Sum_probs=104.7
Q ss_pred ccCCCCCcEEeCCCCcccCccCccccCCCCCcEEEecCCcccCCCCCcCCCCCCCEEeccCcccCCccccccccccccce
Q 002063 93 ISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVS 172 (973)
Q Consensus 93 l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 172 (973)
...+++|++|++++|.++. +| .+..+++|++|+|++|.+.+.++ +..+++|++|+|++|.+++. ..+..+++|++
T Consensus 37 ~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~-~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~ 111 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP-LKNLTKITELELSGNPLKNV--SAIAGLQSIKT 111 (308)
T ss_dssp HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG-GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCE
T ss_pred HHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh-HccCCCCCEEEccCCcCCCc--hhhcCCCCCCE
Confidence 3456667777777776653 34 46666666777766666666555 66666666666666666542 24555555555
Q ss_pred EEccCCcCCCCCCcccccCCCCCCEEEcccccCCCCCChhhhccCCCCeeeccccccccccchhhhccccccEEEeeccc
Q 002063 173 LSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANN 252 (973)
Q Consensus 173 L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~ 252 (973)
|++++|.++. ++ .+..+++|++|++++|++++..+ +..+++|++|+|++|++++. +. +..+++|++|++++|+
T Consensus 112 L~l~~n~l~~--~~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~ 184 (308)
T 1h6u_A 112 LDLTSTQITD--VT-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDL-TP-LANLSKLTTLKADDNK 184 (308)
T ss_dssp EECTTSCCCC--CG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSC
T ss_pred EECCCCCCCC--ch-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCC-hh-hcCCCCCCEEECCCCc
Confidence 5555555542 22 25555555555555555553322 55555555555555555532 22 4555555555555555
Q ss_pred CCCCCCccccccccccEEEeeccccccccCCccCCCCCccEEEcccCCCC
Q 002063 253 LTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFS 302 (973)
Q Consensus 253 l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 302 (973)
+++..+ +..+++|++|+|++|++++.. .+..+++|+.|++++|.++
T Consensus 185 l~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~ 230 (308)
T 1h6u_A 185 ISDISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTIT 230 (308)
T ss_dssp CCCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEE
T ss_pred cCcChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeee
Confidence 553222 444555555555555554322 1444444444444444444
No 347
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.86 E-value=1.3e-21 Score=213.50 Aligned_cols=211 Identities=19% Similarity=0.283 Sum_probs=168.1
Q ss_pred CcEEeCCCCcccCccCccccCCCCCcEEEecCCcccCCCCCcCCCCCCCEEeccCcccCCccccccccccccceEEccCC
Q 002063 99 LTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDN 178 (973)
Q Consensus 99 L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n 178 (973)
+..+.+..+.+++.+ .+..+++|++|++++|.+... +.+..+++|++|+|++|.+++..+ +..+++|++|++++|
T Consensus 21 ~~~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~l-~~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n 95 (308)
T 1h6u_A 21 AIKIAAGKSNVTDTV--TQADLDGITTLSAFGTGVTTI-EGVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGN 95 (308)
T ss_dssp HHHHHTTCSSTTSEE--CHHHHHTCCEEECTTSCCCCC-TTGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSC
T ss_pred HHHHHhCCCCcCcee--cHHHcCCcCEEEeeCCCccCc-hhhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCC
Confidence 344456666666543 356789999999999999875 478999999999999999986554 889999999999999
Q ss_pred cCCCCCCcccccCCCCCCEEEcccccCCCCCChhhhccCCCCeeeccccccccccchhhhccccccEEEeecccCCCCCC
Q 002063 179 VYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELP 258 (973)
Q Consensus 179 ~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~ 258 (973)
.++. + +.+..+++|++|++++|++++. + .+..+++|++|++++|++++..+ ++.+++|++|+|++|.+++. +
T Consensus 96 ~l~~--~-~~~~~l~~L~~L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~-~ 167 (308)
T 1h6u_A 96 PLKN--V-SAIAGLQSIKTLDLTSTQITDV-T-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDL-T 167 (308)
T ss_dssp CCSC--C-GGGTTCTTCCEEECTTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC-G
T ss_pred cCCC--c-hhhcCCCCCCEEECCCCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCC-h
Confidence 8864 3 3688899999999999999853 3 38889999999999999885433 88888899999999988854 3
Q ss_pred ccccccccccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCccccceeeccccccCC
Q 002063 259 AELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSG 327 (973)
Q Consensus 259 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 327 (973)
. +..+++|+.|++++|++++..+ +..+++|+.|++++|++++..+ +..+++|+.|++++|++++
T Consensus 168 ~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 168 P-LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp G-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred h-hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 3 7888888888888888875433 7788888888888888886543 7777888888888888764
No 348
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.84 E-value=1.5e-20 Score=209.42 Aligned_cols=217 Identities=16% Similarity=0.055 Sum_probs=116.1
Q ss_pred cEEeCCCCcccCccCccccCCCCCcEEEecCCcccCCCCC-cCCCCCCCEEeccCcccCCccccccccccccceEEccCC
Q 002063 100 TVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPD-LSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDN 178 (973)
Q Consensus 100 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n 178 (973)
++++-++++++ .+|..+ .+++++|+|++|+|+..++. |+++++|++|+|++|++.+.+|.
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~---------------- 72 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEA---------------- 72 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECT----------------
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccCh----------------
Confidence 44555555555 455544 24556666666666555542 55555666666665555433321
Q ss_pred cCCCCCCcccccCCCCCCE-EEcccccCCCCCChhhhccCCCCeeeccccccccccchhhhccccccEEEeec-ccCCCC
Q 002063 179 VYDEAEIPESIGNLKNLTY-LFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYA-NNLTGE 256 (973)
Q Consensus 179 ~l~~~~ip~~~~~l~~L~~-L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~-n~l~~~ 256 (973)
..|.++++|++ +.+++|+++...|..|..+++|++|++++|+|+...+..+....++..|++.+ |++...
T Consensus 73 --------~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l 144 (350)
T 4ay9_X 73 --------DVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTI 144 (350)
T ss_dssp --------TSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEE
T ss_pred --------hHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccc
Confidence 23444554443 34445555555555556666666666666666544444444555555565543 345433
Q ss_pred CCccccccc-cccEEEeeccccccccCCccCCCCCccEEEccc-CCCCCCCCCCcCCccccceeeccccccCCCCCcccc
Q 002063 257 LPAELGNLT-LLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFK-NNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLG 334 (973)
Q Consensus 257 ~~~~l~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~-N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~ 334 (973)
.+..|..+. .++.|+|++|+++ .+|.......+|+.+++++ |.++...+..|..+++|+.|++++|+|+...+..+.
T Consensus 145 ~~~~f~~~~~~l~~L~L~~N~i~-~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~ 223 (350)
T 4ay9_X 145 ERNSFVGLSFESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLE 223 (350)
T ss_dssp CTTSSTTSBSSCEEEECCSSCCC-EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCT
T ss_pred cccchhhcchhhhhhcccccccc-CCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhc
Confidence 334444443 4666666666666 4444444455666666654 334433334566666666666666666654444555
Q ss_pred cccccccccc
Q 002063 335 RYTALTDVDI 344 (973)
Q Consensus 335 ~l~~L~~L~L 344 (973)
++++|+.+++
T Consensus 224 ~L~~L~~l~~ 233 (350)
T 4ay9_X 224 NLKKLRARST 233 (350)
T ss_dssp TCCEEECTTC
T ss_pred cchHhhhccC
Confidence 5555554443
No 349
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.84 E-value=1.1e-21 Score=210.30 Aligned_cols=142 Identities=17% Similarity=0.161 Sum_probs=115.5
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccc--------------------cHHHHHHHHHHHHhcCCCceeeE
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD--------------------GVKVFAAEMEILGKIRHRNILKL 736 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~--------------------~~~~~~~E~~~l~~l~hpniv~l 736 (973)
.|.+.+.||+|+||.||+|++ .+|+.||||++.... ....+.+|++++++++ | +++
T Consensus 91 ~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v 166 (282)
T 1zar_A 91 VDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAV 166 (282)
T ss_dssp CSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSS
T ss_pred EEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCc
Confidence 456779999999999999999 779999999985421 2456889999999999 4 566
Q ss_pred eEEEEeCCeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCC
Q 002063 737 YACLLKGGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDY 816 (973)
Q Consensus 737 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~ 816 (973)
.+++.. +..|+||||+++|+|.+ +.. .....++.|++.||+||| +.+|+||||||+||+++ ++
T Consensus 167 ~~~~~~-~~~~lvmE~~~g~~L~~-l~~-----------~~~~~i~~qi~~~l~~lH---~~giiHrDlkp~NILl~-~~ 229 (282)
T 1zar_A 167 PKVYAW-EGNAVLMELIDAKELYR-VRV-----------ENPDEVLDMILEEVAKFY---HRGIVHGDLSQYNVLVS-EE 229 (282)
T ss_dssp CCEEEE-ETTEEEEECCCCEEGGG-CCC-----------SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEE-TT
T ss_pred CeEEec-cceEEEEEecCCCcHHH-cch-----------hhHHHHHHHHHHHHHHHH---HCCCEeCCCCHHHEEEE-CC
Confidence 665543 45699999999999987 321 123468999999999999 78999999999999999 99
Q ss_pred ceEEecccCCccccCCCCcccccccCcccccccccccc
Q 002063 817 EPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAY 854 (973)
Q Consensus 817 ~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 854 (973)
.+||+|||+++. +..|+|||++.
T Consensus 230 ~vkl~DFG~a~~---------------~~~~~a~e~l~ 252 (282)
T 1zar_A 230 GIWIIDFPQSVE---------------VGEEGWREILE 252 (282)
T ss_dssp EEEECCCTTCEE---------------TTSTTHHHHHH
T ss_pred cEEEEECCCCeE---------------CCCCCHHHHHH
Confidence 999999999863 34578899874
No 350
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.84 E-value=3e-20 Score=206.86 Aligned_cols=102 Identities=18% Similarity=0.173 Sum_probs=56.1
Q ss_pred ccceEecccccccccCCccccCCCCcceEeccC-CcCCCCCCCccCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEec
Q 002063 386 TIQRLRISDNHLSGKIPDGLWALPNVGMLDFGD-NDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLIL 464 (973)
Q Consensus 386 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 464 (973)
.++.|+|++|+|+. +|...+...+|+.|++++ |.++.++...|..+++|++|+|++|+|+...+.. +.+|+.|.+
T Consensus 155 ~l~~L~L~~N~i~~-i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~---~~~L~~L~~ 230 (350)
T 4ay9_X 155 ESVILWLNKNGIQE-IHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYG---LENLKKLRA 230 (350)
T ss_dssp SCEEEECCSSCCCE-ECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSS---CTTCCEEEC
T ss_pred hhhhhccccccccC-CChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhh---hccchHhhh
Confidence 35556666666653 333333445566666653 4555555555666667777777777776333322 334444444
Q ss_pred CCCcCCCCccccccccccCCEEEccCcc
Q 002063 465 TNNNFSGKIPSALGALRQLSSLHLEENA 492 (973)
Q Consensus 465 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 492 (973)
.++.--..+| .+.++++|+.++++++.
T Consensus 231 l~~~~l~~lP-~l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 231 RSTYNLKKLP-TLEKLVALMEASLTYPS 257 (350)
T ss_dssp TTCTTCCCCC-CTTTCCSCCEEECSCHH
T ss_pred ccCCCcCcCC-CchhCcChhhCcCCCCc
Confidence 3333222555 36677777777776653
No 351
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.83 E-value=2.5e-20 Score=191.10 Aligned_cols=179 Identities=22% Similarity=0.240 Sum_probs=144.0
Q ss_pred ceEecccccccccCCccccCCCCcceEeccCCcCCCCCCCccCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEecCCC
Q 002063 388 QRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNN 467 (973)
Q Consensus 388 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 467 (973)
+.++.+++.++ .+|..+ .++|++|++++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|
T Consensus 10 ~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 56777788777 455444 457888888888888877777888888888888888888766667788888888888888
Q ss_pred cCCCCccccccccccCCEEEccCcccccCCCccccCccccchhhccccccccCCCccccccCCCCeeecCCCccCCCCCc
Q 002063 468 NFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPD 547 (973)
Q Consensus 468 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 547 (973)
++++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|.+.+..|
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~- 165 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP- 165 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTT-
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecCCC-
Confidence 8887777778888889999998888887777778888889999999998887777778888899999999998886554
Q ss_pred hhhcccCceEEccCCccccccCcccccC
Q 002063 548 NLMKLKLSSIDLSENQLSGSVPLDFLRM 575 (973)
Q Consensus 548 ~~~~l~L~~l~ls~N~l~~~~p~~~~~~ 575 (973)
.+++|+++.|+++|.+|..+...
T Consensus 166 -----~l~~L~~~~n~~~g~ip~~~~~l 188 (208)
T 2o6s_A 166 -----GIRYLSEWINKHSGVVRNSAGSV 188 (208)
T ss_dssp -----TTHHHHHHHHHCTTTBBCTTSSB
T ss_pred -----CHHHHHHHHHhCCceeeccCccc
Confidence 36788888899999988765433
No 352
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.83 E-value=1.4e-21 Score=237.52 Aligned_cols=233 Identities=15% Similarity=0.169 Sum_probs=125.2
Q ss_pred chHHHHHHHHHHHhcCCC-cccccCCCCCCCCCCCcceeeeCCCCCceEEEeecCCCCCccccccccCCCCCcEEe----
Q 002063 29 LNVETQALIQFKSKLKDP-HGVLDSWKESADSPCGFSGITCDSVTGRVTEISFDNKSLSGEISSSISALQSLTVLS---- 103 (973)
Q Consensus 29 ~~~~~~aLl~~k~~~~d~-~~~l~~W~~~~~~~c~w~gv~C~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~---- 103 (973)
...++++|+++......+ ...-..|.......+.|.++.++. ++|+.++|.++++.. ++..+.....|+.+.
T Consensus 130 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~~~l~L~~n~~~~-~~~~~l~~l~Ls~~~i~~~ 206 (727)
T 4b8c_D 130 VDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVST--PLTPKIELFANGKDE-ANQALLQHKKLSQYSIDED 206 (727)
T ss_dssp --CCCHHHHHHHHHHHHHHTTC----------------------------------------------------------
T ss_pred cccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecC--CccceEEeeCCCCCc-chhhHhhcCccCcccccCc
Confidence 356899999999887422 333456765555568899999874 689999999999886 344433333333322
Q ss_pred -CCCCcccCccCccccCCCCCcEEEecCCcccCCCCCcCCCCCCCEEeccCcccCCccccccccccccceEEccCCcCCC
Q 002063 104 -LPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDE 182 (973)
Q Consensus 104 -Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 182 (973)
++.|.+. ..|..+..+++|+.|+|++|.+...++.+..+++|++|+|++|.|+ .+|..|.+|++|++|+|++|.++
T Consensus 207 ~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~- 283 (727)
T 4b8c_D 207 DDIENRMV-MPKDSKYDDQLWHALDLSNLQIFNISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT- 283 (727)
T ss_dssp ----------------CCCCCCEEECTTSCCSCCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-
T ss_pred ccccccee-cChhhhccCCCCcEEECCCCCCCCCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-
Confidence 3333343 4577788888888888888888877777778888888888888888 77888888888888888888887
Q ss_pred CCCcccccCCCCCCEEEcccccCCCCCChhhhccCCCCeeeccccccccccchhhhcccc-ccEEEeecccCCCCCCccc
Q 002063 183 AEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQK-LWKIELYANNLTGELPAEL 261 (973)
Q Consensus 183 ~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~-L~~L~L~~n~l~~~~~~~l 261 (973)
.+|..+++|++|++|+|++|.|+ .+|..|+.+++|++|+|++|+|++.+|..+..+.. +..|+|++|.+++.+|..
T Consensus 284 -~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~- 360 (727)
T 4b8c_D 284 -SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE- 360 (727)
T ss_dssp -SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-
T ss_pred -ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc-
Confidence 57888888888888888888887 67777888888888888888888888877766532 234677888888776653
Q ss_pred cccccccEEEeecc
Q 002063 262 GNLTLLQEFDISSN 275 (973)
Q Consensus 262 ~~l~~L~~L~Ls~N 275 (973)
|+.|+++.|
T Consensus 361 -----l~~l~l~~n 369 (727)
T 4b8c_D 361 -----RRFIEINTD 369 (727)
T ss_dssp --------------
T ss_pred -----cceeEeecc
Confidence 455666666
No 353
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.83 E-value=2.4e-20 Score=191.28 Aligned_cols=162 Identities=20% Similarity=0.185 Sum_probs=149.2
Q ss_pred cccceEecccccccccCCccccCCCCcceEeccCCcCCCCCCCccCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEec
Q 002063 385 KTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLIL 464 (973)
Q Consensus 385 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 464 (973)
++|++|+|++|++++..+..|..+++|++|++++|++++.++..|..+++|++|+|++|++++..+..+..+++|++|+|
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 107 (208)
T 2o6s_A 28 AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELAL 107 (208)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEc
Confidence 58999999999999888888899999999999999999988888999999999999999999777777899999999999
Q ss_pred CCCcCCCCccccccccccCCEEEccCcccccCCCccccCccccchhhccccccccCCCccccccCCCCeeecCCCccCCC
Q 002063 465 TNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGS 544 (973)
Q Consensus 465 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 544 (973)
++|++++..+..|..+++|++|+|++|++++..+..+..+++|+.|++++|.+.+ .+++|++|+++.|+++|.
T Consensus 108 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ 180 (208)
T 2o6s_A 108 NTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGV 180 (208)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTT
T ss_pred CCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCce
Confidence 9999998888889999999999999999998888789999999999999998874 466899999999999999
Q ss_pred CCchhhccc
Q 002063 545 IPDNLMKLK 553 (973)
Q Consensus 545 ~p~~~~~l~ 553 (973)
+|..+..++
T Consensus 181 ip~~~~~l~ 189 (208)
T 2o6s_A 181 VRNSAGSVA 189 (208)
T ss_dssp BBCTTSSBC
T ss_pred eeccCcccc
Confidence 999887654
No 354
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.82 E-value=1.2e-20 Score=195.02 Aligned_cols=158 Identities=22% Similarity=0.275 Sum_probs=112.7
Q ss_pred CCCEEEcccCCCCCCCC-hhhhcCCCCCEEecCCCcCCCCccccccccccCCEEEccCcccccCCCccccCccccchhhc
Q 002063 434 SLSQLVLQNNRFSGELP-SELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNL 512 (973)
Q Consensus 434 ~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 512 (973)
.+++|+|++|+|++..| ..|..+++|+.|+|++|+|++..+..|.++++|++|+|++|+|++..+..|.++++|+.|+|
T Consensus 33 ~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 112 (220)
T 2v70_A 33 YTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLML 112 (220)
T ss_dssp TCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEEC
T ss_pred CCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEEC
Confidence 45667777777765533 34677777777777777777666667777777777777777777766677777777888888
Q ss_pred cccccccCCCccccccCCCCeeecCCCccCCCCCchhhccc-CceEEccCCccccccCcccc-c-CCCCccccCCCCCcc
Q 002063 513 ARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLK-LSSIDLSENQLSGSVPLDFL-R-MGGDGAFAGNEGLCL 589 (973)
Q Consensus 513 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-L~~l~ls~N~l~~~~p~~~~-~-~~~~~~~~~n~~lc~ 589 (973)
++|+|++..|..|..+++|+.|+|++|+|++..|..+..++ |+.|+|++|+|+|.|+..|. . +.....+.+++ .|+
T Consensus 113 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~l~~~~~~~~~~~~~~-~C~ 191 (220)
T 2v70_A 113 RSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLRKKRIVTGNP-RCQ 191 (220)
T ss_dssp TTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGGGHHHHHHHHHSCCBCCCC-EEE
T ss_pred CCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCchHHHHHHHHhcCccccCC-ccC
Confidence 88888777777788888888888888888877787777775 88888888888888886432 1 11111234443 677
Q ss_pred Ccc
Q 002063 590 DQS 592 (973)
Q Consensus 590 ~~~ 592 (973)
.|.
T Consensus 192 ~P~ 194 (220)
T 2v70_A 192 KPY 194 (220)
T ss_dssp ESG
T ss_pred CCh
Confidence 665
No 355
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.82 E-value=2.3e-20 Score=218.32 Aligned_cols=189 Identities=22% Similarity=0.308 Sum_probs=122.8
Q ss_pred CCcEEEecCCcccCCCCCcCCCCCCCEEeccCcccCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEcc
Q 002063 122 NLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLA 201 (973)
Q Consensus 122 ~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~ 201 (973)
+|++|+|++|.+++.++.+. ++|++|+|++|.|+ .+| ..+++|++|++++|.++. +|. +.+ +|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~--ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSSLPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST--LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSCCCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC--CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCccCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC--cch-hhc--CCCEEECC
Confidence 34444444444444333221 34444444444444 233 224445555555554442 444 433 66777777
Q ss_pred cccCCCCCChhhhccCCCCeeeccccccccccchhhhccccccEEEeecccCCCCCCccccccccccEEEeecccccccc
Q 002063 202 HCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKL 281 (973)
Q Consensus 202 ~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~ 281 (973)
+|++++ +|. .+++|++|+|++|+|++ +|. .+++|++|+|++|+|++ +|. |. ++|+.|+|++|+|+ .+
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~l 195 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SL 195 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SC
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-ch
Confidence 777765 444 46677777777777764 554 45677777788777775 555 55 78888888888887 66
Q ss_pred CCccCCCCCc-------cEEEcccCCCCCCCCCCcCCccccceeeccccccCCCCCcccccccc
Q 002063 282 PEEIGNLKNL-------TVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTA 338 (973)
Q Consensus 282 p~~~~~l~~L-------~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~ 338 (973)
|. +.. +| +.|++++|+|+ .+|..+..+++|+.|+|++|++++.+|..+..+..
T Consensus 196 p~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 196 PA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQTA 255 (571)
T ss_dssp CC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHHH
T ss_pred hh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhhc
Confidence 66 554 66 99999999999 57888888999999999999999999988877665
No 356
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.82 E-value=2.5e-20 Score=208.32 Aligned_cols=182 Identities=25% Similarity=0.244 Sum_probs=160.0
Q ss_pred cceEecccccccccCCccccCCCCcceEeccCCcCCCCCCCccC-CCCCCCEEEcccCCCCCCCChhhhcCCCCCEEecC
Q 002063 387 IQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIG-LSTSLSQLVLQNNRFSGELPSELGRLTNLERLILT 465 (973)
Q Consensus 387 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 465 (973)
-+.+++++|.++ .+|..+. +.++.|+|++|++++..+..+. .+++|+.|+|++|+|++..+..|..+++|++|+|+
T Consensus 20 ~~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 96 (361)
T 2xot_A 20 SNILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLS 96 (361)
T ss_dssp TTEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECC
Confidence 468999999998 5676553 4689999999999999888887 89999999999999998888899999999999999
Q ss_pred CCcCCCCccccccccccCCEEEccCcccccCCCccccCccccchhhccccccccCCCccc---cccCCCCeeecCCCccC
Q 002063 466 NNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSL---SLLSSLNALNLSGNKLT 542 (973)
Q Consensus 466 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~---~~l~~L~~L~L~~N~l~ 542 (973)
+|+|++..+..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+..| ..+++|+.|+|++|+|+
T Consensus 97 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~ 176 (361)
T 2xot_A 97 SNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLK 176 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCC
T ss_pred CCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCC
Confidence 999998778889999999999999999999999999999999999999999996555555 67999999999999999
Q ss_pred CCCCchhhccc---CceEEccCCccccccCcc
Q 002063 543 GSIPDNLMKLK---LSSIDLSENQLSGSVPLD 571 (973)
Q Consensus 543 ~~~p~~~~~l~---L~~l~ls~N~l~~~~p~~ 571 (973)
+..+..+..++ ++.|+|++|+|.|.|...
