BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002070
(973 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255545438|ref|XP_002513779.1| RNA binding protein, putative [Ricinus communis]
gi|223546865|gb|EEF48362.1| RNA binding protein, putative [Ricinus communis]
Length = 1099
Score = 1173 bits (3034), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 616/974 (63%), Positives = 734/974 (75%), Gaps = 48/974 (4%)
Query: 1 MRGGSAVEQSQPMVVDEVVD------KEKKKKNRRSNRRSNKNSSVNEIRGEATQTKNGY 54
MR G+ EQS +V++ D KEKKK RRSNRRS +NS N + G +++
Sbjct: 2 MRSGT--EQSSTVVIERTEDGVADKDKEKKKNKRRSNRRSKQNSP-NLVNGGGELSQSSR 58
Query: 55 KTKNLTSSMNCSSTKQQDLDLHPLSEQDPTGASTVTFSSMPTMHINEEESAESGSTQSQL 114
K+KN TSS+ C + Q D D + F+SMPTMHI+E Q +
Sbjct: 59 KSKNYTSSVGCFPSGQPDFDAY-------------AFNSMPTMHISE---------QVEH 96
Query: 115 LLATDLC--GSIISRSCPEPIANDSSCWAYTNKDDNPSHQSEARCKIFAPHWSMEAVNEA 172
LL +DL G S SCPEPIA C + + N R KIFA HWS+EA++EA
Sbjct: 97 LLPSDLSIGGQAFSNSCPEPIAG-GLCPFDSISNIN------TRGKIFASHWSIEAIDEA 149
Query: 173 LEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEGDFVLIKVDRLSLWA 232
LEKGDAFKA++ VNAHNRLEAYCKIEGV TDVLI+G+A QNRAVEGD V+IKVD L W
Sbjct: 150 LEKGDAFKAVFHVNAHNRLEAYCKIEGVSTDVLISGLAVQNRAVEGDMVVIKVDPLPCWT 209
Query: 233 KMKGF---SNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEY--SNCTLLSEKGIHHD 287
KMKG SN+ ++ ED N E + M S CKGK KV+V +++ S L +KGIH +
Sbjct: 210 KMKGSNGPSNSIALAEDCNSAVELSEMASGSCKGKIKVEVDHDFAESGSFSLPQKGIHSE 269
Query: 288 DDS-SSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPT 346
D S ++EA +QE+ GYN G HPS S+S+ SS Q++G NA+ RL MISS+PT
Sbjct: 270 DSSCATEAVHQELNGSTGYNIGIGDHPSASESSNFGSSMGQHEGANAVGRLCTMISSHPT 329
Query: 347 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 406
KRPTGRVV+IIERSPRRD I+GFLNV QWF + +KD+KKN++S S+ DREYIQL PT
Sbjct: 330 KRPTGRVVAIIERSPRRDAIIGFLNVKQWFYCREACKKDSKKNKNSSSISDREYIQLMPT 389
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 466
PK+PKM+VL LPDSIKKRLE GDAT+EMELVAA+ID W++ESP P AHV +FGRG
Sbjct: 390 DPKFPKMMVLASSLPDSIKKRLEGGDATVEMELVAAQIDNWDDESPSPHAHVSRIFGRGS 449
Query: 467 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 526
E+EPQ++AILYEN IC S FSPESLSC+PC WEVP EE+ RKDLRN CIFTIDPSTAT
Sbjct: 450 ELEPQLSAILYENTICYSDFSPESLSCIPCDSWEVPAEEIRRRKDLRNLCIFTIDPSTAT 509
Query: 527 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 586
DLDDALS+ERL +GI RVGVHIADVSYFVLP +ALD EAQ RSTSVY+L+ K+PMLP LL
Sbjct: 510 DLDDALSVERLPNGILRVGVHIADVSYFVLPDSALDKEAQARSTSVYLLRGKLPMLPPLL 569
Query: 587 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 646
SE +GSLNPGVDRLAF+IFW+LNS GDV DRWIGRTVI+SCCKLSY+HAQ+++DG E
Sbjct: 570 SENLGSLNPGVDRLAFTIFWELNSTGDVTDRWIGRTVIQSCCKLSYQHAQEMVDGVIREE 629
Query: 647 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYG 706
+ NT G PQLYG F+WSDV+RS+KSL E+SK L++KRF DGAL+LE+SK FLFDEYG
Sbjct: 630 ACNTFGNSLPQLYGPFDWSDVIRSVKSLNEISKTLREKRFNDGALQLESSKIGFLFDEYG 689
Query: 707 TPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFC 766
PYDSVL GR+D +FL EEFMLLAN+TAAEVI+RAFPDSALLRRHPAPNMRKLREFEAFC
Sbjct: 690 IPYDSVLCGRKDSDFLVEEFMLLANRTAAEVISRAFPDSALLRRHPAPNMRKLREFEAFC 749
Query: 767 SKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD-T 825
KHGLQLD+SSSG FHQSLE R KLKDD VL IL++YA+RPMQLA+YFCSG KD+
Sbjct: 750 CKHGLQLDSSSSGNFHQSLECIRGKLKDDSVLCGILMSYASRPMQLATYFCSGVMKDNMN 809
Query: 826 DWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGR 885
DWGHYALA +YTHFTSPLRRYPD++VHRTL AA+EAE+LY + RR+ K + V R
Sbjct: 810 DWGHYALAVALYTHFTSPLRRYPDIIVHRTLAAAIEAEELYMRSRRISCKAGMGDKVM-R 868
Query: 886 FLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKL 945
TGI++DKDAAES+EG+EALS AA K+ +PC + L NV +CNDRKLA R+VKDAC KL
Sbjct: 869 CFTGIYFDKDAAESVEGKEALSAAASKHRIPCTESLANVVAYCNDRKLASRHVKDACDKL 928
Query: 946 YMWILLKKKEVLFS 959
YMW LLK+KEVL S
Sbjct: 929 YMWALLKRKEVLLS 942
>gi|359492408|ref|XP_002284419.2| PREDICTED: DIS3-like exonuclease 2-like [Vitis vinifera]
Length = 1131
Score = 1140 bits (2948), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 574/932 (61%), Positives = 712/932 (76%), Gaps = 20/932 (2%)
Query: 41 NEIRGEATQT-KNGYKTKNLTSSMNCSSTKQQDLDLHPLSEQDPTGASTVTFSSMPTMHI 99
NE+RGE ++ NG + T+SM+ SS+KQ L+ PL AS V F+S+PTMH+
Sbjct: 43 NEMRGEVSECLANGSISNYDTTSMSYSSSKQGGLETDPLDNHGLHKASDVAFTSLPTMHL 102
Query: 100 NEEE-SAESGSTQSQLLLATDLCGSIISRSCPEPIANDSSCWAYTNKDDNPSHQSE--AR 156
NE+ AE GS +Q + +D G + S+SCP PI + S ++TNK+ +Q E A+
Sbjct: 103 NEQALHAEVGSMNNQHIFPSDPSGGMCSKSCPVPIDCEQSIQSFTNKNVLSPYQDEGCAQ 162
Query: 157 CKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAV 216
K F PHWS E VNEALEKG+ F+A +RVNA+NRLEAYC IEGV+TDVLI+G+A+QNRAV
Sbjct: 163 RKYFTPHWSTEVVNEALEKGNVFRASFRVNAYNRLEAYCTIEGVKTDVLISGLASQNRAV 222
Query: 217 EGDFVLIKVDRLSLWAKMKG---FSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEY 273
EGD V +KVD SLW++MKG F NN+ + ED NL ++ + D KGK KVDV+ ++
Sbjct: 223 EGDIVAVKVDPFSLWSRMKGSTVFPNNAGLTEDHNLLSDVTFV-GDSWKGKGKVDVNCDF 281
Query: 274 S---NCTLLSEKGIHHDDDSSSEAYNQEMIERE--GYNYINGHHPSTSDSTEKVSSSQQN 328
N LL +KG ++D+ A++ E I +E G+N++NGHHP + VS +
Sbjct: 282 GHERNHFLLHDKGFPYEDN----AFSAENISQEPMGHNHVNGHHPPVFGPSH-VSCFGER 336
Query: 329 DGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKK 388
M+++E++ A I+S+P+KRPTG VV+IIERSPRR +VGFL+V QW + + RK K
Sbjct: 337 SNMDSLEKICAAINSFPSKRPTGSVVAIIERSPRRVAVVGFLSVKQWLSSRVLHRKGTKM 396
Query: 389 NRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWN 448
N++ LS+ D EYIQLTPT PK+PKMVV VK L D IKKRLE+GDA++EMELVAA+I +W
Sbjct: 397 NKTYLSLSDSEYIQLTPTDPKFPKMVVPVKGLSDCIKKRLEDGDASMEMELVAAQISDWG 456
Query: 449 EESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLS 508
EES P AHV+H+FGRGGE+EP+I AIL+ENAI S FSPESLSCLP +PW+VPQEE+
Sbjct: 457 EESSLPLAHVMHIFGRGGEIEPRIAAILFENAIRPSEFSPESLSCLPHIPWKVPQEEIER 516
Query: 509 RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVR 568
R+DLRN CIFTIDPSTATDLDDALS+E+LS G RVGVHIAD SYFVLP LD EAQ R
Sbjct: 517 RRDLRNLCIFTIDPSTATDLDDALSVEKLSGGNFRVGVHIADASYFVLPDGVLDREAQSR 576
Query: 569 STSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCC 628
STSVY+LQ K+PMLP LLSE +GSL PGVDRLAFSIFWD+N AGDVVDRWIGRTVI+SCC
Sbjct: 577 STSVYLLQHKLPMLPPLLSENLGSLIPGVDRLAFSIFWDINLAGDVVDRWIGRTVIQSCC 636
Query: 629 KLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTD 688
KLSYEHAQ IIDG FDVE S LG PQL+G F+ +V+RSIK LY +SK L+ RF D
Sbjct: 637 KLSYEHAQGIIDGMFDVEGSKILGNDCPQLHGHFKLPEVIRSIKYLYAISKTLRANRFND 696
Query: 689 GALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALL 748
GAL L+ +K + LFDE+G PYDS S R+D N L EEFMLLANKTAAE+I+RAFPD+ALL
Sbjct: 697 GALLLDGAKVILLFDEHGVPYDSTFSVRKDSNSLVEEFMLLANKTAAEIISRAFPDNALL 756
Query: 749 RRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATR 808
RRHP PN+RKLREFEAFCSKHGL+LDTSSSGQF+ SLEQ REKLK+D VLFDIL++YA+R
Sbjct: 757 RRHPEPNLRKLREFEAFCSKHGLELDTSSSGQFNHSLEQIREKLKNDSVLFDILLSYASR 816
Query: 809 PMQLASYFCSGDFKDD-TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYW 867
PMQLA+YFCSGD KD+ +W HYALA P+YTHFTSPLRRYPD++VHRTL AA+EAE+LY
Sbjct: 817 PMQLATYFCSGDLKDNKNEWSHYALAVPLYTHFTSPLRRYPDIIVHRTLAAAIEAEELYL 876
Query: 868 KHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATH 927
KH + K + E +R R TGI +DK+AAES+EG++ALSVAA K+ +PC +IL +V +
Sbjct: 877 KHGAKIQKVKNGEEMR-RCFTGIHFDKNAAESVEGQKALSVAASKHRLPCTEILADVVAY 935
Query: 928 CNDRKLACRNVKDACVKLYMWILLKKKEVLFS 959
CN+RKLA R+ KD C +LYMW+LLKKKEVL S
Sbjct: 936 CNERKLASRHAKDGCERLYMWVLLKKKEVLLS 967
>gi|224066863|ref|XP_002302251.1| predicted protein [Populus trichocarpa]
gi|222843977|gb|EEE81524.1| predicted protein [Populus trichocarpa]
Length = 860
Score = 1135 bits (2936), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 564/879 (64%), Positives = 688/879 (78%), Gaps = 44/879 (5%)
Query: 87 STVTFSSMPTMHINEEESAESGSTQSQLLLATDLCGSIISRSCPEPIANDSSCWAYTNKD 146
S + +SSMPTMH+NE Q + L+ +DL GS++++SC EPI
Sbjct: 1 SRIAYSSMPTMHVNE---------QQEDLVLSDLDGSMLAKSCTEPIVGGGPHGKLL--- 48
Query: 147 DNPSHQSE--ARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDV 204
P HQ E A+ KIFAP+WS E VNEALEKGD FK L+RVNAHNRLEAYCKIEGV TDV
Sbjct: 49 --PFHQFEGQAQSKIFAPYWSTETVNEALEKGDVFKVLFRVNAHNRLEAYCKIEGVPTDV 106
Query: 205 LITGIAAQNRAVEGDFVLIKVDRLSLWAKMKG--FSNNSSIVEDSNLPTEANGMHSDICK 262
LI+GIAAQNRA++GD V+I+VD LS W KMKG +N+ EDSNL EANG +D
Sbjct: 107 LISGIAAQNRAMDGDVVVIEVDPLSFWTKMKGSNVPSNNPTAEDSNLHLEANGKCAD--- 163
Query: 263 GKSKVDVSYEYSNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKV 322
+ N +L+ +KGIH+D+ + + + NY+NG+H S S+S+ V
Sbjct: 164 ----------FGN-SLVPQKGIHYDETACAGEVVHD-------NYVNGYHQSASESSLAV 205
Query: 323 SSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGS 382
S+ Q++ N++ R+ AM+S YP+KRPTGRVV+I+E+SPRRD IVGFLNV QWF Y+ G
Sbjct: 206 PSTGQDEVSNSVGRICAMLSLYPSKRPTGRVVAIVEKSPRRDVIVGFLNVKQWFYYREGC 265
Query: 383 RKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAA 442
R++AKKN+SSLS+ +REYI++ PT P++PK++VLV LPD IKKRLE DAT+EMELVAA
Sbjct: 266 RQNAKKNKSSLSISNREYIEMMPTDPRFPKLMVLVSVLPDCIKKRLENEDATVEMELVAA 325
Query: 443 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVP 502
+ID W+++SPFP+AHV +FGRG E+E QINAIL+ENAICCS FSPESLSCLP WEVP
Sbjct: 326 QIDNWSDKSPFPEAHVSCIFGRGSEMESQINAILHENAICCSKFSPESLSCLPSNTWEVP 385
Query: 503 QEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALD 562
++E+ +RKD+RN CIFTIDPS+ATDLDDALS+++L +G+ RVGVHIADVSYFVLP TALD
Sbjct: 386 KDEIENRKDIRNLCIFTIDPSSATDLDDALSVQKLPNGLVRVGVHIADVSYFVLPDTALD 445
Query: 563 IEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRT 622
+EAQ RSTSVYML+RKIPMLP LLSE +GSLNPGVDRLAFSIFWD NS+G+VVDRWI RT
Sbjct: 446 MEAQFRSTSVYMLRRKIPMLPPLLSENLGSLNPGVDRLAFSIFWDFNSSGNVVDRWIDRT 505
Query: 623 VIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILK 682
VI+SCCKLSYEHAQ I+DG D E+ NT G+ PQL+G FEW+DV+ S+ L+E+SK L+
Sbjct: 506 VIQSCCKLSYEHAQGIVDGMIDTETCNTFGDSLPQLHGHFEWADVIGSVVCLHEISKTLR 565
Query: 683 DKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAF 742
+KRF +GALRLE+SK VFLFDEYG PYDS L R+D NF+ EEFMLLAN TAAE+I+RAF
Sbjct: 566 EKRFDNGALRLESSKIVFLFDEYGIPYDSSLCERKDSNFIVEEFMLLANFTAAEIISRAF 625
Query: 743 PDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDIL 802
PDSALLRRHP PNMRKLREFEAFC KHGL+LDT SSG F QSLE+ +EKLKDD LF+IL
Sbjct: 626 PDSALLRRHPEPNMRKLREFEAFCCKHGLELDT-SSGNFQQSLERIKEKLKDDPELFNIL 684
Query: 803 INYATRPMQLASYFCSGDFKDD-TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 861
INYA+RPMQLA+YFCSGD KD+ DWGHYALA P+YTHFTSPLRRYPD+VVHRTL AA+E
Sbjct: 685 INYASRPMQLATYFCSGDLKDNMNDWGHYALAVPLYTHFTSPLRRYPDIVVHRTLAAAIE 744
Query: 862 AEKLYWKHRRMLPKNNHREGVRG-RFLTGIFYDKDAAESLEGREALSVAALKYGVPCADI 920
AE+LY RRM K R G G R TGI + KD AES EG+EALS AALK+ +PC ++
Sbjct: 745 AEQLYMMDRRMSLKA--RPGEEGTRCFTGICFCKDVAESAEGKEALSAAALKHRIPCPEL 802
Query: 921 LVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLFS 959
L +VA +CN+RKLA R+VKDAC KLYMW+ +K+KEVL S
Sbjct: 803 LSHVAAYCNERKLASRHVKDACDKLYMWVSVKRKEVLLS 841
>gi|356550838|ref|XP_003543790.1| PREDICTED: DIS3-like exonuclease 2-like [Glycine max]
Length = 1184
Score = 1088 bits (2815), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 567/962 (58%), Positives = 699/962 (72%), Gaps = 60/962 (6%)
Query: 33 RSNKNSSVNEIRGEATQT-KNGYKTK---NLTSSMN----CSSTKQQDLDLHPLSEQDPT 84
R + S VNE +G + + K G T +L +S+N CSS +EQ +
Sbjct: 91 RGSCASEVNEAQGLSPDSGKIGTPTHASPSLGNSLNQVNVCSS-----------NEQGLS 139
Query: 85 GASTVTFSSMPTMHINEEESAESGSTQSQLLLATDLCGSII-SRSCPEPIANDSSCWAYT 143
AS V F S+P MHINE+ E G L +CG I S S EP S
Sbjct: 140 KASNVAFISIPPMHINEQ--VEPGD-----LRILPMCGGGIDSNSFSEPTGCRGSSGINK 192
Query: 144 NKDDNPSHQSE--ARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQ 201
NKD P Q + K F+PHWS+EAV + LE+GD FKAL+ VNAHNRLEAYCKI+G+
Sbjct: 193 NKDSVPCGQIGLCGQEKYFSPHWSVEAVEKELEEGDVFKALFHVNAHNRLEAYCKIDGMP 252
Query: 202 TDVLITGIAAQNRAVEGDFVLIKVDRLSLWAKMKGFS---NNSSIVEDSNLPTEANGMHS 258
TDV I GI AQNRAVEGD V +K D L LW KMKG + NN++ E NL TE +
Sbjct: 253 TDVFIGGIPAQNRAVEGDVVAVKFDPLPLWTKMKGPNGSCNNTATPEGCNL-TEDKEVGG 311
Query: 259 DICKGKSKVDVSYEYSN-------------------CTLLSEKGIHHDDDSSSEAYNQ-E 298
+ICKGK+KVD YE ++ +E + +DD +S + N +
Sbjct: 312 NICKGKAKVDAEYESAHGRSYPGQNKEDADQNSLYKSYPFTETTMVYDDITSRGSTNHLD 371
Query: 299 MIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIE 358
+ ++ INGHH + +S + S S Q+ NA+E++ +++S+P+KRPTGRVV+IIE
Sbjct: 372 LHGMANHDSINGHHCAAPNSLKINSCSGQS---NAVEKMCLLVNSFPSKRPTGRVVAIIE 428
Query: 359 RSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVK 418
RSPRR+GIVG +NV QW +++ S+KD KKN++ +S + EYIQL PT PK+P M++LV+
Sbjct: 429 RSPRREGIVGHINVKQWVSFRDTSKKDVKKNKNLIS--EHEYIQLIPTDPKFPNMMLLVR 486
Query: 419 DLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYE 478
LP IKKR++ GD TI+M+LVA +ID+W EESPFP+AH+L VFG+GGEV+ Q++AIL++
Sbjct: 487 KLPKCIKKRMKSGDVTIQMDLVAVQIDDWVEESPFPEAHILRVFGQGGEVQTQLDAILFQ 546
Query: 479 NAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLS 538
NAIC S FSPE+LSCLPCVPWE+P +E+ SR DLRN CIFTIDPSTATDLDDALSIE+L
Sbjct: 547 NAICLSEFSPEALSCLPCVPWEIPLKEIQSRIDLRNLCIFTIDPSTATDLDDALSIEKLP 606
Query: 539 DGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVD 598
+G RVGVHIADVSYFVLP TALD EA+ RSTSVYMLQRK+PMLP LLSE +GSL+PGVD
Sbjct: 607 NGNYRVGVHIADVSYFVLPDTALDNEAKFRSTSVYMLQRKLPMLPALLSENIGSLSPGVD 666
Query: 599 RLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQL 658
RLA S+ D+N AGDVVDRWIGRTVI+SCCKLSYEHAQDIID FD E SN + +G+P++
Sbjct: 667 RLAVSMLLDINVAGDVVDRWIGRTVIQSCCKLSYEHAQDIIDKAFDFEGSNFIEDGYPRV 726
Query: 659 YGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGRED 718
YG FEW DV+ S++SLYE+S +LK KRFTDGALRLEN K V LFDE G PYDS LS R++
Sbjct: 727 YGHFEWPDVIMSLESLYEISNVLKQKRFTDGALRLENPKVVILFDENGVPYDSRLSERKE 786
Query: 719 LNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSS 778
NFL EE+MLLAN+ AAEVI RA+PD ALLRRHP PNMRKLREF AFC KHGL+L+TSSS
