Your job contains 1 sequence.
>002065
MAVNHQQQSLWREVLELTKTAQDRNTDPLTWAIQLSSTLNSAADGDGPTLPSTELAHLLV
SHICWDNHVPITWKFLEKALTLKIVPPSLVLALLSTRVISNRQLHPAAYRLYLEFLTRHA
FSFASLVNGPNYDKIMNSIDDVLNLSQIFGLKVCESGVLLVEFVFSVVWQLLDASLDDEG
LLEFASDKNFKWPTRPQDMEIDGIDGFIDKRSEHHEGLFRANTTMAIELIGEFLQNKVTS
RILYLAHMNMPSHWGGFIERLRLLALKSAALRNSKVITPEALLQLASDTRGDLGRKSKTA
PQKECHAVAFPGSLMSLAGQCNGTSRSALWLPIDLFLEDAMDGTQVAATSAVEILTGLVK
ALQVVNGTTWHDTFLGLWIAALRLLQRERDPSEGPVPRIDSSLCMVLSVTTLTVADIIEE
EESELIDETEQSPSNLPKDKQAPGRRRKDLVTSLQLLGDFEDMLTPPPFVRSIANQAAAK
AIMFISGLTVGNGYYESVSMNGLATSCLGNMRHLIVEACIARNLLDTSAYLWPGYVNASD
SNQVPCSIATQMSGWSSLMKGSPLTPSLTNALVVTPASSLAEIEKVYEIAVNGSDDEKIC
AATVLCGASLVRGWSVQENTILFIIKLLSPPVPADYSGSESHLIGYAALLNTLLVGISSV
DCIQIFSLHGWVPLLAAALMPICEVFGSSIPNASWTLSSGEEFSCYAVFSNAFTILVRLW
RFHKPPLEQLTVDMPLVASQLSPEYLLLVRNSKLASFGTSPKDQMKSKRFSKNIKFSTDP
IFMDSFPKLKRWYRQNEECIASTLTGLVHGTSVHLIVDALLTKMFRKINRSGTPLTSATS
GSTNSSGSGLEDVSIKLKVPAWDILEATPFVLDAALAACAHGRLSPRELATGLKELSDCL
PATLATVVSYFSAEVTRGLWKPAFMNGTDWPSPATNLSSIEQQIKKILAATGVDVPTVAG
EILQLRFLYHWLP
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 002065
(973 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2039356 - symbol:REF4 "AT2G48110" species:3702... 1414 2.6e-256 3
TAIR|locus:2088050 - symbol:RFR1 "AT3G23590" species:3702... 1611 1.4e-165 1
>TAIR|locus:2039356 [details] [associations]
symbol:REF4 "AT2G48110" species:3702 "Arabidopsis
thaliana" [GO:0009698 "phenylpropanoid metabolic process"
evidence=IMP] [GO:0016020 "membrane" evidence=TAS] [GO:2000762
"regulation of phenylpropanoid metabolic process" evidence=IGI]
EMBL:CP002685 GO:GO:0016020 GO:GO:0006355 GO:GO:0009698
GO:GO:0006351 EMBL:AC006072 GO:GO:0016592 eggNOG:NOG257621
HOGENOM:HOG000242204 GO:GO:2000762 EMBL:X96481 IPI:IPI00517586
PIR:E84923 RefSeq:NP_566125.4 UniGene:At.36290 PRIDE:F4IN69
EnsemblPlants:AT2G48110.1 GeneID:819423 KEGG:ath:AT2G48110
TAIR:At2g48110 InParanoid:Q9ZU78 OMA:ALWLPID Uniprot:F4IN69
Length = 1275
Score = 1414 (502.8 bits), Expect = 2.6e-256, Sum P(3) = 2.6e-256
Identities = 271/410 (66%), Positives = 321/410 (78%)
Query: 552 MSGWSSLMKGSPLTPSLTNALVVTPASSLAEIEKVYEIAVNGSDDEKICAATVLCGASLV 611