T Consensus 177 ~l~~~~~~~l~~~~l~~l~l~~N~~~C~C~l~ 208 (361)
T 2xot_A 177 KLPLTDLQKLPAWVKNGLYLHNNPLECDCKLY 208 (361)
T ss_dssp CCCHHHHHHSCHHHHTTEECCSSCEECCHHHH
T ss_pred ccCHHHhhhccHhhcceEEecCCCccCCcCcH
Confidence 66656777765 589999999999999753
No 357
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.82 E-value=2.6e-20 Score=192.35 Aligned_cols=140 Identities=24% Similarity=0.301 Sum_probs=108.7
Q ss_pred CCCCEEEcccCCCCCCCChhhhcCCCCCEEecCCCcCCCCccccccccccCCEEEccCcccccCCCccccCccccchhhc
Q 002063 433 TSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNL 512 (973)
Q Consensus 433 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 512 (973)
++|+.|+|++|+|++..+..|..+++|+.|+|++|++++..|..|.++++|++|+|++|+|+...+..|.++++|+.|+|
T Consensus 32 ~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 111 (220)
T 2v9t_B 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLL 111 (220)
T ss_dssp TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEEC
Confidence 45777777777777666667777777777777777777666777777777888888888777666666777888888888
Q ss_pred cccccccCCCccccccCCCCeeecCCCccCCCCCchhhccc-CceEEccCCccccccCccc
Q 002063 513 ARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLK-LSSIDLSENQLSGSVPLDF 572 (973)
Q Consensus 513 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-L~~l~ls~N~l~~~~p~~~ 572 (973)
++|+|++..|..|..+++|+.|+|++|+|++..+..+..++ |+.|+|++|+|.|.|+..|
T Consensus 112 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~l~~ 172 (220)
T 2v9t_B 112 NANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKW 172 (220)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSGGGHH
T ss_pred CCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCCccHH
Confidence 88888877778888888888888888888877776777775 8889999999998888653
No 358
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.80 E-value=7.1e-20 Score=197.91 Aligned_cols=171 Identities=27% Similarity=0.381 Sum_probs=79.9
Q ss_pred cCCCCCcEEeCCCCcccCccCccccCCCCCcEEEecCCcccCCCCCcCCCCCCCEEeccCcccCCccccccccccccceE
Q 002063 94 SALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSL 173 (973)
Q Consensus 94 ~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 173 (973)
..+++|++|++++|.++. ++ .+..+++|++|+|++|++.+.++ +..+++|++|+|++|.+++
T Consensus 43 ~~l~~L~~L~l~~~~i~~-~~-~~~~l~~L~~L~L~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~--------------- 104 (291)
T 1h6t_A 43 NELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP-LANLKNLGWLFLDENKVKD--------------- 104 (291)
T ss_dssp HHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCC---------------
T ss_pred hhcCcccEEEccCCCccc-Ch-hHhcCCCCCEEEccCCccCCCcc-cccCCCCCEEECCCCcCCC---------------
Confidence 345555555555555542 22 24555555555555555554443 4555555555555555443
Q ss_pred EccCCcCCCCCCcccccCCCCCCEEEcccccCCCCCChhhhccCCCCeeeccccccccccchhhhccccccEEEeecccC
Q 002063 174 SIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNL 253 (973)
Q Consensus 174 ~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l 253 (973)
+ +.+..+++|++|++++|++++. ..+..+++|++|++++|++++. ..++.+++|++|++++|++
T Consensus 105 -----------~-~~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l 168 (291)
T 1h6t_A 105 -----------L-SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQI 168 (291)
T ss_dssp -----------G-GGGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCC
T ss_pred -----------C-hhhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCcc
Confidence 1 2244444455555555544432 2344445555555555554432 3344444444444444444
Q ss_pred CCCCCccccccccccEEEeeccccccccCCccCCCCCccEEEcccCCCC
Q 002063 254 TGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFS 302 (973)
Q Consensus 254 ~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 302 (973)
++..+ +..+++|+.|++++|.+++ +| .+..+++|+.|++++|++.
T Consensus 169 ~~~~~--l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~ 213 (291)
T 1h6t_A 169 SDIVP--LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECL 213 (291)
T ss_dssp CCCGG--GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEE
T ss_pred ccchh--hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCccc
Confidence 43222 4444455555555554442 22 2444444444444444444
No 359
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.80 E-value=3.5e-19 Score=185.20 Aligned_cols=158 Identities=23% Similarity=0.250 Sum_probs=126.9
Q ss_pred CCCCCcceeeeCCCCCceEEEeecCCCCCccccccccCCCCCcEEeCCCCcccCccCccccCCCCCcEEEecCCcccCCC
Q 002063 58 DSPCGFSGITCDSVTGRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSV 137 (973)
Q Consensus 58 ~~~c~w~gv~C~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~ 137 (973)
.+.|+|.+|.|+.. +++ .+|..+. ++|++|+|++|.+++..|..|..+++|++|+|++|++...+
T Consensus 16 ~~~Cs~~~v~c~~~------------~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~ 80 (229)
T 3e6j_A 16 QCSCSGTTVDCRSK------------RHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALP 80 (229)
T ss_dssp TCEEETTEEECTTS------------CCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CCEEeCCEeEccCC------------CcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcC
Confidence 45799999999742 222 4454443 88999999999999888999999999999999999998887
Q ss_pred CC-cCCCCCCCEEeccCcccCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccccCCCCCChhhhcc
Q 002063 138 PD-LSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISEL 216 (973)
Q Consensus 138 ~~-l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l 216 (973)
+. |..+++|++|+|++|.+++..+..|..+++|++|+|++|.++ .+|..+..+++|++|+|++|++++..+..+..+
T Consensus 81 ~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~--~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 158 (229)
T 3e6j_A 81 VGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT--ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRL 158 (229)
T ss_dssp TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC--SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTC
T ss_pred hhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc--ccCcccccCCCCCEEECCCCcCCccCHHHHhCC
Confidence 65 789999999999999999777777788888888888888876 567777778888888888888876666667777
Q ss_pred CCCCeeeccccccccc
Q 002063 217 RELGTLDICRNKISGE 232 (973)
Q Consensus 217 ~~L~~L~L~~n~l~~~ 232 (973)
++|++|+|++|.+...
T Consensus 159 ~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 159 SSLTHAYLFGNPWDCE 174 (229)
T ss_dssp TTCCEEECTTSCBCTT
T ss_pred CCCCEEEeeCCCccCC
Confidence 7777777777777644
No 360
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.80 E-value=5.9e-19 Score=183.47 Aligned_cols=136 Identities=25% Similarity=0.308 Sum_probs=98.6
Q ss_pred CCCCEEEcccCCCCCCCChhhhcCCCCCEEecCCCcCCCCccccccccccCCEEEccCcccccCCCccccCccccchhhc
Q 002063 433 TSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNL 512 (973)
Q Consensus 433 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 512 (973)
++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L 119 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFM 119 (229)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEec
Confidence 56667777777777666666777777777777777776555566677777777777777777666666777777777777
Q ss_pred cccccccCCCccccccCCCCeeecCCCccCCCCCchhhccc-CceEEccCCccccccC
Q 002063 513 ARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLK-LSSIDLSENQLSGSVP 569 (973)
Q Consensus 513 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-L~~l~ls~N~l~~~~p 569 (973)
++|+|+ .+|..+..+++|+.|+|++|+|++..+..+..++ |+.|+|++|+|.|.|+
T Consensus 120 s~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 120 CCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred cCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 777777 6677777778888888888888765555666664 7888888888888776
No 361
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.80 E-value=1.2e-19 Score=187.29 Aligned_cols=157 Identities=20% Similarity=0.256 Sum_probs=143.0
Q ss_pred cceEecccccccccCCccccCCCCcceEeccCCcCCCCCC-CccCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEecC
Q 002063 387 IQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGIS-PLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILT 465 (973)
Q Consensus 387 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 465 (973)
-+.+++++|.++ .+|..+. +.++.|+|++|++++..+ ..|..+++|++|+|++|+|++..+..|.++++|++|+|+
T Consensus 13 ~~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 89 (220)
T 2v70_A 13 GTTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLT 89 (220)
T ss_dssp TTEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECC
Confidence 368999999998 5676553 456899999999998854 568899999999999999998888899999999999999
Q ss_pred CCcCCCCccccccccccCCEEEccCcccccCCCccccCccccchhhccccccccCCCccccccCCCCeeecCCCccCCCC
Q 002063 466 NNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSI 545 (973)
Q Consensus 466 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 545 (973)
+|++++..+..|.++++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|++++..
T Consensus 90 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 169 (220)
T 2v70_A 90 SNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNC 169 (220)
T ss_dssp SSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSG
T ss_pred CCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCC
Confidence 99999888889999999999999999999999999999999999999999999988999999999999999999999766
Q ss_pred C
Q 002063 546 P 546 (973)
Q Consensus 546 p 546 (973)
+
T Consensus 170 ~ 170 (220)
T 2v70_A 170 Y 170 (220)
T ss_dssp G
T ss_pred c
Confidence 5
No 362
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.80 E-value=1.1e-19 Score=196.49 Aligned_cols=168 Identities=27% Similarity=0.349 Sum_probs=119.2
Q ss_pred CceEEEeecCCCCCccccccccCCCCCcEEeCCCCcccCccCccccCCCCCcEEEecCCcccCCCCCcCCCCCCCEEecc
Q 002063 73 GRVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLS 152 (973)
Q Consensus 73 ~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls 152 (973)
.+++.|++++++++.. +.+..+++|++|+|++|++++..+ ++.+++|++|+|++|.+.+. +.+..+++|++|+|+
T Consensus 46 ~~L~~L~l~~~~i~~~--~~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~ 120 (291)
T 1h6t_A 46 NSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDL-SSLKDLKKLKSLSLE 120 (291)
T ss_dssp HTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCG-GGGTTCTTCCEEECT
T ss_pred CcccEEEccCCCcccC--hhHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCCC-hhhccCCCCCEEECC
Confidence 4689999999999854 458999999999999999997544 99999999999999999874 459999999999999
Q ss_pred CcccCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccccCCCCCChhhhccCCCCeeeccccccccc
Q 002063 153 INYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGE 232 (973)
Q Consensus 153 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~ 232 (973)
+|.+++. ..+..+++|++|++++|.++.. ..++.+++|++|++++|++++..+ +..+++|++|+|++|+|++
T Consensus 121 ~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~---~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~- 192 (291)
T 1h6t_A 121 HNGISDI--NGLVHLPQLESLYLGNNKITDI---TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD- 192 (291)
T ss_dssp TSCCCCC--GGGGGCTTCCEEECCSSCCCCC---GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-
T ss_pred CCcCCCC--hhhcCCCCCCEEEccCCcCCcc---hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCC-
Confidence 9999853 4566666666666666666532 345556666666666666654333 5555556666665555552
Q ss_pred cchhhhccccccEEEeecccCC
Q 002063 233 FPRSIRKLQKLWKIELYANNLT 254 (973)
Q Consensus 233 ~p~~l~~l~~L~~L~L~~n~l~ 254 (973)
++ .+..+++|+.|++++|.++
T Consensus 193 l~-~l~~l~~L~~L~l~~n~i~ 213 (291)
T 1h6t_A 193 LR-ALAGLKNLDVLELFSQECL 213 (291)
T ss_dssp CG-GGTTCTTCSEEEEEEEEEE
T ss_pred Ch-hhccCCCCCEEECcCCccc
Confidence 22 2444445555555544444
No 363
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.80 E-value=1.3e-19 Score=214.57 Aligned_cols=188 Identities=24% Similarity=0.330 Sum_probs=115.0
Q ss_pred EEEeecCCCCCccccccccCCCCCcEEeCCCCcccCccCccccCCCCCcEEEecCCcccCCCCCcCCCCCCCEEeccCcc
Q 002063 76 TEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINY 155 (973)
Q Consensus 76 ~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~ 155 (973)
..+.+....+++.+ .+..|++|+.|++++|.+.. +| .|..|++|+.|+|++|.+.+.++ +..+++|+.|+|++|.
T Consensus 24 ~~l~l~~~~i~~~~--~~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~ 98 (605)
T 1m9s_A 24 IKDNLKKKSVTDAV--TQNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP-LTNLKNLGWLFLDENK 98 (605)
T ss_dssp HHHHTTCSCTTSEE--CHHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG-GGGCTTCCEEECCSSC
T ss_pred HHHhccCCCccccc--chhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh-hccCCCCCEEECcCCC
Confidence 33444444444332 24566777777777777653 33 46677777777777777766555 6667777777777777
Q ss_pred cCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccccCCCCCChhhhccCCCCeeeccccccccccch
Q 002063 156 FTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPR 235 (973)
Q Consensus 156 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~ 235 (973)
+++ + ..+..+++|++|+|++|.+.. + +.+..+++|+.|+|++|++++. ..+..+++|+.|+|++|+|++..|
T Consensus 99 l~~-l-~~l~~l~~L~~L~Ls~N~l~~--l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~- 170 (605)
T 1m9s_A 99 IKD-L-SSLKDLKKLKSLSLEHNGISD--I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP- 170 (605)
T ss_dssp CCC-C-TTSTTCTTCCEEECTTSCCCC--C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG-
T ss_pred CCC-C-hhhccCCCCCEEEecCCCCCC--C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh-
Confidence 664 2 256666666666666666653 2 3466666666666666666643 456666666666666666664444
Q ss_pred hhhccccccEEEeecccCCCCCCccccccccccEEEeecccccc
Q 002063 236 SIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYG 279 (973)
Q Consensus 236 ~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~ 279 (973)
+..+++|+.|+|++|+|++. ..+..+++|+.|+|++|.+.+
T Consensus 171 -l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 171 -LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp -GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEEC
T ss_pred -hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcC
Confidence 66666666666666666642 245666666666666666653
No 364
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.79 E-value=2.4e-19 Score=212.34 Aligned_cols=204 Identities=22% Similarity=0.276 Sum_probs=162.4
Q ss_pred CCCCcEEeCCCCcccCccCccccCCCCCcEEEecCCcccCCCCCcCCCCCCCEEeccCcccCCccccccccccccceEEc
Q 002063 96 LQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSI 175 (973)
Q Consensus 96 l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l 175 (973)
+..+..+.++.+.+++.++ +..|++|+.|+|++|.+... +.+..+++|+.|+|++|.+++..| +..+++|+.|+|
T Consensus 20 l~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l-~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~L 94 (605)
T 1m9s_A 20 FAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-QGIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFL 94 (605)
T ss_dssp HHHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCCC-TTGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEEC
T ss_pred HHHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCCC-hHHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEEC
Confidence 4556677788888876544 67899999999999999876 468999999999999999997655 889999999999
Q ss_pred cCCcCCCCCCcccccCCCCCCEEEcccccCCCCCChhhhccCCCCeeeccccccccccchhhhccccccEEEeecccCCC
Q 002063 176 GDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTG 255 (973)
Q Consensus 176 ~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~ 255 (973)
++|.+.. + +.+..+++|++|+|++|++++. ..+..+++|+.|+|++|+|++. ..++.+++|+.|+|++|.|++
T Consensus 95 s~N~l~~--l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~ 167 (605)
T 1m9s_A 95 DENKIKD--L-SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISD 167 (605)
T ss_dssp CSSCCCC--C-TTSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCC
T ss_pred cCCCCCC--C-hhhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCC
Confidence 9998864 3 3688899999999999999853 4588889999999999988854 678888888888888888886
Q ss_pred CCCccccccccccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCcccc
Q 002063 256 ELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKL 315 (973)
Q Consensus 256 ~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L 315 (973)
..| +..+++|+.|+|++|++++. ..+..+++|+.|+|++|++.+.....+..+..+
T Consensus 168 ~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p~~~~~~l~~~ 223 (605)
T 1m9s_A 168 IVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKPINHQSNLVVP 223 (605)
T ss_dssp CGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECCCCCCCSSCEEE
T ss_pred chh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCCcccccccEEec
Confidence 655 78888888888888888753 357788888888888888876544444444333
No 365
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.79 E-value=3.1e-19 Score=184.24 Aligned_cols=154 Identities=20% Similarity=0.211 Sum_probs=141.1
Q ss_pred cceEecccccccccCCccccCCCCcceEeccCCcCCCCCCCccCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEecCC
Q 002063 387 IQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTN 466 (973)
Q Consensus 387 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 466 (973)
-+.+++++|.++ .+|..+. ++|+.|+|++|+++++.+..|..+++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 13 ~~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~ 89 (220)
T 2v9t_B 13 NNIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYG 89 (220)
T ss_dssp TTEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCS
T ss_pred CCEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCC
Confidence 367899999998 5666553 6899999999999998888999999999999999999988899999999999999999
Q ss_pred CcCCCCccccccccccCCEEEccCcccccCCCccccCccccchhhccccccccCCCccccccCCCCeeecCCCccCC
Q 002063 467 NNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTG 543 (973)
Q Consensus 467 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 543 (973)
|+|+...+..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++..
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 90 NKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 99997777788999999999999999999999999999999999999999998888889999999999999999985
No 366
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.78 E-value=3.2e-19 Score=199.40 Aligned_cols=177 Identities=24% Similarity=0.193 Sum_probs=155.5
Q ss_pred cccccccccccccCChhhhhhhhHHHHHhhhccCCCCCCCcccCccccceEecccccccccCCcccc-CCCCcceEeccC
Q 002063 340 TDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLW-ALPNVGMLDFGD 418 (973)
Q Consensus 340 ~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~~ 418 (973)
+.+++++|.++ . +|..+. +.++.|+|++|+|++..+..|. .+++|+.|+|++
T Consensus 21 ~~l~c~~~~l~-~------------------------iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~ 73 (361)
T 2xot_A 21 NILSCSKQQLP-N------------------------VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSH 73 (361)
T ss_dssp TEEECCSSCCS-S------------------------CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCS
T ss_pred CEEEeCCCCcC-c------------------------cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCC
Confidence 56788888887 3 343332 4589999999999988888888 999999999999
Q ss_pred CcCCCCCCCccCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEecCCCcCCCCccccccccccCCEEEccCcccccCCC
Q 002063 419 NDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIP 498 (973)
Q Consensus 419 N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 498 (973)
|+|+++.+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+
T Consensus 74 N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~ 153 (361)
T 2xot_A 74 NHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPV 153 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCG
T ss_pred CcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCH
Confidence 99999999999999999999999999998888889999999999999999998889999999999999999999997655
Q ss_pred ccc---cCccccchhhccccccccCCCccccccCC--CCeeecCCCccCC
Q 002063 499 NEM---GDCARIVDLNLARNSLSGNIPRSLSLLSS--LNALNLSGNKLTG 543 (973)
Q Consensus 499 ~~~---~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~--L~~L~L~~N~l~~ 543 (973)
..| ..+++|+.|+|++|+|++..+..|..++. ++.|+|++|++..
T Consensus 154 ~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 154 ELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp GGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEEC
T ss_pred HHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccC
Confidence 556 67999999999999999776678888887 4899999999984
No 367
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.76 E-value=9e-20 Score=214.68 Aligned_cols=216 Identities=21% Similarity=0.195 Sum_probs=150.8
Q ss_pred CCccccceeeccccccCCCCCccccccccccccccccccccccCChhhhhhhhHHHHHhhhccCCCCCCCcccCccccce
Q 002063 310 GDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQR 389 (973)
Q Consensus 310 ~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~ 389 (973)
...++|+.|+|++|+++ .+|..++.+++|+.|++++|...... ..+....+..+..|..++.+++|+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l-----------~~ll~~~~~~~~~~~~l~~l~~L~~ 413 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTI-----------ILLMRALDPLLYEKETLQYFSTLKA 413 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHH-----------HHHHHHHCTGGGHHHHHHHHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhH-----------HHHHHhcccccCCHHHHHHHHhccc
Confidence 45677888888888887 67888888888888888766531111 1122234556667777788888888
Q ss_pred Ee-cccccccccCCccccCCCCcceEeccCCcCCCCCCCccCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEecCCCc
Q 002063 390 LR-ISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNN 468 (973)
Q Consensus 390 L~-Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 468 (973)
|+ ++.|.+. +|..+.+++|.++...+ ..|+.|+|++|+|++ +|. ++.+++|+.|+|++|+
T Consensus 414 L~~l~~n~~~-----------~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~ 474 (567)
T 1dce_A 414 VDPMRAAYLD-----------DLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNR 474 (567)
T ss_dssp HCGGGHHHHH-----------HHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSC
T ss_pred Ccchhhcccc-----------hhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccc
Confidence 88 6776553 34555566666554332 247778888888774 565 7778888888888888
Q ss_pred CCCCccccccccccCCEEEccCcccccCCCccccCccccchhhccccccccCC-CccccccCCCCeeecCCCccCCCCCc
Q 002063 469 FSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNI-PRSLSLLSSLNALNLSGNKLTGSIPD 547 (973)
Q Consensus 469 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~ 547 (973)
|+ .+|..++++++|+.|+|++|+|++ +| .++++++|+.|+|++|+|++.. |..|..+++|+.|+|++|+|++.+|.
T Consensus 475 l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 551 (567)
T 1dce_A 475 LR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGI 551 (567)
T ss_dssp CC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSC
T ss_pred cc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccH
Confidence 87 667778888888888888888875 45 7777888888888888888766 77788888888888888888765553
Q ss_pred h---hhccc-CceEEc
Q 002063 548 N---LMKLK-LSSIDL 559 (973)
Q Consensus 548 ~---~~~l~-L~~l~l 559 (973)
. +..++ |+.||+
T Consensus 552 ~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 552 QERLAEMLPSVSSILT 567 (567)
T ss_dssp TTHHHHHCTTCSEEEC
T ss_pred HHHHHHHCcccCccCC
Confidence 2 12233 666654
No 368
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.75 E-value=1.1e-18 Score=185.43 Aligned_cols=171 Identities=22% Similarity=0.275 Sum_probs=118.1
Q ss_pred CCCCCcEEeCCCCcccCccCccccCCCCCcEEEecCCcccCCCCCcCCCCCCCEEeccCcccCCccccccccccccceEE
Q 002063 95 ALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLS 174 (973)
Q Consensus 95 ~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 174 (973)
.+.+++.++++.|.+++. + .+..+++|++|++++|.+...+ .++.+++|++|+|++|++++..+ +..+++|++|+
T Consensus 17 ~l~~l~~l~l~~~~i~~~-~-~~~~l~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~ 91 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDL-V-SQKELSGVQNFNGDNSNIQSLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELS 91 (263)
T ss_dssp HHHHHHHHHHTCSCTTSE-E-CHHHHTTCSEEECTTSCCCCCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEE
T ss_pred HHHHHHHHHhcCCCcccc-c-chhhcCcCcEEECcCCCcccch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEE
Confidence 355566667777777643 2 5667777777777777776544 67777777777777777775444 67777777777
Q ss_pred ccCCcCCCCCCcccccCCCCCCEEEcccccCCCCCChhhhccCCCCeeeccccccccccchhhhccccccEEEeecccCC
Q 002063 175 IGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLT 254 (973)
Q Consensus 175 l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~ 254 (973)
+++|.++. +|... . ++|++|+|++|++++. +.+..+++|++|+|++|+|++. + .++.+++|++|+|++|+++
T Consensus 92 L~~N~l~~--l~~~~-~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 92 VNRNRLKN--LNGIP-S-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp CCSSCCSC--CTTCC-C-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCC
T ss_pred CCCCccCC--cCccc-c-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCc
Confidence 77777753 33322 2 7778888888877753 3577777888888888877743 3 5777777777777777777
Q ss_pred CCCCccccccccccEEEeeccccccc
Q 002063 255 GELPAELGNLTLLQEFDISSNQMYGK 280 (973)
Q Consensus 255 ~~~~~~l~~l~~L~~L~Ls~N~l~~~ 280 (973)
+. ..+..+++|+.|++++|.+.+.
T Consensus 164 ~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 164 NT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp BC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred ch--HHhccCCCCCEEeCCCCcccCC
Confidence 54 5577777778888887777643
No 369
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.74 E-value=4.2e-18 Score=172.71 Aligned_cols=155 Identities=16% Similarity=0.232 Sum_probs=115.3
Q ss_pred cccCccccceEecccccccccCCccccCCCCcceEeccCCcCCCCCCCccCCCCCCCEEEcccCCCCCCCChhhhcCCCC
Q 002063 380 SYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNL 459 (973)
Q Consensus 380 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L 459 (973)
..+.+++|++|++++|.++ .+| .+..+++|+.|++++|.++.. +.+..+++|++|++++|++++..|..++.+++|
T Consensus 39 ~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~~--~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L 114 (197)
T 4ezg_A 39 TEAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATNY--NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSL 114 (197)
T ss_dssp BHHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSCC--GGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTC
T ss_pred ChhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCcc--hhhhcCCCCCEEEeECCccCcccChhhcCCCCC
Confidence 4577899999999999998 555 688888888888888866533 356777888888888888877677777888888
Q ss_pred CEEecCCCcCCCCccccccccccCCEEEccCcc-cccCCCccccCccccchhhccccccccCCCccccccCCCCeeecCC
Q 002063 460 ERLILTNNNFSGKIPSALGALRQLSSLHLEENA-LTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSG 538 (973)
Q Consensus 460 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 538 (973)
++|+|++|++++..|..+..+++|++|+|++|+ ++ .+| .+..+++|+.|++++|++++ ++ .+..+++|+.|++++
T Consensus 115 ~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~ 190 (197)
T 4ezg_A 115 TLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFS 190 (197)
T ss_dssp CEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECB
T ss_pred CEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeC
Confidence 888888888877677777788888888888887 54 344 56777777777777777764 33 566777777777777
Q ss_pred CccC
Q 002063 539 NKLT 542 (973)
Q Consensus 539 N~l~ 542 (973)
|++.