Sbjct: 787 SNFLVEEYMLLANRIAAEVICRAYPDGALLRRHPEPNMRKLREFMAFCQKHGLELNTSSS 846
Query: 779 GQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKD-DTDWGHYALAFPVY 837
G+ H SLEQ REKLK D VL++ILI+YATRPMQLASYFCSGD KD + +WGHYALA P Y
Sbjct: 847 GELHWSLEQIREKLKGDPVLYNILISYATRPMQLASYFCSGDLKDSENEWGHYALAVPFY 906
Query: 838 THFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAA 897
THFTSPLRRYPD++VHRTL A +EAE+LY KH++ L + + V+ R TGI +DK AA
Sbjct: 907 THFTSPLRRYPDIIVHRTLLATIEAEELYMKHQKAL-QGSKEVKVQKRCFTGINFDKSAA 965
Query: 898 ESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVL 957
ES EGREALS AA+K+ VPCA+ L ++AT+CN RKLA RNVKDAC KLY+W LLKKKEVL
Sbjct: 966 ESTEGREALSAAAVKHSVPCAETLADIATYCNGRKLASRNVKDACDKLYIWFLLKKKEVL 1025
Query: 958 FS 959
S
Sbjct: 1026 LS 1027
>gi|356551558|ref|XP_003544141.1| PREDICTED: DIS3-like exonuclease 2-like [Glycine max]
Length = 1133
Score = 1086 bits (2809), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 565/949 (59%), Positives = 697/949 (73%), Gaps = 43/949 (4%)
Query: 38 SSVNEIRGEATQTKNGYKTKNLTSSMNCSSTKQQDLDLHPLSEQDPTGASTVTFSSMPTM 97
S VNE +G + ++ + + S SS KQ +++ +EQ + +S V F+SMP M
Sbjct: 43 SEVNEAQGVSPESGKIGTPTHASPSFG-SSLKQ--VNVCSPNEQGLSKSSNVAFNSMPPM 99
Query: 98 HINEEESAESGSTQSQLLLATDLCGSIISRSCPEPIANDSSCWAYTNKDDNPSHQS--EA 155
HINE+ E G L + G I S+S EP S NKD P Q
Sbjct: 100 HINEQ--VEPG----DLRIVPMYDGGIDSKSFSEPTGCRGSSVINKNKDSVPCGQIGLSG 153
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
+ F+PHWS+EAV +ALEKGD FKAL VNAHNRLEAYCKI+G+ TDV I GI AQNRA
Sbjct: 154 QKNYFSPHWSVEAVEKALEKGDIFKALLHVNAHNRLEAYCKIDGMSTDVFIGGIPAQNRA 213
Query: 216 VEGDFVLIKVDRLSLWAKMKGFS---NNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYE 272
V+GD V +K D L LW KMKG + NN++ +E NL TE + +IC GK+KV YE
Sbjct: 214 VQGDIVAVKFDPLPLWTKMKGPNGSCNNTATLEGCNLLTEDKEVGGNICNGKAKVGAEYE 273
Query: 273 YSNCTL-------------------LSEKGIHHDDDSSSEAYNQ-EMIEREGYNYINGHH 312
++C L EK + +DD +S + N ++ ++ INGHH
Sbjct: 274 SAHCRSYPGQNKEDADQNSSYRSYPLPEKTMVYDDITSQGSTNHLDLHGMASHDSINGHH 333
Query: 313 PSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNV 372
+ DS + S S Q+ NA+E++ +++S+P+KRPTGRVV+I+ERSPRR+GIVG +NV
Sbjct: 334 CAAPDSIKNNSCSGQS---NALEKMCLLVNSFPSKRPTGRVVAIMERSPRREGIVGHINV 390
Query: 373 NQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGD 432
QW +++ +KD KKN++ +S + EYIQLTPT PK+P M++LV+ LP+ IKKR++ GD
Sbjct: 391 KQWVSFRDTGKKDLKKNKNLIS--EHEYIQLTPTDPKFPNMMLLVRKLPNCIKKRMKSGD 448
Query: 433 ATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLS 492
TIEM+LVAA+ID+W EESPFP+AH+L VFGRGGEV+ Q++AIL++NAIC S F PE+LS
Sbjct: 449 VTIEMDLVAAQIDDWVEESPFPEAHILRVFGRGGEVQTQLDAILFQNAICLSEFLPEALS 508
Query: 493 CLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVS 552
CLPCVPWEVP +E+ SR DLRN CIFTIDPSTATDLDDALSIE L +G RVGVHIADVS
Sbjct: 509 CLPCVPWEVPLKEIQSRIDLRNLCIFTIDPSTATDLDDALSIEELPNGNYRVGVHIADVS 568
Query: 553 YFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAG 612
YFVLP T LD EAQ RSTSVYMLQRK+PMLP LLSE +GSL+PG DRLA S+ D+N AG
Sbjct: 569 YFVLPDTPLDSEAQFRSTSVYMLQRKLPMLPALLSENIGSLSPGGDRLAVSMLLDINLAG 628
Query: 613 DVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIK 672
DVVDRWIGRTVI SCCKLSYEHAQDIID FD E SN +G+P++YG FEW DV++S+K
Sbjct: 629 DVVDRWIGRTVIHSCCKLSYEHAQDIIDKAFDFEGSNFSEDGYPRVYGHFEWPDVIKSLK 688
Query: 673 SLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANK 732
SLYE+S +LK KRFTDGALRLEN K V LFDE G PYDS+LS R++ NFL EE+MLLAN+
Sbjct: 689 SLYEISNVLKQKRFTDGALRLENPKVVILFDENGVPYDSMLSERKESNFLVEEYMLLANR 748
Query: 733 TAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKL 792
AAEVI RA+PD ALLRRHP PNMRKLREF AFC KHGL+L+TSSSGQFH SLEQ REKL
Sbjct: 749 IAAEVICRAYPDGALLRRHPEPNMRKLREFMAFCQKHGLELNTSSSGQFHWSLEQIREKL 808
Query: 793 KDDYVLFDILINYATRPMQLASYFCSGDFKD-DTDWGHYALAFPVYTHFTSPLRRYPDLV 851
K D VL++ILI++ATRPMQLASYFCSGD KD + +WGHYALA P YTHFTSPLRRYPD++
Sbjct: 809 KGDPVLYNILISFATRPMQLASYFCSGDLKDSENEWGHYALAVPFYTHFTSPLRRYPDII 868
Query: 852 VHRTLNAALEAEKLYWKHRRMLPKNNHRE-GVRGRFLTGIFYDKDAAESLEGREALSVAA 910
VHRTL A +EAE+LY KH++ L ++E V+ R T I +DK AAES+EGREALS AA
Sbjct: 869 VHRTLLATIEAEELYMKHQKAL--QGYKEVKVQKRCFTDISFDKIAAESMEGREALSAAA 926
Query: 911 LKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLFS 959
+K+ VPCA+ L ++A +CN+RKLA RNVKDAC KLY+W LLKKKEVL S
Sbjct: 927 VKHSVPCAETLADIAAYCNERKLASRNVKDACDKLYIWFLLKKKEVLLS 975
>gi|224082254|ref|XP_002306619.1| predicted protein [Populus trichocarpa]
gi|222856068|gb|EEE93615.1| predicted protein [Populus trichocarpa]
Length = 944
Score = 1085 bits (2806), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 533/812 (65%), Positives = 648/812 (79%), Gaps = 21/812 (2%)
Query: 154 EARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQN 213
+A+ KIFAP+WSME VNEALEKGD FK L+RVNAHNRLEAYCKIEGV TD+LI+GIA QN
Sbjct: 2 QAQSKIFAPYWSMETVNEALEKGDVFKVLFRVNAHNRLEAYCKIEGVPTDLLISGIAVQN 61
Query: 214 RAVEGDFVLIKVDRLSLWAKMKGF---SNNSSIVEDSNLPTEANGMHSDICKGKSKVDVS 270
RAVEGD V+I+VD LS W KMKG SNN S EDSNL EANG +GK K+++
Sbjct: 62 RAVEGDVVVIEVDPLSFWTKMKGSNEPSNNLSTAEDSNLHLEANGKAGGSRQGKIKLNMD 121
Query: 271 YEYSNC--TLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQN 328
+Y++ +L+ KG ++ S GYNY NG+H S SDS+ S Q+
Sbjct: 122 CKYADFGNSLVPHKGFYYGYSSL------------GYNYANGYHQSPSDSSHVAHSMGQS 169
Query: 329 DGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKK 388
+ +N + R+ +MISSYP+KRPT RVV+IIE+SPRRD I+GFLNV QWF YK G +KDAKK
Sbjct: 170 EVLNGVGRMCSMISSYPSKRPTCRVVAIIEKSPRRDAIIGFLNVKQWFYYKEGCKKDAKK 229
Query: 389 NRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWN 448
N+S S+ + EYI++ P P++PK++VLV LP+ IKKRLE+ D T+EME+VAA+ID+W+
Sbjct: 230 NKSLPSISNCEYIEIMPADPRFPKLMVLVSSLPNCIKKRLEDEDETVEMEMVAAQIDKWS 289
Query: 449 EESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLS 508
+ESPFP+AHV ++FGRG E+E QINAIL+ENA+CCS FSPESLSCLP WEVP+EE +
Sbjct: 290 DESPFPEAHVSYIFGRGSEMESQINAILHENAVCCSEFSPESLSCLPSNTWEVPEEEFQN 349
Query: 509 RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVR 568
R+DLRN CIFTIDPS ATDLDDALS++RL +G+ RVGVHI DVSYFVLP TALD EAQ+R
Sbjct: 350 RRDLRNLCIFTIDPSIATDLDDALSVQRLPNGLVRVGVHITDVSYFVLPDTALDKEAQIR 409
Query: 569 STSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCC 628
STSVYM QRKIPMLP LLS++VGSLNPGVDRLAFSIFW+LNS+G+VVDRWIGRTVIRSCC
Sbjct: 410 STSVYMSQRKIPMLPPLLSKDVGSLNPGVDRLAFSIFWNLNSSGNVVDRWIGRTVIRSCC 469
Query: 629 KLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTD 688
KLSYEHA++I DG D E+ N + PQL+G FEW+DV+ SIK L+E+SK L++KRF D
Sbjct: 470 KLSYEHAREIFDGMIDAETHNNFRD-LPQLHGHFEWADVIGSIKCLHEISKTLREKRFDD 528
Query: 689 GALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALL 748
GAL+LE+ K VF FD++G PYD+ L GR+D NFL EEFMLLAN+TAAE+I+RAFPD+ALL
Sbjct: 529 GALQLESCKIVFSFDKHGVPYDNTLCGRKDSNFLVEEFMLLANRTAAEIISRAFPDNALL 588
Query: 749 RRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATR 808
RRHP PN++KL+EFEAFC KHGL+LDT SSG F +SLE +EKLKDD VL +ILINYA+R
Sbjct: 589 RRHPEPNIQKLKEFEAFCCKHGLELDT-SSGNFRRSLEHIKEKLKDDSVLLNILINYASR 647
Query: 809 PMQLASYFCSGDFKDD-TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYW 867
PMQLA+YFCSGD KD+ DWGHYALA P+YTHFTSPLRRYPD+VVHRTL AA+EAE+LY
Sbjct: 648 PMQLATYFCSGDLKDNMNDWGHYALAVPLYTHFTSPLRRYPDIVVHRTLAAAIEAEQLYM 707
Query: 868 KHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATH 927
+RRM K E V R TGI + KDAA S EGREALS AALK+ +PC +L +VA +
Sbjct: 708 MNRRMSHKVRPGEEVT-RCFTGICFLKDAAGSSEGREALSAAALKHRIPCTKLLTDVAAY 766
Query: 928 CNDRKLACRNVKDACVKLYMWILLKKKEVLFS 959
N+RKLA R+VKDAC KLYMW+ +K+KEVL S
Sbjct: 767 SNERKLASRHVKDACDKLYMWVSVKRKEVLLS 798
>gi|449446430|ref|XP_004140974.1| PREDICTED: DIS3-like exonuclease 2-like [Cucumis sativus]
Length = 1125
Score = 1025 bits (2649), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 532/931 (57%), Positives = 670/931 (71%), Gaps = 15/931 (1%)
Query: 38 SSVNEIRGEATQ-TKNGYKTKNLTSSMNCSSTKQQDLDLHPLSEQDPTGASTVTFSSMPT 96
+SVN I GEA++ +NG NLTS N SS QQ+ + E T + FSS+P
Sbjct: 43 TSVNGILGEASECMENGRIDANLTSPSNYSSLTQQENHSNQQIEHGLTRGDKIGFSSLPP 102
Query: 97 MHINEE-ESAESGSTQSQLLLATDLCGSIISRSCPEPIANDSSCWAYTNKDDNPSHQSE- 154
+HINE+ E + S + +Q ++D G +++SCPE IA+ N+ P+ ++
Sbjct: 103 LHINEQAELSASHNLMNQNHHSSD-AGGRVTKSCPEQIASGRYSGISLNQHSPPADVTDN 161
Query: 155 -ARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQN 213
+ K F HWS++ VNE L+KG FKAL+RVNAHNRLEAYCKI+G+ DVLI GIA+QN
Sbjct: 162 NTQRKYFPSHWSVDDVNEGLQKGGIFKALFRVNAHNRLEAYCKIDGLPIDVLINGIASQN 221
Query: 214 RAVEGDFVLIKVDRLSLWAKMKGFS---NNSSIVEDSNLPTEANGMHSDICKGKSKVD-- 268
RAVEGD V IK+D + W KMKG S NN +ED+NLP E + CKGK+KVD
Sbjct: 222 RAVEGDIVAIKLDPFTSWTKMKGTSEAHNNMHSMEDANLPAELTEKNDHNCKGKNKVDAD 281
Query: 269 VSYEYSNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQN 328
V + T L +K +D ++ Y + + S + ++ SS Q+
Sbjct: 282 VKSDSFRSTSLPDKRCCSEDKVLDGVACDVLLS--NYEQCDINELSVVNPSQAHHSSNQD 339
Query: 329 DGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKK 388
D AI R+ A+I+ YP KRPTGRVV+I+E+S R+ +VG LNV ++ +++ K++ K
Sbjct: 340 DVSKAIGRICALINLYPAKRPTGRVVTILEKSRLRENVVGHLNVKKFLSFQEFYVKESTK 399
Query: 389 NRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWN 448
+ S S + Y+QL P ++P M+VL DLP+ IKKRL+ GD T+E ELVAARI EW
Sbjct: 400 SCLSPS-QNCGYVQLMPNDARFPIMMVLAGDLPNCIKKRLDNGDVTVENELVAARIYEWV 458
Query: 449 EESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLS 508
+ES P+AHVLHV GRG EVE I+AIL+ENAI FS +SLSC+P PW++P EEL
Sbjct: 459 KESSSPRAHVLHVLGRGNEVESHIDAILFENAIRTCEFSQDSLSCVPQTPWKIPPEELQC 518
Query: 509 RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVR 568
R+D+RN CIFTIDPS+A+DLDDALS++RL++GI RVG+HIADVSYFVLP TALD EAQ+R
Sbjct: 519 RRDIRNLCIFTIDPSSASDLDDALSVQRLANGIFRVGIHIADVSYFVLPDTALDKEAQIR 578
Query: 569 STSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCC 628
STSVY+LQRKIPMLP LLSE +GSLNPGVDRLAFS+F D+NS GDV D WI RTVI CC
Sbjct: 579 STSVYLLQRKIPMLPPLLSESIGSLNPGVDRLAFSLFLDINSCGDVKDFWIERTVICCCC 638
Query: 629 KLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTD 688
KLSYEHAQDIIDG D +SS G PQL+GQF W DV+ S+K L+E+SK +K+KRF +
Sbjct: 639 KLSYEHAQDIIDGLIDSDSSELFGNNCPQLHGQFTWHDVISSVKLLHEISKTVKEKRFRN 698
Query: 689 GALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALL 748
GALRLENSK ++L+DEYG PYDS+ ++D NFL EEFMLLAN+T AEVI+R FPDSALL
Sbjct: 699 GALRLENSKLIYLYDEYGIPYDSMFYEQKDSNFLVEEFMLLANRTVAEVISRTFPDSALL 758
Query: 749 RRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATR 808
RRHP P +RKLREFE FCSKHG +LDTSSS F QSLEQ R +L+DD +LFDILI+YATR
Sbjct: 759 RRHPEPMLRKLREFETFCSKHGFELDTSSSVHFQQSLEQIRIELQDDPLLFDILISYATR 818
Query: 809 PMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWK 868
PMQLA+YFCSG+ KD HYALA P+YTHFTSPLRRYPD+VVHRTL AA+EAEK+Y K
Sbjct: 819 PMQLATYFCSGELKDGETRSHYALAVPLYTHFTSPLRRYPDIVVHRTLAAAIEAEKMYLK 878
Query: 869 HRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHC 928
H+ ++ K N E R TGI++DKDAA+SLEGREALS AALK+GVPC+ +L++VA HC
Sbjct: 879 HKGVIQKVNSNE--ETRCFTGIYFDKDAADSLEGREALSSAALKHGVPCSKLLLDVALHC 936
Query: 929 NDRKLACRNVKDACVKLYMWILLKKKEVLFS 959
NDRKLA ++V D KLYMW LLKKK++LFS
Sbjct: 937 NDRKLASKHVADGIEKLYMWALLKKKKILFS 967
>gi|302141847|emb|CBI19050.3| unnamed protein product [Vitis vinifera]
Length = 1007
Score = 1020 bits (2637), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 529/927 (57%), Positives = 652/927 (70%), Gaps = 109/927 (11%)
Query: 41 NEIRGEATQT-KNGYKTKNLTSSMNCSSTKQQDLDLHPLSEQDPTGASTVTFSSMPTMHI 99
NE+RGE ++ NG + T+SM+ SS+KQ L+ PL AS V F+S+PTMH+
Sbjct: 43 NEMRGEVSECLANGSISNYDTTSMSYSSSKQGGLETDPLDNHGLHKASDVAFTSLPTMHL 102
Query: 100 NEEE-SAESGSTQSQLLLATDLCGSIISRSCPEPIANDSSCWAYTNKDDNPSHQSE--AR 156
NE+ AE GS +Q + +D G + S+SCP PI + S ++TNK+ +Q E A+
Sbjct: 103 NEQALHAEVGSMNNQHIFPSDPSGGMCSKSCPVPIDCEQSIQSFTNKNVLSPYQDEGCAQ 162
Query: 157 CKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAV 216
K F PHWS E VNEALEKG+ F+A +RVNA+NRLEAYC IEGV+TDVLI+G+A+QNRAV
Sbjct: 163 RKYFTPHWSTEVVNEALEKGNVFRASFRVNAYNRLEAYCTIEGVKTDVLISGLASQNRAV 222
Query: 217 EGDFVLIKVDRLSLWAKMKG---FSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEY 273
EGD V +KVD SLW++MKG F NN++
Sbjct: 223 EGDIVAVKVDPFSLWSRMKGSTVFPNNAA------------------------------- 251
Query: 274 SNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNA 333
E +QE + G+N++NGHHP + VS + M++
Sbjct: 252 -------------------ENISQEPM---GHNHVNGHHPPVFGPSH-VSCFGERSNMDS 288
Query: 334 IERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSL 393
+E++ A I+S+P+KRPTG VV+IIERSPRR +VGFL+V QW + + RK K N++ L
Sbjct: 289 LEKICAAINSFPSKRPTGSVVAIIERSPRRVAVVGFLSVKQWLSSRVLHRKGTKMNKTYL 348
Query: 394 SVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPF 453
S+ D EYIQLTPT PK+PKMVV VK L D IKKRLE+GDA++EMELVAA+I +W EES
Sbjct: 349 SLSDSEYIQLTPTDPKFPKMVVPVKGLSDCIKKRLEDGDASMEMELVAAQISDWGEESSL 408
Query: 454 PQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLR 513
P AHV+H+FGRGGE+EP+I AIL+ENAI S FSPESLSCLP +PW+VPQEE+ R+DLR
Sbjct: 409 PLAHVMHIFGRGGEIEPRIAAILFENAIRPSEFSPESLSCLPHIPWKVPQEEIERRRDLR 468
Query: 514 NFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVY 573
N CIFTIDPSTATDLDDALS+E+LS G RVGVHIAD SYFVLP LD EAQ RSTSVY
Sbjct: 469 NLCIFTIDPSTATDLDDALSVEKLSGGNFRVGVHIADASYFVLPDGVLDREAQSRSTSVY 528
Query: 574 MLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYE 633
+LQ K+PMLP LLSE +GSL PGVDRLAFSIFWD+N AGDVVDRWIGRTVI+SCCKLSYE
Sbjct: 529 LLQHKLPMLPPLLSENLGSLIPGVDRLAFSIFWDINLAGDVVDRWIGRTVIQSCCKLSYE 588
Query: 634 HAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRL 693
HAQ IIDG FDVE V+RSIK LY +SK L+ RF DGAL L
Sbjct: 589 HAQGIIDGMFDVE--------------------VIRSIKYLYAISKTLRANRFNDGALLL 628
Query: 694 ENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPA 753
+ +K + LFDE+G TAAE+I+RAFPD+ALLRRHP
Sbjct: 629 DGAKVILLFDEHG--------------------------TAAEIISRAFPDNALLRRHPE 662
