Query 002069
Match_columns 973
No_of_seqs 947 out of 6816
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 11:02:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002069.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002069hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 2E-78 6.7E-83 746.1 34.5 616 2-626 52-751 (768)
2 3rgz_A Protein brassinosteroid 100.0 7.3E-72 2.5E-76 687.6 33.0 579 2-588 79-738 (768)
3 1ziw_A TOLL-like receptor 3; i 100.0 1.5E-65 5.1E-70 626.5 42.5 589 3-595 7-627 (680)
4 1ziw_A TOLL-like receptor 3; i 100.0 5.8E-65 2E-69 621.3 38.5 585 27-615 7-624 (680)
5 3t6q_A CD180 antigen; protein- 100.0 4.5E-59 1.5E-63 561.5 38.0 539 4-595 16-565 (606)
6 3t6q_A CD180 antigen; protein- 100.0 6.1E-59 2.1E-63 560.4 36.2 520 2-570 35-564 (606)
7 3j0a_A TOLL-like receptor 5; m 100.0 2.8E-57 9.7E-62 563.6 43.0 534 4-595 8-565 (844)
8 3vq2_A TLR4, TOLL-like recepto 100.0 4.1E-58 1.4E-62 553.1 34.3 541 4-595 15-563 (606)
9 3j0a_A TOLL-like receptor 5; m 100.0 5.8E-57 2E-61 560.8 40.1 532 27-615 7-562 (844)
10 3vq2_A TLR4, TOLL-like recepto 100.0 1.7E-56 5.7E-61 539.1 32.0 531 50-617 13-562 (606)
11 2z63_A TOLL-like receptor 4, v 100.0 4.5E-52 1.5E-56 497.0 30.8 538 26-617 9-560 (570)
12 2z63_A TOLL-like receptor 4, v 100.0 6E-52 2.1E-56 496.0 31.1 514 3-570 10-535 (570)
13 2z81_A CD282 antigen, TOLL-lik 100.0 6.6E-51 2.2E-55 484.4 28.0 482 4-519 9-511 (549)
14 4gt4_A Tyrosine-protein kinase 100.0 1.2E-50 4E-55 436.9 19.7 255 701-972 26-302 (308)
15 2z81_A CD282 antigen, TOLL-lik 100.0 6.8E-50 2.3E-54 475.6 26.7 492 26-570 7-514 (549)
16 4asz_A BDNF/NT-3 growth factor 100.0 1E-50 3.6E-55 435.3 17.1 254 701-972 13-285 (299)
17 3omv_A RAF proto-oncogene seri 100.0 6.5E-50 2.2E-54 428.6 22.8 257 700-972 35-296 (307)
18 4b9d_A Serine/threonine-protei 100.0 1.6E-50 5.4E-55 439.2 16.7 252 701-969 24-276 (350)
19 4aoj_A High affinity nerve gro 100.0 5.6E-50 1.9E-54 435.8 20.8 254 701-972 41-315 (329)
20 4fih_A Serine/threonine-protei 100.0 4.8E-50 1.6E-54 434.7 17.8 250 701-970 74-324 (346)
21 4eco_A Uncharacterized protein 100.0 2.9E-50 9.8E-55 483.9 16.4 458 24-519 81-601 (636)
22 2z7x_B TOLL-like receptor 1, v 100.0 5.4E-49 1.8E-53 464.3 26.8 455 3-495 3-482 (520)
23 4eco_A Uncharacterized protein 100.0 1.6E-50 5.3E-55 486.2 13.6 431 2-446 83-600 (636)
24 4ecn_A Leucine-rich repeat pro 100.0 4.3E-49 1.5E-53 479.8 25.5 414 2-446 325-840 (876)
25 3hyh_A Carbon catabolite-derep 100.0 9.9E-49 3.4E-53 412.4 20.3 247 701-970 13-263 (275)
26 2z7x_B TOLL-like receptor 1, v 100.0 1.6E-48 5.6E-53 460.1 23.7 454 27-518 3-481 (520)
27 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.7E-49 5.8E-54 423.7 13.2 247 701-968 32-283 (311)
28 4fie_A Serine/threonine-protei 100.0 8.2E-49 2.8E-53 435.6 18.9 251 700-970 150-401 (423)
29 4g8a_A TOLL-like receptor 4; l 100.0 4.2E-47 1.4E-51 460.5 34.1 530 8-594 39-584 (635)
30 3fpq_A Serine/threonine-protei 100.0 2.3E-48 8E-53 413.5 19.2 248 703-970 28-283 (290)
31 4g8a_A TOLL-like receptor 4; l 100.0 2.3E-47 8E-52 462.8 28.6 534 27-615 34-582 (635)
32 4g3f_A NF-kappa-beta-inducing 100.0 9.9E-49 3.4E-53 423.2 14.7 248 700-971 57-311 (336)
33 3hmm_A TGF-beta receptor type- 100.0 5.9E-48 2E-52 417.4 18.4 262 701-972 3-293 (303)
34 4ecn_A Leucine-rich repeat pro 100.0 1.7E-47 5.7E-52 465.9 23.8 441 24-518 323-864 (876)
35 3ubd_A Ribosomal protein S6 ki 100.0 1.3E-48 4.4E-53 417.3 12.1 249 701-969 24-281 (304)
36 4ase_A Vascular endothelial gr 100.0 3.9E-48 1.3E-52 424.5 15.8 263 694-972 57-343 (353)
37 4g31_A Eukaryotic translation 100.0 7E-47 2.4E-51 406.5 18.3 251 700-969 4-279 (299)
38 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.2E-45 4E-50 439.3 27.5 457 3-496 34-512 (562)
39 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 2.3E-45 8E-50 436.7 25.9 456 24-542 31-510 (562)
40 4b99_A Mitogen-activated prote 100.0 6.5E-44 2.2E-48 398.3 19.7 262 701-970 54-345 (398)
41 3v47_A TOLL-like receptor 5B a 100.0 1.6E-42 5.5E-47 401.9 26.6 388 4-425 14-412 (455)
42 4f9c_A Cell division cycle 7-r 100.0 2.7E-43 9.4E-48 389.3 18.4 197 697-907 17-248 (361)
43 3v47_A TOLL-like receptor 5B a 100.0 6.1E-42 2.1E-46 397.0 26.4 362 2-377 32-412 (455)
44 3uto_A Twitchin; kinase, muscl 100.0 1.3E-42 4.4E-47 407.6 20.0 253 700-970 156-411 (573)
45 3v5w_A G-protein coupled recep 100.0 1.3E-42 4.3E-47 402.4 17.6 250 700-969 188-449 (689)
46 1jl5_A Outer protein YOPM; leu 100.0 2.5E-41 8.5E-46 388.1 23.8 410 22-525 9-436 (454)
47 1jl5_A Outer protein YOPM; leu 100.0 3.7E-41 1.3E-45 386.7 21.7 406 1-476 12-435 (454)
48 3p86_A Serine/threonine-protei 100.0 1.8E-41 6.1E-46 370.3 18.2 259 698-972 34-294 (309)
49 3uim_A Brassinosteroid insensi 100.0 4.3E-41 1.5E-45 371.5 21.0 281 688-972 17-307 (326)
50 2qkw_B Protein kinase; three-h 100.0 7.7E-41 2.6E-45 368.4 20.9 271 694-972 32-311 (321)
51 3fxz_A Serine/threonine-protei 100.0 4.6E-41 1.6E-45 365.1 18.3 251 700-970 19-270 (297)
52 3s95_A LIMK-1, LIM domain kina 100.0 4.4E-40 1.5E-44 360.5 24.0 255 700-972 9-278 (310)
53 2c30_A Serine/threonine-protei 100.0 3.1E-40 1E-44 362.8 22.0 262 689-970 23-295 (321)
54 3fe3_A MAP/microtubule affinit 100.0 1.8E-40 6.2E-45 364.7 19.6 250 700-970 14-265 (328)
55 2yab_A Death-associated protei 100.0 4E-40 1.4E-44 366.1 21.4 255 700-970 11-273 (361)
56 2psq_A Fibroblast growth facto 100.0 5.2E-40 1.8E-44 368.0 21.2 256 700-972 80-360 (370)
57 1tki_A Titin; serine kinase, m 100.0 2.8E-40 9.7E-45 362.7 18.6 252 700-970 4-258 (321)
58 4eqm_A Protein kinase; transfe 100.0 2.9E-40 1E-44 358.4 18.4 258 700-972 10-271 (294)
59 3soa_A Calcium/calmodulin-depe 100.0 4E-40 1.4E-44 375.8 20.2 257 698-970 8-268 (444)
60 1o6l_A RAC-beta serine/threoni 100.0 4.4E-40 1.5E-44 362.5 19.8 252 700-970 4-261 (337)
61 3zgw_A Maternal embryonic leuc 100.0 3.3E-40 1.1E-44 364.4 18.5 251 699-970 8-261 (347)
62 2nru_A Interleukin-1 receptor- 100.0 3.2E-39 1.1E-43 353.3 24.9 276 689-972 13-302 (307)
63 3niz_A Rhodanese family protei 100.0 1E-39 3.6E-44 357.0 20.8 264 700-970 20-301 (311)
64 3kul_A Ephrin type-A receptor 100.0 3.4E-40 1.2E-44 363.1 17.0 254 700-972 48-309 (325)
65 3bz5_A Internalin-J, INLJ; leu 100.0 3.3E-39 1.1E-43 370.8 25.7 366 12-437 30-403 (457)
66 4dc2_A Protein kinase C IOTA t 100.0 5.4E-40 1.8E-44 368.1 18.2 253 700-964 51-307 (396)
67 2y0a_A Death-associated protei 100.0 1E-39 3.6E-44 359.4 19.9 255 700-970 10-272 (326)
68 3c0i_A Peripheral plasma membr 100.0 3.4E-40 1.2E-44 367.1 16.1 258 700-970 23-287 (351)
69 2bdw_A Hypothetical protein K1 100.0 9.9E-40 3.4E-44 364.3 19.7 255 699-970 27-285 (362)
70 3h4j_B AMPK kdaid, SNF1-like p 100.0 2.6E-40 9E-45 363.8 14.6 250 700-970 8-259 (336)
71 4hcu_A Tyrosine-protein kinase 100.0 1.2E-39 4.1E-44 349.2 18.8 252 700-972 9-262 (269)
72 3a8x_A Protein kinase C IOTA t 100.0 1.5E-39 5.1E-44 360.0 20.1 258 700-969 8-275 (345)
73 4euu_A Serine/threonine-protei 100.0 4.1E-39 1.4E-43 354.2 23.0 264 701-971 9-304 (319)
74 3txo_A PKC-L, NPKC-ETA, protei 100.0 3.8E-40 1.3E-44 365.5 14.4 252 699-969 21-280 (353)
75 1o6v_A Internalin A; bacterial 100.0 2.8E-38 9.4E-43 366.5 30.7 346 22-398 44-389 (466)
76 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.8E-39 6.2E-44 347.7 19.2 252 700-972 7-260 (268)
77 1o6v_A Internalin A; bacterial 100.0 1.8E-38 6.1E-43 368.1 29.0 344 47-421 45-388 (466)
78 3qd2_B Eukaryotic translation 100.0 2.3E-39 7.9E-44 358.8 19.7 253 699-970 4-326 (332)
79 3soc_A Activin receptor type-2 100.0 9.9E-40 3.4E-44 359.3 16.4 263 700-972 23-314 (322)
80 3cbl_A C-FES, proto-oncogene t 100.0 8.5E-40 2.9E-44 367.7 15.6 254 700-972 113-370 (377)
81 2qol_A Ephrin receptor; recept 100.0 1.7E-39 5.7E-44 364.0 17.6 254 700-972 44-305 (373)
82 1ob3_A PFPK5, cell division co 100.0 2.1E-39 7.2E-44 350.9 17.8 263 701-970 2-281 (288)
83 3q4u_A Activin receptor type-1 100.0 2.8E-39 9.5E-44 352.7 18.4 258 700-972 7-298 (301)
84 3lb7_A RAF proto-oncogene seri 100.0 1.1E-38 3.9E-43 347.9 22.9 257 700-972 35-296 (307)
85 3bz5_A Internalin-J, INLJ; leu 100.0 8.5E-39 2.9E-43 367.4 22.9 368 33-501 27-394 (457)
86 3o0g_A Cell division protein k 100.0 5.2E-39 1.8E-43 348.7 19.8 263 701-970 2-283 (292)
87 1fot_A TPK1 delta, CAMP-depend 100.0 3.9E-39 1.3E-43 352.4 18.9 249 700-970 5-259 (318)
88 2zv2_A Calcium/calmodulin-depe 100.0 2.7E-39 9.4E-44 352.0 17.6 253 700-970 12-293 (298)
89 3ork_A Serine/threonine protei 100.0 8.4E-40 2.9E-44 358.2 13.4 255 700-969 11-273 (311)
90 3gen_A Tyrosine-protein kinase 100.0 5.1E-39 1.7E-43 347.2 19.3 252 700-972 23-276 (283)
91 1luf_A Muscle-specific tyrosin 100.0 3.1E-39 1.1E-43 359.5 17.9 257 699-972 45-331 (343)
92 1kob_A Twitchin; kinase, intra 100.0 4.2E-39 1.4E-43 361.2 19.1 253 700-970 50-305 (387)
93 1xjd_A Protein kinase C, theta 100.0 1.1E-39 3.8E-44 360.2 14.1 253 698-969 14-269 (345)
94 3cok_A Serine/threonine-protei 100.0 1.6E-39 5.5E-44 350.1 14.7 253 700-970 10-263 (278)
95 3kn6_A Ribosomal protein S6 ki 100.0 3.4E-39 1.2E-43 354.9 17.6 255 702-970 9-271 (325)
96 2i1m_A Macrophage colony-stimu 100.0 5.7E-40 1.9E-44 363.6 11.4 259 698-972 43-322 (333)
97 3l9p_A Anaplastic lymphoma kin 100.0 3.1E-39 1E-43 361.5 17.2 256 700-972 70-341 (367)
98 4fr4_A YANK1, serine/threonine 100.0 5.5E-39 1.9E-43 358.8 19.0 251 700-969 14-271 (384)
99 3tki_A Serine/threonine-protei 100.0 3.3E-39 1.1E-43 354.7 16.6 252 700-970 6-262 (323)
100 3tt0_A Basic fibroblast growth 100.0 6.8E-39 2.3E-43 361.2 19.5 256 700-972 68-348 (382)
101 2i0e_A Protein kinase C-beta I 100.0 3.3E-39 1.1E-43 357.6 16.5 252 699-969 18-276 (353)
102 1rdq_E PKA C-alpha, CAMP-depen 100.0 5.3E-39 1.8E-43 356.1 18.0 247 700-970 40-294 (350)
103 3vhe_A Vascular endothelial gr 100.0 8.8E-40 3E-44 366.3 11.9 264 693-972 14-351 (359)
104 3v8s_A RHO-associated protein 100.0 3.3E-40 1.1E-44 372.1 8.3 259 696-970 64-330 (410)
105 2pmi_A Negative RE, cyclin-dep 100.0 9.1E-39 3.1E-43 350.7 19.5 265 700-970 4-294 (317)
106 2eue_A Carbon catabolite derep 100.0 9.7E-39 3.3E-43 343.4 19.3 249 701-970 13-263 (275)
107 3ugc_A Tyrosine-protein kinase 100.0 7.1E-39 2.4E-43 348.3 18.5 262 700-972 9-287 (295)
108 2x4f_A Myosin light chain kina 100.0 8.5E-39 2.9E-43 358.0 19.4 249 704-970 92-343 (373)
109 2a2a_A Death-associated protei 100.0 1.1E-38 3.9E-43 350.9 20.1 255 700-970 11-273 (321)
110 3dtc_A Mitogen-activated prote 100.0 4.2E-39 1.5E-43 345.4 16.1 255 700-972 6-269 (271)
111 3a62_A Ribosomal protein S6 ki 100.0 9.2E-39 3.1E-43 352.0 19.1 250 700-970 16-277 (327)
112 2w4o_A Calcium/calmodulin-depe 100.0 7.1E-39 2.4E-43 356.0 18.2 252 699-970 51-306 (349)
113 2ivs_A Proto-oncogene tyrosine 100.0 8.7E-39 3E-43 351.1 18.7 256 700-972 22-307 (314)
114 2r5t_A Serine/threonine-protei 100.0 5.1E-39 1.7E-43 358.6 16.6 245 700-965 37-285 (373)
115 2y94_A 5'-AMP-activated protei 100.0 1.1E-38 3.7E-43 366.1 19.7 251 700-970 15-267 (476)
116 3kk8_A Calcium/calmodulin depe 100.0 1.1E-38 3.9E-43 344.7 18.6 254 700-970 5-262 (284)
117 3p1a_A MYT1 kinase, membrane-a 100.0 1.1E-38 3.8E-43 349.0 18.6 248 700-970 56-305 (311)
118 3f3z_A Calcium/calmodulin-depe 100.0 1.3E-38 4.6E-43 342.7 18.9 252 699-970 7-262 (277)
119 2izr_A Casein kinase I isoform 100.0 2.7E-39 9.3E-44 357.4 13.7 255 700-972 8-277 (330)
120 2eva_A TAK1 kinase - TAB1 chim 100.0 1.7E-38 5.7E-43 347.0 19.7 252 700-972 7-259 (307)
121 3qup_A Tyrosine-protein kinase 100.0 1.2E-38 4E-43 351.5 18.4 257 700-972 22-294 (323)
122 1qcf_A Haematopoetic cell kina 100.0 7.3E-39 2.5E-43 369.1 17.5 253 699-972 186-440 (454)
123 3hko_A Calcium/calmodulin-depe 100.0 7.7E-39 2.6E-43 356.5 16.8 263 696-970 21-331 (345)
124 2rku_A Serine/threonine-protei 100.0 2.6E-38 9E-43 343.6 20.4 252 700-970 14-266 (294)
125 3uc3_A Serine/threonine-protei 100.0 1.3E-38 4.3E-43 355.4 18.3 253 700-970 19-275 (361)
126 1rjb_A FL cytokine receptor; k 100.0 5.4E-39 1.9E-43 357.5 15.1 258 699-972 43-330 (344)
127 4f0f_A Serine/threonine-protei 100.0 1.8E-38 6.1E-43 343.6 18.8 254 700-972 18-285 (287)
128 2qr7_A Ribosomal protein S6 ki 100.0 5.9E-39 2E-43 354.8 15.2 253 699-970 20-278 (342)
129 4aw2_A Serine/threonine-protei 100.0 3.5E-39 1.2E-43 366.5 13.7 264 694-970 67-339 (437)
130 2y7j_A Phosphorylase B kinase 100.0 1.9E-38 6.4E-43 354.9 19.2 264 691-970 84-360 (365)
131 4agu_A Cyclin-dependent kinase 100.0 2E-38 6.8E-43 347.6 19.0 263 701-970 3-285 (311)
132 1k9a_A Carboxyl-terminal SRC k 100.0 2.4E-38 8.3E-43 364.0 20.6 248 700-972 192-441 (450)
133 2wqm_A Serine/threonine-protei 100.0 2.2E-38 7.4E-43 347.1 19.2 261 700-972 31-293 (310)
134 4ejn_A RAC-alpha serine/threon 100.0 5.7E-39 1.9E-43 369.6 15.0 250 700-970 147-405 (446)
135 2h34_A Serine/threonine-protei 100.0 1.3E-38 4.4E-43 348.3 17.1 258 699-972 32-292 (309)
136 1p4o_A Insulin-like growth fac 100.0 5.6E-39 1.9E-43 353.9 14.3 260 696-972 20-295 (322)
137 3t9t_A Tyrosine-protein kinase 100.0 1.8E-38 6.2E-43 339.7 17.7 252 700-972 7-260 (267)
138 1mp8_A Focal adhesion kinase 1 100.0 1.7E-38 5.8E-43 342.5 17.6 253 700-972 14-272 (281)
139 3kmu_A ILK, integrin-linked ki 100.0 1.5E-38 5.3E-43 341.1 17.0 251 700-972 9-266 (271)
140 1t46_A HOMO sapiens V-KIT hard 100.0 7.2E-39 2.5E-43 351.6 14.6 257 700-972 22-303 (313)
141 3fdn_A Serine/threonine-protei 100.0 1.5E-38 5.2E-43 342.6 16.6 250 700-970 8-258 (279)
142 1opk_A P150, C-ABL, proto-onco 100.0 1.7E-38 5.8E-43 369.4 18.0 253 700-972 219-474 (495)
143 1u5q_A Serine/threonine protei 100.0 1.6E-38 5.4E-43 352.5 17.0 250 700-970 53-306 (348)
144 2pvf_A Fibroblast growth facto 100.0 2.6E-38 8.8E-43 350.2 18.6 256 700-972 34-314 (334)
145 3poz_A Epidermal growth factor 100.0 1.6E-38 5.6E-43 350.4 16.7 253 700-972 14-274 (327)
146 2owb_A Serine/threonine-protei 100.0 3.2E-38 1.1E-42 349.3 19.1 252 700-970 40-292 (335)
147 3bhy_A Death-associated protei 100.0 3.4E-38 1.1E-42 340.8 18.4 254 701-970 5-266 (283)
148 3dls_A PAS domain-containing s 100.0 2.7E-38 9.3E-43 349.1 18.0 247 698-970 21-275 (335)
149 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.8E-38 6.2E-43 365.3 17.2 252 700-972 183-436 (452)
150 4eut_A Serine/threonine-protei 100.0 2.2E-38 7.5E-43 358.7 17.6 267 700-972 8-305 (396)
151 2w5a_A Serine/threonine-protei 100.0 1.1E-38 3.8E-43 343.8 14.5 257 700-972 5-270 (279)
152 4e5w_A Tyrosine-protein kinase 100.0 3.7E-38 1.3E-42 343.9 18.7 263 700-972 20-298 (302)
153 3gxj_A TGF-beta receptor type- 100.0 1.1E-39 3.9E-44 356.2 6.6 258 700-972 2-293 (303)
154 3gni_B Strad alpha; kinase fol 100.0 4.3E-38 1.5E-42 356.2 19.6 265 700-970 24-334 (389)
155 2vd5_A DMPK protein; serine/th 100.0 3E-39 1E-43 364.4 9.9 262 695-970 55-328 (412)
156 2id5_A Lingo-1, leucine rich r 100.0 8.8E-38 3E-42 364.1 22.4 321 3-350 14-334 (477)
157 3nyv_A Calmodulin-domain prote 100.0 1.9E-38 6.4E-43 369.8 16.7 254 700-970 25-282 (484)
158 3dbq_A Dual specificity protei 100.0 4.1E-38 1.4E-42 349.7 18.5 252 700-970 8-274 (343)
159 1csn_A Casein kinase-1; phosph 100.0 1.8E-38 6.1E-43 345.8 15.3 257 700-972 9-279 (298)
160 1nxk_A MAP kinase-activated pr 100.0 3.9E-38 1.3E-42 356.2 18.5 253 700-970 60-322 (400)
161 3og7_A AKAP9-BRAF fusion prote 100.0 6.4E-38 2.2E-42 339.5 19.1 257 700-972 23-284 (289)
162 3is5_A Calcium-dependent prote 100.0 2.4E-38 8.2E-43 342.0 15.7 254 700-970 21-279 (285)
163 3ttj_A Mitogen-activated prote 100.0 1.1E-37 3.6E-42 359.0 22.0 260 700-970 61-356 (464)
164 3c4z_A Rhodopsin kinase; Ser/T 100.0 9.1E-39 3.1E-43 370.5 13.2 258 700-969 184-448 (543)
165 3llt_A Serine/threonine kinase 100.0 2.9E-38 9.9E-43 353.9 16.8 261 698-970 32-356 (360)
166 3kfa_A Tyrosine-protein kinase 100.0 1.2E-38 4.2E-43 345.2 13.3 254 699-972 11-267 (288)
167 3op5_A Serine/threonine-protei 100.0 1.3E-38 4.6E-43 356.7 13.9 262 700-972 34-325 (364)
168 1qpc_A LCK kinase; alpha beta 100.0 6.8E-38 2.3E-42 337.6 18.8 252 700-972 12-265 (279)
169 2id5_A Lingo-1, leucine rich r 100.0 1.4E-37 4.7E-42 362.4 22.8 320 27-373 14-333 (477)
170 3q5i_A Protein kinase; CDPK, m 100.0 7.4E-38 2.5E-42 366.0 20.4 255 699-970 34-302 (504)
171 3lm5_A Serine/threonine-protei 100.0 2.5E-38 8.6E-43 348.9 15.4 265 691-970 18-288 (327)
172 3kex_A Receptor tyrosine-prote 100.0 2.6E-38 8.8E-43 348.6 15.4 252 701-972 13-272 (325)
173 3g33_A Cell division protein k 100.0 5.3E-38 1.8E-42 343.6 17.8 266 699-970 7-297 (308)
174 3a7i_A MST3 kinase, serine/thr 100.0 1.3E-37 4.4E-42 339.7 20.8 250 700-970 21-271 (303)
175 3c1x_A Hepatocyte growth facto 100.0 4.1E-38 1.4E-42 352.2 17.1 253 701-972 89-351 (373)
176 3lxp_A Non-receptor tyrosine-p 100.0 1.1E-37 3.7E-42 342.5 20.1 259 703-972 33-306 (318)
177 3mtl_A Cell division protein k 100.0 1.7E-38 5.8E-43 349.7 13.6 262 701-970 2-282 (324)
178 2zmd_A Dual specificity protei 100.0 6.4E-38 2.2E-42 353.4 18.5 251 701-970 56-321 (390)
179 2acx_A G protein-coupled recep 100.0 7.9E-39 2.7E-43 371.4 11.3 257 700-970 183-445 (576)
180 2v62_A Serine/threonine-protei 100.0 1.5E-38 5.2E-43 353.4 13.1 261 700-972 36-324 (345)
181 3mdy_A Bone morphogenetic prot 100.0 1.4E-37 4.7E-42 345.3 20.7 265 696-972 32-327 (337)
182 1u59_A Tyrosine-protein kinase 100.0 1.1E-37 3.9E-42 337.2 19.4 252 701-972 9-268 (287)
183 3gbz_A Kinase, CMGC CDK; ssgci 100.0 4.2E-38 1.4E-42 347.4 16.2 265 698-970 31-319 (329)
184 1mqb_A Ephrin type-A receptor 100.0 9.9E-38 3.4E-42 344.9 19.1 252 701-972 44-305 (333)
185 2ac3_A MAP kinase-interacting 100.0 6.4E-38 2.2E-42 344.4 17.4 262 700-970 11-296 (316)
186 3mwu_A Calmodulin-domain prote 100.0 4.7E-38 1.6E-42 366.1 17.3 254 699-970 20-277 (486)
187 4aaa_A Cyclin-dependent kinase 100.0 5.2E-38 1.8E-42 347.2 16.7 264 700-970 24-307 (331)
188 3brb_A Proto-oncogene tyrosine 100.0 1.1E-37 3.9E-42 341.9 19.2 258 699-972 32-304 (313)
189 3lij_A Calcium/calmodulin depe 100.0 9.3E-38 3.2E-42 364.2 19.4 253 700-970 36-292 (494)
190 2clq_A Mitogen-activated prote 100.0 1.6E-37 5.5E-42 337.7 20.0 253 702-970 23-279 (295)
191 2vgo_A Serine/threonine-protei 100.0 8.4E-38 2.9E-42 337.7 17.5 248 700-970 13-263 (284)
192 3i6u_A CDS1, serine/threonine- 100.0 7.7E-38 2.6E-42 356.4 17.8 257 698-970 132-400 (419)
193 3com_A Serine/threonine-protei 100.0 1.5E-37 5.1E-42 341.2 19.5 252 699-970 27-279 (314)
194 2jam_A Calcium/calmodulin-depe 100.0 8.6E-38 2.9E-42 341.2 17.3 251 700-970 8-262 (304)
195 3lzb_A Epidermal growth factor 100.0 9.8E-38 3.4E-42 343.8 17.9 253 700-972 14-274 (327)
196 1ua2_A CAK, cell division prot 100.0 7.5E-38 2.5E-42 348.0 17.1 267 698-970 7-292 (346)
197 1b6c_B TGF-B superfamily recep 100.0 1.5E-37 5.2E-42 345.6 19.5 263 695-972 36-332 (342)
198 3f66_A Hepatocyte growth facto 100.0 1.7E-37 5.9E-42 337.9 19.3 254 700-972 24-287 (298)
199 3oz6_A Mitogen-activated prote 100.0 7.2E-38 2.5E-42 354.0 16.9 264 698-970 6-329 (388)
200 3lxl_A Tyrosine-protein kinase 100.0 1.3E-37 4.6E-42 343.4 18.4 262 700-972 22-299 (327)
201 2yfx_A Tyrosine-protein kinase 100.0 1.2E-37 4.1E-42 343.8 17.8 256 700-972 29-300 (327)
202 1xbb_A Tyrosine-protein kinase 100.0 8.1E-38 2.8E-42 339.1 16.1 253 700-972 15-275 (291)
203 2yex_A Serine/threonine-protei 100.0 2.2E-37 7.4E-42 333.1 19.0 253 699-970 5-262 (276)
204 2h6d_A 5'-AMP-activated protei 100.0 1E-37 3.5E-42 335.7 16.0 251 700-970 10-262 (276)
205 1byg_A CSK, protein (C-termina 100.0 1.1E-37 3.8E-42 335.7 16.3 248 700-972 20-269 (278)
206 2xir_A Vascular endothelial gr 100.0 3.1E-38 1.1E-42 347.0 12.2 264 693-972 19-306 (316)
207 1fvr_A Tyrosine-protein kinase 100.0 1.3E-37 4.5E-42 343.5 17.2 255 700-972 24-296 (327)
208 3byv_A Rhoptry kinase; malaria 100.0 1E-38 3.4E-43 359.4 8.4 246 700-970 72-360 (377)
209 3cc6_A Protein tyrosine kinase 100.0 1.4E-37 4.8E-42 335.4 16.8 253 700-972 11-269 (281)
210 3g2f_A Bone morphogenetic prot 100.0 9E-38 3.1E-42 346.5 15.6 262 700-972 12-314 (336)
211 2h8h_A Proto-oncogene tyrosine 100.0 7.4E-38 2.5E-42 367.4 15.5 252 700-972 266-519 (535)
212 1x8b_A WEE1HU, WEE1-like prote 100.0 2.3E-37 7.9E-42 335.3 18.3 249 699-970 9-280 (289)
213 3pfq_A PKC-B, PKC-beta, protei 100.0 2.1E-37 7.4E-42 371.8 19.8 252 699-969 339-597 (674)
214 1cm8_A Phosphorylated MAP kina 100.0 3.7E-37 1.3E-41 344.4 20.4 259 700-970 24-308 (367)
215 3rp9_A Mitogen-activated prote 100.0 3.7E-37 1.3E-41 356.2 21.0 195 700-902 52-280 (458)
216 4fvq_A Tyrosine-protein kinase 100.0 1.2E-37 4.2E-42 337.5 15.9 247 700-972 7-271 (289)
217 1phk_A Phosphorylase kinase; g 100.0 2.1E-37 7E-42 337.3 17.7 256 698-969 14-283 (298)
218 1t4h_A Serine/threonine-protei 100.0 4.8E-37 1.6E-41 332.9 20.4 250 701-970 26-283 (290)
219 2ozo_A Tyrosine-protein kinase 100.0 2.6E-37 8.9E-42 367.8 19.9 251 702-972 336-594 (613)
220 3mi9_A Cell division protein k 100.0 3.6E-37 1.2E-41 343.6 19.8 263 700-970 16-312 (351)
221 2a19_B Interferon-induced, dou 100.0 3.5E-37 1.2E-41 333.0 19.0 245 699-972 9-270 (284)
222 1u46_A ACK-1, activated CDC42 100.0 8.7E-38 3E-42 339.1 14.3 256 700-972 17-280 (291)
223 3n9x_A Phosphotransferase; mal 100.0 3.5E-37 1.2E-41 352.7 19.8 200 700-907 25-253 (432)
224 3pls_A Macrophage-stimulating 100.0 6.4E-37 2.2E-41 333.5 21.0 253 701-972 21-283 (298)
225 2j7t_A Serine/threonine-protei 100.0 9.3E-38 3.2E-42 340.8 14.1 253 700-970 18-276 (302)
226 3e7e_A HBUB1, BUB1A, mitotic c 100.0 3.7E-37 1.3E-41 345.2 19.3 247 700-972 64-335 (365)
227 2buj_A Serine/threonine-protei 100.0 2.5E-37 8.5E-42 339.9 17.0 257 700-972 28-302 (317)
228 2r3i_A Cell division protein k 100.0 3.9E-37 1.3E-41 335.3 18.3 264 701-970 3-284 (299)
229 4hgt_A Casein kinase I isoform 100.0 1.1E-37 3.6E-42 339.3 13.7 258 699-972 7-276 (296)
230 2xrw_A Mitogen-activated prote 100.0 7E-37 2.4E-41 343.3 20.8 260 700-970 24-319 (371)
231 3eqc_A Dual specificity mitoge 100.0 1.7E-37 5.7E-42 347.6 15.4 260 700-970 32-325 (360)
232 3q60_A ROP5B; pseudokinase, tr 100.0 1.7E-37 5.8E-42 348.7 15.4 256 700-969 61-352 (371)
233 2jii_A Serine/threonine-protei 100.0 7.6E-38 2.6E-42 349.0 12.1 257 701-972 42-332 (352)
234 2ycf_A Serine/threonine-protei 100.0 2.5E-37 8.5E-42 340.5 16.0 256 699-970 8-275 (322)
235 2w1i_A JAK2; chromosomal rearr 100.0 2.7E-37 9.2E-42 340.7 16.3 261 700-972 40-318 (326)
236 2vwi_A Serine/threonine-protei 100.0 1.9E-37 6.5E-42 338.5 14.4 261 699-970 13-288 (303)
237 3uzp_A CKI-delta, CKID, casein 100.0 2.5E-37 8.6E-42 336.3 15.0 257 700-972 8-276 (296)
238 2wei_A Calmodulin-domain prote 100.0 4E-37 1.4E-41 332.9 16.3 255 698-970 19-277 (287)
239 3nsz_A CK II alpha, casein kin 100.0 1.3E-36 4.5E-41 336.2 20.4 255 700-970 35-320 (330)
240 2pml_X PFPK7, Ser/Thr protein 100.0 2.1E-37 7.2E-42 345.3 14.0 256 700-970 30-323 (348)
241 2fst_X Mitogen-activated prote 100.0 4.7E-37 1.6E-41 343.1 16.7 259 700-970 28-312 (367)
242 3fme_A Dual specificity mitoge 100.0 3.2E-37 1.1E-41 334.5 14.7 255 700-969 6-266 (290)
243 3pg1_A Mitogen-activated prote 100.0 5.7E-37 2E-41 343.6 17.1 272 692-970 13-317 (362)
244 2x7f_A TRAF2 and NCK-interacti 100.0 4.6E-37 1.6E-41 339.2 15.9 254 698-970 21-287 (326)
245 3ll6_A Cyclin G-associated kin 100.0 6.8E-37 2.3E-41 339.7 17.3 251 700-972 27-304 (337)
246 4fl3_A Tyrosine-protein kinase 100.0 4.9E-37 1.7E-41 366.1 17.1 246 707-972 375-627 (635)
247 4exu_A Mitogen-activated prote 100.0 1.8E-36 6E-41 340.1 19.9 258 700-970 41-324 (371)
248 3qyz_A Mitogen-activated prote 100.0 1.4E-36 4.9E-41 340.2 18.9 261 700-970 26-314 (364)
249 3rgf_A Cyclin-dependent kinase 100.0 3E-37 1E-41 351.0 13.5 199 701-908 20-238 (405)
250 1vzo_A Ribosomal protein S6 ki 100.0 5.5E-38 1.9E-42 349.9 7.3 255 700-971 53-323 (355)
251 4e7w_A Glycogen synthase kinas 100.0 4.4E-37 1.5E-41 347.4 14.7 260 700-970 39-322 (394)
252 2wtk_C Serine/threonine-protei 100.0 1.7E-36 5.9E-41 331.3 18.9 253 700-970 4-264 (305)
253 3eb0_A Putative uncharacterize 100.0 8.2E-37 2.8E-41 344.5 16.8 261 698-970 4-322 (383)
254 3kvw_A DYRK2, dual specificity 100.0 1E-36 3.5E-41 347.9 17.2 199 700-910 96-303 (429)
255 3sv0_A Casein kinase I-like; t 100.0 8.9E-37 3.1E-41 350.9 16.5 257 700-972 6-274 (483)
256 3an0_A Dual specificity mitoge 100.0 6.3E-37 2.1E-41 340.1 14.2 255 700-970 50-311 (340)
257 1zy4_A Serine/threonine-protei 100.0 2.4E-36 8.2E-41 329.8 18.6 252 699-970 4-284 (303)
258 3e3p_A Protein kinase, putativ 100.0 1.5E-36 5E-41 340.2 17.2 267 694-970 16-315 (360)
259 2y4i_B KSR2, HKSR2, kinase sup 100.0 6E-37 2E-41 337.2 12.3 254 699-972 31-298 (319)
260 1blx_A Cyclin-dependent kinase 100.0 1.7E-36 5.8E-41 334.7 15.6 265 699-970 9-297 (326)
261 1j1b_A Glycogen synthase kinas 100.0 4.2E-36 1.4E-40 342.1 19.4 258 701-970 54-337 (420)
262 1wak_A Serine/threonine-protei 100.0 2.4E-36 8.2E-41 343.5 17.3 260 700-970 36-392 (397)
263 2b9h_A MAP kinase FUS3, mitoge 100.0 2.5E-36 8.7E-41 337.3 17.1 261 700-970 10-306 (353)
264 1z57_A Dual specificity protei 100.0 4.5E-36 1.5E-40 333.3 18.3 259 700-970 13-329 (339)
265 3coi_A Mitogen-activated prote 100.0 6.4E-36 2.2E-40 333.7 19.5 255 700-970 23-306 (353)
266 3cek_A Dual specificity protei 100.0 4.2E-36 1.4E-40 329.3 17.7 252 700-970 27-293 (313)
267 2i6l_A Mitogen-activated prote 100.0 5.4E-36 1.8E-40 329.8 18.2 260 700-970 10-306 (320)
268 3qa8_A MGC80376 protein; kinas 100.0 1.9E-36 6.5E-41 354.3 14.8 263 700-968 13-296 (676)
269 2j0j_A Focal adhesion kinase 1 100.0 4.7E-36 1.6E-40 359.0 18.0 253 700-972 389-647 (656)
270 3fhr_A MAP kinase-activated pr 100.0 2.8E-36 9.5E-41 333.5 14.8 253 700-970 27-288 (336)
271 3o6n_A APL1; leucine-rich repe 100.0 1.1E-35 3.8E-40 336.6 19.1 336 264-619 45-380 (390)
272 3aln_A Dual specificity mitoge 100.0 5.5E-36 1.9E-40 330.6 16.0 257 700-970 21-286 (327)
273 2vx3_A Dual specificity tyrosi 100.0 2.3E-35 8E-40 332.5 20.4 201 699-909 52-261 (382)
274 2rio_A Serine/threonine-protei 100.0 1E-35 3.5E-40 340.5 17.4 251 701-970 15-296 (434)
275 3p23_A Serine/threonine-protei 100.0 1.2E-35 4.1E-40 338.5 17.7 249 700-970 23-284 (432)
276 1q8y_A SR protein kinase; tran 100.0 1E-35 3.4E-40 335.2 16.6 260 700-970 18-334 (373)
277 2dyl_A Dual specificity mitoge 100.0 7.9E-36 2.7E-40 328.2 14.7 254 700-970 24-284 (318)
278 2eu9_A Dual specificity protei 100.0 2.6E-35 8.8E-40 329.5 18.2 259 700-970 18-334 (355)
279 4fmz_A Internalin; leucine ric 100.0 1.6E-34 5.5E-39 321.8 24.5 306 45-397 41-346 (347)
280 3a99_A Proto-oncogene serine/t 100.0 3.5E-36 1.2E-40 330.7 10.4 246 698-970 40-294 (320)
281 2iwi_A Serine/threonine-protei 100.0 1.5E-35 5E-40 324.9 15.0 248 696-970 26-284 (312)
282 3oja_B Anopheles plasmodium-re 100.0 3.3E-35 1.1E-39 351.1 18.7 333 267-619 54-386 (597)
283 4fmz_A Internalin; leucine ric 100.0 6.4E-34 2.2E-38 316.9 27.4 308 19-349 39-346 (347)
284 3o6n_A APL1; leucine-rich repe 100.0 3.4E-34 1.2E-38 324.4 24.1 308 72-422 45-353 (390)
285 3uqc_A Probable conserved tran 100.0 6.8E-35 2.3E-39 314.0 16.3 230 701-972 31-261 (286)
286 2ft3_A Biglycan; proteoglycan, 100.0 1.6E-33 5.6E-38 311.2 23.8 304 8-347 12-331 (332)
287 2ft3_A Biglycan; proteoglycan, 100.0 2.7E-33 9.3E-38 309.4 25.2 293 2-323 35-331 (332)
288 3oja_B Anopheles plasmodium-re 100.0 8E-34 2.7E-38 339.1 22.0 310 71-422 50-359 (597)
289 3m2w_A MAP kinase-activated pr 100.0 5.7E-34 1.9E-38 310.0 17.4 232 700-970 16-257 (299)
290 1xku_A Decorin; proteoglycan, 100.0 4.4E-33 1.5E-37 307.6 24.7 289 25-323 32-330 (330)
291 2pzi_A Probable serine/threoni 100.0 3.5E-34 1.2E-38 346.9 16.2 235 700-969 79-321 (681)
292 3dzo_A Rhoptry kinase domain; 100.0 3.6E-34 1.2E-38 325.4 14.4 245 700-969 77-363 (413)
293 1ogq_A PGIP-2, polygalacturona 100.0 3.2E-34 1.1E-38 313.3 12.4 249 24-275 50-302 (313)
294 1xku_A Decorin; proteoglycan, 100.0 1.5E-32 5.2E-37 303.2 24.3 289 49-347 32-330 (330)
295 2vuw_A Serine/threonine-protei 100.0 3.2E-34 1.1E-38 317.6 10.0 245 700-968 19-329 (336)
296 1ogq_A PGIP-2, polygalacturona 100.0 1.9E-33 6.6E-38 307.1 14.1 246 3-251 53-302 (313)
297 1z7x_W Ribonuclease inhibitor; 100.0 5.7E-36 1.9E-40 347.6 -12.1 381 167-568 2-442 (461)
298 1z7x_W Ribonuclease inhibitor; 100.0 1.5E-35 5.1E-40 344.0 -12.8 355 48-421 3-411 (461)
299 2z66_A Variable lymphocyte rec 100.0 3.8E-30 1.3E-34 280.8 17.1 248 3-254 10-262 (306)
300 4fcg_A Uncharacterized protein 100.0 1.1E-29 3.7E-34 279.1 18.2 227 23-254 80-315 (328)
301 3ogk_B Coronatine-insensitive 100.0 4.5E-32 1.6E-36 325.3 -1.0 399 166-587 110-548 (592)
302 2z80_A TOLL-like receptor 2, v 100.0 8.4E-30 2.9E-34 284.0 16.9 280 51-374 34-315 (353)
303 2z80_A TOLL-like receptor 2, v 100.0 6.6E-30 2.2E-34 284.9 14.8 274 5-303 36-316 (353)
304 1ozn_A Reticulon 4 receptor; N 100.0 3.7E-29 1.3E-33 269.8 20.1 255 3-261 14-269 (285)
305 3ogk_B Coronatine-insensitive 100.0 6.3E-32 2.2E-36 324.0 -3.4 395 70-490 110-547 (592)
306 2z66_A Variable lymphocyte rec 100.0 1.9E-29 6.5E-34 275.3 16.4 246 26-276 9-260 (306)
307 4fcg_A Uncharacterized protein 100.0 6.2E-29 2.1E-33 273.0 19.9 226 47-277 80-314 (328)
308 3zyi_A Leucine-rich repeat-con 100.0 1E-28 3.5E-33 284.9 21.9 245 4-253 58-303 (452)
309 3zyj_A Leucine-rich repeat-con 100.0 1.1E-28 3.6E-33 283.7 21.8 244 4-252 47-291 (440)
310 1ozn_A Reticulon 4 receptor; N 100.0 1.6E-28 5.3E-33 265.0 18.9 226 26-254 13-239 (285)
311 3zyj_A Leucine-rich repeat-con 100.0 5.1E-28 1.8E-32 278.0 21.1 237 25-266 44-281 (440)
312 3zyi_A Leucine-rich repeat-con 100.0 5.9E-28 2E-32 278.5 20.8 236 26-266 56-292 (452)
313 1wwl_A Monocyte differentiatio 100.0 1.8E-29 6E-34 275.8 4.5 249 20-278 39-310 (312)
314 3g06_A SSPH2 (leucine-rich rep 100.0 2.7E-27 9.1E-32 279.4 23.1 267 2-336 42-308 (622)
315 3g06_A SSPH2 (leucine-rich rep 99.9 5.2E-27 1.8E-31 276.9 24.5 267 25-383 41-307 (622)
316 3o53_A Protein LRIM1, AGAP0063 99.9 1.5E-28 5.1E-33 269.2 6.0 256 27-296 13-270 (317)
317 4azs_A Methyltransferase WBDD; 99.9 1.4E-28 4.8E-33 288.6 5.7 188 708-905 241-437 (569)
318 3o53_A Protein LRIM1, AGAP0063 99.9 3.2E-28 1.1E-32 266.5 6.9 267 98-402 12-281 (317)
319 1wwl_A Monocyte differentiatio 99.9 8.7E-28 3E-32 262.4 9.0 248 141-421 40-309 (312)
320 2p1m_B Transport inhibitor res 99.9 7.9E-30 2.7E-34 306.0 -9.5 438 124-588 47-542 (594)
321 2p1m_B Transport inhibitor res 99.9 8.6E-30 2.9E-34 305.7 -9.7 435 99-564 46-542 (594)
322 3oja_A Leucine-rich immune mol 99.9 2.5E-27 8.7E-32 274.5 8.6 245 15-296 21-270 (487)
323 2z62_A TOLL-like receptor 4, v 99.9 8.9E-26 3E-30 242.1 19.8 222 4-229 11-237 (276)
324 2z62_A TOLL-like receptor 4, v 99.9 2.1E-25 7.1E-30 239.2 18.6 224 27-254 10-238 (276)
325 3oja_A Leucine-rich immune mol 99.9 1.9E-26 6.5E-31 267.1 10.9 233 2-248 36-270 (487)
326 2o6q_A Variable lymphocyte rec 99.9 2.1E-24 7.3E-29 230.3 22.0 204 25-231 17-220 (270)
327 3rfs_A Internalin B, repeat mo 99.9 2.7E-25 9.2E-30 237.5 13.9 230 24-266 19-248 (272)
328 2o6q_A Variable lymphocyte rec 99.9 2.9E-24 1E-28 229.2 22.0 204 48-254 16-219 (270)
329 1p9a_G Platelet glycoprotein I 99.9 3.4E-24 1.1E-28 230.7 19.0 206 19-231 5-210 (290)
330 1p9a_G Platelet glycoprotein I 99.9 2.8E-24 9.6E-29 231.3 18.1 204 43-253 5-208 (290)
331 3rfs_A Internalin B, repeat mo 99.9 6.9E-25 2.4E-29 234.3 12.6 225 5-242 24-248 (272)
332 3goz_A Leucine-rich repeat-con 99.9 7.8E-26 2.7E-30 252.5 1.9 106 293-398 3-123 (362)
333 3en9_A Glycoprotease, O-sialog 99.9 7E-25 2.4E-29 255.9 9.2 187 704-907 339-539 (540)
334 3goz_A Leucine-rich repeat-con 99.9 1.4E-25 4.7E-30 250.5 3.1 255 317-591 3-298 (362)
335 2xwt_C Thyrotropin receptor; s 99.9 5.7E-24 1.9E-28 222.7 13.6 196 49-250 32-236 (239)
336 2ast_B S-phase kinase-associat 99.9 3.2E-25 1.1E-29 245.4 2.7 253 2-262 49-315 (336)
337 2xwt_C Thyrotropin receptor; s 99.9 7.1E-24 2.4E-28 221.9 12.8 196 25-226 32-236 (239)
338 4glp_A Monocyte differentiatio 99.9 3.4E-23 1.2E-27 225.8 14.4 225 24-254 64-308 (310)
339 3m19_A Variable lymphocyte rec 99.9 2.5E-22 8.6E-27 211.7 20.0 176 3-181 17-192 (251)
340 1h6u_A Internalin H; cell adhe 99.9 5.7E-23 2E-27 223.4 15.3 192 22-253 39-230 (308)
341 4glp_A Monocyte differentiatio 99.9 3.5E-23 1.2E-27 225.7 13.5 223 2-230 66-308 (310)
342 2ca6_A RAN GTPase-activating p 99.9 1.9E-25 6.4E-30 252.1 -5.3 93 304-396 24-134 (386)
343 4ay9_X Follicle-stimulating ho 99.9 1E-22 3.5E-27 225.9 16.1 216 4-246 13-232 (350)
344 4ay9_X Follicle-stimulating ho 99.9 1.3E-22 4.4E-27 225.2 16.3 239 51-297 12-255 (350)
345 1h6u_A Internalin H; cell adhe 99.9 2.1E-22 7.3E-27 218.8 17.6 191 2-208 43-233 (308)
346 3m19_A Variable lymphocyte rec 99.9 5.5E-22 1.9E-26 209.1 18.9 180 25-231 15-194 (251)
347 2ca6_A RAN GTPase-activating p 99.9 1.5E-24 5.2E-29 244.6 -2.7 261 160-440 24-337 (386)
348 2ast_B S-phase kinase-associat 99.9 5.5E-24 1.9E-28 235.4 1.0 252 25-310 48-315 (336)
349 1zar_A RIO2 kinase; serine kin 99.9 4.2E-22 1.4E-26 212.7 10.4 154 695-879 84-252 (282)
350 2o6s_A Variable lymphocyte rec 99.9 5.2E-21 1.8E-25 195.4 17.7 181 3-193 10-190 (208)
351 3cvr_A Invasion plasmid antige 99.8 1.1E-20 3.9E-25 220.0 16.2 189 25-241 60-255 (571)
352 2o6s_A Variable lymphocyte rec 99.8 3.1E-20 1.1E-24 189.6 16.8 180 27-216 10-189 (208)
353 3cvr_A Invasion plasmid antige 99.8 3.1E-20 1.1E-24 216.2 15.8 189 49-265 60-255 (571)
354 1h6t_A Internalin B; cell adhe 99.8 3.1E-20 1.1E-24 199.9 13.6 172 45-230 43-214 (291)
355 1h6t_A Internalin B; cell adhe 99.8 1.9E-20 6.4E-25 201.6 11.8 192 5-212 29-220 (291)
356 1m9s_A Internalin B; cell inva 99.8 2.5E-20 8.6E-25 219.7 12.1 193 24-232 21-213 (605)
357 1m9s_A Internalin B; cell inva 99.8 6.4E-20 2.2E-24 216.3 14.2 202 4-221 25-226 (605)
358 2v70_A SLIT-2, SLIT homolog 2 99.8 1.6E-19 5.6E-24 185.5 14.9 151 28-181 15-166 (220)
359 2v9t_B SLIT homolog 2 protein 99.8 2.1E-19 7.2E-24 184.7 15.4 152 27-181 14-165 (220)
360 2xot_A Amphoterin-induced prot 99.8 9.4E-20 3.2E-24 202.9 13.8 176 27-205 21-202 (361)
361 2xot_A Amphoterin-induced prot 99.8 9.8E-20 3.3E-24 202.8 12.1 175 76-253 22-202 (361)
362 3e6j_A Variable lymphocyte rec 99.8 8.1E-19 2.8E-23 181.6 17.1 152 27-182 22-173 (229)
363 2v9t_B SLIT homolog 2 protein 99.8 5.3E-19 1.8E-23 181.7 15.2 151 4-157 15-165 (220)
364 1xeu_A Internalin C; cellular 99.8 1.3E-19 4.4E-24 191.8 9.3 172 22-208 17-188 (263)
365 3sb4_A Hypothetical leucine ri 99.8 9.5E-20 3.3E-24 200.2 8.4 221 191-415 100-328 (329)
366 2v70_A SLIT-2, SLIT homolog 2 99.8 6.3E-19 2.1E-23 181.2 13.5 131 99-229 35-166 (220)
367 1dce_A Protein (RAB geranylger 99.8 2.3E-21 7.9E-26 227.3 -6.3 190 45-257 346-550 (567)
368 3e6j_A Variable lymphocyte rec 99.8 2.4E-18 8.2E-23 178.1 16.8 152 3-158 22-173 (229)
369 1xeu_A Internalin C; cellular 99.8 1.8E-19 6.2E-24 190.7 7.9 171 46-231 17-187 (263)
370 1dce_A Protein (RAB geranylger 99.8 3.4E-21 1.2E-25 225.8 -7.1 203 21-246 346-566 (567)
371 3sb4_A Hypothetical leucine ri 99.8 1.8E-19 6.1E-24 198.1 5.7 221 167-391 100-328 (329)
372 4ezg_A Putative uncharacterize 99.8 1.4E-18 4.9E-23 175.4 11.9 154 20-181 40-194 (197)
373 4ezg_A Putative uncharacterize 99.8 1E-18 3.4E-23 176.5 10.6 152 45-204 41-193 (197)
374 4b8c_D Glucose-repressible alc 99.8 1.9E-19 6.6E-24 217.9 6.2 186 57-253 210-404 (727)
375 4b8c_D Glucose-repressible alc 99.7 7.7E-19 2.6E-23 212.6 6.0 151 79-234 208-359 (727)
376 1zth_A RIO1 serine protein kin 99.7 5.6E-18 1.9E-22 178.6 9.5 140 702-856 48-219 (258)
377 1w8a_A SLIT protein; signaling 99.7 1.8E-17 6.1E-22 166.4 12.6 130 3-135 11-141 (192)
378 4fdw_A Leucine rich hypothetic 99.7 8.6E-17 3E-21 180.2 14.6 265 144-445 113-382 (401)
379 1w8a_A SLIT protein; signaling 99.7 6.4E-17 2.2E-21 162.3 11.8 131 27-160 11-142 (192)
380 4fdw_A Leucine rich hypothetic 99.7 1.6E-16 5.3E-21 178.1 15.4 268 117-421 110-383 (401)
381 2ell_A Acidic leucine-rich nuc 99.7 1.4E-16 4.8E-21 156.3 11.5 133 22-157 22-160 (168)
382 2ell_A Acidic leucine-rich nuc 99.7 1.1E-16 3.8E-21 157.0 9.7 133 2-139 26-165 (168)
383 2wfh_A SLIT homolog 2 protein 99.7 6E-16 2E-20 155.1 14.3 127 27-157 13-139 (193)
384 4fs7_A Uncharacterized protein 99.6 2.7E-15 9.4E-20 169.0 19.4 315 36-367 59-373 (394)
385 4fs7_A Uncharacterized protein 99.6 1.3E-15 4.4E-20 171.7 16.3 62 185-248 64-125 (394)
386 2je0_A Acidic leucine-rich nuc 99.6 3E-16 1E-20 150.4 8.9 128 23-152 16-148 (149)
387 2wfh_A SLIT homolog 2 protein 99.6 1E-15 3.5E-20 153.4 12.9 126 52-181 14-139 (193)
388 2o6r_A Variable lymphocyte rec 99.6 2E-15 6.9E-20 149.3 14.7 127 4-133 11-137 (177)
389 2je0_A Acidic leucine-rich nuc 99.6 2.7E-16 9.2E-21 150.8 7.7 126 2-129 19-149 (149)
390 4gyi_A RIO2 kinase; protein ki 99.6 3.6E-16 1.2E-20 170.1 7.2 143 701-857 95-266 (397)
391 2o6r_A Variable lymphocyte rec 99.6 5.2E-15 1.8E-19 146.4 13.7 130 26-158 9-138 (177)
392 1ds9_A Outer arm dynein; leuci 99.6 2.3E-17 7.9E-22 166.6 -6.9 153 22-181 16-185 (198)
393 1ds9_A Outer arm dynein; leuci 99.6 4E-17 1.4E-21 164.9 -5.8 133 44-181 14-153 (198)
394 1a9n_A U2A', U2A'; complex (nu 99.6 5.6E-15 1.9E-19 145.9 9.2 134 18-157 13-153 (176)
395 1a9n_A U2A', U2A'; complex (nu 99.5 5.7E-15 1.9E-19 145.9 7.8 132 68-205 15-153 (176)
396 3g39_A Variable lymphocyte rec 99.5 1.8E-13 6E-18 134.0 12.5 106 26-134 11-116 (170)
397 2r9u_A Variable lymphocyte rec 99.5 1.2E-13 4.1E-18 135.6 11.0 104 27-133 15-118 (174)
398 3g39_A Variable lymphocyte rec 99.5 2.8E-13 9.6E-18 132.6 12.5 104 3-109 12-115 (170)
399 2r9u_A Variable lymphocyte rec 99.4 3.1E-13 1.1E-17 132.6 12.1 104 51-157 15-118 (174)
400 4gt6_A Cell surface protein; l 99.4 1.8E-12 6.3E-17 145.8 19.4 131 281-418 258-388 (394)
401 4gt6_A Cell surface protein; l 99.4 1.2E-12 4E-17 147.4 17.0 316 186-564 57-389 (394)
402 3un9_A NLR family member X1; l 99.4 8.5E-16 2.9E-20 170.4 -8.9 97 480-576 154-262 (372)
403 3un9_A NLR family member X1; l 99.4 4.1E-15 1.4E-19 164.9 -4.5 112 480-591 125-253 (372)
404 2ifg_A High affinity nerve gro 99.3 1.2E-11 4.2E-16 136.6 11.1 103 28-133 12-116 (347)
405 2ifg_A High affinity nerve gro 99.2 1.4E-11 4.9E-16 136.1 10.5 104 4-110 12-117 (347)
406 4h09_A Hypothetical leucine ri 99.2 1.8E-10 6.2E-15 128.8 19.4 150 207-385 208-357 (379)
407 4h09_A Hypothetical leucine ri 99.2 2.9E-10 1E-14 127.1 18.5 131 283-417 212-342 (379)
408 3tm0_A Aminoglycoside 3'-phosp 99.2 7.3E-11 2.5E-15 124.7 10.6 146 697-854 10-212 (263)
409 1nd4_A Aminoglycoside 3'-phosp 99.0 3E-10 1E-14 119.9 7.0 137 701-854 20-213 (264)
410 2ra8_A Uncharacterized protein 99.0 1.7E-10 5.7E-15 126.5 3.6 151 433-588 172-341 (362)
411 2ra8_A Uncharacterized protein 98.9 2.1E-10 7.1E-15 125.8 2.4 84 480-564 251-341 (362)
412 3dxp_A Putative acyl-COA dehyd 98.9 2.6E-09 9E-14 118.3 11.2 144 704-855 41-248 (359)
413 3sg8_A APH(2'')-ID; antibiotic 98.8 1.9E-09 6.7E-14 116.3 4.1 186 706-907 25-288 (304)
414 1io0_A Tropomodulin; LRR prote 98.7 2.2E-09 7.4E-14 106.2 -0.4 91 454-544 33-138 (185)
415 1io0_A Tropomodulin; LRR prote 98.6 1.8E-09 6.3E-14 106.7 -2.1 115 475-589 30-163 (185)
416 3r70_A Aminoglycoside phosphot 98.5 3.7E-07 1.3E-11 99.0 12.8 138 702-857 38-239 (320)
417 3rw6_A Nuclear RNA export fact 98.4 3.6E-08 1.2E-12 102.1 -0.8 80 69-150 167-257 (267)
418 3rw6_A Nuclear RNA export fact 98.4 1.1E-07 3.8E-12 98.5 2.6 106 477-584 137-258 (267)
419 4gkh_A Aminoglycoside 3'-phosp 98.3 2.3E-06 7.8E-11 90.4 11.8 135 707-854 30-222 (272)
420 3e4g_A ATP synthase subunit S, 98.3 1.2E-07 4.1E-12 90.8 0.8 87 481-567 61-154 (176)
421 3e4g_A ATP synthase subunit S, 98.2 3.8E-07 1.3E-11 87.3 2.9 84 505-588 61-150 (176)
422 3d1u_A Putative fructosamine-3 98.2 3.9E-06 1.3E-10 88.9 10.7 78 703-787 17-97 (288)
423 3tdw_A Gentamicin resistance p 98.2 7.6E-06 2.6E-10 87.9 11.9 137 706-856 24-225 (306)
424 3ovc_A Hygromycin-B 4-O-kinase 98.1 7.1E-06 2.4E-10 90.2 10.8 145 703-856 43-244 (362)
425 3ats_A Putative uncharacterize 98.0 8.1E-06 2.8E-10 90.0 7.1 84 706-789 25-122 (357)
426 1pgv_A TMD-1, tropomodulin TMD 97.9 1.4E-06 4.9E-11 85.0 0.7 109 480-588 40-168 (197)
427 1pgv_A TMD-1, tropomodulin TMD 97.9 1.4E-06 4.9E-11 85.0 -0.1 84 458-541 71-169 (197)
428 2olc_A MTR kinase, methylthior 97.7 5.7E-05 1.9E-09 84.5 9.3 78 706-785 35-120 (397)
429 2q83_A YTAA protein; 2635576, 97.7 7.3E-05 2.5E-09 81.8 9.4 140 707-854 38-251 (346)
430 3jr1_A Putative fructosamine-3 97.7 0.00019 6.5E-09 76.5 11.5 139 705-851 40-232 (312)
431 2pyw_A Uncharacterized protein 97.5 0.00031 1.1E-08 79.0 11.1 76 825-902 232-312 (420)
432 3f7w_A Putative fructosamine-3 97.4 0.00055 1.9E-08 72.6 10.3 80 701-787 15-97 (288)
433 3csv_A Aminoglycoside phosphot 97.1 0.0011 3.6E-08 72.0 9.7 143 706-856 23-218 (333)
434 1zyl_A Hypothetical protein YI 97.1 0.0041 1.4E-07 67.1 14.4 159 690-855 10-223 (328)
435 2ppq_A HSK, HK, homoserine kin 96.9 0.0058 2E-07 65.7 13.2 158 691-854 7-216 (322)
436 3dxq_A Choline/ethanolamine ki 96.9 0.0019 6.4E-08 68.9 8.5 71 706-787 23-95 (301)
437 3feg_A Choline/ethanolamine ki 96.8 0.0033 1.1E-07 68.8 9.6 142 706-855 55-254 (379)
438 1nw1_A Choline kinase (49.2 KD 96.7 0.0019 6.6E-08 72.4 7.1 73 706-787 78-159 (429)
439 3rfe_A Platelet glycoprotein I 96.5 0.0038 1.3E-07 56.8 6.3 56 76-133 12-68 (130)
440 2qg7_A Ethanolamine kinase PV0 96.4 0.0065 2.2E-07 68.4 9.0 74 706-787 113-188 (458)
441 2yle_A Protein spire homolog 1 96.4 0.0083 2.8E-07 58.6 8.2 103 785-905 33-135 (229)
442 3i1a_A Spectinomycin phosphotr 96.2 0.029 1E-06 60.6 12.6 32 825-856 206-237 (339)
443 3rfe_A Platelet glycoprotein I 96.1 0.0055 1.9E-07 55.7 5.4 37 193-229 32-68 (130)
444 3c5i_A Choline kinase; choline 96.0 0.0084 2.9E-07 65.9 7.0 74 706-787 38-121 (369)
445 3f2s_A CK, chetk-alpha, cholin 95.5 0.029 9.9E-07 61.6 8.5 146 706-855 57-280 (401)
446 3mes_A Choline kinase; malaria 94.2 0.08 2.7E-06 58.7 7.8 74 706-787 75-157 (424)
447 3g15_A CK, chetk-alpha, cholin 91.8 0.23 7.8E-06 54.9 7.1 29 827-855 246-280 (401)
448 4ann_A ESSB; membrane protein, 85.4 1.7 5.7E-05 42.5 7.2 116 758-907 43-158 (215)
449 4ano_A ESSB; membrane protein, 79.5 5.5 0.00019 39.0 8.3 115 758-907 48-163 (219)
450 2ks1_B Epidermal growth factor 79.4 0.5 1.7E-05 32.8 0.6 22 644-665 18-39 (44)
451 2l2t_A Receptor tyrosine-prote 77.5 0.54 1.8E-05 32.6 0.3 21 645-665 18-38 (44)
452 3cxl_A N-chimerin; SH2, RHO-GA 76.7 0.35 1.2E-05 54.4 -1.3 63 704-770 145-214 (463)
453 2jwa_A Receptor tyrosine-prote 62.6 2.1 7.3E-05 29.5 0.7 6 643-648 17-22 (44)
454 2k9y_A Ephrin type-A receptor 61.8 2.7 9.2E-05 28.8 1.1 23 640-662 16-38 (41)
455 2lz0_A Uncharacterized protein 57.0 13 0.00045 31.3 4.8 47 203-250 7-53 (100)
456 2lz0_A Uncharacterized protein 51.6 24 0.00083 29.6 5.6 40 328-368 12-51 (100)
457 2l8s_A Integrin alpha-1; trans 51.0 2.3 8E-05 30.7 -0.7 22 636-657 9-30 (54)
458 1cja_A Protein (actin-fragmin 44.3 96 0.0033 32.3 9.7 142 703-855 71-237 (342)
459 2ks1_B Epidermal growth factor 42.2 5.3 0.00018 27.7 0.0 34 633-666 10-43 (44)
460 1iij_A ERBB-2 receptor protein 39.1 5.6 0.00019 25.9 -0.2 23 642-664 12-34 (35)
461 3ls8_A Phosphatidylinositol 3- 36.8 2.6E+02 0.009 31.8 12.7 84 763-854 402-501 (614)
462 2knc_A Integrin alpha-IIB; tra 31.9 9.3 0.00032 27.8 -0.1 23 635-657 11-33 (54)
463 2k1a_A Integrin alpha-IIB; sin 27.5 13 0.00043 25.5 -0.0 23 635-657 9-31 (42)
464 2l6w_A Beta-type platelet-deri 32.9 13 0.00046 24.6 0.0 9 655-663 26-34 (39)
465 3hhm_A Phosphatidylinositol-4, 26.0 3.1E+02 0.01 33.7 11.4 25 830-854 937-961 (1091)
466 1zza_A Stannin, AG8_1; helix, 24.7 38 0.0013 25.7 2.1 17 647-663 24-40 (90)
467 2x6h_A GH13170P, VPS34, phosph 22.7 6.3E+02 0.022 29.2 12.8 25 830-854 551-575 (696)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=2e-78 Score=746.14 Aligned_cols=616 Identities=33% Similarity=0.464 Sum_probs=462.2
Q ss_pred CcEEeCCCCCCCCC---CCcccCCCCCCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCC--cccCCCCCcE
Q 002069 2 LKVLGLSFNQFSGS---IPPEIGHLTHLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPP--SLGNLTSLIY 76 (973)
Q Consensus 2 l~~L~l~~~~l~~~---~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~--~~~~l~~L~~ 76 (973)
++.|||+++.++|. +|++++.|++|+.++++.|.+. .+|..|+++++|++|+|++|.+.+.+|. .++++++|++
T Consensus 52 v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l~~~~~~~~-~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~ 130 (768)
T 3rgz_A 52 VTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSNSHIN-GSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKF 130 (768)
T ss_dssp EEEEECTTSCCCEEHHHHHHHTTTCTTCCEEECTTSCEE-ECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCE
T ss_pred EEEEECCCCCcCCccCccChhHhccCcccccCCcCCCcC-CCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCE
Confidence 46788888888877 7777777777777777777765 3566777777777777777777766776 7777777777
Q ss_pred EEccCCcCcccCCccc-cCccccceeeccCCcCCCCCCCc---cccCCccceeecccccccccCcccccccCCCCceecc
Q 002069 77 IDIGNNLLSGSIPNEV-GSLKSLSDLRLSNNSLNGSIPSS---LGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVS 152 (973)
Q Consensus 77 L~l~~n~l~~~~p~~~-~~l~~L~~L~L~~n~l~~~~p~~---~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~ 152 (973)
|+|++|.+++..|..+ .++++|++|+|++|++++..|.. +.++++|++|++++|.+++..|. +++++|++|+++
T Consensus 131 L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls 208 (768)
T 3rgz_A 131 LNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDV--SRCVNLEFLDVS 208 (768)
T ss_dssp EECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC--TTCTTCCEEECC
T ss_pred EECcCCccCCcCCHHHhccCCCCCEEECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCc--ccCCcCCEEECc
Confidence 7777777776666655 66777777777777777665555 66777777777777777654443 667777777777
Q ss_pred cCCCCCCCCccccCccccceeeecccccCCCCCccccccCccceeeccccccccccccccCCCCcccEEecCCcccCCCC
Q 002069 153 YNTLSGAIPFSLGNLTNLVTLYIGINALSGSIPNEIGNLKSLSDLRLDYNTLSGSILYSFGNLTKLEILYLDVNALSGLI 232 (973)
Q Consensus 153 ~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~ 232 (973)
+|.+++.+|. ++++++|++|++++|++++.+|..+.++++|++|++++|++.+..+.. .+++|++|++++|++++..
T Consensus 209 ~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~i 285 (768)
T 3rgz_A 209 SNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEI 285 (768)
T ss_dssp SSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEESC
T ss_pred CCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCCcc
Confidence 7777765655 777777777777777777667777777777777777777776544433 6677777777777777656
Q ss_pred Ccccccc-ccccceecccccccCCCCcccCCcchhhhccCCCcccC-chhhhhhccccccceEEcccccccCCcCchhhc
Q 002069 233 PNEIGNL-KSLLALQLNYNTLSGSIPCSFGNLTKLVISCLGTNALS-SSILEEIGNLKSLLHLQLNYNTLSGSIPLSLGS 310 (973)
Q Consensus 233 ~~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~n~i~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 310 (973)
|..+.+. ++|++|+|++|++++..|..|+++++|+.|++++|.+. .++.+.+..+++|++|++++|++++.+|..+..
T Consensus 286 p~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~ 365 (768)
T 3rgz_A 286 PDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTN 365 (768)
T ss_dssp CCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHH
T ss_pred CHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHh
Confidence 6666554 77777777777777777777777777777777777776 333444777777777777777777666777766
Q ss_pred CC-ccceeeccccccCCCCCccccC--CCCCCcEEcCCCCCCCcchhccCCCCCCcEEEccCCcccCCCCcccccccccc
Q 002069 311 LT-NLATLYFSTNALSGSIPNEITN--LRSLSDLQLSENTLNGSIPLALGNLTKLVSLDLSINKLSGSIPLSFASLTSLT 387 (973)
Q Consensus 311 l~-~L~~L~L~~n~l~~~~~~~~~~--l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~ 387 (973)
++ +|++|++++|.+++..|..+.. +++|++|++++|.+++.+|..++++++|++|+|++|++++..|..|..+++|+
T Consensus 366 l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 445 (768)
T 3rgz_A 366 LSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLR 445 (768)
T ss_dssp HTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCC
T ss_pred hhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCC
Confidence 65 6777777777776666666655 66677777777777666666777777777777777777766677777777777
Q ss_pred hhcccccccccCCCcccCCCCCCCEEEccCCCCCCCcchhhhhhcccceEEEeeCcccccccCCCCCCCcccceeeccCC
Q 002069 388 TLYLYENSLCDSIPKEIGDMKSLSILDLSSNKLNGSIPLSLANLTNSLKVLYLSSNHIVGEIPLGHGKFSSLIQLILNNN 467 (973)
Q Consensus 388 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~N 467 (973)
.|++++|++++..|..+..+++|++|++++|++++.+|..+..+. +|++|+|++|++++.+|..++.+++|++|++++|
T Consensus 446 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 524 (768)
T 3rgz_A 446 DLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCT-NLNWISLSNNRLTGEIPKWIGRLENLAILKLSNN 524 (768)
T ss_dssp EEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCT-TCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSS
T ss_pred EEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCC-CCCEEEccCCccCCcCChHHhcCCCCCEEECCCC
Confidence 777777777666677777777777777777777766666666554 5777777777777666666667777777777777
Q ss_pred ccCCCCCcccccccccccccccccccccccCc------------------------------------------------
Q 002069 468 ELSGQLSPELGSLNQLEYLDLSANTFHNSIPE------------------------------------------------ 499 (973)
Q Consensus 468 ~l~~~~~~~l~~l~~L~~L~Ls~N~i~~~~~~------------------------------------------------ 499 (973)
++++.+|..+..+++|++||+++|++++.+|.
T Consensus 525 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 604 (768)
T 3rgz_A 525 SFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQL 604 (768)
T ss_dssp CCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGG
T ss_pred cccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhh
Confidence 77666667777777777777777766655443
Q ss_pred ----------------------cccccccccEEeecCccCCCCCCcccccccccCeecccccccCCCcchhhcccccccc
Q 002069 500 ----------------------SLGNLVKLHYLNLSNNQFSQKIPNPIEKLIHLSELDLSYKIFGEEIPSQVCSMQSLEK 557 (973)
Q Consensus 500 ----------------------~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~i~~~~~~~~~~l~~L~~ 557 (973)
.+..+++|++|+|++|++++.+|..+..++.|+.|+|++|.+++.+|..++.+++|+.
T Consensus 605 ~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~ 684 (768)
T 3rgz_A 605 NRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNI 684 (768)
T ss_dssp GGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCE
T ss_pred hccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCE
Confidence 4455678999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccCccchhhhccccccEEeCcCCCCCCCCCCCccCCCCCcchhcCCCCccCCCccCCCCccc
Q 002069 558 LNLSHNNLSGSISRCFEEMHWLSCIDISYNALQGLIPNSTAFRDAPMLALQGNKRLCGDIKRLPPCKAF 626 (973)
Q Consensus 558 L~L~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~N~~~c~~~~~l~~~~~~ 626 (973)
|||++|+++|.+|..+..++.|++||+++|+++|.+|...+|..++..++.|||++||.+. ++|...
T Consensus 685 LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l--~~C~~~ 751 (768)
T 3rgz_A 685 LDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPL--PRCDPS 751 (768)
T ss_dssp EECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTS--CCCCSC
T ss_pred EECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCC--cCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999874 477643
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=7.3e-72 Score=687.65 Aligned_cols=579 Identities=33% Similarity=0.443 Sum_probs=460.5
Q ss_pred CcEEeCCCCCCCCCCCcccCCCCCCCEEECCCCcccccCCc--CccCCCCCCeeeccCCcCCCCCCCcc-cCCCCCcEEE
Q 002069 2 LKVLGLSFNQFSGSIPPEIGHLTHLKLLSFSKNQLSGLIPH--EIGRLSSLNGLSLYSNFLKGSIPPSL-GNLTSLIYID 78 (973)
Q Consensus 2 l~~L~l~~~~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~--~~~~l~~L~~L~l~~n~~~~~~p~~~-~~l~~L~~L~ 78 (973)
|+.++++.+++. .+|+.++.+++|++|||++|.+++.+|. .++++++|++|+|++|.+.+.+|..+ .++++|++|+
T Consensus 79 L~~l~~~~~~~~-~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~ 157 (768)
T 3rgz_A 79 LESLFLSNSHIN-GSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLD 157 (768)
T ss_dssp CCEEECTTSCEE-ECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEE
T ss_pred ccccCCcCCCcC-CCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEE
Confidence 566677777665 5667888888888888888888877777 78888888888888888887777765 7788888888
Q ss_pred ccCCcCcccCCcc---ccCccccceeeccCCcCCCCCCCccccCCccceeecccccccccCcccccccCCCCceecccCC
Q 002069 79 IGNNLLSGSIPNE---VGSLKSLSDLRLSNNSLNGSIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNT 155 (973)
Q Consensus 79 l~~n~l~~~~p~~---~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~ 155 (973)
|++|++++..|.. ++++++|++|++++|++.+..| +..+++|++|+|++|++++.+|. ++++++|++|++++|.
T Consensus 158 Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~ 234 (768)
T 3rgz_A 158 LSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVD--VSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNK 234 (768)
T ss_dssp CCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCB--CTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSC
T ss_pred CCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCC--cccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCc
Confidence 8888888777666 6778888888888888876544 37778888888888888766666 8888888888888888
Q ss_pred CCCCCCccccCccccceeeecccccCCCCCccccccCccceeeccccccccccccccCCC-CcccEEecCCcccCCCCCc
Q 002069 156 LSGAIPFSLGNLTNLVTLYIGINALSGSIPNEIGNLKSLSDLRLDYNTLSGSILYSFGNL-TKLEILYLDVNALSGLIPN 234 (973)
Q Consensus 156 l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~L~~n~i~~~~~~ 234 (973)
+++..|..+..+++|++|++++|++.+.+|.. .+++|++|++++|++++..+..+..+ ++|++|++++|.+++..|.
T Consensus 235 l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~ 312 (768)
T 3rgz_A 235 LSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPP 312 (768)
T ss_dssp CCSCHHHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCG
T ss_pred CCCcccHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccch
Confidence 88777788888888888888888887666654 67788888888888876666666554 7888888888888777777
Q ss_pred cccccccccceecccccccCCCCcc-cCCcchhhhccCCCcccCchhhhhhcccc-ccceEEcccccccCCcCchhhc--
Q 002069 235 EIGNLKSLLALQLNYNTLSGSIPCS-FGNLTKLVISCLGTNALSSSILEEIGNLK-SLLHLQLNYNTLSGSIPLSLGS-- 310 (973)
Q Consensus 235 ~~~~l~~L~~L~L~~N~l~~~~~~~-~~~l~~L~~l~l~~n~i~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~-- 310 (973)
.|+++++|++|++++|++++.+|.. |+++++|+.|++++|.+....+..+.+++ +|++|++++|.+++..|..+..
T Consensus 313 ~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~ 392 (768)
T 3rgz_A 313 FFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNP 392 (768)
T ss_dssp GGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCST
T ss_pred HHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcc
Confidence 8888888888888888877555544 77788888888888877766677777776 7888888888777777766665
Q ss_pred CCccceeeccccccCCCCCccccCCCCCCcEEcCCCCCCCcchhccCCCCCCcEEEccCCcccCCCCcccccccccchhc
Q 002069 311 LTNLATLYFSTNALSGSIPNEITNLRSLSDLQLSENTLNGSIPLALGNLTKLVSLDLSINKLSGSIPLSFASLTSLTTLY 390 (973)
Q Consensus 311 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~ 390 (973)
+++|++|++++|.+++.+|..+.++++|++|+|++|.+++..|..++++++|++|++++|++++..|..|..+++|++|+
T Consensus 393 ~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 472 (768)
T 3rgz_A 393 KNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLI 472 (768)
T ss_dssp TCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEE
T ss_pred cCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEE
Confidence 67778888888877777777777777888888888877777777777777788888888877777777777777788888
Q ss_pred ccccccccCCCcccCCCCCCCEEEccCCCCCCCcchhhhhhcccceEEEeeCcccccccCCCCCCCcccceeeccCCccC
Q 002069 391 LYENSLCDSIPKEIGDMKSLSILDLSSNKLNGSIPLSLANLTNSLKVLYLSSNHIVGEIPLGHGKFSSLIQLILNNNELS 470 (973)
Q Consensus 391 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~N~l~ 470 (973)
+++|++++..|..+..+++|++|+|++|++++.+|..+..+. +|++|+|++|++++.+|..++.+++|+.|++++|+++
T Consensus 473 L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 551 (768)
T 3rgz_A 473 LDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLE-NLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFN 551 (768)
T ss_dssp CCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCT-TCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEE
T ss_pred ecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCC-CCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccC
Confidence 888877777777777777788888888877777777777665 6788888888777777777777777888888777776
Q ss_pred CCCCcc----------------------------------------------------------------------cccc
Q 002069 471 GQLSPE----------------------------------------------------------------------LGSL 480 (973)
Q Consensus 471 ~~~~~~----------------------------------------------------------------------l~~l 480 (973)
+.+|.. +..+
T Consensus 552 g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l 631 (768)
T 3rgz_A 552 GTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNN 631 (768)
T ss_dssp SBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSS
T ss_pred CcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhcc
Confidence 555543 4446
Q ss_pred cccccccccccccccccCccccccccccEEeecCccCCCCCCcccccccccCeecccccccCCCcchhhccccccccccc
Q 002069 481 NQLEYLDLSANTFHNSIPESLGNLVKLHYLNLSNNQFSQKIPNPIEKLIHLSELDLSYKIFGEEIPSQVCSMQSLEKLNL 560 (973)
Q Consensus 481 ~~L~~L~Ls~N~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~i~~~~~~~~~~l~~L~~L~L 560 (973)
++|+.|||++|++++.+|..++.+++|+.|+|++|++++.+|..+..+++|+.||||+|++++.+|..+..++.|++|++
T Consensus 632 ~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~l 711 (768)
T 3rgz_A 632 GSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDL 711 (768)
T ss_dssp BCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEEC
T ss_pred ccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEEC
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCccchhhhccccccEEeCcCCC
Q 002069 561 SHNNLSGSISRCFEEMHWLSCIDISYNA 588 (973)
Q Consensus 561 ~~N~l~~~~~~~~~~l~~L~~l~l~~N~ 588 (973)
++|+++|.+|.. ..+..+....+.+|+
T Consensus 712 s~N~l~g~iP~~-~~~~~~~~~~~~gN~ 738 (768)
T 3rgz_A 712 SNNNLSGPIPEM-GQFETFPPAKFLNNP 738 (768)
T ss_dssp CSSEEEEECCSS-SSGGGSCGGGGCSCT
T ss_pred cCCcccccCCCc-hhhccCCHHHhcCCc
Confidence 999999998854 223444555677775
No 3
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1.5e-65 Score=626.53 Aligned_cols=589 Identities=25% Similarity=0.249 Sum_probs=510.2
Q ss_pred cEEeCCCCCCCCCCCcccCCCCCCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCC
Q 002069 3 KVLGLSFNQFSGSIPPEIGHLTHLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNN 82 (973)
Q Consensus 3 ~~L~l~~~~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n 82 (973)
+.+|.++++++ .+|..+. +++++|+|++|.+++..|..|.++++|++|+|++|++++..|.+|+++++|++|+|++|
T Consensus 7 ~~~~cs~~~L~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 83 (680)
T 1ziw_A 7 EVADCSHLKLT-QVPDDLP--TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHN 83 (680)
T ss_dssp SEEECCSSCCS-SCCSCSC--TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSS
T ss_pred CeeECCCCCcc-ccccccC--CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCC
Confidence 46899999998 8998776 89999999999999877778999999999999999999888999999999999999999
Q ss_pred cCcccCCccccCccccceeeccCCcCCCCCCCccccCCccceeecccccccccCcccccccCCCCceecccCCCCCCCCc
Q 002069 83 LLSGSIPNEVGSLKSLSDLRLSNNSLNGSIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSGAIPF 162 (973)
Q Consensus 83 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 162 (973)
++++..+..|+.+++|++|+|++|++++..|..|+++++|++|+|++|.+++..|..|+++++|++|++++|.+++..+.
T Consensus 84 ~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 163 (680)
T 1ziw_A 84 ELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSE 163 (680)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHH
T ss_pred ccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHH
Confidence 99954444799999999999999999977778999999999999999999988889999999999999999999987777
Q ss_pred ccc--CccccceeeecccccCCCCCccccccCccceeeccccccccccccccC---CCCcccEEecCCcccCCCCCcccc
Q 002069 163 SLG--NLTNLVTLYIGINALSGSIPNEIGNLKSLSDLRLDYNTLSGSILYSFG---NLTKLEILYLDVNALSGLIPNEIG 237 (973)
Q Consensus 163 ~l~--~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~---~l~~L~~L~L~~n~i~~~~~~~~~ 237 (973)
.+. .+++|+.|++++|++++..|..+..+++|+.|++++|.+.......+. ..++|+.|++++|.+++..|..|.
T Consensus 164 ~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~ 243 (680)
T 1ziw_A 164 ELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFL 243 (680)
T ss_dssp HHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTG
T ss_pred HhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhh
Confidence 654 568999999999999988999999999999999999987643322221 358899999999999999999999
Q ss_pred cccc--ccceecccccccCCCCcccCCcchhhhccCCCcccCchhhhhhccccccceEEcccccccC-----CcC----c
Q 002069 238 NLKS--LLALQLNYNTLSGSIPCSFGNLTKLVISCLGTNALSSSILEEIGNLKSLLHLQLNYNTLSG-----SIP----L 306 (973)
Q Consensus 238 ~l~~--L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~-----~~~----~ 306 (973)
+++. |+.|++++|++++..|..|+.+++|+.+++++|.+....+..|.++++|++|++++|...+ .+| .
T Consensus 244 ~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~ 323 (680)
T 1ziw_A 244 GLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDF 323 (680)
T ss_dssp GGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTT
T ss_pred ccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChh
Confidence 9876 9999999999998889999999999999999999999888999999999999999876543 122 3
Q ss_pred hhhcCCccceeeccccccCCCCCccccCCCCCCcEEcCCCCCCCc--chhccCCC--CCCcEEEccCCcccCCCCccccc
Q 002069 307 SLGSLTNLATLYFSTNALSGSIPNEITNLRSLSDLQLSENTLNGS--IPLALGNL--TKLVSLDLSINKLSGSIPLSFAS 382 (973)
Q Consensus 307 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~--~~~~~~~l--~~L~~L~Ls~N~i~~~~~~~~~~ 382 (973)
.|..+++|++|++++|.+++..+..|.++++|++|++++|.++.. ....|..+ ++|+.|++++|++++..|.+|..
T Consensus 324 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~ 403 (680)
T 1ziw_A 324 SFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSW 403 (680)
T ss_dssp TTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTT
T ss_pred hcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhC
Confidence 688899999999999999988888899999999999999975422 22334433 58999999999999888889999
Q ss_pred ccccchhcccccccccCCC-cccCCCCCCCEEEccCCCCCCCcchhhhhhcccceEEEeeCcccc--cccCCCCCCCccc
Q 002069 383 LTSLTTLYLYENSLCDSIP-KEIGDMKSLSILDLSSNKLNGSIPLSLANLTNSLKVLYLSSNHIV--GEIPLGHGKFSSL 459 (973)
Q Consensus 383 l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~L~~n~l~--~~~~~~~~~~~~L 459 (973)
+++|+.|++++|++++..+ ..|.++++|++|++++|++++..+..+...+ +|++|++++|.++ +..|..+..+++|
T Consensus 404 l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~-~L~~L~l~~n~l~~~~~~p~~~~~l~~L 482 (680)
T 1ziw_A 404 LGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVP-SLQRLMLRRVALKNVDSSPSPFQPLRNL 482 (680)
T ss_dssp CTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCT-TCCEEECTTSCCBCTTCSSCTTTTCTTC
T ss_pred CCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCc-ccccchhccccccccccCCcccccCCCC
Confidence 9999999999999976554 7888999999999999998866666666554 7999999999887 4677888889999
Q ss_pred ceeeccCCccCCCCCcccccccccccccccccccccccC--------ccccccccccEEeecCccCCCCCCccccccccc
Q 002069 460 IQLILNNNELSGQLSPELGSLNQLEYLDLSANTFHNSIP--------ESLGNLVKLHYLNLSNNQFSQKIPNPIEKLIHL 531 (973)
Q Consensus 460 ~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~i~~~~~--------~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 531 (973)
+.|++++|++++..+..|..+++|++|++++|.+++..+ ..|.++++|++|+|++|+++...+..|.++++|
T Consensus 483 ~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L 562 (680)
T 1ziw_A 483 TILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFEL 562 (680)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred CEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCc
Confidence 999999999998888888999999999999999886422 237788999999999999987776788999999
Q ss_pred CeecccccccCCCcchhhcccccccccccccccccCccchhhh-ccccccEEeCcCCCCCCCCCC
Q 002069 532 SELDLSYKIFGEEIPSQVCSMQSLEKLNLSHNNLSGSISRCFE-EMHWLSCIDISYNALQGLIPN 595 (973)
Q Consensus 532 ~~L~ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~l~l~~N~l~~~~~~ 595 (973)
++|++++|.++...+..|..+++|+.|+|++|++++..+..+. .++.|+.|++++|+|.+.++.
T Consensus 563 ~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 563 KIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred ceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCcc
Confidence 9999999999988888888899999999999999988888887 788999999999999998874
No 4
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=5.8e-65 Score=621.26 Aligned_cols=585 Identities=24% Similarity=0.255 Sum_probs=523.0
Q ss_pred CEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCcccCCccccCccccceeeccCC
Q 002069 27 KLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSLSDLRLSNN 106 (973)
Q Consensus 27 ~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n 106 (973)
+.+|.++++++ .+|..+. +++++|+|++|.+++..|..|+++++|++|+|++|.+++..|..|+++++|++|+|++|
T Consensus 7 ~~~~cs~~~L~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 83 (680)
T 1ziw_A 7 EVADCSHLKLT-QVPDDLP--TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHN 83 (680)
T ss_dssp SEEECCSSCCS-SCCSCSC--TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSS
T ss_pred CeeECCCCCcc-ccccccC--CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCC
Confidence 67999999998 6787776 79999999999999777778999999999999999999888999999999999999999
Q ss_pred cCCCCCCCccccCCccceeecccccccccCcccccccCCCCceecccCCCCCCCCccccCccccceeeecccccCCCCCc
Q 002069 107 SLNGSIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSGAIPFSLGNLTNLVTLYIGINALSGSIPN 186 (973)
Q Consensus 107 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~ 186 (973)
++++..+..|+++++|++|+|++|++++..|..|+++++|++|++++|.+++..|..++++++|++|++++|.+++..+.
T Consensus 84 ~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 163 (680)
T 1ziw_A 84 ELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSE 163 (680)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHH
T ss_pred ccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHH
Confidence 99955455799999999999999999977778999999999999999999989999999999999999999999977776
Q ss_pred ccc--ccCccceeeccccccccccccccCCCCcccEEecCCcccCCCCCcccc---ccccccceecccccccCCCCcccC
Q 002069 187 EIG--NLKSLSDLRLDYNTLSGSILYSFGNLTKLEILYLDVNALSGLIPNEIG---NLKSLLALQLNYNTLSGSIPCSFG 261 (973)
Q Consensus 187 ~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~ 261 (973)
.+. .+++|++|++++|+++++.+..|..+++|+.|++++|.+.......+. ..++|+.|++++|.+++..|.+|.
T Consensus 164 ~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~ 243 (680)
T 1ziw_A 164 ELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFL 243 (680)
T ss_dssp HHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTG
T ss_pred HhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhh
Confidence 654 568999999999999999999999999999999999987532111111 237899999999999999999999
Q ss_pred Ccch--hhhccCCCcccCchhhhhhccccccceEEcccccccCCcCchhhcCCccceeeccccccCC-----CCC----c
Q 002069 262 NLTK--LVISCLGTNALSSSILEEIGNLKSLLHLQLNYNTLSGSIPLSLGSLTNLATLYFSTNALSG-----SIP----N 330 (973)
Q Consensus 262 ~l~~--L~~l~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-----~~~----~ 330 (973)
+++. |+.|++++|.+....+..|+.+++|++|++++|.+++..|..|..+++|+.|++++|...+ .+| .
T Consensus 244 ~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~ 323 (680)
T 1ziw_A 244 GLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDF 323 (680)
T ss_dssp GGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTT
T ss_pred ccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChh
Confidence 9876 9999999999999999999999999999999999999999999999999999999876543 223 2
Q ss_pred cccCCCCCCcEEcCCCCCCCcchhccCCCCCCcEEEccCCccc--CCCCcccccc--cccchhcccccccccCCCcccCC
Q 002069 331 EITNLRSLSDLQLSENTLNGSIPLALGNLTKLVSLDLSINKLS--GSIPLSFASL--TSLTTLYLYENSLCDSIPKEIGD 406 (973)
Q Consensus 331 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~--~~~~~~~~~l--~~L~~L~L~~N~l~~~~~~~~~~ 406 (973)
.|..+++|++|++++|.+++..+..|.++++|++|++++|.+. ......|..+ ++|+.|++++|++++..|.+|..
T Consensus 324 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~ 403 (680)
T 1ziw_A 324 SFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSW 403 (680)
T ss_dssp TTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTT
T ss_pred hcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhC
Confidence 7889999999999999999999999999999999999999864 2334455544 58999999999999999999999
Q ss_pred CCCCCEEEccCCCCCCCcch-hhhhhcccceEEEeeCcccccccCCCCCCCcccceeeccCCccC--CCCCccccccccc
Q 002069 407 MKSLSILDLSSNKLNGSIPL-SLANLTNSLKVLYLSSNHIVGEIPLGHGKFSSLIQLILNNNELS--GQLSPELGSLNQL 483 (973)
Q Consensus 407 l~~L~~L~Ls~N~l~~~~~~-~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~N~l~--~~~~~~l~~l~~L 483 (973)
+++|++|+|++|++++.+|. .+.++ ++|++|++++|++++..+..+..+++|+.|++++|.++ +..|..|..+++|
T Consensus 404 l~~L~~L~L~~N~l~~~~~~~~~~~l-~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L 482 (680)
T 1ziw_A 404 LGHLEVLDLGLNEIGQELTGQEWRGL-ENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNL 482 (680)
T ss_dssp CTTCCEEECCSSCCEEECCSGGGTTC-TTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTC
T ss_pred CCCCCEEeCCCCcCccccCcccccCc-ccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCC
Confidence 99999999999999876764 45444 48999999999999999999999999999999999997 5678899999999
Q ss_pred ccccccccccccccCccccccccccEEeecCccCCCCCC--------cccccccccCeecccccccCCCcchhhcccccc
Q 002069 484 EYLDLSANTFHNSIPESLGNLVKLHYLNLSNNQFSQKIP--------NPIEKLIHLSELDLSYKIFGEEIPSQVCSMQSL 555 (973)
Q Consensus 484 ~~L~Ls~N~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~--------~~~~~l~~L~~L~ls~n~i~~~~~~~~~~l~~L 555 (973)
++|++++|.+++..+..|.++++|++|+|++|++++..+ ..+..+++|++|++++|.++...+..|..+++|
T Consensus 483 ~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L 562 (680)
T 1ziw_A 483 TILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFEL 562 (680)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred CEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCc
Confidence 999999999998888889999999999999999986422 347899999999999999997777789999999
Q ss_pred cccccccccccCccchhhhccccccEEeCcCCCCCCCCCCCc--cCCCCCcchhcCCCCccC
Q 002069 556 EKLNLSHNNLSGSISRCFEEMHWLSCIDISYNALQGLIPNST--AFRDAPMLALQGNKRLCG 615 (973)
Q Consensus 556 ~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~--~~~~~~~~~~~~N~~~c~ 615 (973)
++|+|++|++++..+..|..++.|+.|++++|++++.++... .+..+..+.+.+|||.|+
T Consensus 563 ~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~ 624 (680)
T 1ziw_A 563 KIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCT 624 (680)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBC
T ss_pred ceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccC
Confidence 999999999999999999999999999999999999987632 577899999999999997
No 5
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=4.5e-59 Score=561.54 Aligned_cols=539 Identities=19% Similarity=0.162 Sum_probs=361.8
Q ss_pred EEeCCCCCCCCCCCcccCCCCCCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCc
Q 002069 4 VLGLSFNQFSGSIPPEIGHLTHLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNL 83 (973)
Q Consensus 4 ~L~l~~~~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~ 83 (973)
.+|.++.+++ .+|..+.. ++++|+|++|.+++..|..|+++++|++|+|++|++.+..|.+|+++++|++|+|++|+
T Consensus 16 ~~~c~~~~l~-~iP~~l~~--~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~ 92 (606)
T 3t6q_A 16 TYNCENLGLN-EIPGTLPN--STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANP 92 (606)
T ss_dssp EEECTTSCCS-SCCTTSCT--TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred eEECCCCCcc-cCcCCCCC--cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCc
Confidence 3455555554 55554432 45555555555555445555555555555555555554445555555555555555555
Q ss_pred CcccCCccccCccccceeeccCCcCCCCCCCccccCCccceeecccccccccCcccccccCCCCceecccCCCCCCCCcc
Q 002069 84 LSGSIPNEVGSLKSLSDLRLSNNSLNGSIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSGAIPFS 163 (973)
Q Consensus 84 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~ 163 (973)
+++..|..|+.+++|++|++++|++++..|..++++++|++|++++|+++ +..+..
T Consensus 93 l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~------------------------~~~~~~ 148 (606)
T 3t6q_A 93 LIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHIS------------------------SIKLPK 148 (606)
T ss_dssp CSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCC------------------------CCCCCT
T ss_pred ccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCccc------------------------ccCccc
Confidence 55444555555555555555555555333444455555555555555544 322222
Q ss_pred ccCccccceeeecccccCCCCCccccccCccc--eeeccccccccccccccCCCCcccEEecCCcccCCCCCcccccccc
Q 002069 164 LGNLTNLVTLYIGINALSGSIPNEIGNLKSLS--DLRLDYNTLSGSILYSFGNLTKLEILYLDVNALSGLIPNEIGNLKS 241 (973)
Q Consensus 164 l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~--~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~ 241 (973)
+..+++|++|++++|.+++..|..++.+++|+ .|++++|++.++.+..|.. .+|+.|++++|. ..+..+.++.+
T Consensus 149 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~-~~L~~L~l~~~~---~~~~~~~~l~~ 224 (606)
T 3t6q_A 149 GFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDS-AVFQSLNFGGTQ---NLLVIFKGLKN 224 (606)
T ss_dssp TCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCEECTTTTTT-CEEEEEECTTCS---CHHHHHHHTTT
T ss_pred ccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCccChhHhhh-ccccccccCCch---hHHHHhhhccc
Confidence 22344455555555544444444455555555 4555555555544444433 355555555554 12333444433
Q ss_pred ccceecccccccCCCCcccCCcchhhhccCCCcccCchhhhhhcccc--ccceEEcccccccCCcCchhhcCCccceeec
Q 002069 242 LLALQLNYNTLSGSIPCSFGNLTKLVISCLGTNALSSSILEEIGNLK--SLLHLQLNYNTLSGSIPLSLGSLTNLATLYF 319 (973)
Q Consensus 242 L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~--~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 319 (973)
+....+..+.+.... .. .+....|..+. +|+.|++++|.+++..+..|+.+++|++|++
T Consensus 225 ~~l~~l~~~~~~~~~----------------~~---~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 285 (606)
T 3t6q_A 225 STIQSLWLGTFEDMD----------------DE---DISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDL 285 (606)
T ss_dssp CEEEEEECCCCTTSC----------------CC---CCCGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEEC
T ss_pred cchhheechhhcccc----------------cc---ccChhHhchhhcCceeEEEeecCccCccCHHHhccccCCCEEec
Confidence 333332222221100 01 11122333332 6788888888888777777888888888888
Q ss_pred cccccCCCCCccccCCCCCCcEEcCCCCCCCcchhccCCCCCCcEEEccCCcccCCCC-cccccccccchhccccccccc
Q 002069 320 STNALSGSIPNEITNLRSLSDLQLSENTLNGSIPLALGNLTKLVSLDLSINKLSGSIP-LSFASLTSLTTLYLYENSLCD 398 (973)
Q Consensus 320 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~-~~~~~l~~L~~L~L~~N~l~~ 398 (973)
++|.++ .+|..+.++++|++|++++|.+++..|..+.++++|++|++++|.+.+..+ ..+..+++|++|++++|.+++
T Consensus 286 ~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~ 364 (606)
T 3t6q_A 286 TATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIET 364 (606)
T ss_dssp TTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCE
T ss_pred cCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCcccc
Confidence 888887 667778888888888888888887777788888888888888888875444 457888888888888888876
Q ss_pred CC--CcccCCCCCCCEEEccCCCCCCCcchhhhhhcccceEEEeeCcccccccCC-CCCCCcccceeeccCCccCCCCCc
Q 002069 399 SI--PKEIGDMKSLSILDLSSNKLNGSIPLSLANLTNSLKVLYLSSNHIVGEIPL-GHGKFSSLIQLILNNNELSGQLSP 475 (973)
Q Consensus 399 ~~--~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~-~~~~~~~L~~L~l~~N~l~~~~~~ 475 (973)
.. +..+..+++|++|++++|++++..|..+..+. +|++|++++|++++..+. .+..+++|++|++++|.+++..+.
T Consensus 365 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 443 (606)
T 3t6q_A 365 SDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECP-QLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQ 443 (606)
T ss_dssp EEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCT-TCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTT
T ss_pred ccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCc-cCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHH
Confidence 55 67788888888888888888766666666655 788888888888876554 377888899999999988888888
Q ss_pred ccccccccccccccccccccc---cCccccccccccEEeecCccCCCCCCcccccccccCeecccccccCCCcchhhccc
Q 002069 476 ELGSLNQLEYLDLSANTFHNS---IPESLGNLVKLHYLNLSNNQFSQKIPNPIEKLIHLSELDLSYKIFGEEIPSQVCSM 552 (973)
Q Consensus 476 ~l~~l~~L~~L~Ls~N~i~~~---~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~i~~~~~~~~~~l 552 (973)
.+..+++|++|++++|.+++. .+..+..+++|++|++++|++++..|..|..+++|++|++++|.+++..|..+..+
T Consensus 444 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l 523 (606)
T 3t6q_A 444 LFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHL 523 (606)
T ss_dssp TTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTC
T ss_pred HHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCcc
Confidence 888888999999999988762 33568888899999999999988888888889999999999999988888889889
Q ss_pred ccccccccccccccCccchhhhccccccEEeCcCCCCCCCCCC
Q 002069 553 QSLEKLNLSHNNLSGSISRCFEEMHWLSCIDISYNALQGLIPN 595 (973)
Q Consensus 553 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~ 595 (973)
+.| +|++++|++++..+..+..++.|+.|++++|+|++.++.
T Consensus 524 ~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 565 (606)
T 3t6q_A 524 KGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCSN 565 (606)
T ss_dssp CSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGGG
T ss_pred ccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCCc
Confidence 999 999999999988888888899999999999998887763
No 6
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=6.1e-59 Score=560.36 Aligned_cols=520 Identities=22% Similarity=0.210 Sum_probs=392.2
Q ss_pred CcEEeCCCCCCCCCCCcccCCCCCCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccC
Q 002069 2 LKVLGLSFNQFSGSIPPEIGHLTHLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGN 81 (973)
Q Consensus 2 l~~L~l~~~~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~ 81 (973)
+++|||++|++++..|..|+++++|++|+|++|++++..|..|+++++|++|+|++|++++..|.+|+++++|++|++++
T Consensus 35 l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 114 (606)
T 3t6q_A 35 TECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQ 114 (606)
T ss_dssp CCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTT
T ss_pred CcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeeccc
Confidence 78999999999977788999999999999999999998899999999999999999999988899999999999999999
Q ss_pred CcCcccCCccccCccccceeeccCCcCCCCCCCccccCCccceeecccccccccCcccccccCCCC--ceecccCCCCCC
Q 002069 82 NLLSGSIPNEVGSLKSLSDLRLSNNSLNGSIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLS--DLQVSYNTLSGA 159 (973)
Q Consensus 82 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~--~L~l~~N~l~~~ 159 (973)
|++++..|..++.+++|++|++++|++++..+..+..+++|++|++++|++++..|+.|+.+++|+ .|++++|.+++.
T Consensus 115 n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~ 194 (606)
T 3t6q_A 115 TGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGI 194 (606)
T ss_dssp SCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCEE
T ss_pred cCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCcc
Confidence 999976688899999999999999999964444555699999999999999987788899999999 889999999977
Q ss_pred CCccccCccccceeeecccccCCCCCccccccCccceeeccccccccccccccCCCCcccEEecCCcccCCCCCcccccc
Q 002069 160 IPFSLGNLTNLVTLYIGINALSGSIPNEIGNLKSLSDLRLDYNTLSGSILYSFGNLTKLEILYLDVNALSGLIPNEIGNL 239 (973)
Q Consensus 160 ~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l 239 (973)
.|..+.. .+|+.|++++|. .++..+.++..++...+..+.+. .+.. ..+.+..|.++
T Consensus 195 ~~~~~~~-~~L~~L~l~~~~---~~~~~~~~l~~~~l~~l~~~~~~-----------~~~~--------~~i~~~~~~~l 251 (606)
T 3t6q_A 195 EPGAFDS-AVFQSLNFGGTQ---NLLVIFKGLKNSTIQSLWLGTFE-----------DMDD--------EDISPAVFEGL 251 (606)
T ss_dssp CTTTTTT-CEEEEEECTTCS---CHHHHHHHTTTCEEEEEECCCCT-----------TSCC--------CCCCGGGGGGG
T ss_pred ChhHhhh-ccccccccCCch---hHHHHhhhccccchhheechhhc-----------cccc--------cccChhHhchh
Confidence 6666544 678888888876 34455555555444433322222 1111 12223444444
Q ss_pred c--cccceecccccccCCCCcccCCcchhhhccCCCcccCchhhhhhccccccceEEcccccccCCcCchhhcCCcccee
Q 002069 240 K--SLLALQLNYNTLSGSIPCSFGNLTKLVISCLGTNALSSSILEEIGNLKSLLHLQLNYNTLSGSIPLSLGSLTNLATL 317 (973)
Q Consensus 240 ~--~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 317 (973)
. +|+.|++++|.+++..+..|+ .+++|++|++++|+++ .+|..+..+++|++|
T Consensus 252 ~~~~L~~L~l~~n~l~~~~~~~~~------------------------~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L 306 (606)
T 3t6q_A 252 CEMSVESINLQKHYFFNISSNTFH------------------------CFSGLQELDLTATHLS-ELPSGLVGLSTLKKL 306 (606)
T ss_dssp GGSEEEEEECTTCCCSSCCTTTTT------------------------TCTTCSEEECTTSCCS-CCCSSCCSCTTCCEE
T ss_pred hcCceeEEEeecCccCccCHHHhc------------------------cccCCCEEeccCCccC-CCChhhcccccCCEE
Confidence 3 677888888877766555554 4455566666666665 455556666666666
Q ss_pred eccccccCCCCCccccCCCCCCcEEcCCCCCCCcch-hccCCCCCCcEEEccCCcccCCC--Ccccccccccchhccccc
Q 002069 318 YFSTNALSGSIPNEITNLRSLSDLQLSENTLNGSIP-LALGNLTKLVSLDLSINKLSGSI--PLSFASLTSLTTLYLYEN 394 (973)
Q Consensus 318 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~i~~~~--~~~~~~l~~L~~L~L~~N 394 (973)
++++|.+++..|..+..+++|++|++++|.+.+..+ ..+..+++|++|++++|++++.. +..+..+++|++|++++|
T Consensus 307 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n 386 (606)
T 3t6q_A 307 VLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYN 386 (606)
T ss_dssp ECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSC
T ss_pred ECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCC
Confidence 666666665556666666666666666666654333 34666666666666666666544 556666667777777777
Q ss_pred ccccCCCcccCCCCCCCEEEccCCCCCCCcchhhhhhcccceEEEeeCcccccccCCCCCCCcccceeeccCCccCC---
Q 002069 395 SLCDSIPKEIGDMKSLSILDLSSNKLNGSIPLSLANLTNSLKVLYLSSNHIVGEIPLGHGKFSSLIQLILNNNELSG--- 471 (973)
Q Consensus 395 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~N~l~~--- 471 (973)
++++..|..|..+++|++|++++|++++..+.......++|++|++++|.+++..+..++.+++|++|++++|++++
T Consensus 387 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 466 (606)
T 3t6q_A 387 EPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNI 466 (606)
T ss_dssp SCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEE
T ss_pred cCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCcccc
Confidence 66666666677777777777777776655444422223367777777777776667777777777777777777765
Q ss_pred CCCcccccccccccccccccccccccCccccccccccEEeecCccCCCCCCcccccccccCeecccccccCCCcchhhcc
Q 002069 472 QLSPELGSLNQLEYLDLSANTFHNSIPESLGNLVKLHYLNLSNNQFSQKIPNPIEKLIHLSELDLSYKIFGEEIPSQVCS 551 (973)
Q Consensus 472 ~~~~~l~~l~~L~~L~Ls~N~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~i~~~~~~~~~~ 551 (973)
..+..+..+++|++|++++|.+++..|..|..+++|++|+|++|++++.+|..+..++.| .|++++|.+++..|..+..
T Consensus 467 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~ 545 (606)
T 3t6q_A 467 QKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPI 545 (606)
T ss_dssp CSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHH
T ss_pred ccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhccc
Confidence 233567888889999999998888888888888899999999999988888888888888 8999999998888888889
Q ss_pred cccccccccccccccCccc
Q 002069 552 MQSLEKLNLSHNNLSGSIS 570 (973)
Q Consensus 552 l~~L~~L~L~~N~l~~~~~ 570 (973)
+++|++|++++|+++...+
T Consensus 546 l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 546 LSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp HHTSSEEECTTCCEECSGG
T ss_pred CCCCCEEeCCCCCccccCC
Confidence 9999999999999986544
No 7
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=2.8e-57 Score=563.64 Aligned_cols=534 Identities=23% Similarity=0.228 Sum_probs=356.3
Q ss_pred EEeCCCCCCCCCCCcccCCCCCCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCC-CCcccCCCCCcEEEccCC
Q 002069 4 VLGLSFNQFSGSIPPEIGHLTHLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSI-PPSLGNLTSLIYIDIGNN 82 (973)
Q Consensus 4 ~L~l~~~~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~-p~~~~~l~~L~~L~l~~n 82 (973)
..|.++++++ .+|. ..++|++|||++|.+++..|..|..+++|++|+|++|...+.+ |.+|+++++|++|+|++|
T Consensus 8 ~~dcs~~~L~-~vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N 83 (844)
T 3j0a_A 8 IAFYRFCNLT-QVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSS 83 (844)
T ss_dssp EEEESCCCSS-CCCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTC
T ss_pred EEEccCCCCC-CCCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCC
Confidence 5688899998 7887 5688999999999999888899999999999999999665565 788999999999999999
Q ss_pred cCcccCCccccCccccceeeccCCcCCCCCCCc--cccCCccceeecccccccccCc-ccccccCCCCceecccCCCCCC
Q 002069 83 LLSGSIPNEVGSLKSLSDLRLSNNSLNGSIPSS--LGNLTNLVTLYLHMNALSGSIP-DEIGNLKFLSDLQVSYNTLSGA 159 (973)
Q Consensus 83 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~--~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~ 159 (973)
.+++..|..|+++++|++|+|++|++++..|.. |+++++|++|+|++|.+++..+ ..|+++++|++|++++|.+++.
T Consensus 84 ~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~ 163 (844)
T 3j0a_A 84 KIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLV 163 (844)
T ss_dssp CCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCC
T ss_pred cCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCee
Confidence 999888999999999999999999998766665 8899999999999999886544 5788999999999999998888
Q ss_pred CCccccCc--cccceeeecccccCCCCCccccccCc------cceeeccccccccccccccCCC---CcccEEecCCccc
Q 002069 160 IPFSLGNL--TNLVTLYIGINALSGSIPNEIGNLKS------LSDLRLDYNTLSGSILYSFGNL---TKLEILYLDVNAL 228 (973)
Q Consensus 160 ~p~~l~~l--~~L~~L~l~~n~l~~~~p~~~~~l~~------L~~L~L~~N~l~~~~~~~~~~l---~~L~~L~L~~n~i 228 (973)
.|..+..+ ++|+.|+++.|.+.+..|..+..+++ |++|++++|.+++..+..+... .+++.|.++.+.+
T Consensus 164 ~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~ 243 (844)
T 3j0a_A 164 CEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIM 243 (844)
T ss_dssp CSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCC
T ss_pred CHHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccc
Confidence 88888877 78888888888888777776666554 6666666666655444444322 3444444443222
Q ss_pred CCCCCccccccccccceecccccccCCCCcccCCcchhhhccCCCcccCchhhhhhccc--cccceEEcccccccCCcCc
Q 002069 229 SGLIPNEIGNLKSLLALQLNYNTLSGSIPCSFGNLTKLVISCLGTNALSSSILEEIGNL--KSLLHLQLNYNTLSGSIPL 306 (973)
Q Consensus 229 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l--~~L~~L~l~~n~l~~~~~~ 306 (973)
.. ....+.+. ......|.++ ++|+.|++++|.+.+..+.
T Consensus 244 ~~---------------~~~~~~l~------------------------~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~ 284 (844)
T 3j0a_A 244 GA---------------GFGFHNIK------------------------DPDQNTFAGLARSSVRHLDLSHGFVFSLNSR 284 (844)
T ss_dssp BC---------------SSSCSSST------------------------TGGGTTTTTTTTSCCCEEECTTCCCCEECSC
T ss_pred cc---------------cccccccC------------------------CCChhhhhccccCCccEEECCCCcccccChh
Confidence 11 01112222 2222233332 4556666666666555555
Q ss_pred hhhcCCccceeeccccccCCCCCccccCCCCCCcEEcCCCCCCCcchhccCCCCCCcEEEccCCcccCCCCccccccccc
Q 002069 307 SLGSLTNLATLYFSTNALSGSIPNEITNLRSLSDLQLSENTLNGSIPLALGNLTKLVSLDLSINKLSGSIPLSFASLTSL 386 (973)
Q Consensus 307 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L 386 (973)
.|..+++|+.|++++|.+++..|..|.++++|++|+|++|.+++..+..|.++++|++|++++|+++...+..|.++++|
T Consensus 285 ~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L 364 (844)
T 3j0a_A 285 VFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKL 364 (844)
T ss_dssp CSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCC
T ss_pred hhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCC
Confidence 56666666666666666655555556666666666666666655555566666666666666666665555556666666
Q ss_pred chhcccccccccCCCcccCCCCCCCEEEccCCCCCCCcchhhhhhcccceEEEeeCcccccccC-CCCCCCcccceeecc
Q 002069 387 TTLYLYENSLCDSIPKEIGDMKSLSILDLSSNKLNGSIPLSLANLTNSLKVLYLSSNHIVGEIP-LGHGKFSSLIQLILN 465 (973)
Q Consensus 387 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~-~~~~~~~~L~~L~l~ 465 (973)
++|+|++|.+++. ..+++|+.|++++|+++ .+|.. ..+++.|++++|++++... ..+..+++|+.|+++
T Consensus 365 ~~L~Ls~N~l~~i-----~~~~~L~~L~l~~N~l~-~l~~~----~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls 434 (844)
T 3j0a_A 365 QTLDLRDNALTTI-----HFIPSIPDIFLSGNKLV-TLPKI----NLTANLIHLSENRLENLDILYFLLRVPHLQILILN 434 (844)
T ss_dssp CEEEEETCCSCCC-----SSCCSCSEEEEESCCCC-CCCCC----CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEE
T ss_pred CEEECCCCCCCcc-----cCCCCcchhccCCCCcc-ccccc----ccccceeecccCccccCchhhhhhcCCccceeeCC
Confidence 6666666665432 22555666666666665 33332 1245666666666654321 112355666666666
Q ss_pred CCccCCCCCc-ccccccccccccccccccc-----cccCccccccccccEEeecCccCCCCCCcccccccccCeeccccc
Q 002069 466 NNELSGQLSP-ELGSLNQLEYLDLSANTFH-----NSIPESLGNLVKLHYLNLSNNQFSQKIPNPIEKLIHLSELDLSYK 539 (973)
Q Consensus 466 ~N~l~~~~~~-~l~~l~~L~~L~Ls~N~i~-----~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n 539 (973)
+|++++..+. .+..+++|+.|+|++|.++ +..+..|.++++|+.|+|++|++++.++..|..+++|++|+|++|
T Consensus 435 ~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 514 (844)
T 3j0a_A 435 QNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSN 514 (844)
T ss_dssp SCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESC
T ss_pred CCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCC
Confidence 6666543322 3344566666666666665 233345666666667777777666666666666666777777777
Q ss_pred ccCCCcchhhcccccccccccccccccCccchhhhccccccEEeCcCCCCCCCCCC
Q 002069 540 IFGEEIPSQVCSMQSLEKLNLSHNNLSGSISRCFEEMHWLSCIDISYNALQGLIPN 595 (973)
Q Consensus 540 ~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~ 595 (973)
.|++..+..+. ++|+.|+|++|+|++..+..| ..|+.+++++|++.+.++.
T Consensus 515 ~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~---~~L~~l~l~~Np~~C~c~~ 565 (844)
T 3j0a_A 515 RLTVLSHNDLP--ANLEILDISRNQLLAPNPDVF---VSLSVLDITHNKFICECEL 565 (844)
T ss_dssp CCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCC---SSCCEEEEEEECCCCSSSC
T ss_pred CCCccChhhhh--ccccEEECCCCcCCCCChhHh---CCcCEEEecCCCccccccc
Confidence 66665555554 677777777777777776554 3667778888888777664
No 8
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=4.1e-58 Score=553.14 Aligned_cols=541 Identities=21% Similarity=0.221 Sum_probs=343.4
Q ss_pred EEeCCCCCCCCCCCcccCCCCCCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCc
Q 002069 4 VLGLSFNQFSGSIPPEIGHLTHLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNL 83 (973)
Q Consensus 4 ~L~l~~~~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~ 83 (973)
+++.++++++ .+|+.+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..|.+|+++++|++|+|++|+
T Consensus 15 ~~~c~~~~l~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~ 91 (606)
T 3vq2_A 15 TYQCMDQKLS-KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNP 91 (606)
T ss_dssp EEECTTSCCS-SCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred ceEccCCCcc-cCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCc
Confidence 4555555555 5555443 555666666666555555555555555555555555554445555555555555555555
Q ss_pred CcccCCccccCccccceeeccCCcCCCCCCCccccCCccceeecccccccc-cCcccccccCCCCceecccCCCCCCCCc
Q 002069 84 LSGSIPNEVGSLKSLSDLRLSNNSLNGSIPSSLGNLTNLVTLYLHMNALSG-SIPDEIGNLKFLSDLQVSYNTLSGAIPF 162 (973)
Q Consensus 84 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 162 (973)
+++..|..|+++++|++|+|++|++++..|..++++++|++|++++|++++ .+|..|+++++|++|++++|++++..|.
T Consensus 92 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~ 171 (606)
T 3vq2_A 92 IQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVN 171 (606)
T ss_dssp CCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTT
T ss_pred ccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChh
Confidence 554445555555555555555555554444555555555555555555543 3455555555555555555555544444
Q ss_pred cccCccccceeeecccccCCCCCccccccCccceeeccccccccccccccCCCCcccEEecCCcccC-CCCCcccccccc
Q 002069 163 SLGNLTNLVTLYIGINALSGSIPNEIGNLKSLSDLRLDYNTLSGSILYSFGNLTKLEILYLDVNALS-GLIPNEIGNLKS 241 (973)
Q Consensus 163 ~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~-~~~~~~~~~l~~ 241 (973)
.|+.+++|+. .+.+|++++|.++++++..|... +|+.|++++|.++ +..|..+.++++
T Consensus 172 ~~~~l~~L~~--------------------~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~ 230 (606)
T 3vq2_A 172 DLQFLRENPQ--------------------VNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAG 230 (606)
T ss_dssp TTHHHHHCTT--------------------CCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTT
T ss_pred hhhhhhcccc--------------------ccceeeccCCCcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccc
Confidence 4444444431 01134555555544444444333 4555555555443 223444555555
Q ss_pred ccceecccccccCCCCcccCCcchhhhccCCCcccCchhhhhhccccccceEEc-ccccccCCcCchhhcCCccceeecc
Q 002069 242 LLALQLNYNTLSGSIPCSFGNLTKLVISCLGTNALSSSILEEIGNLKSLLHLQL-NYNTLSGSIPLSLGSLTNLATLYFS 320 (973)
Q Consensus 242 L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~L~l-~~n~l~~~~~~~~~~l~~L~~L~L~ 320 (973)
|+.+++..+.+..... +. . +.......+..+ +++.+++ ..|.+.+..|. +..+++|+.|+++
T Consensus 231 L~~l~l~~~~~~~~~~--l~---~----------~~~~~~~~l~~l-~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~ 293 (606)
T 3vq2_A 231 LHVHRLILGEFKDERN--LE---I----------FEPSIMEGLCDV-TIDEFRLTYTNDFSDDIVK-FHCLANVSAMSLA 293 (606)
T ss_dssp CEEEEEEEECCTTSCC--CS---C----------CCGGGGTTGGGS-EEEEEEECCCTTCCGGGGS-CGGGTTCSEEEEE
T ss_pred cccccccccccccCCc--cc---c----------cChHHhhhhhhc-cHhheeccccccccccccc-cccCCCCCEEEec
Confidence 5555554443321100 00 0 000011111122 3455555 55566655555 6677777777777
Q ss_pred ccccCCCCCccccCCCCCCcEEcCCCCCCCcchhccCCCCCCcEEEccCCcccCCCCcccccccccchhcccccccccC-
Q 002069 321 TNALSGSIPNEITNLRSLSDLQLSENTLNGSIPLALGNLTKLVSLDLSINKLSGSIPLSFASLTSLTTLYLYENSLCDS- 399 (973)
Q Consensus 321 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~- 399 (973)
+|.+. .+| .+..+++|++|++++|.++ .+| .+ .+++|++|++++|+..+. ..+..+++|++|++++|++++.
T Consensus 294 ~~~~~-~l~-~l~~~~~L~~L~l~~n~l~-~lp-~~-~l~~L~~L~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~ 366 (606)
T 3vq2_A 294 GVSIK-YLE-DVPKHFKWQSLSIIRCQLK-QFP-TL-DLPFLKSLTLTMNKGSIS--FKKVALPSLSYLDLSRNALSFSG 366 (606)
T ss_dssp SCCCC-CCC-CCCTTCCCSEEEEESCCCS-SCC-CC-CCSSCCEEEEESCSSCEE--CCCCCCTTCCEEECCSSCEEEEE
T ss_pred Cccch-hhh-hccccccCCEEEcccccCc-ccc-cC-CCCccceeeccCCcCccc--hhhccCCCCCEEECcCCccCCCc
Confidence 77775 344 6667777777777777773 455 34 677777777777754432 2556677777777777777654
Q ss_pred -CCcccCCCCCCCEEEccCCCCCCCcchhhhhhcccceEEEeeCcccccccC-CCCCCCcccceeeccCCccCCCCCccc
Q 002069 400 -IPKEIGDMKSLSILDLSSNKLNGSIPLSLANLTNSLKVLYLSSNHIVGEIP-LGHGKFSSLIQLILNNNELSGQLSPEL 477 (973)
Q Consensus 400 -~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~-~~~~~~~~L~~L~l~~N~l~~~~~~~l 477 (973)
.+..+..+++|++|++++|.++ .+|..+..+. +|++|++++|++++..+ ..+..+++|++|++++|.+++..+..+
T Consensus 367 ~~~~~~~~~~~L~~L~L~~n~l~-~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 444 (606)
T 3vq2_A 367 CCSYSDLGTNSLRHLDLSFNGAI-IMSANFMGLE-ELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIF 444 (606)
T ss_dssp ECCHHHHCCSCCCEEECCSCSEE-EECCCCTTCT-TCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTT
T ss_pred chhhhhccCCcccEeECCCCccc-cchhhccCCC-CCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhh
Confidence 2666777777777777777776 4555555544 67778887777777666 567778888888888888887778888
Q ss_pred cccccccccccccccccc-ccCccccccccccEEeecCccCCCCCCcccccccccCeecccccccCCCcchhhccccccc
Q 002069 478 GSLNQLEYLDLSANTFHN-SIPESLGNLVKLHYLNLSNNQFSQKIPNPIEKLIHLSELDLSYKIFGEEIPSQVCSMQSLE 556 (973)
Q Consensus 478 ~~l~~L~~L~Ls~N~i~~-~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~i~~~~~~~~~~l~~L~ 556 (973)
..+++|++|++++|.+++ ..|..+..+++|++|+|++|++++..|..+..+++|++|++++|.+++..|..+..+++|+
T Consensus 445 ~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 524 (606)
T 3vq2_A 445 LGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLS 524 (606)
T ss_dssp TTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCC
T ss_pred cCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCC
Confidence 888888888888888886 4688888888899999999998888888888888999999999998888888899999999
Q ss_pred ccccccccccCccchhhhccc-cccEEeCcCCCCCCCCCC
Q 002069 557 KLNLSHNNLSGSISRCFEEMH-WLSCIDISYNALQGLIPN 595 (973)
Q Consensus 557 ~L~L~~N~l~~~~~~~~~~l~-~L~~l~l~~N~l~~~~~~ 595 (973)
+|+|++|+++. .|..+..++ +|+.|++++|+|.+.++.
T Consensus 525 ~L~l~~N~l~~-~p~~~~~l~~~L~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 525 TLDCSFNRIET-SKGILQHFPKSLAFFNLTNNSVACICEH 563 (606)
T ss_dssp EEECTTSCCCC-EESCGGGSCTTCCEEECCSCCCCCSSTT
T ss_pred EEECCCCcCcc-cCHhHhhhcccCcEEEccCCCcccCCcc
Confidence 99999999984 444488886 599999999999988775
No 9
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=5.8e-57 Score=560.84 Aligned_cols=532 Identities=23% Similarity=0.267 Sum_probs=435.0
Q ss_pred CEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCcccC-CccccCccccceeeccC
Q 002069 27 KLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSI-PNEVGSLKSLSDLRLSN 105 (973)
Q Consensus 27 ~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~-p~~~~~l~~L~~L~L~~ 105 (973)
+..|.++++++ .+|. -.++|++|+|++|++++..|.+|+++++|++|+|++|...+.+ |+.|+++++|++|+|++
T Consensus 7 ~~~dcs~~~L~-~vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~ 82 (844)
T 3j0a_A 7 RIAFYRFCNLT-QVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGS 82 (844)
T ss_dssp EEEEESCCCSS-CCCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTT
T ss_pred eEEEccCCCCC-CCCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCC
Confidence 46788888888 4565 4578999999999998777888999999999999988655455 77888899999999999
Q ss_pred CcCCCCCCCccccCCccceeecccccccccCccc--ccccCCCCceecccCCCCCCCC-ccccCccccceeeecccccCC
Q 002069 106 NSLNGSIPSSLGNLTNLVTLYLHMNALSGSIPDE--IGNLKFLSDLQVSYNTLSGAIP-FSLGNLTNLVTLYIGINALSG 182 (973)
Q Consensus 106 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~--~~~l~~L~~L~l~~N~l~~~~p-~~l~~l~~L~~L~l~~n~l~~ 182 (973)
|++++..|..|+++++|++|+|++|.+++..|.. |+++++|++|+|++|.+++..+ ..|+++++|++|++++|.+++
T Consensus 83 N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~ 162 (844)
T 3j0a_A 83 SKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFL 162 (844)
T ss_dssp CCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCC
T ss_pred CcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCe
Confidence 9988777888999999999999999888656655 8888888888888888876544 568888888888888888887
Q ss_pred CCCcccccc--CccceeeccccccccccccccCCCCc------ccEEecCCcccCCCCCcccccc---ccccceeccccc
Q 002069 183 SIPNEIGNL--KSLSDLRLDYNTLSGSILYSFGNLTK------LEILYLDVNALSGLIPNEIGNL---KSLLALQLNYNT 251 (973)
Q Consensus 183 ~~p~~~~~l--~~L~~L~L~~N~l~~~~~~~~~~l~~------L~~L~L~~n~i~~~~~~~~~~l---~~L~~L~L~~N~ 251 (973)
..|..+..+ ++|+.|+++.|.+.+..+..++.+++ |+.|++++|.+++..+..+... .+++.|.++.+.
T Consensus 163 ~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~ 242 (844)
T 3j0a_A 163 VCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHI 242 (844)
T ss_dssp CCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSC
T ss_pred eCHHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceeccccc
Confidence 778888777 78888888888887766666655554 6666666666655544444332 223333332221
Q ss_pred ccCCCCcccCCcchhhhccCCCcccCchhhhhhccccccceEEcccccccCCcCchhhcC--CccceeeccccccCCCCC
Q 002069 252 LSGSIPCSFGNLTKLVISCLGTNALSSSILEEIGNLKSLLHLQLNYNTLSGSIPLSLGSL--TNLATLYFSTNALSGSIP 329 (973)
Q Consensus 252 l~~~~~~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l--~~L~~L~L~~n~l~~~~~ 329 (973)
+ . -....+.+.+.....|.++ ++|+.|++++|.+.+..|
T Consensus 243 ~------------------------~---------------~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~ 283 (844)
T 3j0a_A 243 M------------------------G---------------AGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNS 283 (844)
T ss_dssp C------------------------B---------------CSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECS
T ss_pred c------------------------c---------------ccccccccCCCChhhhhccccCCccEEECCCCcccccCh
Confidence 1 0 0123344554555566655 789999999999998889
Q ss_pred ccccCCCCCCcEEcCCCCCCCcchhccCCCCCCcEEEccCCcccCCCCcccccccccchhcccccccccCCCcccCCCCC
Q 002069 330 NEITNLRSLSDLQLSENTLNGSIPLALGNLTKLVSLDLSINKLSGSIPLSFASLTSLTTLYLYENSLCDSIPKEIGDMKS 409 (973)
Q Consensus 330 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 409 (973)
..|..+++|+.|+|++|.+++..+..|.++++|++|+|++|++++..+..|.++++|+.|++++|+++...+..|..+++
T Consensus 284 ~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~ 363 (844)
T 3j0a_A 284 RVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEK 363 (844)
T ss_dssp CCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCC
T ss_pred hhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCC
Confidence 99999999999999999999888999999999999999999999888999999999999999999999988889999999
Q ss_pred CCEEEccCCCCCCCcchhhhhhcccceEEEeeCcccccccCCCCCCCcccceeeccCCccCCCCC-cccccccccccccc
Q 002069 410 LSILDLSSNKLNGSIPLSLANLTNSLKVLYLSSNHIVGEIPLGHGKFSSLIQLILNNNELSGQLS-PELGSLNQLEYLDL 488 (973)
Q Consensus 410 L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~-~~l~~l~~L~~L~L 488 (973)
|++|+|++|.+++ ++. .++|+.|++++|+++.. |. ...+++.|++++|++++... ..+..+++|+.|+|
T Consensus 364 L~~L~Ls~N~l~~-i~~-----~~~L~~L~l~~N~l~~l-~~---~~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~L 433 (844)
T 3j0a_A 364 LQTLDLRDNALTT-IHF-----IPSIPDIFLSGNKLVTL-PK---INLTANLIHLSENRLENLDILYFLLRVPHLQILIL 433 (844)
T ss_dssp CCEEEEETCCSCC-CSS-----CCSCSEEEEESCCCCCC-CC---CCTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEE
T ss_pred CCEEECCCCCCCc-ccC-----CCCcchhccCCCCcccc-cc---cccccceeecccCccccCchhhhhhcCCccceeeC
Confidence 9999999999984 332 45899999999999844 33 25679999999999986432 34568899999999
Q ss_pred cccccccccCc-cccccccccEEeecCccCC-----CCCCcccccccccCeecccccccCCCcchhhccccccccccccc
Q 002069 489 SANTFHNSIPE-SLGNLVKLHYLNLSNNQFS-----QKIPNPIEKLIHLSELDLSYKIFGEEIPSQVCSMQSLEKLNLSH 562 (973)
Q Consensus 489 s~N~i~~~~~~-~l~~l~~L~~L~L~~N~l~-----~~~~~~~~~l~~L~~L~ls~n~i~~~~~~~~~~l~~L~~L~L~~ 562 (973)
++|++++..+. .+..+++|+.|+|++|.++ +..+..|..+++|++|+|++|.|++..+..|..+++|++|+|++
T Consensus 434 s~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 513 (844)
T 3j0a_A 434 NQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNS 513 (844)
T ss_dssp ESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEES
T ss_pred CCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCC
Confidence 99999865443 4567899999999999997 34456789999999999999999999999999999999999999
Q ss_pred ccccCccchhhhccccccEEeCcCCCCCCCCCCCccCCCCCcchhcCCCCccC
Q 002069 563 NNLSGSISRCFEEMHWLSCIDISYNALQGLIPNSTAFRDAPMLALQGNKRLCG 615 (973)
Q Consensus 563 N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~N~~~c~ 615 (973)
|+|++..+..+. +.|+.||+++|++++.+|. .+..+..+.+.+|||.|+
T Consensus 514 N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~--~~~~L~~l~l~~Np~~C~ 562 (844)
T 3j0a_A 514 NRLTVLSHNDLP--ANLEILDISRNQLLAPNPD--VFVSLSVLDITHNKFICE 562 (844)
T ss_dssp CCCSSCCCCCCC--SCCCEEEEEEECCCCCCSC--CCSSCCEEEEEEECCCCS
T ss_pred CCCCccChhhhh--ccccEEECCCCcCCCCChh--HhCCcCEEEecCCCcccc
Confidence 999998887776 8999999999999999987 466889999999999994
No 10
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.7e-56 Score=539.12 Aligned_cols=531 Identities=23% Similarity=0.233 Sum_probs=440.0
Q ss_pred CCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCcccCCccccCccccceeeccCCcCCCCCCCccccCCccceeeccc
Q 002069 50 LNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSLSDLRLSNNSLNGSIPSSLGNLTNLVTLYLHM 129 (973)
Q Consensus 50 L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 129 (973)
.++++.+++.++ .+|..+. ++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|+++++|++|+|++
T Consensus 13 ~~~~~c~~~~l~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~ 89 (606)
T 3vq2_A 13 NITYQCMDQKLS-KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTG 89 (606)
T ss_dssp TTEEECTTSCCS-SCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTT
T ss_pred CCceEccCCCcc-cCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCC
Confidence 467888888888 7887665 7888888888888877777888888888888888888876778888888888888888
Q ss_pred ccccccCcccccccCCCCceecccCCCCCCCCccccCccccceeeecccccCC-CCCccccccCccceeecccccccccc
Q 002069 130 NALSGSIPDEIGNLKFLSDLQVSYNTLSGAIPFSLGNLTNLVTLYIGINALSG-SIPNEIGNLKSLSDLRLDYNTLSGSI 208 (973)
Q Consensus 130 n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~ 208 (973)
|++++..|+.|+++++|++|++++|.+++..|..++++++|++|++++|.+++ .+|..++++++|++|++++|+++++.
T Consensus 90 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~ 169 (606)
T 3vq2_A 90 NPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTIT 169 (606)
T ss_dssp CCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEEC
T ss_pred CcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecC
Confidence 88887778888888888888888888887777788888888888888888875 46888888888888888888888777
Q ss_pred ccccCCCCccc----EEecCCcccCCCCCccccccccccceecccccccCCCCcccCCcchhhhccCCCcccCchhhhhh
Q 002069 209 LYSFGNLTKLE----ILYLDVNALSGLIPNEIGNLKSLLALQLNYNTLSGSIPCSFGNLTKLVISCLGTNALSSSILEEI 284 (973)
Q Consensus 209 ~~~~~~l~~L~----~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~n~i~~~~~~~~ 284 (973)
+..|+.+++|+ +|++++|.++++.+..+... +|+.|++++|.+++ ...+..+
T Consensus 170 ~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~-----------------------~~~~~~~ 225 (606)
T 3vq2_A 170 VNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRGNFNSS-----------------------NIMKTCL 225 (606)
T ss_dssp TTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCH-----------------------HHHHHHH
T ss_pred hhhhhhhhccccccceeeccCCCcceeCcccccCc-eeeeeeccCCccch-----------------------hHHHHHh
Confidence 77777776665 68888888877766666554 77888887777642 1234455
Q ss_pred ccccccceEEcccccccC------CcCchhhcCC--ccceeec-cccccCCCCCccccCCCCCCcEEcCCCCCCCcchhc
Q 002069 285 GNLKSLLHLQLNYNTLSG------SIPLSLGSLT--NLATLYF-STNALSGSIPNEITNLRSLSDLQLSENTLNGSIPLA 355 (973)
Q Consensus 285 ~~l~~L~~L~l~~n~l~~------~~~~~~~~l~--~L~~L~L-~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 355 (973)
.++++|+.+++..+.+.+ ..+..+..+. .++.+++ ..|.+.+..|. +..+++|+.|++++|.++. +| .
T Consensus 226 ~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~-l~-~ 302 (606)
T 3vq2_A 226 QNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIKY-LE-D 302 (606)
T ss_dssp HTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCCC-CC-C
T ss_pred ccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccc-cccCCCCCEEEecCccchh-hh-h
Confidence 666666666665444332 1122222222 4667777 67788877777 9999999999999999985 45 8
Q ss_pred cCCCCCCcEEEccCCcccCCCCcccccccccchhcccccccccCCCcccCCCCCCCEEEccCCCCCCC--cchhhhhhcc
Q 002069 356 LGNLTKLVSLDLSINKLSGSIPLSFASLTSLTTLYLYENSLCDSIPKEIGDMKSLSILDLSSNKLNGS--IPLSLANLTN 433 (973)
Q Consensus 356 ~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~--~~~~~~~~~~ 433 (973)
+..+++|++|++++|++. ..| .+ .+++|++|++++|+..+.. .+..+++|++|++++|++++. .|..+..+.
T Consensus 303 l~~~~~L~~L~l~~n~l~-~lp-~~-~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~- 376 (606)
T 3vq2_A 303 VPKHFKWQSLSIIRCQLK-QFP-TL-DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTN- 376 (606)
T ss_dssp CCTTCCCSEEEEESCCCS-SCC-CC-CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCS-
T ss_pred ccccccCCEEEcccccCc-ccc-cC-CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCC-
Confidence 999999999999999995 667 45 9999999999999655433 678999999999999999854 266776665
Q ss_pred cceEEEeeCcccccccCCCCCCCcccceeeccCCccCCCCC-cccccccccccccccccccccccCccccccccccEEee
Q 002069 434 SLKVLYLSSNHIVGEIPLGHGKFSSLIQLILNNNELSGQLS-PELGSLNQLEYLDLSANTFHNSIPESLGNLVKLHYLNL 512 (973)
Q Consensus 434 ~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~-~~l~~l~~L~~L~Ls~N~i~~~~~~~l~~l~~L~~L~L 512 (973)
+|++|++++|.+++ .+..+..+++|++|++++|++++..+ ..+..+++|++|++++|.+++..|..+.++++|++|++
T Consensus 377 ~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 455 (606)
T 3vq2_A 377 SLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKM 455 (606)
T ss_dssp CCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEEC
T ss_pred cccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEEC
Confidence 89999999999986 45888999999999999999998777 78999999999999999999989999999999999999
Q ss_pred cCccCCC-CCCcccccccccCeecccccccCCCcchhhcccccccccccccccccCccchhhhccccccEEeCcCCCCCC
Q 002069 513 SNNQFSQ-KIPNPIEKLIHLSELDLSYKIFGEEIPSQVCSMQSLEKLNLSHNNLSGSISRCFEEMHWLSCIDISYNALQG 591 (973)
Q Consensus 513 ~~N~l~~-~~~~~~~~l~~L~~L~ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~ 591 (973)
++|++++ .+|..+..+++|++|++++|.+++..|..+..+++|++|+|++|++++..+..+..++.|++||+++|++++
T Consensus 456 ~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 535 (606)
T 3vq2_A 456 AGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIET 535 (606)
T ss_dssp TTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCC
T ss_pred CCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcc
Confidence 9999988 478899999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCccCC-CCCcchhcCCCCccCCC
Q 002069 592 LIPNSTAFR-DAPMLALQGNKRLCGDI 617 (973)
Q Consensus 592 ~~~~~~~~~-~~~~~~~~~N~~~c~~~ 617 (973)
+++....+. .+..+.+.+|||.|+-.
T Consensus 536 ~p~~~~~l~~~L~~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 536 SKGILQHFPKSLAFFNLTNNSVACICE 562 (606)
T ss_dssp EESCGGGSCTTCCEEECCSCCCCCSST
T ss_pred cCHhHhhhcccCcEEEccCCCcccCCc
Confidence 887755554 48889999999999643
No 11
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.5e-52 Score=497.05 Aligned_cols=538 Identities=23% Similarity=0.218 Sum_probs=354.7
Q ss_pred CCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCcccCCccccCccccceeeccC
Q 002069 26 LKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSLSDLRLSN 105 (973)
Q Consensus 26 L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~ 105 (973)
.+.++.++.+++ .+|..+. +++++|+|++|++++..|.+|.++++|++|+|++|++++..|..|+++++|++|+|++
T Consensus 9 ~~~~~c~~~~l~-~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~ 85 (570)
T 2z63_A 9 NITYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTG 85 (570)
T ss_dssp TTEEECCSSCCS-SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTT
T ss_pred CcEEEeCCCCcc-ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcC
Confidence 456777777776 5676554 5678888888888766666788888888888888888766667777888888888888
Q ss_pred CcCCCCCCCccccCCccceeecccccccccCcccccccCCCCceecccCCCCC-CCCccccCccccceeeecccccCCCC
Q 002069 106 NSLNGSIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSG-AIPFSLGNLTNLVTLYIGINALSGSI 184 (973)
Q Consensus 106 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~p~~l~~l~~L~~L~l~~n~l~~~~ 184 (973)
|++++..|..|+++++|++|++++|++++..+..|+++++|++|++++|.+++ .+|..|+++++|++|++++|++++..
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~ 165 (570)
T 2z63_A 86 NPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIY 165 (570)
T ss_dssp CCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEEC
T ss_pred CcCCccCHhhhcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceec
Confidence 88876666778888888888888888775444467777788888888777775 35777777777777777777777666
Q ss_pred CccccccCcc----ceeeccccccccccccccCCCCcccEEecCCcccCC-CCCccccccccccceecccccccCCCCcc
Q 002069 185 PNEIGNLKSL----SDLRLDYNTLSGSILYSFGNLTKLEILYLDVNALSG-LIPNEIGNLKSLLALQLNYNTLSGSIPCS 259 (973)
Q Consensus 185 p~~~~~l~~L----~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 259 (973)
|..++.+++| +.|++++|.+.++.+..|..+ +|+.|++++|.... ..+..+.++++++.+.+..+.+..
T Consensus 166 ~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~----- 239 (570)
T 2z63_A 166 CTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRN----- 239 (570)
T ss_dssp GGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCC-----
T ss_pred HHHccchhccchhhhhcccCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccC-----
Confidence 6667777666 667777777776666666655 67777776664321 123344444444444443332211
Q ss_pred cCCcchhhhccCCCcccCchhhhhhccccccceEEcccccccCCcCchhhcCCccceeecccc-ccCCCCCccccCCCCC
Q 002069 260 FGNLTKLVISCLGTNALSSSILEEIGNLKSLLHLQLNYNTLSGSIPLSLGSLTNLATLYFSTN-ALSGSIPNEITNLRSL 338 (973)
Q Consensus 260 ~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n-~l~~~~~~~~~~l~~L 338 (973)
...+ .......+..++++ .++.+++++| .+.+..|..+..+++|
T Consensus 240 ---~~~l----------~~~~~~~~~~l~~l----------------------~l~~l~l~~~~~~~~~~~~~~~~l~~L 284 (570)
T 2z63_A 240 ---EGNL----------EKFDKSALEGLCNL----------------------TIEEFRLAYLDYYLDDIIDLFNCLTNV 284 (570)
T ss_dssp ---CSSC----------EECCTTTTGGGGGS----------------------EEEEEEEEETTEEESCSTTTTGGGTTC
T ss_pred ---chhh----------hhcchhhhcccccc----------------------chhhhhhhcchhhhhhchhhhcCcCcc
Confidence 0000 01111112222111 2334444444 3444445555555555
Q ss_pred CcEEcCCCCCCCcchhccCCCCCCcEEEccCCcccCCCCcccccccccchhcccccccccCCCcccCCCCCCCEEEccCC
Q 002069 339 SDLQLSENTLNGSIPLALGNLTKLVSLDLSINKLSGSIPLSFASLTSLTTLYLYENSLCDSIPKEIGDMKSLSILDLSSN 418 (973)
Q Consensus 339 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 418 (973)
++|++++|.++ .+|..+..+ +|++|++++|.+. ..|. ..+++|+.|++++|.+.+..+. ..+++|++|++++|
T Consensus 285 ~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n 357 (570)
T 2z63_A 285 SSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRN 357 (570)
T ss_dssp SEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSS
T ss_pred cEEEecCccch-hhhhhhccC-CccEEeeccCccc-ccCc--ccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCC
Confidence 55555555555 344445555 5566666666555 2222 2445566666666655543333 55666777777777
Q ss_pred CCCCCc--chhhhhhcccceEEEeeCcccccccCCCCCCCcccceeeccCCccCCCCC-ccccccccccccccccccccc
Q 002069 419 KLNGSI--PLSLANLTNSLKVLYLSSNHIVGEIPLGHGKFSSLIQLILNNNELSGQLS-PELGSLNQLEYLDLSANTFHN 495 (973)
Q Consensus 419 ~l~~~~--~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~-~~l~~l~~L~~L~Ls~N~i~~ 495 (973)
++++.. |..+..+. +|++|++++|.+++..+. +..+++|++|++++|.+++..+ ..+..+++|++|++++|.+++
T Consensus 358 ~l~~~~~~~~~~~~~~-~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~ 435 (570)
T 2z63_A 358 GLSFKGCCSQSDFGTT-SLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRV 435 (570)
T ss_dssp CCBEEEEEEHHHHTCS-CCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEE
T ss_pred ccCccccccccccccC-ccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccc
Confidence 666332 44454443 677777777777655444 6677778888888887776544 467778888888888888887
Q ss_pred ccCccccccccccEEeecCccCC-CCCCcccccccccCeecccccccCCCcchhhcccccccccccccccccCccchhhh
Q 002069 496 SIPESLGNLVKLHYLNLSNNQFS-QKIPNPIEKLIHLSELDLSYKIFGEEIPSQVCSMQSLEKLNLSHNNLSGSISRCFE 574 (973)
Q Consensus 496 ~~~~~l~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 574 (973)
..|..+.++++|++|++++|+++ +.+|..+..+++|++|++++|.+++..|..+..+++|++|++++|++++..+..+.
T Consensus 436 ~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 515 (570)
T 2z63_A 436 AFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFD 515 (570)
T ss_dssp CCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTT
T ss_pred cchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhh
Confidence 77778888888888888888886 46777888888888888888888888888888889999999999999988888888
Q ss_pred ccccccEEeCcCCCCCCCCCCCccC---CCCCcchhcCCCCccCCC
Q 002069 575 EMHWLSCIDISYNALQGLIPNSTAF---RDAPMLALQGNKRLCGDI 617 (973)
Q Consensus 575 ~l~~L~~l~l~~N~l~~~~~~~~~~---~~~~~~~~~~N~~~c~~~ 617 (973)
.++.|+.|++++|++++.++....+ -.-....+.+.+ .|..+
T Consensus 516 ~l~~L~~L~l~~N~~~~~~~~~~~~~~wl~~~~~~~~~~~-~C~~~ 560 (570)
T 2z63_A 516 RLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKNSQKEQGSA-KCSGS 560 (570)
T ss_dssp TCTTCCEEECCSSCBCCCTTTTHHHHHHHHHTGGGEESCC-BBTTT
T ss_pred cccCCcEEEecCCcccCCCcchHHHHHHHHhccccCCCch-hhCCC
Confidence 9999999999999999988864322 111222344555 77654
No 12
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=6e-52 Score=495.98 Aligned_cols=514 Identities=21% Similarity=0.196 Sum_probs=348.7
Q ss_pred cEEeCCCCCCCCCCCcccCCCCCCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCC
Q 002069 3 KVLGLSFNQFSGSIPPEIGHLTHLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNN 82 (973)
Q Consensus 3 ~~L~l~~~~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n 82 (973)
+..+-++.+++ .+|..+. .++++|+|++|++++..|..|..+++|++|+|++|++++..|..|+++++|++|+|++|
T Consensus 10 ~~~~c~~~~l~-~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n 86 (570)
T 2z63_A 10 ITYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGN 86 (570)
T ss_dssp TEEECCSSCCS-SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTC
T ss_pred cEEEeCCCCcc-ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCC
Confidence 45778888898 8998664 68999999999999888889999999999999999999777788999999999999999
Q ss_pred cCcccCCccccCccccceeeccCCcCCCCCCCccccCCccceeecccccccc-cCcccccccCCCCceecccCCCCCCCC
Q 002069 83 LLSGSIPNEVGSLKSLSDLRLSNNSLNGSIPSSLGNLTNLVTLYLHMNALSG-SIPDEIGNLKFLSDLQVSYNTLSGAIP 161 (973)
Q Consensus 83 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p 161 (973)
++++..|..|+.+++|++|++++|++++..+..++++++|++|++++|.+++ .+|..|+++++|++|++++|.+++..|
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~ 166 (570)
T 2z63_A 87 PIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYC 166 (570)
T ss_dssp CCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECG
T ss_pred cCCccCHhhhcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecH
Confidence 9997777899999999999999999996555579999999999999999986 469999999999999999999998888
Q ss_pred ccccCcccc----ceeeecccccCCCCCccccccCccceeecccccccc-ccccccCCCCcccEEecCCcccCCCCCccc
Q 002069 162 FSLGNLTNL----VTLYIGINALSGSIPNEIGNLKSLSDLRLDYNTLSG-SILYSFGNLTKLEILYLDVNALSGLIPNEI 236 (973)
Q Consensus 162 ~~l~~l~~L----~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~ 236 (973)
..++.+++| +.|++++|.+++..|..+..+ +|++|++++|.... ..+..+.++++++.+.+....+...
T Consensus 167 ~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~----- 240 (570)
T 2z63_A 167 TDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNE----- 240 (570)
T ss_dssp GGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCC-----
T ss_pred HHccchhccchhhhhcccCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCc-----
Confidence 899999999 899999999998778777766 89999999986542 2345567788888777665443321
Q ss_pred cccccccceecccccccCCCCcccCCcchh--hhccCCCc-ccCchhhhhhccccccceEEcccccccCCcCchhhcCCc
Q 002069 237 GNLKSLLALQLNYNTLSGSIPCSFGNLTKL--VISCLGTN-ALSSSILEEIGNLKSLLHLQLNYNTLSGSIPLSLGSLTN 313 (973)
Q Consensus 237 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L--~~l~l~~n-~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 313 (973)
.+++ ......|.++.++ +.+.+..+ .+....++.+..+++|++|++++|.++ .+|..+..+ +
T Consensus 241 ---~~l~----------~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~ 305 (570)
T 2z63_A 241 ---GNLE----------KFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-G 305 (570)
T ss_dssp ---SSCE----------ECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-C
T ss_pred ---hhhh----------hcchhhhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-C
Confidence 0111 1111122222221 11222222 222233445555666666777776666 355556665 6
Q ss_pred cceeeccccccCCCCCccccCCCCCCcEEcCCCCCCCcchhccCCCCCCcEEEccCCcccCCC--Ccccccccccchhcc
Q 002069 314 LATLYFSTNALSGSIPNEITNLRSLSDLQLSENTLNGSIPLALGNLTKLVSLDLSINKLSGSI--PLSFASLTSLTTLYL 391 (973)
Q Consensus 314 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~--~~~~~~l~~L~~L~L 391 (973)
|++|++++|.+. .+|. ..+++|+.|++++|.+.+..+. ..+++|++|++++|++++.. +..+.++++|++|++
T Consensus 306 L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l 380 (570)
T 2z63_A 306 WQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDL 380 (570)
T ss_dssp CSEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEEC
T ss_pred ccEEeeccCccc-ccCc--ccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEEC
Confidence 666666666666 3333 3556666666666666544332 45566666666666665432 444555555555555
Q ss_pred cccccccCCCcccCCCCCCCEEEccCCCCCCCcchhhhhhcccceEEEeeCcccccccCCCCCCCcccceeeccCCccCC
Q 002069 392 YENSLCDSIPKEIGDMKSLSILDLSSNKLNGSIPLSLANLTNSLKVLYLSSNHIVGEIPLGHGKFSSLIQLILNNNELSG 471 (973)
Q Consensus 392 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~N~l~~ 471 (973)
++|.+++..+. +..+++|++|++++|.+++..+. ..+..+++|++|++++|.+++
T Consensus 381 ~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~------------------------~~~~~l~~L~~L~l~~n~l~~ 435 (570)
T 2z63_A 381 SFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEF------------------------SVFLSLRNLIYLDISHTHTRV 435 (570)
T ss_dssp CSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTS------------------------CTTTTCTTCCEEECTTSCCEE
T ss_pred CCCcccccccc-ccccCCCCEEEccCCccccccch------------------------hhhhcCCCCCEEeCcCCcccc
Confidence 55555443222 55555555555555555433331 234445555555555555555
Q ss_pred CCCcccccccccccccccccccc-cccCccccccccccEEeecCccCCCCCCcccccccccCeecccccccCCCcchhhc
Q 002069 472 QLSPELGSLNQLEYLDLSANTFH-NSIPESLGNLVKLHYLNLSNNQFSQKIPNPIEKLIHLSELDLSYKIFGEEIPSQVC 550 (973)
Q Consensus 472 ~~~~~l~~l~~L~~L~Ls~N~i~-~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~i~~~~~~~~~ 550 (973)
..+..+..+++|++|++++|.++ +.+|..+..+++|++|+|++|++++..|..+..+++|++|++++|.+++..+..+.