T Consensus 191 N~i~ 194 (197)
T 4ezg_A 191 QTIG 194 (197)
T ss_dssp C---
T ss_pred cccC
Confidence 7765
No 370
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.74 E-value=4.4e-18 Score=171.60 Aligned_cols=112 Identities=28% Similarity=0.395 Sum_probs=60.8
Q ss_pred CCCEEEcccCCCCCCCCh-hhhcCCCCCEEecCCCcCCCCccccccccccCCEEEccCcccccCCCccccCccccchhhc
Q 002063 434 SLSQLVLQNNRFSGELPS-ELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNL 512 (973)
Q Consensus 434 ~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 512 (973)
+|++|+|++|+|++..+. .+..+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|+.|+|
T Consensus 30 ~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 109 (192)
T 1w8a_A 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEEC
Confidence 455555555555543332 2555555555555555555555555555555555555555555555555555555555555
Q ss_pred cccccccCCCccccccCCCCeeecCCCccCCCC
Q 002063 513 ARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSI 545 (973)
Q Consensus 513 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 545 (973)
++|+|++..|..|..+++|++|+|++|++++..
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 142 (192)
T 1w8a_A 110 YDNQISCVMPGSFEHLNSLTSLNLASNPFNCNC 142 (192)
T ss_dssp CSSCCCEECTTSSTTCTTCCEEECTTCCBCCSG
T ss_pred CCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcC
Confidence 555555555555555555555555555555443
No 371
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.74 E-value=8.6e-20 Score=214.86 Aligned_cols=203 Identities=18% Similarity=0.185 Sum_probs=160.0
Q ss_pred cccccccccccccccccccCChhhhhhhhHHHHHhhhccCCCCCCCcccCccccceEecccccccccCCccccCCCCcce
Q 002063 334 GRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGM 413 (973)
Q Consensus 334 ~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 413 (973)
..+++|+.|+|++|+++ .+|..+..+..+.++. ++|+.. +..+.. .+..+.+.+.+|..+..+++|+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~-l~~n~~---------l~~l~~-ll~~~~~~~~~~~~l~~l~~L~~ 413 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELE-PENKWC---------LLTIIL-LMRALDPLLYEKETLQYFSTLKA 413 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHC-TTCHHH---------HHHHHH-HHHHHCTGGGHHHHHHHHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhc-cccchh---------hhhHHH-HHHhcccccCCHHHHHHHHhccc
Confidence 56789999999999998 6777766655543332 222221 000000 01122255678888889999999
Q ss_pred Ee-ccCCcCCCCCCCccCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEecCCCcCCCCccccccccccCCEEEccCcc
Q 002063 414 LD-FGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENA 492 (973)
Q Consensus 414 L~-L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 492 (973)
|+ ++.|.+ ..|..+.+++|.++.. |. ..|+.|+|++|+|++ +|. ++.+++|+.|+|++|+
T Consensus 414 L~~l~~n~~-----------~~L~~l~l~~n~i~~l-~~-----~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~ 474 (567)
T 1dce_A 414 VDPMRAAYL-----------DDLRSKFLLENSVLKM-EY-----ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNR 474 (567)
T ss_dssp HCGGGHHHH-----------HHHHHHHHHHHHHHHH-HH-----TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSC
T ss_pred Ccchhhccc-----------chhhhhhhhccccccc-Cc-----cCceEEEecCCCCCC-CcC-ccccccCcEeecCccc
Confidence 98 777754 3577788888888742 22 259999999999996 676 9999999999999999
Q ss_pred cccCCCccccCccccchhhccccccccCCCccccccCCCCeeecCCCccCCCC-Cchhhccc-CceEEccCCccccccCc
Q 002063 493 LTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSI-PDNLMKLK-LSSIDLSENQLSGSVPL 570 (973)
Q Consensus 493 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~-L~~l~ls~N~l~~~~p~ 570 (973)
|+ .+|..++++++|+.|+|++|+|++ +| .|..+++|+.|+|++|+|++.+ |..+..++ |+.|+|++|++++.+|.
T Consensus 475 l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 551 (567)
T 1dce_A 475 LR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGI 551 (567)
T ss_dssp CC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSC
T ss_pred cc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccH
Confidence 99 789999999999999999999996 67 8999999999999999999877 99999987 99999999999988764
No 372
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.74 E-value=1.6e-18 Score=174.92 Aligned_cols=154 Identities=23% Similarity=0.392 Sum_probs=132.1
Q ss_pred CEEEcccCCCCCCCChhhhcCCCCCEEecCCCcCCCCccc-cccccccCCEEEccCcccccCCCccccCccccchhhccc
Q 002063 436 SQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPS-ALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLAR 514 (973)
Q Consensus 436 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 514 (973)
+.+++++|+++ .+|..+.. +|++|+|++|++++..+. .|..+++|++|+|++|+|++..|..|.++++|+.|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 68899999997 67765543 899999999999976664 599999999999999999999999999999999999999
Q ss_pred cccccCCCccccccCCCCeeecCCCccCCCCCchhhccc-CceEEccCCccccccCcccc-cCCCCccccCCCCCccCcc
Q 002063 515 NSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLK-LSSIDLSENQLSGSVPLDFL-RMGGDGAFAGNEGLCLDQS 592 (973)
Q Consensus 515 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-L~~l~ls~N~l~~~~p~~~~-~~~~~~~~~~n~~lc~~~~ 592 (973)
|+|++..+..|..+++|++|+|++|+|++.+|..+..++ |+.|+|++|+|+|.++..+. .+-....+.++...|+.|.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P~ 167 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAPS 167 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSST
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCCh
Confidence 999999999999999999999999999999999998886 99999999999999997532 1111123456667888765
No 373
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.74 E-value=2.5e-18 Score=182.74 Aligned_cols=168 Identities=21% Similarity=0.288 Sum_probs=146.0
Q ss_pred ceEEEeecCCCCCccccccccCCCCCcEEeCCCCcccCccCccccCCCCCcEEEecCCcccCCCCCcCCCCCCCEEeccC
Q 002063 74 RVTEISFDNKSLSGEISSSISALQSLTVLSLPFNVLSGKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSI 153 (973)
Q Consensus 74 ~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~ 153 (973)
.++.+++.++++++.. .+..+++|++|++++|+++ .+| .++.+++|++|+|++|++++.++ ++.+++|++|+|++
T Consensus 20 ~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~-l~~l~~L~~L~L~~ 94 (263)
T 1xeu_A 20 NAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP-LKDLTKLEELSVNR 94 (263)
T ss_dssp HHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG-GTTCSSCCEEECCS
T ss_pred HHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh-hccCCCCCEEECCC
Confidence 4566778888887543 6889999999999999998 456 79999999999999999998877 99999999999999
Q ss_pred cccCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccccCCCCCChhhhccCCCCeeecccccccccc
Q 002063 154 NYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEF 233 (973)
Q Consensus 154 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~ 233 (973)
|++++. |. +.. ++|++|++++|.++. + +.+..+++|++|+|++|++++. + .+..+++|++|+|++|+|++.
T Consensus 95 N~l~~l-~~-~~~-~~L~~L~L~~N~l~~--~-~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~- 165 (263)
T 1xeu_A 95 NRLKNL-NG-IPS-ACLSRLFLDNNELRD--T-DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT- 165 (263)
T ss_dssp SCCSCC-TT-CCC-SSCCEEECCSSCCSB--S-GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC-
T ss_pred CccCCc-Cc-ccc-CcccEEEccCCccCC--C-hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch-
Confidence 999864 33 233 999999999999975 3 4699999999999999999965 4 699999999999999999966
Q ss_pred chhhhccccccEEEeecccCCCC
Q 002063 234 PRSIRKLQKLWKIELYANNLTGE 256 (973)
Q Consensus 234 p~~l~~l~~L~~L~L~~n~l~~~ 256 (973)
..+..+++|+.|++++|.+++.
T Consensus 166 -~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 166 -GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp -TTSTTCCCCCEEEEEEEEEECC
T ss_pred -HHhccCCCCCEEeCCCCcccCC
Confidence 7789999999999999999965
No 374
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.73 E-value=1.1e-17 Score=169.55 Aligned_cols=153 Identities=18% Similarity=0.237 Sum_probs=75.3
Q ss_pred cCCCCCcEEEecCCcccCCCCCcCCCCCCCEEeccCcccCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCE
Q 002063 118 SNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTY 197 (973)
Q Consensus 118 ~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~ 197 (973)
+.+++|++|++++|.+...+ .+..+++|++|++++|.++. +..+..+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~l~~n~~~~---------------------------~~~l~~l~~L~~ 92 (197)
T 4ezg_A 41 AQMNSLTYITLANINVTDLT-GIEYAHNIKDLTINNIHATN---------------------------YNPISGLSNLER 92 (197)
T ss_dssp HHHHTCCEEEEESSCCSCCT-TGGGCTTCSEEEEESCCCSC---------------------------CGGGTTCTTCCE
T ss_pred hhcCCccEEeccCCCccChH-HHhcCCCCCEEEccCCCCCc---------------------------chhhhcCCCCCE
Confidence 45555666666666655333 45555556666655554431 123444445555
Q ss_pred EEcccccCCCCCChhhhccCCCCeeeccccccccccchhhhccccccEEEeeccc-CCCCCCccccccccccEEEeeccc
Q 002063 198 LFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANN-LTGELPAELGNLTLLQEFDISSNQ 276 (973)
Q Consensus 198 L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~-l~~~~~~~l~~l~~L~~L~Ls~N~ 276 (973)
|++++|++++..+..++.+++|++|++++|++++..|..++.+++|++|++++|. ++ .+| .+..+++|++|++++|+
T Consensus 93 L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~ 170 (197)
T 4ezg_A 93 LRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDG 170 (197)
T ss_dssp EEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBC
T ss_pred EEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCC
Confidence 5555555544444445555555555555555554444555555555555555554 33 233 34555555555555555
Q ss_pred cccccCCccCCCCCccEEEcccCCCC
Q 002063 277 MYGKLPEEIGNLKNLTVFQCFKNNFS 302 (973)
Q Consensus 277 l~~~~p~~~~~l~~L~~L~l~~N~l~ 302 (973)
+++ ++ .+..+++|+.|++++|+|.
T Consensus 171 i~~-~~-~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 171 VHD-YR-GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp CCC-CT-TGGGCSSCCEEEECBC---
T ss_pred CcC-hH-HhccCCCCCEEEeeCcccC
Confidence 542 22 3444445555555554443
No 375
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.72 E-value=1.8e-18 Score=210.25 Aligned_cols=154 Identities=21% Similarity=0.259 Sum_probs=107.5
Q ss_pred CCCCcccCccccceEecccccccccCCccccCCCCcceEeccCCcCCCCCCCccCCCCCCCEEEcccCCCCCCCChhhhc
Q 002063 376 EVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGR 455 (973)
Q Consensus 376 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~ 455 (973)
..+..+..++.|+.|+|++|.+. .+|..++.+++|++|+|++|+|+ .++..++.+++|++|+|++|+|+ .+|..|+.
T Consensus 215 ~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 291 (727)
T 4b8c_D 215 MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGS 291 (727)
T ss_dssp -------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGG
T ss_pred cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcC
Confidence 45667788888888888888887 67777778888888888888887 45566778888888888888888 67888888
Q ss_pred CCCCCEEecCCCcCCCCccccccccccCCEEEccCcccccCCCccccCccc-cchhhccccccccCCCccccccCCCCee
Q 002063 456 LTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCAR-IVDLNLARNSLSGNIPRSLSLLSSLNAL 534 (973)
Q Consensus 456 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 534 (973)
+++|++|+|++|.|+ .+|..|+.+++|+.|+|++|+|++.+|..+..+.. +..|+|++|.+++.+|.. |+.|
T Consensus 292 l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l 364 (727)
T 4b8c_D 292 CFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFI 364 (727)
T ss_dssp GTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC----------
T ss_pred CCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc------ccee
Confidence 888888888888886 66777888888888888888888777777765432 234778888888777653 4455
Q ss_pred ecCCC
Q 002063 535 NLSGN 539 (973)
Q Consensus 535 ~L~~N 539 (973)
++++|
T Consensus 365 ~l~~n 369 (727)
T 4b8c_D 365 EINTD 369 (727)
T ss_dssp -----
T ss_pred Eeecc
Confidence 66666
No 376
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.71 E-value=1.6e-17 Score=175.85 Aligned_cols=136 Identities=17% Similarity=0.198 Sum_probs=104.8
Q ss_pred CcccCeecccCcEEEEEEEEcCCCce--EEEEEeeccc--------------------------cHHHHHHHHHHHHhcC
Q 002063 678 LEEDNLIGSGGTGKVYRLDLKKNAGT--VAVKQLWKGD--------------------------GVKVFAAEMEILGKIR 729 (973)
Q Consensus 678 ~~~~~~lG~G~~g~Vy~a~~~~~~~~--vavK~~~~~~--------------------------~~~~~~~E~~~l~~l~ 729 (973)
|++.+.||+|+||.||+|.+..+|+. ||||++.... ....+.+|+++++++.
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 56778999999999999999666888 9999864321 0135788999999998
Q ss_pred CCce--eeEeEEEEeCCeeEEEEEccCC-C----chHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEe
Q 002063 730 HRNI--LKLYACLLKGGSSFLVLEYMPN-G----NLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIH 802 (973)
Q Consensus 730 hpni--v~l~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH 802 (973)
|+++ ..++++ ...++||||+.+ | +|.++... .++.....++.|++.|++|||. +.+|+|
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~--------~~~~~~~~i~~qi~~~l~~lH~--~~givH 194 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE--------LKELDVEGIFNDVVENVKRLYQ--EAELVH 194 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG--------GGGSCHHHHHHHHHHHHHHHHH--TSCEEC
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc--------cChHHHHHHHHHHHHHHHHHHH--HCCEEe
Confidence 8864 333332 356899999942 4 66554321 1233566889999999999994 468999
Q ss_pred cCCCCCCeeecCCCceEEecccCCccc
Q 002063 803 RDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 803 ~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
|||||+|||++. .++|+|||+|...
T Consensus 195 rDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 195 ADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp SSCSTTSEEESS--SEEECCCTTCEET
T ss_pred CCCCHHHEEEcC--cEEEEECcccccC
Confidence 999999999998 9999999999754
No 377
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.69 E-value=2.7e-17 Score=165.76 Aligned_cols=154 Identities=21% Similarity=0.317 Sum_probs=110.5
Q ss_pred CEEEcccCCCCCCCChhhhcCCCCCEEecCCCcCCCCccccccccccCCEEEccCcccccCCCccccCccccchhhcccc
Q 002063 436 SQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARN 515 (973)
Q Consensus 436 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 515 (973)
+.+++++|+++ .+|..+ .++|+.|+|++|+|+ .+|..|.++++|+.|+|++|+|++..+..|.++++|+.|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~--~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGI--PRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCC--CTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCC--CCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 46677777776 455443 256778888888877 56677778888888888888888777777888888888888888
Q ss_pred ccccCCCccccccCCCCeeecCCCccCCCCCchhhccc-CceEEccCCccccccCccccc-CCCCccccCCCCCccCccc
Q 002063 516 SLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLK-LSSIDLSENQLSGSVPLDFLR-MGGDGAFAGNEGLCLDQST 593 (973)
Q Consensus 516 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-L~~l~ls~N~l~~~~p~~~~~-~~~~~~~~~n~~lc~~~~~ 593 (973)
+|++..|..|..+++|+.|+|++|+|++..+..+..++ |+.|+|++|+|.|.|...|.. +-.......+...|+.|..
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~l~~l~~~~~~~~~~~~~~~C~~P~~ 168 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGPGE 168 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGGGHHHHHHHHHSSCCCSCCBEEESGG
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCcCHHHHHHHHhccCCCCCcCcCCchH
Confidence 88877777888888888999999988865555677775 899999999999988864321 1110112233456776653
No 378
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.69 E-value=1.1e-17 Score=184.38 Aligned_cols=102 Identities=10% Similarity=0.047 Sum_probs=62.7
Q ss_pred CCCCCEEEcccCCCCCCCChhhhcCCCCCEEecCCCcCCCCccccccccccCC-EEEccCcccccCCCccccCccccchh
Q 002063 432 STSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLS-SLHLEENALTGSIPNEMGDCARIVDL 510 (973)
Q Consensus 432 ~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L 510 (973)
+++|+.|+|++|+++...+..|.++.+|+.|+|.+| ++.+.+.+|.++++|+ .|++.+ +++.+.+.+|.++++|+.+
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 355666666666665555555666666666666665 5544455666666666 666666 5555555666666666666
Q ss_pred hccccccccCCCccccccCCCCeee
Q 002063 511 NLARNSLSGNIPRSLSLLSSLNALN 535 (973)
Q Consensus 511 ~Ls~N~l~~~~p~~~~~l~~L~~L~ 535 (973)
++++|+++.+.+..|.++++|+.++
T Consensus 303 ~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 303 LATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp EECSSCCCEECTTTTCTTCCCCEEE
T ss_pred EeCCCccCccchhhhcCCcchhhhc
Confidence 6666666655556666666666665
No 379
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.68 E-value=2.3e-17 Score=181.84 Aligned_cols=221 Identities=12% Similarity=0.022 Sum_probs=129.7
Q ss_pred cccccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCccccceeeccccc----cCCCCCccccccccc
Q 002063 264 LTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNR----FSGPFPENLGRYTAL 339 (973)
Q Consensus 264 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~----l~~~~~~~l~~l~~L 339 (973)
+++|+.|+|.+ .++...+..|.++++|+.+++.+|.+....+.+|.++.++..+.+..+. ........|..+..|
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L 178 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPL 178 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCC
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccccc
Confidence 66666666666 5554555556666666666666666665555666666666665554422 122223344455555
Q ss_pred c-ccccccccccccCChhhhhhhhHHHHHhhhccCCCCCCCcccCccccceEecccccccccCCccc-cCCCCcceEecc
Q 002063 340 T-DVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGL-WALPNVGMLDFG 417 (973)
Q Consensus 340 ~-~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~L~ 417 (973)
+ .+++.... .++..+.. .-....+++.+.+.++-.. .....+ ..+++|+.|+|+
T Consensus 179 ~~~i~~~~~~---~l~~~~~~--------------------~~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~ 234 (329)
T 3sb4_A 179 ETTIQVGAMG---KLEDEIMK--------------------AGLQPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDIS 234 (329)
T ss_dssp EEEEEECTTC---CHHHHHHH--------------------TTCCGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECT
T ss_pred ceeEEecCCC---cHHHHHhh--------------------cccCccccceEEEeeeecH-HHHHHHHHhcCCCeEEECC
Confidence 5 33332211 11111110 0012344555555544221 111111 125677777777
Q ss_pred CCcCCCCCCCccCCCCCCCEEEcccCCCCCCCChhhhcCCCCC-EEecCCCcCCCCccccccccccCCEEEccCcccccC
Q 002063 418 DNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLE-RLILTNNNFSGKIPSALGALRQLSSLHLEENALTGS 496 (973)
Q Consensus 418 ~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~-~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 496 (973)
+|+++.+....|..+++|+.|+|.+| ++...+..|.++.+|+ .|++.+ +++.+.+.+|.++++|+.|++++|+++..
T Consensus 235 ~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I 312 (329)
T 3sb4_A 235 KTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTL 312 (329)
T ss_dssp TBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEE
T ss_pred CCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCcc
Confidence 77777777777777777777777776 6656666777777777 777777 66655667777777888888777777777
Q ss_pred CCccccCccccchhh
Q 002063 497 IPNEMGDCARIVDLN 511 (973)
Q Consensus 497 ~p~~~~~l~~L~~L~ 511 (973)
.+.+|.++++|+.++
T Consensus 313 ~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 313 GDELFGNGVPSKLIY 327 (329)
T ss_dssp CTTTTCTTCCCCEEE
T ss_pred chhhhcCCcchhhhc
Confidence 777777777777665
No 380
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.68 E-value=1.6e-16 Score=156.59 Aligned_cols=135 Identities=21% Similarity=0.232 Sum_probs=105.8
Q ss_pred CCCCCcEEeCCCCccc-CccCccccCCCCCcEEEecCCcccCCCCCcCCCCCCCEEeccCcccCCccccccccccccceE
Q 002063 95 ALQSLTVLSLPFNVLS-GKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSL 173 (973)
Q Consensus 95 ~l~~L~~L~Ls~n~l~-~~~p~~l~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 173 (973)
..++|++|+|++|.++ +.+|..+..+++|++|+|++|.+.+. +.++.+++|++|+|++|.+++.+|..+..+++|++|
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV-SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC-SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh-hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 3477899999999987 77888888999999999999998877 778888999999999999887777777778888888
Q ss_pred EccCCcCCCCCCcccccCCCCCCEEEcccccCCCCCC---hhhhccCCCCeeeccccccc
Q 002063 174 SIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIP---ESISELRELGTLDICRNKIS 230 (973)
Q Consensus 174 ~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p---~~l~~l~~L~~L~L~~n~l~ 230 (973)
++++|.++....+..+..+++|++|++++|.+++..+ ..+..+++|++|++++|.+.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 8888877643333667777777777777777775544 46677777777777777765
No 381
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.65 E-value=4e-16 Score=153.71 Aligned_cols=133 Identities=20% Similarity=0.163 Sum_probs=104.2
Q ss_pred ccccceEeccccccc-ccCCccccCCCCcceEeccCCcCCCCCCCccCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEE
Q 002063 384 CKTIQRLRISDNHLS-GKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERL 462 (973)
Q Consensus 384 l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 462 (973)
.++|++|+|++|.++ +.+|..+..+++|+.|++++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 378999999999998 77888888888999999999988876 677788888888888888887778777778888888
Q ss_pred ecCCCcCCCCc-cccccccccCCEEEccCcccccCCC---ccccCccccchhhccccccc
Q 002063 463 ILTNNNFSGKI-PSALGALRQLSSLHLEENALTGSIP---NEMGDCARIVDLNLARNSLS 518 (973)
Q Consensus 463 ~L~~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~Ls~N~l~ 518 (973)
+|++|++++.. +..+..+++|+.|++++|++++..+ ..+..+++|+.|++++|.+.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 88888887542 2677778888888888888775544 35666666666666666665
No 382
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.65 E-value=2.2e-16 Score=152.04 Aligned_cols=130 Identities=22% Similarity=0.242 Sum_probs=103.0
Q ss_pred CCCCCcEEeCCCCccc-CccCccccCCCCCcEEEecCCcccCCCCCcCCCCCCCEEeccCcccCCccccccccccccceE
Q 002063 95 ALQSLTVLSLPFNVLS-GKLPLELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSL 173 (973)
Q Consensus 95 ~l~~L~~L~Ls~n~l~-~~~p~~l~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 173 (973)
..++|++|++++|.++ +.+|..++.+++|++|++++|.+.+. +.++.+++|++|+|++|.+++.+|..+..+++|++|
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI-ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC-TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc-hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 3478899999999998 78888889999999999999998887 778889999999999999987777777778888888
Q ss_pred EccCCcCCCCCCcccccCCCCCCEEEcccccCCCCCC---hhhhccCCCCeeecc
Q 002063 174 SIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIP---ESISELRELGTLDIC 225 (973)
Q Consensus 174 ~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p---~~l~~l~~L~~L~L~ 225 (973)
++++|.++....+..++.+++|++|++++|.+++..+ ..+..+++|++|+++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 8888877643334667777777777777777776555 466777777777765
No 383
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.63 E-value=7.6e-16 Score=155.10 Aligned_cols=111 Identities=26% Similarity=0.316 Sum_probs=99.5
Q ss_pred CCCCEEEcccCCCCCCCChhhhcCCCCCEEecCCCcCCCCccccccccccCCEEEccCcccccCCCccccCccccchhhc
Q 002063 433 TSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNL 512 (973)
Q Consensus 433 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 512 (973)
++|++|+|++|+|+ .+|..|..+++|+.|+|++|+|++..+..|.++++|++|+|++|+|++..|..|.++++|+.|+|
T Consensus 31 ~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L 109 (193)
T 2wfh_A 31 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSL 109 (193)
T ss_dssp TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEEC
Confidence 57888899999888 67788999999999999999999888888999999999999999999888888999999999999
Q ss_pred cccccccCCCccccccCCCCeeecCCCccCCC
Q 002063 513 ARNSLSGNIPRSLSLLSSLNALNLSGNKLTGS 544 (973)
Q Consensus 513 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 544 (973)
++|+|++..+..|..+++|+.|+|++|++...