+S WS +MKGSPLTPSLTN+L+ TPASSLAEIEK+YE+A GS+DEKI A++LCGASL
Sbjct: 492 ISCWSLVMKGSPLTPSLTNSLITTPASSLAEIEKMYEVATTGSEDEKIAVASILCGASLF 551
Query: 612 RGWSVQENTILFIIKLLSPPVPADYSGSESHLIGYAALLNTLLVGISSVDCIQIFSLHGW 671
RGWS+QE+ I+FI+ LLSPP PAD SGS SHLI A LN LLVGIS +DC+ IFSLHG
Sbjct: 552 RGWSIQEHVIIFIVTLLSPPAPADLSGSYSHLINSAPFLNVLLVGISPIDCVHIFSLHGV 611
Query: 672 VPLLAAALMPICEVFGSSIPNASWTLSSGEEFSCYAVFSNAFTILVRLWRFHKPPLEQLT 731
VPLLA ALMPICE FGS +PN +WTL +GE S +AVFS AFT+L+RLWRF PPL+ +
Sbjct: 612 VPLLAGALMPICEAFGSGVPNITWTLPTGELISSHAVFSTAFTLLLRLWRFDHPPLDYVL 671
Query: 732 VDMPLVASQLSPEYLLLVRNSKLASFGTSPKDQMKSKRFSKNIKFSTDPIFMDSFPKLKR 791
D+P V Q SPEYLLLVRN +L FG SPKD+M +RFSK I S DPIFMDSFP+LK+
Sbjct: 672 GDVPPVGPQPSPEYLLLVRNCRLECFGKSPKDRMARRRFSKVIDISVDPIFMDSFPRLKQ 731
Query: 792 WYRQNEECIASTLTGLVHGTSVHLIVDALLTKMFRKINRSGTPLXXXXXXXXXXXXXXLE 851
WYRQ++EC+AS L+ L G+ VH IVD+LL+ MF+K N+ G+ +
Sbjct: 732 WYRQHQECMASILSELKTGSPVHHIVDSLLSMMFKKANKGGSQSLTPSSGSSSLSTSGGD 791
Query: 852 DVSIKLKVPAWDILEATPFVLDAALAACAHGRLSPRELATGLKELSDCLPATLATVVSYF 911
D S +LK+PAWDILEA PFVLDAAL ACAHG LSPRELATGLK L+D LPATL T+VSYF
Sbjct: 792 DSSDQLKLPAWDILEAAPFVLDAALTACAHGSLSPRELATGLKILADFLPATLGTMVSYF 851
Query: 912 SAEVTRGLWKPAFMNGTDWPSPATNLSSIEQQIKKILAATGVDVPTVAGE 961
S+EVTRGLWKP MNGTDWPSPA NL+S+EQQI+KILAATGVDVP + +
Sbjct: 852 SSEVTRGLWKPVSMNGTDWPSPAANLASVEQQIEKILAATGVDVPRLPAD 901
Score = 777 (278.6 bits), Expect = 2.6e-256, Sum P(3) = 2.6e-256
Identities = 152/252 (60%), Positives = 192/252 (76%)
Query: 1 MAVNHQQQSLWREVLELTKTAQDRNTDPLTWAIQLSSTLNSAADGDGPTLPSTELAHLLV 60
MA + Q SLW V L ++AQ++N DPL WA+QL TL SA G +LPS +LA LV
Sbjct: 1 MAPSEFQPSLWESVTSLIRSAQEKNVDPLHWALQLRLTLASA----GISLPSPDLAQFLV 56
Query: 61 SHICWDNHVPITWKFLEKALTLKIVPPSLVLALLSTRVISNRQLHPAAYRLYLEFLTRHA 120
+HI W+NH P++WK LEKA+++ IVPP LVLALLS RVI NR+LHPAAYRLY+E L RHA
Sbjct: 57 THIFWENHSPLSWKLLEKAISVNIVPPLLVLALLSPRVIPNRKLHPAAYRLYMELLKRHA 116
Query: 121 FSFASLVNGPNYDKIMNSIDDVLNLSQIFGLKVCESGVLLVEFVFSVVWQLLDASLDDEG 180
FSF L+ P Y K MNSIDD+L+LS+ FG++ E G +L+ FVFS+VW+LLDASLD+EG
Sbjct: 117 FSFMPLIRAPGYHKTMNSIDDILHLSETFGVQDQEPGSILLAFVFSIVWELLDASLDEEG 176