Query: 754 PNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLA 813
PN+RKLREFEAFCSKHGL+LDTSSSGQF+ SLEQ REKLK+D VLFDIL++YA+RPMQLA
Sbjct: 663 PNLRKLREFEAFCSKHGLELDTSSSGQFNHSLEQIREKLKNDSVLFDILLSYASRPMQLA 722
Query: 814 SYFCSGDFKDD-TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRM 872
+YFCSGD KD+ +W HYALA P+YTHFTSPLRRYPD++VHRTL AA+EAE+LY KH
Sbjct: 723 TYFCSGDLKDNKNEWSHYALAVPLYTHFTSPLRRYPDIIVHRTLAAAIEAEELYLKHGAK 782
Query: 873 LPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRK 932
+ K + E +R R TGI +DK+AAES+EG++ALSVAA K+ +PC +IL +V +CN+RK
Sbjct: 783 IQKVKNGEEMR-RCFTGIHFDKNAAESVEGQKALSVAASKHRLPCTEILADVVAYCNERK 841
Query: 933 LACRNVKDACVKLYMWILLKKKEVLFS 959
LA R+ KD C +LYMW+LLKKKEVL S
Sbjct: 842 LASRHAKDGCERLYMWVLLKKKEVLLS 868
>gi|449499475|ref|XP_004160827.1| PREDICTED: LOW QUALITY PROTEIN: DIS3-like exonuclease 2-like [Cucumis
sativus]
Length = 1159
Score = 1015 bits (2625), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 527/924 (57%), Positives = 664/924 (71%), Gaps = 15/924 (1%)
Query: 45 GEATQ-TKNGYKTKNLTSSMNCSSTKQQDLDLHPLSEQDPTGASTVTFSSMPTMHINEE- 102
GEA++ +NG NLTS N SS QQ+ + E T + FSS+P +HINE+
Sbjct: 85 GEASECMENGRIDANLTSPSNYSSLTQQENHSNQQIEHGLTRGDKIGFSSLPPLHINEQA 144
Query: 103 ESAESGSTQSQLLLATDLCGSIISRSCPEPIANDSSCWAYTNKDDNPSHQSE--ARCKIF 160
E + S + +Q ++D G +++SCPE IA+ N+ P+ ++ + K F
Sbjct: 145 ELSASHNLMNQNHHSSD-AGGRVTKSCPEQIASGRYSGISLNQHSPPADVTDNNTQRKYF 203
Query: 161 APHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEGDF 220
HWS++ VNE L+KG FKAL+RVNAHNRLEAYCKI+G+ DVLI GIA+QNRAVEGD
Sbjct: 204 PSHWSVDDVNEGLQKGGIFKALFRVNAHNRLEAYCKIDGLPIDVLINGIASQNRAVEGDI 263
Query: 221 VLIKVDRLSLWAKMKGFS---NNSSIVEDSNLPTEANGMHSDICKGKSKVD--VSYEYSN 275
V IK+D + W KMKG S NN +ED+NLP E + CKGK+KVD V +
Sbjct: 264 VAIKLDPFTSWTKMKGTSEAHNNMHSMEDANLPAELTEKNDHNCKGKNKVDADVKSDSFR 323
Query: 276 CTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIE 335
T L +K +D ++ Y + + S + ++ SS Q+D AI
Sbjct: 324 STSLPDKRCCSEDKVLDGVACDVLLS--NYEQCDINELSVVNPSQAHHSSNQDDVSKAIG 381
Query: 336 RLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSV 395
R+ A+I+ YP KRPTGRVV+I+E+S R+ +VG LNV ++ +++ K++ K+ S S
Sbjct: 382 RICALINLYPAKRPTGRVVTILEKSRLRENVVGHLNVKKFLSFQEFYVKESTKSCLSPS- 440
Query: 396 PDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQ 455
+ Y+QL P ++P M+VL DLP+ IKKRL+ GD T+E ELVAARI EW +ES P+
Sbjct: 441 QNCGYVQLMPNDARFPIMMVLAGDLPNCIKKRLDNGDVTVENELVAARIYEWVKESSSPR 500
Query: 456 AHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNF 515
AHVLHV GRG EVE I+AIL+ENA FS +SLSC+P PW++P EEL R+D+RN
Sbjct: 501 AHVLHVLGRGNEVESHIDAILFENAFRTCEFSQDSLSCVPQTPWKIPPEELQCRRDIRNL 560
Query: 516 CIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYML 575
CIFTIDPS+A+DLDDALS++RL++GI RVG+HIADVSYFVLP TALD EAQ+RSTSVY+L
Sbjct: 561 CIFTIDPSSASDLDDALSVQRLANGIFRVGIHIADVSYFVLPDTALDKEAQIRSTSVYLL 620
Query: 576 QRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHA 635
QRKIPMLP LLSE +GSLNPGVDRLAFS+F D+NS GDV D WI RTVI CCKLSYEHA
Sbjct: 621 QRKIPMLPPLLSESIGSLNPGVDRLAFSLFLDINSCGDVKDFWIERTVICCCCKLSYEHA 680
Query: 636 QDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLEN 695
QDIIDG D +SS G PQL+GQF W DV+ S+K L+E+SK +K+KRF +GALRLEN
Sbjct: 681 QDIIDGLIDSDSSELFGNNCPQLHGQFTWHDVISSVKLLHEISKTVKEKRFRNGALRLEN 740
Query: 696 SKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPN 755
SK ++L+DEYG PYDS+ ++D NFL EEFMLLAN+T AEVI+R FPDSALLRRHP P
Sbjct: 741 SKLIYLYDEYGIPYDSMFYEQKDSNFLVEEFMLLANRTVAEVISRTFPDSALLRRHPEPM 800
Query: 756 MRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASY 815
+RKLREFE FCSKHG +LDTSSS F QSLEQ R +L+DD +LFDILI+YATRPMQLA+Y
Sbjct: 801 LRKLREFETFCSKHGFELDTSSSVHFQQSLEQIRIELQDDPLLFDILISYATRPMQLATY 860
Query: 816 FCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPK 875
FCSG+ KD HYALA P+YTHFTSPLRRYPD+VVHRTL AA+EAEK+Y KH+ ++ K
Sbjct: 861 FCSGELKDGETRSHYALAVPLYTHFTSPLRRYPDIVVHRTLAAAIEAEKMYLKHKGVIQK 920
Query: 876 NNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLAC 935
N E R TGI++DKDAA+SLEGREALS AALK+GVPC+ +L++VA HCNDRKLA
Sbjct: 921 VNSNE--ETRCFTGIYFDKDAADSLEGREALSSAALKHGVPCSKLLLDVALHCNDRKLAS 978
Query: 936 RNVKDACVKLYMWILLKKKEVLFS 959
++V D KLYMW LLKKK++LFS
Sbjct: 979 KHVADGIEKLYMWALLKKKKILFS 1002
>gi|297842545|ref|XP_002889154.1| ribonuclease II family protein [Arabidopsis lyrata subsp. lyrata]
gi|297334995|gb|EFH65413.1| ribonuclease II family protein [Arabidopsis lyrata subsp. lyrata]
Length = 1062
Score = 978 bits (2527), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 530/982 (53%), Positives = 675/982 (68%), Gaps = 53/982 (5%)
Query: 1 MRGGSAVEQSQPMVVDEVVDKEKKKKNR-RSNRRSNKNSSVNEIRGEATQTKNGYKTKNL 59
M+ S+VEQS V+ + + KKK+NR + + R +K+SSV ++ +G +
Sbjct: 1 MKSASSVEQS----VERIENGHKKKRNRPQKHIRRSKHSSVPIEDTHVEESSDGRTSTRS 56
Query: 60 TSSMNCSSTKQQDLDLHPLSEQDPTGASTVTFSSMPTMHI-NEEESAESGSTQSQLLLAT 118
+ + SS+KQQ D +E + AS V F+SMP M E+ G + S LL +
Sbjct: 57 KAKDSTSSSKQQRSDNS--NELEAMRASNVAFNSMPPMRFEGRAETGYPGRSASPLLSSP 114
Query: 119 DLCGSIISRSCPEPIANDSSCWAYTNKDDNPSHQSEARC--KIFAPHWSMEAVNEALEKG 176
+ ++S+SCP+P A C D + Q E KIF+ HWS++AV++ALEKG
Sbjct: 115 QVSKQLLSKSCPDPRA----CEHSPRMDGDLFQQIEGSSQRKIFSSHWSLDAVSQALEKG 170
Query: 177 DAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEGDFVLIKVDRLSLWAKMKG 236
+AFKAL+RVNAHNR EAYCKI+GV TD+LI G QNRAVEGD V+IK+D LSLW KMKG
Sbjct: 171 EAFKALFRVNAHNRNEAYCKIDGVPTDILINGNVGQNRAVEGDIVVIKLDPLSLWPKMKG 230
Query: 237 FSNNS-SIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCTLLSEKGIHHDDDSSSEAY 295
F S + +E +N P E + ++ + K+ +DV + + L A
Sbjct: 231 FVTESVAKLEGTNSPPEKDDKNA---RQKNAIDVVEGFEDGFL---------------AN 272
Query: 296 NQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVS 355
N +I + N + DS S +Q + +E+L ++SS+P KRPTG+VV+
Sbjct: 273 NSSVIGQGAKNGVTRSSSPLLDSCLG-SFCEQKGNCSVVEKLCGILSSFPHKRPTGQVVA 331
Query: 356 IIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVV 415
++E+S RD IVG L+V W +YK DAK+ +S +S+ D EY+QL P P++PK++V
Sbjct: 332 VVEKSLVRDSIVGLLDVKGWIHYK---ESDAKRCKSPMSLSDDEYVQLMPADPRFPKLIV 388
Query: 416 LVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAI 475
LP SI+ RLE D T+E ELVAA+I +W E SPFP A + H+FGRG E+EPQINAI
Sbjct: 389 PFHVLPGSIRARLENLDPTLEAELVAAQIVDWGEGSPFPVAQITHLFGRGSELEPQINAI 448
Query: 476 LYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIE 535
LY+N++C S FSP SL+ LP VPWEVP+EE+ RKDLR+ C+ TIDPSTATDLDDALS++
Sbjct: 449 LYQNSVCESDFSPGSLTSLPRVPWEVPEEEVQRRKDLRDQCVLTIDPSTATDLDDALSVQ 508
Query: 536 RLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNP 595
L G RVGVHIADVSYFVLP TALD EAQ RSTSVY+ QRK+ MLP LLSE +GSL P
Sbjct: 509 SLPGGFFRVGVHIADVSYFVLPETALDTEAQFRSTSVYLRQRKVSMLPPLLSENIGSLTP 568
Query: 596 GVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGW 655
G DRL FSIFWDLN GDV+DRWIGRTVIRSCCKLSY+HAQDIIDGK S+ GW
Sbjct: 569 GADRLTFSIFWDLNREGDVIDRWIGRTVIRSCCKLSYDHAQDIIDGK-----SDGAENGW 623
Query: 656 PQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSG 715
P L+G FEWSDV+RS++ L E+S L+ KR +GAL+LENSKPVFLFDE+G PYD V+
Sbjct: 624 PALHGSFEWSDVIRSVEQLSEISSTLRQKRLRNGALQLENSKPVFLFDEHGVPYDFVMCS 683
Query: 716 REDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDT 775
R+ NFL EEFMLLAN TAAEVI++A+P SALLRRHP PN RKL+EFE FCSKHG+ LD
Sbjct: 684 RKGSNFLVEEFMLLANMTAAEVISQAYPASALLRRHPEPNTRKLKEFEGFCSKHGMDLDI 743
Query: 776 SSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDT-DWGHYALAF 834
SSSGQ +SLE+ L+DD V DIL NYA +PMQLASYFC+G+ KD +WGHYALA
Sbjct: 744 SSSGQLQESLEKITGNLQDDSVFVDILNNYAIKPMQLASYFCTGNLKDSVAEWGHYALAV 803
Query: 835 PVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDK 894
P+YTHFTSPLRRYPD+VVHR + AALEAE+LY K L + + E G TGI ++K
Sbjct: 804 PLYTHFTSPLRRYPDIVVHRAIAAALEAEELYSK----LKQTSIDE--VGSCFTGIHFNK 857
Query: 895 DAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKK 954
DAAES+EG+EALSVAALK+GVP +IL +VA +CN+RKLA R V+DAC KLY W +LKKK
Sbjct: 858 DAAESMEGKEALSVAALKHGVPSTEILSDVAAYCNERKLAARKVRDACDKLYTWFVLKKK 917
Query: 955 EVLFSC--LILYLTS-FSTIHV 973
EV F C ++ L S F T+++
Sbjct: 918 EV-FPCEARVMNLGSRFMTVYI 938
>gi|357488975|ref|XP_003614775.1| DIS3-like exonuclease [Medicago truncatula]
gi|355516110|gb|AES97733.1| DIS3-like exonuclease [Medicago truncatula]
Length = 1162
Score = 966 bits (2498), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/967 (52%), Positives = 665/967 (68%), Gaps = 53/967 (5%)
Query: 16 DEVVDKEKKKKNRRSNRRSNKNSSVNEIRGEATQTKNGYKTKNLTSSMNCSSTKQQDLDL 75
D+V +KKK+ + N SS +E+ EA KN T S L
Sbjct: 17 DDVEKDKKKKRRSNRRNKQNPPSSASEV-NEAIGVSPECSGKNGTPVQPSGSVSNS---L 72
Query: 76 HPLSEQDPTGASTVTFSSMPTMHINEEESAESGSTQSQLLLATDLCGSIISRSCPEPIAN 135
P DP S+P + N + + ++LL +++ ++ PEP+
Sbjct: 73 AP--SDDPI--------SIPLIPYN---GPVAPADMQKMLLHLR---TLVLQNSPEPVGC 116
Query: 136 DSSCWAYTNKDDNPSHQSE----ARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRL 191
S + TN+ + + S+ + F+PHWS+E V +ALE+GD FKA +RVNAHNR
Sbjct: 117 LES--SGTNEKKDSARYSKFGLSGQRNYFSPHWSVEVVEKALERGDVFKATFRVNAHNRT 174
Query: 192 EAYCKIEGVQTDVLITGIAAQNRAVEGDFVLIKVDRLSLWAKMKG---FSNNSSIVEDSN 248
EAYC I+GV TD+LI G AQNRAVEGD V IK+D L LW KMKG +NN++++E N
Sbjct: 175 EAYCSIDGVPTDILIVGAPAQNRAVEGDIVAIKIDPLPLWTKMKGPNVANNNTAVLEGCN 234
Query: 249 LPTEANGMHSDICKGKSKVDVSYEYS---------------NCTLLSEKGIHHDDDSSSE 293
L E N + C+G KVD +EYS + ++ I+ ++ +
Sbjct: 235 LLVEDNIAGDNNCEGIEKVDADHEYSGQNKEESFDNSSPYRSYPFPEKRYIYENNTTQGS 294
Query: 294 AYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRV 353
+ +I G + +G + + S + S S Q++ MNA+E++ +++S+P+KRPTGRV
Sbjct: 295 PNHLSLIGLTGRDNNDGPNCDSPASIKINSGSGQSEVMNAVEKICLLVNSFPSKRPTGRV 354
Query: 354 VSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKM 413
V++IERSPRR+ IVG LNV QW + ++KD +KN++S+S + EYIQLTP PK+P +
Sbjct: 355 VAVIERSPRRECIVGHLNVKQWVFSQEINKKDPRKNKNSVS--EHEYIQLTPIDPKFPNI 412
Query: 414 VVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQIN 473
++LV+DLP SIK RL+ GDA IE +LVAA+I +W EESPFP+ +L FGRG E++P ++
Sbjct: 413 MLLVRDLPKSIKIRLKNGDAAIEKDLVAAQIVDWFEESPFPEGDILQHFGRGSEIQPNLD 472
Query: 474 AILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALS 533
+IL++NAIC S FS E+LSCLP WE+P +EL SR DLRN CIF+IDPSTATDLDDALS
Sbjct: 473 SILFKNAICLSEFSAEALSCLPHATWELPLKELQSRTDLRNLCIFSIDPSTATDLDDALS 532
Query: 534 IERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSL 593
IE+L +G RVG+HIADVSYFVLP TALD+EAQ RSTSVY+LQ+K+PML L+SE +GSL
Sbjct: 533 IEKLPNGNYRVGIHIADVSYFVLPDTALDVEAQFRSTSVYLLQKKLPMLSALISENIGSL 592
Query: 594 NPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGE 653
NPGVDRLAFS+ DLN AGDVVDRWIGRTVI+SCCKLSYEHAQDIIDG F+ ESS+ +
Sbjct: 593 NPGVDRLAFSMLLDLNVAGDVVDRWIGRTVIQSCCKLSYEHAQDIIDGAFNFESSSFHED 652
Query: 654 GWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVL 713
G+P+L+G+F W DV+ S+KSLYE+S +LK KRF GALRL+ K V L DE G PY+S
Sbjct: 653 GYPKLHGRFGWPDVITSLKSLYEISNVLKHKRFAGGALRLDKPKIVILSDENGIPYNSTF 712
Query: 714 SGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQL 773
S +++ N L EE+MLLAN TAAE+I RA+PD ALLRRHP PNMRKLREF AFC KHGL L
Sbjct: 713 SEQKESNLLIEEYMLLANTTAAEIICRAYPDVALLRRHPEPNMRKLREFTAFCQKHGLNL 772
Query: 774 DTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDT-DWGHYAL 832
DTSSSG SLEQ +EKLKDD VL+DILI+YA++ MQ ASYFCS D KD+ +WGHYAL
Sbjct: 773 DTSSSGHIRSSLEQMKEKLKDDPVLYDILISYASKLMQSASYFCSSDLKDNEHEWGHYAL 832
Query: 833 AFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFY 892
A P+YTHFTSPLRRY D+VVHRTL A +EAE++Y K + + GV R TGI +
Sbjct: 833 AVPLYTHFTSPLRRYADIVVHRTLLATIEAEEIYLK------QVGKKMGVEKRCFTGINF 886
Query: 893 DKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLK 952
DK AES+E REAL AALK+ VP A+IL ++A HCNDRKLA + VKD+C +LYMW LLK
Sbjct: 887 DKKTAESVECREALMAAALKHRVPSAEILADIAAHCNDRKLASKYVKDSCERLYMWFLLK 946
Query: 953 KKEVLFS 959
+++V+ S
Sbjct: 947 QQKVILS 953
>gi|12323300|gb|AAG51632.1|AC012193_14 putative 3'-5' exoribonuclease, 3' partial; 3320-1 [Arabidopsis
thaliana]
Length = 935
Score = 962 bits (2487), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/966 (54%), Positives = 666/966 (68%), Gaps = 50/966 (5%)
Query: 15 VDEVVDKEKKKKNR--RSNRRSNKNSSVNEIRGEATQTKNGYKTKNLTSSMNCSSTKQQD 72
V+ + + KKK+NR + NRRS K SSV ++ +G + + + SS+KQQ
Sbjct: 10 VERIENGHKKKRNRPQKQNRRS-KQSSVPIEDAHVEESLDGRDSSRSKAKDSTSSSKQQR 68
Query: 73 LDLHPLSEQDPTGASTVTFSSMPTMHINEEESAESGSTQSQLLLATDLCGSIISRSCPEP 132
+ E + AS V F+SMP M ES + S LL + ++ ++S+SCP+P
Sbjct: 69 PNT---DELEAMRASNVAFNSMPPMRA---ESGYPRRSASPLLSSPEVSKQLLSKSCPDP 122
Query: 133 IANDSSCWAYTNKDDNPSHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLE 192
A + S N + + ++ KIF+ HWS++AV EALEKG+AFKAL+RVNAHNR E
Sbjct: 123 RACEQS--PGMNGELFQQIEGSSQRKIFSSHWSLDAVTEALEKGEAFKALFRVNAHNRNE 180
Query: 193 AYCKIEGVQTDVLITGIAAQNRAVEGDFVLIKVDRLSLWAKMKGFSNNSSI-VEDSNLPT 251
AYCKI+GV TD+LI G Q+RAVEGD V+IK+D LSLW KMKGF S+ E +N P
Sbjct: 181 AYCKIDGVPTDILINGNVCQSRAVEGDTVVIKLDPLSLWPKMKGFVTESAAKPEGTNSPP 240
Query: 252 EANGMHSDICKGKSKVDVSYEYSNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGH 311
E + + + K+ +DV + E G + S +I + N +
Sbjct: 241 EKDDKKA---RQKNGIDVVEGF-------EDGFSKNKSS--------VIGKGAKNGVTPS 282
Query: 312 HPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLN 371
P + DS S +Q +A+++L ++SS+P KRPTG+VV+++E+S RD IVG L+
Sbjct: 283 SPPSLDSCLG-SFCEQKGNCSAVDKLCGILSSFPHKRPTGQVVAVVEKSLVRDSIVGLLD 341
Query: 372 VNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEG 431
V W +YK D K+ +S LS+ D EY+QL P P++PK++V LP SI+ RLE
Sbjct: 342 VKGWIHYK---ESDPKRCKSPLSLSDDEYVQLMPADPRFPKLIVPFHVLPGSIRARLENL 398
Query: 432 DATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL 491
D +E ELVAA+I +W E SPFP A + H+FGRG E+EPQINAILY+N++C S FSP SL
Sbjct: 399 DPNLEAELVAAQIVDWGEGSPFPVAQITHLFGRGSELEPQINAILYQNSVCDSDFSPGSL 458