T Consensus 436 ~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 515 (570)
T 2z63_A 436 AFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFD 515 (570)
T ss_dssp CCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTT
T ss_pred cchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhh
Confidence 55555555556666666666555 34555556666666666666666655555666666666666666666665566666
Q ss_pred ccccccccccccccccCccc
Q 002069 551 SMQSLEKLNLSHNNLSGSIS 570 (973)
Q Consensus 551 ~l~~L~~L~L~~N~l~~~~~ 570 (973)
.+++|++|++++|++++..+
T Consensus 516 ~l~~L~~L~l~~N~~~~~~~ 535 (570)
T 2z63_A 516 RLTSLQKIWLHTNPWDCSCP 535 (570)
T ss_dssp TCTTCCEEECCSSCBCCCTT
T ss_pred cccCCcEEEecCCcccCCCc
Confidence 66666666666666665543
No 13
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=6.6e-51 Score=484.38 Aligned_cols=482 Identities=21% Similarity=0.210 Sum_probs=367.6
Q ss_pred EEeCCCCCCCCCCCcccCCCCCCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCc
Q 002069 4 VLGLSFNQFSGSIPPEIGHLTHLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNL 83 (973)
Q Consensus 4 ~L~l~~~~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~ 83 (973)
+.|.++++++ .+|+.+. ++|++|+|++|++++..|..|..+++|++|+|++|++++..|++|+++++|++|+|++|+
T Consensus 9 ~c~~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~ 85 (549)
T 2z81_A 9 VCDGRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNH 85 (549)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSC
T ss_pred eEECCCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCc
Confidence 4688999998 8999775 899999999999998888999999999999999999997778899999999999999999
Q ss_pred CcccCCccccCccccceeeccCCcCCC-CCCCccccCCccceeecccccccccCc-ccccccCCCCceecccCCCCCCCC
Q 002069 84 LSGSIPNEVGSLKSLSDLRLSNNSLNG-SIPSSLGNLTNLVTLYLHMNALSGSIP-DEIGNLKFLSDLQVSYNTLSGAIP 161 (973)
Q Consensus 84 l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p 161 (973)
+++..|..|+.+++|++|+|++|++++ ..|..++++++|++|++++|++.+.+| ..|+++++|++|++++|.+++..|
T Consensus 86 l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 165 (549)
T 2z81_A 86 LSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQS 165 (549)
T ss_dssp CCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECT
T ss_pred cCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccCh
Confidence 997766779999999999999999985 357889999999999999998433454 689999999999999999998899
Q ss_pred ccccCccccceeeecccccCCCCCccc-cccCccceeecccccccccc---ccccCCCCcccEEecCCcccCCCCC----
Q 002069 162 FSLGNLTNLVTLYIGINALSGSIPNEI-GNLKSLSDLRLDYNTLSGSI---LYSFGNLTKLEILYLDVNALSGLIP---- 233 (973)
Q Consensus 162 ~~l~~l~~L~~L~l~~n~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~---~~~~~~l~~L~~L~L~~n~i~~~~~---- 233 (973)
..++.+++|++|+++.|.+. .+|..+ ..+++|++|++++|++++.. ......+++|+.|++++|.+++..+
T Consensus 166 ~~l~~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~ 244 (549)
T 2z81_A 166 QSLKSIRDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELL 244 (549)
T ss_dssp TTTTTCSEEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHH
T ss_pred hhhhccccCceEecccCccc-ccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHH
Confidence 99999999999999999987 455554 56899999999999998753 2334568899999999998875433
Q ss_pred ccccccccccceecccccccCCCCcccCCcchhhhccCCCcccCchhhhhhccccccceEEcccccccCC-----cCchh
Q 002069 234 NEIGNLKSLLALQLNYNTLSGSIPCSFGNLTKLVISCLGTNALSSSILEEIGNLKSLLHLQLNYNTLSGS-----IPLSL 308 (973)
Q Consensus 234 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~-----~~~~~ 308 (973)
..+..+++|+.+++++|.+.+..... ......+..+++|+.|++.++.+... .+..+
T Consensus 245 ~~~~~~~~L~~l~l~~~~~~~~~~~~------------------~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~ 306 (549)
T 2z81_A 245 KLLRYILELSEVEFDDCTLNGLGDFN------------------PSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVY 306 (549)
T ss_dssp GGGGGCTTCCEEEEESCEEECCSCCC------------------CCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHH
T ss_pred HHhhhhcccccccccccccccccccc------------------ccchhhhhhhcccccccccccccchhhhcccchhhh
Confidence 33466788999999999887532210 01112345667778888888776532 22234
Q ss_pred hcCCccceeeccccccCCCCCccc-cCCCCCCcEEcCCCCCCCcch---hccCCCCCCcEEEccCCcccCCCC--ccccc
Q 002069 309 GSLTNLATLYFSTNALSGSIPNEI-TNLRSLSDLQLSENTLNGSIP---LALGNLTKLVSLDLSINKLSGSIP--LSFAS 382 (973)
Q Consensus 309 ~~l~~L~~L~L~~n~l~~~~~~~~-~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~Ls~N~i~~~~~--~~~~~ 382 (973)
...++|+.|++++|.+. .+|..+ ..+++|++|++++|.+++..| ..++.+++|++|+|++|++++..+ ..+..
T Consensus 307 ~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 385 (549)
T 2z81_A 307 SLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLT 385 (549)
T ss_dssp HHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGG
T ss_pred hhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhc
Confidence 45678888889888887 455555 578889999999998887654 347788889999999998886533 45778
Q ss_pred ccccchhcccccccccCCCcccCCCCCCCEEEccCCCCCCCcchhhhhhcccceEEEeeCcccccccCCCCCCCccccee
Q 002069 383 LTSLTTLYLYENSLCDSIPKEIGDMKSLSILDLSSNKLNGSIPLSLANLTNSLKVLYLSSNHIVGEIPLGHGKFSSLIQL 462 (973)
Q Consensus 383 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L 462 (973)
+++|++|++++|+++. +|..+..+++|++|++++|+++ .+|..+ +++|++|++++|++++.+ ..+++|++|
T Consensus 386 l~~L~~L~Ls~N~l~~-lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~---~~~L~~L~Ls~N~l~~~~----~~l~~L~~L 456 (549)
T 2z81_A 386 LKNLTSLDISRNTFHP-MPDSCQWPEKMRFLNLSSTGIR-VVKTCI---PQTLEVLDVSNNNLDSFS----LFLPRLQEL 456 (549)
T ss_dssp CTTCCEEECTTCCCCC-CCSCCCCCTTCCEEECTTSCCS-CCCTTS---CTTCSEEECCSSCCSCCC----CCCTTCCEE
T ss_pred CCCCCEEECCCCCCcc-CChhhcccccccEEECCCCCcc-cccchh---cCCceEEECCCCChhhhc----ccCChhcEE
Confidence 8888888888888874 6777888888888888888887 444333 236777777777776532 345566666
Q ss_pred eccCCccCCCCCcccccccccccccccccccccccCccccccccccEEeecCccCCC
Q 002069 463 ILNNNELSGQLSPELGSLNQLEYLDLSANTFHNSIPESLGNLVKLHYLNLSNNQFSQ 519 (973)
Q Consensus 463 ~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~i~~~~~~~l~~l~~L~~L~L~~N~l~~ 519 (973)
++++|+|+ .+|. ...+++|++|+|++|++++..|..+..+++|+.|++++|++++
T Consensus 457 ~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 511 (549)
T 2z81_A 457 YISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 511 (549)
T ss_dssp ECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCC
T ss_pred ECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccC
Confidence 66666665 2332 3445555666666665555555555555555555555555543
No 14
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=1.2e-50 Score=436.86 Aligned_cols=255 Identities=21% Similarity=0.332 Sum_probs=208.9
Q ss_pred cCCcccccccCCCceeEEEEEcC------CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccce
Q 002069 701 KNFDDEHCIGNGGQGSVYKAELP------TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALH 774 (973)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 774 (973)
.++++.++||+|+||+||+|.+. +++.||||+++..... ...++|.+|+.++++++|||||+++|+|.+++.
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~--~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~ 103 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEG--PLREEFRHEAMLRARLQHPNVVCLLGVVTKDQP 103 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC---CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccCh--HHHHHHHHHHHHHHhCCCCCCCCcceEEEECCE
Confidence 45677889999999999999762 5678999999765333 336889999999999999999999999999999
Q ss_pred eEEEEEecCCCChHHHhccCc-------------cccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecC
Q 002069 775 SFVVYEYLEMGSLAMILSNDA-------------AAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNL 841 (973)
Q Consensus 775 ~~lv~e~~~~~~L~~~l~~~~-------------~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~ 841 (973)
.++|||||++|+|.+++.... ....++|.++++|+.|||.|++|||++ +||||||||+|||+++
T Consensus 104 ~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~ 180 (308)
T 4gt4_A 104 LSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYD 180 (308)
T ss_dssp CEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECG
T ss_pred EEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECC
Confidence 999999999999999996532 134689999999999999999999999 9999999999999999
Q ss_pred CCceEEecccccccccCCC--CcccccccccCcccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcchhhhhhhhhh
Q 002069 842 EYEAHVSDFGISKFLKLGL--SNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSICSSLSS 918 (973)
Q Consensus 842 ~~~~kl~Dfg~a~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~ 918 (973)
++.+||+|||+|+...... .......||+.|||||++.+..++.++|||||||++|||+| |+.||......
T Consensus 181 ~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~------ 254 (308)
T 4gt4_A 181 KLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ------ 254 (308)
T ss_dssp GGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH------
T ss_pred CCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHH------
Confidence 9999999999998765432 22345679999999999999999999999999999999998 89999754321
Q ss_pred hhhhhhhhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 919 NLNIALDEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
.....+......+.. ..++..+.+++.+||+.||++||||+||++.|+
T Consensus 255 ---~~~~~i~~~~~~~~p---~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~ 302 (308)
T 4gt4_A 255 ---DVVEMIRNRQVLPCP---DDCPAWVYALMIECWNEFPSRRPRFKDIHSRLR 302 (308)
T ss_dssp ---HHHHHHHTTCCCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ---HHHHHHHcCCCCCCc---ccchHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 111111121111111 123445789999999999999999999999986
No 15
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=6.8e-50 Score=475.62 Aligned_cols=492 Identities=20% Similarity=0.177 Sum_probs=349.2
Q ss_pred CCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCcccCCccccCccccceeeccC
Q 002069 26 LKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSLSDLRLSN 105 (973)
Q Consensus 26 L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~ 105 (973)
.-..|.++|+++ .+|..+. ++|++|+|++|++++..|.+|+++++|++|++++|++++..|..|+.+++|++|+|++
T Consensus 7 ~~~c~~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~ 83 (549)
T 2z81_A 7 SGVCDGRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSD 83 (549)
T ss_dssp TSEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTT
T ss_pred CceEECCCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCC
Confidence 344688888888 5677665 7899999999999877788899999999999999999877778899999999999999
Q ss_pred CcCCCCCCCccccCCccceeecccccccc-cCcccccccCCCCceecccCC-CCCCCCccccCccccceeeecccccCCC
Q 002069 106 NSLNGSIPSSLGNLTNLVTLYLHMNALSG-SIPDEIGNLKFLSDLQVSYNT-LSGAIPFSLGNLTNLVTLYIGINALSGS 183 (973)
Q Consensus 106 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~l~~N~-l~~~~p~~l~~l~~L~~L~l~~n~l~~~ 183 (973)
|++++..|..|+++++|++|+|++|++++ ..|..|+++++|++|++++|. ++...+..|.++++|++|++++|++++.
T Consensus 84 n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~ 163 (549)
T 2z81_A 84 NHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNY 163 (549)
T ss_dssp SCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEE
T ss_pred CccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCccccc
Confidence 99986666668899999999999999875 356788889999999999988 4434446788888888888888888887
Q ss_pred CCccccccCccceeeccccccccccccccCCCCcccEEecCCcccCCCC---CccccccccccceecccccccCCCCccc
Q 002069 184 IPNEIGNLKSLSDLRLDYNTLSGSILYSFGNLTKLEILYLDVNALSGLI---PNEIGNLKSLLALQLNYNTLSGSIPCSF 260 (973)
Q Consensus 184 ~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~---~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 260 (973)
.|..+..+++|++|+++.|.+..++...+..+++|+.|++++|++++.. ......+++|+.|++++|.+++..+..
T Consensus 164 ~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~- 242 (549)
T 2z81_A 164 QSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNE- 242 (549)
T ss_dssp CTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHH-
T ss_pred ChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHH-
Confidence 8888888888888888888887665555567888888888888887652 122344567777777777665322211
Q ss_pred CCcchhhhccCCCcccCchhhhhhccccccceEEcccccccCCcCchhhcCCccceeeccccccCCCCCccccCCCCCCc
Q 002069 261 GNLTKLVISCLGTNALSSSILEEIGNLKSLLHLQLNYNTLSGSIPLSLGSLTNLATLYFSTNALSGSIPNEITNLRSLSD 340 (973)
Q Consensus 261 ~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 340 (973)
....+..+++|+.+++++|.+.+..... ......+..+++|+.
T Consensus 243 -------------------l~~~~~~~~~L~~l~l~~~~~~~~~~~~------------------~~~~~~~~~l~~L~~ 285 (549)
T 2z81_A 243 -------------------LLKLLRYILELSEVEFDDCTLNGLGDFN------------------PSESDVVSELGKVET 285 (549)
T ss_dssp -------------------HHGGGGGCTTCCEEEEESCEEECCSCCC------------------CCTTTCCCCCTTCCE
T ss_pred -------------------HHHHhhhhcccccccccccccccccccc------------------ccchhhhhhhccccc
Confidence 1223455667777777777766421100 000112333444555
Q ss_pred EEcCCCCCCCc-----chhccCCCCCCcEEEccCCcccCCCCccc-ccccccchhcccccccccCCC---cccCCCCCCC
Q 002069 341 LQLSENTLNGS-----IPLALGNLTKLVSLDLSINKLSGSIPLSF-ASLTSLTTLYLYENSLCDSIP---KEIGDMKSLS 411 (973)
Q Consensus 341 L~L~~N~l~~~-----~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~-~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~ 411 (973)
|++.++.+... .+..+...++|++|++++|+++ ..|..+ ..+++|++|++++|++++..| ..++.+++|+
T Consensus 286 L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~ 364 (549)
T 2z81_A 286 VTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQ 364 (549)
T ss_dssp EEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCC
T ss_pred ccccccccchhhhcccchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCc
Confidence 55555444321 1111223456677777777766 344333 456777777777777665442 3356677777
Q ss_pred EEEccCCCCCCCcc--hhhhhhcccceEEEeeCcccccccCCCCCCCcccceeeccCCccCCCCCccccccccccccccc
Q 002069 412 ILDLSSNKLNGSIP--LSLANLTNSLKVLYLSSNHIVGEIPLGHGKFSSLIQLILNNNELSGQLSPELGSLNQLEYLDLS 489 (973)
Q Consensus 412 ~L~Ls~N~l~~~~~--~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls 489 (973)
+|+|++|++++..+ ..+..+ ++|++|++++|+++ .+|..+..+++|++|++++|++++. +..+ .++|++|+++
T Consensus 365 ~L~Ls~N~l~~~~~~~~~~~~l-~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~l-~~~~--~~~L~~L~Ls 439 (549)
T 2z81_A 365 TLVLSQNHLRSMQKTGEILLTL-KNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRVV-KTCI--PQTLEVLDVS 439 (549)
T ss_dssp EEECTTSCCCCHHHHHHHGGGC-TTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSCC-CTTS--CTTCSEEECC
T ss_pred EEEccCCcccccccchhhhhcC-CCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcccc-cchh--cCCceEEECC
Confidence 77777777763221 223333 36778888888777 4566677777888888888887743 3222 2578888888
Q ss_pred ccccccccCccccccccccEEeecCccCCCCCCcccccccccCeecccccccCCCcchhhcccccccccccccccccCcc
Q 002069 490 ANTFHNSIPESLGNLVKLHYLNLSNNQFSQKIPNPIEKLIHLSELDLSYKIFGEEIPSQVCSMQSLEKLNLSHNNLSGSI 569 (973)
Q Consensus 490 ~N~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 569 (973)
+|++++. ...+++|++|+|++|+|+. +|. ...+++|++|++++|.+++..+..+..+++|++|++++|++++..
T Consensus 440 ~N~l~~~----~~~l~~L~~L~Ls~N~l~~-ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 513 (549)
T 2z81_A 440 NNNLDSF----SLFLPRLQELYISRNKLKT-LPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 513 (549)
T ss_dssp SSCCSCC----CCCCTTCCEEECCSSCCSS-CCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCH
T ss_pred CCChhhh----cccCChhcEEECCCCccCc-CCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCC
Confidence 8888753 2567888999999998874 444 467888999999999998888888889999999999999998776
Q ss_pred c
Q 002069 570 S 570 (973)
Q Consensus 570 ~ 570 (973)
+
T Consensus 514 ~ 514 (549)
T 2z81_A 514 P 514 (549)
T ss_dssp H
T ss_pred c
Confidence 5
No 16
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1e-50 Score=435.29 Aligned_cols=254 Identities=25% Similarity=0.420 Sum_probs=207.4
Q ss_pred cCCcccccccCCCceeEEEEEcC------CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccce
Q 002069 701 KNFDDEHCIGNGGQGSVYKAELP------TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALH 774 (973)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 774 (973)
++|.+.+.||+|+||+||+|++. +++.||||+++.. .....++|.+|++++++++|||||+++|+|.+++.
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~ 89 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA---SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDP 89 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC---ChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCE
Confidence 56888999999999999999753 4778999999753 33446889999999999999999999999999999
Q ss_pred eEEEEEecCCCChHHHhccCc----------cccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCc
Q 002069 775 SFVVYEYLEMGSLAMILSNDA----------AAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYE 844 (973)
Q Consensus 775 ~~lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~ 844 (973)
.++|||||++|+|.++++..+ ....++|.+++.|+.|||.|++|||++ +|+||||||+|||++.++.
T Consensus 90 ~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~ 166 (299)
T 4asz_A 90 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLL 166 (299)
T ss_dssp EEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGC
T ss_pred EEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCc
Confidence 999999999999999997643 234699999999999999999999999 9999999999999999999
Q ss_pred eEEecccccccccCCCCc--ccccccccCcccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcchhhhhhhhhhhhh
Q 002069 845 AHVSDFGISKFLKLGLSN--RTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSICSSLSSNLN 921 (973)
Q Consensus 845 ~kl~Dfg~a~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~ 921 (973)
+||+|||+|+........ .....||+.|||||++.+..++.++|||||||++|||+| |+.||....... ..
T Consensus 167 ~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~------~~ 240 (299)
T 4asz_A 167 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE------VI 240 (299)
T ss_dssp EEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH------HH
T ss_pred EEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH------HH
Confidence 999999999876543222 223568999999999999999999999999999999998 999997543210 01
Q ss_pred hhhhhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 922 IALDEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
..+.....+..+. ..+..+.+++.+||+.||++||||++|++.|+
T Consensus 241 ~~i~~~~~~~~p~------~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~ 285 (299)
T 4asz_A 241 ECITQGRVLQRPR------TCPQEVYELMLGCWQREPHMRKNIKGIHTLLQ 285 (299)
T ss_dssp HHHHHTCCCCCCT------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHcCCCCCCCc------cchHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 1111111112221 22345789999999999999999999998875
No 17
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=6.5e-50 Score=428.60 Aligned_cols=257 Identities=24% Similarity=0.364 Sum_probs=202.9
Q ss_pred hcCCcccccccCCCceeEEEEEcCCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELPTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVVY 779 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 779 (973)
.+++++.++||+|+||+||+|++. ..||||+++..... ....+.|.+|+.++++++|||||+++|++.+ +..++||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~-~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVm 110 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPT-PEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVT 110 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEE
Confidence 467888999999999999999874 36999998754333 3446889999999999999999999999865 4689999
Q ss_pred EecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccCC
Q 002069 780 EYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKLG 859 (973)
Q Consensus 780 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 859 (973)
|||++|+|.++++... ..+++.++..|+.|||.||+|||++ +||||||||+|||+++++.+||+|||+|+.....
T Consensus 111 Ey~~gGsL~~~l~~~~--~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~ 185 (307)
T 3omv_A 111 QWCEGSSLYKHLHVQE--TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp ECCSSCBHHHHHHTSC--CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC----
T ss_pred EcCCCCCHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccC
Confidence 9999999999997543 4689999999999999999999999 9999999999999999999999999999876543
Q ss_pred C--CcccccccccCccccccccc---CCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCC
Q 002069 860 L--SNRTELAGTFGYIAPELAYT---MKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLPT 934 (973)
Q Consensus 860 ~--~~~~~~~g~~~y~aPE~~~~---~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 934 (973)
. .......||+.|||||++.+ .+|+.++|||||||++|||+||+.||.......... .........+..+.
T Consensus 186 ~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~----~~~~~~~~~p~~~~ 261 (307)
T 3omv_A 186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQII----FMVGRGYASPDLSK 261 (307)
T ss_dssp --------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHH----HHHHTTCCCCCSTT
T ss_pred CcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHH----HHHhcCCCCCCccc
Confidence 2 23345689999999999864 458999999999999999999999997543211100 11111122222222
Q ss_pred CchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 935 PLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 935 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
... .++..+.+++.+||+.||++||||+||++.|+
T Consensus 262 ~~~---~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le 296 (307)
T 3omv_A 262 LYK---NCPKAMKRLVADCVKKVKEERPLFPQILSSIE 296 (307)
T ss_dssp SCT---TSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHH
T ss_pred ccc---cchHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 222 23456788999999999999999999998875
No 18
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1.6e-50 Score=439.16 Aligned_cols=252 Identities=20% Similarity=0.299 Sum_probs=205.0
Q ss_pred cCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEEE
Q 002069 701 KNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVVY 779 (973)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 779 (973)
++|++.+.||+|+||+||+|+. .+|+.||||++....... ...+.+.+|+.++++++|||||++++++.+++..|+||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~-~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm 102 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSS-KEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM 102 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCH-HHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCH-HHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 6899999999999999999965 589999999997654333 34678999999999999999999999999999999999
Q ss_pred EecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccCC
Q 002069 780 EYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKLG 859 (973)
Q Consensus 780 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 859 (973)
|||+||+|.+++.... ...+++.+++.++.||+.||+|||++ +|+||||||+|||++.+|.+||+|||+|+.....
T Consensus 103 Ey~~gg~L~~~i~~~~-~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 178 (350)
T 4b9d_A 103 DYCEGGDLFKRINAQK-GVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST 178 (350)
T ss_dssp ECCTTCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHH
T ss_pred eCCCCCcHHHHHHHcC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCC
Confidence 9999999999996543 24578999999999999999999999 9999999999999999999999999999877544
Q ss_pred CCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCCchhh
Q 002069 860 LSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLPTPLRNV 939 (973)
Q Consensus 860 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 939 (973)
.......+||+.|||||++.+..|+.++||||+||++|||+||+.||...... .....+....++....
T Consensus 179 ~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~---------~~~~~i~~~~~~~~~~-- 247 (350)
T 4b9d_A 179 VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMK---------NLVLKIISGSFPPVSL-- 247 (350)
T ss_dssp HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH---------HHHHHHHHTCCCCCCT--
T ss_pred cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH---------HHHHHHHcCCCCCCCc--
Confidence 33344568999999999999999999999999999999999999999754321 1111222222221111
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 002069 940 QDKLISIMEVSISCLDESPTSRPTMQKVSQ 969 (973)
Q Consensus 940 ~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 969 (973)
..+.++.++|.+||+.||++|||++|+++
T Consensus 248 -~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 248 -HYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp -TSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -cCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 12345788999999999999999999976
No 19
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=5.6e-50 Score=435.82 Aligned_cols=254 Identities=24% Similarity=0.420 Sum_probs=202.7
Q ss_pred cCCcccccccCCCceeEEEEEcC------CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccce
Q 002069 701 KNFDDEHCIGNGGQGSVYKAELP------TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALH 774 (973)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 774 (973)
++|.+.++||+|+||+||+|++. +++.||||+++.. .....++|.+|++++++++|||||+++|+|.+++.
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~ 117 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---SESARQDFQREAELLTMLQHQHIVRFFGVCTEGRP 117 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC---SHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC---CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCE
Confidence 46778899999999999999753 4788999999753 33446889999999999999999999999999999
Q ss_pred eEEEEEecCCCChHHHhccCcc------------ccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCC
Q 002069 775 SFVVYEYLEMGSLAMILSNDAA------------AEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLE 842 (973)
Q Consensus 775 ~~lv~e~~~~~~L~~~l~~~~~------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~ 842 (973)
.++|||||++|+|.++++.... ..+++|.+++.|+.|||.|++|||+. +|+||||||+|||++.+
T Consensus 118 ~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~ 194 (329)
T 4aoj_A 118 LLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQG 194 (329)
T ss_dssp EEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETT
T ss_pred EEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCC
Confidence 9999999999999999976532 24689999999999999999999999 99999999999999999
Q ss_pred CceEEecccccccccCCCC--cccccccccCcccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcchhhhhhhhhhh
Q 002069 843 YEAHVSDFGISKFLKLGLS--NRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSICSSLSSN 919 (973)
Q Consensus 843 ~~~kl~Dfg~a~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~ 919 (973)
+.+||+|||+|+....... ......||+.|||||++.+..++.++|||||||++|||+| |+.||........
T Consensus 195 ~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~----- 269 (329)
T 4aoj_A 195 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEA----- 269 (329)
T ss_dssp TEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHH-----
T ss_pred CcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHH-----
Confidence 9999999999987654322 2334679999999999999999999999999999999999 9999975432110
Q ss_pred hhhhhhhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 920 LNIALDEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
...+....++..+. ..+..+.+++.+||+.||++||||+||++.|+
T Consensus 270 -~~~i~~g~~~~~p~------~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~ 315 (329)
T 4aoj_A 270 -IDCITQGRELERPR------ACPPEVYAIMRGCWQREPQQRHSIKDVHARLQ 315 (329)
T ss_dssp -HHHHHHTCCCCCCT------TCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHH
T ss_pred -HHHHHcCCCCCCcc------cccHHHHHHHHHHcCcChhHCcCHHHHHHHHH
Confidence 01111111222222 12345789999999999999999999999875
No 20
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=4.8e-50 Score=434.65 Aligned_cols=250 Identities=26% Similarity=0.388 Sum_probs=210.3
Q ss_pred cCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEEE
Q 002069 701 KNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVVY 779 (973)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 779 (973)
..|++.++||+|+||+||+|.. .+|+.||||++...... ..+.+.+|+.++++++|||||++++++.+++..|+||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~---~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivm 150 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ---RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 150 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCS---SGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchh---HHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 5699999999999999999965 48999999998643222 2456889999999999999999999999999999999
Q ss_pred EecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccCC
Q 002069 780 EYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKLG 859 (973)
Q Consensus 780 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 859 (973)
|||++|+|.++++. ..+++.++..++.||+.||+|||++ +|+||||||+|||++.+|.+||+|||+|+.+...
T Consensus 151 Ey~~gg~L~~~l~~----~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 223 (346)
T 4fih_A 151 EFLEGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE 223 (346)
T ss_dssp CCCTTEEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSS
T ss_pred eCCCCCcHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCC
Confidence 99999999999964 3589999999999999999999999 9999999999999999999999999999988766
Q ss_pred CCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCCchhh
Q 002069 860 LSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLPTPLRNV 939 (973)
Q Consensus 860 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 939 (973)
.......+||+.|||||++.+..|+.++||||+||++|||++|+.||........ ...+.....+.+. ..
T Consensus 224 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~------~~~i~~~~~~~~~----~~ 293 (346)
T 4fih_A 224 VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA------MKMIRDNLPPRLK----NL 293 (346)
T ss_dssp SCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH------HHHHHHSSCCCCS----CG
T ss_pred CCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH------HHHHHcCCCCCCC----cc
Confidence 5566678999999999999999999999999999999999999999975432110 0111111122221 12
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 940 QDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 940 ~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
...+.++.+++.+||+.||++|||++|+++.
T Consensus 294 ~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 294 HKVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp GGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 2234467889999999999999999999863
No 21
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=2.9e-50 Score=483.88 Aligned_cols=458 Identities=20% Similarity=0.249 Sum_probs=288.0
Q ss_pred CCCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCC------C------CCCCcccCCCCCcEEEccCCcCcccCCcc
Q 002069 24 THLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLK------G------SIPPSLGNLTSLIYIDIGNNLLSGSIPNE 91 (973)
Q Consensus 24 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~------~------~~p~~~~~l~~L~~L~l~~n~l~~~~p~~ 91 (973)
.+++.|+|++|.++|.+|++|++|++|++|+|++|.+. + .+|... +..|+ +++++|.+.+.+|..
T Consensus 81 ~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~ 157 (636)
T 4eco_A 81 GRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPRED 157 (636)
T ss_dssp CCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGG
T ss_pred CCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhh
Confidence 46777788888777777777777778888888777651 1 233333 44555 666667666666665
Q ss_pred ccC-ccccceeeccCCcCCCCCCCccccCCccceeecc--cccccccCcccccccCCCCceecccCCCCCC---------
Q 002069 92 VGS-LKSLSDLRLSNNSLNGSIPSSLGNLTNLVTLYLH--MNALSGSIPDEIGNLKFLSDLQVSYNTLSGA--------- 159 (973)
Q Consensus 92 ~~~-l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~--~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~--------- 159 (973)
+.. +..+..+++....+.. .....++.+++. .|++++ +|+.|+++++|++|+|++|++++.
T Consensus 158 ~~~~~~~l~~~~l~~~~~~~------~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~ 230 (636)
T 4eco_A 158 FSDLIKDCINSDPQQKSIKK------SSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENE 230 (636)
T ss_dssp SCHHHHHHHHHCTTSCCCCC------CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCT
T ss_pred HHHHHHHHhhcCcccccccc------ccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCcccccccccccccc
Confidence 553 2334444444333321 111222223332 467776 777777777777777777777764
Q ss_pred --------CCcccc--CccccceeeecccccCCCCCccccccCccceeeccccc-ccc-ccccccCCC------CcccEE
Q 002069 160 --------IPFSLG--NLTNLVTLYIGINALSGSIPNEIGNLKSLSDLRLDYNT-LSG-SILYSFGNL------TKLEIL 221 (973)
Q Consensus 160 --------~p~~l~--~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~~~~~~~l------~~L~~L 221 (973)
+|..++ ++++|++|++++|++.+.+|..++++++|++|++++|+ +++ ..|..++.+ ++|++|
T Consensus 231 ~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L 310 (636)
T 4eco_A 231 NSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQII 310 (636)
T ss_dssp TSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEE
T ss_pred ccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEE
Confidence 677777 77777777777777777777777777777777777776 766 555556554 777777
Q ss_pred ecCCcccCCCCCc--cccccccccceecccccccCCCCcccCCcchhhhccCCCcccCchhhhhhccccc-cceEEcccc
Q 002069 222 YLDVNALSGLIPN--EIGNLKSLLALQLNYNTLSGSIPCSFGNLTKLVISCLGTNALSSSILEEIGNLKS-LLHLQLNYN 298 (973)
Q Consensus 222 ~L~~n~i~~~~~~--~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~-L~~L~l~~n 298 (973)
++++|+++. .|. .++++++|+.|++++|++++.+| .|+.+++|+.|++++|.+. ..+..+..+++ |++|++++|
T Consensus 311 ~L~~n~l~~-ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N 387 (636)
T 4eco_A 311 YIGYNNLKT-FPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHN 387 (636)
T ss_dssp ECCSSCCSS-CCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSS
T ss_pred ECCCCcCCc-cCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCC
Confidence 777777774 455 67777777777777777775555 6666666666666665555 33344666666 777777777
Q ss_pred cccCCcCchhhcCC--ccceeeccccccCCCCCcccc-------CCCCCCcEEcCCCCCCCcchhccCCCCCCcEEEccC
Q 002069 299 TLSGSIPLSLGSLT--NLATLYFSTNALSGSIPNEIT-------NLRSLSDLQLSENTLNGSIPLALGNLTKLVSLDLSI 369 (973)
Q Consensus 299 ~l~~~~~~~~~~l~--~L~~L~L~~n~l~~~~~~~~~-------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 369 (973)
.++ .+|..+..++ +|++|++++|.+++..|..+. .+++|++|+|++|.++...+..+..+++|++|+|++
T Consensus 388 ~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~ 466 (636)
T 4eco_A 388 KLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMG 466 (636)
T ss_dssp CCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCS
T ss_pred cCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCC
Confidence 776 5555555543 677777777777766666666 566677777777777654444555666777777777
Q ss_pred CcccCCCCccccccc-------ccchhcccccccccCCCcccC--CCCCCCEEEccCCCCCCCcchhhhhhcccceEEEe
Q 002069 370 NKLSGSIPLSFASLT-------SLTTLYLYENSLCDSIPKEIG--DMKSLSILDLSSNKLNGSIPLSLANLTNSLKVLYL 440 (973)
Q Consensus 370 N~i~~~~~~~~~~l~-------~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~L 440 (973)
|+++...+..+.... +|+.|+|++|+++ .+|..+. .+++|++|+|++|++++ +|..+..+. +|++|+|
T Consensus 467 N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~-~L~~L~L 543 (636)
T 4eco_A 467 NMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSS-TLKGFGI 543 (636)
T ss_dssp SCCSBCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCS-SCCEEEC
T ss_pred CCCCCcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCC-CCCEEEC
Confidence 776633333333222 5666666666665 3444444 55566666666666653 555555433 4555555
Q ss_pred eCcccccccCCCCCCCcccceeeccCCccCCCCCcccccccccccccccccccccccCccccccccccEEeecCccCCC
Q 002069 441 SSNHIVGEIPLGHGKFSSLIQLILNNNELSGQLSPELGSLNQLEYLDLSANTFHNSIPESLGNLVKLHYLNLSNNQFSQ 519 (973)
Q Consensus 441 ~~n~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~i~~~~~~~l~~l~~L~~L~L~~N~l~~ 519 (973)
++|+ ++++|++.+..|..+..+++|++|+|++|.+ +.+|..+. ++|+.|+|++|++..
T Consensus 544 s~N~------------------~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~--~~L~~L~Ls~N~l~~ 601 (636)
T 4eco_A 544 RNQR------------------DAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT--PNISVLDIKDNPNIS 601 (636)
T ss_dssp CSCB------------------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--TTCCEEECCSCTTCE
T ss_pred CCCc------------------ccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh--CcCCEEECcCCCCcc
Confidence 5543 2355666666677777777777777777777 35555554 567777777776654
No 22
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=5.4e-49 Score=464.27 Aligned_cols=455 Identities=22% Similarity=0.204 Sum_probs=314.0
Q ss_pred cEEeCCCCCCCCCCCcccCCCCCCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCC
Q 002069 3 KVLGLSFNQFSGSIPPEIGHLTHLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNN 82 (973)
Q Consensus 3 ~~L~l~~~~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n 82 (973)
++||+++|+++ .+|+.+. ++|++|+|++|++++..|..|..+++|++|+|++|++++..|.+|+++++|++|+|++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 58999999999 8999887 99999999999999887789999999999999999999777999999999999999999
Q ss_pred cCcccCCccccCccccceeeccCCcCCC-CCCCccccCCccceeecccccccccCcccccccCCC--CceecccCCC--C
Q 002069 83 LLSGSIPNEVGSLKSLSDLRLSNNSLNG-SIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFL--SDLQVSYNTL--S 157 (973)
Q Consensus 83 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L--~~L~l~~N~l--~ 157 (973)
+++ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|++++|++++ ..+..+++| ++|++++|.+ +
T Consensus 80 ~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~ 153 (520)
T 2z7x_B 80 KLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGE 153 (520)
T ss_dssp CCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTS
T ss_pred cee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeeccccccc
Confidence 999 67777 89999999999999986 478999999999999999999985 568888888 9999999999 7
Q ss_pred CCCCccccCcc-ccceeeecccccCCCCCc-cccccCccceeeccccc-------cccccccccCCCCcccEEecCCccc
Q 002069 158 GAIPFSLGNLT-NLVTLYIGINALSGSIPN-EIGNLKSLSDLRLDYNT-------LSGSILYSFGNLTKLEILYLDVNAL 228 (973)
Q Consensus 158 ~~~p~~l~~l~-~L~~L~l~~n~l~~~~p~-~~~~l~~L~~L~L~~N~-------l~~~~~~~~~~l~~L~~L~L~~n~i 228 (973)
+..|..+..+. +...+++++|.+.+.++. .+.++++|+.|++++|. +.+..+ .|+.+++|+.|++++|.+
T Consensus 154 ~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l 232 (520)
T 2z7x_B 154 KEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIET 232 (520)
T ss_dssp SCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEE
T ss_pred ccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhcccccccc
Confidence 78888888877 445677888888765554 67889999999999997 665544 789999999999999988
Q ss_pred CCCCCcccc---ccccccceecccccccCCCCccc-----CCcchhhhccCCCcccCchhhhhhccccccceEEcccccc
Q 002069 229 SGLIPNEIG---NLKSLLALQLNYNTLSGSIPCSF-----GNLTKLVISCLGTNALSSSILEEIGNLKSLLHLQLNYNTL 300 (973)
Q Consensus 229 ~~~~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~-----~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l 300 (973)
++..+..+. ..++|++|++++|++++..|..+ +.++.|+.+++..|.+ ..+.+.+..+
T Consensus 233 ~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~-~~p~~~~~~~------------- 298 (520)
T 2z7x_B 233 TWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF-GFPQSYIYEI------------- 298 (520)
T ss_dssp EHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC-CSCTHHHHHH-------------
T ss_pred CHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce-ecchhhhhcc-------------
Confidence 753222111 23589999999999998777766 5555555555555444 2222233322
Q ss_pred cCCcCchhhcCCccceeeccccccCCCCCccccCCCCCCcEEcCCCCCCCcchhccCCCCCCcEEEccCCcccC--CCCc
Q 002069 301 SGSIPLSLGSLTNLATLYFSTNALSGSIPNEITNLRSLSDLQLSENTLNGSIPLALGNLTKLVSLDLSINKLSG--SIPL 378 (973)
Q Consensus 301 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~--~~~~ 378 (973)
...++|+.|++++|.+.... .+..+++|++|++++|.+++..|..++++++|++|+|++|++++ ..|.
T Consensus 299 --------~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~ 368 (520)
T 2z7x_B 299 --------FSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAE 368 (520)
T ss_dssp --------HHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHH
T ss_pred --------cccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchH
Confidence 00034444444444443211 11344445555555555544444444555555555555555543 2233
Q ss_pred ccccccccchhcccccccccCCC-cccCCCCCCCEEEccCCCCCCCcchhhhhhcccceEEEeeCcccccccCCCCCCCc
Q 002069 379 SFASLTSLTTLYLYENSLCDSIP-KEIGDMKSLSILDLSSNKLNGSIPLSLANLTNSLKVLYLSSNHIVGEIPLGHGKFS 457 (973)
Q Consensus 379 ~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~ 457 (973)
.|..+++|++|++++|++++.+| ..+..+++|++|++++|++++..|..+. ++|++|++++|+++ .+|..+..++
T Consensus 369 ~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~---~~L~~L~Ls~N~l~-~ip~~~~~l~ 444 (520)
T 2z7x_B 369 MTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP---PRIKVLDLHSNKIK-SIPKQVVKLE 444 (520)
T ss_dssp HHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC---TTCCEEECCSSCCC-CCCGGGGGCT
T ss_pred HHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc---ccCCEEECCCCccc-ccchhhhcCC
Confidence 44445555555555555544222 2344555555555555555544443332 34555555555555 3444444555
Q ss_pred ccceeeccCCccCCCCCccccccccccccccccccccc
Q 002069 458 SLIQLILNNNELSGQLSPELGSLNQLEYLDLSANTFHN 495 (973)
Q Consensus 458 ~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~i~~ 495 (973)
+|++|++++|++++..+..+..+++|++|++++|++++
T Consensus 445 ~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c 482 (520)
T 2z7x_B 445 ALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 482 (520)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCcc
Confidence 66666666666654333336666666666666666654
No 23
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.6e-50 Score=486.22 Aligned_cols=431 Identities=22% Similarity=0.294 Sum_probs=216.8
Q ss_pred CcEEeCCCCCCCCCCCcccCCCCCCCEEECCCCccc------c------cCCcCccCCCCCCeeeccCCcCCCCCCCccc
Q 002069 2 LKVLGLSFNQFSGSIPPEIGHLTHLKLLSFSKNQLS------G------LIPHEIGRLSSLNGLSLYSNFLKGSIPPSLG 69 (973)
Q Consensus 2 l~~L~l~~~~l~~~~p~~~~~l~~L~~L~l~~n~l~------~------~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~ 69 (973)
++.|+|++++++|.+|++++.|++|++|+|++|.+. + .+|.+. +..|+ ++++.|.+.+.+|..+.
T Consensus 83 V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~ 159 (636)
T 4eco_A 83 VTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFS 159 (636)
T ss_dssp EEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSC
T ss_pred EEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHH
Confidence 578999999999999999999999999999999762 1 122221 23333 44444444444443333
Q ss_pred CC-C------------------CCcEEEcc--CCcCcccCCccccCccccceeeccCCcCCCC-----------------
Q 002069 70 NL-T------------------SLIYIDIG--NNLLSGSIPNEVGSLKSLSDLRLSNNSLNGS----------------- 111 (973)
Q Consensus 70 ~l-~------------------~L~~L~l~--~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~----------------- 111 (973)
.+ . .++.+.+. +|++++ +|..++++++|++|+|++|++++.
T Consensus 160 ~~~~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ 238 (636)
T 4eco_A 160 DLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQY 238 (636)
T ss_dssp HHHHHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHH
T ss_pred HHHHHHhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhccc
Confidence 10 0 11111111 344443 444444444444444444444432
Q ss_pred CCCccc--cCCccceeecccccccccCcccccccCCCCceecccCC-CCC-CCCccccCc------cccceeeecccccC
Q 002069 112 IPSSLG--NLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNT-LSG-AIPFSLGNL------TNLVTLYIGINALS 181 (973)
Q Consensus 112 ~p~~~~--~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~-l~~-~~p~~l~~l------~~L~~L~l~~n~l~ 181 (973)
+|..++ ++++|++|+|++|++.+.+|+.|+++++|++|++++|+ +++ .+|..++.+ ++|++|++++|+++
T Consensus 239 ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~ 318 (636)
T 4eco_A 239 KTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK 318 (636)
T ss_dssp TTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS
T ss_pred CchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC
Confidence 444444 44444444444444444444444444444444444444 443 344444433 44444444444444
Q ss_pred CCCCc--cccccCccceeeccccccccccccccCCCCcccEEecCCcccCCCCCcccccccc-ccceecccccccCCCCc
Q 002069 182 GSIPN--EIGNLKSLSDLRLDYNTLSGSILYSFGNLTKLEILYLDVNALSGLIPNEIGNLKS-LLALQLNYNTLSGSIPC 258 (973)
Q Consensus 182 ~~~p~--~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~-L~~L~L~~N~l~~~~~~ 258 (973)
.+|. .++++++|++|++++|++++..+ .|+.+++|+.|++++|+++. .|..+.++++ |++|++++|+++ .+|.
T Consensus 319 -~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~~-lp~~l~~l~~~L~~L~Ls~N~l~-~lp~ 394 (636)
T 4eco_A 319 -TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQITE-IPANFCGFTEQVENLSFAHNKLK-YIPN 394 (636)
T ss_dssp -SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEEE-CCTTSEEECTTCCEEECCSSCCS-SCCS
T ss_pred -ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCcccc-ccHhhhhhcccCcEEEccCCcCc-ccch
Confidence 3444 44444444444444444443222 44444444444444444442 2334444444 444444444444 2333
Q ss_pred ccCCcc--hhhhccCCCcccCchhhhhhc-------cccccceEEcccccccCCcCchhhcCCccceeeccccccCCCCC
Q 002069 259 SFGNLT--KLVISCLGTNALSSSILEEIG-------NLKSLLHLQLNYNTLSGSIPLSLGSLTNLATLYFSTNALSGSIP 329 (973)
Q Consensus 259 ~~~~l~--~L~~l~l~~n~i~~~~~~~~~-------~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 329 (973)
.+..+. +|+.+++++|.+....+..|. .+++|++|++++|+++...+..+..+++|++|++++|.++...+
T Consensus 395 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~ 474 (636)
T 4eco_A 395 IFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPK 474 (636)
T ss_dssp CCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCS
T ss_pred hhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCH
Confidence 333222 333333333333333333333 44456666666666664333344455666666666666653222
Q ss_pred ccccCC-------CCCCcEEcCCCCCCCcchhccC--CCCCCcEEEccCCcccCCCCcccccccccchhcc------ccc
Q 002069 330 NEITNL-------RSLSDLQLSENTLNGSIPLALG--NLTKLVSLDLSINKLSGSIPLSFASLTSLTTLYL------YEN 394 (973)
Q Consensus 330 ~~~~~l-------~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L------~~N 394 (973)
..+... ++|++|+|++|+++ .+|..+. .+++|++|+|++|++++ .|..+..+++|+.|+| ++|
T Consensus 475 ~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N 552 (636)
T 4eco_A 475 NSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGN 552 (636)
T ss_dssp SSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCC
T ss_pred HHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccC
Confidence 222222 25666666666665 4444444 56666666666666664 5555556666666666 345
Q ss_pred ccccCCCcccCCCCCCCEEEccCCCCCCCcchhhhhhcccceEEEeeCcccc
Q 002069 395 SLCDSIPKEIGDMKSLSILDLSSNKLNGSIPLSLANLTNSLKVLYLSSNHIV 446 (973)
Q Consensus 395 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~L~~n~l~ 446 (973)
++.+..|..+..+++|++|+|++|++ +.+|..+. ++|++|++++|.+.
T Consensus 553 ~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~---~~L~~L~Ls~N~l~ 600 (636)
T 4eco_A 553 RTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT---PNISVLDIKDNPNI 600 (636)
T ss_dssp BCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC---TTCCEEECCSCTTC
T ss_pred cccccChHHHhcCCCCCEEECCCCcC-CccCHhHh---CcCCEEECcCCCCc
Confidence 55555555555566666666666665 24554433 34555555555554
No 24
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=4.3e-49 Score=479.82 Aligned_cols=414 Identities=24% Similarity=0.274 Sum_probs=284.1
Q ss_pred CcEEeCCCCCCCCCCCcccCCCCCCCEEEC-CCCcccccCCcCc------------------------------------
Q 002069 2 LKVLGLSFNQFSGSIPPEIGHLTHLKLLSF-SKNQLSGLIPHEI------------------------------------ 44 (973)
Q Consensus 2 l~~L~l~~~~l~~~~p~~~~~l~~L~~L~l-~~n~l~~~~p~~~------------------------------------ 44 (973)
++.|+|++|+++|.+|++|+.|++|++|+| ++|.+.|..|..-
T Consensus 325 V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~ 404 (876)
T 4ecn_A 325 VTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLL 404 (876)
T ss_dssp EEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHH
T ss_pred EEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHH
Confidence 578999999999999999999999999999 8998877633221
Q ss_pred ---------------cCCCCCCeeeccC--CcCCCCCCCcccCCCCCcEEEccCCcCcc-----------------cCCc
Q 002069 45 ---------------GRLSSLNGLSLYS--NFLKGSIPPSLGNLTSLIYIDIGNNLLSG-----------------SIPN 90 (973)
Q Consensus 45 ---------------~~l~~L~~L~l~~--n~~~~~~p~~~~~l~~L~~L~l~~n~l~~-----------------~~p~ 90 (973)
.....++.+.+.. |++++ +|.+|+++++|++|+|++|++++ .+|.
T Consensus 405 ~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~ 483 (876)
T 4ecn_A 405 QDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENE 483 (876)
T ss_dssp HHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTS
T ss_pred HHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCCh
Confidence 1112333344433 67775 77778888888888888888876 2777
Q ss_pred ccc--CccccceeeccCCcCCCCCCCccccCCccceeeccccc-ccc-cCcccccccC-------CCCceecccCCCCCC
Q 002069 91 EVG--SLKSLSDLRLSNNSLNGSIPSSLGNLTNLVTLYLHMNA-LSG-SIPDEIGNLK-------FLSDLQVSYNTLSGA 159 (973)
Q Consensus 91 ~~~--~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~-l~~-~~p~~~~~l~-------~L~~L~l~~N~l~~~ 159 (973)
.++ ++++|++|+|++|++.+.+|..|+++++|++|+|++|+ +++ .+|..|++++ +|++|++++|.++ .
T Consensus 484 ~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ 562 (876)
T 4ecn_A 484 ELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-E 562 (876)
T ss_dssp CCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-B
T ss_pred hhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-c
Confidence 766 77777778887777777777777777777777777777 776 6777666665 7777777777777 6
Q ss_pred CCc--cccCccccceeeecccccCCCCCccccccCccceeeccccccccccccccCCCCc-ccEEecCCcccCCCCCccc
Q 002069 160 IPF--SLGNLTNLVTLYIGINALSGSIPNEIGNLKSLSDLRLDYNTLSGSILYSFGNLTK-LEILYLDVNALSGLIPNEI 236 (973)
Q Consensus 160 ~p~--~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~L~~n~i~~~~~~~~ 236 (973)
+|. .|+++++|+.|++++|+++ .+| .++.+++|+.|+|++|+++ ..+..+.++++ |+.|+|++|.++. .|..+
T Consensus 563 ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~~-lp~~~ 638 (876)
T 4ecn_A 563 FPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLKY-IPNIF 638 (876)
T ss_dssp CCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCCS-CCSCC
T ss_pred cCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCCc-Cchhh
Confidence 666 7777777777777777777 666 7777777777777777777 44455777777 7777777777774 35666
Q ss_pred ccccc--ccceecccccccCCCCcccCCcchhhhccCCCcccCchhhhhhccccccceEEcccccccCCcCchhhcCCcc
Q 002069 237 GNLKS--LLALQLNYNTLSGSIPCSFGNLTKLVISCLGTNALSSSILEEIGNLKSLLHLQLNYNTLSGSIPLSLGSLTNL 314 (973)
Q Consensus 237 ~~l~~--L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 314 (973)
..++. |+.|+|++|++++.+|.....+. ...+++|+.|++++|.++...+..+..+++|
T Consensus 639 ~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~-------------------~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L 699 (876)
T 4ecn_A 639 NAKSVYVMGSVDFSYNKIGSEGRNISCSMD-------------------DYKGINASTVTLSYNEIQKFPTELFATGSPI 699 (876)
T ss_dssp CTTCSSCEEEEECCSSCTTTTSSSCSSCTT-------------------TCCCCCEEEEECCSSCCCSCCHHHHHTTCCC
T ss_pred hccccCCCCEEECcCCcCCCccccchhhhc-------------------cccCCCcCEEEccCCcCCccCHHHHccCCCC
Confidence 65543 77777777777665443221110 1123477888888888874433444577888
Q ss_pred ceeeccccccCCCCCccccC-------CCCCCcEEcCCCCCCCcchhccC--CCCCCcEEEccCCcccCCCCcccccccc
Q 002069 315 ATLYFSTNALSGSIPNEITN-------LRSLSDLQLSENTLNGSIPLALG--NLTKLVSLDLSINKLSGSIPLSFASLTS 385 (973)
Q Consensus 315 ~~L~L~~n~l~~~~~~~~~~-------l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~Ls~N~i~~~~~~~~~~l~~ 385 (973)
+.|+|++|.++...+..+.. +++|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+..+++
T Consensus 700 ~~L~Ls~N~L~~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~ 777 (876)
T 4ecn_A 700 STIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQ 777 (876)
T ss_dssp SEEECCSCCCSCCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTT
T ss_pred CEEECCCCcCCccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCC
Confidence 88888888887433333332 237888888888888 5666665 88888888888888886 6777888888
Q ss_pred cchhcccc------cccccCCCcccCCCCCCCEEEccCCCCCCCcchhhhhhcccceEEEeeCcccc
Q 002069 386 LTTLYLYE------NSLCDSIPKEIGDMKSLSILDLSSNKLNGSIPLSLANLTNSLKVLYLSSNHIV 446 (973)
Q Consensus 386 L~~L~L~~------N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~L~~n~l~ 446 (973)
|+.|+|++ |++.+.+|..|.++++|+.|+|++|++ +.+|..+. ++|+.|+|++|++.
T Consensus 778 L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~---~~L~~LdLs~N~l~ 840 (876)
T 4ecn_A 778 LKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT---PQLYILDIADNPNI 840 (876)
T ss_dssp CCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC---SSSCEEECCSCTTC
T ss_pred CCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc---CCCCEEECCCCCCC
Confidence 88888876 444455555555555555555555555 34444432 24444444444444
No 25
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=9.9e-49 Score=412.44 Aligned_cols=247 Identities=23% Similarity=0.309 Sum_probs=191.3
Q ss_pred cCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEEE
Q 002069 701 KNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVVY 779 (973)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 779 (973)
++|++.+.||+|+||+||+|.. .+|+.||||++...........+.+.+|+.++++++|||||++++++.+++..|+||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 6899999999999999999965 479999999997655444445678999999999999999999999999999999999
Q ss_pred EecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccCC
Q 002069 780 EYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKLG 859 (973)
Q Consensus 780 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 859 (973)
||+ +|+|.+++.+. ..+++.++..++.||+.|++|||++ +|+||||||+|||++.++.+||+|||+|+.....
T Consensus 93 Ey~-~g~L~~~l~~~---~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~ 165 (275)
T 3hyh_A 93 EYA-GNELFDYIVQR---DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 165 (275)
T ss_dssp ECC-CEEHHHHHHHS---CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC------
T ss_pred eCC-CCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCCC
Confidence 999 68999998754 3689999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCcccccccccCcccccccccCCC-CCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCC--CCCCCc
Q 002069 860 LSNRTELAGTFGYIAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDP--RLPTPL 936 (973)
Q Consensus 860 ~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 936 (973)
.......||+.|||||++.+..+ +.++||||+||++|||+||+.||...... ......... .++..
T Consensus 166 -~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~---------~~~~~i~~~~~~~p~~- 234 (275)
T 3hyh_A 166 -NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP---------VLFKNISNGVYTLPKF- 234 (275)
T ss_dssp ----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---------HHHHHHHHTCCCCCTT-
T ss_pred -CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHH---------HHHHHHHcCCCCCCCC-
Confidence 33445789999999999998876 57999999999999999999999743311 111111111 12221
Q ss_pred hhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 937 RNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 937 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
.+..+.+++.+||+.||++|||++|+++.
T Consensus 235 -----~s~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 235 -----LSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp -----SCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred -----CCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 23356789999999999999999999873
No 26
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.6e-48 Score=460.15 Aligned_cols=454 Identities=20% Similarity=0.222 Sum_probs=290.8
Q ss_pred CEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCcccCCccccCccccceeeccCC
Q 002069 27 KLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSLSDLRLSNN 106 (973)
Q Consensus 27 ~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n 106 (973)
++||+++|+++ .+|..+. ++|++|+|++|++++..|.+|+++++|++|+|++|++++..|..|+.+++|++|+|++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 68999999998 5788777 89999999999999777788999999999999999999777889999999999999999
Q ss_pred cCCCCCCCccccCCccceeecccccccc-cCcccccccCCCCceecccCCCCCCCCccccCcccc--ceeeeccccc--C
Q 002069 107 SLNGSIPSSLGNLTNLVTLYLHMNALSG-SIPDEIGNLKFLSDLQVSYNTLSGAIPFSLGNLTNL--VTLYIGINAL--S 181 (973)
Q Consensus 107 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L--~~L~l~~n~l--~ 181 (973)
+++ .+|.. .+++|++|+|++|++++ .+|+.|+++++|++|++++|.+++ ..+..+++| +.|++++|.+ .
T Consensus 80 ~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~ 153 (520)
T 2z7x_B 80 KLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGE 153 (520)
T ss_dssp CCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTS
T ss_pred cee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeeccccccc
Confidence 998 67776 88999999999999986 467899999999999999999875 456777777 8888888888 6
Q ss_pred CCCCccccccC-ccceeecccccccc-ccccccCCCCcccEEecCCcc-------cCCCCCccccccccccceecccccc
Q 002069 182 GSIPNEIGNLK-SLSDLRLDYNTLSG-SILYSFGNLTKLEILYLDVNA-------LSGLIPNEIGNLKSLLALQLNYNTL 252 (973)
Q Consensus 182 ~~~p~~~~~l~-~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~n~-------i~~~~~~~~~~l~~L~~L~L~~N~l 252 (973)
+..|..+..+. +...+++++|++.+ +....+.++++|+.|++++|. +.+..| .++.+++|+.|++++|.+
T Consensus 154 ~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l 232 (520)
T 2z7x_B 154 KEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIET 232 (520)
T ss_dssp SCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEE
T ss_pred ccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhcccccccc
Confidence 67777777665 33345666666554 333455566666666666665 333322 455555555555555555
Q ss_pred cCCCCcccCCcchhhhccCCCcccCchhhhhhccccccceEEcccccccCCcCchh-----hcCCccceeeccccccCCC
Q 002069 253 SGSIPCSFGNLTKLVISCLGTNALSSSILEEIGNLKSLLHLQLNYNTLSGSIPLSL-----GSLTNLATLYFSTNALSGS 327 (973)
Q Consensus 253 ~~~~~~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~-----~~l~~L~~L~L~~n~l~~~ 327 (973)
++..+. ... .. ..+++|++|++++|++++.+|..+ +.+++|+.+++++|.+ .
T Consensus 233 ~~~~~~-------------------~~~-~~-~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~ 289 (520)
T 2z7x_B 233 TWNSFI-------------------RIL-QL-VWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--G 289 (520)
T ss_dssp EHHHHH-------------------HHH-HH-HHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--C
T ss_pred CHHHHH-------------------HHH-HH-hhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce--e
Confidence 421110 000 01 113467777777777776666666 6677777777777766 2
Q ss_pred CC-ccccCC---CCCCcEEcCCCCCCCcchhccCCCCCCcEEEccCCcccCCCCcccccccccchhccccccccc--CCC
Q 002069 328 IP-NEITNL---RSLSDLQLSENTLNGSIPLALGNLTKLVSLDLSINKLSGSIPLSFASLTSLTTLYLYENSLCD--SIP 401 (973)
Q Consensus 328 ~~-~~~~~l---~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~--~~~ 401 (973)
+| ..+..+ .+|+.|++++|.+.... .+..+++|++|++++|++++..|..+..+++|++|++++|++++ ..|
T Consensus 290 ~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~ 367 (520)
T 2z7x_B 290 FPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIA 367 (520)
T ss_dssp SCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHH
T ss_pred cchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccch
Confidence 33 344333 45666677666665321 12456666666666666666566666666666666666666654 334
Q ss_pred cccCCCCCCCEEEccCCCCCCCcchhhhhhcccceEEEeeCcccccccCCCCCCCcccceeeccCCccCCCCCccccccc
Q 002069 402 KEIGDMKSLSILDLSSNKLNGSIPLSLANLTNSLKVLYLSSNHIVGEIPLGHGKFSSLIQLILNNNELSGQLSPELGSLN 481 (973)
Q Consensus 402 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~l~~l~ 481 (973)
..++.+++|++|++++|++++.+|...+...++|++|++++|++++..+..+. ++|+.|++++|+++ .+|..+..++
T Consensus 368 ~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~ 444 (520)
T 2z7x_B 368 EMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLE 444 (520)
T ss_dssp HHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCT
T ss_pred HHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCC
Confidence 55666666666666666666445544222223555555555555544433322 34444444444444 3333333444
Q ss_pred ccccccccccccccccCccccccccccEEeecCccCC
Q 002069 482 QLEYLDLSANTFHNSIPESLGNLVKLHYLNLSNNQFS 518 (973)
Q Consensus 482 ~L~~L~Ls~N~i~~~~~~~l~~l~~L~~L~L~~N~l~ 518 (973)
+|++|++++|+|+...+..+..+++|++|++++|+++
T Consensus 445 ~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~ 481 (520)
T 2z7x_B 445 ALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWD 481 (520)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCc
Confidence 4444444444444221112444444444444444443
No 27
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.7e-49 Score=423.71 Aligned_cols=247 Identities=20% Similarity=0.285 Sum_probs=207.0
Q ss_pred cCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEEE
Q 002069 701 KNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVVY 779 (973)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 779 (973)
++|++.+.||+|+||+||+|+. .+|+.||||++...........+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5799999999999999999965 589999999986432222333578999999999999999999999999999999999
Q ss_pred EecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccCC
Q 002069 780 EYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKLG 859 (973)
Q Consensus 780 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 859 (973)
||++||+|.+++++. ..+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.+...
T Consensus 112 Ey~~gG~L~~~i~~~---~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~ 185 (311)
T 4aw0_A 112 SYAKNGELLKYIRKI---GSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 185 (311)
T ss_dssp CCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred ecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCCC
Confidence 999999999999754 3689999999999999999999999 9999999999999999999999999999987543
Q ss_pred C--CcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcC--CCCCCC
Q 002069 860 L--SNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLD--PRLPTP 935 (973)
Q Consensus 860 ~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 935 (973)
. ......+||+.|||||++.+..|+.++||||+||++|||+||+.||...... .....+.. ..++..
T Consensus 186 ~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~---------~~~~~i~~~~~~~p~~ 256 (311)
T 4aw0_A 186 SKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEG---------LIFAKIIKLEYDFPEK 256 (311)
T ss_dssp TTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHH---------HHHHHHHHTCCCCCTT
T ss_pred CCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH---------HHHHHHHcCCCCCCcc
Confidence 2 2345678999999999999999999999999999999999999999743321 11111111 122222
Q ss_pred chhhHHHHHHHHHHHhcccCCCCCCCCCHHHHH
Q 002069 936 LRNVQDKLISIMEVSISCLDESPTSRPTMQKVS 968 (973)
Q Consensus 936 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~ 968 (973)
.+.++.++|.+|++.||++|||++|+.
T Consensus 257 ------~s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 257 ------FFPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp ------CCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred ------cCHHHHHHHHHHccCCHhHCcChHHHc
Confidence 223467899999999999999999863
No 28
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=8.2e-49 Score=435.56 Aligned_cols=251 Identities=26% Similarity=0.386 Sum_probs=210.8
Q ss_pred hcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVV 778 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 778 (973)
.+.|++.+.||+|+||+||+|.. .+|+.||||++....... .+.+.+|+.+|++++|||||++++++.+++..|+|
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~---~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iV 226 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR---RELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVV 226 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSS---GGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhH---HHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEE
Confidence 35799999999999999999965 589999999997543332 46688999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccC
Q 002069 779 YEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKL 858 (973)
Q Consensus 779 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 858 (973)
||||+||+|.++++.. .+++.++..++.||+.||+|||++ +|+||||||+|||++.+|.+||+|||+|+.+..
T Consensus 227 mEy~~gG~L~~~i~~~----~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~ 299 (423)
T 4fie_A 227 MEFLEGGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK 299 (423)
T ss_dssp EECCTTEEHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCS
T ss_pred EeCCCCCcHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCC
Confidence 9999999999999643 589999999999999999999999 999999999999999999999999999998876
Q ss_pred CCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCCchh
Q 002069 859 GLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLPTPLRN 938 (973)
Q Consensus 859 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 938 (973)
........+||+.|||||++.+..|+.++||||+||++|||++|+.||........ ...+.....+.+..
T Consensus 300 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~------~~~i~~~~~~~~~~---- 369 (423)
T 4fie_A 300 EVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA------MKMIRDNLPPRLKN---- 369 (423)
T ss_dssp SCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH------HHHHHHSCCCCCSC----
T ss_pred CCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH------HHHHHcCCCCCCcc----
Confidence 65566678999999999999999999999999999999999999999975432111 01111111222211
Q ss_pred hHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 939 VQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 939 ~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
....+..+.+++.+||+.||++|||++|+++.
T Consensus 370 ~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 370 LHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp TTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 11223457889999999999999999999863
No 29
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=4.2e-47 Score=460.48 Aligned_cols=530 Identities=21% Similarity=0.188 Sum_probs=277.9
Q ss_pred CCCCCCCCCCcccCCCCCCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCccc
Q 002069 8 SFNQFSGSIPPEIGHLTHLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGS 87 (973)
Q Consensus 8 ~~~~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~ 87 (973)
++.+++ .+|+.+. +++++|||++|+|++..|..|.++++|++|+|++|+|++..|++|++|++|++|+|++|++++.
T Consensus 39 ~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l 115 (635)
T 4g8a_A 39 MELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSL 115 (635)
T ss_dssp TTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEE
T ss_pred CCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCC
Confidence 344555 5665442 3566666666666655555666666666666666666644445566666666666666666644
Q ss_pred CCccccCccccceeeccCCcCCCCCCCccccCCccceeecccccccc-cCcccccccCCCCceecccCCCCCCCCccccC
Q 002069 88 IPNEVGSLKSLSDLRLSNNSLNGSIPSSLGNLTNLVTLYLHMNALSG-SIPDEIGNLKFLSDLQVSYNTLSGAIPFSLGN 166 (973)
Q Consensus 88 ~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~ 166 (973)
.|..|+++++|++|+|++|++++..+..|+++++|++|+|++|++++ ..|..++++++|++|++++|++++..|..|..
T Consensus 116 ~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~ 195 (635)
T 4g8a_A 116 ALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRV 195 (635)
T ss_dssp CGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHH
T ss_pred CHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccc
Confidence 44456666666666666666664444456666666666666666653 24555666666666666666666555555555
Q ss_pred ccccc----eeeecccccCCCCCccccccCccceeecccccccc-ccccccCCCCcccEEecCCcccC------CCCCcc
Q 002069 167 LTNLV----TLYIGINALSGSIPNEIGNLKSLSDLRLDYNTLSG-SILYSFGNLTKLEILYLDVNALS------GLIPNE 235 (973)
Q Consensus 167 l~~L~----~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~n~i~------~~~~~~ 235 (973)
+.+++ .++++.|.++.. +........++.+++++|.... +....+.++..++...+..+... ......
T Consensus 196 L~~l~~~~~~~~ls~n~l~~i-~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~ 274 (635)
T 4g8a_A 196 LHQMPLLNLSLDLSLNPMNFI-QPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSA 274 (635)
T ss_dssp HHTCTTCCCEEECTTCCCCEE-CTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTT
T ss_pred hhhhhhhhhhhhcccCccccc-CcccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccc
Confidence 54433 344555555532 2222233344555555554331 22233444444444443322211 111222
Q ss_pred ccccccccceecccccccCCCCcccCCcchhhhccCCCcccCchhhhhhccccccceEEcccccccCCcCchhhcCCccc
Q 002069 236 IGNLKSLLALQLNYNTLSGSIPCSFGNLTKLVISCLGTNALSSSILEEIGNLKSLLHLQLNYNTLSGSIPLSLGSLTNLA 315 (973)
Q Consensus 236 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 315 (973)
+..+..+...++..+..... .......+..+.+++.+++.++.+.... .+.....|+
T Consensus 275 ~~~~~~l~~~~l~~~~~~~~---------------------~~~~~~~~~~~~~l~~l~~~~~~~~~~~--~~~~~~~L~ 331 (635)
T 4g8a_A 275 LEGLCNLTIEEFRLAYLDYY---------------------LDGIIDLFNCLTNVSSFSLVSVTIERVK--DFSYNFGWQ 331 (635)
T ss_dssp TGGGGGSEEEEEEEECCCSC---------------------EEECTTTTGGGTTCSEEEEESCEEEECG--GGGSCCCCS
T ss_pred cccccchhhhhhhhhhhccc---------------------ccchhhhhhhhccccccccccccccccc--ccccchhhh
Confidence 22222222222222221100 0011223444455566666666554322 244445566
Q ss_pred eeeccccccCCCCCccccCCCCCCcEEcCCCCCCCcchhccCCCCCCcEEEccCCcccC--CCCcccccccccchhcccc
Q 002069 316 TLYFSTNALSGSIPNEITNLRSLSDLQLSENTLNGSIPLALGNLTKLVSLDLSINKLSG--SIPLSFASLTSLTTLYLYE 393 (973)
Q Consensus 316 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~--~~~~~~~~l~~L~~L~L~~ 393 (973)
.|++++|.+....+ ..+..|+.+++..|.+... .....+++|+.|++++|.+.. ..+..+..+.+|+.|+++.
T Consensus 332 ~L~l~~~~~~~~~~---~~l~~L~~l~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~ 406 (635)
T 4g8a_A 332 HLELVNCKFGQFPT---LKLKSLKRLTFTSNKGGNA--FSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSF 406 (635)
T ss_dssp EEEEESCEESSCCC---CBCTTCCEEEEESCCSCCB--CCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCS
T ss_pred hhhcccccccCcCc---ccchhhhhcccccccCCCC--cccccccccccchhhccccccccccccchhhhhhhhhhhccc
Confidence 66666666553322 2344555666666655422 223345566666666665542 2233334445555555555
Q ss_pred cccccCCCcccCCCCCCCEEEccCCCCCCCcchhhhhhcccceEEEeeCcccccccCCCCCCCcccceeeccCCccCCCC
Q 002069 394 NSLCDSIPKEIGDMKSLSILDLSSNKLNGSIPLSLANLTNSLKVLYLSSNHIVGEIPLGHGKFSSLIQLILNNNELSGQL 473 (973)
Q Consensus 394 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~ 473 (973)
|.+.. .+..+..+++|+.+++++|......+. ..+..+++++.++++.|.+.+..
T Consensus 407 ~~~~~-~~~~~~~l~~L~~l~l~~~~~~~~~~~------------------------~~~~~l~~l~~l~ls~n~l~~~~ 461 (635)
T 4g8a_A 407 NGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEF------------------------SVFLSLRNLIYLDISHTHTRVAF 461 (635)
T ss_dssp CSEEE-ECSCCTTCTTCCEEECTTSEEESTTSS------------------------CTTTTCTTCCEEECTTSCCEECC
T ss_pred ccccc-ccccccccccccchhhhhccccccccc------------------------ccccccccccccccccccccccc
Confidence 55433 333444555555555555544333222 23344455555555555555455
Q ss_pred Ccccccccccccccccccccc-cccCccccccccccEEeecCccCCCCCCcccccccccCeecccccccCCCcchhhccc
Q 002069 474 SPELGSLNQLEYLDLSANTFH-NSIPESLGNLVKLHYLNLSNNQFSQKIPNPIEKLIHLSELDLSYKIFGEEIPSQVCSM 552 (973)
Q Consensus 474 ~~~l~~l~~L~~L~Ls~N~i~-~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~i~~~~~~~~~~l 552 (973)
+..+..++.|+.|++++|.+. ...|..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+
T Consensus 462 ~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l 541 (635)
T 4g8a_A 462 NGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCL 541 (635)
T ss_dssp TTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTC
T ss_pred ccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCC
Confidence 555555555555555555533 2345555556666666666666665555566666666666666666666556666666
Q ss_pred ccccccccccccccCccchhhhcc-ccccEEeCcCCCCCCCCC
Q 002069 553 QSLEKLNLSHNNLSGSISRCFEEM-HWLSCIDISYNALQGLIP 594 (973)
Q Consensus 553 ~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~l~l~~N~l~~~~~ 594 (973)
++|++|+|++|+|++..+..+..+ +.|++|++++|+|++.+.
T Consensus 542 ~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 542 NSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp TTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred CCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 666666666666666666666665 456777777777766654
No 30
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=2.3e-48 Score=413.53 Aligned_cols=248 Identities=22% Similarity=0.325 Sum_probs=198.5
Q ss_pred CcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeec----cceeEE
Q 002069 703 FDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSH----ALHSFV 777 (973)
Q Consensus 703 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~l 777 (973)
|++.++||+|+||+||+|.+ .+++.||||++...... ....+.|.+|+.++++++|||||++++++.+ +...|+
T Consensus 28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~-~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~l 106 (290)
T 3fpq_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT-KSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCC-HHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEE
Confidence 36677899999999999965 47899999998754332 2346789999999999999999999999864 346799
Q ss_pred EEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCC--eEeecCCCCCeeecC-CCceEEecccccc
Q 002069 778 VYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPP--IVHRDISSKNVLLNL-EYEAHVSDFGISK 854 (973)
Q Consensus 778 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~--i~H~Dlk~~Nill~~-~~~~kl~Dfg~a~ 854 (973)
|||||++|+|.+++++. ..+++..+..++.||+.||+|||++ + |+||||||+|||++. ++.+||+|||+|+
T Consensus 107 vmEy~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~ylH~~---~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~ 180 (290)
T 3fpq_A 107 VTELMTSGTLKTYLKRF---KVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180 (290)
T ss_dssp EEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCCCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred EEeCCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCCEEecccChhheeEECCCCCEEEEeCcCCE
Confidence 99999999999999753 4689999999999999999999998 6 999999999999974 7999999999998
Q ss_pred cccCCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCC
Q 002069 855 FLKLGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLPT 934 (973)
Q Consensus 855 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 934 (973)
.... .......||+.|||||++.+ +|+.++|||||||++|||+||+.||........ ....+.....+.
T Consensus 181 ~~~~--~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~--------~~~~i~~~~~~~ 249 (290)
T 3fpq_A 181 LKRA--SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ--------IYRRVTSGVKPA 249 (290)
T ss_dssp GCCT--TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH--------HHHHHTTTCCCG
T ss_pred eCCC--CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHH--------HHHHHHcCCCCC
Confidence 6443 33456789999999998865 699999999999999999999999964332111 111111111111
Q ss_pred CchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 935 PLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 935 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
... ...+.++.+++.+||+.||++|||++|+++.
T Consensus 250 ~~~--~~~~~~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 250 SFD--KVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp GGG--GCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CCC--ccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 111 1122357889999999999999999999873
No 31
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=2.3e-47 Score=462.76 Aligned_cols=534 Identities=24% Similarity=0.223 Sum_probs=352.7
Q ss_pred CEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCcccCCccccCccccceeeccCC
Q 002069 27 KLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSLSDLRLSNN 106 (973)
Q Consensus 27 ~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n 106 (973)
++.+-++-+++ .+|..+. +++++|+|++|+|++..|.+|+++++|++|||++|++++..|..|++|++|++|+|++|
T Consensus 34 ~~~~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N 110 (635)
T 4g8a_A 34 ITYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGN 110 (635)
T ss_dssp TEEECTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTC
T ss_pred CEEECCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCC
Confidence 34555555665 4565443 35667777777766444456666777777777777666545556666666777777666
Q ss_pred cCCCCCCCccccCCccceeecccccccccCcccccccCCCCceecccCCCCC-CCCccccCccccceeeecccccCCCCC
Q 002069 107 SLNGSIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSG-AIPFSLGNLTNLVTLYIGINALSGSIP 185 (973)
Q Consensus 107 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~p~~l~~l~~L~~L~l~~n~l~~~~p 185 (973)
+|++..|..|.++++|++|+|++|++++..+..|+++++|++|++++|.+++ ..|..++.+++|++|++++|++++..|
T Consensus 111 ~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 190 (635)
T 4g8a_A 111 PIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYC 190 (635)
T ss_dssp CCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECG
T ss_pred cCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCcccccccc
Confidence 6664444556666666666666666665444556666666666666666653 235555666666666666666665555
Q ss_pred ccccccCccc----eeeccccccccccccccCCCCcccEEecCCcccCC-CCCccccccccccceecccccccCCCCccc
Q 002069 186 NEIGNLKSLS----DLRLDYNTLSGSILYSFGNLTKLEILYLDVNALSG-LIPNEIGNLKSLLALQLNYNTLSGSIPCSF 260 (973)
Q Consensus 186 ~~~~~l~~L~----~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 260 (973)
..+..+.+++ .++++.|.+..+.+..+.. ..++.+++.+|.... ..+..+.++..++...+..+....
T Consensus 191 ~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~-~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~------ 263 (635)
T 4g8a_A 191 TDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKE-IRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRN------ 263 (635)
T ss_dssp GGGHHHHTCTTCCCEEECTTCCCCEECTTTTTT-CEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTT------
T ss_pred ccccchhhhhhhhhhhhcccCcccccCcccccc-hhhhhhhhhcccccccccchhhcCCccccccccccccccc------
Confidence 5555444333 3444555554443333322 233444444443221 111222333333332222221110
Q ss_pred CCcchhhhccCCCcccCchhhhhhccccccceEEcccccccCCcCchhhcCCccceeeccccccCC---CCCccccCCCC
Q 002069 261 GNLTKLVISCLGTNALSSSILEEIGNLKSLLHLQLNYNTLSGSIPLSLGSLTNLATLYFSTNALSG---SIPNEITNLRS 337 (973)
Q Consensus 261 ~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~---~~~~~~~~l~~ 337 (973)
...+.......+..+..+....+..+.... ..+..+..+.+
T Consensus 264 ------------------------------------~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~ 307 (635)
T 4g8a_A 264 ------------------------------------EGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTN 307 (635)
T ss_dssp ------------------------------------SCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTT
T ss_pred ------------------------------------ccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhcc
Confidence 001111122223333333333333332221 22334555667
Q ss_pred CCcEEcCCCCCCCcchhccCCCCCCcEEEccCCcccCCCCcccccccccchhcccccccccCCCcccCCCCCCCEEEccC
Q 002069 338 LSDLQLSENTLNGSIPLALGNLTKLVSLDLSINKLSGSIPLSFASLTSLTTLYLYENSLCDSIPKEIGDMKSLSILDLSS 417 (973)
Q Consensus 338 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 417 (973)
++.+.+.+|.+.... .+.....|+.|++++|.+....+. .+..|+.+++..|.+... .....+++|+.|++++
T Consensus 308 l~~l~~~~~~~~~~~--~~~~~~~L~~L~l~~~~~~~~~~~---~l~~L~~l~l~~n~~~~~--~~~~~l~~L~~L~ls~ 380 (635)
T 4g8a_A 308 VSSFSLVSVTIERVK--DFSYNFGWQHLELVNCKFGQFPTL---KLKSLKRLTFTSNKGGNA--FSEVDLPSLEFLDLSR 380 (635)
T ss_dssp CSEEEEESCEEEECG--GGGSCCCCSEEEEESCEESSCCCC---BCTTCCEEEEESCCSCCB--CCCCBCTTCCEEECCS
T ss_pred ccccccccccccccc--ccccchhhhhhhcccccccCcCcc---cchhhhhcccccccCCCC--cccccccccccchhhc
Confidence 777777777665332 345566788888888877754443 345677777887776543 2345688899999999
Q ss_pred CCCCC--CcchhhhhhcccceEEEeeCcccccccCCCCCCCcccceeeccCCccCCC-CCcccccccccccccccccccc
Q 002069 418 NKLNG--SIPLSLANLTNSLKVLYLSSNHIVGEIPLGHGKFSSLIQLILNNNELSGQ-LSPELGSLNQLEYLDLSANTFH 494 (973)
Q Consensus 418 N~l~~--~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~N~l~~~-~~~~l~~l~~L~~L~Ls~N~i~ 494 (973)
|.+.. ..+..+.... +|+.++++.|.+.. .+..+..+++|+.+++++|..... ....+..+.+++.++++.|.+.
T Consensus 381 n~l~~~~~~~~~~~~~~-~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~ 458 (635)
T 4g8a_A 381 NGLSFKGCCSQSDFGTI-SLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTR 458 (635)
T ss_dssp SCCBEEEECCHHHHSCS-CCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCE
T ss_pred cccccccccccchhhhh-hhhhhhcccccccc-ccccccccccccchhhhhccccccccccccccccccccccccccccc
Confidence 98863 2344444444 79999999998874 455677889999999998887654 3467888999999999999999
Q ss_pred cccCccccccccccEEeecCccC-CCCCCcccccccccCeecccccccCCCcchhhcccccccccccccccccCccchhh
Q 002069 495 NSIPESLGNLVKLHYLNLSNNQF-SQKIPNPIEKLIHLSELDLSYKIFGEEIPSQVCSMQSLEKLNLSHNNLSGSISRCF 573 (973)
Q Consensus 495 ~~~~~~l~~l~~L~~L~L~~N~l-~~~~~~~~~~l~~L~~L~ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 573 (973)
...+..+..++.|+.|+|++|.+ ....|..|..+++|++|||++|.|++..|..|..+++|++|+|++|+|++..+..|
T Consensus 459 ~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~ 538 (635)
T 4g8a_A 459 VAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPY 538 (635)
T ss_dssp ECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGG
T ss_pred cccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHH
Confidence 88899999999999999999985 44678899999999999999999999999999999999999999999999999999
Q ss_pred hccccccEEeCcCCCCCCCCCCCc-cC-CCCCcchhcCCCCccC
Q 002069 574 EEMHWLSCIDISYNALQGLIPNST-AF-RDAPMLALQGNKRLCG 615 (973)
Q Consensus 574 ~~l~~L~~l~l~~N~l~~~~~~~~-~~-~~~~~~~~~~N~~~c~ 615 (973)
..+++|++||+++|++++.+|... .+ ..+..+.+.+|||.|+
T Consensus 539 ~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~ 582 (635)
T 4g8a_A 539 KCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 582 (635)
T ss_dssp TTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCS
T ss_pred hCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCccc
Confidence 999999999999999999988743 33 5688899999999996
No 32
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=9.9e-49 Score=423.20 Aligned_cols=248 Identities=22% Similarity=0.239 Sum_probs=200.0
Q ss_pred hcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVV 778 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 778 (973)
.+.|++.++||+|+||+||+|++ .+|+.||||+++.... ..+|+.++++++|||||++++++.+++..|+|
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~--------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~iv 128 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF--------RVEELVACAGLSSPRIVPLYGAVREGPWVNIF 128 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh--------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 35688889999999999999965 5799999999975322 23699999999999999999999999999999
Q ss_pred EEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCC-ceEEeccccccccc
Q 002069 779 YEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEY-EAHVSDFGISKFLK 857 (973)
Q Consensus 779 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~-~~kl~Dfg~a~~~~ 857 (973)
|||++||+|.+++++. ..+++.++..++.||+.||+|||++ +|+||||||+|||++.+| ++||+|||+|+...
T Consensus 129 mEy~~gg~L~~~l~~~---~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~ 202 (336)
T 4g3f_A 129 MELLEGGSLGQLIKQM---GCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQ 202 (336)
T ss_dssp ECCCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC-
T ss_pred EeccCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEcc
Confidence 9999999999999754 3689999999999999999999999 999999999999999987 69999999999776
Q ss_pred CCCC-----cccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCC
Q 002069 858 LGLS-----NRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRL 932 (973)
Q Consensus 858 ~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 932 (973)
.... .....+||+.|||||++.+..|+.++||||+||++|||+||+.||...... .....+.....
T Consensus 203 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~---------~~~~~i~~~~~ 273 (336)
T 4g3f_A 203 PDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRG---------PLCLKIASEPP 273 (336)
T ss_dssp -----------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCS---------CCHHHHHHSCC
T ss_pred CCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH---------HHHHHHHcCCC
Confidence 4322 123357999999999999999999999999999999999999999743311 00011111110
Q ss_pred CCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHh
Q 002069 933 PTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLL 971 (973)
Q Consensus 933 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L 971 (973)
+ ........+..+.+++.+||+.||.+|||++|+++.+
T Consensus 274 ~-~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l 311 (336)
T 4g3f_A 274 P-IREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKV 311 (336)
T ss_dssp G-GGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred C-chhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHH
Confidence 0 0000112334577899999999999999999998876
No 33
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=5.9e-48 Score=417.42 Aligned_cols=262 Identities=22% Similarity=0.303 Sum_probs=200.4
Q ss_pred cCCcccccccCCCceeEEEEEcCCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccc----eeE
Q 002069 701 KNFDDEHCIGNGGQGSVYKAELPTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHAL----HSF 776 (973)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----~~~ 776 (973)
++|.+.++||+|+||+||+|++ +|+.||||++... ......+..|+..+.+++|||||+++|+|.+++ ..|
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~----~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~ 77 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGG----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECcc----chhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEE
Confidence 4688889999999999999988 6899999998632 121233345666677899999999999997653 579
Q ss_pred EEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCC-----CCCeEeecCCCCCeeecCCCceEEeccc
Q 002069 777 VVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNC-----FPPIVHRDISSKNVLLNLEYEAHVSDFG 851 (973)
Q Consensus 777 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~-----~~~i~H~Dlk~~Nill~~~~~~kl~Dfg 851 (973)
+|||||++|+|.++++.. .+++.++.+++.|+|.|++|||+++ .++|+||||||+|||++.++++||+|||
T Consensus 78 lV~Ey~~~gsL~~~l~~~----~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFG 153 (303)
T 3hmm_A 78 LVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 153 (303)
T ss_dssp EEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCT
T ss_pred EEecCCCCCcHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCC
Confidence 999999999999999753 4789999999999999999999862 3489999999999999999999999999
Q ss_pred ccccccCCCCc----ccccccccCcccccccccC------CCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhh----
Q 002069 852 ISKFLKLGLSN----RTELAGTFGYIAPELAYTM------KVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLS---- 917 (973)
Q Consensus 852 ~a~~~~~~~~~----~~~~~g~~~y~aPE~~~~~------~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~---- 917 (973)
+|+........ .....||+.|||||++.+. .++.++|||||||++|||+||+.||...........
T Consensus 154 la~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~ 233 (303)
T 3hmm_A 154 LAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVP 233 (303)
T ss_dssp TCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSC
T ss_pred CCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhccc
Confidence 99877554322 2345799999999998764 367799999999999999999888754321111100
Q ss_pred --hhhhh----hhhhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 918 --SNLNI----ALDEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 918 --~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
..... ......++.++..... .+....+.+++.+||+.||++||||+||++.|+
T Consensus 234 ~~~~~~~~~~~~~~~~~rp~~p~~~~~-~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~ 293 (303)
T 3hmm_A 234 SDPSVEEMRKVVCEQKLRPNIPNRWQS-CEALRVMAKIMRECWYANGAARLTALRIKKTLS 293 (303)
T ss_dssp SSCCHHHHHHHHTTSCCCCCCCGGGGS-SHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHH
T ss_pred ccchHHHHHHHHhcccCCCCCCccccc-hHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHH
Confidence 01111 1223334444433222 245567889999999999999999999999875
No 34
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.7e-47 Score=465.93 Aligned_cols=441 Identities=22% Similarity=0.257 Sum_probs=299.6
Q ss_pred CCCCEEECCCCcccccCCcCccCCCCCCeeec-cCCcCCCCCCCcc----------------------------------
Q 002069 24 THLKLLSFSKNQLSGLIPHEIGRLSSLNGLSL-YSNFLKGSIPPSL---------------------------------- 68 (973)
Q Consensus 24 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l-~~n~~~~~~p~~~---------------------------------- 68 (973)
.+++.|+|++|.+.|.+|++|++|++|++|+| ++|.+.|..|-.-
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 56899999999999999999999999999999 8887765533211
Q ss_pred -----------------cCCCCCcEEEcc--CCcCcccCCccccCccccceeeccCCcCCC-----------------CC
Q 002069 69 -----------------GNLTSLIYIDIG--NNLLSGSIPNEVGSLKSLSDLRLSNNSLNG-----------------SI 112 (973)
Q Consensus 69 -----------------~~l~~L~~L~l~--~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-----------------~~ 112 (973)
.....++.+.++ .|++++ +|..|+++++|++|+|++|++++ .+
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~i 481 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYE 481 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccC
Confidence 111222233333 266664 66666666677777777776665 25
Q ss_pred CCccc--cCCccceeecccccccccCcccccccCCCCceecccCC-CCC-CCCccccCcc-------ccceeeecccccC
Q 002069 113 PSSLG--NLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNT-LSG-AIPFSLGNLT-------NLVTLYIGINALS 181 (973)
Q Consensus 113 p~~~~--~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~-l~~-~~p~~l~~l~-------~L~~L~l~~n~l~ 181 (973)
|..++ ++++|++|+|++|.+.+.+|..|+++++|++|+|++|+ +++ .+|..++.++ +|+.|++++|+++
T Consensus 482 P~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~ 561 (876)
T 4ecn_A 482 NEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE 561 (876)
T ss_dssp TSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC
T ss_pred ChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC
Confidence 66655 66666666666666666666666666666666666665 655 4555555444 6666666666666
Q ss_pred CCCCc--cccccCccceeeccccccccccccccCCCCcccEEecCCcccCCCCCcccccccc-ccceecccccccCCCCc
Q 002069 182 GSIPN--EIGNLKSLSDLRLDYNTLSGSILYSFGNLTKLEILYLDVNALSGLIPNEIGNLKS-LLALQLNYNTLSGSIPC 258 (973)
Q Consensus 182 ~~~p~--~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~-L~~L~L~~N~l~~~~~~ 258 (973)
.+|. .++++++|++|+|++|+++.++ .|+.+++|+.|+|++|+++ ..|..+.++++ |+.|+|++|+++ .+|.
T Consensus 562 -~ip~~~~l~~L~~L~~L~Ls~N~l~~lp--~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~ 636 (876)
T 4ecn_A 562 -EFPASASLQKMVKLGLLDCVHNKVRHLE--AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPN 636 (876)
T ss_dssp -BCCCHHHHTTCTTCCEEECTTSCCCBCC--CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCS
T ss_pred -ccCChhhhhcCCCCCEEECCCCCcccch--hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCch
Confidence 5555 5666666666666666666333 5666666666666666666 33555666665 666666666655 3333
Q ss_pred ccCCcchhhhccCCCcccCchhhhhhccc--cccceEEcccccccCCcCch---hh--cCCccceeeccccccCCCCCcc
Q 002069 259 SFGNLTKLVISCLGTNALSSSILEEIGNL--KSLLHLQLNYNTLSGSIPLS---LG--SLTNLATLYFSTNALSGSIPNE 331 (973)
Q Consensus 259 ~~~~l~~L~~l~l~~n~i~~~~~~~~~~l--~~L~~L~l~~n~l~~~~~~~---~~--~l~~L~~L~L~~n~l~~~~~~~ 331 (973)
.+..+ ++|+.|++++|++++.+|.. +. .+++|+.|++++|.++...+..
T Consensus 637 ------------------------~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~ 692 (876)
T 4ecn_A 637 ------------------------IFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTEL 692 (876)
T ss_dssp ------------------------CCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHH
T ss_pred ------------------------hhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHH
Confidence 33333 34899999999998765532 22 3458999999999999544444
Q ss_pred ccCCCCCCcEEcCCCCCCCcchhccCCC-------CCCcEEEccCCcccCCCCcccc--cccccchhcccccccccCCCc
Q 002069 332 ITNLRSLSDLQLSENTLNGSIPLALGNL-------TKLVSLDLSINKLSGSIPLSFA--SLTSLTTLYLYENSLCDSIPK 402 (973)
Q Consensus 332 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l-------~~L~~L~Ls~N~i~~~~~~~~~--~l~~L~~L~L~~N~l~~~~~~ 402 (973)
+..+++|+.|+|++|.++.+.+..+... ++|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|.
T Consensus 693 ~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~ 770 (876)
T 4ecn_A 693 FATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPT 770 (876)
T ss_dssp HHTTCCCSEEECCSCCCSCCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCC
T ss_pred HccCCCCCEEECCCCcCCccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cch
Confidence 5689999999999999995444444433 39999999999999 6777776 89999999999999988 788
Q ss_pred ccCCCCCCCEEEccCCCCCCCcchhhhhhcccceEEEeeCcccccccCCCCCCCcccceeeccCCccCCCCCcccccccc
Q 002069 403 EIGDMKSLSILDLSSNKLNGSIPLSLANLTNSLKVLYLSSNHIVGEIPLGHGKFSSLIQLILNNNELSGQLSPELGSLNQ 482 (973)
Q Consensus 403 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~l~~l~~ 482 (973)
.+..+++|+.|+|++|+ ++++|++.+.+|..+..+++|+.|+|++|++ +.+|..+. ++
T Consensus 771 ~l~~L~~L~~L~Ls~N~-------------------~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~ 828 (876)
T 4ecn_A 771 QPLNSSQLKAFGIRHQR-------------------DAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQ 828 (876)
T ss_dssp GGGGCTTCCEEECCCCB-------------------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SS
T ss_pred hhhcCCCCCEEECCCCC-------------------CcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CC
Confidence 89999999999998865 3455666666666666666666666666666 34555443 46
Q ss_pred cccccccccccccccCccccccccccEEeecCccCC
Q 002069 483 LEYLDLSANTFHNSIPESLGNLVKLHYLNLSNNQFS 518 (973)
Q Consensus 483 L~~L~Ls~N~i~~~~~~~l~~l~~L~~L~L~~N~l~ 518 (973)
|+.|||++|++....+..+.....+..+.|.+|++.
T Consensus 829 L~~LdLs~N~l~~i~~~~~~~~~~~~~~~L~~n~~~ 864 (876)
T 4ecn_A 829 LYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKTQ 864 (876)
T ss_dssp SCEEECCSCTTCEEECGGGHHHHHTTCCEEECCTTS
T ss_pred CCEEECCCCCCCccChHHccccccchheeecCCCcc
Confidence 777777777776555555555555666666666653
No 35
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.3e-48 Score=417.34 Aligned_cols=249 Identities=22% Similarity=0.282 Sum_probs=197.7
Q ss_pred cCCcccccccCCCceeEEEEEc----CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeE
Q 002069 701 KNFDDEHCIGNGGQGSVYKAEL----PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSF 776 (973)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 776 (973)
++|++.+.||+|+||+||+|+. .+++.||||+++....... ....+.+|++++++++|||||++++++.+++..|
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~-~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ 102 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVR-DRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLY 102 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEE-ECC------CCCCCCCCTTEECEEEEEEETTEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChH-HHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEE
Confidence 5799999999999999999964 2578999999875432221 2346888999999999999999999999999999
Q ss_pred EEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccc
Q 002069 777 VVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFL 856 (973)
Q Consensus 777 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~ 856 (973)
+||||++||+|.+++++. ..+++.++..++.||+.||+|||++ +|+||||||+|||++.+|.+||+|||+|+..
T Consensus 103 ivmEy~~gg~L~~~l~~~---~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~ 176 (304)
T 3ubd_A 103 LILDFLRGGDLFTRLSKE---VMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKES 176 (304)
T ss_dssp EEECCCTTCEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC-
T ss_pred EEEEcCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceec
Confidence 999999999999999754 3689999999999999999999999 9999999999999999999999999999876
Q ss_pred cCCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCCc
Q 002069 857 KLGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLPTPL 936 (973)
Q Consensus 857 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (973)
...........||+.|||||++.+..|+.++||||+||++|||+||+.||...... .....+.......+
T Consensus 177 ~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~---------~~~~~i~~~~~~~p- 246 (304)
T 3ubd_A 177 IDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRK---------ETMTMILKAKLGMP- 246 (304)
T ss_dssp ----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---------HHHHHHHHCCCCCC-
T ss_pred cCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHH---------HHHHHHHcCCCCCC-
Confidence 65545556678999999999999999999999999999999999999999754321 11111111111111
Q ss_pred hhhHHHHHHHHHHHhcccCCCCCCCCCH-----HHHHH
Q 002069 937 RNVQDKLISIMEVSISCLDESPTSRPTM-----QKVSQ 969 (973)
Q Consensus 937 ~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~ev~~ 969 (973)
. ..+.++.+++.+||+.||++|||+ +|+++
T Consensus 247 ~---~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 247 Q---FLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp T---TSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred C---cCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 1 123357789999999999999984 67764
No 36
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=3.9e-48 Score=424.53 Aligned_cols=263 Identities=22% Similarity=0.344 Sum_probs=211.7
Q ss_pred HHHHHHhcCCcccccccCCCceeEEEEEcC------CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCC-Cceeeec
Q 002069 694 EEIIRATKNFDDEHCIGNGGQGSVYKAELP------TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRH-RNIVKFY 766 (973)
Q Consensus 694 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~~~ 766 (973)
.+++...++|++.+.||+|+||+||+|.+. .++.||||+++..... ...++|.+|+.++++++| ||||+++
T Consensus 57 ~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~--~~~~~~~~E~~il~~l~hhpnIV~l~ 134 (353)
T 4ase_A 57 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH--SEHRALMSELKILIHIGHHLNVVNLL 134 (353)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCH--HHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccCh--HHHHHHHHHHHHHHHcCCCCcEEEEE
Confidence 444455688999999999999999999653 2368999999865332 346789999999999965 8999999
Q ss_pred eeeecc-ceeEEEEEecCCCChHHHhccCcc-------------ccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecC
Q 002069 767 GFCSHA-LHSFVVYEYLEMGSLAMILSNDAA-------------AEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDI 832 (973)
Q Consensus 767 ~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dl 832 (973)
|+|.++ +..++|||||++|+|.++++.... ...+++.++..++.|||.|++|||++ +||||||
T Consensus 135 g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDL 211 (353)
T 4ase_A 135 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDL 211 (353)
T ss_dssp EEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred EEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCcc
Confidence 999764 568999999999999999975432 24589999999999999999999999 9999999
Q ss_pred CCCCeeecCCCceEEecccccccccCCCC--cccccccccCcccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcch
Q 002069 833 SSKNVLLNLEYEAHVSDFGISKFLKLGLS--NRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFI 909 (973)
Q Consensus 833 k~~Nill~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~ 909 (973)
||+|||+++++.+||+|||+|+....+.. ......||+.|||||++.+..|+.++|||||||++|||+| |+.||...
T Consensus 212 K~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~ 291 (353)
T 4ase_A 212 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 291 (353)
T ss_dssp SGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred CccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCC
Confidence 99999999999999999999987754432 2334678999999999999999999999999999999998 99999753
Q ss_pred hhhhhhhhhhhhhhhhhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 910 SSICSSLSSNLNIALDEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
.... .....+.+...+..+.. .+.++.+++.+||+.||++||||+||+++|+
T Consensus 292 ~~~~-----~~~~~i~~g~~~~~p~~------~~~~~~~li~~c~~~dP~~RPt~~eil~~L~ 343 (353)
T 4ase_A 292 KIDE-----EFCRRLKEGTRMRAPDY------TTPEMYQTMLDCWHGEPSQRPTFSELVEHLG 343 (353)
T ss_dssp CCSH-----HHHHHHHHTCCCCCCTT------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CHHH-----HHHHHHHcCCCCCCCcc------CCHHHHHHHHHHcCcChhHCcCHHHHHHHHH
Confidence 3111 11111222222222222 2345788999999999999999999999874
No 37
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=7e-47 Score=406.50 Aligned_cols=251 Identities=21% Similarity=0.368 Sum_probs=195.2
Q ss_pred hcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccc-----
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHAL----- 773 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----- 773 (973)
..+|++.+.||+|+||+||+|+. .+|+.||||+++... .....+.+.+|+.++++++|||||++++++.+.+
T Consensus 4 l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~--~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~ 81 (299)
T 4g31_A 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKL 81 (299)
T ss_dssp HHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-----
T ss_pred chhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccc
Confidence 35699999999999999999965 489999999987543 2334678999999999999999999999986543
Q ss_pred -------eeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceE
Q 002069 774 -------HSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAH 846 (973)
Q Consensus 774 -------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~k 846 (973)
..|+||||+++|+|.++++......+..+..++.++.||+.||+|||++ +|+||||||+|||++.++.+|
T Consensus 82 ~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vK 158 (299)
T 4g31_A 82 QPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVK 158 (299)
T ss_dssp -----CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEE
T ss_pred cccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEE
Confidence 3689999999999999998776666677888999999999999999999 999999999999999999999
Q ss_pred EecccccccccCCCCc------------ccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhh
Q 002069 847 VSDFGISKFLKLGLSN------------RTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICS 914 (973)
Q Consensus 847 l~Dfg~a~~~~~~~~~------------~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~ 914 (973)
|+|||+|+........ ....+||+.|||||++.+..|+.++||||+||++|||++ ||....+..
T Consensus 159 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~- 234 (299)
T 4g31_A 159 VGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERV- 234 (299)
T ss_dssp ECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHH-
T ss_pred EccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHH-
Confidence 9999999877543221 233579999999999999999999999999999999996 775322111
Q ss_pred hhhhhhhhhhhhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 002069 915 SLSSNLNIALDEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQ 969 (973)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 969 (973)
...........+. ..........+++.+||+.||++|||++|+++
T Consensus 235 -------~~~~~~~~~~~p~---~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 235 -------RTLTDVRNLKFPP---LFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp -------HHHHHHHTTCCCH---HHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -------HHHHHHhcCCCCC---CCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1111222222222 12233445678999999999999999999987
No 38
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1.2e-45 Score=439.33 Aligned_cols=457 Identities=24% Similarity=0.218 Sum_probs=324.4
Q ss_pred cEEeCCCCCCCCCCCcccCCCCCCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCC
Q 002069 3 KVLGLSFNQFSGSIPPEIGHLTHLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNN 82 (973)
Q Consensus 3 ~~L~l~~~~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n 82 (973)
+++|+++|+++ .+|..+. ++|++|+|++|.+++..|..|..+++|++|+|++|++++..|++|+++++|++|+|++|
T Consensus 34 ~~l~ls~~~L~-~ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 110 (562)
T 3a79_B 34 SMVDYSNRNLT-HVPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHN 110 (562)
T ss_dssp CEEECTTSCCC-SCCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTS
T ss_pred cEEEcCCCCCc-cCCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCC
Confidence 57899999998 6888765 88999999999999877788999999999999999999777888999999999999999
Q ss_pred cCcccCCccccCccccceeeccCCcCCC-CCCCccccCCccceeecccccccccCcccccccCCC--CceecccCCC--C
Q 002069 83 LLSGSIPNEVGSLKSLSDLRLSNNSLNG-SIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFL--SDLQVSYNTL--S 157 (973)
Q Consensus 83 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L--~~L~l~~N~l--~ 157 (973)
+++ .+|.. .+++|++|+|++|++++ ..|..|+++++|++|++++|++++ ..+..+++| ++|++++|.+ +
T Consensus 111 ~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~L~~n~l~~~ 184 (562)
T 3a79_B 111 RLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQ---LDLLPVAHLHLSCILLDLVSYHIK 184 (562)
T ss_dssp CCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCT---TTTGGGTTSCEEEEEEEESSCCCC
T ss_pred cCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCcccc---CchhhhhhceeeEEEeeccccccc
Confidence 998 67766 78999999999999985 345789999999999999999874 345666666 9999999998 7
Q ss_pred CCCCccccCcc--ccceeeecccccCCCCCc-cccccCccceeeccccc-----cccccccccCCCCcccEEecCCcccC
Q 002069 158 GAIPFSLGNLT--NLVTLYIGINALSGSIPN-EIGNLKSLSDLRLDYNT-----LSGSILYSFGNLTKLEILYLDVNALS 229 (973)
Q Consensus 158 ~~~p~~l~~l~--~L~~L~l~~n~l~~~~p~-~~~~l~~L~~L~L~~N~-----l~~~~~~~~~~l~~L~~L~L~~n~i~ 229 (973)
+..|..+..+. .| .++++.|.+.+.++. .+..+++|+.|++++|+ +.+ ....|..+++|+.|+++++.+.
T Consensus 185 ~~~~~~l~~l~~~~l-~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~-~~~~l~~l~~L~~L~L~~~~l~ 262 (562)
T 3a79_B 185 GGETESLQIPNTTVL-HLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMT-FLSELTRGPTLLNVTLQHIETT 262 (562)
T ss_dssp SSSCCEEEECCEEEE-EEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHH-HHHHHHSCSSCEEEEEEEEEEC
T ss_pred ccCcccccccCcceE-EEEecCccchhhhhhhcccccceEEEecccccccccchHHH-HHHHHhccCcceEEEecCCcCc
Confidence 78888887765 33 557788888765554 45678899999999885 221 2345778888888888887765
Q ss_pred CCCCc---cccccccccceecccccccCCCCcccCCcchhhhccCCCcccCchhhhhhccccccceEEcccccccCCcCc
Q 002069 230 GLIPN---EIGNLKSLLALQLNYNTLSGSIPCSFGNLTKLVISCLGTNALSSSILEEIGNLKSLLHLQLNYNTLSGSIPL 306 (973)
Q Consensus 230 ~~~~~---~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 306 (973)
+.... .....++|++|++++|.+++.+|..+-.. ....++.|+.++++.|.+. ....
T Consensus 263 ~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~-------------------~~~~L~~L~~~~~~~~~~~-~p~~ 322 (562)
T 3a79_B 263 WKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTY-------------------SETALKSLMIEHVKNQVFL-FSKE 322 (562)
T ss_dssp HHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCC-------------------CSCSCCEEEEEEEEECCCS-SCHH
T ss_pred HHHHHHHHHhhhcccccEEEEeccEeeccccchhhhc-------------------ccccchheehhhcccceee-cChh
Confidence 42111 01123488899999999887666654100 0133444445555555541 1112
Q ss_pred hhhc---CCccceeeccccccCCCCCccccCCCCCCcEEcCCCCCCCcchhccCCCCCCcEEEccCCcccCCC--Ccccc
Q 002069 307 SLGS---LTNLATLYFSTNALSGSIPNEITNLRSLSDLQLSENTLNGSIPLALGNLTKLVSLDLSINKLSGSI--PLSFA 381 (973)
Q Consensus 307 ~~~~---l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~--~~~~~ 381 (973)
.+.. ..+|++|++++|.+.... ....+++|++|++++|.+++..|..++++++|++|+|++|++++.. |..|.
T Consensus 323 ~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~ 400 (562)
T 3a79_B 323 ALYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTK 400 (562)
T ss_dssp HHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTT
T ss_pred hhhhhhccCcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhc
Confidence 2222 245666666666664221 1245667777777777777666666777777777777777776532 34566
Q ss_pred cccccchhccccccccc-CCCcccCCCCCCCEEEccCCCCCCCcchhhhhhcccceEEEeeCcccccccCCCCCCCcccc
Q 002069 382 SLTSLTTLYLYENSLCD-SIPKEIGDMKSLSILDLSSNKLNGSIPLSLANLTNSLKVLYLSSNHIVGEIPLGHGKFSSLI 460 (973)
Q Consensus 382 ~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~ 460 (973)
++++|++|++++|++++ ..+..+..+++|++|++++|++++.+|..+. ++|++|+|++|+++ .+|..+..+++|+
T Consensus 401 ~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~---~~L~~L~L~~N~l~-~ip~~~~~l~~L~ 476 (562)
T 3a79_B 401 NMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP---PKVKVLDLHNNRIM-SIPKDVTHLQALQ 476 (562)
T ss_dssp TCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC---TTCSEEECCSSCCC-CCCTTTTSSCCCS
T ss_pred CCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc---CcCCEEECCCCcCc-ccChhhcCCCCCC
Confidence 77777777777777766 3334566777777777777777755554433 46778888888777 4555555778888
Q ss_pred eeeccCCccCCCCCcccccccccccccccccccccc
Q 002069 461 QLILNNNELSGQLSPELGSLNQLEYLDLSANTFHNS 496 (973)
Q Consensus 461 ~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~i~~~ 496 (973)
+|++++|++++..+..+..+++|+.|++++|++.+.
T Consensus 477 ~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~ 512 (562)
T 3a79_B 477 ELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT 512 (562)
T ss_dssp EEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCCC
T ss_pred EEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCCC
Confidence 888888888854444478888888888888888754
No 39
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=2.3e-45 Score=436.73 Aligned_cols=456 Identities=20% Similarity=0.224 Sum_probs=276.7
Q ss_pred CCCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCcccCCccccCccccceeec
Q 002069 24 THLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSLSDLRL 103 (973)
Q Consensus 24 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L 103 (973)
...+++|+++|++++ +|..+. ++|++|+|++|++++..|.+|+++++|++|+|++|++++..|+.|+.+++|++|+|
T Consensus 31 ~~~~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 107 (562)
T 3a79_B 31 ELESMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDV 107 (562)
T ss_dssp --CCEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEEC
Confidence 345889999999984 777665 78999999999998766678999999999999999998777888999999999999
Q ss_pred cCCcCCCCCCCccccCCccceeecccccccc-cCcccccccCCCCceecccCCCCCCCCccccCcccc--ceeeeccccc
Q 002069 104 SNNSLNGSIPSSLGNLTNLVTLYLHMNALSG-SIPDEIGNLKFLSDLQVSYNTLSGAIPFSLGNLTNL--VTLYIGINAL 180 (973)
Q Consensus 104 ~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L--~~L~l~~n~l 180 (973)
++|+++ .+|.. .+++|++|+|++|++++ ..|+.|+++++|++|++++|++++. .+..+++| +.|++++|.+
T Consensus 108 s~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l 181 (562)
T 3a79_B 108 SHNRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSY 181 (562)
T ss_dssp TTSCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSC
T ss_pred CCCcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccc
Confidence 999998 67776 78999999999999885 2457888999999999999988753 45555555 8888888888
Q ss_pred --CCCCCccccccC--ccceeeccccccccc-cccccCCCCcccEEecCCccc-----CCCCCccccccccccceecccc
Q 002069 181 --SGSIPNEIGNLK--SLSDLRLDYNTLSGS-ILYSFGNLTKLEILYLDVNAL-----SGLIPNEIGNLKSLLALQLNYN 250 (973)
Q Consensus 181 --~~~~p~~~~~l~--~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~n~i-----~~~~~~~~~~l~~L~~L~L~~N 250 (973)
++..|..+..+. .+ .++++.|.+.+. ....+..+++|+.|++++|+. .+. ...+.++++|+.|+++++
T Consensus 182 ~~~~~~~~~l~~l~~~~l-~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~-~~~l~~l~~L~~L~L~~~ 259 (562)
T 3a79_B 182 HIKGGETESLQIPNTTVL-HLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTF-LSELTRGPTLLNVTLQHI 259 (562)
T ss_dssp CCCSSSCCEEEECCEEEE-EEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHH-HHHHHSCSSCEEEEEEEE
T ss_pred cccccCcccccccCcceE-EEEecCccchhhhhhhcccccceEEEecccccccccchHHHH-HHHHhccCcceEEEecCC
Confidence 777777777654 33 446666666542 333455666666666666631 111 123444555555555555
Q ss_pred cccCCCCcccCCcchhhhccCCCcccCchhhhhhccccccceEEcccccccCCcCchh-----hcCCccceeeccccccC
Q 002069 251 TLSGSIPCSFGNLTKLVISCLGTNALSSSILEEIGNLKSLLHLQLNYNTLSGSIPLSL-----GSLTNLATLYFSTNALS 325 (973)
Q Consensus 251 ~l~~~~~~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~-----~~l~~L~~L~L~~n~l~ 325 (973)
.+++ +.+.... .. ...++|++|++++|.+++.+|..+ ..++.|+.++++.|.+
T Consensus 260 ~l~~-------------------~~~~~~~-~~-~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~- 317 (562)
T 3a79_B 260 ETTW-------------------KCSVKLF-QF-FWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF- 317 (562)
T ss_dssp EECH-------------------HHHHHHH-HH-HTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC-
T ss_pred cCcH-------------------HHHHHHH-Hh-hhcccccEEEEeccEeeccccchhhhcccccchheehhhccccee-
Confidence 4431 1111111 11 122366666666666665555555 5555555555555555
Q ss_pred CCCC-ccccCC---CCCCcEEcCCCCCCCcchhccCCCCCCcEEEccCCcccCCCCcccccccccchhcccccccccC--
Q 002069 326 GSIP-NEITNL---RSLSDLQLSENTLNGSIPLALGNLTKLVSLDLSINKLSGSIPLSFASLTSLTTLYLYENSLCDS-- 399 (973)
Q Consensus 326 ~~~~-~~~~~l---~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~-- 399 (973)
.+| ..+..+ .+|++|++++|.+.... ....+++|++|++++|++++..|..|.++++|+.|++++|++++.
T Consensus 318 -~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 394 (562)
T 3a79_B 318 -LFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFK 394 (562)
T ss_dssp -SSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTH
T ss_pred -ecChhhhhhhhccCcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCccc
Confidence 222 222211 44666666666554221 124555666666666666655555555566666666666655542
Q ss_pred CCcccCCCCCCCEEEccCCCCCCCcchhhhhhcccceEEEeeCcccccccCCCCCCCcccceeeccCCccCCCCCccccc
Q 002069 400 IPKEIGDMKSLSILDLSSNKLNGSIPLSLANLTNSLKVLYLSSNHIVGEIPLGHGKFSSLIQLILNNNELSGQLSPELGS 479 (973)
Q Consensus 400 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~l~~ 479 (973)
.|..|..+++|++|++++|++++.+|...+...++|++|++++|++++..+..+.
T Consensus 395 ~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~------------------------- 449 (562)
T 3a79_B 395 VALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP------------------------- 449 (562)
T ss_dssp HHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC-------------------------
T ss_pred chhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc-------------------------
Confidence 2344555555666666666555434443322223455555555555443333222
Q ss_pred ccccccccccccccccccCccccccccccEEeecCccCCCCCCcccccccccCeecccccccC
Q 002069 480 LNQLEYLDLSANTFHNSIPESLGNLVKLHYLNLSNNQFSQKIPNPIEKLIHLSELDLSYKIFG 542 (973)
Q Consensus 480 l~~L~~L~Ls~N~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~i~ 542 (973)
++|++|+|++|+|+ .+|..+..+++|++|+|++|+++...+..+..+++|+.|++++|.+.
T Consensus 450 -~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~ 510 (562)
T 3a79_B 450 -PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWD 510 (562)
T ss_dssp -TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBC
T ss_pred -CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcC
Confidence 34555555555554 34444445555555555555555433333555555555555555554
No 40
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.5e-44 Score=398.26 Aligned_cols=262 Identities=24% Similarity=0.315 Sum_probs=201.8
Q ss_pred cCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeec------cc
Q 002069 701 KNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSH------AL 773 (973)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------~~ 773 (973)
++|++.+.||+|+||+||+|.. .+|+.||||++...... ....+.+.+|+.++++++|||||++++++.. .+
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDV-VTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSS-HHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccc-hHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 5799999999999999999965 58999999999765433 2345778899999999999999999998753 35
Q ss_pred eeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEeccccc
Q 002069 774 HSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGIS 853 (973)
Q Consensus 774 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a 853 (973)
..|+|||||+ |+|.+++... ..+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+|++|||+|
T Consensus 133 ~~~ivmE~~~-g~L~~~i~~~---~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla 205 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIHSS---QPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMA 205 (398)
T ss_dssp CEEEEEECCS-EEHHHHHTSS---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEEeCCC-CCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeeccee
Confidence 7899999996 6799999754 3689999999999999999999999 9999999999999999999999999999
Q ss_pred ccccCC----CCcccccccccCcccccccccC-CCCCccchHHHHHHHHHHHhCCCCCcchhhhhh------hhhhhhhh
Q 002069 854 KFLKLG----LSNRTELAGTFGYIAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISSICS------SLSSNLNI 922 (973)
Q Consensus 854 ~~~~~~----~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~------~~~~~~~~ 922 (973)
+.+... .......+||+.|||||++.+. .++.++||||+||++|||++|++||........ ..+.....
T Consensus 206 ~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~ 285 (398)
T 4b99_A 206 RGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPA 285 (398)
T ss_dssp BCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGG
T ss_pred eecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChH
Confidence 876432 1234457899999999998875 468999999999999999999999975432110 00000000
Q ss_pred -----------hhhhhcCCCCCCCchh-hHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 923 -----------ALDEMLDPRLPTPLRN-VQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 923 -----------~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
.....+.+..+..+.. .......+.+++.+||+.||.+|||++|++++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 286 VIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp GTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred HhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 0000111111111110 01123457789999999999999999999863
No 41
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.6e-42 Score=401.90 Aligned_cols=388 Identities=21% Similarity=0.195 Sum_probs=274.9
Q ss_pred EEeCCCCCCCCCCCcccCCCCCCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCC-CCcccCCCCCcEEEccCC
Q 002069 4 VLGLSFNQFSGSIPPEIGHLTHLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSI-PPSLGNLTSLIYIDIGNN 82 (973)
Q Consensus 4 ~L~l~~~~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~-p~~~~~l~~L~~L~l~~n 82 (973)
.++.++++++ .+|. + .++|++|+|++|.+++..|..|+++++|++|+|++|.+.+.+ |..|+++++|++|+|++|
T Consensus 14 ~~~c~~~~l~-~lp~-l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n 89 (455)
T 3v47_A 14 NAICINRGLH-QVPE-L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYN 89 (455)
T ss_dssp EEECCSSCCS-SCCC-C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTC
T ss_pred ccCcCCCCcc-cCCC-C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCC
Confidence 4666777776 6776 2 267777777777777766777777777777777777776444 456777777777777777
Q ss_pred cCcccCCccccCccccceeeccCCcCCCCCCCc--cccCCccceeecccccccccCccc-ccccCCCCceecccCCCCCC
Q 002069 83 LLSGSIPNEVGSLKSLSDLRLSNNSLNGSIPSS--LGNLTNLVTLYLHMNALSGSIPDE-IGNLKFLSDLQVSYNTLSGA 159 (973)
Q Consensus 83 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~--~~~l~~L~~L~L~~n~l~~~~p~~-~~~l~~L~~L~l~~N~l~~~ 159 (973)
++++..|..|+++++|++|+|++|++++..|.. +.++++|++|+|++|++++..|.. |+++++|++|++++|++++.
T Consensus 90 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~ 169 (455)
T 3v47_A 90 QFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSI 169 (455)
T ss_dssp TTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCC
T ss_pred ccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCccccc
Confidence 777666777777777777777777776544433 777777777777777777655655 67777777777777777766
Q ss_pred CCccccCc--cccceeeecccccCCCCCccccccCccceeeccccccccccccccCCCCcccEEecCCcccCCCCCcccc
Q 002069 160 IPFSLGNL--TNLVTLYIGINALSGSIPNEIGNLKSLSDLRLDYNTLSGSILYSFGNLTKLEILYLDVNALSGLIPNEIG 237 (973)
Q Consensus 160 ~p~~l~~l--~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~ 237 (973)
.|..+..+ .+|+.|++++|.+.+..+..++. .....+..+++|++|++++|++++..|..+.
T Consensus 170 ~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~----------------~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~ 233 (455)
T 3v47_A 170 CEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGW----------------EKCGNPFKNTSITTLDLSGNGFKESMAKRFF 233 (455)
T ss_dssp CTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTH----------------HHHCCTTTTCEEEEEECTTSCCCHHHHHHHH
T ss_pred ChhhhhccccccccccccccCcccccchhhccc----------------cccccccccceeeeEecCCCcccccchhhhh
Confidence 66666655 56666666666666433322210 0001122344555555555555444444443
Q ss_pred cc---ccccceecccccccCCCCcccCCcchhhhccCCCcccCchhhhhhcc--ccccceEEcccccccCCcCchhhcCC
Q 002069 238 NL---KSLLALQLNYNTLSGSIPCSFGNLTKLVISCLGTNALSSSILEEIGN--LKSLLHLQLNYNTLSGSIPLSLGSLT 312 (973)
Q Consensus 238 ~l---~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~n~i~~~~~~~~~~--l~~L~~L~l~~n~l~~~~~~~~~~l~ 312 (973)
.. ++|+.|++++|.+.+... ..+.+.......+.. .++|++|++++|.+++..|..++.++
T Consensus 234 ~~~~~~~L~~L~l~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~ 299 (455)
T 3v47_A 234 DAIAGTKIQSLILSNSYNMGSSF--------------GHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFT 299 (455)
T ss_dssp HHTTTCCEEEEECTTCTTTSCCT--------------TCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCT
T ss_pred ccccccceeeEeecccccccccc--------------chhhhccCcccccccccccCceEEEecCccccccchhhcccCC
Confidence 33 455555555555432111 011111111222222 36899999999999988888999999
Q ss_pred ccceeeccccccCCCCCccccCCCCCCcEEcCCCCCCCcchhccCCCCCCcEEEccCCcccCCCCcccccccccchhccc
Q 002069 313 NLATLYFSTNALSGSIPNEITNLRSLSDLQLSENTLNGSIPLALGNLTKLVSLDLSINKLSGSIPLSFASLTSLTTLYLY 392 (973)
Q Consensus 313 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~ 392 (973)
+|++|++++|.+++..|..|.++++|++|+|++|.+++..+..|.++++|++|+|++|++++..|..|.++++|++|+|+
T Consensus 300 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 379 (455)
T 3v47_A 300 DLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALD 379 (455)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECC
Confidence 99999999999998888899999999999999999988888889999999999999999998888899999999999999
Q ss_pred ccccccCCCcccCCCCCCCEEEccCCCCCCCcc
Q 002069 393 ENSLCDSIPKEIGDMKSLSILDLSSNKLNGSIP 425 (973)
Q Consensus 393 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 425 (973)
+|++++..+..|..+++|++|++++|++++..|
T Consensus 380 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 380 TNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp SSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 999988777788899999999999999987776
No 42
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=2.7e-43 Score=389.25 Aligned_cols=197 Identities=26% Similarity=0.306 Sum_probs=170.0
Q ss_pred HHHhcCCcccccccCCCceeEEEEEc----CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcC-CCCceeeeceeeec
Q 002069 697 IRATKNFDDEHCIGNGGQGSVYKAEL----PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKI-RHRNIVKFYGFCSH 771 (973)
Q Consensus 697 ~~~~~~~~~~~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~ 771 (973)
....++|++.+.||+|+||+||+|+. .+++.||||++.... ...++.+|+++++.+ +|||||++++++.+
T Consensus 17 p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-----~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~ 91 (361)
T 4f9c_A 17 PQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-----HPIRIAAELQCLTVAGGQDNVMGVKYCFRK 91 (361)
T ss_dssp GGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-----CHHHHHHHHHHHHHTCSBTTBCCCSEEEEE
T ss_pred CCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-----CHHHHHHHHHHHHHhcCCCCCceEEEEEEE
Confidence 34567899999999999999999954 256889999986532 135678999999988 69999999999999
Q ss_pred cceeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCC-CceEEecc
Q 002069 772 ALHSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLE-YEAHVSDF 850 (973)
Q Consensus 772 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~-~~~kl~Df 850 (973)
.++.|+||||+++|+|.++++ .+++.++..++.|++.||+|||++ ||+||||||+|||++.+ +.+||+||
T Consensus 92 ~~~~~lvmE~~~g~~L~~~~~------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DF 162 (361)
T 4f9c_A 92 NDHVVIAMPYLEHESFLDILN------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDF 162 (361)
T ss_dssp TTEEEEEEECCCCCCHHHHHT------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCC
T ss_pred CCEEEEEEeCCCcccHHHHHc------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcC
Confidence 999999999999999999984 478999999999999999999999 99999999999999877 89999999
Q ss_pred cccccccCCCC----------------------------cccccccccCcccccccccC-CCCCccchHHHHHHHHHHHh
Q 002069 851 GISKFLKLGLS----------------------------NRTELAGTFGYIAPELAYTM-KVTEKCDVYSFGVLALEVIK 901 (973)
Q Consensus 851 g~a~~~~~~~~----------------------------~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~t 901 (973)
|+|+....... .....+||+.|||||++.+. .++.++||||+||++|||+|
T Consensus 163 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~ 242 (361)
T 4f9c_A 163 GLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLS 242 (361)
T ss_dssp TTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHH
T ss_pred CCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHH
Confidence 99986543211 12335799999999999875 48999999999999999999
Q ss_pred CCCCCc
Q 002069 902 GKHPRD 907 (973)
Q Consensus 902 g~~p~~ 907 (973)
|+.||.
T Consensus 243 G~~Pf~ 248 (361)
T 4f9c_A 243 GRYPFY 248 (361)
T ss_dssp TCSSSS
T ss_pred CCCCCC
Confidence 999995
No 43
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=6.1e-42 Score=397.05 Aligned_cols=362 Identities=22% Similarity=0.213 Sum_probs=272.1
Q ss_pred CcEEeCCCCCCCCCCCcccCCCCCCCEEECCCCcccccC-CcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEcc
Q 002069 2 LKVLGLSFNQFSGSIPPEIGHLTHLKLLSFSKNQLSGLI-PHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIG 80 (973)
Q Consensus 2 l~~L~l~~~~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~-p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~ 80 (973)
|++|||++|++++..|..++++++|++|+|++|.+.+.+ |..|..+++|++|+|++|++++..|..|+++++|++|+|+
T Consensus 32 l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 111 (455)
T 3v47_A 32 VNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLT 111 (455)
T ss_dssp CCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECT
T ss_pred cCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEeCC
Confidence 789999999999777889999999999999999997544 6679999999999999999997789999999999999999
Q ss_pred CCcCcccCCcc--ccCccccceeeccCCcCCCCCCCc-cccCCccceeecccccccccCccccccc--CCCCceecccCC
Q 002069 81 NNLLSGSIPNE--VGSLKSLSDLRLSNNSLNGSIPSS-LGNLTNLVTLYLHMNALSGSIPDEIGNL--KFLSDLQVSYNT 155 (973)
Q Consensus 81 ~n~l~~~~p~~--~~~l~~L~~L~L~~n~l~~~~p~~-~~~l~~L~~L~L~~n~l~~~~p~~~~~l--~~L~~L~l~~N~ 155 (973)
+|++++..|.. ++.+++|++|+|++|++++..|.. +.++++|++|++++|++++..|..+..+ .+|+.|++++|.
T Consensus 112 ~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~ 191 (455)
T 3v47_A 112 QCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSIT 191 (455)
T ss_dssp TSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCB
T ss_pred CCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCc
Confidence 99998756655 999999999999999999777876 8999999999999999998889999887 799999999999
Q ss_pred CCCCCCccc--------cCccccceeeecccccCCCCCcccccc---CccceeeccccccccccccccCCCCcccEEecC
Q 002069 156 LSGAIPFSL--------GNLTNLVTLYIGINALSGSIPNEIGNL---KSLSDLRLDYNTLSGSILYSFGNLTKLEILYLD 224 (973)
Q Consensus 156 l~~~~p~~l--------~~l~~L~~L~l~~n~l~~~~p~~~~~l---~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 224 (973)
+.+..+..+ ..+++|++|++++|++++..|..+..+ ++|+.|++++|.+.+.. +.
T Consensus 192 l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~--------------~~ 257 (455)
T 3v47_A 192 LQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSS--------------FG 257 (455)
T ss_dssp CTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCC--------------TT
T ss_pred ccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccc--------------cc
Confidence 986655443 356788888888888887777766654 77888888877665321 11
Q ss_pred CcccCCCCCcccccc--ccccceecccccccCCCCcccCCcchhhhccCCCcccCchhhhhhccccccceEEcccccccC
Q 002069 225 VNALSGLIPNEIGNL--KSLLALQLNYNTLSGSIPCSFGNLTKLVISCLGTNALSSSILEEIGNLKSLLHLQLNYNTLSG 302 (973)
Q Consensus 225 ~n~i~~~~~~~~~~l--~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~ 302 (973)
.+.+....+..+.++ ++|+.|++++|.+++..|..|+.+++|+.|++++|.+....+..|.++++|++|++++|.+++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 337 (455)
T 3v47_A 258 HTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGS 337 (455)
T ss_dssp CCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCE
T ss_pred hhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCC
Confidence 222222223333333 466667777766666656555555555555555555555555556666666666666666666
Q ss_pred CcCchhhcCCccceeeccccccCCCCCccccCCCCCCcEEcCCCCCCCcchhccCCCCCCcEEEccCCcccCCCC
Q 002069 303 SIPLSLGSLTNLATLYFSTNALSGSIPNEITNLRSLSDLQLSENTLNGSIPLALGNLTKLVSLDLSINKLSGSIP 377 (973)
Q Consensus 303 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~ 377 (973)
..+..|..+++|++|++++|.+++..|..|..+++|++|+|++|++++..+..+..+++|++|++++|++++..|
T Consensus 338 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 338 IDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp ECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred cChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 556666666666666666666666556666666666666666666666555566666666666666666664433
No 44
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1.3e-42 Score=407.62 Aligned_cols=253 Identities=20% Similarity=0.268 Sum_probs=209.4
Q ss_pred hcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVV 778 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 778 (973)
.++|++.+.||+|+||+||+|.. .+|+.||+|++.... ....+.+.+|+.+|+.++|||||++++++.++...|+|
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~---~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv 232 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH---ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMI 232 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc---hhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEE
Confidence 36899999999999999999955 589999999987542 23357789999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCC--CceEEecccccccc
Q 002069 779 YEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLE--YEAHVSDFGISKFL 856 (973)
Q Consensus 779 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~--~~~kl~Dfg~a~~~ 856 (973)
||||+||+|.+++.... ..+++.++..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+.+
T Consensus 233 ~E~~~gg~L~~~i~~~~--~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~ 307 (573)
T 3uto_A 233 YEFMSGGELFEKVADEH--NKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL 307 (573)
T ss_dssp EECCCCCBHHHHHTCTT--SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEEC
T ss_pred EeecCCCcHHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEc
Confidence 99999999999986433 3588999999999999999999999 99999999999999855 89999999999987
Q ss_pred cCCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCCc
Q 002069 857 KLGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLPTPL 936 (973)
Q Consensus 857 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (973)
... .......||+.|||||++.+..|+.++||||+||++|||++|+.||...... .....+.........
T Consensus 308 ~~~-~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~---------~~~~~i~~~~~~~~~ 377 (573)
T 3uto_A 308 DPK-QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD---------ETLRNVKSCDWNMDD 377 (573)
T ss_dssp CTT-SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH---------HHHHHHHTTCCCCCS
T ss_pred cCC-CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH---------HHHHHHHhCCCCCCc
Confidence 654 3344568999999999999999999999999999999999999999754321 111222222221111
Q ss_pred hhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 937 RNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 937 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
......+..+.++|.+||+.||.+|||++|++++
T Consensus 378 ~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 378 SAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp GGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1122234457789999999999999999999873
No 45
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1.3e-42 Score=402.36 Aligned_cols=250 Identities=20% Similarity=0.205 Sum_probs=199.0
Q ss_pred hcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHH---HHHHHHhhcCCCCceeeeceeeecccee
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEF---LNEGNALTKIRHRNIVKFYGFCSHALHS 775 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~---~~e~~~l~~l~h~niv~~~~~~~~~~~~ 775 (973)
.++|++.+.||+|+||+||+|+. .+|+.||||++.............+ ..++.+++.++|||||++++++.+++..
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 36799999999999999999965 4899999999864221111112223 3446677888999999999999999999
Q ss_pred EEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEeccccccc
Q 002069 776 FVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKF 855 (973)
Q Consensus 776 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~ 855 (973)
|+||||++||+|.+++.+. ..+++..+..++.||+.||+|||++ +||||||||+|||++.+|++||+|||+|+.
T Consensus 268 ylVmEy~~GGdL~~~l~~~---~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~ 341 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQH---GVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACD 341 (689)
T ss_dssp EEEECCCCSCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeee
Confidence 9999999999999999754 3689999999999999999999999 999999999999999999999999999987
Q ss_pred ccCCCCcccccccccCccccccccc-CCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhc--CCCC
Q 002069 856 LKLGLSNRTELAGTFGYIAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEML--DPRL 932 (973)
Q Consensus 856 ~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 932 (973)
+... .....+||+.|||||++.+ ..|+.++||||+||++|||++|+.||....... ......... ...+
T Consensus 342 ~~~~--~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~------~~~i~~~i~~~~~~~ 413 (689)
T 3v5w_A 342 FSKK--KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD------KHEIDRMTLTMAVEL 413 (689)
T ss_dssp CSSC--CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC------HHHHHHHHHHCCCCC
T ss_pred cCCC--CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH------HHHHHHhhcCCCCCC
Confidence 7543 3345789999999999964 579999999999999999999999997432110 011111111 1122
Q ss_pred CCCchhhHHHHHHHHHHHhcccCCCCCCCCC-----HHHHHH
Q 002069 933 PTPLRNVQDKLISIMEVSISCLDESPTSRPT-----MQKVSQ 969 (973)
Q Consensus 933 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~ev~~ 969 (973)
+.. .+..+.++|.+||+.||.+|++ ++||.+
T Consensus 414 p~~------~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 414 PDS------FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp CTT------SCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred Ccc------CCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 222 2334678999999999999998 677765
No 46
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=2.5e-41 Score=388.07 Aligned_cols=410 Identities=26% Similarity=0.288 Sum_probs=194.3
Q ss_pred CCCCCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCC-------------cEEEccCCcCcccC
Q 002069 22 HLTHLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSL-------------IYIDIGNNLLSGSI 88 (973)
Q Consensus 22 ~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L-------------~~L~l~~n~l~~~~ 88 (973)
+.++|++|++++|.+ +.+|++|+++++|++|++++|++.+.+|.+++++++| ++|++++|.++ .+
T Consensus 9 ~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~-~l 86 (454)
T 1jl5_A 9 SNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLS-SL 86 (454)
T ss_dssp --------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCS-CC
T ss_pred ccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccc-cC
Confidence 445566666666666 4556666666666666666666655666666665554 66677776666 34
Q ss_pred CccccCccccceeeccCCcCCCCCCCccccCCccceeecccccccccCcccccccCCCCceecccCCCCCCCCccccCcc
Q 002069 89 PNEVGSLKSLSDLRLSNNSLNGSIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSGAIPFSLGNLT 168 (973)
Q Consensus 89 p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~ 168 (973)
|.. .++|++|++++|++++ +|..+ ++|++|++++|++++ +|.. .++|++|++++|++++ +| +|++++
T Consensus 87 p~~---~~~L~~L~l~~n~l~~-lp~~~---~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~ 153 (454)
T 1jl5_A 87 PEL---PPHLESLVASCNSLTE-LPELP---QSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSS 153 (454)
T ss_dssp CSC---CTTCSEEECCSSCCSS-CCCCC---TTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCT
T ss_pred CCC---cCCCCEEEccCCcCCc-ccccc---CCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCC
Confidence 442 2466667777776664 55432 566666666666653 3321 1566666666666664 44 466666
Q ss_pred ccceeeecccccCCCCCccccccCccceeeccccccccccccccCCCCcccEEecCCcccCCCCCccccccccccceecc
Q 002069 169 NLVTLYIGINALSGSIPNEIGNLKSLSDLRLDYNTLSGSILYSFGNLTKLEILYLDVNALSGLIPNEIGNLKSLLALQLN 248 (973)
Q Consensus 169 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~ 248 (973)
+|++|++++|++++ +|..+ ++|++|++++|++++++ .|+++++|+.|++++|+++++ |... ++|++|+++
T Consensus 154 ~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~l~--~~~~l~~L~~L~l~~N~l~~l-~~~~---~~L~~L~l~ 223 (454)
T 1jl5_A 154 FLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEELP--ELQNLPFLTAIYADNNSLKKL-PDLP---LSLESIVAG 223 (454)
T ss_dssp TCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSSCC--CCTTCTTCCEEECCSSCCSSC-CCCC---TTCCEEECC
T ss_pred CCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCcCc--cccCCCCCCEEECCCCcCCcC-CCCc---CcccEEECc
Confidence 66666666666663 44432 36666666666666543 466666666666666666653 2221 356666666
Q ss_pred cccccCCCCcccCCcchhhhccCCCcccCchhhhhhccccccceEEcccccccCCcCchhhcCCccceeeccccccCCCC
Q 002069 249 YNTLSGSIPCSFGNLTKLVISCLGTNALSSSILEEIGNLKSLLHLQLNYNTLSGSIPLSLGSLTNLATLYFSTNALSGSI 328 (973)
Q Consensus 249 ~N~l~~~~~~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 328 (973)
+|.++. +| . ++.+++|++|++++|++++ +|.. +++|++|++++|.+++ +
T Consensus 224 ~n~l~~-lp-~------------------------~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l 272 (454)
T 1jl5_A 224 NNILEE-LP-E------------------------LQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-L 272 (454)
T ss_dssp SSCCSS-CC-C------------------------CTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-C
T ss_pred CCcCCc-cc-c------------------------cCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-c
Confidence 666652 22 1 3344555556666665553 2221 2556666666666664 3
Q ss_pred CccccCCCCCCcEEcCCCCCCCcchhccCCCCCCcEEEccCCcccCCCCcccccc-cccchhcccccccccCCCcccCCC
Q 002069 329 PNEITNLRSLSDLQLSENTLNGSIPLALGNLTKLVSLDLSINKLSGSIPLSFASL-TSLTTLYLYENSLCDSIPKEIGDM 407 (973)
Q Consensus 329 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~l 407 (973)
|.. .++|++|++++|.+++. +.. .++|++|++++|++++. + .+ ++|+.|++++|++++ +|.. +
T Consensus 273 ~~~---~~~L~~L~ls~N~l~~l-~~~---~~~L~~L~l~~N~l~~i-~----~~~~~L~~L~Ls~N~l~~-lp~~---~ 336 (454)
T 1jl5_A 273 PEL---PQSLTFLDVSENIFSGL-SEL---PPNLYYLNASSNEIRSL-C----DLPPSLEELNVSNNKLIE-LPAL---P 336 (454)
T ss_dssp CCC---CTTCCEEECCSSCCSEE-SCC---CTTCCEEECCSSCCSEE-C----CCCTTCCEEECCSSCCSC-CCCC---C
T ss_pred Ccc---cCcCCEEECcCCccCcc-cCc---CCcCCEEECcCCcCCcc-c----CCcCcCCEEECCCCcccc-cccc---C
Confidence 332 25666666666666642 111 15667777777766642 1 22 367777777777765 3432 4
Q ss_pred CCCCEEEccCCCCCCCcchhhhhhcccceEEEeeCccccc--ccCCCCCCCcccceeeccCCccCCCCCccccccccccc
Q 002069 408 KSLSILDLSSNKLNGSIPLSLANLTNSLKVLYLSSNHIVG--EIPLGHGKFSSLIQLILNNNELSGQLSPELGSLNQLEY 485 (973)
Q Consensus 408 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~L~~n~l~~--~~~~~~~~~~~L~~L~l~~N~l~~~~~~~l~~l~~L~~ 485 (973)
++|++|++++|+++ .+|. ..++|++|++++|++++ .+|..+. . ++.|.+.+..|.. +++|++
T Consensus 337 ~~L~~L~L~~N~l~-~lp~----~l~~L~~L~L~~N~l~~l~~ip~~l~------~--L~~n~~~~~i~~~---~~~L~~ 400 (454)
T 1jl5_A 337 PRLERLIASFNHLA-EVPE----LPQNLKQLHVEYNPLREFPDIPESVE------D--LRMNSHLAEVPEL---PQNLKQ 400 (454)
T ss_dssp TTCCEEECCSSCCS-CCCC----CCTTCCEEECCSSCCSSCCCCCTTCC------E--EECCC-----------------
T ss_pred CcCCEEECCCCccc-cccc----hhhhccEEECCCCCCCcCCCChHHHH------h--hhhcccccccccc---cCcCCE
Confidence 67777777777776 4554 23467777777777776 4444333 2 2345555555542 467888
Q ss_pred cccccccccc--ccCccccccccccEEeecCccCCCCCCccc
Q 002069 486 LDLSANTFHN--SIPESLGNLVKLHYLNLSNNQFSQKIPNPI 525 (973)
Q Consensus 486 L~Ls~N~i~~--~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~ 525 (973)
||+++|.+++ .+| ..|+.|.+++|.+.+..+...
T Consensus 401 L~ls~N~l~~~~~iP------~sl~~L~~~~~~~~~~~~~~~ 436 (454)
T 1jl5_A 401 LHVETNPLREFPDIP------ESVEDLRMNSERVVDPYEFAH 436 (454)
T ss_dssp ------------------------------------------
T ss_pred EECCCCcCCccccch------hhHhheeCcCcccCCccccCH
Confidence 8888888875 344 346667778888776554433
No 47
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=3.7e-41 Score=386.65 Aligned_cols=406 Identities=26% Similarity=0.272 Sum_probs=260.8
Q ss_pred CCcEEeCCCCCCCCCCCcccCCCCCCCEEECCCCcccccCCcCccCCCCC-------------CeeeccCCcCCCCCCCc
Q 002069 1 MLKVLGLSFNQFSGSIPPEIGHLTHLKLLSFSKNQLSGLIPHEIGRLSSL-------------NGLSLYSNFLKGSIPPS 67 (973)
Q Consensus 1 ~l~~L~l~~~~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L-------------~~L~l~~n~~~~~~p~~ 67 (973)
.|++|++++|++ |.+|++++++++|++|++++|++++.+|..++.+.+| ++|++++|+++ .+|..
T Consensus 12 ~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~-~lp~~ 89 (454)
T 1jl5_A 12 FLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLS-SLPEL 89 (454)
T ss_dssp -----------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCS-CCCSC
T ss_pred cchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccc-cCCCC
Confidence 478999999999 6999999999999999999999999999999999875 99999999999 56762
Q ss_pred ccCCCCCcEEEccCCcCcccCCccccCccccceeeccCCcCCCCCCCccccCCccceeecccccccccCcccccccCCCC
Q 002069 68 LGNLTSLIYIDIGNNLLSGSIPNEVGSLKSLSDLRLSNNSLNGSIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLS 147 (973)
Q Consensus 68 ~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 147 (973)
.++|++|++++|++++ +|.. +++|++|++++|++++ +|... ++|++|++++|++++ +| .|+++++|+
T Consensus 90 ---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~~---~~L~~L~L~~n~l~~-lp-~~~~l~~L~ 156 (454)
T 1jl5_A 90 ---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDLP---PLLEYLGVSNNQLEK-LP-ELQNSSFLK 156 (454)
T ss_dssp ---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSCC---TTCCEEECCSSCCSS-CC-CCTTCTTCC
T ss_pred ---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCCC---CCCCEEECcCCCCCC-Cc-ccCCCCCCC
Confidence 4789999999999995 7764 4789999999999984 55432 799999999999995 77 699999999
Q ss_pred ceecccCCCCCCCCccccCccccceeeecccccCCCCCccccccCccceeeccccccccccccccCCCCcccEEecCCcc
Q 002069 148 DLQVSYNTLSGAIPFSLGNLTNLVTLYIGINALSGSIPNEIGNLKSLSDLRLDYNTLSGSILYSFGNLTKLEILYLDVNA 227 (973)
Q Consensus 148 ~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~ 227 (973)
+|++++|++++ +|..+ .+|++|++++|++++ +| .++++++|++|++++|++++++.. .++|++|++++|.
T Consensus 157 ~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~l~~~----~~~L~~L~l~~n~ 226 (454)
T 1jl5_A 157 IIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKKLPDL----PLSLESIVAGNNI 226 (454)
T ss_dssp EEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSSCCCC----CTTCCEEECCSSC
T ss_pred EEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCcCCCC----cCcccEEECcCCc
Confidence 99999999995 56543 599999999999995 67 699999999999999999975432 3699999999999
Q ss_pred cCCCCCccccccccccceecccccccCCCCcccCCcchhhhccCCCcccCchhhhhhccccccceEEcccccccCCcCch
Q 002069 228 LSGLIPNEIGNLKSLLALQLNYNTLSGSIPCSFGNLTKLVISCLGTNALSSSILEEIGNLKSLLHLQLNYNTLSGSIPLS 307 (973)
Q Consensus 228 i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 307 (973)
++.+ | .+..+++|++|++++|++++. |.. .++|+.|++++|.+..++. .+++|++|++++|++++. +..
T Consensus 227 l~~l-p-~~~~l~~L~~L~l~~N~l~~l-~~~---~~~L~~L~l~~N~l~~l~~----~~~~L~~L~ls~N~l~~l-~~~ 295 (454)
T 1jl5_A 227 LEEL-P-ELQNLPFLTTIYADNNLLKTL-PDL---PPSLEALNVRDNYLTDLPE----LPQSLTFLDVSENIFSGL-SEL 295 (454)
T ss_dssp CSSC-C-CCTTCTTCCEEECCSSCCSSC-CSC---CTTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCSEE-SCC
T ss_pred CCcc-c-ccCCCCCCCEEECCCCcCCcc-ccc---ccccCEEECCCCcccccCc----ccCcCCEEECcCCccCcc-cCc
Confidence 9965 5 499999999999999999864 332 3667777777777776332 236777778887777752 211
Q ss_pred hhcCCccceeeccccccCCCCCccccCC-CCCCcEEcCCCCCCCcchhccCCCCCCcEEEccCCcccCCCCccccccccc
Q 002069 308 LGSLTNLATLYFSTNALSGSIPNEITNL-RSLSDLQLSENTLNGSIPLALGNLTKLVSLDLSINKLSGSIPLSFASLTSL 386 (973)
Q Consensus 308 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L 386 (973)
.++|++|++++|.+++ ++ .+ ++|++|++++|++++ +|.. +++|++|++++|+++. .|. .+++|
T Consensus 296 ---~~~L~~L~l~~N~l~~-i~----~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~-lp~---~l~~L 359 (454)
T 1jl5_A 296 ---PPNLYYLNASSNEIRS-LC----DLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAE-VPE---LPQNL 359 (454)
T ss_dssp ---CTTCCEEECCSSCCSE-EC----CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTC
T ss_pred ---CCcCCEEECcCCcCCc-cc----CCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCcccc-ccc---hhhhc
Confidence 2577777777777764 22 22 477777777777775 3332 4677777777777774 444 35677
Q ss_pred chhccccccccc--CCCcccCCCCCCCEEEccCCCCCCCcchhhhhhcccceEEEeeCccccc--ccCCCCCCCccccee
Q 002069 387 TTLYLYENSLCD--SIPKEIGDMKSLSILDLSSNKLNGSIPLSLANLTNSLKVLYLSSNHIVG--EIPLGHGKFSSLIQL 462 (973)
Q Consensus 387 ~~L~L~~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~L~~n~l~~--~~~~~~~~~~~L~~L 462 (973)
++|++++|++++ .+|..+.. |+.|.+.+.+|.. .++|++|++++|.+++ .+| ++++.|
T Consensus 360 ~~L~L~~N~l~~l~~ip~~l~~--------L~~n~~~~~i~~~----~~~L~~L~ls~N~l~~~~~iP------~sl~~L 421 (454)
T 1jl5_A 360 KQLHVEYNPLREFPDIPESVED--------LRMNSHLAEVPEL----PQNLKQLHVETNPLREFPDIP------ESVEDL 421 (454)
T ss_dssp CEEECCSSCCSSCCCCCTTCCE--------EECCC---------------------------------------------
T ss_pred cEEECCCCCCCcCCCChHHHHh--------hhhcccccccccc----cCcCCEEECCCCcCCccccch------hhHhhe
Confidence 777777777776 44444432 2335555555542 2479999999999986 333 357788
Q ss_pred eccCCccCCCCCcc
Q 002069 463 ILNNNELSGQLSPE 476 (973)
Q Consensus 463 ~l~~N~l~~~~~~~ 476 (973)
.+++|.+.+..+..
T Consensus 422 ~~~~~~~~~~~~~~ 435 (454)
T 1jl5_A 422 RMNSERVVDPYEFA 435 (454)
T ss_dssp --------------
T ss_pred eCcCcccCCccccC
Confidence 88888887654433
No 48
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1.8e-41 Score=370.31 Aligned_cols=259 Identities=29% Similarity=0.420 Sum_probs=204.3
Q ss_pred HHhcCCcccccccCCCceeEEEEEcCCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEE
Q 002069 698 RATKNFDDEHCIGNGGQGSVYKAELPTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFV 777 (973)
Q Consensus 698 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 777 (973)
....+|++.+.||+|+||+||+|+. +|+.||||++...... ....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 34 i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 111 (309)
T 3p86_A 34 IPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFH-AERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSI 111 (309)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCS-HHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEE
T ss_pred CChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEE
Confidence 3467899999999999999999987 6889999998765433 3345789999999999999999999999999999999
Q ss_pred EEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCC--eEeecCCCCCeeecCCCceEEeccccccc
Q 002069 778 VYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPP--IVHRDISSKNVLLNLEYEAHVSDFGISKF 855 (973)
Q Consensus 778 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~--i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~ 855 (973)
||||+++++|.+++........+++..++.++.|++.|++|||+. + |+||||||+||+++.++.+||+|||+++.
T Consensus 112 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 188 (309)
T 3p86_A 112 VTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL 188 (309)
T ss_dssp EEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC----
T ss_pred EEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCcc
Confidence 999999999999998766555689999999999999999999999 8 99999999999999999999999999986
Q ss_pred ccCCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCC
Q 002069 856 LKLGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLPTP 935 (973)
Q Consensus 856 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 935 (973)
............||+.|+|||++.+..++.++|||||||++|||++|+.||........ .............+..
T Consensus 189 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~-----~~~~~~~~~~~~~~~~ 263 (309)
T 3p86_A 189 KASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQV-----VAAVGFKCKRLEIPRN 263 (309)
T ss_dssp -------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHH-----HHHHHHSCCCCCCCTT
T ss_pred ccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-----HHHHHhcCCCCCCCcc
Confidence 65544444567899999999999999999999999999999999999999975432110 0000001111122221
Q ss_pred chhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 936 LRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 936 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
.+..+.+++.+||+.||.+|||++++++.|+
T Consensus 264 ------~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~ 294 (309)
T 3p86_A 264 ------LNPQVAAIIEGCWTNEPWKRPSFATIMDLLR 294 (309)
T ss_dssp ------SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ------CCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 2235788999999999999999999999875
No 49
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=4.3e-41 Score=371.47 Aligned_cols=281 Identities=32% Similarity=0.581 Sum_probs=226.7
Q ss_pred CccccHHHHHHHhcCCcccccccCCCceeEEEEEcCCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeece
Q 002069 688 DGKIVHEEIIRATKNFDDEHCIGNGGQGSVYKAELPTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYG 767 (973)
Q Consensus 688 ~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~ 767 (973)
...++.+++....++|++.+.||+|+||.||+|+..+++.||||++........ ...+.+|+.+++.++||||+++++
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~--~~~~~~e~~~l~~l~h~~iv~~~~ 94 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGG--ELQFQTEVEMISMAVHRNLLRLRG 94 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----C--CCHHHHHHHGGGTCCCTTBCCCCE
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchH--HHHHHHHHHHHHhccCCCccceEE
Confidence 345678889999999999999999999999999888899999999976433222 246889999999999999999999
Q ss_pred eeeccceeEEEEEecCCCChHHHhccCcc-ccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceE
Q 002069 768 FCSHALHSFVVYEYLEMGSLAMILSNDAA-AEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAH 846 (973)
Q Consensus 768 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~k 846 (973)
++..+...++||||+++++|.++++.... ...+++..++.++.|++.|++|||+.+.++|+||||||+||+++.++.+|
T Consensus 95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~k 174 (326)
T 3uim_A 95 FCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 174 (326)
T ss_dssp EECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEE
T ss_pred EEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEE
Confidence 99999999999999999999999976543 34589999999999999999999998666899999999999999999999
Q ss_pred EecccccccccCCCC-cccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhh-------hhhhh
Q 002069 847 VSDFGISKFLKLGLS-NRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSIC-------SSLSS 918 (973)
Q Consensus 847 l~Dfg~a~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~-------~~~~~ 918 (973)
|+|||.++....... ......||+.|+|||++.+..++.++||||||+++|||++|+.||+...... .+...
T Consensus 175 l~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 254 (326)
T 3uim_A 175 VGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 254 (326)
T ss_dssp ECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTT
T ss_pred eccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHH
Confidence 999999987754333 2334569999999999998889999999999999999999999997432110 01100
Q ss_pred hh-hhhhhhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 919 NL-NIALDEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 919 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
.. ........+...... ........+.+++.+||+.||.+|||++||+++|+
T Consensus 255 ~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~ 307 (326)
T 3uim_A 255 LLKEKKLEALVDVDLQGN--YKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307 (326)
T ss_dssp TTSSCCSTTSSCTTCTTS--CCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHH
T ss_pred HhhchhhhhhcChhhccc--cCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhc
Confidence 00 111222222222222 23456778999999999999999999999999985
No 50
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=7.7e-41 Score=368.37 Aligned_cols=271 Identities=33% Similarity=0.505 Sum_probs=219.5
Q ss_pred HHHHHHhcCCcccccccCCCceeEEEEEcCCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccc
Q 002069 694 EEIIRATKNFDDEHCIGNGGQGSVYKAELPTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHAL 773 (973)
Q Consensus 694 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 773 (973)
.++...+++|++.+.||+|+||+||+|...+++.||||++..... ...+.+.+|+.++++++||||+++++++.+.+
T Consensus 32 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 108 (321)
T 2qkw_B 32 VDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESS---QGIEEFETEIETLSFCRHPHLVSLIGFCDERN 108 (321)
T ss_dssp SCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCS---SHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT
T ss_pred HHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccCh---HHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence 344456789999999999999999999988899999999875432 23578999999999999999999999999999
Q ss_pred eeEEEEEecCCCChHHHhccCcc-ccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccc
Q 002069 774 HSFVVYEYLEMGSLAMILSNDAA-AEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGI 852 (973)
Q Consensus 774 ~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~ 852 (973)
..++||||+++++|.+++..... ...+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.
T Consensus 109 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 185 (321)
T 2qkw_B 109 EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGI 185 (321)
T ss_dssp CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTT
T ss_pred eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeeccc
Confidence 99999999999999999975542 23689999999999999999999999 999999999999999999999999999
Q ss_pred cccccCCCC--cccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhh-----hhhh-hhhhhhh
Q 002069 853 SKFLKLGLS--NRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSIC-----SSLS-SNLNIAL 924 (973)
Q Consensus 853 a~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~-----~~~~-~~~~~~~ 924 (973)
++....... ......||+.|+|||++.+..++.++||||||+++|||++|+.||....... .+.. .......
T Consensus 186 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (321)
T 2qkw_B 186 SKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQL 265 (321)
T ss_dssp CEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCC
T ss_pred ccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccH
Confidence 986543221 2234568999999999998899999999999999999999999987432110 0000 0001112
Q ss_pred hhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 925 DEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
...+++...... .......+.+++.+||+.||++|||++|+++.|+
T Consensus 266 ~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 311 (321)
T 2qkw_B 266 EQIVDPNLADKI--RPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311 (321)
T ss_dssp CSSSSSSCTTCS--CHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHhcChhhcccc--CHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 222333332222 2456778999999999999999999999999885
No 51
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=4.6e-41 Score=365.15 Aligned_cols=251 Identities=25% Similarity=0.390 Sum_probs=209.3
Q ss_pred hcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVV 778 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 778 (973)
.++|++.+.||+|+||+||+|.. .+++.||||++...... ..+.+.+|+.++++++||||+++++++..++..++|
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 95 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP---KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 95 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCS---CHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccccc---HHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEE
Confidence 46899999999999999999965 58999999998643222 246788999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccC
Q 002069 779 YEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKL 858 (973)
Q Consensus 779 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 858 (973)
|||+++++|.++++.. .+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 96 ~e~~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 168 (297)
T 3fxz_A 96 MEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 168 (297)
T ss_dssp EECCTTCBHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EECCCCCCHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCC
Confidence 9999999999999753 478999999999999999999999 999999999999999999999999999988776
Q ss_pred CCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCCchh
Q 002069 859 GLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLPTPLRN 938 (973)
Q Consensus 859 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 938 (973)
.........||+.|+|||++.+..++.++||||+||++|||++|+.||.......... .......+....+
T Consensus 169 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~------~~~~~~~~~~~~~--- 239 (297)
T 3fxz_A 169 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY------LIATNGTPELQNP--- 239 (297)
T ss_dssp TTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH------HHHHHCSCCCSCG---
T ss_pred cccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH------HHHhCCCCCCCCc---
Confidence 6555566789999999999999999999999999999999999999997543221110 0111111111111
Q ss_pred hHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 939 VQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 939 ~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
...+..+.+++.+||+.||.+|||++|+++.
T Consensus 240 -~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 240 -EKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp -GGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -cccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 1233457889999999999999999999873
No 52
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=4.4e-40 Score=360.50 Aligned_cols=255 Identities=25% Similarity=0.438 Sum_probs=207.1
Q ss_pred hcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVV 778 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 778 (973)
.++|++.+.||+|+||+||+|.. .+++.||+|++... .....+.+.+|+.++++++||||+++++++.+++..++|
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 85 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF---DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFI 85 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEE
Confidence 36799999999999999999965 47999999998643 334468899999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccC
Q 002069 779 YEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKL 858 (973)
Q Consensus 779 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 858 (973)
|||+++++|.++++... ..+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.++....
T Consensus 86 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 160 (310)
T 3s95_A 86 TEYIKGGTLRGIIKSMD--SQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVD 160 (310)
T ss_dssp EECCTTCBHHHHHHHCC--TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC-
T ss_pred EEecCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceeccc
Confidence 99999999999997543 4589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCcc--------------cccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhh
Q 002069 859 GLSNR--------------TELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIAL 924 (973)
Q Consensus 859 ~~~~~--------------~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~ 924 (973)
..... ....||+.|+|||++.+..++.++||||||+++|||++|..||..................