Query: 181 LLEFASDKNFKWPTRPQDMEIDGIDGFIDKRSEHHEGLFRANTTMAIELIGEFLQNKVTS 240
LLE S+K KWP+ P DM++DG++ + KR+E+H+ L +ANT MAIELI EFLQNKVTS
Sbjct: 177 LLELTSNKRSKWPSSPHDMDLDGLENSV-KRNENHDALEKANTEMAIELIQEFLQNKVTS 235
Query: 241 RILYLAHMNMPS 252
RIL+LA NM S
Sbjct: 236 RILHLASQNMES 247
Score = 317 (116.6 bits), Expect = 2.6e-256, Sum P(3) = 2.6e-256
Identities = 89/228 (39%), Positives = 124/228 (54%)
Query: 296 KSKTAPQKECHAVAFPGSLMSLAGQC--------------NGTSRSALWLPIDLF-LEDA 340
+SKT P+ E HA+ GS ++L +GT +A +L L A
Sbjct: 246 ESKTIPRGEFHAIVSSGSKLALTSDSALWLPIDLFFEDIMDGTQAAAASAVENLTGLVKA 305
Query: 341 MDGTQVAATSAVEILTGL-VKALQVVNGTTWHDTFLGLWIAALRLLQRERDPSEGPVPRI 399
+ +TS + L + AL++V + ++ L +L ERDP EGPVPR
Sbjct: 306 LQAAN--STSWHDAFLALWLAALRLVQRENLCLRYC-FFMHMLEILSEERDPIEGPVPRT 362
Query: 400 DSSLCMVLSVTTLTVADXXXXXXXXXXXXXXQSPSNLPKDKQAPGRRRKDLVTSLQLLGD 459
D+ LC++LSVT L VA+ SPSN K+K+ G+ R+ L+ SLQ LGD
Sbjct: 363 DTFLCVLLSVTPLAVANIIEEEESQWIDQTSSSPSNQWKEKK--GKCRQGLINSLQQLGD 420
Query: 460 FEDMLTPPPFVRSIANQAAAKAIMFISGLTVGNGYYESVSMNGLATSC 507
+E +LTPP V+S+ANQAAAKAIMFISG+T NG YE+ SM+ A+ C
Sbjct: 421 YESLLTPPRSVQSVANQAAAKAIMFISGITNSNGSYENTSMSESASGC 468
>TAIR|locus:2088050 [details] [associations]
symbol:RFR1 "AT3G23590" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0016592
"mediator complex" evidence=IDA] [GO:2000762 "regulation of
phenylpropanoid metabolic process" evidence=IMP] [GO:0007155 "cell
adhesion" evidence=RCA] [GO:0010090 "trichome morphogenesis"
evidence=RCA] [GO:0045010 "actin nucleation" evidence=RCA]
[GO:0048765 "root hair cell differentiation" evidence=RCA]
[GO:0071555 "cell wall organization" evidence=RCA] EMBL:CP002686
GO:GO:0006355 GO:GO:0009698 GO:GO:0006351 EMBL:AB023036
GO:GO:0016592 EMBL:AK117119 EMBL:AK230008 IPI:IPI00527950
RefSeq:NP_189001.1 UniGene:At.23102 IntAct:Q9LUG9 PRIDE:Q9LUG9
EnsemblPlants:AT3G23590.1 GeneID:821938 KEGG:ath:AT3G23590
TAIR:At3g23590 eggNOG:NOG257621 HOGENOM:HOG000242204
InParanoid:Q9LUG9 OMA:LTITYKI PhylomeDB:Q9LUG9
ProtClustDB:CLSN2684326 Genevestigator:Q9LUG9 GO:GO:2000762
Uniprot:Q9LUG9
Length = 1309
Score = 1611 (572.2 bits), Expect = 1.4e-165, P = 1.4e-165
Identities = 310/514 (60%), Positives = 390/514 (75%)