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 110 HGNDISVVPEGAFNDLSALSHLAIGANPLYCD 141 (193)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CCCCCCeeChhhhhcCccccEEEeCCCCeecC
Confidence 99999977777889999999999999999853
No 384
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.63 E-value=9.1e-16 Score=152.53 Aligned_cols=132 Identities=21% Similarity=0.266 Sum_probs=84.8
Q ss_pred CCEEEcccCCCCCCCChhhhcCCCCCEEecCCCcCCCCccccccccccCCEEEccCcccccCCCccccCccccchhhccc
Q 002063 435 LSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLAR 514 (973)
Q Consensus 435 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 514 (973)
.+.+++++|+++ .+|..+ .++|+.|++++|++++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 345566666655 334322 24666666666666655555566666666666666666655555566667777777777
Q ss_pred cccccCCCccccccCCCCeeecCCCccCCCCCchhhccc-CceEEccCCccccccC
Q 002063 515 NSLSGNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLK-LSSIDLSENQLSGSVP 569 (973)
Q Consensus 515 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-L~~l~ls~N~l~~~~p 569 (973)
|+|++..+..|..+++|++|+|++|++++..+..+..++ |+.|+|++|++.|.+|
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 777665556666777777777777777754444455554 7777777777777776
No 385
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.62 E-value=7.7e-16 Score=148.27 Aligned_cols=128 Identities=21% Similarity=0.185 Sum_probs=93.2
Q ss_pred ccccceEeccccccc-ccCCccccCCCCcceEeccCCcCCCCCCCccCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEE
Q 002063 384 CKTIQRLRISDNHLS-GKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERL 462 (973)
Q Consensus 384 l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 462 (973)
.++|++|++++|.++ +.+|..+..+++|+.|++++|++++. ..+..+++|++|+|++|++++.+|..+..+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 478999999999998 77888888888888888888888766 566777777778887777776677777777777777
Q ss_pred ecCCCcCCCC-ccccccccccCCEEEccCcccccCCC---ccccCccccchhhcc
Q 002063 463 ILTNNNFSGK-IPSALGALRQLSSLHLEENALTGSIP---NEMGDCARIVDLNLA 513 (973)
Q Consensus 463 ~L~~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~Ls 513 (973)
++++|++++. .+..+..+++|++|++++|++++..+ ..+..+++|+.|+++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 7777777753 23667777777777777777765444 345555555555554
No 386
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.61 E-value=2.2e-15 Score=149.78 Aligned_cols=132 Identities=22% Similarity=0.267 Sum_probs=102.3
Q ss_pred ceEeccCCcCCCCCCCccCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEecCCCcCCCCccccccccccCCEEEccCc
Q 002063 412 GMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEEN 491 (973)
Q Consensus 412 ~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 491 (973)
+.+++++|+++..+.. ..++|++|++++|++++..+..+..+++|++|+|++|++++..+..|..+++|++|+|++|
T Consensus 10 ~~l~~~~~~l~~~p~~---~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 10 TEIRCNSKGLTSVPTG---IPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TEEECCSSCCSSCCTT---CCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCCccCCCC---CCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 3444444444443322 2357788888888888666667788888888888888888777777888888888888888
Q ss_pred ccccCCCccccCccccchhhccccccccCCCccccccCCCCeeecCCCccCCCCC
Q 002063 492 ALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLTGSIP 546 (973)
Q Consensus 492 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 546 (973)
++++..+..+..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++++..|
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 8887777778888899999999999987666667889999999999999997665
No 387
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.56 E-value=3.6e-14 Score=159.54 Aligned_cols=65 Identities=9% Similarity=0.169 Sum_probs=27.7
Q ss_pred ccccccccCCEEEccCcccccCCCccccCccccchhhccccccccCCCccccccCCCCeeecCCCccC
Q 002063 475 SALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKLT 542 (973)
Q Consensus 475 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 542 (973)
.+|.++++|+.++|. |.++.....+|.++.+|+.++|..| ++.+-+..|.++ +|+.+++++|.+.
T Consensus 294 ~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~ 358 (401)
T 4fdw_A 294 YCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPP 358 (401)
T ss_dssp TTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCC
T ss_pred HHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCc
Confidence 344444444444444 2233333344444444444444332 333333444444 4444444444444
No 388
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.55 E-value=1.1e-15 Score=167.39 Aligned_cols=136 Identities=15% Similarity=0.115 Sum_probs=98.1
Q ss_pred CcccCeecccCcEEEEEEEEcCCCceEEEEEeecc----------------ccHHH--------HHHHHHHHHhcCCCce
Q 002063 678 LEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG----------------DGVKV--------FAAEMEILGKIRHRNI 733 (973)
Q Consensus 678 ~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~----------------~~~~~--------~~~E~~~l~~l~hpni 733 (973)
|++.+.||+|+||.||+|.+.. |+.||||+++.. ..... ..+|...+.++.+.++
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~~-G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADEK-GKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECTT-CCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEecCEeeeCCceEEEEEECCC-CCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 8899999999999999999864 899999986431 00111 2346667777755444
Q ss_pred eeEeEEEEeCCeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeec
Q 002063 734 LKLYACLLKGGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLD 813 (973)
Q Consensus 734 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~ 813 (973)
....-+... ..++||||++|++|.++.. . .....++.|++.+|.++| +.+||||||||.|||++
T Consensus 176 ~vp~p~~~~--~~~LVME~i~G~~L~~l~~---------~--~~~~~l~~qll~~l~~lH---~~gIVHrDLKp~NILl~ 239 (397)
T 4gyi_A 176 PVPEPIAQS--RHTIVMSLVDALPMRQVSS---------V--PDPASLYADLIALILRLA---KHGLIHGDFNEFNILIR 239 (397)
T ss_dssp SCCCEEEEE--TTEEEEECCSCEEGGGCCC---------C--SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEE
T ss_pred CCCeeeecc--CceEEEEecCCccHhhhcc---------c--HHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEe
Confidence 322111111 2379999999988854321 1 123467899999999999 67999999999999998
Q ss_pred CCC----------ceEEecccCCcccc
Q 002063 814 EDY----------EPKIADFGVAKIAE 830 (973)
Q Consensus 814 ~~~----------~~kl~Dfgl~~~~~ 830 (973)
+++ .+.|.||+-+....
T Consensus 240 ~dgd~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 240 EEKDAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp EEECSSCTTSEEEEEEECCCTTCEETT
T ss_pred CCCCcccccccccceEEEEeCCcccCC
Confidence 876 38999999876543
No 389
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.55 E-value=4.4e-14 Score=158.84 Aligned_cols=266 Identities=11% Similarity=0.096 Sum_probs=204.1
Q ss_pred cccccEEEeecccCCCCCCccccccccccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCccccceee
Q 002063 240 LQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFS 319 (973)
Q Consensus 240 l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 319 (973)
...++.+.+.+ .++......|.++ +|+.+.+..| ++......|.+ .+|+.+.+.+ .+......+|.++++|+.++
T Consensus 112 ~~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~ 186 (401)
T 4fdw_A 112 LKGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKAD 186 (401)
T ss_dssp CSSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEE
T ss_pred cCCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeee
Confidence 36677777754 4554555677775 7999998876 66556666777 4688888875 67767777888999999999
Q ss_pred ccccccCCCCCccccccccccccccccccccccCChhhhhhhhHHHHHhhhccCCCCCCCcccCccccceEecccccccc
Q 002063 320 IYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSG 399 (973)
Q Consensus 320 l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~Ls~N~l~~ 399 (973)
+.+|.++......|. ..+|+.+.|..+ ++ . .-..+|.++++|+.+++..| ++.
T Consensus 187 l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~-~-----------------------I~~~aF~~~~~L~~l~l~~~-l~~ 239 (401)
T 4fdw_A 187 LSKTKITKLPASTFV-YAGIEEVLLPVT-LK-E-----------------------IGSQAFLKTSQLKTIEIPEN-VST 239 (401)
T ss_dssp CTTSCCSEECTTTTT-TCCCSEEECCTT-CC-E-----------------------ECTTTTTTCTTCCCEECCTT-CCE
T ss_pred cCCCcceEechhhEe-ecccCEEEeCCc-hh-e-----------------------ehhhHhhCCCCCCEEecCCC-ccC
Confidence 988888865555665 578888888744 43 1 23457888899999999876 565
Q ss_pred cCCccccCCCCcceEeccCCcCCCCCCCccCCCCCCCEEEcccCCCC-----CCCChhhhcCCCCCEEecCCCcCCCCcc
Q 002063 400 KIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFS-----GELPSELGRLTNLERLILTNNNFSGKIP 474 (973)
Q Consensus 400 ~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~-----~~~p~~~~~l~~L~~L~L~~N~l~~~~p 474 (973)
+...+|.+ .+|+.+.+ .|.++.+....|..+++|+.+++.+|.+. ...+..|.++++|+.++|. |.++.+..
T Consensus 240 I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~ 316 (401)
T 4fdw_A 240 IGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQ 316 (401)
T ss_dssp ECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECT
T ss_pred cccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhh
Confidence 66677776 78999999 56678788888999999999999888775 4566788899999999998 45776667
Q ss_pred ccccccccCCEEEccCcccccCCCccccCccccchhhccccccccCCCccccccC-CCCeeecCCCccC
Q 002063 475 SALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLS-SLNALNLSGNKLT 542 (973)
Q Consensus 475 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~ 542 (973)
.+|.++++|+.++|..| ++...+.+|.++ +|+.+++++|.+....+..|.+++ +++.|++..|.+.
T Consensus 317 ~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 317 GLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp TTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred hhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 78999999999999655 776777889999 999999999988877777787774 6778888777654
No 390
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.53 E-value=1.9e-14 Score=142.74 Aligned_cols=133 Identities=17% Similarity=0.185 Sum_probs=94.3
Q ss_pred cccCCCCCcEEeCCCCcccCccCccccCCC-CCcEEEecCCcccCCCCCcCCCCCCCEEeccCcccCCcccccccccccc
Q 002063 92 SISALQSLTVLSLPFNVLSGKLPLELSNCS-NLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQL 170 (973)
Q Consensus 92 ~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~-~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 170 (973)
.+..+.+|++|++++|+++ .+|. +..+. +|++|+|++|.+++. +.++.+++|++|+|++|.+++..+..+..+++|
T Consensus 14 ~~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL-DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EEECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE-CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred hcCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc-cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 4566778888888888887 3453 44444 888888888888776 667788888888888888875544555777777
Q ss_pred ceEEccCCcCCCCCCcc--cccCCCCCCEEEcccccCCCCCCh----hhhccCCCCeeeccccccc
Q 002063 171 VSLSIGDNVYDEAEIPE--SIGNLKNLTYLFLAHCNLRGRIPE----SISELRELGTLDICRNKIS 230 (973)
Q Consensus 171 ~~L~l~~n~l~~~~ip~--~~~~l~~L~~L~L~~n~l~~~~p~----~l~~l~~L~~L~L~~n~l~ 230 (973)
++|++++|.++ .+|. .+..+++|++|++++|.++ .+|. .+..+++|++||+++|.+.
T Consensus 91 ~~L~L~~N~i~--~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 91 TELILTNNSLV--ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CEEECCSCCCC--CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CEEECCCCcCC--cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 77777777775 3444 6677777777777777776 3444 3677777777777777665
No 391
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.53 E-value=1.5e-14 Score=143.52 Aligned_cols=134 Identities=22% Similarity=0.275 Sum_probs=85.7
Q ss_pred cccCccccceEecccccccccCCccccCCCCcceEeccCCcCCCCCCCccCCCCCCCEEEcccCCCCCCCChhhhcCCCC
Q 002063 380 SYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNL 459 (973)
Q Consensus 380 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L 459 (973)
.+.++.+|++|+|++|+++. +|......++|+.|++++|++++. +.+..+++|++|+|++|+|++..+..+..+++|
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~-i~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EEECTTSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred hcCCcCCceEEEeeCCCCch-hHHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 45667888888888888884 454333334777777777777765 456667777777777777775544555677777
Q ss_pred CEEecCCCcCCCCccc--cccccccCCEEEccCcccccCCCcc----ccCccccchhhccccccc
Q 002063 460 ERLILTNNNFSGKIPS--ALGALRQLSSLHLEENALTGSIPNE----MGDCARIVDLNLARNSLS 518 (973)
Q Consensus 460 ~~L~L~~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~----~~~l~~L~~L~Ls~N~l~ 518 (973)
++|+|++|+++ .+|. .+..+++|+.|++++|.++. +|.. +..+++|+.||+++|.+.
T Consensus 91 ~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 91 TELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCHH
Confidence 77777777775 4444 56666677777777776663 3332 444555555555555443
No 392
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.52 E-value=1.8e-16 Score=160.83 Aligned_cols=133 Identities=22% Similarity=0.263 Sum_probs=64.2
Q ss_pred cCCCCCcEEeCCCCcccCccCc------cccCCCCCcEEEecCCcccCCCCCcCCCCCCCEEeccCcccCCccccccccc
Q 002063 94 SALQSLTVLSLPFNVLSGKLPL------ELSNCSNLKVLNVTGNAMVGSVPDLSALKNLEIFDLSINYFTGRFPRWVVNL 167 (973)
Q Consensus 94 ~~l~~L~~L~Ls~n~l~~~~p~------~l~~l~~L~~L~L~~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l 167 (973)
.....++.++++.+.++|.+|. .|+.+++|++|+|++|.+.+.+ .+..+++|++|++++|.++ .+|..+..+
T Consensus 15 ~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~ 92 (198)
T 1ds9_A 15 EERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEKIS-SLSGMENLRILSLGRNLIK-KIENLDAVA 92 (198)
T ss_dssp HHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESCCC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHH
T ss_pred HhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcccc-ccccCCCCCEEECCCCCcc-cccchhhcC
Confidence 3344555555555555555444 5555555666665555555533 5555555555555555555 334444444
Q ss_pred cccceEEccCCcCCCCCCcccccCCCCCCEEEcccccCCCCCC-hhhhccCCCCeeecccccccc
Q 002063 168 TQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIP-ESISELRELGTLDICRNKISG 231 (973)
Q Consensus 168 ~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p-~~l~~l~~L~~L~L~~n~l~~ 231 (973)
++|++|++++|.++. +| .+..+++|++|++++|++++..+ ..+..+++|++|++++|.+++
T Consensus 93 ~~L~~L~L~~N~l~~--l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~ 154 (198)
T 1ds9_A 93 DTLEELWISYNQIAS--LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYN 154 (198)
T ss_dssp HHCSEEEEEEEECCC--HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHH
T ss_pred CcCCEEECcCCcCCc--CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccc
Confidence 444444444444432 22 34444444444444444442111 234444444444444444443
No 393
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.52 E-value=4.7e-16 Score=157.69 Aligned_cols=136 Identities=22% Similarity=0.279 Sum_probs=75.8
Q ss_pred CCCCCCEEeccCcccCCcccc------ccccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccccCCCCCChhhhc
Q 002063 142 ALKNLEIFDLSINYFTGRFPR------WVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGRIPESISE 215 (973)
Q Consensus 142 ~l~~L~~L~Ls~n~l~~~~~~------~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~~p~~l~~ 215 (973)
....++.++++.+.+++..|. .+..+++|++|++++|.++. +| .+.++++|++|++++|+++ .+|..+..
T Consensus 16 ~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~--l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~ 91 (198)
T 1ds9_A 16 ERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK--IS-SLSGMENLRILSLGRNLIK-KIENLDAV 91 (198)
T ss_dssp HTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC--CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHH
T ss_pred hcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc--cc-ccccCCCCCEEECCCCCcc-cccchhhc
Confidence 344455555555555544443 55555555555555555543 34 5555666666666666665 45555555
Q ss_pred cCCCCeeeccccccccccchhhhccccccEEEeecccCCCCCC-ccccccccccEEEeeccccccccCC
Q 002063 216 LRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELP-AELGNLTLLQEFDISSNQMYGKLPE 283 (973)
Q Consensus 216 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~-~~l~~l~~L~~L~Ls~N~l~~~~p~ 283 (973)
+++|++|+|++|++++ +| .+..+++|++|++++|++++..+ ..+..+++|++|++++|.+.+..|.
T Consensus 92 ~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 92 ADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp HHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred CCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 5666666666666653 33 45566666666666666663221 3455566666666666666554443
No 394
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.51 E-value=1.9e-13 Score=154.50 Aligned_cols=237 Identities=11% Similarity=0.065 Sum_probs=121.9
Q ss_pred ccccccccccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCccccceeeccccccCCCCCcccccccc
Q 002063 259 AELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTA 338 (973)
Q Consensus 259 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~ 338 (973)
..|.++++|+.+.+..+... .....|.++.+|+.+.+..| +.......|.++..|+.+.+..+... +.+.......
T Consensus 156 ~aF~~c~~L~~i~l~~~~~~-I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~ 231 (394)
T 4fs7_A 156 EAFATCESLEYVSLPDSMET-LHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY--LGDFALSKTG 231 (394)
T ss_dssp TTTTTCTTCCEEECCTTCCE-ECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTCC
T ss_pred hhhcccCCCcEEecCCccce-eccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceE--eehhhcccCC
Confidence 44556666666666544322 33444555556665555443 33333445555555555555443322 1122222334
Q ss_pred ccccccccccccccCChhhhhhhhHHHHHhhhccCCCCCCCcccCccccceEecccccccccCCccccCCCCcceEeccC
Q 002063 339 LTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGD 418 (973)
Q Consensus 339 L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 418 (973)
|+.+.+..+.- ......|..+..|+.+.+..+... .....|.....++.+....
T Consensus 232 l~~i~ip~~~~-------------------------~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~ 285 (394)
T 4fs7_A 232 VKNIIIPDSFT-------------------------ELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGS 285 (394)
T ss_dssp CCEEEECTTCC-------------------------EECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECS
T ss_pred CceEEECCCce-------------------------ecccccccccccceeEEcCCCcce-eeccccccccccceeccCc
Confidence 44444332111 112234556666666666665443 5555666666666666555
Q ss_pred CcCCCCCCCccCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEecCCCcCCCCccccccccccCCEEEccCcccccCCC
Q 002063 419 NDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIP 498 (973)
Q Consensus 419 N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 498 (973)
+.+ ....|..+.+|+.+.+..+ ++.....+|.++.+|+.++|.++ ++.+-..+|.++.+|+.+++..| ++..-.
T Consensus 286 ~~i---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~ 359 (394)
T 4fs7_A 286 VIV---PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGA 359 (394)
T ss_dssp SEE---CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECT
T ss_pred eee---ccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehH
Confidence 432 2334555666666666543 44344555666666666666533 44344456666666666666555 544445
Q ss_pred ccccCccccchhhccccccccCCCccccccCCCCe
Q 002063 499 NEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNA 533 (973)
Q Consensus 499 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 533 (973)
.+|.++.+|+.+++..+ ++ .+...|.++++|+.
T Consensus 360 ~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~ 392 (394)
T 4fs7_A 360 NAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKW 392 (394)
T ss_dssp TTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEE
T ss_pred HHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcE
Confidence 56666666666666544 22 23344555555544
No 395
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.49 E-value=5.4e-14 Score=138.34 Aligned_cols=105 Identities=22% Similarity=0.270 Sum_probs=54.3
Q ss_pred CCEEEcccCCCCCCCChhhhcCCCCCEEecCCCcCCCCccccccccccCCEEEccCcccccCCCccccCccccchhhccc
Q 002063 435 LSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLAR 514 (973)
Q Consensus 435 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 514 (973)
.+.+++++|+++ .+|..+ .++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|+.|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 355666666665 344433 24555555555555555555555555555555555555544444445555555555555
Q ss_pred cccccCCCccccccCCCCeeecCCCccC
Q 002063 515 NSLSGNIPRSLSLLSSLNALNLSGNKLT 542 (973)
Q Consensus 515 N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 542 (973)
|+|++..+..|..+++|+.|+|++|+++
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 115 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWD 115 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCC
Confidence 5554444444444444444444444444
No 396
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.47 E-value=7.8e-13 Score=149.40 Aligned_cols=122 Identities=11% Similarity=0.074 Sum_probs=70.3
Q ss_pred cccCccccceEecccccccccCCccccCCCCcceEeccCCcCCCCCCCccCCCCCCCEEEcccCCCCCCCChhhhcCCCC
Q 002063 380 SYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNL 459 (973)
Q Consensus 380 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L 459 (973)
.|..+..++.+....+.+ ....|....+|+.+.+.++ ++.+....|..+.+|+.++|.++ ++.....+|.++.+|
T Consensus 271 ~F~~~~~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L 345 (394)
T 4fs7_A 271 LFYNCSGLKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSL 345 (394)
T ss_dssp TTTTCTTCCEEEECSSEE---CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTC
T ss_pred ccccccccceeccCceee---ccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCC
Confidence 344444555554444332 2234455555555555433 44445555666666666666543 554555667777777
Q ss_pred CEEecCCCcCCCCccccccccccCCEEEccCcccccCCCccccCccccch
Q 002063 460 ERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVD 509 (973)
Q Consensus 460 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 509 (973)
+.+++..| ++.+...+|.++.+|+.+++..+ ++ .+...|.++++|+.
T Consensus 346 ~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~ 392 (394)
T 4fs7_A 346 SNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKW 392 (394)
T ss_dssp CEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEE
T ss_pred CEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcE
Confidence 77777665 55455567777777777777654 22 23456777776664
No 397
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.45 E-value=1.3e-13 Score=135.51 Aligned_cols=109 Identities=20% Similarity=0.249 Sum_probs=93.8
Q ss_pred CCCEEecCCCcCCCCccccccccccCCEEEccCcccccCCCccccCccccchhhccccccccCCCccccccCCCCeeecC
Q 002063 458 NLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLS 537 (973)
Q Consensus 458 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 537 (973)
..+.|++++|.++ .+|..+. ++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|++|+|+
T Consensus 10 ~~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 10 SGTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 3578999999998 5666553 789999999999998888889999999999999999998777788899999999999
Q ss_pred CCccCCCCCchhhccc-CceEEccCCccccccC
Q 002063 538 GNKLTGSIPDNLMKLK-LSSIDLSENQLSGSVP 569 (973)
Q Consensus 538 ~N~l~~~~p~~~~~l~-L~~l~ls~N~l~~~~p 569 (973)
+|+|++..|..+..++ |+.|+|++|+|+|.++
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 87 DNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CCccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 9999976666787775 9999999999999987
No 398
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.45 E-value=1.6e-13 Score=135.47 Aligned_cols=104 Identities=25% Similarity=0.325 Sum_probs=66.2
Q ss_pred CEEEcccCCCCCCCChhhhcCCCCCEEecCCCcCCCCccccccccccCCEEEccCcccccCCCccccCccccchhhcccc
Q 002063 436 SQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARN 515 (973)
Q Consensus 436 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 515 (973)
+.+++++|+++ .+|..+. ++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 56777777775 4555443 56777777777776666666666666777777777666555555566666666666666
Q ss_pred ccccCCCccccccCCCCeeecCCCccC
Q 002063 516 SLSGNIPRSLSLLSSLNALNLSGNKLT 542 (973)
Q Consensus 516 ~l~~~~p~~~~~l~~L~~L~L~~N~l~ 542 (973)
+|++..+..|..+++|+.|+|++|+++
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc
Confidence 666544444666666666666666665
No 399
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.43 E-value=2.5e-13 Score=134.05 Aligned_cols=108 Identities=20% Similarity=0.250 Sum_probs=85.9
Q ss_pred CCEEecCCCcCCCCccccccccccCCEEEccCcccccCCCccccCccccchhhccccccccCCCccccccCCCCeeecCC
Q 002063 459 LERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSG 538 (973)
Q Consensus 459 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 538 (973)
-+.+++++|+++ .+|..+. ++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|++|+|++
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 367888888886 5666554 7888888888888888788888888888888888888876666678888888888888
Q ss_pred CccCCCCCchhhccc-CceEEccCCccccccC
Q 002063 539 NKLTGSIPDNLMKLK-LSSIDLSENQLSGSVP 569 (973)
Q Consensus 539 N~l~~~~p~~~~~l~-L~~l~ls~N~l~~~~p 569 (973)
|+|++..+..+..++ |+.|+|++|+|.|.++
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred CccceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 888865555577775 8888888888888776
No 400
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.36 E-value=1.3e-12 Score=145.03 Aligned_cols=107 Identities=23% Similarity=0.268 Sum_probs=59.4
Q ss_pred EecCCC-cCCCCccccccccccCCEEEccC-cccccCCCccccCccccchhhccccccccCCCccccccCCCCeeecCCC
Q 002063 462 LILTNN-NFSGKIPSALGALRQLSSLHLEE-NALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGN 539 (973)
Q Consensus 462 L~L~~N-~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 539 (973)
++++++ +++ .+|. +..+++|+.|+|++ |+|++..+..|+++++|+.|+|++|+|++..|..|.++++|+.|+|++|
T Consensus 13 v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 13 LRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp EECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 344444 444 2444 55555555555553 5555444455555555555555555555555555566666666666666
Q ss_pred ccCCCCCchhhcccCceEEccCCccccccCc
Q 002063 540 KLTGSIPDNLMKLKLSSIDLSENQLSGSVPL 570 (973)
Q Consensus 540 ~l~~~~p~~~~~l~L~~l~ls~N~l~~~~p~ 570 (973)
+|++.+|..+..++|+.|+|++|+|.|.|..