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~ 240 (310)
T 3s95_A 161 EKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFL 240 (310)
T ss_dssp -------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHH
T ss_pred ccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccc
Confidence 32211 1457999999999999999999999999999999999999998643221111111111111
Q ss_pred hhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 925 DEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
.....+.. +..+.+++.+||+.||++|||++++++.|+
T Consensus 241 ~~~~~~~~----------~~~l~~li~~~l~~dP~~Rps~~~l~~~L~ 278 (310)
T 3s95_A 241 DRYCPPNC----------PPSFFPITVRCCDLDPEKRPSFVKLEHWLE 278 (310)
T ss_dssp HHTCCTTC----------CTTHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cccCCCCC----------CHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 11111111 124678999999999999999999999875
No 53
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=3.1e-40 Score=362.81 Aligned_cols=262 Identities=26% Similarity=0.376 Sum_probs=214.6
Q ss_pred ccccHHHHHHHhcC----------CcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcC
Q 002069 689 GKIVHEEIIRATKN----------FDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKI 757 (973)
Q Consensus 689 ~~~~~~~~~~~~~~----------~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l 757 (973)
+.++.+++..+++. |+..+.||+|+||.||+|... +|+.||||++...... ..+.+.+|+.+++++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~---~~~~~~~E~~~l~~l 99 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQ---RRELLFNEVVIMRDY 99 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC---SHHHHHHHHHHHTTC
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchh---HHHHHHHHHHHHHhC
Confidence 45667777777654 777889999999999999765 8999999998754332 257789999999999
Q ss_pred CCCceeeeceeeeccceeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCe
Q 002069 758 RHRNIVKFYGFCSHALHSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNV 837 (973)
Q Consensus 758 ~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Ni 837 (973)
+||||+++++++..++..++||||+++++|.++++.. .+++.++..++.|++.|++|||+. +|+||||||+||
T Consensus 100 ~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NI 172 (321)
T 2c30_A 100 QHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV----RLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSI 172 (321)
T ss_dssp CCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGE
T ss_pred CCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHE
Confidence 9999999999999999999999999999999998643 589999999999999999999999 999999999999
Q ss_pred eecCCCceEEecccccccccCCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhh
Q 002069 838 LLNLEYEAHVSDFGISKFLKLGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLS 917 (973)
Q Consensus 838 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~ 917 (973)
+++.++.+||+|||+++.............||+.|+|||++.+..++.++||||||+++|||++|+.||........
T Consensus 173 ll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~--- 249 (321)
T 2c30_A 173 LLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQA--- 249 (321)
T ss_dssp EECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH---
T ss_pred EECCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH---
Confidence 99999999999999998776554445567899999999999999999999999999999999999999974332110
Q ss_pred hhhhhhhhhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 918 SNLNIALDEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
.........+.... ....+..+.+++.+||+.||++|||++++++.
T Consensus 250 ---~~~~~~~~~~~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 250 ---MKRLRDSPPPKLKN----SHKVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp ---HHHHHHSSCCCCTT----GGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ---HHHHhcCCCCCcCc----cccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 01111111122111 11223457889999999999999999999874
No 54
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=1.8e-40 Score=364.65 Aligned_cols=250 Identities=24% Similarity=0.345 Sum_probs=207.1
Q ss_pred hcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVV 778 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 778 (973)
.++|++.+.||+|+||.||+|.. .+|+.||||++...... ....+.+.+|+.+++.++||||+++++++..++..++|
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 92 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLN-PTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLI 92 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE
Confidence 46899999999999999999965 58999999998754332 23457788999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccC
Q 002069 779 YEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKL 858 (973)
Q Consensus 779 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 858 (973)
|||+++++|.+++... ..+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 93 ~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 166 (328)
T 3fe3_A 93 MEYASGGEVFDYLVAH---GRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTV 166 (328)
T ss_dssp ECCCTTCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSS
T ss_pred EECCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCC
Confidence 9999999999998654 3588999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCcccccccccCcccccccccCCCC-CccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCCch
Q 002069 859 GLSNRTELAGTFGYIAPELAYTMKVT-EKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLPTPLR 937 (973)
Q Consensus 859 ~~~~~~~~~g~~~y~aPE~~~~~~~~-~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 937 (973)
. .......||+.|+|||++.+..+. .++||||+||++|||++|+.||+.... ..............+..
T Consensus 167 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~---------~~~~~~i~~~~~~~p~~ 236 (328)
T 3fe3_A 167 G-GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL---------KELRERVLRGKYRIPFY 236 (328)
T ss_dssp S-CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSH---------HHHHHHHHHCCCCCCTT
T ss_pred C-CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCH---------HHHHHHHHhCCCCCCCC
Confidence 4 334556899999999999888775 789999999999999999999975431 11111111122111111
Q ss_pred hhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 938 NVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 938 ~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
.+..+.+++.+||+.||.+|||++|+++.
T Consensus 237 ----~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 237 ----MSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp ----SCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred ----CCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 22346789999999999999999999864
No 55
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=4e-40 Score=366.13 Aligned_cols=255 Identities=20% Similarity=0.253 Sum_probs=209.2
Q ss_pred hcCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcc---hhhHHHHHHHHHHhhcCCCCceeeeceeeecccee
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGE---MACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHS 775 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 775 (973)
.+.|++.+.||+|+||+||+|... +|+.||+|++....... ....+.+.+|+.++++++||||+++++++.++...
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 467999999999999999999654 79999999987543221 11357899999999999999999999999999999
Q ss_pred EEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCC----ceEEeccc
Q 002069 776 FVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEY----EAHVSDFG 851 (973)
Q Consensus 776 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~----~~kl~Dfg 851 (973)
++||||+++|+|.+++... ..+++.++..++.||+.|++|||+. +|+||||||+||+++.++ .+||+|||
T Consensus 91 ~lv~e~~~gg~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DFG 164 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQK---ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164 (361)
T ss_dssp EEEEECCCSCBHHHHHTTC---SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCS
T ss_pred EEEEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEecC
Confidence 9999999999999999654 3689999999999999999999999 999999999999998876 79999999
Q ss_pred ccccccCCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCC
Q 002069 852 ISKFLKLGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPR 931 (973)
Q Consensus 852 ~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (973)
+++..... .......||+.|+|||++.+..++.++||||+||++|+|++|..||...... .....+....
T Consensus 165 ~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~---------~~~~~i~~~~ 234 (361)
T 2yab_A 165 LAHEIEDG-VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ---------ETLANITAVS 234 (361)
T ss_dssp SCEECCTT-CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH---------HHHHHHHTTC
T ss_pred CceEcCCC-CccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH---------HHHHHHHhcC
Confidence 99877654 2334567999999999999989999999999999999999999999743321 1112222222
Q ss_pred CCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 932 LPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 932 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
.......+...+..+.+++.+||+.||.+|||++|+++.
T Consensus 235 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 273 (361)
T 2yab_A 235 YDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (361)
T ss_dssp CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred CCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 222211122234567899999999999999999999864
No 56
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=5.2e-40 Score=368.02 Aligned_cols=256 Identities=24% Similarity=0.359 Sum_probs=208.4
Q ss_pred hcCCcccccccCCCceeEEEEEc--------CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcC-CCCceeeeceeee
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL--------PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKI-RHRNIVKFYGFCS 770 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~ 770 (973)
.++|++.+.||+|+||.||+|.+ .++..||||+++... .....+.+.+|+.+++++ +||||+++++++.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~ 157 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 157 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTC--BHHHHHHHHHHHHHHHHSCCCTTBCCEEEEEC
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCc--CHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEc
Confidence 46899999999999999999964 245679999997653 333467899999999999 8999999999999
Q ss_pred ccceeEEEEEecCCCChHHHhccCcc-------------ccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCe
Q 002069 771 HALHSFVVYEYLEMGSLAMILSNDAA-------------AEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNV 837 (973)
Q Consensus 771 ~~~~~~lv~e~~~~~~L~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Ni 837 (973)
+.+..|+||||+++|+|.++++.... ...+++.+++.++.||+.||+|||++ +|+||||||+||
T Consensus 158 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NI 234 (370)
T 2psq_A 158 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNV 234 (370)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGE
T ss_pred cCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhE
Confidence 99999999999999999999976442 23578999999999999999999999 999999999999
Q ss_pred eecCCCceEEecccccccccCCCC--cccccccccCcccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcchhhhhh
Q 002069 838 LLNLEYEAHVSDFGISKFLKLGLS--NRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSICS 914 (973)
Q Consensus 838 ll~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~ 914 (973)
+++.++.+||+|||+++....... ......+|+.|+|||++.+..++.++|||||||++|||+| |+.||.......
T Consensus 235 ll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~- 313 (370)
T 2psq_A 235 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE- 313 (370)
T ss_dssp EECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG-
T ss_pred EECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHH-
Confidence 999999999999999987654322 2233457889999999999999999999999999999999 999997433110
Q ss_pred hhhhhhhhhhhhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 915 SLSSNLNIALDEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
..........+..+. .....+.+++.+||+.||.+||++.|+++.|+
T Consensus 314 -----~~~~~~~~~~~~~~~------~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~ 360 (370)
T 2psq_A 314 -----LFKLLKEGHRMDKPA------NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 360 (370)
T ss_dssp -----HHHHHHTTCCCCCCT------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -----HHHHHhcCCCCCCCC------CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 011111111111121 12345788999999999999999999999875
No 57
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.8e-40 Score=362.68 Aligned_cols=252 Identities=20% Similarity=0.232 Sum_probs=208.9
Q ss_pred hcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVV 778 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 778 (973)
.++|++.+.||+|+||+||+|.. .+++.||+|.+... ......+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~----~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 79 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK----GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMI 79 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC----THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC----cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEE
Confidence 46899999999999999999965 47889999998743 22356788999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecC--CCceEEecccccccc
Q 002069 779 YEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNL--EYEAHVSDFGISKFL 856 (973)
Q Consensus 779 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~--~~~~kl~Dfg~a~~~ 856 (973)
|||+++++|.+++.... ..+++.+++.++.|++.|++|||+. +|+||||||+||+++. ++.+||+|||.++..
T Consensus 80 ~e~~~g~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~ 154 (321)
T 1tki_A 80 FEFISGLDIFERINTSA--FELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQL 154 (321)
T ss_dssp ECCCCCCBHHHHHTSSS--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEEC
T ss_pred EEeCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeEC
Confidence 99999999999996543 3689999999999999999999999 9999999999999987 789999999999877
Q ss_pred cCCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCCc
Q 002069 857 KLGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLPTPL 936 (973)
Q Consensus 857 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (973)
... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||...... ...............
T Consensus 155 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---------~~~~~i~~~~~~~~~ 224 (321)
T 1tki_A 155 KPG-DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ---------QIIENIMNAEYTFDE 224 (321)
T ss_dssp CTT-CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH---------HHHHHHHHTCCCCCH
T ss_pred CCC-CccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH---------HHHHHHHcCCCCCCh
Confidence 654 2334567999999999999888999999999999999999999999743321 111222222222222
Q ss_pred hhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 937 RNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 937 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
......+..+.+++.+||+.||.+|||++|+++.
T Consensus 225 ~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 225 EAFKEISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp HHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred hhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 2222334568899999999999999999999874
No 58
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=2.9e-40 Score=358.43 Aligned_cols=258 Identities=24% Similarity=0.337 Sum_probs=206.5
Q ss_pred hcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVV 778 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 778 (973)
.++|++.+.||+|+||.||+|.. .+++.||+|++...........+.+.+|+.++++++||||+++++++.+++..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 46799999999999999999964 57899999998766555556678899999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccC
Q 002069 779 YEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKL 858 (973)
Q Consensus 779 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 858 (973)
|||+++++|.+++... ..+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.++....
T Consensus 90 ~e~~~g~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 163 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESH---GPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSE 163 (294)
T ss_dssp EECCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC--
T ss_pred EeCCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCcccccc
Confidence 9999999999999654 3689999999999999999999999 999999999999999999999999999987654
Q ss_pred CCC-cccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCC-c
Q 002069 859 GLS-NRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLPTP-L 936 (973)
Q Consensus 859 ~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 936 (973)
... ......||+.|+|||.+.+..++.++||||+|+++|||+||+.||......... ...+....+.. .
T Consensus 164 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~---------~~~~~~~~~~~~~ 234 (294)
T 4eqm_A 164 TSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIA---------IKHIQDSVPNVTT 234 (294)
T ss_dssp -----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHH---------HHHHSSCCCCHHH
T ss_pred ccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHH---------HHHhhccCCCcch
Confidence 322 233457999999999999999999999999999999999999999754321110 11111111111 0
Q ss_pred hhhHHHHHHHHHHHhcccCCCCCCCC-CHHHHHHHhc
Q 002069 937 RNVQDKLISIMEVSISCLDESPTSRP-TMQKVSQLLK 972 (973)
Q Consensus 937 ~~~~~~~~~l~~li~~cl~~dP~~RP-s~~ev~~~L~ 972 (973)
......+..+.+++.+|++.||.+|| +++++.+.|+
T Consensus 235 ~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~ 271 (294)
T 4eqm_A 235 DVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLS 271 (294)
T ss_dssp HSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHH
T ss_pred hcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHH
Confidence 01112334578899999999999998 8888887764
No 59
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=4e-40 Score=375.80 Aligned_cols=257 Identities=19% Similarity=0.233 Sum_probs=209.0
Q ss_pred HHhcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeE
Q 002069 698 RATKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSF 776 (973)
Q Consensus 698 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 776 (973)
...++|++.+.||+|+||+||+|.. .+|+.||+|++...... ....+.+.+|+.++++++||||+++++++.+++..+
T Consensus 8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 86 (444)
T 3soa_A 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLS-ARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHY 86 (444)
T ss_dssp HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCH-HHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEE
T ss_pred cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCC-HHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEE
Confidence 3467899999999999999999954 58999999998765432 233577899999999999999999999999999999
Q ss_pred EEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeec---CCCceEEeccccc
Q 002069 777 VVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLN---LEYEAHVSDFGIS 853 (973)
Q Consensus 777 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~---~~~~~kl~Dfg~a 853 (973)
+||||+++|+|.+++... ..+++.++..++.||+.|++|||+. +|+||||||+||+++ .++.+||+|||++
T Consensus 87 lv~E~~~gg~L~~~i~~~---~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a 160 (444)
T 3soa_A 87 LIFDLVTGGELFEDIVAR---EYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLA 160 (444)
T ss_dssp EEECCCBCCBHHHHHHHC---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSC
T ss_pred EEEEeCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCcee
Confidence 999999999999998754 3589999999999999999999999 999999999999998 4578999999999
Q ss_pred ccccCCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCC
Q 002069 854 KFLKLGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLP 933 (973)
Q Consensus 854 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 933 (973)
+.............||+.|+|||++.+..++.++||||+||++|+|++|..||...... ............
T Consensus 161 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~---------~~~~~i~~~~~~ 231 (444)
T 3soa_A 161 IEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH---------RLYQQIKAGAYD 231 (444)
T ss_dssp BCCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---------HHHHHHHHTCCC
T ss_pred EEecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHH---------HHHHHHHhCCCC
Confidence 87766555555678999999999999999999999999999999999999999743321 111111111111
Q ss_pred CCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 934 TPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 934 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
.+...+...+..+.+++.+||+.||.+|||++|+++.
T Consensus 232 ~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 232 FPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp CCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 1111112233457889999999999999999999874
No 60
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=4.4e-40 Score=362.50 Aligned_cols=252 Identities=22% Similarity=0.259 Sum_probs=206.8
Q ss_pred hcCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVV 778 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 778 (973)
.++|++.+.||+|+||+||+|+.. +|+.||+|++.............+.+|+.+++.++||||+++++++...+..++|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 367999999999999999999654 7999999998643211222356788999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccC
Q 002069 779 YEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKL 858 (973)
Q Consensus 779 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 858 (973)
|||+++|+|.+++... ..+++.+++.++.||+.|++|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 84 ~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 157 (337)
T 1o6l_A 84 MEYANGGELFFHLSRE---RVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS 157 (337)
T ss_dssp EECCTTCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred EeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhccc
Confidence 9999999999998643 3688999999999999999999999 999999999999999999999999999986544
Q ss_pred CCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCCchh
Q 002069 859 GLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLPTPLRN 938 (973)
Q Consensus 859 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 938 (973)
.........||+.|+|||++.+..++.++||||+||++|||++|+.||....... ........ ...++..
T Consensus 158 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-----~~~~i~~~--~~~~p~~--- 227 (337)
T 1o6l_A 158 DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER-----LFELILME--EIRFPRT--- 227 (337)
T ss_dssp TTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-----HHHHHHHC--CCCCCTT---
T ss_pred CCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHH-----HHHHHHcC--CCCCCCC---
Confidence 4444556789999999999999999999999999999999999999997433210 00111111 1122221
Q ss_pred hHHHHHHHHHHHhcccCCCCCCCC-----CHHHHHHH
Q 002069 939 VQDKLISIMEVSISCLDESPTSRP-----TMQKVSQL 970 (973)
Q Consensus 939 ~~~~~~~l~~li~~cl~~dP~~RP-----s~~ev~~~ 970 (973)
.+..+.+++.+||+.||.+|| +++|+++.
T Consensus 228 ---~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 228 ---LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp ---SCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred ---CCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 223577899999999999999 89998764
No 61
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.3e-40 Score=364.38 Aligned_cols=251 Identities=24% Similarity=0.321 Sum_probs=197.6
Q ss_pred HhcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEE
Q 002069 699 ATKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFV 777 (973)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 777 (973)
..++|++.+.||+|+||+||+|.. .+|+.||||++....... ..+.+.+|+.++++++||||+++++++...+..++
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~--~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~l 85 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGS--DLPRIKTEIEALKNLRHQHICQLYHVLETANKIFM 85 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC-----CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccch--HHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEE
Confidence 357899999999999999999964 589999999987654332 24678899999999999999999999999999999
Q ss_pred EEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEeccccccccc
Q 002069 778 VYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLK 857 (973)
Q Consensus 778 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 857 (973)
||||+++++|.+++... ..+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 86 v~E~~~gg~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 159 (347)
T 3zgw_A 86 VLEYCPGGELFDYIISQ---DRLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPK 159 (347)
T ss_dssp EEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC--
T ss_pred EEeCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCccccc
Confidence 99999999999998643 3589999999999999999999999 99999999999999999999999999988665
Q ss_pred CCC-CcccccccccCcccccccccCCC-CCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCC
Q 002069 858 LGL-SNRTELAGTFGYIAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLPTP 935 (973)
Q Consensus 858 ~~~-~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 935 (973)
... .......||+.|+|||++.+..+ +.++||||+||++|||++|+.||+..... .....+.......+
T Consensus 160 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~---------~~~~~i~~~~~~~p 230 (347)
T 3zgw_A 160 GNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVM---------ALYKKIMRGKYDVP 230 (347)
T ss_dssp ------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHH---------HHHHHHHHTCCCCC
T ss_pred CCCCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHH---------HHHHHHHcCCCCCC
Confidence 432 23345679999999999988775 88999999999999999999999753321 11111111111111
Q ss_pred chhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 936 LRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 936 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
. ..+..+.+++.+||+.||.+|||++|+++.
T Consensus 231 ~----~~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 231 K----WLSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp T----TCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred C----CCCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 1 112346789999999999999999999864
No 62
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=3.2e-39 Score=353.25 Aligned_cols=276 Identities=31% Similarity=0.508 Sum_probs=224.2
Q ss_pred ccccHHHHHHHhcCCccc------ccccCCCceeEEEEEcCCCCEEEEEEcCCCCC-cchhhHHHHHHHHHHhhcCCCCc
Q 002069 689 GKIVHEEIIRATKNFDDE------HCIGNGGQGSVYKAELPTGEIVAVKKFHSPLP-GEMACQQEFLNEGNALTKIRHRN 761 (973)
Q Consensus 689 ~~~~~~~~~~~~~~~~~~------~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~n 761 (973)
..+..+++..++.+|... +.||+|+||.||+|.. +++.||||++..... ......+.+.+|+.++++++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 457788999999888877 8999999999999987 688999999875432 22334678999999999999999
Q ss_pred eeeeceeeeccceeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecC
Q 002069 762 IVKFYGFCSHALHSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNL 841 (973)
Q Consensus 762 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~ 841 (973)
|+++++++.+.+..++||||+++++|.+++........+++..++.++.|++.|++|||+. +++||||||+||+++.
T Consensus 92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~ 168 (307)
T 2nru_A 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDE 168 (307)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECT
T ss_pred eEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEcC
Confidence 9999999999999999999999999999997655556789999999999999999999999 9999999999999999
Q ss_pred CCceEEecccccccccCCCCc--ccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhh--hhhh
Q 002069 842 EYEAHVSDFGISKFLKLGLSN--RTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSIC--SSLS 917 (973)
Q Consensus 842 ~~~~kl~Dfg~a~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~--~~~~ 917 (973)
++.+||+|||.++........ .....|++.|+|||.+.+ .++.++||||||+++|+|++|+.||+...... ..+.
T Consensus 169 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 247 (307)
T 2nru_A 169 AFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIK 247 (307)
T ss_dssp TCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHH
T ss_pred CCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHH
Confidence 999999999999876543221 234578999999998865 48899999999999999999999997533211 0000
Q ss_pred h---hhhhhhhhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 918 S---NLNIALDEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 918 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
. .........+++.+... .......+.+++.+||+.||.+|||+++|++.|+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~ 302 (307)
T 2nru_A 248 EEIEDEEKTIEDYIDKKMNDA---DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302 (307)
T ss_dssp HHHHTTSCCHHHHSCSSCSCC---CHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred HHhhhhhhhhhhhcccccccc---chHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 0 00111233344443322 2345667889999999999999999999999875
No 63
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=1e-39 Score=357.03 Aligned_cols=264 Identities=20% Similarity=0.275 Sum_probs=202.9
Q ss_pred hcCCcccccccCCCceeEEEEEcCCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELPTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVVY 779 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 779 (973)
.++|++.+.||+|+||+||+|...+|+.||+|++...... ......+.+|+.++++++||||+++++++.++...++||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 98 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAED-EGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF 98 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC-------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEeccccc-chhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence 4789999999999999999998888999999999754322 223577889999999999999999999999999999999
Q ss_pred EecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccCC
Q 002069 780 EYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKLG 859 (973)
Q Consensus 780 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 859 (973)
||+++ ++.+++.... ..+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.++.....
T Consensus 99 e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 172 (311)
T 3niz_A 99 EFMEK-DLKKVLDENK--TGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIP 172 (311)
T ss_dssp ECCSE-EHHHHHHTCT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTSC
T ss_pred cCCCC-CHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCCC
Confidence 99984 7888876543 3589999999999999999999999 9999999999999999999999999999887655
Q ss_pred CCcccccccccCccccccccc-CCCCCccchHHHHHHHHHHHhCCCCCcchhhhhh--hh----hhhhhhh------hhh
Q 002069 860 LSNRTELAGTFGYIAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSICS--SL----SSNLNIA------LDE 926 (973)
Q Consensus 860 ~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~--~~----~~~~~~~------~~~ 926 (973)
........||+.|+|||++.+ ..++.++||||+||++|||++|+.||........ .. ....... ...
T Consensus 173 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 252 (311)
T 3niz_A 173 VRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPL 252 (311)
T ss_dssp CC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHH
T ss_pred cccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccch
Confidence 455556688999999999876 5689999999999999999999999975332110 00 0000000 000
Q ss_pred hcCCCC---C-CCch-hhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 927 MLDPRL---P-TPLR-NVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 927 ~~~~~~---~-~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
...... . ..+. .......++.+++.+||+.||.+|||++|+++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 253 WKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp HHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 000000 0 0000 011123457899999999999999999999873
No 64
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=3.4e-40 Score=363.10 Aligned_cols=254 Identities=25% Similarity=0.414 Sum_probs=204.5
Q ss_pred hcCCcccccccCCCceeEEEEEcC----CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeecccee
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELP----TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHS 775 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 775 (973)
..+|++.+.||+|+||+||+|... .+..||||+++... .....+.+.+|+.++++++||||+++++++.+++..
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 125 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY--TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLA 125 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCC
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCcc
Confidence 467899999999999999999763 34569999997543 233467899999999999999999999999999999
Q ss_pred EEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEeccccccc
Q 002069 776 FVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKF 855 (973)
Q Consensus 776 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~ 855 (973)
++||||+++++|.++++... ..+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 126 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 200 (325)
T 3kul_A 126 MIVTEYMENGSLDTFLRTHD--GQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRV 200 (325)
T ss_dssp EEEEECCTTCBHHHHHHTTT--TCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEE
T ss_pred EEEeeCCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcccc
Confidence 99999999999999996543 4689999999999999999999999 999999999999999999999999999987
Q ss_pred ccCCCCc---ccccccccCcccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcchhhhhhhhhhhhhhhhhhhcCCC
Q 002069 856 LKLGLSN---RTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSICSSLSSNLNIALDEMLDPR 931 (973)
Q Consensus 856 ~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (973)
....... .....+|+.|+|||++.+..++.++||||||+++|||++ |+.||....... ............
T Consensus 201 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~------~~~~~~~~~~~~ 274 (325)
T 3kul_A 201 LEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD------VISSVEEGYRLP 274 (325)
T ss_dssp CC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH------HHHHHHTTCCCC
T ss_pred cccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHH------HHHHHHcCCCCC
Confidence 7543221 223346778999999998899999999999999999999 999996433210 011111111111
Q ss_pred CCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 932 LPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 932 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
.+. ..+..+.+++.+||+.||.+|||++++++.|+
T Consensus 275 ~~~------~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~ 309 (325)
T 3kul_A 275 APM------GCPHALHQLMLDCWHKDRAQRPRFSQIVSVLD 309 (325)
T ss_dssp CCT------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCC------CcCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 111 22345788999999999999999999999885
No 65
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=3.3e-39 Score=370.82 Aligned_cols=366 Identities=20% Similarity=0.216 Sum_probs=271.6
Q ss_pred CCCCCCcccCCCCCCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCcccCCcc
Q 002069 12 FSGSIPPEIGHLTHLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNE 91 (973)
Q Consensus 12 l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~ 91 (973)
..+..+..++.+++|++|++++|.+++. | .++.+++|++|++++|++++ +| ++.+++|++|++++|++++ +|
T Consensus 30 ~~~~~~~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~-~~-- 101 (457)
T 3bz5_A 30 MQATDTISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTN-LD-- 101 (457)
T ss_dssp CCTTSEEEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSC-CC--
T ss_pred cCcccccChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCce-ee--
Confidence 3445566788889999999999999864 5 68889999999999999885 44 8889999999999999984 44
Q ss_pred ccCccccceeeccCCcCCCCCCCccccCCccceeecccccccccCcccccccCCCCceecccCCCCCCCCccccCccccc
Q 002069 92 VGSLKSLSDLRLSNNSLNGSIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSGAIPFSLGNLTNLV 171 (973)
Q Consensus 92 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~ 171 (973)
++.+++|++|++++|++++ +| ++.+++|++|++++|++++ ++ ++++++|++|++++|...+.+ .++.+++|+
T Consensus 102 ~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~-l~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~ 173 (457)
T 3bz5_A 102 VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTE-ID--VSHNTQLTELDCHLNKKITKL--DVTPQTQLT 173 (457)
T ss_dssp CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSC-CC--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCC
T ss_pred cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCccce-ec--cccCCcCCEEECCCCCccccc--ccccCCcCC
Confidence 8889999999999999985 54 8889999999999999985 33 888999999999999654444 477889999
Q ss_pred eeeecccccCCCCCccccccCccceeeccccccccccccccCCCCcccEEecCCcccCCCCCccccccccccceeccccc
Q 002069 172 TLYIGINALSGSIPNEIGNLKSLSDLRLDYNTLSGSILYSFGNLTKLEILYLDVNALSGLIPNEIGNLKSLLALQLNYNT 251 (973)
Q Consensus 172 ~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~ 251 (973)
.|++++|++++ +| ++.+++|++|++++|+++++ .++.+++|+.|++++|+++++ | +..+++|+.|++++|+
T Consensus 174 ~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~i-p--~~~l~~L~~L~l~~N~ 244 (457)
T 3bz5_A 174 TLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTEI-D--VTPLTQLTYFDCSVNP 244 (457)
T ss_dssp EEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSC
T ss_pred EEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCccccc-C--ccccCCCCEEEeeCCc
Confidence 99999999985 55 78889999999999999876 478889999999999999885 4 7888999999999999
Q ss_pred ccCCCCcccCCcchhhhccCCCcccCchhhhhhccccccceEEcccccccCCcCchhhcCCccceeeccccccCCCCCc-
Q 002069 252 LSGSIPCSFGNLTKLVISCLGTNALSSSILEEIGNLKSLLHLQLNYNTLSGSIPLSLGSLTNLATLYFSTNALSGSIPN- 330 (973)
Q Consensus 252 l~~~~~~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~- 330 (973)
+++..+.. +++|+.++++.| +|+.|++++|.+.+.+| ++.+++|+.|++++|...+.+|.
T Consensus 245 l~~~~~~~---l~~L~~L~l~~n--------------~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~ 305 (457)
T 3bz5_A 245 LTELDVST---LSKLTTLHCIQT--------------DLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQ 305 (457)
T ss_dssp CSCCCCTT---CTTCCEEECTTC--------------CCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECT
T ss_pred CCCcCHHH---CCCCCEEeccCC--------------CCCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccC
Confidence 98766544 445555555443 34566677776655544 45667777777777765544442
Q ss_pred -------cccCCCCCCcEEcCCCCCCCcchhccCCCCCCcEEEccCCcccCCCCcccccccccchhcccccccccCCCcc
Q 002069 331 -------EITNLRSLSDLQLSENTLNGSIPLALGNLTKLVSLDLSINKLSGSIPLSFASLTSLTTLYLYENSLCDSIPKE 403 (973)
Q Consensus 331 -------~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 403 (973)
.++++++|++|++++|++++. .++++++|+.|++++|++++ ++.|..|++++|.+.+.
T Consensus 306 ~~~L~~L~l~~~~~L~~L~L~~N~l~~l---~l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~---- 370 (457)
T 3bz5_A 306 AAGITELDLSQNPKLVYLYLNNTELTEL---DVSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE---- 370 (457)
T ss_dssp TCCCSCCCCTTCTTCCEEECTTCCCSCC---CCTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE----
T ss_pred CCcceEechhhcccCCEEECCCCccccc---ccccCCcCcEEECCCCCCCC--------ccccccccccCCcEEec----
Confidence 133445677777777777763 26677777777777777764 24566667777777653
Q ss_pred cCCCCCCCEEEccCCCCCCCcchhhhhhcccceE
Q 002069 404 IGDMKSLSILDLSSNKLNGSIPLSLANLTNSLKV 437 (973)
Q Consensus 404 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~ 437 (973)
..+..|+.+++++|+++|.+|..+.....++..
T Consensus 371 -~~~~~l~~l~l~~N~l~g~ip~~~~~~~~~~~~ 403 (457)
T 3bz5_A 371 -GQTITMPKETLTNNSLTIAVSPDLLDQFGNPMN 403 (457)
T ss_dssp -EEEEECCCBCCBTTBEEEECCTTCBCTTSCCCE
T ss_pred -ceeeecCccccccCcEEEEcChhHhcccCceee
Confidence 234556666777777777777665544433333
No 66
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=5.4e-40 Score=368.11 Aligned_cols=253 Identities=23% Similarity=0.312 Sum_probs=201.2
Q ss_pred hcCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcC-CCCceeeeceeeeccceeEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKI-RHRNIVKFYGFCSHALHSFV 777 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~l 777 (973)
.++|++.+.||+|+||+||+|+.. +++.||+|+++..........+.+..|..++.++ +||||+++++++.+++..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 468999999999999999999654 7889999999754333333345678899998876 89999999999999999999
Q ss_pred EEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEeccccccccc
Q 002069 778 VYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLK 857 (973)
Q Consensus 778 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 857 (973)
||||+++|+|.+++... ..+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+|+...
T Consensus 131 V~E~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~~ 204 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 204 (396)
T ss_dssp EEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEEcCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeecc
Confidence 99999999999998753 3689999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCC--CCCCC
Q 002069 858 LGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDP--RLPTP 935 (973)
Q Consensus 858 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 935 (973)
..........||+.|+|||++.+..++.++||||+||++|||++|+.||........................ .++..
T Consensus 205 ~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~ 284 (396)
T 4dc2_A 205 RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS 284 (396)
T ss_dssp CTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCCTT
T ss_pred cCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCCCCc
Confidence 4444556678999999999999999999999999999999999999999643211111000011111111111 22221
Q ss_pred chhhHHHHHHHHHHHhcccCCCCCCCCCH
Q 002069 936 LRNVQDKLISIMEVSISCLDESPTSRPTM 964 (973)
Q Consensus 936 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 964 (973)
....+.+++.+||+.||.+||++
T Consensus 285 ------~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 285 ------LSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp ------SCHHHHHHHHHHTCSCTTTSTTC
T ss_pred ------CCHHHHHHHHHHhcCCHhHcCCC
Confidence 22346789999999999999995
No 67
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=1e-39 Score=359.41 Aligned_cols=255 Identities=19% Similarity=0.261 Sum_probs=207.2
Q ss_pred hcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcc---hhhHHHHHHHHHHhhcCCCCceeeeceeeecccee
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGE---MACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHS 775 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 775 (973)
.+.|++.+.||+|+||.||+|.. .+|+.||+|++....... ....+.+.+|+.++++++||||+++++++.++...
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 45699999999999999999965 479999999987543221 11357899999999999999999999999999999
Q ss_pred EEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCC----ceEEeccc
Q 002069 776 FVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEY----EAHVSDFG 851 (973)
Q Consensus 776 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~----~~kl~Dfg 851 (973)
++||||+++++|.+++... ..+++.+++.++.|++.|++|||+. +|+||||||+||+++.++ .+||+|||
T Consensus 90 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg 163 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEK---ESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163 (326)
T ss_dssp EEEEECCCSCBHHHHHTTS---SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEEEcCCCCCHHHHHHhc---CCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECC
Confidence 9999999999999999654 3589999999999999999999999 999999999999999887 89999999
Q ss_pred ccccccCCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCC
Q 002069 852 ISKFLKLGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPR 931 (973)
Q Consensus 852 ~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (973)
+++...... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||....... .........
T Consensus 164 ~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~---------~~~~~~~~~ 233 (326)
T 2y0a_A 164 LAHKIDFGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE---------TLANVSAVN 233 (326)
T ss_dssp TCEECCTTS-CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH---------HHHHHHHTC
T ss_pred CCeECCCCC-ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH---------HHHHHHhcC
Confidence 998775432 3345679999999999998899999999999999999999999997433210 111111111
Q ss_pred CCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 932 LPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 932 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
...........+..+.+++.+||+.||.+|||++|+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 234 YEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp CCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred CCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 111111112234457889999999999999999999874
No 68
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=3.4e-40 Score=367.14 Aligned_cols=258 Identities=20% Similarity=0.240 Sum_probs=207.7
Q ss_pred hcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCC--cchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLP--GEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSF 776 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 776 (973)
.++|++.+.||+|+||+||+|.. .+++.||||++..... ......+.+.+|+.+++.++||||+++++++.+.+..+
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 46799999999999999999965 5799999999853210 11112577999999999999999999999999999999
Q ss_pred EEEEecCCCChHHHhccCc-cccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCc---eEEecccc
Q 002069 777 VVYEYLEMGSLAMILSNDA-AAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYE---AHVSDFGI 852 (973)
Q Consensus 777 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~---~kl~Dfg~ 852 (973)
+||||+++++|.+++.... ....+++..++.++.||+.|++|||++ +|+||||||+||+++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 9999999999988875433 233589999999999999999999999 9999999999999987654 99999999
Q ss_pred cccccCCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCC
Q 002069 853 SKFLKLGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRL 932 (973)
Q Consensus 853 a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 932 (973)
++.............||+.|+|||++.+..++.++||||+||++|+|++|+.||..... ...........
T Consensus 180 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~----------~~~~~i~~~~~ 249 (351)
T 3c0i_A 180 AIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE----------RLFEGIIKGKY 249 (351)
T ss_dssp CEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH----------HHHHHHHHTCC
T ss_pred eeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH----------HHHHHHHcCCC
Confidence 98876554445567899999999999999999999999999999999999999974321 11111111222
Q ss_pred CCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 933 PTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 933 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
......+...+..+.+++.+||+.||++|||+.++++.
T Consensus 250 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 250 KMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp CCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 22211122234567899999999999999999999863
No 69
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=9.9e-40 Score=364.31 Aligned_cols=255 Identities=20% Similarity=0.275 Sum_probs=207.8
Q ss_pred HhcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEE
Q 002069 699 ATKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFV 777 (973)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 777 (973)
..++|++.+.||+|+||.||+|.. .+++.||+|++...... ....+.+.+|+.++++++||||+++++++.+++..++
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l 105 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS-ARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 105 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCC-HHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 356899999999999999999965 47899999999765433 2335778999999999999999999999999999999
Q ss_pred EEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCC---CceEEecccccc
Q 002069 778 VYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLE---YEAHVSDFGISK 854 (973)
Q Consensus 778 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~---~~~kl~Dfg~a~ 854 (973)
||||+++|+|.+++... ..+++.++..++.||+.|++|||+. +|+||||||+||+++.+ +.+||+|||+++
T Consensus 106 v~e~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~ 179 (362)
T 2bdw_A 106 VFDLVTGGELFEDIVAR---EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAI 179 (362)
T ss_dssp EECCCCSCBHHHHHTTC---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCB
T ss_pred EEecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcce
Confidence 99999999999998654 3589999999999999999999999 99999999999999865 459999999998
Q ss_pred cccCCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCC
Q 002069 855 FLKLGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLPT 934 (973)
Q Consensus 855 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 934 (973)
..... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||...... .............
T Consensus 180 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~---------~~~~~i~~~~~~~ 249 (362)
T 2bdw_A 180 EVNDS-EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH---------RLYAQIKAGAYDY 249 (362)
T ss_dssp CCTTC-CSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---------HHHHHHHHTCCCC
T ss_pred EecCC-cccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH---------HHHHHHHhCCCCC
Confidence 77543 2334567999999999999989999999999999999999999999743321 1111111111111
Q ss_pred CchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 935 PLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 935 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
+...+...+..+.+++.+||+.||.+|||++++++.
T Consensus 250 ~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 250 PSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp CTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred CcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 111122234457889999999999999999999864
No 70
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.6e-40 Score=363.77 Aligned_cols=250 Identities=22% Similarity=0.273 Sum_probs=202.4
Q ss_pred hcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVV 778 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 778 (973)
.++|.+.+.||+|+||+||+|.. .+++.||||++.............+.+|+.+++.++||||+++++++..++..++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 36899999999999999999965 68999999998643212222246788999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccC
Q 002069 779 YEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKL 858 (973)
Q Consensus 779 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 858 (973)
|||+ +|++.+++... ..+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 88 ~E~~-~g~l~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~ 160 (336)
T 3h4j_B 88 IEYA-GGELFDYIVEK---KRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTD 160 (336)
T ss_dssp ECCC-CEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTT
T ss_pred EECC-CCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccC
Confidence 9999 68898888643 3689999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCcccccccccCcccccccccCCC-CCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCCch
Q 002069 859 GLSNRTELAGTFGYIAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLPTPLR 937 (973)
Q Consensus 859 ~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 937 (973)
. .......||+.|+|||++.+..+ ++++||||+||++|+|++|+.||+.... ..............+
T Consensus 161 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~---------~~~~~~i~~~~~~~p-- 228 (336)
T 3h4j_B 161 G-NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFI---------PNLFKKVNSCVYVMP-- 228 (336)
T ss_dssp S-BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSS---------TTCBCCCCSSCCCCC--
T ss_pred C-cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccH---------HHHHHHHHcCCCCCc--
Confidence 4 23345679999999999988776 6899999999999999999999974321 111111111111111
Q ss_pred hhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 938 NVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 938 ~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
...+..+.+++.+||+.||.+|||++|+++.
T Consensus 229 --~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 229 --DFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp --TTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred --ccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 1123357789999999999999999999763
No 71
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.2e-39 Score=349.22 Aligned_cols=252 Identities=24% Similarity=0.398 Sum_probs=207.8
Q ss_pred hcCCcccccccCCCceeEEEEEcCCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELPTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVVY 779 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 779 (973)
.++|++.+.||+|+||+||+|...+++.||+|++...... .+++.+|+.++++++||||+++++++.+++..++||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS----EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVF 84 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBC----HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEecccccC----HHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEE
Confidence 3679999999999999999998888899999999854322 467999999999999999999999999999999999
Q ss_pred EecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccCC
Q 002069 780 EYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKLG 859 (973)
Q Consensus 780 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 859 (973)
||+++++|.++++... ..+++..++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||.++.....
T Consensus 85 e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 159 (269)
T 4hcu_A 85 EFMEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 159 (269)
T ss_dssp ECCTTCBHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred EeCCCCcHHHHHHhcC--cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecccccccccccc
Confidence 9999999999996543 3589999999999999999999999 9999999999999999999999999999866433
Q ss_pred C-CcccccccccCcccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCCch
Q 002069 860 L-SNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSICSSLSSNLNIALDEMLDPRLPTPLR 937 (973)
Q Consensus 860 ~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 937 (973)
. .......+++.|+|||.+.+..++.++||||+|+++|||++ |+.||....... .............+..
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~~-- 231 (269)
T 4hcu_A 160 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE------VVEDISTGFRLYKPRL-- 231 (269)
T ss_dssp HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH------HHHHHHTTCCCCCCTT--
T ss_pred ccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHH------HHHHHhcCccCCCCCc--
Confidence 2 12234557788999999998899999999999999999999 999997433210 0111111111111111
Q ss_pred hhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 938 NVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 938 ~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
.+..+.+++.+||+.||.+|||++++++.|+
T Consensus 232 ----~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~ 262 (269)
T 4hcu_A 232 ----ASTHVYQIMNHCWRERPEDRPAFSRLLRQLA 262 (269)
T ss_dssp ----SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ----CCHHHHHHHHHHccCCcccCcCHHHHHHHHH
Confidence 1335788999999999999999999999875
No 72
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=1.5e-39 Score=360.03 Aligned_cols=258 Identities=23% Similarity=0.310 Sum_probs=206.5
Q ss_pred hcCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcC-CCCceeeeceeeeccceeEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKI-RHRNIVKFYGFCSHALHSFV 777 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~l 777 (973)
.++|++.+.||+|+||.||+|+.. +++.||+|++...........+.+.+|..+++++ +||||+++++++.+++..++
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 367999999999999999999664 7899999999765444444567788999999988 89999999999999999999
Q ss_pred EEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEeccccccccc
Q 002069 778 VYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLK 857 (973)
Q Consensus 778 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 857 (973)
||||+++|+|.+++... ..+++..++.++.||+.|++|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 88 v~e~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~ 161 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 161 (345)
T ss_dssp EECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSC
T ss_pred EEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEecccccccc
Confidence 99999999999998643 3589999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCC--CCCCC
Q 002069 858 LGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDP--RLPTP 935 (973)
Q Consensus 858 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 935 (973)
..........||+.|+|||++.+..++.++||||+||++|||++|+.||........................ .++..
T Consensus 162 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~ 241 (345)
T 3a8x_A 162 RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS 241 (345)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCCCTT
T ss_pred CCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCCCCC
Confidence 4434455678999999999999999999999999999999999999999643211100000001111111111 22221
Q ss_pred chhhHHHHHHHHHHHhcccCCCCCCCCCH------HHHHH
Q 002069 936 LRNVQDKLISIMEVSISCLDESPTSRPTM------QKVSQ 969 (973)
Q Consensus 936 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~------~ev~~ 969 (973)
.+..+.+++.+||+.||.+||++ +|+++
T Consensus 242 ------~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~ 275 (345)
T 3a8x_A 242 ------LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG 275 (345)
T ss_dssp ------SCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHT
T ss_pred ------CCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhc
Confidence 23357789999999999999996 56654
No 73
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=4.1e-39 Score=354.23 Aligned_cols=264 Identities=19% Similarity=0.251 Sum_probs=209.0
Q ss_pred cCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccc--eeEE
Q 002069 701 KNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHAL--HSFV 777 (973)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--~~~l 777 (973)
++|++.+.||+|+||+||+|... +++.||||++...... ...+.+.+|++++++++||||+++++++.... ..++
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 86 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL--RPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL 86 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGG--SCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEecccccc--chHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEE
Confidence 67999999999999999999654 6999999998753222 22577889999999999999999999987654 7799
Q ss_pred EEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeee----cCCCceEEeccccc
Q 002069 778 VYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLL----NLEYEAHVSDFGIS 853 (973)
Q Consensus 778 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill----~~~~~~kl~Dfg~a 853 (973)
||||+++++|.++++.......+++.+++.++.|++.|++|||+. +|+||||||+||++ +.++.+||+|||.+
T Consensus 87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a 163 (319)
T 4euu_A 87 IMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (319)
T ss_dssp EEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTC
T ss_pred EEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCc
Confidence 999999999999998766555689999999999999999999999 99999999999999 77788999999999
Q ss_pred ccccCCCCcccccccccCcccccccc--------cCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhh
Q 002069 854 KFLKLGLSNRTELAGTFGYIAPELAY--------TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALD 925 (973)
Q Consensus 854 ~~~~~~~~~~~~~~g~~~y~aPE~~~--------~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 925 (973)
+...... ......||+.|+|||++. +..++.++|||||||++|||++|+.||.......... ........
T Consensus 164 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~-~~~~~~~~ 241 (319)
T 4euu_A 164 RELEDDE-QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNK-EVMYKIIT 241 (319)
T ss_dssp EECCTTC-CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCH-HHHHHHHH
T ss_pred eecCCCC-ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhH-HHHHHHhc
Confidence 8775542 334567999999999886 5678999999999999999999999996432111000 00000000
Q ss_pred hh-----------------cCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHh
Q 002069 926 EM-----------------LDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLL 971 (973)
Q Consensus 926 ~~-----------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L 971 (973)
.. ..+.++............+.+++.+||+.||++|||++|+++..
T Consensus 242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~ 304 (319)
T 4euu_A 242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAET 304 (319)
T ss_dssp HCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHH
T ss_pred CCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhcc
Confidence 00 00122222222345667788999999999999999999999864
No 74
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=3.8e-40 Score=365.50 Aligned_cols=252 Identities=23% Similarity=0.310 Sum_probs=200.4
Q ss_pred HhcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcC-CCCceeeeceeeeccceeE
Q 002069 699 ATKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKI-RHRNIVKFYGFCSHALHSF 776 (973)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 776 (973)
..++|++.+.||+|+||+||+|+. .+++.||||++...........+.+..|..+++.+ +||||+++++++.+++..|
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence 357899999999999999999965 47899999998743222233356788899999988 7999999999999999999
Q ss_pred EEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccc
Q 002069 777 VVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFL 856 (973)
Q Consensus 777 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~ 856 (973)
+||||+++|+|.++++.. ..+++.+++.++.||+.|++|||++ +|+||||||+||+++.++.+||+|||+|+..
T Consensus 101 lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~ 174 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQKS---RRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEG 174 (353)
T ss_dssp EEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred EEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeec
Confidence 999999999999999653 3589999999999999999999999 9999999999999999999999999999865
Q ss_pred cCCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCCc
Q 002069 857 KLGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLPTPL 936 (973)
Q Consensus 857 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (973)
...........||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+.......+.
T Consensus 175 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~---------~~~~~i~~~~~~~p~ 245 (353)
T 3txo_A 175 ICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED---------DLFEAILNDEVVYPT 245 (353)
T ss_dssp CC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHH---------HHHHHHHHCCCCCCT
T ss_pred ccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHH---------HHHHHHHcCCCCCCC
Confidence 54444555678999999999999889999999999999999999999999744321 111111111111111
Q ss_pred hhhHHHHHHHHHHHhcccCCCCCCCCCH------HHHHH
Q 002069 937 RNVQDKLISIMEVSISCLDESPTSRPTM------QKVSQ 969 (973)
Q Consensus 937 ~~~~~~~~~l~~li~~cl~~dP~~RPs~------~ev~~ 969 (973)
.....+.+++.+|++.||.+||++ +++++
T Consensus 246 ----~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 246 ----WLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp ----TSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred ----CCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 122346789999999999999998 67765
No 75
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=2.8e-38 Score=366.48 Aligned_cols=346 Identities=32% Similarity=0.429 Sum_probs=261.9
Q ss_pred CCCCCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCcccCCccccCcccccee
Q 002069 22 HLTHLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSLSDL 101 (973)
Q Consensus 22 ~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L 101 (973)
.+.+|++|++++|.++. +| .+..+++|++|++++|.++ .+|+ ++++++|++|++++|++++ ++. ++.+++|++|
T Consensus 44 ~l~~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~-~~~~-~~~l~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L 117 (466)
T 1o6v_A 44 DLDQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLT-DITP-LKNLTKLVDILMNNNQIAD-ITP-LANLTNLTGL 117 (466)
T ss_dssp HHHTCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCC-CCGG-GTTCTTCCEEECCSSCCCC-CGG-GTTCTTCCEE
T ss_pred HhccccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccC-Cchh-hhccccCCEEECCCCcccc-Chh-hcCCCCCCEE
Confidence 45677788888887774 45 3777788888888888877 3444 7778888888888888774 443 7778888888
Q ss_pred eccCCcCCCCCCCccccCCccceeecccccccccCcccccccCCCCceecccCCCCCCCCccccCccccceeeecccccC
Q 002069 102 RLSNNSLNGSIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSGAIPFSLGNLTNLVTLYIGINALS 181 (973)
Q Consensus 102 ~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~ 181 (973)
++++|++++ +|. +.++++|++|++++|++++ ++ .++++++|++|+++ |.+.+.. .+.++++|+.|++++|.++
T Consensus 118 ~L~~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~ 190 (466)
T 1o6v_A 118 TLFNNQITD-IDP-LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKVS 190 (466)
T ss_dssp ECCSSCCCC-CGG-GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCCC
T ss_pred ECCCCCCCC-ChH-HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcCC
Confidence 888888774 443 7778888888888888773 33 47778888888876 4444333 2777888888888888877
Q ss_pred CCCCccccccCccceeeccccccccccccccCCCCcccEEecCCcccCCCCCccccccccccceecccccccCCCCcccC
Q 002069 182 GSIPNEIGNLKSLSDLRLDYNTLSGSILYSFGNLTKLEILYLDVNALSGLIPNEIGNLKSLLALQLNYNTLSGSIPCSFG 261 (973)
Q Consensus 182 ~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 261 (973)
+ + ..+..+++|++|++++|++.+..+ ++.+++|+.|++++|+++++ ..+..+++|+.|++++|.+++..+ +.
T Consensus 191 ~-~-~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~ 262 (466)
T 1o6v_A 191 D-I-SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LS 262 (466)
T ss_dssp C-C-GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GT
T ss_pred C-C-hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hh
Confidence 4 3 347777888888888888776554 66778888888888887765 467777888888888888876555 77
Q ss_pred CcchhhhccCCCcccCchhhhhhccccccceEEcccccccCCcCchhhcCCccceeeccccccCCCCCccccCCCCCCcE
Q 002069 262 NLTKLVISCLGTNALSSSILEEIGNLKSLLHLQLNYNTLSGSIPLSLGSLTNLATLYFSTNALSGSIPNEITNLRSLSDL 341 (973)
Q Consensus 262 ~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 341 (973)
.+++|+.|++++|.+....+ +..+++|+.|++++|++++..+ ++.+++|+.|++++|.+++..| +..+++|++|
T Consensus 263 ~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L 336 (466)
T 1o6v_A 263 GLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRL 336 (466)
T ss_dssp TCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEE
T ss_pred cCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEe
Confidence 77888888888888776654 7788888888888888886544 7788888888888888886655 7788888888
Q ss_pred EcCCCCCCCcchhccCCCCCCcEEEccCCcccCCCCcccccccccchhccccccccc
Q 002069 342 QLSENTLNGSIPLALGNLTKLVSLDLSINKLSGSIPLSFASLTSLTTLYLYENSLCD 398 (973)
Q Consensus 342 ~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~ 398 (973)
++++|.+++. ..+..+++|+.|++++|++++..| +..+++|+.|++++|++++
T Consensus 337 ~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 337 FFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp ECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEEC
T ss_pred ECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccC
Confidence 8888888865 467888888888888888887666 7888888888888888876
No 76
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=1.8e-39 Score=347.68 Aligned_cols=252 Identities=25% Similarity=0.421 Sum_probs=207.7
Q ss_pred hcCCcccccccCCCceeEEEEEcCCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELPTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVVY 779 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 779 (973)
.++|++.+.||+|+||+||+|+..+++.||||++...... .+++.+|+.++++++||||+++++++.++...++||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMS----EDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVT 82 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBC----HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCc----HHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEE
Confidence 4679999999999999999999888889999999754322 467899999999999999999999999999999999
Q ss_pred EecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccCC
Q 002069 780 EYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKLG 859 (973)
Q Consensus 780 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 859 (973)
||+++++|.+++.... ..+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||.++.....
T Consensus 83 e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 157 (268)
T 3sxs_A 83 EYISNGCLLNYLRSHG--KGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDD 157 (268)
T ss_dssp ECCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTT
T ss_pred EccCCCcHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchh
Confidence 9999999999996543 3589999999999999999999999 9999999999999999999999999999876544
Q ss_pred CC-cccccccccCcccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCCch
Q 002069 860 LS-NRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSICSSLSSNLNIALDEMLDPRLPTPLR 937 (973)
Q Consensus 860 ~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 937 (973)
.. ......+++.|+|||.+.+..++.++||||+|+++|||++ |+.||+....... ............+..
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~------~~~~~~~~~~~~~~~-- 229 (268)
T 3sxs_A 158 QYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEV------VLKVSQGHRLYRPHL-- 229 (268)
T ss_dssp CEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHH------HHHHHTTCCCCCCTT--
T ss_pred hhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHH------HHHHHcCCCCCCCCc--
Confidence 22 2233456778999999998889999999999999999999 9999974432110 001111111111111
Q ss_pred hhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 938 NVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 938 ~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
.+..+.+++.+||+.||.+|||++++++.|+
T Consensus 230 ----~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~ 260 (268)
T 3sxs_A 230 ----ASDTIYQIMYSCWHELPEKRPTFQQLLSSIE 260 (268)
T ss_dssp ----SCHHHHHHHHHTTCSSGGGSCCHHHHHHHHG
T ss_pred ----ChHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 1235788999999999999999999999886
No 77
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=1.8e-38 Score=368.09 Aligned_cols=344 Identities=32% Similarity=0.413 Sum_probs=160.9
Q ss_pred CCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCcccCCccccCccccceeeccCCcCCCCCCCccccCCccceee
Q 002069 47 LSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSLSDLRLSNNSLNGSIPSSLGNLTNLVTLY 126 (973)
Q Consensus 47 l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 126 (973)
+++|+.|++++|.+. .+|. +..+++|++|++++|.+++ +|. ++.+++|++|++++|++++ ++. ++++++|++|+
T Consensus 45 l~~l~~L~l~~~~i~-~l~~-~~~l~~L~~L~Ls~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~ 118 (466)
T 1o6v_A 45 LDQVTTLQADRLGIK-SIDG-VEYLNNLTQINFSNNQLTD-ITP-LKNLTKLVDILMNNNQIAD-ITP-LANLTNLTGLT 118 (466)
T ss_dssp HHTCCEEECCSSCCC-CCTT-GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEE
T ss_pred hccccEEecCCCCCc-cCcc-hhhhcCCCEEECCCCccCC-chh-hhccccCCEEECCCCcccc-Chh-hcCCCCCCEEE
Confidence 344555555555544 3332 4445555555555555542 222 4445555555555555542 222 44555555555
Q ss_pred cccccccccCcccccccCCCCceecccCCCCCCCCccccCccccceeeecccccCCCCCccccccCccceeecccccccc
Q 002069 127 LHMNALSGSIPDEIGNLKFLSDLQVSYNTLSGAIPFSLGNLTNLVTLYIGINALSGSIPNEIGNLKSLSDLRLDYNTLSG 206 (973)
Q Consensus 127 L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 206 (973)
+++|++++. +. ++++++|++|++++|.+++. + .+..+++|+.|+++ |.+.+. + .+.++++|++|++++|.+++
T Consensus 119 L~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~l~-~~~~~~-~-~~~~l~~L~~L~l~~n~l~~ 191 (466)
T 1o6v_A 119 LFNNQITDI-DP-LKNLTNLNRLELSSNTISDI-S-ALSGLTSLQQLSFG-NQVTDL-K-PLANLTTLERLDISSNKVSD 191 (466)
T ss_dssp CCSSCCCCC-GG-GTTCTTCSEEEEEEEEECCC-G-GGTTCTTCSEEEEE-ESCCCC-G-GGTTCTTCCEEECCSSCCCC
T ss_pred CCCCCCCCC-hH-HcCCCCCCEEECCCCccCCC-h-hhccCCcccEeecC-CcccCc-h-hhccCCCCCEEECcCCcCCC
Confidence 555555422 21 44555555555555554422 2 24445555555553 233321 1 24445555555555555443
Q ss_pred ccccccCCCCcccEEecCCcccCCCCCccccccccccceecccccccCCCCcccCCcchhhhccCCCcccCchhhhhhcc
Q 002069 207 SILYSFGNLTKLEILYLDVNALSGLIPNEIGNLKSLLALQLNYNTLSGSIPCSFGNLTKLVISCLGTNALSSSILEEIGN 286 (973)
Q Consensus 207 ~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~n~i~~~~~~~~~~ 286 (973)
+. .+..+++|+.|++++|.+++..| ++.+++|+.|++++|.+++. ..+..+++|+.|++++|.+....+ +..
T Consensus 192 ~~--~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~ 263 (466)
T 1o6v_A 192 IS--VLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSG 263 (466)
T ss_dssp CG--GGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTT
T ss_pred Ch--hhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhc
Confidence 32 24445555555555555544322 44445555555555554432 234444555555555555444332 444
Q ss_pred ccccceEEcccccccCCcCchhhcCCccceeeccccccCCCCCccccCCCCCCcEEcCCCCCCCcchhccCCCCCCcEEE
Q 002069 287 LKSLLHLQLNYNTLSGSIPLSLGSLTNLATLYFSTNALSGSIPNEITNLRSLSDLQLSENTLNGSIPLALGNLTKLVSLD 366 (973)
Q Consensus 287 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 366 (973)
+++|++|++++|.+++..+ +..+++|+.|++++|.+++..+ +..+++|+.|++++|.+++..| +..+++|++|+
T Consensus 264 l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~ 337 (466)
T 1o6v_A 264 LTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLF 337 (466)
T ss_dssp CTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEE
T ss_pred CCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeE
Confidence 5555555555555543322 4445555555555555543322 4445555555555555544333 34445555555
Q ss_pred ccCCcccCCCCcccccccccchhcccccccccCCCcccCCCCCCCEEEccCCCCC
Q 002069 367 LSINKLSGSIPLSFASLTSLTTLYLYENSLCDSIPKEIGDMKSLSILDLSSNKLN 421 (973)
Q Consensus 367 Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 421 (973)
+++|++++. ..+..+++|+.|++++|++++..| +..+++|+.|++++|+++
T Consensus 338 l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~ 388 (466)
T 1o6v_A 338 FYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWT 388 (466)
T ss_dssp CCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEE
T ss_pred CCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCccc
Confidence 555555432 234445555555555555544333 444555555555555544
No 78
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=2.3e-39 Score=358.76 Aligned_cols=253 Identities=20% Similarity=0.354 Sum_probs=205.5
Q ss_pred HhcCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccc----
Q 002069 699 ATKNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHAL---- 773 (973)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~---- 773 (973)
..++|++.+.||+|+||.||+|... +|+.||||++..... ....+.+.+|+.++++++||||+++++++.+..
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 81 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNR--ELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKW 81 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCST--TTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHH
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCc--hhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchh
Confidence 3567999999999999999999765 899999999975432 234688999999999999999999999985543
Q ss_pred -----------------------------------------------------eeEEEEEecCCCChHHHhccCccccCC
Q 002069 774 -----------------------------------------------------HSFVVYEYLEMGSLAMILSNDAAAEEF 800 (973)
Q Consensus 774 -----------------------------------------------------~~~lv~e~~~~~~L~~~l~~~~~~~~~ 800 (973)
..++||||+++++|.++++........
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~ 161 (332)
T 3qd2_B 82 QEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDR 161 (332)
T ss_dssp HHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGS
T ss_pred hhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccch
Confidence 379999999999999999887766677
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccCCC------------Cccccccc
Q 002069 801 GWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKLGL------------SNRTELAG 868 (973)
Q Consensus 801 ~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~------------~~~~~~~g 868 (973)
++..++.++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++...... .......|
T Consensus 162 ~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~g 238 (332)
T 3qd2_B 162 EHGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVG 238 (332)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-
T ss_pred hhHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCC
Confidence 8888999999999999999999 99999999999999999999999999998776542 12234579
Q ss_pred ccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCCchhhHHHHHHHHH
Q 002069 869 TFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLPTPLRNVQDKLISIME 948 (973)
Q Consensus 869 ~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 948 (973)
|+.|+|||++.+..++.++||||+||++|||++|..|+...... .........+ .........+.+
T Consensus 239 t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~~-----------~~~~~~~~~~---~~~~~~~~~~~~ 304 (332)
T 3qd2_B 239 TKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRI-----------ITDVRNLKFP---LLFTQKYPQEHM 304 (332)
T ss_dssp CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHHH-----------HHHHHTTCCC---HHHHHHCHHHHH
T ss_pred CcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHHH-----------HHHhhccCCC---cccccCChhHHH
Confidence 99999999999999999999999999999999998885422111 1111112221 122334456788
Q ss_pred HHhcccCCCCCCCCCHHHHHHH
Q 002069 949 VSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 949 li~~cl~~dP~~RPs~~ev~~~ 970 (973)
++.+||+.||.+|||++|+++.
T Consensus 305 li~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 305 MVQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHHHHCSSGGGSCCHHHHHHS
T ss_pred HHHHHccCCCCcCCCHHHHhhc
Confidence 9999999999999999999874
No 79
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=9.9e-40 Score=359.27 Aligned_cols=263 Identities=25% Similarity=0.345 Sum_probs=204.0
Q ss_pred hcCCcccccccCCCceeEEEEEcCCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccc----ee
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELPTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHAL----HS 775 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----~~ 775 (973)
..+|++.+.||+|+||+||+|++ .++.||||++... ......+..|+.++++++||||+++++++.++. ..
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 97 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQL-LNEYVAVKIFPIQ----DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDL 97 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEE-TTEEEEEEEECGG----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred hhhchhhheecccCceEEEEEEE-CCCEEEEEEeecC----chHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceE
Confidence 46899999999999999999987 4799999998642 223455667899999999999999999997754 46
Q ss_pred EEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCC-------CCCeEeecCCCCCeeecCCCceEEe
Q 002069 776 FVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNC-------FPPIVHRDISSKNVLLNLEYEAHVS 848 (973)
Q Consensus 776 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~-------~~~i~H~Dlk~~Nill~~~~~~kl~ 848 (973)
++||||+++|+|.++++.. .+++.+++.++.|++.|++|||+.. .++|+||||||+||+++.++.+||+
T Consensus 98 ~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~ 173 (322)
T 3soc_A 98 WLITAFHEKGSLSDFLKAN----VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIA 173 (322)
T ss_dssp EEEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEEC
T ss_pred EEEEecCCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEc
Confidence 9999999999999999653 4889999999999999999999861 1279999999999999999999999
Q ss_pred cccccccccCCCC--cccccccccCcccccccccC-----CCCCccchHHHHHHHHHHHhCCCCCcchhhh-----hhhh
Q 002069 849 DFGISKFLKLGLS--NRTELAGTFGYIAPELAYTM-----KVTEKCDVYSFGVLALEVIKGKHPRDFISSI-----CSSL 916 (973)
Q Consensus 849 Dfg~a~~~~~~~~--~~~~~~g~~~y~aPE~~~~~-----~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~-----~~~~ 916 (973)
|||.++....... ......||+.|+|||++.+. .++.++|||||||++|||+||+.||...... ....
T Consensus 174 DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 253 (322)
T 3soc_A 174 DFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEI 253 (322)
T ss_dssp CCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHH
T ss_pred cCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhh
Confidence 9999987654432 23346799999999998863 4566889999999999999999999743211 0000
Q ss_pred --hhhhhhh----hhhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 917 --SSNLNIA----LDEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 917 --~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
....... ......+.++..+. ....+..+.+++.+||+.||++|||+++|++.|+
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~ 314 (322)
T 3soc_A 254 GQHPSLEDMQEVVVHKKKRPVLRDYWQ-KHAGMAMLCETIEECWDHDAEARLSAGCVGERIT 314 (322)
T ss_dssp CSSCCHHHHHHHHTTSCCCCCCCGGGG-SSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ccCCchhhhhhhhhcccCCCCcccccc-ccchHHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 0001111 11112222222211 2234566899999999999999999999999885
No 80
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=8.5e-40 Score=367.72 Aligned_cols=254 Identities=23% Similarity=0.364 Sum_probs=206.7
Q ss_pred hcCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVV 778 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 778 (973)
.++|++.+.||+|+||+||+|.+. +++.||||+++... .....+.|.+|+.++++++||||+++++++..++..++|
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 190 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETL--PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIV 190 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTS--CHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccC--CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEE
Confidence 467999999999999999999775 78999999987542 223356789999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccC
Q 002069 779 YEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKL 858 (973)
Q Consensus 779 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 858 (973)
|||+++|+|.++++... ..+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 191 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~ 265 (377)
T 3cbl_A 191 MELVQGGDFLTFLRTEG--ARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEAD 265 (377)
T ss_dssp EECCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTT
T ss_pred EEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCC
Confidence 99999999999997433 4588999999999999999999999 999999999999999999999999999986543
Q ss_pred CCCcc--cccccccCcccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCC
Q 002069 859 GLSNR--TELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSICSSLSSNLNIALDEMLDPRLPTP 935 (973)
Q Consensus 859 ~~~~~--~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 935 (973)
..... ....+++.|+|||.+.+..++.++|||||||++|||+| |+.||....... .............+.
T Consensus 266 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~------~~~~~~~~~~~~~~~- 338 (377)
T 3cbl_A 266 GVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ------TREFVEKGGRLPCPE- 338 (377)
T ss_dssp SEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHH------HHHHHHTTCCCCCCT-
T ss_pred CceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH------HHHHHHcCCCCCCCC-
Confidence 32111 12335778999999998889999999999999999998 999997543211 011111111111111
Q ss_pred chhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 936 LRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 936 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
..+..+.+++.+||+.||++|||++++++.|+
T Consensus 339 -----~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~ 370 (377)
T 3cbl_A 339 -----LCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQ 370 (377)
T ss_dssp -----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -----CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence 12345788999999999999999999999875
No 81
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.7e-39 Score=364.04 Aligned_cols=254 Identities=25% Similarity=0.429 Sum_probs=195.4
Q ss_pred hcCCcccccccCCCceeEEEEEcC----CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeecccee
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELP----TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHS 775 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 775 (973)
..+|++.+.||+|+||.||+|+.. ++..||||+++... .....++|.+|+.++++++||||+++++++.+.+..
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 121 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY--TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV 121 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCce
Confidence 357999999999999999999764 57789999997643 233467899999999999999999999999999999
Q ss_pred EEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEeccccccc
Q 002069 776 FVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKF 855 (973)
Q Consensus 776 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~ 855 (973)
++||||+++++|.++++... ..+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 122 ~lv~e~~~~~sL~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 196 (373)
T 2qol_A 122 MIVTEYMENGSLDSFLRKHD--AQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRV 196 (373)
T ss_dssp EEEEECCTTCBHHHHHHTTT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred EEEEeCCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccccc
Confidence 99999999999999997543 4689999999999999999999999 999999999999999999999999999987
Q ss_pred ccCCCCc---ccccccccCcccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcchhhhhhhhhhhhhhhhhhhcCCC
Q 002069 856 LKLGLSN---RTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSICSSLSSNLNIALDEMLDPR 931 (973)
Q Consensus 856 ~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (973)
....... .....+++.|+|||++.+..++.++|||||||++|||++ |+.||....... ............
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~------~~~~i~~~~~~~ 270 (373)
T 2qol_A 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD------VIKAVDEGYRLP 270 (373)
T ss_dssp -----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHH------HHHHHHTTEECC
T ss_pred cccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH------HHHHHHcCCCCC
Confidence 7543221 122345778999999999999999999999999999998 999986433210 001111111111
Q ss_pred CCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 932 LPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 932 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
.+. ..+..+.+++.+||+.||.+||++++|++.|+
T Consensus 271 ~~~------~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~ 305 (373)
T 2qol_A 271 PPM------DCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305 (373)
T ss_dssp CCT------TCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCc------cccHHHHHHHHHHhCcChhhCcCHHHHHHHHH
Confidence 111 22345789999999999999999999999874
No 82
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=2.1e-39 Score=350.91 Aligned_cols=263 Identities=22% Similarity=0.323 Sum_probs=200.5
Q ss_pred cCCcccccccCCCceeEEEEEcCCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEEEE
Q 002069 701 KNFDDEHCIGNGGQGSVYKAELPTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVVYE 780 (973)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 780 (973)
++|++.+.||+|+||+||+|...+++.||+|++...... ....+.+.+|+.++++++||||+++++++..++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKED-EGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFE 80 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGG-GCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccc-cccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEE
Confidence 579999999999999999998888999999999754322 2224678899999999999999999999999999999999
Q ss_pred ecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccCCC
Q 002069 781 YLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKLGL 860 (973)
Q Consensus 781 ~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 860 (973)
|+++ +|.+++.... ..+++.++..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||.++......
T Consensus 81 ~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (288)
T 1ob3_A 81 HLDQ-DLKKLLDVCE--GGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPV 154 (288)
T ss_dssp CCSE-EHHHHHHTST--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--
T ss_pred ecCC-CHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCccc
Confidence 9985 8998886543 4588999999999999999999999 99999999999999999999999999998765443
Q ss_pred CcccccccccCcccccccccC-CCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhh------hhhhhh---hhh--hhc
Q 002069 861 SNRTELAGTFGYIAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSL------SSNLNI---ALD--EML 928 (973)
Q Consensus 861 ~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~------~~~~~~---~~~--~~~ 928 (973)
.......||+.|+|||++.+. .++.++||||+||++|||++|+.||.......... ...... ... ...
T Consensus 155 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T 1ob3_A 155 RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKY 234 (288)
T ss_dssp -------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhccccc
Confidence 444556789999999998764 58999999999999999999999997543211100 000000 000 000
Q ss_pred CCCCC----CCch-hhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 929 DPRLP----TPLR-NVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 929 ~~~~~----~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
++.+. ..+. ........+.+++.+||+.||.+|||++|+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp CTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 11110 0000 001123457789999999999999999999864
No 83
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=2.8e-39 Score=352.71 Aligned_cols=258 Identities=24% Similarity=0.402 Sum_probs=198.8
Q ss_pred hcCCcccccccCCCceeEEEEEcCCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhc--CCCCceeeeceeeec----cc
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELPTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTK--IRHRNIVKFYGFCSH----AL 773 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~----~~ 773 (973)
.++|++.+.||+|+||+||+|.. +++.||||++... ....+..|.+++.. ++||||+++++++.. ..
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~------~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~ 79 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR------DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSST 79 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG------GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc------cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCc
Confidence 46899999999999999999987 7899999998632 23555566666555 799999999998654 34
Q ss_pred eeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHh--------hCCCCCeEeecCCCCCeeecCCCce
Q 002069 774 HSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMH--------TNCFPPIVHRDISSKNVLLNLEYEA 845 (973)
Q Consensus 774 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH--------~~~~~~i~H~Dlk~~Nill~~~~~~ 845 (973)
..++||||+++|+|.++++.. .+++..++.++.|++.|++||| +. +|+||||||+||+++.++.+
T Consensus 80 ~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~ 152 (301)
T 3q4u_A 80 QLWLITHYHEMGSLYDYLQLT----TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQC 152 (301)
T ss_dssp EEEEEECCCTTCBHHHHHTTC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCE
T ss_pred eeEEehhhccCCCHHHHHhhc----ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCE
Confidence 679999999999999999643 5889999999999999999999 77 99999999999999999999
Q ss_pred EEecccccccccCCCCc----ccccccccCcccccccccC------CCCCccchHHHHHHHHHHHhC----------CCC
Q 002069 846 HVSDFGISKFLKLGLSN----RTELAGTFGYIAPELAYTM------KVTEKCDVYSFGVLALEVIKG----------KHP 905 (973)
Q Consensus 846 kl~Dfg~a~~~~~~~~~----~~~~~g~~~y~aPE~~~~~------~~~~~~Dv~slG~~l~el~tg----------~~p 905 (973)
||+|||+++........ .....||+.|+|||++.+. .++.++|||||||++|||+|| +.|
T Consensus 153 kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~p 232 (301)
T 3q4u_A 153 CIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPP 232 (301)
T ss_dssp EECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred EEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccccc
Confidence 99999999876544322 2334799999999999876 455789999999999999999 777
Q ss_pred CcchhhhhhhhhhhhhhhhhhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 906 RDFISSICSSLSSNLNIALDEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
|.......................+..+... ........+.+++.+||+.||++|||+++|++.|+
T Consensus 233 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~ 298 (301)
T 3q4u_A 233 FYDVVPNDPSFEDMRKVVCVDQQRPNIPNRW-FSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLT 298 (301)
T ss_dssp TTTTSCSSCCHHHHHHHHTTSCCCCCCCGGG-GGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHH
T ss_pred ccccCCCCcchhhhhHHHhccCCCCCCChhh-ccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHh
Confidence 7532211111111001111111222222211 12345677899999999999999999999999885
No 84
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=1.1e-38 Score=347.94 Aligned_cols=257 Identities=24% Similarity=0.366 Sum_probs=201.0
Q ss_pred hcCCcccccccCCCceeEEEEEcCCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELPTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVVY 779 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 779 (973)
..+|++.+.||+|+||+||+|... ..||+|+++.... .....+.+.+|+.++++++||||+++++++.. +..++||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~lv~ 110 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDP-TPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVT 110 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCC-CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-CcEEEEE
Confidence 468999999999999999999864 4699999876433 33446789999999999999999999998764 4578999
Q ss_pred EecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccCC
Q 002069 780 EYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKLG 859 (973)
Q Consensus 780 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 859 (973)
||+++++|.+++.... ..+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 111 e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~ 185 (307)
T 3lb7_A 111 QWCEGSSLYKHLHVQE--TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp ECCSSCBHHHHHHTSC--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC----
T ss_pred ecCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceecccc
Confidence 9999999999996543 4689999999999999999999999 9999999999999999999999999999865432
Q ss_pred --CCcccccccccCcccccccc---cCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCC
Q 002069 860 --LSNRTELAGTFGYIAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLPT 934 (973)
Q Consensus 860 --~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 934 (973)
........||+.|+|||++. +..++.++|||||||++|||++|+.||.......... .........+....
T Consensus 186 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~----~~~~~~~~~~~~~~ 261 (307)
T 3lb7_A 186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQII----FMVGRGYASPDLSK 261 (307)
T ss_dssp --------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHH----HHHHHTCCCCCSTT
T ss_pred cccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHH----HHHhcCCCCcchhh
Confidence 22334467999999999986 5668889999999999999999999997443211110 01111112222221
Q ss_pred CchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 935 PLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 935 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
... ..+..+.+++.+||+.||++||++.++++.|+
T Consensus 262 ~~~---~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~ 296 (307)
T 3lb7_A 262 LYK---NCPKAMKRLVADCVKKVKEERPLFPQILSSIE 296 (307)
T ss_dssp SCS---SSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHH
T ss_pred hhc---CCcHHHHHHHHHHhhCChhhCcCHHHHHHHHH
Confidence 111 22345788999999999999999999999875
No 85
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=8.5e-39 Score=367.36 Aligned_cols=368 Identities=21% Similarity=0.238 Sum_probs=245.9
Q ss_pred CCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCcccCCccccCccccceeeccCCcCCCCC
Q 002069 33 KNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSLSDLRLSNNSLNGSI 112 (973)
Q Consensus 33 ~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~ 112 (973)
.+...+..+..++.+++|++|++++|.+++ +| +++.+++|++|++++|++++ +| ++.+++|++|++++|++++ +
T Consensus 27 ~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~-~ 100 (457)
T 3bz5_A 27 AFEMQATDTISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTN-L 100 (457)
T ss_dssp HTTCCTTSEEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSC-C
T ss_pred hcCcCcccccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCce-e
Confidence 334444455678888999999999999884 56 68889999999999999884 54 8888899999999999885 4
Q ss_pred CCccccCCccceeecccccccccCcccccccCCCCceecccCCCCCCCCccccCccccceeeecccccCCCCCccccccC
Q 002069 113 PSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSGAIPFSLGNLTNLVTLYIGINALSGSIPNEIGNLK 192 (973)
Q Consensus 113 p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~ 192 (973)
| ++++++|++|++++|++++ +| ++++++|++|++++|++++. + ++.+++|+.|++++|+..+.+ .+..++
T Consensus 101 ~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~ 170 (457)
T 3bz5_A 101 D--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQT 170 (457)
T ss_dssp C--CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCT
T ss_pred e--cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCC
Confidence 4 8888999999999998885 44 88888899999999988864 3 778888888888888554444 477888
Q ss_pred ccceeeccccccccccccccCCCCcccEEecCCcccCCCCCccccccccccceecccccccCCCCcccCCcchhhhccCC
Q 002069 193 SLSDLRLDYNTLSGSILYSFGNLTKLEILYLDVNALSGLIPNEIGNLKSLLALQLNYNTLSGSIPCSFGNLTKLVISCLG 272 (973)
Q Consensus 193 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~ 272 (973)
+|++|++++|++++++ ++.+++|+.|++++|+++++ .++.+++|+.|++++|+++++ | ++
T Consensus 171 ~L~~L~ls~n~l~~l~---l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~i-p--~~----------- 230 (457)
T 3bz5_A 171 QLTTLDCSFNKITELD---VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTEI-D--VT----------- 230 (457)
T ss_dssp TCCEEECCSSCCCCCC---CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSCC-C--CT-----------
T ss_pred cCCEEECCCCccceec---cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCccccc-C--cc-----------
Confidence 8888888888888754 77788888888888888876 377788888888888888753 2 44
Q ss_pred CcccCchhhhhhccccccceEEcccccccCCcCchhhcCCccceeeccccccCCCCCccccCCCCCCcEEcCCCCCCCcc
Q 002069 273 TNALSSSILEEIGNLKSLLHLQLNYNTLSGSIPLSLGSLTNLATLYFSTNALSGSIPNEITNLRSLSDLQLSENTLNGSI 352 (973)
Q Consensus 273 ~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 352 (973)
.+++|+.|++++|++++.. ++.+++|+.|++++| +|+.|++++|.+.+.+
T Consensus 231 -------------~l~~L~~L~l~~N~l~~~~---~~~l~~L~~L~l~~n--------------~L~~L~l~~n~~~~~~ 280 (457)
T 3bz5_A 231 -------------PLTQLTYFDCSVNPLTELD---VSTLSKLTTLHCIQT--------------DLLEIDLTHNTQLIYF 280 (457)
T ss_dssp -------------TCTTCSEEECCSSCCSCCC---CTTCTTCCEEECTTC--------------CCSCCCCTTCTTCCEE
T ss_pred -------------ccCCCCEEEeeCCcCCCcC---HHHCCCCCEEeccCC--------------CCCEEECCCCccCCcc
Confidence 4455556666666665432 234455555555443 2344555555554444
Q ss_pred hhccCCCCCCcEEEccCCcccCCCCcccccccccchhcccccccccCCCcccCCCCCCCEEEccCCCCCCCcchhhhhhc
Q 002069 353 PLALGNLTKLVSLDLSINKLSGSIPLSFASLTSLTTLYLYENSLCDSIPKEIGDMKSLSILDLSSNKLNGSIPLSLANLT 432 (973)
Q Consensus 353 ~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 432 (973)
| ++.+++|+.|++++|...+..|. ...+|+.|++++| ++|++|++++|++++ ++ +..+.
T Consensus 281 ~--~~~l~~L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~~-------------~~L~~L~L~~N~l~~-l~--l~~l~ 339 (457)
T 3bz5_A 281 Q--AEGCRKIKELDVTHNTQLYLLDC---QAAGITELDLSQN-------------PKLVYLYLNNTELTE-LD--VSHNT 339 (457)
T ss_dssp E--CTTCTTCCCCCCTTCTTCCEEEC---TTCCCSCCCCTTC-------------TTCCEEECTTCCCSC-CC--CTTCT
T ss_pred c--ccccccCCEEECCCCcccceecc---CCCcceEechhhc-------------ccCCEEECCCCcccc-cc--cccCC
Confidence 4 34555666666666655444442 2233444433333 455666666666654 22 33332
Q ss_pred ccceEEEeeCcccccccCCCCCCCcccceeeccCCccCCCCCcccccccccccccccccccccccCccc
Q 002069 433 NSLKVLYLSSNHIVGEIPLGHGKFSSLIQLILNNNELSGQLSPELGSLNQLEYLDLSANTFHNSIPESL 501 (973)
Q Consensus 433 ~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~i~~~~~~~l 501 (973)
+|+.|++++|++++ ++.|..|++++|.+.|. ..+..|..+++++|+++|.+|..+
T Consensus 340 -~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~~ 394 (457)
T 3bz5_A 340 -KLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSPDL 394 (457)
T ss_dssp -TCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCTTC
T ss_pred -cCcEEECCCCCCCC--------ccccccccccCCcEEec-----ceeeecCccccccCcEEEEcChhH
Confidence 56666666666553 23455556666666543 244556666666666666665543
No 86
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=5.2e-39 Score=348.71 Aligned_cols=263 Identities=19% Similarity=0.283 Sum_probs=202.3
Q ss_pred cCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEEE
Q 002069 701 KNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVVY 779 (973)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 779 (973)
++|++.+.||+|+||+||+|.. .+++.||||++...... ......+.+|+.++++++||||+++++++.+++..++||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDD-EGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF 80 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSS-TTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCc-CCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEE
Confidence 5799999999999999999965 47899999999765433 233578889999999999999999999999999999999
Q ss_pred EecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccCC
Q 002069 780 EYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKLG 859 (973)
Q Consensus 780 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 859 (973)
||+++ ++.+++.... ..+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.++.....
T Consensus 81 e~~~~-~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 154 (292)
T 3o0g_A 81 EFCDQ-DLKKYFDSCN--GDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIP 154 (292)
T ss_dssp ECCSE-EHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSC
T ss_pred ecCCC-CHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCc
Confidence 99986 5555554322 4689999999999999999999999 9999999999999999999999999999887655
Q ss_pred CCcccccccccCcccccccccCC-CCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhh-------hhh---hhhhc
Q 002069 860 LSNRTELAGTFGYIAPELAYTMK-VTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNL-------NIA---LDEML 928 (973)
Q Consensus 860 ~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~-------~~~---~~~~~ 928 (973)
........||+.|+|||++.+.. ++.++||||+||++|||++|..||.............. ... .....
T Consensus 155 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 234 (292)
T 3o0g_A 155 VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLP 234 (292)
T ss_dssp CSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGST
T ss_pred cccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccc
Confidence 55556678999999999988766 79999999999999999998888532211111000000 000 00000
Q ss_pred C-------CCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 929 D-------PRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 929 ~-------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
+ +...............+.+++.+|++.||++|||++|+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 235 DYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp TCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0 00000000111233457799999999999999999999874
No 87
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=3.9e-39 Score=352.39 Aligned_cols=249 Identities=23% Similarity=0.347 Sum_probs=204.4
Q ss_pred hcCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVV 778 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 778 (973)
.++|++.+.||+|+||.||+|+.. +|+.||+|++...........+.+.+|..+++.++||||+++++++.+....++|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 367999999999999999999654 7999999998643222222356788999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccC
Q 002069 779 YEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKL 858 (973)
Q Consensus 779 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 858 (973)
|||+++|+|.+++... ..+++..++.++.||+.|++|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 85 ~e~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~ 158 (318)
T 1fot_A 85 MDYIEGGELFSLLRKS---QRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPD 158 (318)
T ss_dssp ECCCCSCBHHHHHHHT---SSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSS
T ss_pred EeCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCC
Confidence 9999999999999754 3588999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCCchh
Q 002069 859 GLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLPTPLRN 938 (973)
Q Consensus 859 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 938 (973)
......||+.|+|||++.+..++.++||||+||++|||++|+.||........ ....... ...++..
T Consensus 159 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-----~~~i~~~--~~~~p~~--- 225 (318)
T 1fot_A 159 ---VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKT-----YEKILNA--ELRFPPF--- 225 (318)
T ss_dssp ---CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH-----HHHHHHC--CCCCCTT---
T ss_pred ---ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHH-----HHHHHhC--CCCCCCC---
Confidence 23356799999999999999999999999999999999999999974332110 0111111 1122221
Q ss_pred hHHHHHHHHHHHhcccCCCCCCCC-----CHHHHHHH
Q 002069 939 VQDKLISIMEVSISCLDESPTSRP-----TMQKVSQL 970 (973)
Q Consensus 939 ~~~~~~~l~~li~~cl~~dP~~RP-----s~~ev~~~ 970 (973)
....+.+++.+|++.||.+|| +++++++.
T Consensus 226 ---~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 226 ---FNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp ---SCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred ---CCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 123577899999999999999 88888753
No 88
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.7e-39 Score=352.00 Aligned_cols=253 Identities=21% Similarity=0.287 Sum_probs=198.0
Q ss_pred hcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcc-----------------------hhhHHHHHHHHHHhh
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGE-----------------------MACQQEFLNEGNALT 755 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~-----------------------~~~~~~~~~e~~~l~ 755 (973)
.++|++.+.||+|+||.||+|.. .+++.||||++....... ....+.+.+|+.+++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 46899999999999999999965 578999999987543211 112356889999999
Q ss_pred cCCCCceeeeceeeec--cceeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCC
Q 002069 756 KIRHRNIVKFYGFCSH--ALHSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDIS 833 (973)
Q Consensus 756 ~l~h~niv~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk 833 (973)
+++||||+++++++.+ ....++||||+++++|.++... ..+++.+++.++.|++.|++|||+. +|+|||||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlk 164 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL----KPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIK 164 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCC
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCC
Confidence 9999999999999976 5678999999999999886542 3689999999999999999999999 99999999
Q ss_pred CCCeeecCCCceEEecccccccccCCCCcccccccccCcccccccccCC---CCCccchHHHHHHHHHHHhCCCCCcchh
Q 002069 834 SKNVLLNLEYEAHVSDFGISKFLKLGLSNRTELAGTFGYIAPELAYTMK---VTEKCDVYSFGVLALEVIKGKHPRDFIS 910 (973)
Q Consensus 834 ~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~---~~~~~Dv~slG~~l~el~tg~~p~~~~~ 910 (973)
|+||+++.++.+||+|||+++.............||+.|+|||.+.+.. ++.++|||||||++|||++|+.||....
T Consensus 165 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 244 (298)
T 2zv2_A 165 PSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER 244 (298)
T ss_dssp GGGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred HHHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc
Confidence 9999999999999999999987765544445568999999999987665 3678999999999999999999997433
Q ss_pred hhhhhhhhhhhhhhhhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 911 SICSSLSSNLNIALDEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
... . ........ ...+.. ...+..+.+++.+||+.||.+|||++|+++.
T Consensus 245 ~~~--~---~~~~~~~~--~~~~~~----~~~~~~l~~li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 245 IMC--L---HSKIKSQA--LEFPDQ----PDIAEDLKDLITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp HHH--H---HHHHHHCC--CCCCSS----SCCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred HHH--H---HHHHhccc--CCCCCc----cccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence 211 0 00011111 111111 1123457889999999999999999999863
No 89
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=8.4e-40 Score=358.23 Aligned_cols=255 Identities=23% Similarity=0.331 Sum_probs=198.9
Q ss_pred hcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccce----
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALH---- 774 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~---- 774 (973)
.++|++.+.||+|+||+||+|.. .+++.||||++.............+.+|+.++++++||||+++++++.....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 46899999999999999999964 5889999999987655555556789999999999999999999999876543
Q ss_pred eEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccc
Q 002069 775 SFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISK 854 (973)
Q Consensus 775 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~ 854 (973)
.++||||+++++|.++++.. ..+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.++
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~ 164 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTE---GPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIAR 164 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC-
T ss_pred cEEEEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCcc
Confidence 39999999999999999643 3589999999999999999999999 99999999999999999999999999998
Q ss_pred cccCCCC---cccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCC
Q 002069 855 FLKLGLS---NRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPR 931 (973)
Q Consensus 855 ~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (973)
....... ......||+.|+|||++.+..++.++||||||+++|||++|+.||........ ........
T Consensus 165 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~---------~~~~~~~~ 235 (311)
T 3ork_A 165 AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV---------AYQHVRED 235 (311)
T ss_dssp -----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---------HHHHHHCC
T ss_pred cccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH---------HHHHhcCC
Confidence 7654322 22345689999999999999999999999999999999999999975432111 11111111
Q ss_pred CCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 002069 932 LPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQ 969 (973)
Q Consensus 932 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 969 (973)
...........+..+.+++.+||+.||.+||++.++++
T Consensus 236 ~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~ 273 (311)
T 3ork_A 236 PIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMR 273 (311)
T ss_dssp CCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHH
T ss_pred CCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHH
Confidence 11111111123456789999999999999998777664
No 90
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=5.1e-39 Score=347.20 Aligned_cols=252 Identities=24% Similarity=0.390 Sum_probs=205.2
Q ss_pred hcCCcccccccCCCceeEEEEEcCCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELPTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVVY 779 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 779 (973)
.++|++.+.||+|+||+||+|++.+++.||||++...... .+++.+|+.++++++||||+++++++.++...++||
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 98 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS----EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIIT 98 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBC----HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCC----HHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEE
Confidence 4689999999999999999999888889999999854322 467899999999999999999999999999999999
Q ss_pred EecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccCC
Q 002069 780 EYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKLG 859 (973)
Q Consensus 780 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 859 (973)
||+++++|.+++.... ..+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.++.....
T Consensus 99 e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 173 (283)
T 3gen_A 99 EYMANGCLLNYLREMR--HRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 173 (283)
T ss_dssp CCCTTCBHHHHHHCGG--GCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCH
T ss_pred eccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccccccccccc
Confidence 9999999999997533 4589999999999999999999999 9999999999999999999999999999866432
Q ss_pred C-CcccccccccCcccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCCch
Q 002069 860 L-SNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSICSSLSSNLNIALDEMLDPRLPTPLR 937 (973)
Q Consensus 860 ~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 937 (973)
. .......+|+.|+|||.+.+..++.++||||+|+++|||+| |+.||....... .............+..
T Consensus 174 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~------~~~~~~~~~~~~~~~~-- 245 (283)
T 3gen_A 174 EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE------TAEHIAQGLRLYRPHL-- 245 (283)
T ss_dssp HHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH------HHHHHHTTCCCCCCTT--
T ss_pred ccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhH------HHHHHhcccCCCCCCc--
Confidence 1 12233456788999999998899999999999999999998 999997443211 1111111111111111
Q ss_pred hhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 938 NVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 938 ~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
....+.+++.+||+.||.+|||++++++.|+
T Consensus 246 ----~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~ 276 (283)
T 3gen_A 246 ----ASEKVYTIMYSCWHEKADERPTFKILLSNIL 276 (283)
T ss_dssp ----CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred ----CCHHHHHHHHHHccCChhHCcCHHHHHHHHH
Confidence 1235788999999999999999999999874
No 91
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=3.1e-39 Score=359.45 Aligned_cols=257 Identities=22% Similarity=0.399 Sum_probs=208.3
Q ss_pred HhcCCcccccccCCCceeEEEEEcC------CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeecc
Q 002069 699 ATKNFDDEHCIGNGGQGSVYKAELP------TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHA 772 (973)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 772 (973)
..++|++.+.||+|+||.||+|... +++.||||+++.... ....+.+.+|+.++++++||||+++++++.++
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 122 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS--ADMQADFQREAALMAEFDNPNIVKLLGVCAVG 122 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCC--HHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccC--HHHHHHHHHHHHHHHhCCCCCEEEEEEEEccC
Confidence 4578999999999999999999663 348899999986532 33467899999999999999999999999999
Q ss_pred ceeEEEEEecCCCChHHHhccCcc---------------------ccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeec
Q 002069 773 LHSFVVYEYLEMGSLAMILSNDAA---------------------AEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRD 831 (973)
Q Consensus 773 ~~~~lv~e~~~~~~L~~~l~~~~~---------------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~D 831 (973)
+..++||||+++++|.+++..... ...+++.+++.++.||+.|++|||++ +|+|||
T Consensus 123 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~D 199 (343)
T 1luf_A 123 KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRD 199 (343)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred CceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCC
Confidence 999999999999999999976431 14689999999999999999999999 999999
Q ss_pred CCCCCeeecCCCceEEecccccccccCCC--CcccccccccCcccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcc
Q 002069 832 ISSKNVLLNLEYEAHVSDFGISKFLKLGL--SNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDF 908 (973)
Q Consensus 832 lk~~Nill~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~ 908 (973)
|||+||+++.++.+||+|||.++...... .......+|+.|+|||++.+..++.++||||||+++|||+| |+.||..
T Consensus 200 lkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 279 (343)
T 1luf_A 200 LATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG 279 (343)
T ss_dssp CSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred CCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCC
Confidence 99999999999999999999998664332 22234568899999999998899999999999999999999 9999974
Q ss_pred hhhhhhhhhhhhhhhhhhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 909 ISSICSSLSSNLNIALDEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
.... ................ ..+..+.+++.+||+.||.+|||++++++.|+
T Consensus 280 ~~~~---------~~~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~ 331 (343)
T 1luf_A 280 MAHE---------EVIYYVRDGNILACPE---NCPLELYNLMRLCWSKLPADRPSFCSIHRILQ 331 (343)
T ss_dssp SCHH---------HHHHHHHTTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CChH---------HHHHHHhCCCcCCCCC---CCCHHHHHHHHHHcccCcccCCCHHHHHHHHH
Confidence 3321 1111111111111111 12345788999999999999999999999875
No 92
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=4.2e-39 Score=361.15 Aligned_cols=253 Identities=18% Similarity=0.250 Sum_probs=205.7
Q ss_pred hcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVV 778 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 778 (973)
.+.|++.+.||+|+||+||+|.. .+|+.||+|++.... ......+.+|+.++++++||||+++++++.+....++|
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~---~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 126 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY---PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLI 126 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc---hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEE
Confidence 46799999999999999999965 478999999987542 22356789999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecC--CCceEEecccccccc
Q 002069 779 YEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNL--EYEAHVSDFGISKFL 856 (973)
Q Consensus 779 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~--~~~~kl~Dfg~a~~~ 856 (973)
|||+++++|.+++.... ..+++.+++.++.||+.|++|||+. +|+||||||+||+++. ++.+||+|||+++..
T Consensus 127 ~E~~~gg~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~ 201 (387)
T 1kob_A 127 LEFLSGGELFDRIAAED--YKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKL 201 (387)
T ss_dssp EECCCCCBHHHHTTCTT--CCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEEC
T ss_pred EEcCCCCcHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceec
Confidence 99999999999986543 3588999999999999999999999 9999999999999974 478999999999877
Q ss_pred cCCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCCc
Q 002069 857 KLGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLPTPL 936 (973)
Q Consensus 857 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (973)
... .......||+.|+|||++.+..++.++||||+||++|||++|+.||........ ...+.........
T Consensus 202 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~---------~~~i~~~~~~~~~ 271 (387)
T 1kob_A 202 NPD-EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLET---------LQNVKRCDWEFDE 271 (387)
T ss_dssp CTT-SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH---------HHHHHHCCCCCCS
T ss_pred CCC-cceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHH---------HHHHHhCCCCCCc
Confidence 544 233445799999999999999999999999999999999999999975432110 0111111111111
Q ss_pred hhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 937 RNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 937 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
......+..+.+++.+||+.||.+|||++|+++.
T Consensus 272 ~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 272 DAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp STTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred cccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 1111223457899999999999999999999874
No 93
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1.1e-39 Score=360.16 Aligned_cols=253 Identities=23% Similarity=0.309 Sum_probs=204.6
Q ss_pred HHhcCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcC-CCCceeeeceeeecccee
Q 002069 698 RATKNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKI-RHRNIVKFYGFCSHALHS 775 (973)
Q Consensus 698 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 775 (973)
...++|++.+.||+|+||.||+|+.. +|+.||||+++..........+.+..|..++..+ +||||+++++++.+.+..
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 44678999999999999999999764 7899999998643211122346678888888876 999999999999999999
Q ss_pred EEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEeccccccc
Q 002069 776 FVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKF 855 (973)
Q Consensus 776 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~ 855 (973)
|+||||+++|+|.+++... ..+++.++..++.||+.|++|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 94 ~lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~ 167 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQSC---HKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKE 167 (345)
T ss_dssp EEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhhh
Confidence 9999999999999999653 3589999999999999999999999 999999999999999999999999999986
Q ss_pred ccCCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCC
Q 002069 856 LKLGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLPTP 935 (973)
Q Consensus 856 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 935 (973)
............||+.|+|||++.+..++.++||||+||++|||++|+.||........ ...... ..+.++..
T Consensus 168 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~-----~~~i~~--~~~~~p~~ 240 (345)
T 1xjd_A 168 NMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEEL-----FHSIRM--DNPFYPRW 240 (345)
T ss_dssp CCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-----HHHHHH--CCCCCCTT
T ss_pred cccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHH-----HHHHHh--CCCCCCcc
Confidence 55444445567899999999999999999999999999999999999999974432100 000100 11222221
Q ss_pred chhhHHHHHHHHHHHhcccCCCCCCCCCHH-HHHH
Q 002069 936 LRNVQDKLISIMEVSISCLDESPTSRPTMQ-KVSQ 969 (973)
Q Consensus 936 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-ev~~ 969 (973)
....+.+++.+||+.||.+||++. ++.+
T Consensus 241 ------~s~~~~~li~~lL~~dp~~R~~~~~~i~~ 269 (345)
T 1xjd_A 241 ------LEKEAKDLLVKLFVREPEKRLGVRGDIRQ 269 (345)
T ss_dssp ------SCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred ------cCHHHHHHHHHHhcCCHhHcCCChHHHHc
Confidence 223577899999999999999997 6654
No 94
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.6e-39 Score=350.11 Aligned_cols=253 Identities=24% Similarity=0.387 Sum_probs=184.8
Q ss_pred hcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVV 778 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 778 (973)
.++|++.+.||+|+||.||+|.. .+++.||||++...........+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 46799999999999999999965 58999999998643222222347789999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccC
Q 002069 779 YEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKL 858 (973)
Q Consensus 779 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 858 (973)
|||+++++|.+++.... ..+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+.....
T Consensus 90 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 164 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNRV--KPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKM 164 (278)
T ss_dssp EECCTTEEHHHHHHTCS--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred EecCCCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeeccC
Confidence 99999999999997543 4689999999999999999999999 999999999999999999999999999987764
Q ss_pred CCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCCchh
Q 002069 859 GLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLPTPLRN 938 (973)
Q Consensus 859 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 938 (973)
.........|++.|+|||.+.+..++.++||||+|+++|||++|+.||...... .............+
T Consensus 165 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---------~~~~~~~~~~~~~~--- 232 (278)
T 3cok_A 165 PHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVK---------NTLNKVVLADYEMP--- 232 (278)
T ss_dssp ---------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC--------------CCSSCCCCC---
T ss_pred CCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHH---------HHHHHHhhcccCCc---
Confidence 434444567899999999999888999999999999999999999999743211 11111111111111
Q ss_pred hHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 939 VQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 939 ~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
...+..+.+++.+||+.||++|||++++++.
T Consensus 233 -~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 233 -SFLSIEAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp -TTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred -cccCHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 1123357789999999999999999999863
No 95
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=3.4e-39 Score=354.90 Aligned_cols=255 Identities=22% Similarity=0.293 Sum_probs=187.1
Q ss_pred CCccc---ccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCC-CCceeeeceeeeccceeE
Q 002069 702 NFDDE---HCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIR-HRNIVKFYGFCSHALHSF 776 (973)
Q Consensus 702 ~~~~~---~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~ 776 (973)
+|++. +.||+|+||+||+|.. .+++.||||++.. .....+.+|+.+++.+. ||||+++++++.++...+
T Consensus 9 ~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~------~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~ 82 (325)
T 3kn6_A 9 HYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISK------RMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTF 82 (325)
T ss_dssp HEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEG------GGHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred ccccccCCCccccCCCeEEEEEEECCCCCEEEEEEECh------hhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEE
Confidence 45543 7899999999999965 4789999999853 22467789999999996 999999999999999999
Q ss_pred EEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCC---ceEEeccccc
Q 002069 777 VVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEY---EAHVSDFGIS 853 (973)
Q Consensus 777 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~---~~kl~Dfg~a 853 (973)
+||||+++++|.+++... ..+++.+++.++.|++.|++|||+. +|+||||||+||+++.++ .+||+|||.+
T Consensus 83 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a 156 (325)
T 3kn6_A 83 LVMELLNGGELFERIKKK---KHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFA 156 (325)
T ss_dssp EEECCCCSCBHHHHHHHC---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTC
T ss_pred EEEEccCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccc
Confidence 999999999999999754 3689999999999999999999999 999999999999998765 8999999999
Q ss_pred ccccCCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCC
Q 002069 854 KFLKLGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLP 933 (973)
Q Consensus 854 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 933 (973)
+.............||+.|+|||++.+..++.++||||+||++|||++|+.||........ .................
T Consensus 157 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~--~~~~~~~~~~i~~~~~~ 234 (325)
T 3kn6_A 157 RLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLT--CTSAVEIMKKIKKGDFS 234 (325)
T ss_dssp EECCC----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC---------CCCHHHHHHHHTTTCCC
T ss_pred eecCCCCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccc--cccHHHHHHHHHcCCCC
Confidence 8776554555567789999999999999999999999999999999999999975432110 01112223333344443
Q ss_pred CCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 934 TPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 934 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
.....+...+..+.+++.+||+.||.+|||++|+++.
T Consensus 235 ~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 235 FEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp CCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred CCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 3333333455678899999999999999999998753
No 96
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=5.7e-40 Score=363.62 Aligned_cols=259 Identities=24% Similarity=0.369 Sum_probs=207.9
Q ss_pred HHhcCCcccccccCCCceeEEEEEcC-CC-----CEEEEEEcCCCCCcchhhHHHHHHHHHHhhcC-CCCceeeeceeee
Q 002069 698 RATKNFDDEHCIGNGGQGSVYKAELP-TG-----EIVAVKKFHSPLPGEMACQQEFLNEGNALTKI-RHRNIVKFYGFCS 770 (973)
Q Consensus 698 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~-----~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~ 770 (973)
...++|++.+.||+|+||+||+|... ++ +.||+|++..... ....+.+.+|+.+++++ +||||+++++++.
T Consensus 43 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 120 (333)
T 2i1m_A 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH--ADEKEALMSELKIMSHLGQHENIVNLLGACT 120 (333)
T ss_dssp CCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCC--HHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred CCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccC--hHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence 34578999999999999999999653 23 4899999976532 23467899999999999 8999999999999
Q ss_pred ccceeEEEEEecCCCChHHHhccCcc-----------ccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeee
Q 002069 771 HALHSFVVYEYLEMGSLAMILSNDAA-----------AEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLL 839 (973)
Q Consensus 771 ~~~~~~lv~e~~~~~~L~~~l~~~~~-----------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill 839 (973)
+++..++||||+++|+|.+++..... ...+++..++.++.|++.|++|||+. +|+||||||+||++
T Consensus 121 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~ 197 (333)
T 2i1m_A 121 HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLL 197 (333)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEE
T ss_pred cCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEE
Confidence 99999999999999999999965431 23578999999999999999999999 99999999999999
Q ss_pred cCCCceEEecccccccccCCCC--cccccccccCcccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcchhhhhhhh
Q 002069 840 NLEYEAHVSDFGISKFLKLGLS--NRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSICSSL 916 (973)
Q Consensus 840 ~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~ 916 (973)
+.++.+||+|||+++....... ......+|+.|+|||.+.+..++.++||||||+++|||+| |..||........
T Consensus 198 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~-- 275 (333)
T 2i1m_A 198 TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK-- 275 (333)
T ss_dssp EGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHH--
T ss_pred CCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHH--
Confidence 9999999999999987654322 1233557889999999998899999999999999999998 9999874321110
Q ss_pred hhhhhhhhhhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 917 SSNLNIALDEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
.............+.. .+..+.+++.+||+.||.+|||++++++.|+
T Consensus 276 ---~~~~~~~~~~~~~~~~------~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~ 322 (333)
T 2i1m_A 276 ---FYKLVKDGYQMAQPAF------APKNIYSIMQACWALEPTHRPTFQQICSFLQ 322 (333)
T ss_dssp ---HHHHHHHTCCCCCCTT------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ---HHHHHhcCCCCCCCCC------CCHHHHHHHHHHhccChhhCcCHHHHHHHHH
Confidence 1111111111111111 1335788999999999999999999999875
No 97
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=3.1e-39 Score=361.54 Aligned_cols=256 Identities=23% Similarity=0.355 Sum_probs=205.5
Q ss_pred hcCCcccccccCCCceeEEEEEcC------CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccc
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELP------TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHAL 773 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 773 (973)
.++|++.+.||+|+||+||+|.+. +++.||||++.... .......+.+|+.++++++||||+++++++.+..
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~ 147 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC--SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL 147 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEeccccc--ChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCC
Confidence 467999999999999999999742 56789999997542 2334567899999999999999999999999999
Q ss_pred eeEEEEEecCCCChHHHhccCc----cccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCC---ceE
Q 002069 774 HSFVVYEYLEMGSLAMILSNDA----AAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEY---EAH 846 (973)
Q Consensus 774 ~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~---~~k 846 (973)
..++||||+++|+|.++++... ....+++.+++.++.|++.|++|||+. +|+||||||+||+++.++ .+|
T Consensus 148 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~k 224 (367)
T 3l9p_A 148 PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAK 224 (367)
T ss_dssp SCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEE
T ss_pred CCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEE
Confidence 9999999999999999996543 224589999999999999999999999 999999999999999555 599
Q ss_pred EecccccccccCCC--CcccccccccCcccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcchhhhhhhhhhhhhhh
Q 002069 847 VSDFGISKFLKLGL--SNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSICSSLSSNLNIA 923 (973)
Q Consensus 847 l~Dfg~a~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~ 923 (973)
|+|||+++...... .......||+.|+|||++.+..++.++|||||||++|||++ |..||...... ..
T Consensus 225 L~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~---------~~ 295 (367)
T 3l9p_A 225 IGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ---------EV 295 (367)
T ss_dssp ECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH---------HH
T ss_pred ECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH---------HH
Confidence 99999998653321 22334567899999999999999999999999999999998 99999744321 11
Q ss_pred hhhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 924 LDEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
.............. ..+..+.+++.+||+.||.+|||+++|++.|+
T Consensus 296 ~~~i~~~~~~~~~~---~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~ 341 (367)
T 3l9p_A 296 LEFVTSGGRMDPPK---NCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 341 (367)
T ss_dssp HHHHHTTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHcCCCCCCCc---cCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 11111111111111 12335788999999999999999999999875
No 98
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=5.5e-39 Score=358.76 Aligned_cols=251 Identities=24% Similarity=0.318 Sum_probs=203.8
Q ss_pred hcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVV 778 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 778 (973)
.++|++.+.||+|+||.||+|.. .+++.||+|++...........+.+.+|+.+++.++|||||++++++.+.+..++|
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 36799999999999999999965 47899999998643222223357788999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccC
Q 002069 779 YEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKL 858 (973)
Q Consensus 779 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 858 (973)
|||+++|+|.++++.. ..+++..++.++.||+.|++|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 94 ~e~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 167 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQQN---VHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR 167 (384)
T ss_dssp ECCCTTEEHHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccC
Confidence 9999999999999754 3589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCcccccccccCccccccccc---CCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhc--CCCCC
Q 002069 859 GLSNRTELAGTFGYIAPELAYT---MKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEML--DPRLP 933 (973)
Q Consensus 859 ~~~~~~~~~g~~~y~aPE~~~~---~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 933 (973)
. .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... ......... ...++
T Consensus 168 ~-~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~------~~~~~~~~~~~~~~~p 240 (384)
T 4fr4_A 168 E-TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS------SKEIVHTFETTVVTYP 240 (384)
T ss_dssp T-CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSC------HHHHHHHHHHCCCCCC
T ss_pred C-CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCcc------HHHHHHHHhhcccCCC
Confidence 3 34456789999999999864 458899999999999999999999997432110 001111111 11222
Q ss_pred CCchhhHHHHHHHHHHHhcccCCCCCCCCC-HHHHHH
Q 002069 934 TPLRNVQDKLISIMEVSISCLDESPTSRPT-MQKVSQ 969 (973)
Q Consensus 934 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~ev~~ 969 (973)
.. .+..+.+++.+||+.||.+||+ ++++.+
T Consensus 241 ~~------~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 241 SA------WSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp TT------SCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred Cc------CCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 21 2235788999999999999998 777764
No 99
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=3.3e-39 Score=354.70 Aligned_cols=252 Identities=25% Similarity=0.378 Sum_probs=202.5
Q ss_pred hcCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVV 778 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 778 (973)
.++|++.+.||+|+||+||+|... +++.||||++...... ...+.+.+|+.+++.++||||+++++++.+++..++|
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 83 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF 83 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEccccc--chHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 468999999999999999999654 8999999998654322 2246788999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccC
Q 002069 779 YEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKL 858 (973)
Q Consensus 779 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 858 (973)
|||+++++|.++++... .+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.++.+..
T Consensus 84 ~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 157 (323)
T 3tki_A 84 LEYCSGGELFDRIEPDI---GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRY 157 (323)
T ss_dssp EECCTTEEGGGGSBTTT---BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEE
T ss_pred EEcCCCCcHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceecc
Confidence 99999999999986543 589999999999999999999999 999999999999999999999999999987653
Q ss_pred CC--CcccccccccCcccccccccCCC-CCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCC-CCCC
Q 002069 859 GL--SNRTELAGTFGYIAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDP-RLPT 934 (973)
Q Consensus 859 ~~--~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 934 (973)
.. .......||+.|+|||++.+..+ +.++||||+||++|||++|+.||.......... ...... ....
T Consensus 158 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~--------~~~~~~~~~~~ 229 (323)
T 3tki_A 158 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY--------SDWKEKKTYLN 229 (323)
T ss_dssp TTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHH--------HHHHTTCTTST
T ss_pred CCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHH--------HHHhcccccCC
Confidence 32 22345679999999999987775 678999999999999999999997543221111 111111 1111
Q ss_pred CchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 935 PLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 935 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
.. ......+.+++.+||+.||.+|||++|+++.
T Consensus 230 ~~---~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 230 PW---KKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp TG---GGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cc---ccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 11 1223456789999999999999999999864
No 100
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.8e-39 Score=361.23 Aligned_cols=256 Identities=24% Similarity=0.354 Sum_probs=208.6
Q ss_pred hcCCcccccccCCCceeEEEEEc--------CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcC-CCCceeeeceeee
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL--------PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKI-RHRNIVKFYGFCS 770 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~ 770 (973)
.++|++.+.||+|+||+||+|.. ..++.||||++.... .....+.+.+|+++++++ +||||+++++++.
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~ 145 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLLGACT 145 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeecccc--CHHHHHHHHHHHHHHHHhcCCchhhhheeeec
Confidence 46899999999999999999964 234579999997653 233467899999999999 9999999999999
Q ss_pred ccceeEEEEEecCCCChHHHhccCcc-------------ccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCe
Q 002069 771 HALHSFVVYEYLEMGSLAMILSNDAA-------------AEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNV 837 (973)
Q Consensus 771 ~~~~~~lv~e~~~~~~L~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Ni 837 (973)
.++..++||||+++|+|.++++.... ...+++.+++.++.|++.||+|||+. +|+||||||+||
T Consensus 146 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NI 222 (382)
T 3tt0_A 146 QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNV 222 (382)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGE
T ss_pred cCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceE
Confidence 99999999999999999999976542 24589999999999999999999999 999999999999
Q ss_pred eecCCCceEEecccccccccCCCC--cccccccccCcccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcchhhhhh
Q 002069 838 LLNLEYEAHVSDFGISKFLKLGLS--NRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSICS 914 (973)
Q Consensus 838 ll~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~ 914 (973)
+++.++.+||+|||.++....... ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||......
T Consensus 223 ll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~-- 300 (382)
T 3tt0_A 223 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE-- 300 (382)
T ss_dssp EECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--
T ss_pred EEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--
Confidence 999999999999999987654322 2334567889999999999999999999999999999999 99999743311
Q ss_pred hhhhhhhhhhhhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 915 SLSSNLNIALDEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
..............+.. ....+.+++.+||+.||.+|||++||++.|+
T Consensus 301 ----~~~~~~~~~~~~~~~~~------~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 348 (382)
T 3tt0_A 301 ----ELFKLLKEGHRMDKPSN------CTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 348 (382)
T ss_dssp ----HHHHHHHTTCCCCCCSS------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ----HHHHHHHcCCCCCCCcc------CCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 01111111111122211 2335788999999999999999999999875
No 101
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=3.3e-39 Score=357.56 Aligned_cols=252 Identities=20% Similarity=0.268 Sum_probs=204.8
Q ss_pred HhcCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcC-CCCceeeeceeeeccceeE
Q 002069 699 ATKNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKI-RHRNIVKFYGFCSHALHSF 776 (973)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 776 (973)
..++|++.+.||+|+||.||+|+.. +++.||||+++..........+.+..|..++..+ +||+|+++++++.+.+..|
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 3578999999999999999999765 6889999998643221222356788999999988 8999999999999999999
Q ss_pred EEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccc
Q 002069 777 VVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFL 856 (973)
Q Consensus 777 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~ 856 (973)
+||||+++|+|.++++.. ..+++.+++.++.||+.|++|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 98 lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~ 171 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQV---GRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 171 (353)
T ss_dssp EEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCccccc
Confidence 999999999999999643 3589999999999999999999999 9999999999999999999999999999865
Q ss_pred cCCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCCc
Q 002069 857 KLGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLPTPL 936 (973)
Q Consensus 857 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (973)
...........||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+.......+.
T Consensus 172 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~---------~~~~~i~~~~~~~p~ 242 (353)
T 2i0e_A 172 IWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED---------ELFQSIMEHNVAYPK 242 (353)
T ss_dssp CCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH---------HHHHHHHHCCCCCCT
T ss_pred ccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHH---------HHHHHHHhCCCCCCC
Confidence 44444455678999999999999999999999999999999999999999743321 111111111111111
Q ss_pred hhhHHHHHHHHHHHhcccCCCCCCCCC-----HHHHHH
Q 002069 937 RNVQDKLISIMEVSISCLDESPTSRPT-----MQKVSQ 969 (973)
Q Consensus 937 ~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~ev~~ 969 (973)
..+..+.+++.+||+.||.+||+ ++++.+
T Consensus 243 ----~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 243 ----SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp ----TSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred ----CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 12335778999999999999995 577764
No 102
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=5.3e-39 Score=356.14 Aligned_cols=247 Identities=21% Similarity=0.266 Sum_probs=204.9
Q ss_pred hcCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVV 778 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 778 (973)
.++|++.+.||+|+||.||+|+.. +|+.||+|++...........+.+.+|+.+++.++||||+++++++.+....|+|
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 367999999999999999999654 7999999998643222223356788999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccC
Q 002069 779 YEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKL 858 (973)
Q Consensus 779 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 858 (973)
|||+++|+|.+++... ..+++.+++.++.||+.|++|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 120 ~e~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~ 193 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193 (350)
T ss_dssp EECCTTCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EcCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccC
Confidence 9999999999999753 3589999999999999999999999 999999999999999999999999999987653
Q ss_pred CCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCC--CCCCCc
Q 002069 859 GLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDP--RLPTPL 936 (973)
Q Consensus 859 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 936 (973)
. .....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+... .++..
T Consensus 194 ~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~---------~~~~~i~~~~~~~p~~- 260 (350)
T 1rdq_E 194 R---TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI---------QIYEKIVSGKVRFPSH- 260 (350)
T ss_dssp C---BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---------HHHHHHHHCCCCCCTT-
T ss_pred C---cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHH---------HHHHHHHcCCCCCCCC-
Confidence 2 33467999999999999999999999999999999999999999743321 111111111 12221
Q ss_pred hhhHHHHHHHHHHHhcccCCCCCCCCC-----HHHHHHH
Q 002069 937 RNVQDKLISIMEVSISCLDESPTSRPT-----MQKVSQL 970 (973)
Q Consensus 937 ~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~ev~~~ 970 (973)
.+..+.+++.+||+.||.+||+ ++|+++.
T Consensus 261 -----~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 261 -----FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp -----CCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred -----CCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 2335788999999999999998 8888753
No 103
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=8.8e-40 Score=366.27 Aligned_cols=264 Identities=22% Similarity=0.349 Sum_probs=210.0
Q ss_pred HHHHHHHhcCCcccccccCCCceeEEEEEc------CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcC-CCCceeee
Q 002069 693 HEEIIRATKNFDDEHCIGNGGQGSVYKAEL------PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKI-RHRNIVKF 765 (973)
Q Consensus 693 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~ 765 (973)
........++|++.+.||+|+||.||+|++ .+++.||||+++.... ....+.+.+|+.+++++ +||||+++
T Consensus 14 ~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 14 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT--HSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC--HHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred cccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCC--HHHHHHHHHHHHHHHhhcCCcceeee
Confidence 444555678999999999999999999962 3568999999976432 23357899999999999 89999999
Q ss_pred ceeeeccc-eeEEEEEecCCCChHHHhccCcc------------------------------------------------
Q 002069 766 YGFCSHAL-HSFVVYEYLEMGSLAMILSNDAA------------------------------------------------ 796 (973)
Q Consensus 766 ~~~~~~~~-~~~lv~e~~~~~~L~~~l~~~~~------------------------------------------------ 796 (973)
++++.+.+ ..++||||+++|+|.++++....
T Consensus 92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (359)
T 3vhe_A 92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK 171 (359)
T ss_dssp EEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------
T ss_pred eeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccc
Confidence 99997754 48999999999999999976532
Q ss_pred ---------------ccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccCCCC
Q 002069 797 ---------------AEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKLGLS 861 (973)
Q Consensus 797 ---------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 861 (973)
...+++..++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.++.......
T Consensus 172 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 248 (359)
T 3vhe_A 172 SLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 248 (359)
T ss_dssp ------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTT
T ss_pred ccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeeccccc
Confidence 11288999999999999999999999 999999999999999999999999999987644322
Q ss_pred --cccccccccCcccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCCchh
Q 002069 862 --NRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSICSSLSSNLNIALDEMLDPRLPTPLRN 938 (973)
Q Consensus 862 --~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 938 (973)
......||+.|+|||++.+..++.++|||||||++|||+| |+.||....... ..............+..
T Consensus 249 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~--- 320 (359)
T 3vhe_A 249 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-----EFCRRLKEGTRMRAPDY--- 320 (359)
T ss_dssp CEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-----HHHHHHHHTCCCCCCTT---
T ss_pred chhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH-----HHHHHHHcCCCCCCCCC---
Confidence 2334668899999999999999999999999999999998 999997433111 01111111112222211
Q ss_pred hHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 939 VQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 939 ~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
....+.+++.+||+.||.+|||++|++++|+
T Consensus 321 ---~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 351 (359)
T 3vhe_A 321 ---TTPEMYQTMLDCWHGEPSQRPTFSELVEHLG 351 (359)
T ss_dssp ---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ---CCHHHHHHHHHHccCChhhCCCHHHHHHHHH
Confidence 2235788999999999999999999999885
No 104
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=3.3e-40 Score=372.07 Aligned_cols=259 Identities=19% Similarity=0.236 Sum_probs=204.9
Q ss_pred HHHHhcCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccce
Q 002069 696 IIRATKNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALH 774 (973)
Q Consensus 696 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 774 (973)
+....++|++.+.||+|+||+||+|+.. +++.||+|++...........+.+.+|+.+++.++||||+++++++.+++.
T Consensus 64 ~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~ 143 (410)
T 3v8s_A 64 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRY 143 (410)
T ss_dssp HSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred cccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCE
Confidence 3344678999999999999999999664 789999999864211111112457889999999999999999999999999
Q ss_pred eEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccc
Q 002069 775 SFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISK 854 (973)
Q Consensus 775 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~ 854 (973)
.|+||||+++|+|.++++.. .+++..++.++.||+.|++|||+. +|+||||||+||+++.++.+||+|||+|+
T Consensus 144 ~~lV~E~~~gg~L~~~l~~~----~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~a~ 216 (410)
T 3v8s_A 144 LYMVMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCM 216 (410)
T ss_dssp EEEEECCCTTEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEEEeCCCCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccceeE
Confidence 99999999999999999643 478999999999999999999999 99999999999999999999999999998
Q ss_pred cccCCCC-cccccccccCcccccccccCC----CCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcC
Q 002069 855 FLKLGLS-NRTELAGTFGYIAPELAYTMK----VTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLD 929 (973)
Q Consensus 855 ~~~~~~~-~~~~~~g~~~y~aPE~~~~~~----~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 929 (973)
....... ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||........ ..........
T Consensus 217 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~-----~~~i~~~~~~ 291 (410)
T 3v8s_A 217 KMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT-----YSKIMNHKNS 291 (410)
T ss_dssp ECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-----HHHHHTHHHH
T ss_pred eeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhH-----HHHHHhcccc
Confidence 7654422 234568999999999998665 78899999999999999999999974432110 1111111101
Q ss_pred CCCCCCchhhHHHHHHHHHHHhcccCCCCCC--CCCHHHHHHH
Q 002069 930 PRLPTPLRNVQDKLISIMEVSISCLDESPTS--RPTMQKVSQL 970 (973)
Q Consensus 930 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~ev~~~ 970 (973)
..++.. ...+..+.+++.+|++.+|.+ ||+++||+++
T Consensus 292 ~~~p~~----~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 292 LTFPDD----NDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp CCCCTT----CCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred ccCCCc----ccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 111111 012234678999999999999 9999999864
No 105
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=9.1e-39 Score=350.74 Aligned_cols=265 Identities=20% Similarity=0.312 Sum_probs=191.4
Q ss_pred hcCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVV 778 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 778 (973)
..+|++.+.||+|+||+||+|... +|+.||||++...... ...+.+.+|+.++++++||||+++++++..++..++|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 81 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEE--GTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLV 81 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTT--CSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccccc--ccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEE
Confidence 467999999999999999999664 7899999998754322 2246788999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccCc---cccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEeccccccc
Q 002069 779 YEYLEMGSLAMILSNDA---AAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKF 855 (973)
Q Consensus 779 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~ 855 (973)
|||++ ++|.+++.... ....+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.++.
T Consensus 82 ~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~ 157 (317)
T 2pmi_A 82 FEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARA 157 (317)
T ss_dssp EECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEE
T ss_pred EEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCcccee
Confidence 99998 69999886432 123588999999999999999999999 999999999999999999999999999987
Q ss_pred ccCCCCcccccccccCccccccccc-CCCCCccchHHHHHHHHHHHhCCCCCcchhhhhh--hh----hhhhhh---hhh
Q 002069 856 LKLGLSNRTELAGTFGYIAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSICS--SL----SSNLNI---ALD 925 (973)
Q Consensus 856 ~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~--~~----~~~~~~---~~~ 925 (973)
............||+.|+|||++.+ ..++.++||||+||++|||++|+.||........ .. ...... ...
T Consensus 158 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 237 (317)
T 2pmi_A 158 FGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVT 237 (317)
T ss_dssp TTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGG
T ss_pred cCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhh
Confidence 7654444456678999999999876 4689999999999999999999999975432110 00 000000 000
Q ss_pred h--hcCCCC----CCCchh------hHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 926 E--MLDPRL----PTPLRN------VQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 926 ~--~~~~~~----~~~~~~------~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
. ...+.+ +..... .......+.+++.+||+.||.+|||++|+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 238 KLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp GCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 0 000000 000000 00123467899999999999999999999863
No 106
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=9.7e-39 Score=343.37 Aligned_cols=249 Identities=23% Similarity=0.268 Sum_probs=181.2
Q ss_pred cCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEEE
Q 002069 701 KNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVVY 779 (973)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 779 (973)
++|++.+.||+|+||+||+|.. .+++.||+|++...........+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 5799999999999999999965 478999999998655444445678999999999999999999999999999999999
Q ss_pred EecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccCC
Q 002069 780 EYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKLG 859 (973)
Q Consensus 780 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 859 (973)
||+ ++++.+++... ..+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+......
T Consensus 93 e~~-~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 165 (275)
T 2eue_A 93 EYA-GNELFDYIVQR---DKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 165 (275)
T ss_dssp ECC-CEEHHHHHHTS---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC------
T ss_pred hhc-CCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccCc
Confidence 999 67888877654 3589999999999999999999999 9999999999999999999999999999866543
Q ss_pred CCcccccccccCcccccccccCCC-CCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCCchh
Q 002069 860 LSNRTELAGTFGYIAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLPTPLRN 938 (973)
Q Consensus 860 ~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 938 (973)
. ......||+.|+|||.+.+..+ +.++||||+|+++|||++|+.||+....... ....... ...++..
T Consensus 166 ~-~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~------~~~~~~~-~~~~~~~--- 234 (275)
T 2eue_A 166 N-FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVL------FKNISNG-VYTLPKF--- 234 (275)
T ss_dssp ----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHH------HHHHHHT-CCCCCTT---
T ss_pred c-cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHH------HHHHHhC-CCCCCcc---
Confidence 2 2344579999999999987765 6899999999999999999999975432100 0001110 1111211
Q ss_pred hHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 939 VQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 939 ~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
.+..+.+++.+||+.||.+|||++|+++.
T Consensus 235 ---~~~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 235 ---LSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp ---SCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred ---CCHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 22347789999999999999999999863
No 107
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=7.1e-39 Score=348.27 Aligned_cols=262 Identities=23% Similarity=0.357 Sum_probs=202.4
Q ss_pred hcCCcccccccCCCceeEEEEEc-----CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeecc--
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL-----PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHA-- 772 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-- 772 (973)
.++|++.+.||+|+||+||+|++ .+++.||||++... .....+.+.+|+.++++++||||+++++++...
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 85 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR 85 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHH
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC---CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC
Confidence 46899999999999999999973 36889999999753 233457899999999999999999999998553
Q ss_pred ceeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccc
Q 002069 773 LHSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGI 852 (973)
Q Consensus 773 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~ 852 (973)
...++||||+++++|.+++.... ..+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.
T Consensus 86 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~ 160 (295)
T 3ugc_A 86 RNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGL 160 (295)
T ss_dssp TSCEEEEECCTTCBHHHHHHHCG--GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCS
T ss_pred CceEEEEEeCCCCCHHHHHHhcc--cccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCcc
Confidence 45899999999999999997653 3589999999999999999999999 999999999999999999999999999
Q ss_pred cccccCCCC---cccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhh-hhhhhh-----h-hh
Q 002069 853 SKFLKLGLS---NRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSIC-SSLSSN-----L-NI 922 (973)
Q Consensus 853 a~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~-~~~~~~-----~-~~ 922 (973)
++....... ......+++.|+|||.+.+..++.++||||||+++|||+||..||....... ...... . ..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (295)
T 3ugc_A 161 TKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 240 (295)
T ss_dssp CC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHH
T ss_pred cccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHH
Confidence 987654322 2233457788999999999999999999999999999999999987543211 000000 0 01
Q ss_pred hhhhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 923 ALDEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
.............. ...+..+.+++.+||+.||.+|||++|+++.|+
T Consensus 241 ~~~~~~~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~ 287 (295)
T 3ugc_A 241 LIELLKNNGRLPRP---DGCPDEIYMIMTECWNNNVNQRPSFRDLALRVD 287 (295)
T ss_dssp HHHHHHTTCCCCCC---TTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHhccCcCCCC---cCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 11111111111111 122345788999999999999999999999875
No 108
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=8.5e-39 Score=358.04 Aligned_cols=249 Identities=22% Similarity=0.253 Sum_probs=197.5
Q ss_pred cccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEEEEec
Q 002069 704 DDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVVYEYL 782 (973)
Q Consensus 704 ~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 782 (973)
...+.||+|+||.||+|.. .+|+.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus 92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~ 168 (373)
T 2x4f_A 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRG---MKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYV 168 (373)
T ss_dssp EEEEECC-----CEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccc---cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCC
Confidence 3367899999999999965 579999999997542 234578999999999999999999999999999999999999
Q ss_pred CCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeee--cCCCceEEecccccccccCCC
Q 002069 783 EMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLL--NLEYEAHVSDFGISKFLKLGL 860 (973)
Q Consensus 783 ~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill--~~~~~~kl~Dfg~a~~~~~~~ 860 (973)
++++|.+++.... ..+++.+++.++.||+.|++|||+. +|+||||||+||++ +.++.+||+|||+++......
T Consensus 169 ~~~~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~ 243 (373)
T 2x4f_A 169 DGGELFDRIIDES--YNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE 243 (373)
T ss_dssp TTCEEHHHHHHTG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC
T ss_pred CCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc
Confidence 9999999886443 3588999999999999999999999 99999999999999 567899999999998775542
Q ss_pred CcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCCchhhH
Q 002069 861 SNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLPTPLRNVQ 940 (973)
Q Consensus 861 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 940 (973)
......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+.............
T Consensus 244 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~---------~~~~~i~~~~~~~~~~~~~ 313 (373)
T 2x4f_A 244 -KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA---------ETLNNILACRWDLEDEEFQ 313 (373)
T ss_dssp -BCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH---------HHHHHHHHTCCCSCSGGGT
T ss_pred -ccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH---------HHHHHHHhccCCCChhhhc
Confidence 233457999999999999889999999999999999999999999754321 1111111111111111112
Q ss_pred HHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 941 DKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 941 ~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
.....+.+++.+||+.||.+|||++|+++.
T Consensus 314 ~~~~~~~~li~~~L~~dp~~Rps~~e~l~h 343 (373)
T 2x4f_A 314 DISEEAKEFISKLLIKEKSWRISASEALKH 343 (373)
T ss_dssp TSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred cCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 234567899999999999999999999873
No 109
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=1.1e-38 Score=350.91 Aligned_cols=255 Identities=20% Similarity=0.239 Sum_probs=207.7
Q ss_pred hcCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcc---hhhHHHHHHHHHHhhcCCCCceeeeceeeecccee
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGE---MACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHS 775 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 775 (973)
.++|++.+.||+|+||.||+|... +|+.||||++....... ....+.+.+|+.++++++||||+++++++.+....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 467999999999999999999654 78999999987543222 11357899999999999999999999999999999
Q ss_pred EEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCC----ceEEeccc
Q 002069 776 FVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEY----EAHVSDFG 851 (973)
Q Consensus 776 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~----~~kl~Dfg 851 (973)
++||||+++++|.+++... ..+++..++.++.|++.|++|||+. +|+||||||+||+++.++ .+||+|||
T Consensus 91 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg 164 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQK---ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164 (321)
T ss_dssp EEEECCCCSCBHHHHHHTC---SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCT
T ss_pred EEEEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccCc
Confidence 9999999999999999754 3578999999999999999999999 999999999999999887 79999999
Q ss_pred ccccccCCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCC
Q 002069 852 ISKFLKLGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPR 931 (973)
Q Consensus 852 ~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (973)
.++..... .......||+.|+|||++.+..++.++||||||+++|+|++|+.||...... ..........
T Consensus 165 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---------~~~~~i~~~~ 234 (321)
T 2a2a_A 165 LAHEIEDG-VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ---------ETLANITSVS 234 (321)
T ss_dssp TCEECCTT-CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH---------HHHHHHHTTC
T ss_pred cceecCcc-ccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHH---------HHHHHHHhcc
Confidence 99877554 2334567999999999999999999999999999999999999999743321 1111111111
Q ss_pred CCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 932 LPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 932 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
...........+..+.+++.+||+.||.+|||++|+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 235 YDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp CCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred cccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 111111111233457899999999999999999999874
No 110
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=4.2e-39 Score=345.45 Aligned_cols=255 Identities=25% Similarity=0.411 Sum_probs=194.2
Q ss_pred hcCCcccccccCCCceeEEEEEcCCCCEEEEEEcCCCCCcc-hhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELPTGEIVAVKKFHSPLPGE-MACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVV 778 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 778 (973)
.++|++.+.||+|+||.||+|.+ .++.||||++....... ....+.+.+|+.+++.++||||+++++++.+++..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEE-TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 46799999999999999999987 48899999987543222 22357789999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecC--------CCceEEecc
Q 002069 779 YEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNL--------EYEAHVSDF 850 (973)
Q Consensus 779 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~--------~~~~kl~Df 850 (973)
|||+++++|.++++. ..+++.+++.++.|++.|++|||++...+++||||||+||+++. ++.+|++||
T Consensus 85 ~e~~~~~~L~~~~~~----~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Df 160 (271)
T 3dtc_A 85 MEFARGGPLNRVLSG----KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF 160 (271)
T ss_dssp EECCTTEEHHHHHTS----SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCC
T ss_pred EEcCCCCCHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccC
Confidence 999999999999863 35889999999999999999999992222999999999999986 678999999
Q ss_pred cccccccCCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCC
Q 002069 851 GISKFLKLGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDP 930 (973)
Q Consensus 851 g~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 930 (973)
|.++...... .....|++.|+|||.+.+..++.++||||+|+++|+|++|+.||......... ..........
T Consensus 161 g~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~-----~~~~~~~~~~ 233 (271)
T 3dtc_A 161 GLAREWHRTT--KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVA-----YGVAMNKLAL 233 (271)
T ss_dssp CC---------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHH-----HHHHTSCCCC
T ss_pred Cccccccccc--ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-----HhhhcCCCCC
Confidence 9998665432 23457899999999999989999999999999999999999999754321110 0011111111
Q ss_pred CCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 931 RLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 931 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
..+. ..+..+.+++.+||+.||.+|||++|+++.|+
T Consensus 234 ~~~~------~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~ 269 (271)
T 3dtc_A 234 PIPS------TCPEPFAKLMEDCWNPDPHSRPSFTNILDQLT 269 (271)
T ss_dssp CCCT------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCc------ccCHHHHHHHHHHhcCCcccCcCHHHHHHHHh
Confidence 1111 12345788999999999999999999999885
No 111
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=9.2e-39 Score=352.02 Aligned_cols=250 Identities=23% Similarity=0.315 Sum_probs=194.5
Q ss_pred hcCCcccccccCCCceeEEEEEc----CCCCEEEEEEcCCCCCc-chhhHHHHHHHHHHhhcCCCCceeeeceeeeccce
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL----PTGEIVAVKKFHSPLPG-EMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALH 774 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 774 (973)
.++|++.+.||+|+||.||+|+. .+++.||+|+++..... .......+.+|+.++++++||||+++++++...+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 46899999999999999999965 47899999999764321 12234668889999999999999999999999999
Q ss_pred eEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccc
Q 002069 775 SFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISK 854 (973)
Q Consensus 775 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~ 854 (973)
.++||||+++++|.+++... ..+++..+..++.||+.|++|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~ 169 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLERE---GIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCK 169 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC-
T ss_pred EEEEEeCCCCCcHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCccc
Confidence 99999999999999999643 3578999999999999999999999 99999999999999999999999999998
Q ss_pred cccCCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCC--CC
Q 002069 855 FLKLGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDP--RL 932 (973)
Q Consensus 855 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 932 (973)
.............||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+... .+
T Consensus 170 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---------~~~~~i~~~~~~~ 240 (327)
T 3a62_A 170 ESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK---------KTIDKILKCKLNL 240 (327)
T ss_dssp ---------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---------HHHHHHHHTCCCC
T ss_pred ccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHH---------HHHHHHHhCCCCC
Confidence 6554434445567999999999999989999999999999999999999999754321 111111111 12
Q ss_pred CCCchhhHHHHHHHHHHHhcccCCCCCCCC-----CHHHHHHH
Q 002069 933 PTPLRNVQDKLISIMEVSISCLDESPTSRP-----TMQKVSQL 970 (973)
Q Consensus 933 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~ev~~~ 970 (973)
+.. ....+.+++.+||+.||.+|| +++++++.
T Consensus 241 p~~------~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 241 PPY------LTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp CTT------SCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred CCC------CCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 211 223577899999999999999 77787753
No 112
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=7.1e-39 Score=355.97 Aligned_cols=252 Identities=21% Similarity=0.281 Sum_probs=189.9
Q ss_pred HhcCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEE
Q 002069 699 ATKNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFV 777 (973)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 777 (973)
..++|++.+.||+|+||+||+|... +++.||||++.... ..+.+.+|+.++++++||||+++++++.+++..++
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 125 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-----DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISL 125 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC---------------CHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-----hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEE
Confidence 3567999999999999999999665 68899999997542 24678899999999999999999999999999999
Q ss_pred EEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecC---CCceEEecccccc
Q 002069 778 VYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNL---EYEAHVSDFGISK 854 (973)
Q Consensus 778 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~---~~~~kl~Dfg~a~ 854 (973)
||||+++++|.+++.... .+++.+++.++.|++.|++|||+. +|+||||||+||+++. ++.+||+|||+++
T Consensus 126 v~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~ 199 (349)
T 2w4o_A 126 VLELVTGGELFDRIVEKG---YYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSK 199 (349)
T ss_dssp EECCCCSCBHHHHHTTCS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC---
T ss_pred EEEeCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCcccc
Confidence 999999999999997543 589999999999999999999999 9999999999999975 7899999999998
Q ss_pred cccCCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCC
Q 002069 855 FLKLGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLPT 934 (973)
Q Consensus 855 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 934 (973)
..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ............
T Consensus 200 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~--------~~~~i~~~~~~~ 270 (349)
T 2w4o_A 200 IVEHQ-VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQF--------MFRRILNCEYYF 270 (349)
T ss_dssp --------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHH--------HHHHHHTTCCCC
T ss_pred ccCcc-cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHH--------HHHHHHhCCCcc
Confidence 76543 223446799999999999999999999999999999999999999964332110 111111111111
Q ss_pred CchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 935 PLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 935 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
........+..+.+++.+||+.||++|||+.|+++.
T Consensus 271 ~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 271 ISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp CTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111112233457899999999999999999999874
No 113
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=8.7e-39 Score=351.10 Aligned_cols=256 Identities=25% Similarity=0.374 Sum_probs=208.3
Q ss_pred hcCCcccccccCCCceeEEEEEc------CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccc
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL------PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHAL 773 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 773 (973)
.++|.+.+.||+|+||.||+|.. .+++.||||++.... .....+.+.+|+.++++++||||+++++++.+.+
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 99 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA--SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG 99 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC--CHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCC
Confidence 56899999999999999999964 345889999997543 2344678999999999999999999999999999
Q ss_pred eeEEEEEecCCCChHHHhccCcc---------------------ccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecC
Q 002069 774 HSFVVYEYLEMGSLAMILSNDAA---------------------AEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDI 832 (973)
Q Consensus 774 ~~~lv~e~~~~~~L~~~l~~~~~---------------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dl 832 (973)
..++||||+++++|.+++..... ...+++.+++.++.|++.|++|||++ +|+||||
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~di 176 (314)
T 2ivs_A 100 PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDL 176 (314)
T ss_dssp SCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred ceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCccccc
Confidence 99999999999999999976432 23478999999999999999999999 9999999
Q ss_pred CCCCeeecCCCceEEecccccccccCCCC--cccccccccCcccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcch
Q 002069 833 SSKNVLLNLEYEAHVSDFGISKFLKLGLS--NRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFI 909 (973)
Q Consensus 833 k~~Nill~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~ 909 (973)
||+||+++.++.+||+|||.++....... ......+++.|+|||.+.+..++.++||||+|+++|||++ |+.||...
T Consensus 177 kp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 256 (314)
T 2ivs_A 177 AARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 256 (314)
T ss_dssp SGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred chheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999999999999999987654322 2233457889999999998889999999999999999999 99999743
Q ss_pred hhhhhhhhhhhhhhhhhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 910 SSICSSLSSNLNIALDEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
.... .............+. ..+..+.+++.+||+.||.+||+++++++.|+
T Consensus 257 ~~~~------~~~~~~~~~~~~~~~------~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~ 307 (314)
T 2ivs_A 257 PPER------LFNLLKTGHRMERPD------NCSEEMYRLMLQCWKQEPDKRPVFADISKDLE 307 (314)
T ss_dssp CGGG------HHHHHHTTCCCCCCT------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CHHH------HHHHhhcCCcCCCCc------cCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 3210 011111111111111 12345789999999999999999999999875
No 114
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=5.1e-39 Score=358.61 Aligned_cols=245 Identities=23% Similarity=0.269 Sum_probs=193.6
Q ss_pred hcCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHH-hhcCCCCceeeeceeeeccceeEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNA-LTKIRHRNIVKFYGFCSHALHSFV 777 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~-l~~l~h~niv~~~~~~~~~~~~~l 777 (973)
.++|++.+.||+|+||.||+|+.. +++.||||++.............+..|..+ ++.++||||+++++++.+.+..|+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 467999999999999999999664 788999999975543333334566777776 577899999999999999999999
Q ss_pred EEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEeccccccccc
Q 002069 778 VYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLK 857 (973)
Q Consensus 778 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 857 (973)
||||+++|+|.+++++. ..+++..++.++.||+.||+|||++ +|+||||||+||+++.++++||+|||+++...
T Consensus 117 v~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~ 190 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRE---RCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENI 190 (373)
T ss_dssp EEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGB
T ss_pred EEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccccc
Confidence 99999999999999653 3588999999999999999999999 99999999999999999999999999998754
Q ss_pred CCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCC--CCCCC
Q 002069 858 LGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDP--RLPTP 935 (973)
Q Consensus 858 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 935 (973)
..........||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....++.. .++..
T Consensus 191 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~---------~~~~~i~~~~~~~~~~ 261 (373)
T 2r5t_A 191 EHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA---------EMYDNILNKPLQLKPN 261 (373)
T ss_dssp CCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHH---------HHHHHHHHSCCCCCSS
T ss_pred cCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH---------HHHHHHHhcccCCCCC
Confidence 4444555678999999999999999999999999999999999999999743321 111111111 11211
Q ss_pred chhhHHHHHHHHHHHhcccCCCCCCCCCHH
Q 002069 936 LRNVQDKLISIMEVSISCLDESPTSRPTMQ 965 (973)
Q Consensus 936 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 965 (973)
....+.+++.+||+.||.+||++.
T Consensus 262 ------~~~~~~~li~~lL~~dp~~R~~~~ 285 (373)
T 2r5t_A 262 ------ITNSARHLLEGLLQKDRTKRLGAK 285 (373)
T ss_dssp ------SCHHHHHHHHHHTCSSGGGSTTTT
T ss_pred ------CCHHHHHHHHHHcccCHHhCCCCC
Confidence 223467899999999999999985
No 115
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1.1e-38 Score=366.10 Aligned_cols=251 Identities=24% Similarity=0.334 Sum_probs=206.1
Q ss_pred hcCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVV 778 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 778 (973)
.++|.+.+.||+|+||.||+|... +|+.||||++.............+.+|+.+++.++||||+++++++..++..++|
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 367999999999999999999664 8999999998643222222356789999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccC
Q 002069 779 YEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKL 858 (973)
Q Consensus 779 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 858 (973)
|||+++|+|.+++... ..+++.+++.++.||+.|++|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 95 ~E~~~gg~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~ 168 (476)
T 2y94_A 95 MEYVSGGELFDYICKN---GRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 168 (476)
T ss_dssp EECCSSEEHHHHTTSS---SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCT
T ss_pred EeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhccc
Confidence 9999999999999754 3589999999999999999999999 999999999999999999999999999987754
Q ss_pred CCCcccccccccCcccccccccCCC-CCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCCch
Q 002069 859 GLSNRTELAGTFGYIAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLPTPLR 937 (973)
Q Consensus 859 ~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 937 (973)
. .......||+.|+|||++.+..+ +.++||||+||++|||++|+.||+.... ......+.......+.
T Consensus 169 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~---------~~~~~~i~~~~~~~p~- 237 (476)
T 2y94_A 169 G-EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV---------PTLFKKICDGIFYTPQ- 237 (476)
T ss_dssp T-CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS---------HHHHHHHHTTCCCCCT-
T ss_pred c-ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCH---------HHHHHHHhcCCcCCCc-
Confidence 4 23345679999999999988765 6799999999999999999999974331 1111112222211111
Q ss_pred hhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 938 NVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 938 ~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
.....+.+++.+||+.||.+|||++|+++.
T Consensus 238 ---~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 238 ---YLNPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp ---TCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred ---cCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 112347789999999999999999999863
No 116
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=1.1e-38 Score=344.67 Aligned_cols=254 Identities=20% Similarity=0.281 Sum_probs=205.3
Q ss_pred hcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVV 778 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 778 (973)
.++|++.+.||+|+||.||+|.. .+++.||+|++...... ....+.+.+|+.++++++||||+++++++.++...++|
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 83 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS-ARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 83 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCC-HHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEE
Confidence 47899999999999999999965 47899999998754332 23357788999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCc---eEEeccccccc
Q 002069 779 YEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYE---AHVSDFGISKF 855 (973)
Q Consensus 779 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~---~kl~Dfg~a~~ 855 (973)
|||+++++|.+++... ..+++.++..++.|++.|++|||+. +|+||||||+||+++.++. +||+|||.+..
T Consensus 84 ~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~ 157 (284)
T 3kk8_A 84 FDLVTGGELFEDIVAR---EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 157 (284)
T ss_dssp ECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred EecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEE
Confidence 9999999999888643 3589999999999999999999999 9999999999999987655 99999999987
Q ss_pred ccCCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCC
Q 002069 856 LKLGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLPTP 935 (973)
Q Consensus 856 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 935 (973)
.... .......|++.|+|||.+.+..++.++||||+|+++|+|++|+.||....... ............+
T Consensus 158 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~---------~~~~~~~~~~~~~ 227 (284)
T 3kk8_A 158 VNDS-EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR---------LYAQIKAGAYDYP 227 (284)
T ss_dssp CCSS-CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---------HHHHHHHTCCCCC
T ss_pred cccC-ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhH---------HHHHHHhccccCC
Confidence 6543 23345679999999999999999999999999999999999999997433211 0011111111111
Q ss_pred chhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 936 LRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 936 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
.......+..+.+++.+||+.||.+|||++|+++.
T Consensus 228 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 228 SPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp TTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred chhhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 11111223457889999999999999999999864
No 117
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=349.03 Aligned_cols=248 Identities=22% Similarity=0.254 Sum_probs=195.3
Q ss_pred hcCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcC-CCCceeeeceeeeccceeEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKI-RHRNIVKFYGFCSHALHSFV 777 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~l 777 (973)
.++|++.++||+|+||+||+|... +++.||||++......... ...+..|+..+.++ +||||+++++++.+++..++
T Consensus 56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~-~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~l 134 (311)
T 3p1a_A 56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKD-RARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYL 134 (311)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHH-HHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHH-HHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEE
Confidence 367999999999999999999665 8999999998765444333 34455555555544 99999999999999999999
Q ss_pred EEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEeccccccccc
Q 002069 778 VYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLK 857 (973)
Q Consensus 778 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 857 (973)
||||+ +++|.+++.... ..+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 135 v~e~~-~~~L~~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~ 208 (311)
T 3p1a_A 135 QTELC-GPSLQQHCEAWG--ASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELG 208 (311)
T ss_dssp EEECC-CCBHHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC
T ss_pred EEecc-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeecc
Confidence 99999 678988886543 4689999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCCch
Q 002069 858 LGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLPTPLR 937 (973)
Q Consensus 858 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 937 (973)
.. .......||+.|+|||++.+ .++.++|||||||++|||++|..|+...... ........+..
T Consensus 209 ~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~------------~~~~~~~~~~~-- 272 (311)
T 3p1a_A 209 TA-GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGW------------QQLRQGYLPPE-- 272 (311)
T ss_dssp -------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHH------------HHHTTTCCCHH--
T ss_pred cC-CCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHH------------HHHhccCCCcc--
Confidence 43 23344569999999999876 6899999999999999999997765432221 11111111111
Q ss_pred hhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 938 NVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 938 ~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
.....+..+.+++.+||+.||++|||++|+++.
T Consensus 273 ~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 273 FTAGLSSELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cccCCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 111234568899999999999999999999874
No 118
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=1.3e-38 Score=342.69 Aligned_cols=252 Identities=21% Similarity=0.276 Sum_probs=205.7
Q ss_pred HhcCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEE
Q 002069 699 ATKNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFV 777 (973)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 777 (973)
..++|++.+.||+|+||+||+|... +++.||+|++...... ..+.+.+|++++++++||||+++++++.+.+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVE---DVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYL 83 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCS---CHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccc---hHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEE
Confidence 3567999999999999999999654 6789999998754322 25789999999999999999999999999999999
Q ss_pred EEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeee---cCCCceEEecccccc
Q 002069 778 VYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLL---NLEYEAHVSDFGISK 854 (973)
Q Consensus 778 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill---~~~~~~kl~Dfg~a~ 854 (973)
||||+++++|.+++... ..+++.+++.++.|++.|++|||+. +++||||||+||++ +.++.+||+|||.+.
T Consensus 84 v~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~ 157 (277)
T 3f3z_A 84 VMELCTGGELFERVVHK---RVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAA 157 (277)
T ss_dssp EEECCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEeccCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccce
Confidence 99999999999988643 3589999999999999999999999 99999999999999 778999999999998
Q ss_pred cccCCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCC
Q 002069 855 FLKLGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLPT 934 (973)
Q Consensus 855 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 934 (973)
..... .......||+.|+|||.+.+. ++.++||||+|+++|||++|+.||...... .............
T Consensus 158 ~~~~~-~~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---------~~~~~~~~~~~~~ 226 (277)
T 3f3z_A 158 RFKPG-KMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDS---------EVMLKIREGTFTF 226 (277)
T ss_dssp ECCTT-SCBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHH---------HHHHHHHHCCCCC
T ss_pred eccCc-cchhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHH---------HHHHHHHhCCCCC
Confidence 77544 233456799999999998764 899999999999999999999999754321 1111111222222
Q ss_pred CchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 935 PLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 935 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
+.......+..+.+++.+|++.||.+|||+.++++.
T Consensus 227 ~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 227 PEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred CchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 222112234568899999999999999999999863
No 119
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=2.7e-39 Score=357.36 Aligned_cols=255 Identities=18% Similarity=0.202 Sum_probs=203.5
Q ss_pred hcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcC-CCCceeeeceeeeccceeEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKI-RHRNIVKFYGFCSHALHSFV 777 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~l 777 (973)
..+|++.+.||+|+||+||+|.. .+++.||||++..... .+.+.+|+.+++++ +||||+++++++..++..++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~l 82 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR-----APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAM 82 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS-----SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc-----hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEE
Confidence 36799999999999999999964 5889999999875422 24578899999999 99999999999999999999
Q ss_pred EEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCc-----eEEecccc
Q 002069 778 VYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYE-----AHVSDFGI 852 (973)
Q Consensus 778 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~-----~kl~Dfg~ 852 (973)
||||+ +++|.+++... ...+++.+++.++.|++.|++|||+. +|+||||||+||+++.++. +||+|||+
T Consensus 83 v~e~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~ 156 (330)
T 2izr_A 83 VLELL-GPSLEDLFDLC--DRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFAL 156 (330)
T ss_dssp EEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTT
T ss_pred EEEeC-CCCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEccc
Confidence 99999 89999999754 24689999999999999999999999 9999999999999998887 99999999
Q ss_pred cccccCCCCc-------ccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhh
Q 002069 853 SKFLKLGLSN-------RTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALD 925 (973)
Q Consensus 853 a~~~~~~~~~-------~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 925 (973)
++.+...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||....... ......
T Consensus 157 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~------~~~~~~ 230 (330)
T 2izr_A 157 AKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADT------LKERYQ 230 (330)
T ss_dssp CEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSS------HHHHHH
T ss_pred ceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcccccccc------HHHHHH
Confidence 9876543221 245679999999999999999999999999999999999999997532100 000000
Q ss_pred hhcCCCCCCCchh-hHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 926 EMLDPRLPTPLRN-VQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 926 ~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
.......+..... ....+ .+.+++..||+.||.+||++++|.+.|+
T Consensus 231 ~i~~~~~~~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~ 277 (330)
T 2izr_A 231 KIGDTKRATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFT 277 (330)
T ss_dssp HHHHHHHHSCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHH
T ss_pred HHHhhhccCCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHH
Confidence 0000000000000 00112 6889999999999999999999998774
No 120
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.7e-38 Score=346.96 Aligned_cols=252 Identities=27% Similarity=0.443 Sum_probs=197.0
Q ss_pred hcCCcccccccCCCceeEEEEEcCCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELPTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVVY 779 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 779 (973)
.++|++.+.||+|+||+||+|.+ .++.||||++... ...+.|.+|+.++++++||||+++++++.+ ..++||
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~ 78 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESE-----SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVM 78 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEE-TTEEEEEEECSST-----THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEE
T ss_pred HhHeeeeeEeecCCCceEEEEEE-CCeeEEEEEecCh-----hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEE
Confidence 35789999999999999999987 4789999998642 235789999999999999999999999874 478999
Q ss_pred EecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCc-eEEecccccccccC
Q 002069 780 EYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYE-AHVSDFGISKFLKL 858 (973)
Q Consensus 780 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~-~kl~Dfg~a~~~~~ 858 (973)
||+++++|.++++.......+++..++.++.|+++|++|||+....+|+||||||+||+++.++. +||+|||.+.....
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~ 158 (307)
T 2eva_A 79 EYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT 158 (307)
T ss_dssp ECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------
T ss_pred EcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccc
Confidence 99999999999987665556889999999999999999999932128999999999999998886 79999999976543
Q ss_pred CCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCCchh
Q 002069 859 GLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLPTPLRN 938 (973)
Q Consensus 859 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 938 (973)
. .....||+.|+|||++.+..++.++||||||+++|||++|+.||+....... ...........+....
T Consensus 159 ~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-------~~~~~~~~~~~~~~~~- 227 (307)
T 2eva_A 159 H---MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAF-------RIMWAVHNGTRPPLIK- 227 (307)
T ss_dssp ---------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHH-------HHHHHHHTTCCCCCBT-
T ss_pred c---cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHH-------HHHHHHhcCCCCCccc-
Confidence 2 2345689999999999999999999999999999999999999974321100 0000111111111111
Q ss_pred hHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 939 VQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 939 ~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
..+..+.+++.+||+.||.+|||++++++.|+
T Consensus 228 --~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 259 (307)
T 2eva_A 228 --NLPKPIESLMTRCWSKDPSQRPSMEEIVKIMT 259 (307)
T ss_dssp --TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred --ccCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 12335778999999999999999999999874
No 121
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1.2e-38 Score=351.48 Aligned_cols=257 Identities=21% Similarity=0.340 Sum_probs=190.5
Q ss_pred hcCCcccccccCCCceeEEEEEcCC-C---CEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeecccee
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELPT-G---EIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHS 775 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~-~---~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 775 (973)
.++|++.+.||+|+||+||+|.... + ..||||++....... ...+.+.+|+.++++++||||+++++++......
T Consensus 22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIAS-SDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------C-HHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCH-HHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 4689999999999999999997653 3 279999997643322 3367899999999999999999999999776554
Q ss_pred ------EEEEEecCCCChHHHhccCcc---ccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceE
Q 002069 776 ------FVVYEYLEMGSLAMILSNDAA---AEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAH 846 (973)
Q Consensus 776 ------~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~k 846 (973)
++||||+++++|.+++..... ...+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.+|
T Consensus 101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~k 177 (323)
T 3qup_A 101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVC 177 (323)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEE
T ss_pred cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCEE
Confidence 899999999999999964332 12589999999999999999999999 999999999999999999999
Q ss_pred EecccccccccCCCC--cccccccccCcccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcchhhhhhhhhhhhhhh
Q 002069 847 VSDFGISKFLKLGLS--NRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSICSSLSSNLNIA 923 (973)
Q Consensus 847 l~Dfg~a~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~ 923 (973)
|+|||.++....... ......+++.|+|||.+.+..++.++|||||||++|||++ |+.||...... ..