Query: 447 RKDLVTSLQLLGDFEDMLTPPPFVRSIANQAAAKAIMFISGLTVGNGYYESVSMNGLATS 506
R DLVTSLQ+LGDF +L PP V S AN+AA KAI+F+SG VG ++ ++M + +
Sbjct: 425 RDDLVTSLQVLGDFPGLLAPPKCVVSAANKAATKAILFLSGGNVGKSCFDVINMKDMPVN 484
Query: 507 CLGNMRHLIVEACIARNLLDTSAYLWPGYVNASDSNQVPCSIATQMSGWSSLMKGSPLTP 566
C GNMRHLIVEACIARN+LD SAY WPGYVN NQ+P S+ ++ WSS +KG+PL
Sbjct: 485 CSGNMRHLIVEACIARNILDMSAYSWPGYVNGR-INQIPQSLPNEVPCWSSFVKGAPLNA 543
Query: 567 SLTNALVVTPASSLAEIEKVYEIAVNGSDDEKICAATVLCGASLVRGWSVQENTILFIIK 626
++ N LV PASSLAE+EK++E+AV GSDDEKI AATVLCGASL RGW++QE+T+ ++ +
Sbjct: 544 AMVNTLVSVPASSLAELEKLFEVAVKGSDDEKISAATVLCGASLTRGWNIQEHTVEYLTR 603
Query: 627 LLSPPVPADYSGSESHLIGYAALLNTLLVGISSVDCIQIFSLHGWVPLLAAALMPICEVF 686
LLSPPVPADYS +E+HLIGYA +LN ++VGI SVD IQIFSLHG VP LA +LMPICE F
Sbjct: 604 LLSPPVPADYSRAENHLIGYACMLNVVIVGIGSVDSIQIFSLHGMVPQLACSLMPICEEF 663
Query: 687 GSSIPNASWTLSSGEEFSCYAVFSNAFTILVRLWRFHKPPLEQLTVDMPLVASQLSPEYL 746
GS P+ SWTL SGE S Y+VFSNAFT+L++LWRF+ PP+E D+P V SQL+PE+L
Sbjct: 664 GSYTPSVSWTLPSGEAISAYSVFSNAFTLLLKLWRFNHPPIEHGVGDVPTVGSQLTPEHL 723
Query: 747 LLVRNSKLASFGTSPKDQMKSKRFSKNIKF-STDPIFMDSFPKLKRWYRQNEECIASTLT 805
L VRNS L S +D+ + KR S+ + S P+F+DSFPKLK WYRQ++ CIA+TL+
Sbjct: 724 LSVRNSYLVSSEILDRDRNR-KRLSEVARAASCQPVFVDSFPKLKVWYRQHQRCIAATLS 782
Query: 806 GLVHGTSVHLIVDALLTKMFRKINRSGTPLXXXXXXXXXXXXXXLEDVSIKLKVPAWDIL 865
GL HG+ VH V+ALL F K+ S T L ED +I+ + PAWDIL
Sbjct: 783 GLTHGSPVHQTVEALLNMTFGKVRGSQT-LNPVNSGTSSSSGAASEDSNIRPEFPAWDIL 841
Query: 866 EATPFVLDAALAACAHGRLSPRELATGLKELSDCLPATLATVVSYFSAEVTRGLWKPAFM 925
+A P+V+DAAL AC HGRLSPR+LATGLK+L+D LPA+LAT+VSYFSAEV+RG+WKP FM
Sbjct: 842 KAVPYVVDAALTACTHGRLSPRQLATGLKDLADFLPASLATIVSYFSAEVSRGVWKPVFM 901
Query: 926 NGTDWPSPATNLSSIEQQIKKILAATGVDVPTVA 959
NG DWPSPATNLS++E+ I KILA TGVD+P++A
Sbjct: 902 NGVDWPSPATNLSTVEEYITKILATTGVDIPSLA 935
Score = 1296 (461.3 bits), Expect = 3.4e-132, P = 3.4e-132
Identities = 274/547 (50%), Positives = 353/547 (64%)
Query: 7 QQSLWREVLELTKTAQDRNTDPLTWAIQLSSTLNSAADGDGPTLPSTELAHLLVSHICWD 66
++++W V+ELTK AQ+ DP WA QLSS L A LPSTELA ++VS+ICWD
Sbjct: 6 RRTVWDCVIELTKMAQENCVDPRLWASQLSSNLKFFA----VELPSTELAEVIVSYICWD 61