T Consensus 91 ~l~~~~~~~~~~~~L~~l~l~~N~~~c~c~l 121 (347)
T 2ifg_A 91 ALESLSWKTVQGLSLQELVLSGNPLHCSCAL 121 (347)
T ss_dssp CCSCCCSTTTCSCCCCEEECCSSCCCCCGGG
T ss_pred ccceeCHHHcccCCceEEEeeCCCccCCCcc
Confidence 6664444444445566666666666666654
No 401
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.30 E-value=2.4e-14 Score=159.43 Aligned_cols=159 Identities=14% Similarity=0.120 Sum_probs=79.6
Q ss_pred CCCCcEEEecCCcccCCCC-Cc----C-CCCCCCEEeccCcccCCccccccc-cccccceEEccCCcCCCCCC---cccc
Q 002063 120 CSNLKVLNVTGNAMVGSVP-DL----S-ALKNLEIFDLSINYFTGRFPRWVV-NLTQLVSLSIGDNVYDEAEI---PESI 189 (973)
Q Consensus 120 l~~L~~L~L~~n~l~~~~~-~l----~-~l~~L~~L~Ls~n~l~~~~~~~~~-~l~~L~~L~l~~n~l~~~~i---p~~~ 189 (973)
+++|++|+|++|.++.... .+ . ..++|++|||++|.+++.....+. .+++|++|+|++|.++.... ...+
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 3567777777777754321 12 1 225777777777777644333333 35566666666666643211 1111
Q ss_pred -cCCCCCCEEEcccccCCCC----CChhhhccCCCCeeecccccccccc----chhhhccccccEEEeecccCCCCC---
Q 002063 190 -GNLKNLTYLFLAHCNLRGR----IPESISELRELGTLDICRNKISGEF----PRSIRKLQKLWKIELYANNLTGEL--- 257 (973)
Q Consensus 190 -~~l~~L~~L~L~~n~l~~~----~p~~l~~l~~L~~L~L~~n~l~~~~----p~~l~~l~~L~~L~L~~n~l~~~~--- 257 (973)
...++|++|+|++|.++.. ++..+..+++|++|+|++|+|++.. +..+...++|++|+|++|.|++..
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~ 230 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALA 230 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHH
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHH
Confidence 2345566666666665531 2233345555666666666655322 333444445555555555554211
Q ss_pred -CccccccccccEEEeeccccc
Q 002063 258 -PAELGNLTLLQEFDISSNQMY 278 (973)
Q Consensus 258 -~~~l~~l~~L~~L~Ls~N~l~ 278 (973)
...+...++|++|+|++|.++
T Consensus 231 l~~~L~~~~~L~~L~Ls~N~i~ 252 (372)
T 3un9_A 231 LARAAREHPSLELLHLYFNELS 252 (372)
T ss_dssp HHHHHHHCSSCCEEECTTSSCC
T ss_pred HHHHHHhCCCCCEEeccCCCCC
Confidence 122223344444444444444
No 402
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.28 E-value=4.3e-14 Score=157.42 Aligned_cols=167 Identities=20% Similarity=0.216 Sum_probs=111.4
Q ss_pred CCCCcEEeCCCCcccCccCccccCC-----CCCcEEEecCCcccCCC-CC-cCCCCCCCEEeccCcccCCccccccc---
Q 002063 96 LQSLTVLSLPFNVLSGKLPLELSNC-----SNLKVLNVTGNAMVGSV-PD-LSALKNLEIFDLSINYFTGRFPRWVV--- 165 (973)
Q Consensus 96 l~~L~~L~Ls~n~l~~~~p~~l~~l-----~~L~~L~L~~n~l~~~~-~~-l~~l~~L~~L~Ls~n~l~~~~~~~~~--- 165 (973)
+++|++|+|++|.++......|... ++|++|+|++|.+.... .. ...+++|+.|+|++|.+++.....++
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 3567777777777765433333322 57777777777764321 12 23456778888888877755544443
Q ss_pred --cccccceEEccCCcCCCC---CCcccccCCCCCCEEEcccccCCCC----CChhhhccCCCCeeeccccccccc----
Q 002063 166 --NLTQLVSLSIGDNVYDEA---EIPESIGNLKNLTYLFLAHCNLRGR----IPESISELRELGTLDICRNKISGE---- 232 (973)
Q Consensus 166 --~l~~L~~L~l~~n~l~~~---~ip~~~~~l~~L~~L~L~~n~l~~~----~p~~l~~l~~L~~L~L~~n~l~~~---- 232 (973)
..++|++|+|++|.++.. .++..+..+++|++|+|++|.|++. ++..+...++|++|+|++|.|+..
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~ 230 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALA 230 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHH
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHH
Confidence 356788888888877542 2344557788888999998888753 245667778899999999998754
Q ss_pred cchhhhccccccEEEeecccCCCCCCcccc
Q 002063 233 FPRSIRKLQKLWKIELYANNLTGELPAELG 262 (973)
Q Consensus 233 ~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~ 262 (973)
++..+...++|++|+|++|.|++.....+.
T Consensus 231 l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~ 260 (372)
T 3un9_A 231 LARAAREHPSLELLHLYFNELSSEGRQVLR 260 (372)
T ss_dssp HHHHHHHCSSCCEEECTTSSCCHHHHHHHH
T ss_pred HHHHHHhCCCCCEEeccCCCCCHHHHHHHH
Confidence 344555678899999999998854444443
No 403
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.26 E-value=4.2e-12 Score=140.83 Aligned_cols=131 Identities=24% Similarity=0.223 Sum_probs=95.5
Q ss_pred EEEcccC-CCCCCCChhhhcCCCCCEEecCC-CcCCCCccccccccccCCEEEccCcccccCCCccccCccccchhhccc
Q 002063 437 QLVLQNN-RFSGELPSELGRLTNLERLILTN-NNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLAR 514 (973)
Q Consensus 437 ~L~L~~N-~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 514 (973)
.++++++ +|+ .+|. +..+++|+.|+|++ |+|++..+..|.++++|+.|+|++|+|++.+|..|.++++|+.|+|++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4577776 777 4666 88888888888885 888877777888888888888888888888888888888888888888
Q ss_pred cccccCCCccccccCCCCeeecCCCccCCCCC-chhhcc-cCceEEccCCccccccCc
Q 002063 515 NSLSGNIPRSLSLLSSLNALNLSGNKLTGSIP-DNLMKL-KLSSIDLSENQLSGSVPL 570 (973)
Q Consensus 515 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l-~L~~l~ls~N~l~~~~p~ 570 (973)
|+|++..+..|..++ |+.|+|++|++..... .++..+ ......+..++++|..|.
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~~~~~~~~~~~~~l~~~~~~C~~~~ 146 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQG 146 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCCSSSS
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCccCCCccHHHHHHHHhCcccccccCCCCCCCh
Confidence 888866666666665 8999999998884332 122222 133334456777777665
No 404
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.23 E-value=4e-10 Score=127.09 Aligned_cols=110 Identities=14% Similarity=0.250 Sum_probs=59.6
Q ss_pred CcccCccccceEecccccccccCCccccCCCCcceEeccCCcCCCCCCCccCCCCCCCEEEcccCCCCCCCChhhhcCCC
Q 002063 379 NSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTN 458 (973)
Q Consensus 379 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~ 458 (973)
.+|.++..|+.+.+.++..+ +...+|.+.+.|+.+.+. +.++.+....|..+.+|+.++|..+ ++.....+|.++.+
T Consensus 259 ~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~ 335 (394)
T 4gt6_A 259 HAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQ 335 (394)
T ss_dssp TTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTT
T ss_pred ceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCC
Confidence 45666667777766655443 455556666666666664 3444455555555556666655543 44334445555555
Q ss_pred CCEEecCCCcCCCCccccccccccCCEEEccCcc
Q 002063 459 LERLILTNNNFSGKIPSALGALRQLSSLHLEENA 492 (973)
Q Consensus 459 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 492 (973)
|+.+.|..+ ++.+-..+|.++++|+.+++.+|.
T Consensus 336 L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~ 368 (394)
T 4gt6_A 336 LERIAIPSS-VTKIPESAFSNCTALNNIEYSGSR 368 (394)
T ss_dssp CCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCH
T ss_pred CCEEEECcc-cCEEhHhHhhCCCCCCEEEECCce
Confidence 555555433 443334455555555555555544
No 405
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.19 E-value=2.9e-10 Score=128.24 Aligned_cols=335 Identities=11% Similarity=0.088 Sum_probs=175.4
Q ss_pred CCcccccccccc-ccceEEccCCcCCCCCCcccccCCCCCCEEEccccc---CCCCCChhhhccCCCCeeeccccccccc
Q 002063 157 TGRFPRWVVNLT-QLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCN---LRGRIPESISELRELGTLDICRNKISGE 232 (973)
Q Consensus 157 ~~~~~~~~~~l~-~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~---l~~~~p~~l~~l~~L~~L~L~~n~l~~~ 232 (973)
+.+...+|.+.. .|+.+.+..+ ++.++ ...|.++++|+.+.+..|. ++.....+|..+.+|+.+.+..+ ++..
T Consensus 52 t~Ig~~aF~~~~~~L~sI~iP~s-vt~Ig-~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I 128 (394)
T 4gt6_A 52 SKIGDRVFCNYKYVLTSVQIPDT-VTEIG-SNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEI 128 (394)
T ss_dssp EEECTTTTTTCCSCCCEEEECTT-CCEEC-TTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEE
T ss_pred eEcCHhhccCCCCcCEEEEECCC-eeEEh-HHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-ccee
Confidence 335556777764 5888888665 32221 2457778888888887764 55444566777777777766554 3334
Q ss_pred cchhhhccccccEEEeecccCCCCCCccccccccccEEEeeccccccccCCccCCCCCccEEEcccCCCCCCCCCCcCCc
Q 002063 233 FPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQCFKNNFSGEFPSGFGDM 312 (973)
Q Consensus 233 ~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l 312 (973)
...+|..+.+|+.+.+..+ +.......|.++.+|+.+.+..+ +.......|. ..+|+.+.+..+- ......+|..+
T Consensus 129 ~~~aF~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~-~~~l~~i~ip~~~-~~i~~~af~~c 204 (394)
T 4gt6_A 129 DSEAFHHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFT-GTALTQIHIPAKV-TRIGTNAFSEC 204 (394)
T ss_dssp CTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTT-TCCCSEEEECTTC-CEECTTTTTTC
T ss_pred hhhhhhhhcccccccccce-eeeecccceecccccccccccce-eeEecccccc-ccceeEEEECCcc-cccccchhhhc
Confidence 4456666777777776543 23244455666677777766554 3323333333 2456665554332 22333445555
Q ss_pred cccceeeccccccCCCCCccccccccccccccccccccccCChhhhhhhhHHHHHhhhccCCCCCCCcccCccccceEec
Q 002063 313 RKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSGEVPNSYADCKTIQRLRI 392 (973)
Q Consensus 313 ~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~nn~~~~~p~~~~~l~~L~~L~L 392 (973)
.++.......+.... ....+... +... ......+.....+..+.+
T Consensus 205 ~~l~~~~~~~~~~~~-~~~~~~~~----------~~~~------------------------~~~~~~~~~~~~~~~~~i 249 (394)
T 4gt6_A 205 FALSTITSDSESYPA-IDNVLYEK----------SANG------------------------DYALIRYPSQREDPAFKI 249 (394)
T ss_dssp TTCCEEEECCSSSCB-SSSCEEEE----------CTTS------------------------CEEEEECCTTCCCSEEEC
T ss_pred cccceeccccccccc-ccceeecc----------cccc------------------------cccccccccccccceEEc
Confidence 555444443332221 00000000 0000 000001112233344444
Q ss_pred ccccccccCCccccCCCCcceEeccCCcCCCCCCCccCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEecCCCcCCCC
Q 002063 393 SDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILTNNNFSGK 472 (973)
Q Consensus 393 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 472 (973)
.. .++.+...+|.+...|+.+.+.++. ..+....|..+++|+.+.+. +.++......|.++.+|+.++|..+ ++.+
T Consensus 250 p~-~v~~i~~~aF~~c~~L~~i~lp~~~-~~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I 325 (394)
T 4gt6_A 250 PN-GVARIETHAFDSCAYLASVKMPDSV-VSIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQI 325 (394)
T ss_dssp CT-TEEEECTTTTTTCSSCCEEECCTTC-CEECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEE
T ss_pred CC-cceEcccceeeecccccEEeccccc-ceecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEe
Confidence 32 2333455677777777777776543 33555566677777777775 3455455566777777777777654 4434
Q ss_pred ccccccccccCCEEEccCcccccCCCccccCccccchhhccccccccCCCccccccCCCCeeecCCCcc
Q 002063 473 IPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGNKL 541 (973)
Q Consensus 473 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 541 (973)
-..+|.++.+|+.+.+..+ ++..-..+|.++.+|+.+++.+|.... ..+....+|+.+.+..|.+
T Consensus 326 ~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 326 LDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp CTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC----------
T ss_pred hHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCCE
Confidence 4556777777777777544 554445667777777777776665431 3455566666666665544
No 406
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=99.14 E-value=1.6e-11 Score=135.28 Aligned_cols=181 Identities=17% Similarity=0.164 Sum_probs=106.0
Q ss_pred CCceEEEeecCCCCCc-c-------ccccccCCCCCcEEeCCCCccc---------CccCccccCCCCCcEEEecCCccc
Q 002063 72 TGRVTEISFDNKSLSG-E-------ISSSISALQSLTVLSLPFNVLS---------GKLPLELSNCSNLKVLNVTGNAMV 134 (973)
Q Consensus 72 ~~~v~~l~l~~~~l~~-~-------~~~~l~~l~~L~~L~Ls~n~l~---------~~~p~~l~~l~~L~~L~L~~n~l~ 134 (973)
..+|++|.+...+..| . +.+++..+++|+.|.+..+... +.+...+..+++|+.|+|++|.-.
T Consensus 106 ~~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l 185 (362)
T 2ra8_A 106 LPSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL 185 (362)
T ss_dssp GGGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC
T ss_pred chhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc
Confidence 4578899988766663 2 2445677899999999765431 124455677889999999887322
Q ss_pred CCCCCcCCCCCCCEEeccCcccCCccccccc--cccccceEEccC--CcCC-CC---CCcccc--cCCCCCCEEEccccc
Q 002063 135 GSVPDLSALKNLEIFDLSINYFTGRFPRWVV--NLTQLVSLSIGD--NVYD-EA---EIPESI--GNLKNLTYLFLAHCN 204 (973)
Q Consensus 135 ~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~--~l~~L~~L~l~~--n~l~-~~---~ip~~~--~~l~~L~~L~L~~n~ 204 (973)
..+ .+. +++|+.|+|..|.+.......+. .+++|++|+|+. |... .. .+...+ ..+++|++|+|++|.
T Consensus 186 ~l~-~~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~ 263 (362)
T 2ra8_A 186 SIG-KKP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAE 263 (362)
T ss_dssp BCC-SCB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCT
T ss_pred eec-ccc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCC
Confidence 222 243 78888888888887655444454 678888887753 2111 10 111122 235666666666666
Q ss_pred CCCCCChhhh---ccCCCCeeecccccccccc----chhhhccccccEEEeecccCC
Q 002063 205 LRGRIPESIS---ELRELGTLDICRNKISGEF----PRSIRKLQKLWKIELYANNLT 254 (973)
Q Consensus 205 l~~~~p~~l~---~l~~L~~L~L~~n~l~~~~----p~~l~~l~~L~~L~L~~n~l~ 254 (973)
+++..+..+. .+++|++|+|+.|.|++.. +..+..+++|+.|+|++|.|+
T Consensus 264 i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 264 EQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp THHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred CchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 6543333332 3455666666666655432 222334455555555555554
No 407
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.09 E-value=2.2e-10 Score=121.47 Aligned_cols=143 Identities=17% Similarity=0.057 Sum_probs=111.0
Q ss_pred HHhcCCcccCeecccCcEEEEEEEEcCCCceEEEEEeecc--ccHHHHHHHHHHHHhcC-CCceeeEeEEEEeCCeeEEE
Q 002063 673 EQICNLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG--DGVKVFAAEMEILGKIR-HRNILKLYACLLKGGSSFLV 749 (973)
Q Consensus 673 ~~~~~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lv 749 (973)
..+..|++...++.|+.+.||++... ++.+++|+.... .....+.+|+++++.+. +..+.++++++..++..|+|
T Consensus 11 ~~l~~~~~~~~~~g~s~~~v~~~~~~--~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv 88 (263)
T 3tm0_A 11 KLIEKYRCVKDTEGMSPAKVYKLVGE--NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLL 88 (263)
T ss_dssp HHHTTSEEEECCSCCSSSEEEEEECS--SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEE
T ss_pred HHhccceeEeeccCCCCCeEEEEECC--CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEE
Confidence 34567888888899999999999754 678999987642 33446889999999984 67788899999888899999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhc----------------------------------
Q 002063 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHD---------------------------------- 795 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~---------------------------------- 795 (973)
|||++|.++.+... +......++.+++++++.||+-
T Consensus 89 ~e~i~G~~l~~~~~----------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (263)
T 3tm0_A 89 MSEADGVLCSEEYE----------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENW 158 (263)
T ss_dssp EECCSSEEHHHHCC----------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGG
T ss_pred EEecCCeehhhccC----------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccc
Confidence 99999999876521 0112236778899999999961
Q ss_pred ----------------------CCCCeEecCCCCCCeeecCCCceEEecccCCc
Q 002063 796 ----------------------CSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 796 ----------------------~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
....++|+|++|.||++++++.+.|.||+.+.
T Consensus 159 ~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 159 EEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp STTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred cccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 01458999999999999876556799999764
No 408
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.96 E-value=9.6e-10 Score=116.34 Aligned_cols=136 Identities=17% Similarity=0.180 Sum_probs=96.3
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHhcCCCc--eeeEeEEEEeCCeeEEEEEccC
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRN--ILKLYACLLKGGSSFLVLEYMP 754 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hpn--iv~l~~~~~~~~~~~lv~e~~~ 754 (973)
.+.+....+.|..+.||++... +|+.+++|+.... ....+.+|+++++.+.+.+ +.+++++...++..++||||++
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~-~g~~~vlK~~~~~-~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~ 98 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQ-GRPVLFVKTDLSG-ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVP 98 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECT-TSCCEEEEEECSC-TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCS
T ss_pred CCceEecccCCCCceEEEEecC-CCCeEEEEeCCcc-cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecC
Confidence 4444333345666999999754 4678999986554 3345788999999986544 4558888887788999999999
Q ss_pred CCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcC--------------------------------------
Q 002063 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDC-------------------------------------- 796 (973)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~-------------------------------------- 796 (973)
|.++. .. ..+ ...++.++++.++.+|+..
T Consensus 99 G~~l~--~~--------~~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (264)
T 1nd4_A 99 GQDLL--SS--------HLA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGL 165 (264)
T ss_dssp SEETT--TS--------CCC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTC
T ss_pred CcccC--cC--------cCC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCc
Confidence 98874 11 011 1245666777777777421
Q ss_pred -----------------CCCeEecCCCCCCeeecCCCceEEecccCCc
Q 002063 797 -----------------SPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 797 -----------------~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
...++|+|++|.||++++++.+.|.||+.+.
T Consensus 166 ~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 166 APAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp CHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred cHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1239999999999999877667799999865
No 409
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.94 E-value=2.7e-08 Score=111.45 Aligned_cols=130 Identities=15% Similarity=0.185 Sum_probs=59.9
Q ss_pred cccCccccceEecccccccccCCccccCCCCcceEeccCCcCCCCCCCccCCCCCCCEEEcccCCCCCCCChhhhcCCCC
Q 002063 380 SYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNL 459 (973)
Q Consensus 380 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L 459 (973)
.+..+..|+.+.+..+ +.......|.+...|+.+.+..+ ++.+....|..+.+|+.+.+..+ +.......|.++.+|
T Consensus 212 ~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L 288 (379)
T 4h09_A 212 GFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNL 288 (379)
T ss_dssp TTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTC
T ss_pred ccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccccc
Confidence 3444555555555443 22234444555555555555443 44344444445555555555332 332333444455555
Q ss_pred CEEecCCCcCCCCccccccccccCCEEEccCcccccCCCccccCccccchhhcc
Q 002063 460 ERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCARIVDLNLA 513 (973)
Q Consensus 460 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 513 (973)
+.+.+.++.++.+...+|.++.+|+.+.|..+ ++..-..+|.++.+|+.+.+.
T Consensus 289 ~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip 341 (379)
T 4h09_A 289 TKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYP 341 (379)
T ss_dssp CEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCC
T ss_pred ccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEEC
Confidence 55555555444333444555555555555432 333333444444444444443
No 410
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.92 E-value=4.4e-08 Score=109.69 Aligned_cols=318 Identities=10% Similarity=0.025 Sum_probs=180.6
Q ss_pred CCCcCCCCCCCEEeccCcccCCccccccccccccceEEccCCcCCCCCCc-ccccCCCCCCEEEcccccCCCCCChhhhc
Q 002063 137 VPDLSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIP-ESIGNLKNLTYLFLAHCNLRGRIPESISE 215 (973)
Q Consensus 137 ~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip-~~~~~l~~L~~L~L~~n~l~~~~p~~l~~ 215 (973)
.|.+....+|+.+.+.. .++.+...+|.++++|+.+.|..+ ++ .|+ ..|.++ +|+.+.+..+ ++.....+|..
T Consensus 39 ~~~~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~--~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~ 112 (379)
T 4h09_A 39 IPWYKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VT--SIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG 112 (379)
T ss_dssp STTGGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CC--EECTTTTTTC-CCCEEEECTT-CCEECTTTTTT
T ss_pred ccccccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ce--EechhhhcCC-CCceEECCce-eeEeccceecc
Confidence 34456667788887764 355566677888888888887654 32 222 234444 5666665433 33233334443
Q ss_pred cCCCCeeeccccccccccchhhhccccccEEEeecccCCCCCCccccccccccEEEeeccccccccCCccCCCCCccEEE
Q 002063 216 LRELGTLDICRNKISGEFPRSIRKLQKLWKIELYANNLTGELPAELGNLTLLQEFDISSNQMYGKLPEEIGNLKNLTVFQ 295 (973)
Q Consensus 216 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 295 (973)
.+|+.+.+..+-.. .....|.. .+|+.+.+..+ ++......|..+.+++...+..+.........+..
T Consensus 113 -~~L~~i~lp~~~~~-i~~~~F~~-~~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~-------- 180 (379)
T 4h09_A 113 -TDLDDFEFPGATTE-IGNYIFYN-SSVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLY-------- 180 (379)
T ss_dssp -CCCSEEECCTTCCE-ECTTTTTT-CCCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEE--------
T ss_pred -CCcccccCCCcccc-cccccccc-ceeeeeeccce-eeccccchhcccccccccccccccceeecccceec--------
Confidence 36777766554221 22223333 24555444432 23233444555666666655544322111000000
Q ss_pred cccCCCCCCCCCCcCCccccceeeccccccCCCCCccccccccccccccccccccccCChhhhhhhhHHHHHhhhccCCC
Q 002063 296 CFKNNFSGEFPSGFGDMRKLFAFSIYGNRFSGPFPENLGRYTALTDVDISENQFSGSFPKYLCEKRKLLNLLALSNNFSG 375 (973)
Q Consensus 296 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ll~ll~l~nn~~~ 375 (973)
+. .......+.....+..+.+..+.- ......+....+|+.+.+..+-- .