T Consensus 178 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~---------~~ 248 (323)
T 3qup_A 178 VADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA---------EI 248 (323)
T ss_dssp ECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG---------GH
T ss_pred EeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChH---------HH
Confidence 999999987654322 2223456789999999999999999999999999999999 99999744321 11
Q ss_pred hhhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 924 LDEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
............. ...+..+.+++.+||+.||++|||+.++++.|+
T Consensus 249 ~~~~~~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~ 294 (323)
T 3qup_A 249 YNYLIGGNRLKQP---PECMEEVYDLMYQCWSADPKQRPSFTCLRMELE 294 (323)
T ss_dssp HHHHHTTCCCCCC---TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHhcCCCCCCC---CccCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 1111111111111 112345789999999999999999999998875
No 122
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=7.3e-39 Score=369.10 Aligned_cols=253 Identities=23% Similarity=0.393 Sum_probs=206.7
Q ss_pred HhcCCcccccccCCCceeEEEEEcCCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEE
Q 002069 699 ATKNFDDEHCIGNGGQGSVYKAELPTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVV 778 (973)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 778 (973)
..++|++.+.||+|+||+||+|.+.+++.||||+++.... ..+.|.+|+.++++++||||+++++++. .+..++|
T Consensus 186 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv 260 (454)
T 1qcf_A 186 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM----SVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYII 260 (454)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSB----CHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred chHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCc----cHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEE
Confidence 3568999999999999999999988889999999975432 2578999999999999999999999987 5578999
Q ss_pred EEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccC
Q 002069 779 YEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKL 858 (973)
Q Consensus 779 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 858 (973)
|||+++|+|.++++... ...+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 261 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~ 336 (454)
T 1qcf_A 261 TEFMAKGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIED 336 (454)
T ss_dssp ECCCTTCBHHHHHHSHH-HHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCC
T ss_pred EeecCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCC
Confidence 99999999999997543 23578999999999999999999999 999999999999999999999999999987643
Q ss_pred CCC-cccccccccCcccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCCc
Q 002069 859 GLS-NRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSICSSLSSNLNIALDEMLDPRLPTPL 936 (973)
Q Consensus 859 ~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (973)
... ......+++.|+|||++....++.++|||||||++|||+| |+.||....... ....+........+.
T Consensus 337 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~------~~~~i~~~~~~~~~~-- 408 (454)
T 1qcf_A 337 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE------VIRALERGYRMPRPE-- 408 (454)
T ss_dssp HHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH------HHHHHHHTCCCCCCT--
T ss_pred CceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHH------HHHHHHcCCCCCCCC--
Confidence 211 1223456789999999998899999999999999999999 999997543211 011111111111111
Q ss_pred hhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 937 RNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 937 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
..+..+.+++.+||+.||++|||+++|++.|+
T Consensus 409 ----~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~ 440 (454)
T 1qcf_A 409 ----NCPEELYNIMMRCWKNRPEERPTFEYIQSVLD 440 (454)
T ss_dssp ----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ----CCCHHHHHHHHHHccCChhHCcCHHHHHHHHH
Confidence 22345789999999999999999999999875
No 123
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=7.7e-39 Score=356.49 Aligned_cols=263 Identities=24% Similarity=0.236 Sum_probs=203.5
Q ss_pred HHHHhcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCC--cchhhHHHHHHHHHHhhcCCCCceeeeceeeecc
Q 002069 696 IIRATKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLP--GEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHA 772 (973)
Q Consensus 696 ~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 772 (973)
+....++|++.+.||+|+||+||+|.. .+++.||+|++..... ......+.+.+|+.++++++||||+++++++.+.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 345678899999999999999999955 5788999999863211 1123357899999999999999999999999999
Q ss_pred ceeEEEEEecCCCChHHHhccCcc-------------------------------------ccCCCHHHHHHHHHHHHHH
Q 002069 773 LHSFVVYEYLEMGSLAMILSNDAA-------------------------------------AEEFGWTKRMNAIKGVADA 815 (973)
Q Consensus 773 ~~~~lv~e~~~~~~L~~~l~~~~~-------------------------------------~~~~~~~~~~~i~~~i~~~ 815 (973)
+..++||||+++|+|.+++..... ...+++..++.++.|++.|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~ 180 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 999999999999999999852110 1123577888999999999
Q ss_pred HHHHhhCCCCCeEeecCCCCCeeecCCC--ceEEecccccccccCCCC----cccccccccCccccccccc--CCCCCcc
Q 002069 816 LLYMHTNCFPPIVHRDISSKNVLLNLEY--EAHVSDFGISKFLKLGLS----NRTELAGTFGYIAPELAYT--MKVTEKC 887 (973)
Q Consensus 816 l~~LH~~~~~~i~H~Dlk~~Nill~~~~--~~kl~Dfg~a~~~~~~~~----~~~~~~g~~~y~aPE~~~~--~~~~~~~ 887 (973)
++|||+. +|+||||||+||+++.++ .+||+|||.++.+..... ......||+.|+|||++.+ ..++.++
T Consensus 181 l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 257 (345)
T 3hko_A 181 LHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257 (345)
T ss_dssp HHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHH
T ss_pred HHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHH
Confidence 9999999 999999999999998776 899999999986643221 2345679999999999875 6788999
Q ss_pred chHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHH
Q 002069 888 DVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKV 967 (973)
Q Consensus 888 Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev 967 (973)
|||||||++|||++|+.||...... ........................+.+++.+||+.||.+||++.++
T Consensus 258 DiwslG~il~el~~g~~pf~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~ 328 (345)
T 3hko_A 258 DAWSAGVLLHLLLMGAVPFPGVNDA---------DTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRA 328 (345)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHH---------HHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCCCChH---------HHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHH
Confidence 9999999999999999999754321 1111111222211112222234567899999999999999999999
Q ss_pred HHH
Q 002069 968 SQL 970 (973)
Q Consensus 968 ~~~ 970 (973)
++.
T Consensus 329 l~h 331 (345)
T 3hko_A 329 LQH 331 (345)
T ss_dssp HHS
T ss_pred hcC
Confidence 874
No 124
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=2.6e-38 Score=343.59 Aligned_cols=252 Identities=22% Similarity=0.310 Sum_probs=209.6
Q ss_pred hcCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVV 778 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 778 (973)
.++|.+.+.||+|+||.||+|... +++.||+|++...........+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 467999999999999999999654 6889999998755444445567899999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccC
Q 002069 779 YEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKL 858 (973)
Q Consensus 779 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 858 (973)
|||+++++|.+++... ..+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||.++....
T Consensus 94 ~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 167 (294)
T 2rku_A 94 LELCRRRSLLELHKRR---KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY 167 (294)
T ss_dssp EECCTTCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceeccc
Confidence 9999999999988643 3688999999999999999999999 999999999999999999999999999987765
Q ss_pred CCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCCchh
Q 002069 859 GLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLPTPLRN 938 (973)
Q Consensus 859 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 938 (973)
.........|++.|+|||.+.+..++.++||||+|+++|+|++|+.||....... ............+.
T Consensus 168 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~---------~~~~~~~~~~~~~~-- 236 (294)
T 2rku_A 168 DGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE---------TYLRIKKNEYSIPK-- 236 (294)
T ss_dssp TTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH---------HHHHHHTTCCCCCT--
T ss_pred CccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---------HHHHHhhccCCCcc--
Confidence 5445556779999999999999889999999999999999999999997433211 11111111111111
Q ss_pred hHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 939 VQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 939 ~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
.....+.+++.+||+.||++|||++|+++.
T Consensus 237 --~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 237 --HINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp --TSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred --ccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 112347789999999999999999999864
No 125
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.3e-38 Score=355.44 Aligned_cols=253 Identities=24% Similarity=0.280 Sum_probs=193.7
Q ss_pred hcCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVV 778 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 778 (973)
.++|++.+.||+|+||+||+|... +++.||||++...... .+.+.+|+.++++++||||+++++++.+++..++|
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 94 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAI----DENVQREIINHRSLRHPNIVRFKEVILTPTHLAII 94 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTS----CHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccc----cHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEE
Confidence 468999999999999999999664 8999999999754322 36688999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCc--eEEecccccccc
Q 002069 779 YEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYE--AHVSDFGISKFL 856 (973)
Q Consensus 779 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~--~kl~Dfg~a~~~ 856 (973)
|||+++|+|.+++... ..+++.+++.++.|++.|++|||+. +|+||||||+||+++.++. +||+|||.++..
T Consensus 95 ~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~ 168 (361)
T 3uc3_A 95 MEYASGGELYERICNA---GRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSS 168 (361)
T ss_dssp EECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC---
T ss_pred EEeCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCccccc
Confidence 9999999999998643 3589999999999999999999999 9999999999999987765 999999999754
Q ss_pred cCCCCcccccccccCcccccccccCCCCCc-cchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCC
Q 002069 857 KLGLSNRTELAGTFGYIAPELAYTMKVTEK-CDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLPTP 935 (973)
Q Consensus 857 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~-~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 935 (973)
... .......||+.|+|||++.+..++.+ +||||+||++|+|++|+.||........ ...............+
T Consensus 169 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~-----~~~~~~~~~~~~~~~~ 242 (361)
T 3uc3_A 169 VLH-SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD-----YRKTIQRILSVKYSIP 242 (361)
T ss_dssp -------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCC-----HHHHHHHHHTTCCCCC
T ss_pred ccc-CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHH-----HHHHHHHHhcCCCCCC
Confidence 332 23345679999999999988887665 8999999999999999999975432111 1111222222221111
Q ss_pred chhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 936 LRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 936 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
.. ...+..+.+++.+||+.||.+|||++|+++.
T Consensus 243 ~~--~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 243 DD--IRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp TT--SCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred Cc--CCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 10 1122357789999999999999999999864
No 126
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.4e-39 Score=357.48 Aligned_cols=258 Identities=22% Similarity=0.351 Sum_probs=206.4
Q ss_pred HhcCCcccccccCCCceeEEEEEc------CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcC-CCCceeeeceeeec
Q 002069 699 ATKNFDDEHCIGNGGQGSVYKAEL------PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKI-RHRNIVKFYGFCSH 771 (973)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~ 771 (973)
..++|++.+.||+|+||.||+|.. .+++.||||++...... ...+.+.+|+.+++++ +||||+++++++..
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 120 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADS--SEREALMSELKMMTQLGSHENIVNLLGACTL 120 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCH--HHHHHHHHHHHHHHhhcCCCCeeeEEEEEee
Confidence 457899999999999999999974 24568999999754322 2357899999999999 89999999999999
Q ss_pred cceeEEEEEecCCCChHHHhccCccc--------------------cCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeec
Q 002069 772 ALHSFVVYEYLEMGSLAMILSNDAAA--------------------EEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRD 831 (973)
Q Consensus 772 ~~~~~lv~e~~~~~~L~~~l~~~~~~--------------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~D 831 (973)
.+..++||||+++|+|.+++...... ..+++.+++.++.|++.|++|||+. +|+|||
T Consensus 121 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~D 197 (344)
T 1rjb_A 121 SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRD 197 (344)
T ss_dssp SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETT
T ss_pred CCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCC
Confidence 99999999999999999999765421 3478999999999999999999999 999999
Q ss_pred CCCCCeeecCCCceEEecccccccccCCCC--cccccccccCcccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcc
Q 002069 832 ISSKNVLLNLEYEAHVSDFGISKFLKLGLS--NRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDF 908 (973)
Q Consensus 832 lk~~Nill~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~ 908 (973)
|||+||+++.++.+||+|||.+........ ......||+.|+|||.+.+..++.++||||||+++|||+| |+.||..
T Consensus 198 ikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 277 (344)
T 1rjb_A 198 LAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPG 277 (344)
T ss_dssp CSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred CChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCccc
Confidence 999999999999999999999987654432 2234567889999999998899999999999999999998 9999975
Q ss_pred hhhhhhhhhhhhhhhhhhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 909 ISSICSSLSSNLNIALDEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
...... .............+. ..+..+.+++.+||+.||.+|||++++++.|+
T Consensus 278 ~~~~~~-----~~~~~~~~~~~~~~~------~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~ 330 (344)
T 1rjb_A 278 IPVDAN-----FYKLIQNGFKMDQPF------YATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 330 (344)
T ss_dssp CCCSHH-----HHHHHHTTCCCCCCT------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCcHHH-----HHHHHhcCCCCCCCC------CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence 432110 111111111222111 12345788999999999999999999999875
No 127
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1.8e-38 Score=343.65 Aligned_cols=254 Identities=30% Similarity=0.449 Sum_probs=202.4
Q ss_pred hcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhh----HHHHHHHHHHhhcCCCCceeeeceeeeccce
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMAC----QQEFLNEGNALTKIRHRNIVKFYGFCSHALH 774 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~----~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 774 (973)
.++|++.+.||+|+||+||+|.. .+++.||||++.......... .+.+.+|+.++++++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 36899999999999999999965 589999999987654332221 167899999999999999999999997654
Q ss_pred eEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCC--eEeecCCCCCeeecCCCc-----eEE
Q 002069 775 SFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPP--IVHRDISSKNVLLNLEYE-----AHV 847 (973)
Q Consensus 775 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~--i~H~Dlk~~Nill~~~~~-----~kl 847 (973)
++||||+++++|.+++.... ..+++..++.++.|++.|++|||+. + |+||||||+||+++.++. +||
T Consensus 97 -~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl 170 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDKA--HPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKV 170 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEE
T ss_pred -eEEEEecCCCCHHHHHhccc--CCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEe
Confidence 69999999999999886543 4689999999999999999999999 8 999999999999988776 999
Q ss_pred ecccccccccCCCCcccccccccCcccccccc--cCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhh
Q 002069 848 SDFGISKFLKLGLSNRTELAGTFGYIAPELAY--TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALD 925 (973)
Q Consensus 848 ~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~--~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 925 (973)
+|||.++.... ......||+.|+|||++. ...++.++||||+||++|||++|+.||.......... ......
T Consensus 171 ~Dfg~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~---~~~~~~ 244 (287)
T 4f0f_A 171 ADFGLSQQSVH---SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKF---INMIRE 244 (287)
T ss_dssp CCCTTCBCCSS---CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHH---HHHHHH
T ss_pred CCCCccccccc---cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHH---HHHHhc
Confidence 99999975433 334567999999999984 4557889999999999999999999997433111000 011111
Q ss_pred hhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 926 EMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
....+..+. ..+..+.+++.+||+.||.+|||++++++.|+
T Consensus 245 ~~~~~~~~~------~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~ 285 (287)
T 4f0f_A 245 EGLRPTIPE------DCPPRLRNVIELCWSGDPKKRPHFSYIVKELS 285 (287)
T ss_dssp SCCCCCCCT------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cCCCCCCCc------ccCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 112222222 12345789999999999999999999999885
No 128
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=5.9e-39 Score=354.79 Aligned_cols=253 Identities=20% Similarity=0.226 Sum_probs=201.3
Q ss_pred HhcCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcC-CCCceeeeceeeeccceeE
Q 002069 699 ATKNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKI-RHRNIVKFYGFCSHALHSF 776 (973)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 776 (973)
..++|++.+.||+|+||.||+|... +++.||||++...... +.+|++++.++ +||||+++++++.+++..|
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-------~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~ 92 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD-------PTEEIEILLRYGQHPNIITLKDVYDDGKYVY 92 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC-------CHHHHHHHHHHTTSTTBCCEEEEEECSSEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC-------hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEE
Confidence 4567999999999999999999654 7899999999754322 34577777777 7999999999999999999
Q ss_pred EEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCC----CceEEecccc
Q 002069 777 VVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLE----YEAHVSDFGI 852 (973)
Q Consensus 777 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~----~~~kl~Dfg~ 852 (973)
+||||+++|+|.+++.... .+++.++..++.||+.|++|||+. +|+||||||+||++..+ +.+||+|||+
T Consensus 93 lv~E~~~gg~L~~~i~~~~---~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~ 166 (342)
T 2qr7_A 93 VVTELMKGGELLDKILRQK---FFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGF 166 (342)
T ss_dssp EEECCCCSCBHHHHHHTCT---TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTT
T ss_pred EEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCC
Confidence 9999999999999997543 589999999999999999999999 99999999999998443 3599999999
Q ss_pred cccccCCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCC
Q 002069 853 SKFLKLGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRL 932 (973)
Q Consensus 853 a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 932 (973)
++.............||+.|+|||++.+..++.++||||+||++|||++|+.||...... ........+....+
T Consensus 167 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~------~~~~~~~~i~~~~~ 240 (342)
T 2qr7_A 167 AKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDD------TPEEILARIGSGKF 240 (342)
T ss_dssp CEECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTS------CHHHHHHHHHHCCC
T ss_pred cccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcC------CHHHHHHHHccCCc
Confidence 987765544555678999999999998888899999999999999999999999743210 01111111111122
Q ss_pred CCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 933 PTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 933 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
......+...+..+.+++.+||+.||++|||++++++.
T Consensus 241 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 241 SLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp CCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred ccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 11111112233457889999999999999999999863
No 129
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=3.5e-39 Score=366.46 Aligned_cols=264 Identities=19% Similarity=0.223 Sum_probs=207.1
Q ss_pred HHHHHHhcCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeecc
Q 002069 694 EEIIRATKNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHA 772 (973)
Q Consensus 694 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 772 (973)
.++....++|++.++||+|+||+||+|+.. +++.||+|++.............+.+|..++..++||||+++++++.++
T Consensus 67 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~ 146 (437)
T 4aw2_A 67 KQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDD 146 (437)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECS
T ss_pred hcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeC
Confidence 344445689999999999999999999765 6889999998642111111223488899999999999999999999999
Q ss_pred ceeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccc
Q 002069 773 LHSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGI 852 (973)
Q Consensus 773 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~ 852 (973)
+..++||||+++|+|.+++.... ..+++..++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 147 ~~~~lV~Ey~~gg~L~~~l~~~~--~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DFGl 221 (437)
T 4aw2_A 147 NNLYLVMDYYVGGDLLTLLSKFE--DRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGS 221 (437)
T ss_dssp SEEEEEECCCTTCBHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CEEEEEEecCCCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcchhh
Confidence 99999999999999999997532 4689999999999999999999999 999999999999999999999999999
Q ss_pred cccccCCCC-cccccccccCcccccccc-----cCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhh
Q 002069 853 SKFLKLGLS-NRTELAGTFGYIAPELAY-----TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDE 926 (973)
Q Consensus 853 a~~~~~~~~-~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 926 (973)
|+....... ......||+.|+|||++. ...++.++|||||||++|||++|+.||........ .......
T Consensus 222 a~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~-----~~~i~~~ 296 (437)
T 4aw2_A 222 CLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET-----YGKIMNH 296 (437)
T ss_dssp CEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-----HHHHHTH
T ss_pred hhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHH-----HHhhhhc
Confidence 987654433 233467999999999987 45689999999999999999999999975432111 1111111
Q ss_pred hcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCC--CCCHHHHHHH
Q 002069 927 MLDPRLPTPLRNVQDKLISIMEVSISCLDESPTS--RPTMQKVSQL 970 (973)
Q Consensus 927 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~ev~~~ 970 (973)
.....++..... .+..+.+++.+|+..+|++ ||+++|+++.
T Consensus 297 ~~~~~~p~~~~~---~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 297 KERFQFPTQVTD---VSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp HHHCCCCSSCCC---SCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred cccccCCccccc---CCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 111122221111 2234678899999998888 9999999863
No 130
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=1.9e-38 Score=354.89 Aligned_cols=264 Identities=22% Similarity=0.344 Sum_probs=210.9
Q ss_pred ccHHHHHHHhcCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCc-----chhhHHHHHHHHHHhhcC-CCCcee
Q 002069 691 IVHEEIIRATKNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPG-----EMACQQEFLNEGNALTKI-RHRNIV 763 (973)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~~~~e~~~l~~l-~h~niv 763 (973)
...+......++|++.+.||+|+||.||+|... +|+.||||++...... .....+.+.+|+.+++++ +||||+
T Consensus 84 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv 163 (365)
T 2y7j_A 84 PDWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHII 163 (365)
T ss_dssp CHHHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBC
T ss_pred ccchhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEe
Confidence 344455566788999999999999999999764 7999999998754321 122246788999999999 899999
Q ss_pred eeceeeeccceeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCC
Q 002069 764 KFYGFCSHALHSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEY 843 (973)
Q Consensus 764 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~ 843 (973)
++++++......++||||+++++|.+++... ..+++..+..++.|++.|++|||+. |++||||||+||+++.++
T Consensus 164 ~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~ 237 (365)
T 2y7j_A 164 TLIDSYESSSFMFLVFDLMRKGELFDYLTEK---VALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNM 237 (365)
T ss_dssp CEEEEEEBSSEEEEEECCCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTC
T ss_pred EEEEEEeeCCEEEEEEEeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCC
Confidence 9999999999999999999999999999643 3689999999999999999999999 999999999999999999
Q ss_pred ceEEecccccccccCCCCcccccccccCccccccccc------CCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhh
Q 002069 844 EAHVSDFGISKFLKLGLSNRTELAGTFGYIAPELAYT------MKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLS 917 (973)
Q Consensus 844 ~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~------~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~ 917 (973)
.+|++|||++...... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.......
T Consensus 238 ~ikl~DfG~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~---- 312 (365)
T 2y7j_A 238 QIRLSDFGFSCHLEPG-EKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQIL---- 312 (365)
T ss_dssp CEEECCCTTCEECCTT-CCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH----
T ss_pred CEEEEecCcccccCCC-cccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHH----
Confidence 9999999999877644 23345679999999998863 357889999999999999999999997433211
Q ss_pred hhhhhhhhhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 918 SNLNIALDEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
................+...+..+.+++.+||+.||.+|||++++++.
T Consensus 313 -----~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 313 -----MLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp -----HHHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred -----HHHHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 111111111111111112234457899999999999999999999874
No 131
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=2e-38 Score=347.61 Aligned_cols=263 Identities=21% Similarity=0.299 Sum_probs=200.0
Q ss_pred cCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEEE
Q 002069 701 KNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVVY 779 (973)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 779 (973)
++|++.+.||+|+||+||+|... +|+.||||++..... .....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESED-DPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF 81 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC--HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeecccc-chHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence 67999999999999999999664 699999999876533 3334677889999999999999999999999999999999
Q ss_pred EecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccCC
Q 002069 780 EYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKLG 859 (973)
Q Consensus 780 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 859 (973)
||++++++.++++.. ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.++.....
T Consensus 82 e~~~~~~l~~~~~~~---~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 155 (311)
T 4agu_A 82 EYCDHTVLHELDRYQ---RGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGP 155 (311)
T ss_dssp ECCSEEHHHHHHHTS---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC--
T ss_pred EeCCCchHHHHHhhh---cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCc
Confidence 999999999988644 3588999999999999999999999 9999999999999999999999999999877655
Q ss_pred CCcccccccccCccccccccc-CCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhh------hhhhhhhh-----hhhh
Q 002069 860 LSNRTELAGTFGYIAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSS------LSSNLNIA-----LDEM 927 (973)
Q Consensus 860 ~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~------~~~~~~~~-----~~~~ 927 (973)
........||+.|+|||++.+ ..++.++||||+|+++|+|++|+.||......... ........ ....
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (311)
T 4agu_A 156 SDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQY 235 (311)
T ss_dssp ----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGG
T ss_pred ccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccc
Confidence 444556689999999999876 56899999999999999999999999754321110 00000000 0000
Q ss_pred c-CCCCCCC------chhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 928 L-DPRLPTP------LRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 928 ~-~~~~~~~------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
. ....+.. .......+..+.+++.+||+.||.+|||++|+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 236 FSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp GTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred cccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0 0011100 00011234457899999999999999999999864
No 132
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=2.4e-38 Score=364.05 Aligned_cols=248 Identities=28% Similarity=0.408 Sum_probs=202.0
Q ss_pred hcCCcccccccCCCceeEEEEEcCCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccc-eeEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELPTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHAL-HSFVV 778 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~lv 778 (973)
.++|++.+.||+|+||.||+|.+ .++.||||+++... ..+.|.+|+.++++++||||+++++++.+.. ..++|
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~-~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv 265 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 265 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEESSCT-----TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEE
T ss_pred hHHeEEEeeecCcCCeeEEEEEe-cCCeEEEEEeCCch-----HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEE
Confidence 46789999999999999999988 47899999998543 2478999999999999999999999987654 78999
Q ss_pred EEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccC
Q 002069 779 YEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKL 858 (973)
Q Consensus 779 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 858 (973)
|||+++|+|.++++... ...+++..++.++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 266 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 341 (450)
T 1k9a_A 266 TEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 341 (450)
T ss_dssp EECCTTCBHHHHHHHHC-TTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC-
T ss_pred EEecCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCcccccc
Confidence 99999999999997543 23478999999999999999999999 999999999999999999999999999985432
Q ss_pred CCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCCch
Q 002069 859 GLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSICSSLSSNLNIALDEMLDPRLPTPLR 937 (973)
Q Consensus 859 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 937 (973)
. .....+++.|+|||++.+..++.++|||||||++|||+| |+.||....... ....+........+.
T Consensus 342 ~---~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~------~~~~i~~~~~~~~p~--- 409 (450)
T 1k9a_A 342 T---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD------VVPRVEKGYKMDAPD--- 409 (450)
T ss_dssp --------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT------HHHHHHTTCCCCCCT---
T ss_pred c---ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH------HHHHHHcCCCCCCCC---
Confidence 2 223467889999999999999999999999999999998 999997443210 011111111111111
Q ss_pred hhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 938 NVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 938 ~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
..+..+.+++.+||+.||.+|||+.++++.|+
T Consensus 410 ---~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~ 441 (450)
T 1k9a_A 410 ---GCPPAVYDVMKNCWHLDAATRPTFLQLREQLE 441 (450)
T ss_dssp ---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ---cCCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 22345788999999999999999999998875
No 133
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=2.2e-38 Score=347.08 Aligned_cols=261 Identities=22% Similarity=0.277 Sum_probs=198.2
Q ss_pred hcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVV 778 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 778 (973)
..+|++.+.||+|+||.||+|.. .+|+.||||++.............+.+|+.++++++||||+++++++...+..++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 46799999999999999999965 58999999999865444455578899999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccCc-cccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEeccccccccc
Q 002069 779 YEYLEMGSLAMILSNDA-AAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLK 857 (973)
Q Consensus 779 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 857 (973)
|||+++++|.+++.... ....+++..++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||.++...
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 99999999999986432 234588999999999999999999999 99999999999999999999999999998766
Q ss_pred CCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCCch
Q 002069 858 LGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLPTPLR 937 (973)
Q Consensus 858 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 937 (973)
..........|++.|+|||.+.+..++.++||||||+++|+|++|+.||........ ...........+....
T Consensus 188 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-------~~~~~~~~~~~~~~~~ 260 (310)
T 2wqm_A 188 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY-------SLCKKIEQCDYPPLPS 260 (310)
T ss_dssp -----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHH-------HHHHHHHTTCSCCCCT
T ss_pred CCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHH-------HHHHHhhcccCCCCcc
Confidence 544444456789999999999998999999999999999999999999864321100 0111111111111100
Q ss_pred hhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 938 NVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 938 ~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
...+..+.+++.+||+.||.+|||+++|++.|+
T Consensus 261 --~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~ 293 (310)
T 2wqm_A 261 --DHYSEELRQLVNMCINPDPEKRPDVTYVYDVAK 293 (310)
T ss_dssp --TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred --cccCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 112345788999999999999999999999875
No 134
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=5.7e-39 Score=369.63 Aligned_cols=250 Identities=22% Similarity=0.258 Sum_probs=196.1
Q ss_pred hcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVV 778 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 778 (973)
.++|++.+.||+|+||.||+|.. .+|+.||||++.............+.+|+.+++.++||||+++++++...+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 46799999999999999999964 58999999998643222223346778899999999999999999999999999999
Q ss_pred EEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEeecCCCCCeeecCCCceEEeccccccccc
Q 002069 779 YEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHT-NCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLK 857 (973)
Q Consensus 779 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~-~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 857 (973)
|||+++|+|.+++... ..+++..+..++.|++.||+|||+ . +|+||||||+||+++.++.+||+|||+|+...
T Consensus 227 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 300 (446)
T 4ejn_A 227 MEYANGGELFFHLSRE---RVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 300 (446)
T ss_dssp ECCCSSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTTC
T ss_pred EeeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceecc
Confidence 9999999999998653 368999999999999999999998 7 99999999999999999999999999998655
Q ss_pred CCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhc--CCCCCCC
Q 002069 858 LGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEML--DPRLPTP 935 (973)
Q Consensus 858 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 935 (973)
..........||+.|+|||++.+..++.++|||||||++|||++|+.||...... ....... ...++..
T Consensus 301 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~---------~~~~~i~~~~~~~p~~ 371 (446)
T 4ejn_A 301 KDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE---------KLFELILMEEIRFPRT 371 (446)
T ss_dssp C-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---------HHHHHHHHCCCCCCTT
T ss_pred CCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH---------HHHHHHHhCCCCCCcc
Confidence 4444555678999999999999999999999999999999999999999743321 1111111 1112221
Q ss_pred chhhHHHHHHHHHHHhcccCCCCCCCC-----CHHHHHHH
Q 002069 936 LRNVQDKLISIMEVSISCLDESPTSRP-----TMQKVSQL 970 (973)
Q Consensus 936 ~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~ev~~~ 970 (973)
....+.+++.+||+.||.+|| +++|+++.
T Consensus 372 ------~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h 405 (446)
T 4ejn_A 372 ------LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405 (446)
T ss_dssp ------SCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred ------CCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence 223577899999999999999 99999863
No 135
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.3e-38 Score=348.33 Aligned_cols=258 Identities=20% Similarity=0.289 Sum_probs=199.1
Q ss_pred HhcCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEE
Q 002069 699 ATKNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFV 777 (973)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 777 (973)
..++|++.+.||+|+||.||+|... +++.||||++...........+.+.+|+.++++++||||+++++++..++..++
T Consensus 32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 111 (309)
T 2h34_A 32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYV 111 (309)
T ss_dssp --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEE
Confidence 3578999999999999999999654 789999999976544444456889999999999999999999999999999999
Q ss_pred EEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEeccccccccc
Q 002069 778 VYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLK 857 (973)
Q Consensus 778 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 857 (973)
||||+++++|.++++.. ..+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.+....
T Consensus 112 v~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 185 (309)
T 2h34_A 112 DMRLINGVDLAAMLRRQ---GPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATT 185 (309)
T ss_dssp EEECCCCEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC-----
T ss_pred EEEecCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCcccc
Confidence 99999999999999753 3589999999999999999999999 99999999999999999999999999998665
Q ss_pred CCC-CcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCCc
Q 002069 858 LGL-SNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLPTPL 936 (973)
Q Consensus 858 ~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (973)
... .......|++.|+|||.+.+..++.++||||||+++|||++|+.||...... .. ..... ...+...
T Consensus 186 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~----~~~~~----~~~~~~~ 255 (309)
T 2h34_A 186 DEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--VM----GAHIN----QAIPRPS 255 (309)
T ss_dssp -----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--HH----HHHHH----SCCCCGG
T ss_pred ccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--HH----HHHhc----cCCCCcc
Confidence 432 2233457899999999999999999999999999999999999999754321 00 01111 1111111
Q ss_pred hhhHHHHHHHHHHHhcccCCCCCCCC-CHHHHHHHhc
Q 002069 937 RNVQDKLISIMEVSISCLDESPTSRP-TMQKVSQLLK 972 (973)
Q Consensus 937 ~~~~~~~~~l~~li~~cl~~dP~~RP-s~~ev~~~L~ 972 (973)
......+..+.+++.+||+.||++|| +++++++.|+
T Consensus 256 ~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~ 292 (309)
T 2h34_A 256 TVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAH 292 (309)
T ss_dssp GTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred ccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHH
Confidence 11112233577899999999999999 9999998874
No 136
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=5.6e-39 Score=353.88 Aligned_cols=260 Identities=22% Similarity=0.338 Sum_probs=209.5
Q ss_pred HHHHhcCCcccccccCCCceeEEEEEcC------CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceee
Q 002069 696 IIRATKNFDDEHCIGNGGQGSVYKAELP------TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFC 769 (973)
Q Consensus 696 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~ 769 (973)
+....++|++.+.||+|+||.||+|... +++.||||++.... .......+.+|+.++++++||||+++++++
T Consensus 20 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 97 (322)
T 1p4o_A 20 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFNCHHVVRLLGVV 97 (322)
T ss_dssp TBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS--CHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred hcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc--CHHHHHHHHHHHHHHHhcCCCCEeeeEEEE
Confidence 3445678999999999999999999653 46789999997543 233457799999999999999999999999
Q ss_pred eccceeEEEEEecCCCChHHHhccCcc-------ccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCC
Q 002069 770 SHALHSFVVYEYLEMGSLAMILSNDAA-------AEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLE 842 (973)
Q Consensus 770 ~~~~~~~lv~e~~~~~~L~~~l~~~~~-------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~ 842 (973)
.+++..++||||+++++|.++++.... ...+++..++.++.|++.|++|||++ +|+||||||+||+++.+
T Consensus 98 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~ 174 (322)
T 1p4o_A 98 SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAED 174 (322)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTT
T ss_pred ccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCC
Confidence 999999999999999999999965332 14578999999999999999999999 99999999999999999
Q ss_pred CceEEecccccccccCCCC--cccccccccCcccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcchhhhhhhhhhh
Q 002069 843 YEAHVSDFGISKFLKLGLS--NRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSICSSLSSN 919 (973)
Q Consensus 843 ~~~kl~Dfg~a~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~ 919 (973)
+.+||+|||.++....... ......+++.|+|||.+.+..++.++||||+|+++|||++ |+.||......
T Consensus 175 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~------- 247 (322)
T 1p4o_A 175 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE------- 247 (322)
T ss_dssp CCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH-------
T ss_pred CeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH-------
Confidence 9999999999986644322 1223456889999999998899999999999999999999 89998743321
Q ss_pred hhhhhhhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 920 LNIALDEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
................ ..+..+.+++.+||+.||.+|||+.|+++.|+
T Consensus 248 --~~~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~ 295 (322)
T 1p4o_A 248 --QVLRFVMEGGLLDKPD---NCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 295 (322)
T ss_dssp --HHHHHHHTTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHG
T ss_pred --HHHHHHHcCCcCCCCC---CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 1111111111111111 12345788999999999999999999999875
No 137
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.8e-38 Score=339.73 Aligned_cols=252 Identities=24% Similarity=0.389 Sum_probs=206.9
Q ss_pred hcCCcccccccCCCceeEEEEEcCCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELPTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVVY 779 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 779 (973)
.++|++.+.||+|+||.||+|...+++.||+|++...... .+.+.+|+.++++++||||+++++++.+++..++||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS----EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVT 82 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBC----HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCC----HHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEE
Confidence 3679999999999999999998888899999999864332 467899999999999999999999999999999999
Q ss_pred EecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccCC
Q 002069 780 EYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKLG 859 (973)
Q Consensus 780 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 859 (973)
||+++++|.+++.... ..+++..++.++.|++.|++|||+. +++||||||+||+++.++.+|++|||.++.....
T Consensus 83 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 157 (267)
T 3t9t_A 83 EFMEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 157 (267)
T ss_dssp CCCTTCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred eCCCCCcHHHHHhhCc--ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEcccccccccccc
Confidence 9999999999997543 3578999999999999999999999 9999999999999999999999999999866432
Q ss_pred C-CcccccccccCcccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCCch
Q 002069 860 L-SNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSICSSLSSNLNIALDEMLDPRLPTPLR 937 (973)
Q Consensus 860 ~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 937 (973)
. .......+++.|+|||.+.+..++.++||||+|+++|||++ |+.||....... .............+..
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~------~~~~i~~~~~~~~~~~-- 229 (267)
T 3t9t_A 158 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE------VVEDISTGFRLYKPRL-- 229 (267)
T ss_dssp HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH------HHHHHHTTCCCCCCTT--
T ss_pred cccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHH------HHHHHhcCCcCCCCcc--
Confidence 1 12233557889999999998889999999999999999999 899987433210 0011111111111111
Q ss_pred hhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 938 NVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 938 ~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
.+..+.+++.+||+.||.+|||++++++.|+
T Consensus 230 ----~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~ 260 (267)
T 3t9t_A 230 ----ASTHVYQIMNHCWRERPEDRPAFSRLLRQLA 260 (267)
T ss_dssp ----SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ----CcHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 2335788999999999999999999999875
No 138
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=1.7e-38 Score=342.54 Aligned_cols=253 Identities=21% Similarity=0.352 Sum_probs=193.0
Q ss_pred hcCCcccccccCCCceeEEEEEcC----CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeecccee
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELP----TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHS 775 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 775 (973)
.++|++.+.||+|+||.||+|... .+..||+|++.... .....+.+.+|+.++++++||||+++++++. ++..
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~ 90 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT--SDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV 90 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT--SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSC
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCcc
Confidence 468999999999999999999653 24579999987543 2344678999999999999999999999985 4578
Q ss_pred EEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEeccccccc
Q 002069 776 FVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKF 855 (973)
Q Consensus 776 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~ 855 (973)
++||||+++++|.+++.... ..+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||.++.
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 165 (281)
T 1mp8_A 91 WIIMELCTLGELRSFLQVRK--YSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRY 165 (281)
T ss_dssp EEEEECCTTEEHHHHHHHTT--TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC------
T ss_pred EEEEecCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccccccc
Confidence 89999999999999997543 3588999999999999999999999 999999999999999999999999999987
Q ss_pred ccCCCC-cccccccccCcccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcchhhhhhhhhhhhhhhhhhhcCCCCC
Q 002069 856 LKLGLS-NRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSICSSLSSNLNIALDEMLDPRLP 933 (973)
Q Consensus 856 ~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 933 (973)
...... ......+++.|+|||.+.+..++.++||||||+++|||++ |..||....... .............+
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~------~~~~i~~~~~~~~~ 239 (281)
T 1mp8_A 166 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND------VIGRIENGERLPMP 239 (281)
T ss_dssp -------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG------HHHHHHTTCCCCCC
T ss_pred cCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH------HHHHHHcCCCCCCC
Confidence 654322 2233456789999999998899999999999999999997 999997433210 00011111111111
Q ss_pred CCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 934 TPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 934 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
. ..+..+.+++.+||+.||.+|||+.++++.|+
T Consensus 240 ~------~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 272 (281)
T 1mp8_A 240 P------NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 272 (281)
T ss_dssp T------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred C------CCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 1 12345778999999999999999999999875
No 139
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=1.5e-38 Score=341.13 Aligned_cols=251 Identities=19% Similarity=0.279 Sum_probs=204.3
Q ss_pred hcCCcccccccCCCceeEEEEEcCCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeecc--ceeEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELPTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHA--LHSFV 777 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~l 777 (973)
.++|++.+.||+|+||+||+|.+ +++.||||++...... ....+.+.+|+.++++++||||+++++++.++ ...++
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~~avK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 86 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWS-TRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTL 86 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECCTTCC-HHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEE-CCeeEEEEEecccccC-HHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEe
Confidence 46799999999999999999988 4889999999865433 33457899999999999999999999999876 77899
Q ss_pred EEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCC--eEeecCCCCCeeecCCCceEEeccccccc
Q 002069 778 VYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPP--IVHRDISSKNVLLNLEYEAHVSDFGISKF 855 (973)
Q Consensus 778 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~--i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~ 855 (973)
||||+++++|.++++... ...+++.+++.++.|++.|++|||+. + ++||||||+||+++.++.++++|||++..
T Consensus 87 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~ 162 (271)
T 3kmu_A 87 ITHWMPYGSLYNVLHEGT-NFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFS 162 (271)
T ss_dssp EEECCTTCBHHHHHHSCS-SCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCT
T ss_pred eecccCCCcHHHHHhhcc-cCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceee
Confidence 999999999999997643 23589999999999999999999998 7 99999999999999999999999998765
Q ss_pred ccCCCCcccccccccCcccccccccCCCCC---ccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCC
Q 002069 856 LKLGLSNRTELAGTFGYIAPELAYTMKVTE---KCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRL 932 (973)
Q Consensus 856 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~---~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 932 (973)
... ....||+.|+|||.+.+..++. ++||||||+++|||++|+.||........ ..........+..
T Consensus 163 ~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~ 232 (271)
T 3kmu_A 163 FQS-----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEI-----GMKVALEGLRPTI 232 (271)
T ss_dssp TSC-----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHH-----HHHHHHSCCCCCC
T ss_pred ecc-----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHH-----HHHHHhcCCCCCC
Confidence 332 3356899999999998765544 79999999999999999999974432111 0111111222222
Q ss_pred CCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 933 PTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 933 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
+.. .+..+.+++.+||+.||++|||++++++.|+
T Consensus 233 ~~~------~~~~~~~li~~~l~~~p~~Rps~~~il~~L~ 266 (271)
T 3kmu_A 233 PPG------ISPHVSKLMKICMNEDPAKRPKFDMIVPILE 266 (271)
T ss_dssp CTT------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCC------CCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 222 2335788999999999999999999999875
No 140
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=7.2e-39 Score=351.56 Aligned_cols=257 Identities=22% Similarity=0.378 Sum_probs=209.3
Q ss_pred hcCCcccccccCCCceeEEEEEc------CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcC-CCCceeeeceeeecc
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL------PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKI-RHRNIVKFYGFCSHA 772 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 772 (973)
.++|++.+.||+|+||+||+|.. .+++.||||++..... ....+.+.+|+.+++++ +||||+++++++..+
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 99 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH--LTEREALMSELKVLSYLGNHMNIVNLLGACTIG 99 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC--HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchh--HHHHHHHHHHHHHHhhcccCCCeeeEEEEEecC
Confidence 46899999999999999999963 3578999999975432 23467899999999999 999999999999999
Q ss_pred ceeEEEEEecCCCChHHHhccCcc---------------ccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCe
Q 002069 773 LHSFVVYEYLEMGSLAMILSNDAA---------------AEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNV 837 (973)
Q Consensus 773 ~~~~lv~e~~~~~~L~~~l~~~~~---------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Ni 837 (973)
+..++||||+++|+|.+++..... ...+++.+++.++.|++.|++|||+. +++||||||+||
T Consensus 100 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Ni 176 (313)
T 1t46_A 100 GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNI 176 (313)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGE
T ss_pred CCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceE
Confidence 999999999999999999975542 12589999999999999999999999 999999999999
Q ss_pred eecCCCceEEecccccccccCCCCc--ccccccccCcccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcchhhhhh
Q 002069 838 LLNLEYEAHVSDFGISKFLKLGLSN--RTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSICS 914 (973)
Q Consensus 838 ll~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~ 914 (973)
+++.++.+||+|||.++........ .....+++.|+|||.+.+..++.++||||||+++|||+| |+.||.......
T Consensus 177 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~- 255 (313)
T 1t46_A 177 LLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS- 255 (313)
T ss_dssp EEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH-
T ss_pred EEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh-
Confidence 9999999999999999877654321 233557889999999999899999999999999999999 999997433211
Q ss_pred hhhhhhhhhhhhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 915 SLSSNLNIALDEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
..............+. ..+..+.+++.+||+.||.+|||++++++.|+
T Consensus 256 ----~~~~~~~~~~~~~~~~------~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 303 (313)
T 1t46_A 256 ----KFYKMIKEGFRMLSPE------HAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 303 (313)
T ss_dssp ----HHHHHHHHTCCCCCCT------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ----HHHHHhccCCCCCCcc------cCCHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence 0111111222221111 12345788999999999999999999999875
No 141
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.5e-38 Score=342.60 Aligned_cols=250 Identities=26% Similarity=0.438 Sum_probs=201.4
Q ss_pred hcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVV 778 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 778 (973)
.++|++.+.||+|+||+||+|.. .+++.||||++.............+.+|+.++++++||||+++++++.+.+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 57899999999999999999955 47889999998643222223356789999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccC
Q 002069 779 YEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKL 858 (973)
Q Consensus 779 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 858 (973)
|||+++++|.+++... ..+++..++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.+.....
T Consensus 88 ~e~~~~~~l~~~l~~~---~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~ 161 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPS 161 (279)
T ss_dssp ECCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC--
T ss_pred EecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCCc
Confidence 9999999999998643 3588999999999999999999999 999999999999999999999999999865543
Q ss_pred CCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCCchh
Q 002069 859 GLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLPTPLRN 938 (973)
Q Consensus 859 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 938 (973)
. ......|++.|+|||.+.+..++.++||||+|+++|+|++|+.||........ ...... .....+..
T Consensus 162 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~------~~~~~~-~~~~~~~~--- 229 (279)
T 3fdn_A 162 S--RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET------YKRISR-VEFTFPDF--- 229 (279)
T ss_dssp --------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH------HHHHHH-TCCCCCTT---
T ss_pred c--cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHH------HHHHHh-CCCCCCCc---
Confidence 2 23446789999999999999999999999999999999999999974332110 000111 11112211
Q ss_pred hHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 939 VQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 939 ~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
....+.+++.+||+.||.+|||++|+++.
T Consensus 230 ---~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 230 ---VTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp ---SCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred ---CCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 22346789999999999999999999874
No 142
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1.7e-38 Score=369.40 Aligned_cols=253 Identities=23% Similarity=0.390 Sum_probs=207.7
Q ss_pred hcCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVV 778 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 778 (973)
..+|++.+.||+|+||.||+|.+. +++.||||+++.... ..++|.+|+.++++++||||+++++++.+.+..++|
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 294 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 294 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS----CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc----chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEE
Confidence 467899999999999999999765 588999999975432 257899999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccC
Q 002069 779 YEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKL 858 (973)
Q Consensus 779 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 858 (973)
|||+++|+|.++++... ...+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 295 ~E~~~~g~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 370 (495)
T 1opk_A 295 TEFMTYGNLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTG 370 (495)
T ss_dssp EECCTTCBHHHHHHHSC-TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTT
T ss_pred EEccCCCCHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccC
Confidence 99999999999997543 24588999999999999999999999 999999999999999999999999999987654
Q ss_pred CCC-cccccccccCcccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCCc
Q 002069 859 GLS-NRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSICSSLSSNLNIALDEMLDPRLPTPL 936 (973)
Q Consensus 859 ~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (973)
... ......+++.|+|||++.+..++.++|||||||++|||+| |+.||...... .....+........+.
T Consensus 371 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~------~~~~~~~~~~~~~~~~-- 442 (495)
T 1opk_A 371 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS------QVYELLEKDYRMERPE-- 442 (495)
T ss_dssp CCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG------GHHHHHHTTCCCCCCT--
T ss_pred CceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH------HHHHHHHcCCCCCCCC--
Confidence 322 2233456789999999998899999999999999999999 99998744321 0111111111111111
Q ss_pred hhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 937 RNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 937 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
..+..+.+++.+||+.||.+|||++++++.|+
T Consensus 443 ----~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~ 474 (495)
T 1opk_A 443 ----GCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 474 (495)
T ss_dssp ----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ----CCCHHHHHHHHHHcCcChhHCcCHHHHHHHHH
Confidence 22345788999999999999999999999885
No 143
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1.6e-38 Score=352.53 Aligned_cols=250 Identities=26% Similarity=0.380 Sum_probs=202.7
Q ss_pred hcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVV 778 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 778 (973)
.+.|+..+.||+|+||+||+|.. .+++.||||++...........+.+.+|+.++++++||||+++++++..++..++|
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 35589999999999999999964 58999999999765444445567899999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccC
Q 002069 779 YEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKL 858 (973)
Q Consensus 779 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 858 (973)
|||++ |++.+++... ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 133 ~e~~~-g~l~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 206 (348)
T 1u5q_A 133 MEYCL-GSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 206 (348)
T ss_dssp EECCS-EEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred EecCC-CCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCC
Confidence 99998 6788877533 24689999999999999999999999 999999999999999999999999999986643
Q ss_pred CCCcccccccccCcccccccc---cCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCC
Q 002069 859 GLSNRTELAGTFGYIAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLPTP 935 (973)
Q Consensus 859 ~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 935 (973)
.....||+.|+|||++. +..++.++|||||||++|||++|+.||......... .. ......+....
T Consensus 207 ----~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~-----~~-~~~~~~~~~~~- 275 (348)
T 1u5q_A 207 ----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL-----YH-IAQNESPALQS- 275 (348)
T ss_dssp ----BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH-----HH-HHHSCCCCCCC-
T ss_pred ----CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH-----HH-HHhcCCCCCCC-
Confidence 23457999999999984 567899999999999999999999998743321110 00 11111111111
Q ss_pred chhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 936 LRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 936 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
. ..+..+.+++.+||+.||.+|||++++++.
T Consensus 276 -~---~~~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 276 -G---HWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp -T---TSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred -C---CCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 1 122347789999999999999999999864
No 144
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=2.6e-38 Score=350.17 Aligned_cols=256 Identities=24% Similarity=0.362 Sum_probs=206.4
Q ss_pred hcCCcccccccCCCceeEEEEEc--------CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcC-CCCceeeeceeee
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL--------PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKI-RHRNIVKFYGFCS 770 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~ 770 (973)
.++|++.+.||+|+||+||+|.. .+++.||||++.... .....+.+.+|+.+++++ +||||+++++++.
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 111 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 111 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC--cHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEc
Confidence 47899999999999999999965 356789999997543 233467899999999999 8999999999999
Q ss_pred ccceeEEEEEecCCCChHHHhccCcc-------------ccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCe
Q 002069 771 HALHSFVVYEYLEMGSLAMILSNDAA-------------AEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNV 837 (973)
Q Consensus 771 ~~~~~~lv~e~~~~~~L~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Ni 837 (973)
+.+..++||||+++++|.+++..... ...+++.+++.++.|++.|++|||+. +|+||||||+||
T Consensus 112 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NI 188 (334)
T 2pvf_A 112 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNV 188 (334)
T ss_dssp SSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGE
T ss_pred cCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceE
Confidence 99999999999999999999976542 23489999999999999999999999 999999999999
Q ss_pred eecCCCceEEecccccccccCCCC--cccccccccCcccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcchhhhhh
Q 002069 838 LLNLEYEAHVSDFGISKFLKLGLS--NRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSICS 914 (973)
Q Consensus 838 ll~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~ 914 (973)
+++.++.+||+|||.++....... ......+++.|+|||++.+..++.++||||||+++|||++ |+.||.......
T Consensus 189 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~- 267 (334)
T 2pvf_A 189 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE- 267 (334)
T ss_dssp EECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH-
T ss_pred EEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHH-
Confidence 999999999999999987654322 2233457889999999988889999999999999999999 999997433110
Q ss_pred hhhhhhhhhhhhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 915 SLSSNLNIALDEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
.............+. .....+.+++.+||+.||.+|||++++++.|+
T Consensus 268 -----~~~~~~~~~~~~~~~------~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 314 (334)
T 2pvf_A 268 -----LFKLLKEGHRMDKPA------NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314 (334)
T ss_dssp -----HHHHHHHTCCCCCCT------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -----HHHHHhcCCCCCCCc------cCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 011111111111111 12345788999999999999999999999875
No 145
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.6e-38 Score=350.36 Aligned_cols=253 Identities=22% Similarity=0.385 Sum_probs=197.3
Q ss_pred hcCCcccccccCCCceeEEEEEcC-CCC----EEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccce
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELP-TGE----IVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALH 774 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 774 (973)
.++|++.+.||+|+||+||+|.+. +++ +||+|.+..... ....+.+.+|+.++++++||||+++++++.++.
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~- 90 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS--PKANKEILDEAYVMASVDNPHVCRLLGICLTST- 90 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC---------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccC--HHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-
Confidence 357999999999999999999653 444 368888864332 233578999999999999999999999998764
Q ss_pred eEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccc
Q 002069 775 SFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISK 854 (973)
Q Consensus 775 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~ 854 (973)
.++|+||+++|+|.+++.... ..+++..++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 91 ~~~v~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 165 (327)
T 3poz_A 91 VQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 165 (327)
T ss_dssp EEEEEECCTTCBHHHHHHHST--TSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHH
T ss_pred eEEEEEecCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCccee
Confidence 779999999999999997543 4689999999999999999999999 99999999999999999999999999998
Q ss_pred cccCCCCc--ccccccccCcccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcchhhhhhhhhhhhhhhhhhhcCCC
Q 002069 855 FLKLGLSN--RTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSICSSLSSNLNIALDEMLDPR 931 (973)
Q Consensus 855 ~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (973)
........ .....+|+.|+|||++.+..++.++|||||||++|||+| |+.||+..... .............
T Consensus 166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~------~~~~~~~~~~~~~ 239 (327)
T 3poz_A 166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS------EISSILEKGERLP 239 (327)
T ss_dssp HHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG------GHHHHHHTTCCCC
T ss_pred EccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH------HHHHHHHcCCCCC
Confidence 77544322 233456889999999999999999999999999999999 99999743321 0111111111111
Q ss_pred CCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 932 LPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 932 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
.+. .....+.+++.+||+.||.+||++.++++.|+
T Consensus 240 ~~~------~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~ 274 (327)
T 3poz_A 240 QPP------ICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 274 (327)
T ss_dssp CCT------TBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHH
T ss_pred CCc------cCCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 111 12335788999999999999999999998874
No 146
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=3.2e-38 Score=349.32 Aligned_cols=252 Identities=22% Similarity=0.308 Sum_probs=209.5
Q ss_pred hcCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVV 778 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 778 (973)
.++|.+.+.||+|+||.||+|... +++.||+|++...........+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 468999999999999999999654 6889999998755444445568899999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccC
Q 002069 779 YEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKL 858 (973)
Q Consensus 779 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 858 (973)
|||+++++|.+++... ..+++.+++.++.|++.|++|||++ +|+||||||+||+++.++.+||+|||.++....
T Consensus 120 ~e~~~~~~L~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 193 (335)
T 2owb_A 120 LELCRRRSLLELHKRR---KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY 193 (335)
T ss_dssp ECCCTTCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EecCCCCCHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceeccc
Confidence 9999999999998643 3689999999999999999999999 999999999999999999999999999987765
Q ss_pred CCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCCchh
Q 002069 859 GLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLPTPLRN 938 (973)
Q Consensus 859 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 938 (973)
.........|++.|+|||++.+..++.++||||||+++|||++|+.||......... ...... ...++..
T Consensus 194 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-----~~~~~~--~~~~~~~--- 263 (335)
T 2owb_A 194 DGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY-----LRIKKN--EYSIPKH--- 263 (335)
T ss_dssp TTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH-----HHHHHT--CCCCCTT---
T ss_pred CcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHH-----HHHhcC--CCCCCcc---
Confidence 544555677999999999999988999999999999999999999999743321100 000000 1111211
Q ss_pred hHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 939 VQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 939 ~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
....+.+++.+||+.||.+|||++|+++.
T Consensus 264 ---~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 264 ---INPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp ---SCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ---CCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 12347789999999999999999999863
No 147
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=3.4e-38 Score=340.79 Aligned_cols=254 Identities=20% Similarity=0.273 Sum_probs=203.3
Q ss_pred cCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcc---hhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeE
Q 002069 701 KNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGE---MACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSF 776 (973)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 776 (973)
++|++.+.||+|+||.||+|... +++.||+|+++...... ....+.+.+|+.++++++||||+++++++.++...+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 56999999999999999999665 79999999987543221 123578999999999999999999999999999999
Q ss_pred EEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCC----ceEEecccc
Q 002069 777 VVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEY----EAHVSDFGI 852 (973)
Q Consensus 777 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~----~~kl~Dfg~ 852 (973)
+||||+++++|.+++... ..+++.+++.++.|++.|++|||+. +++||||||+||+++.++ .+||+|||.
T Consensus 85 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~ 158 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEK---ESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGI 158 (283)
T ss_dssp EEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCTT
T ss_pred EEEeecCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEeccc
Confidence 999999999999999643 3689999999999999999999999 999999999999998877 899999999
Q ss_pred cccccCCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCC
Q 002069 853 SKFLKLGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRL 932 (973)
Q Consensus 853 a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 932 (973)
+....... ......|++.|+|||++.+..++.++||||||+++|+|++|+.||...... ...........
T Consensus 159 ~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---------~~~~~~~~~~~ 228 (283)
T 3bhy_A 159 AHKIEAGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ---------ETLTNISAVNY 228 (283)
T ss_dssp CEECC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH---------HHHHHHHTTCC
T ss_pred ceeccCCC-cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchH---------HHHHHhHhccc
Confidence 98765432 234457899999999999889999999999999999999999999754321 11111111111
Q ss_pred CCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 933 PTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 933 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
..........+..+.+++.+||+.||.+|||++++++.
T Consensus 229 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 266 (283)
T 3bhy_A 229 DFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEH 266 (283)
T ss_dssp CCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHC
T ss_pred CCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhC
Confidence 11111112234457899999999999999999999873
No 148
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.7e-38 Score=349.13 Aligned_cols=247 Identities=20% Similarity=0.284 Sum_probs=204.1
Q ss_pred HHhcCCcccccccCCCceeEEEEE-cCCCCEEEEEEcCCCCCcch-----hhHHHHHHHHHHhhcCCCCceeeeceeeec
Q 002069 698 RATKNFDDEHCIGNGGQGSVYKAE-LPTGEIVAVKKFHSPLPGEM-----ACQQEFLNEGNALTKIRHRNIVKFYGFCSH 771 (973)
Q Consensus 698 ~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~ 771 (973)
...++|++.+.||+|+||+||+|. ..+++.||||++........ .....+.+|+.++++++||||+++++++.+
T Consensus 21 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~ 100 (335)
T 3dls_A 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFEN 100 (335)
T ss_dssp HHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred ccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEee
Confidence 346789999999999999999996 45889999999876532211 123467789999999999999999999999
Q ss_pred cceeEEEEEecCCC-ChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecc
Q 002069 772 ALHSFVVYEYLEMG-SLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDF 850 (973)
Q Consensus 772 ~~~~~lv~e~~~~~-~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Df 850 (973)
.+..++||||+.+| +|.+++.... .+++..++.++.|++.|++|||+. +|+||||||+||+++.++.+||+||
T Consensus 101 ~~~~~lv~e~~~~g~~l~~~~~~~~---~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Df 174 (335)
T 3dls_A 101 QGFFQLVMEKHGSGLDLFAFIDRHP---RLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDF 174 (335)
T ss_dssp SSEEEEEEECCTTSCBHHHHHHTCC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCC
T ss_pred CCEEEEEEEeCCCCccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeec
Confidence 99999999999777 9999997543 589999999999999999999999 9999999999999999999999999
Q ss_pred cccccccCCCCcccccccccCcccccccccCCC-CCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcC
Q 002069 851 GISKFLKLGLSNRTELAGTFGYIAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLD 929 (973)
Q Consensus 851 g~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 929 (973)
|.++...... ......||+.|+|||++.+..+ +.++|||||||++|||++|+.||...... ..
T Consensus 175 g~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---------------~~ 238 (335)
T 3dls_A 175 GSAAYLERGK-LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET---------------VE 238 (335)
T ss_dssp TTCEECCTTC-CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG---------------TT
T ss_pred ccceECCCCC-ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH---------------Hh
Confidence 9998775542 3344679999999999988776 78899999999999999999999742211 11
Q ss_pred CCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 930 PRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 930 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
.....+.. .+..+.+++.+||+.||++|||++++++.
T Consensus 239 ~~~~~~~~----~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 239 AAIHPPYL----VSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp TCCCCSSC----CCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred hccCCCcc----cCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11111111 22357889999999999999999999874
No 149
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1.8e-38 Score=365.32 Aligned_cols=252 Identities=24% Similarity=0.393 Sum_probs=200.8
Q ss_pred hcCCcccccccCCCceeEEEEEcCCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELPTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVVY 779 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 779 (973)
.++|++.+.||+|+||.||+|.+.++..||||+++..... .++|.+|+.++++++||||+++++++.+ +..++||
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~ 257 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 257 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSC----HHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCCC----HHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEe
Confidence 4678999999999999999999888888999999864322 4689999999999999999999999976 6789999
Q ss_pred EecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccCC
Q 002069 780 EYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKLG 859 (973)
Q Consensus 780 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 859 (973)
||+++|+|.++++... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 258 e~~~~gsL~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 333 (452)
T 1fmk_A 258 EYMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDN 333 (452)
T ss_dssp CCCTTCBHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC-----
T ss_pred hhhcCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCC
Confidence 9999999999996432 24589999999999999999999999 9999999999999999999999999999876543
Q ss_pred CC-cccccccccCcccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCCch
Q 002069 860 LS-NRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSICSSLSSNLNIALDEMLDPRLPTPLR 937 (973)
Q Consensus 860 ~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 937 (973)
.. ......+++.|+|||.+.+..++.++|||||||++|||++ |+.||....... ....+........+.
T Consensus 334 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~------~~~~i~~~~~~~~~~--- 404 (452)
T 1fmk_A 334 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE------VLDQVERGYRMPCPP--- 404 (452)
T ss_dssp ---------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH------HHHHHHTTCCCCCCT---
T ss_pred ceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHH------HHHHHHcCCCCCCCC---
Confidence 22 2233457889999999998899999999999999999999 999997443210 001111111111111
Q ss_pred hhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 938 NVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 938 ~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
..+..+.+++.+||+.||++|||++++++.|+
T Consensus 405 ---~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~ 436 (452)
T 1fmk_A 405 ---ECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 436 (452)
T ss_dssp ---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ---CCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 22345788999999999999999999999875
No 150
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.2e-38 Score=358.73 Aligned_cols=267 Identities=19% Similarity=0.260 Sum_probs=208.5
Q ss_pred hcCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccc--eeE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHAL--HSF 776 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--~~~ 776 (973)
.++|++.+.||+|+||+||+|... +|+.||||++...... ...+.+.+|++++++++||||+++++++.... ..+
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 85 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL--RPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKV 85 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGG--SCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEecccccc--chHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeE
Confidence 367999999999999999999654 6999999998753222 22577889999999999999999999987654 679
Q ss_pred EEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeee----cCCCceEEecccc
Q 002069 777 VVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLL----NLEYEAHVSDFGI 852 (973)
Q Consensus 777 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill----~~~~~~kl~Dfg~ 852 (973)
+||||+++|+|.++++.......+++.+++.++.|++.|++|||+. +|+||||||+||++ +.++.+||+|||.
T Consensus 86 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~ 162 (396)
T 4eut_A 86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162 (396)
T ss_dssp EEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGG
T ss_pred EEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCC
Confidence 9999999999999998766555589999999999999999999999 99999999999999 7778899999999
Q ss_pred cccccCCCCcccccccccCccccccccc--------CCCCCccchHHHHHHHHHHHhCCCCCcchhhhhh---hhhhhh-
Q 002069 853 SKFLKLGLSNRTELAGTFGYIAPELAYT--------MKVTEKCDVYSFGVLALEVIKGKHPRDFISSICS---SLSSNL- 920 (973)
Q Consensus 853 a~~~~~~~~~~~~~~g~~~y~aPE~~~~--------~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~---~~~~~~- 920 (973)
++..... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ ......
T Consensus 163 a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~ 241 (396)
T 4eut_A 163 ARELEDD-EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT 241 (396)
T ss_dssp CEECCCG-GGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHH
T ss_pred ceEccCC-CccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhc
Confidence 9876543 23345679999999999865 5677899999999999999999999964321110 000000
Q ss_pred ---hhh---hhhh------cCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 921 ---NIA---LDEM------LDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 921 ---~~~---~~~~------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
... .... ....++............+.+++.+||+.||++||+++++++.++
T Consensus 242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~ 305 (396)
T 4eut_A 242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETS 305 (396)
T ss_dssp SCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHH
T ss_pred CCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHH
Confidence 000 0000 001112222223456677889999999999999999999988763
No 151
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=1.1e-38 Score=343.80 Aligned_cols=257 Identities=24% Similarity=0.328 Sum_probs=205.6
Q ss_pred hcCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeee--ccceeE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCS--HALHSF 776 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~--~~~~~~ 776 (973)
.++|++.+.||+|+||.||+|... +++.||+|++...... ....+.+.+|+.++++++||||+++++++. .....+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 83 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMT-EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLY 83 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCC-HHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEE
Confidence 468999999999999999999654 7899999999765433 334678999999999999999999999874 456789
Q ss_pred EEEEecCCCChHHHhccCcc-ccCCCHHHHHHHHHHHHHHHHHHhhCCCCC-----eEeecCCCCCeeecCCCceEEecc
Q 002069 777 VVYEYLEMGSLAMILSNDAA-AEEFGWTKRMNAIKGVADALLYMHTNCFPP-----IVHRDISSKNVLLNLEYEAHVSDF 850 (973)
Q Consensus 777 lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~-----i~H~Dlk~~Nill~~~~~~kl~Df 850 (973)
+||||+++++|.+++..... ...+++.+++.++.|++.|++|||+. + ++||||||+||+++.++.+||+||
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~df 160 (279)
T 2w5a_A 84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDF 160 (279)
T ss_dssp EEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCC
T ss_pred EEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecC
Confidence 99999999999999975432 23589999999999999999999998 7 999999999999999999999999
Q ss_pred cccccccCCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCC
Q 002069 851 GISKFLKLGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDP 930 (973)
Q Consensus 851 g~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 930 (973)
|.++.............|++.|+|||.+.+..++.++||||||+++|+|++|+.||....... ..........+
T Consensus 161 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~~~~i~~~~~~ 234 (279)
T 2w5a_A 161 GLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE------LAGKIREGKFR 234 (279)
T ss_dssp CHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHTCCC
T ss_pred chheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHH------HHHHHhhcccc
Confidence 999876554333344678999999999999899999999999999999999999997543210 01111111111
Q ss_pred CCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 931 RLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 931 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
.++.. .+..+.+++.+||+.||.+|||++|+++.+.
T Consensus 235 ~~~~~------~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 235 RIPYR------YSDELNEIITRMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp CCCTT------SCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred cCCcc------cCHHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence 22211 2345788999999999999999999998764
No 152
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=3.7e-38 Score=343.94 Aligned_cols=263 Identities=21% Similarity=0.331 Sum_probs=204.4
Q ss_pred hcCCcccccccCCCceeEEEEEc-----CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeecc--
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL-----PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHA-- 772 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-- 772 (973)
.+.|++.+.||+|+||.||+|.+ .+++.||||++...... ...+.+.+|+.++++++||||+++++++...
T Consensus 20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 97 (302)
T 4e5w_A 20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGG--NHIADLKKEIEILRNLYHENIVKYKGICTEDGG 97 (302)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---
T ss_pred hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccc--hhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCC
Confidence 35689999999999999999973 47889999999754322 2357899999999999999999999999876
Q ss_pred ceeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccc
Q 002069 773 LHSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGI 852 (973)
Q Consensus 773 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~ 852 (973)
...++||||+++++|.+++.... ..+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.
T Consensus 98 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~ 172 (302)
T 4e5w_A 98 NGIKLIMEFLPSGSLKEYLPKNK--NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGL 172 (302)
T ss_dssp CCEEEEEECCTTCBHHHHHHHHT--TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTT
T ss_pred ceEEEEEEeCCCCcHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECcccc
Confidence 56899999999999999995433 4589999999999999999999999 999999999999999999999999999
Q ss_pred cccccCCCC---cccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhh-----hhh-hhhh
Q 002069 853 SKFLKLGLS---NRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSL-----SSN-LNIA 923 (973)
Q Consensus 853 a~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~-----~~~-~~~~ 923 (973)
++....... ......||..|+|||.+.+..++.++||||+|+++|||+||..|+.......... ... ....
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 252 (302)
T 4e5w_A 173 TKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRL 252 (302)
T ss_dssp CEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHH
T ss_pred cccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHH
Confidence 987765432 2334568888999999999889999999999999999999999975332110000 000 0111
Q ss_pred hhhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 924 LDEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
............. ...+..+.+++.+||+.||.+|||++++++.|+
T Consensus 253 ~~~~~~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~ 298 (302)
T 4e5w_A 253 VNTLKEGKRLPCP---PNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFE 298 (302)
T ss_dssp HHHHHTTCCCCCC---TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHhccCCCCCC---CCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Confidence 1111111111111 122345789999999999999999999999885
No 153
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.1e-39 Score=356.16 Aligned_cols=258 Identities=23% Similarity=0.358 Sum_probs=188.2
Q ss_pred hcCCcccccccCCCceeEEEEEcCCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhc--CCCCceeeeceeeeccc----
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELPTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTK--IRHRNIVKFYGFCSHAL---- 773 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~~~---- 773 (973)
.++|++.+.||+|+||+||+|.. +++.||||++... ....+..|.+++.. ++||||+++++++....
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 74 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR------EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT 74 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-C-TTSCEEEEECC-T------THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSE
T ss_pred cceeeehhhccCCCCeEEEEEEE-cCcceEEEEeccc------chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccc
Confidence 36799999999999999999987 5899999998642 13567778888877 79999999999998766
Q ss_pred eeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHh--------hCCCCCeEeecCCCCCeeecCCCce
Q 002069 774 HSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMH--------TNCFPPIVHRDISSKNVLLNLEYEA 845 (973)
Q Consensus 774 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH--------~~~~~~i~H~Dlk~~Nill~~~~~~ 845 (973)
..++||||+++|+|.++++.. .+++.+++.++.|++.|++||| +. +|+||||||+||+++.++.+
T Consensus 75 ~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~ 147 (303)
T 3gxj_A 75 QLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTC 147 (303)
T ss_dssp EEEEEEECCTTCCHHHHHHHC----CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC
T ss_pred eeEEEEeccCCCCHHHHHhcc----CcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCE
Confidence 789999999999999999643 4677889999999999999999 77 99999999999999999999
Q ss_pred EEecccccccccCCCCc----ccccccccCcccccccccC------CCCCccchHHHHHHHHHHHhC----------CCC
Q 002069 846 HVSDFGISKFLKLGLSN----RTELAGTFGYIAPELAYTM------KVTEKCDVYSFGVLALEVIKG----------KHP 905 (973)
Q Consensus 846 kl~Dfg~a~~~~~~~~~----~~~~~g~~~y~aPE~~~~~------~~~~~~Dv~slG~~l~el~tg----------~~p 905 (973)
||+|||+++........ .....||+.|+|||++.+. .++.++|||||||++|||+|| +.|
T Consensus 148 kl~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p 227 (303)
T 3gxj_A 148 CIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 227 (303)
T ss_dssp -BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCT
T ss_pred EEeecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeecc
Confidence 99999999876544322 2334799999999998776 344689999999999999999 555
Q ss_pred CcchhhhhhhhhhhhhhhhhhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 906 RDFISSICSSLSSNLNIALDEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
|.......................+.++..+. .......+.+++.+||+.||.+|||++++++.|+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~ 293 (303)
T 3gxj_A 228 YYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQ-SCEALRVMAKIMRECWYANGAARLTALRIKKTLS 293 (303)
T ss_dssp TTTTCC-CCCCC-CHHHHTTSCCCCCCCGGGG-SSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHH
T ss_pred ccccCCCCccHHHHHHHHHHhhcCCCcccccc-chhhHHHHHHHHHHHhccCcccCCCHHHHHHHHH
Confidence 54322111111111111222223333333222 2245667899999999999999999999999885
No 154
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=4.3e-38 Score=356.15 Aligned_cols=265 Identities=19% Similarity=0.234 Sum_probs=204.6
Q ss_pred hcCCcccccccCC--CceeEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeE
Q 002069 700 TKNFDDEHCIGNG--GQGSVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSF 776 (973)
Q Consensus 700 ~~~~~~~~~lg~G--~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 776 (973)
.++|++.+.||+| +||+||+|... +++.||||++...... ....+.+.+|+.++++++|||||++++++.+++..+
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 102 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACS-NEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW 102 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccC-hHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEE
Confidence 4689999999999 99999999664 7999999999754332 344678889999999999999999999999999999
Q ss_pred EEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccc
Q 002069 777 VVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFL 856 (973)
Q Consensus 777 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~ 856 (973)
+||||+++++|.+++.... ...+++..+..++.||+.|++|||+. +|+||||||+||+++.++.+||+|||.+...
T Consensus 103 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~ 178 (389)
T 3gni_B 103 VVTSFMAYGSAKDLICTHF-MDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSM 178 (389)
T ss_dssp EEEECCTTCBHHHHHHHTC-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEEEccCCCCHHHHHhhhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceee
Confidence 9999999999999997543 23589999999999999999999999 9999999999999999999999999998654
Q ss_pred cCCC-------CcccccccccCccccccccc--CCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhh
Q 002069 857 KLGL-------SNRTELAGTFGYIAPELAYT--MKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEM 927 (973)
Q Consensus 857 ~~~~-------~~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 927 (973)
.... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||........... .........
T Consensus 179 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~-~~~~~~~~~ 257 (389)
T 3gni_B 179 ISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLE-KLNGTVPCL 257 (389)
T ss_dssp EETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHH-C--------
T ss_pred ccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH-HhcCCCCcc
Confidence 3221 11223478999999999987 5789999999999999999999999975332111000 000000000
Q ss_pred cCC---------------------------CC-------CCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 928 LDP---------------------------RL-------PTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 928 ~~~---------------------------~~-------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
.+. .. .............+.+++.+||+.||.+|||++|+++.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 258 LDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp ------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 000 00 00000111233568899999999999999999999864
No 155
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=3e-39 Score=364.39 Aligned_cols=262 Identities=22% Similarity=0.207 Sum_probs=204.6
Q ss_pred HHHHHhcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccc
Q 002069 695 EIIRATKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHAL 773 (973)
Q Consensus 695 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 773 (973)
+.....++|++.+.||+|+||+||+|+. .+|+.||||++...........+.+.+|..++..++||||+++++++.+++
T Consensus 55 ~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~ 134 (412)
T 2vd5_A 55 EVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDEN 134 (412)
T ss_dssp HHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSS
T ss_pred hccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCC
Confidence 3444568899999999999999999966 479999999986422111222345788999999999999999999999999
Q ss_pred eeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEeccccc
Q 002069 774 HSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGIS 853 (973)
Q Consensus 774 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a 853 (973)
..|+||||+++|+|.+++.+.. ..+++..++.++.||+.|++|||+. +|+||||||+||+++.++++||+|||++
T Consensus 135 ~~~lVmE~~~gg~L~~~l~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DFGla 209 (412)
T 2vd5_A 135 YLYLVMEYYVGGDLLTLLSKFG--ERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADFGSC 209 (412)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred EEEEEEcCCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeechhh
Confidence 9999999999999999997532 3689999999999999999999999 9999999999999999999999999999
Q ss_pred ccccCCCC-cccccccccCcccccccc-------cCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhh
Q 002069 854 KFLKLGLS-NRTELAGTFGYIAPELAY-------TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALD 925 (973)
Q Consensus 854 ~~~~~~~~-~~~~~~g~~~y~aPE~~~-------~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 925 (973)
+....... ......||+.|+|||++. +..++.++|||||||++|||++|+.||........ ......
T Consensus 210 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~-----~~~i~~ 284 (412)
T 2vd5_A 210 LKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAET-----YGKIVH 284 (412)
T ss_dssp EECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-----HHHHHT
T ss_pred eeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHH-----HHHHHh
Confidence 87755433 223467999999999987 35689999999999999999999999975432110 011111
Q ss_pred hhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCC---CCHHHHHHH
Q 002069 926 EMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSR---PTMQKVSQL 970 (973)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---Ps~~ev~~~ 970 (973)
......++... ...+..+.++|.+||. +|.+| |+++|++++
T Consensus 285 ~~~~~~~p~~~---~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 285 YKEHLSLPLVD---EGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp HHHHCCCC-------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred cccCcCCCccc---cCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 00001111100 1123457789999999 99998 689998763
No 156
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=8.8e-38 Score=364.09 Aligned_cols=321 Identities=21% Similarity=0.205 Sum_probs=215.4
Q ss_pred cEEeCCCCCCCCCCCcccCCCCCCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCC
Q 002069 3 KVLGLSFNQFSGSIPPEIGHLTHLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNN 82 (973)
Q Consensus 3 ~~L~l~~~~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n 82 (973)
+.++.++++++ .+|..+. +++++|+|++|++++..|..|..+++|++|+|++|.+++..|.+|+++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 14 RAVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp TEEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 35666777776 6776553 56777777777777666667777777777777777777656677777777777777777
Q ss_pred cCcccCCccccCccccceeeccCCcCCCCCCCccccCCccceeecccccccccCcccccccCCCCceecccCCCCCCCCc
Q 002069 83 LLSGSIPNEVGSLKSLSDLRLSNNSLNGSIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSGAIPF 162 (973)
Q Consensus 83 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 162 (973)
++++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|.+++..|..|.++++|++|++++|.+++..+.
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 170 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTE 170 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHH
T ss_pred cCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChh
Confidence 77643334566777777777777777766666677777777777777777666666677777777777777777655555
Q ss_pred cccCccccceeeecccccCCCCCccccccCccceeeccccccccccccccCCCCcccEEecCCcccCCCCCccccccccc
Q 002069 163 SLGNLTNLVTLYIGINALSGSIPNEIGNLKSLSDLRLDYNTLSGSILYSFGNLTKLEILYLDVNALSGLIPNEIGNLKSL 242 (973)
Q Consensus 163 ~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L 242 (973)
.|..+++|+.|++++|.+.+..+..|..+++|++|++++|...+..+.......+|+.|++++|+++.+.+..|..+++|
T Consensus 171 ~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L 250 (477)
T 2id5_A 171 ALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYL 250 (477)
T ss_dssp HHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTC
T ss_pred HhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCcccc
Confidence 66666677777777666665555566666666666666665554444444444466666666666665544556666666
Q ss_pred cceecccccccCCCCcccCCcchhhhccCCCcccCchhhhhhccccccceEEcccccccCCcCchhhcCCccceeecccc
Q 002069 243 LALQLNYNTLSGSIPCSFGNLTKLVISCLGTNALSSSILEEIGNLKSLLHLQLNYNTLSGSIPLSLGSLTNLATLYFSTN 322 (973)
Q Consensus 243 ~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n 322 (973)
+.|+|++|.+++..+ ..|.++++|+.|++++|++++..|..|..+++|+.|++++|
T Consensus 251 ~~L~Ls~n~l~~~~~------------------------~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 306 (477)
T 2id5_A 251 RFLNLSYNPISTIEG------------------------SMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGN 306 (477)
T ss_dssp CEEECCSSCCCEECT------------------------TSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSS
T ss_pred CeeECCCCcCCccCh------------------------hhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCC
Confidence 666666666654444 44555666677777777777666777777777777777777
Q ss_pred ccCCCCCccccCCCCCCcEEcCCCCCCC
Q 002069 323 ALSGSIPNEITNLRSLSDLQLSENTLNG 350 (973)
Q Consensus 323 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 350 (973)
.+++..+..|..+++|++|+|++|.+..
T Consensus 307 ~l~~~~~~~~~~l~~L~~L~l~~N~l~c 334 (477)
T 2id5_A 307 QLTTLEESVFHSVGNLETLILDSNPLAC 334 (477)
T ss_dssp CCSCCCGGGBSCGGGCCEEECCSSCEEC
T ss_pred cCceeCHhHcCCCcccCEEEccCCCccC
Confidence 7776666667777777777777777653
No 157
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=1.9e-38 Score=369.78 Aligned_cols=254 Identities=25% Similarity=0.351 Sum_probs=209.3
Q ss_pred hcCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVV 778 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 778 (973)
.++|++.+.||+|+||+||+|... +++.||||++...........+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 467999999999999999999654 8999999998765443344468899999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeee---cCCCceEEeccccccc
Q 002069 779 YEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLL---NLEYEAHVSDFGISKF 855 (973)
Q Consensus 779 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill---~~~~~~kl~Dfg~a~~ 855 (973)
|||+++++|.+++.... .+++.++..++.|++.|++|||++ +|+||||||+||++ +.++.+||+|||+++.
T Consensus 105 ~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 178 (484)
T 3nyv_A 105 GEVYTGGELFDEIISRK---RFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTH 178 (484)
T ss_dssp ECCCCSCBHHHHHHTCS---CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHH
T ss_pred EecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEE
Confidence 99999999999986543 588999999999999999999999 99999999999999 5678999999999987
Q ss_pred ccCCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCC
Q 002069 856 LKLGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLPTP 935 (973)
Q Consensus 856 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 935 (973)
+... .......||+.|+|||++.+ .++.++||||+||++|+|++|+.||...... .....+........
T Consensus 179 ~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---------~~~~~i~~~~~~~~ 247 (484)
T 3nyv_A 179 FEAS-KKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEY---------DILKKVEKGKYTFE 247 (484)
T ss_dssp BCCC-CSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---------HHHHHHHHCCCCCC
T ss_pred cccc-cccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHH---------HHHHHHHcCCCCCC
Confidence 7544 23345679999999999876 6899999999999999999999999754321 11112222222222
Q ss_pred chhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 936 LRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 936 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
...+...+..+.+++.+||+.||.+|||++|+++.
T Consensus 248 ~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 248 LPQWKKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp SGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 22223344567899999999999999999999864
No 158
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.1e-38 Score=349.68 Aligned_cols=252 Identities=22% Similarity=0.328 Sum_probs=197.4
Q ss_pred hcCCcccccccCCCceeEEEEEcCCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCC--CceeeeceeeeccceeEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELPTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRH--RNIVKFYGFCSHALHSFV 777 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~~~~~~~~~~~~~l 777 (973)
.++|++.+.||+|+||.||+|...+++.||||++...... ....+.+.+|+.++++++| +||+++++++..+...++
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 86 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEAD-NQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 86 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccc-hHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEE
Confidence 4679999999999999999998888999999998755332 3345789999999999976 999999999999999999
Q ss_pred EEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEeccccccccc
Q 002069 778 VYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLK 857 (973)
Q Consensus 778 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 857 (973)
||| +.+++|.+++... ..+++.++..++.|++.|++|||+. +|+||||||+||+++ ++.+||+|||+++...
T Consensus 87 v~e-~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~ 158 (343)
T 3dbq_A 87 VME-CGNIDLNSWLKKK---KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 158 (343)
T ss_dssp EEC-CCSEEHHHHHHHS---CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-
T ss_pred EEe-CCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccC
Confidence 999 5678999999754 3688999999999999999999999 999999999999997 6889999999998775
Q ss_pred CCCC--cccccccccCccccccccc-----------CCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhh
Q 002069 858 LGLS--NRTELAGTFGYIAPELAYT-----------MKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIAL 924 (973)
Q Consensus 858 ~~~~--~~~~~~g~~~y~aPE~~~~-----------~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~ 924 (973)
.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ ..
T Consensus 159 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~--------~~ 230 (343)
T 3dbq_A 159 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS--------KL 230 (343)
T ss_dssp -----------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHH--------HH
T ss_pred cccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHH--------HH
Confidence 4432 2335679999999999864 6688899999999999999999999974322111 11
Q ss_pred hhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 925 DEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
...+++........ .....+.+++.+||+.||.+|||++|+++.
T Consensus 231 ~~~~~~~~~~~~~~--~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 231 HAIIDPNHEIEFPD--IPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp HHHHCTTSCCCCCC--CSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHhcCCcccCCcc--cCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 11222211111111 012347789999999999999999999864
No 159
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.8e-38 Score=345.76 Aligned_cols=257 Identities=18% Similarity=0.222 Sum_probs=204.3
Q ss_pred hcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcC-CCCceeeeceeeeccceeEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKI-RHRNIVKFYGFCSHALHSFV 777 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~l 777 (973)
.++|++.+.||+|+||.||+|.. .+++.||||++..... .+.+.+|+.+++.+ +|++++++++++.+....++
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~l 83 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD-----APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVL 83 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT-----SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc-----cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEE
Confidence 46799999999999999999964 5899999999865432 24577899999999 89999999999999999999
Q ss_pred EEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCc-----eEEecccc
Q 002069 778 VYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYE-----AHVSDFGI 852 (973)
Q Consensus 778 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~-----~kl~Dfg~ 852 (973)
||||+ +++|.++++... ..+++.+++.++.|++.|++|||+. +|+||||||+||+++.++. +||+|||.
T Consensus 84 v~e~~-~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~ 157 (298)
T 1csn_A 84 VIDLL-GPSLEDLLDLCG--RKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGM 157 (298)
T ss_dssp EEECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTT
T ss_pred EEEec-CCCHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECcc
Confidence 99999 999999997543 3589999999999999999999999 9999999999999987776 99999999
Q ss_pred cccccCCCC-------cccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhh
Q 002069 853 SKFLKLGLS-------NRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALD 925 (973)
Q Consensus 853 a~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 925 (973)
++....... ......||+.|+|||++.+..++.++||||||+++|||++|+.||......... ........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~--~~~~~~~~ 235 (298)
T 1csn_A 158 VKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNK--QKYERIGE 235 (298)
T ss_dssp CEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHH--HHHHHHHH
T ss_pred ccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccH--HHHHHHHh
Confidence 987765422 234567999999999999999999999999999999999999999753211000 00000000
Q ss_pred hhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 926 EMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
....... .......+..+.+++.+||+.||.+||++++|++.|+
T Consensus 236 ~~~~~~~---~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~ 279 (298)
T 1csn_A 236 KKQSTPL---RELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFS 279 (298)
T ss_dssp HHHHSCH---HHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHH
T ss_pred hccCccH---HHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHH
Confidence 0000000 0000112346789999999999999999999999874
No 160
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=3.9e-38 Score=356.21 Aligned_cols=253 Identities=21% Similarity=0.244 Sum_probs=190.5
Q ss_pred hcCCccc-ccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhh-cCCCCceeeeceeeec----c
Q 002069 700 TKNFDDE-HCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALT-KIRHRNIVKFYGFCSH----A 772 (973)
Q Consensus 700 ~~~~~~~-~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~-~l~h~niv~~~~~~~~----~ 772 (973)
.++|.+. +.||+|+||+||+|.. .+++.||||++... ..+.+|+.++. ..+||||+++++++.. .
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~--------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~ 131 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLYAGR 131 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc--------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCC
Confidence 3567776 6899999999999965 47899999998631 45667887764 4589999999998865 5
Q ss_pred ceeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecC---CCceEEec
Q 002069 773 LHSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNL---EYEAHVSD 849 (973)
Q Consensus 773 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~---~~~~kl~D 849 (973)
...|+||||+++|+|.+++.... ...+++.++..++.||+.||+|||+. +|+||||||+||+++. ++.+||+|
T Consensus 132 ~~~~lv~E~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~D 207 (400)
T 1nxk_A 132 KCLLIVMECLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTD 207 (400)
T ss_dssp EEEEEEEECCCSEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECC
T ss_pred cEEEEEEEeCCCCcHHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEe
Confidence 67899999999999999997643 24589999999999999999999999 9999999999999998 78999999
Q ss_pred ccccccccCCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcC
Q 002069 850 FGISKFLKLGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLD 929 (973)
Q Consensus 850 fg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 929 (973)
||+++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||......... . ........
T Consensus 208 FG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~--~---~~~~~i~~ 281 (400)
T 1nxk_A 208 FGFAKETTSH-NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS--P---GMKTRIRM 281 (400)
T ss_dssp CTTCEECC------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSC--C---SHHHHHHH
T ss_pred cccccccCCC-CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCcccccc--H---HHHHHHHc
Confidence 9999866533 2234567899999999999999999999999999999999999999743321100 0 00001111
Q ss_pred CCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 930 PRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 930 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
..+......+...+..+.+++.+||+.||.+|||++|+++.
T Consensus 282 ~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 282 GQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp TCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CcccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 11111111112233457899999999999999999999874
No 161
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=6.4e-38 Score=339.45 Aligned_cols=257 Identities=26% Similarity=0.406 Sum_probs=194.2
Q ss_pred hcCCcccccccCCCceeEEEEEcCCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELPTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVVY 779 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 779 (973)
.++|++.+.||+|+||+||+|... ..||||+++..... ....+.+.+|+.++++++||||+++++++. ....++||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~ 98 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPT-PQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAIVT 98 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCC-HHHHHHHHHHHHHHHhCCCCcEEEEEeecc-CCccEEEE
Confidence 468999999999999999999864 36999999765433 344678999999999999999999999764 45689999
Q ss_pred EecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccCC
Q 002069 780 EYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKLG 859 (973)
Q Consensus 780 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 859 (973)
||+++++|.+++.... ..+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.++.....
T Consensus 99 e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 173 (289)
T 3og7_A 99 QWCEGSSLYHHLHASE--TKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRW 173 (289)
T ss_dssp ECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC--------
T ss_pred EecCCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceeccccccc
Confidence 9999999999996543 4689999999999999999999999 9999999999999999999999999999865432
Q ss_pred --CCcccccccccCcccccccc---cCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCC
Q 002069 860 --LSNRTELAGTFGYIAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLPT 934 (973)
Q Consensus 860 --~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 934 (973)
........||+.|+|||.+. +..++.++||||+|+++|||++|+.||.......... .........+....
T Consensus 174 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~----~~~~~~~~~~~~~~ 249 (289)
T 3og7_A 174 SGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII----EMVGRGSLSPDLSK 249 (289)
T ss_dssp ----------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHH----HHHHHTSCCCCTTS
T ss_pred cccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHH----HHhcccccCcchhh
Confidence 12234467899999999986 5678889999999999999999999997543211110 01111111121111
Q ss_pred CchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 935 PLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 935 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
.. ...+..+.+++.+||+.||.+|||++++++.|+
T Consensus 250 ~~---~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~ 284 (289)
T 3og7_A 250 VR---SNCPKRMKRLMAECLKKKRDERPSFPRILAEIE 284 (289)
T ss_dssp SC---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cc---ccCCHHHHHHHHHHccCChhhCCCHHHHHHHHH
Confidence 11 122345789999999999999999999999885
No 162
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=2.4e-38 Score=341.97 Aligned_cols=254 Identities=23% Similarity=0.325 Sum_probs=198.0
Q ss_pred hcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVV 778 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 778 (973)
.++|++.+.||+|+||+||+|.. .+++.||+|++...... ...+.+.+|++++++++||||+++++++.+....++|
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 98 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQ--VPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIV 98 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCC--SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccc--hhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEE
Confidence 46799999999999999999965 47899999998754322 2257899999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccCc-cccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeee---cCCCceEEecccccc
Q 002069 779 YEYLEMGSLAMILSNDA-AAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLL---NLEYEAHVSDFGISK 854 (973)
Q Consensus 779 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill---~~~~~~kl~Dfg~a~ 854 (973)
|||+++++|.+++.... ....+++..++.++.|++.|++|||+. +|+||||||+||++ +.++.+||+|||.++
T Consensus 99 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~ 175 (285)
T 3is5_A 99 METCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAE 175 (285)
T ss_dssp ECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCC
T ss_pred EEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecce
Confidence 99999999999985432 234689999999999999999999999 99999999999999 455889999999998
Q ss_pred cccCCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCC
Q 002069 855 FLKLGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLPT 934 (973)
Q Consensus 855 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 934 (973)
..... .......|++.|+|||++. ..++.++||||+|+++|||++|+.||......... .. .....+....
T Consensus 176 ~~~~~-~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~-----~~--~~~~~~~~~~ 246 (285)
T 3is5_A 176 LFKSD-EHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQ-----QK--ATYKEPNYAV 246 (285)
T ss_dssp C-----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-----HH--HHHCCCCCCC
T ss_pred ecCCc-ccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHH-----hh--hccCCccccc
Confidence 76543 2334567999999999876 46889999999999999999999999754321100 00 0111111111
Q ss_pred CchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 935 PLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 935 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
.... ....+.+++.+||+.||.+|||++|+++.
T Consensus 247 ~~~~---~~~~~~~li~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 247 ECRP---LTPQAVDLLKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp --CC---CCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred ccCc---CCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1111 12356789999999999999999999863
No 163
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=1.1e-37 Score=358.98 Aligned_cols=260 Identities=20% Similarity=0.281 Sum_probs=196.6
Q ss_pred hcCCcccccccCCCceeEEEEE-cCCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeecc------
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAE-LPTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHA------ 772 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------ 772 (973)
.++|++.+.||+|+||+||+|. ..+++.||||++..... .....+.+.+|+.+++.++||||+++++++...
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 139 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF 139 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGG-SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECcccc-ChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence 4689999999999999999995 45789999999975422 334467889999999999999999999999654
Q ss_pred ceeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccc
Q 002069 773 LHSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGI 852 (973)
Q Consensus 773 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~ 852 (973)
...|+||||++++ +.+.+.. .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 140 ~~~~lv~E~~~~~-l~~~~~~-----~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~ 210 (464)
T 3ttj_A 140 QDVYLVMELMDAN-LCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 210 (464)
T ss_dssp CEEEEEEECCSEE-HHHHHTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCC
T ss_pred CeEEEEEeCCCCC-HHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEe
Confidence 3569999999864 6666542 378999999999999999999999 999999999999999999999999999
Q ss_pred cccccCCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhh------hh-------hh
Q 002069 853 SKFLKLGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSS------LS-------SN 919 (973)
Q Consensus 853 a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~------~~-------~~ 919 (973)
|+..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||......... .+ ..
T Consensus 211 a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~ 289 (464)
T 3ttj_A 211 ARTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 289 (464)
T ss_dssp C-----C-CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTT
T ss_pred eeecCCC-cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence 9876543 2344568999999999999999999999999999999999999999754321110 00 00
Q ss_pred hhhhhhhhcCCC----------------CCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 920 LNIALDEMLDPR----------------LPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 920 ~~~~~~~~~~~~----------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
............ .+............+.+++.+||+.||++|||++|+++.
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 290 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp SCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000011111100 001111112235668899999999999999999999874
No 164
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=9.1e-39 Score=370.46 Aligned_cols=258 Identities=22% Similarity=0.294 Sum_probs=207.1
Q ss_pred hcCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVV 778 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 778 (973)
.++|++.+.||+|+||.||+|+.. +|+.||+|++.............+.+|+.++++++||||+++++++.+....|+|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 367999999999999999999764 7999999998643222222346788999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccCcc-ccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEeccccccccc
Q 002069 779 YEYLEMGSLAMILSNDAA-AEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLK 857 (973)
Q Consensus 779 ~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 857 (973)
|||+++|+|.+++..... ...+++..++.++.||+.|++|||+. +|+||||||+||+++.+|.+||+|||+++...
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 999999999999975442 34689999999999999999999999 99999999999999999999999999998876
Q ss_pred CCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCCch
Q 002069 858 LGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLPTPLR 937 (973)
Q Consensus 858 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 937 (973)
..........||+.|+|||++.+..++.++||||+||++|||++|+.||........ ...............+
T Consensus 341 ~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~-----~~~~~~~i~~~~~~~p-- 413 (543)
T 3c4z_A 341 AGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE-----NKELKQRVLEQAVTYP-- 413 (543)
T ss_dssp TTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCC-----HHHHHHHHHHCCCCCC--
T ss_pred CCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchh-----HHHHHHHHhhcccCCC--
Confidence 554444556899999999999999999999999999999999999999975321000 0111111111111111
Q ss_pred hhHHHHHHHHHHHhcccCCCCCCCCCH-----HHHHH
Q 002069 938 NVQDKLISIMEVSISCLDESPTSRPTM-----QKVSQ 969 (973)
Q Consensus 938 ~~~~~~~~l~~li~~cl~~dP~~RPs~-----~ev~~ 969 (973)
...+..+.+++.+||+.||.+||++ +++.+
T Consensus 414 --~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 414 --DKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp --TTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred --cccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 1123357789999999999999975 56654
No 165
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=2.9e-38 Score=353.90 Aligned_cols=261 Identities=21% Similarity=0.233 Sum_probs=202.9
Q ss_pred HHhcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCC-----CCceeeeceeeec
Q 002069 698 RATKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIR-----HRNIVKFYGFCSH 771 (973)
Q Consensus 698 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-----h~niv~~~~~~~~ 771 (973)
...++|++.+.||+|+||+||+|.. .+++.||||++... ......+..|+.+++.++ ||||+++++++..
T Consensus 32 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~ 107 (360)
T 3llt_A 32 LLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI----KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMY 107 (360)
T ss_dssp EETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC----HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEE
T ss_pred EecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc----hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeE
Confidence 3457899999999999999999965 57899999998632 233567788999999886 9999999999999
Q ss_pred cceeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecC----------
Q 002069 772 ALHSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNL---------- 841 (973)
Q Consensus 772 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~---------- 841 (973)
.+..++||||+ +++|.+++..... ..+++.+++.++.||+.||+|||+. +|+||||||+||+++.
T Consensus 108 ~~~~~lv~e~~-~~~L~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~~~~ 182 (360)
T 3llt_A 108 YDHMCLIFEPL-GPSLYEIITRNNY-NGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFEKSLITV 182 (360)
T ss_dssp TTEEEEEECCC-CCBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCCEEEEEE
T ss_pred CCeeEEEEcCC-CCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccccccccch
Confidence 99999999999 8999999975542 3589999999999999999999999 9999999999999975
Q ss_pred ---------------CCceEEecccccccccCCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCC
Q 002069 842 ---------------EYEAHVSDFGISKFLKLGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPR 906 (973)
Q Consensus 842 ---------------~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~ 906 (973)
++.+||+|||.++.... ......||+.|+|||++.+..++.++||||+||++|||++|+.||
T Consensus 183 ~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf 259 (360)
T 3llt_A 183 RRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD---YHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLF 259 (360)
T ss_dssp ECTTTCCEEEEEEESCCCEEECCCTTCEETTS---CCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSC
T ss_pred hcccccccccccccCCCCEEEEeccCceecCC---CCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCC
Confidence 78999999999986543 234567899999999999999999999999999999999999999
Q ss_pred cchhhhhh------hhhhhhhhhhh--------hhc-----CCCCCCCchhhH--------------HHHHHHHHHHhcc
Q 002069 907 DFISSICS------SLSSNLNIALD--------EML-----DPRLPTPLRNVQ--------------DKLISIMEVSISC 953 (973)
Q Consensus 907 ~~~~~~~~------~~~~~~~~~~~--------~~~-----~~~~~~~~~~~~--------------~~~~~l~~li~~c 953 (973)
........ ........... ... ....+....... .....+.+++.+|
T Consensus 260 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~ 339 (360)
T 3llt_A 260 RTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSI 339 (360)
T ss_dssp CCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHH
Confidence 75332110 00000000000 000 000011100000 0114577999999
Q ss_pred cCCCCCCCCCHHHHHHH
Q 002069 954 LDESPTSRPTMQKVSQL 970 (973)
Q Consensus 954 l~~dP~~RPs~~ev~~~ 970 (973)
|+.||++|||++|+++.
T Consensus 340 L~~dP~~Rpta~elL~h 356 (360)
T 3llt_A 340 LQIDPTLRPSPAELLKH 356 (360)
T ss_dssp CCSSGGGSCCHHHHTTS
T ss_pred hcCChhhCCCHHHHhcC
Confidence 99999999999999864
No 166
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.2e-38 Score=345.16 Aligned_cols=254 Identities=24% Similarity=0.394 Sum_probs=208.9
Q ss_pred HhcCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEE
Q 002069 699 ATKNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFV 777 (973)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 777 (973)
...+|++.+.||+|+||+||+|.+. +++.||+|++.... ...+.+.+|+.++++++||||+++++++.+++..++
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 86 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS----THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH----HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEE
Confidence 4578999999999999999999664 58899999997532 235789999999999999999999999999999999
Q ss_pred EEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEeccccccccc
Q 002069 778 VYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLK 857 (973)
Q Consensus 778 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 857 (973)
||||+++++|.++++... ...+++..++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.+....
T Consensus 87 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~ 162 (288)
T 3kfa_A 87 ITEFMTYGNLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT 162 (288)
T ss_dssp EEECCTTEEHHHHHHHCC-TTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSC
T ss_pred EEEcCCCCcHHHHHHhcc-cCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceecc
Confidence 999999999999997543 34589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCC-cccccccccCcccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCC
Q 002069 858 LGLS-NRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSICSSLSSNLNIALDEMLDPRLPTP 935 (973)
Q Consensus 858 ~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 935 (973)
.... ......+++.|+|||.+.+..++.++||||+|+++|+|++ |..||...... ..............+.
T Consensus 163 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~------~~~~~~~~~~~~~~~~- 235 (288)
T 3kfa_A 163 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS------QVYELLEKDYRMERPE- 235 (288)
T ss_dssp SSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG------GHHHHHHTTCCCCCCT-
T ss_pred CCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH------HHHHHHhccCCCCCCC-
Confidence 4432 2233557889999999998899999999999999999999 99998743311 0111111111112121
Q ss_pred chhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 936 LRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 936 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
..+..+.+++.+|++.||.+|||++++++.|+
T Consensus 236 -----~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~ 267 (288)
T 3kfa_A 236 -----GCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267 (288)
T ss_dssp -----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -----CCCHHHHHHHHHHhCCChhhCcCHHHHHHHHH
Confidence 12345789999999999999999999999875
No 167
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.3e-38 Score=356.69 Aligned_cols=262 Identities=18% Similarity=0.219 Sum_probs=199.2
Q ss_pred hcCCcccccccCCCceeEEEEEcCC------CCEEEEEEcCCCCCcchh--------hHHHHHHHHHHhhcCCCCceeee
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELPT------GEIVAVKKFHSPLPGEMA--------CQQEFLNEGNALTKIRHRNIVKF 765 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~~~~~--------~~~~~~~e~~~l~~l~h~niv~~ 765 (973)
.++|++.+.||+|+||+||+|.+.. ++.||||++......... ....+..|+..+..++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4689999999999999999997654 478999998754321111 01234456667788899999999
Q ss_pred ceeeecc----ceeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeec-
Q 002069 766 YGFCSHA----LHSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLN- 840 (973)
Q Consensus 766 ~~~~~~~----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~- 840 (973)
++++... ...++||||+ +++|.++++... ..+++.+++.++.||+.||+|||+. +|+||||||+||+++
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~~ 187 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANA--KRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNY 187 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEES
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEec
Confidence 9998764 4579999999 999999997542 4689999999999999999999999 999999999999999
Q ss_pred -CCCceEEecccccccccCCCC-------cccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhh
Q 002069 841 -LEYEAHVSDFGISKFLKLGLS-------NRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSI 912 (973)
Q Consensus 841 -~~~~~kl~Dfg~a~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~ 912 (973)
.++.+||+|||+++.+..... ......||+.|+|||++.+..++.++|||||||++|||+||+.||......
T Consensus 188 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~ 267 (364)
T 3op5_A 188 KNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD 267 (364)
T ss_dssp SCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred CCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccC
Confidence 889999999999987654321 113355999999999999999999999999999999999999999853211
Q ss_pred hhh---hhhhhhhhhhhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 913 CSS---LSSNLNIALDEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 913 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
... .............++.++. ...+..+.+++..||+.||.+||+++++++.|+
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~ 325 (364)
T 3op5_A 268 PKYVRDSKIRYRENIASLMDKCFPA-----ANAPGEIAKYMETVKLLDYTEKPLYENLRDILL 325 (364)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHSCT-----TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhHHHHHHHhccc-----ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence 111 1111111111221111110 011345788999999999999999999999874
No 168
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=6.8e-38 Score=337.57 Aligned_cols=252 Identities=22% Similarity=0.388 Sum_probs=205.2
Q ss_pred hcCCcccccccCCCceeEEEEEcCCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELPTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVVY 779 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 779 (973)
.++|++.+.||+|+||.||+|...+++.||||++..... ..+.+.+|++++++++||||+++++++.+ +..++||
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~ 86 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT 86 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS----CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcc----cHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEE
Confidence 468999999999999999999888888999999975432 24788999999999999999999999874 4688999
Q ss_pred EecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccCC
Q 002069 780 EYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKLG 859 (973)
Q Consensus 780 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 859 (973)
||+++++|.+++.... ...+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+......
T Consensus 87 e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 162 (279)
T 1qpc_A 87 EYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDN 162 (279)
T ss_dssp ECCTTCBHHHHTTSHH-HHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSS
T ss_pred ecCCCCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCc
Confidence 9999999999996532 23689999999999999999999999 9999999999999999999999999999877543
Q ss_pred CC-cccccccccCcccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCCch
Q 002069 860 LS-NRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSICSSLSSNLNIALDEMLDPRLPTPLR 937 (973)
Q Consensus 860 ~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 937 (973)
.. ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||....... .............+.
T Consensus 163 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~--- 233 (279)
T 1qpc_A 163 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE------VIQNLERGYRMVRPD--- 233 (279)
T ss_dssp CEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH------HHHHHHTTCCCCCCT---
T ss_pred ccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHH------HHHHHhcccCCCCcc---
Confidence 22 2233457889999999988889999999999999999999 999987433210 001111111111111
Q ss_pred hhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 938 NVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 938 ~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
..+..+.+++.+|++.||++|||++++++.|+
T Consensus 234 ---~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 265 (279)
T 1qpc_A 234 ---NCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265 (279)
T ss_dssp ---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ---cccHHHHHHHHHHhccChhhCCCHHHHHHHHH
Confidence 12345788999999999999999999999875
No 169
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.4e-37 Score=362.43 Aligned_cols=320 Identities=21% Similarity=0.205 Sum_probs=193.8
Q ss_pred CEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCcccCCccccCccccceeeccCC
Q 002069 27 KLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSLSDLRLSNN 106 (973)
Q Consensus 27 ~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n 106 (973)
+.++.++++++ .+|..+. +++++|+|++|++++..|..|.++++|++|+|++|.+++..|..|+++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 14 RAVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp TEEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 56777777776 4566553 57777777777777655667777777777777777777666777777777777777777
Q ss_pred cCCCCCCCccccCCccceeecccccccccCcccccccCCCCceecccCCCCCCCCccccCccccceeeecccccCCCCCc
Q 002069 107 SLNGSIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSGAIPFSLGNLTNLVTLYIGINALSGSIPN 186 (973)
Q Consensus 107 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~ 186 (973)
++++..+..|.++++|++|+|++|++++..|..|.++++|++|++++|.+++..|..|.++++|+.|++++|++++..+.
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 170 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTE 170 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHH
T ss_pred cCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChh
Confidence 77744445567777777777777777766666677777777777777777666666666666666666666666654444
Q ss_pred cccccCccceeeccccccccccccccCCCCcccEEecCCcccCCCCCccccccccccceecccccccCCCCcccCCcchh
Q 002069 187 EIGNLKSLSDLRLDYNTLSGSILYSFGNLTKLEILYLDVNALSGLIPNEIGNLKSLLALQLNYNTLSGSIPCSFGNLTKL 266 (973)
Q Consensus 187 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 266 (973)
.+.++++|+.|++++|.+.++.+..|..+++|+.|++++|...+..|..+....+|+.|++++|+++
T Consensus 171 ~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~------------- 237 (477)
T 2id5_A 171 ALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLT------------- 237 (477)
T ss_dssp HHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCC-------------
T ss_pred HhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCccc-------------
Confidence 5666666666666666666555555555555555555555443333333222334444444444333
Q ss_pred hhccCCCcccCchhhhhhccccccceEEcccccccCCcCchhhcCCccceeeccccccCCCCCccccCCCCCCcEEcCCC
Q 002069 267 VISCLGTNALSSSILEEIGNLKSLLHLQLNYNTLSGSIPLSLGSLTNLATLYFSTNALSGSIPNEITNLRSLSDLQLSEN 346 (973)
Q Consensus 267 ~~l~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 346 (973)
.++...|..+++|+.|++++|.+++..+..|..+++|+.|++++|++++..|..|.++++|++|+|++|
T Consensus 238 -----------~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 306 (477)
T 2id5_A 238 -----------AVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGN 306 (477)
T ss_dssp -----------SCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSS
T ss_pred -----------ccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCC
Confidence 222233444555555555555555544455555555555555555555555555555555555555555
Q ss_pred CCCCcchhccCCCCCCcEEEccCCccc
Q 002069 347 TLNGSIPLALGNLTKLVSLDLSINKLS 373 (973)
Q Consensus 347 ~l~~~~~~~~~~l~~L~~L~Ls~N~i~ 373 (973)
++++..+..|..+++|++|+|++|.+.
T Consensus 307 ~l~~~~~~~~~~l~~L~~L~l~~N~l~ 333 (477)
T 2id5_A 307 QLTTLEESVFHSVGNLETLILDSNPLA 333 (477)
T ss_dssp CCSCCCGGGBSCGGGCCEEECCSSCEE
T ss_pred cCceeCHhHcCCCcccCEEEccCCCcc
Confidence 555444445555555555555555554
No 170
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=7.4e-38 Score=366.04 Aligned_cols=255 Identities=24% Similarity=0.321 Sum_probs=204.7
Q ss_pred HhcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcc----------hhhHHHHHHHHHHhhcCCCCceeeece
Q 002069 699 ATKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGE----------MACQQEFLNEGNALTKIRHRNIVKFYG 767 (973)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~----------~~~~~~~~~e~~~l~~l~h~niv~~~~ 767 (973)
..++|++.+.||+|+||+||+|.. .+++.||||++....... ....+.+.+|+.++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 357899999999999999999965 478999999987543221 123578999999999999999999999
Q ss_pred eeeccceeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCC---c
Q 002069 768 FCSHALHSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEY---E 844 (973)
Q Consensus 768 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~---~ 844 (973)
++.++...++||||+++|+|.+++... ..+++..++.++.|++.|++|||+. +|+||||||+||+++.++ .
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~ 187 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINR---HKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLN 187 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSS
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCcc
Confidence 999999999999999999999988643 3589999999999999999999999 999999999999998776 6
Q ss_pred eEEecccccccccCCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhh
Q 002069 845 AHVSDFGISKFLKLGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIAL 924 (973)
Q Consensus 845 ~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~ 924 (973)
+||+|||+++..... .......||+.|+|||++.+ .++.++||||+||++|+|++|+.||..... ....
T Consensus 188 ~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~---------~~~~ 256 (504)
T 3q5i_A 188 IKIVDFGLSSFFSKD-YKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQND---------QDII 256 (504)
T ss_dssp EEECCCTTCEECCTT-SCBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSH---------HHHH
T ss_pred EEEEECCCCEEcCCC-CccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCCH---------HHHH
Confidence 999999999877654 33445679999999999874 689999999999999999999999975332 1112
Q ss_pred hhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 925 DEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
..+...........+...+..+.+++.+||+.||.+|||++|+++.
T Consensus 257 ~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 257 KKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp HHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 2222222222222222334568899999999999999999999864
No 171
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=2.5e-38 Score=348.87 Aligned_cols=265 Identities=20% Similarity=0.278 Sum_probs=206.5
Q ss_pred ccHHHHHHHhcCCccc-ccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcC-CCCceeeece
Q 002069 691 IVHEEIIRATKNFDDE-HCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKI-RHRNIVKFYG 767 (973)
Q Consensus 691 ~~~~~~~~~~~~~~~~-~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~ 767 (973)
+.+.......++|.+. +.||+|+||.||+|... +++.||||++....... .....+.+|+.+++.+ +||||+++++
T Consensus 18 ~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~~iv~~~~ 96 (327)
T 3lm5_A 18 LYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQ-DCRAEILHEIAVLELAKSCPRVINLHE 96 (327)
T ss_dssp CCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTE-ECHHHHHHHHHHHHHTTTCTTBCCEEE
T ss_pred hHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcch-HHHHHHHHHHHHHHhccCCCCEEEEEE
Confidence 3344455566778887 88999999999999654 79999999987543322 2357889999999999 5699999999
Q ss_pred eeeccceeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecC---CCc
Q 002069 768 FCSHALHSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNL---EYE 844 (973)
Q Consensus 768 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~---~~~ 844 (973)
++.+.+..++||||+++++|.+++.... ...+++.+++.++.|++.|++|||+. +|+||||||+||+++. ++.
T Consensus 97 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~ 172 (327)
T 3lm5_A 97 VYENTSEIILILEYAAGGEIFSLCLPEL-AEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGD 172 (327)
T ss_dssp EEECSSEEEEEEECCTTEEGGGGGSSCC--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCC
T ss_pred EEEeCCeEEEEEEecCCCcHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCc
Confidence 9999999999999999999999986433 34689999999999999999999999 9999999999999988 789
Q ss_pred eEEecccccccccCCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhh
Q 002069 845 AHVSDFGISKFLKLGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIAL 924 (973)
Q Consensus 845 ~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~ 924 (973)
+||+|||.++..... .......||+.|+|||++.+..++.++||||+|+++|||++|+.||......... ...
T Consensus 173 ~kL~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~------~~i 245 (327)
T 3lm5_A 173 IKIVDFGMSRKIGHA-CELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETY------LNI 245 (327)
T ss_dssp EEECCGGGCEEC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH------HHH
T ss_pred EEEeeCccccccCCc-cccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHH------HHH
Confidence 999999999877543 2234467999999999999999999999999999999999999999754321110 001
Q ss_pred hhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 925 DEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
.... ...+. .........+.+++.+||+.||.+|||++++++.
T Consensus 246 ~~~~-~~~~~--~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 246 SQVN-VDYSE--ETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp HHTC-CCCCT--TTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred Hhcc-cccCc--hhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 1111 11111 1111223457789999999999999999999864
No 172
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=2.6e-38 Score=348.60 Aligned_cols=252 Identities=23% Similarity=0.337 Sum_probs=198.1
Q ss_pred cCCcccccccCCCceeEEEEEcC-CCCE----EEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeecccee
Q 002069 701 KNFDDEHCIGNGGQGSVYKAELP-TGEI----VAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHS 775 (973)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 775 (973)
++|++.+.||+|+||+||+|.+. +++. ||+|.+....... ....+.+|+.++++++||||+++++++.+ ...
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~--~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~ 89 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQ--SFQAVTDHMLAIGSLDHAHIVRLLGLCPG-SSL 89 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCS--CBCSCCHHHHHHHTCCCTTBCCEEEEECB-SSE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHH--HHHHHHHHHHHHhcCCCCCcCeEEEEEcC-Ccc
Confidence 57999999999999999999653 4543 8888876443221 23567789999999999999999999864 568
Q ss_pred EEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEeccccccc
Q 002069 776 FVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKF 855 (973)
Q Consensus 776 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~ 855 (973)
++||||+++|+|.+++.... ..+++..++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 90 ~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~ 164 (325)
T 3kex_A 90 QLVTQYLPLGSLLDHVRQHR--GALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADL 164 (325)
T ss_dssp EEEEECCTTCBSHHHHHSSG--GGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGG
T ss_pred EEEEEeCCCCCHHHHHHHcc--ccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCcccc
Confidence 89999999999999997653 4688899999999999999999999 999999999999999999999999999987
Q ss_pred ccCCCC--cccccccccCcccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcchhhhhhhhhhhhhhhhhhhcCCCC
Q 002069 856 LKLGLS--NRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSICSSLSSNLNIALDEMLDPRL 932 (973)
Q Consensus 856 ~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 932 (973)
...... ......+++.|+|||++.+..++.++|||||||++|||+| |+.||...... ..............
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~------~~~~~~~~~~~~~~ 238 (325)
T 3kex_A 165 LPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA------EVPDLLEKGERLAQ 238 (325)
T ss_dssp SCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT------HHHHHHHTTCBCCC
T ss_pred cCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH------HHHHHHHcCCCCCC
Confidence 754432 2344567889999999998999999999999999999999 99999743311 00111111111111
Q ss_pred CCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 933 PTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 933 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
+.. ....+.+++.+||+.||.+|||++++++.|+
T Consensus 239 ~~~------~~~~~~~li~~~l~~dp~~Rps~~el~~~l~ 272 (325)
T 3kex_A 239 PQI------CTIDVYMVMVKCWMIDENIRPTFKELANEFT 272 (325)
T ss_dssp CTT------BCTTTTHHHHHHTCSCTTTSCCHHHHHHHHH
T ss_pred CCc------CcHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 111 1224678899999999999999999999874
No 173
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=5.3e-38 Score=343.60 Aligned_cols=266 Identities=23% Similarity=0.301 Sum_probs=198.8
Q ss_pred HhcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCc--chhhHHHHHHHHHHhhcC---CCCceeeeceeeecc
Q 002069 699 ATKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPG--EMACQQEFLNEGNALTKI---RHRNIVKFYGFCSHA 772 (973)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~~ 772 (973)
..++|++.+.||+|+||+||+|.. .+++.||||++...... .......+.+|+.+++++ +||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 357899999999999999999975 57899999998633211 111124566777776666 599999999999765
Q ss_pred c-----eeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEE
Q 002069 773 L-----HSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHV 847 (973)
Q Consensus 773 ~-----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl 847 (973)
. ..++||||++ ++|.+++..... ..+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.+||
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~-~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl 161 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPP-PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKL 161 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCT-TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEE
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEE
Confidence 4 5799999997 699999976542 3489999999999999999999999 9999999999999999999999
Q ss_pred ecccccccccCCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhh--hhhh----hh
Q 002069 848 SDFGISKFLKLGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSS--LSSN----LN 921 (973)
Q Consensus 848 ~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~--~~~~----~~ 921 (973)
+|||.++..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||......... .... ..
T Consensus 162 ~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~ 240 (308)
T 3g33_A 162 ADFGLARIYSYQ-MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 240 (308)
T ss_dssp CSCSCTTTSTTC-CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred eeCccccccCCC-cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence 999999876543 2334567899999999999999999999999999999999999999754321110 0000 00
Q ss_pred hhh-------hhhcCCCCCCC-chhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 922 IAL-------DEMLDPRLPTP-LRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 922 ~~~-------~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
... .....+..+.. ..........+.+++.+||+.||++|||++|+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 241 DDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp TTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 000 00000000000 00011223567899999999999999999999874
No 174
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=1.3e-37 Score=339.72 Aligned_cols=250 Identities=25% Similarity=0.380 Sum_probs=208.3
Q ss_pred hcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVV 778 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 778 (973)
.+.|++.+.||+|+||.||+|.. .+++.||||++...... ...+.+.+|+.++++++||||+++++++.+....++|
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 98 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE--DEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWII 98 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCS--TTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccH--HHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEE
Confidence 46799999999999999999954 57999999999765333 2357899999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccC
Q 002069 779 YEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKL 858 (973)
Q Consensus 779 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 858 (973)
|||+++++|.+++.. ..+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+.....
T Consensus 99 ~e~~~~~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~ 171 (303)
T 3a7i_A 99 MEYLGGGSALDLLEP----GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD 171 (303)
T ss_dssp EECCTTEEHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBT
T ss_pred EEeCCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCc
Confidence 999999999999864 3588999999999999999999999 999999999999999999999999999987765
Q ss_pred CCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCCchh
Q 002069 859 GLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLPTPLRN 938 (973)
Q Consensus 859 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 938 (973)
.........|++.|+|||++.+..++.++||||||+++|+|++|+.||........ .........+.....
T Consensus 172 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~------~~~~~~~~~~~~~~~--- 242 (303)
T 3a7i_A 172 TQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKV------LFLIPKNNPPTLEGN--- 242 (303)
T ss_dssp TBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH------HHHHHHSCCCCCCSS---
T ss_pred cccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHH------HHHhhcCCCCCCccc---
Confidence 54445567799999999999999999999999999999999999999974332110 001111111222211
Q ss_pred hHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 939 VQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 939 ~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
.+..+.+++.+||+.||.+|||++++++.
T Consensus 243 ---~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 243 ---YSKPLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp ---CCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred ---cCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 22347889999999999999999999874
No 175
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.1e-38 Score=352.18 Aligned_cols=253 Identities=25% Similarity=0.379 Sum_probs=191.2
Q ss_pred cCCcccccccCCCceeEEEEEcC--CC--CEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeec-ccee
Q 002069 701 KNFDDEHCIGNGGQGSVYKAELP--TG--EIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSH-ALHS 775 (973)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~--~~--~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-~~~~ 775 (973)
..|++.+.||+|+||+||+|.+. ++ ..||||.+.... .....+.|.+|+.++++++||||+++++++.+ ++..
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ 166 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT--DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP 166 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCS--CSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCC
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCe
Confidence 35778899999999999999653 22 368999987543 23346889999999999999999999998754 5578
Q ss_pred EEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEeccccccc
Q 002069 776 FVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKF 855 (973)
Q Consensus 776 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~ 855 (973)
++||||+++|+|.++++... ..+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 167 ~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~ 241 (373)
T 3c1x_A 167 LVVLPYMKHGDLRNFIRNET--HNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARD 241 (373)
T ss_dssp EEEEECCTTCBHHHHHHCTT--CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred EEEEECCCCCCHHHHHhhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeecccccc
Confidence 99999999999999997543 3578999999999999999999999 999999999999999999999999999986
Q ss_pred ccCCCC----cccccccccCcccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcchhhhhhhhhhhhhhhhhhhcCC
Q 002069 856 LKLGLS----NRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSICSSLSSNLNIALDEMLDP 930 (973)
Q Consensus 856 ~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 930 (973)
...... ......+++.|+|||.+.+..++.++|||||||++|||+| |.+||....... ...........
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~------~~~~~~~~~~~ 315 (373)
T 3c1x_A 242 MYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD------ITVYLLQGRRL 315 (373)
T ss_dssp ----------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC------HHHHHHTTCCC
T ss_pred ccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH------HHHHHHcCCCC
Confidence 643321 1233557889999999999999999999999999999999 677776432110 00011111111
Q ss_pred CCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 931 RLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 931 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
..+. ..+..+.+++.+||+.||++|||++++++.|+
T Consensus 316 ~~p~------~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~ 351 (373)
T 3c1x_A 316 LQPE------YCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 351 (373)
T ss_dssp CCCT------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCC------CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 1111 12345788999999999999999999999875
No 176
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.1e-37 Score=342.46 Aligned_cols=259 Identities=25% Similarity=0.383 Sum_probs=203.2
Q ss_pred CcccccccCCCceeEEEEEc-----CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeec--ccee
Q 002069 703 FDDEHCIGNGGQGSVYKAEL-----PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSH--ALHS 775 (973)
Q Consensus 703 ~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~ 775 (973)
|++.+.||+|+||+||++.+ .+++.||||++.... .....+.+.+|+.++++++||||+++++++.+ ....
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 110 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA--GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASL 110 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEecccc--ChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceE
Confidence 49999999999999998854 267899999998653 23346789999999999999999999999987 4578
Q ss_pred EEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEeccccccc
Q 002069 776 FVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKF 855 (973)
Q Consensus 776 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~ 855 (973)
++||||+++++|.+++... .+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.++.
T Consensus 111 ~lv~e~~~~~~L~~~l~~~----~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~ 183 (318)
T 3lxp_A 111 QLVMEYVPLGSLRDYLPRH----SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKA 183 (318)
T ss_dssp EEEECCCTTCBHHHHGGGS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred EEEEecccCCcHHHHHhhC----CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCcccccc
Confidence 9999999999999999754 388999999999999999999999 999999999999999999999999999987
Q ss_pred ccCCCC---cccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhh-----hhhhhhhhhhh
Q 002069 856 LKLGLS---NRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSL-----SSNLNIALDEM 927 (973)
Q Consensus 856 ~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~-----~~~~~~~~~~~ 927 (973)
...... ......+++.|+|||++.+..++.++||||+|+++|||+||+.||.......... .........+.
T Consensus 184 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (318)
T 3lxp_A 184 VPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTEL 263 (318)
T ss_dssp CCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHH
T ss_pred ccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHH
Confidence 765432 2234567888999999998889999999999999999999999987543211000 00000011111
Q ss_pred cCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 928 LDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
+........ ....+..+.+++.+||+.||.+|||++++++.|+
T Consensus 264 ~~~~~~~~~--~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 306 (318)
T 3lxp_A 264 LERGERLPR--PDKCPAEVYHLMKNCWETEASFRPTFENLIPILK 306 (318)
T ss_dssp HHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HhcccCCCC--CccccHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 111111000 0122345789999999999999999999999875
No 177
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.7e-38 Score=349.72 Aligned_cols=262 Identities=17% Similarity=0.226 Sum_probs=194.0
Q ss_pred cCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEEE
Q 002069 701 KNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVVY 779 (973)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 779 (973)
++|++.+.||+|+||+||+|... +++.||||++....... ....+.+|+.++++++||||+++++++..++..++||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEG--APCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF 79 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC--------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccc--cchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEe
Confidence 57999999999999999999664 88999999987543221 1234557999999999999999999999999999999
Q ss_pred EecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccCC
Q 002069 780 EYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKLG 859 (973)
Q Consensus 780 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 859 (973)
||++ ++|.+++.... ..+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.++.....
T Consensus 80 e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 153 (324)
T 3mtl_A 80 EYLD-KDLKQYLDDCG--NIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIP 153 (324)
T ss_dssp ECCS-EEHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC---
T ss_pred cccc-cCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCC
Confidence 9998 58988886543 3588999999999999999999999 9999999999999999999999999999876654
Q ss_pred CCcccccccccCccccccccc-CCCCCccchHHHHHHHHHHHhCCCCCcchhhhhh--hhhhh----hh---------hh
Q 002069 860 LSNRTELAGTFGYIAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSICS--SLSSN----LN---------IA 923 (973)
Q Consensus 860 ~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~--~~~~~----~~---------~~ 923 (973)
........||+.|+|||++.+ ..++.++||||+||++|||++|+.||........ ..... .. ..
T Consensus 154 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 233 (324)
T 3mtl_A 154 TKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEE 233 (324)
T ss_dssp ---------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHH
T ss_pred ccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchh
Confidence 444555678999999999876 5689999999999999999999999975432110 00000 00 00
Q ss_pred hhhhcCCCCCCC--chhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 924 LDEMLDPRLPTP--LRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 924 ~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
......+..... ..........+.+++.+||+.||.+|||++|+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 282 (324)
T 3mtl_A 234 FKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH 282 (324)
T ss_dssp HHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 000000110000 00111223457899999999999999999999863
No 178
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=6.4e-38 Score=353.40 Aligned_cols=251 Identities=22% Similarity=0.332 Sum_probs=198.3
Q ss_pred cCCcccccccCCCceeEEEEEcCCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCC--CCceeeeceeeeccceeEEE
Q 002069 701 KNFDDEHCIGNGGQGSVYKAELPTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIR--HRNIVKFYGFCSHALHSFVV 778 (973)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~~~~~lv 778 (973)
..|++.+.||+|+||.||+|...+++.||||++..... .....+.+.+|+.++++++ ||||+++++++..++..++|
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 134 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 134 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccc-cHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEE
Confidence 56999999999999999999888899999999875433 2334678999999999996 59999999999999999999
Q ss_pred EEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccC
Q 002069 779 YEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKL 858 (973)
Q Consensus 779 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 858 (973)
|| +.+++|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+||+++ ++.+||+|||+++.+..
T Consensus 135 ~E-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~ 206 (390)
T 2zmd_A 135 ME-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQP 206 (390)
T ss_dssp EE-CCSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC--
T ss_pred Ee-cCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccC
Confidence 99 56889999997543 678899999999999999999999 999999999999995 68999999999987754
Q ss_pred CCC--cccccccccCccccccccc-----------CCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhh
Q 002069 859 GLS--NRTELAGTFGYIAPELAYT-----------MKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALD 925 (973)
Q Consensus 859 ~~~--~~~~~~g~~~y~aPE~~~~-----------~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 925 (973)
... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ....
T Consensus 207 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~--------~~~~ 278 (390)
T 2zmd_A 207 DTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI--------SKLH 278 (390)
T ss_dssp -------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH--------HHHH
T ss_pred CCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHH--------HHHH
Confidence 322 2345679999999999865 368889999999999999999999997432111 1112
Q ss_pred hhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 926 EMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
..+++......... ....+.+++.+||+.||.+|||++|+++.
T Consensus 279 ~~~~~~~~~~~~~~--~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 279 AIIDPNHEIEFPDI--PEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp HHHCTTSCCCCCCC--SCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHhCccccCCCCcc--chHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 22222211111111 12357789999999999999999999864
No 179
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=7.9e-39 Score=371.39 Aligned_cols=257 Identities=21% Similarity=0.283 Sum_probs=206.7
Q ss_pred hcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVV 778 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 778 (973)
.++|++.+.||+|+||.||+|.. .+|+.||||++.............+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 46799999999999999999965 48999999998643222222346788999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccC
Q 002069 779 YEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKL 858 (973)
Q Consensus 779 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 858 (973)
|||+++|+|.+++.... ...+++..++.++.||+.|++|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 263 mEy~~gg~L~~~l~~~~-~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~ 338 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMG-QAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPE 338 (576)
T ss_dssp ECCCCSCBHHHHHHSSS-SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEcCCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceeccc
Confidence 99999999999997544 23589999999999999999999999 999999999999999999999999999987754
Q ss_pred CCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCCchh
Q 002069 859 GLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLPTPLRN 938 (973)
Q Consensus 859 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 938 (973)
.. ......||+.|+|||++.+..++.++||||+||++|||++|+.||........ .......... ....++..
T Consensus 339 ~~-~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~--~~~i~~~i~~-~~~~~p~~--- 411 (576)
T 2acx_A 339 GQ-TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK--REEVERLVKE-VPEEYSER--- 411 (576)
T ss_dssp TC-CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCC--HHHHHHHHHH-CCCCCCTT---
T ss_pred Cc-cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchh--HHHHHHHhhc-ccccCCcc---
Confidence 42 33446899999999999998999999999999999999999999975321100 0000011111 11122211
Q ss_pred hHHHHHHHHHHHhcccCCCCCCCC-----CHHHHHHH
Q 002069 939 VQDKLISIMEVSISCLDESPTSRP-----TMQKVSQL 970 (973)
Q Consensus 939 ~~~~~~~l~~li~~cl~~dP~~RP-----s~~ev~~~ 970 (973)
.+..+.+++.+||+.||.+|| +++|++++
T Consensus 412 ---~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 412 ---FSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp ---SCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred ---CCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 223577899999999999999 78888753
No 180
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=353.41 Aligned_cols=261 Identities=20% Similarity=0.221 Sum_probs=196.8
Q ss_pred hcCCcccccccCCCceeEEEEEcC----CCCEEEEEEcCCCCCcchh--------hHHHHHHHHHHhhcCCCCceeeece
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELP----TGEIVAVKKFHSPLPGEMA--------CQQEFLNEGNALTKIRHRNIVKFYG 767 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~--------~~~~~~~e~~~l~~l~h~niv~~~~ 767 (973)
.++|++.+.||+|+||+||+|... +++.||||++......... ....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 367999999999999999999764 6788999998765322111 1234677888999999999999999
Q ss_pred eeec----cceeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCC
Q 002069 768 FCSH----ALHSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEY 843 (973)
Q Consensus 768 ~~~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~ 843 (973)
++.. ....++||||+ +++|.+++.... .+++.+++.++.||+.|++|||+. +|+||||||+||+++.++
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~ 188 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG---TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKN 188 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG---BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSS
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCC
Confidence 9977 67889999999 999999997544 689999999999999999999999 999999999999999887
Q ss_pred --ceEEecccccccccCCCC-------cccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhh
Q 002069 844 --EAHVSDFGISKFLKLGLS-------NRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICS 914 (973)
Q Consensus 844 --~~kl~Dfg~a~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~ 914 (973)
.+||+|||+++.+..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 189 ~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~ 268 (345)
T 2v62_A 189 PDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPV 268 (345)
T ss_dssp TTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHH
T ss_pred CCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccH
Confidence 999999999987643211 12446799999999999999999999999999999999999999964221111
Q ss_pred hhhhhhhhhhhhhcCCCCCCCchh---hHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 915 SLSSNLNIALDEMLDPRLPTPLRN---VQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
.... ......+.++..... ....+..+.+++.+||+.||++||++++|++.|+
T Consensus 269 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~ 324 (345)
T 2v62_A 269 AVQT-----AKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILN 324 (345)
T ss_dssp HHHH-----HHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHC
T ss_pred HHHH-----HHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHh
Confidence 0000 000000011100000 0022346889999999999999999999999885
No 181
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-37 Score=345.25 Aligned_cols=265 Identities=25% Similarity=0.358 Sum_probs=199.7
Q ss_pred HHHHhcCCcccccccCCCceeEEEEEcCCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcC--CCCceeeeceeeecc-
Q 002069 696 IIRATKNFDDEHCIGNGGQGSVYKAELPTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKI--RHRNIVKFYGFCSHA- 772 (973)
Q Consensus 696 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l--~h~niv~~~~~~~~~- 772 (973)
.....++|++.+.||+|+||.||+|+. .++.||||++... ....+..|.+++... +||||+++++++...
T Consensus 32 ~~~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~ 104 (337)
T 3mdy_A 32 QRTIAKQIQMVKQIGKGRYGEVWMGKW-RGEKVAVKVFFTT------EEASWFRETEIYQTVLMRHENILGFIAADIKGT 104 (337)
T ss_dssp HTTHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEEEGG------GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESC
T ss_pred ccccccceEEEeEeecCCCeEEEEEEE-CCceEEEEEEecc------ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCC
Confidence 334567899999999999999999987 4899999998532 134455555555554 999999999999776
Q ss_pred ---ceeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCC-----CCCeEeecCCCCCeeecCCCc
Q 002069 773 ---LHSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNC-----FPPIVHRDISSKNVLLNLEYE 844 (973)
Q Consensus 773 ---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~-----~~~i~H~Dlk~~Nill~~~~~ 844 (973)
...++||||+++|+|.++++.. .+++.+++.++.|++.|++|||+.. .++|+||||||+||+++.++.
T Consensus 105 ~~~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~ 180 (337)
T 3mdy_A 105 GSWTQLYLITDYHENGSLYDYLKST----TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGT 180 (337)
T ss_dssp GGGCEEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSC
T ss_pred CCCCceEEEEeccCCCcHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCC
Confidence 6789999999999999999643 5889999999999999999999862 238999999999999999999
Q ss_pred eEEecccccccccCCCCc----ccccccccCcccccccccCCCCCc------cchHHHHHHHHHHHhC----------CC
Q 002069 845 AHVSDFGISKFLKLGLSN----RTELAGTFGYIAPELAYTMKVTEK------CDVYSFGVLALEVIKG----------KH 904 (973)
Q Consensus 845 ~kl~Dfg~a~~~~~~~~~----~~~~~g~~~y~aPE~~~~~~~~~~------~Dv~slG~~l~el~tg----------~~ 904 (973)
+||+|||.++.+...... .....||+.|+|||++.+.....+ +|||||||++|||+|| +.
T Consensus 181 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~ 260 (337)
T 3mdy_A 181 CCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQL 260 (337)
T ss_dssp EEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred EEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccc
Confidence 999999999766543222 224579999999999987766665 9999999999999999 55
Q ss_pred CCcchhhhhhhhhhhhhhhhhhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 905 PRDFISSICSSLSSNLNIALDEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 905 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
||.......................+..+.... .......+.+++.+||+.||.+|||+++|++.|+
T Consensus 261 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 327 (337)
T 3mdy_A 261 PYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWS-SDECLRQMGKLMTECWAHNPASRLTALRVKKTLA 327 (337)
T ss_dssp TTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGG-GSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred cHhhhcCCCCchhhhHHHHhhhccCccccccch-hhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHH
Confidence 554221110000000011111122222222211 2356677899999999999999999999999885
No 182
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-37 Score=337.20 Aligned_cols=252 Identities=25% Similarity=0.330 Sum_probs=203.4
Q ss_pred cCCcccc-cccCCCceeEEEEEcC---CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeE
Q 002069 701 KNFDDEH-CIGNGGQGSVYKAELP---TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSF 776 (973)
Q Consensus 701 ~~~~~~~-~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 776 (973)
++|.+.+ .||+|+||.||+|... +++.||||+++... .....+.+.+|+.++++++||||+++++++ ..+..+
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~ 85 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALM 85 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCcc--chhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcE
Confidence 5666666 9999999999999643 67789999998643 234467899999999999999999999999 455689
Q ss_pred EEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccc
Q 002069 777 VVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFL 856 (973)
Q Consensus 777 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~ 856 (973)
+||||+++++|.+++.... ..+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||.++..
T Consensus 86 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~ 160 (287)
T 1u59_A 86 LVMEMAGGGPLHKFLVGKR--EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKAL 160 (287)
T ss_dssp EEEECCTTEEHHHHHTTCT--TTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEEeCCCCCHHHHHHhCC--ccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeee
Confidence 9999999999999996443 4589999999999999999999999 9999999999999999999999999999877
Q ss_pred cCCCCc---ccccccccCcccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcchhhhhhhhhhhhhhhhhhhcCCCC
Q 002069 857 KLGLSN---RTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSICSSLSSNLNIALDEMLDPRL 932 (973)
Q Consensus 857 ~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 932 (973)
...... .....+|+.|+|||++.+..++.++||||||+++|||++ |+.||....... ..........+..
T Consensus 161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~------~~~~i~~~~~~~~ 234 (287)
T 1u59_A 161 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE------VMAFIEQGKRMEC 234 (287)
T ss_dssp TTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH------HHHHHHTTCCCCC
T ss_pred ccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH------HHHHHhcCCcCCC
Confidence 543221 223456889999999988889999999999999999998 999997433210 0111111111122
Q ss_pred CCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 933 PTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 933 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
+. ..+..+.+++.+||+.||.+||++.++++.|+
T Consensus 235 ~~------~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 268 (287)
T 1u59_A 235 PP------ECPPELYALMSDCWIYKWEDRPDFLTVEQRMR 268 (287)
T ss_dssp CT------TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred CC------CcCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 21 12345788999999999999999999999875
No 183
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=4.2e-38 Score=347.39 Aligned_cols=265 Identities=18% Similarity=0.265 Sum_probs=193.9
Q ss_pred HHhcCCcccccccCCCceeEEEEE-cCCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeE
Q 002069 698 RATKNFDDEHCIGNGGQGSVYKAE-LPTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSF 776 (973)
Q Consensus 698 ~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 776 (973)
...++|++.+.||+|+||+||+|. ..+++.||||++...... ....+.+.+|+.++++++||||+++++++.+++..+
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEE-EGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLH 109 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC---------CHHHHHHGGGCCCTTBCCEEEEEEETTEEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccc-cccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEE
Confidence 345789999999999999999995 458899999999755332 223567889999999999999999999999999999
Q ss_pred EEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeec-----CCCceEEeccc
Q 002069 777 VVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLN-----LEYEAHVSDFG 851 (973)
Q Consensus 777 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~-----~~~~~kl~Dfg 851 (973)
+||||++ ++|.+++.... .+++.+++.++.|++.|++|||+. +|+||||||+||+++ .++.+||+|||
T Consensus 110 lv~e~~~-~~L~~~~~~~~---~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg 182 (329)
T 3gbz_A 110 LIFEYAE-NDLKKYMDKNP---DVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFG 182 (329)
T ss_dssp EEEECCS-EEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTT
T ss_pred EEEecCC-CCHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCC
Confidence 9999998 59999987543 588999999999999999999999 999999999999994 44569999999
Q ss_pred ccccccCCCCcccccccccCcccccccccC-CCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhh--h----hhhh-
Q 002069 852 ISKFLKLGLSNRTELAGTFGYIAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSS--N----LNIA- 923 (973)
Q Consensus 852 ~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~--~----~~~~- 923 (973)
.++.............||+.|+|||++.+. .++.++||||+||++|||++|+.||............ . ....
T Consensus 183 ~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 262 (329)
T 3gbz_A 183 LARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTW 262 (329)
T ss_dssp HHHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTS
T ss_pred CccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhh
Confidence 998776554455566789999999998874 4899999999999999999999999754322110000 0 0000
Q ss_pred -----hhhhcC--CCCCC-Cchh--hHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 924 -----LDEMLD--PRLPT-PLRN--VQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 924 -----~~~~~~--~~~~~-~~~~--~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
...... +.... .... .......+.+++.+||+.||.+|||++|+++.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 319 (329)
T 3gbz_A 263 PGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH 319 (329)
T ss_dssp TTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence 000000 00000 0000 00123567899999999999999999999873
No 184
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.9e-38 Score=344.89 Aligned_cols=252 Identities=29% Similarity=0.474 Sum_probs=197.8
Q ss_pred cCCcccccccCCCceeEEEEEcCC-----CCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeecccee
Q 002069 701 KNFDDEHCIGNGGQGSVYKAELPT-----GEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHS 775 (973)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 775 (973)
.+|++.+.||+|+||+||+|.... +..||||++.... .......+.+|+.++++++||||+++++++.+.+..
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 121 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY--TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPM 121 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCc
Confidence 568888999999999999996532 2369999997543 233457899999999999999999999999999999
Q ss_pred EEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEeccccccc
Q 002069 776 FVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKF 855 (973)
Q Consensus 776 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~ 855 (973)
++||||+++++|.+++.... ..+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.++.
T Consensus 122 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 196 (333)
T 1mqb_A 122 MIITEYMENGALDKFLREKD--GEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRV 196 (333)
T ss_dssp EEEEECCTTEEHHHHHHHTT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred EEEEeCCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchh
Confidence 99999999999999997542 4689999999999999999999999 999999999999999999999999999987
Q ss_pred ccCCCC---cccccccccCcccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcchhhhhhhhhhhhhhhhhhhcCC-
Q 002069 856 LKLGLS---NRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSICSSLSSNLNIALDEMLDP- 930 (973)
Q Consensus 856 ~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~- 930 (973)
...... ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... .........
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~---------~~~~~~~~~~ 267 (333)
T 1mqb_A 197 LEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH---------EVMKAINDGF 267 (333)
T ss_dssp --------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH---------HHHHHHHTTC
T ss_pred hccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH---------HHHHHHHCCC
Confidence 654322 1223346788999999998899999999999999999999 99999643321 111111111
Q ss_pred CCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 931 RLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 931 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
..+.. ...+..+.+++.+||+.||.+||++.++++.|+
T Consensus 268 ~~~~~----~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~ 305 (333)
T 1mqb_A 268 RLPTP----MDCPSAIYQLMMQCWQQERARRPKFADIVSILD 305 (333)
T ss_dssp CCCCC----TTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred cCCCc----ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11111 112345788999999999999999999999874
No 185
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=6.4e-38 Score=344.41 Aligned_cols=262 Identities=19% Similarity=0.290 Sum_probs=198.6
Q ss_pred hcCCccc-ccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcC-CCCceeeeceeeeccceeE
Q 002069 700 TKNFDDE-HCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKI-RHRNIVKFYGFCSHALHSF 776 (973)
Q Consensus 700 ~~~~~~~-~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 776 (973)
.+.|++. +.||+|+||+||+|.. .+++.||||++..... .....+.+|+.++.++ +||||+++++++.+++..+
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~ 87 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPG---HIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFY 87 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSS---CCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcc---hhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEE
Confidence 3578885 7899999999999965 4799999999975432 2257889999999885 7999999999999999999
Q ss_pred EEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCc---eEEeccccc
Q 002069 777 VVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYE---AHVSDFGIS 853 (973)
Q Consensus 777 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~---~kl~Dfg~a 853 (973)
+||||+++++|.+++... ..+++.+++.++.|++.|++|||+. +|+||||||+||+++.++. +||+|||++
T Consensus 88 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~ 161 (316)
T 2ac3_A 88 LVFEKMRGGSILSHIHKR---RHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLG 161 (316)
T ss_dssp EEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCC
T ss_pred EEEEcCCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCc
Confidence 999999999999999653 3588999999999999999999999 9999999999999988766 999999998
Q ss_pred ccccCCCC-------cccccccccCccccccccc-----CCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhh-----
Q 002069 854 KFLKLGLS-------NRTELAGTFGYIAPELAYT-----MKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSL----- 916 (973)
Q Consensus 854 ~~~~~~~~-------~~~~~~g~~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~----- 916 (973)
........ ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.........+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 241 (316)
T 2ac3_A 162 SGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEA 241 (316)
T ss_dssp C-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----C
T ss_pred cccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccccccccccccc
Confidence 76643211 1223469999999999875 558899999999999999999999997532110000
Q ss_pred -hhhhhhhhhhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 917 -SSNLNIALDEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 917 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
..................+.......+..+.+++.+||+.||.+|||++|+++.
T Consensus 242 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 242 CPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp CHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred chhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 000011111222222222211112234568899999999999999999999874
No 186
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=4.7e-38 Score=366.15 Aligned_cols=254 Identities=25% Similarity=0.323 Sum_probs=204.5
Q ss_pred HhcCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEE
Q 002069 699 ATKNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFV 777 (973)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 777 (973)
..++|++.+.||+|+||+||+|... +++.||||++...... ......+.+|+.++++++||||+++++++.+....++
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 98 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK-NKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI 98 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHB-CSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEeccccc-chHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEE
Confidence 3567999999999999999999654 8999999998532211 1225778999999999999999999999999999999
Q ss_pred EEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeec---CCCceEEecccccc
Q 002069 778 VYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLN---LEYEAHVSDFGISK 854 (973)
Q Consensus 778 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~---~~~~~kl~Dfg~a~ 854 (973)
||||+++++|.+++... ..+++.++..++.|++.|++|||+. +|+||||||+||+++ .++.+||+|||+++
T Consensus 99 v~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 172 (486)
T 3mwu_A 99 VGELYTGGELFDEIIKR---KRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLST 172 (486)
T ss_dssp EECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTT
T ss_pred EEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCe
Confidence 99999999999988643 3689999999999999999999999 999999999999995 45689999999998
Q ss_pred cccCCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCC
Q 002069 855 FLKLGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLPT 934 (973)
Q Consensus 855 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 934 (973)
..... .......||+.|+|||++.+ .++.++||||+||++|+|++|+.||...... .....+.......
T Consensus 173 ~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---------~~~~~i~~~~~~~ 241 (486)
T 3mwu_A 173 CFQQN-TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY---------DILKRVETGKYAF 241 (486)
T ss_dssp TBCCC-----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH---------HHHHHHHHTCCCS
T ss_pred ECCCC-CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---------HHHHHHHhCCCCC
Confidence 76544 23345679999999999876 5899999999999999999999999744321 1111222222222
Q ss_pred CchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 935 PLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 935 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
....+...+..+.+++.+||+.||.+|||+.++++.
T Consensus 242 ~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 242 DLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp CSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred CCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 222223344567899999999999999999999874
No 187
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=5.2e-38 Score=347.24 Aligned_cols=264 Identities=22% Similarity=0.322 Sum_probs=201.4
Q ss_pred hcCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVV 778 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 778 (973)
.++|++.+.||+|+||.||+|... +|+.||||++..... .....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 102 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDD-DKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLV 102 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSS-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCC-chHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEE
Confidence 468999999999999999999654 689999999875533 333467788999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccC
Q 002069 779 YEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKL 858 (973)
Q Consensus 779 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 858 (973)
|||++++++.++..... .+++..++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.++....
T Consensus 103 ~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 176 (331)
T 4aaa_A 103 FEFVDHTILDDLELFPN---GLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAA 176 (331)
T ss_dssp EECCSEEHHHHHHHSTT---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred EecCCcchHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecC
Confidence 99999999998865433 588999999999999999999999 999999999999999999999999999987765
Q ss_pred CCCcccccccccCcccccccccC-CCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhh------h---hhh------h
Q 002069 859 GLSNRTELAGTFGYIAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLS------S---NLN------I 922 (973)
Q Consensus 859 ~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~------~---~~~------~ 922 (973)
.........|++.|+|||++.+. .++.++||||+||++|+|++|+.||........... . ... .
T Consensus 177 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (331)
T 4aaa_A 177 PGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNP 256 (331)
T ss_dssp -------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCG
T ss_pred CccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcc
Confidence 54445566799999999998875 688999999999999999999999975442111000 0 000 0
Q ss_pred hhhhhcCCCCCCCc---hhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 923 ALDEMLDPRLPTPL---RNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 923 ~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
.......+...... ......+..+.+++.+||+.||.+|||++|+++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 257 VFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp GGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 00011111111110 0111234568899999999999999999999863
No 188
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.1e-37 Score=341.90 Aligned_cols=258 Identities=24% Similarity=0.350 Sum_probs=195.2
Q ss_pred HhcCCcccccccCCCceeEEEEEcC----CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccc-
Q 002069 699 ATKNFDDEHCIGNGGQGSVYKAELP----TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHAL- 773 (973)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~- 773 (973)
..++|.+.+.||+|+||.||+|... +++.||||++...... ....+.+.+|+.++++++||||+++++++.+..
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 110 (313)
T 3brb_A 32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSS-QREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSS 110 (313)
T ss_dssp CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCC-HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC---
T ss_pred CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccc-hhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccc
Confidence 3578999999999999999999543 3458999999765333 333578999999999999999999999997654
Q ss_pred ----eeEEEEEecCCCChHHHhccCc---cccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceE
Q 002069 774 ----HSFVVYEYLEMGSLAMILSNDA---AAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAH 846 (973)
Q Consensus 774 ----~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~k 846 (973)
..++||||+++++|.+++.... ....+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.+|
T Consensus 111 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~k 187 (313)
T 3brb_A 111 QGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVC 187 (313)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCEE
T ss_pred cCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEE
Confidence 3499999999999999984322 234689999999999999999999999 999999999999999999999
Q ss_pred EecccccccccCCCC--cccccccccCcccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcchhhhhhhhhhhhhhh
Q 002069 847 VSDFGISKFLKLGLS--NRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSICSSLSSNLNIA 923 (973)
Q Consensus 847 l~Dfg~a~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~ 923 (973)
|+|||.++....... ......+++.|+|||.+.+..++.++||||||+++|||++ |..||...... ..
T Consensus 188 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~---------~~ 258 (313)
T 3brb_A 188 VADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH---------EM 258 (313)
T ss_dssp ECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG---------GH
T ss_pred EeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH---------HH
Confidence 999999987654321 2233557889999999999999999999999999999999 89998743321 11
Q ss_pred hhhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 924 LDEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
............. ...+..+.+++.+||+.||.+|||++++++.|+
T Consensus 259 ~~~~~~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~ 304 (313)
T 3brb_A 259 YDYLLHGHRLKQP---EDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLE 304 (313)
T ss_dssp HHHHHTTCCCCCB---TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHcCCCCCCC---ccccHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 1111111111111 122345789999999999999999999999875
No 189
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=9.3e-38 Score=364.22 Aligned_cols=253 Identities=24% Similarity=0.320 Sum_probs=200.2
Q ss_pred hcCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVV 778 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 778 (973)
.++|++.+.||+|+||+||+|... +++.||||++....... .....+.+|+.+++.++||||+++++++.+....++|
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 114 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVST-SSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLV 114 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC------CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCc-hHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 457999999999999999999654 78999999987543222 1247789999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCC---CceEEeccccccc
Q 002069 779 YEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLE---YEAHVSDFGISKF 855 (973)
Q Consensus 779 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~---~~~kl~Dfg~a~~ 855 (973)
|||+++|+|.+++... ..+++.++..++.||+.|++|||+. +|+||||||+||+++.. +.+||+|||+++.
T Consensus 115 ~e~~~~g~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~ 188 (494)
T 3lij_A 115 MECYKGGELFDEIIHR---MKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAV 188 (494)
T ss_dssp EECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred EecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeE
Confidence 9999999999988643 3588999999999999999999999 99999999999999764 5599999999987
Q ss_pred ccCCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCC
Q 002069 856 LKLGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLPTP 935 (973)
Q Consensus 856 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 935 (973)
.... .......||+.|+|||++. ..++.++||||+||++|+|++|+.||...... .....+........
T Consensus 189 ~~~~-~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---------~~~~~i~~~~~~~~ 257 (494)
T 3lij_A 189 FENQ-KKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ---------EILRKVEKGKYTFD 257 (494)
T ss_dssp CBTT-BCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---------HHHHHHHHTCCCCC
T ss_pred CCCC-ccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH---------HHHHHHHhCCCCCC
Confidence 7644 3344567999999999886 46999999999999999999999999754321 11111111222211
Q ss_pred chhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 936 LRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 936 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
...+...+..+.+++.+||+.||.+|||++++++.
T Consensus 258 ~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 258 SPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp SGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred chhcccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 12222334457899999999999999999999864
No 190
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=1.6e-37 Score=337.67 Aligned_cols=253 Identities=24% Similarity=0.304 Sum_probs=200.3
Q ss_pred CCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEEEE
Q 002069 702 NFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVVYE 780 (973)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 780 (973)
+|.....||+|+||.||+|.. .+++.||||++..... ...+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 99 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDS---RYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFME 99 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC------HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCch---HHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEE
Confidence 455556899999999999964 5789999999875432 235779999999999999999999999999999999999
Q ss_pred ecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecC-CCceEEecccccccccCC
Q 002069 781 YLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNL-EYEAHVSDFGISKFLKLG 859 (973)
Q Consensus 781 ~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~-~~~~kl~Dfg~a~~~~~~ 859 (973)
|+++++|.+++........+++..+..++.|++.|++|||+. +++||||||+||+++. ++.+||+|||.++.....
T Consensus 100 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~ 176 (295)
T 2clq_A 100 QVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGI 176 (295)
T ss_dssp CCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-
T ss_pred eCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCC
Confidence 999999999997655445677899999999999999999999 9999999999999987 899999999999877554
Q ss_pred CCcccccccccCcccccccccCC--CCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCCch
Q 002069 860 LSNRTELAGTFGYIAPELAYTMK--VTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLPTPLR 937 (973)
Q Consensus 860 ~~~~~~~~g~~~y~aPE~~~~~~--~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 937 (973)
........|++.|+|||++.+.. ++.++||||||+++|+|++|+.||.......... .........+.++..
T Consensus 177 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~----~~~~~~~~~~~~~~~-- 250 (295)
T 2clq_A 177 NPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAM----FKVGMFKVHPEIPES-- 250 (295)
T ss_dssp ----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHH----HHHHHHCCCCCCCTT--
T ss_pred CCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHH----Hhhcccccccccccc--
Confidence 33445567999999999987653 7889999999999999999999997433211110 000111112222221
Q ss_pred hhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 938 NVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 938 ~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
.+..+.+++.+||+.||++||+++++++.
T Consensus 251 ----~~~~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 251 ----MSAEAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp ----SCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred ----CCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 22357789999999999999999999863
No 191
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=8.4e-38 Score=337.74 Aligned_cols=248 Identities=25% Similarity=0.379 Sum_probs=204.3
Q ss_pred hcCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVV 778 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 778 (973)
.++|++.+.||+|+||.||+|... +++.||||++.............+.+|+.++++++||||+++++++.+++..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 367999999999999999999654 6889999998643212222346789999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccC
Q 002069 779 YEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKL 858 (973)
Q Consensus 779 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 858 (973)
|||+++++|.+++... ..+++..++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+.....
T Consensus 93 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~ 166 (284)
T 2vgo_A 93 LEFAPRGELYKELQKH---GRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPS 166 (284)
T ss_dssp ECCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSS
T ss_pred EEeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCcc
Confidence 9999999999999654 3588999999999999999999999 999999999999999999999999999876543
Q ss_pred CCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcC--CCCCCCc
Q 002069 859 GLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLD--PRLPTPL 936 (973)
Q Consensus 859 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 936 (973)
. ......|++.|+|||.+.+..++.++||||||+++|+|++|+.||....... ....... ..++..