Query: 492 SCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADV 551
+ LP VPWEVP+EE+ RKDLR+ C+ TIDPSTATDLDDALS++ L G RVGVHIADV
Sbjct: 459 TSLPRVPWEVPEEEVQRRKDLRDLCVLTIDPSTATDLDDALSVQSLPGGFFRVGVHIADV 518
Query: 552 SYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSA 611
SYFVLP TALD EA+ RSTSVY++QRKI MLP LLSE VGSL+PG DRLAFSI WDLN
Sbjct: 519 SYFVLPETALDTEARFRSTSVYLMQRKISMLPPLLSENVGSLSPGADRLAFSILWDLNRE 578
Query: 612 GDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSI 671
GDV+DRWIGRT+IRSCCKLSY+HAQDIIDGK DV + GWP L+G F+W DV RS+
Sbjct: 579 GDVIDRWIGRTIIRSCCKLSYDHAQDIIDGKSDVAEN-----GWPALHGSFKWCDVTRSV 633
Query: 672 KSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLAN 731
K L E+S L+ KRF +GAL+LENSKPVFLFDE+G PYD V R+ NFL EEFMLLAN
Sbjct: 634 KQLSEISTTLRQKRFRNGALQLENSKPVFLFDEHGVPYDFVTCSRKGSNFLVEEFMLLAN 693
Query: 732 KTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREK 791
TAAEVI++A+ S+LLRRHP PN RKL+EFE FCSKHG+ LD SSSGQ SLE+
Sbjct: 694 MTAAEVISQAYRASSLLRRHPEPNTRKLKEFEGFCSKHGMDLDISSSGQLQDSLEKITGN 753
Query: 792 LKDDYVLFDILINYATRPMQLASYFCSGDFKDDT-DWGHYALAFPVYTHFTSPLRRYPDL 850
LKDD V DIL NYA +PMQLASYFC+G+ KD +WGHYALA P+YTHFTSPLRRYPD+
Sbjct: 754 LKDDSVFVDILNNYAIKPMQLASYFCTGNLKDSVAEWGHYALAVPLYTHFTSPLRRYPDI 813
Query: 851 VVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAA 910
VVHR L AALEAE+LY K + + EG R F TGI ++KDAAES+EG+EALSVAA
Sbjct: 814 VVHRALAAALEAEELYSKQK----QTAIDEG-RSCF-TGIHFNKDAAESIEGKEALSVAA 867
Query: 911 LKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLFSC--LILYLTS- 967
LK+GVP +IL +VA +CN+RKLA R V+DAC KLY W +LK+KE+ F C ++ L S
Sbjct: 868 LKHGVPSTEILSDVAAYCNERKLAARKVRDACDKLYTWFVLKQKEI-FPCEARVMNLGSR 926
Query: 968 FSTIHV 973
F T+++
Sbjct: 927 FMTVYI 932
>gi|15220899|ref|NP_177891.1| Ribonuclease II/R-like protein [Arabidopsis thaliana]
gi|110737965|dbj|BAF00919.1| putative 3'-5' exoribonuclease [Arabidopsis thaliana]
gi|332197887|gb|AEE36008.1| Ribonuclease II/R-like protein [Arabidopsis thaliana]
Length = 1055
Score = 961 bits (2484), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/966 (54%), Positives = 666/966 (68%), Gaps = 50/966 (5%)
Query: 15 VDEVVDKEKKKKNR--RSNRRSNKNSSVNEIRGEATQTKNGYKTKNLTSSMNCSSTKQQD 72
V+ + + KKK+NR + NRRS K SSV ++ +G + + + SS+KQQ
Sbjct: 10 VERIENGHKKKRNRPQKQNRRS-KQSSVPIEDAHVEESLDGRDSSRSKAKDSTSSSKQQR 68
Query: 73 LDLHPLSEQDPTGASTVTFSSMPTMHINEEESAESGSTQSQLLLATDLCGSIISRSCPEP 132
+ E + AS V F+SMP M ES + S LL + ++ ++S+SCP+P
Sbjct: 69 PNT---DELEAMRASNVAFNSMPPMR---AESGYPRRSASPLLSSPEVSKQLLSKSCPDP 122
Query: 133 IANDSSCWAYTNKDDNPSHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLE 192
A + S N + + ++ KIF+ HWS++AV EALEKG+AFKAL+RVNAHNR E
Sbjct: 123 RACEQS--PGMNGELFQQIEGSSQRKIFSSHWSLDAVTEALEKGEAFKALFRVNAHNRNE 180
Query: 193 AYCKIEGVQTDVLITGIAAQNRAVEGDFVLIKVDRLSLWAKMKGFSNNSSI-VEDSNLPT 251
AYCKI+GV TD+LI G Q+RAVEGD V+IK+D LSLW KMKGF S+ E +N P
Sbjct: 181 AYCKIDGVPTDILINGNVCQSRAVEGDTVVIKLDPLSLWPKMKGFVTESAAKPEGTNSPP 240
Query: 252 EANGMHSDICKGKSKVDVSYEYSNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGH 311
E + + + K+ +DV + E G + S +I + N +
Sbjct: 241 EKDDKKA---RQKNGIDVVEGF-------EDGFSKNKSS--------VIGKGAKNGVTPS 282
Query: 312 HPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLN 371
P + DS S +Q +A+++L ++SS+P KRPTG+VV+++E+S RD IVG L+
Sbjct: 283 SPPSLDSCLG-SFCEQKGNCSAVDKLCGILSSFPHKRPTGQVVAVVEKSLVRDSIVGLLD 341
Query: 372 VNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEG 431
V W +YK D K+ +S LS+ D EY+QL P P++PK++V LP SI+ RLE
Sbjct: 342 VKGWIHYK---ESDPKRCKSPLSLSDDEYVQLMPADPRFPKLIVPFHVLPGSIRARLENL 398
Query: 432 DATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL 491
D +E ELVAA+I +W E SPFP A + H+FGRG E+EPQINAILY+N++C S FSP SL
Sbjct: 399 DPNLEAELVAAQIVDWGEGSPFPVAQITHLFGRGSELEPQINAILYQNSVCDSDFSPGSL 458
Query: 492 SCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADV 551
+ LP VPWEVP+EE+ RKDLR+ C+ TIDPSTATDLDDALS++ L G RVGVHIADV
Sbjct: 459 TSLPRVPWEVPEEEVQRRKDLRDLCVLTIDPSTATDLDDALSVQSLPGGFFRVGVHIADV 518
Query: 552 SYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSA 611
SYFVLP TALD EA+ RSTSVY++QRKI MLP LLSE VGSL+PG DRLAFSI WDLN
Sbjct: 519 SYFVLPETALDTEARFRSTSVYLMQRKISMLPPLLSENVGSLSPGADRLAFSILWDLNRE 578
Query: 612 GDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSI 671
GDV+DRWIGRT+IRSCCKLSY+HAQDIIDGK DV + GWP L+G F+W DV RS+
Sbjct: 579 GDVIDRWIGRTIIRSCCKLSYDHAQDIIDGKSDVAEN-----GWPALHGSFKWCDVTRSV 633
Query: 672 KSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLAN 731
K L E+S L+ KRF +GAL+LENSKPVFLFDE+G PYD V R+ NFL EEFMLLAN
Sbjct: 634 KQLSEISTTLRQKRFRNGALQLENSKPVFLFDEHGVPYDFVTCSRKGSNFLVEEFMLLAN 693
Query: 732 KTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREK 791
TAAEVI++A+ S+LLRRHP PN RKL+EFE FCSKHG+ LD SSSGQ SLE+
Sbjct: 694 MTAAEVISQAYRASSLLRRHPEPNTRKLKEFEGFCSKHGMDLDISSSGQLQDSLEKITGN 753
Query: 792 LKDDYVLFDILINYATRPMQLASYFCSGDFKDDT-DWGHYALAFPVYTHFTSPLRRYPDL 850
LKDD V DIL NYA +PMQLASYFC+G+ KD +WGHYALA P+YTHFTSPLRRYPD+
Sbjct: 754 LKDDSVFVDILNNYAIKPMQLASYFCTGNLKDSVAEWGHYALAVPLYTHFTSPLRRYPDI 813
Query: 851 VVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAA 910
VVHR L AALEAE+LY K + + EG R F TGI ++KDAAES+EG+EALSVAA
Sbjct: 814 VVHRALAAALEAEELYSKQK----QTAIDEG-RSCF-TGIHFNKDAAESIEGKEALSVAA 867
Query: 911 LKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLFSC--LILYLTS- 967
LK+GVP +IL +VA +CN+RKLA R V+DAC KLY W +LK+KE+ F C ++ L S
Sbjct: 868 LKHGVPSTEILSDVAAYCNERKLAARKVRDACDKLYTWFVLKQKEI-FPCEARVMNLGSR 926
Query: 968 FSTIHV 973
F T+++
Sbjct: 927 FMTVYI 932
>gi|357488939|ref|XP_003614757.1| DIS3-like exonuclease [Medicago truncatula]
gi|355516092|gb|AES97715.1| DIS3-like exonuclease [Medicago truncatula]
Length = 1051
Score = 857 bits (2215), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/860 (52%), Positives = 580/860 (67%), Gaps = 89/860 (10%)
Query: 123 SIISRSCPEPIANDSSCWAYTNKDDNPSHQSE----ARCKIFAPHWSMEAVNEALEKGDA 178
+++ ++ PEP+ S + TN+ + + S+ + F+PHWS+E V +ALE+GD
Sbjct: 104 TLVLQNSPEPVGCLES--SGTNEKKDSARYSKFGLSGQRNYFSPHWSVEVVEKALERGDV 161
Query: 179 FKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEGDFVLIKVDRLSLWAKMKG-- 236
FKA +RVNAHNR EAYC I+GV TD+LI G AQNRAVEGD V IK+D L LW KMKG
Sbjct: 162 FKATFRVNAHNRTEAYCSIDGVPTDILIVGAPAQNRAVEGDIVAIKIDPLPLWTKMKGPN 221
Query: 237 -FSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYS---------------NCTLLS 280
+NN++++E NL E N + C+G KVD +EYS +
Sbjct: 222 VANNNTAVLEGCNLLVEDNIAGDNNCEGIEKVDADHEYSGQNKEESFDNSSPYRSYPFPE 281
Query: 281 EKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSAM 340
++ I+ ++ + + +I G + +G + + S + S S Q++ MNA+E++ +
Sbjct: 282 KRYIYENNTTQGSPNHLSLIGLTGRDNNDGPNCDSPASIKINSGSGQSEVMNAVEKICLL 341
Query: 341 ISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREY 400
++S+P+KRPTGRVV++IERSPRR+ IVG LNV QW + ++KD +KN++S+S + EY
Sbjct: 342 VNSFPSKRPTGRVVAVIERSPRRECIVGHLNVKQWVFSQEINKKDPRKNKNSVS--EHEY 399
Query: 401 IQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLH 460
IQLTP PK+P +++LV+DLP SIK RL+ GDA IE +LVAA+I +W EESPFP+ +L
Sbjct: 400 IQLTPIDPKFPNIMLLVRDLPKSIKIRLKNGDAAIEKDLVAAQIVDWFEESPFPEGDILQ 459
Query: 461 VFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTI 520
FGRG E++ + E IC F I
Sbjct: 460 HFGRGSEIQNCKVELTLE--ICA---------------------------------FFLI 484
Query: 521 DPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIP 580
DPSTATDLDDALSIE+L +G RVG+HIADVSYFVLP TALD+EAQ RSTSVY+LQ+K+P
Sbjct: 485 DPSTATDLDDALSIEKLPNGNYRVGIHIADVSYFVLPDTALDVEAQFRSTSVYLLQKKLP 544
Query: 581 MLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIID 640
ML L+SE +GSLNPGVDRLAFS+ DLN AGDVVDRWIGRTVI+SCCKLSYEHAQDIID
Sbjct: 545 MLSALISENIGSLNPGVDRLAFSMLLDLNVAGDVVDRWIGRTVIQSCCKLSYEHAQDIID 604
Query: 641 GKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVF 700
G F+ ESS+ +G+P+L+G+F W DV+ S+KSLYE+S +LK KRF GALRL+ K V
Sbjct: 605 GAFNFESSSFHEDGYPKLHGRFGWPDVITSLKSLYEISNVLKHKRFAGGALRLDKPKIVI 664
Query: 701 LFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLR 760
L DE G PY+S S +++ N L EE+MLLAN TAAE+I RA+PD ALLRRHP PNMRKLR
Sbjct: 665 LSDENGIPYNSTFSEQKESNLLIEEYMLLANTTAAEIICRAYPDVALLRRHPEPNMRKLR 724
Query: 761 EFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGD 820
EF AFC KHGL LDTSSSG SLEQ +EKLKDD VL+DILI+YA++ MQ ASYFCS D
Sbjct: 725 EFTAFCQKHGLNLDTSSSGHIRSSLEQMKEKLKDDPVLYDILISYASKLMQSASYFCSSD 784
Query: 821 FKDDT-DWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHR 879
KD+ +WGHYALA P+YTHFTSPLRRY D+VVHRTL A +EAE++Y K + +
Sbjct: 785 LKDNEHEWGHYALAVPLYTHFTSPLRRYADIVVHRTLLATIEAEEIYLK------QVGKK 838
Query: 880 EGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVK 939
GV R T ALK+ VP A+IL ++A HCNDRKLA + VK
Sbjct: 839 MGVEKRCFT---------------------ALKHRVPSAEILADIAAHCNDRKLASKYVK 877
Query: 940 DACVKLYMWILLKKKEVLFS 959
D+C +LYMW LLK+++V+ S
Sbjct: 878 DSCERLYMWFLLKQQKVILS 897
>gi|115448745|ref|NP_001048152.1| Os02g0754100 [Oryza sativa Japonica Group]
gi|46805940|dbj|BAD17234.1| putative Ribosomal RNA processing protein [Oryza sativa Japonica
Group]
gi|113537683|dbj|BAF10066.1| Os02g0754100 [Oryza sativa Japonica Group]
Length = 1067
Score = 796 bits (2055), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/829 (52%), Positives = 558/829 (67%), Gaps = 58/829 (6%)
Query: 158 KIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVE 217
+ F HW +AV EA++ G+AF +RVNAHNR EAYC IEG+ DVLITG+A QNRA+E
Sbjct: 117 RFFQSHWPEQAVEEAIKGGNAFVGKFRVNAHNRNEAYCTIEGIPVDVLITGVA-QNRAIE 175
Query: 218 GDFVLIKVDRLSLWAKMKG--FSNNSSIVEDSNL--PTEANGMHSDICKGKSKVDVSYEY 273
GD V + ++ ++ W +MKG + N +I E S + E NG H K + D + +
Sbjct: 176 GDLVAMTLEPVAYWTRMKGPNITCNPAIGEGSAVREVGETNGNHDG---KKGQTDANCRF 232
Query: 274 SNCT----LLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQND 329
NC+ + H + S+A E NGH + ++ K +++
Sbjct: 233 GNCSNGQPVSDRTHYRHKNSGFSKAVTCE----------NGH-ATVPENCGKDLGEGKSE 281
Query: 330 GMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKN 389
A+ R+ +M+ S P++RPTG+V++II++SPRRD +VGFL + + +KN
Sbjct: 282 ASRALHRICSMVYSNPSRRPTGKVLAIIKKSPRRDTVVGFLA-----PFAVCPDPEQQKN 336
Query: 390 RSSLSVPDREY---------IQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELV 440
+ S+ + I L PT K+P MVV V LPDS++ LEEGDA ELV
Sbjct: 337 QMSMLSKRMNHRASSYFSGLILLLPTDSKFPHMVVNVSTLPDSVRNHLEEGDAA--KELV 394
Query: 441 AARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWE 500
AARI +WNEES +P AHV+ + G+GG+V+ ++AIL+ENAI + FSPES+ CLP + W+
Sbjct: 395 AARISDWNEESLYPCAHVIQLLGKGGQVKTHMDAILFENAISDAEFSPESMECLPDICWK 454
Query: 501 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 560
+PQEEL RKDLRN FTIDP TATDLDDA+SIE LS GI R+GVHIADVSYFV P TA
Sbjct: 455 IPQEELEVRKDLRNVLTFTIDPPTATDLDDAISIEMLSGGIVRIGVHIADVSYFVHPETA 514
Query: 561 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIG 620
LD EAQ+RSTSVY L+RKI MLP+ LSE++ SLNPGVDRL FSI WD++ G++++RWIG
Sbjct: 515 LDAEAQIRSTSVYTLRRKISMLPLRLSEDLVSLNPGVDRLTFSIIWDIDPHGNIINRWIG 574
Query: 621 RTVIRSCCKLSYEHAQDII--DG-KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEV 677
RTVI SCCKLSY+ QD+I DG KF +S+++L Q++G FE DV++S++ LYE+
Sbjct: 575 RTVISSCCKLSYDLVQDLICSDGTKF--KSASSL-----QVHGIFEQDDVIKSLRCLYEI 627
Query: 678 SKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEV 737
SK LK+ RF GAL LE +K + FDE G P DS R D F+ EE MLLAN +AAEV
Sbjct: 628 SKNLKEIRFKGGALSLETAKLMIQFDEGGAPCDSFRYERNDACFIVEELMLLANMSAAEV 687
Query: 738 IARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYV 797
I+ AFP+ ALLRRHP PN+RK REFEAFC+++G +LD SSSGQ H SL + +EKLKDD V
Sbjct: 688 ISNAFPNCALLRRHPEPNLRKSREFEAFCARNGFELDGSSSGQLHLSLSRMKEKLKDDPV 747
Query: 798 LFDILINYATRPMQLASYFCSGDF--KDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRT 855
LFDIL+ YA++ MQ A YFC+ D K D DW HYAL+ P+YTHFTSPLRRYPD++VHRT
Sbjct: 748 LFDILMFYASKQMQSAEYFCTADLISKRD-DWAHYALSVPLYTHFTSPLRRYPDIIVHRT 806
Query: 856 LNAALEAEKLYWKHRRMLPKNNHR-----EGVRGRFLTGIFYDKDAAESLEGREALSVAA 910
LNA +EAEK+Y KHRR L N E + G F TG+ + KDAAES EG EALS AA
Sbjct: 807 LNAVIEAEKMYLKHRRSLTGQNGFNTASCEMMHGCF-TGLQFSKDAAESKEGSEALSAAA 865
Query: 911 LKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLFS 959
K+ VP D L VA HCN+RK A R +DA KLYMW L+K+KEVL +
Sbjct: 866 KKFKVPSPDNLGEVAEHCNERKWASRRAEDAGQKLYMWALIKRKEVLVA 914
>gi|326525341|dbj|BAK07940.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1056
Score = 789 bits (2038), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/823 (50%), Positives = 558/823 (67%), Gaps = 46/823 (5%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
F P+W + V +AL++G+ F +RVNAHNR EAYC I+G+ DVL+TG AQNRA+EG
Sbjct: 109 FFPPYWPEQVVEDALKRGNVFAGKFRVNAHNRNEAYCTIDGIPVDVLVTG-PAQNRAIEG 167
Query: 219 DFVLIKVDRLSLWAKMKG----FSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEY- 273
D V I +D + W +MKG S S V + +E NG HS + KG++ E
Sbjct: 168 DVVAIALDPVVYWTRMKGQNIACSPASGGVSVAREVSETNGNHS-LKKGQADASCRVEKC 226
Query: 274 SNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNA 333
SN + ++ +H +S ++Q +I G H + ++ E + ++ + A
Sbjct: 227 SNGQPVPDRMHNHHKNS---GFSQAVICENG-------HATVPENYEDLDEAK-TEFARA 275
Query: 334 IERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKD------AK 387
++R+ ++I ++P++RPTG+VVS+I++SPRR +VGFL + ++ G +K+ +K
Sbjct: 276 LQRICSVIYNHPSRRPTGKVVSVIKKSPRRSTVVGFLA--PFSDFLDGEQKNQMNVQGSK 333
Query: 388 KNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEW 447
+ S +Q+ PT PK+P+M+V L D IK+RL+EGD TI ELVAA+IDEW
Sbjct: 334 RMNHIASSIFTGLVQILPTDPKFPQMIVSTSTLSDGIKQRLKEGDITIWKELVAAQIDEW 393
Query: 448 NEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELL 507
NEESP+P A V+ G+GG VE ++AIL+ENAI + FSP S++CLP W++PQEEL
Sbjct: 394 NEESPYPWACVVQFLGKGGLVETHMDAILFENAISDAEFSPLSMACLPDTCWKIPQEELA 453
Query: 508 SRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQV 567