T Consensus 181 ---~~-~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~f~~~~~l~~i~~~~~~~-------------------------~ 230 (379)
T 4h09_A 181 ---NK-NKTILESYPAAKTGTEFTIPSTVK-TVTAYGFSYGKNLKKITITSGVT-------------------------T 230 (379)
T ss_dssp ---ET-TSSEEEECCTTCCCSEEECCTTCC-EECTTTTTTCSSCSEEECCTTCC-------------------------E
T ss_pred ---cc-ccceecccccccccccccccccee-EEeecccccccccceeeecccee-------------------------E
Confidence 00 001111222233333333322211 12333444555555555543311 1
Q ss_pred CCCCcccCccccceEecccccccccCCccccCCCCcceEeccCCcCCCCCCCccCCCCCCCEEEcccCCCCCCCChhhhc
Q 002063 376 EVPNSYADCKTIQRLRISDNHLSGKIPDGLWALPNVGMLDFGDNDFTGGISPLIGLSTSLSQLVLQNNRFSGELPSELGR 455 (973)
Q Consensus 376 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~ 455 (973)
.....|.++..|+.+.+..+ ++.+...+|.+..+|+.+.+..+ +..+....|..+++|+.+.+.++.++......|.+
T Consensus 231 i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~ 308 (379)
T 4h09_A 231 LGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMD 308 (379)
T ss_dssp ECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTT
T ss_pred EccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcC
Confidence 22345677788888888776 55566777888888888888643 66666777888889999999888888667788889
Q ss_pred CCCCCEEecCCCcCCCCccccccccccCCEEEccCcccccCCCccccCccc
Q 002063 456 LTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALTGSIPNEMGDCAR 506 (973)
Q Consensus 456 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 506 (973)
+.+|+.+.|..+ ++.+-..+|.++.+|+.+.+..+ ++..-..+|.++..
T Consensus 309 c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c~~ 357 (379)
T 4h09_A 309 CVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFEGSSI 357 (379)
T ss_dssp CTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTSSC
T ss_pred CCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhhCCCC
Confidence 999999999754 66455678899999999988765 65555667776643
No 411
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.89 E-value=6.3e-10 Score=122.58 Aligned_cols=137 Identities=16% Similarity=0.144 Sum_probs=62.9
Q ss_pred ccccCCCCCCEEEcccccCCCCCChhhhccCCCCeeeccccccccccchhhh--ccccccEEEeec--ccCCCC-----C
Q 002063 187 ESIGNLKNLTYLFLAHCNLRGRIPESISELRELGTLDICRNKISGEFPRSIR--KLQKLWKIELYA--NNLTGE-----L 257 (973)
Q Consensus 187 ~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~--~l~~L~~L~L~~--n~l~~~-----~ 257 (973)
..+..+++|+.|+|++|.-. .++. + .+++|++|+|..|.++......+. .+++|+.|+|+. |...+. +
T Consensus 166 ~ll~~~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l 242 (362)
T 2ra8_A 166 PVLDAMPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVF 242 (362)
T ss_dssp HHHHTCTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGT
T ss_pred HHHhcCCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHH
Confidence 33444555555555554211 1121 2 245566666655555433333333 455666665542 111111 0
Q ss_pred Cccc--cccccccEEEeeccccccccCCccC---CCCCccEEEcccCCCCCC----CCCCcCCccccceeeccccccC
Q 002063 258 PAEL--GNLTLLQEFDISSNQMYGKLPEEIG---NLKNLTVFQCFKNNFSGE----FPSGFGDMRKLFAFSIYGNRFS 326 (973)
Q Consensus 258 ~~~l--~~l~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~ 326 (973)
...+ ..+++|+.|+|++|.+.+..+..+. .+++|+.|+|+.|.+.+. ++..+..+++|+.|++++|.++
T Consensus 243 ~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 243 RPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp GGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred HHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 0111 2355666666666665533222221 345566666666665542 2223334555555666555554
No 412
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.88 E-value=3.1e-11 Score=125.92 Aligned_cols=161 Identities=17% Similarity=0.200 Sum_probs=80.0
Q ss_pred CCCcceeeeCCCCCceEEEeecC---CCCCccccc-cccCCCCCcEEeCCCCcccCccCc-cccCCCCCcE--EEecCCc
Q 002063 60 PCGFSGITCDSVTGRVTEISFDN---KSLSGEISS-SISALQSLTVLSLPFNVLSGKLPL-ELSNCSNLKV--LNVTGNA 132 (973)
Q Consensus 60 ~c~w~gv~C~~~~~~v~~l~l~~---~~l~~~~~~-~l~~l~~L~~L~Ls~n~l~~~~p~-~l~~l~~L~~--L~L~~n~ 132 (973)
.|.|.|+.|+....+|+.+...+ ..+.|.+.+ .+..++. .|..++|.-++.+.- .|...+.|+. ++++.|.
T Consensus 77 l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~ 154 (267)
T 3rw6_A 77 LKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNR 154 (267)
T ss_dssp HHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTS
T ss_pred HHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCCH
Confidence 48899999997666887776655 344455532 3333333 233333333322221 1333334443 4444443
Q ss_pred ccCCCC---C-cCCCCCCCEEeccCcccCCccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEcccccCCCC
Q 002063 133 MVGSVP---D-LSALKNLEIFDLSINYFTGRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCNLRGR 208 (973)
Q Consensus 133 l~~~~~---~-l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~l~~~ 208 (973)
...... . ..++++|+.|+|++|.+++.. .+|..+..+++|++|+|++|+|++.
T Consensus 155 ~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~-----------------------~l~~~~~~l~~L~~L~Ls~N~i~~~ 211 (267)
T 3rw6_A 155 RSCMAATLRIIEENIPELLSLNLSNNRLYRLD-----------------------DMSSIVQKAPNLKILNLSGNELKSE 211 (267)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEECTTSCCCCCG-----------------------GGTTHHHHSTTCCEEECTTSCCCSG
T ss_pred HHHHHHHHHHHHhhCCCCCEEECCCCCCCCCc-----------------------cchhHHhhCCCCCEEECCCCccCCc
Confidence 221111 0 123455555555555555311 1334444555566666666665543
Q ss_pred CChhhhccC--CCCeeeccccccccccc-------hhhhccccccEEE
Q 002063 209 IPESISELR--ELGTLDICRNKISGEFP-------RSIRKLQKLWKIE 247 (973)
Q Consensus 209 ~p~~l~~l~--~L~~L~L~~n~l~~~~p-------~~l~~l~~L~~L~ 247 (973)
..+..++ +|++|+|++|.+.+.+| ..+..+++|+.||
T Consensus 212 --~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 212 --RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp --GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred --hhhhhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 2333343 66666666666665444 2355667776654
No 413
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.82 E-value=3.2e-09 Score=115.04 Aligned_cols=188 Identities=21% Similarity=0.183 Sum_probs=118.8
Q ss_pred cCeecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHhcC-CCc--eeeEeEEEEeCC---eeEEEEEccC
Q 002063 681 DNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIR-HRN--ILKLYACLLKGG---SSFLVLEYMP 754 (973)
Q Consensus 681 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~-hpn--iv~l~~~~~~~~---~~~lv~e~~~ 754 (973)
.+.++.|....||++. ..+++|+.........+.+|+++++.+. +.. +.+++.....+. ..|+||||++
T Consensus 25 i~~~~~G~~n~v~~v~-----~~~vlR~~~~~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~ 99 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN-----RDFIFKFPKHSRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIK 99 (304)
T ss_dssp CCEEEECSSEEEEEST-----TSEEEEEESSHHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCC
T ss_pred eEecCCCCcceEEEEC-----CEEEEEecCCcchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccC
Confidence 4568999999999863 4689998665545677899999999883 333 233444332322 3489999999
Q ss_pred CCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhc---------------------------------------
Q 002063 755 NGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHD--------------------------------------- 795 (973)
Q Consensus 755 ~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~--------------------------------------- 795 (973)
|.++.+.... .++..++..++.++++.++.||+-
T Consensus 100 G~~l~~~~~~-------~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (304)
T 3sg8_A 100 GVPLTPLLLN-------NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKK 172 (304)
T ss_dssp CEECCHHHHH-------TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHH
T ss_pred CeECCccccc-------cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHH
Confidence 9888754321 245555666667777776666641
Q ss_pred ----------------CCCCeEecCCCCCCeeecC--CCceEEecccCCccccCCCCccccccc---Cc---------cc
Q 002063 796 ----------------CSPPIIHRDIKSSNILLDE--DYEPKIADFGVAKIAENSPKVSDYSCF---AG---------TH 845 (973)
Q Consensus 796 ----------------~~~~ivH~Dlkp~Nill~~--~~~~kl~Dfgl~~~~~~~~~~~~~~~~---~g---------t~ 845 (973)
....++|+|++|.||++++ +..+.+.||+.+..-.+.......... .+ ..
T Consensus 173 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y 252 (304)
T 3sg8_A 173 VDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHY 252 (304)
T ss_dssp HHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHc
Confidence 1235899999999999998 456789999988643221110000000 00 00
Q ss_pred cccc-ccccccCCCCccchHHHHHHHHHHHHhCCCCCC
Q 002063 846 GYIA-PELAYTCKVSEKSDVFSFGVVLLELVTGRKPVE 882 (973)
Q Consensus 846 ~y~a-PE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~ 882 (973)
++.. |+.... .....+.|++|.++|.+.+|..+|-
T Consensus 253 ~~~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 253 KHKDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp TCSCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred CCCCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 1111 222111 1123689999999999999987763
No 414
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.78 E-value=1.3e-08 Score=113.13 Aligned_cols=140 Identities=16% Similarity=0.271 Sum_probs=104.4
Q ss_pred ccCeecccCcEEEEEEEEcCCCceEEEEEee--cc---ccHHHHHHHHHHHHhcC--CCceeeEeEEEEeC---CeeEEE
Q 002063 680 EDNLIGSGGTGKVYRLDLKKNAGTVAVKQLW--KG---DGVKVFAAEMEILGKIR--HRNILKLYACLLKG---GSSFLV 749 (973)
Q Consensus 680 ~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~--~~---~~~~~~~~E~~~l~~l~--hpniv~l~~~~~~~---~~~~lv 749 (973)
..+.++.|.++.||++... +..+++|+.. .. .....+.+|+++++.+. +..+.+++.++.+. +..|+|
T Consensus 42 ~~~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~v 119 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYI 119 (359)
T ss_dssp EEEECCC-CCSCEEEEECS--SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEE
T ss_pred eEEEcCCcccceEEEEEEC--CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEE
Confidence 3467899999999998875 4688999775 32 22346788999999996 45577888887765 458999
Q ss_pred EEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcC---------------------------------
Q 002063 750 LEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDC--------------------------------- 796 (973)
Q Consensus 750 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~--------------------------------- 796 (973)
|||++|..+.+. ....++...+..++.+++++|+.||+..
T Consensus 120 me~v~G~~l~~~-------~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (359)
T 3dxp_A 120 MEFVSGRVLWDQ-------SLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETE 192 (359)
T ss_dssp EECCCCBCCCCT-------TCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCS
T ss_pred EEecCCeecCCC-------ccccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCc
Confidence 999998776431 1223567778888999999999999620
Q ss_pred ----------------------CCCeEecCCCCCCeeecCCCc--eEEecccCCcc
Q 002063 797 ----------------------SPPIIHRDIKSSNILLDEDYE--PKIADFGVAKI 828 (973)
Q Consensus 797 ----------------------~~~ivH~Dlkp~Nill~~~~~--~kl~Dfgl~~~ 828 (973)
...++|+|+++.||+++.++. +.|.||+.+..
T Consensus 193 ~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 193 SIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp CCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred CChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 256999999999999997753 68999998863
No 415
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.51 E-value=3.7e-07 Score=99.45 Aligned_cols=137 Identities=16% Similarity=0.218 Sum_probs=96.5
Q ss_pred CCcccCeecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHhcCC---C-ceeeEeEEEEeCCeeEEEEEc
Q 002063 677 NLEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRH---R-NILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 677 ~~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h---p-niv~l~~~~~~~~~~~lv~e~ 752 (973)
.+...+.++.|....||++ ++.+++|+.........+.+|.++++.+.+ + .+.+++++ +..|+||||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v-----g~~~vlR~~~~~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~ 108 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC-----NEQYVVKVPKRDSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKY 108 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE-----TTTEEEEEESSHHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEEC
T ss_pred ceEEEEeCCCCCCceEEEE-----CCEEEEEeCCcHHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEee
Confidence 4456678999999999998 567899977655545678999999998866 1 23344443 567899999
Q ss_pred cCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcC------------------------------------
Q 002063 753 MPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDC------------------------------------ 796 (973)
Q Consensus 753 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~------------------------------------ 796 (973)
++|.++.+.... .++..+...++.++++.++.||+..
T Consensus 109 i~G~~l~~~~~~-------~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (320)
T 3r70_A 109 IKGERITYEQYH-------KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLL 181 (320)
T ss_dssp CCCBCCCHHHHT-------TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCCccccccccc-------cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccc
Confidence 999888643211 1334444555555555555555321
Q ss_pred ------------------------CCCeEecCCCCCCeeecCCCceEEecccCCccc
Q 002063 797 ------------------------SPPIIHRDIKSSNILLDEDYEPKIADFGVAKIA 829 (973)
Q Consensus 797 ------------------------~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~ 829 (973)
...++|+|++|.||+++.++.+.+.||+.+..-
T Consensus 182 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 182 TDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp CHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred cccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 234699999999999999666799999988643
No 416
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.48 E-value=8.9e-09 Score=102.29 Aligned_cols=122 Identities=12% Similarity=0.094 Sum_probs=70.3
Q ss_pred cccccccCCCCCcEEeCCCC-cccCc----cCccccCCCCCcEEEecCCcccCC-----CCCcCCCCCCCEEeccCcccC
Q 002063 88 EISSSISALQSLTVLSLPFN-VLSGK----LPLELSNCSNLKVLNVTGNAMVGS-----VPDLSALKNLEIFDLSINYFT 157 (973)
Q Consensus 88 ~~~~~l~~l~~L~~L~Ls~n-~l~~~----~p~~l~~l~~L~~L~L~~n~l~~~-----~~~l~~l~~L~~L~Ls~n~l~ 157 (973)
.+...+...+.|++|+|++| .+... +...+...++|++|+|++|.+... ...+...++|++|+|++|.|.
T Consensus 27 ~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~ 106 (185)
T 1io0_A 27 TLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 106 (185)
T ss_dssp HHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCC
Confidence 34455666777777777777 66532 333455556666666666665321 111333345555555555554
Q ss_pred CccccccccccccceEEccCCcCCCCCCcccccCCCCCCEEEc--ccccCCCC----CChhhhccCCCCeeeccccccc
Q 002063 158 GRFPRWVVNLTQLVSLSIGDNVYDEAEIPESIGNLKNLTYLFL--AHCNLRGR----IPESISELRELGTLDICRNKIS 230 (973)
Q Consensus 158 ~~~~~~~~~l~~L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L--~~n~l~~~----~p~~l~~l~~L~~L~L~~n~l~ 230 (973)
+.... .+.+.+...++|++|+| ++|.++.. +...+...++|++|+|++|.+.
T Consensus 107 ~~g~~---------------------~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 107 GSGIL---------------------ALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHH---------------------HHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHH---------------------HHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 32111 12344555667777777 66777643 3344556688888888888886
No 417
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.36 E-value=7.9e-08 Score=95.37 Aligned_cols=62 Identities=21% Similarity=0.256 Sum_probs=27.8
Q ss_pred CCCCeeeccccccccc----cchhhhccccccEEEe--ecccCCCCC----CccccccccccEEEeeccccc
Q 002063 217 RELGTLDICRNKISGE----FPRSIRKLQKLWKIEL--YANNLTGEL----PAELGNLTLLQEFDISSNQMY 278 (973)
Q Consensus 217 ~~L~~L~L~~n~l~~~----~p~~l~~l~~L~~L~L--~~n~l~~~~----~~~l~~l~~L~~L~Ls~N~l~ 278 (973)
++|++|+|++|.|+.. +...+...++|++|+| ++|.|+... ...+...++|++|+|++|.+.
T Consensus 93 ~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 93 NTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp SSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred CCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 4444444444444322 2233334444555555 445444221 122333455666666666553
No 418
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.33 E-value=1e-07 Score=99.38 Aligned_cols=80 Identities=24% Similarity=0.292 Sum_probs=39.5
Q ss_pred hcCCCCCEEecCCCcCCC--CccccccccccCCEEEccCcccccCCCccccCcc--ccchhhccccccccCCC-------
Q 002063 454 GRLTNLERLILTNNNFSG--KIPSALGALRQLSSLHLEENALTGSIPNEMGDCA--RIVDLNLARNSLSGNIP------- 522 (973)
Q Consensus 454 ~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~Ls~N~l~~~~p------- 522 (973)
.++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+.+.+|
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 345566666666666655 2334455566666666666666543 2222222 44444444444444333
Q ss_pred ccccccCCCCeee
Q 002063 523 RSLSLLSSLNALN 535 (973)
Q Consensus 523 ~~~~~l~~L~~L~ 535 (973)
..+..+++|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 1244555555544
No 419
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.30 E-value=3.5e-06 Score=89.25 Aligned_cols=135 Identities=21% Similarity=0.165 Sum_probs=94.4
Q ss_pred eecccCcE-EEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHhcC-CCceeeEeEEEEeCCeeEEEEEccCCCchHH
Q 002063 683 LIGSGGTG-KVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIR-HRNILKLYACLLKGGSSFLVLEYMPNGNLFQ 760 (973)
Q Consensus 683 ~lG~G~~g-~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lv~e~~~~gsL~~ 760 (973)
.+..|..| .||+......+..++||+-.. .....+.+|...++.+. +--+-++++++.+++..|+|||+++|.++.+
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~-~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~ 109 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKG-SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQ 109 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEET-HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCC-CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccccc
Confidence 34556555 699988877677899997543 34566889999998884 3335677888888899999999999988776
Q ss_pred HHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhc---------------------------------------------
Q 002063 761 ALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHD--------------------------------------------- 795 (973)
Q Consensus 761 ~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~--------------------------------------------- 795 (973)
..... ......++.+++..++.||+-
T Consensus 110 ~~~~~---------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (272)
T 4gkh_A 110 VLEEY---------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVW 180 (272)
T ss_dssp HHHHC---------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHH
T ss_pred cccCC---------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHH
Confidence 54321 011123344444455555421
Q ss_pred ----------CCCCeEecCCCCCCeeecCCCceEEecccCCc
Q 002063 796 ----------CSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 796 ----------~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
....++|+|+.+.||+++.++.+-|.||+.+.
T Consensus 181 ~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 181 KEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 01237899999999999987777799999775
No 420
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.27 E-value=4.6e-06 Score=89.95 Aligned_cols=75 Identities=15% Similarity=0.106 Sum_probs=56.4
Q ss_pred cCeecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHhcCCC---ceeeEeEEEE-eCCeeEEEEEccCCC
Q 002063 681 DNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHR---NILKLYACLL-KGGSSFLVLEYMPNG 756 (973)
Q Consensus 681 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hp---niv~l~~~~~-~~~~~~lv~e~~~~g 756 (973)
.+.++.|....||+. ++.++||+.........+.+|+++++.+.+. .+-+++.+.. ..+..++||||++|.
T Consensus 24 v~~l~~G~~n~v~~v-----g~~~VlR~~~~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~ 98 (306)
T 3tdw_A 24 VESLGEGFRNYAILV-----NGDWVFRFPKSQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQ 98 (306)
T ss_dssp EEEEEECSSEEEEEE-----TTTEEEEEESSHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSE
T ss_pred eeecCCCcceeEEEE-----CCEEEEEecCCchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCe
Confidence 356889999999988 5678999864444566789999999999652 2445566554 355678999999998
Q ss_pred chHH
Q 002063 757 NLFQ 760 (973)
Q Consensus 757 sL~~ 760 (973)
++.+
T Consensus 99 ~l~~ 102 (306)
T 3tdw_A 99 ILGE 102 (306)
T ss_dssp ECHH
T ss_pred ECch
Confidence 8865
No 421
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.10 E-value=1.2e-05 Score=85.54 Aligned_cols=74 Identities=18% Similarity=0.138 Sum_probs=57.8
Q ss_pred ccCeecccCcEEEEEEEEcCCCceEEEEEeecc--ccHHHHHHHHHHHHhcCCC---ceeeEeEEEEeCCeeEEEEEccC
Q 002063 680 EDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRHR---NILKLYACLLKGGSSFLVLEYMP 754 (973)
Q Consensus 680 ~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp---niv~l~~~~~~~~~~~lv~e~~~ 754 (973)
..+.|+.|.++.||++... +|+.++||+.... .....+.+|++.++.+.+. .+.+++++. ..++||||++
T Consensus 19 ~~~~l~gG~~n~vy~v~~~-dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~ 93 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELA-DGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVD 93 (288)
T ss_dssp EEEEEEEETTEEEEEEEET-TSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCC
T ss_pred ceeeeCCcchhheEEEEeC-CCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecc
Confidence 3567999999999999875 4788999985432 2346789999999999765 466777653 3689999999
Q ss_pred CCch
Q 002063 755 NGNL 758 (973)
Q Consensus 755 ~gsL 758 (973)
++++
T Consensus 94 g~~~ 97 (288)
T 3d1u_A 94 ERPP 97 (288)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 9875
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=97.92 E-value=4.6e-05 Score=84.01 Aligned_cols=76 Identities=7% Similarity=0.036 Sum_probs=56.3
Q ss_pred cccCeecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHhcCCCc--eeeEeEEEEeC-CeeEEEEEccCC
Q 002063 679 EEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRN--ILKLYACLLKG-GSSFLVLEYMPN 755 (973)
Q Consensus 679 ~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hpn--iv~l~~~~~~~-~~~~lv~e~~~~ 755 (973)
...+.++.|....+|+.... ++.+++|+.... ..+.+|+.+++.+.... +.+++.+.... +..|+||||++|
T Consensus 44 ~~i~~l~gG~~n~~y~v~~~--g~~~vlK~~~~~---~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G 118 (362)
T 3ovc_A 44 SDLMQLSEGEESRAFSFDVG--GRGYVLRVNSCA---DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQG 118 (362)
T ss_dssp EEEEEEEECSSEEEEEEEET--TEEEEEEEESCC---HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCS
T ss_pred ceEEECCCCCcceEEEEEEC--CcEEEEEeCCch---hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCC
Confidence 34567899999999998753 778999976443 25788999999886433 44566665554 668999999987
Q ss_pred CchH
Q 002063 756 GNLF 759 (973)
Q Consensus 756 gsL~ 759 (973)
.++.
T Consensus 119 ~~l~ 122 (362)
T 3ovc_A 119 VTLQ 122 (362)
T ss_dssp EETT
T ss_pred CCcc
Confidence 6653
No 423
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.86 E-value=6e-06 Score=79.53 Aligned_cols=82 Identities=11% Similarity=0.164 Sum_probs=37.3
Q ss_pred CCCEEEcccccCCCCCChhhhccCCCCeeeccccc-cccccchhhhcc----ccccEEEeeccc-CCCCCCccccccccc
Q 002063 194 NLTYLFLAHCNLRGRIPESISELRELGTLDICRNK-ISGEFPRSIRKL----QKLWKIELYANN-LTGELPAELGNLTLL 267 (973)
Q Consensus 194 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~-l~~~~p~~l~~l----~~L~~L~L~~n~-l~~~~~~~l~~l~~L 267 (973)
+|++|++++|.++...-..+..+++|++|+|++|. |++..-..++.+ ++|++|+|++|. |++..-..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 34555555555444333344445555555555552 443333333332 245555555542 443333334445555
Q ss_pred cEEEeecc
Q 002063 268 QEFDISSN 275 (973)
Q Consensus 268 ~~L~Ls~N 275 (973)
++|+|+++
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 55555544
No 424
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.84 E-value=7.9e-06 Score=78.72 Aligned_cols=82 Identities=12% Similarity=0.216 Sum_probs=45.9
Q ss_pred cceEEccCCcCCCCCCcccccCCCCCCEEEccccc-CCCCCChhhhcc----CCCCeeecccc-ccccccchhhhccccc
Q 002063 170 LVSLSIGDNVYDEAEIPESIGNLKNLTYLFLAHCN-LRGRIPESISEL----RELGTLDICRN-KISGEFPRSIRKLQKL 243 (973)
Q Consensus 170 L~~L~l~~n~l~~~~ip~~~~~l~~L~~L~L~~n~-l~~~~p~~l~~l----~~L~~L~L~~n-~l~~~~p~~l~~l~~L 243 (973)
|++|+++++.+++..+ ..+.++++|++|+|++|. +++..-..++.+ ++|++|+|++| +|+...-..+.++++|
T Consensus 63 L~~LDLs~~~Itd~GL-~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 63 IQAIDATDSCIMSIGF-DHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp EEEEEEESCCCCGGGG-GGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred EeEEeCcCCCccHHHH-HHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 4444444444333333 334556666666666664 554333334443 25777777776 3665555566677777
Q ss_pred cEEEeeccc
Q 002063 244 WKIELYANN 252 (973)
Q Consensus 244 ~~L~L~~n~ 252 (973)
++|+|+++.