T Consensus 167 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---------~~~~~~~~~~~~~~~- 234 (284)
T 2vgo_A 167 L--RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE---------THRRIVNVDLKFPPF- 234 (284)
T ss_dssp S--CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH---------HHHHHHTTCCCCCTT-
T ss_pred c--ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhH---------HHHHHhccccCCCCc-
Confidence 2 2344678999999999999999999999999999999999999997433211 1111111 112211
Q ss_pred hhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 937 RNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 937 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
.+..+.+++.+|++.||.+|||++++++.
T Consensus 235 -----~~~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 235 -----LSDGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp -----SCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred -----CCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 22357789999999999999999999863
No 192
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=7.7e-38 Score=356.36 Aligned_cols=257 Identities=23% Similarity=0.255 Sum_probs=193.5
Q ss_pred HHhcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCc-----chhhHHHHHHHHHHhhcCCCCceeeeceeeec
Q 002069 698 RATKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPG-----EMACQQEFLNEGNALTKIRHRNIVKFYGFCSH 771 (973)
Q Consensus 698 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~ 771 (973)
...++|.+.+.||+|+||+||+|.. .+++.||||++...... .......+.+|+.++++++||||+++++++..
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 3467899999999999999999954 57899999998643211 11123458899999999999999999999865
Q ss_pred cceeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCC---CceEEe
Q 002069 772 ALHSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLE---YEAHVS 848 (973)
Q Consensus 772 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~---~~~kl~ 848 (973)
+ ..++||||+++++|.+++... ..+++.+++.++.|++.|++|||+. +|+||||||+||+++.+ +.+||+
T Consensus 212 ~-~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~ 284 (419)
T 3i6u_A 212 E-DYYIVLELMEGGELFDKVVGN---KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKIT 284 (419)
T ss_dssp S-EEEEEEECCTTCBGGGGTSSS---CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEEC
T ss_pred C-ceEEEEEcCCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEe
Confidence 4 578999999999999988654 3689999999999999999999999 99999999999999754 459999
Q ss_pred cccccccccCCCCcccccccccCccccccccc---CCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhh
Q 002069 849 DFGISKFLKLGLSNRTELAGTFGYIAPELAYT---MKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALD 925 (973)
Q Consensus 849 Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~---~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 925 (973)
|||+++..... .......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||....... ....
T Consensus 285 DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~--------~~~~ 355 (419)
T 3i6u_A 285 DFGHSKILGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV--------SLKD 355 (419)
T ss_dssp CSSTTTSCC------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC--------CHHH
T ss_pred ecccceecCCC-ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH--------HHHH
Confidence 99999876543 23345679999999999863 567889999999999999999999997432110 0111
Q ss_pred hhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 926 EMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
.................+..+.+++.+||+.||.+|||++|+++.
T Consensus 356 ~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 356 QITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp HHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHhcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 111122221111122234567899999999999999999999874
No 193
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.5e-37 Score=341.18 Aligned_cols=252 Identities=27% Similarity=0.399 Sum_probs=202.4
Q ss_pred HhcCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEE
Q 002069 699 ATKNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFV 777 (973)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 777 (973)
..++|++.+.||+|+||.||+|... +|+.||||++..... .+.+.+|+.++++++||||+++++++...+..++
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 101 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD-----LQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWI 101 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSC-----CHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHH-----HHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEE
Confidence 4578999999999999999999654 699999999875421 3678899999999999999999999999999999
Q ss_pred EEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEeccccccccc
Q 002069 778 VYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLK 857 (973)
Q Consensus 778 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 857 (973)
||||+++++|.+++... ...+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+....
T Consensus 102 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 176 (314)
T 3com_A 102 VMEYCGAGSVSDIIRLR--NKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLT 176 (314)
T ss_dssp EEECCTTEEHHHHHHHH--TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECB
T ss_pred EeecCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhh
Confidence 99999999999998632 24689999999999999999999999 99999999999999999999999999998776
Q ss_pred CCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCCch
Q 002069 858 LGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLPTPLR 937 (973)
Q Consensus 858 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 937 (973)
..........|++.|+|||.+.+..++.++||||||+++|+|++|+.||.......... .......+....
T Consensus 177 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~------~~~~~~~~~~~~--- 247 (314)
T 3com_A 177 DTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIF------MIPTNPPPTFRK--- 247 (314)
T ss_dssp TTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH------HHHHSCCCCCSS---
T ss_pred hhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHH------HHhcCCCcccCC---
Confidence 55444556679999999999999899999999999999999999999997543221110 011111111111
Q ss_pred hhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 938 NVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 938 ~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
....+..+.+++.+||+.||.+|||+.++++.
T Consensus 248 -~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 248 -PELWSDNFTDFVKQCLVKSPEQRATATQLLQH 279 (314)
T ss_dssp -GGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred -cccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 11223457899999999999999999999863
No 194
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=8.6e-38 Score=341.22 Aligned_cols=251 Identities=24% Similarity=0.313 Sum_probs=201.4
Q ss_pred hcCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVV 778 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 778 (973)
.++|.+.+.||+|+||.||+|... +|+.||+|++...... ..+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAF---RDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLV 84 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC---------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccccc---chHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEE
Confidence 467999999999999999999654 7999999999754322 246788999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeee---cCCCceEEeccccccc
Q 002069 779 YEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLL---NLEYEAHVSDFGISKF 855 (973)
Q Consensus 779 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill---~~~~~~kl~Dfg~a~~ 855 (973)
|||+++++|.+++... ..+++.+++.++.|++.|++|||+. +++||||||+||++ +.++.+|++|||.++.
T Consensus 85 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~ 158 (304)
T 2jam_A 85 MQLVSGGELFDRILER---GVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKM 158 (304)
T ss_dssp ECCCCSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCC
T ss_pred EEcCCCccHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCccee
Confidence 9999999999998643 3588999999999999999999999 99999999999999 7789999999999976
Q ss_pred ccCCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCC
Q 002069 856 LKLGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLPTP 935 (973)
Q Consensus 856 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 935 (973)
.... ......|++.|+|||.+.+..++.++||||+|+++|||++|+.||...... ..............
T Consensus 159 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---------~~~~~i~~~~~~~~ 227 (304)
T 2jam_A 159 EQNG--IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES---------KLFEKIKEGYYEFE 227 (304)
T ss_dssp CCCB--TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH---------HHHHHHHHCCCCCC
T ss_pred cCCC--ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH---------HHHHHHHcCCCCCC
Confidence 5432 233456899999999999999999999999999999999999999743321 01111111111111
Q ss_pred chhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 936 LRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 936 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
.......+..+.+++.+||+.||.+|||++++++.
T Consensus 228 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 228 SPFWDDISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp TTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred ccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 11111223457899999999999999999999863
No 195
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=9.8e-38 Score=343.80 Aligned_cols=253 Identities=22% Similarity=0.376 Sum_probs=196.1
Q ss_pred hcCCcccccccCCCceeEEEEEcC-CCC----EEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccce
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELP-TGE----IVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALH 774 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 774 (973)
..+|++.+.||+|+||+||+|.+. +++ +||+|.+...... ...+.+.+|+.++++++||||+++++++..+.
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~- 90 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP--KANKEILDEAYVMASVDNPHVCRLLGICLTST- 90 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSC--CCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCH--HHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-
Confidence 367999999999999999999653 554 3688887654322 23578999999999999999999999998764
Q ss_pred eEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccc
Q 002069 775 SFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISK 854 (973)
Q Consensus 775 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~ 854 (973)
.++|+||+++|+|.+++.... ..+++..++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.++
T Consensus 91 ~~~v~~~~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~ 165 (327)
T 3lzb_A 91 VQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 165 (327)
T ss_dssp EEEEECCCSSCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC--
T ss_pred ceEEEEecCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCccee
Confidence 789999999999999997543 4588999999999999999999999 99999999999999999999999999998
Q ss_pred cccCCCC--cccccccccCcccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcchhhhhhhhhhhhhhhhhhhcCCC
Q 002069 855 FLKLGLS--NRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSICSSLSSNLNIALDEMLDPR 931 (973)
Q Consensus 855 ~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (973)
....... ......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||+...... ............
T Consensus 166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~------~~~~~~~~~~~~ 239 (327)
T 3lzb_A 166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE------ISSILEKGERLP 239 (327)
T ss_dssp --------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG------HHHHHHTTCCCC
T ss_pred EccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH------HHHHHHcCCCCC
Confidence 7654322 2233456789999999999999999999999999999999 999997543210 111111111111
Q ss_pred CCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 932 LPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 932 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
.+.. .+..+.+++.+||+.||.+||+++|+++.|+
T Consensus 240 ~~~~------~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 274 (327)
T 3lzb_A 240 QPPI------CTIDVYMIMRKCWMIDADSRPKFRELIIEFS 274 (327)
T ss_dssp CCTT------BCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCcc------CCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 1111 2335788999999999999999999999874
No 196
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.5e-38 Score=348.02 Aligned_cols=267 Identities=20% Similarity=0.246 Sum_probs=199.0
Q ss_pred HHhcCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcc--hhhHHHHHHHHHHhhcCCCCceeeeceeeeccce
Q 002069 698 RATKNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGE--MACQQEFLNEGNALTKIRHRNIVKFYGFCSHALH 774 (973)
Q Consensus 698 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 774 (973)
...++|++.+.||+|+||.||+|... +|+.||||++....... ....+.+.+|+.++++++||||+++++++.+.+.
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 34578999999999999999999765 68999999987543221 1113468899999999999999999999999999
Q ss_pred eEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccc
Q 002069 775 SFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISK 854 (973)
Q Consensus 775 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~ 854 (973)
.++||||+++ ++.+++.... ..+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.++
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDNS--LVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAK 160 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTCC--SSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGS
T ss_pred eEEEEEcCCC-CHHHHHHhcC--cCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccce
Confidence 9999999985 8888886543 4578899999999999999999999 99999999999999999999999999998
Q ss_pred cccCCCCcccccccccCcccccccccC-CCCCccchHHHHHHHHHHHhCCCCCcchhhhhhh---hh---hhhhhhhh--
Q 002069 855 FLKLGLSNRTELAGTFGYIAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISSICSS---LS---SNLNIALD-- 925 (973)
Q Consensus 855 ~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~---~~---~~~~~~~~-- 925 (973)
.............||+.|+|||++.+. .++.++|||||||++|||++|..||......... .. ........
T Consensus 161 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 240 (346)
T 1ua2_A 161 SFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDM 240 (346)
T ss_dssp TTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSST
T ss_pred eccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhh
Confidence 776554455567899999999998764 4789999999999999999999998754321110 00 00000000
Q ss_pred ----hhc-CCCCCCCc--hhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 926 ----EML-DPRLPTPL--RNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 926 ----~~~-~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
+.. ....+... .........+.+++.+||+.||.+|||++|+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 241 CSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp TSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred ccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 000 00000000 0001223568899999999999999999999874
No 197
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1.5e-37 Score=345.58 Aligned_cols=263 Identities=22% Similarity=0.337 Sum_probs=205.9
Q ss_pred HHHHHhcCCcccccccCCCceeEEEEEcCCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhc--CCCCceeeeceeeecc
Q 002069 695 EIIRATKNFDDEHCIGNGGQGSVYKAELPTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTK--IRHRNIVKFYGFCSHA 772 (973)
Q Consensus 695 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~~ 772 (973)
.-....++|++.+.||+|+||.||+|.. +++.||||++... ....+.+|.+++.. ++||||+++++++...
T Consensus 36 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~------~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~ 108 (342)
T 1b6c_B 36 VQRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR------EERSWFREAEIYQTVMLRHENILGFIAADNKD 108 (342)
T ss_dssp HHHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG------GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECC
T ss_pred ecccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch------hHHHHHHHHHHHHHhhcCCCcEEEEEeeeccc
Confidence 3344567899999999999999999987 6899999998632 24667788888876 7999999999999876
Q ss_pred c----eeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHh--------hCCCCCeEeecCCCCCeeec
Q 002069 773 L----HSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMH--------TNCFPPIVHRDISSKNVLLN 840 (973)
Q Consensus 773 ~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH--------~~~~~~i~H~Dlk~~Nill~ 840 (973)
. ..++||||+++|+|.+++++. .+++.+++.++.|++.|++||| +. +|+||||||+||+++
T Consensus 109 ~~~~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~ 181 (342)
T 1b6c_B 109 NGTWTQLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVK 181 (342)
T ss_dssp CSSCCCEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEEC
T ss_pred CCccceeEEEEeecCCCcHHHHHhcc----CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEEC
Confidence 5 789999999999999999643 4789999999999999999999 77 999999999999999
Q ss_pred CCCceEEecccccccccCCCC----cccccccccCcccccccccCC------CCCccchHHHHHHHHHHHhC--------
Q 002069 841 LEYEAHVSDFGISKFLKLGLS----NRTELAGTFGYIAPELAYTMK------VTEKCDVYSFGVLALEVIKG-------- 902 (973)
Q Consensus 841 ~~~~~kl~Dfg~a~~~~~~~~----~~~~~~g~~~y~aPE~~~~~~------~~~~~Dv~slG~~l~el~tg-------- 902 (973)
.++.+||+|||.++....... ......||+.|+|||++.+.. ++.++|||||||++|||+||
T Consensus 182 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~ 261 (342)
T 1b6c_B 182 KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHE 261 (342)
T ss_dssp TTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCC
T ss_pred CCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCccc
Confidence 999999999999987755432 224457999999999987652 33689999999999999999
Q ss_pred --CCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 903 --KHPRDFISSICSSLSSNLNIALDEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 903 --~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
+.||.......................+.++..+. .......+.+++.+||+.||.+|||+++|++.|+
T Consensus 262 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 332 (342)
T 1b6c_B 262 DYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQ-SCEALRVMAKIMRECWYANGAARLTALRIKKTLS 332 (342)
T ss_dssp CCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGG-TSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHH
T ss_pred ccccCccccCcCcccHHHHHHHHHHHHhCCCCccccc-chhHHHHHHHHHHHHhccChhhCCCHHHHHHHHH
Confidence 67775332111001111111112223333332221 2345667899999999999999999999999875
No 198
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=1.7e-37 Score=337.93 Aligned_cols=254 Identities=24% Similarity=0.375 Sum_probs=199.0
Q ss_pred hcCCcccccccCCCceeEEEEEcCC----CCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeee-ccce
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELPT----GEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCS-HALH 774 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~-~~~~ 774 (973)
..+|++.+.||+|+||+||+|...+ +..||+|.+.... .....+.+.+|+.++++++||||+++++++. .++.
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 101 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT--DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGS 101 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCC--SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSC
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCC--CHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCc
Confidence 3578899999999999999996532 2368999987643 3334678999999999999999999999864 4567
Q ss_pred eEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccc
Q 002069 775 SFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISK 854 (973)
Q Consensus 775 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~ 854 (973)
.++||||+++++|.++++... ..+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.++
T Consensus 102 ~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~ 176 (298)
T 3f66_A 102 PLVVLPYMKHGDLRNFIRNET--HNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLAR 176 (298)
T ss_dssp CEEEEECCTTCBHHHHHHCTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGC
T ss_pred eEEEEeCCCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcccccc
Confidence 899999999999999997543 4578999999999999999999999 99999999999999999999999999998
Q ss_pred cccCCC----CcccccccccCcccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcchhhhhhhhhhhhhhhhhhhcC
Q 002069 855 FLKLGL----SNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSICSSLSSNLNIALDEMLD 929 (973)
Q Consensus 855 ~~~~~~----~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 929 (973)
...... .......+|+.|+|||.+.+..++.++||||+|+++|||++ |.+||....... ..........
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~------~~~~~~~~~~ 250 (298)
T 3f66_A 177 DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD------ITVYLLQGRR 250 (298)
T ss_dssp CCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT------HHHHHHTTCC
T ss_pred cccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH------HHHHHhcCCC
Confidence 664432 12234567889999999999999999999999999999999 556665322110 0011111111
Q ss_pred CCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 930 PRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 930 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
...+.. .+..+.+++.+||+.||.+|||++++++.|+
T Consensus 251 ~~~~~~------~~~~l~~li~~~l~~~p~~Rps~~ell~~L~ 287 (298)
T 3f66_A 251 LLQPEY------CPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 287 (298)
T ss_dssp CCCCTT------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCcc------CCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 111111 1235788999999999999999999999875
No 199
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=7.2e-38 Score=354.01 Aligned_cols=264 Identities=23% Similarity=0.322 Sum_probs=191.9
Q ss_pred HHhcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCC-CCceeeeceeeeccc--
Q 002069 698 RATKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIR-HRNIVKFYGFCSHAL-- 773 (973)
Q Consensus 698 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~-- 773 (973)
...++|++.+.||+|+||.||+|.. .+|+.||||++...... ....+.+.+|+.+++++. ||||+++++++..++
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~-~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~ 84 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQN-STDAQRTFREIMILTELSGHENIVNLLNVLRADNDR 84 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CC-HHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSS
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccC-hHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCC
Confidence 3467899999999999999999954 58999999998754333 334677889999999997 999999999997543
Q ss_pred eeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEeccccc
Q 002069 774 HSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGIS 853 (973)
Q Consensus 774 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a 853 (973)
..|+||||++ ++|.++++. ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+|
T Consensus 85 ~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a 156 (388)
T 3oz6_A 85 DVYLVFDYME-TDLHAVIRA----NILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLS 156 (388)
T ss_dssp CEEEEEECCS-EEHHHHHHH----TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEecccC-cCHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCccc
Confidence 6899999998 689988864 3588999999999999999999999 9999999999999999999999999999
Q ss_pred ccccCC---------------------CCcccccccccCccccccccc-CCCCCccchHHHHHHHHHHHhCCCCCcchhh
Q 002069 854 KFLKLG---------------------LSNRTELAGTFGYIAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISS 911 (973)
Q Consensus 854 ~~~~~~---------------------~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~ 911 (973)
+.+... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||.....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~ 236 (388)
T 3oz6_A 157 RSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSST 236 (388)
T ss_dssp EESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred ccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 865431 112234679999999999876 6789999999999999999999999975432
Q ss_pred hhhh------hhhhhhhhhh---------------hhc---CCCCCCCchhhH----------HHHHHHHHHHhcccCCC
Q 002069 912 ICSS------LSSNLNIALD---------------EML---DPRLPTPLRNVQ----------DKLISIMEVSISCLDES 957 (973)
Q Consensus 912 ~~~~------~~~~~~~~~~---------------~~~---~~~~~~~~~~~~----------~~~~~l~~li~~cl~~d 957 (973)
.... .......... ... .......+..+. .....+.+++.+||+.|
T Consensus 237 ~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~d 316 (388)
T 3oz6_A 237 MNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFN 316 (388)
T ss_dssp HHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSS
T ss_pred HHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccC
Confidence 1110 0000000000 000 000000010000 12345789999999999
Q ss_pred CCCCCCHHHHHHH
Q 002069 958 PTSRPTMQKVSQL 970 (973)
Q Consensus 958 P~~RPs~~ev~~~ 970 (973)
|.+|||++|+++.
T Consensus 317 P~~R~t~~e~l~H 329 (388)
T 3oz6_A 317 PNKRISANDALKH 329 (388)
T ss_dssp GGGSCCHHHHTTS
T ss_pred cccCCCHHHHhCC
Confidence 9999999999874
No 200
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1.3e-37 Score=343.45 Aligned_cols=262 Identities=23% Similarity=0.320 Sum_probs=206.8
Q ss_pred hcCCcccccccCCCceeEEEEEc-----CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeee--cc
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL-----PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCS--HA 772 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~--~~ 772 (973)
.++|++.+.||+|+||.||+|++ .+++.||||++... .....+.+.+|++++++++||||+++++++. +.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 98 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS---GPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGR 98 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSS
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC---CHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCC
Confidence 36899999999999999999973 47889999999754 2334577999999999999999999999886 45
Q ss_pred ceeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccc
Q 002069 773 LHSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGI 852 (973)
Q Consensus 773 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~ 852 (973)
...++||||+++++|.++++... ..+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 173 (327)
T 3lxl_A 99 QSLRLVMEYLPSGCLRDFLQRHR--ARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGL 173 (327)
T ss_dssp CEEEEEEECCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGG
T ss_pred ceEEEEEeecCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEccccc
Confidence 56899999999999999997533 3589999999999999999999999 999999999999999999999999999
Q ss_pred cccccCCCC---cccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhh------hhhhhhh
Q 002069 853 SKFLKLGLS---NRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSL------SSNLNIA 923 (973)
Q Consensus 853 a~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~------~~~~~~~ 923 (973)
++....... ......|++.|+|||++.+..++.++||||||+++|+|++|+.||.......... .......
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 253 (327)
T 3lxl_A 174 AKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRL 253 (327)
T ss_dssp CEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHH
T ss_pred ceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHH
Confidence 987754432 2233567888999999998889999999999999999999999987443211000 0000111
Q ss_pred hhhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 924 LDEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
............. ...+..+.+++.+||+.||.+|||++++++.|+
T Consensus 254 ~~~~~~~~~~~~~---~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 299 (327)
T 3lxl_A 254 LELLEEGQRLPAP---PACPAEVHELMKLCWAPSPQDRPSFSALGPQLD 299 (327)
T ss_dssp HHHHHTTCCCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHhhcccCCCCC---CcccHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 1111111111111 122345789999999999999999999999875
No 201
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1.2e-37 Score=343.81 Aligned_cols=256 Identities=24% Similarity=0.369 Sum_probs=201.8
Q ss_pred hcCCcccccccCCCceeEEEEEc------CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccc
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL------PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHAL 773 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 773 (973)
.++|++.+.||+|+||.||+|.+ .+++.||||++.... ......++.+|+.++++++||||+++++++.+.+
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 106 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC--SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL 106 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecccc--chhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC
Confidence 47899999999999999999974 357789999997442 2334578999999999999999999999999999
Q ss_pred eeEEEEEecCCCChHHHhccCcc----ccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCC---CceE
Q 002069 774 HSFVVYEYLEMGSLAMILSNDAA----AEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLE---YEAH 846 (973)
Q Consensus 774 ~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~---~~~k 846 (973)
..++||||+++++|.+++..... ...+++.+++.++.|++.|++|||+. +|+||||||+||+++.+ ..+|
T Consensus 107 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~k 183 (327)
T 2yfx_A 107 PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAK 183 (327)
T ss_dssp SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEE
T ss_pred CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEE
Confidence 99999999999999999976542 23588999999999999999999999 99999999999999844 5699
Q ss_pred EecccccccccCCCC--cccccccccCcccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcchhhhhhhhhhhhhhh
Q 002069 847 VSDFGISKFLKLGLS--NRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSICSSLSSNLNIA 923 (973)
Q Consensus 847 l~Dfg~a~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~ 923 (973)
|+|||.++....... ......|++.|+|||.+.+..++.++||||||+++|||+| |+.||...... ..
T Consensus 184 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~---------~~ 254 (327)
T 2yfx_A 184 IGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ---------EV 254 (327)
T ss_dssp ECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH---------HH
T ss_pred ECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH---------HH
Confidence 999999986543322 2234567899999999998899999999999999999998 99998743311 11
Q ss_pred hhhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 924 LDEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
.............. ..+..+.+++.+||+.||.+||+++++++.|+
T Consensus 255 ~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~ 300 (327)
T 2yfx_A 255 LEFVTSGGRMDPPK---NCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300 (327)
T ss_dssp HHHHHTTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHhcCCCCCCCC---CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 11111111111111 12345788999999999999999999999875
No 202
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=8.1e-38 Score=339.13 Aligned_cols=253 Identities=27% Similarity=0.375 Sum_probs=201.2
Q ss_pred hcCCcccc-cccCCCceeEEEEEc---CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeecccee
Q 002069 700 TKNFDDEH-CIGNGGQGSVYKAEL---PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHS 775 (973)
Q Consensus 700 ~~~~~~~~-~lg~G~~g~V~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 775 (973)
..+|++.+ .||+|+||+||+|.+ .+++.||||++..... .....+.+.+|+.++++++||||+++++++ ..+..
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~ 92 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN-DPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESW 92 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC------CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeeccccc-CHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCc
Confidence 46788888 999999999999943 3568899999976532 233467899999999999999999999999 55678
Q ss_pred EEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEeccccccc
Q 002069 776 FVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKF 855 (973)
Q Consensus 776 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~ 855 (973)
++||||+++++|.+++... ..+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||.++.
T Consensus 93 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 166 (291)
T 1xbb_A 93 MLVMEMAELGPLNKYLQQN---RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKA 166 (291)
T ss_dssp EEEEECCTTEEHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEEEeCCCCCHHHHHHhC---cCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCccee
Confidence 9999999999999999754 3588999999999999999999999 999999999999999999999999999987
Q ss_pred ccCCCCc---ccccccccCcccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcchhhhhhhhhhhhhhhhhhhcCCC
Q 002069 856 LKLGLSN---RTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSICSSLSSNLNIALDEMLDPR 931 (973)
Q Consensus 856 ~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (973)
....... .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||....... ..........+.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~------~~~~~~~~~~~~ 240 (291)
T 1xbb_A 167 LRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE------VTAMLEKGERMG 240 (291)
T ss_dssp CCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH------HHHHHHTTCCCC
T ss_pred eccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHH------HHHHHHcCCCCC
Confidence 7544322 122346788999999988889999999999999999999 999997543210 111111111112
Q ss_pred CCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 932 LPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 932 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
.+. ..+..+.+++.+||+.||.+||+++++++.|+
T Consensus 241 ~~~------~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~ 275 (291)
T 1xbb_A 241 CPA------GCPREMYDLMNLCWTYDVENRPGFAAVELRLR 275 (291)
T ss_dssp CCT------TCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred CCC------CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 211 12345788999999999999999999999875
No 203
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=2.2e-37 Score=333.14 Aligned_cols=253 Identities=25% Similarity=0.371 Sum_probs=204.9
Q ss_pred HhcCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEE
Q 002069 699 ATKNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFV 777 (973)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 777 (973)
..++|++.+.||+|+||.||+|... +++.||||++...... ...+.+.+|+.+++.++||||+++++++.+++..++
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 82 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 82 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCT--THHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccch--hhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEE
Confidence 3467999999999999999999654 7899999998643222 235788999999999999999999999999999999
Q ss_pred EEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEeccccccccc
Q 002069 778 VYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLK 857 (973)
Q Consensus 778 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 857 (973)
||||+++++|.+++... ..+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+|++|||.+....
T Consensus 83 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 156 (276)
T 2yex_A 83 FLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFR 156 (276)
T ss_dssp EEECCTTEEGGGGSBTT---TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECE
T ss_pred EEEecCCCcHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccC
Confidence 99999999999998653 3588999999999999999999999 99999999999999999999999999998765
Q ss_pred CCC--CcccccccccCcccccccccCCC-CCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCC-CCC
Q 002069 858 LGL--SNRTELAGTFGYIAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDP-RLP 933 (973)
Q Consensus 858 ~~~--~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 933 (973)
... .......|++.|+|||.+.+..+ +.++||||||+++|||++|+.||.......... ...... ...
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~--------~~~~~~~~~~ 228 (276)
T 2yex_A 157 YNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY--------SDWKEKKTYL 228 (276)
T ss_dssp ETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHH--------HHHHTTCTTS
T ss_pred CCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHH--------HHhhhccccc
Confidence 332 12345678999999999987765 678999999999999999999997543211111 011111 111
Q ss_pred CCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 934 TPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 934 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
... ...+..+.+++.+||+.||.+|||++|+++.
T Consensus 229 ~~~---~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 229 NPW---KKIDSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp TTG---GGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred Cch---hhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 111 1223457789999999999999999999864
No 204
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=1e-37 Score=335.70 Aligned_cols=251 Identities=24% Similarity=0.318 Sum_probs=195.7
Q ss_pred hcCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVV 778 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 778 (973)
.++|++.+.||+|+||.||+|... +++.||||++...........+.+.+|+.+++.++||||+++++++..++..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 368999999999999999999765 7999999998643222223356889999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccC
Q 002069 779 YEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKL 858 (973)
Q Consensus 779 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 858 (973)
|||+++++|.+++... ..+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+|++|||.+.....
T Consensus 90 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~ 163 (276)
T 2h6d_A 90 MEYVSGGELFDYICKH---GRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 163 (276)
T ss_dssp EECCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC
T ss_pred EeccCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCC
Confidence 9999999999999653 3588999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCcccccccccCcccccccccCCC-CCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCCch
Q 002069 859 GLSNRTELAGTFGYIAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLPTPLR 937 (973)
Q Consensus 859 ~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 937 (973)
. .......|++.|+|||.+.+..+ +.++||||+|+++|+|++|+.||+...... ........ ....+..
T Consensus 164 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~------~~~~~~~~-~~~~~~~-- 233 (276)
T 2h6d_A 164 G-EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPT------LFKKIRGG-VFYIPEY-- 233 (276)
T ss_dssp --------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHC-CCCCCTT--
T ss_pred C-cceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH------HHHHhhcC-cccCchh--
Confidence 3 22334578999999999987765 589999999999999999999997433110 00001110 0111111
Q ss_pred hhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 938 NVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 938 ~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
....+.+++.+||+.||.+|||++++++.
T Consensus 234 ----~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 234 ----LNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp ----SCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred ----cCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 12347789999999999999999999874
No 205
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.1e-37 Score=335.66 Aligned_cols=248 Identities=28% Similarity=0.408 Sum_probs=195.3
Q ss_pred hcCCcccccccCCCceeEEEEEcCCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeecc-ceeEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELPTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHA-LHSFVV 778 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-~~~~lv 778 (973)
.++|++.+.||+|+||+||+|+. +|+.||||++.... ..+.+.+|+.++++++||||+++++++.+. +..++|
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv 93 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 93 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC-------HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEE
T ss_pred hhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh-----HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEE
Confidence 46899999999999999999987 58899999997542 247789999999999999999999997554 478999
Q ss_pred EEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccC
Q 002069 779 YEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKL 858 (973)
Q Consensus 779 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 858 (973)
|||+++++|.+++.... ...+++..++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||.++....
T Consensus 94 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~ 169 (278)
T 1byg_A 94 TEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 169 (278)
T ss_dssp ECCCTTEEHHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC------
T ss_pred EecCCCCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeeccccccccc
Confidence 99999999999996543 23478999999999999999999999 999999999999999999999999999876543
Q ss_pred CCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCCch
Q 002069 859 GLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSICSSLSSNLNIALDEMLDPRLPTPLR 937 (973)
Q Consensus 859 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 937 (973)
. .....+++.|+|||.+.+..++.++||||||+++|||+| |+.||...... ..............+.
T Consensus 170 ~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~------~~~~~~~~~~~~~~~~--- 237 (278)
T 1byg_A 170 T---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK------DVVPRVEKGYKMDAPD--- 237 (278)
T ss_dssp ---------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG------GHHHHHTTTCCCCCCT---
T ss_pred c---ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH------HHHHHHhcCCCCCCcc---
Confidence 2 223467889999999998899999999999999999998 99998743211 0001111111111111
Q ss_pred hhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 938 NVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 938 ~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
..+..+.+++.+||+.||.+|||+.++++.|+
T Consensus 238 ---~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~ 269 (278)
T 1byg_A 238 ---GCPPAVYEVMKNCWHLDAAMRPSFLQLREQLE 269 (278)
T ss_dssp ---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ---cCCHHHHHHHHHHhcCChhhCCCHHHHHHHHH
Confidence 12345788999999999999999999999875
No 206
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=3.1e-38 Score=347.01 Aligned_cols=264 Identities=22% Similarity=0.349 Sum_probs=209.4
Q ss_pred HHHHHHHhcCCcccccccCCCceeEEEEEc------CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcC-CCCceeee
Q 002069 693 HEEIIRATKNFDDEHCIGNGGQGSVYKAEL------PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKI-RHRNIVKF 765 (973)
Q Consensus 693 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~ 765 (973)
........++|++.+.||+|+||+||+|.+ .+++.||||++..... ....+.+.+|+.+++++ +||||+++
T Consensus 19 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~hp~iv~~ 96 (316)
T 2xir_A 19 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT--HSEHRALMSELKILIHIGHHLNVVNL 96 (316)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC--HHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCC--cHHHHHHHHHHHHHHhcccCCCeeeE
Confidence 334444568899999999999999999963 3568999999976532 23457899999999999 79999999
Q ss_pred ceeeeccc-eeEEEEEecCCCChHHHhccCcc-------------ccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeec
Q 002069 766 YGFCSHAL-HSFVVYEYLEMGSLAMILSNDAA-------------AEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRD 831 (973)
Q Consensus 766 ~~~~~~~~-~~~lv~e~~~~~~L~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~D 831 (973)
++++...+ ..++||||+++++|.+++..... ...+++.+++.++.|++.|++|||+. +|+|||
T Consensus 97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~d 173 (316)
T 2xir_A 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRD 173 (316)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---Cccccc
Confidence 99987654 58999999999999999976543 12378999999999999999999999 999999
Q ss_pred CCCCCeeecCCCceEEecccccccccCCCC--cccccccccCcccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcc
Q 002069 832 ISSKNVLLNLEYEAHVSDFGISKFLKLGLS--NRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDF 908 (973)
Q Consensus 832 lk~~Nill~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~ 908 (973)
|||+||+++.++.+||+|||.++....... ......||+.|+|||++.+..++.++||||||+++|||+| |+.||..
T Consensus 174 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~ 253 (316)
T 2xir_A 174 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253 (316)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred CccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcc
Confidence 999999999999999999999987654322 2234567889999999999999999999999999999998 9999974
Q ss_pred hhhhhhhhhhhhhhhhhhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 909 ISSICSSLSSNLNIALDEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 909 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
...... .............+.. ....+.+++.+||+.||.+|||++++++.|+
T Consensus 254 ~~~~~~-----~~~~~~~~~~~~~~~~------~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 306 (316)
T 2xir_A 254 VKIDEE-----FCRRLKEGTRMRAPDY------TTPEMYQTMLDCWHGEPSQRPTFSELVEHLG 306 (316)
T ss_dssp CCCSHH-----HHHHHHHTCCCCCCTT------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cchhHH-----HHHHhccCccCCCCCC------CCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 331110 0111111111111111 2235788999999999999999999999875
No 207
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=1.3e-37 Score=343.46 Aligned_cols=255 Identities=24% Similarity=0.374 Sum_probs=201.2
Q ss_pred hcCCcccccccCCCceeEEEEEcC-CCCE--EEEEEcCCCCCcchhhHHHHHHHHHHhhcC-CCCceeeeceeeecccee
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELP-TGEI--VAVKKFHSPLPGEMACQQEFLNEGNALTKI-RHRNIVKFYGFCSHALHS 775 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~--vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 775 (973)
.++|++.+.||+|+||.||+|... +++. ||||++..... ....+.+.+|+.+++++ +||||+++++++.+.+..
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~ 101 (327)
T 1fvr_A 24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS--KDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL 101 (327)
T ss_dssp GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC--------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEE
T ss_pred HHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccc--hHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCce
Confidence 368999999999999999999654 5664 49999875322 22356789999999999 999999999999999999
Q ss_pred EEEEEecCCCChHHHhccCc-------------cccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCC
Q 002069 776 FVVYEYLEMGSLAMILSNDA-------------AAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLE 842 (973)
Q Consensus 776 ~lv~e~~~~~~L~~~l~~~~-------------~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~ 842 (973)
++||||+++++|.+++.... ....+++.+++.++.|++.|++|||+. +|+||||||+||+++.+
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~ 178 (327)
T 1fvr_A 102 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGEN 178 (327)
T ss_dssp EEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGG
T ss_pred EEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCC
Confidence 99999999999999997653 234689999999999999999999999 99999999999999999
Q ss_pred CceEEecccccccccCCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcchhhhhhhhhhhhh
Q 002069 843 YEAHVSDFGISKFLKLGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSICSSLSSNLN 921 (973)
Q Consensus 843 ~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~ 921 (973)
+.+||+|||+++..... .......+++.|+|||++.+..++.++||||||+++|||++ |+.||....... ..
T Consensus 179 ~~~kL~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~------~~ 251 (327)
T 1fvr_A 179 YVAKIADFGLSRGQEVY-VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE------LY 251 (327)
T ss_dssp GCEEECCTTCEESSCEE-CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH------HH
T ss_pred CeEEEcccCcCcccccc-ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHH------HH
Confidence 99999999998744322 12233457889999999988889999999999999999998 999997433210 00
Q ss_pred hhhhhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 922 IALDEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
...........+. ..+..+.+++.+||+.||.+|||++++++.|+
T Consensus 252 ~~~~~~~~~~~~~------~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 296 (327)
T 1fvr_A 252 EKLPQGYRLEKPL------NCDDEVYDLMRQCWREKPYERPSFAQILVSLN 296 (327)
T ss_dssp HHGGGTCCCCCCT------TBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHhhcCCCCCCCC------CCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 1111111111111 12345788999999999999999999999874
No 208
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1e-38 Score=359.38 Aligned_cols=246 Identities=13% Similarity=0.096 Sum_probs=191.2
Q ss_pred hcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHH---HHhhcCCCCceeeec-------ee
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEG---NALTKIRHRNIVKFY-------GF 768 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~---~~l~~l~h~niv~~~-------~~ 768 (973)
.++|++.+.||+|+||+||+|.. .+|+.||||++...........+.+.+|+ ..+++++|||||+++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 46799999999999999999976 47999999999754433444568899999 556666899999998 55
Q ss_pred eeccc-----------------eeEEEEEecCCCChHHHhccCcc----ccCCCHHHHHHHHHHHHHHHHHHhhCCCCCe
Q 002069 769 CSHAL-----------------HSFVVYEYLEMGSLAMILSNDAA----AEEFGWTKRMNAIKGVADALLYMHTNCFPPI 827 (973)
Q Consensus 769 ~~~~~-----------------~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i 827 (973)
+..++ ..++||||+ +|+|.++++.... ...+++..++.++.||+.||+|||++ +|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 54442 278999999 5899999975431 11234588889999999999999999 99
Q ss_pred EeecCCCCCeeecCCCceEEecccccccccCCCCcccccccccCcccccccccC-----------CCCCccchHHHHHHH
Q 002069 828 VHRDISSKNVLLNLEYEAHVSDFGISKFLKLGLSNRTELAGTFGYIAPELAYTM-----------KVTEKCDVYSFGVLA 896 (973)
Q Consensus 828 ~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~-----------~~~~~~Dv~slG~~l 896 (973)
+||||||+||+++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||++
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~---~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il 303 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA---RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVI 303 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC---EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC---cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHH
Confidence 9999999999999999999999999986432 3345567 999999999887 899999999999999
Q ss_pred HHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 897 LEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 897 ~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
|||++|+.||....... ........ . . ..+..+.+++.+||+.||.+|||+.++++.
T Consensus 304 ~elltg~~Pf~~~~~~~---------~~~~~~~~-~-~------~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 360 (377)
T 3byv_A 304 YWIWCADLPITKDAALG---------GSEWIFRS-C-K------NIPQPVRALLEGFLRYPKEDRLLPLQAMET 360 (377)
T ss_dssp HHHHHSSCCC------C---------CSGGGGSS-C-C------CCCHHHHHHHHHHTCSSGGGCCCHHHHHTS
T ss_pred HHHHHCCCCCccccccc---------chhhhhhh-c-c------CCCHHHHHHHHHHcCCCchhCCCHHHHhhC
Confidence 99999999997433210 11111111 0 0 112357789999999999999999999863
No 209
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=1.4e-37 Score=335.41 Aligned_cols=253 Identities=21% Similarity=0.319 Sum_probs=200.2
Q ss_pred hcCCcccccccCCCceeEEEEEcC----CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeecccee
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELP----TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHS 775 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 775 (973)
.++|++.+.||+|+||+||+|.+. ++..||||++.... .....+.+.+|+.++++++||||+++++++.++ ..
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~ 87 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC--TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PT 87 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS--CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SC
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc--CchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CC
Confidence 468999999999999999999643 23469999987643 233468899999999999999999999998754 56
Q ss_pred EEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEeccccccc
Q 002069 776 FVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKF 855 (973)
Q Consensus 776 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~ 855 (973)
++||||+++++|.+++.... ..+++..++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||.++.
T Consensus 88 ~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 162 (281)
T 3cc6_A 88 WIIMELYPYGELGHYLERNK--NSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRY 162 (281)
T ss_dssp EEEEECCTTCBHHHHHHHHT--TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGC
T ss_pred EEEEecCCCCCHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCcc
Confidence 89999999999999996532 4588999999999999999999999 999999999999999999999999999987
Q ss_pred ccCCCC-cccccccccCcccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcchhhhhhhhhhhhhhhhhhhcCCCCC
Q 002069 856 LKLGLS-NRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSICSSLSSNLNIALDEMLDPRLP 933 (973)
Q Consensus 856 ~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 933 (973)
...... ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||....... .............+
T Consensus 163 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~------~~~~~~~~~~~~~~ 236 (281)
T 3cc6_A 163 IEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD------VIGVLEKGDRLPKP 236 (281)
T ss_dssp C---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG------HHHHHHHTCCCCCC
T ss_pred cccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH------HHHHHhcCCCCCCC
Confidence 654322 2234557889999999998899999999999999999998 999996432210 01111111111111
Q ss_pred CCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 934 TPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 934 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
.. .+..+.+++.+||+.||.+|||++++++.|+
T Consensus 237 ~~------~~~~l~~li~~~l~~~p~~Rps~~ell~~L~ 269 (281)
T 3cc6_A 237 DL------CPPVLYTLMTRCWDYDPSDRPRFTELVCSLS 269 (281)
T ss_dssp TT------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CC------CCHHHHHHHHHHccCCchhCcCHHHHHHHHH
Confidence 11 2345788999999999999999999999875
No 210
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=9e-38 Score=346.47 Aligned_cols=262 Identities=28% Similarity=0.390 Sum_probs=197.1
Q ss_pred hcCCcccccccCCCceeEEEEEcCCCCEEEEEEcCCCCCcchhhHHHHHHHHHH--hhcCCCCceeeeceeee-----cc
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELPTGEIVAVKKFHSPLPGEMACQQEFLNEGNA--LTKIRHRNIVKFYGFCS-----HA 772 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~--l~~l~h~niv~~~~~~~-----~~ 772 (973)
.++|++.+.||+|+||+||+|+. +++.||||++... ....+..|.++ +..++||||+++++++. ..
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 84 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFA------NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGR 84 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGG------GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSC
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeecc------chhhHHHHHHHHHHHhccCcchhhheecccccccCCC
Confidence 46899999999999999999977 7899999998632 13444444444 45589999999997543 23
Q ss_pred ceeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCC------CCCeEeecCCCCCeeecCCCceE
Q 002069 773 LHSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNC------FPPIVHRDISSKNVLLNLEYEAH 846 (973)
Q Consensus 773 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~------~~~i~H~Dlk~~Nill~~~~~~k 846 (973)
...++||||+++|+|.++++... .++..++.++.|++.|++|||+.. .++|+||||||+||+++.++.+|
T Consensus 85 ~~~~lv~e~~~~g~L~~~l~~~~----~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~k 160 (336)
T 3g2f_A 85 MEYLLVMEYYPNGSLXKYLSLHT----SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCV 160 (336)
T ss_dssp EEEEEEECCCTTCBHHHHHHHCC----BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEE
T ss_pred ceEEEEEecCCCCcHHHHHhhcc----cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEE
Confidence 46789999999999999996543 478999999999999999999872 22899999999999999999999
Q ss_pred EecccccccccCCC--------CcccccccccCccccccccc-------CCCCCccchHHHHHHHHHHHhCCCCCcchhh
Q 002069 847 VSDFGISKFLKLGL--------SNRTELAGTFGYIAPELAYT-------MKVTEKCDVYSFGVLALEVIKGKHPRDFISS 911 (973)
Q Consensus 847 l~Dfg~a~~~~~~~--------~~~~~~~g~~~y~aPE~~~~-------~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~ 911 (973)
|+|||+++.+.... .......||+.|+|||++.+ ..++.++|||||||++|||++|..||.....
T Consensus 161 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~ 240 (336)
T 3g2f_A 161 ISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGES 240 (336)
T ss_dssp ECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSC
T ss_pred EeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccc
Confidence 99999998765321 12234579999999999876 4566789999999999999999877642211
Q ss_pred hhh---h----hh--hhh----hhhhhhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 912 ICS---S----LS--SNL----NIALDEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 912 ~~~---~----~~--~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
... . .. ... .........+.++..+......+..+.+++.+||+.||++|||++|+++.|+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~ 314 (336)
T 3g2f_A 241 VPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMA 314 (336)
T ss_dssp CCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred hhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHH
Confidence 000 0 00 000 0011122234444444444456667999999999999999999999999875
No 211
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=7.4e-38 Score=367.37 Aligned_cols=252 Identities=24% Similarity=0.393 Sum_probs=205.6
Q ss_pred hcCCcccccccCCCceeEEEEEcCCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELPTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVVY 779 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 779 (973)
.++|++.+.||+|+||.||+|.+.+++.||||+++..... .++|.+|+.++++++||||+++++++.+ +..++||
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~ 340 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 340 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSC----HHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCCC----HHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEee
Confidence 4678999999999999999999888888999999864322 4689999999999999999999999976 5789999
Q ss_pred EecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccCC
Q 002069 780 EYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKLG 859 (973)
Q Consensus 780 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 859 (973)
||+++|+|.++++... ...+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 341 e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 416 (535)
T 2h8h_A 341 EYMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDN 416 (535)
T ss_dssp CCCTTEEHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCH
T ss_pred ehhcCCcHHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCCC
Confidence 9999999999996432 23588999999999999999999999 9999999999999999999999999999876532
Q ss_pred CC-cccccccccCcccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCCch
Q 002069 860 LS-NRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSICSSLSSNLNIALDEMLDPRLPTPLR 937 (973)
Q Consensus 860 ~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 937 (973)
.. ......++..|+|||++.+..++.++|||||||++|||++ |+.||....... ....+........+.
T Consensus 417 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~------~~~~i~~~~~~~~~~--- 487 (535)
T 2h8h_A 417 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE------VLDQVERGYRMPCPP--- 487 (535)
T ss_dssp HHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHH------HHHHHHTTCCCCCCT---
T ss_pred ceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH------HHHHHHcCCCCCCCC---
Confidence 11 1223456789999999998899999999999999999999 999997443210 011111111111111
Q ss_pred hhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 938 NVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 938 ~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
..+..+.+++.+||+.||++|||+++|++.|+
T Consensus 488 ---~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~ 519 (535)
T 2h8h_A 488 ---ECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 519 (535)
T ss_dssp ---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ---CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 22345788999999999999999999999875
No 212
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=2.3e-37 Score=335.33 Aligned_cols=249 Identities=22% Similarity=0.302 Sum_probs=201.0
Q ss_pred HhcCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcC-CCCceeeeceeeeccceeE
Q 002069 699 ATKNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKI-RHRNIVKFYGFCSHALHSF 776 (973)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 776 (973)
..++|++.+.||+|+||+||+|... +++.||||++....... ....++.+|+..+.++ +||||+++++++.+++..+
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~ 87 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGS-VDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHML 87 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTS-HHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEeccccccc-HHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEE
Confidence 4577999999999999999999664 89999999998654333 2357788999999999 9999999999999999999
Q ss_pred EEEEecCCCChHHHhccCcc-ccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCC-------------
Q 002069 777 VVYEYLEMGSLAMILSNDAA-AEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLE------------- 842 (973)
Q Consensus 777 lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~------------- 842 (973)
+||||+++++|.+++..... ...+++.+++.++.|++.|++|||++ +|+||||||+||+++.+
T Consensus 88 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~ 164 (289)
T 1x8b_A 88 IQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDED 164 (289)
T ss_dssp EEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC---------------
T ss_pred EEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCcccccccccc
Confidence 99999999999999975432 24689999999999999999999999 99999999999999844
Q ss_pred ------CceEEecccccccccCCCCcccccccccCcccccccccC-CCCCccchHHHHHHHHHHHhCCCCCcchhhhhhh
Q 002069 843 ------YEAHVSDFGISKFLKLGLSNRTELAGTFGYIAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISSICSS 915 (973)
Q Consensus 843 ------~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~ 915 (973)
..+|++|||.+...... ....||+.|+|||.+.+. .++.++|||||||++|||++|..|+.......
T Consensus 165 ~~~~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~-- 238 (289)
T 1x8b_A 165 DWASNKVMFKIGDLGHVTRISSP----QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWH-- 238 (289)
T ss_dssp -----CCCEEECCCTTCEETTCS----CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHHH--
T ss_pred cccCCceEEEEcccccccccCCc----cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHHH--
Confidence 47999999999876543 234589999999998766 56689999999999999999998765322111
Q ss_pred hhhhhhhhhhhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 916 LSSNLNIALDEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
.......+.++.. .+..+.+++.+||+.||.+|||++++++.
T Consensus 239 -------~~~~~~~~~~~~~------~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 239 -------EIRQGRLPRIPQV------LSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp -------HHHTTCCCCCSSC------CCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred -------HHHcCCCCCCCcc------cCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 1111111222221 22357889999999999999999999874
No 213
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=2.1e-37 Score=371.80 Aligned_cols=252 Identities=20% Similarity=0.277 Sum_probs=206.8
Q ss_pred HhcCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcC-CCCceeeeceeeeccceeE
Q 002069 699 ATKNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKI-RHRNIVKFYGFCSHALHSF 776 (973)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 776 (973)
...+|++.+.||+|+||.||+|+.. +++.||||+++..........+.+..|..++..+ +||+|+.+++++.+.+..|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 4578999999999999999999654 7889999998743211222346788899999887 7999999999999999999
Q ss_pred EEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccc
Q 002069 777 VVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFL 856 (973)
Q Consensus 777 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~ 856 (973)
+||||+++|+|.++++.. ..+++.+++.++.||+.||+|||+. +|+||||||+|||++.++++||+|||+|+..
T Consensus 419 lV~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~~ 492 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQV---GRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 492 (674)
T ss_dssp EEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEEC
T ss_pred EEEeCcCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeecc
Confidence 999999999999999754 3689999999999999999999999 9999999999999999999999999999865
Q ss_pred cCCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCCc
Q 002069 857 KLGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLPTPL 936 (973)
Q Consensus 857 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 936 (973)
...........||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......++......+.
T Consensus 493 ~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~---------~~~~~~i~~~~~~~p~ 563 (674)
T 3pfq_A 493 IWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE---------DELFQSIMEHNVAYPK 563 (674)
T ss_dssp CCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH---------HHHHHHHHSSCCCCCT
T ss_pred ccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH---------HHHHHHHHhCCCCCCc
Confidence 5444455667899999999999999999999999999999999999999975432 1122222222222111
Q ss_pred hhhHHHHHHHHHHHhcccCCCCCCCCCH-----HHHHH
Q 002069 937 RNVQDKLISIMEVSISCLDESPTSRPTM-----QKVSQ 969 (973)
Q Consensus 937 ~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~ev~~ 969 (973)
.....+.+++.+||+.||.+||++ +||.+
T Consensus 564 ----~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 564 ----SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp ----TSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred ----cCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 123457889999999999999997 67664
No 214
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.7e-37 Score=344.42 Aligned_cols=259 Identities=21% Similarity=0.266 Sum_probs=196.2
Q ss_pred hcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccc-----
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHAL----- 773 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----- 773 (973)
.++|++.+.||+|+||.||+|.. .+|+.||||++..... .....+.+.+|+.+++.++||||+++++++....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 102 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQ-SELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF 102 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTS-SHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCcccc-CHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccC
Confidence 46799999999999999999965 5899999999976543 3344678899999999999999999999997653
Q ss_pred -eeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccc
Q 002069 774 -HSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGI 852 (973)
Q Consensus 774 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~ 852 (973)
..|+||||+ +++|.++++. ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 103 ~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 174 (367)
T 1cm8_A 103 TDFYLVMPFM-GTDLGKLMKH----EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGL 174 (367)
T ss_dssp CCCEEEEECC-SEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred ceEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeec
Confidence 459999999 7899999874 3588999999999999999999999 999999999999999999999999999
Q ss_pred cccccCCCCcccccccccCccccccccc-CCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhh------hhhhhhhhh-
Q 002069 853 SKFLKLGLSNRTELAGTFGYIAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSS------LSSNLNIAL- 924 (973)
Q Consensus 853 a~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~------~~~~~~~~~- 924 (973)
++.... ......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||......... .+.......
T Consensus 175 a~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~ 251 (367)
T 1cm8_A 175 ARQADS---EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQ 251 (367)
T ss_dssp CEECCS---SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHH
T ss_pred cccccc---ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 987643 2345678999999999877 67999999999999999999999999754321100 000000000
Q ss_pred ----------hhhcCCCCCCCch-hhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 925 ----------DEMLDPRLPTPLR-NVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 925 ----------~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
...+.......+. ........+.+++.+|++.||.+|||++|+++.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 252 RLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp TCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 0000000001110 011223457889999999999999999999873
No 215
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=3.7e-37 Score=356.17 Aligned_cols=195 Identities=24% Similarity=0.335 Sum_probs=155.3
Q ss_pred hcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeec-----cc
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSH-----AL 773 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~-----~~ 773 (973)
.++|++.+.||+|+||+||+|.. .+++.||||++..... .....+.+.+|+.++++++||||+++++++.. ..
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 130 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFE-DLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFD 130 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTS-SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhc-CHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCc
Confidence 36899999999999999999955 4899999999875433 33446789999999999999999999999843 35
Q ss_pred eeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEeccccc
Q 002069 774 HSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGIS 853 (973)
Q Consensus 774 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a 853 (973)
..|+||||++ ++|.++++.. ..+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+|
T Consensus 131 ~~~lv~e~~~-~~L~~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla 203 (458)
T 3rp9_A 131 ELYVVLEIAD-SDFKKLFRTP---VYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLA 203 (458)
T ss_dssp CEEEEECCCS-EEHHHHHHSS---CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEeccc-cchhhhcccC---CCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccc
Confidence 6899999985 7899988654 3589999999999999999999999 9999999999999999999999999999
Q ss_pred ccccCCC---------------------------CcccccccccCccccccc-ccCCCCCccchHHHHHHHHHHHhC
Q 002069 854 KFLKLGL---------------------------SNRTELAGTFGYIAPELA-YTMKVTEKCDVYSFGVLALEVIKG 902 (973)
Q Consensus 854 ~~~~~~~---------------------------~~~~~~~g~~~y~aPE~~-~~~~~~~~~Dv~slG~~l~el~tg 902 (973)
+...... ......+||+.|+|||++ .+..++.++|||||||++|||++|
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 204 RTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp BCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred hhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 8765321 122345789999999976 566799999999999999999993
No 216
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=1.2e-37 Score=337.51 Aligned_cols=247 Identities=22% Similarity=0.388 Sum_probs=198.6
Q ss_pred hcCCcccccccCCCceeEEEEEcC-CC-------CEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeec
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELP-TG-------EIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSH 771 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~-~~-------~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~ 771 (973)
.++|++.+.||+|+||+||+|... ++ +.||+|++... .....+.+.+|+.++++++||||+++++++.+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 83 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKA---HRNYSESFFEAASMMSKLSHKHLVLNYGVCVC 83 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGG---GGGGHHHHHHHHHHHHTSCCTTBCCEEEEECC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccc---cHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEe
Confidence 367999999999999999999654 33 47999998643 23346789999999999999999999999999
Q ss_pred cceeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCc-------
Q 002069 772 ALHSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYE------- 844 (973)
Q Consensus 772 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~------- 844 (973)
++..++||||+++++|.++++... ..+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.
T Consensus 84 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~ 158 (289)
T 4fvq_A 84 GDENILVQEFVKFGSLDTYLKKNK--NCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPP 158 (289)
T ss_dssp TTCCEEEEECCTTCBHHHHHHHTG--GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCC
T ss_pred CCCCEEEEECCCCCCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccc
Confidence 999999999999999999997643 3488999999999999999999999 9999999999999998887
Q ss_pred -eEEecccccccccCCCCcccccccccCccccccccc-CCCCCccchHHHHHHHHHHHhCCC-CCcchhhhhhhhhhhhh
Q 002069 845 -AHVSDFGISKFLKLGLSNRTELAGTFGYIAPELAYT-MKVTEKCDVYSFGVLALEVIKGKH-PRDFISSICSSLSSNLN 921 (973)
Q Consensus 845 -~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~-p~~~~~~~~~~~~~~~~ 921 (973)
+|++|||.+..... .....|++.|+|||++.+ ..++.++||||||+++|||++|.. ||........ .
T Consensus 159 ~~kl~Dfg~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~------~ 228 (289)
T 4fvq_A 159 FIKLSDPGISITVLP----KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRK------L 228 (289)
T ss_dssp EEEECCCCSCTTTSC----HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH------H
T ss_pred eeeeccCcccccccC----ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHH------H
Confidence 99999999875532 233568899999999987 678999999999999999999554 4442221100 0
Q ss_pred hhhhhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 922 IALDEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
.... .....+... ...+.+++.+||+.||.+|||++++++.|+
T Consensus 229 ~~~~--~~~~~~~~~------~~~l~~li~~~l~~dp~~Rps~~~ll~~l~ 271 (289)
T 4fvq_A 229 QFYE--DRHQLPAPK------AAELANLINNCMDYEPDHRPSFRAIIRDLN 271 (289)
T ss_dssp HHHH--TTCCCCCCS------SCTTHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred HHhh--ccCCCCCCC------CHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 0000 111222211 123678899999999999999999999875
No 217
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=2.1e-37 Score=337.34 Aligned_cols=256 Identities=21% Similarity=0.305 Sum_probs=205.5
Q ss_pred HHhcCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCc------chhhHHHHHHHHHHhhcCC-CCceeeeceee
Q 002069 698 RATKNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPG------EMACQQEFLNEGNALTKIR-HRNIVKFYGFC 769 (973)
Q Consensus 698 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~------~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~ 769 (973)
...++|++.+.||+|+||.||+|... +++.||||++...... .....+.+.+|+.+++++. ||||+++++++
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (298)
T 1phk_A 14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY 93 (298)
T ss_dssp -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence 34578999999999999999999664 7899999998754321 1223567889999999995 99999999999
Q ss_pred eccceeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEec
Q 002069 770 SHALHSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSD 849 (973)
Q Consensus 770 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~D 849 (973)
......++||||+++++|.++++.. ..+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+||+|
T Consensus 94 ~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~d 167 (298)
T 1phk_A 94 ETNTFFFLVFDLMKKGELFDYLTEK---VTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTD 167 (298)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECC
T ss_pred ccCCeEEEEEeccCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEec
Confidence 9999999999999999999999653 3689999999999999999999999 999999999999999999999999
Q ss_pred ccccccccCCCCcccccccccCcccccccc------cCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhh
Q 002069 850 FGISKFLKLGLSNRTELAGTFGYIAPELAY------TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIA 923 (973)
Q Consensus 850 fg~a~~~~~~~~~~~~~~g~~~y~aPE~~~------~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~ 923 (973)
||.+...... .......|++.|+|||++. ...++.++||||||+++|||++|+.||....... .
T Consensus 168 fg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~---------~ 237 (298)
T 1phk_A 168 FGFSCQLDPG-EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML---------M 237 (298)
T ss_dssp CTTCEECCTT-CCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---------H
T ss_pred ccchhhcCCC-cccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHH---------H
Confidence 9999876543 2334567899999999875 4567889999999999999999999997433211 1
Q ss_pred hhhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 002069 924 LDEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQ 969 (973)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 969 (973)
...................+..+.+++.+||+.||.+|||++++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 238 LRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp HHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred HHHHhcCCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 1111111111111111233456889999999999999999999986
No 218
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=4.8e-37 Score=332.91 Aligned_cols=250 Identities=21% Similarity=0.321 Sum_probs=199.3
Q ss_pred cCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeec----ccee
Q 002069 701 KNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSH----ALHS 775 (973)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~ 775 (973)
..|.+.+.||+|+||+||+|.. .++..||+|++...... ....+.+.+|+.++++++||||+++++++.. ....
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 104 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT-KSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCI 104 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhC-HHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceE
Confidence 4588889999999999999955 57889999998754332 3346789999999999999999999998864 3568
Q ss_pred EEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCC--eEeecCCCCCeeec-CCCceEEecccc
Q 002069 776 FVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPP--IVHRDISSKNVLLN-LEYEAHVSDFGI 852 (973)
Q Consensus 776 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~--i~H~Dlk~~Nill~-~~~~~kl~Dfg~ 852 (973)
++||||+++++|.++++.. ..+++..++.++.|++.|++|||+. + ++||||||+||+++ .++.+||+|||.
T Consensus 105 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~ 178 (290)
T 1t4h_A 105 VLVTELMTSGTLKTYLKRF---KVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGL 178 (290)
T ss_dssp EEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTG
T ss_pred EEEEEecCCCCHHHHHHHc---cCCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCC
Confidence 9999999999999999653 3588999999999999999999998 7 99999999999997 789999999999
Q ss_pred cccccCCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCC
Q 002069 853 SKFLKLGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRL 932 (973)
Q Consensus 853 a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 932 (973)
+...... ......|++.|+|||++.+ .++.++||||+|+++|+|++|+.||......... .........
T Consensus 179 ~~~~~~~--~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~--------~~~~~~~~~ 247 (290)
T 1t4h_A 179 ATLKRAS--FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQI--------YRRVTSGVK 247 (290)
T ss_dssp GGGCCTT--SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHH--------HHHHTTTCC
T ss_pred ccccccc--ccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHH--------HHHHhccCC
Confidence 9755433 3344679999999998764 5899999999999999999999999743322111 111111111
Q ss_pred CCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 933 PTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 933 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
+.... ......+.+++.+||+.||.+|||++|+++.
T Consensus 248 ~~~~~--~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 248 PASFD--KVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp CGGGG--GCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccccC--CCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 11111 1122357899999999999999999999874
No 219
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.6e-37 Score=367.77 Aligned_cols=251 Identities=24% Similarity=0.317 Sum_probs=197.6
Q ss_pred CCcccc-cccCCCceeEEEEEcC---CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEE
Q 002069 702 NFDDEH-CIGNGGQGSVYKAELP---TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFV 777 (973)
Q Consensus 702 ~~~~~~-~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 777 (973)
++.+.+ .||+|+||.||+|.+. ++..||||+++..... ...++|.+|+.++++++|||||++++++.. +..++
T Consensus 336 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~l 412 (613)
T 2ozo_A 336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEK--ADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALML 412 (613)
T ss_dssp SEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSS--TTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEE
T ss_pred ceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCCh--HHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEE
Confidence 344444 7999999999999653 5567999999865322 336889999999999999999999999976 46899
Q ss_pred EEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEeccccccccc
Q 002069 778 VYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLK 857 (973)
Q Consensus 778 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 857 (973)
||||+++|+|.+++... ...+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 413 v~E~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~ 487 (613)
T 2ozo_A 413 VMEMAGGGPLHKFLVGK--REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALG 487 (613)
T ss_dssp EEECCTTCBHHHHHTTC--TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC
T ss_pred EEEeCCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCccccc
Confidence 99999999999999654 34689999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCc---ccccccccCcccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcchhhhhhhhhhhhhhhhhhhcCCCCC
Q 002069 858 LGLSN---RTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSICSSLSSNLNIALDEMLDPRLP 933 (973)
Q Consensus 858 ~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 933 (973)
..... .....+++.|+|||++.+..++.++|||||||++|||++ |+.||....... ....+........+
T Consensus 488 ~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~------~~~~i~~~~~~~~p 561 (613)
T 2ozo_A 488 ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE------VMAFIEQGKRMECP 561 (613)
T ss_dssp --------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH------HHHHHHTTCCCCCC
T ss_pred CCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH------HHHHHHcCCCCCCC
Confidence 43221 122345689999999998999999999999999999998 999997543210 01111111111111
Q ss_pred CCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 934 TPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 934 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
. ..+..+.+++.+||+.||++||++++|++.|+
T Consensus 562 ~------~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~ 594 (613)
T 2ozo_A 562 P------ECPPELYALMSDCWIYKWEDRPDFLTVEQRMR 594 (613)
T ss_dssp T------TCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHH
T ss_pred C------cCCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 1 23345789999999999999999999999875
No 220
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=3.6e-37 Score=343.60 Aligned_cols=263 Identities=24% Similarity=0.312 Sum_probs=199.4
Q ss_pred hcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeec-------
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSH------- 771 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------- 771 (973)
..+|++.+.||+|+||+||+|.. .+|+.||||++....... .....+.+|+.++++++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 94 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKE-GFPITALREIKILQLLKHENVVNLIEICRTKASPYNR 94 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSS-SSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccc-cchHHHHHHHHHHHhccCCCcccHhheeecccccccc
Confidence 46899999999999999999965 589999999987553322 224678899999999999999999999876
Q ss_pred -cceeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecc
Q 002069 772 -ALHSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDF 850 (973)
Q Consensus 772 -~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Df 850 (973)
.+..++||||+++ ++.+.+.... ..+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.+||+||
T Consensus 95 ~~~~~~lv~e~~~~-~l~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Df 168 (351)
T 3mi9_A 95 CKGSIYLVFDFCEH-DLAGLLSNVL--VKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADF 168 (351)
T ss_dssp --CEEEEEEECCSE-EHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred CCceEEEEEeccCC-CHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccc
Confidence 3468999999985 7777775443 3589999999999999999999999 9999999999999999999999999
Q ss_pred cccccccCCC----CcccccccccCccccccccc-CCCCCccchHHHHHHHHHHHhCCCCCcchhhhhh--hhhh----h
Q 002069 851 GISKFLKLGL----SNRTELAGTFGYIAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSICS--SLSS----N 919 (973)
Q Consensus 851 g~a~~~~~~~----~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~--~~~~----~ 919 (973)
|.++.+.... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||........ .... .
T Consensus 169 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~ 248 (351)
T 3mi9_A 169 GLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSI 248 (351)
T ss_dssp TTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCC
T ss_pred hhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Confidence 9998765321 22344678999999999876 4579999999999999999999999975432110 0000 0
Q ss_pred hhhh--------hhhhcCCCCCCCchhhHH------HHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 920 LNIA--------LDEMLDPRLPTPLRNVQD------KLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 920 ~~~~--------~~~~~~~~~~~~~~~~~~------~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
.... ..+.... .......... ....+.+++.+||+.||++|||++|+++.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 249 TPEVWPNVDNYELYEKLEL-VKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp CTTTSTTGGGCGGGTSSCC-CSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred Chhhccccccchhhccccc-ccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 0000 0000000 0000000111 12457899999999999999999999874
No 221
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=3.5e-37 Score=333.00 Aligned_cols=245 Identities=22% Similarity=0.370 Sum_probs=202.7
Q ss_pred HhcCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeec------
Q 002069 699 ATKNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSH------ 771 (973)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------ 771 (973)
...+|++.+.||+|+||.||+|... +++.||+|++.... +.+.+|++++++++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPE 81 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC--
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcc
Confidence 4567999999999999999999765 89999999987532 346689999999999999999998854
Q ss_pred ----------cceeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecC
Q 002069 772 ----------ALHSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNL 841 (973)
Q Consensus 772 ----------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~ 841 (973)
....++||||+++++|.++++... ...+++..++.++.|++.|++|||+. +|+||||||+||+++.
T Consensus 82 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~ 157 (284)
T 2a19_B 82 TSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR-GEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVD 157 (284)
T ss_dssp -------CCEEEEEEEEECCCCSCBHHHHHHHGG-GSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEE
T ss_pred cccccccccCcceEEEEEeccCCCCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcC
Confidence 445799999999999999997543 34689999999999999999999999 9999999999999999
Q ss_pred CCceEEecccccccccCCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhh
Q 002069 842 EYEAHVSDFGISKFLKLGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLN 921 (973)
Q Consensus 842 ~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~ 921 (973)
++.+||+|||.++...... ......|++.|+|||.+.+..++.++||||||+++|||++|..|+.......
T Consensus 158 ~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~-------- 228 (284)
T 2a19_B 158 TKQVKIGDFGLVTSLKNDG-KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFF-------- 228 (284)
T ss_dssp TTEEEECCCTTCEESSCCS-CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHHH--------
T ss_pred CCCEEECcchhheeccccc-cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHHHH--------
Confidence 9999999999998775542 3344579999999999999999999999999999999999999975322111
Q ss_pred hhhhhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 922 IALDEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
.......++... +..+.+++.+||+.||.+|||+.|+++.|+
T Consensus 229 ---~~~~~~~~~~~~------~~~~~~li~~~l~~dp~~Rps~~e~l~~l~ 270 (284)
T 2a19_B 229 ---TDLRDGIISDIF------DKKEKTLLQKLLSKKPEDRPNTSEILRTLT 270 (284)
T ss_dssp ---HHHHTTCCCTTS------CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ---HHhhcccccccC------CHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 111112222211 234678999999999999999999999875
No 222
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=8.7e-38 Score=339.08 Aligned_cols=256 Identities=25% Similarity=0.374 Sum_probs=194.6
Q ss_pred hcCCcccccccCCCceeEEEEEcC--CCC--EEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeecccee
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELP--TGE--IVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHS 775 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~--~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 775 (973)
.++|++.+.||+|+||+||+|.+. +++ .||||+++..........+.+.+|+.++++++||||+++++++..+. .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 367999999999999999999642 333 69999987654444455688999999999999999999999998765 7
Q ss_pred EEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEeccccccc
Q 002069 776 FVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKF 855 (973)
Q Consensus 776 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~ 855 (973)
++||||+++++|.+++.... ..+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||.++.
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 170 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQ--GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRA 170 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHG--GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred eeeEecccCCCHHHHHHhcc--CCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEcccccccc
Confidence 89999999999999997542 4588999999999999999999999 999999999999999999999999999987
Q ss_pred ccCCCC---cccccccccCcccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcchhhhhhhhhhhhhhhhhhhcCCC
Q 002069 856 LKLGLS---NRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSICSSLSSNLNIALDEMLDPR 931 (973)
Q Consensus 856 ~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (973)
...... ......+++.|+|||++.+..++.++||||||+++|||++ |+.||...... ..........
T Consensus 171 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~---------~~~~~~~~~~ 241 (291)
T 1u46_A 171 LPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS---------QILHKIDKEG 241 (291)
T ss_dssp CCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH---------HHHHHHHTSC
T ss_pred ccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH---------HHHHHHHccC
Confidence 754432 1223457888999999988889999999999999999999 99999743321 1111111111
Q ss_pred CCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 932 LPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 932 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
..... ....+..+.+++.+||+.||.+|||++++++.|+
T Consensus 242 ~~~~~--~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 280 (291)
T 1u46_A 242 ERLPR--PEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLL 280 (291)
T ss_dssp CCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCC--CcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHH
Confidence 10000 0122345789999999999999999999999874
No 223
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=3.5e-37 Score=352.71 Aligned_cols=200 Identities=24% Similarity=0.322 Sum_probs=168.8
Q ss_pred hcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeecc-----c
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHA-----L 773 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~ 773 (973)
.++|++.+.||+|+||.||+|.. .+++.||||++..... .....+.+.+|+.++++++||||+++++++... .
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 103 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFE-DLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFD 103 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTT-SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhc-ChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCC
Confidence 46899999999999999999955 5788999999976433 334467899999999999999999999999765 5
Q ss_pred eeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEeccccc
Q 002069 774 HSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGIS 853 (973)
Q Consensus 774 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a 853 (973)
..|+||||++ ++|.++++.. ..+++.+++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+|
T Consensus 104 ~~~lv~e~~~-~~L~~~~~~~---~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla 176 (432)
T 3n9x_A 104 ELYIVLEIAD-SDLKKLFKTP---IFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLA 176 (432)
T ss_dssp CEEEEEECCS-EEHHHHHHSS---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEecCC-cCHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCc
Confidence 6899999987 6999999754 3589999999999999999999999 9999999999999999999999999999
Q ss_pred ccccCCCC----------------------cccccccccCccccccc-ccCCCCCccchHHHHHHHHHHHhCCCCCc
Q 002069 854 KFLKLGLS----------------------NRTELAGTFGYIAPELA-YTMKVTEKCDVYSFGVLALEVIKGKHPRD 907 (973)
Q Consensus 854 ~~~~~~~~----------------------~~~~~~g~~~y~aPE~~-~~~~~~~~~Dv~slG~~l~el~tg~~p~~ 907 (973)
+....... ......||+.|+|||++ .+..++.++||||+||++|||++|..||.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 177 RTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp EEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 87654321 13557899999999986 56679999999999999999998666554
No 224
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.4e-37 Score=333.47 Aligned_cols=253 Identities=24% Similarity=0.334 Sum_probs=199.5
Q ss_pred cCCcccccccCCCceeEEEEEcC-CC---CEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeecccee-
Q 002069 701 KNFDDEHCIGNGGQGSVYKAELP-TG---EIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHS- 775 (973)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~-~~---~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~- 775 (973)
..|...+.||+|+||+||+|.+. ++ ..||+|++.... .....+.+.+|+.++++++||||+++++++.+.+..
T Consensus 21 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 98 (298)
T 3pls_A 21 VVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRIT--EMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLP 98 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCC--SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCC
T ss_pred eEEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccc--cHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCc
Confidence 35667799999999999999642 22 379999987543 334467899999999999999999999999766554
Q ss_pred EEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEeccccccc
Q 002069 776 FVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKF 855 (973)
Q Consensus 776 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~ 855 (973)
++||||+.+++|.+++.... ..+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||.++.
T Consensus 99 ~~v~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 173 (298)
T 3pls_A 99 HVLLPYMCHGDLLQFIRSPQ--RNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARD 173 (298)
T ss_dssp EEEECCCTTCBHHHHHHCTT--CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCT
T ss_pred EEEEecccCCCHHHHHhccc--cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCccc
Confidence 99999999999999997643 4678999999999999999999999 999999999999999999999999999986
Q ss_pred ccCCC----CcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCC-cchhhhhhhhhhhhhhhhhhhcCC
Q 002069 856 LKLGL----SNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPR-DFISSICSSLSSNLNIALDEMLDP 930 (973)
Q Consensus 856 ~~~~~----~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~-~~~~~~~~~~~~~~~~~~~~~~~~ 930 (973)
..... .......+++.|+|||.+.+..++.++||||||+++|+|++|..|+ ...... . ...........
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~-~-----~~~~~~~~~~~ 247 (298)
T 3pls_A 174 ILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPF-D-----LTHFLAQGRRL 247 (298)
T ss_dssp TTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGG-G-----HHHHHHTTCCC
T ss_pred ccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHH-H-----HHHHhhcCCCC
Confidence 64321 2233456789999999999999999999999999999999965554 322110 0 01111111111
Q ss_pred CCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 931 RLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 931 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
..+.. .+..+.+++.+||+.||.+|||++++++.|+
T Consensus 248 ~~~~~------~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~ 283 (298)
T 3pls_A 248 PQPEY------CPDSLYQVMQQCWEADPAVRPTFRVLVGEVE 283 (298)
T ss_dssp CCCTT------CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCcc------chHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 11111 2235788999999999999999999999875
No 225
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=9.3e-38 Score=340.80 Aligned_cols=253 Identities=23% Similarity=0.352 Sum_probs=198.4
Q ss_pred hcCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVV 778 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 778 (973)
.++|++.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|+.++++++||||+++++++..++..++|
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 94 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSE---EELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIM 94 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEE
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCH---HHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEE
Confidence 478999999999999999999665 689999999875432 2357889999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccC
Q 002069 779 YEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKL 858 (973)
Q Consensus 779 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 858 (973)
|||+++++|.+++.... ..+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+.....
T Consensus 95 ~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 169 (302)
T 2j7t_A 95 IEFCPGGAVDAIMLELD--RGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLK 169 (302)
T ss_dssp EECCTTEEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHH
T ss_pred EEeCCCCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCccccc
Confidence 99999999999986432 4589999999999999999999999 999999999999999999999999999764432
Q ss_pred CCCcccccccccCccccccc-----ccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCC
Q 002069 859 GLSNRTELAGTFGYIAPELA-----YTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLP 933 (973)
Q Consensus 859 ~~~~~~~~~g~~~y~aPE~~-----~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 933 (973)
.........|++.|+|||++ .+..++.++||||||+++|+|++|+.||......... .. ......+...
T Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-----~~-~~~~~~~~~~ 243 (302)
T 2j7t_A 170 TLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVL-----LK-IAKSDPPTLL 243 (302)
T ss_dssp HHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH-----HH-HHHSCCCCCS
T ss_pred cccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHH-----HH-HhccCCcccC
Confidence 22223445789999999988 3667889999999999999999999999744321100 00 0011111111
Q ss_pred CCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 934 TPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 934 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
. ....+..+.+++.+||+.||.+|||++++++.
T Consensus 244 ~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 244 T----PSKWSVEFRDFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp S----GGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred C----ccccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 1 11223457889999999999999999999863
No 226
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=3.7e-37 Score=345.24 Aligned_cols=247 Identities=17% Similarity=0.129 Sum_probs=198.7
Q ss_pred hcCCcccccccCCCceeEEEEE------cCCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCC---CCceeeeceeee
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAE------LPTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIR---HRNIVKFYGFCS 770 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~------~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~ 770 (973)
.++|.+.+.||+|+||+||+|. ..+++.||||++.... ..++..|+.++++++ |+||+++++++.
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~------~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~ 137 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN------PWEFYIGTQLMERLKPSMQHMFMKFYSAHL 137 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC------HHHHHHHHHHHHHSCGGGGGGBCCEEEEEE
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC------hhHHHHHHHHHHHhhhhhhhhhhhhheeee
Confidence 4679999999999999999993 4578899999997531 356778888888876 999999999999
Q ss_pred ccceeEEEEEecCCCChHHHhccCc--cccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecC-------
Q 002069 771 HALHSFVVYEYLEMGSLAMILSNDA--AAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNL------- 841 (973)
Q Consensus 771 ~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~------- 841 (973)
.++..++||||+++|+|.++++... ....+++.+++.++.||+.||+|||+. +|+||||||+||+++.
T Consensus 138 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~ 214 (365)
T 3e7e_A 138 FQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDD 214 (365)
T ss_dssp CSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC--
T ss_pred cCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCccc
Confidence 9999999999999999999996432 235689999999999999999999999 9999999999999998
Q ss_pred ----CCceEEecccccccccC--CCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhh
Q 002069 842 ----EYEAHVSDFGISKFLKL--GLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSS 915 (973)
Q Consensus 842 ----~~~~kl~Dfg~a~~~~~--~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~ 915 (973)
++.+||+|||+|+.+.. .........||+.|+|||++.+..++.++|||||||++|||+||+.||.......
T Consensus 215 ~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-- 292 (365)
T 3e7e_A 215 EDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE-- 292 (365)
T ss_dssp ----CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE--
T ss_pred cccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc--
Confidence 89999999999976542 2233455679999999999999999999999999999999999999986332100
Q ss_pred hhhhhhhhhhhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCC-CCHHHHHHHhc
Q 002069 916 LSSNLNIALDEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSR-PTMQKVSQLLK 972 (973)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R-Ps~~ev~~~L~ 972 (973)
.. ....+.... ....+.+++..|++.+|.+| |+++++.+.|+
T Consensus 293 ------~~----~~~~~~~~~-----~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~ 335 (365)
T 3e7e_A 293 ------CK----PEGLFRRLP-----HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLK 335 (365)
T ss_dssp ------EE----ECSCCTTCS-----SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHH
T ss_pred ------ee----echhccccC-----cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHH
Confidence 00 111111111 12346678889999999998 56777776553
No 227
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=2.5e-37 Score=339.90 Aligned_cols=257 Identities=20% Similarity=0.308 Sum_probs=200.7
Q ss_pred hcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeee----ccce
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCS----HALH 774 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~----~~~~ 774 (973)
.++|++.+.||+|+||.||+|.. .+++.||||++... .....+.+.+|+.+++.++||||+++++++. ....
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH---EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHE 104 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES---SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC---CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCce
Confidence 46899999999999999999965 58999999998643 2344678999999999999999999999986 3457
Q ss_pred eEEEEEecCCCChHHHhccCc-cccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEeccccc
Q 002069 775 SFVVYEYLEMGSLAMILSNDA-AAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGIS 853 (973)
Q Consensus 775 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a 853 (973)
.++||||+++++|.+++.... ....+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.+|++|||.+
T Consensus 105 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~ 181 (317)
T 2buj_A 105 AWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSM 181 (317)
T ss_dssp EEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSC
T ss_pred eEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcc
Confidence 899999999999999996532 234689999999999999999999999 9999999999999999999999999998
Q ss_pred ccccCCCCc---------ccccccccCcccccccccCC---CCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhh
Q 002069 854 KFLKLGLSN---------RTELAGTFGYIAPELAYTMK---VTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLN 921 (973)
Q Consensus 854 ~~~~~~~~~---------~~~~~g~~~y~aPE~~~~~~---~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~ 921 (973)
......... .....||+.|+|||++.+.. ++.++||||||+++|||++|+.||+......... .
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~----~ 257 (317)
T 2buj_A 182 NQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSV----A 257 (317)
T ss_dssp EESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCH----H
T ss_pred hhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchh----h
Confidence 765422111 12345799999999987554 6889999999999999999999996432111111 1
Q ss_pred hhhhhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 922 IALDEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
...... ...+.. ...+..+.+++.+||+.||.+|||++++++.|+
T Consensus 258 ~~~~~~--~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~ 302 (317)
T 2buj_A 258 LAVQNQ--LSIPQS----PRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLE 302 (317)
T ss_dssp HHHHCC----CCCC----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHhhcc--CCCCcc----ccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhh
Confidence 111111 111111 112345789999999999999999999999875
No 228
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=3.9e-37 Score=335.31 Aligned_cols=264 Identities=23% Similarity=0.324 Sum_probs=202.7
Q ss_pred cCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEEE
Q 002069 701 KNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVVY 779 (973)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 779 (973)
++|++.+.||+|+||.||+|... +|+.||||++...... ......+.+|+.++++++||||+++++++..++..++||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET-EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVF 81 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC---------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccc-hhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEE
Confidence 57999999999999999999664 7899999998754322 122467889999999999999999999999999999999
Q ss_pred EecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccCC
Q 002069 780 EYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKLG 859 (973)
Q Consensus 780 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 859 (973)
||++ ++|.+++..... ..+++..++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+......
T Consensus 82 e~~~-~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 156 (299)
T 2r3i_A 82 EFLH-QDLKKFMDASAL-TGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156 (299)
T ss_dssp ECCS-EEHHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCC
T ss_pred Eccc-CCHHHHHHhhhc-cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCC
Confidence 9998 699999875432 3578999999999999999999999 9999999999999999999999999999877654
Q ss_pred CCcccccccccCcccccccccCC-CCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhh--hhh----hhh---hh--hh
Q 002069 860 LSNRTELAGTFGYIAPELAYTMK-VTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLS--SNL----NIA---LD--EM 927 (973)
Q Consensus 860 ~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~--~~~----~~~---~~--~~ 927 (973)
........+++.|+|||.+.+.. ++.++||||||+++|+|++|+.||........... ... ... .. ..
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (299)
T 2r3i_A 157 VRTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 236 (299)
T ss_dssp SBCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred ccccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCcc
Confidence 44445567899999999988765 78999999999999999999999975442211000 000 000 00 00
Q ss_pred cCCCCCCC----c-hhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 928 LDPRLPTP----L-RNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 928 ~~~~~~~~----~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
..+.++.. . .........+.+++.+|++.||++|||++++++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~h 284 (299)
T 2r3i_A 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 284 (299)
T ss_dssp CCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 01111110 0 0001123567899999999999999999999873
No 229
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.1e-37 Score=339.33 Aligned_cols=258 Identities=16% Similarity=0.223 Sum_probs=197.5
Q ss_pred HhcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceee-eccceeE
Q 002069 699 ATKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFC-SHALHSF 776 (973)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~-~~~~~~~ 776 (973)
..++|++.+.||+|+||+||+|.. .+++.||||++..... ...+.+|+.+++.++|++++..++++ ...+..+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNV 81 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC--------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc-----chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceE
Confidence 457899999999999999999964 5889999998764322 24577899999999888877776665 5667889
Q ss_pred EEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeee---cCCCceEEeccccc
Q 002069 777 VVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLL---NLEYEAHVSDFGIS 853 (973)
Q Consensus 777 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill---~~~~~~kl~Dfg~a 853 (973)
+||||+ +++|.+++.... ..+++.+++.++.|++.|++|||+. +|+||||||+||++ +.++.+||+|||.+
T Consensus 82 lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a 155 (296)
T 4hgt_A 82 MVMELL-GPSLEDLFNFCS--RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155 (296)
T ss_dssp EEEECC-CCBHHHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTC
T ss_pred EEEEcc-CCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccc
Confidence 999999 899999997433 3589999999999999999999999 99999999999999 78899999999999
Q ss_pred ccccCCCC-------cccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhh
Q 002069 854 KFLKLGLS-------NRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDE 926 (973)
Q Consensus 854 ~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 926 (973)
+....... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||......... .........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~--~~~~~~~~~ 233 (296)
T 4hgt_A 156 KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKR--QKYERISEK 233 (296)
T ss_dssp EECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSS--SHHHHHHHH
T ss_pred eeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhh--hhhhhhhcc
Confidence 87755422 223567999999999999999999999999999999999999999753311000 000000000
Q ss_pred hcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 927 MLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 927 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
...... .......+..+.+++.+||+.||++|||++++++.|+
T Consensus 234 ~~~~~~---~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (296)
T 4hgt_A 234 KMSTPI---EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFR 276 (296)
T ss_dssp HHHSCH---HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHH
T ss_pred cccchh---hhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHH
Confidence 000000 0000112345789999999999999999999999874
No 230
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=7e-37 Score=343.32 Aligned_cols=260 Identities=20% Similarity=0.275 Sum_probs=193.8
Q ss_pred hcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccc-----
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHAL----- 773 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----- 773 (973)
.++|++.+.||+|+||.||+|.. .+++.||||++..... .....+.+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 102 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 102 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTS-SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccC-ChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccc
Confidence 36899999999999999999954 5789999999976433 2344678899999999999999999999987654
Q ss_pred -eeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccc
Q 002069 774 -HSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGI 852 (973)
Q Consensus 774 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~ 852 (973)
..++||||++ +++.+++. ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.
T Consensus 103 ~~~~lv~e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 173 (371)
T 2xrw_A 103 QDVYIVMELMD-ANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 173 (371)
T ss_dssp CEEEEEEECCS-EEHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred cceEEEEEcCC-CCHHHHHh-----hccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeec
Confidence 6799999998 47888775 2478999999999999999999999 999999999999999999999999999
Q ss_pred cccccCCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhh--h-----------h
Q 002069 853 SKFLKLGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLS--S-----------N 919 (973)
Q Consensus 853 a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~--~-----------~ 919 (973)
++..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||........... . .
T Consensus 174 a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 252 (371)
T 2xrw_A 174 ARTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKK 252 (371)
T ss_dssp -----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTT
T ss_pred ccccccc-cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHH
Confidence 9876543 223446799999999999999999999999999999999999999975432111000 0 0
Q ss_pred hhhhhhhhc--CCC--------------CCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 920 LNIALDEML--DPR--------------LPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 920 ~~~~~~~~~--~~~--------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
......... .+. .+............+.+++.+||+.||.+|||++|+++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 253 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp SCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred hhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 000000000 000 011111122335678899999999999999999999864
No 231
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=1.7e-37 Score=347.65 Aligned_cols=260 Identities=22% Similarity=0.313 Sum_probs=203.6
Q ss_pred hcCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVV 778 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 778 (973)
.++|++.+.||+|+||+||+|... +++.||+|++.... .....+.+.+|+.++++++||||+++++++.+++..++|
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 109 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 109 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC--CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc--CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEE
Confidence 367999999999999999999654 78999999997653 234467899999999999999999999999999999999
Q ss_pred EEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccC
Q 002069 779 YEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKL 858 (973)
Q Consensus 779 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 858 (973)
|||+++++|.++++.. ..+++..+..++.|++.|++|||+.. +|+||||||+||+++.++.+||+|||.++....
T Consensus 110 ~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 184 (360)
T 3eqc_A 110 MEHMDGGSLDQVLKKA---GRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 184 (360)
T ss_dssp ECCCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH
T ss_pred EECCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCccccc
Confidence 9999999999999653 35889999999999999999999842 799999999999999999999999999976543
Q ss_pred CCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhh--hhhh------------------
Q 002069 859 GLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICS--SLSS------------------ 918 (973)
Q Consensus 859 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~--~~~~------------------ 918 (973)
. ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ....
T Consensus 185 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (360)
T 3eqc_A 185 S--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGR 262 (360)
T ss_dssp H--C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC-------------------
T ss_pred c--cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCC
Confidence 2 23345799999999999999999999999999999999999999974331100 0000
Q ss_pred -------------hhhhhhhhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 919 -------------NLNIALDEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 919 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
..............+.... ...+..+.+++.+||+.||.+|||++|+++.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 325 (360)
T 3eqc_A 263 PLNKFGMDSRPPMAIFELLDYIVNEPPPKLPS--GVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325 (360)
T ss_dssp -----------CCCHHHHHHHHHHSCCCCCCT--TTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cccccccCCCCcccchhhhhHHhccCCCCCCc--ccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 0000000011111000000 1123457899999999999999999999864
No 232
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1.7e-37 Score=348.72 Aligned_cols=256 Identities=9% Similarity=0.003 Sum_probs=184.3
Q ss_pred hcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHH---HhhcCCCCceeeec-------ee
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGN---ALTKIRHRNIVKFY-------GF 768 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~---~l~~l~h~niv~~~-------~~ 768 (973)
..+|++.+.||+|+||+||+|.+ .+++.||||++...........+.+.+|+. .++. +||||++++ ++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~ 139 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDA 139 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehh
Confidence 35699999999999999999975 488999999998765545555677888854 5555 799988754 34
Q ss_pred eecc-----------------ceeEEEEEecCCCChHHHhccCccccCCCHHHH------HHHHHHHHHHHHHHhhCCCC
Q 002069 769 CSHA-----------------LHSFVVYEYLEMGSLAMILSNDAAAEEFGWTKR------MNAIKGVADALLYMHTNCFP 825 (973)
Q Consensus 769 ~~~~-----------------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~------~~i~~~i~~~l~~LH~~~~~ 825 (973)
+..+ ...++||||++ ++|.++++... ..+.+..+ +.++.||+.|++|||++
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~--- 213 (371)
T 3q60_A 140 VAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD--FVYVFRGDEGILALHILTAQLIRLAANLQSK--- 213 (371)
T ss_dssp EEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH--HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---
T ss_pred eecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc--cccchhhhhhhhhHHHHHHHHHHHHHHHHHC---
Confidence 3322 34799999999 89999997543 23345555 78889999999999999
Q ss_pred CeEeecCCCCCeeecCCCceEEecccccccccCCCCcccccccccCccccccccc--CCCCCccchHHHHHHHHHHHhCC
Q 002069 826 PIVHRDISSKNVLLNLEYEAHVSDFGISKFLKLGLSNRTELAGTFGYIAPELAYT--MKVTEKCDVYSFGVLALEVIKGK 903 (973)
Q Consensus 826 ~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~tg~ 903 (973)
+|+||||||+||+++.++.+||+|||+++..... .....+++.|+|||++.+ ..++.++|||||||++|||++|+
T Consensus 214 ~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~ 290 (371)
T 3q60_A 214 GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR---GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLF 290 (371)
T ss_dssp TEEETTCSGGGEEECTTSCEEECCGGGEEETTCE---EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSS
T ss_pred CCccCcCCHHHEEECCCCCEEEEecceeeecCCC---ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999866422 224567799999999987 67999999999999999999999
Q ss_pred CCCcchhhhhhhhhhhhhhhhhhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 002069 904 HPRDFISSICSSLSSNLNIALDEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQ 969 (973)
Q Consensus 904 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 969 (973)
.||............ ............. .......+..+.+++.+||+.||++|||++++++
T Consensus 291 ~Pf~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 291 LPFGLVTPGIKGSWK--RPSLRVPGTDSLA--FGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp CSTTBCCTTCTTCCC--BCCTTSCCCCSCC--CTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCCCCcCcccccchh--hhhhhhccccccc--hhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 999754321100000 0000000011111 1111123446788999999999999999999976
No 233
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=7.6e-38 Score=348.96 Aligned_cols=257 Identities=16% Similarity=0.186 Sum_probs=199.0
Q ss_pred cCCcccccccCCCceeEEEEEcC---------CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceee-------
Q 002069 701 KNFDDEHCIGNGGQGSVYKAELP---------TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVK------- 764 (973)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~---------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~------- 764 (973)
++|++.+.||+|+||.||+|... +++.||||++... +.+.+|+.++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~--------~~~~~E~~~l~~l~h~niv~~~~~~~~ 113 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD--------GRLFNEQNFFQRAAKPLQVNKWKKLYS 113 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT--------STHHHHHHHHHHHCCHHHHHHHHHHTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc--------chHHHHHHHHHHhcccchhhhhhhhcc
Confidence 68999999999999999999765 3789999998643 45778999999999999988
Q ss_pred --------eceeeec-cceeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCC
Q 002069 765 --------FYGFCSH-ALHSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSK 835 (973)
Q Consensus 765 --------~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~ 835 (973)
+++++.. ....++||||+ +++|.+++.... ...+++.+++.++.|++.|++|||++ +|+||||||+
T Consensus 114 ~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~ 188 (352)
T 2jii_A 114 TPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP-KHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAE 188 (352)
T ss_dssp CTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGG
T ss_pred CCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC-cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHH
Confidence 5666655 67889999999 999999997542 35689999999999999999999999 9999999999
Q ss_pred CeeecCCC--ceEEecccccccccCCCC-------cccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCC
Q 002069 836 NVLLNLEY--EAHVSDFGISKFLKLGLS-------NRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPR 906 (973)
Q Consensus 836 Nill~~~~--~~kl~Dfg~a~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~ 906 (973)
||+++.++ .+||+|||+++.+..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||
T Consensus 189 NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf 268 (352)
T 2jii_A 189 NIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPW 268 (352)
T ss_dssp GEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTT
T ss_pred HEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCc
Confidence 99999998 999999999987654321 123457999999999999989999999999999999999999999
Q ss_pred cchhhhhhhhhhhhhhhhhhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 907 DFISSICSSLSSNLNIALDEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
................. ... ...+..........+..+.+++.+||+.||.+|||++++++.|+
T Consensus 269 ~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~ 332 (352)
T 2jii_A 269 TNCLPNTEDIMKQKQKF-VDK-PGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLE 332 (352)
T ss_dssp GGGTTCHHHHHHHHHHH-HHS-CCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHH
T ss_pred ccCCcCHHHHHHHHHhc-cCC-hhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHH
Confidence 85431111111110000 000 01111100000112345788999999999999999999999875
No 234
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=2.5e-37 Score=340.47 Aligned_cols=256 Identities=24% Similarity=0.262 Sum_probs=197.1
Q ss_pred HhcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCc-----chhhHHHHHHHHHHhhcCCCCceeeeceeeecc
Q 002069 699 ATKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPG-----EMACQQEFLNEGNALTKIRHRNIVKFYGFCSHA 772 (973)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 772 (973)
..++|++.+.||+|+||.||+|.. .+++.||||++...... .......+.+|+.++++++||||+++++++..+
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 346799999999999999999965 47899999998754321 112235688999999999999999999998766
Q ss_pred ceeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCc---eEEec
Q 002069 773 LHSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYE---AHVSD 849 (973)
Q Consensus 773 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~---~kl~D 849 (973)
. .++||||+++++|.+++... ..+++.+++.++.|++.|++|||++ +|+||||||+||+++.++. +||+|
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~D 160 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVVGN---KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITD 160 (322)
T ss_dssp S-EEEEEECCTTEETHHHHSTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECC
T ss_pred c-eEEEEecCCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEcc
Confidence 4 89999999999999998654 3688999999999999999999999 9999999999999987654 99999
Q ss_pred ccccccccCCCCcccccccccCcccccccc---cCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhh
Q 002069 850 FGISKFLKLGLSNRTELAGTFGYIAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDE 926 (973)
Q Consensus 850 fg~a~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 926 (973)
||.++..... .......||+.|+|||++. ...++.++|||||||++|+|++|+.||........ .....
T Consensus 161 fg~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-----~~~~~-- 232 (322)
T 2ycf_A 161 FGHSKILGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS-----LKDQI-- 232 (322)
T ss_dssp CTTCEECCCC-HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSC-----HHHHH--
T ss_pred Cccceecccc-cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHH-----HHHHH--
Confidence 9999876543 2223456899999999874 56688999999999999999999999974321100 00001
Q ss_pred hcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 927 MLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 927 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
...............+..+.+++.+||+.||.+|||++++++.
T Consensus 233 -~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h 275 (322)
T 2ycf_A 233 -TSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 275 (322)
T ss_dssp -HHTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred -HhCccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence 1111111111112234567899999999999999999999863
No 235
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.7e-37 Score=340.73 Aligned_cols=261 Identities=26% Similarity=0.405 Sum_probs=204.8
Q ss_pred hcCCcccccccCCCceeEEEEEc-----CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccc-
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL-----PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHAL- 773 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~- 773 (973)
.++|++.+.||+|+||.||+|++ .+++.||||++... .....+.+.+|+.++++++||||+++++++...+
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 116 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR 116 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC---CSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC---
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCC
Confidence 46799999999999999999973 47889999999754 2334578999999999999999999999986543
Q ss_pred -eeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccc
Q 002069 774 -HSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGI 852 (973)
Q Consensus 774 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~ 852 (973)
..++||||+++++|.+++.... ..+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.
T Consensus 117 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~ 191 (326)
T 2w1i_A 117 RNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGL 191 (326)
T ss_dssp -CCEEEECCCTTCBHHHHHHHST--TSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTT
T ss_pred CceEEEEECCCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcc
Confidence 6899999999999999997543 3588999999999999999999999 999999999999999999999999999
Q ss_pred cccccCCCCc---ccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhh-hhhhhh-----hhhhh
Q 002069 853 SKFLKLGLSN---RTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSI-CSSLSS-----NLNIA 923 (973)
Q Consensus 853 a~~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~-~~~~~~-----~~~~~ 923 (973)
++........ .....++..|+|||.+.+..++.++||||||+++|||+||..||...... ...... .....
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (326)
T 2w1i_A 192 TKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 271 (326)
T ss_dssp CEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHH
T ss_pred hhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHH
Confidence 9877554321 22345677899999999888999999999999999999999998643211 110000 00001
Q ss_pred hhhhcC-C-CCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 924 LDEMLD-P-RLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 924 ~~~~~~-~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
..+.+. . ..+.. ...+..+.+++.+||+.||.+|||+.++++.|+
T Consensus 272 ~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~ 318 (326)
T 2w1i_A 272 LIELLKNNGRLPRP----DGCPDEIYMIMTECWNNNVNQRPSFRDLALRVD 318 (326)
T ss_dssp HHHHHHTTCCCCCC----TTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred HHHHhhcCCCCCCC----CcccHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 111111 1 11111 122345788999999999999999999999875
No 236
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1.9e-37 Score=338.55 Aligned_cols=261 Identities=26% Similarity=0.381 Sum_probs=186.0
Q ss_pred HhcCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEE
Q 002069 699 ATKNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFV 777 (973)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~l 777 (973)
..++|++.+.||+|+||.||+|... +++.||||++...... ...+++.+|+.++++++||||+++++++...+..++
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 90 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQ--TSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWL 90 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC------------------CCCCCCCTTBCCEEEEEESSSCEEE
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcc--hhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEE
Confidence 3578999999999999999999754 7899999998754322 235678899999999999999999999999999999
Q ss_pred EEEecCCCChHHHhccC-----ccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccc
Q 002069 778 VYEYLEMGSLAMILSND-----AAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGI 852 (973)
Q Consensus 778 v~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~ 852 (973)
||||+++++|.+++... .....+++..++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||.
T Consensus 91 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~ 167 (303)
T 2vwi_A 91 VMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGV 167 (303)
T ss_dssp EEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHH
T ss_pred EehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccc
Confidence 99999999999998641 1234589999999999999999999999 999999999999999999999999999
Q ss_pred cccccCCCC-----cccccccccCccccccccc-CCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhh
Q 002069 853 SKFLKLGLS-----NRTELAGTFGYIAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDE 926 (973)
Q Consensus 853 a~~~~~~~~-----~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 926 (973)
+........ ......||+.|+|||.+.+ ..++.++||||||+++|||++|+.||........... ....
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~-----~~~~ 242 (303)
T 2vwi_A 168 SAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLML-----TLQN 242 (303)
T ss_dssp HHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHH-----HHTS
T ss_pred hheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHH-----Hhcc
Confidence 976654321 1234578999999999875 5689999999999999999999999975432111000 0000
Q ss_pred hcCCCCCCC---chhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 927 MLDPRLPTP---LRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 927 ~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
. .+..... ..........+.+++.+||+.||.+|||++++++.
T Consensus 243 ~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 243 D-PPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp S-CCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred C-CCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 0 0000000 00001123457889999999999999999999873
No 237
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=2.5e-37 Score=336.32 Aligned_cols=257 Identities=16% Similarity=0.227 Sum_probs=200.6
Q ss_pred hcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceee-eccceeEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFC-SHALHSFV 777 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~-~~~~~~~l 777 (973)
.++|++.+.||+|+||.||+|.. .+++.||||++..... .+.+.+|+.+++.++|++++..+.++ ...+..++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~l 82 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVM 82 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS-----CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc-----hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEE
Confidence 46899999999999999999965 5899999999865432 24688999999999988877666655 56677899
Q ss_pred EEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeee---cCCCceEEecccccc
Q 002069 778 VYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLL---NLEYEAHVSDFGISK 854 (973)
Q Consensus 778 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill---~~~~~~kl~Dfg~a~ 854 (973)
||||+ +++|.+++.... ..+++.+++.++.|++.|++|||++ +|+||||||+||++ +.++.+||+|||.++
T Consensus 83 v~e~~-~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~ 156 (296)
T 3uzp_A 83 VMELL-GPSLEDLFNFCS--RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156 (296)
T ss_dssp EEECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCE
T ss_pred EEEec-CCCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCcc
Confidence 99999 899999996433 4689999999999999999999999 99999999999999 478999999999998
Q ss_pred cccCCCC-------cccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhh
Q 002069 855 FLKLGLS-------NRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEM 927 (973)
Q Consensus 855 ~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 927 (973)
....... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||........ ...........
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~~~~~~~~~ 234 (296)
T 3uzp_A 157 KYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATK--RQKYERISEKK 234 (296)
T ss_dssp ECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSS--SSHHHHHHHHH
T ss_pred cccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhh--hhhhhhhcccc
Confidence 7765432 12456799999999999999999999999999999999999999975321100 00000000000
Q ss_pred cCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 928 LDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
...... ......+..+.+++.+||+.||.+|||++++++.|+
T Consensus 235 ~~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~ 276 (296)
T 3uzp_A 235 MSTPIE---VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFR 276 (296)
T ss_dssp HHSCHH---HHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHH
T ss_pred cCCchH---HHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHH
Confidence 000000 000112345789999999999999999999999875
No 238
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=4e-37 Score=332.91 Aligned_cols=255 Identities=25% Similarity=0.315 Sum_probs=204.4
Q ss_pred HHhcCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeE
Q 002069 698 RATKNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSF 776 (973)
Q Consensus 698 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 776 (973)
...++|++.+.||+|+||.||+|... +++.||||++...... ....+.+.+|+.++++++||||+++++++.+.+..+
T Consensus 19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 97 (287)
T 2wei_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK-NKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFY 97 (287)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBS-SSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccc-hHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEE
Confidence 44678999999999999999999664 7899999998654322 223578999999999999999999999999999999
Q ss_pred EEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCC---CceEEeccccc
Q 002069 777 VVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLE---YEAHVSDFGIS 853 (973)
Q Consensus 777 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~---~~~kl~Dfg~a 853 (973)
+||||+++++|.+++... ..+++.+++.++.|++.|++|||+. +++||||||+||+++.+ +.+||+|||.+
T Consensus 98 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~ 171 (287)
T 2wei_A 98 IVGELYTGGELFDEIIKR---KRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLS 171 (287)
T ss_dssp EEECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGG
T ss_pred EEEEccCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcc
Confidence 999999999999988643 3589999999999999999999999 99999999999999754 47999999999
Q ss_pred ccccCCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCC
Q 002069 854 KFLKLGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLP 933 (973)
Q Consensus 854 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 933 (973)
....... ......|++.|+|||.+.+. ++.++||||||+++|+|++|+.||...... ............
T Consensus 172 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---------~~~~~~~~~~~~ 240 (287)
T 2wei_A 172 TCFQQNT-KMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEY---------DILKRVETGKYA 240 (287)
T ss_dssp GTBCCCS-SCSCHHHHHTTCCHHHHTTC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---------HHHHHHHHCCCC
T ss_pred eeecCCC-ccccccCcccccChHHhcCC-CCCchhhHhHHHHHHHHHhCCCCCCCCCHH---------HHHHHHHcCCCC
Confidence 8765432 23345689999999988764 889999999999999999999999743321 111111111221
Q ss_pred CCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 934 TPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 934 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
.........+..+.+++.+||+.||.+|||++++++.
T Consensus 241 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 241 FDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp CCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred CCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 1111122234467899999999999999999999873
No 239
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=1.3e-36 Score=336.20 Aligned_cols=255 Identities=18% Similarity=0.224 Sum_probs=198.6
Q ss_pred hcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCC-CCceeeeceeeec--ccee
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIR-HRNIVKFYGFCSH--ALHS 775 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~--~~~~ 775 (973)
.++|++.+.||+|+||+||+|.. .+++.||||++... ..+.+.+|+.++++++ ||||+++++++.+ ....
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~ 108 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV------KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTP 108 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC------CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc------chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCce
Confidence 36799999999999999999954 58999999998742 1467889999999997 9999999999987 5678
Q ss_pred EEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCC-ceEEecccccc
Q 002069 776 FVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEY-EAHVSDFGISK 854 (973)
Q Consensus 776 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~-~~kl~Dfg~a~ 854 (973)
++||||+++++|.++++ .+++.++..++.|++.|++|||+. +|+||||||+||+++.++ .+||+|||.++
T Consensus 109 ~lv~e~~~~~~l~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~ 179 (330)
T 3nsz_A 109 ALVFEHVNNTDFKQLYQ------TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 179 (330)
T ss_dssp EEEEECCCCCCHHHHGG------GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEEEeccCchhHHHHHH------hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCce
Confidence 99999999999999874 378899999999999999999999 999999999999999776 89999999998
Q ss_pred cccCCCCcccccccccCccccccccc-CCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhh-------hh-hhhh---
Q 002069 855 FLKLGLSNRTELAGTFGYIAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSL-------SS-NLNI--- 922 (973)
Q Consensus 855 ~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~-------~~-~~~~--- 922 (973)
...... ......|++.|+|||++.+ ..++.++||||+||++|||++|+.||.......... .. ....
T Consensus 180 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 258 (330)
T 3nsz_A 180 FYHPGQ-EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 258 (330)
T ss_dssp ECCTTC-CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHH
T ss_pred EcCCCC-ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHH
Confidence 765542 3345678999999999877 668999999999999999999999994321110000 00 0000
Q ss_pred --------hhhhhcCCCCCCCch------hhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 923 --------ALDEMLDPRLPTPLR------NVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 923 --------~~~~~~~~~~~~~~~------~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
.............+. ........+.+++.+||+.||++|||++|+++.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 259 KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp HTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred HhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 000000000000000 011124567899999999999999999999874
No 240
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=2.1e-37 Score=345.33 Aligned_cols=256 Identities=19% Similarity=0.294 Sum_probs=203.7
Q ss_pred hcCCcccccccCCCceeEEEEEcCCCCEEEEEEcCCCCCcch--------------hhHHHHHHHHHHhhcCCCCceeee
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELPTGEIVAVKKFHSPLPGEM--------------ACQQEFLNEGNALTKIRHRNIVKF 765 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~--------------~~~~~~~~e~~~l~~l~h~niv~~ 765 (973)
.++|++.+.||+|+||.||+|.. +++.||||++........ ...+.+.+|+.++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46899999999999999999988 999999999864321111 112789999999999999999999
Q ss_pred ceeeeccceeEEEEEecCCCChHHH------hccCccccCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEeecCCCCCee
Q 002069 766 YGFCSHALHSFVVYEYLEMGSLAMI------LSNDAAAEEFGWTKRMNAIKGVADALLYMHT-NCFPPIVHRDISSKNVL 838 (973)
Q Consensus 766 ~~~~~~~~~~~lv~e~~~~~~L~~~------l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~-~~~~~i~H~Dlk~~Nil 838 (973)
++++.+++..++||||+++++|.++ +.... ...+++..++.++.|++.|++|||+ . +++||||||+||+
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil 184 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNY-TCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNIL 184 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSS-CCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhcc-ccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEE
Confidence 9999999999999999999999998 54321 3568999999999999999999999 7 9999999999999
Q ss_pred ecCCCceEEecccccccccCCCCcccccccccCcccccccccC-CCCC-ccchHHHHHHHHHHHhCCCCCcchhhhhhhh
Q 002069 839 LNLEYEAHVSDFGISKFLKLGLSNRTELAGTFGYIAPELAYTM-KVTE-KCDVYSFGVLALEVIKGKHPRDFISSICSSL 916 (973)
Q Consensus 839 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~-~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~ 916 (973)
++.++.+||+|||.+...... ......|++.|+|||.+.+. .++. ++||||||+++|||++|+.||.........
T Consensus 185 ~~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~- 261 (348)
T 2pml_X 185 MDKNGRVKLSDFGESEYMVDK--KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVEL- 261 (348)
T ss_dssp ECTTSCEEECCCTTCEECBTT--EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHH-
T ss_pred EcCCCcEEEeccccccccccc--cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHH-
Confidence 999999999999999876543 33456799999999999877 5666 999999999999999999999754321110
Q ss_pred hhhhhhhhhhhcCCCCCCC---------------chhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 917 SSNLNIALDEMLDPRLPTP---------------LRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
...........+ .......+..+.+++.+||+.||.+|||++|+++.
T Consensus 262 -------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 262 -------FNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp -------HHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred -------HHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 111111111000 00002234567899999999999999999999873
No 241
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=4.7e-37 Score=343.09 Aligned_cols=259 Identities=20% Similarity=0.256 Sum_probs=183.9
Q ss_pred hcCCcccccccCCCceeEEEEE-cCCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeecc------
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAE-LPTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHA------ 772 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------ 772 (973)
.++|++.+.||+|+||.||+|. ..+|+.||||++..... .....+.+.+|+.+++.++||||+++++++...
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 106 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 106 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTS-SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCcccc-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccC
Confidence 4689999999999999999995 45899999999976533 233467888999999999999999999998653
Q ss_pred ceeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccc
Q 002069 773 LHSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGI 852 (973)
Q Consensus 773 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~ 852 (973)
...++||||+ +++|.++++. ..+++.++..++.||+.|++|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 107 ~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~ 178 (367)
T 2fst_X 107 NDVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGL 178 (367)
T ss_dssp CCCEEEEECC-CEECC---------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC---
T ss_pred CeEEEEeccc-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeeccc
Confidence 5679999999 6899988864 3589999999999999999999999 999999999999999999999999999
Q ss_pred cccccCCCCcccccccccCccccccccc-CCCCCccchHHHHHHHHHHHhCCCCCcchhhhhh------hhhhhhhhh--
Q 002069 853 SKFLKLGLSNRTELAGTFGYIAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSICS------SLSSNLNIA-- 923 (973)
Q Consensus 853 a~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~------~~~~~~~~~-- 923 (973)
++..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||........ ..+......
T Consensus 179 a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~ 255 (367)
T 2fst_X 179 ARHTADE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLK 255 (367)
T ss_dssp ---------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHT
T ss_pred ccccccc---CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 9865432 344678999999999877 6789999999999999999999999975442110 000000000
Q ss_pred ------hhh---hcCCCCCCCch-hhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 924 ------LDE---MLDPRLPTPLR-NVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 924 ------~~~---~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
... .+.......+. ........+.+++.+||+.||.+|||++|+++.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 256 KISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp TCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 000 00000001110 001123457899999999999999999999864
No 242
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=3.2e-37 Score=334.46 Aligned_cols=255 Identities=23% Similarity=0.363 Sum_probs=187.0
Q ss_pred hcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVV 778 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 778 (973)
.++|++.+.||+|+||+||+|.. .+++.||||++...... ....+.+.++...++.++||||+++++++.+++..++|
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 84 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS-QEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 84 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CH-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCc-HHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence 46899999999999999999965 58899999999765332 22234455555668888999999999999999999999
Q ss_pred EEecCCCChHHHhccCc-cccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEeccccccccc
Q 002069 779 YEYLEMGSLAMILSNDA-AAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLK 857 (973)
Q Consensus 779 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 857 (973)
|||++ +++.++++... ....+++..++.++.|++.|++|||++. +++||||||+||+++.++.+||+|||.++...
T Consensus 85 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 85 MELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp EECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred Eehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 99998 58888775422 2346899999999999999999999953 89999999999999999999999999998765
Q ss_pred CCCCcccccccccCccccccc----ccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCC
Q 002069 858 LGLSNRTELAGTFGYIAPELA----YTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLP 933 (973)
Q Consensus 858 ~~~~~~~~~~g~~~y~aPE~~----~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 933 (973)
.. .......||+.|+|||++ .+..++.++||||+|+++|||++|+.||+.......... ...... .+..+
T Consensus 162 ~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~----~~~~~~-~~~~~ 235 (290)
T 3fme_A 162 DD-VAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLK----QVVEEP-SPQLP 235 (290)
T ss_dssp ---------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHH----HHHHSC-CCCCC
T ss_pred cc-ccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHH----HHhccC-CCCcc
Confidence 43 223345799999999996 556788999999999999999999999974322111111 111111 11111
Q ss_pred CCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 002069 934 TPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQ 969 (973)
Q Consensus 934 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 969 (973)
. ...+..+.+++.+||+.||++|||++|+++
T Consensus 236 ~-----~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 236 A-----DKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp T-----TTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred c-----ccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 1 112345788999999999999999999986
No 243
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=5.7e-37 Score=343.64 Aligned_cols=272 Identities=19% Similarity=0.232 Sum_probs=200.2
Q ss_pred cHHHHHHHhcCCcccccccCCCceeEEEEEcCCCCEEEEEEcCCCCCc--------chhhHHHHHHHHHHhhcCCCCcee
Q 002069 692 VHEEIIRATKNFDDEHCIGNGGQGSVYKAELPTGEIVAVKKFHSPLPG--------EMACQQEFLNEGNALTKIRHRNIV 763 (973)
Q Consensus 692 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~~~~e~~~l~~l~h~niv 763 (973)
...++....++|++.+.||+|+||.||+|...+|+.||||++...... .....+.+.+|+.++++++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 456677788999999999999999999998888999999998643222 122347899999999999999999
Q ss_pred eeceeeec-----cceeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCee
Q 002069 764 KFYGFCSH-----ALHSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVL 838 (973)
Q Consensus 764 ~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nil 838 (973)
++++++.. ....++||||++ |++.+++.... ..+++..++.++.|++.|++|||+. +|+||||||+||+
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl 166 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQR--IVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNIL 166 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEE
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEE
Confidence 99999843 346799999998 68888886443 4689999999999999999999999 9999999999999
Q ss_pred ecCCCceEEecccccccccCCCCcccccccccCccccccccc-CCCCCccchHHHHHHHHHHHhCCCCCcchhhhhh--h
Q 002069 839 LNLEYEAHVSDFGISKFLKLGLSNRTELAGTFGYIAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSICS--S 915 (973)
Q Consensus 839 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~--~ 915 (973)
++.++.+||+|||.++..... .......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||........ .
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~ 245 (362)
T 3pg1_A 167 LADNNDITICDFNLAREDTAD-ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNK 245 (362)
T ss_dssp ECTTCCEEECCTTC----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred EcCCCCEEEEecCcccccccc-cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 999999999999999755433 23344678999999999876 6789999999999999999999999975331100 0
Q ss_pred h----hhh--------hhhhhhhhcCCCC---C-CCc-hhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 916 L----SSN--------LNIALDEMLDPRL---P-TPL-RNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 916 ~----~~~--------~~~~~~~~~~~~~---~-~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
. ... ............. + ..+ .........+.+++.+||+.||.+|||++|+++.
T Consensus 246 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 246 IVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 0 000 0000011111111 1 000 0011223457899999999999999999999864
No 244
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.6e-37 Score=339.18 Aligned_cols=254 Identities=26% Similarity=0.397 Sum_probs=196.1
Q ss_pred HHhcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcC-CCCceeeeceeeec----
Q 002069 698 RATKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKI-RHRNIVKFYGFCSH---- 771 (973)
Q Consensus 698 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~---- 771 (973)
...++|++.+.||+|+||.||+|.. .+++.||||++...... .+.+.+|+.+++++ +||||+++++++..
T Consensus 21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~----~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~ 96 (326)
T 2x7f_A 21 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE----EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP 96 (326)
T ss_dssp CCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSST----THHHHHHHHHHHHHCCSTTBCCEEEEEEECC--
T ss_pred CCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCccc----HHHHHHHHHHHHhccCCCCeeeeeeEEeeccCc
Confidence 3467899999999999999999965 58899999998754222 46788999999998 89999999999976
Q ss_pred --cceeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEec
Q 002069 772 --ALHSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSD 849 (973)
Q Consensus 772 --~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~D 849 (973)
....++||||+++++|.+++.... ...+++..++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~D 172 (326)
T 2x7f_A 97 GMDDQLWLVMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVD 172 (326)
T ss_dssp CCCCEEEEEEECCTTEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECC
T ss_pred cccceEEEEEEcCCCCcHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEee
Confidence 457899999999999999997543 34689999999999999999999999 999999999999999999999999
Q ss_pred ccccccccCCCCcccccccccCcccccccc-----cCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhh
Q 002069 850 FGISKFLKLGLSNRTELAGTFGYIAPELAY-----TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIAL 924 (973)
Q Consensus 850 fg~a~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~ 924 (973)
||.+..............|++.|+|||++. +..++.++|||||||++|+|++|+.||.......... ..
T Consensus 173 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~------~~ 246 (326)
T 2x7f_A 173 FGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALF------LI 246 (326)
T ss_dssp CTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH------HH
T ss_pred CcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHH------Hh
Confidence 999987654433445567999999999987 5668899999999999999999999997443211100 01
Q ss_pred hhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 925 DEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
.....+.... . ..+..+.+++.+||+.||.+||+++++++.
T Consensus 247 ~~~~~~~~~~--~---~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 247 PRNPAPRLKS--K---KWSKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp HHSCCCCCSC--S---CSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred hcCccccCCc--c---ccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 1111111111 1 112357889999999999999999999873
No 245
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=6.8e-37 Score=339.67 Aligned_cols=251 Identities=20% Similarity=0.270 Sum_probs=185.0
Q ss_pred hcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCC-CCceeeeceeee-------
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIR-HRNIVKFYGFCS------- 770 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~------- 770 (973)
..+|++.+.||+|+||.||+|.. .+++.||||++... .....+.+.+|+.+++++. ||||+++++++.
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 103 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN---EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESD 103 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES---SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTST
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC---chHHHHHHHHHHHHHHHhccCCChhhccccccccccccc
Confidence 35799999999999999999965 48899999998543 2334578899999999996 999999999983
Q ss_pred -ccceeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCC--eEeecCCCCCeeecCCCceEE
Q 002069 771 -HALHSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPP--IVHRDISSKNVLLNLEYEAHV 847 (973)
Q Consensus 771 -~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~--i~H~Dlk~~Nill~~~~~~kl 847 (973)
.....++||||++ |+|.+++........+++.+++.++.|++.|++|||+. + |+||||||+||+++.++.+||
T Consensus 104 ~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl 179 (337)
T 3ll6_A 104 TGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKL 179 (337)
T ss_dssp TSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEB
T ss_pred cCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEE
Confidence 3445799999996 79999987644445799999999999999999999998 7 999999999999999999999
Q ss_pred ecccccccccCCCCc------------ccccccccCccccccc---ccCCCCCccchHHHHHHHHHHHhCCCCCcchhhh
Q 002069 848 SDFGISKFLKLGLSN------------RTELAGTFGYIAPELA---YTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSI 912 (973)
Q Consensus 848 ~Dfg~a~~~~~~~~~------------~~~~~g~~~y~aPE~~---~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~ 912 (973)
+|||.++........ .....||+.|+|||++ .+..++.++|||||||++|||++|+.||......
T Consensus 180 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~ 259 (337)
T 3ll6_A 180 CDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL 259 (337)
T ss_dssp CCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC------
T ss_pred ecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH
Confidence 999999876543211 1134589999999998 5667889999999999999999999999743221
Q ss_pred hhhhhhhhhhhhhhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 913 CSSLSSNLNIALDEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
.............. ....+.+++.+||+.||.+|||++|+++.|+
T Consensus 260 ---------~~~~~~~~~~~~~~------~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 304 (337)
T 3ll6_A 260 ---------RIVNGKYSIPPHDT------QYTVFHSLIRAMLQVNPEERLSIAEVVHQLQ 304 (337)
T ss_dssp ---------------CCCCTTCC------SSGGGHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred ---------HhhcCcccCCcccc------cchHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 01111111111111 1123678899999999999999999999875
No 246
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=4.9e-37 Score=366.14 Aligned_cols=246 Identities=26% Similarity=0.384 Sum_probs=195.4
Q ss_pred ccccCCCceeEEEEEc---CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEEEEecC
Q 002069 707 HCIGNGGQGSVYKAEL---PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVVYEYLE 783 (973)
Q Consensus 707 ~~lg~G~~g~V~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 783 (973)
+.||+|+||+||+|.+ .+++.||||+++.... .....+++.+|+.++++++|||||++++++..+ ..++||||++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~-~~~lv~E~~~ 452 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN-DPALKDELLAEANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAE 452 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGG-CGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEEEEECCT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CEEEEEEccC
Confidence 4799999999999944 2567899999975422 223468899999999999999999999999654 5789999999
Q ss_pred CCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccCCCC--
Q 002069 784 MGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKLGLS-- 861 (973)
Q Consensus 784 ~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~-- 861 (973)
+|+|.++++.. ..+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.+.....
T Consensus 453 ~g~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 526 (635)
T 4fl3_A 453 LGPLNKYLQQN---RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 526 (635)
T ss_dssp TEEHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-----
T ss_pred CCCHHHHHhhC---CCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccc
Confidence 99999999643 3589999999999999999999999 999999999999999999999999999987754422
Q ss_pred -cccccccccCcccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCCchhh
Q 002069 862 -NRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSICSSLSSNLNIALDEMLDPRLPTPLRNV 939 (973)
Q Consensus 862 -~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 939 (973)
......+|+.|+|||++.+..++.++|||||||++|||++ |+.||....... ....+........+.
T Consensus 527 ~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~------~~~~i~~~~~~~~p~----- 595 (635)
T 4fl3_A 527 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE------VTAMLEKGERMGCPA----- 595 (635)
T ss_dssp --------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH------HHHHHHTTCCCCCCT-----
T ss_pred ccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH------HHHHHHcCCCCCCCC-----
Confidence 1223456789999999999999999999999999999998 999997543210 111111111122221
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 940 QDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 940 ~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
..+..+.+++.+||+.||++||++++|++.|+
T Consensus 596 -~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~ 627 (635)
T 4fl3_A 596 -GCPREMYDLMNLCWTYDVENRPGFAAVELRLR 627 (635)
T ss_dssp -TCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred -CCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 12345789999999999999999999999875
No 247
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=1.8e-36 Score=340.09 Aligned_cols=258 Identities=21% Similarity=0.288 Sum_probs=197.3
Q ss_pred hcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeecccee---
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHS--- 775 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~--- 775 (973)
.++|.+.+.||+|+||+||+|.. .+|+.||||++...... ....+.+.+|+.+++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 119 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQS-EIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 119 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSS-HHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccc-hhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence 46899999999999999999954 57899999999765433 34467889999999999999999999999876654
Q ss_pred ---EEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccc
Q 002069 776 ---FVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGI 852 (973)
Q Consensus 776 ---~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~ 852 (973)
++||||++ ++|.+++. ..+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.
T Consensus 120 ~~~~lv~e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~ 190 (371)
T 4exu_A 120 YDFYLVMPFMQ-TDLQKIMG-----MEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGL 190 (371)
T ss_dssp CCCEEEEECCC-EEHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTC
T ss_pred eeEEEEEcccc-ccHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCc
Confidence 99999998 68888774 2488999999999999999999999 999999999999999999999999999
Q ss_pred cccccCCCCcccccccccCccccccccc-CCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhh--hhh-----------
Q 002069 853 SKFLKLGLSNRTELAGTFGYIAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSS--LSS----------- 918 (973)
Q Consensus 853 a~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~--~~~----------- 918 (973)
++..... .....||+.|+|||++.+ ..++.++||||+||++|+|++|+.||......... ...
T Consensus 191 a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 267 (371)
T 4exu_A 191 ARHADAE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQ 267 (371)
T ss_dssp C-----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHT
T ss_pred ccccccC---cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHH
Confidence 9865432 344678999999999887 67899999999999999999999999754321100 000
Q ss_pred ----hhhhhhhhhcCCCCCCCc-hhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 919 ----NLNIALDEMLDPRLPTPL-RNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 919 ----~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
.................. .........+.+++.+||+.||.+|||++|+++.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 268 KLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp TCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 000000000111111110 0011224568899999999999999999999864
No 248
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=1.4e-36 Score=340.20 Aligned_cols=261 Identities=21% Similarity=0.261 Sum_probs=200.0
Q ss_pred hcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeecc-----c
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHA-----L 773 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~ 773 (973)
..+|++.+.||+|+||.||+|.. .+++.||||++.... .....+.+.+|+.++++++||||+++++++... .
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 103 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMK 103 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTT--CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCC
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEecccc--CcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccc
Confidence 46899999999999999999965 478899999997532 233457899999999999999999999998654 3
Q ss_pred eeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEeccccc
Q 002069 774 HSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGIS 853 (973)
Q Consensus 774 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a 853 (973)
..++||||++ ++|.++++. ..+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.+
T Consensus 104 ~~~iv~e~~~-~~L~~~l~~----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a 175 (364)
T 3qyz_A 104 DVYIVQDLME-TDLYKLLKT----QHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLA 175 (364)
T ss_dssp CEEEEEECCS-EEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEcccC-cCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcce
Confidence 6799999998 589998864 3588999999999999999999999 9999999999999999999999999999
Q ss_pred ccccCCCC---cccccccccCccccccccc-CCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhh------hhhhhhhh
Q 002069 854 KFLKLGLS---NRTELAGTFGYIAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSS------LSSNLNIA 923 (973)
Q Consensus 854 ~~~~~~~~---~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~------~~~~~~~~ 923 (973)
+....... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||......... ........
T Consensus 176 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 255 (364)
T 3qyz_A 176 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 255 (364)
T ss_dssp EECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHH
T ss_pred EecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHH
Confidence 87654322 1244579999999998654 45899999999999999999999999754321100 00000000
Q ss_pred hh-----------hhcCCCCCCCch-hhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 924 LD-----------EMLDPRLPTPLR-NVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 924 ~~-----------~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
.. ..........+. ........+.+++.+||+.||.+|||++|+++.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 256 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp HHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00 000000000000 001123457899999999999999999999863
No 249
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=3e-37 Score=350.95 Aligned_cols=199 Identities=21% Similarity=0.329 Sum_probs=154.5
Q ss_pred cCCcc-cccccCCCceeEEEEEcC---CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeee--ccce
Q 002069 701 KNFDD-EHCIGNGGQGSVYKAELP---TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCS--HALH 774 (973)
Q Consensus 701 ~~~~~-~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~--~~~~ 774 (973)
+.|++ .++||+|+||+||+|.+. +++.||||++..... ...+.+|+.++++++||||+++++++. ....
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 94 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI-----SMSACREIALLRELKHPNVISLQKVFLSHADRK 94 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC-----CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC-----CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCe
Confidence 45666 458999999999999754 578999999975422 256789999999999999999999994 4678
Q ss_pred eEEEEEecCCCChHHHhccCc------cccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeee----cCCCc
Q 002069 775 SFVVYEYLEMGSLAMILSNDA------AAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLL----NLEYE 844 (973)
Q Consensus 775 ~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill----~~~~~ 844 (973)
.++||||++ ++|.+++.... ....+++..++.++.||+.||+|||+. +|+||||||+||++ +.++.
T Consensus 95 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~ 170 (405)
T 3rgf_A 95 VWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGR 170 (405)
T ss_dssp EEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTC
T ss_pred EEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCc
Confidence 899999997 57887775322 122489999999999999999999999 99999999999999 67789
Q ss_pred eEEecccccccccCCC---CcccccccccCcccccccccC-CCCCccchHHHHHHHHHHHhCCCCCcc
Q 002069 845 AHVSDFGISKFLKLGL---SNRTELAGTFGYIAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDF 908 (973)
Q Consensus 845 ~kl~Dfg~a~~~~~~~---~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~ 908 (973)
+||+|||+|+...... .......||+.|+|||++.+. .++.++||||+||++|||++|+.||..
T Consensus 171 ~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~ 238 (405)
T 3rgf_A 171 VKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 238 (405)
T ss_dssp EEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred EEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCC
Confidence 9999999998765432 223446789999999998874 589999999999999999999999964
No 250
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.5e-38 Score=349.86 Aligned_cols=255 Identities=22% Similarity=0.305 Sum_probs=200.4
Q ss_pred hcCCcccccccCCCceeEEEEEc----CCCCEEEEEEcCCCCC-cchhhHHHHHHHHHHhhcC-CCCceeeeceeeeccc
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL----PTGEIVAVKKFHSPLP-GEMACQQEFLNEGNALTKI-RHRNIVKFYGFCSHAL 773 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~~-~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 773 (973)
.++|++.+.||+|+||.||+|+. .+++.||||+++.... ......+.+.+|+.+++.+ +||||+++++++..+.
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 36899999999999999999976 4789999999874321 1112235577889999999 6999999999999999
Q ss_pred eeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEeccccc
Q 002069 774 HSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGIS 853 (973)
Q Consensus 774 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a 853 (973)
..++||||+++++|.+++... ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a 206 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQR---ERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLS 206 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEE
T ss_pred eEEEEeecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCC
Confidence 999999999999999999653 3588999999999999999999999 9999999999999999999999999999
Q ss_pred ccccCCC-CcccccccccCccccccccc--CCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhc--
Q 002069 854 KFLKLGL-SNRTELAGTFGYIAPELAYT--MKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEML-- 928 (973)
Q Consensus 854 ~~~~~~~-~~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~-- 928 (973)
+.+.... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ .........
T Consensus 207 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~-----~~~~~~~~~~~ 281 (355)
T 1vzo_A 207 KEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS-----QAEISRRILKS 281 (355)
T ss_dssp EECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC-----HHHHHHHHHHC
T ss_pred eecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccch-----HHHHHHHHhcc
Confidence 8664332 22334679999999999985 3478899999999999999999999974321100 011111111
Q ss_pred CCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCC-----CHHHHHHHh
Q 002069 929 DPRLPTPLRNVQDKLISIMEVSISCLDESPTSRP-----TMQKVSQLL 971 (973)
Q Consensus 929 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~ev~~~L 971 (973)
.+..+.. ....+.+++.+||+.||.+|| +++++++..
T Consensus 282 ~~~~~~~------~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 282 EPPYPQE------MSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp CCCCCTT------SCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred CCCCCcc------cCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 1122221 223467899999999999999 999998753
No 251
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=4.4e-37 Score=347.36 Aligned_cols=260 Identities=22% Similarity=0.246 Sum_probs=194.5
Q ss_pred hcCCcccccccCCCceeEEEEEcCCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccc------
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELPTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHAL------ 773 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------ 773 (973)
..+|++.+.||+|+||+||+|+...+..||+|++...... ..+|+.+++.++||||+++++++...+
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~-------~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~ 111 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF-------KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEV 111 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS-------CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch-------HHHHHHHHHhCCCCCcceEEEEEEecCCCCCce
Confidence 3579999999999999999998877777999988654222 236899999999999999999985433
Q ss_pred eeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeec-CCCceEEecccc
Q 002069 774 HSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLN-LEYEAHVSDFGI 852 (973)
Q Consensus 774 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~-~~~~~kl~Dfg~ 852 (973)
..++||||++++.+............+++..++.++.||+.|++|||+. +|+||||||+||+++ .++.+||+|||+
T Consensus 112 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~ 188 (394)
T 4e7w_A 112 FLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGS 188 (394)
T ss_dssp EEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCC
Confidence 3789999998765444333222345689999999999999999999999 999999999999999 789999999999
Q ss_pred cccccCCCCcccccccccCcccccccccC-CCCCccchHHHHHHHHHHHhCCCCCcchhhhhhh------hhhhhhh---
Q 002069 853 SKFLKLGLSNRTELAGTFGYIAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISSICSS------LSSNLNI--- 922 (973)
Q Consensus 853 a~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~------~~~~~~~--- 922 (973)
|+..... .......||+.|+|||++.+. .++.++||||+||++|||++|+.||......... .+.....
T Consensus 189 a~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~ 267 (394)
T 4e7w_A 189 AKILIAG-EPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIK 267 (394)
T ss_dssp CEECCTT-CCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHH
T ss_pred cccccCC-CCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 9876544 233456789999999998765 5899999999999999999999999754422110 0000000
Q ss_pred -hhhhhcCCCCCCC----chh--hHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 923 -ALDEMLDPRLPTP----LRN--VQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 923 -~~~~~~~~~~~~~----~~~--~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
.........++.. +.. ....+..+.+++.+||+.||.+|||+.|+++.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 268 TMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp HHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred hhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 0001111111110 000 01123467899999999999999999999864
No 252
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=1.7e-36 Score=331.26 Aligned_cols=253 Identities=20% Similarity=0.258 Sum_probs=197.2
Q ss_pred hcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcc-hhhHHHHHHHHHHhhcCCCCceeeeceee--ecccee
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGE-MACQQEFLNEGNALTKIRHRNIVKFYGFC--SHALHS 775 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~--~~~~~~ 775 (973)
.++|++.+.||+|+||.||+|.. .+++.||+|++....... ....+.+.+|+.++++++||||+++++++ .+....
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 47899999999999999999976 478999999986432111 12357899999999999999999999998 445678
Q ss_pred EEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEeccccccc
Q 002069 776 FVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKF 855 (973)
Q Consensus 776 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~ 855 (973)
++||||++++ +.+++.... ...+++.+++.++.|++.|++|||++ +++||||||+||+++.++.+|++|||.+..
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~ 158 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVP-EKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEA 158 (305)
T ss_dssp EEEEECCSEE-HHHHHHHST-TCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEehhccCC-HHHHHHhCc-ccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeeccccccc
Confidence 9999999977 777775433 34689999999999999999999999 999999999999999999999999999987
Q ss_pred ccCCC--CcccccccccCcccccccccCC--CCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCC
Q 002069 856 LKLGL--SNRTELAGTFGYIAPELAYTMK--VTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPR 931 (973)
Q Consensus 856 ~~~~~--~~~~~~~g~~~y~aPE~~~~~~--~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (973)
..... .......|++.|+|||++.+.. ++.++||||||+++|||++|+.||...... ..........
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---------~~~~~i~~~~ 229 (305)
T 2wtk_C 159 LHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIY---------KLFENIGKGS 229 (305)
T ss_dssp CCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHH---------HHHHHHHHCC
T ss_pred cCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHH---------HHHHHHhcCC
Confidence 65322 2233466899999999987644 377999999999999999999999743311 0111111111
Q ss_pred CCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 932 LPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 932 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
..... .....+.+++.+||+.||.+|||++|+++.
T Consensus 230 ~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 230 YAIPG----DCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp CCCCS----SSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred CCCCC----ccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 11111 122357789999999999999999999874
No 253
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=8.2e-37 Score=344.55 Aligned_cols=261 Identities=21% Similarity=0.209 Sum_probs=194.9
Q ss_pred HHhcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeec-----
Q 002069 698 RATKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSH----- 771 (973)
Q Consensus 698 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----- 771 (973)
...++|++.+.||+|+||+||+|.. .+|+.||||++...... ..+|+.+++.++||||+++++++..
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~-------~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 76 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY-------KNRELDIMKVLDHVNIIKLVDYFYTTGDEE 76 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS-------CCHHHHHHTTCCCTTBCCEEEEEEEC----
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch-------HHHHHHHHHHcCCCCccchhheeeecCccc
Confidence 4467899999999999999999954 68999999998754222 2369999999999999999999843
Q ss_pred ---------------------------------cceeEEEEEecCCCChHHHhccCc-cccCCCHHHHHHHHHHHHHHHH
Q 002069 772 ---------------------------------ALHSFVVYEYLEMGSLAMILSNDA-AAEEFGWTKRMNAIKGVADALL 817 (973)
Q Consensus 772 ---------------------------------~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~ 817 (973)
....++||||++ ++|.+.+.... ....+++..+..++.|++.|++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~ 155 (383)
T 3eb0_A 77 PKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVG 155 (383)
T ss_dssp ---------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence 234789999998 58777775321 2346899999999999999999
Q ss_pred HHhhCCCCCeEeecCCCCCeeec-CCCceEEecccccccccCCCCcccccccccCcccccccccC-CCCCccchHHHHHH
Q 002069 818 YMHTNCFPPIVHRDISSKNVLLN-LEYEAHVSDFGISKFLKLGLSNRTELAGTFGYIAPELAYTM-KVTEKCDVYSFGVL 895 (973)
Q Consensus 818 ~LH~~~~~~i~H~Dlk~~Nill~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~slG~~ 895 (973)
|||+. +|+||||||+||+++ .++.+||+|||.|+..... .......||+.|+|||.+.+. .++.++||||+||+
T Consensus 156 ~LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i 231 (383)
T 3eb0_A 156 FIHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPS-EPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCV 231 (383)
T ss_dssp HHHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTT-SCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHH
T ss_pred HHHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCC-CCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHH
Confidence 99999 999999999999998 6899999999999876544 233456789999999998765 48999999999999
Q ss_pred HHHHHhCCCCCcchhhhhhhh------hhhhhhhhhh-------hcCCCCC-CCchh--hHHHHHHHHHHHhcccCCCCC
Q 002069 896 ALEVIKGKHPRDFISSICSSL------SSNLNIALDE-------MLDPRLP-TPLRN--VQDKLISIMEVSISCLDESPT 959 (973)
Q Consensus 896 l~el~tg~~p~~~~~~~~~~~------~~~~~~~~~~-------~~~~~~~-~~~~~--~~~~~~~l~~li~~cl~~dP~ 959 (973)
+|||++|+.||.......... +......... ...+... ..+.. ....+..+.+++.+||+.||.
T Consensus 232 l~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 311 (383)
T 3eb0_A 232 FGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPD 311 (383)
T ss_dssp HHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGG
T ss_pred HHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChh
Confidence 999999999998544221100 0000000000 0001100 00000 011234578999999999999
Q ss_pred CCCCHHHHHHH
Q 002069 960 SRPTMQKVSQL 970 (973)
Q Consensus 960 ~RPs~~ev~~~ 970 (973)
+|||+.|+++.
T Consensus 312 ~R~t~~e~l~h 322 (383)
T 3eb0_A 312 LRINPYEAMAH 322 (383)
T ss_dssp GSCCHHHHHTS
T ss_pred hCCCHHHHhcC
Confidence 99999999863
No 254
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1e-36 Score=347.91 Aligned_cols=199 Identities=21% Similarity=0.254 Sum_probs=172.0
Q ss_pred hcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcC------CCCceeeeceeeecc
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKI------RHRNIVKFYGFCSHA 772 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l------~h~niv~~~~~~~~~ 772 (973)
..+|++.+.||+|+||+||+|.. .+++.||||++... ......+.+|+.+++.+ .|+||+++++++...
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~ 171 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE----KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFR 171 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEET
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc----cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccC
Confidence 45799999999999999999954 57899999999743 23346677788777766 577999999999999
Q ss_pred ceeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCc--eEEecc
Q 002069 773 LHSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYE--AHVSDF 850 (973)
Q Consensus 773 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~--~kl~Df 850 (973)
...++||||+. ++|.+++..... ..+++..++.++.||+.||+|||+. +|+||||||+||+++.++. +||+||
T Consensus 172 ~~~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DF 246 (429)
T 3kvw_A 172 NHICMTFELLS-MNLYELIKKNKF-QGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDF 246 (429)
T ss_dssp TEEEEEECCCC-CBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCC
T ss_pred CeEEEEEeccC-CCHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeec
Confidence 99999999996 689998875442 3589999999999999999999999 9999999999999999987 999999
Q ss_pred cccccccCCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchh
Q 002069 851 GISKFLKLGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFIS 910 (973)
Q Consensus 851 g~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~ 910 (973)
|+++.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 247 G~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~ 303 (429)
T 3kvw_A 247 GSSCYEHQ---RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED 303 (429)
T ss_dssp TTCEETTC---CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ccceecCC---cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC
Confidence 99976543 2334678999999999999999999999999999999999999997543
No 255
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=8.9e-37 Score=350.86 Aligned_cols=257 Identities=16% Similarity=0.234 Sum_probs=200.6
Q ss_pred hcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCC-CceeeeceeeeccceeEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRH-RNIVKFYGFCSHALHSFV 777 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~~~~~~~~~~~~~l 777 (973)
.++|++.+.||+|+||.||+|.. .+++.||||++...... .++..|+++++.++| ++++.+..++...+..++
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~-----~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~l 80 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH-----PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVL 80 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS-----CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc-----HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEE
Confidence 46899999999999999999964 58999999987654322 457789999999976 556666666677888899
Q ss_pred EEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeee---cCCCceEEecccccc
Q 002069 778 VYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLL---NLEYEAHVSDFGISK 854 (973)
Q Consensus 778 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill---~~~~~~kl~Dfg~a~ 854 (973)
||||+ +++|.++++... ..+++.+++.++.||+.||+|||+. +|+||||||+|||+ +.++.+||+|||+++
T Consensus 81 vme~~-g~sL~~ll~~~~--~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~ 154 (483)
T 3sv0_A 81 VMDLL-GPSLEDLFNFCS--RKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154 (483)
T ss_dssp EEECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCE
T ss_pred EEECC-CCCHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcce
Confidence 99999 899999997433 4689999999999999999999999 99999999999999 688999999999998
Q ss_pred cccCCCCc-------ccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhh
Q 002069 855 FLKLGLSN-------RTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEM 927 (973)
Q Consensus 855 ~~~~~~~~-------~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 927 (973)
.+...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...........
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~--~~~~~~i~~~~ 232 (483)
T 3sv0_A 155 KYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK--KQKYEKISEKK 232 (483)
T ss_dssp ECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSH--HHHHHHHHHHH
T ss_pred eccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhH--HHHHHHHhhcc
Confidence 77654321 2256799999999999999999999999999999999999999975332100 00000111110
Q ss_pred cCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 928 LDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
+..... ......+..+.+++..||+.||++||++++|++.|+
T Consensus 233 ~~~~~~---~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~ 274 (483)
T 3sv0_A 233 VATSIE---ALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFR 274 (483)
T ss_dssp HHSCHH---HHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHH
T ss_pred ccccHH---HHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 000000 000112346789999999999999999999999875
No 256
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=6.3e-37 Score=340.15 Aligned_cols=255 Identities=24% Similarity=0.366 Sum_probs=198.4
Q ss_pred hcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHH-hhcCCCCceeeeceeeeccceeEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNA-LTKIRHRNIVKFYGFCSHALHSFV 777 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~-l~~l~h~niv~~~~~~~~~~~~~l 777 (973)
.++|++.+.||+|+||+||+|.. .+|+.||||++....... ...++..|... ++.++||||+++++++.+++..++
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~l 127 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQ--EQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWI 127 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCH--HHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEE
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcH--HHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEE
Confidence 46799999999999999999965 589999999997654332 24555566555 778899999999999999999999
Q ss_pred EEEecCCCChHHHhccCc-cccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccc
Q 002069 778 VYEYLEMGSLAMILSNDA-AAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFL 856 (973)
Q Consensus 778 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~ 856 (973)
||||+++ +|.+++.... ....+++..++.++.||+.|++|||++. +|+||||||+||+++.++.+||+|||+++..
T Consensus 128 v~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 204 (340)
T 3an0_A 128 CMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYL 204 (340)
T ss_dssp EECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHHHHH
T ss_pred EHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCceec
Confidence 9999985 9988886422 2346899999999999999999999742 8999999999999999999999999999876
Q ss_pred cCCCCcccccccccCcccccccc----cCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCC
Q 002069 857 KLGLSNRTELAGTFGYIAPELAY----TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRL 932 (973)
Q Consensus 857 ~~~~~~~~~~~g~~~y~aPE~~~----~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 932 (973)
... .......||+.|+|||++. ...++.++|||||||++|||++|+.||+......... ..... ...+..
T Consensus 205 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~----~~~~~-~~~~~~ 278 (340)
T 3an0_A 205 VDS-VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQL----KQVVE-EPSPQL 278 (340)
T ss_dssp SCH-HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHH----HHHHH-SCCCCC
T ss_pred ccc-cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHH----HHHhc-CCCCCC
Confidence 432 2223357999999999964 3468899999999999999999999997432111111 01111 111111
Q ss_pred CCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 933 PTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 933 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
+ . ...+..+.+++.+||+.||++|||++++++.
T Consensus 279 ~--~---~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 311 (340)
T 3an0_A 279 P--A---DKFSAEFVDFTSQCLKKNSKERPTYPELMQH 311 (340)
T ss_dssp C--G---GGSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred C--c---ccCCHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 1 1 1123457899999999999999999999863
No 257
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=2.4e-36 Score=329.80 Aligned_cols=252 Identities=24% Similarity=0.381 Sum_probs=192.4
Q ss_pred HhcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeec------
Q 002069 699 ATKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSH------ 771 (973)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------ 771 (973)
..++|++.+.||+|+||.||+|.. .+++.||||++.. .....+.+.+|+.++++++||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 79 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH----TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVK 79 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEE----EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEec----cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhh
Confidence 356799999999999999999965 4899999999853 23446789999999999999999999998754
Q ss_pred -------cceeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCc
Q 002069 772 -------ALHSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYE 844 (973)
Q Consensus 772 -------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~ 844 (973)
....++||||+++++|.+++.... ..+++.+++.++.|++.|++|||++ +++||||||+||+++.++.
T Consensus 80 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~ 154 (303)
T 1zy4_A 80 PMTAVKKKSTLFIQMEYCENGTLYDLIHSEN--LNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRN 154 (303)
T ss_dssp ------CEEEEEEEEECCCSCBHHHHHHHSC--GGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSC
T ss_pred hhcccccCCceEEEEecCCCCCHHHhhhccc--cccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCC
Confidence 456799999999999999997543 3567899999999999999999999 9999999999999999999
Q ss_pred eEEecccccccccCCC--------------CcccccccccCcccccccccC-CCCCccchHHHHHHHHHHHhCCCCCcch
Q 002069 845 AHVSDFGISKFLKLGL--------------SNRTELAGTFGYIAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFI 909 (973)
Q Consensus 845 ~kl~Dfg~a~~~~~~~--------------~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~ 909 (973)
+|++|||.++...... .......|++.|+|||++.+. .++.++||||+||++|||++ ||...
T Consensus 155 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~ 231 (303)
T 1zy4_A 155 VKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTG 231 (303)
T ss_dssp EEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSH
T ss_pred EEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCc
Confidence 9999999998664321 122345689999999998764 68999999999999999998 54321
Q ss_pred hhhhhhhhhhhhhhhhhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 910 SSICSSLSSNLNIALDEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
....... ..... ....++.... ...+..+.+++.+||+.||.+|||++++++.
T Consensus 232 ~~~~~~~-----~~~~~-~~~~~~~~~~--~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 232 MERVNIL-----KKLRS-VSIEFPPDFD--DNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp HHHHHHH-----HHHHS-TTCCCCTTCC--TTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred hhHHHHH-----Hhccc-cccccCcccc--ccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 1111000 01111 1111121111 1223457789999999999999999999874
No 258
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=1.5e-36 Score=340.20 Aligned_cols=267 Identities=22% Similarity=0.199 Sum_probs=188.2
Q ss_pred HHHHHHhcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeecc
Q 002069 694 EEIIRATKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHA 772 (973)
Q Consensus 694 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 772 (973)
++.....++|++.+.||+|+||+||+|.. .+++.||||++...... ...+.+++..++.++||||+++++++...
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~~~l~~l~h~niv~~~~~~~~~ 91 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF----RNRELQIMQDLAVLHHPNIVQLQSYFYTL 91 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTC----CCHHHHHHHHHHHHCCTTBCCEEEEEEEE
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccc----cHHHHHHHHHHHhcCCCCcccHHHhhhcc
Confidence 45556778999999999999999999966 47899999998654322 24556777788888999999999998653
Q ss_pred ce-------eEEEEEecCCCChHHHhcc-CccccCCCHHHHHHHHHHHHHHHHHHh--hCCCCCeEeecCCCCCeeecC-
Q 002069 773 LH-------SFVVYEYLEMGSLAMILSN-DAAAEEFGWTKRMNAIKGVADALLYMH--TNCFPPIVHRDISSKNVLLNL- 841 (973)
Q Consensus 773 ~~-------~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~i~~~i~~~l~~LH--~~~~~~i~H~Dlk~~Nill~~- 841 (973)
+. .++||||+++ ++.+.+.. ......+++..+..++.|++.|++||| +. +|+||||||+||+++.
T Consensus 92 ~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~ 167 (360)
T 3e3p_A 92 GERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEA 167 (360)
T ss_dssp CSSCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETT
T ss_pred ccccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCC
Confidence 33 7899999986 44443322 222346789999999999999999999 87 9999999999999997
Q ss_pred CCceEEecccccccccCCCCcccccccccCcccccccccCC-CCCccchHHHHHHHHHHHhCCCCCcchhhhhhh-----
Q 002069 842 EYEAHVSDFGISKFLKLGLSNRTELAGTFGYIAPELAYTMK-VTEKCDVYSFGVLALEVIKGKHPRDFISSICSS----- 915 (973)
Q Consensus 842 ~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~----- 915 (973)
++.+||+|||.++..... .......||+.|+|||++.+.. ++.++|||||||++|||++|+.||.........
T Consensus 168 ~~~~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~ 246 (360)
T 3e3p_A 168 DGTLKLCDFGSAKKLSPS-EPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVR 246 (360)
T ss_dssp TTEEEECCCTTCBCCCTT-SCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred CCcEEEeeCCCceecCCC-CCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHH
Confidence 899999999999877544 2334567899999999986654 899999999999999999999999754321100
Q ss_pred -hhhhhhhhhhhhcCCCC---------CCCchh-----hHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 916 -LSSNLNIALDEMLDPRL---------PTPLRN-----VQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 916 -~~~~~~~~~~~~~~~~~---------~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
............ .+.. ...+.. .......+.+++.+||+.||.+|||++|+++.
T Consensus 247 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 247 VLGCPSREVLRKL-NPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp HHCCCCHHHHHHH-CTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HcCCCCHHHHHhc-ccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 000000001000 0000 000000 00134568899999999999999999999864
No 259
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=6e-37 Score=337.24 Aligned_cols=254 Identities=20% Similarity=0.311 Sum_probs=197.6
Q ss_pred HhcCCcccccccCCCceeEEEEEcCCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEE
Q 002069 699 ATKNFDDEHCIGNGGQGSVYKAELPTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVV 778 (973)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 778 (973)
..++|++.+.||+|+||.||+|.... .||+|+++...... ...+.+.+|+.++++++||||+++++++.+++..++|
T Consensus 31 ~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv 107 (319)
T 2y4i_B 31 PFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNE-DQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAII 107 (319)
T ss_dssp CCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCC-CCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEE
T ss_pred CHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCH-HHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEE
Confidence 35789999999999999999998743 49999987543222 2235677899999999999999999999999999999
Q ss_pred EEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccC
Q 002069 779 YEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKL 858 (973)
Q Consensus 779 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 858 (973)
|||+++++|.+++.... ..+++.+++.++.|++.|++|||+. +++||||||+||+++ ++.+||+|||+++....
T Consensus 108 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~ 181 (319)
T 2y4i_B 108 TSLCKGRTLYSVVRDAK--IVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISGV 181 (319)
T ss_dssp CBCCCSEEHHHHTTSSC--CCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC----
T ss_pred eecccCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCcccccc
Confidence 99999999999997543 4588999999999999999999999 999999999999998 68999999999876532
Q ss_pred C-----CCcccccccccCccccccccc---------CCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhh
Q 002069 859 G-----LSNRTELAGTFGYIAPELAYT---------MKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIAL 924 (973)
Q Consensus 859 ~-----~~~~~~~~g~~~y~aPE~~~~---------~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~ 924 (973)
. ........|++.|+|||++.+ ..++.++||||||+++|||++|+.||........ ....
T Consensus 182 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~------~~~~ 255 (319)
T 2y4i_B 182 LQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAI------IWQM 255 (319)
T ss_dssp ------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHH------HHHH
T ss_pred ccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH------HHHh
Confidence 1 122334568999999999864 3478899999999999999999999974432110 0111
Q ss_pred hhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 925 DEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
.....+..... ..+..+.+++.+||+.||.+|||++++++.|+
T Consensus 256 ~~~~~~~~~~~-----~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~ 298 (319)
T 2y4i_B 256 GTGMKPNLSQI-----GMGKEISDILLFCWAFEQEERPTFTKLMDMLE 298 (319)
T ss_dssp HTTCCCCCCCS-----SCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHT
T ss_pred ccCCCCCCCcC-----CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 11111211111 11234778999999999999999999999885
No 260
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=1.7e-36 Score=334.74 Aligned_cols=265 Identities=20% Similarity=0.285 Sum_probs=198.5
Q ss_pred HhcCCcccccccCCCceeEEEEEc--CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcC---CCCceeeeceeee---
Q 002069 699 ATKNFDDEHCIGNGGQGSVYKAEL--PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKI---RHRNIVKFYGFCS--- 770 (973)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~--- 770 (973)
+.++|++.+.||+|+||.||+|.. .+++.||||++....... .....+.+|+.+++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE-GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTT-SCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccc-cCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 457899999999999999999976 468899999986432211 1123455666666555 8999999999986
Q ss_pred --ccceeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEe
Q 002069 771 --HALHSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVS 848 (973)
Q Consensus 771 --~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~ 848 (973)
.....++||||++ ++|.+++.... ...+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.+||+
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~ 162 (326)
T 1blx_A 88 TDRETKLTLVFEHVD-QDLTTYLDKVP-EPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLA 162 (326)
T ss_dssp CSSEEEEEEEEECCS-CBHHHHHHHSC-TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred cCCCceEEEEEecCC-CCHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEe
Confidence 5567899999998 69999987544 23489999999999999999999999 99999999999999999999999
Q ss_pred cccccccccCCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhh--hhhh----hhh
Q 002069 849 DFGISKFLKLGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSS--LSSN----LNI 922 (973)
Q Consensus 849 Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~--~~~~----~~~ 922 (973)
|||.++..... .......|++.|+|||++.+..++.++||||||+++|||++|+.||......... .... ...