Query: 67 NHVPITWKFLEKALTLKIVPPSLVLALLSTRVISNRQLHPAAYRLYLEFLTRHAFSFASL 126
N+VPI WKFLE+A+ LK+V P +VLALL+ RV+ R AAYR+YLE L R+ F+
Sbjct: 62 NNVPIVWKFLERAMALKLVSPLVVLALLADRVVPTRSTQQAAYRIYLELLKRNMFTIKDH 121
Query: 127 VNGPNYDKIMNSIDDVLNLSQIFGLKVCESGVLLVEFVFSVVWQLLDASLDDEGLLEFAS 186
++GP+Y K+M S+ ++L LS++F L + GVLLVEFVF +V QLLDA+L DEGLLE +
Sbjct: 122 ISGPHYQKVMISVSNILRLSELFDLDTSKPGVLLVEFVFKMVSQLLDAALSDEGLLELSQ 181
Query: 187 DKNFKWPTRPQDMEIDGIDGFIDKRSEHHEGLFRANTTMAIELIGEFLQNKVTSRILYLA 246
D + +W + QDMEID + + +K E L NT MAIELI EFL+N V +R+LYL
Sbjct: 182 DSSSQWLVKSQDMEIDAPERYNEKTGSL-EKLQSLNTIMAIELIAEFLRNTVIARLLYLV 240
Query: 247 HMNMPSHWGGFIEXXXXXXXXXXXXXNSKVITPEALLQLASDTRGDLGRKSKTAPQKECH 306
N S W F++ +SKV+ LLQL S+ R SK ++ +
Sbjct: 241 SSNRASKWHEFVQKVQLLGENSSALKHSKVLNSGDLLQLISNRRFGYSYDSKVTSARKSN 300
Query: 307 AVAFPGSLMSLAGQCNGTSRSALWLPIDLFLEDAMDGTQVAATSAVEILTGLVKALQVVN 366
A+ GSL S AG C+G S S+LWLP+DL EDAMDG QV TSA+EI+TGL K L+ +N
Sbjct: 301 AIVDFGSLSSYAGLCHGASLSSLWLPLDLVFEDAMDGYQVNPTSAIEIITGLAKTLKEIN 360
Query: 367 GTTWHDTFLGLWIAALRLLQRERDPSEGPVPRIDSSLCMVLSVTTLTVADXXXXXXXXXX 426
G+TWHDTFLGLWIAALRL+QRERDP EGP+PR+D+ LCM L + L VA+
Sbjct: 361 GSTWHDTFLGLWIAALRLVQRERDPIEGPIPRLDTRLCMSLCIVPLVVANLIEEG----- 415
Query: 427 XXXXQSPSNLPKDKQAPGRRRKDLVTSLQLLGDFEDMLTPPPFVRSIANQAAAKAIMFIS 486
K + + R DLVTSLQ+LGDF +L PP V S AN+AA KAI+F+S
Sbjct: 416 -----------KYESVMEKLRDDLVTSLQVLGDFPGLLAPPKCVVSAANKAATKAILFLS 464
Query: 487 GLTVGNGYYESVSMNGLATSCLGNMRHLIVEACIARNLLDTSAYLWPGYVNA-------S 539
G VG ++ ++M + +C GNMRHLIVEACIARN+LD SAY WPGYVN S
Sbjct: 465 GGNVGKSCFDVINMKDMPVNCSGNMRHLIVEACIARNILDMSAYSWPGYVNGRINQIPQS 524
Query: 540 DSNQVPC 546
N+VPC
Sbjct: 525 LPNEVPC 531
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.134 0.403 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 973 932 0.00092 122 3 11 22 0.38 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 2
No. of states in DFA: 632 (67 KB)
Total size of DFA: 451 KB (2212 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 72.51u 0.14s 72.65t Elapsed: 00:00:03
Total cpu time: 72.51u 0.14s 72.65t Elapsed: 00:00:03
Start: Fri May 10 09:26:56 2013 End: Fri May 10 09:26:59 2013