+RKDLRN TIDP TA+DLDDA+SIE LS GI R+GVHIADVSYFV PGTALD EAQ+
Sbjct: 454 ARKDLRNVLTLTIDPPTASDLDDAISIETLSGGIVRIGVHIADVSYFVHPGTALDAEAQI 513
Query: 568 RSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSC 627
RSTSVY L+ K+ MLP LSEE+ SLNPGVDRLAFS+ WD++ G +V+RWIG T+I SC
Sbjct: 514 RSTSVYTLRHKVSMLPSRLSEELVSLNPGVDRLAFSVIWDIDPHGSIVNRWIGHTIIFSC 573
Query: 628 CKLSYEHAQDII--DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKR 685
CKLSY+ QD+I D ++ +L Q++G+F+ D+++S++ LYE+SK LKD R
Sbjct: 574 CKLSYDLVQDLISSDASQFRSAATSL-----QVHGRFKHEDIIKSLRCLYEISKNLKDIR 628
Query: 686 FTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDS 745
F GAL L+ SKP LFDE G P DS R D F+ EE MLLAN +AAEVI+ AFPD
Sbjct: 629 FKGGALSLDTSKPTILFDEDGAPCDSYRYKRNDACFIVEELMLLANMSAAEVISNAFPDC 688
Query: 746 ALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINY 805
ALLRRHP PN RKL+EFEAFC+K+G +LD+SSSGQ H S+ + +E L+DD V+FDIL+ Y
Sbjct: 689 ALLRRHPEPNPRKLKEFEAFCAKNGFELDSSSSGQLHLSICRMKEDLQDDPVMFDILMFY 748
Query: 806 ATRPMQLASYFCSGDF--KDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE 863
A++ MQ A YFC+GD K D DW HYAL+ P+YTHFTSPLRRYPD++VHR LNA LEAE
Sbjct: 749 ASKQMQSAEYFCTGDLISKKD-DWAHYALSIPLYTHFTSPLRRYPDIIVHRILNAVLEAE 807
Query: 864 KLYWKHRRMLPKNNHREGVRG-------RFLTGIFYDKDAAESLEGREALSVAALKYGVP 916
++Y K RR+ + R GV+ R TG+ + KDAAES EGREALS AA K+ +P
Sbjct: 808 QMYLKQRRI---STGRNGVKATSSEIVSRCFTGLQFSKDAAESKEGREALSAAAKKFKIP 864
Query: 917 CADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLFS 959
++ L + A HCN+RK A R ++A KLYMW LLK+ E L S
Sbjct: 865 NSEALGDAAEHCNERKWASRRAEEAGQKLYMWALLKRNETLVS 907
>gi|357143834|ref|XP_003573072.1| PREDICTED: DIS3-like exonuclease 2-like [Brachypodium distachyon]
Length = 1080
Score = 785 bits (2027), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/832 (49%), Positives = 553/832 (66%), Gaps = 65/832 (7%)
Query: 160 FAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEGD 219
F P+W + V EA+++G F +RVNAHNR EAYC I+G+ DVL+TG AQNRA+EGD
Sbjct: 128 FPPYWPDQVVEEAIQRGHVFTGKFRVNAHNRNEAYCTIDGIPVDVLMTG-PAQNRAIEGD 186
Query: 220 FVLIKVDRLSLWAKMKG-------FSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYE 272
V I +D + W +MKG + S+V + +E NG HS + + D S
Sbjct: 187 TVAITLDPVVQWTRMKGPNSTCNPATGGVSVVREV---SETNGNHS---SKRGQADTSCR 240
Query: 273 YSNCT----LLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQN 328
+ NC+ + HH + S+A E NGH +S E ++ +
Sbjct: 241 FENCSNGLSVSDRMHNHHKNSGFSQAVKCE----------NGHA-IVPESYEDLNEGKTE 289
Query: 329 DGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKK 388
+ A++R+ ++I S+P++RPTG+VVS+I+ S RR +VGFL F D +
Sbjct: 290 AAI-ALQRICSVIYSHPSRRPTGKVVSVIKMSSRRGAVVGFLAPLSEF-------PDGEP 341
Query: 389 NRSSLSVPDRE------------YIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIE 436
+R+ ++V + + L PT PK+P M+V V LPDSI++ L+EG+ IE
Sbjct: 342 HRNQMNVQGSKRMNHIASSFVTGLVHLLPTDPKFPLMIVSVSTLPDSIRQSLKEGNIAIE 401
Query: 437 MELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC 496
E+VAA IDEWNEESPFP A V+ G+GG+VE ++AIL+EN+I + FSPES++CLP
Sbjct: 402 KEIVAACIDEWNEESPFPWARVVKFLGKGGQVESHMDAILFENSISDAEFSPESMACLPD 461
Query: 497 VPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVL 556
V W++PQEEL +RKDLRN FTIDP TA+DLDDA+SIE L +GI RVGVHIADVSYFV
Sbjct: 462 VCWKIPQEELEARKDLRNVLTFTIDPPTASDLDDAISIEILPEGIVRVGVHIADVSYFVH 521
Query: 557 PGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD 616
P TALD EAQ+RSTSVY L+RK+ MLP LS E+ SLNPG D+LAFS+ WD++ G +V+
Sbjct: 522 PETALDAEAQIRSTSVYTLRRKVSMLPSRLSAELVSLNPGADKLAFSVIWDIDPHGSIVN 581
Query: 617 RWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 676
RWIGRT+I SCCKLSY+ QD+I DV ++ Q++G FE D+++S++ LYE
Sbjct: 582 RWIGRTIIFSCCKLSYDLVQDLISS--DVSQFGSVAASL-QVHGMFEQGDIIKSLRCLYE 638
Query: 677 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 736
++K LK+ RF GAL L+ +KP+ LFDE G P DS R D F+ EE MLLAN +AAE
Sbjct: 639 ITKNLKEIRFKGGALSLDTAKPMILFDEDGAPCDSYRYKRNDACFIVEELMLLANMSAAE 698
Query: 737 VIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDY 796
VI+ AFPD ALLRRHP PN RKL+EFEAFC+++G +LD+SSSGQ H S+ + +EKL++D
Sbjct: 699 VISNAFPDCALLRRHPEPNPRKLKEFEAFCARNGFELDSSSSGQLHLSISRMKEKLQNDP 758
Query: 797 VLFDILINYATRPMQLASYFCSGDF--KDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 854
V+FDIL+ YA++ MQ A YFC+GD K+D DW HYAL+ P+YTHFTSPLRRYPD++VHR
Sbjct: 759 VMFDILMFYASKQMQSAEYFCTGDLISKND-DWAHYALSVPLYTHFTSPLRRYPDIIVHR 817
Query: 855 TLNAALEAEKLYWKHRRMLPKNNHREGVRG-------RFLTGIFYDKDAAESLEGREALS 907
TLNA +EAE++Y K +++ + R GV+ R TG+ + KDAAES EGREALS
Sbjct: 818 TLNAVIEAEQMYLKQKKV---STVRNGVKAKSCEMMDRCFTGLQFSKDAAESKEGREALS 874
Query: 908 VAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLFS 959
AA K+ P +D L A HCN+RK A R ++A KLYMW LLK+ E+ S
Sbjct: 875 AAAKKFKFPSSDDLGEAAEHCNERKWASRRAEEAGQKLYMWALLKRNEIKVS 926
>gi|242062494|ref|XP_002452536.1| hypothetical protein SORBIDRAFT_04g027560 [Sorghum bicolor]
gi|241932367|gb|EES05512.1| hypothetical protein SORBIDRAFT_04g027560 [Sorghum bicolor]
Length = 1068
Score = 770 bits (1987), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/898 (47%), Positives = 572/898 (63%), Gaps = 70/898 (7%)
Query: 85 GASTVTFSSMPTMHIN--------EEESAESGSTQSQLLLATDLCGSIISRSCPEPIAND 136
A + SMP MH+ E E++ +G++QS LL T P P
Sbjct: 61 AAGPRSVRSMPPMHVGSGGAGVDAEAEASAAGTSQSCPLLPT-----------PSPTEAP 109
Query: 137 SSCWAYTNKDDNPSHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCK 196
+S + D + F PHW AV +A+++G AF +RVNAHNR EAYC
Sbjct: 110 AS------RVDG----GAPAMRYFQPHWPQRAVEDAIKRGYAFVGKFRVNAHNRNEAYCT 159
Query: 197 IEGVQTDVLITGIAAQNRAVEGDFVLIKVDRLSLWAKMKG--FSNNSSIVEDSNLP--TE 252
I+G+ DVLITG+A QNRAVEGD V I +D ++ W +MKG + N +I DS + +E
Sbjct: 160 IDGIPVDVLITGLA-QNRAVEGDHVAITLDPVAHWTRMKGPNVACNPAIGGDSVVREFSE 218
Query: 253 ANGMHSDICKGKSKVDVSYEYSNCT----LLSEKGIHHDDDSSSEAYNQEMIEREGYNYI 308
NG HS K DV + NC+ +L H + S+A N
Sbjct: 219 TNGNHS---WKKGHADVGCRFENCSNAVPVLDRMHPPHKNSGFSQAVN-----------C 264
Query: 309 NGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVG 368
+ + + K + +++ A++R+ AMI S+P++RPTG+V+S+ ++SPRRD IVG
Sbjct: 265 GNGNATVPERNVKDLNDGKSEAARALQRICAMICSHPSRRPTGKVLSVTKKSPRRDAIVG 324
Query: 369 FL-NVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKR 427
FL + +++ + + + K ++++ L PT PK+P MVV LPDS+ +
Sbjct: 325 FLASFSEFPDGEQQKNQMGLKRMNNVASSVTGLFHLLPTDPKFPPMVVSFSTLPDSVIQS 384
Query: 428 LEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFS 487
L GDA E ELVAARIDEWNEE+ +P AHV+ G+GG V+ ++AIL+ENAI + FS
Sbjct: 385 LR-GDAAFEKELVAARIDEWNEENIYPYAHVIRFLGKGGHVKTHMDAILFENAISDAEFS 443
Query: 488 PESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVH 547
PESL+CLP W++PQ+EL +RKDLR FTIDP TA+DLDDA+SI+ LS G RVGVH
Sbjct: 444 PESLACLPDNCWKIPQKELEARKDLREVLSFTIDPPTASDLDDAISIQILSGGTVRVGVH 503
Query: 548 IADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWD 607
IADVSYFV P TALD EAQ RSTSVY L+RKI MLP LSE V SLNPG DRLAFSI WD
Sbjct: 504 IADVSYFVHPETALDAEAQSRSTSVYTLKRKISMLPSRLSEVV-SLNPGTDRLAFSIIWD 562
Query: 608 LNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDV 667
++ G+++ RWIGR+VI SCCKLSYE QD+I + S +++G+FE DV
Sbjct: 563 IDPHGNIISRWIGRSVIFSCCKLSYELVQDLICNEASQARSAISSF---EVHGKFERDDV 619
Query: 668 VRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFM 727
++S++ LYEV+K LK+ RF GAL L+ +K + LFDE G P DS R + F+ EE M
Sbjct: 620 IKSLRGLYEVTKNLKEVRFKGGALSLDTAKLMILFDEDGAPCDSYRYVRNNACFIVEELM 679
Query: 728 LLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQ 787
LLAN +AAE+I+ AFPD ALLRRHP PN+R+ REFEAFC+K+G +LD SSSGQ H SL +
Sbjct: 680 LLANMSAAEIISNAFPDCALLRRHPEPNLRRFREFEAFCAKNGFELDASSSGQLHLSLSR 739
Query: 788 AREKLKDDYVLFDILINYATRPMQLASYFCSGDF--KDDTDWGHYALAFPVYTHFTSPLR 845
+EKL++D V+FDIL+ YA++ MQ A YFC+GD K D DW HYAL+ P+YTHFTSPLR
Sbjct: 740 IKEKLQEDPVMFDILMFYASKQMQSAEYFCTGDLISKKD-DWAHYALSVPLYTHFTSPLR 798
Query: 846 RYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRG------RFLTGIFYDKDAAES 899
RYPD++VHRTLNA +EAE++Y K ++ + R GV+ R TG+ KDA ES
Sbjct: 799 RYPDIIVHRTLNAVIEAEQVYIKQKKF---STGRNGVKASCELMDRCFTGLQLCKDATES 855
Query: 900 LEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVL 957
EG++ LS AA K+ VP ++ L +A HCN+RK A R +DA KLYMW L+K KEV+
Sbjct: 856 EEGKKVLSAAAKKFKVPYSENLGEIAEHCNERKWAGRRAEDAGQKLYMWALIKNKEVV 913
>gi|168042407|ref|XP_001773680.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675068|gb|EDQ61568.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1068
Score = 710 bits (1832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/820 (46%), Positives = 528/820 (64%), Gaps = 50/820 (6%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
+ K+F+ HWS E VN+++E G FKA +RVN+HNR EAY ++G+ D+LI G+ +QNRA
Sbjct: 134 QSKMFSEHWSPEEVNQSIEDGRIFKATFRVNSHNRHEAYVTVDGLPLDLLIDGLQSQNRA 193
Query: 216 VEGDFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSN 275
+EGD V + ++ S W ++KG N S E + +G S +G + V S+
Sbjct: 194 MEGDVVAVMIEPTSAWPRLKGSFNKQSSPESVTI---GDG-GSFTREGLGDIGVGVSSSS 249
Query: 276 CTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMN--- 332
C + + I R G I S ++ + V + G N
Sbjct: 250 CYSIHSE-----------------IGR-GKGSITTTPRSVAEKPDTVCGAPYRVGSNDKV 291
Query: 333 --AIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNR 390
AI L A +SS P KRPT +VV+I+++SPRR+ +VGFL + Q +GG + A K
Sbjct: 292 SAAISSLLAQLSSCPGKRPTAKVVAIVQKSPRRESLVGFLEMPQ---QRGG--RAAGKGL 346
Query: 391 SSLSVPDREYIQ---LTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEW 447
S S R + L P + PKM+V LP ++ KRL+EGD+T+ ELVAAR+D W
Sbjct: 347 SGDSPQKRRNVGTMLLMPVDSRCPKMLVPPNGLPANLLKRLKEGDSTVATELVAARVDTW 406
Query: 448 NEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELL 507
+ +S P A V+ G+GGE+EPQ+ AIL+EN F SL CLP PW++P E+
Sbjct: 407 SVDSYLPYATVVRSLGQGGEIEPQLKAILFENNAHPPDFPQASLDCLPKTPWKIPASEIK 466
Query: 508 SRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQV 567
R DLR++ IF+IDP TA DLDDALS E+L +G RVGVHIADVSYF+ PG+ LD EA
Sbjct: 467 KRVDLRSYRIFSIDPPTARDLDDALSFEKLQNGEIRVGVHIADVSYFITPGSELDKEAAH 526
Query: 568 RSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSC 627
RSTS+Y+ QR +PMLP LL EE+ SLNPGVDRLAFS+ W ++++G+++++W+GRTVI SC
Sbjct: 527 RSTSIYLEQRVLPMLPRLLCEELCSLNPGVDRLAFSVIWTMSASGEILEQWVGRTVINSC 586
Query: 628 CKLSYEHAQDIIDGKF----DVESSNTL---GEGWPQLYGQFEWSDVVRSIKSLYEVSKI 680
KL+YEHAQD+I+G F E+ N+L G+ PQL+G WS+VV + SL++++K
Sbjct: 587 AKLTYEHAQDMIEGVFTDMEGAEARNSLSKSGKPLPQLHGNHSWSEVVSDVLSLHDMAKK 646
Query: 681 LKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR 740
++ R GAL+L NSK F DE GTPYDS + D NF+ EEFMLLAN T A++I+
Sbjct: 647 RRESRIEGGALKLNNSKITFSLDEDGTPYDSSMYMTRDSNFVVEEFMLLANMTVAKIISN 706
Query: 741 AFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFD 800
AFP+SALLRRHP PNMRKLREFE FC K+ LDTSSSG SLE+ ++++ D VL++
Sbjct: 707 AFPESALLRRHPEPNMRKLREFEEFCEKNDFDLDTSSSGALRLSLEKMQDRVSHDPVLYN 766
Query: 801 ILINYATRPMQLASYFCSGDFKD-DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAA 859
IL+ +AT+PMQLA YFC+G+ KD + +WGHYALA P+YTHFTSP+RRYPD++VHR L+AA
Sbjct: 767 ILMLFATKPMQLAKYFCTGELKDKEEEWGHYALACPLYTHFTSPIRRYPDVLVHRMLSAA 826
Query: 860 LEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCAD 919
LEAE++ L + ++ + ++ +++ + AL++AA ++ +P
Sbjct: 827 LEAEEIIGMPESSLSHSR-------QYFSSAKSERGVSDTPVAQNALTIAANRHKLPACS 879
Query: 920 ILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLFS 959
L+ +A HCN+RK+A RNVK+A KLY+W +LKKK L S
Sbjct: 880 DLLGIAAHCNERKMASRNVKEASDKLYLWAMLKKKGGLLS 919
>gi|222623692|gb|EEE57824.1| hypothetical protein OsJ_08422 [Oryza sativa Japonica Group]
Length = 936
Score = 709 bits (1829), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/670 (55%), Positives = 474/670 (70%), Gaps = 35/670 (5%)
Query: 309 NGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVG 368
NG+H ++ K +++ A+ R+ +M+ S P++RPTG+V++II++SPRRD +VG
Sbjct: 130 NGNHDGKKENCGKDLGEGKSEASRALHRICSMVYSNPSRRPTGKVLAIIKKSPRRDTVVG 189
Query: 369 FLNVNQWFNYKGGSRKDAKKNRSSLSVPDREY---------IQLTPTHPKYPKMVVLVKD 419
FL + + +KN+ S+ + I L PT K+P MVV V
Sbjct: 190 FLA-----PFAVCPDPEQQKNQMSMLSKRMNHRASSYFSGLILLLPTDSKFPHMVVNVST 244
Query: 420 LPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYEN 479
LPDS++ LEEGDA ELVAARI +WNEES +P AHV+ + G+GG+V+ ++AIL+EN
Sbjct: 245 LPDSVRNHLEEGDAA--KELVAARISDWNEESLYPCAHVIQLLGKGGQVKTHMDAILFEN 302
Query: 480 AICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSD 539
AI + FSPES+ CLP + W++PQEEL RKDLRN FTIDP TATDLDDA+SIE LS
Sbjct: 303 AISDAEFSPESMECLPDICWKIPQEELEVRKDLRNVLTFTIDPPTATDLDDAISIEMLSG 362
Query: 540 GISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDR 599
GI R+GVHIADVSYFV P TALD EAQ+RSTSVY L+RKI MLP+ LSE++ SLNPGVDR
Sbjct: 363 GIVRIGVHIADVSYFVHPETALDAEAQIRSTSVYTLRRKISMLPLRLSEDLVSLNPGVDR 422
Query: 600 LAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDII--DG-KFDVESSNTLGEGWP 656
L FSI WD++ G++++RWIGRTVI SCCKLSY+ QD+I DG KF +S+++L
Sbjct: 423 LTFSIIWDIDPHGNIINRWIGRTVISSCCKLSYDLVQDLICSDGTKF--KSASSL----- 475
Query: 657 QLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGR 716
Q++G FE DV++S++ LYE+SK LK+ RF GAL LE +K + FDE G P DS R
Sbjct: 476 QVHGIFEQDDVIKSLRCLYEISKNLKEIRFKGGALSLETAKLMIQFDEGGAPCDSFRYER 535
Query: 717 EDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTS 776
D F+ EE MLLAN +AAEVI+ AFP+ ALLRRHP PN+RK REFEAFC+++G +LD S
Sbjct: 536 NDACFIVEELMLLANMSAAEVISNAFPNCALLRRHPEPNLRKSREFEAFCARNGFELDGS 595
Query: 777 SSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDF--KDDTDWGHYALAF 834
SSGQ H SL + +EKLKDD VLFDIL+ YA++ MQ A YFC+ D K D DW HYAL+
Sbjct: 596 SSGQLHLSLSRMKEKLKDDPVLFDILMFYASKQMQSAEYFCTADLISKRD-DWAHYALSV 654
Query: 835 PVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHR-----EGVRGRFLTG 889
P+YTHFTSPLRRYPD++VHRTLNA +EAEK+Y KHRR L N E + G F TG
Sbjct: 655 PLYTHFTSPLRRYPDIIVHRTLNAVIEAEKMYLKHRRSLTGQNGFNTASCEMMHGCF-TG 713