T Consensus 163 Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 241 (326)
T 1blx_A 163 DFGLARIYSFQ-MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEE 241 (326)
T ss_dssp SCCSCCCCCGG-GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGG
T ss_pred cCcccccccCC-CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcc
Confidence 99999866533 2334567899999999999989999999999999999999999999754321110 0000 000
Q ss_pred hh-------hhhcCC-CCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 923 AL-------DEMLDP-RLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 923 ~~-------~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
.. ...... ...............+.+++.+||+.||.+|||++|+++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 242 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp GSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00 000000 0000000011223457789999999999999999999863
No 261
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=4.2e-36 Score=342.10 Aligned_cols=258 Identities=26% Similarity=0.311 Sum_probs=192.4
Q ss_pred cCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeecc------c
Q 002069 701 KNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHA------L 773 (973)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~ 773 (973)
.+|++.+.||+|+||+||+|... +|+.||||++..... .+.+|++++++++||||+++++++... .
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~-------~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~ 126 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 126 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT-------SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch-------hHHHHHHHHHHcCCCCccceeeEEeccCCCCcce
Confidence 46999999999999999999664 799999999865322 223699999999999999999988432 2
Q ss_pred eeEEEEEecCCCChHHHhccC-ccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCC-CceEEeccc
Q 002069 774 HSFVVYEYLEMGSLAMILSND-AAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLE-YEAHVSDFG 851 (973)
Q Consensus 774 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~-~~~kl~Dfg 851 (973)
..++||||+++ ++.+++... .....+++..++.++.||+.||+|||+. +|+||||||+||+++.+ +.+||+|||
T Consensus 127 ~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG 202 (420)
T 1j1b_A 127 YLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFG 202 (420)
T ss_dssp EEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred eEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccch
Confidence 36799999985 566655422 2234689999999999999999999999 99999999999999965 578999999
Q ss_pred ccccccCCCCcccccccccCcccccccccC-CCCCccchHHHHHHHHHHHhCCCCCcchhhhhhh------hhhhhhhhh
Q 002069 852 ISKFLKLGLSNRTELAGTFGYIAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISSICSS------LSSNLNIAL 924 (973)
Q Consensus 852 ~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~------~~~~~~~~~ 924 (973)
+++...... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||......... .+......+
T Consensus 203 ~a~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~ 281 (420)
T 1j1b_A 203 SAKQLVRGE-PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 281 (420)
T ss_dssp TCEECCTTC-CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHH
T ss_pred hhhhcccCC-CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 998765432 33456789999999998764 7899999999999999999999999754422110 000000111
Q ss_pred hhh----cCCCCCC----Cchh--hHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 925 DEM----LDPRLPT----PLRN--VQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 925 ~~~----~~~~~~~----~~~~--~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
... ....++. .+.. .......+.+++.+||+.||.+|||+.|+++.
T Consensus 282 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 282 REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp HHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 111 0001111 0100 01123467899999999999999999999863
No 262
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=2.4e-36 Score=343.47 Aligned_cols=260 Identities=20% Similarity=0.237 Sum_probs=198.5
Q ss_pred hcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCC--------CCceeeeceeee
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIR--------HRNIVKFYGFCS 770 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~--------h~niv~~~~~~~ 770 (973)
.++|++.+.||+|+||+||+|.. .+++.||||++... ....+.+.+|+.++++++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~ 111 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA----EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFK 111 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC----CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeeccee
Confidence 36899999999999999999954 57899999999742 234577889999999885 788999999987
Q ss_pred ----ccceeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCC---
Q 002069 771 ----HALHSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEY--- 843 (973)
Q Consensus 771 ----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~--- 843 (973)
.....++||||+. +++.+++.... ...+++.+++.++.||+.||+|||+++ +|+||||||+||+++.++
T Consensus 112 ~~~~~~~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~ 187 (397)
T 1wak_A 112 ISGVNGTHICMVFEVLG-HHLLKWIIKSN-YQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYI 187 (397)
T ss_dssp EEETTEEEEEEEECCCC-CBHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHH
T ss_pred ecCCCCceEEEEEeccC-ccHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhh
Confidence 5568899999994 56666554332 245899999999999999999999964 799999999999999775
Q ss_pred ----------------------------------------------ceEEecccccccccCCCCcccccccccCcccccc
Q 002069 844 ----------------------------------------------EAHVSDFGISKFLKLGLSNRTELAGTFGYIAPEL 877 (973)
Q Consensus 844 ----------------------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~ 877 (973)
.+||+|||.++..... .....||+.|+|||+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~---~~~~~gt~~y~aPE~ 264 (397)
T 1wak_A 188 RRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH---FTEDIQTRQYRSLEV 264 (397)
T ss_dssp HHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC---SCSCCSCGGGCCHHH
T ss_pred hhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc---CccCCCCCcccCChh
Confidence 7999999999876543 344578999999999
Q ss_pred cccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhh------------hhhhhhhhhh------hhhhcCC-----CC--
Q 002069 878 AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSIC------------SSLSSNLNIA------LDEMLDP-----RL-- 932 (973)
Q Consensus 878 ~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~------------~~~~~~~~~~------~~~~~~~-----~~-- 932 (973)
+.+..++.++|||||||++|||+||+.||....... ...+...... ....... .+
T Consensus 265 ~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (397)
T 1wak_A 265 LIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITK 344 (397)
T ss_dssp HHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCC
T ss_pred hcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccc
Confidence 999999999999999999999999999997432100 0000000000 0000000 00
Q ss_pred --CC--------CchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 933 --PT--------PLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 933 --~~--------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
+. ...........+.+++.+||+.||++|||++|+++.
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 345 LKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp CCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred cCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 00 001124456678999999999999999999999874
No 263
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=2.5e-36 Score=337.29 Aligned_cols=261 Identities=22% Similarity=0.299 Sum_probs=198.6
Q ss_pred hcCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeecc-----c
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHA-----L 773 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-----~ 773 (973)
.++|++.+.||+|+||.||+|... +|+.||||++.... .......+.+|+.++++++||||+++++++... .
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 87 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD--KPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFN 87 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCS--SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCC
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccc--cchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccc
Confidence 468999999999999999999654 78999999996432 233457788999999999999999999988654 6
Q ss_pred eeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEeccccc
Q 002069 774 HSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGIS 853 (973)
Q Consensus 774 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a 853 (973)
..++||||++ ++|.+++.. ..+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.+
T Consensus 88 ~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a 159 (353)
T 2b9h_A 88 EVYIIQELMQ-TDLHRVIST----QMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLA 159 (353)
T ss_dssp CEEEEECCCS-EEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEeccC-ccHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEecccc
Confidence 7899999997 689998864 3589999999999999999999999 9999999999999999999999999999
Q ss_pred ccccCCCCc----------ccccccccCccccccccc-CCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhh------
Q 002069 854 KFLKLGLSN----------RTELAGTFGYIAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSL------ 916 (973)
Q Consensus 854 ~~~~~~~~~----------~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~------ 916 (973)
+........ .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||..........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~ 239 (353)
T 2b9h_A 160 RIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGII 239 (353)
T ss_dssp EECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred cccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHh
Confidence 876533211 223578999999998754 678999999999999999999999997543211000
Q ss_pred hhh---------hhhhhhhhcC--CCCCC-C-chhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 917 SSN---------LNIALDEMLD--PRLPT-P-LRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 917 ~~~---------~~~~~~~~~~--~~~~~-~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
... ......+... +..+. . .......+..+.+++.+||+.||.+|||++|+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 240 GTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp CCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 000 0000000000 00000 0 00011234567899999999999999999999874
No 264
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=4.5e-36 Score=333.31 Aligned_cols=259 Identities=19% Similarity=0.245 Sum_probs=200.6
Q ss_pred hcCCcccccccCCCceeEEEEEc--CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCC------ceeeeceeeec
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL--PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHR------NIVKFYGFCSH 771 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~------niv~~~~~~~~ 771 (973)
.++|++.+.||+|+||+||+|.. .+++.||||++... ....+.+.+|+.+++.++|+ +++++++++..
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~ 88 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV----DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEH 88 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS----HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC----CchhHHHHHHHHHHHHhhhcCCCCceeeEeeeccccc
Confidence 46899999999999999999964 37889999998642 23357788899988887654 59999999999
Q ss_pred cceeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecC----------
Q 002069 772 ALHSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNL---------- 841 (973)
Q Consensus 772 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~---------- 841 (973)
.+..++||||+ +++|.+++..... ..+++.+++.++.|++.|++|||++ +|+||||||+||+++.
T Consensus 89 ~~~~~lv~e~~-~~~l~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~ 163 (339)
T 1z57_A 89 HGHICIVFELL-GLSTYDFIKENGF-LPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPK 163 (339)
T ss_dssp TTEEEEEEECC-CCBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC--
T ss_pred CCcEEEEEcCC-CCCHHHHHHhcCC-CCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCc
Confidence 99999999999 8999999975542 3588999999999999999999999 9999999999999987
Q ss_pred ---------CCceEEecccccccccCCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhh
Q 002069 842 ---------EYEAHVSDFGISKFLKLGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSI 912 (973)
Q Consensus 842 ---------~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~ 912 (973)
++.+||+|||.++.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 164 ~~~~~~~~~~~~~kl~Dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 240 (339)
T 1z57_A 164 IKRDERTLINPDIKVVDFGSATYDDE---HHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSK 240 (339)
T ss_dssp --CEEEEESCCCEEECCCSSCEETTS---CCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHH
T ss_pred cccccccccCCCceEeeCcccccCcc---ccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChH
Confidence 66899999999986543 234467899999999999999999999999999999999999999754321
Q ss_pred hh--hh----hhhhhhhhhhhc-------------------------CCCCCCCchhhHHHHHHHHHHHhcccCCCCCCC
Q 002069 913 CS--SL----SSNLNIALDEML-------------------------DPRLPTPLRNVQDKLISIMEVSISCLDESPTSR 961 (973)
Q Consensus 913 ~~--~~----~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 961 (973)
.. .. ............ .................+.+++.+||+.||.+|
T Consensus 241 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R 320 (339)
T 1z57_A 241 EHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKR 320 (339)
T ss_dssp HHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTS
T ss_pred HHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccc
Confidence 10 00 000000000000 000000000112345678899999999999999
Q ss_pred CCHHHHHHH
Q 002069 962 PTMQKVSQL 970 (973)
Q Consensus 962 Ps~~ev~~~ 970 (973)
||++|+++.
T Consensus 321 pt~~ell~h 329 (339)
T 1z57_A 321 ITLREALKH 329 (339)
T ss_dssp CCHHHHTTS
T ss_pred cCHHHHhcC
Confidence 999999864
No 265
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=6.4e-36 Score=333.68 Aligned_cols=255 Identities=21% Similarity=0.287 Sum_probs=195.8
Q ss_pred hcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccce----
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALH---- 774 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~---- 774 (973)
.++|.+.+.||+|+||.||+|.. .+|+.||||++..... .....+.+.+|+.+++.++||||+++++++.....
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 101 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQ-SEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 101 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTS-SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEeccccc-chHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccc
Confidence 36799999999999999999965 4799999999976533 23346788999999999999999999999976643
Q ss_pred --eEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccc
Q 002069 775 --SFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGI 852 (973)
Q Consensus 775 --~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~ 852 (973)
.++||||++ ++|.+++.. .+++.++..++.||+.|++|||++ +|+||||||+||+++.++.+||+|||.
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~ 172 (353)
T 3coi_A 102 YDFYLVMPFMQ-TDLQKIMGL-----KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGL 172 (353)
T ss_dssp CCCEEEEECCS-EEGGGTTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTC
T ss_pred eeEEEEecccc-CCHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeeccc
Confidence 499999998 688877642 488999999999999999999999 999999999999999999999999999
Q ss_pred cccccCCCCcccccccccCccccccccc-CCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhh--h----hhhhh----
Q 002069 853 SKFLKLGLSNRTELAGTFGYIAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSS--L----SSNLN---- 921 (973)
Q Consensus 853 a~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~--~----~~~~~---- 921 (973)
++..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||......... . +....
T Consensus 173 ~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 249 (353)
T 3coi_A 173 ARHADAE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQ 249 (353)
T ss_dssp TTC-----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHT
T ss_pred ccCCCCC---ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 9865432 334578999999999877 67899999999999999999999999754321100 0 00000
Q ss_pred --------hhhhhh---cCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 922 --------IALDEM---LDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 922 --------~~~~~~---~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
...... ..+.+... .......+.+++.+|++.||.+|||++++++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 250 KLNDKAAKSYIQSLPQTPRKDFTQL---FPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp TCSCHHHHHHHHTSCBCSSCCTTTT---CTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHhhHHHHHHHHhCcCCCCccHHHh---cCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 000000 00111111 11234567899999999999999999999863
No 266
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=4.2e-36 Score=329.29 Aligned_cols=252 Identities=22% Similarity=0.324 Sum_probs=196.2
Q ss_pred hcCCcccccccCCCceeEEEEEcCCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCC--CCceeeeceeeeccceeEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELPTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIR--HRNIVKFYGFCSHALHSFV 777 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~~~~~l 777 (973)
.++|++.+.||+|+||.||+|...+++.||||++...... ....+.+.+|+.++++++ |+||+++++++..++..++
T Consensus 27 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 105 (313)
T 3cek_A 27 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEAD-NQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 105 (313)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCC-HHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEE
T ss_pred cceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEecccccc-ccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEE
Confidence 4679999999999999999998888999999998754332 334678999999999996 5999999999999999999
Q ss_pred EEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEeccccccccc
Q 002069 778 VYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLK 857 (973)
Q Consensus 778 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 857 (973)
||| +.+++|.+++.... .+++.+++.++.|++.|++|||+. +|+||||||+||+++ ++.+||+|||.++...
T Consensus 106 v~e-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~ 177 (313)
T 3cek_A 106 VME-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 177 (313)
T ss_dssp EEC-CCSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCC--
T ss_pred EEe-cCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEE-CCeEEEeecccccccc
Confidence 999 56789999997543 678999999999999999999999 999999999999996 5899999999998765
Q ss_pred CCCC--cccccccccCccccccccc-----------CCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhh
Q 002069 858 LGLS--NRTELAGTFGYIAPELAYT-----------MKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIAL 924 (973)
Q Consensus 858 ~~~~--~~~~~~g~~~y~aPE~~~~-----------~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~ 924 (973)
.... ......|++.|+|||.+.+ ..++.++||||||+++|||++|+.||........ ..
T Consensus 178 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~--------~~ 249 (313)
T 3cek_A 178 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS--------KL 249 (313)
T ss_dssp ------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHH--------HH
T ss_pred CccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHH--------HH
Confidence 4322 2234578999999999875 4678899999999999999999999974321111 11
Q ss_pred hhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 925 DEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
....++........ .....+.+++.+||+.||.+||+++|+++.
T Consensus 250 ~~~~~~~~~~~~~~--~~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 250 HAIIDPNHEIEFPD--IPEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp HHHHCTTSCCCCCC--CSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHhcccccCCcc--cchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 11122211111110 012357889999999999999999999864
No 267
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=5.4e-36 Score=329.79 Aligned_cols=260 Identities=20% Similarity=0.258 Sum_probs=192.0
Q ss_pred hcCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeee--------
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCS-------- 770 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~-------- 770 (973)
.++|++.+.||+|+||.||+|... +++.||||++... .....+.+.+|+.++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 86 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT---DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTD 86 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC---SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC---ChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccc
Confidence 468999999999999999999665 6899999998753 2344678999999999999999999998873
Q ss_pred ------ccceeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeec-CCC
Q 002069 771 ------HALHSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLN-LEY 843 (973)
Q Consensus 771 ------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~-~~~ 843 (973)
+....++||||++ |+|.++++. ..+++..++.++.|++.|++|||+. +|+||||||+||+++ .++
T Consensus 87 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~ 158 (320)
T 2i6l_A 87 DVGSLTELNSVYIVQEYME-TDLANVLEQ----GPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDL 158 (320)
T ss_dssp ----CCSCSEEEEEEECCS-EEHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTT
T ss_pred ccccccccCceeEEeeccC-CCHHHHhhc----CCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCC
Confidence 3467899999998 699999864 3588999999999999999999999 999999999999997 567
Q ss_pred ceEEecccccccccCCC---CcccccccccCccccccccc-CCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhh---h
Q 002069 844 EAHVSDFGISKFLKLGL---SNRTELAGTFGYIAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSS---L 916 (973)
Q Consensus 844 ~~kl~Dfg~a~~~~~~~---~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~---~ 916 (973)
.+||+|||.++...... .......+++.|+|||.+.+ ..++.++||||||+++|||++|+.||......... .
T Consensus 159 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~ 238 (320)
T 2i6l_A 159 VLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLIL 238 (320)
T ss_dssp EEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred eEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 99999999998765332 12234567899999998765 67899999999999999999999999754321100 0
Q ss_pred h---hhhhhhhh-----------hhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 917 S---SNLNIALD-----------EMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 917 ~---~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
. ........ .................+..+.+++.+||+.||.+|||++|+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 239 ESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp HHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred HhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 0 00000000 000000000000011234568899999999999999999999863
No 268
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=1.9e-36 Score=354.26 Aligned_cols=263 Identities=26% Similarity=0.271 Sum_probs=201.4
Q ss_pred hcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeec------c
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSH------A 772 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------~ 772 (973)
.++|++.+.||+|+||+||+|.. .+|+.||||++.... .....+.+.+|+.++++++||||+++++++.. .
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~--~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~ 90 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQEL--SPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPN 90 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCC--CHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTT
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccC--CHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCC
Confidence 47899999999999999999965 478999999987643 23446789999999999999999999998765 6
Q ss_pred ceeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCc---eEEec
Q 002069 773 LHSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYE---AHVSD 849 (973)
Q Consensus 773 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~---~kl~D 849 (973)
+..++||||+++|+|.+++........+++..++.++.|++.|++|||+. +|+||||||+||+++.++. +||+|
T Consensus 91 ~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~D 167 (676)
T 3qa8_A 91 DLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIID 167 (676)
T ss_dssp SSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECS
T ss_pred CeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEcc
Confidence 67899999999999999998766555789999999999999999999999 9999999999999997765 99999
Q ss_pred ccccccccCCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhh-----hh
Q 002069 850 FGISKFLKLGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNI-----AL 924 (973)
Q Consensus 850 fg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~-----~~ 924 (973)
||.++...... ......||+.|+|||.+.+..++.++||||+|+++|||++|+.||........+....... ..
T Consensus 168 FG~a~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~ 246 (676)
T 3qa8_A 168 LGYAKELDQGE-LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVV 246 (676)
T ss_dssp CCCCCBTTSCC-CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCS
T ss_pred ccccccccccc-ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhh
Confidence 99998775542 3345679999999999999999999999999999999999999996432211111100000 00
Q ss_pred hhhc------CCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHH
Q 002069 925 DEML------DPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVS 968 (973)
Q Consensus 925 ~~~~------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~ 968 (973)
.... ....+.+.......+..+.+++.+||+.||++|||+++++
T Consensus 247 ~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL 296 (676)
T 3qa8_A 247 YDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNP 296 (676)
T ss_dssp CCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCC
T ss_pred hhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHh
Confidence 0000 1111111111223456788999999999999999998754
No 269
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=4.7e-36 Score=359.05 Aligned_cols=253 Identities=21% Similarity=0.352 Sum_probs=200.8
Q ss_pred hcCCcccccccCCCceeEEEEEcC----CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeecccee
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELP----TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHS 775 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 775 (973)
.++|++.+.||+|+||.||+|.+. .+..||||++.... .....+.+.+|+.++++++||||+++++++.+ +..
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~ 465 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT--SDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPV 465 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTT--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSC
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-Cce
Confidence 467999999999999999999653 34579999987543 23346789999999999999999999999854 568
Q ss_pred EEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEeccccccc
Q 002069 776 FVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKF 855 (973)
Q Consensus 776 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~ 855 (973)
++||||+++|+|.++++... ..+++..++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 466 ~lv~E~~~~g~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~~ 540 (656)
T 2j0j_A 466 WIIMELCTLGELRSFLQVRK--FSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRY 540 (656)
T ss_dssp EEEEECCTTCBHHHHHHHTT--TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCCS
T ss_pred EEEEEcCCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCee
Confidence 99999999999999997543 3588999999999999999999999 999999999999999999999999999987
Q ss_pred ccCCCC-cccccccccCcccccccccCCCCCccchHHHHHHHHHHHh-CCCCCcchhhhhhhhhhhhhhhhhhhcCCCCC
Q 002069 856 LKLGLS-NRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSICSSLSSNLNIALDEMLDPRLP 933 (973)
Q Consensus 856 ~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 933 (973)
...... ......+++.|+|||++.+..++.++|||||||++|||++ |..||....... .............+
T Consensus 541 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~------~~~~i~~~~~~~~~ 614 (656)
T 2j0j_A 541 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND------VIGRIENGERLPMP 614 (656)
T ss_dssp CCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH------HHHHHHHTCCCCCC
T ss_pred cCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHH------HHHHHHcCCCCCCC
Confidence 654322 2233456789999999998899999999999999999997 999997443211 00111111111122
Q ss_pred CCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 934 TPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 934 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
. ..+..+.+++.+||+.||.+|||+.++++.|+
T Consensus 615 ~------~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~ 647 (656)
T 2j0j_A 615 P------NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 647 (656)
T ss_dssp T------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred c------cccHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 1 12345788999999999999999999999875
No 270
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=2.8e-36 Score=333.55 Aligned_cols=253 Identities=19% Similarity=0.234 Sum_probs=172.1
Q ss_pred hcCCcccc-cccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeec----cc
Q 002069 700 TKNFDDEH-CIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSH----AL 773 (973)
Q Consensus 700 ~~~~~~~~-~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~ 773 (973)
.++|++.+ .||+|+||+||+|... +++.||||++... . ....+....++.++||||+++++++.. ..
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~---~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 99 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS----P---KARQEVDHHWQASGGPHIVCILDVYENMHHGKR 99 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS----H---HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc----H---HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCc
Confidence 57888855 6999999999999664 7999999998642 1 111222233566799999999999865 44
Q ss_pred eeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecC---CCceEEecc
Q 002069 774 HSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNL---EYEAHVSDF 850 (973)
Q Consensus 774 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~---~~~~kl~Df 850 (973)
..++||||+++|+|.+++.... ...+++.+++.++.|++.|++|||+. +|+||||||+||+++. ++.+||+||
T Consensus 100 ~~~lv~e~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Df 175 (336)
T 3fhr_A 100 CLLIIMECMEGGELFSRIQERG-DQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDF 175 (336)
T ss_dssp EEEEEEECCTTEEHHHHHHTC--CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCC
T ss_pred eEEEEEeccCCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEecc
Confidence 5899999999999999997654 24689999999999999999999999 9999999999999976 455999999
Q ss_pred cccccccCCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCC
Q 002069 851 GISKFLKLGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDP 930 (973)
Q Consensus 851 g~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 930 (973)
|.++..... ......||+.|+|||++.+..++.++||||||+++|+|++|+.||......... ..........
T Consensus 176 g~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-----~~~~~~~~~~ 248 (336)
T 3fhr_A 176 GFAKETTQN--ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAIS-----PGMKRRIRLG 248 (336)
T ss_dssp TTCEEC------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC------------------------
T ss_pred ccceecccc--ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhh-----hhHHHhhhcc
Confidence 999866532 233457899999999998888999999999999999999999999643321100 0000011111
Q ss_pred CCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 931 RLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 931 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
............+..+.+++.+||+.||.+|||++|+++.
T Consensus 249 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 249 QYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp --CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred ccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1111111112234457889999999999999999999873
No 271
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.1e-35 Score=336.56 Aligned_cols=336 Identities=22% Similarity=0.195 Sum_probs=265.0
Q ss_pred chhhhccCCCcccCchhhhhhccccccceEEcccccccCCcCchhhcCCccceeeccccccCCCCCccccCCCCCCcEEc
Q 002069 264 TKLVISCLGTNALSSSILEEIGNLKSLLHLQLNYNTLSGSIPLSLGSLTNLATLYFSTNALSGSIPNEITNLRSLSDLQL 343 (973)
Q Consensus 264 ~~L~~l~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 343 (973)
.+++.+++.+|.+..++...|..+++|++|++++|.+++..+..|..+++|++|++++|.+++..|..|.++++|++|+|
T Consensus 45 ~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 124 (390)
T 3o6n_A 45 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 124 (390)
T ss_dssp CCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEEC
Confidence 33444444444444555566777888888888888888777778888888888888888888777888888888888888
Q ss_pred CCCCCCCcchhccCCCCCCcEEEccCCcccCCCCcccccccccchhcccccccccCCCcccCCCCCCCEEEccCCCCCCC
Q 002069 344 SENTLNGSIPLALGNLTKLVSLDLSINKLSGSIPLSFASLTSLTTLYLYENSLCDSIPKEIGDMKSLSILDLSSNKLNGS 423 (973)
Q Consensus 344 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 423 (973)
++|.++...+..|.++++|++|++++|++++..+..|..+++|++|++++|++++. .+..+++|+.|++++|.+++
T Consensus 125 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~- 200 (390)
T 3o6n_A 125 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLST- 200 (390)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSE-
T ss_pred CCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeecccccccc-
Confidence 88888866666678888888888888888877788888888888888888888764 35667888999999998873
Q ss_pred cchhhhhhcccceEEEeeCcccccccCCCCCCCcccceeeccCCccCCCCCcccccccccccccccccccccccCccccc
Q 002069 424 IPLSLANLTNSLKVLYLSSNHIVGEIPLGHGKFSSLIQLILNNNELSGQLSPELGSLNQLEYLDLSANTFHNSIPESLGN 503 (973)
Q Consensus 424 ~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~i~~~~~~~l~~ 503 (973)
++ .+++|++|++++|.++.... ..+++|+.|++++|.+++. ..+..+++|++|++++|.+++..|..|..
T Consensus 201 ~~-----~~~~L~~L~l~~n~l~~~~~---~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~ 270 (390)
T 3o6n_A 201 LA-----IPIAVEELDASHNSINVVRG---PVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVK 270 (390)
T ss_dssp EE-----CCSSCSEEECCSSCCCEEEC---CCCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTT
T ss_pred cC-----CCCcceEEECCCCeeeeccc---cccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccc
Confidence 21 23478999999998886533 2347899999999999864 67888999999999999999888889999
Q ss_pred cccccEEeecCccCCCCCCcccccccccCeecccccccCCCcchhhcccccccccccccccccCccchhhhccccccEEe
Q 002069 504 LVKLHYLNLSNNQFSQKIPNPIEKLIHLSELDLSYKIFGEEIPSQVCSMQSLEKLNLSHNNLSGSISRCFEEMHWLSCID 583 (973)
Q Consensus 504 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~ 583 (973)
+++|++|+|++|++++. +..+..+++|++|++++|.++. .|..+..+++|++|+|++|++++.. +..++.|+.|+
T Consensus 271 l~~L~~L~L~~n~l~~~-~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~N~i~~~~---~~~~~~L~~L~ 345 (390)
T 3o6n_A 271 MQRLERLYISNNRLVAL-NLYGQPIPTLKVLDLSHNHLLH-VERNQPQFDRLENLYLDHNSIVTLK---LSTHHTLKNLT 345 (390)
T ss_dssp CSSCCEEECCSSCCCEE-ECSSSCCTTCCEEECCSSCCCC-CGGGHHHHTTCSEEECCSSCCCCCC---CCTTCCCSEEE
T ss_pred cccCCEEECCCCcCccc-CcccCCCCCCCEEECCCCccee-cCccccccCcCCEEECCCCccceeC---chhhccCCEEE
Confidence 99999999999999763 4556778899999999999874 4556788899999999999998664 56788999999
Q ss_pred CcCCCCCCCCCCCccCCCCCcchhcCCCCccCCCcc
Q 002069 584 ISYNALQGLIPNSTAFRDAPMLALQGNKRLCGDIKR 619 (973)
Q Consensus 584 l~~N~l~~~~~~~~~~~~~~~~~~~~N~~~c~~~~~ 619 (973)
+++|+|++.+.. ..+.......+.+++..|+.+..
T Consensus 346 l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~c~~~~~ 380 (390)
T 3o6n_A 346 LSHNDWDCNSLR-ALFRNVARPAVDDADQHCKIDYQ 380 (390)
T ss_dssp CCSSCEEHHHHH-HHTTTCCTTTBCCCCSCCCTTCE
T ss_pred cCCCCccchhHH-HHHHHHHhhcccccCceeccccc
Confidence 999999875432 33555666677888988975433
No 272
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=5.5e-36 Score=330.59 Aligned_cols=257 Identities=25% Similarity=0.339 Sum_probs=178.6
Q ss_pred hcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHH-HhhcCCCCceeeeceeeeccceeEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGN-ALTKIRHRNIVKFYGFCSHALHSFV 777 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~l 777 (973)
.++|++.+.||+|+||.||+|.. .+|+.||||++...... ....++..|+. +++.++||||+++++++.+++..++
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~l 98 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDE--KEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWI 98 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCH--HHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCc--hHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEE
Confidence 36799999999999999999966 47899999999765322 23455666665 6777899999999999999999999
Q ss_pred EEEecCCCChHHHhccCc--cccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEeccccccc
Q 002069 778 VYEYLEMGSLAMILSNDA--AAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKF 855 (973)
Q Consensus 778 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~ 855 (973)
||||+++ +|.+++.... ....+++..+..++.|++.|++|||+.. +++||||||+||+++.++.+||+|||.++.
T Consensus 99 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~ 175 (327)
T 3aln_A 99 CMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQ 175 (327)
T ss_dssp EECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSSSCC
T ss_pred EEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCCcee
Confidence 9999985 7877775311 1346899999999999999999999963 799999999999999999999999999987
Q ss_pred ccCCCCcccccccccCccccccc----ccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCC
Q 002069 856 LKLGLSNRTELAGTFGYIAPELA----YTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPR 931 (973)
Q Consensus 856 ~~~~~~~~~~~~g~~~y~aPE~~----~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (973)
..... ......|++.|+|||++ .+..++.++||||||+++|||++|+.||......... ........
T Consensus 176 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~--------~~~~~~~~ 246 (327)
T 3aln_A 176 LVDSI-AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQ--------LTQVVKGD 246 (327)
T ss_dssp -------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC---------------CCCCCSC
T ss_pred ccccc-ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHH--------HHHHhcCC
Confidence 65432 22334799999999998 4567899999999999999999999999743221111 11111111
Q ss_pred CCC-CchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 932 LPT-PLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 932 ~~~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
.+. ...........+.+++.+||+.||.+|||++++++.
T Consensus 247 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 247 PPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp CCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 110 000001123457899999999999999999999763
No 273
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=2.3e-35 Score=332.52 Aligned_cols=201 Identities=24% Similarity=0.246 Sum_probs=170.1
Q ss_pred HhcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCC-CC-----ceeeeceeeec
Q 002069 699 ATKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIR-HR-----NIVKFYGFCSH 771 (973)
Q Consensus 699 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~-----niv~~~~~~~~ 771 (973)
..++|++.+.||+|+||+||+|.. .+++.||||++... .....++..|+.+++.++ |+ +++++++++..
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~ 127 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK----KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMF 127 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS----HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEE
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc----HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeecc
Confidence 357899999999999999999965 47889999999742 233567778888887774 44 49999999999
Q ss_pred cceeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeec--CCCceEEec
Q 002069 772 ALHSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLN--LEYEAHVSD 849 (973)
Q Consensus 772 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~--~~~~~kl~D 849 (973)
.+..++||||++ ++|.+++..... ..+++..+..++.|++.|++|||++. .+|+||||||+||+++ .++.+||+|
T Consensus 128 ~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~-~~ivHrDlkp~NIll~~~~~~~~kL~D 204 (382)
T 2vx3_A 128 RNHLCLVFEMLS-YNLYDLLRNTNF-RGVSLNLTRKFAQQMCTALLFLATPE-LSIIHCDLKPENILLCNPKRSAIKIVD 204 (382)
T ss_dssp TTEEEEEEECCC-CBHHHHHHHTTT-SCCCHHHHHHHHHHHHHHHHHHTSTT-TCEECCCCSGGGEEESSTTSCCEEECC
T ss_pred CCceEEEEecCC-CCHHHHHhhcCc-CCCCHHHHHHHHHHHHHHHHHhccCC-CCEEcCCCCcccEEEecCCCCcEEEEe
Confidence 999999999996 599999975432 35899999999999999999999521 2899999999999995 468899999
Q ss_pred ccccccccCCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcch
Q 002069 850 FGISKFLKLGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFI 909 (973)
Q Consensus 850 fg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~ 909 (973)
||+++..... .....||+.|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus 205 FG~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 205 FGSSCQLGQR---IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp CTTCEETTCC---CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccCceecccc---cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 9999876432 34567899999999999999999999999999999999999999754
No 274
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=1e-35 Score=340.47 Aligned_cols=251 Identities=24% Similarity=0.339 Sum_probs=187.3
Q ss_pred cCCcccccccCCCceeEEEEEcCCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcC-CCCceeeeceeeeccceeEEEE
Q 002069 701 KNFDDEHCIGNGGQGSVYKAELPTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKI-RHRNIVKFYGFCSHALHSFVVY 779 (973)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 779 (973)
+.|...+.||+|+||+||.+...+|+.||||++... ..+.+.+|+.+++++ +||||+++++++.+++..++||
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~------~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~ 88 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID------FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIAL 88 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG------GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH------HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEE
Confidence 345567889999999998776668999999998632 235678899999876 8999999999999999999999
Q ss_pred EecCCCChHHHhccCccccC----CCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCC-------------
Q 002069 780 EYLEMGSLAMILSNDAAAEE----FGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLE------------- 842 (973)
Q Consensus 780 e~~~~~~L~~~l~~~~~~~~----~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~------------- 842 (973)
||++ |+|.++++....... .++..++.++.||+.|++|||+. +|+||||||+||+++.+
T Consensus 89 E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~ 164 (434)
T 2rio_A 89 ELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAEN 164 (434)
T ss_dssp CCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCS
T ss_pred ecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCc
Confidence 9996 699999976543211 13335678999999999999999 99999999999999754
Q ss_pred CceEEecccccccccCCCCc----ccccccccCccccccccc-------CCCCCccchHHHHHHHHHHHh-CCCCCcchh
Q 002069 843 YEAHVSDFGISKFLKLGLSN----RTELAGTFGYIAPELAYT-------MKVTEKCDVYSFGVLALEVIK-GKHPRDFIS 910 (973)
Q Consensus 843 ~~~kl~Dfg~a~~~~~~~~~----~~~~~g~~~y~aPE~~~~-------~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~ 910 (973)
+.+||+|||+++........ .....||+.|+|||++.+ ..++.++|||||||++|||+| |+.||....
T Consensus 165 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~ 244 (434)
T 2rio_A 165 LRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY 244 (434)
T ss_dssp CEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTT
T ss_pred eEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCch
Confidence 48999999999877654221 234579999999999875 568899999999999999999 999997432
Q ss_pred hhhhhhhhhhhhhhhhhcC-CCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 911 SICSSLSSNLNIALDEMLD-PRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
.... ........ +... .......+..+.+++.+||+.||.+|||+.++++.
T Consensus 245 ~~~~-------~i~~~~~~~~~~~--~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 296 (434)
T 2rio_A 245 SRES-------NIIRGIFSLDEMK--CLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH 296 (434)
T ss_dssp THHH-------HHHHTCCCCCCCT--TCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hhHH-------HHhcCCCCccccc--ccccccchHHHHHHHHHHhhCChhhCCCHHHHHhC
Confidence 1110 11111111 1111 11123455678899999999999999999999863
No 275
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.2e-35 Score=338.52 Aligned_cols=249 Identities=22% Similarity=0.319 Sum_probs=186.6
Q ss_pred hcCCcccccccCCCceeEEEEEcCCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcC-CCCceeeeceeeeccceeEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELPTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKI-RHRNIVKFYGFCSHALHSFVV 778 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv 778 (973)
..+|+..+.||+|+||+||.....+++.||||++..... ..+.+|+.+++++ +|||||++++++.+....++|
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~------~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv 96 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF------SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIA 96 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE------EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEE
T ss_pred cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH------HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEE
Confidence 356899999999999997655555899999999875322 2345789999998 899999999999999999999
Q ss_pred EEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecC---C--CceEEeccccc
Q 002069 779 YEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNL---E--YEAHVSDFGIS 853 (973)
Q Consensus 779 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~---~--~~~kl~Dfg~a 853 (973)
|||++ |+|.+++..... ...+.+++.++.||+.|++|||+. +|+||||||+||+++. + ..+||+|||+|
T Consensus 97 ~E~~~-g~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a 170 (432)
T 3p23_A 97 IELCA-ATLQEYVEQKDF--AHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLC 170 (432)
T ss_dssp EECCS-EEHHHHHHSSSC--CCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEE
T ss_pred EECCC-CCHHHHHHhcCC--CccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccce
Confidence 99997 699999975542 334456788999999999999999 9999999999999953 2 35789999999
Q ss_pred ccccCCC---CcccccccccCcccccccc---cCCCCCccchHHHHHHHHHHHh-CCCCCcchhhhhhhhhhhhhhhhhh
Q 002069 854 KFLKLGL---SNRTELAGTFGYIAPELAY---TMKVTEKCDVYSFGVLALEVIK-GKHPRDFISSICSSLSSNLNIALDE 926 (973)
Q Consensus 854 ~~~~~~~---~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 926 (973)
+...... .......||+.|+|||++. ...++.++||||+||++|||++ |..||....... ...
T Consensus 171 ~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~----------~~~ 240 (432)
T 3p23_A 171 KKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQ----------ANI 240 (432)
T ss_dssp ECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHH----------HHH
T ss_pred eeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHH----------HHH
Confidence 8775432 2234467999999999987 4567889999999999999999 999986332110 000
Q ss_pred hcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 927 MLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 927 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
...................+.+++.+||+.||.+|||+++|++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~h 284 (432)
T 3p23_A 241 LLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKH 284 (432)
T ss_dssp HTTCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HhccCCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhC
Confidence 11110001111112234457789999999999999999999863
No 276
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=1e-35 Score=335.20 Aligned_cols=260 Identities=18% Similarity=0.224 Sum_probs=197.4
Q ss_pred hcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCC-----------CCceeeece
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIR-----------HRNIVKFYG 767 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-----------h~niv~~~~ 767 (973)
.++|++.+.||+|+||+||+|.. .+++.||||++... ....+.+.+|+.++++++ |+||+++++
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~ 93 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD----KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLD 93 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC----ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHH
Confidence 36899999999999999999965 58899999998742 233577888999988875 899999999
Q ss_pred eeeccc----eeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeec---
Q 002069 768 FCSHAL----HSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLN--- 840 (973)
Q Consensus 768 ~~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~--- 840 (973)
++...+ ..++||||+ +++|.+++.... ...+++..++.++.||+.||+|||+++ +|+||||||+||+++
T Consensus 94 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~ 169 (373)
T 1q8y_A 94 HFNHKGPNGVHVVMVFEVL-GENLLALIKKYE-HRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVD 169 (373)
T ss_dssp EEEEEETTEEEEEEEECCC-CEEHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEE
T ss_pred HhhccCCCCceEEEEEecC-CCCHHHHHHHhh-ccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccC
Confidence 987654 789999999 899999997543 235899999999999999999999963 899999999999995
Q ss_pred ---CCCceEEecccccccccCCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhh
Q 002069 841 ---LEYEAHVSDFGISKFLKLGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLS 917 (973)
Q Consensus 841 ---~~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~ 917 (973)
..+.+||+|||.++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...........
T Consensus 170 ~~~~~~~~kl~Dfg~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~ 246 (373)
T 1q8y_A 170 SPENLIQIKIADLGNACWYDEH---YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKD 246 (373)
T ss_dssp TTTTEEEEEECCCTTCEETTBC---CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CH
T ss_pred CCcCcceEEEcccccccccCCC---CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCCh
Confidence 3348999999999876532 3345789999999999999999999999999999999999999974321000000
Q ss_pred -hhhhhhh-----------------hhhcCC-----CCC------------CCchhhHHHHHHHHHHHhcccCCCCCCCC
Q 002069 918 -SNLNIAL-----------------DEMLDP-----RLP------------TPLRNVQDKLISIMEVSISCLDESPTSRP 962 (973)
Q Consensus 918 -~~~~~~~-----------------~~~~~~-----~~~------------~~~~~~~~~~~~l~~li~~cl~~dP~~RP 962 (973)
....... ...... .+. ............+.+++.+||+.||.+||
T Consensus 247 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp 326 (373)
T 1q8y_A 247 DDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRA 326 (373)
T ss_dssp HHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCB
T ss_pred HHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccC
Confidence 0000000 000000 000 00011134567789999999999999999
Q ss_pred CHHHHHHH
Q 002069 963 TMQKVSQL 970 (973)
Q Consensus 963 s~~ev~~~ 970 (973)
|++|+++.
T Consensus 327 t~~ell~h 334 (373)
T 1q8y_A 327 DAGGLVNH 334 (373)
T ss_dssp CHHHHHTC
T ss_pred CHHHHhhC
Confidence 99999874
No 277
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=7.9e-36 Score=328.15 Aligned_cols=254 Identities=21% Similarity=0.310 Sum_probs=180.5
Q ss_pred hcCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEE
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVV 778 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 778 (973)
.++|++.+.||+|+||.||+|... +|+.||||++...... ....+.+.++..+++.++||||+++++++.+++..++|
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv 102 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNK-EENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIA 102 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCH-HHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccc-hHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEE
Confidence 467999999999999999999664 7999999999765332 22234455555678888999999999999999999999
Q ss_pred EEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhh-CCCCCeEeecCCCCCeeecCCCceEEeccccccccc
Q 002069 779 YEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHT-NCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLK 857 (973)
Q Consensus 779 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~-~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 857 (973)
|||+ ++.+..+.... ...+++..++.++.|++.|++|||+ . +++||||||+||+++.++.+||+|||.+....
T Consensus 103 ~e~~-~~~~~~l~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 176 (318)
T 2dyl_A 103 MELM-GTCAEKLKKRM--QGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRLV 176 (318)
T ss_dssp ECCC-SEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred Eecc-CCcHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhcc
Confidence 9999 45565555322 2468999999999999999999998 5 89999999999999999999999999997665
Q ss_pred CCCCcccccccccCcccccccc-----cCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCC
Q 002069 858 LGLSNRTELAGTFGYIAPELAY-----TMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRL 932 (973)
Q Consensus 858 ~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 932 (973)
.. .......|++.|+|||++. ...++.++||||||+++|||++|+.||........... ... ....+..
T Consensus 177 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~----~~~-~~~~~~~ 250 (318)
T 2dyl_A 177 DD-KAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLT----KVL-QEEPPLL 250 (318)
T ss_dssp -----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHH----HHH-HSCCCCC
T ss_pred CC-ccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHH----HHh-ccCCCCC
Confidence 43 2233457899999999984 45688899999999999999999999974321111110 011 1111111
Q ss_pred CCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 933 PTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 933 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
+... ..+..+.+++.+||+.||.+||+++++++.
T Consensus 251 ~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 251 PGHM----GFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp CSSS----CCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred CccC----CCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 1111 123357789999999999999999999863
No 278
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=2.6e-35 Score=329.52 Aligned_cols=259 Identities=19% Similarity=0.252 Sum_probs=197.4
Q ss_pred hcCCcccccccCCCceeEEEEEcC-CC-CEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCc------eeeeceeeec
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELP-TG-EIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRN------IVKFYGFCSH 771 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~-~~-~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~~~~~~~~ 771 (973)
.++|++.+.||+|+||+||+|... ++ +.||||++... ....+.+.+|+.++++++|++ ++.+++++..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~ 93 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV----GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNF 93 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc----ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeee
Confidence 468999999999999999999653 44 68999999642 233577888999998887655 8999999999
Q ss_pred cceeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeee------------
Q 002069 772 ALHSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLL------------ 839 (973)
Q Consensus 772 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill------------ 839 (973)
.+..++||||+ ++++.+++.... ...+++.+++.++.||+.||+|||+. +|+||||||+||++
T Consensus 94 ~~~~~lv~e~~-~~~l~~~l~~~~-~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~ 168 (355)
T 2eu9_A 94 HGHMCIAFELL-GKNTFEFLKENN-FQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEH 168 (355)
T ss_dssp TTEEEEEEECC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC
T ss_pred CCeEEEEEecc-CCChHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeccccccccccc
Confidence 99999999999 566777765433 23589999999999999999999999 99999999999999
Q ss_pred -------cCCCceEEecccccccccCCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhh
Q 002069 840 -------NLEYEAHVSDFGISKFLKLGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSI 912 (973)
Q Consensus 840 -------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~ 912 (973)
+.++.+||+|||.++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 169 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 245 (355)
T 2eu9_A 169 KSCEEKSVKNTSIRVADFGSATFDHEH---HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENR 245 (355)
T ss_dssp -CCCEEEESCCCEEECCCTTCEETTSC---CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred ccccccccCCCcEEEeecCcccccccc---ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH
Confidence 56789999999999865432 34467999999999999999999999999999999999999999754321
Q ss_pred hh------hhhhhhhhhhhhhc------C-------------------CCCCCCchhhHHHHHHHHHHHhcccCCCCCCC
Q 002069 913 CS------SLSSNLNIALDEML------D-------------------PRLPTPLRNVQDKLISIMEVSISCLDESPTSR 961 (973)
Q Consensus 913 ~~------~~~~~~~~~~~~~~------~-------------------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 961 (973)
.. .............. . +...............+.+++.+||+.||.+|
T Consensus 246 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R 325 (355)
T 2eu9_A 246 EHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQR 325 (355)
T ss_dssp HHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTS
T ss_pred HHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhC
Confidence 10 00000000000000 0 00000000111234568899999999999999
Q ss_pred CCHHHHHHH
Q 002069 962 PTMQKVSQL 970 (973)
Q Consensus 962 Ps~~ev~~~ 970 (973)
||++|+++.
T Consensus 326 pt~~e~l~h 334 (355)
T 2eu9_A 326 ITLAEALLH 334 (355)
T ss_dssp CCHHHHTTS
T ss_pred cCHHHHhcC
Confidence 999999863
No 279
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1.6e-34 Score=321.76 Aligned_cols=306 Identities=28% Similarity=0.422 Sum_probs=160.8
Q ss_pred cCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCcccCCccccCccccceeeccCCcCCCCCCCccccCCccce
Q 002069 45 GRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSLSDLRLSNNSLNGSIPSSLGNLTNLVT 124 (973)
Q Consensus 45 ~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 124 (973)
..+++|++|++++|.+. .+|. ++.+++|++|++++|+++ .+|. +..+++|++|++++|+++. +| .+.++++|++
T Consensus 41 ~~l~~L~~L~l~~~~i~-~~~~-~~~~~~L~~L~l~~n~i~-~~~~-~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~~ 114 (347)
T 4fmz_A 41 EELESITKLVVAGEKVA-SIQG-IEYLTNLEYLNLNGNQIT-DISP-LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLRE 114 (347)
T ss_dssp HHHTTCSEEECCSSCCC-CCTT-GGGCTTCCEEECCSSCCC-CCGG-GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSE
T ss_pred hhcccccEEEEeCCccc-cchh-hhhcCCccEEEccCCccc-cchh-hhcCCcCCEEEccCCcccC-ch-HHcCCCcCCE
Confidence 34445555555555544 3332 444555555555555554 2332 4455555555555555542 22 3455555555
Q ss_pred eecccccccccCcccccccCCCCceecccCCCCCCCCccccCccccceeeecccccCCCCCccccccCccceeecccccc
Q 002069 125 LYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSGAIPFSLGNLTNLVTLYIGINALSGSIPNEIGNLKSLSDLRLDYNTL 204 (973)
Q Consensus 125 L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l 204 (973)
|++++|++++ ++. +.++++|++|++++|.....++ .+..+++|++|++++|.+.+..+ +..+++|++|++++|.+
T Consensus 115 L~l~~n~i~~-~~~-~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l 189 (347)
T 4fmz_A 115 LYLNEDNISD-ISP-LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQI 189 (347)
T ss_dssp EECTTSCCCC-CGG-GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCC
T ss_pred EECcCCcccC-chh-hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcc
Confidence 5555555542 222 4555555555555553332222 24555555555555555542221 55555555555555555
Q ss_pred ccccccccCCCCcccEEecCCcccCCCCCccccccccccceecccccccCCCCcccCCcchhhhccCCCcccCchhhhhh
Q 002069 205 SGSILYSFGNLTKLEILYLDVNALSGLIPNEIGNLKSLLALQLNYNTLSGSIPCSFGNLTKLVISCLGTNALSSSILEEI 284 (973)
Q Consensus 205 ~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~n~i~~~~~~~~ 284 (973)
.++.+ +..+++|+.|++++|.+++..+ +..+++|++|++++|.+++..+ +
T Consensus 190 ~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--------------------------~ 239 (347)
T 4fmz_A 190 EDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--------------------------L 239 (347)
T ss_dssp CCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--------------------------G
T ss_pred ccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--------------------------h
Confidence 54333 5555556666666665554422 5555556666666555543211 3
Q ss_pred ccccccceEEcccccccCCcCchhhcCCccceeeccccccCCCCCccccCCCCCCcEEcCCCCCCCcchhccCCCCCCcE
Q 002069 285 GNLKSLLHLQLNYNTLSGSIPLSLGSLTNLATLYFSTNALSGSIPNEITNLRSLSDLQLSENTLNGSIPLALGNLTKLVS 364 (973)
Q Consensus 285 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 364 (973)
..+++|++|++++|.+++. ..+..+++|++|++++|.+++. ..+..+++|++|++++|.+++..+..++++++|++
T Consensus 240 ~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~ 315 (347)
T 4fmz_A 240 ANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTT 315 (347)
T ss_dssp TTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSE
T ss_pred hcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCE
Confidence 3445555555555555532 3455566666666666666543 34566666666666666666666666666666666
Q ss_pred EEccCCcccCCCCcccccccccchhcccccccc
Q 002069 365 LDLSINKLSGSIPLSFASLTSLTTLYLYENSLC 397 (973)
Q Consensus 365 L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 397 (973)
|++++|++++..| +..+++|++|++++|.|+
T Consensus 316 L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 316 LFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp EECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred EEccCCccccccC--hhhhhccceeehhhhccc
Confidence 6666666665444 566666666666666653
No 280
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=3.5e-36 Score=330.67 Aligned_cols=246 Identities=20% Similarity=0.268 Sum_probs=199.5
Q ss_pred HHhcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcc---hhhHHHHHHHHHHhhcCC--CCceeeeceeeec
Q 002069 698 RATKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGE---MACQQEFLNEGNALTKIR--HRNIVKFYGFCSH 771 (973)
Q Consensus 698 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~---~~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~ 771 (973)
....+|++.+.||+|+||.||+|.. .+++.||||++....... ....+.+.+|+.++++++ |+||+++++++..
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~ 119 (320)
T 3a99_A 40 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER 119 (320)
T ss_dssp CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred CccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec
Confidence 3457899999999999999999954 588999999986543221 011245677899999885 5999999999999
Q ss_pred cceeEEEEEecCC-CChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeec-CCCceEEec
Q 002069 772 ALHSFVVYEYLEM-GSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLN-LEYEAHVSD 849 (973)
Q Consensus 772 ~~~~~lv~e~~~~-~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~-~~~~~kl~D 849 (973)
++..++||||+.+ ++|.+++... ..+++..++.++.|++.|++|||+. +|+||||||+||+++ .++.+||+|
T Consensus 120 ~~~~~lv~e~~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~D 193 (320)
T 3a99_A 120 PDSFVLILERPEPVQDLFDFITER---GALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLID 193 (320)
T ss_dssp SSEEEEEEECCSSEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECC
T ss_pred CCcEEEEEEcCCCCccHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEee
Confidence 9999999999986 8999998653 3688999999999999999999999 999999999999999 779999999
Q ss_pred ccccccccCCCCcccccccccCcccccccccCCC-CCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhc
Q 002069 850 FGISKFLKLGLSNRTELAGTFGYIAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEML 928 (973)
Q Consensus 850 fg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 928 (973)
||.++..... ......||+.|+|||++.+..+ +.++||||||+++|||++|+.||........ ..
T Consensus 194 fg~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~-----------~~- 259 (320)
T 3a99_A 194 FGSGALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR-----------GQ- 259 (320)
T ss_dssp CTTCEECCSS--CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHH-----------CC-
T ss_pred Cccccccccc--cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhhhc-----------cc-
Confidence 9999876543 2344679999999999887665 6789999999999999999999974432110 00
Q ss_pred CCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 929 DPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 929 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
...+.. .+..+.+++.+||+.||++|||++++++.
T Consensus 260 -~~~~~~------~~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 260 -VFFRQR------VSSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp -CCCSSC------CCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred -cccccc------CCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 011111 12357789999999999999999999874
No 281
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.5e-35 Score=324.93 Aligned_cols=248 Identities=21% Similarity=0.263 Sum_probs=191.9
Q ss_pred HHHHhcCCcccccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcch---hhHHHHHHHHHHhhcC----CCCceeeece
Q 002069 696 IIRATKNFDDEHCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEM---ACQQEFLNEGNALTKI----RHRNIVKFYG 767 (973)
Q Consensus 696 ~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~---~~~~~~~~e~~~l~~l----~h~niv~~~~ 767 (973)
.....++|++.+.||+|+||.||+|.. .+++.||||++........ .....+.+|+.++.++ +||||+++++
T Consensus 26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~ 105 (312)
T 2iwi_A 26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD 105 (312)
T ss_dssp -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence 344567899999999999999999965 4789999999975433221 1234456788888887 8999999999
Q ss_pred eeeccceeEEEEEe-cCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeec-CCCce
Q 002069 768 FCSHALHSFVVYEY-LEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLN-LEYEA 845 (973)
Q Consensus 768 ~~~~~~~~~lv~e~-~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~-~~~~~ 845 (973)
++...+..++|||| +++++|.+++... ..+++.+++.++.|++.|++|||+. +|+||||||+||+++ .++.+
T Consensus 106 ~~~~~~~~~~v~e~~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~ 179 (312)
T 2iwi_A 106 WFETQEGFMLVLERPLPAQDLFDYITEK---GPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCA 179 (312)
T ss_dssp EC-----CEEEEECCSSEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEE
T ss_pred EEecCCeEEEEEEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeE
Confidence 99998899999999 7899999999753 3589999999999999999999999 999999999999999 78999
Q ss_pred EEecccccccccCCCCcccccccccCcccccccccCCCC-CccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhh
Q 002069 846 HVSDFGISKFLKLGLSNRTELAGTFGYIAPELAYTMKVT-EKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIAL 924 (973)
Q Consensus 846 kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~-~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~ 924 (973)
||+|||.++..... ......|++.|+|||++.+..+. .++||||+|+++|||++|+.||........
T Consensus 180 kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---------- 247 (312)
T 2iwi_A 180 KLIDFGSGALLHDE--PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILE---------- 247 (312)
T ss_dssp EECCCSSCEECCSS--CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHH----------
T ss_pred EEEEcchhhhcccC--cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHHhh----------
Confidence 99999999876543 33456799999999998876664 589999999999999999999974332110
Q ss_pred hhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 925 DEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 925 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
. ...++.. ....+.+++.+||+.||++|||++|+++.
T Consensus 248 -~--~~~~~~~------~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 248 -A--ELHFPAH------VSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp -T--CCCCCTT------SCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred -h--ccCCccc------CCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 1111111 22347789999999999999999999874
No 282
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=3.3e-35 Score=351.10 Aligned_cols=333 Identities=22% Similarity=0.201 Sum_probs=268.4
Q ss_pred hhccCCCcccCchhhhhhccccccceEEcccccccCCcCchhhcCCccceeeccccccCCCCCccccCCCCCCcEEcCCC
Q 002069 267 VISCLGTNALSSSILEEIGNLKSLLHLQLNYNTLSGSIPLSLGSLTNLATLYFSTNALSGSIPNEITNLRSLSDLQLSEN 346 (973)
Q Consensus 267 ~~l~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 346 (973)
+.+.+.+|.+..+++..|.++++|+.|++++|.+++..+..|+.+++|++|+|++|.+++..|..|+++++|++|+|++|
T Consensus 54 ~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 133 (597)
T 3oja_B 54 KIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERN 133 (597)
T ss_dssp SEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred eEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCC
Confidence 33444444444555566777888888888888888777778888888888888888888888888888888888888888
Q ss_pred CCCCcchhccCCCCCCcEEEccCCcccCCCCcccccccccchhcccccccccCCCcccCCCCCCCEEEccCCCCCCCcch
Q 002069 347 TLNGSIPLALGNLTKLVSLDLSINKLSGSIPLSFASLTSLTTLYLYENSLCDSIPKEIGDMKSLSILDLSSNKLNGSIPL 426 (973)
Q Consensus 347 ~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 426 (973)
.+++..+..|+++++|++|+|++|.+++..|..|.++++|++|+|++|.+++. .+..+++|+.|++++|.+++ ++
T Consensus 134 ~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---~~~~l~~L~~L~l~~n~l~~-l~- 208 (597)
T 3oja_B 134 DLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLST-LA- 208 (597)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC---CGGGCTTCSEEECCSSCCSE-EE-
T ss_pred CCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCc---ChhhhhhhhhhhcccCcccc-cc-
Confidence 88877777778888888888888888888888888888888888888888764 25567888999999998873 21
Q ss_pred hhhhhcccceEEEeeCcccccccCCCCCCCcccceeeccCCccCCCCCcccccccccccccccccccccccCcccccccc
Q 002069 427 SLANLTNSLKVLYLSSNHIVGEIPLGHGKFSSLIQLILNNNELSGQLSPELGSLNQLEYLDLSANTFHNSIPESLGNLVK 506 (973)
Q Consensus 427 ~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~Ls~N~i~~~~~~~l~~l~~ 506 (973)
.+.+|+.|++++|.++...+.. .++|+.|++++|.+++ +..+..+++|+.|+|++|.+++..|..|..+++
T Consensus 209 ----~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 279 (597)
T 3oja_B 209 ----IPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQR 279 (597)
T ss_dssp ----CCTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSS
T ss_pred ----CCchhheeeccCCccccccccc---CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccC
Confidence 2347899999999888554432 3689999999999986 377889999999999999999888999999999
Q ss_pred ccEEeecCccCCCCCCcccccccccCeecccccccCCCcchhhcccccccccccccccccCccchhhhccccccEEeCcC
Q 002069 507 LHYLNLSNNQFSQKIPNPIEKLIHLSELDLSYKIFGEEIPSQVCSMQSLEKLNLSHNNLSGSISRCFEEMHWLSCIDISY 586 (973)
Q Consensus 507 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~ 586 (973)
|+.|+|++|.+++ +|..+..+++|+.|+|++|.++ .+|..+..+++|++|+|++|++++.. +..++.|+.|++++
T Consensus 280 L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~---~~~~~~L~~L~l~~ 354 (597)
T 3oja_B 280 LERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK---LSTHHTLKNLTLSH 354 (597)
T ss_dssp CCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC---CCTTCCCSEEECCS
T ss_pred CCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcC---hhhcCCCCEEEeeC
Confidence 9999999999986 4556677899999999999998 46667788999999999999998764 56678999999999
Q ss_pred CCCCCCCCCCccCCCCCcchhcCCCCccCCCcc
Q 002069 587 NALQGLIPNSTAFRDAPMLALQGNKRLCGDIKR 619 (973)
Q Consensus 587 N~l~~~~~~~~~~~~~~~~~~~~N~~~c~~~~~ 619 (973)
|+|++.+.. ..+..+....+.+++..|+....
T Consensus 355 N~~~~~~~~-~~~~~~~~~~~~~~~~~C~~~~~ 386 (597)
T 3oja_B 355 NDWDCNSLR-ALFRNVARPAVDDADQHCKIDYQ 386 (597)
T ss_dssp SCEEHHHHH-HHTTTCCTTTBCCCCCCCCTTCE
T ss_pred CCCCChhHH-HHHHHHhhhccccccccCCcchh
Confidence 999876532 33556666678899999987544
No 283
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=6.4e-34 Score=316.94 Aligned_cols=308 Identities=28% Similarity=0.411 Sum_probs=248.1
Q ss_pred ccCCCCCCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCcccCCccccCcccc
Q 002069 19 EIGHLTHLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSL 98 (973)
Q Consensus 19 ~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L 98 (973)
.+..+++|++|++++|.++. +| .+..+++|++|++++|+++ .+|. +..+++|++|++++|.++ .+| .+..+++|
T Consensus 39 ~~~~l~~L~~L~l~~~~i~~-~~-~~~~~~~L~~L~l~~n~i~-~~~~-~~~l~~L~~L~L~~n~i~-~~~-~~~~l~~L 112 (347)
T 4fmz_A 39 TQEELESITKLVVAGEKVAS-IQ-GIEYLTNLEYLNLNGNQIT-DISP-LSNLVKLTNLYIGTNKIT-DIS-ALQNLTNL 112 (347)
T ss_dssp CHHHHTTCSEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCC-CCGG-GTTCTTCCEEECCSSCCC-CCG-GGTTCTTC
T ss_pred cchhcccccEEEEeCCcccc-ch-hhhhcCCccEEEccCCccc-cchh-hhcCCcCCEEEccCCccc-Cch-HHcCCCcC
Confidence 34577888888888888874 44 4888888888888888888 4555 888888888888888887 444 58888888
Q ss_pred ceeeccCCcCCCCCCCccccCCccceeecccccccccCcccccccCCCCceecccCCCCCCCCccccCccccceeeeccc
Q 002069 99 SDLRLSNNSLNGSIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSGAIPFSLGNLTNLVTLYIGIN 178 (973)
Q Consensus 99 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n 178 (973)
++|++++|++++ +|. +..+++|++|++++|.... .+..+..+++|++|++++|.+++..+ +..+++|+.|++++|
T Consensus 113 ~~L~l~~n~i~~-~~~-~~~l~~L~~L~l~~n~~~~-~~~~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n 187 (347)
T 4fmz_A 113 RELYLNEDNISD-ISP-LANLTKMYSLNLGANHNLS-DLSPLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYN 187 (347)
T ss_dssp SEEECTTSCCCC-CGG-GTTCTTCCEEECTTCTTCC-CCGGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTS
T ss_pred CEEECcCCcccC-chh-hccCCceeEEECCCCCCcc-cccchhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCC
Confidence 888888888874 444 8888888888888886553 34448888888888888888875443 778888888888888
Q ss_pred ccCCCCCccccccCccceeeccccccccccccccCCCCcccEEecCCcccCCCCCccccccccccceecccccccCCCCc
Q 002069 179 ALSGSIPNEIGNLKSLSDLRLDYNTLSGSILYSFGNLTKLEILYLDVNALSGLIPNEIGNLKSLLALQLNYNTLSGSIPC 258 (973)
Q Consensus 179 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 258 (973)
.+.+ ++. +..+++|+.|++++|.+.+..+ +..+++|++|++++|.+++..+ +..+++|++|++++|.+++. .
T Consensus 188 ~l~~-~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~ 259 (347)
T 4fmz_A 188 QIED-ISP-LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--N 259 (347)
T ss_dssp CCCC-CGG-GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--G
T ss_pred cccc-ccc-ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--h
Confidence 8884 333 7888888888888888886654 7888888888888888887643 88888888888888888764 4
Q ss_pred ccCCcchhhhccCCCcccCchhhhhhccccccceEEcccccccCCcCchhhcCCccceeeccccccCCCCCccccCCCCC
Q 002069 259 SFGNLTKLVISCLGTNALSSSILEEIGNLKSLLHLQLNYNTLSGSIPLSLGSLTNLATLYFSTNALSGSIPNEITNLRSL 338 (973)
Q Consensus 259 ~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 338 (973)
.+..+++|+.+++++|.++.. ..+..+++|+.|++++|.+++..+..++.+++|++|++++|.+++..| +..+++|
T Consensus 260 ~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L 335 (347)
T 4fmz_A 260 AVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKM 335 (347)
T ss_dssp GGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTC
T ss_pred hHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhcc
Confidence 678888888888888888876 468889999999999999998888899999999999999999997666 8889999
Q ss_pred CcEEcCCCCCC
Q 002069 339 SDLQLSENTLN 349 (973)
Q Consensus 339 ~~L~L~~N~l~ 349 (973)
++|++++|.|+
T Consensus 336 ~~L~l~~N~i~ 346 (347)
T 4fmz_A 336 DSADFANQVIK 346 (347)
T ss_dssp SEESSSCC---
T ss_pred ceeehhhhccc
Confidence 99999999886
No 284
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=3.4e-34 Score=324.40 Aligned_cols=308 Identities=22% Similarity=0.226 Sum_probs=180.3
Q ss_pred CCCcEEEccCCcCcccCCc-cccCccccceeeccCCcCCCCCCCccccCCccceeecccccccccCcccccccCCCCcee
Q 002069 72 TSLIYIDIGNNLLSGSIPN-EVGSLKSLSDLRLSNNSLNGSIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQ 150 (973)
Q Consensus 72 ~~L~~L~l~~n~l~~~~p~-~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 150 (973)
.++++|++++|.++ .+|. .+..+++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|+++++|++|+
T Consensus 45 ~~l~~l~l~~~~l~-~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 45 NNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp CCCSEEEEESCEES-EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEecCCchh-hCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 44444444444444 2222 234444444444444444433333444444444444444444444444444444455555
Q ss_pred cccCCCCCCCCccccCccccceeeecccccCCCCCccccccCccceeeccccccccccccccCCCCcccEEecCCcccCC
Q 002069 151 VSYNTLSGAIPFSLGNLTNLVTLYIGINALSGSIPNEIGNLKSLSDLRLDYNTLSGSILYSFGNLTKLEILYLDVNALSG 230 (973)
Q Consensus 151 l~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~ 230 (973)
+++|+++...+..|.++++|++|++++|++++..|..+.++++|++|++++|+++++. +..+++|+.|++++|.+++
T Consensus 124 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~---~~~l~~L~~L~l~~n~l~~ 200 (390)
T 3o6n_A 124 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLST 200 (390)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC---GGGCTTCSEEECCSSCCSE
T ss_pred CCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccc---cccccccceeecccccccc
Confidence 5555444333333444555555555555554444444555555555555555555432 3344555555555555543
Q ss_pred CCCccccccccccceecccccccCCCCcccCCcchhhhccCCCcccCchhhhhhccccccceEEcccccccCCcCchhhc
Q 002069 231 LIPNEIGNLKSLLALQLNYNTLSGSIPCSFGNLTKLVISCLGTNALSSSILEEIGNLKSLLHLQLNYNTLSGSIPLSLGS 310 (973)
Q Consensus 231 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 310 (973)
+ ...++|++|++++|.++.... ...++|+.|++++|.+++. ..+..
T Consensus 201 ~-----~~~~~L~~L~l~~n~l~~~~~---------------------------~~~~~L~~L~l~~n~l~~~--~~l~~ 246 (390)
T 3o6n_A 201 L-----AIPIAVEELDASHNSINVVRG---------------------------PVNVELTILKLQHNNLTDT--AWLLN 246 (390)
T ss_dssp E-----ECCSSCSEEECCSSCCCEEEC---------------------------CCCSSCCEEECCSSCCCCC--GGGGG
T ss_pred c-----CCCCcceEEECCCCeeeeccc---------------------------cccccccEEECCCCCCccc--HHHcC
Confidence 2 223456666666666543211 0124567777777777643 46777
Q ss_pred CCccceeeccccccCCCCCccccCCCCCCcEEcCCCCCCCcchhccCCCCCCcEEEccCCcccCCCCcccccccccchhc
Q 002069 311 LTNLATLYFSTNALSGSIPNEITNLRSLSDLQLSENTLNGSIPLALGNLTKLVSLDLSINKLSGSIPLSFASLTSLTTLY 390 (973)
Q Consensus 311 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~ 390 (973)
+++|++|++++|.+++..|..|..+++|++|+|++|++++ ++..+..+++|++|+|++|+++ ..|..+..+++|+.|+
T Consensus 247 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~ 324 (390)
T 3o6n_A 247 YPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLY 324 (390)
T ss_dssp CTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEE
T ss_pred CCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEE
Confidence 7778888888887777777777788888888888888874 4556677888888888888887 4566677788888888
Q ss_pred ccccccccCCCcccCCCCCCCEEEccCCCCCC
Q 002069 391 LYENSLCDSIPKEIGDMKSLSILDLSSNKLNG 422 (973)
Q Consensus 391 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 422 (973)
+++|+++.. + +..+++|++|++++|++++
T Consensus 325 L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~ 353 (390)
T 3o6n_A 325 LDHNSIVTL-K--LSTHHTLKNLTLSHNDWDC 353 (390)
T ss_dssp CCSSCCCCC-C--CCTTCCCSEEECCSSCEEH
T ss_pred CCCCcccee-C--chhhccCCEEEcCCCCccc
Confidence 888888664 2 6677888888888888874
No 285
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=6.8e-35 Score=314.04 Aligned_cols=230 Identities=13% Similarity=0.074 Sum_probs=183.8
Q ss_pred cCCcccccccCCCceeEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEEE
Q 002069 701 KNFDDEHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVVY 779 (973)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 779 (973)
++|++.+.||+|+||.||+|... +++.||||++...........+.+.+|+..+++++||||+++++++.+++..|+||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 67999999999999999999664 68999999998765555555688999999999999999999999999999999999
Q ss_pred EecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccCC
Q 002069 780 EYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKLG 859 (973)
Q Consensus 780 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 859 (973)
||+++++|.++++.. ....++.+++.|++.|++|||++ +|+||||||+||+++.++.+||+++|
T Consensus 111 e~~~g~~L~~~l~~~-----~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~-------- 174 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS-----PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA-------- 174 (286)
T ss_dssp ECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC--------
T ss_pred EecCCCCHHHHHhcC-----CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc--------
Confidence 999999999999542 35567899999999999999999 99999999999999999999998553
Q ss_pred CCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCCchhh
Q 002069 860 LSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLPTPLRNV 939 (973)
Q Consensus 860 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 939 (973)
|++ +++.++|||||||++|||+||+.||......... . .................
T Consensus 175 ------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~ 229 (286)
T 3uqc_A 175 ------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGL-----A-PAERDTAGQPIEPADID 229 (286)
T ss_dssp ------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCS-----E-ECCBCTTSCBCCHHHHC
T ss_pred ------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhh-----H-HHHHHhccCCCChhhcc
Confidence 333 3678999999999999999999999754321100 0 00000111111111111
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCCHHHHHHHhc
Q 002069 940 QDKLISIMEVSISCLDESPTSRPTMQKVSQLLK 972 (973)
Q Consensus 940 ~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~L~ 972 (973)
...+..+.+++.+||+.||.+| |++|+++.|+
T Consensus 230 ~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~ 261 (286)
T 3uqc_A 230 RDIPFQISAVAARSVQGDGGIR-SASTLLNLMQ 261 (286)
T ss_dssp TTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHcccCCccC-CHHHHHHHHH
Confidence 1234457899999999999999 9999999875
No 286
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=1.6e-33 Score=311.19 Aligned_cols=304 Identities=24% Similarity=0.310 Sum_probs=228.8
Q ss_pred CCCCCCCCCCcccCCC------CCCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccC
Q 002069 8 SFNQFSGSIPPEIGHL------THLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGN 81 (973)
Q Consensus 8 ~~~~l~~~~p~~~~~l------~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~ 81 (973)
+.+.++ .+|+.+... .+++.+++++|.++ .+|..+. ++|++|++++|++++..|.+|+++++|++|++++
T Consensus 12 ~~~~l~-~lp~~~~~~cp~~c~c~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~ 87 (332)
T 2ft3_A 12 GIPDLD-SLPPTYSAMCPFGCHCHLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVN 87 (332)
T ss_dssp --------------CCCCSSCEEETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CCCccc-cCCCcccCCCCCCCcccCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCC
Confidence 344555 677766544 37899999999998 6777664 6899999999999866677899999999999999
Q ss_pred CcCcccCCccccCccccceeeccCCcCCCCCCCccccCCccceeecccccccccCcccccccCCCCceecccCCCC--CC
Q 002069 82 NLLSGSIPNEVGSLKSLSDLRLSNNSLNGSIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLS--GA 159 (973)
Q Consensus 82 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~--~~ 159 (973)
|++++..|..|+.+++|++|+|++|+++ .+|..+. ++|++|++++|++++..+..|+++++|++|++++|.++ +.
T Consensus 88 n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 164 (332)
T 2ft3_A 88 NKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGF 164 (332)
T ss_dssp SCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGS
T ss_pred CccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCC
Confidence 9998777888999999999999999998 6777665 78999999999998666667899999999999999985 36
Q ss_pred CCccccCccccceeeecccccCCCCCccccccCccceeeccccccccccccccCCCCcccEEecCCcccCCCCCcccccc
Q 002069 160 IPFSLGNLTNLVTLYIGINALSGSIPNEIGNLKSLSDLRLDYNTLSGSILYSFGNLTKLEILYLDVNALSGLIPNEIGNL 239 (973)
Q Consensus 160 ~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l 239 (973)
.|..+..+ +|+.|++++|++++ +|..+. ++|++|++++|+++++.+..|..+++|+.|++++|+++++.+..|..+
T Consensus 165 ~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l 240 (332)
T 2ft3_A 165 EPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFL 240 (332)
T ss_dssp CTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGC
T ss_pred CcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCC
Confidence 67778888 88899999998884 666554 688888888888888887888888888888888888888877788888
Q ss_pred ccccceecccccccCCCCcccCCcchhhhccCCCcccCchhhhhhccccccceEEcccccccCCcCchhhc------CCc
Q 002069 240 KSLLALQLNYNTLSGSIPCSFGNLTKLVISCLGTNALSSSILEEIGNLKSLLHLQLNYNTLSGSIPLSLGS------LTN 313 (973)
Q Consensus 240 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~------l~~ 313 (973)
++|++|++++|+++ .+|.. +..+++|++|++++|++++..+..|.. .+.
T Consensus 241 ~~L~~L~L~~N~l~-~lp~~------------------------l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~ 295 (332)
T 2ft3_A 241 PTLRELHLDNNKLS-RVPAG------------------------LPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAY 295 (332)
T ss_dssp TTCCEEECCSSCCC-BCCTT------------------------GGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCC
T ss_pred CCCCEEECCCCcCe-ecChh------------------------hhcCccCCEEECCCCCCCccChhHcccccccccccc
Confidence 88888888888876 33333 445566666777777766655555543 356
Q ss_pred cceeeccccccC--CCCCccccCCCCCCcEEcCCCC
Q 002069 314 LATLYFSTNALS--GSIPNEITNLRSLSDLQLSENT 347 (973)
Q Consensus 314 L~~L~L~~n~l~--~~~~~~~~~l~~L~~L~L~~N~ 347 (973)
|+.|++++|.+. +..|..|..+++|+.+++++|+
T Consensus 296 l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 296 YNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp BSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred ccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 777888888776 4667777788888888887764
No 287
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=2.7e-33 Score=309.40 Aligned_cols=293 Identities=24% Similarity=0.265 Sum_probs=256.4
Q ss_pred CcEEeCCCCCCCCCCCcccCCCCCCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccC
Q 002069 2 LKVLGLSFNQFSGSIPPEIGHLTHLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGN 81 (973)
Q Consensus 2 l~~L~l~~~~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~ 81 (973)
++.+++++++++ .+|..+. ++|++|+|++|.+++..|..|..+++|++|++++|++++..|..|+++++|++|++++
T Consensus 35 l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 111 (332)
T 2ft3_A 35 LRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISK 111 (332)
T ss_dssp TTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCS
T ss_pred CCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCC
Confidence 688999999998 8998875 7999999999999988888999999999999999999977799999999999999999
Q ss_pred CcCcccCCccccCccccceeeccCCcCCCCCCCccccCCccceeeccccccc--ccCcccccccCCCCceecccCCCCCC
Q 002069 82 NLLSGSIPNEVGSLKSLSDLRLSNNSLNGSIPSSLGNLTNLVTLYLHMNALS--GSIPDEIGNLKFLSDLQVSYNTLSGA 159 (973)
Q Consensus 82 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~--~~~p~~~~~l~~L~~L~l~~N~l~~~ 159 (973)
|+++ .+|..+. ++|++|++++|++++..+..|.++++|++|++++|.++ +..|..+..+ +|++|++++|++++
T Consensus 112 n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~- 186 (332)
T 2ft3_A 112 NHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG- 186 (332)
T ss_dssp SCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-
T ss_pred CcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-
Confidence 9999 7887776 79999999999999655667999999999999999996 3678889998 99999999999994
Q ss_pred CCccccCccccceeeecccccCCCCCccccccCccceeeccccccccccccccCCCCcccEEecCCcccCCCCCcccccc
Q 002069 160 IPFSLGNLTNLVTLYIGINALSGSIPNEIGNLKSLSDLRLDYNTLSGSILYSFGNLTKLEILYLDVNALSGLIPNEIGNL 239 (973)
Q Consensus 160 ~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l 239 (973)
+|..+. ++|++|++++|++++..|..+.++++|++|++++|+++++.+..|..+++|+.|++++|+++.+ |..+..+
T Consensus 187 l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l-p~~l~~l 263 (332)
T 2ft3_A 187 IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSRV-PAGLPDL 263 (332)
T ss_dssp CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCCBC-CTTGGGC
T ss_pred cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCeec-ChhhhcC
Confidence 565554 7999999999999988889999999999999999999999988999999999999999999965 7779999
Q ss_pred ccccceecccccccCCCCcccCCcchhhhccCCCcccCchhhhhhccccccceEEccccccc--CCcCchhhcCCcccee
Q 002069 240 KSLLALQLNYNTLSGSIPCSFGNLTKLVISCLGTNALSSSILEEIGNLKSLLHLQLNYNTLS--GSIPLSLGSLTNLATL 317 (973)
Q Consensus 240 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~--~~~~~~~~~l~~L~~L 317 (973)
++|+.|++++|++++..+..|....- -....+|+.|++++|.+. +..|..|..+++|+.+
T Consensus 264 ~~L~~L~l~~N~l~~~~~~~~~~~~~------------------~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l 325 (332)
T 2ft3_A 264 KLLQVVYLHTNNITKVGVNDFCPVGF------------------GVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAI 325 (332)
T ss_dssp TTCCEEECCSSCCCBCCTTSSSCSSC------------------CSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTE
T ss_pred ccCCEEECCCCCCCccChhHcccccc------------------ccccccccceEeecCcccccccCcccccccchhhhh
Confidence 99999999999999888777764320 012456788888888887 5677888888999999
Q ss_pred eccccc
Q 002069 318 YFSTNA 323 (973)
Q Consensus 318 ~L~~n~ 323 (973)
++++|+
T Consensus 326 ~l~~n~ 331 (332)
T 2ft3_A 326 QFGNYK 331 (332)
T ss_dssp EC----
T ss_pred hccccc
Confidence 988874
No 288
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=8e-34 Score=339.09 Aligned_cols=310 Identities=22% Similarity=0.212 Sum_probs=196.1
Q ss_pred CCCCcEEEccCCcCcccCCccccCccccceeeccCCcCCCCCCCccccCCccceeecccccccccCcccccccCCCCcee
Q 002069 71 LTSLIYIDIGNNLLSGSIPNEVGSLKSLSDLRLSNNSLNGSIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQ 150 (973)
Q Consensus 71 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 150 (973)
+.+++.|++++|.++...+..++.+++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..|..|+++++|++|+
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 34555555555555533333344555555555555555544444555555555555555555554445555555555555
Q ss_pred cccCCCCCCCCccccCccccceeeecccccCCCCCccccccCccceeeccccccccccccccCCCCcccEEecCCcccCC
Q 002069 151 VSYNTLSGAIPFSLGNLTNLVTLYIGINALSGSIPNEIGNLKSLSDLRLDYNTLSGSILYSFGNLTKLEILYLDVNALSG 230 (973)
Q Consensus 151 l~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~ 230 (973)
|++|.+++..+..|+++++|++|++++|.+++..|..|.++++|++|++++|.+++++ ++.+++|+.|++++|.+++
T Consensus 130 L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~ 206 (597)
T 3oja_B 130 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLST 206 (597)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSE
T ss_pred eeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCcccc
Confidence 5555555444444555555555555555555555555566666666666666655442 3445566666666665543
Q ss_pred CCCccccccccccceecccccccCCCCcccCCcchhhhccCCCcccCchhhhhhccccccceEEcccccccCCcCchhhc
Q 002069 231 LIPNEIGNLKSLLALQLNYNTLSGSIPCSFGNLTKLVISCLGTNALSSSILEEIGNLKSLLHLQLNYNTLSGSIPLSLGS 310 (973)
Q Consensus 231 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 310 (973)
+ ...++|+.|++++|.++...+.. .++|+.|++++|.+++ +..++.
T Consensus 207 l-----~~~~~L~~L~ls~n~l~~~~~~~---------------------------~~~L~~L~L~~n~l~~--~~~l~~ 252 (597)
T 3oja_B 207 L-----AIPIAVEELDASHNSINVVRGPV---------------------------NVELTILKLQHNNLTD--TAWLLN 252 (597)
T ss_dssp E-----ECCTTCSEEECCSSCCCEEECSC---------------------------CSCCCEEECCSSCCCC--CGGGGG
T ss_pred c-----cCCchhheeeccCCccccccccc---------------------------CCCCCEEECCCCCCCC--Chhhcc
Confidence 2 23345666666666665322110 1367777777777774 356777
Q ss_pred CCccceeeccccccCCCCCccccCCCCCCcEEcCCCCCCCcchhccCCCCCCcEEEccCCcccCCCCcccccccccchhc
Q 002069 311 LTNLATLYFSTNALSGSIPNEITNLRSLSDLQLSENTLNGSIPLALGNLTKLVSLDLSINKLSGSIPLSFASLTSLTTLY 390 (973)
Q Consensus 311 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~ 390 (973)
+++|+.|+|++|.+++..|..|..+++|+.|+|++|.+++ +|..+..+++|+.|+|++|.++ .+|..+..+++|+.|+
T Consensus 253 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~ 330 (597)
T 3oja_B 253 YPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLY 330 (597)
T ss_dssp CTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEE
T ss_pred CCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEE
Confidence 8888888888888877777788888888888888888874 4666677888888888888888 4666777788888888
Q ss_pred ccccccccCCCcccCCCCCCCEEEccCCCCCC
Q 002069 391 LYENSLCDSIPKEIGDMKSLSILDLSSNKLNG 422 (973)
Q Consensus 391 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 422 (973)
|++|.+++. .+..+++|+.|+|++|.+.+
T Consensus 331 L~~N~l~~~---~~~~~~~L~~L~l~~N~~~~ 359 (597)
T 3oja_B 331 LDHNSIVTL---KLSTHHTLKNLTLSHNDWDC 359 (597)
T ss_dssp CCSSCCCCC---CCCTTCCCSEEECCSSCEEH
T ss_pred CCCCCCCCc---ChhhcCCCCEEEeeCCCCCC
Confidence 888888664 26667788888888888764
No 289
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=5.7e-34 Score=309.98 Aligned_cols=232 Identities=20% Similarity=0.256 Sum_probs=179.8
Q ss_pred hcCCccc-ccccCCCceeEEEEEc-CCCCEEEEEEcCCCCCcchhhHHHHHHHHHHh-hcCCCCceeeeceeeec----c
Q 002069 700 TKNFDDE-HCIGNGGQGSVYKAEL-PTGEIVAVKKFHSPLPGEMACQQEFLNEGNAL-TKIRHRNIVKFYGFCSH----A 772 (973)
Q Consensus 700 ~~~~~~~-~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~~~~~~~~----~ 772 (973)
.++|.+. +.||+|+||.||+|.. .+++.||+|++.. ...+.+|+.++ +..+||||+++++++.. .
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~--------~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~ 87 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIVRIVDVYENLYAGR 87 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC--------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc--------cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCC
Confidence 3567777 7799999999999965 5889999999863 24566788877 55699999999999876 6
Q ss_pred ceeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecC---CCceEEec
Q 002069 773 LHSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNL---EYEAHVSD 849 (973)
Q Consensus 773 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~---~~~~kl~D 849 (973)
...++||||+++++|.+++.... ...+++.+++.++.|++.|++|||+. +|+||||||+||+++. ++.+||+|
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~D 163 (299)
T 3m2w_A 88 KCLLIVMECLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTD 163 (299)
T ss_dssp EEEEEEECCCCSCBHHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECC
T ss_pred ceEEEEEeecCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEec
Confidence 77899999999999999997643 23689999999999999999999999 9999999999999998 78999999
Q ss_pred ccccccccCCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcC
Q 002069 850 FGISKFLKLGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLD 929 (973)
Q Consensus 850 fg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 929 (973)
||++.... +..++.++||||+||++|||++|+.||......... .........
T Consensus 164 fg~a~~~~----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~-----~~~~~~~~~ 216 (299)
T 3m2w_A 164 FGFAKETT----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS-----PGMKTRIRM 216 (299)
T ss_dssp CTTCEECT----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC------------CCSCCSSCT
T ss_pred cccccccc----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh-----HHHHHHHhh
Confidence 99986543 134677899999999999999999999743321100 000111111
Q ss_pred CCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 002069 930 PRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQL 970 (973)
Q Consensus 930 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~~ 970 (973)
.....+.......+..+.+++.+||+.||.+|||++|+++.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 217 GQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp TCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 11111111112234568899999999999999999999874
No 290
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=4.4e-33 Score=307.59 Aligned_cols=289 Identities=22% Similarity=0.259 Sum_probs=162.1
Q ss_pred CCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCcccCCccccCccccceeecc
Q 002069 25 HLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSLSDLRLS 104 (973)
Q Consensus 25 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~ 104 (973)
++++++++++.++ .+|..+. ++|++|++++|++++..+..|+++++|++|+|++|++++..|..|+.+++|++|+|+
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 4555555555554 3444332 455555555555554333455555555555555555554445555555555555555
Q ss_pred CCcCCCCCCCccccCCccceeecccccccccCcccccccCCCCceecccCCCCC--CCCccccCccccceeeecccccCC
Q 002069 105 NNSLNGSIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSG--AIPFSLGNLTNLVTLYIGINALSG 182 (973)
Q Consensus 105 ~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~p~~l~~l~~L~~L~l~~n~l~~ 182 (973)
+|+++ .+|..+. ++|++|++++|++++..+..|.++++|++|++++|.++. ..+..+.++++|+.|++++|.++
T Consensus 109 ~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~- 184 (330)
T 1xku_A 109 KNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT- 184 (330)
T ss_dssp SSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-
T ss_pred CCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-
Confidence 55555 3444443 455555555555554444445555555555555555532 34445555555555555555555
Q ss_pred CCCccccccCccceeeccccccccccccccCCCCcccEEecCCcccCCCCCccccccccccceecccccccCCCCcccCC
Q 002069 183 SIPNEIGNLKSLSDLRLDYNTLSGSILYSFGNLTKLEILYLDVNALSGLIPNEIGNLKSLLALQLNYNTLSGSIPCSFGN 262 (973)
Q Consensus 183 ~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 262 (973)
.+|..+. ++|++|++++|+++++.+..|.++++|+.|++++|.++++.+..|..+++|++|++++|+++ .+|..+..
T Consensus 185 ~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~ 261 (330)
T 1xku_A 185 TIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLAD 261 (330)
T ss_dssp SCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTT
T ss_pred cCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhcc
Confidence 3443333 45555555555555555555555555555555555555554455555555555555555555 34444555
Q ss_pred cchhhhccCCCcccCchhhhhhcc------ccccceEEcccccccC--CcCchhhcCCccceeeccccc
Q 002069 263 LTKLVISCLGTNALSSSILEEIGN------LKSLLHLQLNYNTLSG--SIPLSLGSLTNLATLYFSTNA 323 (973)
Q Consensus 263 l~~L~~l~l~~n~i~~~~~~~~~~------l~~L~~L~l~~n~l~~--~~~~~~~~l~~L~~L~L~~n~ 323 (973)
+++|+.+++++|.++.+....|.. .++++.|++++|.+.. ..|..|..++.++.+++++|+
T Consensus 262 l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 262 HKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp CSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred CCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 555555555555555555555433 3678899999998864 567889999999999999885
No 291
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.5e-34 Score=346.86 Aligned_cols=235 Identities=24% Similarity=0.322 Sum_probs=190.3
Q ss_pred hcCCcccccccCCCceeEEEEEcC--CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeeeccce---
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELP--TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCSHALH--- 774 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~--- 774 (973)
.++|++.+.||+|+||+||+|... +++.||||++.... .......+.+|+.++++++||||+++++++...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~ 156 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSG--DAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGD 156 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSC--CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSC
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccC--CHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCC
Confidence 368999999999999999999664 68999999987532 23446788999999999999999999999987655
Q ss_pred --eEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccc
Q 002069 775 --SFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGI 852 (973)
Q Consensus 775 --~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~ 852 (973)
.|+||||+++++|.+++.. .+++.+++.++.||+.||+|||++ +|+||||||+||+++.+ .+||+|||+
T Consensus 157 ~~~~lv~E~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~ 227 (681)
T 2pzi_A 157 PVGYIVMEYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGA 227 (681)
T ss_dssp EEEEEEEECCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTT
T ss_pred ceeEEEEEeCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEeccc
Confidence 6999999999999987753 589999999999999999999999 99999999999999975 999999999
Q ss_pred cccccCCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCC
Q 002069 853 SKFLKLGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRL 932 (973)
Q Consensus 853 a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 932 (973)
++..... ....||+.|+|||++.+.. +.++|||||||++|+|++|..||..... ..+
T Consensus 228 a~~~~~~----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~------------------~~~ 284 (681)
T 2pzi_A 228 VSRINSF----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYV------------------DGL 284 (681)
T ss_dssp CEETTCC----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEEC------------------SSC
T ss_pred chhcccC----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccc------------------ccc
Confidence 9876543 4467999999999987654 8899999999999999999988762110 001
Q ss_pred CCCchhhHHHHHHHHHHHhcccCCCCCCCCCH-HHHHH
Q 002069 933 PTPLRNVQDKLISIMEVSISCLDESPTSRPTM-QKVSQ 969 (973)
Q Consensus 933 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-~ev~~ 969 (973)
+. ..........+.+++.+||+.||.+||+. +++.+
T Consensus 285 ~~-~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~ 321 (681)
T 2pzi_A 285 PE-DDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSA 321 (681)
T ss_dssp CT-TCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred cc-cccccccCHHHHHHHhhhccCChhhCCCHHHHHHH
Confidence 11 11122334568899999999999999964 44444
No 292
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=3.6e-34 Score=325.43 Aligned_cols=245 Identities=13% Similarity=0.089 Sum_probs=181.7
Q ss_pred hcCCcccccccCCCceeEEEEE-cCCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCC-Cceeeec-----------
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAE-LPTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRH-RNIVKFY----------- 766 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~~~----------- 766 (973)
...|...+.||+|+||+||+|. ..+|+.||||++...........+.+.+|+.+++.++| ++.....
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 3567888999999999999996 55899999999885444433445789999999999977 3221111
Q ss_pred ----------eeeec-----cceeEEEEEecCCCChHHHhccC----ccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCe
Q 002069 767 ----------GFCSH-----ALHSFVVYEYLEMGSLAMILSND----AAAEEFGWTKRMNAIKGVADALLYMHTNCFPPI 827 (973)
Q Consensus 767 ----------~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i 827 (973)
.++.. ....+++|+++ +++|.++++.. .....+++..++.++.|++.||+|||++ +|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 232 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 232 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Cc
Confidence 11111 12346677755 68999988421 1234577889999999999999999999 99
Q ss_pred EeecCCCCCeeecCCCceEEecccccccccCCCCcccccccccCccccccc----------ccCCCCCccchHHHHHHHH
Q 002069 828 VHRDISSKNVLLNLEYEAHVSDFGISKFLKLGLSNRTELAGTFGYIAPELA----------YTMKVTEKCDVYSFGVLAL 897 (973)
Q Consensus 828 ~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~----------~~~~~~~~~Dv~slG~~l~ 897 (973)
+||||||+||+++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++|||||||++|
T Consensus 233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~---~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ 308 (413)
T 3dzo_A 233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS---AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIY 308 (413)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTEE---ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHH
T ss_pred ccCCcccceEEEecCCeEEEEeccceeecCCc---cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHH
Confidence 99999999999999999999999998865432 344567 999999998 5556888999999999999
Q ss_pred HHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCCchhhHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 002069 898 EVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLPTPLRNVQDKLISIMEVSISCLDESPTSRPTMQKVSQ 969 (973)
Q Consensus 898 el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev~~ 969 (973)
||++|+.||...... ......+.... ..+..+.+++.+||+.||++||++.++++
T Consensus 309 elltg~~Pf~~~~~~---------~~~~~~~~~~~--------~~~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 309 WIWCADLPNTDDAAL---------GGSEWIFRSCK--------NIPQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp HHHHSSCCCCTTGGG---------SCSGGGGSSCC--------CCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHCCCCCCCcchh---------hhHHHHHhhcc--------cCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 999999999743321 11111111110 11245788999999999999999988865
No 293
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=3.2e-34 Score=313.32 Aligned_cols=249 Identities=33% Similarity=0.512 Sum_probs=201.0
Q ss_pred CCCCEEECCCCcccc--cCCcCccCCCCCCeeeccC-CcCCCCCCCcccCCCCCcEEEccCCcCcccCCccccCccccce
Q 002069 24 THLKLLSFSKNQLSG--LIPHEIGRLSSLNGLSLYS-NFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSLSD 100 (973)
Q Consensus 24 ~~L~~L~l~~n~l~~--~~p~~~~~l~~L~~L~l~~-n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~ 100 (973)
.++++|+|++|.+++ .+|..|+++++|++|++++ |.+.+.+|..|+++++|++|+|++|++++.+|..++.+++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 567888888888877 7788888888888888884 7777778888888888888888888887778888888888888
Q ss_pred eeccCCcCCCCCCCccccCCccceeecccccccccCcccccccC-CCCceecccCCCCCCCCccccCccccceeeecccc
Q 002069 101 LRLSNNSLNGSIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLK-FLSDLQVSYNTLSGAIPFSLGNLTNLVTLYIGINA 179 (973)
Q Consensus 101 L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~ 179 (973)
|+|++|++++.+|..++++++|++|+|++|++++.+|..+++++ +|++|++++|++++..|..+..++ |+.|++++|+
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~ 208 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNM 208 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCc
Confidence 88888888877888888888888888888888777888888887 888888888888777787887776 8888888888
Q ss_pred cCCCCCccccccCccceeeccccccccccccccCCCCcccEEecCCcccCCCCCccccccccccceecccccccCCCCcc
Q 002069 180 LSGSIPNEIGNLKSLSDLRLDYNTLSGSILYSFGNLTKLEILYLDVNALSGLIPNEIGNLKSLLALQLNYNTLSGSIPCS 259 (973)
Q Consensus 180 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 259 (973)
+++..|..+..+++|++|++++|++++..+. +..+++|++|++++|++++..|..|..+++|+.|+|++|++++.+|..
T Consensus 209 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~ 287 (313)
T 1ogq_A 209 LEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG 287 (313)
T ss_dssp EEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS
T ss_pred ccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC
Confidence 8877788888888888888888888765554 777888888888888888777888888888888888888888777765
Q ss_pred cCCcchhhhccCCCcc
Q 002069 260 FGNLTKLVISCLGTNA 275 (973)
Q Consensus 260 ~~~l~~L~~l~l~~n~ 275 (973)
+.+++|+.+++.+|.
T Consensus 288 -~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 288 -GNLQRFDVSAYANNK 302 (313)
T ss_dssp -TTGGGSCGGGTCSSS
T ss_pred -ccccccChHHhcCCC
Confidence 778888888888776
No 294
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=1.5e-32 Score=303.23 Aligned_cols=289 Identities=21% Similarity=0.254 Sum_probs=186.9
Q ss_pred CCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCcccCCccccCccccceeeccCCcCCCCCCCccccCCccceeecc
Q 002069 49 SLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSLSDLRLSNNSLNGSIPSSLGNLTNLVTLYLH 128 (973)
Q Consensus 49 ~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 128 (973)
+|+.++++++.++ .+|..+. ++|++|++++|++++..+..|+.+++|++|+|++|++++..|..|+++++|++|+|+
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 5667777777766 5665543 466777777777765444566667777777777777765556667777777777777
Q ss_pred cccccccCcccccccCCCCceecccCCCCCCCCccccCccccceeeecccccCC--CCCccccccCccceeecccccccc
Q 002069 129 MNALSGSIPDEIGNLKFLSDLQVSYNTLSGAIPFSLGNLTNLVTLYIGINALSG--SIPNEIGNLKSLSDLRLDYNTLSG 206 (973)
Q Consensus 129 ~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~--~~p~~~~~l~~L~~L~L~~N~l~~ 206 (973)
+|+++ .+|..+. ++|++|++++|.+++..+..|.++++|+.|++++|.++. ..+..+.++++|++|++++|+++.
T Consensus 109 ~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~ 185 (330)
T 1xku_A 109 KNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT 185 (330)
T ss_dssp SSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS
T ss_pred CCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc
Confidence 77766 4555443 567777777777765555666677777777777776642 455666667777777777777665
Q ss_pred ccccccCCCCcccEEecCCcccCCCCCccccccccccceecccccccCCCCcccCCcchhhhccCCCcccCchhhhhhcc
Q 002069 207 SILYSFGNLTKLEILYLDVNALSGLIPNEIGNLKSLLALQLNYNTLSGSIPCSFGNLTKLVISCLGTNALSSSILEEIGN 286 (973)
Q Consensus 207 ~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~n~i~~~~~~~~~~ 286 (973)
++...+ ++|++|++++|+++++.+..|.++++|+.|++++|.+++..+..|..+++|+.|++++|.++.+ +..+..
T Consensus 186 l~~~~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l-p~~l~~ 261 (330)
T 1xku_A 186 IPQGLP---PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKV-PGGLAD 261 (330)
T ss_dssp CCSSCC---TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSSC-CTTTTT
T ss_pred CCcccc---ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCccC-Chhhcc
Confidence 443322 5677777777777666666677777777777777777666666666777777777777776633 345666
Q ss_pred ccccceEEcccccccCCcCchhhc------CCccceeeccccccCC--CCCccccCCCCCCcEEcCCCC
Q 002069 287 LKSLLHLQLNYNTLSGSIPLSLGS------LTNLATLYFSTNALSG--SIPNEITNLRSLSDLQLSENT 347 (973)
Q Consensus 287 l~~L~~L~l~~n~l~~~~~~~~~~------l~~L~~L~L~~n~l~~--~~~~~~~~l~~L~~L~L~~N~ 347 (973)
+++|++|++++|++++..+..|.. .+.++.|++++|.+.. ..|..|..+.+++.++|++|+
T Consensus 262 l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 262 HKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp CSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred CCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 677777777777776655555543 2566667777776643 455666666777777776663
No 295
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=3.2e-34 Score=317.58 Aligned_cols=245 Identities=16% Similarity=0.124 Sum_probs=186.2
Q ss_pred hcCCcccccccCCCceeEEEEEcCCCCEEEEEEcCCCCCc-----chhhHHHHHHHHHHhhcCC----------------
Q 002069 700 TKNFDDEHCIGNGGQGSVYKAELPTGEIVAVKKFHSPLPG-----EMACQQEFLNEGNALTKIR---------------- 758 (973)
Q Consensus 700 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~~e~~~l~~l~---------------- 758 (973)
.++|++.+.||+|+||+||+|+. +|+.||||++...... .....+.+.+|+.+++.++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 46799999999999999999987 7899999999754321 2223477888888888775
Q ss_pred ----------CCceeeeceeeec-------------cceeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHH
Q 002069 759 ----------HRNIVKFYGFCSH-------------ALHSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADA 815 (973)
Q Consensus 759 ----------h~niv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~ 815 (973)
||||+++++++.+ .+..++||||+++|++.+.+.+ ..+++.+++.++.||+.|
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~----~~~~~~~~~~i~~qi~~a 173 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT----KLSSLATAKSILHQLTAS 173 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT----TCCCHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh----cCCCHHHHHHHHHHHHHH
Confidence 5555555555544 6789999999999977666643 357899999999999999
Q ss_pred HHHHh-hCCCCCeEeecCCCCCeeecCCC--------------------ceEEecccccccccCCCCcccccccccCccc
Q 002069 816 LLYMH-TNCFPPIVHRDISSKNVLLNLEY--------------------EAHVSDFGISKFLKLGLSNRTELAGTFGYIA 874 (973)
Q Consensus 816 l~~LH-~~~~~~i~H~Dlk~~Nill~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~a 874 (973)
|+||| +. +|+||||||+|||++.++ .+||+|||+|+..... ...||+.|+|
T Consensus 174 L~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-----~~~gt~~y~a 245 (336)
T 2vuw_A 174 LAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-----IVVFCDVSMD 245 (336)
T ss_dssp HHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-----EEECCCCTTC
T ss_pred HHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-----cEEEeecccC
Confidence 99999 88 999999999999999887 8999999999876532 3479999999
Q ss_pred ccccccCCCCCccchHHHHHH-HHHHHhCCCCCcchhhhhhhhhhhhhhhhhhhcCCCCCCCchhhHHHHHHHHHHHhcc
Q 002069 875 PELAYTMKVTEKCDVYSFGVL-ALEVIKGKHPRDFISSICSSLSSNLNIALDEMLDPRLPTPLRNVQDKLISIMEVSISC 953 (973)
Q Consensus 875 PE~~~~~~~~~~~Dv~slG~~-l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 953 (973)
||++.+.. +.++||||+|++ .+++++|..||...... ........... ..............+..+.+++.+|
T Consensus 246 PE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~s~~~~dli~~~ 319 (336)
T 2vuw_A 246 EDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWL----HYLTDKMLKQM-TFKTKCNTPAMKQIKRKIQEFHRTM 319 (336)
T ss_dssp SGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHH----HHHHHHHHHTC-CCSSCCCSHHHHHHHHHHHHHHHHG
T ss_pred hhhhcCCC-ccceehhhhhCCCCcccccccCCCcchhhh----hHHHHhhhhhh-ccCcccchhhhhhcCHHHHHHHHHH
Confidence 99998776 889999998777 78888999998632110 00011111111 1111122223345677899999999
Q ss_pred cCCCCCCCCCHHHHH
Q 002069 954 LDESPTSRPTMQKVS 968 (973)
Q Consensus 954 l~~dP~~RPs~~ev~ 968 (973)
|+.| |++|++
T Consensus 320 L~~d-----sa~e~l 329 (336)
T 2vuw_A 320 LNFS-----SATDLL 329 (336)
T ss_dssp GGSS-----SHHHHH
T ss_pred hccC-----CHHHHH
Confidence 9976 999998
No 296
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.9e-33 Score=307.07 Aligned_cols=246 Identities=29% Similarity=0.465 Sum_probs=122.5
Q ss_pred cEEeCCCCCCCC--CCCcccCCCCCCCEEECCC-CcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEc
Q 002069 3 KVLGLSFNQFSG--SIPPEIGHLTHLKLLSFSK-NQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDI 79 (973)
Q Consensus 3 ~~L~l~~~~l~~--~~p~~~~~l~~L~~L~l~~-n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l 79 (973)
+.|+|++|+++| .+|+.++.+++|++|+|++ |.+.+.+|..|+.+++|++|+|++|++++.+|..|+++++|++|++
T Consensus 53 ~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 132 (313)
T 1ogq_A 53 NNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDF 132 (313)
T ss_dssp EEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEEC
T ss_pred EEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeC
Confidence 445555555544 4555555555555555552 4444444555555555555555555554444555555555555555
Q ss_pred cCCcCcccCCccccCccccceeeccCCcCCCCCCCccccCC-ccceeecccccccccCcccccccCCCCceecccCCCCC
Q 002069 80 GNNLLSGSIPNEVGSLKSLSDLRLSNNSLNGSIPSSLGNLT-NLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSG 158 (973)
Q Consensus 80 ~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~-~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 158 (973)
++|++++.+|..++.+++|++|+|++|++++.+|..++.++ +|++|++++|++++..|..|+.++ |++|++++|.+++
T Consensus 133 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~ 211 (313)
T 1ogq_A 133 SYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEG 211 (313)
T ss_dssp CSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEE
T ss_pred CCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccC
Confidence 55555444455555555555555555555444455555544 455555555555444455555444 5555555555544
Q ss_pred CCCccccCccccceeeecccccCCCCCccccccCccceeeccccccccccccccCCCCcccEEecCCcccCCCCCccccc
Q 002069 159 AIPFSLGNLTNLVTLYIGINALSGSIPNEIGNLKSLSDLRLDYNTLSGSILYSFGNLTKLEILYLDVNALSGLIPNEIGN 238 (973)
Q Consensus 159 ~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~ 238 (973)
..|..|..+++|+.|++++|++++.+|. +..+++|++|++++|++++..+..|..+++|+.|++++|++++..|.. ..
T Consensus 212 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~ 289 (313)
T 1ogq_A 212 DASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GN 289 (313)
T ss_dssp CCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TT
T ss_pred cCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-cc
Confidence 4444455555555555555555433332 444455555555555554444444555555555555555554443433 44
Q ss_pred cccccceeccccc
Q 002069 239 LKSLLALQLNYNT 251 (973)
Q Consensus 239 l~~L~~L~L~~N~ 251 (973)
+++|+.|++++|+
T Consensus 290 l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 290 LQRFDVSAYANNK 302 (313)
T ss_dssp GGGSCGGGTCSSS
T ss_pred ccccChHHhcCCC
Confidence 4555555555554
No 297
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.98 E-value=5.7e-36 Score=347.56 Aligned_cols=381 Identities=23% Similarity=0.159 Sum_probs=208.4
Q ss_pred ccccceeeecccccCCCCCcc-ccccCccceeeccccccccc----cccccCCCCcccEEecCCcccCCCCCccc-cccc
Q 002069 167 LTNLVTLYIGINALSGSIPNE-IGNLKSLSDLRLDYNTLSGS----ILYSFGNLTKLEILYLDVNALSGLIPNEI-GNLK 240 (973)
Q Consensus 167 l~~L~~L~l~~n~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~n~i~~~~~~~~-~~l~ 240 (973)
+++|++|++++|+++...... +..+++|++|++++|+++.. .+..+..+++|++|++++|.+++..+..+ ..++
T Consensus 2 ~~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~ 81 (461)
T 1z7x_W 2 SLDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQ 81 (461)
T ss_dssp CEEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTC
T ss_pred CccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHh
Confidence 356788888888877433222 66778888888888887743 23456667788888888887765333333 2344
Q ss_pred ----cccceecccccccCCCCcccCCcchhhhccCCCcccCchhhhhhccccccceEEcccccccCCcCchhhc-----C
Q 002069 241 ----SLLALQLNYNTLSGSIPCSFGNLTKLVISCLGTNALSSSILEEIGNLKSLLHLQLNYNTLSGSIPLSLGS-----L 311 (973)
Q Consensus 241 ----~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~-----l 311 (973)
+|++|+|++|+++.... ...+..+..+++|++|++++|.+++..+..+.. .
T Consensus 82 ~~~~~L~~L~L~~n~i~~~~~--------------------~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~ 141 (461)
T 1z7x_W 82 TPSCKIQKLSLQNCCLTGAGC--------------------GVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQ 141 (461)
T ss_dssp STTCCCCEEECTTSCCBGGGH--------------------HHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTT
T ss_pred hCCCceeEEEccCCCCCHHHH--------------------HHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCC
Confidence 57777777777653110 012344445555555555555554332222221 3
Q ss_pred CccceeeccccccCCCC----CccccCCCCCCcEEcCCCCCCCcchhccC-----CCCCCcEEEccCCcccCC----CCc
Q 002069 312 TNLATLYFSTNALSGSI----PNEITNLRSLSDLQLSENTLNGSIPLALG-----NLTKLVSLDLSINKLSGS----IPL 378 (973)
Q Consensus 312 ~~L~~L~L~~n~l~~~~----~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-----~l~~L~~L~Ls~N~i~~~----~~~ 378 (973)
++|++|++++|.+++.. +..+..+++|++|++++|.+++..+..+. ..++|++|++++|.+++. .+.
T Consensus 142 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~ 221 (461)
T 1z7x_W 142 CRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCG 221 (461)
T ss_dssp CCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHH
T ss_pred CcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHH
Confidence 34555555555555322 33344455555555555555433333322 234566666666655542 244
Q ss_pred ccccccccchhcccccccccCC-----CcccCCCCCCCEEEccCCCCCCC----cchhhhhhcccceEEEeeCccccccc
Q 002069 379 SFASLTSLTTLYLYENSLCDSI-----PKEIGDMKSLSILDLSSNKLNGS----IPLSLANLTNSLKVLYLSSNHIVGEI 449 (973)
Q Consensus 379 ~~~~l~~L~~L~L~~N~l~~~~-----~~~~~~l~~L~~L~Ls~N~l~~~----~~~~~~~~~~~L~~L~L~~n~l~~~~ 449 (973)
.+..+++|++|++++|++++.. +..+..+++|++|++++|++++. ++..+... ++|++|++++|.+++..
T Consensus 222 ~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~-~~L~~L~Ls~n~i~~~~ 300 (461)
T 1z7x_W 222 IVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAK-ESLKELSLAGNELGDEG 300 (461)
T ss_dssp HHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHC-TTCCEEECTTCCCHHHH
T ss_pred HHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhC-CCcceEECCCCCCchHH
Confidence 4445555666666666554322 22223456666666666666532 23333332 25666666666665433
Q ss_pred CCCCC-----CCcccceeeccCCccCCC----CCcccccccccccccccccccccccCccccc-----cccccEEeecCc
Q 002069 450 PLGHG-----KFSSLIQLILNNNELSGQ----LSPELGSLNQLEYLDLSANTFHNSIPESLGN-----LVKLHYLNLSNN 515 (973)
Q Consensus 450 ~~~~~-----~~~~L~~L~l~~N~l~~~----~~~~l~~l~~L~~L~Ls~N~i~~~~~~~l~~-----l~~L~~L~L~~N 515 (973)
+..+. ..++|++|++++|.+++. ++..+..+++|++|++++|.+++..+..+.. .++|++|+|++|
T Consensus 301 ~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n 380 (461)
T 1z7x_W 301 ARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADC 380 (461)
T ss_dssp HHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTS
T ss_pred HHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCC
Confidence 32221 124666666666666543 3444555677777777777776554444432 456777777777
Q ss_pred cCCC----CCCcccccccccCeecccccccCCCcchhhcc-----cccccccccccccccCc
Q 002069 516 QFSQ----KIPNPIEKLIHLSELDLSYKIFGEEIPSQVCS-----MQSLEKLNLSHNNLSGS 568 (973)
Q Consensus 516 ~l~~----~~~~~~~~l~~L~~L~ls~n~i~~~~~~~~~~-----l~~L~~L~L~~N~l~~~ 568 (973)
++++ .++..+..+++|++|++++|.|++.+...+.. ...|+.|++.++.+...
T Consensus 381 ~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~~~~~l~~~l~~~~~~L~~L~~~~~~~~~~ 442 (461)
T 1z7x_W 381 DVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSEE 442 (461)
T ss_dssp CCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCCHH
T ss_pred CCChhhHHHHHHHHHhCCCccEEECCCCCCCHHHHHHHHHHhccCCcchhheeecccccCHH
Confidence 7765 45555666667777777777666554444331 12355555555554433
No 298
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=1.5e-35 Score=343.98 Aligned_cols=355 Identities=19% Similarity=0.172 Sum_probs=191.4
Q ss_pred CCCCeeeccCCcCCCCCCC-cccCCCCCcEEEccCCcCcc----cCCccccCccccceeeccCCcCCCCCCCcc-ccCC-
Q 002069 48 SSLNGLSLYSNFLKGSIPP-SLGNLTSLIYIDIGNNLLSG----SIPNEVGSLKSLSDLRLSNNSLNGSIPSSL-GNLT- 120 (973)
Q Consensus 48 ~~L~~L~l~~n~~~~~~p~-~~~~l~~L~~L~l~~n~l~~----~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~-~~l~- 120 (973)
++|++|++++|+++..... .+..+++|++|++++|.++. .+|..+..+++|++|+|++|++....+..+ ..++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 4577788887777632222 26667778888888877763 345566667777777777777764323222 2244
Q ss_pred ---ccceeecccccccc----cCcccccccCCCCceecccCCCCCCCCcccc-----CccccceeeecccccCCCC----
Q 002069 121 ---NLVTLYLHMNALSG----SIPDEIGNLKFLSDLQVSYNTLSGAIPFSLG-----NLTNLVTLYIGINALSGSI---- 184 (973)
Q Consensus 121 ---~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~-----~l~~L~~L~l~~n~l~~~~---- 184 (973)
+|++|+|++|+++. .+|..+.++++|++|++++|.+++..+..+. ..++|++|++++|++++..
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 162 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL 162 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHH
Confidence 57777777777763 3466677777777777777776543332222 2345666777666666422
Q ss_pred CccccccCccceeeccccccccccccccC-----CCCcccEEecCCcccCCC----CCccccccccccceecccccccCC
Q 002069 185 PNEIGNLKSLSDLRLDYNTLSGSILYSFG-----NLTKLEILYLDVNALSGL----IPNEIGNLKSLLALQLNYNTLSGS 255 (973)
Q Consensus 185 p~~~~~l~~L~~L~L~~N~l~~~~~~~~~-----~l~~L~~L~L~~n~i~~~----~~~~~~~l~~L~~L~L~~N~l~~~ 255 (973)
+..+..+++|++|++++|.+....+..+. .+++|++|++++|.+++. .+..+..+++|++|++++|.++..
T Consensus 163 ~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~ 242 (461)
T 1z7x_W 163 ASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDV 242 (461)
T ss_dssp HHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHH
T ss_pred HHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChH
Confidence 44455556666666666666544433332 244666666666666543 234444555555555555555321
Q ss_pred CCcccCCcchhhhccCCCcccCchhhhhhccccccceEEcccccccCC----cCchhhcCCccceeeccccccCCCCCcc
Q 002069 256 IPCSFGNLTKLVISCLGTNALSSSILEEIGNLKSLLHLQLNYNTLSGS----IPLSLGSLTNLATLYFSTNALSGSIPNE 331 (973)
Q Consensus 256 ~~~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 331 (973)
... .+....+..+++|++|++++|.+++. ++..+..+++|++|++++|.+++..+..
T Consensus 243 ~~~-------------------~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~ 303 (461)
T 1z7x_W 243 GMA-------------------ELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARL 303 (461)
T ss_dssp HHH-------------------HHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHH
T ss_pred HHH-------------------HHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHH
Confidence 100 00112222455666666666665532 3444455556666666666554332222
Q ss_pred ccC-----CCCCCcEEcCCCCCCCc----chhccCCCCCCcEEEccCCcccCCCCccccc-----ccccchhcccccccc
Q 002069 332 ITN-----LRSLSDLQLSENTLNGS----IPLALGNLTKLVSLDLSINKLSGSIPLSFAS-----LTSLTTLYLYENSLC 397 (973)
Q Consensus 332 ~~~-----l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~-----l~~L~~L~L~~N~l~ 397 (973)
+.. .++|++|++++|.+++. ++..+..+++|++|+|++|++++..+..+.. .++|++|++++|+++
T Consensus 304 l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~ 383 (461)
T 1z7x_W 304 LCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVS 383 (461)
T ss_dssp HHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCC
T ss_pred HHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCC
Confidence 222 14555566665555543 2344445555555565555555433333322 334555555555444
Q ss_pred c----CCCcccCCCCCCCEEEccCCCCC
Q 002069 398 D----SIPKEIGDMKSLSILDLSSNKLN 421 (973)
Q Consensus 398 ~----~~~~~~~~l~~L~~L~Ls~N~l~ 421 (973)
+ .++..+..+++|++|++++|+++
T Consensus 384 ~~~~~~l~~~l~~~~~L~~L~l~~N~i~ 411 (461)
T 1z7x_W 384 DSSCSSLAATLLANHSLRELDLSNNCLG 411 (461)
T ss_dssp HHHHHHHHHHHHHCCCCCEEECCSSSCC
T ss_pred hhhHHHHHHHHHhCCCccEEECCCCCCC
Confidence 3 33444444455555555555544
No 299
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=3.8e-30 Score=280.81 Aligned_cols=248 Identities=23% Similarity=0.249 Sum_probs=208.1
Q ss_pred cEEeCCCCCCCCCCCcccCCCCCCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCC--CCCCcccCCCCCcEEEcc
Q 002069 3 KVLGLSFNQFSGSIPPEIGHLTHLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKG--SIPPSLGNLTSLIYIDIG 80 (973)
Q Consensus 3 ~~L~l~~~~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~--~~p~~~~~l~~L~~L~l~ 80 (973)
+.++.++++++ .+|..+. ++|++|+|++|++++..+..|..+++|++|+|++|+++. ..|..+..+++|++|+++
T Consensus 10 ~~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls 86 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86 (306)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECC
T ss_pred CEEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECC
Confidence 46788888887 7888654 689999999999985444457889999999999999872 236777788999999999
Q ss_pred CCcCcccCCccccCccccceeeccCCcCCCCCC-CccccCCccceeecccccccccCcccccccCCCCceecccCCCCC-
Q 002069 81 NNLLSGSIPNEVGSLKSLSDLRLSNNSLNGSIP-SSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSG- 158 (973)
Q Consensus 81 ~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~- 158 (973)
+|.++ .+|..+..+++|++|++++|++++..+ ..+..+++|++|++++|.+++..|..|.++++|++|++++|.+++
T Consensus 87 ~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 165 (306)
T 2z66_A 87 FNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQEN 165 (306)
T ss_dssp SCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGG
T ss_pred CCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccc
Confidence 99988 678888889999999999999885443 578889999999999999887788888889999999999998875
Q ss_pred CCCccccCccccceeeecccccCCCCCccccccCccceeeccccccccccccccCCCCcccEEecCCcccCCCCCccccc
Q 002069 159 AIPFSLGNLTNLVTLYIGINALSGSIPNEIGNLKSLSDLRLDYNTLSGSILYSFGNLTKLEILYLDVNALSGLIPNEIGN 238 (973)
Q Consensus 159 ~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~ 238 (973)
..|..+..+++|++|++++|++++..|..+..+++|++|++++|+++++++..|..+++|+.|++++|++++..|..+..
T Consensus 166 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 245 (306)
T 2z66_A 166 FLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQH 245 (306)
T ss_dssp EECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCC
T ss_pred cchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHh
Confidence 57888888899999999999888777888888888999999999888888778888888999999999888888888888
Q ss_pred cc-cccceecccccccC
Q 002069 239 LK-SLLALQLNYNTLSG 254 (973)
Q Consensus 239 l~-~L~~L~L~~N~l~~ 254 (973)
++ +|++|+|++|.++.
T Consensus 246 ~~~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 246 FPSSLAFLNLTQNDFAC 262 (306)
T ss_dssp CCTTCCEEECTTCCEEC
T ss_pred hhccCCEEEccCCCeec
Confidence 84 88888888888864
No 300
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=1.1e-29 Score=279.05 Aligned_cols=227 Identities=22% Similarity=0.271 Sum_probs=188.7
Q ss_pred CCCCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCcccCCccccCccccceee
Q 002069 23 LTHLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSLSDLR 102 (973)
Q Consensus 23 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 102 (973)
..++++|+|++|+++ .+|..++++++|++|+|++|+++ .+|..++++++|++|+|++|+++ .+|..++.+++|++|+
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEE
T ss_pred ccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEE
Confidence 467888888888887 66777888888888888888887 78888888888888888888887 7788888888888888
Q ss_pred ccCCcCCCCCCCcccc---------CCccceeecccccccccCcccccccCCCCceecccCCCCCCCCccccCcccccee
Q 002069 103 LSNNSLNGSIPSSLGN---------LTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSGAIPFSLGNLTNLVTL 173 (973)
Q Consensus 103 L~~n~l~~~~p~~~~~---------l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L 173 (973)
|++|++.+.+|..++. +++|++|+|++|+++ .+|..|+++++|++|++++|+++ .+|..+..+++|+.|
T Consensus 157 L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~-~l~~~l~~l~~L~~L 234 (328)
T 4fcg_A 157 IRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEEL 234 (328)
T ss_dssp EEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC-CCCGGGGGCTTCCEE
T ss_pred CCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC-cCchhhccCCCCCEE
Confidence 8887777778877654 888888888888888 78888888888888888888888 456678888888888
Q ss_pred eecccccCCCCCccccccCccceeeccccccccccccccCCCCcccEEecCCcccCCCCCccccccccccceeccccccc
Q 002069 174 YIGINALSGSIPNEIGNLKSLSDLRLDYNTLSGSILYSFGNLTKLEILYLDVNALSGLIPNEIGNLKSLLALQLNYNTLS 253 (973)
Q Consensus 174 ~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~ 253 (973)
++++|.+.+.+|..++++++|++|++++|.+.+..+..|.++++|+.|+|++|.+.+..|..+.++++|+.+++..+.+.
T Consensus 235 ~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 235 DLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp ECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred ECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 88888888888888888888888888888888888888888888888999888888888888888888888888877665
Q ss_pred C
Q 002069 254 G 254 (973)
Q Consensus 254 ~ 254 (973)
.
T Consensus 315 ~ 315 (328)
T 4fcg_A 315 Q 315 (328)
T ss_dssp C
T ss_pred H
Confidence 3
No 301
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=4.5e-32 Score=325.29 Aligned_cols=399 Identities=16% Similarity=0.102 Sum_probs=255.4
Q ss_pred CccccceeeecccccCCCCCcccccc-C-ccceeeccccc-ccccc-ccccCCCCcccEEecCCcccCCCCC----cccc
Q 002069 166 NLTNLVTLYIGINALSGSIPNEIGNL-K-SLSDLRLDYNT-LSGSI-LYSFGNLTKLEILYLDVNALSGLIP----NEIG 237 (973)
Q Consensus 166 ~l~~L~~L~l~~n~l~~~~p~~~~~l-~-~L~~L~L~~N~-l~~~~-~~~~~~l~~L~~L~L~~n~i~~~~~----~~~~ 237 (973)
.+++|++|+|++|.+++..+..+... + +|++|+|++|. ++... .....++++|++|+|++|.+++... ..+.
T Consensus 110 ~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~ 189 (592)
T 3ogk_B 110 NLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQ 189 (592)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHH
T ss_pred hCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHh
Confidence 45666666666666554444445442 3 37777776665 22111 1112356777777777777665422 2344
Q ss_pred ccccccceecccccccCCCCcccCCcchhhhccCCCcccCchhhhhhccccccceEEcccccccCCcCchhhcCCcccee
Q 002069 238 NLKSLLALQLNYNTLSGSIPCSFGNLTKLVISCLGTNALSSSILEEIGNLKSLLHLQLNYNTLSGSIPLSLGSLTNLATL 317 (973)
Q Consensus 238 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 317 (973)
++++|+.|++++|.+++.... .....+.++++|++|++++|.+.+ ++..+..+++|++|
T Consensus 190 ~~~~L~~L~L~~n~~~~~~~~--------------------~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L 248 (592)
T 3ogk_B 190 HNTSLEVLNFYMTEFAKISPK--------------------DLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEF 248 (592)
T ss_dssp HCCCCCEEECTTCCCSSCCHH--------------------HHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEE
T ss_pred cCCCccEEEeeccCCCccCHH--------------------HHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhh
Confidence 566777777777766522111 123345566777888888777774 55677777888888
Q ss_pred eccccccC---CCCCccccCCCCCCcEEcCCCCCCCcchhccCCCCCCcEEEccCCcccCCCC-cccccccccchhcccc
Q 002069 318 YFSTNALS---GSIPNEITNLRSLSDLQLSENTLNGSIPLALGNLTKLVSLDLSINKLSGSIP-LSFASLTSLTTLYLYE 393 (973)
Q Consensus 318 ~L~~n~l~---~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~-~~~~~l~~L~~L~L~~ 393 (973)
+++.+... ...+..+..+++|+.|+++++... ..|..+..+++|++|+|++|.+++... ..+..+++|++|+++
T Consensus 249 ~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~- 326 (592)
T 3ogk_B 249 CGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR- 326 (592)
T ss_dssp EECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTT-TGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-
T ss_pred cccccccccchHHHHHHhhccccccccCccccchh-HHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-
Confidence 87753322 233455667778888888775443 566677777888888888887664333 235677788888887
Q ss_pred ccccc-CCCcccCCCCCCCEEEcc-----------CCCCCCCcchhhhhhcccceEEEeeCcccccccCCCCCC-Ccccc
Q 002069 394 NSLCD-SIPKEIGDMKSLSILDLS-----------SNKLNGSIPLSLANLTNSLKVLYLSSNHIVGEIPLGHGK-FSSLI 460 (973)
Q Consensus 394 N~l~~-~~~~~~~~l~~L~~L~Ls-----------~N~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~-~~~L~ 460 (973)
|.+++ ..+..+..+++|++|+++ .|.+++.....+....++|++|+++.|.+++.....++. +++|+
T Consensus 327 ~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~ 406 (592)
T 3ogk_B 327 NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLC 406 (592)
T ss_dssp GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCC
T ss_pred CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCc
Confidence 44433 233333567788888888 356664434444443457888888888887766555544 67888
Q ss_pred eeecc----CCccCCC-----CCcccccccccccccccccc--cccccCcccc-ccccccEEeecCccCCCC-CCccccc
Q 002069 461 QLILN----NNELSGQ-----LSPELGSLNQLEYLDLSANT--FHNSIPESLG-NLVKLHYLNLSNNQFSQK-IPNPIEK 527 (973)
Q Consensus 461 ~L~l~----~N~l~~~-----~~~~l~~l~~L~~L~Ls~N~--i~~~~~~~l~-~l~~L~~L~L~~N~l~~~-~~~~~~~ 527 (973)
+|+++ .|.+++. .+..+..+++|++|+++.|. +++..+..+. .+++|++|+|++|++++. .+..+..
T Consensus 407 ~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~ 486 (592)
T 3ogk_B 407 DFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRG 486 (592)
T ss_dssp EEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTC
T ss_pred EEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhc
Confidence 88885 6677753 22335668889999987543 6655555554 378899999999988763 3445577
Q ss_pred ccccCeecccccccCCCcchh-hcccccccccccccccccCccchhhh-ccccccEEeCcCC
Q 002069 528 LIHLSELDLSYKIFGEEIPSQ-VCSMQSLEKLNLSHNNLSGSISRCFE-EMHWLSCIDISYN 587 (973)
Q Consensus 528 l~~L~~L~ls~n~i~~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~l~l~~N 587 (973)
+++|+.|++++|.+++.+... +..+++|++|+|++|++++.+...+. .++++....+..+
T Consensus 487 ~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~~~~~l~~~~p~l~~~~~~~~ 548 (592)
T 3ogk_B 487 CPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSR 548 (592)
T ss_dssp CTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTTCTTGGGGCCTTEEEEEECCC
T ss_pred CcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHHHHHHHHHhCCCcEEEEecCc
Confidence 888999999998887654444 34688899999999998877655543 4677766666554
No 302
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=8.4e-30 Score=284.02 Aligned_cols=280 Identities=20% Similarity=0.166 Sum_probs=134.2
Q ss_pred CeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCcccCCccccCccccceeeccCCcCCCCCCCccccCCccceeecccc
Q 002069 51 NGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSLSDLRLSNNSLNGSIPSSLGNLTNLVTLYLHMN 130 (973)
Q Consensus 51 ~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 130 (973)
...++++|+++ .+|..+. ++|++|++++|++++..+..+..+++|++|+|++|++++..|..|+++++|++|+|++|
T Consensus 34 ~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n 110 (353)
T 2z80_A 34 GICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYN 110 (353)
T ss_dssp SEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred eEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCC
Confidence 33444444444 3444332 24444444444444333334444444444444444444333444444444445555444
Q ss_pred cccccCcccccccCCCCceecccCCCCCCCC-ccccCccccceeeeccc-ccCCCCCccccccCccceeecccccccccc
Q 002069 131 ALSGSIPDEIGNLKFLSDLQVSYNTLSGAIP-FSLGNLTNLVTLYIGIN-ALSGSIPNEIGNLKSLSDLRLDYNTLSGSI 208 (973)
Q Consensus 131 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~l~~l~~L~~L~l~~n-~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 208 (973)
++++..+..|+++++|++|++++|++++..+ ..+..+++|++|++++| .++...|..+.++++|++|++++|+++++.
T Consensus 111 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 190 (353)
T 2z80_A 111 YLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYE 190 (353)
T ss_dssp CCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEEC
T ss_pred cCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccC
Confidence 4443222234444555555555554442222 24445555555555554 244333444555555555555555555555
Q ss_pred ccccCCCCcccEEecCCcccCCCCCccccccccccceecccccccCCCCcccCCcchhhhccCCCcccCchhhhhhcccc
Q 002069 209 LYSFGNLTKLEILYLDVNALSGLIPNEIGNLKSLLALQLNYNTLSGSIPCSFGNLTKLVISCLGTNALSSSILEEIGNLK 288 (973)
Q Consensus 209 ~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~ 288 (973)
+..|..+++|++|++++|.++.+.+..+..+++|+.|++++|++++..+..+.. .....
T Consensus 191 ~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~---------------------~~~~~ 249 (353)
T 2z80_A 191 PKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELST---------------------GETNS 249 (353)
T ss_dssp TTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC---------------------------CCC
T ss_pred HHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCcccccccccccc---------------------ccccc
Confidence 555555555555555555554443333344555566666666555433322111 11223
Q ss_pred ccceEEcccccccCCcCchhhcCCccceeeccccccCCCCCccccCCCCCCcEEcCCCCCCCcchhccCCCCCCcEEEcc
Q 002069 289 SLLHLQLNYNTLSGSIPLSLGSLTNLATLYFSTNALSGSIPNEITNLRSLSDLQLSENTLNGSIPLALGNLTKLVSLDLS 368 (973)
Q Consensus 289 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 368 (973)
.++.++++++.+++ |.+. .+|..+..+++|++|+|++|+++...+..|.++++|++|+|+
T Consensus 250 ~l~~l~L~~~~l~~-------------------~~l~-~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~ 309 (353)
T 2z80_A 250 LIKKFTFRNVKITD-------------------ESLF-QVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLH 309 (353)
T ss_dssp CCCEEEEESCBCCH-------------------HHHH-HHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred hhhccccccccccC-------------------cchh-hhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEee
Confidence 34444444444332 1111 234455666666666666666664444445667777777777
Q ss_pred CCcccC
Q 002069 369 INKLSG 374 (973)
Q Consensus 369 ~N~i~~ 374 (973)
+|++.+
T Consensus 310 ~N~~~~ 315 (353)
T 2z80_A 310 TNPWDC 315 (353)
T ss_dssp SSCBCC
T ss_pred CCCccC
Confidence 777664
No 303
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=6.6e-30 Score=284.88 Aligned_cols=274 Identities=21% Similarity=0.206 Sum_probs=155.9
Q ss_pred EeCCCCCCCCCCCcccCCCCCCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcC
Q 002069 5 LGLSFNQFSGSIPPEIGHLTHLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLL 84 (973)
Q Consensus 5 L~l~~~~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l 84 (973)
.|+++++++ .+|..+. ++|++|++++|++++..+..|..+++|++|++++|++++..|..|+++++|++|++++|++
T Consensus 36 c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l 112 (353)
T 2z80_A 36 CKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYL 112 (353)
T ss_dssp EECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred eeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcC
Confidence 456666665 5666544 3666666666666655444666666666666666666655555666666666666666666
Q ss_pred cccCCccccCccccceeeccCCcCCCCCCC--ccccCCccceeecccc-cccccCcccccccCCCCceecccCCCCCCCC
Q 002069 85 SGSIPNEVGSLKSLSDLRLSNNSLNGSIPS--SLGNLTNLVTLYLHMN-ALSGSIPDEIGNLKFLSDLQVSYNTLSGAIP 161 (973)
Q Consensus 85 ~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~--~~~~l~~L~~L~L~~n-~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 161 (973)
++..+..++.+++|++|++++|+++ .+|. .+.++++|++|++++| .++...|..|+++++|++|++++|++++..|
T Consensus 113 ~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 191 (353)
T 2z80_A 113 SNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEP 191 (353)
T ss_dssp SSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECT
T ss_pred CcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCH
Confidence 6322233666666666666666666 3443 5666666666666666 3554445556666666666666666665556
Q ss_pred ccccCccccceeeecccccCCCCCcc-ccccCccceeeccccccccccccccC---CCCcccEEecCCcccCCCCCcccc
Q 002069 162 FSLGNLTNLVTLYIGINALSGSIPNE-IGNLKSLSDLRLDYNTLSGSILYSFG---NLTKLEILYLDVNALSGLIPNEIG 237 (973)
Q Consensus 162 ~~l~~l~~L~~L~l~~n~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~~~~~~---~l~~L~~L~L~~n~i~~~~~~~~~ 237 (973)
..+..+++|++|++++|+++. +|.. +..+++|++|++++|++++..+..+. ....++.++++++.+++.
T Consensus 192 ~~l~~l~~L~~L~l~~n~l~~-~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~------ 264 (353)
T 2z80_A 192 KSLKSIQNVSHLILHMKQHIL-LLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDE------ 264 (353)
T ss_dssp TTTTTCSEEEEEEEECSCSTT-HHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHH------
T ss_pred HHHhccccCCeecCCCCcccc-chhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCc------
Confidence 666666666666666666652 3332 33456666666666666554433322 233444444444444321
Q ss_pred ccccccceecccccccCCCCcccCCcchhhhccCCCcccCchhhhhhccccccceEEcccccccCC
Q 002069 238 NLKSLLALQLNYNTLSGSIPCSFGNLTKLVISCLGTNALSSSILEEIGNLKSLLHLQLNYNTLSGS 303 (973)
Q Consensus 238 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~ 303 (973)
.+. .+|..+..+++|+.|++++|.++.++...|..+++|++|++++|.+.+.
T Consensus 265 -------------~l~-~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~ 316 (353)
T 2z80_A 265 -------------SLF-QVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 316 (353)
T ss_dssp -------------HHH-HHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred -------------chh-hhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCc
Confidence 111 1233444445555555555555544444456677777888888877753
No 304
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=3.7e-29 Score=269.85 Aligned_cols=255 Identities=22% Similarity=0.190 Sum_probs=189.4
Q ss_pred cEEeCCCCCCCCCCCcccCCCCCCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCC
Q 002069 3 KVLGLSFNQFSGSIPPEIGHLTHLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNN 82 (973)
Q Consensus 3 ~~L~l~~~~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n 82 (973)
++++.++++++ .+|..+ .++|++|+|++|++++..|..|..+++|++|++++|++++..|..|+.+++|++|++++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 45778888887 677654 467888888888888766677888888888888888888666778888888888888888
Q ss_pred c-CcccCCccccCccccceeeccCCcCCCCCCCccccCCccceeecccccccccCcccccccCCCCceecccCCCCCCCC
Q 002069 83 L-LSGSIPNEVGSLKSLSDLRLSNNSLNGSIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSGAIP 161 (973)
Q Consensus 83 ~-l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 161 (973)
. ++...|..+..+++|++|++++|++++..|..+.++++|++|++++|++++..+..|+++++|++|++++|++++..+
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 170 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPE 170 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECT
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCH
Confidence 6 665557778888888888888888886667778888888888888888876555667888888888888888876666
Q ss_pred ccccCccccceeeecccccCCCCCccccccCccceeeccccccccccccccCCCCcccEEecCCcccCCCCCcccccccc
Q 002069 162 FSLGNLTNLVTLYIGINALSGSIPNEIGNLKSLSDLRLDYNTLSGSILYSFGNLTKLEILYLDVNALSGLIPNEIGNLKS 241 (973)
Q Consensus 162 ~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~ 241 (973)
..|..+++|+.|++++|++++..|..+.++++|++|++++|+++++++..|..+++|+.|++++|.+....+. ..-...
T Consensus 171 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~-~~~~~~ 249 (285)
T 1ozn_A 171 RAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRA-RPLWAW 249 (285)
T ss_dssp TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGG-HHHHHH
T ss_pred HHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCc-HHHHHH
Confidence 6677788888888888888776677777788888888888888777777777788888888888877654221 122234
Q ss_pred ccceecccccccCCCCcccC
Q 002069 242 LLALQLNYNTLSGSIPCSFG 261 (973)
Q Consensus 242 L~~L~L~~N~l~~~~~~~~~ 261 (973)
++.+..+.+.+....|..+.
T Consensus 250 l~~~~~~~~~~~c~~p~~l~ 269 (285)
T 1ozn_A 250 LQKFRGSSSEVPCSLPQRLA 269 (285)
T ss_dssp HHHCCSEECCCBEEESGGGT
T ss_pred HHhcccccCccccCCchHhC
Confidence 55556666666655555443
No 305
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=6.3e-32 Score=324.03 Aligned_cols=395 Identities=14% Similarity=0.075 Sum_probs=206.0
Q ss_pred CCCCCcEEEccCCcCcccCCccccCc--cccceeeccCCcC-CC-CCCCccccCCccceeeccccccccc----Cccccc
Q 002069 70 NLTSLIYIDIGNNLLSGSIPNEVGSL--KSLSDLRLSNNSL-NG-SIPSSLGNLTNLVTLYLHMNALSGS----IPDEIG 141 (973)
Q Consensus 70 ~l~~L~~L~l~~n~l~~~~p~~~~~l--~~L~~L~L~~n~l-~~-~~p~~~~~l~~L~~L~L~~n~l~~~----~p~~~~ 141 (973)
.+++|++|+|++|.+++..+..+..+ .+|++|+|++|.- .. .++....++++|++|+|++|.+++. ++..+.
T Consensus 110 ~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~ 189 (592)
T 3ogk_B 110 NLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQ 189 (592)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHH
T ss_pred hCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHh
Confidence 56777777777777765555555553 3477777777652 10 1222234667777777777776544 333455
Q ss_pred ccCCCCceecccCCCCC----CCCccccCccccceeeecccccCCCCCccccccCccceeeccccccc---cccccccCC
Q 002069 142 NLKFLSDLQVSYNTLSG----AIPFSLGNLTNLVTLYIGINALSGSIPNEIGNLKSLSDLRLDYNTLS---GSILYSFGN 214 (973)
Q Consensus 142 ~l~~L~~L~l~~N~l~~----~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~---~~~~~~~~~ 214 (973)
++++|++|++++|.+++ .++..+.++++|+.|++++|.+.+ +|..+.++++|++|+++..... ......+..
T Consensus 190 ~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~ 268 (592)
T 3ogk_B 190 HNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVF 268 (592)
T ss_dssp HCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCC
T ss_pred cCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhc
Confidence 67777777777777762 233344566777777777777773 5667777777777777643222 122345566
Q ss_pred CCcccEEecCCcccCCCCCccccccccccceecccccccCCCCcccCCcchhhhccCCCcccCchhhhhhccccccceEE
Q 002069 215 LTKLEILYLDVNALSGLIPNEIGNLKSLLALQLNYNTLSGSIPCSFGNLTKLVISCLGTNALSSSILEEIGNLKSLLHLQ 294 (973)
Q Consensus 215 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~L~ 294 (973)
+++|+.|+++++... ..|..+..+++|++|+|++|.++.... ...+..+++|++|+
T Consensus 269 ~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~~l~~~~~-----------------------~~~~~~~~~L~~L~ 324 (592)
T 3ogk_B 269 PRKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLLYALLETEDH-----------------------CTLIQKCPNLEVLE 324 (592)
T ss_dssp CTTCCEEEETTCCTT-TGGGGGGGGGGCCEEEETTCCCCHHHH-----------------------HHHHTTCTTCCEEE
T ss_pred cccccccCccccchh-HHHHHHhhcCCCcEEecCCCcCCHHHH-----------------------HHHHHhCcCCCEEe
Confidence 777777777765433 235666677777777777776542211 12234445555555
Q ss_pred cccccccC-CcCchhhcCCccceeeccc-----------cccCCC-CCccccCCCCCCcEEcCCCCCCCcchhccCC-CC
Q 002069 295 LNYNTLSG-SIPLSLGSLTNLATLYFST-----------NALSGS-IPNEITNLRSLSDLQLSENTLNGSIPLALGN-LT 360 (973)
Q Consensus 295 l~~n~l~~-~~~~~~~~l~~L~~L~L~~-----------n~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-l~ 360 (973)
++ +.+.+ ..+..+..+++|++|++++ |.+++. .+..+..+++|++|+++.|.+++..+..+.. ++
T Consensus 325 L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~ 403 (592)
T 3ogk_B 325 TR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLK 403 (592)
T ss_dssp EE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCC
T ss_pred cc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCC
Confidence 54 22221 1222223445555555552 333321 1111233455555555555555444444433 55
Q ss_pred CCcEEEcc----CCcccCC-----CCcccccccccchhccccc--ccccCCCcccC-CCCCCCEEEccCCCCCCCcchhh
Q 002069 361 KLVSLDLS----INKLSGS-----IPLSFASLTSLTTLYLYEN--SLCDSIPKEIG-DMKSLSILDLSSNKLNGSIPLSL 428 (973)
Q Consensus 361 ~L~~L~Ls----~N~i~~~-----~~~~~~~l~~L~~L~L~~N--~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~~~~~ 428 (973)
+|+.|+++ .|.+++. .+..+.++++|+.|+++.| .+++..+..+. .+++|++|+|++|++++.....+
T Consensus 404 ~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~ 483 (592)
T 3ogk_B 404 NLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEF 483 (592)
T ss_dssp SCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHH
T ss_pred CCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHH
Confidence 55555554 4444432 1122344555555555432 23332222222 24556666666666553222222
Q ss_pred hhhcccceEEEeeCccccccc-CCCCCCCcccceeeccCCccCCCCCcccc-cccccccccccc
Q 002069 429 ANLTNSLKVLYLSSNHIVGEI-PLGHGKFSSLIQLILNNNELSGQLSPELG-SLNQLEYLDLSA 490 (973)
Q Consensus 429 ~~~~~~L~~L~L~~n~l~~~~-~~~~~~~~~L~~L~l~~N~l~~~~~~~l~-~l~~L~~L~Ls~ 490 (973)
....++|++|++++|.+++.. +.....+++|++|++++|++++.....+. .++.+....+..
T Consensus 484 ~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~~~~~l~~~~p~l~~~~~~~ 547 (592)
T 3ogk_B 484 SRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPS 547 (592)
T ss_dssp HTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTTCTTGGGGCCTTEEEEEECC
T ss_pred HhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHHHHHHHHHhCCCcEEEEecC
Confidence 222235666666666654332 22223455666666666666544333332 344444443333
No 306
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=1.9e-29 Score=275.27 Aligned_cols=246 Identities=24% Similarity=0.223 Sum_probs=210.7
Q ss_pred CCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCC-cccCCCCCcEEEccCCcCcc--cCCccccCccccceee
Q 002069 26 LKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPP-SLGNLTSLIYIDIGNNLLSG--SIPNEVGSLKSLSDLR 102 (973)
Q Consensus 26 L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~-~~~~l~~L~~L~l~~n~l~~--~~p~~~~~l~~L~~L~ 102 (973)
-+.++.+++.++ .+|..+. ++|++|++++|+++ .+|. .|+++++|++|+|++|+++. ..|..+..+++|++|+
T Consensus 9 ~~~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~-~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~ 84 (306)
T 2z66_A 9 GTEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLD 84 (306)
T ss_dssp TTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEE
T ss_pred CCEEEcCCCCcc-cCCCCCC--CCCCEEECCCCccC-ccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEE
Confidence 368999999998 5777654 79999999999999 5554 57999999999999999973 2367778899999999
Q ss_pred ccCCcCCCCCCCccccCCccceeecccccccccCc-ccccccCCCCceecccCCCCCCCCccccCccccceeeecccccC
Q 002069 103 LSNNSLNGSIPSSLGNLTNLVTLYLHMNALSGSIP-DEIGNLKFLSDLQVSYNTLSGAIPFSLGNLTNLVTLYIGINALS 181 (973)
Q Consensus 103 L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~ 181 (973)
|++|+++ .+|..+.++++|++|++++|++++..+ ..+.++++|++|++++|.+++..|..+.++++|++|++++|.++
T Consensus 85 Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 163 (306)
T 2z66_A 85 LSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQ 163 (306)
T ss_dssp CCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEG
T ss_pred CCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccc
Confidence 9999998 688889999999999999999985544 57999999999999999999888888999999999999999998
Q ss_pred C-CCCccccccCccceeeccccccccccccccCCCCcccEEecCCcccCCCCCccccccccccceecccccccCCCCccc
Q 002069 182 G-SIPNEIGNLKSLSDLRLDYNTLSGSILYSFGNLTKLEILYLDVNALSGLIPNEIGNLKSLLALQLNYNTLSGSIPCSF 260 (973)
Q Consensus 182 ~-~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 260 (973)
+ ..|..+..+++|++|++++|+++++.+..|..+++|+.|++++|+++++.+..+..+++|+.|++++|++++..+..+
T Consensus 164 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 243 (306)
T 2z66_A 164 ENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQEL 243 (306)
T ss_dssp GGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSC
T ss_pred cccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHH
Confidence 6 578889999999999999999998888899999999999999999998888789999999999999999988777766
Q ss_pred CCcc-hhhhccCCCccc
Q 002069 261 GNLT-KLVISCLGTNAL 276 (973)
Q Consensus 261 ~~l~-~L~~l~l~~n~i 276 (973)
..++ +|+.+++++|.+
T Consensus 244 ~~~~~~L~~L~L~~N~~ 260 (306)
T 2z66_A 244 QHFPSSLAFLNLTQNDF 260 (306)
T ss_dssp CCCCTTCCEEECTTCCE
T ss_pred HhhhccCCEEEccCCCe
Confidence 6552 444444444444
No 307
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=6.2e-29 Score=272.96 Aligned_cols=226 Identities=24% Similarity=0.285 Sum_probs=152.7
Q ss_pred CCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCcccCCccccCccccceeeccCCcCCCCCCCccccCCccceee
Q 002069 47 LSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSLSDLRLSNNSLNGSIPSSLGNLTNLVTLY 126 (973)
Q Consensus 47 l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 126 (973)
..+++.|+|++|+++ .+|..++++++|++|+|++|.++ .+|..++.+++|++|+|++|+++ .+|..++++++|++|+
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEE
T ss_pred ccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEE
Confidence 356666777777766 66666666777777777777766 66666666777777777777766 5666666777777777
Q ss_pred cccccccccCcccccc---------cCCCCceecccCCCCCCCCccccCccccceeeecccccCCCCCccccccCcccee
Q 002069 127 LHMNALSGSIPDEIGN---------LKFLSDLQVSYNTLSGAIPFSLGNLTNLVTLYIGINALSGSIPNEIGNLKSLSDL 197 (973)
Q Consensus 127 L~~n~l~~~~p~~~~~---------l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L 197 (973)
|++|.+.+.+|..++. +++|++|++++|+++ .+|..++.+++|++|++++|+++ .+|..+..+++|++|
T Consensus 157 L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~-~l~~~l~~l~~L~~L 234 (328)
T 4fcg_A 157 IRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEEL 234 (328)
T ss_dssp EEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC-CCCGGGGGCTTCCEE
T ss_pred CCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC-cCchhhccCCCCCEE
Confidence 7766666566665543 667777777777666 55666666777777777777766 355566666777777
Q ss_pred eccccccccccccccCCCCcccEEecCCcccCCCCCccccccccccceecccccccCCCCcccCCcchhhhccCCCcccC
Q 002069 198 RLDYNTLSGSILYSFGNLTKLEILYLDVNALSGLIPNEIGNLKSLLALQLNYNTLSGSIPCSFGNLTKLVISCLGTNALS 277 (973)
Q Consensus 198 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~n~i~ 277 (973)
++++|.+.+..+..|+++++|+.|++++|.+.+..|..+.++++|+.|+|++|++.+.+|..++++++|+.+.+..+.+.
T Consensus 235 ~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 235 DLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp ECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred ECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 77776666666666666777777777776666666666666777777777776666666666777776666666655544
No 308
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=1e-28 Score=284.88 Aligned_cols=245 Identities=22% Similarity=0.227 Sum_probs=154.9
Q ss_pred EEeCCCCCCCCCCCcccCCCCCCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCc
Q 002069 4 VLGLSFNQFSGSIPPEIGHLTHLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNL 83 (973)
Q Consensus 4 ~L~l~~~~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~ 83 (973)
.++.++++++ .+|..+. +++++|+|++|++++..|..|..+++|++|+|++|++++..|..|.++++|++|+|++|+
T Consensus 58 ~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~ 134 (452)
T 3zyi_A 58 KVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNW 134 (452)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCc
Confidence 4556666665 5665544 466666666666666666666666666666666666665555666666666666666666
Q ss_pred CcccCCccccCccccceeeccCCcCCCCCCCccccCCccceeeccc-ccccccCcccccccCCCCceecccCCCCCCCCc
Q 002069 84 LSGSIPNEVGSLKSLSDLRLSNNSLNGSIPSSLGNLTNLVTLYLHM-NALSGSIPDEIGNLKFLSDLQVSYNTLSGAIPF 162 (973)
Q Consensus 84 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~-n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 162 (973)
+++..+..|+.+++|++|+|++|+++...+..|.++++|++|++++ |.+....+..|.++++|++|++++|++++. |
T Consensus 135 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~- 212 (452)
T 3zyi_A 135 LTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P- 212 (452)
T ss_dssp CSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-
T ss_pred CCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-
Confidence 6644444566666666666666666644444666666666666666 344433334566666666666666666632 3
Q ss_pred cccCccccceeeecccccCCCCCccccccCccceeeccccccccccccccCCCCcccEEecCCcccCCCCCccccccccc
Q 002069 163 SLGNLTNLVTLYIGINALSGSIPNEIGNLKSLSDLRLDYNTLSGSILYSFGNLTKLEILYLDVNALSGLIPNEIGNLKSL 242 (973)
Q Consensus 163 ~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L 242 (973)
.+..+++|+.|++++|++++..|..|.++++|++|++++|+++++.+..|.++++|+.|+|++|+++++.+..|..+++|
T Consensus 213 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 292 (452)
T 3zyi_A 213 NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYL 292 (452)
T ss_dssp CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTC
T ss_pred cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCC
Confidence 35666666666666666666556666666666666666666666666666666666666666666666666666666666
Q ss_pred cceeccccccc
Q 002069 243 LALQLNYNTLS 253 (973)
Q Consensus 243 ~~L~L~~N~l~ 253 (973)
+.|+|++|.+.
T Consensus 293 ~~L~L~~Np~~ 303 (452)
T 3zyi_A 293 VELHLHHNPWN 303 (452)
T ss_dssp CEEECCSSCEE
T ss_pred CEEEccCCCcC
Confidence 66666666654
No 309
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=1.1e-28 Score=283.72 Aligned_cols=244 Identities=23% Similarity=0.222 Sum_probs=119.0
Q ss_pred EEeCCCCCCCCCCCcccCCCCCCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCc
Q 002069 4 VLGLSFNQFSGSIPPEIGHLTHLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNL 83 (973)
Q Consensus 4 ~L~l~~~~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~ 83 (973)
.++.++++++ .+|+.+. +++++|+|++|++++..+..|..+++|++|+|++|++++..|..|.++++|++|+|++|+
T Consensus 47 ~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~ 123 (440)
T 3zyj_A 47 KVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNR 123 (440)
T ss_dssp EEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSC
T ss_pred EEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCc
Confidence 3444444554 4554433 345555555555554444455555555555555555553344445555555555555555
Q ss_pred CcccCCccccCccccceeeccCCcCCCCCCCccccCCccceeecccc-cccccCcccccccCCCCceecccCCCCCCCCc
Q 002069 84 LSGSIPNEVGSLKSLSDLRLSNNSLNGSIPSSLGNLTNLVTLYLHMN-ALSGSIPDEIGNLKFLSDLQVSYNTLSGAIPF 162 (973)
Q Consensus 84 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n-~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 162 (973)
++...+..|..+++|++|+|++|+++...+..|.++++|++|+|++| .+....+..|.++++|++|++++|.++ .+|
T Consensus 124 l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~- 201 (440)
T 3zyj_A 124 LTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP- 201 (440)
T ss_dssp CSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-
T ss_pred CCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-
Confidence 55333334455555555555555554333334555555555555542 233222234555555555555555554 222
Q ss_pred cccCccccceeeecccccCCCCCccccccCccceeeccccccccccccccCCCCcccEEecCCcccCCCCCccccccccc
Q 002069 163 SLGNLTNLVTLYIGINALSGSIPNEIGNLKSLSDLRLDYNTLSGSILYSFGNLTKLEILYLDVNALSGLIPNEIGNLKSL 242 (973)
Q Consensus 163 ~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L 242 (973)
.+..+++|+.|+|++|++++..|..|.++++|++|+|++|+++++.+..|.++++|+.|+|++|+++++.+..|..+++|
T Consensus 202 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 281 (440)
T 3zyj_A 202 NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHL 281 (440)
T ss_dssp CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTC
T ss_pred ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCC
Confidence 24445555555555555554444455555555555555555554444455555555555555555554444444455555
Q ss_pred cceecccccc
Q 002069 243 LALQLNYNTL 252 (973)
Q Consensus 243 ~~L~L~~N~l 252 (973)
+.|+|++|.+
T Consensus 282 ~~L~L~~Np~ 291 (440)
T 3zyj_A 282 ERIHLHHNPW 291 (440)
T ss_dssp CEEECCSSCE
T ss_pred CEEEcCCCCc
Confidence 5555555544
No 310
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=1.6e-28 Score=264.97 Aligned_cols=226 Identities=26% Similarity=0.254 Sum_probs=204.8
Q ss_pred CCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCcccCCccccCccccceeeccC
Q 002069 26 LKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSLSDLRLSN 105 (973)
Q Consensus 26 L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~ 105 (973)
-++++.+++.++ .+|..+ .++|++|++++|++++..|..|+.+++|++|++++|.+++..|..++.+++|++|++++
T Consensus 13 ~~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 89 (285)
T 1ozn_A 13 KVTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSD 89 (285)
T ss_dssp SCEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CeEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCC
Confidence 478999999998 567654 57999999999999966667899999999999999999977789999999999999999
Q ss_pred Cc-CCCCCCCccccCCccceeecccccccccCcccccccCCCCceecccCCCCCCCCccccCccccceeeecccccCCCC
Q 002069 106 NS-LNGSIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSGAIPFSLGNLTNLVTLYIGINALSGSI 184 (973)
Q Consensus 106 n~-l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~ 184 (973)
|+ +....|..+..+++|++|++++|++++..|..|.++++|++|++++|++++..+..|..+++|+.|++++|++++..
T Consensus 90 n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 169 (285)
T 1ozn_A 90 NAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVP 169 (285)
T ss_dssp CTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEEC
T ss_pred CCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccC
Confidence 97 88666889999999999999999999877889999999999999999999777778999999999999999999766
Q ss_pred CccccccCccceeeccccccccccccccCCCCcccEEecCCcccCCCCCccccccccccceecccccccC
Q 002069 185 PNEIGNLKSLSDLRLDYNTLSGSILYSFGNLTKLEILYLDVNALSGLIPNEIGNLKSLLALQLNYNTLSG 254 (973)
Q Consensus 185 p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~ 254 (973)
+..+..+++|++|++++|+++++.+..|..+++|+.|++++|.++++.+..+..+++|+.|++++|.+..