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 777777764
No 425
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.75 E-value=0.00017 Score=79.01 Aligned_cols=142 Identities=17% Similarity=0.206 Sum_probs=81.5
Q ss_pred CeecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHhcC-----CCceeeEe-E--EEEeCCeeEEEEEcc
Q 002063 682 NLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIR-----HRNILKLY-A--CLLKGGSSFLVLEYM 753 (973)
Q Consensus 682 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~-----hpniv~l~-~--~~~~~~~~~lv~e~~ 753 (973)
+.|+.|..+.||++... +..+++|+.... ...+..|+.+++.+. .|.++... + +...++..++||||+
T Consensus 38 ~~l~gG~~n~~~~v~~~--~~~~vlk~~~~~--~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i 113 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTD--SGAVCLKRIHRP--EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWI 113 (346)
T ss_dssp EECC----CEEEEEEET--TEEEEEEEECSC--HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECC
T ss_pred eeccccccCcEEEEEeC--CCCEEEEecCCC--HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEee
Confidence 45666778999999875 346899987653 234455666666553 24444311 0 123467789999999
Q ss_pred CCCchH--------------HHHHhhhcCC--C-------CCcCHHHHH-------------------------------
Q 002063 754 PNGNLF--------------QALHKRVKEG--K-------PELDWFRRY------------------------------- 779 (973)
Q Consensus 754 ~~gsL~--------------~~l~~~~~~~--~-------~~~~~~~~~------------------------------- 779 (973)
+|.++. ..++...... . ....|....
T Consensus 114 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 193 (346)
T 2q83_A 114 EGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEID 193 (346)
T ss_dssp CCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred cCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHH
Confidence 986542 1122211110 0 011232210
Q ss_pred HHHHHHHHHHhHhhh----------cCCCCeEecCCCCCCeeecCCCceEEecccCCc
Q 002063 780 KIALGAAKGIAYLHH----------DCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 780 ~i~~~ia~~l~~LH~----------~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
.+..++..++++++. .....++|+|+++.||+++.++.+.+.||+.+.
T Consensus 194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 194 GFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 111123345666652 025789999999999999888899999999764
No 426
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.74 E-value=3.9e-05 Score=84.73 Aligned_cols=79 Identities=9% Similarity=0.155 Sum_probs=55.0
Q ss_pred cCee-cccCcEEEEEEEEc--C----CCceEEEEEeeccc-----cHHHHHHHHHHHHhcC-C--CceeeEeEEEEeC--
Q 002063 681 DNLI-GSGGTGKVYRLDLK--K----NAGTVAVKQLWKGD-----GVKVFAAEMEILGKIR-H--RNILKLYACLLKG-- 743 (973)
Q Consensus 681 ~~~l-G~G~~g~Vy~a~~~--~----~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~-h--pniv~l~~~~~~~-- 743 (973)
.+.| +.|....+|+.... . +++.+++|+..... ....+.+|+.+++.+. + ..+.+++.+..++
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3567 88999999988764 1 15678999765432 1245788999998884 3 3456677776554
Q ss_pred -CeeEEEEEccCCCchH
Q 002063 744 -GSSFLVLEYMPNGNLF 759 (973)
Q Consensus 744 -~~~~lv~e~~~~gsL~ 759 (973)
+..|+||||++|..+.
T Consensus 105 ~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp TSSCEEEEECCCCBCCC
T ss_pred cCCceEEEEecCCCChh
Confidence 3578999999886653
No 427
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.67 E-value=0.00016 Score=81.17 Aligned_cols=74 Identities=14% Similarity=0.139 Sum_probs=49.5
Q ss_pred cCeecccCcEEEEEEEEcCCCceEEEEEeecc---------ccHHHHHHHHHHHHhcCC--Ccee-eEeEEEEeCCeeEE
Q 002063 681 DNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG---------DGVKVFAAEMEILGKIRH--RNIL-KLYACLLKGGSSFL 748 (973)
Q Consensus 681 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~---------~~~~~~~~E~~~l~~l~h--pniv-~l~~~~~~~~~~~l 748 (973)
.+.+|.|..+.||++.....++.|+||..... ....++.+|.++++.+.. |..+ +++.+ +++..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 45789999999999987655778999975431 123456789999988742 4333 44443 4455689
Q ss_pred EEEccCCC
Q 002063 749 VLEYMPNG 756 (973)
Q Consensus 749 v~e~~~~g 756 (973)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999764
No 428
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.31 E-value=0.0047 Score=66.00 Aligned_cols=141 Identities=20% Similarity=0.241 Sum_probs=93.1
Q ss_pred ccCeecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHhcC---CCceeeEeEEEEeCCeeEEEEEccCCC
Q 002063 680 EDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIR---HRNILKLYACLLKGGSSFLVLEYMPNG 756 (973)
Q Consensus 680 ~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~---hpniv~l~~~~~~~~~~~lv~e~~~~g 756 (973)
..+.|+.|....+|+.... ++.++||+.... ....+.+|++.++.+. ...+.+++.+...++..++||||+++.
T Consensus 40 ~~~~l~gG~~n~~y~v~~~--~~~~vlK~~~~~-~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~ 116 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLINDE--VQTVFVKINERS-YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS 116 (312)
T ss_dssp EEEEECCSSSSEEEEEESS--SCEEEEEEEEGG-GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred eeEEeCCccceeeeEEEEC--CCeEEEEeCCcc-cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence 3467899999999998763 678899976543 4667889999998884 356778888888788899999999987
Q ss_pred chH--------H---HHHhhhcCC-----------------CCCcCHHHHH---HHHHH----------------HHHH-
Q 002063 757 NLF--------Q---ALHKRVKEG-----------------KPELDWFRRY---KIALG----------------AAKG- 788 (973)
Q Consensus 757 sL~--------~---~l~~~~~~~-----------------~~~~~~~~~~---~i~~~----------------ia~~- 788 (973)
.+. + .++...... ...-+|.... ++..+ ++..
T Consensus 117 ~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l 196 (312)
T 3jr1_A 117 KNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIV 196 (312)
T ss_dssp CCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 652 1 122211100 0112565432 11111 1111
Q ss_pred HhHhhh-cCCCCeEecCCCCCCeeecCCCceEEeccc
Q 002063 789 IAYLHH-DCSPPIIHRDIKSSNILLDEDYEPKIADFG 824 (973)
Q Consensus 789 l~~LH~-~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 824 (973)
...|.. .....++|+|+.+.|++++.++ +.|.|++
T Consensus 197 ~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 197 ADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 123321 1246799999999999999887 8899974
No 429
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.08 E-value=0.00019 Score=70.52 Aligned_cols=40 Identities=18% Similarity=0.275 Sum_probs=17.6
Q ss_pred cCCCCCcEEEecCC-cccCC-----CCCcCCCCCCCEEeccCcccC
Q 002063 118 SNCSNLKVLNVTGN-AMVGS-----VPDLSALKNLEIFDLSINYFT 157 (973)
Q Consensus 118 ~~l~~L~~L~L~~n-~l~~~-----~~~l~~l~~L~~L~Ls~n~l~ 157 (973)
.+-+.|++|+|++| .|... ...+..-+.|+.|+|++|.+.
T Consensus 38 ~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~ig 83 (197)
T 1pgv_A 38 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAIS 83 (197)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCB
T ss_pred hcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCC
Confidence 33455566666553 43210 112333344555555555544
No 430
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.05 E-value=0.00014 Score=71.47 Aligned_cols=43 Identities=21% Similarity=0.210 Sum_probs=20.8
Q ss_pred ccCCCCCCEEEcccccCCC----CCChhhhccCCCCeeecccccccc
Q 002063 189 IGNLKNLTYLFLAHCNLRG----RIPESISELRELGTLDICRNKISG 231 (973)
Q Consensus 189 ~~~l~~L~~L~L~~n~l~~----~~p~~l~~l~~L~~L~L~~n~l~~ 231 (973)
+..-+.|+.|+|++|+|.. .+.+.+..-+.|++|+|++|.|+.
T Consensus 66 L~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~ 112 (197)
T 1pgv_A 66 ACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTP 112 (197)
T ss_dssp HTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCH
T ss_pred HhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCH
Confidence 3334455555555555542 222333344555555555555553
No 431
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.04 E-value=0.00073 Score=61.97 Aligned_cols=61 Identities=26% Similarity=0.336 Sum_probs=44.1
Q ss_pred hhhccccccc-cCCCccccccCCCCeeecCCCccCCCCCchhhccc-CceEEccCCccccccCcc
Q 002063 509 DLNLARNSLS-GNIPRSLSLLSSLNALNLSGNKLTGSIPDNLMKLK-LSSIDLSENQLSGSVPLD 571 (973)
Q Consensus 509 ~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-L~~l~ls~N~l~~~~p~~ 571 (973)
.++.+++.|+ ..+|..+ -++|+.|+|++|+|+...+..|..++ |+.|+|++|+|.|++...
T Consensus 12 ~v~Cs~~~L~~~~vP~~l--p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~CdC~l~ 74 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAF--PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCDCRLV 74 (130)
T ss_dssp EEECCSSCCCTTTSCSCC--CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCSGGGH
T ss_pred EEEeCCCCCccccCCCCC--CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeeccCccH
Confidence 4566666665 2444432 23688899999999865566677775 999999999999998864
No 432
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.03 E-value=0.0024 Score=67.83 Aligned_cols=76 Identities=17% Similarity=0.154 Sum_probs=53.7
Q ss_pred CcccCeecccCcEEEEEEEEcCCCceEEEEEeecc--ccHHHHHHHHHHHHhcCCC---ceeeEeEEEEeCCeeEEEEEc
Q 002063 678 LEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG--DGVKVFAAEMEILGKIRHR---NILKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 678 ~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp---niv~l~~~~~~~~~~~lv~e~ 752 (973)
...++.+|.|..+.||+....+ |+.|+||+.... .....+.+|++.|+.+.-. -+.+++++ . ..++||||
T Consensus 17 v~~v~~~g~G~~~~vyrv~l~D-G~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~--~~~lv~e~ 91 (288)
T 3f7w_A 17 VAAVAERGHSHRWHLYRVELAD-GTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW--D--DRTLAMEW 91 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETT-SCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE--E--TTEEEEEC
T ss_pred eEEEEecCCCCCeEEEEEEECC-CCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec--c--CceEEEEe
Confidence 3446788999999999998765 889999976542 2335688999999988421 23344443 2 34789999
Q ss_pred cCCCch
Q 002063 753 MPNGNL 758 (973)
Q Consensus 753 ~~~gsL 758 (973)
++++..
T Consensus 92 l~~~~~ 97 (288)
T 3f7w_A 92 VDERPP 97 (288)
T ss_dssp CCCCCC
T ss_pred ecccCC
Confidence 987654
No 433
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=96.96 E-value=0.0027 Score=71.48 Aligned_cols=77 Identities=14% Similarity=0.191 Sum_probs=48.3
Q ss_pred CCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCcccccccCc--ccccccccccccC---CCCccchHHHHHHHH
Q 002063 797 SPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKVSDYSCFAG--THGYIAPELAYTC---KVSEKSDVFSFGVVL 871 (973)
Q Consensus 797 ~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~---~~~~~~DvwslG~~l 871 (973)
...++|+|++|.||+++.++ +++.||+.+..-.+. .+.....+ ...|.+|+..... ......++.+....+
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~---~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMG---FDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQT 306 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHH---HHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchH---HHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHH
Confidence 67899999999999999876 999999988643211 11111111 2346666654311 111234556778888
Q ss_pred HHHHhC
Q 002063 872 LELVTG 877 (973)
Q Consensus 872 ~ell~g 877 (973)
|+.+++
T Consensus 307 ~~~y~~ 312 (420)
T 2pyw_A 307 WNLFNK 312 (420)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887765
No 434
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.81 E-value=0.0031 Score=67.38 Aligned_cols=70 Identities=16% Similarity=0.138 Sum_probs=45.1
Q ss_pred cCeecccCcEEEEEEEEcCCCceEEEEEeeccc-cHHHHHHHHHHHHhcCCCcee-eEeEEEEeCCeeEEEEEcc-CCCc
Q 002063 681 DNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-GVKVFAAEMEILGKIRHRNIL-KLYACLLKGGSSFLVLEYM-PNGN 757 (973)
Q Consensus 681 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~hpniv-~l~~~~~~~~~~~lv~e~~-~~gs 757 (973)
.+.|+.|....+|+. +.+++|+..... ..-...+|+.+++.+...++. +++++ .++.-++|+||+ ++.+
T Consensus 23 i~~l~gG~tN~~~~~------~~~vlR~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA------GDLCLRIPGKGTEEYINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE------TTEEEEEECC----CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee------eeEEEECCCCCccceeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCcc
Confidence 678999999999999 468899765421 111235688888777533333 44433 344457899999 6655
Q ss_pred h
Q 002063 758 L 758 (973)
Q Consensus 758 L 758 (973)
+
T Consensus 95 l 95 (301)
T 3dxq_A 95 M 95 (301)
T ss_dssp C
T ss_pred C
Confidence 5
No 435
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.75 E-value=0.0087 Score=64.75 Aligned_cols=142 Identities=18% Similarity=0.197 Sum_probs=81.6
Q ss_pred CeecccCcEEEEEEEEcCCCceEEEEEeecc-ccHHHHHHHHHHHHhcCCCc--eeeEeEE-----EEeCCeeEEEEEcc
Q 002063 682 NLIGSGGTGKVYRLDLKKNAGTVAVKQLWKG-DGVKVFAAEMEILGKIRHRN--ILKLYAC-----LLKGGSSFLVLEYM 753 (973)
Q Consensus 682 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hpn--iv~l~~~-----~~~~~~~~lv~e~~ 753 (973)
..++ |....||+....+ |+.+++|+.... .....+..|..+++.+.... +.+++.. ...++..+++|||+
T Consensus 32 ~~l~-g~~n~~y~v~~~~-g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i 109 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDED-RRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSV 109 (328)
T ss_dssp EEEC-CSSSEEEEECCTT-CCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECC
T ss_pred Eeec-CcccceEEEEcCC-CCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEec
Confidence 4566 8888999886643 667999987643 34566778888888774222 3333332 22356678999999
Q ss_pred CCCchH-----H------H---HHhhhcC----CCCCcCHHHH----HHH---------------HHHHHHHHhHhhh--
Q 002063 754 PNGNLF-----Q------A---LHKRVKE----GKPELDWFRR----YKI---------------ALGAAKGIAYLHH-- 794 (973)
Q Consensus 754 ~~gsL~-----~------~---l~~~~~~----~~~~~~~~~~----~~i---------------~~~ia~~l~~LH~-- 794 (973)
+|..+. . . ++..... ..+..++... ..+ ...+...++.+..
T Consensus 110 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 189 (328)
T 1zyl_A 110 GGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHW 189 (328)
T ss_dssp CCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 875432 1 1 1221110 0112222211 000 0011112222221
Q ss_pred --cCCCCeEecCCCCCCeeecCCCceEEecccCCc
Q 002063 795 --DCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 795 --~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
.....++|+|+++.||+++ + .+.+.||+.+.
T Consensus 190 ~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~ 222 (328)
T 1zyl_A 190 REDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDAR 222 (328)
T ss_dssp CSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCC
T ss_pred hhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCC
Confidence 1145689999999999999 4 89999999775
No 436
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.70 E-value=0.0048 Score=66.62 Aligned_cols=145 Identities=14% Similarity=0.108 Sum_probs=80.2
Q ss_pred cCeecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHhcCCCc--eeeEeE------EEEeCCeeEEEEEc
Q 002063 681 DNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRN--ILKLYA------CLLKGGSSFLVLEY 752 (973)
Q Consensus 681 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hpn--iv~l~~------~~~~~~~~~lv~e~ 752 (973)
.+.|+.|....+|+....+ ..+++|+.........+..|+.+++.+.... +.+++. +...++..+++|+|
T Consensus 27 ~~~i~~G~~n~~~~v~~~~--g~~vlk~~~~~~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~ 104 (322)
T 2ppq_A 27 YKGIAEGVENSNFLLHTTK--DPLILTLYEKRVEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISF 104 (322)
T ss_dssp EEEECC---EEEEEEEESS--CCEEEEEECC---CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEEC
T ss_pred eeccCCCcccceEEEEeCC--ccEEEEEeCCCCCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEe
Confidence 3567788889999998653 3788998765333445667888887774222 222221 12234667999999
Q ss_pred cCCCchHH--------------HHHhhhcC-CCC------CcCHHHHHHH------------HHHHHHHHhHhhhc----
Q 002063 753 MPNGNLFQ--------------ALHKRVKE-GKP------ELDWFRRYKI------------ALGAAKGIAYLHHD---- 795 (973)
Q Consensus 753 ~~~gsL~~--------------~l~~~~~~-~~~------~~~~~~~~~i------------~~~ia~~l~~LH~~---- 795 (973)
++|..+.. .++..... ..+ ...|.....- ...+.+.+++++..
T Consensus 105 l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~ 184 (322)
T 2ppq_A 105 LEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKD 184 (322)
T ss_dssp CCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCS
T ss_pred CCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCccc
Confidence 98865311 12221100 000 0123221110 01133344444421
Q ss_pred CCCCeEecCCCCCCeeecCCCceEEecccCCc
Q 002063 796 CSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 796 ~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
...+++|+|+.+.||++++++.+.+.||+.+.
T Consensus 185 ~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 185 LPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp SCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred CCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 13579999999999999987666899999764
No 437
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.51 E-value=0.0052 Score=69.12 Aligned_cols=73 Identities=22% Similarity=0.345 Sum_probs=49.6
Q ss_pred CeecccCcEEEEEEEEcC-------CCceEEEEEeeccccHHHHHHHHHHHHhcCCCce-eeEeEEEEeCCeeEEEEEcc
Q 002063 682 NLIGSGGTGKVYRLDLKK-------NAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNI-LKLYACLLKGGSSFLVLEYM 753 (973)
Q Consensus 682 ~~lG~G~~g~Vy~a~~~~-------~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hpni-v~l~~~~~~~~~~~lv~e~~ 753 (973)
+.|+.|....||++.... .++.+++|+.........+.+|..+++.+...++ .++++.+. + .+||||+
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~~~~li~E~~~l~~L~~~g~~P~l~~~~~--~--g~v~e~l 154 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPETESHLVAESVIFTLLSERHLGPKLYGIFS--G--GRLEEYI 154 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCCHHHHHHHHHHHHHHHHTTSSSCEEEEET--T--EEEECCC
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCcHHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--CEEEEEe
Confidence 567889899999998753 2568999987442222556689999988854344 45555443 2 3899999
Q ss_pred CCCch
Q 002063 754 PNGNL 758 (973)
Q Consensus 754 ~~gsL 758 (973)
+|.++
T Consensus 155 ~G~~l 159 (429)
T 1nw1_A 155 PSRPL 159 (429)
T ss_dssp CEEEC
T ss_pred CCccc
Confidence 86444
No 438
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.39 E-value=0.025 Score=55.66 Aligned_cols=103 Identities=15% Similarity=0.135 Sum_probs=67.0
Q ss_pred CchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCccccCCCCc
Q 002063 756 GNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKIAENSPKV 835 (973)
Q Consensus 756 gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~~~~~~~~~ 835 (973)
-+|.+.|..+ +.++++++++.++.|.+.+|.-.-.. ..-..+=+.|..|++..+|.|...+ +.+.
T Consensus 33 vSL~eIL~~~----~~PlsEEqaWALc~Qc~~~L~~~~~~--~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~-------- 97 (229)
T 2yle_A 33 LSLEEILRLY----NQPINEEQAWAVCYQCCGSLRAAARR--RQPRHRVRSAAQIRVWRDGAVTLAP-AADD-------- 97 (229)
T ss_dssp EEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCSGGGEEEETTSCEEECC-C-----------
T ss_pred ccHHHHHHHc----CCCcCHHHHHHHHHHHHHHHHhhhhc--ccCCceecCCcceEEecCCceeccc-cccc--------
Confidence 3899999876 56799999999999999988776211 1111233457889999999888774 2110
Q ss_pred ccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCC
Q 002063 836 SDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKP 880 (973)
Q Consensus 836 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~p 880 (973)
.....+.|||... ...+.+.=|||+|+++|.-+-=..|
T Consensus 98 ------~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 ------AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp ---------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred ------ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 0123466888763 3456788999999999998864343
No 439
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.30 E-value=0.0096 Score=65.43 Aligned_cols=142 Identities=18% Similarity=0.216 Sum_probs=81.6
Q ss_pred CeecccCcEEEEEEEEcC-------CCceEEEEEeec-cccHHHHHHHHHHHHhcCCCce-eeEeEEEEeCCeeEEEEEc
Q 002063 682 NLIGSGGTGKVYRLDLKK-------NAGTVAVKQLWK-GDGVKVFAAEMEILGKIRHRNI-LKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 682 ~~lG~G~~g~Vy~a~~~~-------~~~~vavK~~~~-~~~~~~~~~E~~~l~~l~hpni-v~l~~~~~~~~~~~lv~e~ 752 (973)
+.+..|-...+|+..... +++.|++|+... ........+|.++++.+.-.++ .++++++.. .+||||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e~ 131 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQY 131 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEEC
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEEE
Confidence 467778888899988752 356899997533 1245566789999988843222 455555433 289999
Q ss_pred cCCCchHH--------------HH---HhhhcCCCCCcC--HHHHHHHHHHHHH-------------------HHhHhh-
Q 002063 753 MPNGNLFQ--------------AL---HKRVKEGKPELD--WFRRYKIALGAAK-------------------GIAYLH- 793 (973)
Q Consensus 753 ~~~gsL~~--------------~l---~~~~~~~~~~~~--~~~~~~i~~~ia~-------------------~l~~LH- 793 (973)
++|.++.. .+ +........... |.++.++..++.. .++.+.
T Consensus 132 i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~ 211 (379)
T 3feg_A 132 IPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRK 211 (379)
T ss_dssp CSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHHH
T ss_pred ecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHHH
Confidence 98865531 11 111000011122 3444444443321 122222
Q ss_pred ---h-cCCCCeEecCCCCCCeeecCC----CceEEecccCCc
Q 002063 794 ---H-DCSPPIIHRDIKSSNILLDED----YEPKIADFGVAK 827 (973)
Q Consensus 794 ---~-~~~~~ivH~Dlkp~Nill~~~----~~~kl~Dfgl~~ 827 (973)
. .....++|+|+.+.||+++.+ +.+.+.||..+.