Query: 890 IFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWI 949
+ + KDAAES EG EALS AA K+ VP D L VA HCN+RK A R +DA KLYMW
Sbjct: 714 LQFSKDAAESKEGSEALSAAAKKFKVPSPDNLGEVAEHCNERKWASRRAEDAGQKLYMWA 773
Query: 950 LLKKKEVLFS 959
L+K+KEVL +
Sbjct: 774 LIKRKEVLVA 783
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 63/121 (52%), Gaps = 31/121 (25%)
Query: 158 KIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVE 217
+ F HW +AV EA++ AYC IEG+ DVLITG+A QNRA+E
Sbjct: 49 RFFQSHWPEQAVEEAIK------------------AYCTIEGIPVDVLITGVA-QNRAIE 89
Query: 218 GDFVLIKVDRLSLWAKMKG--FSNNSSIVEDSNL--PTEANGMH--------SDICKGKS 265
GD V + ++ ++ W +MKG + N +I E S + E NG H D+ +GKS
Sbjct: 90 GDLVAMTLEPVAYWTRMKGPNITCNPAIGEGSAVREVGETNGNHDGKKENCGKDLGEGKS 149
Query: 266 K 266
+
Sbjct: 150 E 150
>gi|218191600|gb|EEC74027.1| hypothetical protein OsI_08979 [Oryza sativa Indica Group]
Length = 1010
Score = 703 bits (1814), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/829 (48%), Positives = 518/829 (62%), Gaps = 115/829 (13%)
Query: 158 KIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVE 217
+ F HW +AV EA++ AYC IEG+ DVLITG+A QNRA+E
Sbjct: 117 RFFQSHWPEQAVEEAIK------------------AYCTIEGIPVDVLITGVA-QNRAIE 157
Query: 218 GDFVLIKVDRLSLWAKMKG--FSNNSSIVEDSNL--PTEANGMHSDICKGKSKVDVSYEY 273
GD V + ++ ++ W +MKG + N +I E S + E NG H K + D + +
Sbjct: 158 GDLVAMTLEPVAYWTRMKGPNITCNPAIGEGSAVREVGETNGNHDG---KKGQTDANCRF 214
Query: 274 SNCT----LLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQND 329
NC+ + H + S+A E NGH + ++ K S +++
Sbjct: 215 GNCSNGQPVSDRTHYRHKNSGFSKAVTCE----------NGH-ATVPENCGKDSGEGKSE 263
Query: 330 GMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKN 389
A+ R+ +M+ S P++RPTG+V++II++SPRRD +VGFL + + +KN
Sbjct: 264 ASRALHRICSMVYSNPSRRPTGKVLAIIKKSPRRDTVVGFLA-----PFAVCPDPEQQKN 318
Query: 390 RSSLSVPDREY---------IQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELV 440
+ S+ + I L PT K+P MVV V LPDS++ LEEGDA ELV
Sbjct: 319 QMSMLSKRMNHRASSYFSGLILLLPTDSKFPHMVVNVSTLPDSVRNHLEEGDAA--KELV 376
Query: 441 AARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWE 500
AARI +WNEES +P AHV+ + G+GG+V+ ++AIL+ENAI + FSPES+ CLP + W+
Sbjct: 377 AARISDWNEESLYPCAHVIQLLGKGGQVKTHMDAILFENAISDAEFSPESMECLPDICWK 436
Query: 501 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 560
+PQEEL RKDLRN FTIDP TATDLDDA+SIE LS GI R+GVHIADVSYFV P TA
Sbjct: 437 IPQEELEVRKDLRNVLTFTIDPPTATDLDDAISIEMLSGGIVRIGVHIADVSYFVHPETA 496
Query: 561 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIG 620
LD EAQ+RSTSVY L+RKI MLP LSE++ SLNPGVDRL FSI WD++ G++++RWIG
Sbjct: 497 LDAEAQIRSTSVYTLRRKISMLPSRLSEDLVSLNPGVDRLTFSIIWDIDPHGNIINRWIG 556
Query: 621 RTVIRSCCKLSYEHAQDII--DG-KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEV 677
RTVI SCCKLSY+ QD+I DG KF +S+++L Q++G FE DV++S++ LYE+
Sbjct: 557 RTVISSCCKLSYDLVQDLICSDGTKF--KSASSL-----QVHGIFEQDDVIKSLRCLYEI 609
Query: 678 SKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEV 737
SK LK+ RF GAL LE +K + FDE G P D
Sbjct: 610 SKNLKEIRFKGGALSLETAKLMIQFDEGGAPCD--------------------------- 642
Query: 738 IARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYV 797
RHP PN+RK REFEAFC+++G +LD SSSGQ H SL + +EKLKDD V
Sbjct: 643 ------------RHPEPNLRKSREFEAFCARNGFELDGSSSGQLHLSLSRMKEKLKDDTV 690
Query: 798 LFDILINYATRPMQLASYFCSGDF--KDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRT 855
LFDIL+ YA++ MQ A YFC+ D K D DW HYAL+ P+YTHFTSPLRRYPD++VHRT
Sbjct: 691 LFDILMFYASKQMQSAEYFCTADLISKRD-DWAHYALSVPLYTHFTSPLRRYPDIIVHRT 749
Query: 856 LNAALEAEKLYWKHRRMLPKNN-----HREGVRGRFLTGIFYDKDAAESLEGREALSVAA 910
LNA +EAEK+Y KHRR L N E + G F TG+ + KDAAES EG +ALS AA
Sbjct: 750 LNAVIEAEKMYLKHRRSLTGQNGFNTASCEMMHGCF-TGLQFSKDAAESKEGSDALSAAA 808
Query: 911 LKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLFS 959
K+ VP D L VA HCN+RK A R +DA KLYMW L+K+KEVL +
Sbjct: 809 KKFKVPSPDNLGEVAEHCNERKWASRRAEDAGQKLYMWALIKRKEVLVA 857
>gi|413924505|gb|AFW64437.1| hypothetical protein ZEAMMB73_467009 [Zea mays]
Length = 1045
Score = 703 bits (1814), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/895 (46%), Positives = 553/895 (61%), Gaps = 84/895 (9%)
Query: 85 GASTVTFSSMPTMHINEEESAESGSTQSQLLLATDLCGSIISRSCPEPIANDSSCWAYTN 144
A T SMP MH+ ++ + S + S+SCP P T
Sbjct: 59 AAGPRTVRSMPPMHVGSSAGVDAEAEPS---------AAGTSQSCPLPPTPRP-----TE 104
Query: 145 KDDNPSHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDV 204
+ + + F PHW AV EA++ AYC I+GV DV
Sbjct: 105 APVSRLGRGAPGTRYFQPHWPERAVEEAVK------------------AYCTIDGVSVDV 146
Query: 205 LITGIAAQNRAVEGDFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGK 264
LITG+A QNRAVEGD V I +D ++ W +MKG + + + ++ E + + + K
Sbjct: 147 LITGLA-QNRAVEGDLVAITLDPVAHWTRMKGPNVACNPLIGDSVVCEVSETNRNHSWKK 205
Query: 265 SKVDVSYEYSNCT----LLSEKGIHHDDDSSSEAY-----NQEMIEREGYNYINGHHPST 315
+ D ++ NC+ +L H + S+A N + ER + +G
Sbjct: 206 GQADDGCKFENCSNGVPVLDRTHPPHKNSGFSQAVKCGNGNATIPERNEIDLNDG----- 260
Query: 316 SDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQW 375
+++ A++R+SA I S+P++RPTG+V+SII++SPRRD IVGFL
Sbjct: 261 -----------KSEVARALQRISATIYSHPSRRPTGKVLSIIKKSPRRDAIVGFLASFSE 309
Query: 376 FNYKGGSRKDA----KKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEG 431
F G +K+ + N + SV Y L PT PK+P+MVV LPDS+++ L G
Sbjct: 310 FP-DGEQQKNQMGLNRMNNRTQSVTGLFY--LLPTDPKFPQMVVSFSTLPDSVRQSLR-G 365
Query: 432 DATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL 491
+ ++ ELVAARIDEWNEE+ +P AHV+ G+ G V+ ++AIL+EN IC + FSPESL
Sbjct: 366 NVAVKKELVAARIDEWNEENLYPYAHVIRFLGKVGHVKTHMDAILFENVICDAEFSPESL 425
Query: 492 SCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADV 551
+CLP W++PQ+EL +RKDLR FTIDP TA+DLDDA+SIE LS G R+GVHIADV
Sbjct: 426 ACLPDNCWKIPQKELEARKDLRKVLTFTIDPPTASDLDDAISIEILSGGTVRIGVHIADV 485
Query: 552 SYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSA 611
SYF+ P TALD EAQ RSTSVY L+ KI MLP SE V SLNPGVDRLAFSI WD++
Sbjct: 486 SYFLHPETALDAEAQSRSTSVYTLKHKISMLPSGFSEVV-SLNPGVDRLAFSIIWDIDPH 544
Query: 612 GDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGE-GWPQLYGQFEWSDVVRS 670
G+++ RWIGR++I SCCKLSYE QD+I E+S T E +++G F DV++S
Sbjct: 545 GNLISRWIGRSIIFSCCKLSYELVQDLICN----ETSQTRPEVSSLEVHGIFGRDDVIKS 600
Query: 671 IKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLA 730
++ LYEVSK LK+ RF GAL L+ +K + LFDE G P DS R++ F+ EE MLLA
Sbjct: 601 LRGLYEVSKNLKEIRFKGGALSLDTAKIMILFDEDGDPCDSYRYVRKNACFIVEELMLLA 660
Query: 731 NKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQARE 790
N +AAEVI+ AFPD ALLRRHP PN+RK REFEAFC+K+G +LD SSSGQ H SL + +E
Sbjct: 661 NMSAAEVISNAFPDCALLRRHPEPNLRKSREFEAFCAKNGFELDVSSSGQLHLSLSRIKE 720
Query: 791 KLKDDYVLFDILINYATRPMQLASYFCSGDF--KDDTDWGHYALAFPVYTHFTSPLRRYP 848
KL++D V+FDI++ YA++ MQ A YFC+GD K D DW HYAL+ P+YTHFTSPLRRYP
Sbjct: 721 KLQEDPVMFDIIMFYASKQMQSAEYFCTGDLISKKD-DWAHYALSVPLYTHFTSPLRRYP 779
Query: 849 DLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGR------FLTGIFYDKDAAESLEG 902
D++VHRTLNA +EAE++Y K ++ N GV+ TG+ KDAAES EG
Sbjct: 780 DIIVHRTLNAVIEAEQVYMKQKKSSAGQN---GVKASCELMDMCFTGLQLCKDAAESEEG 836
Query: 903 REALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVL 957
++ALS AA K+ VP ++ L +A HCN+RK A R ++A KLYMW L+K KE +
Sbjct: 837 KKALSAAAKKFKVPSSENLGEIAEHCNERKWAGRRAEEAGQKLYMWALIKNKETV 891
>gi|302811896|ref|XP_002987636.1| hypothetical protein SELMODRAFT_158922 [Selaginella moellendorffii]
gi|300144528|gb|EFJ11211.1| hypothetical protein SELMODRAFT_158922 [Selaginella moellendorffii]
Length = 863
Score = 696 bits (1797), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/818 (46%), Positives = 507/818 (61%), Gaps = 80/818 (9%)
Query: 158 KIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVE 217
+IF HWS+ VNEA++ G F RVNAHNR EAY ++G+ D+LI G AQNRA+E
Sbjct: 8 QIFPEHWSLPKVNEAMQSGRVFSCSLRVNAHNRSEAYATVDGLSVDILIEGACAQNRALE 67
Query: 218 GDFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCT 277
GD V + +D +LW +MKG +NN +D S + V +N +
Sbjct: 68 GDLVALVLDPPNLWPRMKGLNNN----------------RTDRVVTASSIAV----TNQS 107
Query: 278 LLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERL 337
S +G+ S E +E + E N S+ DS +S G A+E++
Sbjct: 108 FSSGEGVQ----VSREIRLEEEVVIESVGSSNQVVESSEDSGSLLSGP----GSTALEKV 159
Query: 338 SAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPD 397
A++ + P KRPTG+VVSI+ +S RRD +VGFL+V P
Sbjct: 160 QALLQATPGKRPTGKVVSILSKSRRRDAVVGFLSVK-------------------FQPPT 200
Query: 398 REYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAH 457
R + LTP K+PKMVVL LP+ I +RL +GD + EL+AA +D W+ SP+P A
Sbjct: 201 RNQMVLTPVDAKFPKMVVLPDSLPEVIAQRLRDGDRKMGNELLAACVDRWDCNSPYPLAI 260
Query: 458 VLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCI 517
+ H G+ GE+E Q AIL+E+A+ + F PE+++CLP VPW +P++EL R+DLR+ +
Sbjct: 261 ITHCLGQAGELEAQTAAILFEHAVHSAEFPPEAMACLPRVPWSIPKKELQRRRDLRSRRV 320
Query: 518 FTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 577
FTIDP TA DLDDALS+E L DG++RVGVHIADVSYFV G+ LD EAQ RSTSVY++++
Sbjct: 321 FTIDPVTARDLDDALSVEHLGDGLTRVGVHIADVSYFVHAGSGLDKEAQQRSTSVYLIEQ 380
Query: 578 KIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQD 637
+PMLP LL EE+ SL PGVDRLAFS+ WDL+S G +V +WIGRT I+SCCKLSY AQ+
Sbjct: 381 VLPMLPRLLCEELCSLQPGVDRLAFSVMWDLDSTGQIVKQWIGRTAIKSCCKLSYGDAQE 440
Query: 638 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 697
IIDG F + P L G F W +V IK+LY ++K L++ R DGALRL+ K
Sbjct: 441 IIDGTFSEK---------PGLSGNFSWQEVAADIKTLYNIAKQLEESRIRDGALRLDTGK 491
Query: 698 PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMR 757
VF D G P+++ + + N L +EFMLLAN + A+VI+RAFPD ALLRRHP P+ R
Sbjct: 492 LVFALDGDGNPHETSFYEQMESNKLVQEFMLLANVSVAKVISRAFPDCALLRRHPEPSSR 551
Query: 758 KLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFC 817
KL EF+ FC KHG L T SS H SLE RE+LKDD VL I+ YAT+PMQ+A YFC
Sbjct: 552 KLLEFQEFCKKHGFVLKTDSSADLHASLEVLREELKDDPVLLSIVTLYATKPMQVAKYFC 611
Query: 818 SGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNN 877
+G KD DWGHYALA PVYTHFTSP+RRYPD+VVHRTL AALEAEK
Sbjct: 612 TGRDKDG-DWGHYALAMPVYTHFTSPIRRYPDIVVHRTLTAALEAEK------------- 657
Query: 878 HREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRN 937
V + LTG + S + E L +AA K+ + + +A HCN+RK+A +N
Sbjct: 658 ----VLNKSLTG----PEDLVSTKDYEVLQLAASKHRISDPAEMALLADHCNERKMASKN 709
Query: 938 VKDACVKLYMWILLKKKEVLFS--CLILYLTSFSTIHV 973
V++A +LY+W +L++++ L S C++ F +++V
Sbjct: 710 VQEATDRLYLWTMLQRRKGLLSDACVVGLGPKFMSLYV 747
>gi|302803113|ref|XP_002983310.1| hypothetical protein SELMODRAFT_445437 [Selaginella moellendorffii]
gi|300148995|gb|EFJ15652.1| hypothetical protein SELMODRAFT_445437 [Selaginella moellendorffii]
Length = 1046
Score = 696 bits (1797), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/818 (46%), Positives = 510/818 (62%), Gaps = 80/818 (9%)
Query: 158 KIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVE 217
+IF HWS+ VNEA++ G F RVNAHNR EAY ++G+ D+LI G AQNRA+E
Sbjct: 191 QIFPEHWSLPKVNEAMQSGRVFSCSLRVNAHNRSEAYATVDGLSVDILIEGACAQNRALE 250
Query: 218 GDFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCT 277
GD V + +D +LW +MKG +NN +D S + V +N +
Sbjct: 251 GDLVALVLDPPNLWPRMKGLNNN----------------RTDRVVTASSIAV----TNQS 290
Query: 278 LLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERL 337
S +G+ S E +E + E N S+ DS+ ++ + G A+E++
Sbjct: 291 FSSGEGVQ----VSREIRLEEEVVIESVGRSNQVVESSEDSSSLLTGT----GSTALEKV 342
Query: 338 SAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPD 397
A++ + P KRPTG+VVSI+ +S RRD +VGFL+V P
Sbjct: 343 QALLQATPGKRPTGKVVSILSKSRRRDAVVGFLSVK-------------------FQPPT 383
Query: 398 REYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAH 457
R + LTP K+PKMVVL LP+ I +RL +GD + EL+AA +D W+ SP+P A
Sbjct: 384 RNQMVLTPVDAKFPKMVVLPDSLPEVIAQRLRDGDRKMGNELLAACVDRWDCNSPYPLAI 443
Query: 458 VLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCI 517
+ H G+ GE+E Q AIL+E+A+ + F PE+++CLP VPW +P++EL R+DLR+ +
Sbjct: 444 ITHCLGQAGELEAQTAAILFEHAVHSAEFPPEAMACLPRVPWSIPEKELQRRRDLRSRRV 503
Query: 518 FTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 577
FTIDP TA DLDDALS+E L DG++RVGVHIADVSYFV G+ LD EAQ RSTSVY++Q+
Sbjct: 504 FTIDPVTARDLDDALSVEHLGDGLTRVGVHIADVSYFVHAGSGLDKEAQQRSTSVYLIQQ 563
Query: 578 KIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQD 637
+PMLP LL EE+ SL PGVDRLAFS+ WDL+S G +V +WIGRT I+SCCKLSY AQ+
Sbjct: 564 VLPMLPRLLCEELCSLQPGVDRLAFSVMWDLDSTGQIVKQWIGRTAIKSCCKLSYGDAQE 623
Query: 638 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 697
I+DG F + P L G F W +V IK+LY ++K L++ R DGALRL+ K
Sbjct: 624 IVDGTFSEK---------PGLSGNFSWQEVAADIKTLYNIAKQLEESRIRDGALRLDTGK 674
Query: 698 PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMR 757
VF D G P+++ + + N L +EFMLLAN + A+VI+RAFPD ALLRRHP P+ R
Sbjct: 675 LVFALDGDGNPHETSFYEQMESNKLVQEFMLLANVSVAKVISRAFPDCALLRRHPEPSSR 734
Query: 758 KLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFC 817
KL EF+ FC KHG L T SS H SLE RE+LKDD VL I+ YAT+PMQ+A YFC
Sbjct: 735 KLLEFQEFCKKHGFVLKTDSSADLHASLEVLREELKDDPVLLSIVTLYATKPMQVAKYFC 794
Query: 818 SGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNN 877
+G KD DWGHYALA PVYTHFTSP+RRYPD+VVHRTL+AALEAEKL K
Sbjct: 795 TGRDKDG-DWGHYALAMPVYTHFTSPIRRYPDIVVHRTLSAALEAEKLLNKS-------- 845
Query: 878 HREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRN 937
LTG + S + E L +AA K+ + + VA HCN+RK+A +N
Sbjct: 846 ---------LTG----PEDLVSTKDYEVLQLAASKHRISDPAEMALVADHCNERKMASKN 892
Query: 938 VKDACVKLYMWILLKKKEVLFS--CLILYLTSFSTIHV 973
V++A +LY+W +L++++ L S C++ F +++V
Sbjct: 893 VQEATDRLYLWTMLQRRKGLLSDACVVGLGPKFMSLYV 930
>gi|296205873|ref|XP_002749939.1| PREDICTED: DIS3-like exonuclease 2 [Callithrix jacchus]
Length = 880
Score = 451 bits (1160), Expect = e-123, Method: Compositional matrix adjust.