T Consensus 170 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 239 (285)
T 1ozn_A 170 ERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVC 239 (285)
T ss_dssp TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEEC
T ss_pred HHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccC
Confidence 6679999999999999999999889999999999999999999999877889999999999999999874
No 311
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=5.1e-28 Score=277.98 Aligned_cols=237 Identities=23% Similarity=0.250 Sum_probs=176.9
Q ss_pred CCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCcccCCccccCccccceeecc
Q 002069 25 HLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSLSDLRLS 104 (973)
Q Consensus 25 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~ 104 (973)
..+.++.+++.++ .+|..+. ++++.|+|++|++++..+..|.++++|++|+|++|++++..|..|..+++|++|+|+
T Consensus 44 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~ 120 (440)
T 3zyj_A 44 QFSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELF 120 (440)
T ss_dssp TSCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECC
T ss_pred CCCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECC
Confidence 3567888888887 5676665 678888888888886666778888888888888888886666778888888888888
Q ss_pred CCcCCCCCCCccccCCccceeecccccccccCcccccccCCCCceeccc-CCCCCCCCccccCccccceeeecccccCCC
Q 002069 105 NNSLNGSIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSY-NTLSGAIPFSLGNLTNLVTLYIGINALSGS 183 (973)
Q Consensus 105 ~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~-N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~ 183 (973)
+|++++..+..|..+++|++|+|++|+++...+..|.++++|++|++++ |.++...+..|.++++|+.|++++|+++ .
T Consensus 121 ~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~ 199 (440)
T 3zyj_A 121 DNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-E 199 (440)
T ss_dssp SSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-S
T ss_pred CCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-c
Confidence 8888855555788888888888888888766666788888888888887 4455444556777888888888888877 4
Q ss_pred CCccccccCccceeeccccccccccccccCCCCcccEEecCCcccCCCCCccccccccccceecccccccCCCCcccCCc
Q 002069 184 IPNEIGNLKSLSDLRLDYNTLSGSILYSFGNLTKLEILYLDVNALSGLIPNEIGNLKSLLALQLNYNTLSGSIPCSFGNL 263 (973)
Q Consensus 184 ~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 263 (973)
+| .+..+++|++|+|++|+++++.+..|.++++|+.|+|++|+++++.+..|.++++|+.|+|++|++++..+..|..+
T Consensus 200 ~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 278 (440)
T 3zyj_A 200 IP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPL 278 (440)
T ss_dssp CC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSC
T ss_pred cc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccc
Confidence 55 46777777777777777777777777777777777777777777777777777777777777777765555444443
Q ss_pred chh
Q 002069 264 TKL 266 (973)
Q Consensus 264 ~~L 266 (973)
++|
T Consensus 279 ~~L 281 (440)
T 3zyj_A 279 HHL 281 (440)
T ss_dssp TTC
T ss_pred cCC
Confidence 333
No 312
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=5.9e-28 Score=278.53 Aligned_cols=236 Identities=23% Similarity=0.254 Sum_probs=166.1
Q ss_pred CCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCcccCCccccCccccceeeccC
Q 002069 26 LKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSLSDLRLSN 105 (973)
Q Consensus 26 L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~ 105 (973)
.+.++.+++.++ .+|..+. ++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|..+++|++|+|++
T Consensus 56 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~ 132 (452)
T 3zyi_A 56 FSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFD 132 (452)
T ss_dssp SCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCC
Confidence 466777777776 4666554 5777778887777766677777777778888877777766667777777777777777
Q ss_pred CcCCCCCCCccccCCccceeecccccccccCcccccccCCCCceeccc-CCCCCCCCccccCccccceeeecccccCCCC
Q 002069 106 NSLNGSIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSY-NTLSGAIPFSLGNLTNLVTLYIGINALSGSI 184 (973)
Q Consensus 106 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~-N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~ 184 (973)
|++++..+..|.++++|++|+|++|+++...+..|.++++|++|++++ |.++...+..|.++++|+.|++++|++++ +
T Consensus 133 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~ 211 (452)
T 3zyi_A 133 NWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-M 211 (452)
T ss_dssp SCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-C
T ss_pred CcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-c
Confidence 777755555677777777777777777755556677777777777777 44544444567777777777777777773 3
Q ss_pred CccccccCccceeeccccccccccccccCCCCcccEEecCCcccCCCCCccccccccccceecccccccCCCCcccCCcc
Q 002069 185 PNEIGNLKSLSDLRLDYNTLSGSILYSFGNLTKLEILYLDVNALSGLIPNEIGNLKSLLALQLNYNTLSGSIPCSFGNLT 264 (973)
Q Consensus 185 p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 264 (973)
| .+..+++|++|+|++|+++++.+..|.++++|+.|++++|+++++.+..|.++++|+.|+|++|++++..+..|..++
T Consensus 212 ~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 290 (452)
T 3zyi_A 212 P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLR 290 (452)
T ss_dssp C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCT
T ss_pred c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhcccc
Confidence 4 466677777777777777777677777777777777777777776666777777777777777777655554444433
Q ss_pred hh
Q 002069 265 KL 266 (973)
Q Consensus 265 ~L 266 (973)
+|
T Consensus 291 ~L 292 (452)
T 3zyi_A 291 YL 292 (452)
T ss_dssp TC
T ss_pred CC
Confidence 33
No 313
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=1.8e-29 Score=275.84 Aligned_cols=249 Identities=20% Similarity=0.198 Sum_probs=181.0
Q ss_pred cCCCCCCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCC-CCCCCccc-------CCCCCcEEEccCCcCcccCCcc
Q 002069 20 IGHLTHLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLK-GSIPPSLG-------NLTSLIYIDIGNNLLSGSIPNE 91 (973)
Q Consensus 20 ~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~-~~~p~~~~-------~l~~L~~L~l~~n~l~~~~p~~ 91 (973)
++..++|++|++++|.+ .+|..+... |+.|+|++|++. +.+|..+. ++++|++|+|++|++++.+|..
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 114 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPP 114 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHH
Confidence 34566778888888887 567666654 777888888873 44666655 6778888888888887777776
Q ss_pred c--cCccccceeeccCCcCCCCCCCccccC-----CccceeecccccccccCcccccccCCCCceecccCCCCCC--CCc
Q 002069 92 V--GSLKSLSDLRLSNNSLNGSIPSSLGNL-----TNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSGA--IPF 162 (973)
Q Consensus 92 ~--~~l~~L~~L~L~~n~l~~~~p~~~~~l-----~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~--~p~ 162 (973)
+ +.+++|++|+|++|++++. |..++.+ ++|++|+|++|++++..|+.|+++++|++|++++|++.+. .|.
T Consensus 115 ~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 193 (312)
T 1wwl_A 115 LLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLIS 193 (312)
T ss_dssp SSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHH
T ss_pred HHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHH
Confidence 5 7778888888888888754 7777776 7888888888888766667788888888888888877643 233
Q ss_pred cc--cCccccceeeecccccCCC--CC-ccccccCccceeeccccccccccc-cccCCCCcccEEecCCcccCCCCCccc
Q 002069 163 SL--GNLTNLVTLYIGINALSGS--IP-NEIGNLKSLSDLRLDYNTLSGSIL-YSFGNLTKLEILYLDVNALSGLIPNEI 236 (973)
Q Consensus 163 ~l--~~l~~L~~L~l~~n~l~~~--~p-~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~n~i~~~~~~~~ 236 (973)
.+ ..+++|++|++++|++++. ++ ..+.++++|++|++++|++++..+ ..+..+++|++|+|++|+++.+ |..+
T Consensus 194 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~i-p~~~ 272 (312)
T 1wwl_A 194 ALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLKQV-PKGL 272 (312)
T ss_dssp HSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCSSC-CSSC
T ss_pred HHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccChh-hhhc
Confidence 33 7778888888888887721 11 234566788888888888877553 4566678888888888888754 5445
Q ss_pred cccccccceecccccccCCCCcccCCcchhhhccCCCcccCc
Q 002069 237 GNLKSLLALQLNYNTLSGSIPCSFGNLTKLVISCLGTNALSS 278 (973)
Q Consensus 237 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~n~i~~ 278 (973)
. ++|++|+|++|++++. |. +..+++|+.+++++|.++.
T Consensus 273 ~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 273 P--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp C--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred c--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 4 7788888888888766 44 7788888888888887764
No 314
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=2.7e-27 Score=279.36 Aligned_cols=267 Identities=25% Similarity=0.279 Sum_probs=190.8
Q ss_pred CcEEeCCCCCCCCCCCcccCCCCCCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccC
Q 002069 2 LKVLGLSFNQFSGSIPPEIGHLTHLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGN 81 (973)
Q Consensus 2 l~~L~l~~~~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~ 81 (973)
+++|++++|+++ .+|..+. ++|++|+|++|.++ .+|. .+++|++|+|++|+++ .+|. .+++|++|+|++
T Consensus 42 l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~ 110 (622)
T 3g06_A 42 NAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIFS 110 (622)
T ss_dssp CCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEECS
T ss_pred CcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECcC
Confidence 567888888887 7787766 78888888888887 4555 5678888888888877 5666 667788888888
Q ss_pred CcCcccCCccccCccccceeeccCCcCCCCCCCccccCCccceeecccccccccCcccccccCCCCceecccCCCCCCCC
Q 002069 82 NLLSGSIPNEVGSLKSLSDLRLSNNSLNGSIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSGAIP 161 (973)
Q Consensus 82 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 161 (973)
|+++ .+|. .+++|++|++++|+++ .+|.. +++|++|+|++|+++ .+|. .+++|+.|++++|.+++ +|
T Consensus 111 N~l~-~l~~---~l~~L~~L~L~~N~l~-~lp~~---l~~L~~L~Ls~N~l~-~l~~---~~~~L~~L~L~~N~l~~-l~ 177 (622)
T 3g06_A 111 NPLT-HLPA---LPSGLCKLWIFGNQLT-SLPVL---PPGLQELSVSDNQLA-SLPA---LPSELCKLWAYNNQLTS-LP 177 (622)
T ss_dssp CCCC-CCCC---CCTTCCEEECCSSCCS-CCCCC---CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSC-CC
T ss_pred CcCC-CCCC---CCCCcCEEECCCCCCC-cCCCC---CCCCCEEECcCCcCC-CcCC---ccCCCCEEECCCCCCCC-Cc
Confidence 8887 4555 4567888888888887 46654 377788888888877 3454 24567777788887774 44
Q ss_pred ccccCccccceeeecccccCCCCCccccccCccceeeccccccccccccccCCCCcccEEecCCcccCCCCCcccccccc
Q 002069 162 FSLGNLTNLVTLYIGINALSGSIPNEIGNLKSLSDLRLDYNTLSGSILYSFGNLTKLEILYLDVNALSGLIPNEIGNLKS 241 (973)
Q Consensus 162 ~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~ 241 (973)
..+++|+.|++++|.+++ +|.. +++|+.|++++|.++.++. .+++|+.|++++|+++++ | ..+++
T Consensus 178 ---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~l~~----~~~~L~~L~Ls~N~L~~l-p---~~l~~ 242 (622)
T 3g06_A 178 ---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTSLPA----LPSGLKELIVSGNRLTSL-P---VLPSE 242 (622)
T ss_dssp ---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSSCCC----CCTTCCEEECCSSCCSCC-C---CCCTT
T ss_pred ---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCcccccCC----CCCCCCEEEccCCccCcC-C---CCCCc
Confidence 346777777777777773 4432 3667777777777775442 246677777777777764 3 34466
Q ss_pred ccceecccccccCCCCcccCCcchhhhccCCCcccCchhhhhhccccccceEEcccccccCCcCchhhcCCccceeeccc
Q 002069 242 LLALQLNYNTLSGSIPCSFGNLTKLVISCLGTNALSSSILEEIGNLKSLLHLQLNYNTLSGSIPLSLGSLTNLATLYFST 321 (973)
Q Consensus 242 L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~ 321 (973)
|+.|+|++|+|+++++ .+++|+.|++++|+|+ .+|..+..+++|+.|++++
T Consensus 243 L~~L~Ls~N~L~~lp~----------------------------~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~ 293 (622)
T 3g06_A 243 LKELMVSGNRLTSLPM----------------------------LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEG 293 (622)
T ss_dssp CCEEECCSSCCSCCCC----------------------------CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCS
T ss_pred CcEEECCCCCCCcCCc----------------------------ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecC
Confidence 7777777776653221 3467888899999888 6677888899999999999
Q ss_pred cccCCCCCccccCCC
Q 002069 322 NALSGSIPNEITNLR 336 (973)
Q Consensus 322 n~l~~~~~~~~~~l~ 336 (973)
|.+++..|..+..++
T Consensus 294 N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 294 NPLSERTLQALREIT 308 (622)
T ss_dssp CCCCHHHHHHHHHHH
T ss_pred CCCCCcCHHHHHhcc
Confidence 998887777776655
No 315
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=5.2e-27 Score=276.92 Aligned_cols=267 Identities=24% Similarity=0.266 Sum_probs=138.5
Q ss_pred CCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCcccCCccccCccccceeecc
Q 002069 25 HLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSLSDLRLS 104 (973)
Q Consensus 25 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~ 104 (973)
++++|++++|.++ .+|..+. ++|++|+|++|+++ .+|. .+++|++|+|++|+++ .+|. .+++|++|+|+
T Consensus 41 ~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls 109 (622)
T 3g06_A 41 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIF 109 (622)
T ss_dssp CCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEEC
T ss_pred CCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECc
Confidence 3555666666655 4454444 55555555555555 4444 3455555555555555 3443 34555555555
Q ss_pred CCcCCCCCCCccccCCccceeecccccccccCcccccccCCCCceecccCCCCCCCCccccCccccceeeecccccCCCC
Q 002069 105 NNSLNGSIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSGAIPFSLGNLTNLVTLYIGINALSGSI 184 (973)
Q Consensus 105 ~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~ 184 (973)
+|+++ .+|. .+++|++|++++|+++ .+|.. +++ |++|++++|++++ +
T Consensus 110 ~N~l~-~l~~---~l~~L~~L~L~~N~l~-~lp~~---l~~------------------------L~~L~Ls~N~l~~-l 156 (622)
T 3g06_A 110 SNPLT-HLPA---LPSGLCKLWIFGNQLT-SLPVL---PPG------------------------LQELSVSDNQLAS-L 156 (622)
T ss_dssp SCCCC-CCCC---CCTTCCEEECCSSCCS-CCCCC---CTT------------------------CCEEECCSSCCSC-C
T ss_pred CCcCC-CCCC---CCCCcCEEECCCCCCC-cCCCC---CCC------------------------CCEEECcCCcCCC-c
Confidence 55555 2333 3344555555555554 23322 234 4444444444442 2
Q ss_pred CccccccCccceeeccccccccccccccCCCCcccEEecCCcccCCCCCccccccccccceecccccccCCCCcccCCcc
Q 002069 185 PNEIGNLKSLSDLRLDYNTLSGSILYSFGNLTKLEILYLDVNALSGLIPNEIGNLKSLLALQLNYNTLSGSIPCSFGNLT 264 (973)
Q Consensus 185 p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 264 (973)
|. .+++|+.|++++|++++++ ..+++|+.|++++|.++++. . .+++|+.|++++|.++.+..
T Consensus 157 ~~---~~~~L~~L~L~~N~l~~l~----~~~~~L~~L~Ls~N~l~~l~-~---~~~~L~~L~L~~N~l~~l~~------- 218 (622)
T 3g06_A 157 PA---LPSELCKLWAYNNQLTSLP----MLPSGLQELSVSDNQLASLP-T---LPSELYKLWAYNNRLTSLPA------- 218 (622)
T ss_dssp CC---CCTTCCEEECCSSCCSCCC----CCCTTCCEEECCSSCCSCCC-C---CCTTCCEEECCSSCCSSCCC-------
T ss_pred CC---ccCCCCEEECCCCCCCCCc----ccCCCCcEEECCCCCCCCCC-C---ccchhhEEECcCCcccccCC-------
Confidence 22 1234455555555555433 23455555555555555432 1 12455555555555542110
Q ss_pred hhhhccCCCcccCchhhhhhccccccceEEcccccccCCcCchhhcCCccceeeccccccCCCCCccccCCCCCCcEEcC
Q 002069 265 KLVISCLGTNALSSSILEEIGNLKSLLHLQLNYNTLSGSIPLSLGSLTNLATLYFSTNALSGSIPNEITNLRSLSDLQLS 344 (973)
Q Consensus 265 ~L~~l~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 344 (973)
.+++|+.|++++|++++ +| ..+++|+.|++++|.|+. +|. .+++|+.|+|+
T Consensus 219 ---------------------~~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls 269 (622)
T 3g06_A 219 ---------------------LPSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVY 269 (622)
T ss_dssp ---------------------CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECC
T ss_pred ---------------------CCCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCC
Confidence 11355666666666664 33 334566666666666663 333 45667777777
Q ss_pred CCCCCCcchhccCCCCCCcEEEccCCcccCCCCcccccc
Q 002069 345 ENTLNGSIPLALGNLTKLVSLDLSINKLSGSIPLSFASL 383 (973)
Q Consensus 345 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l 383 (973)
+|.|+ .+|..+.++++|+.|+|++|.+++..|..+..+
T Consensus 270 ~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L 307 (622)
T 3g06_A 270 RNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREI 307 (622)
T ss_dssp SSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHH
T ss_pred CCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhc
Confidence 77776 445666667777777777777766555544433
No 316
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.94 E-value=1.5e-28 Score=269.18 Aligned_cols=256 Identities=18% Similarity=0.147 Sum_probs=134.8
Q ss_pred CEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCcccCCccccCccccceeeccCC
Q 002069 27 KLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSLSDLRLSNN 106 (973)
Q Consensus 27 ~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n 106 (973)
+.++++.+.+...++..+..+++|++|+|++|++++..|..|+.+++|++|+|++|++++..| +..+++|++|++++|
T Consensus 13 ~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n 90 (317)
T 3o53_A 13 KIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNN 90 (317)
T ss_dssp EEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSS
T ss_pred eEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCC
Confidence 334444444443333333344455555555555554444455555555555555555553322 555555555555555
Q ss_pred cCCCCCCCccccCCccceeecccccccccCcccccccCCCCceecccCCCCCCCCccccCccccceeeecccccCCCCCc
Q 002069 107 SLNGSIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSGAIPFSLGNLTNLVTLYIGINALSGSIPN 186 (973)
Q Consensus 107 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~ 186 (973)
++++ +| ..++|++|++++|++++..+. .+++|++|++++|++++..|..+..+++|++|++++|++++..|.
T Consensus 91 ~l~~-l~----~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 162 (317)
T 3o53_A 91 YVQE-LL----VGPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFA 162 (317)
T ss_dssp EEEE-EE----ECTTCCEEECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGG
T ss_pred cccc-cc----CCCCcCEEECCCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHH
Confidence 5552 22 225555555555555533322 234556666666666555555566666666666666666654444
Q ss_pred ccc-ccCccceeeccccccccccccccCCCCcccEEecCCcccCCCCCccccccccccceecccccccCCCCcccCCcch
Q 002069 187 EIG-NLKSLSDLRLDYNTLSGSILYSFGNLTKLEILYLDVNALSGLIPNEIGNLKSLLALQLNYNTLSGSIPCSFGNLTK 265 (973)
Q Consensus 187 ~~~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 265 (973)
.+. .+++|++|++++|++++++. ...+++|++|++++|++++++ ..+..+++|+.|+|++|++++ +|..+..+++
T Consensus 163 ~~~~~l~~L~~L~L~~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~l~-~~~~~l~~L~~L~L~~N~l~~-l~~~~~~l~~ 238 (317)
T 3o53_A 163 ELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFMG-PEFQSAAGVTWISLRNNKLVL-IEKALRFSQN 238 (317)
T ss_dssp GGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEEC-GGGGGGTTCSEEECTTSCCCE-ECTTCCCCTT
T ss_pred HHhhccCcCCEEECCCCcCccccc--ccccccCCEEECCCCcCCcch-hhhcccCcccEEECcCCcccc-hhhHhhcCCC
Confidence 442 56666666666666665422 233666666666666666553 336666666666666666653 3333444444
Q ss_pred hhhccCCCcccC-chhhhhhccccccceEEcc
Q 002069 266 LVISCLGTNALS-SSILEEIGNLKSLLHLQLN 296 (973)
Q Consensus 266 L~~l~l~~n~i~-~~~~~~~~~l~~L~~L~l~ 296 (973)
|+.+++++|.+. ...+..+..+++|+.|+++
T Consensus 239 L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~ 270 (317)
T 3o53_A 239 LEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (317)
T ss_dssp CCEEECTTCCCBHHHHHHHHHTCHHHHHHHHH
T ss_pred CCEEEccCCCccCcCHHHHHhccccceEEECC
Confidence 444444444333 2333444444555555554
No 317
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94 E-value=1.4e-28 Score=288.64 Aligned_cols=188 Identities=19% Similarity=0.094 Sum_probs=133.7
Q ss_pred cccCCCceeEEEE-EcCCCCEEEEEEcCCCCCc-------chhhHHHHHHHHHHhhcC-CCCceeeeceeeeccceeEEE
Q 002069 708 CIGNGGQGSVYKA-ELPTGEIVAVKKFHSPLPG-------EMACQQEFLNEGNALTKI-RHRNIVKFYGFCSHALHSFVV 778 (973)
Q Consensus 708 ~lg~G~~g~V~~~-~~~~~~~vavK~~~~~~~~-------~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~lv 778 (973)
..+.|++|.+..+ +.-.|+.||||++...... .....++|.+|+++++++ .|+||+++++++++++..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 4566777766665 2336889999998654211 123356799999999999 799999999999999999999
Q ss_pred EEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccC
Q 002069 779 YEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKL 858 (973)
Q Consensus 779 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 858 (973)
|||++|++|.+++.+.+ +++.. +|+.||+.||+|+|++ |||||||||+|||++.+|.+||+|||+|+....
T Consensus 321 MEyv~G~~L~d~i~~~~---~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~ 391 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAGE---EIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQ 391 (569)
T ss_dssp EECCCSEEHHHHHHTTC---CCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC-
T ss_pred EecCCCCcHHHHHHhCC---CCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCC
Confidence 99999999999997654 34443 5899999999999999 999999999999999999999999999998766
Q ss_pred CCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCC
Q 002069 859 GLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 905 (973)
Q Consensus 859 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p 905 (973)
........+||+.|||||++.+. +..++|+||+|++.+++.++..|
T Consensus 392 ~~~~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 392 DCSWPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp --CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CCccccCceechhhccHHHhCCC-CCCcccccccccchhhhccccch
Confidence 65556667899999999998764 67789999999998887665444
No 318
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.94 E-value=3.2e-28 Score=266.52 Aligned_cols=267 Identities=22% Similarity=0.200 Sum_probs=180.6
Q ss_pred cceeeccCCcCCCCCCCccccCCccceeecccccccccCcccccccCCCCceecccCCCCCCCCccccCccccceeeecc
Q 002069 98 LSDLRLSNNSLNGSIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSGAIPFSLGNLTNLVTLYIGI 177 (973)
Q Consensus 98 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~ 177 (973)
++.++++.+.+...++..+..+++|++|+|++|++++..|+.|+++++|++|++++|++++..| +..+++|++|++++
T Consensus 12 l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~ 89 (317)
T 3o53_A 12 YKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNN 89 (317)
T ss_dssp EEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCS
T ss_pred eeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcC
Confidence 4445555555553333344455566666666666665555666666666666666666654333 56666666666666
Q ss_pred cccCCCCCccccccCccceeeccccccccccccccCCCCcccEEecCCcccCCCCCccccccccccceecccccccCCCC
Q 002069 178 NALSGSIPNEIGNLKSLSDLRLDYNTLSGSILYSFGNLTKLEILYLDVNALSGLIPNEIGNLKSLLALQLNYNTLSGSIP 257 (973)
Q Consensus 178 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 257 (973)
|++++ + ...++|++|++++|+++++.+.. +++|++|++++|+++++.+..+..+++|++|++++|.++
T Consensus 90 n~l~~-l----~~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~---- 157 (317)
T 3o53_A 90 NYVQE-L----LVGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEID---- 157 (317)
T ss_dssp SEEEE-E----EECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCC----
T ss_pred Ccccc-c----cCCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCC----
Confidence 66652 1 12356666666666665544332 345566666666665555555555555555555555554
Q ss_pred cccCCcchhhhccCCCcccCchhhhhh-ccccccceEEcccccccCCcCchhhcCCccceeeccccccCCCCCccccCCC
Q 002069 258 CSFGNLTKLVISCLGTNALSSSILEEI-GNLKSLLHLQLNYNTLSGSIPLSLGSLTNLATLYFSTNALSGSIPNEITNLR 336 (973)
Q Consensus 258 ~~~~~l~~L~~l~l~~n~i~~~~~~~~-~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 336 (973)
...+..+ ..+++|++|++++|.+++.. ....+++|++|++++|.+++ +|..+..++
T Consensus 158 --------------------~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~ 214 (317)
T 3o53_A 158 --------------------TVNFAELAASSDTLEHLNLQYNFIYDVK--GQVVFAKLKTLDLSSNKLAF-MGPEFQSAA 214 (317)
T ss_dssp --------------------EEEGGGGGGGTTTCCEEECTTSCCCEEE--CCCCCTTCCEEECCSSCCCE-ECGGGGGGT
T ss_pred --------------------cccHHHHhhccCcCCEEECCCCcCcccc--cccccccCCEEECCCCcCCc-chhhhcccC
Confidence 4434444 36788999999999998652 23358999999999999985 455688999
Q ss_pred CCCcEEcCCCCCCCcchhccCCCCCCcEEEccCCccc-CCCCcccccccccchhccccc-ccccCCCc
Q 002069 337 SLSDLQLSENTLNGSIPLALGNLTKLVSLDLSINKLS-GSIPLSFASLTSLTTLYLYEN-SLCDSIPK 402 (973)
Q Consensus 337 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~-~~~~~~~~~l~~L~~L~L~~N-~l~~~~~~ 402 (973)
+|++|+|++|+++ .+|..+..+++|+.|++++|++. +..+..+..+++|+.|++++| .+.+..+.
T Consensus 215 ~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~ 281 (317)
T 3o53_A 215 GVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEE 281 (317)
T ss_dssp TCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSC
T ss_pred cccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchh
Confidence 9999999999999 56778999999999999999998 677888899999999999955 55554443
No 319
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.94 E-value=8.7e-28 Score=262.40 Aligned_cols=248 Identities=19% Similarity=0.175 Sum_probs=121.2
Q ss_pred cccCCCCceecccCCCCCCCCccccCccccceeeecccccC-CCCCcccc-------ccCccceeecccccccccccccc
Q 002069 141 GNLKFLSDLQVSYNTLSGAIPFSLGNLTNLVTLYIGINALS-GSIPNEIG-------NLKSLSDLRLDYNTLSGSILYSF 212 (973)
Q Consensus 141 ~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~-~~~p~~~~-------~l~~L~~L~L~~N~l~~~~~~~~ 212 (973)
++.++|++|++++|.+ .+|..+... |+.|++++|.++ ..+|..+. ++++|++|++++|++++..+..+
T Consensus 40 ~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 115 (312)
T 1wwl_A 40 GGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPL 115 (312)
T ss_dssp EEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCS
T ss_pred ccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHH
Confidence 3444455555555554 333333322 555555555552 23343333 45555555565555555444443
Q ss_pred --CCCCcccEEecCCcccCCCCCcccccc-----ccccceecccccccCCCCcccCCcchhhhccCCCcccCch--hhhh
Q 002069 213 --GNLTKLEILYLDVNALSGLIPNEIGNL-----KSLLALQLNYNTLSGSIPCSFGNLTKLVISCLGTNALSSS--ILEE 283 (973)
Q Consensus 213 --~~l~~L~~L~L~~n~i~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~n~i~~~--~~~~ 283 (973)
..+++|++|++++|++++. |..++.+ ++|++|+|++|++++..+..|+++++|+.|++++|.+... .+..
T Consensus 116 ~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 194 (312)
T 1wwl_A 116 LEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISA 194 (312)
T ss_dssp SSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHH
T ss_pred HHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHH
Confidence 5556666666666666555 5555555 5666666666666554444444444443333333333221 1112
Q ss_pred h--ccccccceEEcccccccCC---cCchhhcCCccceeeccccccCCCCCccccCCCCCCcEEcCCCCCCCcchhccCC
Q 002069 284 I--GNLKSLLHLQLNYNTLSGS---IPLSLGSLTNLATLYFSTNALSGSIPNEITNLRSLSDLQLSENTLNGSIPLALGN 358 (973)
Q Consensus 284 ~--~~l~~L~~L~l~~n~l~~~---~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 358 (973)
+ ..+++|++|++++|++++. ....+..+++|++|++++|.+++..|. ..+..
T Consensus 195 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-----------------------~~~~~ 251 (312)
T 1wwl_A 195 LCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGA-----------------------PSCDW 251 (312)
T ss_dssp SCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCC-----------------------SCCCC
T ss_pred HHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccch-----------------------hhhhh
Confidence 2 4555555555555555521 112223444444444444444433321 23334
Q ss_pred CCCCcEEEccCCcccCCCCcccccccccchhcccccccccCCCcccCCCCCCCEEEccCCCCC
Q 002069 359 LTKLVSLDLSINKLSGSIPLSFASLTSLTTLYLYENSLCDSIPKEIGDMKSLSILDLSSNKLN 421 (973)
Q Consensus 359 l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 421 (973)
+++|++|+|++|+|+ .+|..+. ++|++|+|++|+|++. |. +..+++|++|+|++|+++
T Consensus 252 l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~ 309 (312)
T 1wwl_A 252 PSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFL 309 (312)
T ss_dssp CTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTT
T ss_pred cCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCC
Confidence 455555555555555 3344333 5555666666665553 33 555666666666666655
No 320
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.94 E-value=7.9e-30 Score=306.01 Aligned_cols=438 Identities=15% Similarity=0.127 Sum_probs=259.6
Q ss_pred eeecccccccccCcccccccCCCCceecccCCCCC---CCCcc------------ccCccccceeeecccccCCCCCccc
Q 002069 124 TLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSG---AIPFS------------LGNLTNLVTLYIGINALSGSIPNEI 188 (973)
Q Consensus 124 ~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~---~~p~~------------l~~l~~L~~L~l~~n~l~~~~p~~~ 188 (973)
.++++++... ..+..+..+++|++|+++++.... ..|.. ...+++|++|++++|.+++..+..+
T Consensus 47 ~l~~~~~~~~-~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~l 125 (594)
T 2p1m_B 47 KVFIGNCYAV-SPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELI 125 (594)
T ss_dssp EEEESSTTSS-CHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHH
T ss_pred EEeecccccc-CHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHHH
Confidence 4555544322 223446677888899888875211 11211 2345677777777777665555555
Q ss_pred c-ccCccceeecccc-ccccccc-cccCCCCcccEEecCCcccCCCCCcccc----ccccccceecccccccCCCCcccC
Q 002069 189 G-NLKSLSDLRLDYN-TLSGSIL-YSFGNLTKLEILYLDVNALSGLIPNEIG----NLKSLLALQLNYNTLSGSIPCSFG 261 (973)
Q Consensus 189 ~-~l~~L~~L~L~~N-~l~~~~~-~~~~~l~~L~~L~L~~n~i~~~~~~~~~----~l~~L~~L~L~~N~l~~~~~~~~~ 261 (973)
. .+++|++|+|++| .++.... ..+.++++|++|++++|.+++..+..+. .+++|+.|++++|. ..+....
T Consensus 126 ~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~-~~~~~~~-- 202 (594)
T 2p1m_B 126 AKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLA-SEVSFSA-- 202 (594)
T ss_dssp HHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCC-SCCCHHH--
T ss_pred HHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccC-CcCCHHH--
Confidence 4 5677777777776 4443222 2233567777777777776655444333 34466666666664 1111111
Q ss_pred CcchhhhccCCCcccCchhhhhhccccccceEEcccc-cccCCcCchhhcCCccceeecccc-------ccCCCCCcccc
Q 002069 262 NLTKLVISCLGTNALSSSILEEIGNLKSLLHLQLNYN-TLSGSIPLSLGSLTNLATLYFSTN-------ALSGSIPNEIT 333 (973)
Q Consensus 262 ~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~L~l~~n-~l~~~~~~~~~~l~~L~~L~L~~n-------~l~~~~~~~~~ 333 (973)
....+..+++|++|++++| .+. .++..+..+++|+.|+++.+ .+.+ ++..+.
T Consensus 203 ------------------l~~l~~~~~~L~~L~L~~~~~~~-~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~-l~~~l~ 262 (594)
T 2p1m_B 203 ------------------LERLVTRCPNLKSLKLNRAVPLE-KLATLLQRAPQLEELGTGGYTAEVRPDVYSG-LSVALS 262 (594)
T ss_dssp ------------------HHHHHHHCTTCCEEECCTTSCHH-HHHHHHHHCTTCSEEECSBCCCCCCHHHHHH-HHHHHH
T ss_pred ------------------HHHHHHhCCCCcEEecCCCCcHH-HHHHHHhcCCcceEcccccccCccchhhHHH-HHHHHh
Confidence 1112234566777777766 333 25556666677777764433 2332 233556
Q ss_pred CCCCCCcE-EcCCCCCCCcchhccCCCCCCcEEEccCCcccCCCCc-ccccccccchhcccccccccCC-CcccCCCCCC
Q 002069 334 NLRSLSDL-QLSENTLNGSIPLALGNLTKLVSLDLSINKLSGSIPL-SFASLTSLTTLYLYENSLCDSI-PKEIGDMKSL 410 (973)
Q Consensus 334 ~l~~L~~L-~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~-~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L 410 (973)
++++|+.| .+.+... +.++..+..+++|++|+|++|.+++.... .+..+++|++|++++| +++.. +.....+++|
T Consensus 263 ~~~~L~~Ls~~~~~~~-~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L 340 (594)
T 2p1m_B 263 GCKELRCLSGFWDAVP-AYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDL 340 (594)
T ss_dssp TCTTCCEEECCBTCCG-GGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTC
T ss_pred cCCCcccccCCcccch-hhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCC
Confidence 66677766 3333222 13334444567777777777775532222 2345677777777766 43221 1222246777
Q ss_pred CEEEc---------cCCCCCCCcchhhhhhcccceEEEeeCcccccccCCCCC-CCcccceeecc--C----CccCCCCC
Q 002069 411 SILDL---------SSNKLNGSIPLSLANLTNSLKVLYLSSNHIVGEIPLGHG-KFSSLIQLILN--N----NELSGQLS 474 (973)
Q Consensus 411 ~~L~L---------s~N~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~-~~~~L~~L~l~--~----N~l~~~~~ 474 (973)
++|++ +.+.+++.....+....++|++|.++.|.+++.....+. .+++|+.|+++ + |.+++...
T Consensus 341 ~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~ 420 (594)
T 2p1m_B 341 RELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPL 420 (594)
T ss_dssp CEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCT
T ss_pred CEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCch
Confidence 77777 334555443444444335788887777777765544443 46778888887 4 45553211
Q ss_pred -----cccccccccccccccccccccccCccccc-cccccEEeecCccCCCCCCccc-ccccccCeecccccccCCCcch
Q 002069 475 -----PELGSLNQLEYLDLSANTFHNSIPESLGN-LVKLHYLNLSNNQFSQKIPNPI-EKLIHLSELDLSYKIFGEEIPS 547 (973)
Q Consensus 475 -----~~l~~l~~L~~L~Ls~N~i~~~~~~~l~~-l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~ls~n~i~~~~~~ 547 (973)
..+..+++|++|++++ .+++..+..+.. +++|++|+|++|.+++..+..+ ..+++|++|++++|.+++.+..
T Consensus 421 ~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~ 499 (594)
T 2p1m_B 421 DIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALL 499 (594)
T ss_dssp HHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHH
T ss_pred hhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHH
Confidence 2256678899999977 676655555655 7889999999999877655555 6688899999999988666555
Q ss_pred hh-cccccccccccccccccCccchhh-hccccccEEeCcCCC
Q 002069 548 QV-CSMQSLEKLNLSHNNLSGSISRCF-EEMHWLSCIDISYNA 588 (973)
Q Consensus 548 ~~-~~l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~l~l~~N~ 588 (973)
.+ ..+++|++|++++|+++..+...+ ..++.++...+..+.
T Consensus 500 ~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~ 542 (594)
T 2p1m_B 500 ANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERG 542 (594)
T ss_dssp HTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECSSS
T ss_pred HHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCCC
Confidence 33 358899999999998876655555 557777776666553
No 321
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.94 E-value=8.6e-30 Score=305.69 Aligned_cols=435 Identities=15% Similarity=0.116 Sum_probs=294.3
Q ss_pred ceeeccCCcCCCCCCCccccCCccceeecccccccc---cCcc------------cccccCCCCceecccCCCCCCCCcc
Q 002069 99 SDLRLSNNSLNGSIPSSLGNLTNLVTLYLHMNALSG---SIPD------------EIGNLKFLSDLQVSYNTLSGAIPFS 163 (973)
Q Consensus 99 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~---~~p~------------~~~~l~~L~~L~l~~N~l~~~~p~~ 163 (973)
+.++++..... ..+..+..+++|++|++++|.... ..|. .+..+++|++|++++|.+++..+..
T Consensus 46 ~~l~~~~~~~~-~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~ 124 (594)
T 2p1m_B 46 RKVFIGNCYAV-SPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLEL 124 (594)
T ss_dssp CEEEESSTTSS-CHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHH
T ss_pred eEEeecccccc-CHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHH
Confidence 45666554433 233456788999999999986321 1221 2346889999999999998766666
Q ss_pred cc-Cccccceeeeccc-ccCCC-CCccccccCccceeeccccccccccccccC----CCCcccEEecCCcccCCCCCccc
Q 002069 164 LG-NLTNLVTLYIGIN-ALSGS-IPNEIGNLKSLSDLRLDYNTLSGSILYSFG----NLTKLEILYLDVNALSGLIPNEI 236 (973)
Q Consensus 164 l~-~l~~L~~L~l~~n-~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~----~l~~L~~L~L~~n~i~~~~~~~~ 236 (973)
+. .+++|++|++++| .++.. ++..+.++++|++|++++|.+++..+..+. .+++|+.|++++|. ..+....+
T Consensus 125 l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~-~~~~~~~l 203 (594)
T 2p1m_B 125 IAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLA-SEVSFSAL 203 (594)
T ss_dssp HHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCC-SCCCHHHH
T ss_pred HHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccC-CcCCHHHH
Confidence 65 6899999999998 55522 444556899999999999998876554443 67799999999997 32323333
Q ss_pred ----cccccccceecccc-cccCCCCcccCCcchhhhccCCCcccCchhhhhhccccccceEEccc-------ccccCCc
Q 002069 237 ----GNLKSLLALQLNYN-TLSGSIPCSFGNLTKLVISCLGTNALSSSILEEIGNLKSLLHLQLNY-------NTLSGSI 304 (973)
Q Consensus 237 ----~~l~~L~~L~L~~N-~l~~~~~~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~L~l~~-------n~l~~~~ 304 (973)
.++++|+.|++++| .+++ . +..+..+++|++|++.. +.+.+ .
T Consensus 204 ~~l~~~~~~L~~L~L~~~~~~~~-l------------------------~~~~~~~~~L~~L~l~~~~~~~~~~~~~~-l 257 (594)
T 2p1m_B 204 ERLVTRCPNLKSLKLNRAVPLEK-L------------------------ATLLQRAPQLEELGTGGYTAEVRPDVYSG-L 257 (594)
T ss_dssp HHHHHHCTTCCEEECCTTSCHHH-H------------------------HHHHHHCTTCSEEECSBCCCCCCHHHHHH-H
T ss_pred HHHHHhCCCCcEEecCCCCcHHH-H------------------------HHHHhcCCcceEcccccccCccchhhHHH-H
Confidence 34588999999888 3322 2 23444556666666333 33332 3
Q ss_pred CchhhcCCcccee-eccccccCCCCCccccCCCCCCcEEcCCCCCCCcch-hccCCCCCCcEEEccCCcccCCCCcc-cc
Q 002069 305 PLSLGSLTNLATL-YFSTNALSGSIPNEITNLRSLSDLQLSENTLNGSIP-LALGNLTKLVSLDLSINKLSGSIPLS-FA 381 (973)
Q Consensus 305 ~~~~~~l~~L~~L-~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~i~~~~~~~-~~ 381 (973)
+..+.++++|+.| .+.+... ..++..+..+++|++|+|++|.+++... ..+..+++|++|++++| +++..... ..
T Consensus 258 ~~~l~~~~~L~~Ls~~~~~~~-~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~ 335 (594)
T 2p1m_B 258 SVALSGCKELRCLSGFWDAVP-AYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLAS 335 (594)
T ss_dssp HHHHHTCTTCCEEECCBTCCG-GGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHH
T ss_pred HHHHhcCCCcccccCCcccch-hhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHH
Confidence 3466777777777 3433322 2344445567788888888888664322 33567788888888877 44222222 23
Q ss_pred cccccchhccc---------ccccccCCCcccC-CCCCCCEEEccCCCCCCCcchhhhhhcccceEEEee--C----ccc
Q 002069 382 SLTSLTTLYLY---------ENSLCDSIPKEIG-DMKSLSILDLSSNKLNGSIPLSLANLTNSLKVLYLS--S----NHI 445 (973)
Q Consensus 382 ~l~~L~~L~L~---------~N~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~L~--~----n~l 445 (973)
.+++|++|+++ .+.+++.....+. .+++|++|+++.|.+++..+..+....++|+.|+++ + |.+
T Consensus 336 ~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l 415 (594)
T 2p1m_B 336 TCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYL 415 (594)
T ss_dssp HCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTT
T ss_pred hCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccc
Confidence 46778888773 3455543333333 378899998888888866666666545689999998 4 555
Q ss_pred cccc-----CCCCCCCcccceeeccCCccCCCCCccccc-ccccccccccccccccccCccc-cccccccEEeecCccCC
Q 002069 446 VGEI-----PLGHGKFSSLIQLILNNNELSGQLSPELGS-LNQLEYLDLSANTFHNSIPESL-GNLVKLHYLNLSNNQFS 518 (973)
Q Consensus 446 ~~~~-----~~~~~~~~~L~~L~l~~N~l~~~~~~~l~~-l~~L~~L~Ls~N~i~~~~~~~l-~~l~~L~~L~L~~N~l~ 518 (973)
++.. +..+..+++|+.|++++ .+++.....+.. +++|++|+|++|.+++..+..+ ..+++|++|+|++|+++
T Consensus 416 ~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~ 494 (594)
T 2p1m_B 416 TLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFG 494 (594)
T ss_dssp TCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCC
T ss_pred cCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCc
Confidence 5221 11145667899999987 666555555555 7889999999999987655555 66899999999999996
Q ss_pred CCCCc-ccccccccCeecccccccCCCcchhh-ccccccccccccccc
Q 002069 519 QKIPN-PIEKLIHLSELDLSYKIFGEEIPSQV-CSMQSLEKLNLSHNN 564 (973)
Q Consensus 519 ~~~~~-~~~~l~~L~~L~ls~n~i~~~~~~~~-~~l~~L~~L~L~~N~ 564 (973)
+.... .+..+++|+.|++++|.++..+...+ ..++.|+...+..+.
T Consensus 495 ~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~ 542 (594)
T 2p1m_B 495 DKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERG 542 (594)
T ss_dssp HHHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECSSS
T ss_pred HHHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCCC
Confidence 65444 44568999999999999876666666 457777766666554
No 322
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=2.5e-27 Score=274.47 Aligned_cols=245 Identities=19% Similarity=0.178 Sum_probs=149.4
Q ss_pred CCCcccCCCC----CCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCcccCCc
Q 002069 15 SIPPEIGHLT----HLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPN 90 (973)
Q Consensus 15 ~~p~~~~~l~----~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~ 90 (973)
.+|..+..+. +|++|+|++|.+++..|..|+.+++|++|+|++|.+++..| ++.+++|++|+|++|.+++ +|
T Consensus 21 ~l~~~l~~l~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~- 96 (487)
T 3oja_A 21 SLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQE-LL- 96 (487)
T ss_dssp THHHHHHTTSTTGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEE-EE-
T ss_pred hhHHHHHHhcccCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCC-CC-
Confidence 3455554443 67777777777776666677777777777777777764433 6777777777777777763 32
Q ss_pred cccCccccceeeccCCcCCCCCCCccccCCccceeecccccccccCcccccccCCCCceecccCCCCCCCCcccc-Cccc
Q 002069 91 EVGSLKSLSDLRLSNNSLNGSIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSGAIPFSLG-NLTN 169 (973)
Q Consensus 91 ~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~-~l~~ 169 (973)
..++|++|++++|++++..+. .+++|++|+|++|.+++..|..|+++++|++|+|++|.+++..|..+. .+++
T Consensus 97 ---~~~~L~~L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~ 170 (487)
T 3oja_A 97 ---VGPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDT 170 (487)
T ss_dssp ---ECTTCCEEECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTT
T ss_pred ---CCCCcCEEECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCc
Confidence 226677777777777644332 345666777777776666666666666666666666666655555554 5666
Q ss_pred cceeeecccccCCCCCccccccCccceeeccccccccccccccCCCCcccEEecCCcccCCCCCccccccccccceeccc
Q 002069 170 LVTLYIGINALSGSIPNEIGNLKSLSDLRLDYNTLSGSILYSFGNLTKLEILYLDVNALSGLIPNEIGNLKSLLALQLNY 249 (973)
Q Consensus 170 L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 249 (973)
|+.|+|++|.+++. | .+..+++|++|+|++|.++++++. |..+++|+.|+|++|.++++ |..+..+++|+.|++++
T Consensus 171 L~~L~Ls~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~l-p~~l~~l~~L~~L~l~~ 246 (487)
T 3oja_A 171 LEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAFMGPE-FQSAAGVTWISLRNNKLVLI-EKALRFSQNLEHFDLRG 246 (487)
T ss_dssp CCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCEECGG-GGGGTTCSEEECTTSCCCEE-CTTCCCCTTCCEEECTT
T ss_pred ccEEecCCCccccc-c-ccccCCCCCEEECCCCCCCCCCHh-HcCCCCccEEEecCCcCccc-chhhccCCCCCEEEcCC
Confidence 66666666666633 2 222456666666666666654443 55566666666666666543 44455555566666655
Q ss_pred ccccCCCCcccCCcchhhhccCCCcccCchhhhhhccccccceEEcc
Q 002069 250 NTLSGSIPCSFGNLTKLVISCLGTNALSSSILEEIGNLKSLLHLQLN 296 (973)
Q Consensus 250 N~l~~~~~~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~L~l~ 296 (973)
|.+.. ...+..+..++.|+.+++.
T Consensus 247 N~l~c-----------------------~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 247 NGFHC-----------------------GTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp CCBCH-----------------------HHHHHHHTTCHHHHHHHHH
T ss_pred CCCcC-----------------------cchHHHHHhCCCCcEEecc
Confidence 55541 2334556666666666654
No 323
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.94 E-value=8.9e-26 Score=242.13 Aligned_cols=222 Identities=22% Similarity=0.207 Sum_probs=142.7
Q ss_pred EEeCCCCCCCCCCCcccCCCCCCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCc
Q 002069 4 VLGLSFNQFSGSIPPEIGHLTHLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNL 83 (973)
Q Consensus 4 ~L~l~~~~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~ 83 (973)
..+-++.+++ .+|+.+. ++|++|+|++|++++..+..|..+++|++|++++|++.+..+..|+++++|++|++++|+
T Consensus 11 ~~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 87 (276)
T 2z62_A 11 TYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 87 (276)
T ss_dssp EEECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred eEEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCc
Confidence 3455666666 6777654 567888888888876666677778888888888888775555677778888888888888
Q ss_pred CcccCCccccCccccceeeccCCcCCCCCCCccccCCccceeeccccccccc-CcccccccCCCCceecccCCCCCCCCc
Q 002069 84 LSGSIPNEVGSLKSLSDLRLSNNSLNGSIPSSLGNLTNLVTLYLHMNALSGS-IPDEIGNLKFLSDLQVSYNTLSGAIPF 162 (973)
Q Consensus 84 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~p~ 162 (973)
+++..|..+..+++|++|++++|++.+..+..++++++|++|++++|++++. +|..|+++++|++|++++|++++..+.
T Consensus 88 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~ 167 (276)
T 2z62_A 88 IQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 167 (276)
T ss_dssp CCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGG
T ss_pred cCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHH
Confidence 7766667777777788888887777755555677777777777777777642 466777777777777777777655555
Q ss_pred cccCccccc----eeeecccccCCCCCccccccCccceeeccccccccccccccCCCCcccEEecCCcccC
Q 002069 163 SLGNLTNLV----TLYIGINALSGSIPNEIGNLKSLSDLRLDYNTLSGSILYSFGNLTKLEILYLDVNALS 229 (973)
Q Consensus 163 ~l~~l~~L~----~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~ 229 (973)
.+..+++|+ .|++++|++++..+. .....+|++|++++|+++++++..|..+++|+.|++++|.++
T Consensus 168 ~~~~l~~L~~l~l~L~ls~n~l~~~~~~-~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~ 237 (276)
T 2z62_A 168 DLRVLHQMPLLNLSLDLSLNPMNFIQPG-AFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWD 237 (276)
T ss_dssp GGHHHHTCTTCCEEEECCSSCCCEECTT-SSCSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBC
T ss_pred HhhhhhhccccceeeecCCCcccccCcc-ccCCCcccEEECCCCceeecCHhHhcccccccEEEccCCccc
Confidence 555555555 445555555432222 222224444444444444444444444444444444444444
No 324
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=2.1e-25 Score=239.25 Aligned_cols=224 Identities=24% Similarity=0.234 Sum_probs=195.0
Q ss_pred CEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCcccCCccccCccccceeeccCC
Q 002069 27 KLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSLSDLRLSNN 106 (973)
Q Consensus 27 ~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n 106 (973)
...+.++..++ .+|..+. ++|++|++++|++++..+..|+++++|++|++++|++++..+..+..+++|++|+|++|
T Consensus 10 ~~~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n 86 (276)
T 2z62_A 10 ITYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGN 86 (276)
T ss_dssp TEEECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTC
T ss_pred ceEEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCC
Confidence 35677777776 5677665 58999999999999666668999999999999999999777778999999999999999
Q ss_pred cCCCCCCCccccCCccceeecccccccccCcccccccCCCCceecccCCCCCC-CCccccCccccceeeecccccCCCCC
Q 002069 107 SLNGSIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSGA-IPFSLGNLTNLVTLYIGINALSGSIP 185 (973)
Q Consensus 107 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~-~p~~l~~l~~L~~L~l~~n~l~~~~p 185 (973)
++++..|..|.++++|++|++++|.+++..+..++++++|++|++++|.+++. +|..+.++++|++|++++|++++..+
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~ 166 (276)
T 2z62_A 87 PIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYC 166 (276)
T ss_dssp CCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECG
T ss_pred ccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCH
Confidence 99977778899999999999999999976676899999999999999999864 58899999999999999999997777
Q ss_pred ccccccCccc----eeeccccccccccccccCCCCcccEEecCCcccCCCCCccccccccccceecccccccC
Q 002069 186 NEIGNLKSLS----DLRLDYNTLSGSILYSFGNLTKLEILYLDVNALSGLIPNEIGNLKSLLALQLNYNTLSG 254 (973)
Q Consensus 186 ~~~~~l~~L~----~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~ 254 (973)
..+..+++|+ .|++++|+++++++..+... +|+.|++++|+++++.+..|.++++|+.|++++|+++.
T Consensus 167 ~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 238 (276)
T 2z62_A 167 TDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 238 (276)
T ss_dssp GGGHHHHTCTTCCEEEECCSSCCCEECTTSSCSC-CEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCC
T ss_pred HHhhhhhhccccceeeecCCCcccccCccccCCC-cccEEECCCCceeecCHhHhcccccccEEEccCCcccc
Confidence 7888888887 89999999998877766654 89999999999998887788999999999999999874
No 325
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=1.9e-26 Score=267.12 Aligned_cols=233 Identities=21% Similarity=0.198 Sum_probs=206.6
Q ss_pred CcEEeCCCCCCCCCCCcccCCCCCCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccC
Q 002069 2 LKVLGLSFNQFSGSIPPEIGHLTHLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGN 81 (973)
Q Consensus 2 l~~L~l~~~~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~ 81 (973)
|++|+|++|++++..|..|+.+++|++|+|++|.+++..| ++.+++|++|+|++|.++ .+|. .++|++|++++
T Consensus 36 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~-~l~~----~~~L~~L~L~~ 108 (487)
T 3oja_A 36 VKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQ-ELLV----GPSIETLHAAN 108 (487)
T ss_dssp CCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEE-EEEE----CTTCCEEECCS
T ss_pred ccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCC-CCCC----CCCcCEEECcC
Confidence 7899999999997667899999999999999999997655 999999999999999998 4443 38999999999
Q ss_pred CcCcccCCccccCccccceeeccCCcCCCCCCCccccCCccceeecccccccccCccccc-ccCCCCceecccCCCCCCC
Q 002069 82 NLLSGSIPNEVGSLKSLSDLRLSNNSLNGSIPSSLGNLTNLVTLYLHMNALSGSIPDEIG-NLKFLSDLQVSYNTLSGAI 160 (973)
Q Consensus 82 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~~ 160 (973)
|.+++..+. .+++|++|+|++|++++..|..++++++|++|+|++|.+++..|..+. .+++|++|+|++|.+++..
T Consensus 109 N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~ 185 (487)
T 3oja_A 109 NNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVK 185 (487)
T ss_dssp SCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEE
T ss_pred CcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcccccc
Confidence 999965443 468999999999999988888999999999999999999988888886 8999999999999999653
Q ss_pred CccccCccccceeeecccccCCCCCccccccCccceeeccccccccccccccCCCCcccEEecCCcccC-CCCCcccccc
Q 002069 161 PFSLGNLTNLVTLYIGINALSGSIPNEIGNLKSLSDLRLDYNTLSGSILYSFGNLTKLEILYLDVNALS-GLIPNEIGNL 239 (973)
Q Consensus 161 p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~-~~~~~~~~~l 239 (973)
+ +..+++|+.|+|++|.+++ +|..+..+++|+.|+|++|.++++ +..+..+++|+.|++++|.+. +..|..+..+
T Consensus 186 ~--~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~l-p~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~l 261 (487)
T 3oja_A 186 G--QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVLI-EKALRFSQNLEHFDLRGNGFHCGTLRDFFSKN 261 (487)
T ss_dssp C--CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCEE-CTTCCCCTTCCEEECTTCCBCHHHHHHHHTTC
T ss_pred c--cccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCccc-chhhccCCCCCEEEcCCCCCcCcchHHHHHhC
Confidence 3 4469999999999999995 556699999999999999999975 456899999999999999998 4457788889
Q ss_pred ccccceecc
Q 002069 240 KSLLALQLN 248 (973)
Q Consensus 240 ~~L~~L~L~ 248 (973)
++|+.++++
T Consensus 262 ~~L~~l~~~ 270 (487)
T 3oja_A 262 QRVQTVAKQ 270 (487)
T ss_dssp HHHHHHHHH
T ss_pred CCCcEEecc
Confidence 999999886
No 326
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.92 E-value=2.1e-24 Score=230.30 Aligned_cols=204 Identities=27% Similarity=0.290 Sum_probs=163.6
Q ss_pred CCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCcccCCccccCccccceeecc
Q 002069 25 HLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSLSDLRLS 104 (973)
Q Consensus 25 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~ 104 (973)
..+++++++++++ .+|..+. ++|++|++++|++++..+..|+++++|++|++++|+++...+..|..+++|++|+|+
T Consensus 17 ~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 4677888888887 4666554 578888888888875555678888888888888888874444445778888888888
Q ss_pred CCcCCCCCCCccccCCccceeecccccccccCcccccccCCCCceecccCCCCCCCCccccCccccceeeecccccCCCC
Q 002069 105 NNSLNGSIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSGAIPFSLGNLTNLVTLYIGINALSGSI 184 (973)
Q Consensus 105 ~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~ 184 (973)
+|++++..+..|.++++|++|+|++|++++..+..|+++++|++|++++|++++..+..|..+++|+.|++++|++++..
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 173 (270)
T 2o6q_A 94 DNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVP 173 (270)
T ss_dssp SSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeC
Confidence 88888655566788888888888888888767777888888888888888888766677888888888888888888766
Q ss_pred CccccccCccceeeccccccccccccccCCCCcccEEecCCcccCCC
Q 002069 185 PNEIGNLKSLSDLRLDYNTLSGSILYSFGNLTKLEILYLDVNALSGL 231 (973)
Q Consensus 185 p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~ 231 (973)
+..|.++++|++|++++|+++++++..|..+++|+.|++++|.+...
T Consensus 174 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 220 (270)
T 2o6q_A 174 EGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCT 220 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCS
T ss_pred hhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCC
Confidence 67788899999999999999988888888999999999999988765
No 327
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=2.7e-25 Score=237.48 Aligned_cols=230 Identities=25% Similarity=0.262 Sum_probs=181.5
Q ss_pred CCCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCcccCCccccCccccceeec
Q 002069 24 THLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSLSDLRL 103 (973)
Q Consensus 24 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L 103 (973)
..+..+++.++.+.+. ..+..+++|+.|++++|.++ .++ .++.+++|++|++++|.+++ + ..++.+++|++|+|
T Consensus 19 ~~l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~-~~~-~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L 92 (272)
T 3rfs_A 19 AETIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIK-SVQ-GIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLIL 92 (272)
T ss_dssp HHHHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCC-CCT-TGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEEC
T ss_pred HHHHHHHhcCcccccc--cccccccceeeeeeCCCCcc-ccc-ccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEEC
Confidence 4455566777766643 34667788888888888877 444 47788888888888888873 3 36778888888888
Q ss_pred cCCcCCCCCCCccccCCccceeecccccccccCcccccccCCCCceecccCCCCCCCCccccCccccceeeecccccCCC
Q 002069 104 SNNSLNGSIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSGAIPFSLGNLTNLVTLYIGINALSGS 183 (973)
Q Consensus 104 ~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~ 183 (973)
++|++++..|..|+++++|++|+|++|++++..+..|+++++|++|++++|++++..+..+..+++|+.|++++|++++.
T Consensus 93 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 172 (272)
T 3rfs_A 93 TGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSL 172 (272)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred CCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCcc
Confidence 88888866666678888888888888888866666688888888888888888877777788888888888888888877
Q ss_pred CCccccccCccceeeccccccccccccccCCCCcccEEecCCcccCCCCCccccccccccceecccccccCCCCcccCCc
Q 002069 184 IPNEIGNLKSLSDLRLDYNTLSGSILYSFGNLTKLEILYLDVNALSGLIPNEIGNLKSLLALQLNYNTLSGSIPCSFGNL 263 (973)
Q Consensus 184 ~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 263 (973)
.+..+..+++|++|++++|+++++++..|..+++|+.|++++|.+.+. +++|+.|+++.|.+++.+|.+++.+
T Consensus 173 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~~ 245 (272)
T 3rfs_A 173 PEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGSV 245 (272)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSCB
T ss_pred CHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCccccc
Confidence 677778888999999999998888888888899999999999987754 4578889999999998888888776
Q ss_pred chh
Q 002069 264 TKL 266 (973)
Q Consensus 264 ~~L 266 (973)
...
T Consensus 246 ~~~ 248 (272)
T 3rfs_A 246 APD 248 (272)
T ss_dssp CGG
T ss_pred CCC
Confidence 554
No 328
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.92 E-value=2.9e-24 Score=229.22 Aligned_cols=204 Identities=28% Similarity=0.308 Sum_probs=170.8
Q ss_pred CCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCcccCCccccCccccceeeccCCcCCCCCCCccccCCccceeec
Q 002069 48 SSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSLSDLRLSNNSLNGSIPSSLGNLTNLVTLYL 127 (973)
Q Consensus 48 ~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 127 (973)
.+.+++++++++++ .+|..+. ++|++|++++|++++..+..|+.+++|++|+|++|+++...+..|.++++|++|+|
T Consensus 16 ~~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l 92 (270)
T 2o6q_A 16 NNKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWV 92 (270)
T ss_dssp TTTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEEC
T ss_pred CCCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEEC
Confidence 45788899988888 6787665 67889999999988655567888889999999999888555556688889999999
Q ss_pred ccccccccCcccccccCCCCceecccCCCCCCCCccccCccccceeeecccccCCCCCccccccCccceeeccccccccc
Q 002069 128 HMNALSGSIPDEIGNLKFLSDLQVSYNTLSGAIPFSLGNLTNLVTLYIGINALSGSIPNEIGNLKSLSDLRLDYNTLSGS 207 (973)
Q Consensus 128 ~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 207 (973)
++|++++..+..|.++++|++|++++|++++..+..|..+++|++|++++|++++..+..|..+++|++|++++|+++++
T Consensus 93 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 172 (270)
T 2o6q_A 93 TDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRV 172 (270)
T ss_dssp CSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEe
Confidence 99988866667788889999999999998877778888889999999999988866666688888999999999998888
Q ss_pred cccccCCCCcccEEecCCcccCCCCCccccccccccceecccccccC
Q 002069 208 ILYSFGNLTKLEILYLDVNALSGLIPNEIGNLKSLLALQLNYNTLSG 254 (973)
Q Consensus 208 ~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~ 254 (973)
++..|.++++|+.|++++|+++++.+..|..+++|+.|+|++|.+..
T Consensus 173 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 173 PEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDC 219 (270)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred ChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeC
Confidence 88888888999999999999888877788888889999999988864
No 329
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=3.4e-24 Score=230.67 Aligned_cols=206 Identities=23% Similarity=0.228 Sum_probs=176.9
Q ss_pred ccCCCCCCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCcccCCccccCcccc
Q 002069 19 EIGHLTHLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSL 98 (973)
Q Consensus 19 ~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L 98 (973)
++..+++++++++++|+++ .+|..+. +++++|+|++|++++..|..|..+++|++|+|++|.+++ +|.. +.+++|
T Consensus 5 ~~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~-~~l~~L 79 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQVD-GTLPVL 79 (290)
T ss_dssp EEECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EECC-SCCTTC
T ss_pred cccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCc-ccCC-CCCCcC
Confidence 3678888999999999998 5676665 689999999999987777889999999999999999984 4443 788999
Q ss_pred ceeeccCCcCCCCCCCccccCCccceeecccccccccCcccccccCCCCceecccCCCCCCCCccccCccccceeeeccc
Q 002069 99 SDLRLSNNSLNGSIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSGAIPFSLGNLTNLVTLYIGIN 178 (973)
Q Consensus 99 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n 178 (973)
++|+|++|+++ .+|..+.++++|++|+|++|++++..|..|.++++|++|++++|++++..+..|..+++|+.|++++|
T Consensus 80 ~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 158 (290)
T 1p9a_G 80 GTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANN 158 (290)
T ss_dssp CEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTS
T ss_pred CEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCC
Confidence 99999999998 78888999999999999999999766788999999999999999999887888899999999999999
Q ss_pred ccCCCCCccccccCccceeeccccccccccccccCCCCcccEEecCCcccCCC
Q 002069 179 ALSGSIPNEIGNLKSLSDLRLDYNTLSGSILYSFGNLTKLEILYLDVNALSGL 231 (973)
Q Consensus 179 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~ 231 (973)
+++...+..|.++++|++|+|++|+++.++ ..+..+++|+.|+|++|.+...
T Consensus 159 ~l~~l~~~~~~~l~~L~~L~L~~N~l~~ip-~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 159 NLTELPAGLLNGLENLDTLLLQENSLYTIP-KGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCCCCCC-TTTTTTCCCSEEECCSCCBCCS
T ss_pred cCCccCHHHhcCcCCCCEEECCCCcCCccC-hhhcccccCCeEEeCCCCccCc
Confidence 999666667788999999999999999655 4556678999999999988753
No 330
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=2.8e-24 Score=231.27 Aligned_cols=204 Identities=26% Similarity=0.264 Sum_probs=184.0
Q ss_pred CccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCcccCCccccCccccceeeccCCcCCCCCCCccccCCcc
Q 002069 43 EIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSLSDLRLSNNSLNGSIPSSLGNLTNL 122 (973)
Q Consensus 43 ~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L 122 (973)
+++++++|+++++++|+++ .+|..+. +++++|+|++|++++..|..|..+++|++|+|++|++++ +|.. +.+++|
T Consensus 5 ~~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~-~~l~~L 79 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQVD-GTLPVL 79 (290)
T ss_dssp EEECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EECC-SCCTTC
T ss_pred cccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCc-ccCC-CCCCcC
Confidence 4778899999999999999 7887775 789999999999997778899999999999999999984 4443 889999
Q ss_pred ceeecccccccccCcccccccCCCCceecccCCCCCCCCccccCccccceeeecccccCCCCCccccccCccceeecccc
Q 002069 123 VTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSGAIPFSLGNLTNLVTLYIGINALSGSIPNEIGNLKSLSDLRLDYN 202 (973)
Q Consensus 123 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N 202 (973)
++|+|++|+++ .+|..+.++++|++|++++|++++..|..|.++++|++|++++|++++..+..|..+++|+.|+|++|
T Consensus 80 ~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 158 (290)
T 1p9a_G 80 GTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANN 158 (290)
T ss_dssp CEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTS
T ss_pred CEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCC
Confidence 99999999998 78889999999999999999999888889999999999999999999777777899999999999999
Q ss_pred ccccccccccCCCCcccEEecCCcccCCCCCccccccccccceeccccccc
Q 002069 203 TLSGSILYSFGNLTKLEILYLDVNALSGLIPNEIGNLKSLLALQLNYNTLS 253 (973)
Q Consensus 203 ~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~ 253 (973)
+++.+++..|..+++|+.|+|++|+++.+ |..+....+|+.|+|++|.+.
T Consensus 159 ~l~~l~~~~~~~l~~L~~L~L~~N~l~~i-p~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 159 NLTELPAGLLNGLENLDTLLLQENSLYTI-PKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCCCCC-CTTTTTTCCCSEEECCSCCBC
T ss_pred cCCccCHHHhcCcCCCCEEECCCCcCCcc-ChhhcccccCCeEEeCCCCcc
Confidence 99998888899999999999999999976 666777789999999999885
No 331
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=6.9e-25 Score=234.27 Aligned_cols=225 Identities=24% Similarity=0.262 Sum_probs=196.6
Q ss_pred EeCCCCCCCCCCCcccCCCCCCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcC
Q 002069 5 LGLSFNQFSGSIPPEIGHLTHLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLL 84 (973)
Q Consensus 5 L~l~~~~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l 84 (973)
+++..+.+... ..+..+++|++|++++|.++. + ..+..+++|++|++++|++++ + +.++.+++|++|++++|.+
T Consensus 24 l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l 97 (272)
T 3rfs_A 24 ANLKKKSVTDA--VTQNELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQL 97 (272)
T ss_dssp HHHTCSCTTSE--ECHHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCC
T ss_pred HHhcCcccccc--cccccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCcc
Confidence 45566666522 446688999999999999984 3 468999999999999999984 4 4799999999999999999
Q ss_pred cccCCccccCccccceeeccCCcCCCCCCCccccCCccceeecccccccccCcccccccCCCCceecccCCCCCCCCccc
Q 002069 85 SGSIPNEVGSLKSLSDLRLSNNSLNGSIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSGAIPFSL 164 (973)
Q Consensus 85 ~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l 164 (973)
++..|..++.+++|++|++++|++++..|..|+++++|++|++++|++++..+..|+++++|++|++++|++++..+..+
T Consensus 98 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 177 (272)
T 3rfs_A 98 QSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVF 177 (272)
T ss_dssp CCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTT
T ss_pred CccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHh
Confidence 97666778999999999999999997777778999999999999999997777778999999999999999998888888
Q ss_pred cCccccceeeecccccCCCCCccccccCccceeeccccccccccccccCCCCcccEEecCCcccCCCCCccccccccc
Q 002069 165 GNLTNLVTLYIGINALSGSIPNEIGNLKSLSDLRLDYNTLSGSILYSFGNLTKLEILYLDVNALSGLIPNEIGNLKSL 242 (973)
Q Consensus 165 ~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L 242 (973)
+.+++|+.|++++|++++..|..+..+++|++|++++|.+. +.+++|+.|+++.|.+++..|..++.+...
T Consensus 178 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~-------~~~~~l~~l~~~~n~~~g~ip~~~~~~~~~ 248 (272)
T 3rfs_A 178 DKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWD-------CTCPGIRYLSEWINKHSGVVRNSAGSVAPD 248 (272)
T ss_dssp TTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC-------CCTTTTHHHHHHHHHTGGGBBCTTSCBCGG
T ss_pred cCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcc-------ccCcHHHHHHHHHHhCCCcccCcccccCCC
Confidence 99999999999999999888888999999999999999887 346789999999999999889888877653
No 332
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.91 E-value=7.8e-26 Score=252.49 Aligned_cols=106 Identities=24% Similarity=0.163 Sum_probs=52.1
Q ss_pred EEcccccccCCcCchhhcCCccceeeccccccCCCCC----ccccCCC-CCCcEEcCCCCCCCcchhccCCC-----CCC
Q 002069 293 LQLNYNTLSGSIPLSLGSLTNLATLYFSTNALSGSIP----NEITNLR-SLSDLQLSENTLNGSIPLALGNL-----TKL 362 (973)
Q Consensus 293 L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~----~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l-----~~L 362 (973)
+++++|.+++.+|..+...++|++|++++|.+++..+ ..+..++ +|++|+|++|.+++..+..+..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 4555555555555544444445555555555554443 4444454 55555555555554444444332 555
Q ss_pred cEEEccCCcccCCCCcccccc-----cccchhccccccccc
Q 002069 363 VSLDLSINKLSGSIPLSFASL-----TSLTTLYLYENSLCD 398 (973)
Q Consensus 363 ~~L~Ls~N~i~~~~~~~~~~l-----~~L~~L~L~~N~l~~ 398 (973)
++|+|++|++++..+..+... ++|++|+|++|++++
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~ 123 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSS 123 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGG
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCc
Confidence 555555555554444333222 344444444444443
No 333
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.91 E-value=7e-25 Score=255.87 Aligned_cols=187 Identities=14% Similarity=0.173 Sum_probs=148.0
Q ss_pred cccccccCCCceeEEEEEcCCCCEEEEEEcCCCCCcc-----hhhHHHHHHHHHHhhcCCCCceeeeceeeeccceeEEE
Q 002069 704 DDEHCIGNGGQGSVYKAELPTGEIVAVKKFHSPLPGE-----MACQQEFLNEGNALTKIRHRNIVKFYGFCSHALHSFVV 778 (973)
Q Consensus 704 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~lv 778 (973)
...+.||+|+||+||+|.. .++.+|+|+........ ....+.+.+|++++++++||||+++..++...+..++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 3457899999999999965 67889999865432221 11245689999999999999999777777777788999
Q ss_pred EEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccC
Q 002069 779 YEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKL 858 (973)
Q Consensus 779 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 858 (973)
|||+++++|.++++. +..++.|++.|++|||++ +|+||||||+||+++. .+||+|||+++....
T Consensus 418 mE~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~ 481 (540)
T 3en9_A 418 MSYINGKLAKDVIED-----------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNL 481 (540)
T ss_dssp EECCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCC
T ss_pred EECCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCC
Confidence 999999999999864 568999999999999999 9999999999999998 999999999998754
Q ss_pred CCCc-------ccccccccCccccccccc--CCCCCccchHHHHHHHHHHHhCCCCCc
Q 002069 859 GLSN-------RTELAGTFGYIAPELAYT--MKVTEKCDVYSFGVLALEVIKGKHPRD 907 (973)
Q Consensus 859 ~~~~-------~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~tg~~p~~ 907 (973)
.... .....||+.|||||++.. ..|+..+|+|+..+-..+-+.++.+|.
T Consensus 482 ~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 482 DEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred ccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 3221 135679999999999986 567888999999999888888777653
No 334
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.91 E-value=1.4e-25 Score=250.48 Aligned_cols=255 Identities=18% Similarity=0.184 Sum_probs=128.1
Q ss_pred eeccccccCCCCCccccCCCCCCcEEcCCCCCCCcch----hccCCCC-CCcEEEccCCcccCCCCcccccc-----ccc
Q 002069 317 LYFSTNALSGSIPNEITNLRSLSDLQLSENTLNGSIP----LALGNLT-KLVSLDLSINKLSGSIPLSFASL-----TSL 386 (973)
Q Consensus 317 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~----~~~~~l~-~L~~L~Ls~N~i~~~~~~~~~~l-----~~L 386 (973)
+.++.|.+++.+|..+...++|++|+|++|.+++..+ ..+.+++ +|++|+|++|+|++..+..|..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 4556666665555555555556666666666665544 5555565 56666666666665555555554 556
Q ss_pred chhcccccccccCCCcccC----CC-CCCCEEEccCCCCCCCcchhhhhh----cccceEEEeeCcccccccCCCCCCCc
Q 002069 387 TTLYLYENSLCDSIPKEIG----DM-KSLSILDLSSNKLNGSIPLSLANL----TNSLKVLYLSSNHIVGEIPLGHGKFS 457 (973)
Q Consensus 387 ~~L~L~~N~l~~~~~~~~~----~l-~~L~~L~Ls~N~l~~~~~~~~~~~----~~~L~~L~L~~n~l~~~~~~~~~~~~ 457 (973)
++|+|++|++++..+..+. .+ ++|++|+|++|++++..+..+... ..+|++|+|++|.+++.....+
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l---- 158 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDEL---- 158 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHH----
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHH----
Confidence 6666666665554444322 22 556666666666554444443332 2245555555555553222111
Q ss_pred ccceeeccCCccCCCCCccccccc-ccccccccccccccccCccccc----c-ccccEEeecCccCCCCCCc----cccc
Q 002069 458 SLIQLILNNNELSGQLSPELGSLN-QLEYLDLSANTFHNSIPESLGN----L-VKLHYLNLSNNQFSQKIPN----PIEK 527 (973)
Q Consensus 458 ~L~~L~l~~N~l~~~~~~~l~~l~-~L~~L~Ls~N~i~~~~~~~l~~----l-~~L~~L~L~~N~l~~~~~~----~~~~ 527 (973)
+..+..++ +|++|+|++|.|++..+..+.. + ++|++|+|++|+|++.... .+..
T Consensus 159 ----------------~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~ 222 (362)
T 3goz_A 159 ----------------IQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSS 222 (362)
T ss_dssp ----------------HHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHH
T ss_pred ----------------HHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhc
Confidence 11222222 4555555555554443332222 2 3555555555555443222 2222
Q ss_pred -ccccCeecccccccCCCcchh----hcccccccccccccccccCccc-------hhhhccccccEEeCcCCCCCC
Q 002069 528 -LIHLSELDLSYKIFGEEIPSQ----VCSMQSLEKLNLSHNNLSGSIS-------RCFEEMHWLSCIDISYNALQG 591 (973)
Q Consensus 528 -l~~L~~L~ls~n~i~~~~~~~----~~~l~~L~~L~L~~N~l~~~~~-------~~~~~l~~L~~l~l~~N~l~~ 591 (973)
.++|++||+++|.|++.++.. +..+++|++|+|++|.+.+..+ ..+..++.|+.||+++|++..
T Consensus 223 ~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~ 298 (362)
T 3goz_A 223 IPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHP 298 (362)
T ss_dssp SCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCG
T ss_pred CCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCC
Confidence 235555555555555544422 2234556666666665443322 234455566666666666543
No 335
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.90 E-value=5.7e-24 Score=222.65 Aligned_cols=196 Identities=20% Similarity=0.203 Sum_probs=121.5
Q ss_pred CCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCc-CcccCCccccCccccceeeccC-CcCCCCCCCccccCCccceee
Q 002069 49 SLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNL-LSGSIPNEVGSLKSLSDLRLSN-NSLNGSIPSSLGNLTNLVTLY 126 (973)
Q Consensus 49 ~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~-l~~~~p~~~~~l~~L~~L~L~~-n~l~~~~p~~~~~l~~L~~L~ 126 (973)
+|++|++++|++++..+..|+++++|++|++++|+ ++...+..|..+++|++|++++ |++++..+..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 56666666666654333456666666666666664 5533334556666666666665 666644445566666666666
Q ss_pred cccccccccCcccccccCCCC---ceecccC-CCCCCCCccccCccccc-eeeecccccCCCCCccccccCccceeeccc
Q 002069 127 LHMNALSGSIPDEIGNLKFLS---DLQVSYN-TLSGAIPFSLGNLTNLV-TLYIGINALSGSIPNEIGNLKSLSDLRLDY 201 (973)
Q Consensus 127 L~~n~l~~~~p~~~~~l~~L~---~L~l~~N-~l~~~~p~~l~~l~~L~-~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~ 201 (973)
+++|++++ +|+ |+++++|+ +|++++| .+++..+..|.++++|+ .|++++|+++ .+|......++|++|++++
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~ 188 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNK 188 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECTT
T ss_pred CCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCC
Confidence 66666653 444 55666665 6666666 66655555666677777 7777777766 3443333336777777777
Q ss_pred cc-cccccccccCCC-CcccEEecCCcccCCCCCccccccccccceecccc
Q 002069 202 NT-LSGSILYSFGNL-TKLEILYLDVNALSGLIPNEIGNLKSLLALQLNYN 250 (973)
Q Consensus 202 N~-l~~~~~~~~~~l-~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N 250 (973)
|+ ++.+++..|.++ ++|+.|++++|+++++++. .+++|+.|+++++
T Consensus 189 n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 189 NKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp CTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred CCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 74 777767777777 7777777777777766443 4556666766654
No 336
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.90 E-value=3.2e-25 Score=245.44 Aligned_cols=253 Identities=19% Similarity=0.216 Sum_probs=192.1
Q ss_pred CcEEeCCCCCCCCCCCcccCCC--CCCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCC-CCCcccCCCCCcEEE
Q 002069 2 LKVLGLSFNQFSGSIPPEIGHL--THLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGS-IPPSLGNLTSLIYID 78 (973)
Q Consensus 2 l~~L~l~~~~l~~~~p~~~~~l--~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~-~p~~~~~l~~L~~L~ 78 (973)
++.+|++++++. |..+..+ +++++|++++|.+.+..| .+..+++|++|++++|.+.+. +|..+..+++|++|+
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~-~~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~ 124 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLA-EHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLS 124 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCC-SCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEE
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccch-hhccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEe
Confidence 567888888775 4666777 888888888888886644 466788888888888888754 777788888888888
Q ss_pred ccCCcCcccCCccccCccccceeeccCC-cCCC-CCCCccccCCccceeecccc-ccccc-CcccccccC-CCCceeccc
Q 002069 79 IGNNLLSGSIPNEVGSLKSLSDLRLSNN-SLNG-SIPSSLGNLTNLVTLYLHMN-ALSGS-IPDEIGNLK-FLSDLQVSY 153 (973)
Q Consensus 79 l~~n~l~~~~p~~~~~l~~L~~L~L~~n-~l~~-~~p~~~~~l~~L~~L~L~~n-~l~~~-~p~~~~~l~-~L~~L~l~~ 153 (973)
+++|.+++..|..++.+++|++|+|++| .+++ .+|..+.++++|++|++++| .+++. ++..+..++ +|++|++++
T Consensus 125 L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~ 204 (336)
T 2ast_B 125 LEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSG 204 (336)
T ss_dssp CTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCS
T ss_pred CcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCC
Confidence 8888888777788888888888888888 5664 25666778888888888888 77743 567788888 888888888
Q ss_pred C--CCC-CCCCccccCccccceeeecccc-cCCCCCccccccCccceeeccccc-cccccccccCCCCcccEEecCCccc
Q 002069 154 N--TLS-GAIPFSLGNLTNLVTLYIGINA-LSGSIPNEIGNLKSLSDLRLDYNT-LSGSILYSFGNLTKLEILYLDVNAL 228 (973)
Q Consensus 154 N--~l~-~~~p~~l~~l~~L~~L~l~~n~-l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~L~~n~i 228 (973)
| .++ +.+|..+..+++|+.|++++|. +++..+..+.++++|++|++++|. +.......+.++++|+.|++++| +
T Consensus 205 ~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i 283 (336)
T 2ast_B 205 YRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-V 283 (336)
T ss_dssp CGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-S
T ss_pred CcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-c
Confidence 8 454 3456677788888888888888 666667788888888888888884 43333346778888888888888 3
Q ss_pred CCCCCccccccc-cccceecccccccCCCCcccCC
Q 002069 229 SGLIPNEIGNLK-SLLALQLNYNTLSGSIPCSFGN 262 (973)
Q Consensus 229 ~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~ 262 (973)
+ ...+..+. ++..|++++|++++..|..++.
T Consensus 284 ~---~~~~~~l~~~l~~L~l~~n~l~~~~~~~~~~ 315 (336)
T 2ast_B 284 P---DGTLQLLKEALPHLQINCSHFTTIARPTIGN 315 (336)
T ss_dssp C---TTCHHHHHHHSTTSEESCCCSCCTTCSSCSS
T ss_pred C---HHHHHHHHhhCcceEEecccCccccCCcccc
Confidence 3 34555553 4778888888888877776654
No 337
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.90 E-value=7.1e-24 Score=221.90 Aligned_cols=196 Identities=18% Similarity=0.204 Sum_probs=96.4
Q ss_pred CCCEEECCCCcccccCCcCccCCCCCCeeeccCCc-CCCCCCCcccCCCCCcEEEccC-CcCcccCCccccCccccceee
Q 002069 25 HLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNF-LKGSIPPSLGNLTSLIYIDIGN-NLLSGSIPNEVGSLKSLSDLR 102 (973)
Q Consensus 25 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~-~~~~~p~~~~~l~~L~~L~l~~-n~l~~~~p~~~~~l~~L~~L~ 102 (973)
+|++|++++|++++..+..|..+++|++|++++|+ +++..+..|.++++|++|++++ |++++..+..|..+++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 45555555555554444445555555555555554 4433333455555555555555 555533334455555555555
Q ss_pred ccCCcCCCCCCCccccCCccc---eeecccc-cccccCcccccccCCCC-ceecccCCCCCCCCccccCccccceeeecc
Q 002069 103 LSNNSLNGSIPSSLGNLTNLV---TLYLHMN-ALSGSIPDEIGNLKFLS-DLQVSYNTLSGAIPFSLGNLTNLVTLYIGI 177 (973)
Q Consensus 103 L~~n~l~~~~p~~~~~l~~L~---~L~L~~n-~l~~~~p~~~~~l~~L~-~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~ 177 (973)
+++|++++ +|. +..+++|+ +|++++| ++++..+..|.++++|+ +|++++|+++...+..+.. ++|+.|++++
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~~ 188 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLNK 188 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECTT
T ss_pred CCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcCC
Confidence 55555552 443 44555554 5555555 55543334455555555 5555555555222222332 4555555555
Q ss_pred cc-cCCCCCcccccc-CccceeeccccccccccccccCCCCcccEEecCCc
Q 002069 178 NA-LSGSIPNEIGNL-KSLSDLRLDYNTLSGSILYSFGNLTKLEILYLDVN 226 (973)
Q Consensus 178 n~-l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n 226 (973)
|+ ++...+..|.++ ++|++|++++|++++++.. .+++|+.|+++++
T Consensus 189 n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 189 NKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp CTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred CCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 53 553334445555 5555555555555544332 3344445554443
No 338
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=3.4e-23 Score=225.85 Aligned_cols=225 Identities=16% Similarity=0.137 Sum_probs=184.1
Q ss_pred CCCCEEECCCCcccccCCc---CccCCCCCCeeeccCCcCCCCCCCcc--cCCCCCcEEEccCCcCcccCC----ccccC
Q 002069 24 THLKLLSFSKNQLSGLIPH---EIGRLSSLNGLSLYSNFLKGSIPPSL--GNLTSLIYIDIGNNLLSGSIP----NEVGS 94 (973)
Q Consensus 24 ~~L~~L~l~~n~l~~~~p~---~~~~l~~L~~L~l~~n~~~~~~p~~~--~~l~~L~~L~l~~n~l~~~~p----~~~~~ 94 (973)
..++.|.+.++.++...-. .+..+++|++|++++|++.+..|..+ +.+++|++|+|++|.+++..| ..+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 3478889988887532000 12335779999999999998899888 899999999999999986555 34567
Q ss_pred ccccceeeccCCcCCCCCCCccccCCccceeeccccccccc--C--cccccccCCCCceecccCCCCCCCCc----cccC
Q 002069 95 LKSLSDLRLSNNSLNGSIPSSLGNLTNLVTLYLHMNALSGS--I--PDEIGNLKFLSDLQVSYNTLSGAIPF----SLGN 166 (973)
Q Consensus 95 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~--~--p~~~~~l~~L~~L~l~~N~l~~~~p~----~l~~ 166 (973)
+++|++|+|++|++.+..|..|+++++|++|+|++|++.+. + +..++.+++|++|++++|+++ .++. .+..
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~ 222 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAA 222 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHH
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhc
Confidence 89999999999999987888999999999999999997642 2 233578999999999999997 3333 3578
Q ss_pred ccccceeeecccccCCCCCcccccc---CccceeeccccccccccccccCCCCcccEEecCCcccCCCCCcccccccccc
Q 002069 167 LTNLVTLYIGINALSGSIPNEIGNL---KSLSDLRLDYNTLSGSILYSFGNLTKLEILYLDVNALSGLIPNEIGNLKSLL 243 (973)
Q Consensus 167 l~~L~~L~l~~n~l~~~~p~~~~~l---~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~ 243 (973)
+++|++|++++|++++..|..+..+ ++|++|+|++|+++.++. .+. ++|+.|+|++|+++++ |. +..+++|+
T Consensus 223 l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~~lp~-~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~ 297 (310)
T 4glp_A 223 GVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQVPK-GLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVD 297 (310)
T ss_dssp TCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCCSCCS-CCC--SCCSCEECCSCCCCSC-CC-TTSCCCCS
T ss_pred CCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCCchhh-hhc--CCCCEEECCCCcCCCC-ch-hhhCCCcc
Confidence 8999999999999998778888877 699999999999996644 443 8999999999999986 33 78889999
Q ss_pred ceecccccccC
Q 002069 244 ALQLNYNTLSG 254 (973)
Q Consensus 244 ~L~L~~N~l~~ 254 (973)
.|+|++|+++.
T Consensus 298 ~L~L~~N~l~~ 308 (310)
T 4glp_A 298 NLTLDGNPFLV 308 (310)
T ss_dssp CEECSSTTTSC
T ss_pred EEECcCCCCCC
Confidence 99999999863
No 339
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.89 E-value=2.5e-22 Score=211.70 Aligned_cols=176 Identities=24% Similarity=0.229 Sum_probs=99.8
Q ss_pred cEEeCCCCCCCCCCCcccCCCCCCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCC
Q 002069 3 KVLGLSFNQFSGSIPPEIGHLTHLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNN 82 (973)
Q Consensus 3 ~~L~l~~~~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n 82 (973)
+++++++++++ .+|..+. +++++|+|++|++++..|..|..+++|++|+|++|++++..|..|..+++|++|+|++|
T Consensus 17 ~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 93 (251)
T 3m19_A 17 KEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANN 93 (251)
T ss_dssp TEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTS
T ss_pred eEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCC
Confidence 45566666665 5665544 45666666666666555555666666666666666666555555566666666666666
Q ss_pred cCcccCCccccCccccceeeccCCcCCCCCCCccccCCccceeecccccccccCcccccccCCCCceecccCCCCCCCCc
Q 002069 83 LLSGSIPNEVGSLKSLSDLRLSNNSLNGSIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSGAIPF 162 (973)
Q Consensus 83 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 162 (973)
++++..|..|+.+++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|+++++|++|+|++|++++..+.
T Consensus 94 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 173 (251)
T 3m19_A 94 QLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHG 173 (251)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred cccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHH
Confidence 66544444555556666666666666543334455555666666665555544444555555555555555555544444
Q ss_pred cccCccccceeeecccccC
Q 002069 163 SLGNLTNLVTLYIGINALS 181 (973)
Q Consensus 163 ~l~~l~~L~~L~l~~n~l~ 181 (973)
.|..+++|+.|++++|.+.
T Consensus 174 ~~~~l~~L~~L~l~~N~~~ 192 (251)
T 3m19_A 174 AFDRLGKLQTITLFGNQFD 192 (251)
T ss_dssp TTTTCTTCCEEECCSCCBC
T ss_pred HHhCCCCCCEEEeeCCcee
Confidence 5555555555555555554
No 340
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.89 E-value=5.7e-23 Score=223.39 Aligned_cols=192 Identities=29% Similarity=0.449 Sum_probs=92.8
Q ss_pred CCCCCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCcccCCccccCcccccee
Q 002069 22 HLTHLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSLSDL 101 (973)
Q Consensus 22 ~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L 101 (973)
.+.+|++|++++|.++. +| .+..+++|++|++++|+++ .+|. ++.+++|++|++++|+++ .+| .+..+++|++|
T Consensus 39 ~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~-~~~~-~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L 112 (308)
T 1h6u_A 39 DLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQIT-DLAP-LKNLTKITELELSGNPLK-NVS-AIAGLQSIKTL 112 (308)
T ss_dssp HHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCC-CCGG-GTTCCSCCEEECCSCCCS-CCG-GGTTCTTCCEE
T ss_pred HcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCC-CChh-HccCCCCCEEEccCCcCC-Cch-hhcCCCCCCEE
Confidence 34455555555555542 23 3445555555555555554 2333 455555555555555554 222 34445555555
Q ss_pred eccCCcCCCCCCCccccCCccceeecccccccccCcccccccCCCCceecccCCCCCCCCccccCccccceeeecccccC
Q 002069 102 RLSNNSLNGSIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSGAIPFSLGNLTNLVTLYIGINALS 181 (973)
Q Consensus 102 ~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~ 181 (973)
++++|++++ +|. +..+++|++|++++|+++ +..+ +..+++|+.|++++|+++
T Consensus 113 ~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~------------------------~~~~--l~~l~~L~~L~l~~n~l~ 164 (308)
T 1h6u_A 113 DLTSTQITD-VTP-LAGLSNLQVLYLDLNQIT------------------------NISP--LAGLTNLQYLSIGNAQVS 164 (308)
T ss_dssp ECTTSCCCC-CGG-GTTCTTCCEEECCSSCCC------------------------CCGG--GGGCTTCCEEECCSSCCC
T ss_pred ECCCCCCCC-chh-hcCCCCCCEEECCCCccC------------------------cCcc--ccCCCCccEEEccCCcCC
Confidence 555555542 222 444445555555555444 3222 444445555555555444
Q ss_pred CCCCccccccCccceeeccccccccccccccCCCCcccEEecCCcccCCCCCccccccccccceeccccccc
Q 002069 182 GSIPNEIGNLKSLSDLRLDYNTLSGSILYSFGNLTKLEILYLDVNALSGLIPNEIGNLKSLLALQLNYNTLS 253 (973)
Q Consensus 182 ~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~ 253 (973)
+ ++. +..+++|++|++++|+++++.+ +..+++|+.|++++|+++++. .+..+++|+.|++++|+++
T Consensus 165 ~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~ 230 (308)
T 1h6u_A 165 D-LTP-LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTIT 230 (308)
T ss_dssp C-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEE
T ss_pred C-Chh-hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeee
Confidence 2 222 4455555555555555554332 455555555555555555442 2555555555555555554
No 341
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=3.5e-23 Score=225.70 Aligned_cols=223 Identities=18% Similarity=0.163 Sum_probs=186.8
Q ss_pred CcEEeCCCCCCCCC-CCc--ccCCCCCCCEEECCCCcccccCCcCc--cCCCCCCeeeccCCcCCCCCC----CcccCCC
Q 002069 2 LKVLGLSFNQFSGS-IPP--EIGHLTHLKLLSFSKNQLSGLIPHEI--GRLSSLNGLSLYSNFLKGSIP----PSLGNLT 72 (973)
Q Consensus 2 l~~L~l~~~~l~~~-~p~--~~~~l~~L~~L~l~~n~l~~~~p~~~--~~l~~L~~L~l~~n~~~~~~p----~~~~~l~ 72 (973)
++.|+++++.++.. +.. ....+++|++|+|++|.+++..|..+ ..+++|++|+|++|++.+..| ..+..++
T Consensus 66 l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~ 145 (310)
T 4glp_A 66 VRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKP 145 (310)
T ss_dssp CCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCS
T ss_pred eeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhcc
Confidence 46677777776521 111 12245679999999999999999988 899999999999999997655 4456799
Q ss_pred CCcEEEccCCcCcccCCccccCccccceeeccCCcCCCC--C--CCccccCCccceeecccccccccCcc----cccccC
Q 002069 73 SLIYIDIGNNLLSGSIPNEVGSLKSLSDLRLSNNSLNGS--I--PSSLGNLTNLVTLYLHMNALSGSIPD----EIGNLK 144 (973)
Q Consensus 73 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~--~--p~~~~~l~~L~~L~L~~n~l~~~~p~----~~~~l~ 144 (973)
+|++|+|++|++++..|..++.+++|++|+|++|++.+. + +..++.+++|++|+|++|+++ .++. .+++++
T Consensus 146 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~ 224 (310)
T 4glp_A 146 GLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGV 224 (310)
T ss_dssp CCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTC
T ss_pred CCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCC
Confidence 999999999999977788999999999999999998642 2 334578999999999999997 4444 367889
Q ss_pred CCCceecccCCCCCCCCccccCc---cccceeeecccccCCCCCccccccCccceeeccccccccccccccCCCCcccEE
Q 002069 145 FLSDLQVSYNTLSGAIPFSLGNL---TNLVTLYIGINALSGSIPNEIGNLKSLSDLRLDYNTLSGSILYSFGNLTKLEIL 221 (973)
Q Consensus 145 ~L~~L~l~~N~l~~~~p~~l~~l---~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 221 (973)
+|++|+|++|++++..|..+..+ ++|++|++++|+++ .+|..+. ++|++|+|++|++++++. +..+++|+.|
T Consensus 225 ~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L 299 (310)
T 4glp_A 225 QPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRAPQ--PDELPEVDNL 299 (310)
T ss_dssp CCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSCCC--TTSCCCCSCE
T ss_pred CCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCCch--hhhCCCccEE
Confidence 99999999999998878888777 69999999999999 6788775 899999999999997643 7889999999
Q ss_pred ecCCcccCC
Q 002069 222 YLDVNALSG 230 (973)
Q Consensus 222 ~L~~n~i~~ 230 (973)
++++|.++.
T Consensus 300 ~L~~N~l~~ 308 (310)
T 4glp_A 300 TLDGNPFLV 308 (310)
T ss_dssp ECSSTTTSC
T ss_pred ECcCCCCCC
Confidence 999999975
No 342
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=1.9e-25 Score=252.11 Aligned_cols=93 Identities=24% Similarity=0.238 Sum_probs=43.7
Q ss_pred cCchhhcCCccceeeccccccCCCCC----ccccCCCCCCcEEcCCCCCC---Ccchhcc-------CCCCCCcEEEccC
Q 002069 304 IPLSLGSLTNLATLYFSTNALSGSIP----NEITNLRSLSDLQLSENTLN---GSIPLAL-------GNLTKLVSLDLSI 369 (973)
Q Consensus 304 ~~~~~~~l~~L~~L~L~~n~l~~~~~----~~~~~l~~L~~L~L~~N~l~---~~~~~~~-------~~l~~L~~L~Ls~ 369 (973)
++..+..+++|++|+|++|.++...+ ..+..+++|++|+|++|.+. +.+|..+ ..+++|++|+|++
T Consensus 24 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~ 103 (386)
T 2ca6_A 24 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSD 103 (386)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCS
T ss_pred HHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCC
Confidence 44455555666666666666554322 22445555555555554332 2223222 4455555555555
Q ss_pred CcccC----CCCcccccccccchhccccccc
Q 002069 370 NKLSG----SIPLSFASLTSLTTLYLYENSL 396 (973)
Q Consensus 370 N~i~~----~~~~~~~~l~~L~~L~L~~N~l 396 (973)
|++++ ..+..+..+++|++|+|++|.+
T Consensus 104 n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l 134 (386)
T 2ca6_A 104 NAFGPTAQEPLIDFLSKHTPLEHLYLHNNGL 134 (386)
T ss_dssp CCCCTTTHHHHHHHHHHCTTCCEEECCSSCC
T ss_pred CcCCHHHHHHHHHHHHhCCCCCEEECcCCCC
Confidence 55543 1233333444444444444444
No 343
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.88 E-value=1e-22 Score=225.95 Aligned_cols=216 Identities=20% Similarity=0.139 Sum_probs=101.7
Q ss_pred EEeCCCCCCCCCCCcccCCCCCCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCC-CcccCCCCCcE-EEccC
Q 002069 4 VLGLSFNQFSGSIPPEIGHLTHLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIP-PSLGNLTSLIY-IDIGN 81 (973)
Q Consensus 4 ~L~l~~~~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p-~~~~~l~~L~~-L~l~~ 81 (973)
+++-++++++ .+|..+ .+++++|+|++|+|+...+..|.++++|++|+|++|++.+.+| .+|.++++|++ ++++.
T Consensus 13 ~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~ 89 (350)
T 4ay9_X 13 VFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 89 (350)
T ss_dssp EEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEE
T ss_pred EEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccC
Confidence 3444555555 555544 2455555555555554333345555555555555555543333 23455555443 34444
Q ss_pred CcCcccCCccccCccccceeeccCCcCCCCCCCccccCCccceeeccc-ccccccCcccccccCCCCceecccCCCCCCC
Q 002069 82 NLLSGSIPNEVGSLKSLSDLRLSNNSLNGSIPSSLGNLTNLVTLYLHM-NALSGSIPDEIGNLKFLSDLQVSYNTLSGAI 160 (973)
Q Consensus 82 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~-n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 160 (973)
|+++...|+.|..+++|++|++++|++++..+..+....++..|++.+ |++....+..|..+.
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~---------------- 153 (350)
T 4ay9_X 90 NNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLS---------------- 153 (350)
T ss_dssp TTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSB----------------
T ss_pred CcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcc----------------
Confidence 555544444555555555555555555533333444444455555533 344433333344432
Q ss_pred CccccCccccceeeecccccCCCCCccccccCccceeecc-ccccccccccccCCCCcccEEecCCcccCCCCCcccccc
Q 002069 161 PFSLGNLTNLVTLYIGINALSGSIPNEIGNLKSLSDLRLD-YNTLSGSILYSFGNLTKLEILYLDVNALSGLIPNEIGNL 239 (973)
Q Consensus 161 p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~-~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l 239 (973)
..++.|++++|+|+ .+|.......+|++|+++ +|.++.++.+.|.++++|++|+|++|+|+.+++..|.++
T Consensus 154 -------~~l~~L~L~~N~i~-~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L 225 (350)
T 4ay9_X 154 -------FESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENL 225 (350)
T ss_dssp -------SSCEEEECCSSCCC-EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTC
T ss_pred -------hhhhhhcccccccc-CCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhccc
Confidence 13444444444444 233333333444455544 244444444445555555555555555554444444444
Q ss_pred cccccee
Q 002069 240 KSLLALQ 246 (973)
Q Consensus 240 ~~L~~L~ 246 (973)
++|+.++
T Consensus 226 ~~L~~l~ 232 (350)
T 4ay9_X 226 KKLRARS 232 (350)
T ss_dssp CEEECTT
T ss_pred hHhhhcc
Confidence 4444433
No 344
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.88 E-value=1.3e-22 Score=225.16 Aligned_cols=239 Identities=19% Similarity=0.129 Sum_probs=161.0
Q ss_pred CeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCcccCCccccCccccceeeccCCcCCCCCC-CccccCCccce-eecc
Q 002069 51 NGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSLSDLRLSNNSLNGSIP-SSLGNLTNLVT-LYLH 128 (973)
Q Consensus 51 ~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~-L~L~ 128 (973)
++++.++++++ .+|..+ .+++++|+|++|+++...+..|.++++|++|+|++|++.+.+| ..|.++++|++ +.++
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 45566666666 566555 2466777777777763333456677777777777777654444 35666766554 4555
Q ss_pred cccccccCcccccccCCCCceecccCCCCCCCCccccCccccceeeecc-cccCCCCCccccccC-ccceeecccccccc
Q 002069 129 MNALSGSIPDEIGNLKFLSDLQVSYNTLSGAIPFSLGNLTNLVTLYIGI-NALSGSIPNEIGNLK-SLSDLRLDYNTLSG 206 (973)
Q Consensus 129 ~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~-n~l~~~~p~~~~~l~-~L~~L~L~~N~l~~ 206 (973)
.|+++...|+.|.++++|++|++++|+++...+..+....++..|++.. +++....+..|..+. .++.|+|++|+|+.
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~ 168 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE 168 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccC
Confidence 6777766667777777777777777777766666666677777777754 566655555666664 68889999999998
Q ss_pred ccccccCCCCcccEEecC-CcccCCCCCccccccccccceecccccccCCCCcccCCcchhhhccCCCcccCchhhhhhc
Q 002069 207 SILYSFGNLTKLEILYLD-VNALSGLIPNEIGNLKSLLALQLNYNTLSGSIPCSFGNLTKLVISCLGTNALSSSILEEIG 285 (973)
Q Consensus 207 ~~~~~~~~l~~L~~L~L~-~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~n~i~~~~~~~~~ 285 (973)
++...|. ..+|+.|+++ +|.++.+.++.|.++++|++|+|++|+|+.+++..|.++++|+.+++. .+...+ .+.
T Consensus 169 i~~~~f~-~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~~--~l~~lP--~l~ 243 (350)
T 4ay9_X 169 IHNSAFN-GTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTY--NLKKLP--TLE 243 (350)
T ss_dssp ECTTSST-TEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTCT--TCCCCC--CTT
T ss_pred CChhhcc-ccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhccCC--CcCcCC--Cch
Confidence 7776664 4678888886 578888877888999999999999999988777777777766655442 222222 244
Q ss_pred cccccceEEccc
Q 002069 286 NLKSLLHLQLNY 297 (973)
Q Consensus 286 ~l~~L~~L~l~~ 297 (973)
++++|+.+++.+
T Consensus 244 ~l~~L~~l~l~~ 255 (350)
T 4ay9_X 244 KLVALMEASLTY 255 (350)
T ss_dssp TCCSCCEEECSC
T ss_pred hCcChhhCcCCC
Confidence 455555555543
No 345
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=2.1e-22 Score=218.84 Aligned_cols=191 Identities=25% Similarity=0.347 Sum_probs=157.7
Q ss_pred CcEEeCCCCCCCCCCCcccCCCCCCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccC
Q 002069 2 LKVLGLSFNQFSGSIPPEIGHLTHLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGN 81 (973)
Q Consensus 2 l~~L~l~~~~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~ 81 (973)
|+.|++++|+++ .+| .+..+++|++|+|++|++++. |. +..+++|++|++++|+++ .+| .++.+++|++|++++
T Consensus 43 L~~L~l~~~~i~-~l~-~~~~l~~L~~L~L~~n~i~~~-~~-~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~l~~ 116 (308)
T 1h6u_A 43 ITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQITDL-AP-LKNLTKITELELSGNPLK-NVS-AIAGLQSIKTLDLTS 116 (308)
T ss_dssp CCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCCSCCEEECCSCCCS-CCG-GGTTCTTCCEEECTT
T ss_pred cCEEEeeCCCcc-Cch-hhhccCCCCEEEccCCcCCCC-hh-HccCCCCCEEEccCCcCC-Cch-hhcCCCCCCEEECCC
Confidence 789999999998 676 699999999999999999964 44 999999999999999998 455 699999999999999
Q ss_pred CcCcccCCccccCccccceeeccCCcCCCCCCCccccCCccceeecccccccccCcccccccCCCCceecccCCCCCCCC
Q 002069 82 NLLSGSIPNEVGSLKSLSDLRLSNNSLNGSIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSGAIP 161 (973)
Q Consensus 82 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 161 (973)
|++++ +|. +..+++|++|++++|++++ +|. ++.+++|++|++++|++++ ++. +.++++|++|++++|++++..+
T Consensus 117 n~l~~-~~~-l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~ 190 (308)
T 1h6u_A 117 TQITD-VTP-LAGLSNLQVLYLDLNQITN-ISP-LAGLTNLQYLSIGNAQVSD-LTP-LANLSKLTTLKADDNKISDISP 190 (308)
T ss_dssp SCCCC-CGG-GTTCTTCCEEECCSSCCCC-CGG-GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG
T ss_pred CCCCC-chh-hcCCCCCCEEECCCCccCc-Ccc-ccCCCCccEEEccCCcCCC-Chh-hcCCCCCCEEECCCCccCcChh
Confidence 99984 554 8999999999999999985 444 8899999999999999984 444 8888888888888888875443
Q ss_pred ccccCccccceeeecccccCCCCCccccccCccceeecccccccccc
Q 002069 162 FSLGNLTNLVTLYIGINALSGSIPNEIGNLKSLSDLRLDYNTLSGSI 208 (973)
Q Consensus 162 ~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 208 (973)
+..+++|+.|++++|++++.. .+..+++|++|++++|++++.+
T Consensus 191 --l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~~~~ 233 (308)
T 1h6u_A 191 --LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTITNQP 233 (308)
T ss_dssp --GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEECCC
T ss_pred --hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeeecCC
Confidence 667777777777777777433 2666777777777777766533
No 346
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=5.5e-22 Score=209.07 Aligned_cols=180 Identities=26% Similarity=0.258 Sum_probs=100.4
Q ss_pred CCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCcccCCccccCccccceeecc
Q 002069 25 HLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSLSDLRLS 104 (973)
Q Consensus 25 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~ 104 (973)
..++++++++.++ .+|..+. ++|+.|+|++|++.+..|..|+++++|++|+|++|++++..|..+..+++|++|+|+
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 3455666666665 3454443 455566666666554444555555555555555555554444445555555555555
Q ss_pred CCcCCCCCCCccccCCccceeecccccccccCcccccccCCCCceecccCCCCCCCCccccCccccceeeecccccCCCC
Q 002069 105 NNSLNGSIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSGAIPFSLGNLTNLVTLYIGINALSGSI 184 (973)
Q Consensus 105 ~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~ 184 (973)
+|++++..|..|..+++|++|+|++|+++ +..+..|..+++|+.|++++|++++..
T Consensus 92 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~------------------------~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 147 (251)
T 3m19_A 92 NNQLASLPLGVFDHLTQLDKLYLGGNQLK------------------------SLPSGVFDRLTKLKELRLNTNQLQSIP 147 (251)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCC------------------------CCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CCcccccChhHhcccCCCCEEEcCCCcCC------------------------CcChhHhccCCcccEEECcCCcCCccC
Confidence 55555433444455555555555555554 343444455555555555555555444
Q ss_pred CccccccCccceeeccccccccccccccCCCCcccEEecCCcccCCC
Q 002069 185 PNEIGNLKSLSDLRLDYNTLSGSILYSFGNLTKLEILYLDVNALSGL 231 (973)
Q Consensus 185 p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~ 231 (973)
+..|..+++|++|+|++|+++++++..|..+++|+.|++++|.++..
T Consensus 148 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 148 AGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred HHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 44555666666666666666666666666666666666666666544
No 347
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.88 E-value=1.5e-24 Score=244.64 Aligned_cols=261 Identities=19% Similarity=0.170 Sum_probs=134.2
Q ss_pred CCccccCccccceeeecccccCCCCC----ccccccCccceeeccccccc---cccccc-------cCCCCcccEEecCC
Q 002069 160 IPFSLGNLTNLVTLYIGINALSGSIP----NEIGNLKSLSDLRLDYNTLS---GSILYS-------FGNLTKLEILYLDV 225 (973)
Q Consensus 160 ~p~~l~~l~~L~~L~l~~n~l~~~~p----~~~~~l~~L~~L~L~~N~l~---~~~~~~-------~~~l~~L~~L~L~~ 225 (973)
++..+..+++|+.|++++|.++...+ ..+..+++|++|+|++|.+. +..+.. |..+++|++|+|++
T Consensus 24 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~ 103 (386)
T 2ca6_A 24 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSD 103 (386)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCS
T ss_pred HHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCC
Confidence 34445555555555555555553322 22445555555555554332 111222 24445555555555
Q ss_pred cccCC----CCCccccccccccceecccccccCCCCcccCCcchhhhccCCCcccCchhhhhhccc---------cccce
Q 002069 226 NALSG----LIPNEIGNLKSLLALQLNYNTLSGSIPCSFGNLTKLVISCLGTNALSSSILEEIGNL---------KSLLH 292 (973)
Q Consensus 226 n~i~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l---------~~L~~ 292 (973)
|.++. ..+..+..+++|+.|+|++|.++...+..+ ...+..+ ++|++
T Consensus 104 n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l--------------------~~~l~~l~~~~~~~~~~~L~~ 163 (386)
T 2ca6_A 104 NAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKI--------------------ARALQELAVNKKAKNAPPLRS 163 (386)
T ss_dssp CCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHH--------------------HHHHHHHHHHHHHHTCCCCCE
T ss_pred CcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHH--------------------HHHHHHHhhhhhcccCCCCcE
Confidence 55544 123344444555555555554432111111 1112222 66777
Q ss_pred EEcccccccC-CcC---chhhcCCccceeeccccccCC-----CCCccccCCCCCCcEEcCCCCCC----CcchhccCCC
Q 002069 293 LQLNYNTLSG-SIP---LSLGSLTNLATLYFSTNALSG-----SIPNEITNLRSLSDLQLSENTLN----GSIPLALGNL 359 (973)
Q Consensus 293 L~l~~n~l~~-~~~---~~~~~l~~L~~L~L~~n~l~~-----~~~~~~~~l~~L~~L~L~~N~l~----~~~~~~~~~l 359 (973)
|++++|+++. ..+ ..+..+++|++|++++|.++. ..+..+..+++|+.|+|++|.++ ..+|..+..+
T Consensus 164 L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~ 243 (386)
T 2ca6_A 164 IICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSW 243 (386)
T ss_dssp EECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGC
T ss_pred EECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccC
Confidence 7777777652 223 345566667777777776652 23335666666777777777664 3455566666
Q ss_pred CCCcEEEccCCcccCC----CCcccc--cccccchhccccccccc----CCCccc-CCCCCCCEEEccCCCCCCCcc--h
Q 002069 360 TKLVSLDLSINKLSGS----IPLSFA--SLTSLTTLYLYENSLCD----SIPKEI-GDMKSLSILDLSSNKLNGSIP--L 426 (973)
Q Consensus 360 ~~L~~L~Ls~N~i~~~----~~~~~~--~l~~L~~L~L~~N~l~~----~~~~~~-~~l~~L~~L~Ls~N~l~~~~~--~ 426 (973)
++|++|+|++|+|++. .+..+. .+++|+.|+|++|.+++ .+|..+ .++++|++|++++|++++..+ .
T Consensus 244 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~~~~ 323 (386)
T 2ca6_A 244 PNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDDVVD 323 (386)
T ss_dssp TTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSHHHH
T ss_pred CCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchhHHH
Confidence 6677777777766643 233332 25666666666666655 244444 445666666666666665443 4
Q ss_pred hhhhhcccceEEEe
Q 002069 427 SLANLTNSLKVLYL 440 (973)
Q Consensus 427 ~~~~~~~~L~~L~L 440 (973)
.+....++++.+++
T Consensus 324 ~l~~~l~~~~~~~l 337 (386)
T 2ca6_A 324 EIREVFSTRGRGEL 337 (386)
T ss_dssp HHHHHHHHHTCCEE
T ss_pred HHHHHhhhcCcchh
Confidence 44444444443333
No 348
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.87 E-value=5.5e-24 Score=235.44 Aligned_cols=252 Identities=20% Similarity=0.294 Sum_probs=190.0
Q ss_pred CCCEEECCCCcccccCCcCccCC--CCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCccc-CCccccCcccccee
Q 002069 25 HLKLLSFSKNQLSGLIPHEIGRL--SSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGS-IPNEVGSLKSLSDL 101 (973)
Q Consensus 25 ~L~~L~l~~n~l~~~~p~~~~~l--~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~-~p~~~~~l~~L~~L 101 (973)
.++.||+++|.+. |..+..+ ++++.|++++|.+.+..|. +..+++|++|++++|.+++. +|..+..+++|++|
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L 123 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNL 123 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEE
Confidence 4788899988876 4567777 8899999999998855444 66788999999999988754 77788888899999
Q ss_pred eccCCcCCCCCCCccccCCccceeecccc-cccc-cCcccccccCCCCceecccC-CCCCC-CCccccCcc-ccceeeec
Q 002069 102 RLSNNSLNGSIPSSLGNLTNLVTLYLHMN-ALSG-SIPDEIGNLKFLSDLQVSYN-TLSGA-IPFSLGNLT-NLVTLYIG 176 (973)
Q Consensus 102 ~L~~n~l~~~~p~~~~~l~~L~~L~L~~n-~l~~-~~p~~~~~l~~L~~L~l~~N-~l~~~-~p~~l~~l~-~L~~L~l~ 176 (973)
+|++|++++..|..++.+++|++|+|++| .+++ .++..+.++++|++|++++| .+++. ++..+..++ +|++|+++
T Consensus 124 ~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~ 203 (336)
T 2ast_B 124 SLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLS 203 (336)
T ss_dssp ECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECC
T ss_pred eCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeC
Confidence 99999887777778888889999999988 6764 26677888888888888888 88743 566677888 88888888
Q ss_pred ccc--cC-CCCCccccccCccceeeccccc-cccccccccCCCCcccEEecCCcccCCCCCc---cccccccccceeccc
Q 002069 177 INA--LS-GSIPNEIGNLKSLSDLRLDYNT-LSGSILYSFGNLTKLEILYLDVNALSGLIPN---EIGNLKSLLALQLNY 249 (973)
Q Consensus 177 ~n~--l~-~~~p~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~---~~~~l~~L~~L~L~~ 249 (973)
+|. ++ +.+|..+.++++|++|++++|. +++..+..+..+++|+.|++++|. .+.+. .+.++++|+.|++++
T Consensus 204 ~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~--~~~~~~~~~l~~~~~L~~L~l~~ 281 (336)
T 2ast_B 204 GYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCY--DIIPETLLELGEIPTLKTLQVFG 281 (336)
T ss_dssp SCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCT--TCCGGGGGGGGGCTTCCEEECTT
T ss_pred CCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCC--CCCHHHHHHHhcCCCCCEEeccC
Confidence 884 43 3456677778888888888888 666666677888888888888885 22233 567777778887777
Q ss_pred ccccCCCCcccCCcchhhhccCCCcccCchhhhhhccc-cccceEEcccccccCCcCchhhc
Q 002069 250 NTLSGSIPCSFGNLTKLVISCLGTNALSSSILEEIGNL-KSLLHLQLNYNTLSGSIPLSLGS 310 (973)
Q Consensus 250 N~l~~~~~~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l-~~L~~L~l~~n~l~~~~~~~~~~ 310 (973)
| ++ .. .+..+ .+++.|++++|++++..|..++.
T Consensus 282 ~-i~---~~------------------------~~~~l~~~l~~L~l~~n~l~~~~~~~~~~ 315 (336)
T 2ast_B 282 I-VP---DG------------------------TLQLLKEALPHLQINCSHFTTIARPTIGN 315 (336)
T ss_dssp S-SC---TT------------------------CHHHHHHHSTTSEESCCCSCCTTCSSCSS
T ss_pred c-cC---HH------------------------HHHHHHhhCcceEEecccCccccCCcccc
Confidence 7 32 11 12222 24667778899998888877764
No 349
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.86 E-value=4.2e-22 Score=212.70 Aligned_cols=154 Identities=18% Similarity=0.106 Sum_probs=122.7
Q ss_pred HHHHHhcCCcccccccCCCceeEEEEEcCCCCEEEEEEcCCCCCcch---------------hhHHHHHHHHHHhhcCCC
Q 002069 695 EIIRATKNFDDEHCIGNGGQGSVYKAELPTGEIVAVKKFHSPLPGEM---------------ACQQEFLNEGNALTKIRH 759 (973)
Q Consensus 695 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~---------------~~~~~~~~e~~~l~~l~h 759 (973)
........|++.+.||+|+||.||+|...+|+.||||+++....... .....+.+|+.++++++
T Consensus 84 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~- 162 (282)
T 1zar_A 84 RLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ- 162 (282)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-
T ss_pred HHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-
Confidence 34444567778899999999999999778899999999864322110 23567899999999998
Q ss_pred CceeeeceeeeccceeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeee
Q 002069 760 RNIVKFYGFCSHALHSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLL 839 (973)
Q Consensus 760 ~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill 839 (973)
| +++.+++.. +..++||||+++++|.+ +.. .+...++.|++.|++|||+. +|+||||||+||++
T Consensus 163 -~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~---------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl 226 (282)
T 1zar_A 163 -G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV---------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLV 226 (282)
T ss_dssp -T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC---------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEE
T ss_pred -C-CCcCeEEec-cceEEEEEecCCCcHHH-cch---------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEE
Confidence 5 677776544 46699999999999988 421 23457999999999999999 99999999999999
Q ss_pred cCCCceEEecccccccccCCCCcccccccccCcccccccc
Q 002069 840 NLEYEAHVSDFGISKFLKLGLSNRTELAGTFGYIAPELAY 879 (973)
Q Consensus 840 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~ 879 (973)
+ ++.+||+|||+|+. +..|+|||++.
T Consensus 227 ~-~~~vkl~DFG~a~~-------------~~~~~a~e~l~ 252 (282)
T 1zar_A 227 S-EEGIWIIDFPQSVE-------------VGEEGWREILE 252 (282)
T ss_dssp E-TTEEEECCCTTCEE-------------TTSTTHHHHHH
T ss_pred E-CCcEEEEECCCCeE-------------CCCCCHHHHHH
Confidence 9 99999999999863 33478899874
No 350
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.86 E-value=5.2e-21 Score=195.37 Aligned_cols=181 Identities=24% Similarity=0.245 Sum_probs=137.4
Q ss_pred cEEeCCCCCCCCCCCcccCCCCCCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCC
Q 002069 3 KVLGLSFNQFSGSIPPEIGHLTHLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNN 82 (973)
Q Consensus 3 ~~L~l~~~~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n 82 (973)
+.++.++++++ .+|..+ .++|++|++++|++++..+..|..+++|++|++++|++++..+..|..+++|++|++++|
T Consensus 10 ~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 45777888887 677665 357888888888888666666788888888888888888555556778888888888888
Q ss_pred cCcccCCccccCccccceeeccCCcCCCCCCCccccCCccceeecccccccccCcccccccCCCCceecccCCCCCCCCc
Q 002069 83 LLSGSIPNEVGSLKSLSDLRLSNNSLNGSIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSGAIPF 162 (973)
Q Consensus 83 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 162 (973)
++++..+..++.+++|++|++++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|++++|.+.+
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~---- 162 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC---- 162 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC----
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec----
Confidence 8885555557788888888888888886555567888888888888888886555567888888888888887653
Q ss_pred cccCccccceeeecccccCCCCCccccccCc
Q 002069 163 SLGNLTNLVTLYIGINALSGSIPNEIGNLKS 193 (973)
Q Consensus 163 ~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~ 193 (973)
.+++|+.|+++.|++++.+|..++.++.
T Consensus 163 ---~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 163 ---TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp ---CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred ---CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 3557777888888888777877776554
No 351
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.84 E-value=1.1e-20 Score=219.95 Aligned_cols=189 Identities=26% Similarity=0.305 Sum_probs=142.2
Q ss_pred CCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCcccCCccccCccccceeecc
Q 002069 25 HLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSLSDLRLS 104 (973)
Q Consensus 25 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~ 104 (973)
+|++|+|++|++++ +|..+. ++|++|+|++|+++ .+| ..+++|++|+|++|++++ +|. +.. +|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 78888888888875 666653 77888888888887 677 456788888888888874 776 655 78888888
Q ss_pred CCcCCCCCCCccccCCccceeecccccccccCcccccccCCCCceecccCCCCCCCCccccCccccceeeecccccCCCC
Q 002069 105 NNSLNGSIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSGAIPFSLGNLTNLVTLYIGINALSGSI 184 (973)
Q Consensus 105 ~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~ 184 (973)
+|++++ +|. .+++|++|+|++|+|++ +|. .+++|++|+|++|++++ +|. |. ++|+.|+|++|+|+ .+
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~l 195 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SL 195 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SC
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-ch
Confidence 888874 666 57788888888888874 565 56788888888888875 555 55 78888888888888 56
Q ss_pred CccccccCcc-------ceeeccccccccccccccCCCCcccEEecCCcccCCCCCcccccccc
Q 002069 185 PNEIGNLKSL-------SDLRLDYNTLSGSILYSFGNLTKLEILYLDVNALSGLIPNEIGNLKS 241 (973)
Q Consensus 185 p~~~~~l~~L-------~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~ 241 (973)
|. +.. +| +.|+|++|+|+.++. .+..+++|+.|+|++|.+++..|..+..+..
T Consensus 196 p~-~~~--~L~~~~~~L~~L~Ls~N~l~~lp~-~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 196 PA-VPV--RNHHSEETEIFFRCRENRITHIPE-NILSLDPTCTIILEDNPLSSRIRESLSQQTA 255 (571)
T ss_dssp CC-CC----------CCEEEECCSSCCCCCCG-GGGGSCTTEEEECCSSSCCHHHHHHHHHHHH
T ss_pred hh-HHH--hhhcccccceEEecCCCcceecCH-HHhcCCCCCEEEeeCCcCCCcCHHHHHHhhc
Confidence 66 554 66 889999999986544 4555899999999999998877777776654
No 352
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.84 E-value=3.1e-20 Score=189.63 Aligned_cols=180 Identities=25% Similarity=0.225 Sum_probs=115.0
Q ss_pred CEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCcccCCccccCccccceeeccCC
Q 002069 27 KLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSLSDLRLSNN 106 (973)
Q Consensus 27 ~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n 106 (973)
+.++.+++.++ .+|..+ .++|++|++++|++++..+..|+.+++|++|++++|++++..+..|..+++|++|+|++|
T Consensus 10 ~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 56777777776 455444 357777777777777555555677777777777777777444445667777777777777
Q ss_pred cCCCCCCCccccCCccceeecccccccccCcccccccCCCCceecccCCCCCCCCccccCccccceeeecccccCCCCCc
Q 002069 107 SLNGSIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSGAIPFSLGNLTNLVTLYIGINALSGSIPN 186 (973)
Q Consensus 107 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~ 186 (973)
++++..+..|.++++|++|++++|++++..+..|.++++|++|++++|++++..+..+..+++|+.|++++|.+.+
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~---- 162 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC---- 162 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC----
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec----
Confidence 7775444556677777777777777765555556666777777777776665555556666666666666665542
Q ss_pred cccccCccceeeccccccccccccccCCCC
Q 002069 187 EIGNLKSLSDLRLDYNTLSGSILYSFGNLT 216 (973)
Q Consensus 187 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 216 (973)
.+++|+.|+++.|++++..+..++.++
T Consensus 163 ---~~~~l~~L~~~~n~~~g~ip~~~~~l~ 189 (208)
T 2o6s_A 163 ---TCPGIRYLSEWINKHSGVVRNSAGSVA 189 (208)
T ss_dssp ---CTTTTHHHHHHHHHCTTTBBCTTSSBC
T ss_pred ---CCCCHHHHHHHHHhCCceeeccCcccc
Confidence 234555555666666555555444443
No 353
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.83 E-value=3.1e-20 Score=216.25 Aligned_cols=189 Identities=25% Similarity=0.299 Sum_probs=163.2
Q ss_pred CCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCcccCCccccCccccceeeccCCcCCCCCCCccccCCccceeecc
Q 002069 49 SLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSLSDLRLSNNSLNGSIPSSLGNLTNLVTLYLH 128 (973)
Q Consensus 49 ~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 128 (973)
+|+.|+|++|++++ +|..+. ++|++|+|++|+++ .+| ..+++|++|+|++|++++ +|. +.+ +|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 99999999999995 888774 89999999999999 788 457899999999999995 887 765 99999999
Q ss_pred cccccccCcccccccCCCCceecccCCCCCCCCccccCccccceeeecccccCCCCCccccccCccceeecccccccccc
Q 002069 129 MNALSGSIPDEIGNLKFLSDLQVSYNTLSGAIPFSLGNLTNLVTLYIGINALSGSIPNEIGNLKSLSDLRLDYNTLSGSI 208 (973)
Q Consensus 129 ~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 208 (973)
+|+|++ +|. .+++|+.|++++|.+++ +|. .+++|+.|++++|++++ +|. |. ++|+.|+|++|+|+.++
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~~lp 196 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLESLP 196 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCSSCC
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCCchh
Confidence 999995 676 68999999999999996 555 67899999999999995 777 66 99999999999999766
Q ss_pred ccccCCCCcc-------cEEecCCcccCCCCCccccccccccceecccccccCCCCcccCCcch
Q 002069 209 LYSFGNLTKL-------EILYLDVNALSGLIPNEIGNLKSLLALQLNYNTLSGSIPCSFGNLTK 265 (973)
Q Consensus 209 ~~~~~~l~~L-------~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 265 (973)
. |.. +| +.|+|++|+|+.+ |..+..+++|+.|+|++|++++..|..|..++.
T Consensus 197 ~--~~~--~L~~~~~~L~~L~Ls~N~l~~l-p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 197 A--VPV--RNHHSEETEIFFRCRENRITHI-PENILSLDPTCTIILEDNPLSSRIRESLSQQTA 255 (571)
T ss_dssp C--CC----------CCEEEECCSSCCCCC-CGGGGGSCTTEEEECCSSSCCHHHHHHHHHHHH
T ss_pred h--HHH--hhhcccccceEEecCCCcceec-CHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhhc
Confidence 5 554 77 9999999999976 677777999999999999999888887776554
No 354
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.82 E-value=3.1e-20 Score=199.88 Aligned_cols=172 Identities=27% Similarity=0.354 Sum_probs=75.8
Q ss_pred cCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCcccCCccccCccccceeeccCCcCCCCCCCccccCCccce
Q 002069 45 GRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSLSDLRLSNNSLNGSIPSSLGNLTNLVT 124 (973)
Q Consensus 45 ~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 124 (973)
..+++|++|++++|.+. .+|. ++.+++|++|++++|++++ ++. +..+++|++|++++|++++ +| .+..+++|++
T Consensus 43 ~~l~~L~~L~l~~~~i~-~~~~-~~~l~~L~~L~L~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~ 116 (291)
T 1h6t_A 43 NELNSIDQIIANNSDIK-SVQG-IQYLPNVTKLFLNGNKLTD-IKP-LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKS 116 (291)
T ss_dssp HHHHTCCEEECTTSCCC-CCTT-GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCE
T ss_pred hhcCcccEEEccCCCcc-cChh-HhcCCCCCEEEccCCccCC-Ccc-cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCE
Confidence 34444444444444444 2222 4444444444444444442 222 4444444444444444442 22 2444444444
Q ss_pred eecccccccccCcccccccCCCCceecccCCCCCCCCccccCccccceeeecccccCCCCCccccccCccceeecccccc
Q 002069 125 LYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSGAIPFSLGNLTNLVTLYIGINALSGSIPNEIGNLKSLSDLRLDYNTL 204 (973)
Q Consensus 125 L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l 204 (973)
|++++|++++ + +.+..+++|++|++++|++++. ..+..+++|+.|++++|++++..| +..+++|++|++++|++
T Consensus 117 L~L~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i 190 (291)
T 1h6t_A 117 LSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHI 190 (291)
T ss_dssp EECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC
T ss_pred EECCCCcCCC-C-hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcC
Confidence 4444444442 1 2344444444444444444422 234444444444444444443222 44444444455544444
Q ss_pred ccccccccCCCCcccEEecCCcccCC
Q 002069 205 SGSILYSFGNLTKLEILYLDVNALSG 230 (973)
Q Consensus 205 ~~~~~~~~~~l~~L~~L~L~~n~i~~ 230 (973)
++++ .+..+++|+.|++++|.++.
T Consensus 191 ~~l~--~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 191 SDLR--ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CBCG--GGTTCTTCSEEEEEEEEEEC
T ss_pred CCCh--hhccCCCCCEEECcCCcccC
Confidence 4332 24444555555555554443
No 355
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.82 E-value=1.9e-20 Score=201.63 Aligned_cols=192 Identities=25% Similarity=0.357 Sum_probs=163.5
Q ss_pred EeCCCCCCCCCCCcccCCCCCCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcC
Q 002069 5 LGLSFNQFSGSIPPEIGHLTHLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLL 84 (973)
Q Consensus 5 L~l~~~~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l 84 (973)
+.+..+.+++. ..+..+++|++|++++|.+++. | .+..+++|++|++++|++++ +|. ++.+++|++|++++|++
T Consensus 29 ~~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~-~~~-l~~l~~L~~L~l~~n~l 102 (291)
T 1h6t_A 29 DNLKKKSVTDA--VTQNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTD-IKP-LANLKNLGWLFLDENKV 102 (291)
T ss_dssp HHTTCSCTTSE--ECHHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCC
T ss_pred HHhcCCCcccc--cchhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCC-Ccc-cccCCCCCEEECCCCcC
Confidence 35566666532 2346789999999999999854 4 59999999999999999994 555 99999999999999999
Q ss_pred cccCCccccCccccceeeccCCcCCCCCCCccccCCccceeecccccccccCcccccccCCCCceecccCCCCCCCCccc
Q 002069 85 SGSIPNEVGSLKSLSDLRLSNNSLNGSIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSGAIPFSL 164 (973)
Q Consensus 85 ~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l 164 (973)
+ .+| .++.+++|++|++++|++++ + ..+..+++|++|++++|++++. ..++.+++|++|++++|++++..| +
T Consensus 103 ~-~~~-~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l 174 (291)
T 1h6t_A 103 K-DLS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--L 174 (291)
T ss_dssp C-CGG-GGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--G
T ss_pred C-CCh-hhccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--h
Confidence 8 454 48999999999999999985 4 5799999999999999999854 689999999999999999996655 8
Q ss_pred cCccccceeeecccccCCCCCccccccCccceeecccccccccccccc
Q 002069 165 GNLTNLVTLYIGINALSGSIPNEIGNLKSLSDLRLDYNTLSGSILYSF 212 (973)
Q Consensus 165 ~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~ 212 (973)
..+++|+.|++++|.+++ +| .+..+++|+.|++++|++...+...+
T Consensus 175 ~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~~~~~~~~ 220 (291)
T 1h6t_A 175 AGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLNKPINHQ 220 (291)
T ss_dssp TTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEECCCEECC
T ss_pred cCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCcccCCccccc
Confidence 999999999999999995 55 48999999999999999987554443
No 356
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.81 E-value=2.5e-20 Score=219.71 Aligned_cols=193 Identities=24% Similarity=0.315 Sum_probs=123.5
Q ss_pred CCCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCcccCCccccCccccceeec
Q 002069 24 THLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSLSDLRL 103 (973)
Q Consensus 24 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L 103 (973)
..+..+.++.+.+.+..+ +..|++|+.|++++|.+. .+| .++.+++|++|+|++|++++ +|. +..+++|++|+|
T Consensus 21 ~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N~l~~-~~~-l~~l~~L~~L~L 94 (605)
T 1m9s_A 21 AETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTD-IKP-LTNLKNLGWLFL 94 (605)
T ss_dssp HHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCC-CCT-TGGGCTTCCEEECTTSCCCC-CGG-GGGCTTCCEEEC
T ss_pred HHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCC-CCh-HHccCCCCCEEEeeCCCCCC-Chh-hccCCCCCEEEC
Confidence 334555666666664432 566777777777777776 444 47777777777777777764 333 667777777777
Q ss_pred cCCcCCCCCCCccccCCccceeecccccccccCcccccccCCCCceecccCCCCCCCCccccCccccceeeecccccCCC
Q 002069 104 SNNSLNGSIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSGAIPFSLGNLTNLVTLYIGINALSGS 183 (973)
Q Consensus 104 ~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~ 183 (973)
++|++++ +| .+..+++|++|+|++|++++ + ..+..+++|+.|+|++|++++. ..+..+++|+.|+|++|++.+.
T Consensus 95 s~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~ 168 (605)
T 1m9s_A 95 DENKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDI 168 (605)
T ss_dssp CSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCC
T ss_pred cCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCc
Confidence 7777763 33 56777777777777777763 2 3466677777777777776643 4566666666666666666644
Q ss_pred CCccccccCccceeeccccccccccccccCCCCcccEEecCCcccCCCC
Q 002069 184 IPNEIGNLKSLSDLRLDYNTLSGSILYSFGNLTKLEILYLDVNALSGLI 232 (973)
Q Consensus 184 ~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~ 232 (973)
.| +..+++|+.|+|++|+|+++ ..+..+++|+.|+|++|.+.+.+
T Consensus 169 ~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p 213 (605)
T 1m9s_A 169 VP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKP 213 (605)
T ss_dssp GG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECCC
T ss_pred hh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCCc
Confidence 33 66666666666666666654 24666666666666666665543
No 357
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.81 E-value=6.4e-20 Score=216.26 Aligned_cols=202 Identities=25% Similarity=0.347 Sum_probs=172.0
Q ss_pred EEeCCCCCCCCCCCcccCCCCCCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCc
Q 002069 4 VLGLSFNQFSGSIPPEIGHLTHLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNL 83 (973)
Q Consensus 4 ~L~l~~~~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~ 83 (973)
.++++.+.++. ++ .+..|.+|++|++++|.+.. +| .+..+++|+.|+|++|++.+ +|. +..+++|++|+|++|+
T Consensus 25 ~l~l~~~~i~~-~~-~~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~-~~~-l~~l~~L~~L~Ls~N~ 98 (605)
T 1m9s_A 25 KDNLKKKSVTD-AV-TQNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTD-IKP-LTNLKNLGWLFLDENK 98 (605)
T ss_dssp HHHTTCSCTTS-EE-CHHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCC-CGG-GGGCTTCCEEECCSSC
T ss_pred HHhccCCCccc-cc-chhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCC-Chh-hccCCCCCEEECcCCC
Confidence 35677777763 32 35788999999999999985 45 69999999999999999995 444 9999999999999999
Q ss_pred CcccCCccccCccccceeeccCCcCCCCCCCccccCCccceeecccccccccCcccccccCCCCceecccCCCCCCCCcc
Q 002069 84 LSGSIPNEVGSLKSLSDLRLSNNSLNGSIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSGAIPFS 163 (973)
Q Consensus 84 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~ 163 (973)
++ .+| .+..+++|++|+|++|++++ + ..+..+++|+.|+|++|++++. ..|+.+++|+.|+|++|++++..|
T Consensus 99 l~-~l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~-- 170 (605)
T 1m9s_A 99 IK-DLS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-- 170 (605)
T ss_dssp CC-CCT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--
T ss_pred CC-CCh-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--
Confidence 98 455 79999999999999999984 4 4699999999999999999854 689999999999999999997766
Q ss_pred ccCccccceeeecccccCCCCCccccccCccceeeccccccccccccccCCCCcccEE
Q 002069 164 LGNLTNLVTLYIGINALSGSIPNEIGNLKSLSDLRLDYNTLSGSILYSFGNLTKLEIL 221 (973)
Q Consensus 164 l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 221 (973)
+..+++|+.|+|++|.|++ + ..+..+++|+.|+|++|.+.+.+...+..+..+..+
T Consensus 171 l~~l~~L~~L~Ls~N~i~~-l-~~l~~l~~L~~L~L~~N~l~~~p~~~~~~l~~~~~l 226 (605)
T 1m9s_A 171 LAGLTKLQNLYLSKNHISD-L-RALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTV 226 (605)
T ss_dssp GTTCTTCCEEECCSSCCCB-C-GGGTTCTTCSEEECCSEEEECCCCCCCSSCEEECCC
T ss_pred hccCCCCCEEECcCCCCCC-C-hHHccCCCCCEEEccCCcCcCCcccccccEEecccc
Confidence 9999999999999999995 4 469999999999999999998766655555444433
No 358
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.81 E-value=1.6e-19 Score=185.52 Aligned_cols=151 Identities=21% Similarity=0.221 Sum_probs=79.1
Q ss_pred EEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCC-CcccCCCCCcEEEccCCcCcccCCccccCccccceeeccCC
Q 002069 28 LLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIP-PSLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSLSDLRLSNN 106 (973)
Q Consensus 28 ~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p-~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n 106 (973)
++++++|.++ .+|..+. ..+++|+|++|++++..| ..|+.+++|++|+|++|++++..|..|+.+++|++|+|++|
T Consensus 15 ~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 4555555554 2344332 233455555555553322 23455555555555555555444445555555555555555
Q ss_pred cCCCCCCCccccCCccceeecccccccccCcccccccCCCCceecccCCCCCCCCccccCccccceeeecccccC
Q 002069 107 SLNGSIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSGAIPFSLGNLTNLVTLYIGINALS 181 (973)
Q Consensus 107 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~ 181 (973)
++++..|..|.++++|++|+|++|+|++..|..|.++++|++|+|++|++++..|..|..+++|+.|++++|.+.
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 166 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFN 166 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEE
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCc
Confidence 555444444555555555555555555444555555555555555555555555555555666666666666555
No 359
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.81 E-value=2.1e-19 Score=184.72 Aligned_cols=152 Identities=23% Similarity=0.275 Sum_probs=92.3
Q ss_pred CEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCcccCCccccCccccceeeccCC
Q 002069 27 KLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSLSDLRLSNN 106 (973)
Q Consensus 27 ~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n 106 (973)
+.+++++|+++ .+|..+. ++|++|++++|++++..|..|..+++|++|+|++|++++..|..|..+++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 45555555555 3454443 45666666666665444445666666666666666666555666666666666666666
Q ss_pred cCCCCCCCccccCCccceeecccccccccCcccccccCCCCceecccCCCCCCCCccccCccccceeeecccccC
Q 002069 107 SLNGSIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSGAIPFSLGNLTNLVTLYIGINALS 181 (973)
Q Consensus 107 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~ 181 (973)
+++...+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|++++..+..|..+++|+.|++++|.+.
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 666433344566666666666666666555666666666666666666666555556666666777777766665
No 360
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.81 E-value=9.4e-20 Score=202.89 Aligned_cols=176 Identities=24% Similarity=0.191 Sum_probs=101.7
Q ss_pred CEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCccc-CCCCCcEEEccCCcCcccCCccccCccccceeeccC
Q 002069 27 KLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLG-NLTSLIYIDIGNNLLSGSIPNEVGSLKSLSDLRLSN 105 (973)
Q Consensus 27 ~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~-~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~ 105 (973)
+.+++++|+++ .+|..+. ..++.|+|++|++++..+..+. ++++|++|+|++|++++..|..|..+++|++|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 45566666555 3454443 2355666666666544444444 566666666666666544445566666666666666
Q ss_pred CcCCCCCCCccccCCccceeecccccccccCcccccccCCCCceecccCCCCCCCCccc---cCccccceeeecccccCC
Q 002069 106 NSLNGSIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSGAIPFSL---GNLTNLVTLYIGINALSG 182 (973)
Q Consensus 106 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l---~~l~~L~~L~l~~n~l~~ 182 (973)
|++++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|++++..+..| ..+++|+.|+|++|+|+.
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 66654444455666666666666666665555566666666666666666664333333 456666666666666664
Q ss_pred CCCccccccCc--cceeeccccccc
Q 002069 183 SIPNEIGNLKS--LSDLRLDYNTLS 205 (973)
Q Consensus 183 ~~p~~~~~l~~--L~~L~L~~N~l~ 205 (973)
..+..+..++. |+.|+|++|.+.
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred cCHHHhhhccHhhcceEEecCCCcc
Confidence 44455666665 366777777765
No 361
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.80 E-value=9.8e-20 Score=202.76 Aligned_cols=175 Identities=26% Similarity=0.238 Sum_probs=96.2
Q ss_pred EEEccCCcCcccCCccccCccccceeeccCCcCCCCCCCccc-cCCccceeecccccccccCcccccccCCCCceecccC
Q 002069 76 YIDIGNNLLSGSIPNEVGSLKSLSDLRLSNNSLNGSIPSSLG-NLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYN 154 (973)
Q Consensus 76 ~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N 154 (973)
.+++++|.++ .+|..+.. .+++|+|++|+|++..+..+. ++++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 22 ~l~c~~~~l~-~iP~~~~~--~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 98 (361)
T 2xot_A 22 ILSCSKQQLP-NVPQSLPS--YTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSN 98 (361)
T ss_dssp EEECCSSCCS-SCCSSCCT--TCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcC-ccCccCCC--CCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCC
Confidence 4444444444 34443322 344455555554433333343 4455555555555554444444555555555555555
Q ss_pred CCCCCCCccccCccccceeeecccccCCCCCccccccCccceeecccccccccccccc---CCCCcccEEecCCcccCCC
Q 002069 155 TLSGAIPFSLGNLTNLVTLYIGINALSGSIPNEIGNLKSLSDLRLDYNTLSGSILYSF---GNLTKLEILYLDVNALSGL 231 (973)
Q Consensus 155 ~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~---~~l~~L~~L~L~~n~i~~~ 231 (973)
+++...+..|.++++|+.|+|++|+|+...|..|.++++|++|+|++|+++.++...| ..+++|+.|+|++|+|+.+
T Consensus 99 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l 178 (361)
T 2xot_A 99 HLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKL 178 (361)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCC
T ss_pred cCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCcc
Confidence 5554444445555555555555555554455556666666666666666666555555 4567777777777777766
Q ss_pred CCcccccccc--ccceeccccccc
Q 002069 232 IPNEIGNLKS--LLALQLNYNTLS 253 (973)
Q Consensus 232 ~~~~~~~l~~--L~~L~L~~N~l~ 253 (973)
.+..|..++. ++.|+|++|.+.
T Consensus 179 ~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 179 PLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp CHHHHHHSCHHHHTTEECCSSCEE
T ss_pred CHHHhhhccHhhcceEEecCCCcc
Confidence 6666666665 367777777775
No 362
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.79 E-value=8.1e-19 Score=181.63 Aligned_cols=152 Identities=22% Similarity=0.266 Sum_probs=87.4
Q ss_pred CEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCcccCCccccCccccceeeccCC
Q 002069 27 KLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSLSDLRLSNN 106 (973)
Q Consensus 27 ~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n 106 (973)
+.++.++++++ .+|..+. ++|++|+|++|++++..|..|..+++|++|+|++|+++...+..|..+++|++|+|++|
T Consensus 22 ~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N 98 (229)
T 3e6j_A 22 TTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTN 98 (229)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCC
Confidence 44555555554 3444433 55556666666655555555556666666666666665333334455666666666666
Q ss_pred cCCCCCCCccccCCccceeecccccccccCcccccccCCCCceecccCCCCCCCCccccCccccceeeecccccCC
Q 002069 107 SLNGSIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSGAIPFSLGNLTNLVTLYIGINALSG 182 (973)
Q Consensus 107 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~ 182 (973)
++++..+..|..+++|++|+|++|+|+ .+|..+.++++|++|+|++|++++..+..|..+++|+.|++++|.+..
T Consensus 99 ~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 99 QLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCT
T ss_pred cCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccC
Confidence 665444444555666666666666665 455556666666666666666665555556666666666666666653
No 363
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.79 E-value=5.3e-19 Score=181.69 Aligned_cols=151 Identities=19% Similarity=0.221 Sum_probs=83.4
Q ss_pred EEeCCCCCCCCCCCcccCCCCCCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCc
Q 002069 4 VLGLSFNQFSGSIPPEIGHLTHLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNL 83 (973)
Q Consensus 4 ~L~l~~~~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~ 83 (973)
.+++++++++ .+|..+. ++|++|+|++|++++..|..|..+++|++|+|++|++++..|..|.++++|++|+|++|+
T Consensus 15 ~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~ 91 (220)
T 2v9t_B 15 IVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91 (220)
T ss_dssp EEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSC
T ss_pred EEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCc
Confidence 4555555555 5555443 455555555555555444455555555555555555554445555555555555555555
Q ss_pred CcccCCccccCccccceeeccCCcCCCCCCCccccCCccceeecccccccccCcccccccCCCCceecccCCCC
Q 002069 84 LSGSIPNEVGSLKSLSDLRLSNNSLNGSIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLS 157 (973)
Q Consensus 84 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~ 157 (973)
++...+..|..+++|++|+|++|++++..|..|.++++|++|+|++|+|++..++.|..+++|++|++++|.+.
T Consensus 92 l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 92 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 55322233455555555555555555544555555555555555555555444445555555555555555553
No 364
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.79 E-value=1.3e-19 Score=191.80 Aligned_cols=172 Identities=21% Similarity=0.269 Sum_probs=104.3
Q ss_pred CCCCCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCcccCCccccCcccccee
Q 002069 22 HLTHLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSLSDL 101 (973)
Q Consensus 22 ~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L 101 (973)
.+.+++.+++++|.+++. + .+..+++|++|++++|+++ .+| .++.+++|++|+|++|++++ +|. ++.+++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~~~-~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~-~~~-l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDL-V-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISD-LSP-LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSE-E-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCcccc-c-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCC-Chh-hccCCCCCEE
Confidence 345556666666666643 3 4666666666666666666 455 46666666777776666663 333 6666666677
Q ss_pred eccCCcCCCCCCCccccCCccceeecccccccccCcccccccCCCCceecccCCCCCCCCccccCccccceeeecccccC
Q 002069 102 RLSNNSLNGSIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSGAIPFSLGNLTNLVTLYIGINALS 181 (973)
Q Consensus 102 ~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~ 181 (973)
+|++|++++ +|... . ++|++|+|++|++++ + +.++++++|++|++++|++++. + .+..+++|+.|++++|+++
T Consensus 91 ~L~~N~l~~-l~~~~-~-~~L~~L~L~~N~l~~-~-~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 91 SVNRNRLKN-LNGIP-S-ACLSRLFLDNNELRD-T-DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp ECCSSCCSC-CTTCC-C-SSCCEEECCSSCCSB-S-GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCC
T ss_pred ECCCCccCC-cCccc-c-CcccEEEccCCccCC-C-hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCc
Confidence 777666663 44322 2 666666666666663 2 2466666666666666666633 2 4566666666666666666
Q ss_pred CCCCccccccCccceeecccccccccc
Q 002069 182 GSIPNEIGNLKSLSDLRLDYNTLSGSI 208 (973)
Q Consensus 182 ~~~p~~~~~l~~L~~L~L~~N~l~~~~ 208 (973)
+. ..+..+++|+.|++++|.+...+
T Consensus 164 ~~--~~l~~l~~L~~L~l~~N~~~~~~ 188 (263)
T 1xeu_A 164 NT--GGLTRLKKVNWIDLTGQKCVNEP 188 (263)
T ss_dssp BC--TTSTTCCCCCEEEEEEEEEECCC
T ss_pred ch--HHhccCCCCCEEeCCCCcccCCc
Confidence 43 45566666666666666665543
No 365
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.78 E-value=9.5e-20 Score=200.23 Aligned_cols=221 Identities=13% Similarity=0.102 Sum_probs=137.2
Q ss_pred cCccceeeccccccccccccccCCCCcccEEecCCcccCCCCCccccccccccceeccccc----ccCCCCcccCCcchh
Q 002069 191 LKSLSDLRLDYNTLSGSILYSFGNLTKLEILYLDVNALSGLIPNEIGNLKSLLALQLNYNT----LSGSIPCSFGNLTKL 266 (973)
Q Consensus 191 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~----l~~~~~~~~~~l~~L 266 (973)
+++|+.|+|.+ .++.+...+|.+|++|+.+++++|.+..+.+.+|.++.++..+.+..+. ...+...+|.++..|
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L 178 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPL 178 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCC
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccccc
Confidence 55555555555 4555555555555555555555555555555555555444444443321 122223334333333
Q ss_pred h-hccCCCcc-cCchhhhhhccccccceEEcccccccCCcCchh-hcCCccceeeccccccCCCCCccccCCCCCCcEEc
Q 002069 267 V-ISCLGTNA-LSSSILEEIGNLKSLLHLQLNYNTLSGSIPLSL-GSLTNLATLYFSTNALSGSIPNEITNLRSLSDLQL 343 (973)
Q Consensus 267 ~-~l~l~~n~-i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~-~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 343 (973)
+ .+.+.... +.......--...++..+.+.++-.. .....+ ..+++|+.+++++|+++.+.+.+|.++++|+.|+|
T Consensus 179 ~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l 257 (329)
T 3sb4_A 179 ETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKL 257 (329)
T ss_dssp EEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEEC
T ss_pred ceeEEecCCCcHHHHHhhcccCccccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEEC
Confidence 3 12211110 11111111123566677777655322 222222 23788999999988888777888888999999999
Q ss_pred CCCCCCCcchhccCCCCCCc-EEEccCCcccCCCCcccccccccchhcccccccccCCCcccCCCCCCCEEEc
Q 002069 344 SENTLNGSIPLALGNLTKLV-SLDLSINKLSGSIPLSFASLTSLTTLYLYENSLCDSIPKEIGDMKSLSILDL 415 (973)
Q Consensus 344 ~~N~l~~~~~~~~~~l~~L~-~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 415 (973)
.+| ++.+.+.+|.++++|+ .+++.+ .++.+.+.+|.+|++|+.++++.|+++...+.+|.++++|+.++.
T Consensus 258 ~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 258 PHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp CTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred Ccc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 887 7767778888999998 999988 777778888999999999998888888888888888888888763
No 366
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.78 E-value=6.3e-19 Score=181.15 Aligned_cols=131 Identities=20% Similarity=0.200 Sum_probs=56.0
Q ss_pred ceeeccCCcCCCCCC-CccccCCccceeecccccccccCcccccccCCCCceecccCCCCCCCCccccCccccceeeecc
Q 002069 99 SDLRLSNNSLNGSIP-SSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSGAIPFSLGNLTNLVTLYIGI 177 (973)
Q Consensus 99 ~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~ 177 (973)
++|+|++|++++..| ..|.++++|++|+|++|+|++..+..|+++++|++|+|++|++++..|..|.++++|++|++++
T Consensus 35 ~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 114 (220)
T 2v70_A 35 AELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRS 114 (220)
T ss_dssp SEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTT
T ss_pred CEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCC
Confidence 444444444442212 2234444444444444444433333444444444444444444433333344444444444444
Q ss_pred cccCCCCCccccccCccceeeccccccccccccccCCCCcccEEecCCcccC
Q 002069 178 NALSGSIPNEIGNLKSLSDLRLDYNTLSGSILYSFGNLTKLEILYLDVNALS 229 (973)
Q Consensus 178 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~ 229 (973)
|++++..|..|..+++|++|+|++|+++++.+..|..+++|+.|+|++|.+.
T Consensus 115 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 166 (220)
T 2v70_A 115 NRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFN 166 (220)
T ss_dssp SCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEE
T ss_pred CcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCc
Confidence 4444333444444444444444444444444444444444444444444443
No 367
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.78 E-value=2.3e-21 Score=227.29 Aligned_cols=190 Identities=18% Similarity=0.156 Sum_probs=137.7
Q ss_pred cCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCc-------------CcccCCccccCccccceee-ccCCcCCC
Q 002069 45 GRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNL-------------LSGSIPNEVGSLKSLSDLR-LSNNSLNG 110 (973)
Q Consensus 45 ~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~-------------l~~~~p~~~~~l~~L~~L~-L~~n~l~~ 110 (973)
..++.|+.|+|++|+++ .+|+++++|++|+.|++++|. ..+..|+.++.+++|+.|+ ++.|.+
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~-- 422 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL-- 422 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHH--
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhccc--
Confidence 34555555555555555 555555555555555555443 3344555555556666665 444432
Q ss_pred CCCCccccCCccceeecccccccccCcccccccCCCCceecccCCCCCCCCccccCccccceeeecccccCCCCCccccc
Q 002069 111 SIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSGAIPFSLGNLTNLVTLYIGINALSGSIPNEIGN 190 (973)
Q Consensus 111 ~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~ 190 (973)
++|+.+.+++|.++. +|. ..|+.|+|++|.+++ +|. |+.+++|+.|+|++|+|+ .+|..+++
T Consensus 423 ---------~~L~~l~l~~n~i~~-l~~-----~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 484 (567)
T 1dce_A 423 ---------DDLRSKFLLENSVLK-MEY-----ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAA 484 (567)
T ss_dssp ---------HHHHHHHHHHHHHHH-HHH-----TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGG
T ss_pred ---------chhhhhhhhcccccc-cCc-----cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhc
Confidence 234455566666653 222 248889999999985 565 899999999999999999 78889999
Q ss_pred cCccceeeccccccccccccccCCCCcccEEecCCcccCCCC-CccccccccccceecccccccCCCC
Q 002069 191 LKSLSDLRLDYNTLSGSILYSFGNLTKLEILYLDVNALSGLI-PNEIGNLKSLLALQLNYNTLSGSIP 257 (973)
Q Consensus 191 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~-~~~~~~l~~L~~L~L~~N~l~~~~~ 257 (973)
+++|+.|+|++|++++++ .|+++++|+.|+|++|+|+++. |..|+++++|+.|+|++|.+++.+|
T Consensus 485 l~~L~~L~Ls~N~l~~lp--~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 485 LRCLEVLQASDNALENVD--GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp CTTCCEEECCSSCCCCCG--GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred CCCCCEEECCCCCCCCCc--ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 999999999999999754 7899999999999999999887 8899999999999999999986655
No 368
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.78 E-value=2.4e-18 Score=178.09 Aligned_cols=152 Identities=26% Similarity=0.289 Sum_probs=102.4
Q ss_pred cEEeCCCCCCCCCCCcccCCCCCCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCC
Q 002069 3 KVLGLSFNQFSGSIPPEIGHLTHLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNN 82 (973)
Q Consensus 3 ~~L~l~~~~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n 82 (973)
+.++.++++++ .+|..+. ++|++|+|++|++++..|..|..+++|++|+|++|++....+..|..+++|++|+|++|
T Consensus 22 ~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N 98 (229)
T 3e6j_A 22 TTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTN 98 (229)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCC
Confidence 35666777765 6666554 66777777777777666666777777777777777776433445667777777777777
Q ss_pred cCcccCCccccCccccceeeccCCcCCCCCCCccccCCccceeecccccccccCcccccccCCCCceecccCCCCC
Q 002069 83 LLSGSIPNEVGSLKSLSDLRLSNNSLNGSIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSG 158 (973)
Q Consensus 83 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 158 (973)
++++..+..|..+++|++|+|++|+++ .+|..+..+++|++|+|++|+|++..+..|..+++|+.|++++|.+..