T Consensus 212 ~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 212 LLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 1 113468999999999999876 789999999875
No 440
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.14 E-value=0.01 Score=54.28 Aligned_cols=56 Identities=27% Similarity=0.395 Sum_probs=32.3
Q ss_pred EEEcccCCCC-CCCChhhhcCCCCCEEecCCCcCCCCccccccccccCCEEEccCcccc
Q 002063 437 QLVLQNNRFS-GELPSELGRLTNLERLILTNNNFSGKIPSALGALRQLSSLHLEENALT 494 (973)
Q Consensus 437 ~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 494 (973)
.++.+++.++ ..+|..+ .++|+.|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~l--p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAF--PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCC--CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCC--CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4455555554 2333322 135666666666666555566666777777777777654
No 441
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.08 E-value=0.026 Score=61.13 Aligned_cols=143 Identities=13% Similarity=0.127 Sum_probs=72.1
Q ss_pred CeecccCcEE-EEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHhcCCCc--eeeEeEEEEeCCeeEEEEEccCCCch
Q 002063 682 NLIGSGGTGK-VYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRN--ILKLYACLLKGGSSFLVLEYMPNGNL 758 (973)
Q Consensus 682 ~~lG~G~~g~-Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hpn--iv~l~~~~~~~~~~~lv~e~~~~gsL 758 (973)
+.|+.|+... +|+.... +++.+++|...... ...+..|+.+++.+.... +.+++.+.... -+++||++.+..+
T Consensus 24 ~~l~gg~s~~~~~r~~~~-~~~~~vlk~~~~~~-~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~--g~ll~e~l~~~~l 99 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSP-TGAKAVLMDWSPEE-GGDTQPFVDLAQYLRNLDISAPEIYAEEHAR--GLLLIEDLGDALF 99 (333)
T ss_dssp CC--------CCEEEECT-TCCEEEEEECCTTT-TCCSHHHHHHHHHHHHTTCBCCCEEEEETTT--TEEEECCCCSCBH
T ss_pred eECCCCCCCceEEEEEcC-CCCeEEEEECCCCC-CccccHHHHHHHHHHhCCCCCCceeeecCCC--CEEEEeeCCCcch
Confidence 4566665554 6676542 25577777544321 123456777777764222 34555543222 2789999977777
Q ss_pred HHHHHhhhc------------------C---CCCCcCHHHHH-------H-------------HHHHHHHHHhHhh---h
Q 002063 759 FQALHKRVK------------------E---GKPELDWFRRY-------K-------------IALGAAKGIAYLH---H 794 (973)
Q Consensus 759 ~~~l~~~~~------------------~---~~~~~~~~~~~-------~-------------i~~~ia~~l~~LH---~ 794 (973)
.+++..... . ..+.++..... . ....+...++.+. .
T Consensus 100 ~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~ 179 (333)
T 3csv_A 100 TEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQL 179 (333)
T ss_dssp HHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhcc
Confidence 655432100 0 01112111100 0 0001111222221 1
Q ss_pred cCCCCeEecCCCCCCeeecCC----CceEEecccCCcc
Q 002063 795 DCSPPIIHRDIKSSNILLDED----YEPKIADFGVAKI 828 (973)
Q Consensus 795 ~~~~~ivH~Dlkp~Nill~~~----~~~kl~Dfgl~~~ 828 (973)
.....++|||+.+.||+++.+ +.+.+.||+.+..
T Consensus 180 ~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 180 EGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred cCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 114679999999999999875 6789999998863
No 442
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=95.92 E-value=0.02 Score=64.72 Aligned_cols=74 Identities=16% Similarity=0.139 Sum_probs=48.0
Q ss_pred cCeecccCcEEEEEEEEcCCCceEEEEEeeccc-cHHHHHHHHHHHHhcCCCce-eeEeEEEEeCCeeEEEEEccCCCch
Q 002063 681 DNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGD-GVKVFAAEMEILGKIRHRNI-LKLYACLLKGGSSFLVLEYMPNGNL 758 (973)
Q Consensus 681 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~hpni-v~l~~~~~~~~~~~lv~e~~~~gsL 758 (973)
.+.|+.|-...+|++.....+..+++|+..... ..-...+|..+++.+...++ .++++++. + .+||||++|.++
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~l 188 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYAL 188 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEEC
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCccC
Confidence 357888999999999886545788999764321 11112589999998865444 35566552 2 359999987554
No 443
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=95.60 E-value=0.014 Score=64.29 Aligned_cols=73 Identities=19% Similarity=0.181 Sum_probs=43.7
Q ss_pred CeecccCcEEEEEEEEcC--------CCceEEEEEeeccc-cHHHHHHHHHHHHhcCCCce-eeEeEEEEeCCeeEEEEE
Q 002063 682 NLIGSGGTGKVYRLDLKK--------NAGTVAVKQLWKGD-GVKVFAAEMEILGKIRHRNI-LKLYACLLKGGSSFLVLE 751 (973)
Q Consensus 682 ~~lG~G~~g~Vy~a~~~~--------~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~hpni-v~l~~~~~~~~~~~lv~e 751 (973)
+.++.|....+|+..... .++.+++|+..... ......+|.++++.+...++ .++++.+ + -++|||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~e 114 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIEE 114 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccceecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEEE
Confidence 467888889999998753 12678899765422 11123678888888753333 3555443 2 268999
Q ss_pred ccCCCch
Q 002063 752 YMPNGNL 758 (973)
Q Consensus 752 ~~~~gsL 758 (973)
|++|.++
T Consensus 115 ~i~G~~l 121 (369)
T 3c5i_A 115 WLYGDPL 121 (369)
T ss_dssp CCCSEEC
T ss_pred EecCCcC
Confidence 9987543
No 444
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.08 E-value=0.08 Score=57.33 Aligned_cols=68 Identities=10% Similarity=0.132 Sum_probs=43.7
Q ss_pred cccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHhcCC---CceeeEeEE------EEeCCeeEEEEEccCC
Q 002063 685 GSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRH---RNILKLYAC------LLKGGSSFLVLEYMPN 755 (973)
Q Consensus 685 G~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h---pniv~l~~~------~~~~~~~~lv~e~~~~ 755 (973)
|.|....||+....+ | .+++|+...... .+|+.+++.+.. |.+.+++.. ...++..+++|+|++|
T Consensus 32 G~g~~N~vy~v~~~~-g-~~vLK~~~~~~~----~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~G 105 (339)
T 3i1a_A 32 GADTNAFAYQADSES-K-SYFIKLKYGYHD----EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIHA 105 (339)
T ss_dssp TSCSSCEEEEEECSS-C-EEEEEEEECSSC----CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCCC
T ss_pred cCccccceEEEEeCC-C-CEEEEEecCccc----hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccCC
Confidence 444468999998654 4 899997665432 456666666531 224444432 2345778999999998
Q ss_pred Cch
Q 002063 756 GNL 758 (973)
Q Consensus 756 gsL 758 (973)
..+
T Consensus 106 ~~~ 108 (339)
T 3i1a_A 106 PNG 108 (339)
T ss_dssp CBT
T ss_pred CcC
Confidence 765
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=92.66 E-value=0.46 Score=52.23 Aligned_cols=142 Identities=17% Similarity=0.168 Sum_probs=79.7
Q ss_pred CeecccCcEEEEEEEEcC-------CCceEEEEEeeccccH--------------------HHHHHHHHHHHhcCCCc-e
Q 002063 682 NLIGSGGTGKVYRLDLKK-------NAGTVAVKQLWKGDGV--------------------KVFAAEMEILGKIRHRN-I 733 (973)
Q Consensus 682 ~~lG~G~~g~Vy~a~~~~-------~~~~vavK~~~~~~~~--------------------~~~~~E~~~l~~l~hpn-i 733 (973)
+.|..|-...+|++.... .+..|.+++.-...+. +....|.++++.+...+ .
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 456678888899988753 1367888876432110 11224888888885333 3
Q ss_pred eeEeEEEEeCCeeEEEEEccCCCchHH--------------HH---HhhhcCCCCCcC--HHHHHHHHHHHH--------
Q 002063 734 LKLYACLLKGGSSFLVLEYMPNGNLFQ--------------AL---HKRVKEGKPELD--WFRRYKIALGAA-------- 786 (973)
Q Consensus 734 v~l~~~~~~~~~~~lv~e~~~~gsL~~--------------~l---~~~~~~~~~~~~--~~~~~~i~~~ia-------- 786 (973)
.++++++.. .+|+||++|-+|.. .+ +........... |..+.++..++.
T Consensus 138 Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 455665532 28999998755421 11 110000111222 223333333221
Q ss_pred --------------HHH----hHhhh-cCCCCeEecCCCCCCeeecCC------CceEEecccCCc
Q 002063 787 --------------KGI----AYLHH-DCSPPIIHRDIKSSNILLDED------YEPKIADFGVAK 827 (973)
Q Consensus 787 --------------~~l----~~LH~-~~~~~ivH~Dlkp~Nill~~~------~~~kl~Dfgl~~ 827 (973)
..+ +++.. .....++|+|+.+.||+++.+ +.+.+.||..+.
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 111 12221 123468899999999999887 789999999875
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=92.29 E-value=0.39 Score=53.37 Aligned_cols=73 Identities=15% Similarity=0.137 Sum_probs=46.8
Q ss_pred CeecccCcEEEEEEEEcCC-------CceEEEEEeeccc-cHHHHHHHHHHHHhcCCCce-eeEeEEEEeCCeeEEEEEc
Q 002063 682 NLIGSGGTGKVYRLDLKKN-------AGTVAVKQLWKGD-GVKVFAAEMEILGKIRHRNI-LKLYACLLKGGSSFLVLEY 752 (973)
Q Consensus 682 ~~lG~G~~g~Vy~a~~~~~-------~~~vavK~~~~~~-~~~~~~~E~~~l~~l~hpni-v~l~~~~~~~~~~~lv~e~ 752 (973)
+.+..|-...+|+...... ++.|++|+..... ..-...+|.++++.+.-.++ .++++.+ . -++||||
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~idR~~E~~~l~~L~~~gi~P~l~~~~--~--~~~I~ef 151 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDVFRYLSNINIAPNIIADF--P--EGRIEEF 151 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEEEC
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcCHHHHHHHHHHHHhcCCCCCEEEEc--C--CCEEEEE
Confidence 4677788889999887631 4689999754321 11123678888888853333 3444432 2 2789999
Q ss_pred cCCCch
Q 002063 753 MPNGNL 758 (973)
Q Consensus 753 ~~~gsL 758 (973)
++|.++
T Consensus 152 I~G~~l 157 (424)
T 3mes_A 152 IDGEPL 157 (424)
T ss_dssp CCSEEC
T ss_pred eCCccC
Confidence 998664
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=87.03 E-value=1.7 Score=47.86 Aligned_cols=30 Identities=30% Similarity=0.430 Sum_probs=25.0
Q ss_pred CeEecCCCCCCeee------cCCCceEEecccCCcc
Q 002063 799 PIIHRDIKSSNILL------DEDYEPKIADFGVAKI 828 (973)
Q Consensus 799 ~ivH~Dlkp~Nill------~~~~~~kl~Dfgl~~~ 828 (973)
.++|+|+.+.||++ +++..+.+.||.+|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 36799999999999 3456799999998863
No 448
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=77.82 E-value=5.8 Score=38.88 Aligned_cols=118 Identities=9% Similarity=0.070 Sum_probs=79.1
Q ss_pred CCCceeeEeEEEEeCCeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHhHhhhcCCCCeEecCCCCC
Q 002063 729 RHRNILKLYACLLKGGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIAYLHHDCSPPIIHRDIKSS 808 (973)
Q Consensus 729 ~hpniv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlkp~ 808 (973)
.||+.++. .+-..++.+.+.|+.-+++-=+..++ ..+...+++++..|+....+++ .=+|--+.|+
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~ik--------~~~~~eKlr~l~ni~~l~~~~~-----~r~tf~L~P~ 108 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNIK--------SFTKNEKLRYLLNIKNLEEVNR-----TRYTFVLAPD 108 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGGG--------GSCHHHHHHHHHHGGGGGGGGG-----SSEECCCSGG
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHHHH--------hcCHHHHHHHHHHHHHHHHHhc-----CceEEEEecc
Confidence 68888876 55566676666666543221111122 3678889999999998877666 2478899999
Q ss_pred CeeecCCCceEEecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCcc
Q 002063 809 NILLDEDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEEE 884 (973)
Q Consensus 809 Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~~ 884 (973)
|++++.++.+++.-.|+...+ +|.. .++..=.-.+=+++..+++++..|+.-
T Consensus 109 NL~f~~~~~p~i~~RGik~~l-------------------~P~~-----~~ee~fL~qyKAliiall~~K~~Fe~l 160 (215)
T 4ann_A 109 ELFFTRDGLPIAKTRGLQNVV-------------------DPLP-----VSEAEFLTRYKALVICAFNEKQSFDAL 160 (215)
T ss_dssp GEEECTTSCEEESCCEETTTB-------------------SCCC-----CCHHHHHHHHHHHHHHHHCTTCCHHHH
T ss_pred eEEEcCCCCEEEEEccCccCC-------------------CCCC-----CCHHHHHHHHHHHHHHHHcCCCCHHHH
Confidence 999999999999877754322 2221 112222334677888999999998653
No 449
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=75.92 E-value=0.35 Score=54.60 Aligned_cols=60 Identities=8% Similarity=-0.041 Sum_probs=18.1
Q ss_pred cccCeecccCcEEEEEEEEcCCCceEEE------EEeec----cccHHHHHHHHHHHHhcCCCceeeEeEEEE
Q 002063 679 EEDNLIGSGGTGKVYRLDLKKNAGTVAV------KQLWK----GDGVKVFAAEMEILGKIRHRNILKLYACLL 741 (973)
Q Consensus 679 ~~~~~lG~G~~g~Vy~a~~~~~~~~vav------K~~~~----~~~~~~~~~E~~~l~~l~hpniv~l~~~~~ 741 (973)
.+.+.+| ||.||+|.+......||| |.... .+....+.+|..+++..+|||+++.+++..
T Consensus 145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp CSTTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred cccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 3445676 999999999865568888 65543 123345778899999999999999987654
No 450
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=75.51 E-value=11 Score=37.07 Aligned_cols=116 Identities=14% Similarity=0.154 Sum_probs=78.7
Q ss_pred CCCceeeEeEEEEeCCeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHHHHHHh-HhhhcCCCCeEecCCCC
Q 002063 729 RHRNILKLYACLLKGGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGAAKGIA-YLHHDCSPPIIHRDIKS 807 (973)
Q Consensus 729 ~hpniv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~ia~~l~-~LH~~~~~~ivH~Dlkp 807 (973)
.||++ -..+-.+++.+.+.++.-+++.=+..++ ..+...+++++..++.... +++ .-+|--+.|
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~--------~~~~~eKlrll~nl~~L~~~~~~-----~r~tf~l~P 112 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR--------KTTLLSRIRAAIHLVSKVKHHSA-----RRLIFIVCP 112 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH--------TSCHHHHHHHHHHHHHHHSSCCS-----SSEECCCCG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH--------hcCHHHHHHHHHHHHHHHHHhhh-----CceeEEEeC
Confidence 67888 4444567777777777654543344444 3578889999999988776 555 357888999
Q ss_pred CCeeecCCCceEEecccCCccccCCCCcccccccCcccccccccccccCCCCccchHHHHHHHHHHHHhCCCCCCc
Q 002063 808 SNILLDEDYEPKIADFGVAKIAENSPKVSDYSCFAGTHGYIAPELAYTCKVSEKSDVFSFGVVLLELVTGRKPVEE 883 (973)
Q Consensus 808 ~Nill~~~~~~kl~Dfgl~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~~l~ell~g~~pf~~ 883 (973)
+|++++.++.+++.-.|+-.. ++|... ++.-=.-.+=|++..++.++..|+.
T Consensus 113 ~NL~f~~~~~p~i~hRGi~~~-------------------lpP~e~-----~ee~fl~qyKali~all~~K~~Fe~ 164 (219)
T 4ano_A 113 ENLMFNRALEPFFLHVGVKES-------------------LPPDEW-----DDERLLREVKATVLALTEGEYRFDE 164 (219)
T ss_dssp GGEEECTTCCEEESCCEETTT-------------------BSSCSC-----CHHHHHHHHHHHHHHHTTCSSCHHH
T ss_pred ceEEEeCCCcEEEEEcCCccc-------------------CCCCCC-----CHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 999999999999997775432 233321 1111222466778888888888764
No 451
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=46.97 E-value=2.5e+02 Score=32.19 Aligned_cols=86 Identities=17% Similarity=0.133 Sum_probs=50.8
Q ss_pred eeEeEEEEeCCeeEEEEEccCCCchHHHH----------HhhhcCCCC--CcCHHHHHHHHHHHH--HHHhHhhhcCCCC
Q 002063 734 LKLYACLLKGGSSFLVLEYMPNGNLFQAL----------HKRVKEGKP--ELDWFRRYKIALGAA--KGIAYLHHDCSPP 799 (973)
Q Consensus 734 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l----------~~~~~~~~~--~~~~~~~~~i~~~ia--~~l~~LH~~~~~~ 799 (973)
++.+.+........+ .|++++.++.+.+ .+....... ...+..+..++..+| +.+.|+= |
T Consensus 402 i~~Y~Vipls~~~Gl-IE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YIL-----G 475 (614)
T 3ls8_A 402 LTPYKVLATSTKHGF-MQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYIL-----G 475 (614)
T ss_dssp CCCCCEEESSSSEEE-EECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHH-----T
T ss_pred eeccEEEEecCCCce-EEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheee-----e
Confidence 344555544444444 4777765555444 333221111 123555555665554 3455655 2
Q ss_pred eEecCCCCCCeeecCCCceEEecccCCc
Q 002063 800 IIHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 800 ivH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
-+|=.++|||++.+|++.=+|||.+-
T Consensus 476 --igDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 476 --VGDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp --CCCCCTTSEEECTTSCEEECCCSSCT
T ss_pred --ccCCCCcceeEcCCCCEeeeehHHhh
Confidence 25667999999999999999999874
No 452
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=42.29 E-value=19 Score=25.11 Aligned_cols=9 Identities=0% Similarity=0.453 Sum_probs=4.0
Q ss_pred hhhHHHHHH
Q 002063 619 VLFCIIAVA 627 (973)
Q Consensus 619 ~~~~~~~~~ 627 (973)
+..+++++.
T Consensus 14 Ia~~vVGvl 22 (44)
T 2jwa_A 14 IISAVVGIL 22 (44)
T ss_dssp HHHHHHHHH
T ss_pred hHHHHHHHH
Confidence 344455533
No 453
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=33.06 E-value=34 Score=23.07 Aligned_cols=11 Identities=18% Similarity=0.401 Sum_probs=4.5
Q ss_pred hhhHHHHHHHH
Q 002063 619 VLFCIIAVALA 629 (973)
Q Consensus 619 ~~~~~~~~~~~ 629 (973)
+.-+++++.++
T Consensus 13 IAGiVvG~v~g 23 (38)
T 2k1k_A 13 IVAVIFGLLLG 23 (38)
T ss_dssp HHHHHHHHHHH
T ss_pred eeeeehHHHHH
Confidence 33344444433
No 454
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=31.44 E-value=2.1e+02 Score=33.40 Aligned_cols=45 Identities=24% Similarity=0.107 Sum_probs=31.7
Q ss_pred HHHHHHHHHHH--HHHhHhhhcCCCCeEecCCCCCCeeecCCCceEEecccCCc
Q 002063 776 FRRYKIALGAA--KGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAK 827 (973)
Q Consensus 776 ~~~~~i~~~ia--~~l~~LH~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfgl~~ 827 (973)
..+..++..+| +.+.|+= | =+|=.++|||++.+|++.-+|||.+-
T Consensus 529 ~ar~nF~~SlA~~Svv~YIL-----G--lGDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 529 EVMDTYIKSCAGYCVITYLL-----G--VGDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-----T--CCCCCTTTEEECTTSCEEECCCCSCT
T ss_pred HHHHHHHHHHHHHHHHHHHc-----c--CCCCCCcceEEeCCCCEEEEeehhhh
Confidence 34445555544 3344544 1 36888999999999999999999864
No 455
>3ox7_P MH027; urokinase-type plasminogen activator, peptidyl inhibitor, pharmacophore, hydrolase, hydrolase-hydrolase inhibitor COM; HET: PG4; 1.58A {Homo sapiens} PDB: 3oy5_P 3oy6_P
Probab=26.97 E-value=20 Score=20.03 Aligned_cols=10 Identities=30% Similarity=0.999 Sum_probs=7.5
Q ss_pred CCCCCcceee
Q 002063 58 DSPCGFSGIT 67 (973)
Q Consensus 58 ~~~c~w~gv~ 67 (973)
+-.|+|.|..
T Consensus 5 dgacswrgle 14 (23)
T 3ox7_P 5 DGACSWRGLE 14 (26)
T ss_pred Ccccccccch
Confidence 4469999975
No 456
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=22.79 E-value=66 Score=26.99 Aligned_cols=46 Identities=17% Similarity=0.174 Sum_probs=26.1
Q ss_pred cccCCCccccCccccchhhccccccccCCCccccccCCCCeeecCCC
Q 002063 493 LTGSIPNEMGDCARIVDLNLARNSLSGNIPRSLSLLSSLNALNLSGN 539 (973)
Q Consensus 493 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 539 (973)
++.+-...|.++.+|+.+.+-.+ ++.+-...|.++.+|+.+.+.+.
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 34444455666666666666554 33344556666777776666543
No 457
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=22.47 E-value=1.1e+02 Score=25.55 Aligned_cols=39 Identities=28% Similarity=0.320 Sum_probs=15.4
Q ss_pred CCccCCCCCCCEEEcccCCCCCCCChhhhcCCCCCEEecC
Q 002063 426 SPLIGLSTSLSQLVLQNNRFSGELPSELGRLTNLERLILT 465 (973)
Q Consensus 426 ~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 465 (973)
...|.++.+|+.+.|-.+ ++..-..+|.++.+|+.+.+.
T Consensus 13 ~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~ 51 (100)
T 2lz0_A 13 KSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILT 51 (100)
T ss_dssp SCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEEC
T ss_pred HHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEc
Confidence 333444444444444332 222333344444444444443
No 458
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=22.41 E-value=2e+02 Score=30.11 Aligned_cols=140 Identities=13% Similarity=0.118 Sum_probs=67.1
Q ss_pred CcccCeecccCcEEEEEEEEcCCCceEEEEEeeccccHHHHHHHHHHHHhcCCCceeeEeEE-----------------E
Q 002063 678 LEEDNLIGSGGTGKVYRLDLKKNAGTVAVKQLWKGDGVKVFAAEMEILGKIRHRNILKLYAC-----------------L 740 (973)
Q Consensus 678 ~~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~-----------------~ 740 (973)
++.++..-.|..| ||.+.. ++..|+||-. ..-..+.+..++...-.+.-|...-+... .
T Consensus 71 v~~I~~s~~Gstg-vff~~t--d~~~~VVK~s-~~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~~~~ 146 (342)
T 1cja_A 71 FKGIERSEKGTEG-LFFVET--ESGVFIVKRS-TNIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDKSF 146 (342)
T ss_dssp EEEEEECCSTTSC-EEEEEE--SSCEEEEECC-TTHHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCSSS
T ss_pred eeEEEeccCCCCC-eEEEEe--CCCEEEEeCc-HHHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhhhhh
Confidence 4455555666655 454444 3678999944 22222223333333333444443211111 0
Q ss_pred -----EeCCeeEEEEEccCCCchHHHHHhhhcCCCCCcCHHHHHHHHHHH--HHHHhHhh-hcCCCCeEe-cCCCCCCee
Q 002063 741 -----LKGGSSFLVLEYMPNGNLFQALHKRVKEGKPELDWFRRYKIALGA--AKGIAYLH-HDCSPPIIH-RDIKSSNIL 811 (973)
Q Consensus 741 -----~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~i~~~i--a~~l~~LH-~~~~~~ivH-~Dlkp~Nil 811 (973)
......+++|||.+|..|.+.-.... ...+.... +.++ .-++..+. ..++.+.+. .--.+.|||
T Consensus 147 ~~l~~l~~~~~~l~meyv~G~~L~e~~~~~~---~~~f~~~~----~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL 219 (342)
T 1cja_A 147 RVITTLANQANILLMELVRGITLNKLTTTSA---PEVLTKST----MQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIM 219 (342)
T ss_dssp CHHHHHTTCSEEEEEECCCEEESTTCCSSSH---HHHSCHHH----HHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEE
T ss_pred HHHHHhhcccceehhhhcCCCccccchhhhh---hhhcCHHH----HHhhchhheehhhhcCCccCcccccCCCChhheE
Confidence 01224569999998766543211000 00122222 2222 22344444 332223222 235899999
Q ss_pred ecCCCc-eEEecccCCcc
Q 002063 812 LDEDYE-PKIADFGVAKI 828 (973)
Q Consensus 812 l~~~~~-~kl~Dfgl~~~ 828 (973)
+++++. +.+.|-+.+..
T Consensus 220 ~~~~n~~~~~IDhn~af~ 237 (342)
T 1cja_A 220 LSERGATVVPIDSKIIPL 237 (342)
T ss_dssp EESBTTCEEECSCCCCCC
T ss_pred EeCCCCeEEEEcCCcccc
Confidence 987555 88899888753
Done!