Identities = 287/804 (35%), Positives = 403/804 (50%), Gaps = 97/804 (12%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
+F + S E V+E L++G + + R+N EA+ D+ I G+ A+NRA+ G
Sbjct: 49 MFETYMSKEDVSEGLKRGTLIQGILRINPKKFHEAFIPSPDGDRDIFIDGVVARNRALNG 108
Query: 219 DFVLIKVDRLSLWAKMKGFSNNSSI--VEDSNLPTEANGMHS-----DICKGKSKVDVSY 271
D V++K+ W +K +N+ +S+LP E G H C V +
Sbjct: 109 DLVVVKLLPEEQWKVVKPENNDKETEGTYESDLPEELCGHHLPQQSLKSCNDSPDVIIEA 168
Query: 272 EYSNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGM 331
++ GI + + +G +G P T D T +S +
Sbjct: 169 QFDGSDSEDGHGIIQNVLVDGVKKLSVCVSEKGKE--DGDAPVTKDETTCISQDTRALPE 226
Query: 332 NAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRS 391
+++R + +VV I+E+ R GFL + A KN
Sbjct: 227 KSLQR-------------SAKVVYILEKKHSR-AATGFLKLL------------ADKNSE 260
Query: 392 SLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEES 451
R+Y +P+ + P++ V +KD P R ++ T L RI +W E+
Sbjct: 261 LF----RKYALFSPSDHRVPRIYVPLKDCPHDFVARPKDYANT----LFICRIVDWKEDC 312
Query: 452 PFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEELLSRK 510
F + G+ GE+EP+ IL E + S FS E L CLP +PW +P EE R+
Sbjct: 313 NFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLECLPQGLPWTIPPEEFSKRR 372
Query: 511 DLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRST 570
DLR CIFTIDPSTA DLDDALS + L+DG VGVHIADVSYFV G+ LD A R+T
Sbjct: 373 DLRKDCIFTIDPSTARDLDDALSCKPLADGSFEVGVHIADVSYFVPEGSDLDKVAAERAT 432
Query: 571 SVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKL 630
SVY++Q+ +PMLP LL EE+ SLNP D+L FS+ W L AG ++D W GRT+IRSC KL
Sbjct: 433 SVYLVQKVVPMLPRLLCEELCSLNPMSDKLTFSVIWTLTPAGKILDEWFGRTIIRSCTKL 492
Query: 631 SYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGA 690
SYEHAQ +I+ + L P + + +V +++ +L+ ++K L+ +RF DGA
Sbjct: 493 SYEHAQSMIESPTEKIPVTEL----PPISPEHSSEEVHQAVLNLHGIAKRLRQQRFEDGA 548
Query: 691 LRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLR 749
LRL+ K F D E G P + D N L EEFMLLAN A I RAFP+ ALLR
Sbjct: 549 LRLDQLKLAFTLDHETGLPQGCHIYEYRDSNKLVEEFMLLANMAVAHKIHRAFPEQALLR 608
Query: 750 RHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRP 809
RHP P R L + FC + GL +D SS+G ++SL Q K ++LIN +RP
Sbjct: 609 RHPPPQTRMLNDLMEFCDQMGLPMDFSSAGALNKSLTQTFGDDKHSLARKEVLINMCSRP 668
Query: 810 MQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKH 869
MQ+A YFCSG +D + HYAL P+YTHFTSP+RR+ D++VHR L AAL
Sbjct: 669 MQMALYFCSGLLQDPAQFRHYALNVPLYTHFTSPIRRFADVLVHRLLAAALGY------- 721
Query: 870 RRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCN 929
RE L +A D L A HCN
Sbjct: 722 ---------------------------------REQLDLA--------PDTLQKQADHCN 740
Query: 930 DRKLACRNVKDACVKLYMWILLKK 953
DR++A + V++ L+ +L+K+
Sbjct: 741 DRRMASKRVQELSTGLFFAVLVKE 764
>gi|395823260|ref|XP_003784908.1| PREDICTED: DIS3-like exonuclease 2 [Otolemur garnettii]
Length = 884
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 291/803 (36%), Positives = 409/803 (50%), Gaps = 95/803 (11%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
+F + S E V+E L+KG + + R+N EA+ D+ I G+ A+NRA+ G
Sbjct: 49 VFETYMSKEEVSEGLKKGTLIQGVLRINPKKFHEAFIPSPDGDRDIFIDGVVARNRALNG 108
Query: 219 DFVLIKVDRLSLWAKMKGFSNN--SSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNC 276
D V++K+ W +K N+ + V DS+LP E G H KS Y++
Sbjct: 109 DLVVVKLLPEEQWKIIKPEINDKETEAVYDSDLPEELCGHHIPQQSLKS-------YNDS 161
Query: 277 TLLSEKGIHHDDDSSSEAYNQEMIEREGYNYING--HHPSTSDSTEKVSSSQQNDGMNAI 334
+ + D DS N + + +G ++ H D+ V +
Sbjct: 162 PDVIIEAQFDDSDSEDGHGNTQNVLVDGVKKLSVCVHEKGKEDAGVLVKKDEDT------ 215
Query: 335 ERLSAMISSYPTK--RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSS 392
+S + P K + + +VV I E+ R GFL + A KN
Sbjct: 216 -FMSQDTRALPEKSLQRSAKVVYISEKKHSR-AATGFLKLL------------ADKNSEL 261
Query: 393 LSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESP 452
R+Y +P+ + P++ V +KD P R ++ T L RI +W E+S
Sbjct: 262 F----RKYALFSPSDHRVPRVYVPLKDCPQDFVTRPKDYANT----LFICRIVDWKEDSN 313
Query: 453 FPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEELLSRKD 511
F + G+ GE+EP+ IL E + S FS E L CLP +PW +P EE RKD
Sbjct: 314 FALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLECLPQGLPWTIPPEEFSKRKD 373
Query: 512 LRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTS 571
LR +C+FTIDPSTA DLDDALS + L+DG VGVHIADVSYF+ G+ LD A R+TS
Sbjct: 374 LRQYCVFTIDPSTARDLDDALSCKPLADGNFEVGVHIADVSYFIPEGSDLDRVAAERATS 433
Query: 572 VYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLS 631
VY++Q+ +PMLP LL EE+ SLNP D+L FS+ W L G ++D W GRT+IRSC KLS
Sbjct: 434 VYLVQKVVPMLPRLLCEELCSLNPMTDKLTFSVIWTLTPKGKILDEWFGRTIIRSCTKLS 493
Query: 632 YEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGAL 691
YEHAQ +I+ + L P + + +V ++I +L+E++K L+ +RF DGAL
Sbjct: 494 YEHAQSMIESPTERIPEKEL----PPISPEHSSKEVHQAILNLHEIAKQLRQQRFVDGAL 549
Query: 692 RLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRR 750
RL+ K F D E G P + D N L EEFMLLAN A I RAFP+ ALLRR
Sbjct: 550 RLDQLKLAFTLDHETGLPQGCHIYEYRDSNKLVEEFMLLANMAVAHKIYRAFPERALLRR 609
Query: 751 HPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPM 810
HP P + L + FC++ GL +D SS+G ++SL + K ++L N +RPM
Sbjct: 610 HPPPQTKMLDDLIEFCNQMGLPMDFSSAGALNKSLTKTFGNDKYSLARKEVLTNMCSRPM 669
Query: 811 QLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR 870
Q+A YFCSG +D + HYAL P+YTHFTSP+RR+ D++VHR L AAL
Sbjct: 670 QMAVYFCSGLLQDRAQFQHYALNVPLYTHFTSPIRRFADVLVHRLLAAAL---------- 719
Query: 871 RMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCND 930
G R R +E D L A HCND
Sbjct: 720 ----------GYRER------------PDVE----------------PDALQKQADHCND 741
Query: 931 RKLACRNVKDACVKLYMWILLKK 953
R++A + V++ L+ IL+K+
Sbjct: 742 RRMASKRVQELSTGLFFAILVKE 764
>gi|397502559|ref|XP_003821921.1| PREDICTED: DIS3-like exonuclease 2 [Pan paniscus]
Length = 889
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 289/809 (35%), Positives = 407/809 (50%), Gaps = 107/809 (13%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
IF + S E V+E L++G + + R+N EA+ D+ I G+ A+NRA+ G
Sbjct: 49 IFETYMSKEDVSEGLKRGTLIQGVLRINPKKFHEAFIPSPDGDRDIFIDGVVARNRALNG 108
Query: 219 DFVLIKVDRLSLWAKMKGFSNN--SSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNC 276
D V++K+ W +K SN+ + +S++P E G H KS D +
Sbjct: 109 DLVVVKLLPEEHWKVVKPESNDKETEAAYESDIPEELCGHHLLQQSLKSYND------SP 162
Query: 277 TLLSEKGIHHDDDSSSEAYNQEMIEREGYNYI----------NGHHPSTSDSTEKVSSSQ 326
++ E D Q ++ +G + +G P T D T +S
Sbjct: 163 DVIVEAQFDGSDSEDGHGITQNVL-VDGVKKLSVCVSEKGREDGDAPVTKDETTCISQDT 221
Query: 327 QNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDA 386
+ +++R + +VV I+E+ R GFL + A
Sbjct: 222 RALSEKSLQR-------------SAKVVYILEKKHSR-AATGFLKLL------------A 255
Query: 387 KKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDE 446
KN R+Y +P+ + P++ V +KD P R ++ T L RI +
Sbjct: 256 DKNSELF----RKYALFSPSDHRVPRIYVPLKDCPQDFVARPKDYANT----LFICRIVD 307
Query: 447 WNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEE 505
W E+ F + G+ GE+EP+ IL E + S FS E L CLP +PW VP EE
Sbjct: 308 WKEDCNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLECLPQGLPWTVPPEE 367
Query: 506 LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEA 565
R+DLR CIFTIDPSTA DLDDALS + L+DG +VGVHIADVSYFV G+ LD A
Sbjct: 368 FSKRRDLRKDCIFTIDPSTARDLDDALSCKPLADGNFKVGVHIADVSYFVPEGSDLDKVA 427
Query: 566 QVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIR 625
R+TSVY++Q+ +PMLP LL EE+ SLNP D+L FS+ W L G ++D W GRT+IR
Sbjct: 428 AERATSVYLVQKVVPMLPRLLCEELCSLNPMSDKLTFSVIWTLTPEGKILDEWFGRTIIR 487
Query: 626 SCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKR 685
SC KLSYEHAQ +I+ + + L P + + +V +++ +L+ ++K L+ +R
Sbjct: 488 SCTKLSYEHAQSMIESSTEKIPAKEL----PPISPEHSSEEVHQAVLNLHGIAKQLRQQR 543
Query: 686 FTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPD 744
F DGALRL+ K F D E G P + + N L EEFMLLAN A I RAFP+
Sbjct: 544 FVDGALRLDQLKLAFTLDHETGLPQGCHIYEYRESNKLVEEFMLLANMAVAHKIHRAFPE 603
Query: 745 SALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN 804
ALLRRHP P R L + FC + GL +D SS+G ++SL Q K ++L N
Sbjct: 604 QALLRRHPPPQTRMLSDLVEFCDQMGLPVDFSSAGALNKSLTQTFGDDKYSLARKEVLTN 663
Query: 805 YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
+RPMQ+A YFCSG +D + HYAL P+YTHFTSP+RR+ D++VHR L AAL
Sbjct: 664 MCSRPMQMALYFCSGLLQDPAQFRHYALNVPLYTHFTSPIRRFADVLVHRLLAAAL---- 719
Query: 865 LYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNV 924
G R R D A D L
Sbjct: 720 ----------------GYRERL--------DMA--------------------PDTLQKQ 735
Query: 925 ATHCNDRKLACRNVKDACVKLYMWILLKK 953
A HCNDR++A + V++ L+ +L+K+
Sbjct: 736 ADHCNDRRMASKRVQELSTSLFFAVLVKE 764
>gi|332815690|ref|XP_003309564.1| PREDICTED: LOW QUALITY PROTEIN: DIS3-like exonuclease 2 [Pan
troglodytes]
gi|410221318|gb|JAA07878.1| DIS3 mitotic control homolog-like 2 [Pan troglodytes]
gi|410262418|gb|JAA19175.1| DIS3 mitotic control homolog-like 2 [Pan troglodytes]
gi|410305198|gb|JAA31199.1| DIS3 mitotic control homolog-like 2 [Pan troglodytes]
gi|410349225|gb|JAA41216.1| DIS3 mitotic control homolog-like 2 [Pan troglodytes]
Length = 887
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 289/809 (35%), Positives = 407/809 (50%), Gaps = 107/809 (13%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
IF + S E V+E L++G + + R+N EA+ D+ I G+ A+NRA+ G
Sbjct: 49 IFETYMSKEDVSEGLKRGTLIQGVLRINPKKFHEAFIPSPDGDRDIFIDGVVARNRALNG 108
Query: 219 DFVLIKVDRLSLWAKMKGFSNN--SSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNC 276
D V++K+ W +K SN+ + +S++P E G H KS D +
Sbjct: 109 DLVVVKLLPEEHWKVVKPESNDKETEAAYESDIPEELCGHHLLQQSLKSYND------SP 162
Query: 277 TLLSEKGIHHDDDSSSEAYNQEMIEREGYNYI----------NGHHPSTSDSTEKVSSSQ 326
++ E D Q ++ +G + +G P T D T +S
Sbjct: 163 DVIVEAQFDGSDSEDGHGITQNVL-VDGVKKLSVCVSEKGREDGDAPVTKDETTCISQDT 221
Query: 327 QNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDA 386
+ +++R + +VV I+E+ R GFL + A
Sbjct: 222 RALSEKSLQR-------------SAKVVYILEKKHSR-AATGFLKLL------------A 255
Query: 387 KKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDE 446
KN R+Y +P+ + P++ V +KD P R ++ T L RI +
Sbjct: 256 DKNSELF----RKYALFSPSDHRVPRIYVPLKDCPQDFVARPKDYANT----LFICRIVD 307
Query: 447 WNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEE 505
W E+ F + G+ GE+EP+ IL E + S FS E L CLP +PW VP EE
Sbjct: 308 WKEDCNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLECLPQGLPWTVPPEE 367
Query: 506 LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEA 565
R+DLR CIFTIDPSTA DLDDALS + L+DG +VGVHIADVSYFV G+ LD A
Sbjct: 368 FSKRRDLRKDCIFTIDPSTARDLDDALSCKPLADGNFKVGVHIADVSYFVPEGSDLDKVA 427
Query: 566 QVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIR 625
R+TSVY++Q+ +PMLP LL EE+ SLNP D+L FS+ W L G ++D W GRT+IR
Sbjct: 428 AERATSVYLVQKVVPMLPRLLCEELCSLNPMSDKLTFSVIWTLTPEGKILDEWFGRTIIR 487
Query: 626 SCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKR 685
SC KLSYEHAQ +I+ + + L P + + +V +++ +L+ ++K L+ +R
Sbjct: 488 SCTKLSYEHAQSMIESSTEKIPAKEL----PPISPEHSSEEVHQAVLNLHGIAKQLRQQR 543
Query: 686 FTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPD 744
F DGALRL+ K F D E G P + + N L EEFMLLAN A I RAFP+
Sbjct: 544 FVDGALRLDQLKLAFTLDHETGLPQGCHIYEYRESNKLVEEFMLLANMAVAHKIHRAFPE 603
Query: 745 SALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN 804
ALLRRHP P R L + FC + GL +D SS+G ++SL Q K ++L N
Sbjct: 604 QALLRRHPPPQTRMLSDLVEFCDQMGLPVDFSSAGALNKSLTQTFGDDKYSLARKEVLTN 663
Query: 805 YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
+RPMQ+A YFCSG +D + HYAL P+YTHFTSP+RR+ D++VHR L AAL
Sbjct: 664 MCSRPMQMALYFCSGLLQDPAQFRHYALNVPLYTHFTSPIRRFADVLVHRLLAAAL---- 719
Query: 865 LYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNV 924
G R R D A D L
Sbjct: 720 ----------------GYRERL--------DMA--------------------PDTLQKQ 735
Query: 925 ATHCNDRKLACRNVKDACVKLYMWILLKK 953
A HCNDR++A + V++ L+ +L+K+
Sbjct: 736 ADHCNDRRMASKRVQELSTSLFFAVLVKE 764
>gi|134288890|ref|NP_689596.4| DIS3-like exonuclease 2 isoform 1 [Homo sapiens]
gi|296439471|sp|Q8IYB7.4|DI3L2_HUMAN RecName: Full=DIS3-like exonuclease 2
gi|119591394|gb|EAW70988.1| hCG2013107, isoform CRA_c [Homo sapiens]
Length = 885
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 288/809 (35%), Positives = 407/809 (50%), Gaps = 107/809 (13%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
IF + S E V+E L++G + + R+N EA+ D+ I G+ A+NRA+ G
Sbjct: 49 IFETYMSKEDVSEGLKRGTLIQGVLRINPKKFHEAFIPSPDGDRDIFIDGVVARNRALNG 108
Query: 219 DFVLIKVDRLSLWAKMKGFSNN--SSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNC 276
D V++K+ W +K SN+ + +S++P E G H KS D +
Sbjct: 109 DLVVVKLLPEEHWKVVKPESNDKETEAAYESDIPEELCGHHLPQQSLKSYND------SP 162
Query: 277 TLLSEKGIHHDDDSSSEAYNQEMIEREGYNYI----------NGHHPSTSDSTEKVSSSQ 326
++ E D Q ++ +G + +G P T D T +S
Sbjct: 163 DVIVEAQFDGSDSEDGHGITQNVL-VDGVKKLSVCVSEKGREDGDAPVTKDETTCISQDT 221
Query: 327 QNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDA 386
+ +++R + +VV I+E+ R GFL + A
Sbjct: 222 RALSEKSLQR-------------SAKVVYILEKKHSR-AATGFLKLL------------A 255
Query: 387 KKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDE 446
KN R+Y +P+ + P++ V +KD P R ++ T L RI +
Sbjct: 256 DKNSELF----RKYALFSPSDHRVPRIYVPLKDCPQDFVARPKDYANT----LFICRIVD 307
Query: 447 WNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEE 505
W E+ F + G+ GE+EP+ IL E + S FS E L CLP +PW +P EE
Sbjct: 308 WKEDCNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLECLPQGLPWTIPPEE 367
Query: 506 LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEA 565
R+DLR CIFTIDPSTA DLDDALS + L+DG +VGVHIADVSYFV G+ LD A
Sbjct: 368 FSKRRDLRKDCIFTIDPSTARDLDDALSCKPLADGNFKVGVHIADVSYFVPEGSDLDKVA 427
Query: 566 QVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIR 625
R+TSVY++Q+ +PMLP LL EE+ SLNP D+L FS+ W L G ++D W GRT+IR
Sbjct: 428 AERATSVYLVQKVVPMLPRLLCEELCSLNPMSDKLTFSVIWTLTPEGKILDEWFGRTIIR 487
Query: 626 SCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKR 685
SC KLSYEHAQ +I+ + + L P + + +V +++ +L+ ++K L+ +R
Sbjct: 488 SCTKLSYEHAQSMIESPTEKIPAKEL----PPISPEHSSEEVHQAVLNLHGIAKQLRQQR 543
Query: 686 FTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPD 744
F DGALRL+ K F D E G P + + N L EEFMLLAN A I RAFP+
Sbjct: 544 FVDGALRLDQLKLAFTLDHETGLPQGCHIYEYRESNKLVEEFMLLANMAVAHKIHRAFPE 603
Query: 745 SALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN 804
ALLRRHP P R L + FC + GL +D SS+G ++SL Q K ++L N
Sbjct: 604 QALLRRHPPPQTRMLSDLVEFCDQMGLPVDFSSAGALNKSLTQTFGDDKYSLARKEVLTN 663
Query: 805 YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
+RPMQ+A YFCSG +D + HYAL P+YTHFTSP+RR+ D++VHR L AAL
Sbjct: 664 MCSRPMQMALYFCSGLLQDPAQFRHYALNVPLYTHFTSPIRRFADVLVHRLLAAAL---- 719
Query: 865 LYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNV 924
G R R D A D L
Sbjct: 720 ----------------GYRERL--------DMA--------------------PDTLQKQ 735
Query: 925 ATHCNDRKLACRNVKDACVKLYMWILLKK 953
A HCNDR++A + V++ L+ +L+K+
Sbjct: 736 ADHCNDRRMASKRVQELSTSLFFAVLVKE 764
>gi|351697199|gb|EHB00118.1| DIS3-like exonuclease 2, partial [Heterocephalus glaber]
Length = 881
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 292/807 (36%), Positives = 408/807 (50%), Gaps = 103/807 (12%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
IF + S E V++ L++G + + R+N EA+ D+ I G+ A+NRA+ G
Sbjct: 50 IFETYLSKEDVSQGLKRGTLIQGVLRINPKKFHEAFIPSPDGDRDIFIDGVVARNRALNG 109
Query: 219 DFVLIKVDRLSLWAKMKGFSNN--SSIVEDSNLPTEANGMH-----SDICKGKSKVDVSY 271
D V++K+ W K S++ + +S+ P E G H S C + V V
Sbjct: 110 DLVVVKLLPEEQWKVFKPESSDKEAEAAYESDFPEELCGHHLPKQSSKGCNDSTDVIVEA 169
Query: 272 EYSNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPST---SDSTEKVSSSQQN 328
+Y DDS SE NGH S +D +K+S +
Sbjct: 170 QY--------------DDSDSE---------------NGHSNSQNALADGVKKLSVCAHD 200
Query: 329 DGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKK 388
G + S P P R +S E+S +R V ++ + G K +
Sbjct: 201 KGKDDASAHVTKDESTPMS-PDTRALS--EKSLQRSAKVVYILEKKHSRAATGILKLLAE 257
Query: 389 NRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWN 448
S L R+Y +P+ + P++ V +KD P R ++ T L RI +W