T Consensus 99 ~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 99 QLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCT
T ss_pred cCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccC
Confidence 776444445666777777777777776 566667777777777777777765555566777777777777777653
No 369
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.77 E-value=1.8e-19 Score=190.66 Aligned_cols=171 Identities=25% Similarity=0.261 Sum_probs=133.4
Q ss_pred CCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCcccCCccccCccccceeeccCCcCCCCCCCccccCCcccee
Q 002069 46 RLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSLSDLRLSNNSLNGSIPSSLGNLTNLVTL 125 (973)
Q Consensus 46 ~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 125 (973)
.+.++..+++++|.++ .++ .+..+++|++|++++|.++ .+| .+..+++|++|+|++|++++ +|. +.++++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~-~~~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~-~~~-l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVT-DLV-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISD-LSP-LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTT-SEE-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCcc-ccc-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCC-Chh-hccCCCCCEE
Confidence 5677888889999888 555 5888899999999999888 566 78888899999999999884 444 8888899999
Q ss_pred ecccccccccCcccccccCCCCceecccCCCCCCCCccccCccccceeeecccccCCCCCccccccCccceeeccccccc
Q 002069 126 YLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSGAIPFSLGNLTNLVTLYIGINALSGSIPNEIGNLKSLSDLRLDYNTLS 205 (973)
Q Consensus 126 ~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~ 205 (973)
+|++|++++ +|... . ++|++|++++|++++. + .+..+++|+.|++++|++++ +| .+..+++|++|++++|+++
T Consensus 91 ~L~~N~l~~-l~~~~-~-~~L~~L~L~~N~l~~~-~-~l~~l~~L~~L~Ls~N~i~~-~~-~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 91 SVNRNRLKN-LNGIP-S-ACLSRLFLDNNELRDT-D-SLIHLKNLEILSIRNNKLKS-IV-MLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp ECCSSCCSC-CTTCC-C-SSCCEEECCSSCCSBS-G-GGTTCTTCCEEECTTSCCCB-CG-GGGGCTTCCEEECTTSCCC
T ss_pred ECCCCccCC-cCccc-c-CcccEEEccCCccCCC-h-hhcCcccccEEECCCCcCCC-Ch-HHccCCCCCEEECCCCcCc
Confidence 999998874 44433 3 8888888888888743 3 57788888888888888874 33 6777888888888888887
Q ss_pred cccccccCCCCcccEEecCCcccCCC
Q 002069 206 GSILYSFGNLTKLEILYLDVNALSGL 231 (973)
Q Consensus 206 ~~~~~~~~~l~~L~~L~L~~n~i~~~ 231 (973)
++ ..+..+++|+.|++++|.++..
T Consensus 164 ~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 164 NT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp BC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred ch--HHhccCCCCCEEeCCCCcccCC
Confidence 65 5677777788888888877765
No 370
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.77 E-value=3.4e-21 Score=225.81 Aligned_cols=203 Identities=22% Similarity=0.212 Sum_probs=122.9
Q ss_pred CCCCCCCEEECCCCcccccCCcCccCCCCCCeeeccCCc-------------CCCCCCCcccCCCCCcEEE-ccCCcCcc
Q 002069 21 GHLTHLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNF-------------LKGSIPPSLGNLTSLIYID-IGNNLLSG 86 (973)
Q Consensus 21 ~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~-------------~~~~~p~~~~~l~~L~~L~-l~~n~l~~ 86 (973)
..+++|+.|+|++|+++ .+|.+|+.+++|+.|++++|. ..+.+|..++.+++|+.|+ ++.|.+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~- 423 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD- 423 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-
Confidence 67899999999999998 679999999999999998875 5567888899999999999 6776543
Q ss_pred cCCccccCccccceeeccCCcCCCCCCCccccCCccceeecccccccccCcccccccCCCCceecccCCCCCCCCccccC
Q 002069 87 SIPNEVGSLKSLSDLRLSNNSLNGSIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSGAIPFSLGN 166 (973)
Q Consensus 87 ~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~ 166 (973)
+|+.+.+++|.++. +|. ..|++|+|++|+|++ +|. |+++++|+.|+|++|.++ .+|..|++
T Consensus 424 ----------~L~~l~l~~n~i~~-l~~-----~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 484 (567)
T 1dce_A 424 ----------DLRSKFLLENSVLK-MEY-----ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAA 484 (567)
T ss_dssp ----------HHHHHHHHHHHHHH-HHH-----TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGG
T ss_pred ----------hhhhhhhhcccccc-cCc-----cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhc
Confidence 33444444444441 111 124445555555542 343 555555555555555554 44445555
Q ss_pred ccccceeeecccccCCCCCccccccCccceeecccccccccc-ccccCCCCcccEEecCCcccCCCCCc---cccccccc
Q 002069 167 LTNLVTLYIGINALSGSIPNEIGNLKSLSDLRLDYNTLSGSI-LYSFGNLTKLEILYLDVNALSGLIPN---EIGNLKSL 242 (973)
Q Consensus 167 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~L~~n~i~~~~~~---~~~~l~~L 242 (973)
+++|+.|+|++|+|++ +| .++++++|++|+|++|+++++. |..|+.+++|+.|+|++|.+++.+|. .+..+++|
T Consensus 485 l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L 562 (567)
T 1dce_A 485 LRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSV 562 (567)
T ss_dssp CTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTC
T ss_pred CCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCccc
Confidence 5555555555555553 34 4555555555555555555544 45555555555555555555544331 12335555
Q ss_pred ccee
Q 002069 243 LALQ 246 (973)
Q Consensus 243 ~~L~ 246 (973)
+.|+
T Consensus 563 ~~L~ 566 (567)
T 1dce_A 563 SSIL 566 (567)
T ss_dssp SEEE
T ss_pred CccC
Confidence 5554
No 371
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.76 E-value=1.8e-19 Score=198.08 Aligned_cols=221 Identities=10% Similarity=0.024 Sum_probs=139.6
Q ss_pred ccccceeeecccccCCCCCccccccCccceeeccccccccccccccCCCCcccEEecCCcc----cCCCCCccccccccc
Q 002069 167 LTNLVTLYIGINALSGSIPNEIGNLKSLSDLRLDYNTLSGSILYSFGNLTKLEILYLDVNA----LSGLIPNEIGNLKSL 242 (973)
Q Consensus 167 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~----i~~~~~~~~~~l~~L 242 (973)
+++|+.|+|.. .++...+.+|.++++|+.+++++|.+..+...+|.++.++..+.+..+. ...+...+|.++.+|
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L 178 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPL 178 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCC
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccccc
Confidence 45555555544 4443334445555555555555555555555555555555555444421 122333445444444
Q ss_pred c-ceecccccc-cCCCCcccCCcchhhhccCCCcccCchhhhhh-ccccccceEEcccccccCCcCchhhcCCccceeec
Q 002069 243 L-ALQLNYNTL-SGSIPCSFGNLTKLVISCLGTNALSSSILEEI-GNLKSLLHLQLNYNTLSGSIPLSLGSLTNLATLYF 319 (973)
Q Consensus 243 ~-~L~L~~N~l-~~~~~~~~~~l~~L~~l~l~~n~i~~~~~~~~-~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 319 (973)
+ .+++....- .......--...++..+.+.++ +.......+ ..+++|+.|++++|+++.+.+.+|.++++|+.+++
T Consensus 179 ~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~-l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l 257 (329)
T 3sb4_A 179 ETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGK-LDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKL 257 (329)
T ss_dssp EEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEEC-CCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEEC
T ss_pred ceeEEecCCCcHHHHHhhcccCccccceEEEeee-ecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEEC
Confidence 4 222221110 0000000001222222333222 222222223 24789999999999999888889999999999999
Q ss_pred cccccCCCCCccccCCCCCC-cEEcCCCCCCCcchhccCCCCCCcEEEccCCcccCCCCcccccccccchhcc
Q 002069 320 STNALSGSIPNEITNLRSLS-DLQLSENTLNGSIPLALGNLTKLVSLDLSINKLSGSIPLSFASLTSLTTLYL 391 (973)
Q Consensus 320 ~~n~l~~~~~~~~~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L 391 (973)
.+| ++.+.+.+|.++++|+ .+++.+ .++.+.+.+|.++++|+.+++++|+++.+.+.+|.++++|+.++.
T Consensus 258 ~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 258 PHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp CTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred Ccc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 998 7778889999999999 999988 788788899999999999999999999889999999999998864
No 372
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.76 E-value=1.4e-18 Score=175.35 Aligned_cols=154 Identities=15% Similarity=0.259 Sum_probs=134.0
Q ss_pred cCCCCCCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCcccCCccccCccccc
Q 002069 20 IGHLTHLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSLS 99 (973)
Q Consensus 20 ~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~ 99 (973)
.+.+++|++|++++|.++ .+| .+..+++|++|++++|.+. . ++.+..+++|++|++++|++++..|..++.+++|+
T Consensus 40 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~-~-~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT-N-YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp HHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS-C-CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred hhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC-c-chhhhcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 367889999999999998 566 6999999999999999776 3 34799999999999999999977888999999999
Q ss_pred eeeccCCcCCCCCCCccccCCccceeeccccc-ccccCcccccccCCCCceecccCCCCCCCCccccCccccceeeeccc
Q 002069 100 DLRLSNNSLNGSIPSSLGNLTNLVTLYLHMNA-LSGSIPDEIGNLKFLSDLQVSYNTLSGAIPFSLGNLTNLVTLYIGIN 178 (973)
Q Consensus 100 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~-l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n 178 (973)
+|++++|++++..|..++.+++|++|++++|+ ++ .+| .+..+++|++|++++|++++ ++ .+..+++|+.|++++|
T Consensus 116 ~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N 191 (197)
T 4ezg_A 116 LLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQ 191 (197)
T ss_dssp EEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC
T ss_pred EEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCc
Confidence 99999999997778889999999999999998 66 555 69999999999999999985 44 7889999999999999
Q ss_pred ccC
Q 002069 179 ALS 181 (973)
Q Consensus 179 ~l~ 181 (973)
++.
T Consensus 192 ~i~ 194 (197)
T 4ezg_A 192 TIG 194 (197)
T ss_dssp ---
T ss_pred ccC
Confidence 986
No 373
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.76 E-value=1e-18 Score=176.52 Aligned_cols=152 Identities=22% Similarity=0.305 Sum_probs=75.5
Q ss_pred cCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCcccCCccccCccccceeeccCCcCCCCCCCccccCCccce
Q 002069 45 GRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSLSDLRLSNNSLNGSIPSSLGNLTNLVT 124 (973)
Q Consensus 45 ~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 124 (973)
+.+++|++|++++|+++ .+| .+..+++|++|++++|.++ .+ ..+..+++|++|++++|++++..|..++.+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~-~~-~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT-NY-NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS-CC-GGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC-cc-hhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 44555555666555555 444 4555555555555555443 22 24555555555555555555444555555555555
Q ss_pred eecccccccccCcccccccCCCCceecccCC-CCCCCCccccCccccceeeecccccCCCCCccccccCccceeeccccc
Q 002069 125 LYLHMNALSGSIPDEIGNLKFLSDLQVSYNT-LSGAIPFSLGNLTNLVTLYIGINALSGSIPNEIGNLKSLSDLRLDYNT 203 (973)
Q Consensus 125 L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~-l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~ 203 (973)
|++++|++++..|..++++++|++|++++|. ++ .+| .+..+++|+.|++++|++++ ++ .+..+++|++|++++|+
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC-
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcc
Confidence 5555555554445555555555555555554 33 222 34444444444444444442 22 33444444444444444
Q ss_pred c
Q 002069 204 L 204 (973)
Q Consensus 204 l 204 (973)
+
T Consensus 193 i 193 (197)
T 4ezg_A 193 I 193 (197)
T ss_dssp -
T ss_pred c
Confidence 3
No 374
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.76 E-value=1.9e-19 Score=217.86 Aligned_cols=186 Identities=24% Similarity=0.234 Sum_probs=89.3
Q ss_pred CCcCCCCCCCcccCCCCCcEEEccCCcCcccCCccccCccccceeeccCCcCCCCCCCccccCCccceeecccccccccC
Q 002069 57 SNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSLSDLRLSNNSLNGSIPSSLGNLTNLVTLYLHMNALSGSI 136 (973)
Q Consensus 57 ~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~ 136 (973)
.|++. ..|+.+..+++|++|+|++|.+. .+|..+..+++|++|+|++|+|+ .+|..|++|++|++|+|++|+|+ .+
T Consensus 210 ~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~l 285 (727)
T 4b8c_D 210 ENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SL 285 (727)
T ss_dssp -------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SC
T ss_pred cccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-cc
Confidence 34444 45566666666666666666666 56666666666666666666666 56666666666666666666666 55
Q ss_pred cccccccCCCCceecccCCCCCCCCccccCccccceeeecccccCCCCCccccccCc-cceeeccccccccccccccCCC
Q 002069 137 PDEIGNLKFLSDLQVSYNTLSGAIPFSLGNLTNLVTLYIGINALSGSIPNEIGNLKS-LSDLRLDYNTLSGSILYSFGNL 215 (973)
Q Consensus 137 p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~~~~~~~l 215 (973)
|..|++|++|++|+|++|.|+ .+|..|+.+++|+.|+|++|.+++.+|..+..+.. +..++|++|.+++..+.
T Consensus 286 p~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~----- 359 (727)
T 4b8c_D 286 PAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH----- 359 (727)
T ss_dssp CSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-----
T ss_pred ChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc-----
Confidence 666666666666666666665 55555666666666666666666666665554322 22356666666654443
Q ss_pred CcccEEecCCc--------ccCCCCCccccccccccceeccccccc
Q 002069 216 TKLEILYLDVN--------ALSGLIPNEIGNLKSLLALQLNYNTLS 253 (973)
Q Consensus 216 ~~L~~L~L~~n--------~i~~~~~~~~~~l~~L~~L~L~~N~l~ 253 (973)
.|+.|+++.| .+.+..+..+..+..+....+++|-+.
T Consensus 360 -~l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~ 404 (727)
T 4b8c_D 360 -ERRFIEINTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTLC 404 (727)
T ss_dssp -C-----------------------------------------CCC
T ss_pred -ccceeEeecccccccccCCccccccchhhcccccceeeeeccccc
Confidence 3444555554 333444445556666666777777664
No 375
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.74 E-value=7.7e-19 Score=212.60 Aligned_cols=151 Identities=28% Similarity=0.307 Sum_probs=81.0
Q ss_pred ccCCcCcccCCccccCccccceeeccCCcCCCCCCCccccCCccceeecccccccccCcccccccCCCCceecccCCCCC
Q 002069 79 IGNNLLSGSIPNEVGSLKSLSDLRLSNNSLNGSIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSG 158 (973)
Q Consensus 79 l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 158 (973)
++.|.+. ..|+.+..+.+|++|+|++|++. .+|..++++++|++|+|++|.|+ .+|..|++|++|++|+|++|+|+
T Consensus 208 ~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~- 283 (727)
T 4b8c_D 208 DIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT- 283 (727)
T ss_dssp ---------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-
T ss_pred cccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-
Confidence 3344444 44555666666666666666665 55555556666666666666665 55666666666666666666666
Q ss_pred CCCccccCccccceeeecccccCCCCCccccccCccceeeccccccccccccccCCCCc-ccEEecCCcccCCCCCc
Q 002069 159 AIPFSLGNLTNLVTLYIGINALSGSIPNEIGNLKSLSDLRLDYNTLSGSILYSFGNLTK-LEILYLDVNALSGLIPN 234 (973)
Q Consensus 159 ~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~L~~n~i~~~~~~ 234 (973)
.+|..|++|++|++|+|++|.|+ .+|..|+++++|++|+|++|.+++..+..+..+.. +..++|++|.+++..|.
T Consensus 284 ~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~ 359 (727)
T 4b8c_D 284 SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH 359 (727)
T ss_dssp SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_pred ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc
Confidence 45666666666666666666665 45555666666666666666666555555543322 12355666666555443
No 376
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.72 E-value=5.6e-18 Score=178.64 Aligned_cols=140 Identities=16% Similarity=0.175 Sum_probs=107.8
Q ss_pred CCcccccccCCCceeEEEEEc-CCCCE--EEEEEcCCCCCc---------------------chhhHHHHHHHHHHhhcC
Q 002069 702 NFDDEHCIGNGGQGSVYKAEL-PTGEI--VAVKKFHSPLPG---------------------EMACQQEFLNEGNALTKI 757 (973)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~-~~~~~--vavK~~~~~~~~---------------------~~~~~~~~~~e~~~l~~l 757 (973)
-|++.+.||+|+||.||+|.. .+|+. ||||+++..... .......+.+|+..+.++
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 467889999999999999977 68888 999997643211 011234688999999999
Q ss_pred CCCce--eeeceeeeccceeEEEEEecCC-C----ChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHh-hCCCCCeEe
Q 002069 758 RHRNI--VKFYGFCSHALHSFVVYEYLEM-G----SLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMH-TNCFPPIVH 829 (973)
Q Consensus 758 ~h~ni--v~~~~~~~~~~~~~lv~e~~~~-~----~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH-~~~~~~i~H 829 (973)
.|+++ +.++++ ...++||||+.+ | +|.++... .++.++..++.|++.|++||| +. +|+|
T Consensus 128 ~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~~---givH 194 (258)
T 1zth_A 128 KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE------LKELDVEGIFNDVVENVKRLYQEA---ELVH 194 (258)
T ss_dssp HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG------GGGSCHHHHHHHHHHHHHHHHHTS---CEEC
T ss_pred HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc------cChHHHHHHHHHHHHHHHHHHHHC---CEEe
Confidence 88764 333432 356899999952 3 66665432 124567889999999999999 87 9999
Q ss_pred ecCCCCCeeecCCCceEEecccccccc
Q 002069 830 RDISSKNVLLNLEYEAHVSDFGISKFL 856 (973)
Q Consensus 830 ~Dlk~~Nill~~~~~~kl~Dfg~a~~~ 856 (973)
|||||+||+++. .++|+|||+|...
T Consensus 195 rDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 195 ADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp SSCSTTSEEESS--SEEECCCTTCEET
T ss_pred CCCCHHHEEEcC--cEEEEECcccccC
Confidence 999999999998 9999999999754
No 377
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.72 E-value=1.8e-17 Score=166.37 Aligned_cols=130 Identities=24% Similarity=0.341 Sum_probs=88.4
Q ss_pred cEEeCCCCCCCCCCCcccCCCCCCCEEECCCCcccccCCc-CccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccC
Q 002069 3 KVLGLSFNQFSGSIPPEIGHLTHLKLLSFSKNQLSGLIPH-EIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGN 81 (973)
Q Consensus 3 ~~L~l~~~~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~-~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~ 81 (973)
+++++++|+++ .+|+.+.. +|++|+|++|++++..|. .|+.+++|++|+|++|++++..|..|+++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 46777777775 67766544 677777777777655443 366777777777777777766666777777777777777
Q ss_pred CcCcccCCccccCccccceeeccCCcCCCCCCCccccCCccceeeccccccccc
Q 002069 82 NLLSGSIPNEVGSLKSLSDLRLSNNSLNGSIPSSLGNLTNLVTLYLHMNALSGS 135 (973)
Q Consensus 82 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ 135 (973)
|++++..|..|..+++|++|+|++|++++..|..|..+++|++|+|++|.+++.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 141 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCc
Confidence 777765566666677777777777777666666666677777777777666643
No 378
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.69 E-value=8.6e-17 Score=180.16 Aligned_cols=265 Identities=11% Similarity=0.075 Sum_probs=124.7
Q ss_pred CCCCceecccCCCCCCCCccccCccccceeeecccccCCCCCccccccCccceeeccccccccccccccCCCCcccEEec
Q 002069 144 KFLSDLQVSYNTLSGAIPFSLGNLTNLVTLYIGINALSGSIPNEIGNLKSLSDLRLDYNTLSGSILYSFGNLTKLEILYL 223 (973)
Q Consensus 144 ~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 223 (973)
..++.+.+.+ .++.+...+|.+. +|+.+.+..+ ++.....+|.++ +|+.+.+.. .++.+...+|.+|++|+.+++
T Consensus 113 ~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l 187 (401)
T 4fdw_A 113 KGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADL 187 (401)
T ss_dssp SSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEEC
T ss_pred CCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeec
Confidence 4444444443 2332334444442 4555554433 332333334432 344444443 344444444444444444444
Q ss_pred CCcccCCCCCccccccccccceecccccccCCCCcccCCcchhhhccCCCcccCchhhhhhccccccceEEcccccccCC
Q 002069 224 DVNALSGLIPNEIGNLKSLLALQLNYNTLSGSIPCSFGNLTKLVISCLGTNALSSSILEEIGNLKSLLHLQLNYNTLSGS 303 (973)
Q Consensus 224 ~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~ 303 (973)
.+|.++.+...+|. ..+|+.+.+..+ +..+...+|.++++|+.+++..| ++.+
T Consensus 188 ~~n~l~~I~~~aF~-~~~L~~l~lp~~-------------------------l~~I~~~aF~~~~~L~~l~l~~~-l~~I 240 (401)
T 4fdw_A 188 SKTKITKLPASTFV-YAGIEEVLLPVT-------------------------LKEIGSQAFLKTSQLKTIEIPEN-VSTI 240 (401)
T ss_dssp TTSCCSEECTTTTT-TCCCSEEECCTT-------------------------CCEECTTTTTTCTTCCCEECCTT-CCEE
T ss_pred CCCcceEechhhEe-ecccCEEEeCCc-------------------------hheehhhHhhCCCCCCEEecCCC-ccCc
Confidence 44444444444443 234444444322 33334444445555555555443 3334
Q ss_pred cCchhhcCCccceeeccccccCCCCCccccCCCCCCcEEcCCCCCC-----CcchhccCCCCCCcEEEccCCcccCCCCc
Q 002069 304 IPLSLGSLTNLATLYFSTNALSGSIPNEITNLRSLSDLQLSENTLN-----GSIPLALGNLTKLVSLDLSINKLSGSIPL 378 (973)
Q Consensus 304 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-----~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~ 378 (973)
...+|.+ .+|+.+.+ .+.++.+...+|.++++|+.+++.+|.+. .+.+.+|.++++|+.++|. +.++.+...
T Consensus 241 ~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~ 317 (401)
T 4fdw_A 241 GQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQG 317 (401)
T ss_dssp CTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTT
T ss_pred ccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhh
Confidence 4444444 45555555 23344344555555555555555554443 2344555566666666665 335545555
Q ss_pred ccccccccchhcccccccccCCCcccCCCCCCCEEEccCCCCCCCcchhhhhhcccceEEEeeCccc
Q 002069 379 SFASLTSLTTLYLYENSLCDSIPKEIGDMKSLSILDLSSNKLNGSIPLSLANLTNSLKVLYLSSNHI 445 (973)
Q Consensus 379 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~L~~n~l 445 (973)
+|.+|++|+.+.|..| ++.....+|.++ +|+.+++++|.+....+..|.+...+++.|++..+.+
T Consensus 318 aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 318 LLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESV 382 (401)
T ss_dssp TTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGH
T ss_pred hhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHH
Confidence 5666666666666433 444455556665 5666666666554333333333333455555554443
No 379
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.69 E-value=6.4e-17 Score=162.28 Aligned_cols=131 Identities=24% Similarity=0.309 Sum_probs=99.3
Q ss_pred CEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCC-cccCCCCCcEEEccCCcCcccCCccccCccccceeeccC
Q 002069 27 KLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPP-SLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSLSDLRLSN 105 (973)
Q Consensus 27 ~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~-~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~ 105 (973)
+++++++|+++ .+|..+.. +|++|++++|++++..|. .|+.+++|++|+|++|++++..|..|+.+++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 67888888886 56766654 788888888888744433 377888888888888888866677788888888888888
Q ss_pred CcCCCCCCCccccCCccceeecccccccccCcccccccCCCCceecccCCCCCCC
Q 002069 106 NSLNGSIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSGAI 160 (973)
Q Consensus 106 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 160 (973)
|++++..|..|.++++|++|+|++|++++..|..|..+++|++|++++|.+++..
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 142 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNC 142 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcC
Confidence 8887666666777888888888888887777777777777777777777776543
No 380
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.69 E-value=1.6e-16 Score=178.07 Aligned_cols=268 Identities=12% Similarity=0.090 Sum_probs=201.7
Q ss_pred ccCCccceeecccccccccCcccccccCCCCceecccCCCCCCCCccccCccccceeeecccccCCCCCccccccCccce
Q 002069 117 GNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSGAIPFSLGNLTNLVTLYIGINALSGSIPNEIGNLKSLSD 196 (973)
Q Consensus 117 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~ 196 (973)
..+..++.+.+.+ .++.+...+|.++ +|+.+.+..| ++.+...+|.+. +|+.+.+.. .++...+.+|.++++|+.
T Consensus 110 ~~~~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~ 184 (401)
T 4fdw_A 110 EILKGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKK 184 (401)
T ss_dssp EECSSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCE
T ss_pred EecCCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCe
Confidence 3447788888874 5665667788886 7999999877 776777888884 799999986 677567789999999999
Q ss_pred eeccccccccccccccCCCCcccEEecCCcccCCCCCccccccccccceecccccccCCCCcccCCcchhhhccCCCccc
Q 002069 197 LRLDYNTLSGSILYSFGNLTKLEILYLDVNALSGLIPNEIGNLKSLLALQLNYNTLSGSIPCSFGNLTKLVISCLGTNAL 276 (973)
Q Consensus 197 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~n~i 276 (973)
++++.|+++.++..+|. +.+|+.+.+..+ ++.+...+|.++++|+.+++..| ++.+...+|.+
T Consensus 185 l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-------------- 247 (401)
T 4fdw_A 185 ADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-------------- 247 (401)
T ss_dssp EECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT--------------
T ss_pred eecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc--------------
Confidence 99999999999999998 589999999855 88888899999999999999865 55455555544
Q ss_pred CchhhhhhccccccceEEcccccccCCcCchhhcCCccceeeccccccC-----CCCCccccCCCCCCcEEcCCCCCCCc
Q 002069 277 SSSILEEIGNLKSLLHLQLNYNTLSGSIPLSLGSLTNLATLYFSTNALS-----GSIPNEITNLRSLSDLQLSENTLNGS 351 (973)
Q Consensus 277 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-----~~~~~~~~~l~~L~~L~L~~N~l~~~ 351 (973)
.+|+.+.+ .+.++.+...+|.++++|+.+++.+|.+. .+.+.+|.++++|+.++|. +.++.+
T Consensus 248 -----------~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I 314 (401)
T 4fdw_A 248 -----------SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRIL 314 (401)
T ss_dssp -----------CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEE
T ss_pred -----------CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEE
Confidence 34555555 33444455566666666666666665543 3556677788888888887 446666
Q ss_pred chhccCCCCCCcEEEccCCcccCCCCcccccccccchhcccccccccCCCcccCCCC-CCCEEEccCCCCC
Q 002069 352 IPLALGNLTKLVSLDLSINKLSGSIPLSFASLTSLTTLYLYENSLCDSIPKEIGDMK-SLSILDLSSNKLN 421 (973)
Q Consensus 352 ~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~ 421 (973)
...+|.++++|+.++|..| ++.+...+|.++ +|+.+++++|.+.......|.+++ +++.|.+..+.+.
T Consensus 315 ~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 315 GQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp CTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred hhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 6777888888888888554 666777788888 888888888877777777777774 6778887776543
No 381
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.67 E-value=1.4e-16 Score=156.27 Aligned_cols=133 Identities=22% Similarity=0.185 Sum_probs=94.4
Q ss_pred CCCCCCEEECCCCccc-ccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCcccCCccccCccccce
Q 002069 22 HLTHLKLLSFSKNQLS-GLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSLSD 100 (973)
Q Consensus 22 ~l~~L~~L~l~~n~l~-~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~ 100 (973)
..++|++|++++|+++ +.+|..+..+++|++|++++|.+++. ..++.+++|++|++++|++++.+|..++.+++|++
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 3466778888888776 56677777777777777777777743 66777777777777777777556666666777777
Q ss_pred eeccCCcCCCCCC--CccccCCccceeecccccccccCc---ccccccCCCCceecccCCCC
Q 002069 101 LRLSNNSLNGSIP--SSLGNLTNLVTLYLHMNALSGSIP---DEIGNLKFLSDLQVSYNTLS 157 (973)
Q Consensus 101 L~L~~n~l~~~~p--~~~~~l~~L~~L~L~~n~l~~~~p---~~~~~l~~L~~L~l~~N~l~ 157 (973)
|+|++|++++ +| ..+..+++|++|++++|++++..+ ..|..+++|++|++++|.+.
T Consensus 100 L~Ls~N~l~~-~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 100 LNLSGNKLKD-ISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp EECBSSSCCS-SGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred EeccCCccCc-chhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 7777777773 33 567777777777777777764333 36667777777777777665
No 382
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.66 E-value=1.1e-16 Score=156.97 Aligned_cols=133 Identities=22% Similarity=0.259 Sum_probs=120.9
Q ss_pred CcEEeCCCCCCC-CCCCcccCCCCCCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEcc
Q 002069 2 LKVLGLSFNQFS-GSIPPEIGHLTHLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIG 80 (973)
Q Consensus 2 l~~L~l~~~~l~-~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~ 80 (973)
|++|+|++|+++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|++++|++.+.+|..++.+++|++|+++
T Consensus 26 L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 103 (168)
T 2ell_A 26 VRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLS 103 (168)
T ss_dssp CSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECB
T ss_pred CCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEecc
Confidence 789999999998 78999999999999999999999965 789999999999999999997688888889999999999
Q ss_pred CCcCcccCC--ccccCccccceeeccCCcCCCCCCC----ccccCCccceeecccccccccCccc
Q 002069 81 NNLLSGSIP--NEVGSLKSLSDLRLSNNSLNGSIPS----SLGNLTNLVTLYLHMNALSGSIPDE 139 (973)
Q Consensus 81 ~n~l~~~~p--~~~~~l~~L~~L~L~~n~l~~~~p~----~~~~l~~L~~L~L~~n~l~~~~p~~ 139 (973)
+|+++ .+| ..+..+++|++|++++|.+++ .|. .+..+++|++|++++|.+. ..|++
T Consensus 104 ~N~l~-~~~~~~~l~~l~~L~~L~l~~N~l~~-~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~~ 165 (168)
T 2ell_A 104 GNKLK-DISTLEPLKKLECLKSLDLFNCEVTN-LNDYRESVFKLLPQLTYLDGYDREDQ-EAPDS 165 (168)
T ss_dssp SSSCC-SSGGGGGGSSCSCCCEEECCSSGGGT-STTHHHHHHTTCSSCCEETTEETTSC-BCCSS
T ss_pred CCccC-cchhHHHHhcCCCCCEEEeeCCcCcc-hHHHHHHHHHhCccCcEecCCCCChh-hcccc
Confidence 99998 454 789999999999999999995 555 8999999999999999987 55654
No 383
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.66 E-value=6e-16 Score=155.10 Aligned_cols=127 Identities=28% Similarity=0.353 Sum_probs=63.4
Q ss_pred CEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCcccCCccccCccccceeeccCC
Q 002069 27 KLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSLSDLRLSNN 106 (973)
Q Consensus 27 ~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n 106 (973)
+++++++|+++ .+|..+. ++|++|++++|+++ .+|..|.++++|++|+|++|++++..|..|..+++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 34455555544 3343332 34555555555554 44455555555555555555555433444555555555555555
Q ss_pred cCCCCCCCccccCCccceeecccccccccCcccccccCCCCceecccCCCC
Q 002069 107 SLNGSIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLS 157 (973)
Q Consensus 107 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~ 157 (973)
++++..|..|.++++|++|+|++|+|+...+..|..+++|+.|++++|.+.
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 555444444555555555555555555333334555555555555555543
No 384
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.64 E-value=2.7e-15 Score=168.99 Aligned_cols=315 Identities=11% Similarity=-0.020 Sum_probs=180.0
Q ss_pred ccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCcccCCccccCccccceeeccCCcCCCCCCCc
Q 002069 36 LSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSLSDLRLSNNSLNGSIPSS 115 (973)
Q Consensus 36 l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~ 115 (973)
++.+-...|.++.+|+.+.+.++ ++.+-..+|.++++|+.+++.++ ++..-...|..+.+|+.+.+..+ +...-...
T Consensus 59 VtsIg~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~a 135 (394)
T 4fs7_A 59 VVSIGYAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEA 135 (394)
T ss_dssp EEEECTTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTT
T ss_pred EeEhHHHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeeccee
Confidence 44444556777888888888744 65344567888888888888765 44344456777788888777654 33244556
Q ss_pred cccCCccceeecccccccccCcccccccCCCCceecccCCCCCCCCccccCccccceeeecccccCCCCCccccccCccc
Q 002069 116 LGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSGAIPFSLGNLTNLVTLYIGINALSGSIPNEIGNLKSLS 195 (973)
Q Consensus 116 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~ 195 (973)
|.++..++....... ......+|.++++|+.+.+..+..+ +....|.++.+|+.+.+..| ++......|.++..|+
T Consensus 136 F~~~~~~~~~~~~~~--~~i~~~aF~~c~~L~~i~l~~~~~~-I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~ 211 (394)
T 4fs7_A 136 FKGCDFKEITIPEGV--TVIGDEAFATCESLEYVSLPDSMET-LHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLE 211 (394)
T ss_dssp TTTCCCSEEECCTTC--CEECTTTTTTCTTCCEEECCTTCCE-ECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCC
T ss_pred eecccccccccCccc--cccchhhhcccCCCcEEecCCccce-eccccccCCCCceEEEcCCC-ceEeCchhhccccccc
Confidence 666654443333222 2234567888888888888765433 55677888888888888766 4435566778888888
Q ss_pred eeeccccccccccccccCCCCcccEEecCCcccCCCCCccccccccccceecccccccCCCCcccCCcchhhhccCCCcc
Q 002069 196 DLRLDYNTLSGSILYSFGNLTKLEILYLDVNALSGLIPNEIGNLKSLLALQLNYNTLSGSIPCSFGNLTKLVISCLGTNA 275 (973)
Q Consensus 196 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~n~ 275 (973)
.+.+..+... +. +.+....+|+.+.+..+ ++.+...+|.+..+|+.+.+..+... +....|.+...++......+.
T Consensus 212 ~i~~~~~~~~-i~-~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~ 287 (394)
T 4fs7_A 212 NMEFPNSLYY-LG-DFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVI 287 (394)
T ss_dssp BCCCCTTCCE-EC-TTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSE
T ss_pred eeecCCCceE-ee-hhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCcee
Confidence 8887766543 22 23344567888877643 34455677888888888888766443 445555555544444333322
Q ss_pred cCchhhhhhccccccceEEcccccccCCcCchhhcCCccceeeccccccCCCCCccccCCCCCCcEEcCCCCCCCcchhc
Q 002069 276 LSSSILEEIGNLKSLLHLQLNYNTLSGSIPLSLGSLTNLATLYFSTNALSGSIPNEITNLRSLSDLQLSENTLNGSIPLA 355 (973)
Q Consensus 276 i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 355 (973)
+ ....|..+.+|+.+.+..+ ++.+...+|.++++|+.+++.++ ++.+...+|.++.+|+.+.+..| ++.+...+
T Consensus 288 i---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~a 361 (394)
T 4fs7_A 288 V---PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANA 361 (394)
T ss_dssp E---CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTT
T ss_pred e---ccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHH
Confidence 2 1233444444555444432 33233344444444444444322 33233344444444444444333 33333344
Q ss_pred cCCCCCCcEEEc
Q 002069 356 LGNLTKLVSLDL 367 (973)
Q Consensus 356 ~~~l~~L~~L~L 367 (973)
|.++++|+.+++
T Consensus 362 F~~C~~L~~i~l 373 (394)
T 4fs7_A 362 FQGCINLKKVEL 373 (394)
T ss_dssp BTTCTTCCEEEE
T ss_pred hhCCCCCCEEEE
Confidence 444444444444
No 385
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.64 E-value=1.3e-15 Score=171.71 Aligned_cols=62 Identities=15% Similarity=0.202 Sum_probs=33.1
Q ss_pred CccccccCccceeeccccccccccccccCCCCcccEEecCCcccCCCCCccccccccccceecc
Q 002069 185 PNEIGNLKSLSDLRLDYNTLSGSILYSFGNLTKLEILYLDVNALSGLIPNEIGNLKSLLALQLN 248 (973)
Q Consensus 185 p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~ 248 (973)
..+|.++.+|+.+.+.. .++.+...+|.++++|+.+++.++ ++.+...+|.++.+|+.+.+.
T Consensus 64 ~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p 125 (394)
T 4fs7_A 64 YAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLP 125 (394)
T ss_dssp TTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCC
T ss_pred HHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhccc
Confidence 34555555666665543 255555555666666666655433 444444555555555555444
No 386
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.64 E-value=3e-16 Score=150.45 Aligned_cols=128 Identities=21% Similarity=0.201 Sum_probs=96.1
Q ss_pred CCCCCEEECCCCccc-ccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCcccCCccccCcccccee
Q 002069 23 LTHLKLLSFSKNQLS-GLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSLSDL 101 (973)
Q Consensus 23 l~~L~~L~l~~n~l~-~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L 101 (973)
.++|++|++++|.++ +.+|..+..+++|++|++++|++++. ..++.+++|++|++++|++++.+|..++.+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 467888888888887 56777778888888888888888744 667888888888888888875577777778888888
Q ss_pred eccCCcCCCC-CCCccccCCccceeecccccccccCc---ccccccCCCCceecc
Q 002069 102 RLSNNSLNGS-IPSSLGNLTNLVTLYLHMNALSGSIP---DEIGNLKFLSDLQVS 152 (973)
Q Consensus 102 ~L~~n~l~~~-~p~~~~~l~~L~~L~L~~n~l~~~~p---~~~~~l~~L~~L~l~ 152 (973)
++++|++++. .|..++.+++|++|++++|++++..+ ..++.+++|++|+++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 8888888742 23677778888888888888775443 367777777777765
No 387
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.63 E-value=1e-15 Score=153.44 Aligned_cols=126 Identities=28% Similarity=0.332 Sum_probs=63.2
Q ss_pred eeeccCCcCCCCCCCcccCCCCCcEEEccCCcCcccCCccccCccccceeeccCCcCCCCCCCccccCCccceeeccccc
Q 002069 52 GLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSLSDLRLSNNSLNGSIPSSLGNLTNLVTLYLHMNA 131 (973)
Q Consensus 52 ~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~ 131 (973)
++++++|+++ .+|..+. ++|++|+|++|+++ .+|..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 4555555554 4444332 34555555555554 444555555555555555555554444445555555555555555
Q ss_pred ccccCcccccccCCCCceecccCCCCCCCCccccCccccceeeecccccC
Q 002069 132 LSGSIPDEIGNLKFLSDLQVSYNTLSGAIPFSLGNLTNLVTLYIGINALS 181 (973)
Q Consensus 132 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~ 181 (973)
|++..|..|.++++|++|+|++|+++...+..|..+++|+.|++++|.+.
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 55444444555555555555555555443444555555555555555444
No 388
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.63 E-value=2e-15 Score=149.33 Aligned_cols=127 Identities=24% Similarity=0.303 Sum_probs=61.1
Q ss_pred EEeCCCCCCCCCCCcccCCCCCCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCc
Q 002069 4 VLGLSFNQFSGSIPPEIGHLTHLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNL 83 (973)
Q Consensus 4 ~L~l~~~~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~ 83 (973)
.+++++++++ .+|..+. ++|++|++++|++++..+..+..+++|++|++++|++++..+..|+.+++|++|++++|+
T Consensus 11 ~l~~~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 87 (177)
T 2o6r_A 11 EIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENK 87 (177)
T ss_dssp EEECCSSCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEecCCCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCC
Confidence 4555555554 4454332 455555555555554433344555555555555555553333334555555555555555
Q ss_pred CcccCCccccCccccceeeccCCcCCCCCCCccccCCccceeeccccccc
Q 002069 84 LSGSIPNEVGSLKSLSDLRLSNNSLNGSIPSSLGNLTNLVTLYLHMNALS 133 (973)
Q Consensus 84 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~ 133 (973)
+++..+..+..+++|++|++++|++++..+..+..+++|++|+|++|.+.
T Consensus 88 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 137 (177)
T 2o6r_A 88 LQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWD 137 (177)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred ccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCee
Confidence 55333333444555555555555554322233344455555555555444
No 389
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.63 E-value=2.7e-16 Score=150.82 Aligned_cols=126 Identities=19% Similarity=0.202 Sum_probs=114.0
Q ss_pred CcEEeCCCCCCC-CCCCcccCCCCCCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEcc
Q 002069 2 LKVLGLSFNQFS-GSIPPEIGHLTHLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIG 80 (973)
Q Consensus 2 l~~L~l~~~~l~-~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~ 80 (973)
|+.|++++|+++ +.+|+.+..+++|++|++++|.+++. ..++.+++|++|++++|++++.+|..++.+++|++|+++
T Consensus 19 l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls 96 (149)
T 2je0_A 19 VKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLS 96 (149)
T ss_dssp CSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECT
T ss_pred CeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECC
Confidence 789999999998 78999999999999999999999965 789999999999999999997689888899999999999
Q ss_pred CCcCccc-CCccccCccccceeeccCCcCCCCCC---CccccCCccceeeccc
Q 002069 81 NNLLSGS-IPNEVGSLKSLSDLRLSNNSLNGSIP---SSLGNLTNLVTLYLHM 129 (973)
Q Consensus 81 ~n~l~~~-~p~~~~~l~~L~~L~L~~n~l~~~~p---~~~~~l~~L~~L~L~~ 129 (973)
+|++++. .|..++.+++|++|++++|++++..+ ..+..+++|++|++++
T Consensus 97 ~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 97 GNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp TSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 9999852 34889999999999999999995444 4799999999999863
No 390
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.61 E-value=3.6e-16 Score=170.13 Aligned_cols=143 Identities=10% Similarity=0.095 Sum_probs=101.2
Q ss_pred cCCcccccccCCCceeEEEEEcCCCCEEEEEEcCCCCCc---------------chh----hHHHHHHHHHHhhcCCCCc
Q 002069 701 KNFDDEHCIGNGGQGSVYKAELPTGEIVAVKKFHSPLPG---------------EMA----CQQEFLNEGNALTKIRHRN 761 (973)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~---------------~~~----~~~~~~~e~~~l~~l~h~n 761 (973)
.-|++.++||+|+||.||+|...+|+.||||+++..... ... .+.....|...+.++.+.+
T Consensus 95 ~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g 174 (397)
T 4gyi_A 95 DVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG 174 (397)
T ss_dssp SCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 348999999999999999999889999999987532110 000 0111234555555554433
Q ss_pred eeeeceeeeccceeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecC
Q 002069 762 IVKFYGFCSHALHSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNL 841 (973)
Q Consensus 762 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~ 841 (973)
+....-+.. ...++||||++|+++.++... .....++.|++.++.|||+. |||||||||.|||+++
T Consensus 175 v~vp~p~~~--~~~~LVME~i~G~~L~~l~~~---------~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~ 240 (397)
T 4gyi_A 175 FPVPEPIAQ--SRHTIVMSLVDALPMRQVSSV---------PDPASLYADLIALILRLAKH---GLIHGDFNEFNILIRE 240 (397)
T ss_dssp CSCCCEEEE--ETTEEEEECCSCEEGGGCCCC---------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEE
T ss_pred CCCCeeeec--cCceEEEEecCCccHhhhccc---------HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeC
Confidence 322111111 234799999999888765321 23456889999999999998 9999999999999988
Q ss_pred CCc----------eEEeccccccccc
Q 002069 842 EYE----------AHVSDFGISKFLK 857 (973)
Q Consensus 842 ~~~----------~kl~Dfg~a~~~~ 857 (973)
++. +.|+||+.+....
T Consensus 241 dgd~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 241 EKDAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp EECSSCTTSEEEEEEECCCTTCEETT
T ss_pred CCCcccccccccceEEEEeCCcccCC
Confidence 763 8999999887544
No 391
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.60 E-value=5.2e-15 Score=146.39 Aligned_cols=130 Identities=23% Similarity=0.207 Sum_probs=78.6
Q ss_pred CCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCcccCCccccCccccceeeccC
Q 002069 26 LKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSLSDLRLSN 105 (973)
Q Consensus 26 L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~ 105 (973)
.+.+++++|+++ .+|..+. ++|++|++++|++++..+..|+.+++|++|++++|++++..+..++.+++|++|++++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 466777777776 3454332 5667777777776644444566666677777776666644444456666666666666
Q ss_pred CcCCCCCCCccccCCccceeecccccccccCcccccccCCCCceecccCCCCC
Q 002069 106 NSLNGSIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSG 158 (973)
Q Consensus 106 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 158 (973)
|++++..+..+.++++|++|++++|++++..+..|.++++|++|++++|.+++
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 138 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 138 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeec
Confidence 66664444455666666666666666664433445556666666666665553
No 392
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.57 E-value=2.3e-17 Score=166.63 Aligned_cols=153 Identities=25% Similarity=0.349 Sum_probs=98.3
Q ss_pred CCCCCCEEECCCCcccccCCc------CccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCcccCCccccCc
Q 002069 22 HLTHLKLLSFSKNQLSGLIPH------EIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNEVGSL 95 (973)
Q Consensus 22 ~l~~L~~L~l~~n~l~~~~p~------~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l 95 (973)
....++.++++.+.+.+..|. .+..+++|++|++++|+++ .+| .++.+++|++|++++|+++ .+|..+..+
T Consensus 16 ~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~-~l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~ 92 (198)
T 1ds9_A 16 ERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIE-KIS-SLSGMENLRILSLGRNLIK-KIENLDAVA 92 (198)
T ss_dssp HTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEES-CCC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHH
T ss_pred hcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCc-ccc-ccccCCCCCEEECCCCCcc-cccchhhcC
Confidence 344555566666666655555 6666777777777777776 355 6667777777777777776 566666666
Q ss_pred cccceeeccCCcCCCCCCCccccCCccceeecccccccccCc-ccccccCCCCceecccCCCCCCCCcc----------c
Q 002069 96 KSLSDLRLSNNSLNGSIPSSLGNLTNLVTLYLHMNALSGSIP-DEIGNLKFLSDLQVSYNTLSGAIPFS----------L 164 (973)
Q Consensus 96 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~----------l 164 (973)
++|++|++++|++++ +| .+..+++|++|++++|++++..+ +.+..+++|++|++++|.+++..|.. +
T Consensus 93 ~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~ 170 (198)
T 1ds9_A 93 DTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVV 170 (198)
T ss_dssp HHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHH
T ss_pred CcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHH
Confidence 677777777777763 44 56667777777777777763222 35667777777777777766544432 6
Q ss_pred cCccccceeeecccccC
Q 002069 165 GNLTNLVTLYIGINALS 181 (973)
Q Consensus 165 ~~l~~L~~L~l~~n~l~ 181 (973)
..+++|+.|+ +|.++
T Consensus 171 ~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 171 KRLPNLKKLD--GMPVD 185 (198)
T ss_dssp HHCSSCSEEC--CGGGT
T ss_pred HhCCCcEEEC--CcccC
Confidence 6677777765 55554
No 393
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.56 E-value=4e-17 Score=164.87 Aligned_cols=133 Identities=23% Similarity=0.262 Sum_probs=80.5
Q ss_pred ccCCCCCCeeeccCCcCCCCCCC------cccCCCCCcEEEccCCcCcccCCccccCccccceeeccCCcCCCCCCCccc
Q 002069 44 IGRLSSLNGLSLYSNFLKGSIPP------SLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSLSDLRLSNNSLNGSIPSSLG 117 (973)
Q Consensus 44 ~~~l~~L~~L~l~~n~~~~~~p~------~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~ 117 (973)
+.....++.++++.+.+.+.+|. .++.+++|++|++++|+++ .+| .+..+++|++|++++|+++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~-~l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIE-KIS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEES-CCC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCc-ccc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 44556777777777777766665 6666666666666666666 355 6666666666666666666 5666666
Q ss_pred cCCccceeecccccccccCcccccccCCCCceecccCCCCCCCC-ccccCccccceeeecccccC
Q 002069 118 NLTNLVTLYLHMNALSGSIPDEIGNLKFLSDLQVSYNTLSGAIP-FSLGNLTNLVTLYIGINALS 181 (973)
Q Consensus 118 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~l~~l~~L~~L~l~~n~l~ 181 (973)
.+++|++|+|++|++++ +| .++++++|++|++++|++++..+ ..+..+++|+.|++++|.+.
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~ 153 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLY 153 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHH
T ss_pred cCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccc
Confidence 66666666666666653 33 45555666666666665553211 24444555555555555544
No 394
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.55 E-value=5.6e-15 Score=145.90 Aligned_cols=134 Identities=18% Similarity=0.203 Sum_probs=89.9
Q ss_pred cccCCCCCCCEEECCCCcccccCCcCccCCC-CCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCcccCCccccCcc
Q 002069 18 PEIGHLTHLKLLSFSKNQLSGLIPHEIGRLS-SLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNEVGSLK 96 (973)
Q Consensus 18 ~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~-~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~ 96 (973)
+.+..+.+|++|++++|++++ +|. +..+. +|++|++++|++++ + +.|+.+++|++|++++|++++..|..++.++
T Consensus 13 ~~~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~-~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 88 (176)
T 1a9n_A 13 AQYTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRK-L-DGFPLLRRLKTLLVNNNRICRIGEGLDQALP 88 (176)
T ss_dssp CEEECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCE-E-CCCCCCSSCCEEECCSSCCCEECSCHHHHCT
T ss_pred HhcCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCc-c-cccccCCCCCEEECCCCcccccCcchhhcCC
Confidence 345667777777777777774 443 44444 77777777777773 3 5677777777777777777743333346777
Q ss_pred ccceeeccCCcCCCCCCC--ccccCCccceeecccccccccCccc----ccccCCCCceecccCCCC
Q 002069 97 SLSDLRLSNNSLNGSIPS--SLGNLTNLVTLYLHMNALSGSIPDE----IGNLKFLSDLQVSYNTLS 157 (973)
Q Consensus 97 ~L~~L~L~~n~l~~~~p~--~~~~l~~L~~L~L~~n~l~~~~p~~----~~~l~~L~~L~l~~N~l~ 157 (973)
+|++|+|++|++. .+|. .+..+++|++|++++|.++ ..|.. ++.+++|+.|++++|.+.
T Consensus 89 ~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 89 DLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp TCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 7777777777775 5565 6777777777777777776 44543 666666777766666543
No 395
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.54 E-value=5.7e-15 Score=145.87 Aligned_cols=132 Identities=20% Similarity=0.198 Sum_probs=63.9
Q ss_pred ccCCCCCcEEEccCCcCcccCCccccCcc-ccceeeccCCcCCCCCCCccccCCccceeecccccccccCcccccccCCC
Q 002069 68 LGNLTSLIYIDIGNNLLSGSIPNEVGSLK-SLSDLRLSNNSLNGSIPSSLGNLTNLVTLYLHMNALSGSIPDEIGNLKFL 146 (973)
Q Consensus 68 ~~~l~~L~~L~l~~n~l~~~~p~~~~~l~-~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L 146 (973)
+.++.+|++|++++|+++ .+|. +..+. +|++|++++|++++ + ..++.+++|++|+|++|++++..+..|+++++|
T Consensus 15 ~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~-~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRK-L-DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCE-E-CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred cCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCc-c-cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 334444444444444444 2332 22222 45555555555442 2 344455555555555555543222333555555
Q ss_pred CceecccCCCCCCCCc--cccCccccceeeecccccCCCCCcc----ccccCccceeeccccccc
Q 002069 147 SDLQVSYNTLSGAIPF--SLGNLTNLVTLYIGINALSGSIPNE----IGNLKSLSDLRLDYNTLS 205 (973)
Q Consensus 147 ~~L~l~~N~l~~~~p~--~l~~l~~L~~L~l~~n~l~~~~p~~----~~~l~~L~~L~L~~N~l~ 205 (973)
++|++++|+++ .+|. .+..+++|+.|++++|.++ .+|.. +..+++|+.|+++.|.+.
T Consensus 91 ~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 91 TELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 55555555554 2332 4555555555555555555 33442 556666666666666554
No 396
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.48 E-value=1.8e-13 Score=134.02 Aligned_cols=106 Identities=25% Similarity=0.328 Sum_probs=70.0
Q ss_pred CCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCcccCCccccCccccceeeccC
Q 002069 26 LKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSLSDLRLSN 105 (973)
Q Consensus 26 L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~ 105 (973)
.++|++++|+++ .+|..+. ++|++|+|++|+|++..|..|+++++|++|+|++|++++..|..|..+++|++|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 456666666666 3555553 6667777777777655566677777777777777777644444556777777777777
Q ss_pred CcCCCCCCCccccCCccceeecccccccc
Q 002069 106 NSLNGSIPSSLGNLTNLVTLYLHMNALSG 134 (973)
Q Consensus 106 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~ 134 (973)
|++++..|..|.++++|++|+|++|+++.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 77775444557777777777777777663
No 397
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.47 E-value=1.2e-13 Score=135.64 Aligned_cols=104 Identities=23% Similarity=0.308 Sum_probs=68.0
Q ss_pred CEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCcccCCccccCccccceeeccCC
Q 002069 27 KLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSLSDLRLSNN 106 (973)
Q Consensus 27 ~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n 106 (973)
+.+++++|+++ .+|..+. ++|++|+|++|++++..|..|+++++|++|+|++|++++..+..|..+++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 56666666665 4565554 66677777777776555666777777777777777776433334566777777777777
Q ss_pred cCCCCCCCccccCCccceeeccccccc
Q 002069 107 SLNGSIPSSLGNLTNLVTLYLHMNALS 133 (973)
Q Consensus 107 ~l~~~~p~~~~~l~~L~~L~L~~n~l~ 133 (973)
+|++..+..|..+++|++|+|++|.+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc
Confidence 776443444667777777777777766
No 398
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.46 E-value=2.8e-13 Score=132.56 Aligned_cols=104 Identities=28% Similarity=0.340 Sum_probs=50.1
Q ss_pred cEEeCCCCCCCCCCCcccCCCCCCCEEECCCCcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccCC
Q 002069 3 KVLGLSFNQFSGSIPPEIGHLTHLKLLSFSKNQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNN 82 (973)
Q Consensus 3 ~~L~l~~~~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n 82 (973)
+++|+++|+++ .+|+.+. ++|++|+|++|+|++..|..|..+++|++|+|++|++++..|..|..+++|++|+|++|
T Consensus 12 ~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 34455555554 4444432 44555555555555444444555555555555555555333333445555555555555
Q ss_pred cCcccCCccccCccccceeeccCCcCC
Q 002069 83 LLSGSIPNEVGSLKSLSDLRLSNNSLN 109 (973)
Q Consensus 83 ~l~~~~p~~~~~l~~L~~L~L~~n~l~ 109 (973)
++++..|..|..+++|++|+|++|.+.
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~ 115 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWD 115 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCC
Confidence 554333333445555555555555444
No 399
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.45 E-value=3.1e-13 Score=132.63 Aligned_cols=104 Identities=23% Similarity=0.239 Sum_probs=53.5
Q ss_pred CeeeccCCcCCCCCCCcccCCCCCcEEEccCCcCcccCCccccCccccceeeccCCcCCCCCCCccccCCccceeecccc
Q 002069 51 NGLSLYSNFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSLSDLRLSNNSLNGSIPSSLGNLTNLVTLYLHMN 130 (973)
Q Consensus 51 ~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 130 (973)
+.+++++|+++ .+|..+. ++|++|+|++|++++..|..|+.+++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 44555555554 4554443 45555555555555444455555555555555555555333333455555555555555
Q ss_pred cccccCcccccccCCCCceecccCCCC
Q 002069 131 ALSGSIPDEIGNLKFLSDLQVSYNTLS 157 (973)
Q Consensus 131 ~l~~~~p~~~~~l~~L~~L~l~~N~l~ 157 (973)
+|++..+..|.++++|++|+|++|.+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc
Confidence 555333333555555555555555554
No 400
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.44 E-value=1.8e-12 Score=145.80 Aligned_cols=131 Identities=12% Similarity=0.115 Sum_probs=53.9
Q ss_pred hhhhccccccceEEcccccccCCcCchhhcCCccceeeccccccCCCCCccccCCCCCCcEEcCCCCCCCcchhccCCCC
Q 002069 281 LEEIGNLKSLLHLQLNYNTLSGSIPLSLGSLTNLATLYFSTNALSGSIPNEITNLRSLSDLQLSENTLNGSIPLALGNLT 360 (973)
Q Consensus 281 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 360 (973)
..+|.++.+|+.+.+..+..+ .....|.++++|+.+.+. +.++.+...+|.++.+|+.++|.++ ++.+...+|.++.
T Consensus 258 ~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~ 334 (394)
T 4gt6_A 258 THAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCE 334 (394)
T ss_dssp TTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCT
T ss_pred cceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCC
Confidence 344445555555555433322 334444445555555543 2233333444445555555555432 3333344444555
Q ss_pred CCcEEEccCCcccCCCCcccccccccchhcccccccccCCCcccCCCCCCCEEEccCC
Q 002069 361 KLVSLDLSINKLSGSIPLSFASLTSLTTLYLYENSLCDSIPKEIGDMKSLSILDLSSN 418 (973)
Q Consensus 361 ~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 418 (973)
+|+.+.+..+ ++.+...+|.+|++|+.+++.++.... .++....+|+.+.+..|
T Consensus 335 ~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~ 388 (394)
T 4gt6_A 335 QLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPG 388 (394)
T ss_dssp TCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC--------
T ss_pred CCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCC
Confidence 5555554322 333444444444444444444443211 23333444444444433
No 401
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.43 E-value=1.2e-12 Score=147.40 Aligned_cols=316 Identities=9% Similarity=0.081 Sum_probs=138.4
Q ss_pred ccccccC-ccceeeccccccccccccccCCCCcccEEecCCcc---cCCCCCccccccccccceecccccccCCCCcccC
Q 002069 186 NEIGNLK-SLSDLRLDYNTLSGSILYSFGNLTKLEILYLDVNA---LSGLIPNEIGNLKSLLALQLNYNTLSGSIPCSFG 261 (973)
Q Consensus 186 ~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~---i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 261 (973)
.+|.+++ .|+.+.+..+ ++.+...+|.++++|+.+.+..|. ++.+...+|.++.+|+.+.+..+
T Consensus 57 ~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~----------- 124 (394)
T 4gt6_A 57 RVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS----------- 124 (394)
T ss_dssp TTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-----------
T ss_pred hhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-----------
Confidence 3444442 3555555432 444555555555555555555442 33333444444444444443322
Q ss_pred CcchhhhccCCCcccCchhhhhhccccccceEEcccccccCCcCchhhcCCccceeeccccccCCCCCccccCCCCCCcE
Q 002069 262 NLTKLVISCLGTNALSSSILEEIGNLKSLLHLQLNYNTLSGSIPLSLGSLTNLATLYFSTNALSGSIPNEITNLRSLSDL 341 (973)
Q Consensus 262 ~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 341 (973)
++.+....|.++.+|+.+.+..+ +.......|..+..|+.+.+..+ ++.+...+|.+ ..|+.+
T Consensus 125 --------------~~~I~~~aF~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i 187 (394)
T 4gt6_A 125 --------------VTEIDSEAFHHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQI 187 (394)
T ss_dssp --------------CSEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEE
T ss_pred --------------cceehhhhhhhhcccccccccce-eeeecccceecccccccccccce-eeEeccccccc-cceeEE
Confidence 33344455556666666666533 23244555666666666666543 33234444443 456666
Q ss_pred EcCCCCCCCcchhccCCCCCCcEEEccCCcccCCCCccccc-------------ccccchhcccccccccCCCcccCCCC
Q 002069 342 QLSENTLNGSIPLALGNLTKLVSLDLSINKLSGSIPLSFAS-------------LTSLTTLYLYENSLCDSIPKEIGDMK 408 (973)
Q Consensus 342 ~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~-------------l~~L~~L~L~~N~l~~~~~~~~~~l~ 408 (973)
.+..+-.. ....+|.++.++.......+.........+.. ...+..+.+. +.++.....+|.++.
T Consensus 188 ~ip~~~~~-i~~~af~~c~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip-~~v~~i~~~aF~~c~ 265 (394)
T 4gt6_A 188 HIPAKVTR-IGTNAFSECFALSTITSDSESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIP-NGVARIETHAFDSCA 265 (394)
T ss_dssp EECTTCCE-ECTTTTTTCTTCCEEEECCSSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECC-TTEEEECTTTTTTCS
T ss_pred EECCcccc-cccchhhhccccceecccccccccccceeecccccccccccccccccccceEEcC-CcceEcccceeeecc
Confidence 66544322 44455666666666665554433211111111 1111111111 122233344555555
Q ss_pred CCCEEEccCCCCCCCcchhhhhhcccceEEEeeCcccccccCCCCCCCcccceeeccCCccCCCCCcccccccccccccc
Q 002069 409 SLSILDLSSNKLNGSIPLSLANLTNSLKVLYLSSNHIVGEIPLGHGKFSSLIQLILNNNELSGQLSPELGSLNQLEYLDL 488 (973)
Q Consensus 409 ~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~l~~l~~L~~L~L 488 (973)
+|+.+.+.++..+ ....+|..+++|+.+.+. +.++.+...+|..+.+|+.+++
T Consensus 266 ~L~~i~lp~~~~~--------------------------I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~l 318 (394)
T 4gt6_A 266 YLASVKMPDSVVS--------------------------IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDI 318 (394)
T ss_dssp SCCEEECCTTCCE--------------------------ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEEC
T ss_pred cccEEecccccce--------------------------ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEe
Confidence 5555555443321 222333333444444442 2232233344444445555554
Q ss_pred cccccccccCccccccccccEEeecCccCCCCCCcccccccccCeecccccccCCCcchhhccccccccccccccc
Q 002069 489 SANTFHNSIPESLGNLVKLHYLNLSNNQFSQKIPNPIEKLIHLSELDLSYKIFGEEIPSQVCSMQSLEKLNLSHNN 564 (973)
Q Consensus 489 s~N~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n~i~~~~~~~~~~l~~L~~L~L~~N~ 564 (973)
..+ ++.....+|.++.+|+.+.+..+ ++.....+|.++.+|+.++++++... ...+..+.+|+.+.+..|.
T Consensus 319 p~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~---~~~~~~~~~L~~i~i~~~~ 389 (394)
T 4gt6_A 319 PEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQ---WNAISTDSGLQNLPVAPGS 389 (394)
T ss_dssp CTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHH---HHTCBCCCCC---------
T ss_pred CCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceee---hhhhhccCCCCEEEeCCCC
Confidence 433 33333344555555555555432 44444445555555555555544321 1234445556666655543
No 402
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.43 E-value=8.5e-16 Score=170.42 Aligned_cols=97 Identities=23% Similarity=0.312 Sum_probs=56.3
Q ss_pred ccccccccccccccccc----cCccccccccccEEeecCccCCCCC----CcccccccccCeecccccccCCCcchhhc-
Q 002069 480 LNQLEYLDLSANTFHNS----IPESLGNLVKLHYLNLSNNQFSQKI----PNPIEKLIHLSELDLSYKIFGEEIPSQVC- 550 (973)
Q Consensus 480 l~~L~~L~Ls~N~i~~~----~~~~l~~l~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~L~ls~n~i~~~~~~~~~- 550 (973)
.++|++|+|++|.|++. ++..+..+++|++|+|++|+|++.. +..+....+|++|+|++|.|++.+...+.
T Consensus 154 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~ 233 (372)
T 3un9_A 154 QCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALAR 233 (372)
T ss_dssp TCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHH
T ss_pred CCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHH
Confidence 34566666666666532 2233344556666666666665432 33445556666666666666654443333
Q ss_pred ---ccccccccccccccccCccchhhhcc
Q 002069 551 ---SMQSLEKLNLSHNNLSGSISRCFEEM 576 (973)
Q Consensus 551 ---~l~~L~~L~L~~N~l~~~~~~~~~~l 576 (973)
.++.|++|+|++|+|+..+...+..+
T Consensus 234 ~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~ 262 (372)
T 3un9_A 234 AAREHPSLELLHLYFNELSSEGRQVLRDL 262 (372)
T ss_dssp HHHHCSSCCEEECTTSSCCHHHHHHHHHC
T ss_pred HHHhCCCCCEEeccCCCCCHHHHHHHHHH
Confidence 45677777777777776666666554
No 403
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.42 E-value=4.1e-15 Score=164.86 Aligned_cols=112 Identities=21% Similarity=0.249 Sum_probs=65.5
Q ss_pred ccccccccccccccccccCcccc-----ccccccEEeecCccCCCCCC----cccccccccCeecccccccCCCc----c
Q 002069 480 LNQLEYLDLSANTFHNSIPESLG-----NLVKLHYLNLSNNQFSQKIP----NPIEKLIHLSELDLSYKIFGEEI----P 546 (973)
Q Consensus 480 l~~L~~L~Ls~N~i~~~~~~~l~-----~l~~L~~L~L~~N~l~~~~~----~~~~~l~~L~~L~ls~n~i~~~~----~ 546 (973)
+++|++|+|++|.|++.....+. ..++|++|+|++|.|+.... ..+..+++|++|||++|.|++.+ +
T Consensus 125 L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~ 204 (372)
T 3un9_A 125 FLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLA 204 (372)
T ss_dssp HHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHH
T ss_pred HHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHH
Confidence 34566666666666544333332 24567777777777654322 33355666777777777776554 2
Q ss_pred hhhcccccccccccccccccCccc----hhhhccccccEEeCcCCCCCC
Q 002069 547 SQVCSMQSLEKLNLSHNNLSGSIS----RCFEEMHWLSCIDISYNALQG 591 (973)
Q Consensus 547 ~~~~~l~~L~~L~L~~N~l~~~~~----~~~~~l~~L~~l~l~~N~l~~ 591 (973)
..+..++.|++|+|++|.|+..+. .++...+.|++||+++|+++.
T Consensus 205 ~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 205 AQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp HHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCH
T ss_pred HHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCH
Confidence 334455667777777777765433 333345667777777776653
No 404
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.25 E-value=1.2e-11 Score=136.57 Aligned_cols=103 Identities=24% Similarity=0.207 Sum_probs=60.9
Q ss_pred EEECCCC-cccccCCcCccCCCCCCeeeccC-CcCCCCCCCcccCCCCCcEEEccCCcCcccCCccccCccccceeeccC
Q 002069 28 LLSFSKN-QLSGLIPHEIGRLSSLNGLSLYS-NFLKGSIPPSLGNLTSLIYIDIGNNLLSGSIPNEVGSLKSLSDLRLSN 105 (973)
Q Consensus 28 ~L~l~~n-~l~~~~p~~~~~l~~L~~L~l~~-n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~ 105 (973)
.++++++ +++ .+|. |+.+++|++|+|++ |++.+..|..|++|++|++|+|++|+|++..|..|+.|++|++|+|++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4466665 565 3455 66666666666664 666644445566666666666666666655555666666666666666
Q ss_pred CcCCCCCCCccccCCccceeeccccccc
Q 002069 106 NSLNGSIPSSLGNLTNLVTLYLHMNALS 133 (973)
Q Consensus 106 n~l~~~~p~~~~~l~~L~~L~L~~n~l~ 133 (973)
|+|++..|..|..++ |++|+|.+|.+.
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 666643333343333 666666666665
No 405
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.24 E-value=1.4e-11 Score=136.08 Aligned_cols=104 Identities=21% Similarity=0.217 Sum_probs=92.9
Q ss_pred EEeCCCC-CCCCCCCcccCCCCCCCEEECCC-CcccccCCcCccCCCCCCeeeccCCcCCCCCCCcccCCCCCcEEEccC
Q 002069 4 VLGLSFN-QFSGSIPPEIGHLTHLKLLSFSK-NQLSGLIPHEIGRLSSLNGLSLYSNFLKGSIPPSLGNLTSLIYIDIGN 81 (973)
Q Consensus 4 ~L~l~~~-~l~~~~p~~~~~l~~L~~L~l~~-n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~ 81 (973)
.++++++ +|+ .+|+ |..+++|++|+|++ |+|++..|..|+.|++|++|+|++|+|++..|..|++|++|++|+|++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 5789998 898 7999 99999999999996 999988778999999999999999999988888999999999999999
Q ss_pred CcCcccCCccccCccccceeeccCCcCCC
Q 002069 82 NLLSGSIPNEVGSLKSLSDLRLSNNSLNG 110 (973)
Q Consensus 82 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~ 110 (973)
|+|++..|..+..+. |++|+|++|.+..
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 999954444555555 9999999999973
No 406
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.23 E-value=1.8e-10 Score=128.83 Aligned_cols=150 Identities=16% Similarity=0.137 Sum_probs=88.5
Q ss_pred ccccccCCCCcccEEecCCcccCCCCCccccccccccceecccccccCCCCcccCCcchhhhccCCCcccCchhhhhhcc
Q 002069 207 SILYSFGNLTKLEILYLDVNALSGLIPNEIGNLKSLLALQLNYNTLSGSIPCSFGNLTKLVISCLGTNALSSSILEEIGN 286 (973)
Q Consensus 207 ~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~l~l~~n~i~~~~~~~~~~ 286 (973)
+....|..+.+|+.+.+..+ +..+...+|.+..+|+.+.+..+ ++.+....|.+
T Consensus 208 i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-------------------------v~~I~~~aF~~ 261 (379)
T 4h09_A 208 VTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-------------------------VTSIGSFLLQN 261 (379)
T ss_dssp ECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-------------------------CCEECTTTTTT
T ss_pred Eeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-------------------------ccEeCccccce
Confidence 33444555555555555433 23333445555555555554433 33344455566
Q ss_pred ccccceEEcccccccCCcCchhhcCCccceeeccccccCCCCCccccCCCCCCcEEcCCCCCCCcchhccCCCCCCcEEE
Q 002069 287 LKSLLHLQLNYNTLSGSIPLSLGSLTNLATLYFSTNALSGSIPNEITNLRSLSDLQLSENTLNGSIPLALGNLTKLVSLD 366 (973)
Q Consensus 287 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 366 (973)
+.+|+.+.+..+ ++......|.++++|+.+.+.++.++.+...+|.++.+|+.+.|.++ ++.+...+|.++++|+.+.
T Consensus 262 ~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ 339 (379)
T 4h09_A 262 CTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTIS 339 (379)
T ss_dssp CTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCC
T ss_pred eehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEE
Confidence 666666666543 44455556777777777777766666566667777777777777544 5545566777777777777
Q ss_pred ccCCcccCCCCcccccccc
Q 002069 367 LSINKLSGSIPLSFASLTS 385 (973)
Q Consensus 367 Ls~N~i~~~~~~~~~~l~~ 385 (973)
+..+ ++.+...+|.++..
T Consensus 340 ip~~-v~~I~~~aF~~c~~ 357 (379)
T 4h09_A 340 YPKS-ITLIESGAFEGSSI 357 (379)
T ss_dssp CCTT-CCEECTTTTTTSSC
T ss_pred ECCc-cCEEchhHhhCCCC
Confidence 7554 55566667766643
No 407
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.20 E-value=2.9e-10 Score=127.14 Aligned_cols=131 Identities=13% Similarity=0.104 Sum_probs=62.3
Q ss_pred hhccccccceEEcccccccCCcCchhhcCCccceeeccccccCCCCCccccCCCCCCcEEcCCCCCCCcchhccCCCCCC
Q 002069 283 EIGNLKSLLHLQLNYNTLSGSIPLSLGSLTNLATLYFSTNALSGSIPNEITNLRSLSDLQLSENTLNGSIPLALGNLTKL 362 (973)
Q Consensus 283 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 362 (973)
.+..+.+|+.+.+..+ ++......|..+..|+.+.+..+ ++.+...+|.++.+|+.+.+..+ ++.+...+|.++++|
T Consensus 212 ~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L 288 (379)
T 4h09_A 212 GFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNL 288 (379)
T ss_dssp TTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTC
T ss_pred ccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccccc
Confidence 3444444444444332 22233444445555555555433 33334444555555555555332 333334445555555
Q ss_pred cEEEccCCcccCCCCcccccccccchhcccccccccCCCcccCCCCCCCEEEccC
Q 002069 363 VSLDLSINKLSGSIPLSFASLTSLTTLYLYENSLCDSIPKEIGDMKSLSILDLSS 417 (973)
Q Consensus 363 ~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 417 (973)
+.+++.++.++.+...+|.++.+|+.+.|..+ ++.+...+|.++++|+.+.+..
T Consensus 289 ~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~ 342 (379)
T 4h09_A 289 TKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPK 342 (379)
T ss_dssp CEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCT
T ss_pred ccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECC
Confidence 55555555555444555555555555555432 4444445555555555555543
No 408
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.16 E-value=7.3e-11 Score=124.71 Aligned_cols=146 Identities=14% Similarity=0.070 Sum_probs=113.0
Q ss_pred HHHhcCCcccccccCCCceeEEEEEcCCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCC-CCceeeeceeeecccee
Q 002069 697 IRATKNFDDEHCIGNGGQGSVYKAELPTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIR-HRNIVKFYGFCSHALHS 775 (973)
Q Consensus 697 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~ 775 (973)
......|++....+.|+++.||++.. .++.+++|+........ ...+.+|+.+++.+. +..++++++++...+..
T Consensus 10 ~~~l~~~~~~~~~~g~s~~~v~~~~~-~~~~~vlK~~~~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~ 85 (263)
T 3tm0_A 10 KKLIEKYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGT---TYDVEREKDMMLWLEGKLPVPKVLHFERHDGWS 85 (263)
T ss_dssp HHHHTTSEEEECCSCCSSSEEEEEEC-SSCEEEEEEECGGGTTS---TTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEE
T ss_pred HHHhccceeEeeccCCCCCeEEEEEC-CCCcEEEEeCCcccCCC---HHHHHHHHHHHHHHhcCCCCCeEEEEEecCCce
Confidence 34456798889999999999999986 46899999986421111 235778888888874 67788999999888889
Q ss_pred EEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCC--------------------------------
Q 002069 776 FVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNC-------------------------------- 823 (973)
Q Consensus 776 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~-------------------------------- 823 (973)
|+||||++|.++.+.+.. ..+...++.+++++++.||+..
T Consensus 86 ~lv~e~i~G~~l~~~~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (263)
T 3tm0_A 86 NLLMSEADGVLCSEEYED--------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCEN 157 (263)
T ss_dssp EEEEECCSSEEHHHHCCT--------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGG
T ss_pred EEEEEecCCeehhhccCC--------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccc
Confidence 999999999999876321 1223478889999999999821
Q ss_pred ------------------------CCCeEeecCCCCCeeecCCCceEEecccccc
Q 002069 824 ------------------------FPPIVHRDISSKNVLLNLEYEAHVSDFGISK 854 (973)
Q Consensus 824 ------------------------~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~ 854 (973)
.+.++|||++|.||+++.++.+.|+||+.+.
T Consensus 158 ~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 158 WEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp GSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred ccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 0358999999999999876566799999775
No 409
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.00 E-value=3e-10 Score=119.94 Aligned_cols=137 Identities=15% Similarity=0.110 Sum_probs=99.9
Q ss_pred cCCcccccccCCCceeEEEEEcCCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCc--eeeeceeeeccceeEEE
Q 002069 701 KNFDDEHCIGNGGQGSVYKAELPTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRN--IVKFYGFCSHALHSFVV 778 (973)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~~~~~~~~~~~lv 778 (973)
..|.+....+.|..+.||++...+|+.|++|+..... ...+..|+.+++.+.+.+ ++++++++..++..++|
T Consensus 20 ~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~------~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v 93 (264)
T 1nd4_A 20 FGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA------LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLL 93 (264)
T ss_dssp TTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSCT------TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEE
T ss_pred CCCceEecccCCCCceEEEEecCCCCeEEEEeCCccc------chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEE
Confidence 4455544444566699999988778889999976431 245667888888775434 56688888877788999
Q ss_pred EEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCC-----------------------------------
Q 002069 779 YEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNC----------------------------------- 823 (973)
Q Consensus 779 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~----------------------------------- 823 (973)
|||++|.++. ... .. ...++.+++..++.||+..
T Consensus 94 ~e~i~G~~l~--~~~------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (264)
T 1nd4_A 94 LGEVPGQDLL--SSH------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEH 162 (264)
T ss_dssp EECCSSEETT--TSC------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGG
T ss_pred EEecCCcccC--cCc------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhc
Confidence 9999998884 211 11 2356778888888888752
Q ss_pred --------------------CCCeEeecCCCCCeeecCCCceEEecccccc
Q 002069 824 --------------------FPPIVHRDISSKNVLLNLEYEAHVSDFGISK 854 (973)
Q Consensus 824 --------------------~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~ 854 (973)
...++|||++|.||+++.++.+.++|||.+.
T Consensus 163 ~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 163 QGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp TTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred cCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 0129999999999999877667799999875
No 410
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.97 E-value=1.7e-10 Score=126.54 Aligned_cols=151 Identities=17% Similarity=0.214 Sum_probs=94.7
Q ss_pred ccceEEEeeCcccccccCCCCCCCcccceeeccCCccCCCCCcccc--cccccccccccc--cccccc-----cCccc--
Q 002069 433 NSLKVLYLSSNHIVGEIPLGHGKFSSLIQLILNNNELSGQLSPELG--SLNQLEYLDLSA--NTFHNS-----IPESL-- 501 (973)
Q Consensus 433 ~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~l~~N~l~~~~~~~l~--~l~~L~~L~Ls~--N~i~~~-----~~~~l-- 501 (973)
++|+.|+|++|.-. ..+. + ..++|++|++..|.++......+. .+++|++|+|+. |...+. +...+
T Consensus 172 P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~ 248 (362)
T 2ra8_A 172 PLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSK 248 (362)
T ss_dssp TTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCT
T ss_pred CCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhc
Confidence 35666666665211 1111 2 256677777766666533223333 567777777653 221111 11122
Q ss_pred cccccccEEeecCccCCCCCCcccc---cccccCeecccccccCCCcchhh----cccccccccccccccccCccchhhh
Q 002069 502 GNLVKLHYLNLSNNQFSQKIPNPIE---KLIHLSELDLSYKIFGEEIPSQV----CSMQSLEKLNLSHNNLSGSISRCFE 574 (973)
Q Consensus 502 ~~l~~L~~L~L~~N~l~~~~~~~~~---~l~~L~~L~ls~n~i~~~~~~~~----~~l~~L~~L~L~~N~l~~~~~~~~~ 574 (973)
..+++|++|+|++|.+++..+..+. .+++|++|+|++|.|++.++..+ ..+++|+.|+|++|.|+.....++.
T Consensus 249 ~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~ 328 (362)
T 2ra8_A 249 DRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQ 328 (362)
T ss_dssp TTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHH
T ss_pred CCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHH
Confidence 2467899999999888765444443 47789999999999887765544 3468899999999999877777766
Q ss_pred c-cccccEEeCcCCC
Q 002069 575 E-MHWLSCIDISYNA 588 (973)
Q Consensus 575 ~-l~~L~~l~l~~N~ 588 (973)
. + ...++++.|+
T Consensus 329 ~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 329 KSL--PMKIDVSDSQ 341 (362)
T ss_dssp HHC--CSEEECCSBC
T ss_pred HHc--CCEEEecCCc
Confidence 5 3 4568888887
No 411
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.93 E-value=2.1e-10 Score=125.79 Aligned_cols=84 Identities=17% Similarity=0.329 Sum_probs=48.1
Q ss_pred ccccccccccccccccccCcccc---ccccccEEeecCccCCCCCC----cccccccccCeecccccccCCCcchhhccc
Q 002069 480 LNQLEYLDLSANTFHNSIPESLG---NLVKLHYLNLSNNQFSQKIP----NPIEKLIHLSELDLSYKIFGEEIPSQVCSM 552 (973)
Q Consensus 480 l~~L~~L~Ls~N~i~~~~~~~l~---~l~~L~~L~L~~N~l~~~~~----~~~~~l~~L~~L~ls~n~i~~~~~~~~~~l 552 (973)
+++|++|+|++|.+++..+..+. .+++|++|+|+.|.+++..+ ..+..+++|+.|++++|.|++.+...+...
T Consensus 251 ~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~a 330 (362)
T 2ra8_A 251 FPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKS 330 (362)
T ss_dssp CTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHH
T ss_pred CCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHH
Confidence 45666666666666543333332 35667777777777665432 233456677777777777766555555431
Q ss_pred cccccccccccc
Q 002069 553 QSLEKLNLSHNN 564 (973)
Q Consensus 553 ~~L~~L~L~~N~ 564 (973)
- ...+++++|+
T Consensus 331 l-g~~~~~~~~~ 341 (362)
T 2ra8_A 331 L-PMKIDVSDSQ 341 (362)
T ss_dssp C-CSEEECCSBC
T ss_pred c-CCEEEecCCc
Confidence 1 3446777766
No 412
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.92 E-value=2.6e-09 Score=118.31 Aligned_cols=144 Identities=16% Similarity=0.225 Sum_probs=106.8
Q ss_pred cccccccCCCceeEEEEEcCCCCEEEEEEcC--CCCCcchhhHHHHHHHHHHhhcCC--CCceeeeceeeecc---ceeE
Q 002069 704 DDEHCIGNGGQGSVYKAELPTGEIVAVKKFH--SPLPGEMACQQEFLNEGNALTKIR--HRNIVKFYGFCSHA---LHSF 776 (973)
Q Consensus 704 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~--~~~~~~~~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~---~~~~ 776 (973)
...+.++.|.++.||++... +..+++|+.. .... ......+.+|..+++.+. +..+++++.++.+. +..|
T Consensus 41 ~~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~--~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~ 117 (359)
T 3dxp_A 41 LSVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKL--LPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAF 117 (359)
T ss_dssp CEEEECCC-CCSCEEEEECS-SCEEEEECCCC------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCE
T ss_pred ceEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCC--CCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeE
Confidence 34677999999999999875 4688889876 3211 112356778999888886 45678888888766 4589
Q ss_pred EEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCC---------------------------------
Q 002069 777 VVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNC--------------------------------- 823 (973)
Q Consensus 777 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~--------------------------------- 823 (973)
+||||++|..+.+.. ...++..++..++.+++++++.||+..
T Consensus 118 ~vme~v~G~~l~~~~-----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (359)
T 3dxp_A 118 YIMEFVSGRVLWDQS-----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETE 192 (359)
T ss_dssp EEEECCCCBCCCCTT-----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCS
T ss_pred EEEEecCCeecCCCc-----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCc
Confidence 999999988774311 124677888999999999999999831
Q ss_pred ----------------------CCCeEeecCCCCCeeecCCCc--eEEeccccccc
Q 002069 824 ----------------------FPPIVHRDISSKNVLLNLEYE--AHVSDFGISKF 855 (973)
Q Consensus 824 ----------------------~~~i~H~Dlk~~Nill~~~~~--~kl~Dfg~a~~ 855 (973)
.+.++|||+++.||+++.++. +.++||+.+..
T Consensus 193 ~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 193 SIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp CCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred CChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 136899999999999997753 68999998864
No 413
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.79 E-value=1.9e-09 Score=116.30 Aligned_cols=186 Identities=18% Similarity=0.156 Sum_probs=122.8
Q ss_pred cccccCCCceeEEEEEcCCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcC-CCCc--eeeeceeeeccc---eeEEEE
Q 002069 706 EHCIGNGGQGSVYKAELPTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKI-RHRN--IVKFYGFCSHAL---HSFVVY 779 (973)
Q Consensus 706 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~n--iv~~~~~~~~~~---~~~lv~ 779 (973)
.+.++.|.+..||++. +.+++|+.... .....+.+|..+++.+ .+.. +++++.+..... ..|+||
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~-----~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm 95 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS-----RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGF 95 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH-----HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEE
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc-----chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEE
Confidence 4568999999999874 46888986421 2356788999998877 3332 445555544333 358999
Q ss_pred EecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCC------------------------------------
Q 002069 780 EYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNC------------------------------------ 823 (973)
Q Consensus 780 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~------------------------------------ 823 (973)
||++|.++.+... ..++..++..++.+++..++.||+..
T Consensus 96 ~~i~G~~l~~~~~-----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (304)
T 3sg8_A 96 TKIKGVPLTPLLL-----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQM 170 (304)
T ss_dssp ECCCCEECCHHHH-----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHH
T ss_pred cccCCeECCcccc-----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccH
Confidence 9999988864321 24567788888889999888888621
Q ss_pred -------------------CCCeEeecCCCCCeeecC--CCceEEecccccccccCCCCcccc--c---cc---------
Q 002069 824 -------------------FPPIVHRDISSKNVLLNL--EYEAHVSDFGISKFLKLGLSNRTE--L---AG--------- 868 (973)
Q Consensus 824 -------------------~~~i~H~Dlk~~Nill~~--~~~~kl~Dfg~a~~~~~~~~~~~~--~---~g--------- 868 (973)
.+.++|+|++|.||+++. +..+.++||+.+..-.+...-... . .+
T Consensus 171 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~ 250 (304)
T 3sg8_A 171 KKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILN 250 (304)
T ss_dssp HHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHH
Confidence 135799999999999998 456789999998754321100000 0 00
Q ss_pred ccCccc-ccccccCCCCCccchHHHHHHHHHHHhCCCCCc
Q 002069 869 TFGYIA-PELAYTMKVTEKCDVYSFGVLALEVIKGKHPRD 907 (973)
Q Consensus 869 ~~~y~a-PE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~ 907 (973)
..+... |+.... .....+.|++|.++|++.+|+.+|-
T Consensus 251 ~Y~~~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 251 HYKHKDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp HHTCSCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HcCCCCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 001111 221111 1123689999999999999998864
No 414
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.67 E-value=2.2e-09 Score=106.24 Aligned_cols=91 Identities=18% Similarity=0.181 Sum_probs=40.2
Q ss_pred CCCcccceeeccCC-ccCCC----CCccccccccccccccccccccccc----CccccccccccEEeecCccCCCCC---
Q 002069 454 GKFSSLIQLILNNN-ELSGQ----LSPELGSLNQLEYLDLSANTFHNSI----PESLGNLVKLHYLNLSNNQFSQKI--- 521 (973)
Q Consensus 454 ~~~~~L~~L~l~~N-~l~~~----~~~~l~~l~~L~~L~Ls~N~i~~~~----~~~l~~l~~L~~L~L~~N~l~~~~--- 521 (973)
...++|++|+|++| .|++. +...+...++|++|+|++|.|++.. .+.+...+.|++|+|++|.|++..
T Consensus 33 ~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~ 112 (185)
T 1io0_A 33 NNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILA 112 (185)
T ss_dssp TTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHH
T ss_pred hcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHH
Confidence 33445555555555 55431 2233333445555555555554322 222223344555555555554322
Q ss_pred -CcccccccccCeecc--cccccCCC
Q 002069 522 -PNPIEKLIHLSELDL--SYKIFGEE 544 (973)
Q Consensus 522 -~~~~~~l~~L~~L~l--s~n~i~~~ 544 (973)
...+.....|++|+| ++|.|++.
T Consensus 113 l~~~L~~n~~L~~L~L~~~~N~i~~~ 138 (185)
T 1io0_A 113 LVEALQSNTSLIELRIDNQSQPLGNN 138 (185)
T ss_dssp HHHGGGGCSSCCEEECCCCSSCCCHH
T ss_pred HHHHHHhCCCceEEEecCCCCCCCHH
Confidence 223333344444444 44444443
No 415
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.63 E-value=1.8e-09 Score=106.73 Aligned_cols=115 Identities=12% Similarity=0.102 Sum_probs=62.1
Q ss_pred ccccccccccccccccc-ccccc----cCccccccccccEEeecCccCCCCCC----cccccccccCeecccccccCCCc
Q 002069 475 PELGSLNQLEYLDLSAN-TFHNS----IPESLGNLVKLHYLNLSNNQFSQKIP----NPIEKLIHLSELDLSYKIFGEEI 545 (973)
Q Consensus 475 ~~l~~l~~L~~L~Ls~N-~i~~~----~~~~l~~l~~L~~L~L~~N~l~~~~~----~~~~~l~~L~~L~ls~n~i~~~~ 545 (973)
..+...++|++|+|++| .|++. +.+.+...++|++|+|++|+|+.... ..+.....|++|+|++|.|++.+
T Consensus 30 ~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g 109 (185)
T 1io0_A 30 RIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSG 109 (185)
T ss_dssp HHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHH
T ss_pred HHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHH
Confidence 34445566666666666 66532 22333444566666666666654332 23344456666666666666554
Q ss_pred chh----hccccccccccc--ccccccCccc----hhhhccccccEEeCcCCCC
Q 002069 546 PSQ----VCSMQSLEKLNL--SHNNLSGSIS----RCFEEMHWLSCIDISYNAL 589 (973)
Q Consensus 546 ~~~----~~~l~~L~~L~L--~~N~l~~~~~----~~~~~l~~L~~l~l~~N~l 589 (973)
... +...+.|++|+| ++|.|...+. .++...+.|++|++++|.+
T Consensus 110 ~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i 163 (185)
T 1io0_A 110 ILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 163 (185)
T ss_dssp HHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred HHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCC
Confidence 332 333455666666 5566654432 2333345666666666655
No 416
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.54 E-value=3.7e-07 Score=99.02 Aligned_cols=138 Identities=15% Similarity=0.139 Sum_probs=101.9
Q ss_pred CCcccccccCCCceeEEEEEcCCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCC----CceeeeceeeeccceeEE
Q 002069 702 NFDDEHCIGNGGQGSVYKAELPTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRH----RNIVKFYGFCSHALHSFV 777 (973)
Q Consensus 702 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h----~niv~~~~~~~~~~~~~l 777 (973)
.+...+.++.|....||++ ++.+++|+... ......+..|..++..+.+ ..+++++++ +..++
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~-----~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~l 104 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKR-----DSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFN 104 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESS-----HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCc-----HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEE
Confidence 5667788999999999998 66788898642 1223568889988887755 234455554 46789
Q ss_pred EEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCC---------------------------------
Q 002069 778 VYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCF--------------------------------- 824 (973)
Q Consensus 778 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~--------------------------------- 824 (973)
||||++|.++.+... ..++..+...++.+++..++.||+...
T Consensus 105 vme~i~G~~l~~~~~-----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (320)
T 3r70_A 105 IMKYIKGERITYEQY-----HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQ 179 (320)
T ss_dssp EEECCCCBCCCHHHH-----TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTT
T ss_pred EEeecCCcccccccc-----ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcc
Confidence 999999998863321 234666777888888888888885422
Q ss_pred ---------------------------CCeEeecCCCCCeeecCCCceEEeccccccccc
Q 002069 825 ---------------------------PPIVHRDISSKNVLLNLEYEAHVSDFGISKFLK 857 (973)
Q Consensus 825 ---------------------------~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~ 857 (973)
+.++|+|++|.||+++.++.+.++||+.+..-.
T Consensus 180 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~~ 239 (320)
T 3r70_A 180 LLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGD 239 (320)
T ss_dssp CCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEEC
T ss_pred cccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccCC
Confidence 235999999999999986667999999986543
No 417
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.37 E-value=3.6e-08 Score=102.13 Aligned_cols=80 Identities=26% Similarity=0.349 Sum_probs=50.0
Q ss_pred cCCCCCcEEEccCCcCcc--cCCccccCccccceeeccCCcCCCCCCCccccCC--ccceeecccccccccCcc------
Q 002069 69 GNLTSLIYIDIGNNLLSG--SIPNEVGSLKSLSDLRLSNNSLNGSIPSSLGNLT--NLVTLYLHMNALSGSIPD------ 138 (973)
Q Consensus 69 ~~l~~L~~L~l~~n~l~~--~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~--~L~~L~L~~n~l~~~~p~------ 138 (973)
.++++|++|+|++|++++ .+|..+..+++|++|+|++|+|++. ..+..++ +|++|+|++|.+.+..|+
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 346667777777777664 3345555667777777777777632 3344444 677777777777654442
Q ss_pred -cccccCCCCcee
Q 002069 139 -EIGNLKFLSDLQ 150 (973)
Q Consensus 139 -~~~~l~~L~~L~ 150 (973)
.+..+++|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 356677777776
No 418
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.36 E-value=1.1e-07 Score=98.49 Aligned_cols=106 Identities=26% Similarity=0.250 Sum_probs=68.0
Q ss_pred ccccccccc--cccccccccc---ccCccccccccccEEeecCccCCC--CCCcccccccccCeecccccccCCCcchhh
Q 002069 477 LGSLNQLEY--LDLSANTFHN---SIPESLGNLVKLHYLNLSNNQFSQ--KIPNPIEKLIHLSELDLSYKIFGEEIPSQV 549 (973)
Q Consensus 477 l~~l~~L~~--L~Ls~N~i~~---~~~~~l~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~ls~n~i~~~~~~~~ 549 (973)
|...+.|+. ++++.|.... .......++++|+.|+|++|+|++ .++..+..+++|+.|+|++|.|++. ..+
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l 214 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--REL 214 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGG
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhh
Confidence 444555665 6677775431 111112356778888888888876 3445666777888888888877765 223
Q ss_pred cccc--cccccccccccccCccc-------hhhhccccccEEeC
Q 002069 550 CSMQ--SLEKLNLSHNNLSGSIS-------RCFEEMHWLSCIDI 584 (973)
Q Consensus 550 ~~l~--~L~~L~L~~N~l~~~~~-------~~~~~l~~L~~l~l 584 (973)
..+. +|++|+|++|++++..+ ..+..+++|+.||-
T Consensus 215 ~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LDg 258 (267)
T 3rw6_A 215 DKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLDG 258 (267)
T ss_dssp GGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEESS
T ss_pred hhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeECC
Confidence 3333 78888888888876433 34667888888763
No 419
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.32 E-value=2.3e-06 Score=90.40 Aligned_cols=135 Identities=13% Similarity=0.102 Sum_probs=98.3
Q ss_pred ccccCCCce-eEEEEEcC-CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCC-CCceeeeceeeeccceeEEEEEecC
Q 002069 707 HCIGNGGQG-SVYKAELP-TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIR-HRNIVKFYGFCSHALHSFVVYEYLE 783 (973)
Q Consensus 707 ~~lg~G~~g-~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~ 783 (973)
+.+..|..| .||+.... +++.+++|+-.. ....++..|...++.+. +--++++++++.+++..++|||+++
T Consensus 30 ~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~------~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~ 103 (272)
T 4gkh_A 30 ARDNVGQSGATIYRLYGKPNAPELFLKHGKG------SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIP 103 (272)
T ss_dssp EEEECSSSSCEEEEEECCTTCCCEEEEEEET------HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCC
T ss_pred EEccCCCcCCeEEEEEecCCCeEEEEEECCC------CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeC
Confidence 345667666 58998664 567899998642 22467788888887773 3347788999988889999999999
Q ss_pred CCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCC----------------------------------------
Q 002069 784 MGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNC---------------------------------------- 823 (973)
Q Consensus 784 ~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~---------------------------------------- 823 (973)
|.++.+...... .....++.+++..++.||+..
T Consensus 104 G~~~~~~~~~~~-------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (272)
T 4gkh_A 104 GKTAFQVLEEYP-------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPV 176 (272)
T ss_dssp SEEHHHHHHHCG-------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCH
T ss_pred CccccccccCCH-------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHH
Confidence 988876653211 223456667777777777531
Q ss_pred ---------------CCCeEeecCCCCCeeecCCCceEEecccccc
Q 002069 824 ---------------FPPIVHRDISSKNVLLNLEYEAHVSDFGISK 854 (973)
Q Consensus 824 ---------------~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~ 854 (973)
.+.++|||+.+.||+++.++.+-|+||+.+.
T Consensus 177 ~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 177 EQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 0237899999999999987777799999875
No 420
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=98.28 E-value=1.2e-07 Score=90.84 Aligned_cols=87 Identities=10% Similarity=0.104 Sum_probs=59.4
Q ss_pred cccccccccccccccccCccccccccccEEeecCcc-CCCCCCcccccc----cccCeeccccc-ccCCCcchhhccccc
Q 002069 481 NQLEYLDLSANTFHNSIPESLGNLVKLHYLNLSNNQ-FSQKIPNPIEKL----IHLSELDLSYK-IFGEEIPSQVCSMQS 554 (973)
Q Consensus 481 ~~L~~L~Ls~N~i~~~~~~~l~~l~~L~~L~L~~N~-l~~~~~~~~~~l----~~L~~L~ls~n-~i~~~~~~~~~~l~~ 554 (973)
.+|++||+|++.|++..-..+.++++|++|+|++|. |++.....+..+ ++|++|+|++| +|++.+-..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 357777777777776666666777777777777774 666555555553 35777777776 477777777777777
Q ss_pred cccccccccc-ccC
Q 002069 555 LEKLNLSHNN-LSG 567 (973)
Q Consensus 555 L~~L~L~~N~-l~~ 567 (973)
|++|+|++++ ++.
T Consensus 141 L~~L~L~~c~~Itd 154 (176)
T 3e4g_A 141 LKYLFLSDLPGVKE 154 (176)
T ss_dssp CCEEEEESCTTCCC
T ss_pred CCEEECCCCCCCCc
Confidence 7777777774 543
No 421
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=98.23 E-value=3.8e-07 Score=87.34 Aligned_cols=84 Identities=10% Similarity=0.099 Sum_probs=76.6
Q ss_pred ccccEEeecCccCCCCCCcccccccccCeeccccc-ccCCCcchhhccc----ccccccccccc-cccCccchhhhcccc
Q 002069 505 VKLHYLNLSNNQFSQKIPNPIEKLIHLSELDLSYK-IFGEEIPSQVCSM----QSLEKLNLSHN-NLSGSISRCFEEMHW 578 (973)
Q Consensus 505 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~n-~i~~~~~~~~~~l----~~L~~L~L~~N-~l~~~~~~~~~~l~~ 578 (973)
..|++||+++|.+++.....+.++++|+.|+|++| .|++.+-..++.+ ++|++|+|++| +|+..+...+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 57999999999999988888999999999999999 5999888888875 58999999999 499888889999999
Q ss_pred ccEEeCcCCC
Q 002069 579 LSCIDISYNA 588 (973)
Q Consensus 579 L~~l~l~~N~ 588 (973)
|+.|++++++
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 9999999984
No 422
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.22 E-value=3.9e-06 Score=88.91 Aligned_cols=78 Identities=17% Similarity=0.221 Sum_probs=60.4
Q ss_pred CcccccccCCCceeEEEEEcCCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCC---ceeeeceeeeccceeEEEE
Q 002069 703 FDDEHCIGNGGQGSVYKAELPTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHR---NIVKFYGFCSHALHSFVVY 779 (973)
Q Consensus 703 ~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~~~~~~~~~~~~~lv~ 779 (973)
....+.+|.|.++.||+++..+|+.|+||+....... ....|..|+..++.+++. .+++++++. ..++||
T Consensus 17 ~~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~---~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvm 89 (288)
T 3d1u_A 17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPA---LDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAM 89 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCC---CTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEE
T ss_pred ccceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcc---hhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEE
Confidence 3446789999999999998888999999996532211 135788999999999764 577777764 368999
Q ss_pred EecCCCCh
Q 002069 780 EYLEMGSL 787 (973)
Q Consensus 780 e~~~~~~L 787 (973)
||++++++
T Consensus 90 e~l~g~~~ 97 (288)
T 3d1u_A 90 EWVDERPP 97 (288)
T ss_dssp ECCCCCCC
T ss_pred EecccCCC
Confidence 99999874
No 423
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.17 E-value=7.6e-06 Score=87.85 Aligned_cols=137 Identities=17% Similarity=0.113 Sum_probs=94.6
Q ss_pred cccccCCCceeEEEEEcCCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCC---ceeeeceeee-ccceeEEEEEe
Q 002069 706 EHCIGNGGQGSVYKAELPTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHR---NIVKFYGFCS-HALHSFVVYEY 781 (973)
Q Consensus 706 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~~~~~~~-~~~~~~lv~e~ 781 (973)
.+.++.|....||+. ++.+++|+... ......+..|..+++.+.+. .+++++.++. ..+..++||||
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~-----~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~ 94 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS-----QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRK 94 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS-----HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEEC
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC-----chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEec
Confidence 456888999999998 56788888532 22356788999999988642 3566677664 44567899999
Q ss_pred cCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhC---------------------------------------
Q 002069 782 LEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTN--------------------------------------- 822 (973)
Q Consensus 782 ~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~--------------------------------------- 822 (973)
++|.++.+..- ..++..+...++.++++.++.||+.
T Consensus 95 i~G~~l~~~~~-----~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~ 169 (306)
T 3tdw_A 95 VQGQILGEDGM-----AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLR 169 (306)
T ss_dssp CCSEECHHHHH-----TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHH
T ss_pred cCCeECchhhh-----hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhH
Confidence 99988865321 1233444555555555555555542
Q ss_pred ------------------CCCCeEeecCCCCCeeecC---CCc-eEEecccccccc
Q 002069 823 ------------------CFPPIVHRDISSKNVLLNL---EYE-AHVSDFGISKFL 856 (973)
Q Consensus 823 ------------------~~~~i~H~Dlk~~Nill~~---~~~-~kl~Dfg~a~~~ 856 (973)
..+.++|+|+++.||+++. ++. +.|+||+.+..-
T Consensus 170 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g 225 (306)
T 3tdw_A 170 DYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS 225 (306)
T ss_dssp HHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred HHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence 1235699999999999987 455 489999987643
No 424
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.13 E-value=7.1e-06 Score=90.18 Aligned_cols=145 Identities=12% Similarity=0.189 Sum_probs=90.7
Q ss_pred CcccccccCCCceeEEEEEcCCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCc--eeeeceeeecc-ceeEEEE
Q 002069 703 FDDEHCIGNGGQGSVYKAELPTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRN--IVKFYGFCSHA-LHSFVVY 779 (973)
Q Consensus 703 ~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~~~~~~~-~~~~lv~ 779 (973)
....+.++.|....+|+.+. +++.+++|+.... ..+..|..++..+.... ++++++++... +..|+||
T Consensus 43 ~~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~--------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~ 113 (362)
T 3ovc_A 43 VSDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA--------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCIS 113 (362)
T ss_dssp CEEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC--------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEE
T ss_pred CceEEECCCCCcceEEEEEE-CCcEEEEEeCCch--------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEE
Confidence 34567789999999999976 6788999987532 25777888888775433 56677776654 5689999
Q ss_pred EecCCCChHHH---------------h---ccCccc-----c---------CCCHHHH---------------------H
Q 002069 780 EYLEMGSLAMI---------------L---SNDAAA-----E---------EFGWTKR---------------------M 806 (973)
Q Consensus 780 e~~~~~~L~~~---------------l---~~~~~~-----~---------~~~~~~~---------------------~ 806 (973)
||++|.++.+. + +..... . .-.|... .
T Consensus 114 e~l~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~ 193 (362)
T 3ovc_A 114 RRAQGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSA 193 (362)
T ss_dssp ECCCSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHH
T ss_pred EecCCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 99998665421 0 100000 0 0011111 0
Q ss_pred HHHHHHHHHHHHHhhCC-CCCeEeecCCCCCeeecCCCceEEecccccccc
Q 002069 807 NAIKGVADALLYMHTNC-FPPIVHRDISSKNVLLNLEYEAHVSDFGISKFL 856 (973)
Q Consensus 807 ~i~~~i~~~l~~LH~~~-~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~ 856 (973)
.....+....+++.... .+.++|+|+.+.||+++.++.+.|+||+.+..-
T Consensus 194 ~~~~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 194 SVAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp HHHHHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred cchHHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 11112222233332211 136899999999999987777889999998654
No 425
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.95 E-value=8.1e-06 Score=89.99 Aligned_cols=84 Identities=6% Similarity=-0.038 Sum_probs=54.6
Q ss_pred cccc-cCCCceeEEEEEcC-------CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCC-C--Cceeeeceeeecc--
Q 002069 706 EHCI-GNGGQGSVYKAELP-------TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIR-H--RNIVKFYGFCSHA-- 772 (973)
Q Consensus 706 ~~~l-g~G~~g~V~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h--~niv~~~~~~~~~-- 772 (973)
.+.| +.|....+|+.... +++.+++|+..............+..|..+++.+. + -.+++++.++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 4567 88889999998653 26789999865422000000134566777777663 2 3567788877655
Q ss_pred -ceeEEEEEecCCCChHH
Q 002069 773 -LHSFVVYEYLEMGSLAM 789 (973)
Q Consensus 773 -~~~~lv~e~~~~~~L~~ 789 (973)
+..++||||++|..+.+
T Consensus 105 ~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp TSSCEEEEECCCCBCCCB
T ss_pred cCCceEEEEecCCCChhh
Confidence 35689999999877653
No 426
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.95 E-value=1.4e-06 Score=85.02 Aligned_cols=109 Identities=17% Similarity=0.222 Sum_probs=59.4
Q ss_pred cccccccccccc-ccccc----cCccccccccccEEeecCccCCCCCC----cccccccccCeecccccccCCCcchhhc
Q 002069 480 LNQLEYLDLSAN-TFHNS----IPESLGNLVKLHYLNLSNNQFSQKIP----NPIEKLIHLSELDLSYKIFGEEIPSQVC 550 (973)
Q Consensus 480 l~~L~~L~Ls~N-~i~~~----~~~~l~~l~~L~~L~L~~N~l~~~~~----~~~~~l~~L~~L~ls~n~i~~~~~~~~~ 550 (973)
.++|++|+|++| .|.+. +.+++..-+.|+.|+|++|+|++... +.+...+.|+.|+|++|.|++.+...++
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala 119 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLL 119 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHH
T ss_pred CCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHH
Confidence 345666666653 55432 23334444556666666666654333 2334456666666666666655554443
Q ss_pred ----ccccccccccccc---cccCc----cchhhhccccccEEeCcCCC
Q 002069 551 ----SMQSLEKLNLSHN---NLSGS----ISRCFEEMHWLSCIDISYNA 588 (973)
Q Consensus 551 ----~l~~L~~L~L~~N---~l~~~----~~~~~~~l~~L~~l~l~~N~ 588 (973)
..+.|++|+|++| .+... +..++..-+.|+.|+++.|.
T Consensus 120 ~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~ 168 (197)
T 1pgv_A 120 RSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFAS 168 (197)
T ss_dssp HHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCC
T ss_pred HHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCC
Confidence 3445777777654 33322 23445556677777776653
No 427
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.90 E-value=1.4e-06 Score=85.04 Aligned_cols=84 Identities=15% Similarity=0.175 Sum_probs=42.8
Q ss_pred ccceeeccCCccCC----CCCcccccccccccccccccccccccC----ccccccccccEEeecCc---cCCCC----CC
Q 002069 458 SLIQLILNNNELSG----QLSPELGSLNQLEYLDLSANTFHNSIP----ESLGNLVKLHYLNLSNN---QFSQK----IP 522 (973)
Q Consensus 458 ~L~~L~l~~N~l~~----~~~~~l~~l~~L~~L~Ls~N~i~~~~~----~~l~~l~~L~~L~L~~N---~l~~~----~~ 522 (973)
.|+.|+|++|.|.+ .+.+++...++|++|+|++|.|++... +++..-+.|++|+|++| ++... +.
T Consensus 71 ~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia 150 (197)
T 1pgv_A 71 HIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMM 150 (197)
T ss_dssp CCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHH
T ss_pred CcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHH
Confidence 34444444444432 233455556667777777777765332 33444455777777654 33322 22
Q ss_pred cccccccccCeeccccccc
Q 002069 523 NPIEKLIHLSELDLSYKIF 541 (973)
Q Consensus 523 ~~~~~l~~L~~L~ls~n~i 541 (973)
+.+...+.|+.|++++|.+
T Consensus 151 ~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 151 MAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHHCSSCCEEECCCCCH
T ss_pred HHHHhCCCcCeEeccCCCc
Confidence 3444445555555555543
No 428
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.73 E-value=5.7e-05 Score=84.48 Aligned_cols=78 Identities=17% Similarity=0.076 Sum_probs=48.5
Q ss_pred cccccCCCceeEEEEEcC-CCCEEEEEEcCCCCC--cc--hhhHHHHHHHHHHhhcCCC--C-ceeeeceeeeccceeEE
Q 002069 706 EHCIGNGGQGSVYKAELP-TGEIVAVKKFHSPLP--GE--MACQQEFLNEGNALTKIRH--R-NIVKFYGFCSHALHSFV 777 (973)
Q Consensus 706 ~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~--~~~~~~~~~e~~~l~~l~h--~-niv~~~~~~~~~~~~~l 777 (973)
.+.+|.|.++.||++... +++.|+||....... .. ......+..|.++++.+.. + .+++++.+. ++..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d--~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc--CCccEE
Confidence 467999999999999654 568899998653211 00 0112445677777776632 3 445566543 445689
Q ss_pred EEEecCCC
Q 002069 778 VYEYLEMG 785 (973)
Q Consensus 778 v~e~~~~~ 785 (973)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999864
No 429
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.70 E-value=7.3e-05 Score=81.76 Aligned_cols=140 Identities=19% Similarity=0.252 Sum_probs=77.3
Q ss_pred ccccCCCceeEEEEEcCCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCC--CCceeeece------eeeccceeEEE
Q 002069 707 HCIGNGGQGSVYKAELPTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIR--HRNIVKFYG------FCSHALHSFVV 778 (973)
Q Consensus 707 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~niv~~~~------~~~~~~~~~lv 778 (973)
+.++.|..+.||++...+| .+++|+.... ...+..|..+++.+. .-.+++++. +....+..++|
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~-------~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l 109 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP-------EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVV 109 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC-------HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEE
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC-------HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEE
Confidence 4466677899999987554 5899998742 122333444444332 113344443 11345677899
Q ss_pred EEecCCCChH-----------HH---hccCcc----c-------cCCCHHHH----------------------------
Q 002069 779 YEYLEMGSLA-----------MI---LSNDAA----A-------EEFGWTKR---------------------------- 805 (973)
Q Consensus 779 ~e~~~~~~L~-----------~~---l~~~~~----~-------~~~~~~~~---------------------------- 805 (973)
|||++|..+. .. ++.... . ....|...
T Consensus 110 ~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 189 (346)
T 2q83_A 110 YDWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYL 189 (346)
T ss_dssp EECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHH
T ss_pred EEeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHH
Confidence 9999986542 00 111000 0 01122211
Q ss_pred ---HHHHHHHHHHHHHHhh----------CCCCCeEeecCCCCCeeecCCCceEEecccccc
Q 002069 806 ---MNAIKGVADALLYMHT----------NCFPPIVHRDISSKNVLLNLEYEAHVSDFGISK 854 (973)
Q Consensus 806 ---~~i~~~i~~~l~~LH~----------~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~ 854 (973)
..+..++..++++|++ .....++|||+++.||+++.++.+.++||+.+.
T Consensus 190 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 190 QEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 0111223445666653 012489999999999999888899999999875
No 430
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.66 E-value=0.00019 Score=76.54 Aligned_cols=139 Identities=17% Similarity=0.171 Sum_probs=91.6
Q ss_pred ccccccCCCceeEEEEEcCCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCC---CCceeeeceeeeccceeEEEEEe
Q 002069 705 DEHCIGNGGQGSVYKAELPTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIR---HRNIVKFYGFCSHALHSFVVYEY 781 (973)
Q Consensus 705 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~ 781 (973)
..+.++.|.+..+|+... +++.+++|+.... ....+..|...++.+. ...++++++++...+..++||||
T Consensus 40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~------~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~ 112 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND-EVQTVFVKINERS------YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEA 112 (312)
T ss_dssp EEEEECCSSSSEEEEEES-SSCEEEEEEEEGG------GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEEC
T ss_pred eeEEeCCccceeeeEEEE-CCCeEEEEeCCcc------cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEe
Confidence 346789999999999987 5778899986521 2467888888888773 36788889888877889999999
Q ss_pred cCCCChH--------HH---hccCcc----cc---------------CCCHHHHH---HHH----------------HHH
Q 002069 782 LEMGSLA--------MI---LSNDAA----AE---------------EFGWTKRM---NAI----------------KGV 812 (973)
Q Consensus 782 ~~~~~L~--------~~---l~~~~~----~~---------------~~~~~~~~---~i~----------------~~i 812 (973)
+++..+. .. ++.... .. .-+|.... ++. ..+
T Consensus 113 l~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l 192 (312)
T 3jr1_A 113 LNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLI 192 (312)
T ss_dssp CCCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHH
T ss_pred ccCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHH
Confidence 9988642 11 111111 00 11344321 111 111
Q ss_pred HHH-HHHHhh-CCCCCeEeecCCCCCeeecCCCceEEeccc
Q 002069 813 ADA-LLYMHT-NCFPPIVHRDISSKNVLLNLEYEAHVSDFG 851 (973)
Q Consensus 813 ~~~-l~~LH~-~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg 851 (973)
+.. .+.|.. ...+.++|+|+.+.|++++.++ +.++||+
T Consensus 193 ~~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 193 VQIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 111 223432 1235799999999999999887 8899984
No 431
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.50 E-value=0.00031 Score=78.99 Aligned_cols=76 Identities=13% Similarity=0.127 Sum_probs=47.1
Q ss_pred CCeEeecCCCCCeeecCCCceEEecccccccccCCCCcccccc--cccCcccccccccCC---CCCccchHHHHHHHHHH
Q 002069 825 PPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKLGLSNRTELA--GTFGYIAPELAYTMK---VTEKCDVYSFGVLALEV 899 (973)
Q Consensus 825 ~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~--g~~~y~aPE~~~~~~---~~~~~Dv~slG~~l~el 899 (973)
+.++|||+++.||+++.++ ++++||+.+..-.+...- .... -...|.+|+...... .....++......+|+.
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dl-a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDI-GAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNL 309 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHH-HHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHH-HHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHH
Confidence 3899999999999999876 999999988754322110 0011 123466666543211 12234556778888877
Q ss_pred HhC
Q 002069 900 IKG 902 (973)
Q Consensus 900 ~tg 902 (973)
.++
T Consensus 310 y~~ 312 (420)
T 2pyw_A 310 FNK 312 (420)
T ss_dssp HHH
T ss_pred HHH
Confidence 754
No 432
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.36 E-value=0.00055 Score=72.58 Aligned_cols=80 Identities=16% Similarity=0.221 Sum_probs=57.1
Q ss_pred cCCcccccccCCCceeEEEEEcCCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCC-C--CceeeeceeeeccceeEE
Q 002069 701 KNFDDEHCIGNGGQGSVYKAELPTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIR-H--RNIVKFYGFCSHALHSFV 777 (973)
Q Consensus 701 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h--~niv~~~~~~~~~~~~~l 777 (973)
....-++.+|.|..+.||+.+..+|+.|+||+........ ...|..|...++.+. . --+++++++. ..++
T Consensus 15 ~~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~---~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~l 87 (288)
T 3f7w_A 15 REVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPAL---DGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTL 87 (288)
T ss_dssp CCEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCC---TTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEE
T ss_pred CCeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcch---hhHHHHHHHHHHHHHhhCCCCcceEEecc----CceE
Confidence 4556678899999999999999999999999875433221 245778888887763 2 2345555543 3479
Q ss_pred EEEecCCCCh
Q 002069 778 VYEYLEMGSL 787 (973)
Q Consensus 778 v~e~~~~~~L 787 (973)
||||++++..
T Consensus 88 v~e~l~~~~~ 97 (288)
T 3f7w_A 88 AMEWVDERPP 97 (288)
T ss_dssp EEECCCCCCC
T ss_pred EEEeecccCC
Confidence 9999987653
No 433
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.14 E-value=0.0011 Score=72.01 Aligned_cols=143 Identities=15% Similarity=0.112 Sum_probs=73.1
Q ss_pred cccccCCCcee-EEEEEcCCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCC--CCceeeeceeeeccceeEEEEEec
Q 002069 706 EHCIGNGGQGS-VYKAELPTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIR--HRNIVKFYGFCSHALHSFVVYEYL 782 (973)
Q Consensus 706 ~~~lg~G~~g~-V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~~~~~lv~e~~ 782 (973)
.+.++.|+... +|+....+++.+++|....... ..+..|+.+++.+. .-.+++++.+..+.+ ++|||++
T Consensus 23 ~~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~------~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l 94 (333)
T 3csv_A 23 RTPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG------GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDL 94 (333)
T ss_dssp ECC--------CCEEEECTTCCEEEEEECCTTTT------CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCC
T ss_pred eeECCCCCCCceEEEEEcCCCCeEEEEECCCCCC------ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeC
Confidence 34566665554 6788765477888887543311 12223444444442 223566676644333 7899999
Q ss_pred CCCChHHHhccCcc-----------------------ccCCCHHHHHH--------------------HHHHHHHHHHHH
Q 002069 783 EMGSLAMILSNDAA-----------------------AEEFGWTKRMN--------------------AIKGVADALLYM 819 (973)
Q Consensus 783 ~~~~L~~~l~~~~~-----------------------~~~~~~~~~~~--------------------i~~~i~~~l~~L 819 (973)
++..+.+++..... ...++...... ....+...++.+
T Consensus 95 ~~~~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l 174 (333)
T 3csv_A 95 GDALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQI 174 (333)
T ss_dssp CSCBHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHH
T ss_pred CCcchHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Confidence 87776654432110 00111111000 001111222222
Q ss_pred hh---CCCCCeEeecCCCCCeeecCC----CceEEecccccccc
Q 002069 820 HT---NCFPPIVHRDISSKNVLLNLE----YEAHVSDFGISKFL 856 (973)
Q Consensus 820 H~---~~~~~i~H~Dlk~~Nill~~~----~~~kl~Dfg~a~~~ 856 (973)
.+ .....++|||+.+.||+++.+ +.+.++||+.+..-
T Consensus 175 ~~~~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 175 LSAQLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp HHHHCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred HHhcccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 11 112478999999999999875 67899999988644
No 434
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.14 E-value=0.0041 Score=67.12 Aligned_cols=159 Identities=13% Similarity=0.121 Sum_probs=88.1
Q ss_pred cccHHHHHHHhcCCcc-----cccccCCCceeEEEEEcCCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCC--Cce
Q 002069 690 KIVHEEIIRATKNFDD-----EHCIGNGGQGSVYKAELPTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRH--RNI 762 (973)
Q Consensus 690 ~~~~~~~~~~~~~~~~-----~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~ni 762 (973)
..+.+.+....+.|.+ ...++ |....||++...+|+.+++|+....... ...+..|..++..+.. -.+
T Consensus 10 ~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~~----~~~~~~E~~~~~~L~~~g~~v 84 (328)
T 1zyl_A 10 TLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPERWT----ADQILEEHQFALQLVNDEVPV 84 (328)
T ss_dssp CCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTTSC----HHHHHHHHHHHHHHHHTTCSB
T ss_pred CCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCCCC----HHHHHHHHHHHHHHHHcCCee
Confidence 3455666655555543 23466 8888999998777878999998643211 2455567766666532 124
Q ss_pred eeecee-----eeccceeEEEEEecCCCChH-----HH---------hc----cCcc--ccCCCHHHH------------
Q 002069 763 VKFYGF-----CSHALHSFVVYEYLEMGSLA-----MI---------LS----NDAA--AEEFGWTKR------------ 805 (973)
Q Consensus 763 v~~~~~-----~~~~~~~~lv~e~~~~~~L~-----~~---------l~----~~~~--~~~~~~~~~------------ 805 (973)
++++.. ....+..++||+|++|..+. .+ ++ .... ....++...
T Consensus 85 p~~~~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 164 (328)
T 1zyl_A 85 AAPVAFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDAT 164 (328)
T ss_dssp CCCCCBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCS
T ss_pred cceeecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcC
Confidence 444443 12245668899999875432 00 01 0000 011222111
Q ss_pred ----------HHHHHHHHHHHHHHhh-CCCCCeEeecCCCCCeeecCCCceEEeccccccc
Q 002069 806 ----------MNAIKGVADALLYMHT-NCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKF 855 (973)
Q Consensus 806 ----------~~i~~~i~~~l~~LH~-~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~ 855 (973)
...+.+++..++.... .....++|||+++.||+++ + .+.++||+.+..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 165 LIPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp SSCTTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 1111122222222111 1223689999999999999 4 899999998754
No 435
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.94 E-value=0.0058 Score=65.69 Aligned_cols=158 Identities=11% Similarity=0.123 Sum_probs=85.7
Q ss_pred ccHHHHHHHhcCCcc-----cccccCCCceeEEEEEcCCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCC--cee
Q 002069 691 IVHEEIIRATKNFDD-----EHCIGNGGQGSVYKAELPTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHR--NIV 763 (973)
Q Consensus 691 ~~~~~~~~~~~~~~~-----~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~--niv 763 (973)
++.+++.....+|.. .+.++.|....+|+....+| .+++|+...... ...+..|..++..+... .++
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~~-----~~~l~~e~~~l~~L~~~g~~vP 80 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRVE-----KNDLPFFLGLMQHLAAKGLSCP 80 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC--------CCHHHHHHHHHHHHHHTTCCCC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCCC-----HHHHHHHHHHHHHHHHCCCCCC
Confidence 455666666666765 34567788899999987555 688898865211 12344555555554211 133
Q ss_pred eecee------eeccceeEEEEEecCCCChHH-----H---------hccC----ccc--cCC---CHHHHHH-------
Q 002069 764 KFYGF------CSHALHSFVVYEYLEMGSLAM-----I---------LSND----AAA--EEF---GWTKRMN------- 807 (973)
Q Consensus 764 ~~~~~------~~~~~~~~lv~e~~~~~~L~~-----~---------l~~~----~~~--~~~---~~~~~~~------- 807 (973)
+++.. ....+..++||+|++|..+.. + ++.. ... ... .|.....
T Consensus 81 ~~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 160 (322)
T 2ppq_A 81 LPLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERAD 160 (322)
T ss_dssp CBCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGG
T ss_pred cccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHH
Confidence 34322 122356789999999865321 0 1110 000 001 1221110
Q ss_pred -----HHHHHHHHHHHHhhC----CCCCeEeecCCCCCeeecCCCceEEecccccc
Q 002069 808 -----AIKGVADALLYMHTN----CFPPIVHRDISSKNVLLNLEYEAHVSDFGISK 854 (973)
Q Consensus 808 -----i~~~i~~~l~~LH~~----~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~ 854 (973)
+...+...++++++. ...+++|+|+.+.||+++.++.+.++||+.+.
T Consensus 161 ~~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 161 EVEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp GTSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 001234445555532 12378999999999999977666899999875
No 436
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.88 E-value=0.0019 Score=68.90 Aligned_cols=71 Identities=11% Similarity=0.027 Sum_probs=42.8
Q ss_pred cccccCCCceeEEEEEcCCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCce-eeeceeeeccceeEEEEEec-C
Q 002069 706 EHCIGNGGQGSVYKAELPTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNI-VKFYGFCSHALHSFVVYEYL-E 783 (973)
Q Consensus 706 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~-~ 783 (973)
.+.++.|....+|++ +.+++|+........ .....|..+++.+....+ +++++++ ++..++|+||+ +
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~----~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~ 91 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEEY----INRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAG 91 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC----C----CCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTT
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccce----eCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCC
Confidence 678999999999999 568889876432111 112346655555522122 5566554 33457899999 6
Q ss_pred CCCh
Q 002069 784 MGSL 787 (973)
Q Consensus 784 ~~~L 787 (973)
+.++
T Consensus 92 g~~l 95 (301)
T 3dxq_A 92 AQTM 95 (301)
T ss_dssp CEEC
T ss_pred CccC
Confidence 5444
No 437
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.79 E-value=0.0033 Score=68.84 Aligned_cols=142 Identities=17% Similarity=0.203 Sum_probs=82.7
Q ss_pred cccccCCCceeEEEEEcC--------CCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCC-CCceeeeceeeeccceeE
Q 002069 706 EHCIGNGGQGSVYKAELP--------TGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIR-HRNIVKFYGFCSHALHSF 776 (973)
Q Consensus 706 ~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~ 776 (973)
.+.+..|-...+|++... +++.|++|+...... ....+.+|..+++.+. +.-.+++++++.+ .
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~----~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g 126 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQ----GVDSLVLESVMFAILAERSLGPQLYGVFPE----G 126 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---C----CHHHHHHHHHHHHHHHHTTSSCCEEEEETT----E
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccc----hHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----c
Confidence 356777888999999875 357899999643211 1345568888887773 3334667776654 2
Q ss_pred EEEEecCCCChHHH-h----------------ccCc--cccCCC--HHHHHHHHHHHHH-------------------HH
Q 002069 777 VVYEYLEMGSLAMI-L----------------SNDA--AAEEFG--WTKRMNAIKGVAD-------------------AL 816 (973)
Q Consensus 777 lv~e~~~~~~L~~~-l----------------~~~~--~~~~~~--~~~~~~i~~~i~~-------------------~l 816 (973)
+||||++|.++..- + +... ...+.. +.++.++..++.. .+
T Consensus 127 ~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~ 206 (379)
T 3feg_A 127 RLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEM 206 (379)
T ss_dssp EEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHH
T ss_pred cEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHH
Confidence 99999998655311 0 1110 011222 3455545443321 22
Q ss_pred HH----HhhC-CCCCeEeecCCCCCeeecCC----CceEEeccccccc
Q 002069 817 LY----MHTN-CFPPIVHRDISSKNVLLNLE----YEAHVSDFGISKF 855 (973)
Q Consensus 817 ~~----LH~~-~~~~i~H~Dlk~~Nill~~~----~~~kl~Dfg~a~~ 855 (973)
++ |... ....++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 207 ~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 207 GNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 23 3221 12368999999999999876 7899999998764
No 438
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.69 E-value=0.0019 Score=72.37 Aligned_cols=73 Identities=19% Similarity=0.263 Sum_probs=49.2
Q ss_pred cccccCCCceeEEEEEcCC--------CCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCC-CCceeeeceeeeccceeE
Q 002069 706 EHCIGNGGQGSVYKAELPT--------GEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIR-HRNIVKFYGFCSHALHSF 776 (973)
Q Consensus 706 ~~~lg~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~ 776 (973)
.+.|+.|....||++...+ ++.|++|+.... .. ...+..|..+++.+. +.-.+++++.+.+ .
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~---~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g 148 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ET---ESHLVAESVIFTLLSERHLGPKLYGIFSG----G 148 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CC---HHHHHHHHHHHHHHHHTTSSSCEEEEETT----E
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--Cc---HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----C
Confidence 4568889899999997653 578999998532 11 134456888877773 3334667776543 3
Q ss_pred EEEEecCCCCh
Q 002069 777 VVYEYLEMGSL 787 (973)
Q Consensus 777 lv~e~~~~~~L 787 (973)
+|+||++|.++
T Consensus 149 ~v~e~l~G~~l 159 (429)
T 1nw1_A 149 RLEEYIPSRPL 159 (429)
T ss_dssp EEECCCCEEEC
T ss_pred EEEEEeCCccc
Confidence 89999986443
No 439
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.48 E-value=0.0038 Score=56.82 Aligned_cols=56 Identities=29% Similarity=0.367 Sum_probs=33.4
Q ss_pred EEEccCCcCc-ccCCccccCccccceeeccCCcCCCCCCCccccCCccceeeccccccc
Q 002069 76 YIDIGNNLLS-GSIPNEVGSLKSLSDLRLSNNSLNGSIPSSLGNLTNLVTLYLHMNALS 133 (973)
Q Consensus 76 ~L~l~~n~l~-~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~ 133 (973)
+++.+++.++ ..+|..+. .+|++|+|++|+|+...+..|..+++|++|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 5666666664 24554443 25666777777776444445566666666666666654
No 440
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.40 E-value=0.0065 Score=68.38 Aligned_cols=74 Identities=14% Similarity=0.086 Sum_probs=46.5
Q ss_pred cccccCCCceeEEEEEcCC-CCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCc-eeeeceeeeccceeEEEEEecC
Q 002069 706 EHCIGNGGQGSVYKAELPT-GEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRN-IVKFYGFCSHALHSFVVYEYLE 783 (973)
Q Consensus 706 ~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~~~~lv~e~~~ 783 (973)
.+.|+.|-...+|++...+ ++.|++|+........ -+-..|..+++.+...+ .+++++++.. ..||||++
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~----idR~~E~~vl~~L~~~gl~P~ll~~~~~----G~v~e~I~ 184 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI----INREREKKISCILYNKNIAKKIYVFFTN----GRIEEFMD 184 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSC----SCHHHHHHHHHHHTTSSSBCCEEEEETT----EEEEECCC
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhh----cCHHHHHHHHHHHHhcCCCCCEEEEeCC----eEEEEeeC
Confidence 4568888899999998754 4789999875432111 11146777777774333 3567777632 35999998
Q ss_pred CCCh
Q 002069 784 MGSL 787 (973)
Q Consensus 784 ~~~L 787 (973)
|.++
T Consensus 185 G~~l 188 (458)
T 2qg7_A 185 GYAL 188 (458)
T ss_dssp SEEC
T ss_pred CccC
Confidence 7544
No 441
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.37 E-value=0.0083 Score=58.64 Aligned_cols=103 Identities=16% Similarity=0.079 Sum_probs=65.9
Q ss_pred CChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCeeecCCCceEEecccccccccCCCCccc
Q 002069 785 GSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNVLLNLEYEAHVSDFGISKFLKLGLSNRT 864 (973)
Q Consensus 785 ~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 864 (973)
-+|.++|+... .+++++++|.++.|.+.++.-.-... .-..+=+.|..|++..+|.|...+ +.+.
T Consensus 33 vSL~eIL~~~~--~PlsEEqaWALc~Qc~~~L~~~~~~~--~~~~~i~~~~~i~l~~dG~V~f~~-~~s~---------- 97 (229)
T 2yle_A 33 LSLEEILRLYN--QPINEEQAWAVCYQCCGSLRAAARRR--QPRHRVRSAAQIRVWRDGAVTLAP-AADD---------- 97 (229)
T ss_dssp EEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCSGGGEEEETTSCEEECC-C-------------
T ss_pred ccHHHHHHHcC--CCcCHHHHHHHHHHHHHHHHhhhhcc--cCCceecCCcceEEecCCceeccc-cccc----------
Confidence 47888886543 58999999999999999987762211 111233456888999999988764 1110
Q ss_pred ccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCC
Q 002069 865 ELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 905 (973)
Q Consensus 865 ~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p 905 (973)
.....+.|||... ...+.+.=|||+|+++|..+--..|
T Consensus 98 --~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 --AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp -----------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred --ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 1123466888653 3456788999999999999854444
No 442
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.20 E-value=0.029 Score=60.57 Aligned_cols=32 Identities=25% Similarity=0.288 Sum_probs=28.0
Q ss_pred CCeEeecCCCCCeeecCCCceEEecccccccc
Q 002069 825 PPIVHRDISSKNVLLNLEYEAHVSDFGISKFL 856 (973)
Q Consensus 825 ~~i~H~Dlk~~Nill~~~~~~kl~Dfg~a~~~ 856 (973)
..++|+|+.+.||+++.++.+.++||+.+..-
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~ 237 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA 237 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence 37899999999999998888999999887643
No 443
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.15 E-value=0.0055 Score=55.71 Aligned_cols=37 Identities=22% Similarity=0.145 Sum_probs=20.4
Q ss_pred ccceeeccccccccccccccCCCCcccEEecCCcccC
Q 002069 193 SLSDLRLDYNTLSGSILYSFGNLTKLEILYLDVNALS 229 (973)
Q Consensus 193 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~i~ 229 (973)
+|++|+|++|+|+.++...|..+++|+.|+|++|.+.
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4555555555555555555555555555555555443
No 444
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=95.98 E-value=0.0084 Score=65.90 Aligned_cols=74 Identities=11% Similarity=0.066 Sum_probs=42.9
Q ss_pred cccccCCCceeEEEEEcCC---------CCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCC-CCceeeeceeeecccee
Q 002069 706 EHCIGNGGQGSVYKAELPT---------GEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIR-HRNIVKFYGFCSHALHS 775 (973)
Q Consensus 706 ~~~lg~G~~g~V~~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~ 775 (973)
.+.++.|....+|++...+ ++.|++|+....... ..+...|..+++.+. +.-.+++++... .
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~----~~~~~~E~~~l~~L~~~g~~P~~~~~~~----~ 109 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE----LYNTISEFEVYKTMSKYKIAPQLLNTFN----G 109 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG----TSCHHHHHHHHHHHHHTTSSCCEEEEET----T
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc----eecHHHHHHHHHHHHhcCCCCceEEecC----C
Confidence 4567888889999997654 278999987643111 112245666666653 222446665442 3
Q ss_pred EEEEEecCCCCh
Q 002069 776 FVVYEYLEMGSL 787 (973)
Q Consensus 776 ~lv~e~~~~~~L 787 (973)
++||||++|..+
T Consensus 110 ~~v~e~i~G~~l 121 (369)
T 3c5i_A 110 GRIEEWLYGDPL 121 (369)
T ss_dssp EEEEECCCSEEC
T ss_pred cEEEEEecCCcC
Confidence 689999997543
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.45 E-value=0.029 Score=61.55 Aligned_cols=146 Identities=17% Similarity=0.199 Sum_probs=83.0
Q ss_pred cccccCCCceeEEEEEcCC--------CCEEEEEEcCCCCCc--------chhhH-------HHHHHHHHHhhcC-CCCc
Q 002069 706 EHCIGNGGQGSVYKAELPT--------GEIVAVKKFHSPLPG--------EMACQ-------QEFLNEGNALTKI-RHRN 761 (973)
Q Consensus 706 ~~~lg~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~--------~~~~~-------~~~~~e~~~l~~l-~h~n 761 (973)
++.+..|-...+|++..++ ++.|.+++.-..... ....+ +....|..+++.+ ++.-
T Consensus 57 v~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi 136 (401)
T 3f2s_A 57 ISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSL 136 (401)
T ss_dssp EEEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTS
T ss_pred EEEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCC
Confidence 3456668888999997754 378999987543210 00011 1223477777777 3445
Q ss_pred eeeeceeeeccceeEEEEEecCCCChHH--Hh---------------ccC--ccccCCC--HHHHHHHHHHHH-------
Q 002069 762 IVKFYGFCSHALHSFVVYEYLEMGSLAM--IL---------------SND--AAAEEFG--WTKRMNAIKGVA------- 813 (973)
Q Consensus 762 iv~~~~~~~~~~~~~lv~e~~~~~~L~~--~l---------------~~~--~~~~~~~--~~~~~~i~~~i~------- 813 (973)
.+++++++..+ +|+||++|.++.. +. +.. ....... +..+.++..++.
T Consensus 137 ~Pkl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~ 212 (401)
T 3f2s_A 137 GPKLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEE 212 (401)
T ss_dssp SCCEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSH
T ss_pred CCeEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcch
Confidence 66778776532 8999999755421 10 111 0011222 223333333221
Q ss_pred ---------------HHH----HHHhhC-CCCCeEeecCCCCCeeecCC------CceEEeccccccc
Q 002069 814 ---------------DAL----LYMHTN-CFPPIVHRDISSKNVLLNLE------YEAHVSDFGISKF 855 (973)
Q Consensus 814 ---------------~~l----~~LH~~-~~~~i~H~Dlk~~Nill~~~------~~~kl~Dfg~a~~ 855 (973)
..+ +++... ....++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 213 ~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 213 SRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 112 223222 12357899999999999877 7899999998753
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.16 E-value=0.08 Score=58.66 Aligned_cols=74 Identities=7% Similarity=-0.012 Sum_probs=46.8
Q ss_pred cccccCCCceeEEEEEcCC--------CCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCC-CCceeeeceeeeccceeE
Q 002069 706 EHCIGNGGQGSVYKAELPT--------GEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIR-HRNIVKFYGFCSHALHSF 776 (973)
Q Consensus 706 ~~~lg~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~ 776 (973)
++.+..|-...+|+....+ ++.|++|+........ -+..+|..+++.+. +.-.+++++.+. .+
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~----idR~~E~~~l~~L~~~gi~P~l~~~~~----~~ 146 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKF----YDSKVELDVFRYLSNINIAPNIIADFP----EG 146 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CC----CCHHHHHHHHHHHHHTTSSCCEEEEET----TE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchh----cCHHHHHHHHHHHHhcCCCCCEEEEcC----CC
Confidence 4567778889999997653 6889999975432111 12235666666553 333455665442 37
Q ss_pred EEEEecCCCCh
Q 002069 777 VVYEYLEMGSL 787 (973)
Q Consensus 777 lv~e~~~~~~L 787 (973)
.||||++|..+
T Consensus 147 ~I~efI~G~~l 157 (424)
T 3mes_A 147 RIEEFIDGEPL 157 (424)
T ss_dssp EEEECCCSEEC
T ss_pred EEEEEeCCccC
Confidence 89999998654
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=91.82 E-value=0.23 Score=54.89 Aligned_cols=29 Identities=28% Similarity=0.449 Sum_probs=24.7
Q ss_pred eEeecCCCCCeee------cCCCceEEeccccccc
Q 002069 827 IVHRDISSKNVLL------NLEYEAHVSDFGISKF 855 (973)
Q Consensus 827 i~H~Dlk~~Nill------~~~~~~kl~Dfg~a~~ 855 (973)
++|+|+.+.||++ +++..++++||..|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5799999999999 4457799999998864
No 448
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=85.43 E-value=1.7 Score=42.49 Aligned_cols=116 Identities=9% Similarity=0.077 Sum_probs=78.7
Q ss_pred CCCceeeeceeeeccceeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCCCeEeecCCCCCe
Q 002069 758 RHRNIVKFYGFCSHALHSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFPPIVHRDISSKNV 837 (973)
Q Consensus 758 ~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~i~H~Dlk~~Ni 837 (973)
.||++++. .+-.+++...+.++.- .....|-. -...+...+++++.+|+...++++.. +|--+.|+|+
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~--~~~~~f~~----ik~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~NL 110 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDIN--DNHTPFDN----IKSFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDEL 110 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCC--TTSEEGGG----GGGSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGGE
T ss_pred cCCcccce-EEEEcccEEEEEEEcC--cccCCHHH----HHhcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecceE
Confidence 68888766 4555555555555543 33332221 23467899999999999998777766 8889999999
Q ss_pred eecCCCceEEecccccccccCCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCc
Q 002069 838 LLNLEYEAHVSDFGISKFLKLGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRD 907 (973)
Q Consensus 838 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~ 907 (973)
+++.++.+++.=.|+...+. |. ..+...=.-.+=+++..+++++..|+
T Consensus 111 ~f~~~~~p~i~~RGik~~l~-----------------P~-----~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 111 FFTRDGLPIAKTRGLQNVVD-----------------PL-----PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp EECTTSCEEESCCEETTTBS-----------------CC-----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EEcCCCCEEEEEccCccCCC-----------------CC-----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 99999999998776643322 21 12222234456678888999999886
No 449
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=79.51 E-value=5.5 Score=38.99 Aligned_cols=115 Identities=12% Similarity=0.045 Sum_probs=75.9
Q ss_pred CCCceeeeceeeeccceeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHH-HHhhCCCCCeEeecCCCCC
Q 002069 758 RHRNIVKFYGFCSHALHSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALL-YMHTNCFPPIVHRDISSKN 836 (973)
Q Consensus 758 ~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~-~LH~~~~~~i~H~Dlk~~N 836 (973)
.||++ -...-.+++...+.++.-+++.=...+ ...+...+++++.+|+.... +++.. +|--+.|+|
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i------~~~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~N 114 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAI------RKTTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPEN 114 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHH------HTSCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHH------HhcCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCce
Confidence 57877 333335566666666654333222222 34678899999999998887 66665 888999999
Q ss_pred eeecCCCceEEecccccccccCCCCcccccccccCcccccccccCCCCCccchHHHHHHHHHHHhCCCCCc
Q 002069 837 VLLNLEYEAHVSDFGISKFLKLGLSNRTELAGTFGYIAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRD 907 (973)
Q Consensus 837 ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~ 907 (973)
++++.++.+++.=.|+-..+ +|.. .+...=.-.+=+++..++.++..|+
T Consensus 115 L~f~~~~~p~i~hRGi~~~l-----------------pP~e-----~~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 115 LMFNRALEPFFLHVGVKESL-----------------PPDE-----WDDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp EEECTTCCEEESCCEETTTB-----------------SSCS-----CCHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred EEEeCCCcEEEEEcCCcccC-----------------CCCC-----CCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 99999999999877764332 2221 1111223456677778888888875
No 450
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=79.36 E-value=0.5 Score=32.81 Aligned_cols=22 Identities=23% Similarity=0.382 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHHhhheeeeeec
Q 002069 644 LLGTVALLISLIGLFFNFRQRK 665 (973)
Q Consensus 644 ~~~~l~~~~~~~~~~~~~~~~~ 665 (973)
+.|+++++++++.+++++|+|+
T Consensus 18 VgGv~~~~ii~~~~~~~~RRr~ 39 (44)
T 2ks1_B 18 VGALLLLLVVALGIGLFMRRRH 39 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTT
T ss_pred hHHHHHHHHHHHHHHHHhhhhH
Confidence 3344444444444444444443
No 451
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=77.51 E-value=0.54 Score=32.56 Aligned_cols=21 Identities=19% Similarity=0.221 Sum_probs=8.9
Q ss_pred HHHHHHHHHHHhhheeeeeec
Q 002069 645 LGTVALLISLIGLFFNFRQRK 665 (973)
Q Consensus 645 ~~~l~~~~~~~~~~~~~~~~~ 665 (973)
.|++++++++..+++++|+|+
T Consensus 18 gGv~~v~ii~~~~~~~~RRRr 38 (44)
T 2l2t_A 18 GGLFILVIVGLTFAVYVRRKS 38 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHhhhhh
Confidence 334444444444444444433
No 452
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=76.71 E-value=0.35 Score=54.37 Aligned_cols=63 Identities=6% Similarity=-0.101 Sum_probs=18.0
Q ss_pred cccccccCCCceeEEEEEcCC-CCEEEE------EEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeeceeee
Q 002069 704 DDEHCIGNGGQGSVYKAELPT-GEIVAV------KKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGFCS 770 (973)
Q Consensus 704 ~~~~~lg~G~~g~V~~~~~~~-~~~vav------K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~ 770 (973)
.+.+.+| ||+||+|.+.. ..+||| |..+..... .+....|.+|..+++..+|||+++.+++..
T Consensus 145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~-~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVS-EKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp CSTTTSS---BCCC---------CCBGGGC------------------------------------CBCCCEEE
T ss_pred cccccCC---chhhhcccccccCCchhhhhccCcccccccccc-ccccccccccccccccccccccCCCcceEE
Confidence 3456676 99999997753 367888 766543222 223457888999999999999999887653
No 453
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=62.64 E-value=2.1 Score=29.55 Aligned_cols=6 Identities=17% Similarity=0.650 Sum_probs=2.4
Q ss_pred hHHHHH
Q 002069 643 PLLGTV 648 (973)
Q Consensus 643 ~~~~~l 648 (973)
.++|++
T Consensus 17 ~vVGvl 22 (44)
T 2jwa_A 17 AVVGIL 22 (44)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 334433
No 454
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=61.85 E-value=2.7 Score=28.79 Aligned_cols=23 Identities=35% Similarity=0.212 Sum_probs=9.7
Q ss_pred eehhHHHHHHHHHHHHhhheeee
Q 002069 640 IVFPLLGTVALLISLIGLFFNFR 662 (973)
Q Consensus 640 ii~~~~~~l~~~~~~~~~~~~~~ 662 (973)
++.+++|+++++++++++++++|
T Consensus 16 ~~~vv~Gv~ll~~iv~~~~~~~r 38 (41)
T 2k9y_A 16 IGGVAVGVVLLLVLAGVGFFIHR 38 (41)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSSS
T ss_pred EeehhHHHHHHHHHHHHheeEee
Confidence 33344444444323343444444
No 455
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=56.95 E-value=13 Score=31.25 Aligned_cols=47 Identities=17% Similarity=0.099 Sum_probs=25.7
Q ss_pred ccccccccccCCCCcccEEecCCcccCCCCCccccccccccceecccc
Q 002069 203 TLSGSILYSFGNLTKLEILYLDVNALSGLIPNEIGNLKSLLALQLNYN 250 (973)
Q Consensus 203 ~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N 250 (973)
.++.+...+|.++.+|+.+.+-.+ ++.+...+|.++.+|+.+.+...
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 344455555666666666665543 34455556666666666655443
No 456
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=51.63 E-value=24 Score=29.58 Aligned_cols=40 Identities=13% Similarity=0.056 Sum_probs=16.9
Q ss_pred CCccccCCCCCCcEEcCCCCCCCcchhccCCCCCCcEEEcc
Q 002069 328 IPNEITNLRSLSDLQLSENTLNGSIPLALGNLTKLVSLDLS 368 (973)
Q Consensus 328 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 368 (973)
...+|.++++|+.+.|-.+ ++.+...+|.++.+|+.+.+.
T Consensus 12 ~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~ 51 (100)
T 2lz0_A 12 DKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILT 51 (100)
T ss_dssp CSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEEC
T ss_pred cHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEc
Confidence 3344444444444444332 222333444444444444443
No 457
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=50.96 E-value=2.3 Score=30.74 Aligned_cols=22 Identities=18% Similarity=0.751 Sum_probs=11.8
Q ss_pred EEEEeehhHHHHHHHHHHHHhh
Q 002069 636 IWIVIVFPLLGTVALLISLIGL 657 (973)
Q Consensus 636 ~~~~ii~~~~~~l~~~~~~~~~ 657 (973)
+|++++.+++|++.+.+++.++
T Consensus 9 ~WiIi~svl~GLLLL~Lii~~L 30 (54)
T 2l8s_A 9 LWVILLSAFAGLLLLMLLILAL 30 (54)
T ss_dssp THHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHH
Confidence 4666666666665555444333
No 458
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=44.32 E-value=96 Score=32.31 Aligned_cols=142 Identities=14% Similarity=0.063 Sum_probs=76.7
Q ss_pred CcccccccCCCceeEEEEEcCCCCEEEEEEcCCCCCcchhhHHHHHHHHHHhhcCCCCceeeecee--------------
Q 002069 703 FDDEHCIGNGGQGSVYKAELPTGEIVAVKKFHSPLPGEMACQQEFLNEGNALTKIRHRNIVKFYGF-------------- 768 (973)
Q Consensus 703 ~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~-------------- 768 (973)
+..++....|..| ||.+.. ++..|+||-.. ....+.+..++...-.+..|...-+.-.
T Consensus 71 v~~I~~s~~Gstg-vff~~t-d~~~~VVK~s~------~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~ 142 (342)
T 1cja_A 71 FKGIERSEKGTEG-LFFVET-ESGVFIVKRST------NIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAI 142 (342)
T ss_dssp EEEEEECCSTTSC-EEEEEE-SSCEEEEECCT------THHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHH
T ss_pred eeEEEeccCCCCC-eEEEEe-CCCEEEEeCcH------HHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHh
Confidence 3444555666655 554544 57889999441 1235666667666666777764332211
Q ss_pred ee--------ccceeEEEEEecCCCChHHHhccCccccCCCHHHHHHHHHHHHHHHHHHhhCCCC-CeEe-ecCCCCCee
Q 002069 769 CS--------HALHSFVVYEYLEMGSLAMILSNDAAAEEFGWTKRMNAIKGVADALLYMHTNCFP-PIVH-RDISSKNVL 838 (973)
Q Consensus 769 ~~--------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~-~i~H-~Dlk~~Nil 838 (973)
.. .....+++|||.+|..|.+.-... ....+..+....+. -+-+++++..+... +.+. .--.+.||+
T Consensus 143 ~~~~~~l~~l~~~~~~l~meyv~G~~L~e~~~~~-~~~~f~~~~~k~LG--~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL 219 (342)
T 1cja_A 143 DKSFRVITTLANQANILLMELVRGITLNKLTTTS-APEVLTKSTMQQLG--SLMALDVIVNNSDRLPIAWTNEGNLDNIM 219 (342)
T ss_dssp CSSSCHHHHHTTCSEEEEEECCCEEESTTCCSSS-HHHHSCHHHHHHHH--HHHHHHHHHTCCSSSCSSSCSCCCGGGEE
T ss_pred hhhhHHHHHhhcccceehhhhcCCCccccchhhh-hhhhcCHHHHHhhc--hhheehhhhcCCccCcccccCCCChhheE
Confidence 00 112456999999977665432211 11223333322211 12345566655331 1221 225788999
Q ss_pred ecCCCc-eEEeccccccc
Q 002069 839 LNLEYE-AHVSDFGISKF 855 (973)
Q Consensus 839 l~~~~~-~kl~Dfg~a~~ 855 (973)
++.++. +.++|-+.+..
T Consensus 220 ~~~~n~~~~~IDhn~af~ 237 (342)
T 1cja_A 220 LSERGATVVPIDSKIIPL 237 (342)
T ss_dssp EESBTTCEEECSCCCCCC
T ss_pred EeCCCCeEEEEcCCcccc
Confidence 977654 88999988853
No 459
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=42.23 E-value=5.3 Score=27.70 Aligned_cols=34 Identities=12% Similarity=-0.003 Sum_probs=23.3
Q ss_pred cceEEEEeehhHHHHHHHHHHHHhhheeeeeecc
Q 002069 633 LKKIWIVIVFPLLGTVALLISLIGLFFNFRQRKN 666 (973)
Q Consensus 633 ~~~~~~~ii~~~~~~l~~~~~~~~~~~~~~~~~~ 666 (973)
...|...++..+++++++++++.+++.-++++++
T Consensus 10 ~~~IA~gVVgGv~~~~ii~~~~~~~~RRr~~~~k 43 (44)
T 2ks1_B 10 IPSIATGMVGALLLLLVVALGIGLFMRRRHIVRK 43 (44)
T ss_dssp SSSSTHHHHHHHHHHHHHHHHHHHHHHTTTCCSC
T ss_pred cceEEeehhHHHHHHHHHHHHHHHHhhhhHhhcc
Confidence 3456666777777777777777777777776664
No 460
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=39.13 E-value=5.6 Score=25.93 Aligned_cols=23 Identities=17% Similarity=0.329 Sum_probs=9.1
Q ss_pred hhHHHHHHHHHHHHhhheeeeee
Q 002069 642 FPLLGTVALLISLIGLFFNFRQR 664 (973)
Q Consensus 642 ~~~~~~l~~~~~~~~~~~~~~~~ 664 (973)
+.++|++.++++...+.+++|+|
T Consensus 12 agVvglll~vii~l~~~~~iRRr 34 (35)
T 1iij_A 12 ATVVGVLLFLILVVVVGILIKRR 34 (35)
T ss_dssp HHHHHHHHHHHHTTTTTHHHHHC
T ss_pred HHHHHHHHHHHHHHHhheEEeec
Confidence 33444333333333333444433
No 461
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=36.83 E-value=2.6e+02 Score=31.80 Aligned_cols=84 Identities=18% Similarity=0.173 Sum_probs=48.1
Q ss_pred eeeceeeeccceeEEEEEecCCCChHHHhc----------cCcccc----CCCHHHHHHHHHHHHH--HHHHHhhCCCCC
Q 002069 763 VKFYGFCSHALHSFVVYEYLEMGSLAMILS----------NDAAAE----EFGWTKRMNAIKGVAD--ALLYMHTNCFPP 826 (973)
Q Consensus 763 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~----------~~~~~~----~~~~~~~~~i~~~i~~--~l~~LH~~~~~~ 826 (973)
++.|.+........ +.|++++.++.+.+. +..+.. ...+..+..++...|- .+.|+=.-
T Consensus 402 i~~Y~Vipls~~~G-lIE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YILGi---- 476 (614)
T 3ls8_A 402 LTPYKVLATSTKHG-FMQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILGV---- 476 (614)
T ss_dssp CCCCCEEESSSSEE-EEECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHTC----
T ss_pred eeccEEEEecCCCc-eEEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheeeec----
Confidence 34455554443333 347777655555443 221111 1124445555544332 34555433
Q ss_pred eEeecCCCCCeeecCCCceEEecccccc
Q 002069 827 IVHRDISSKNVLLNLEYEAHVSDFGISK 854 (973)
Q Consensus 827 i~H~Dlk~~Nill~~~~~~kl~Dfg~a~ 854 (973)
||=.++|||++.+|++.=+|||.+-
T Consensus 477 ---gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 477 ---GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp ---CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred ---cCCCCcceeEcCCCCEeeeehHHhh
Confidence 5778999999999999999999874
No 462
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=31.91 E-value=9.3 Score=27.78 Aligned_cols=23 Identities=35% Similarity=0.528 Sum_probs=12.1
Q ss_pred eEEEEeehhHHHHHHHHHHHHhh
Q 002069 635 KIWIVIVFPLLGTVALLISLIGL 657 (973)
Q Consensus 635 ~~~~~ii~~~~~~l~~~~~~~~~ 657 (973)
.+|++++.+++|++++.+++.++
T Consensus 11 p~wiIi~svl~GLllL~li~~~L 33 (54)
T 2knc_A 11 PIWWVLVGVLGGLLLLTILVLAM 33 (54)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHH
Confidence 34665665556655555444333
No 463
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=27.54 E-value=13 Score=25.53 Aligned_cols=23 Identities=35% Similarity=0.528 Sum_probs=12.1
Q ss_pred eEEEEeehhHHHHHHHHHHHHhh
Q 002069 635 KIWIVIVFPLLGTVALLISLIGL 657 (973)
Q Consensus 635 ~~~~~ii~~~~~~l~~~~~~~~~ 657 (973)
..|++++.++.|++.+.+++.++
T Consensus 9 p~wiIi~s~l~GLllL~li~~~L 31 (42)
T 2k1a_A 9 PIWWVLVGVLGGLLLLTILVLAM 31 (42)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHH
Confidence 34555665556655555443333
No 464
>2l6w_A Beta-type platelet-derived growth factor receptor; transmembrane helix, receptor tyrosine kinase, heptad repeat membrane protein; NMR {Homo sapiens}
Probab=32.87 E-value=13 Score=24.60 Aligned_cols=9 Identities=22% Similarity=0.360 Sum_probs=3.8
Q ss_pred Hhhheeeee
Q 002069 655 IGLFFNFRQ 663 (973)
Q Consensus 655 ~~~~~~~~~ 663 (973)
+++++.|++
T Consensus 26 IiLi~~w~q 34 (39)
T 2l6w_A 26 IILIMLWQK 34 (39)
Confidence 334444443
No 465
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=26.01 E-value=3.1e+02 Score=33.66 Aligned_cols=25 Identities=20% Similarity=0.227 Sum_probs=22.8
Q ss_pred ecCCCCCeeecCCCceEEecccccc
Q 002069 830 RDISSKNVLLNLEYEAHVSDFGISK 854 (973)
Q Consensus 830 ~Dlk~~Nill~~~~~~kl~Dfg~a~ 854 (973)
||=.++|||++.+|++.=+|||.+-
T Consensus 937 gDRH~~NILid~tG~v~HIDFG~~f 961 (1091)
T 3hhm_A 937 GDRHNSNIMVKDDGQLFHIDFGHFL 961 (1091)
T ss_dssp CCCCTTTEEEETTSCEEECCCCCCS
T ss_pred cCCCCcceEEeCCCCEEEEeehhhh
Confidence 5778999999999999999999874
No 466
>1zza_A Stannin, AG8_1; helix, membrane protein; NMR {Homo sapiens}
Probab=24.75 E-value=38 Score=25.67 Aligned_cols=17 Identities=24% Similarity=0.311 Sum_probs=7.7
Q ss_pred HHHHHHHHHhhheeeee
Q 002069 647 TVALLISLIGLFFNFRQ 663 (973)
Q Consensus 647 ~l~~~~~~~~~~~~~~~ 663 (973)
+.++-+++++||++.|-
T Consensus 24 vaalg~li~gcwcylrl 40 (90)
T 1zza_A 24 IAALGALILGCWCYLRL 40 (90)
T ss_dssp HHHHHHHHHHHHTTTSS
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33444445555544443
No 467
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=22.66 E-value=6.3e+02 Score=29.24 Aligned_cols=25 Identities=28% Similarity=0.255 Sum_probs=23.0
Q ss_pred ecCCCCCeeecCCCceEEecccccc
Q 002069 830 RDISSKNVLLNLEYEAHVSDFGISK 854 (973)
Q Consensus 830 ~Dlk~~Nill~~~~~~kl~Dfg~a~ 854 (973)
||=.++|||++.+|++.=+|||.+-
T Consensus 551 GDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 551 GDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp CCCCTTTEEECTTSCEEECCCCSCT
T ss_pred CCCCCcceEEeCCCCEEEEeehhhh
Confidence 6888999999999999999999874
Done!