Sbjct: 258 KNSDLF---RKYALFSPSDHRVPRIYVPLKDCPQDFVTRPKDYSTT----LFICRIVDWK 310
Query: 449 EESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEELL 507
E+S F + G+ GE+EP+ IL E + S FS E L CLP +PW +P EE+
Sbjct: 311 EDSNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLECLPRSLPWTIPPEEVS 370
Query: 508 SRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQV 567
R+DLR C+FTIDP TA DLDDALS L+DG +VGVHIADVSYFV G+ LD A
Sbjct: 371 KRRDLRKDCVFTIDPLTARDLDDALSCRPLADGTFQVGVHIADVSYFVPEGSQLDKVAAE 430
Query: 568 RSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSC 627
R+TSVY++Q+ +PMLP LL EE+ SLNP D+L FS+ W L S G +++ W GRT+IRSC
Sbjct: 431 RATSVYLVQKVVPMLPRLLCEELCSLNPMTDKLTFSVVWTLTSEGKILEEWFGRTIIRSC 490
Query: 628 CKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFT 687
KLSYEHAQ +I+ + L P + + +V ++I +L+ ++K L+ +RFT
Sbjct: 491 TKLSYEHAQSMIERPAERIPEQEL----PPISPEHCIEEVHQAILNLHRIAKWLRQQRFT 546
Query: 688 DGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSA 746
DGALRL+ K F D E G P + D N L EEFMLLAN A I RAFP+ A
Sbjct: 547 DGALRLDQLKLAFTLDHETGLPQGCHIYEYRDSNRLVEEFMLLANMAVAHRIHRAFPEQA 606
Query: 747 LLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYA 806
LLRRHP P + L + FCS+ GL +D SS+G ++SL + K ++L N
Sbjct: 607 LLRRHPPPQTKMLGDLVEFCSQMGLAVDVSSAGALNKSLTRIFGADKYSRARKEVLTNMF 666
Query: 807 TRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
+RPMQ+A YFCSG +D + HYAL P+YTHFTSP+RR+ D++VHR L AAL
Sbjct: 667 SRPMQMALYFCSGVLQDPAQFRHYALNVPLYTHFTSPIRRFADVLVHRLLAAAL------ 720
Query: 867 WKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVAT 926
G R R DA S L A
Sbjct: 721 --------------GYRERL--------DAEPS--------------------ALQKQAD 738
Query: 927 HCNDRKLACRNVKDACVKLYMWILLKK 953
CNDR++A + V++ L+ +L+K+
Sbjct: 739 LCNDRRMASKRVQELSTGLFFAVLVKE 765
>gi|119591396|gb|EAW70990.1| hCG2013107, isoform CRA_e [Homo sapiens]
Length = 817
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 287/808 (35%), Positives = 406/808 (50%), Gaps = 107/808 (13%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
IF + S E V+E L++G + + R+N EA+ D+ I G+ A+NRA+ G
Sbjct: 49 IFETYMSKEDVSEGLKRGTLIQGVLRINPKKFHEAFIPSPDGDRDIFIDGVVARNRALNG 108
Query: 219 DFVLIKVDRLSLWAKMKGFSNN--SSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNC 276
D V++K+ W +K SN+ + +S++P E G H KS D +
Sbjct: 109 DLVVVKLLPEEHWKVVKPESNDKETEAAYESDIPEELCGHHLPQQSLKSYND------SP 162
Query: 277 TLLSEKGIHHDDDSSSEAYNQEMIEREGYNYI----------NGHHPSTSDSTEKVSSSQ 326
++ E D Q ++ +G + +G P T D T +S
Sbjct: 163 DVIVEAQFDGSDSEDGHGITQNVLV-DGVKKLSVCVSEKGREDGDAPVTKDETTCISQDT 221
Query: 327 QNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDA 386
+ +++R + +VV I+E+ R GFL + A
Sbjct: 222 RALSEKSLQR-------------SAKVVYILEKKHSR-AATGFLKLL------------A 255
Query: 387 KKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDE 446
KN R+Y +P+ + P++ V +KD P R ++ T L RI +
Sbjct: 256 DKNSELF----RKYALFSPSDHRVPRIYVPLKDCPQDFVARPKDYANT----LFICRIVD 307
Query: 447 WNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEE 505
W E+ F + G+ GE+EP+ IL E + S FS E L CLP +PW +P EE
Sbjct: 308 WKEDCNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLECLPQGLPWTIPPEE 367
Query: 506 LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEA 565
R+DLR CIFTIDPSTA DLDDALS + L+DG +VGVHIADVSYFV G+ LD A
Sbjct: 368 FSKRRDLRKDCIFTIDPSTARDLDDALSCKPLADGNFKVGVHIADVSYFVPEGSDLDKVA 427
Query: 566 QVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIR 625
R+TSVY++Q+ +PMLP LL EE+ SLNP D+L FS+ W L G ++D W GRT+IR
Sbjct: 428 AERATSVYLVQKVVPMLPRLLCEELCSLNPMSDKLTFSVIWTLTPEGKILDEWFGRTIIR 487
Query: 626 SCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKR 685
SC KLSYEHAQ +I+ + + L P + + +V +++ +L+ ++K L+ +R
Sbjct: 488 SCTKLSYEHAQSMIESPTEKIPAKEL----PPISPEHSSEEVHQAVLNLHGIAKQLRQQR 543
Query: 686 FTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPD 744
F DGALRL+ K F D E G P + + N L EEFMLLAN A I RAFP+
Sbjct: 544 FVDGALRLDQLKLAFTLDHETGLPQGCHIYEYRESNKLVEEFMLLANMAVAHKIHRAFPE 603
Query: 745 SALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN 804
ALLRRHP P R L + FC + GL +D SS+G ++SL Q K ++L N
Sbjct: 604 QALLRRHPPPQTRMLSDLVEFCDQMGLPVDFSSAGALNKSLTQTFGDDKYSLARKEVLTN 663
Query: 805 YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
+RPMQ+A YFCSG +D + HYAL P+YTHFTSP+RR+ D++VHR L AAL
Sbjct: 664 MCSRPMQMALYFCSGLLQDPAQFRHYALNVPLYTHFTSPIRRFADVLVHRLLAAALGY-- 721
Query: 865 LYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNV 924
RE L +A D L
Sbjct: 722 --------------------------------------RERLDMA--------PDTLQKQ 735
Query: 925 ATHCNDRKLACRNVKDACVKLYMWILLK 952
A HCNDR++A + V++ L+ +L+K
Sbjct: 736 ADHCNDRRMASKRVQELSTSLFFAVLVK 763
>gi|403291368|ref|XP_003936767.1| PREDICTED: DIS3-like exonuclease 2 [Saimiri boliviensis
boliviensis]
Length = 887
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 285/804 (35%), Positives = 402/804 (50%), Gaps = 97/804 (12%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
+F + S E V+E L++G + + R+N EA+ D+ I G+ A+NRA+ G
Sbjct: 49 MFETYMSKEDVSEGLKRGTLIQGILRINPKKFHEAFIPSPDGDRDIFIDGVVARNRALNG 108
Query: 219 DFVLIKVDRLSLWAKMKGFSNNSSI--VEDSNLPTEANGMHS-----DICKGKSKVDVSY 271
D V++K+ W +K SN+ +S+LP E G H C V +
Sbjct: 109 DLVVVKLLPEEQWKVVKPESNDKETEGTCESDLPEELCGHHLPQQSLKSCNDSPDVIIEA 168
Query: 272 EYSNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGM 331
++ GI + + +G +G P T D T +S +
Sbjct: 169 QFDGSDSEDGHGITQNVLVDGVKKLSVYVSEKGKE--DGDVPVTKDETVCISQDARALPE 226
Query: 332 NAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRS 391
+++R + +VV I+E+ R GFL + A KN
Sbjct: 227 KSLQR-------------SAKVVYILEKKHSR-AATGFLKLL------------ADKNSE 260
Query: 392 SLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEES 451
R+Y +P+ + P++ V +KD P R ++ T L RI +W E+
Sbjct: 261 LF----RKYALFSPSDHRVPRIYVPLKDCPHDFVARPKDYANT----LFICRIVDWKEDC 312
Query: 452 PFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEELLSRK 510
F + G+ GE+EP+ IL E + + FS E L CLP +PW +P EE R+
Sbjct: 313 NFALGQLAKSLGQAGEIEPETEGILTEYGVDFTDFSSEVLECLPQGLPWTIPPEEFSKRR 372
Query: 511 DLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRST 570
DLR CIFTIDPSTA DLDDALS + L+DG VGVHIADVSYFV G+ LD A R+T
Sbjct: 373 DLRKDCIFTIDPSTARDLDDALSCKPLADGNFEVGVHIADVSYFVPEGSDLDKVAAERAT 432
Query: 571 SVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKL 630
SVY++Q+ +PMLP LL EE+ SLNP D+L FS+ W L G ++D W GRTVIRSC KL
Sbjct: 433 SVYLVQKVVPMLPRLLCEELCSLNPMSDKLTFSVIWTLTPGGKILDEWFGRTVIRSCTKL 492
Query: 631 SYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGA 690
SYEHAQ +I+ + + L P + + +V +++ +L+ ++K L+ +RF DGA
Sbjct: 493 SYEHAQSMIESPTEKIPATEL----PPISPEHSSEEVHQAVLNLHGIAKRLRQQRFADGA 548
Query: 691 LRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLR 749
LRL+ K F D E G P + D N L EEFMLLAN A I RAFP+ ALLR
Sbjct: 549 LRLDQLKLAFTLDHETGLPQGCHIYEYRDSNKLVEEFMLLANMAVAHKIHRAFPEQALLR 608
Query: 750 RHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRP 809
RHP P R L + FC + GL +D SS+G ++SL Q K ++L N +RP
Sbjct: 609 RHPPPQTRMLNDLMEFCDQMGLPVDFSSAGALNKSLTQTFGDDKYSLARKEVLTNMCSRP 668
Query: 810 MQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKH 869
MQ+A YFCSG +D + HYAL P+YTHFTSP+RR+ D++VHR L
Sbjct: 669 MQMALYFCSGLLQDPAQFRHYALNVPLYTHFTSPIRRFADVLVHRLL------------- 715
Query: 870 RRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCN 929
A +L RE L +A D L A HCN
Sbjct: 716 ---------------------------AATLGYRERLDLA--------PDTLQKQADHCN 740
Query: 930 DRKLACRNVKDACVKLYMWILLKK 953
DR++A + V++ L+ +L+K+
Sbjct: 741 DRRMASKRVQELSTGLFFAVLVKE 764
>gi|305855184|ref|NP_001182262.1| DIS3-like exonuclease 2 [Sus scrofa]
gi|285818458|gb|ADC38902.1| DIS3 mitotic control-like protein [Sus scrofa]
Length = 883
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 283/804 (35%), Positives = 402/804 (50%), Gaps = 97/804 (12%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
IF + S E V+E L++G + + R+N EA+ D+ I G+ A+NRA+ G
Sbjct: 49 IFETYMSKEDVSEGLKRGTLIQGVLRINPKKFHEAFIPSPDGDRDIFIDGVVARNRALNG 108
Query: 219 DFVLIKVDRLSLWAKMKGFSNNSSI--VEDSNLPTEANGMHS-----DICKGKSKVDVSY 271
D V++K+ W +K SN+ +S+LP E G H C V +
Sbjct: 109 DLVVVKLLPEEQWKVIKPESNDKETEGAYESDLPEELCGSHLLQQSLKACNDSPDVIIEA 168
Query: 272 EYSNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGM 331
++ + SE G + +S + + + P T D +S +
Sbjct: 169 QFDDSD--SEDGHGNTPNSLVDGVKKLSVCVHEKGEEGAGAPVTKDENTLMSQDARASPE 226
Query: 332 NAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRS 391
+++R + +VV I+E+ R GFL + A KN
Sbjct: 227 KSLQR-------------SAKVVYILEKKHSR-AATGFLKLL------------ADKNSE 260
Query: 392 SLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEES 451
R+Y +P+ + P++ V +KD P R ++ T L RI +W E+S
Sbjct: 261 LF----RKYALFSPSDHRVPRIYVPLKDCPQDFVTRPKDYANT----LFICRIVDWKEDS 312
Query: 452 PFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEELLSRK 510
F + G+ GE+EP+ IL E + S F E L CLP +PW +P EE R+
Sbjct: 313 NFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFPSEVLECLPHGLPWTIPPEEFRKRR 372
Query: 511 DLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRST 570
DLR CIFTIDPSTA DLDDALS + L+DG VGVHIADVSYFV G++LD A R+T
Sbjct: 373 DLRKDCIFTIDPSTARDLDDALSCKSLADGNFEVGVHIADVSYFVPEGSSLDSVAAERAT 432
Query: 571 SVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKL 630
SVY++Q+ +PMLP LL EE+ SLNP D+L FS+ W L G ++ W GRTVIRSC KL
Sbjct: 433 SVYLVQKVVPMLPRLLCEELCSLNPMTDKLTFSVIWTLTPRGKILSEWFGRTVIRSCTKL 492
Query: 631 SYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGA 690
SYEHAQ +I+ L P+ G+ +V R++ +L+ ++K L+ +RF DGA
Sbjct: 493 SYEHAQSMIESPTRKIPEKELPPISPEHSGE----EVHRAVLTLHGIAKELRKQRFADGA 548
Query: 691 LRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLR 749
LRL+ + F D E G P + D N L EEFMLLAN A I RAFP+ ALLR
Sbjct: 549 LRLDQLRLAFTLDRETGLPQGCHIYEYRDSNKLVEEFMLLANMAVAREIHRAFPERALLR 608
Query: 750 RHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRP 809
RHP P + L + FC + GL +D SS+G ++SL + K ++L N +RP
Sbjct: 609 RHPPPQTKMLNDLMEFCEQLGLPMDFSSAGALNKSLTETFGDDKYSLARKEVLTNMCSRP 668
Query: 810 MQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKH 869
MQ+A YFC+G +D + HYAL P+YTHFTSP+RR+ D++VHR L AAL Y +
Sbjct: 669 MQMALYFCAGTLRDPAQFRHYALNVPLYTHFTSPIRRFADVMVHRLLAAALG----YREP 724
Query: 870 RRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCN 929
M P ++L A HCN
Sbjct: 725 PDMEP--------------------------------------------NVLQKRADHCN 740
Query: 930 DRKLACRNVKDACVKLYMWILLKK 953
DR++A + V++ L+ IL+K+
Sbjct: 741 DRRMASKRVQELSTGLFFAILVKE 764
>gi|55725227|emb|CAH89479.1| hypothetical protein [Pongo abelii]
Length = 863
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 287/809 (35%), Positives = 405/809 (50%), Gaps = 107/809 (13%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
IF + S E V+E L++G + + R+N EA+ D+ I G+ A+NRA+ G
Sbjct: 49 IFETYMSKEDVSEGLKRGTLIQGVLRINPKKFHEAFIPSPDGDRDIFIDGVVARNRALNG 108
Query: 219 DFVLIKVDRLSLWAKMKGFSNN--SSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNC 276
D V++K+ W +K SN+ + +S++P E G H KS D +
Sbjct: 109 DLVVVKLLPEEQWKVVKPESNDKETEAAYESDIPEELCGHHLPQQSLKSYND------SP 162
Query: 277 TLLSEKGIHHDDDSSSEAYNQEMIEREGYNYI----------NGHHPSTSDSTEKVSSSQ 326
++ E D Q ++ +G + +G P T D T +S
Sbjct: 163 DVIVEAQFDGSDSEDGHGITQNVL-VDGVKKLSVCVSEKGREDGDAPVTKDETTCISQDT 221
Query: 327 QNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDA 386
+ +++R + +VV I+E+ R GFL + A
Sbjct: 222 RALPEKSLQR-------------SAKVVYILEKKHSR-AATGFLKLL------------A 255
Query: 387 KKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDE 446
KN R+Y +P+ + P++ V +KD P R ++ T L RI +
Sbjct: 256 DKNSELF----RKYALFSPSDHRVPRIYVPLKDCPQDFVARPKDYANT----LFICRIVD 307
Query: 447 WNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEE 505
W E+ F + G+ GE+EP+ IL E + S FS E L CLP +PW +P EE
Sbjct: 308 WKEDCNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLECLPQGLPWTIPPEE 367
Query: 506 LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEA 565
R+DLR CIFTIDPSTA DLDDALS + L+DG VGVHIADVSYFV G+ LD A
Sbjct: 368 FSKRRDLRKDCIFTIDPSTARDLDDALSCKPLADGNFEVGVHIADVSYFVPEGSDLDKVA 427
Query: 566 QVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIR 625
R+TSVY++Q+ +PMLP LL EE+ SLNP D+L FS+ W L G ++D W GRT+I
Sbjct: 428 AERATSVYLVQKVVPMLPRLLCEELRSLNPMSDKLTFSVIWTLTPEGKILDEWFGRTIIC 487
Query: 626 SCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKR 685
SC KLSYEHAQ +I+ + + L P + + +V +++ +L+ ++K L+ +R
Sbjct: 488 SCTKLSYEHAQSMIENPTEKIPAKEL----PPISPEHSSEEVHQAVLNLHGIAKQLRQQR 543
Query: 686 FTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPD 744
F DGALRL+ K F D E G P + D N L EEFMLLAN A I RAFP+
Sbjct: 544 FVDGALRLDQLKLAFTLDHETGLPQGCHIYEYRDSNKLVEEFMLLANMAVAHKIHRAFPE 603
Query: 745 SALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN 804
ALLRRHP+P R L + FC + GL +D SS+G ++SL Q K ++L N
Sbjct: 604 QALLRRHPSPQTRMLSDLVEFCDQMGLLVDLSSAGALNKSLTQTFGDDKYSLARKEVLTN 663
Query: 805 YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
+RPMQ+A YFCSG +D + HYAL P+YTHFTSP+RR+ D++VHR L AL
Sbjct: 664 MCSRPMQMALYFCSGLLQDPARFRHYALNVPLYTHFTSPIRRFADVLVHRLLAVAL---- 719
Query: 865 LYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNV 924
G R R D A D L
Sbjct: 720 ----------------GYRERL--------DMA--------------------PDTLQKQ 735
Query: 925 ATHCNDRKLACRNVKDACVKLYMWILLKK 953
A HCNDR++A + V++ L+ +L+K+
Sbjct: 736 ADHCNDRRMASKRVQELSTSLFFAVLVKE 764
>gi|380809604|gb|AFE76677.1| DIS3-like exonuclease 2 [Macaca mulatta]
Length = 888
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 287/807 (35%), Positives = 404/807 (50%), Gaps = 103/807 (12%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
IF + E V+E L++G + + R+N EA+ D+ I G+ A+NRA+ G
Sbjct: 49 IFETYMFKEDVSEGLKRGTLIQGVLRINPKKFHEAFIPSPDGDRDIFIDGVVARNRALNG 108
Query: 219 DFVLIKVDRLSLWAKMKGFSNN--SSIVEDSNLPTEANGMHSDICKGKSKVD-----VSY 271
D V++K+ W +K +N+ + +S++P E G H KS D +
Sbjct: 109 DLVVVKLLPEEQWKVVKPENNDKETEAAYESDIPEELCGRHLPQQSLKSYNDSPDVIIEA 168
Query: 272 EYSNCTLLSEKGIHHD---DDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQN 328
++ GI + DD + RE +G P T D T +S +
Sbjct: 169 QFDGSDSEDGHGITQNVLVDDVKKLSVCVSEKGRE-----DGDAPVTKDETTCISQDTRA 223
Query: 329 DGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKK 388
+++R + +VV I+E+ R GFL + A K
Sbjct: 224 LPEKSLQR-------------SAKVVYILEKKHSR-AATGFLKLL------------ADK 257
Query: 389 NRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWN 448
N R+Y +P+ + P++ V +KD P R ++ T L RI +W
Sbjct: 258 NSELF----RKYALFSPSDHRVPRIYVPLKDCPQDFVARPKDYANT----LFICRIVDWK 309
Query: 449 EESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEELL 507
E+ F + G+ GE+EP+ IL E + S FS E L CLP +PW +P EE
Sbjct: 310 EDCNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLECLPQGLPWTIPPEEFS 369
Query: 508 SRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQV 567
R+DLR CIFTIDPSTA DLDDALS + L+DG VGVHIADVSYFV G+ LD A
Sbjct: 370 KRRDLRKDCIFTIDPSTARDLDDALSCKPLADGNFEVGVHIADVSYFVPEGSDLDKVAAE 429
Query: 568 RSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSC 627
R+TSVY++Q+ +PMLP LL EE+ SLNP D+L FS+ W L G ++D W GRT+I SC
Sbjct: 430 RATSVYLVQKVVPMLPRLLCEELCSLNPMSDKLTFSVIWTLTPEGKILDEWFGRTIICSC 489
Query: 628 CKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFT 687
KLSYEHAQ +I+ + + L P + + +V +++ +L++++K L+ +RF
Sbjct: 490 TKLSYEHAQSMIESPTEKIPAKEL----PPISPEHSSEEVHQAVLNLHQIAKQLRQQRFA 545
Query: 688 DGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSA 746
DGALRL+ K F D E G P + D N L EEFMLLAN A I RAFP+ A
Sbjct: 546 DGALRLDQLKLAFTLDHETGLPQGCHIYEYRDSNKLVEEFMLLANMAVAHKIHRAFPEQA 605
Query: 747 LLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYA 806
LLRRHP P R L + FC + GL +D SS+G ++SL Q K ++L N
Sbjct: 606 LLRRHPPPQTRMLNDLVEFCDQMGLPVDFSSAGALNKSLTQTFGDDKYSLARKEVLTNMC 665
Query: 807 TRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
+RPMQ+A YFCSG +D + HYAL P+YTHFTSP+RR+ D++VHR L AAL Y
Sbjct: 666 SRPMQMALYFCSGLLQDPAQFRHYALNVPLYTHFTSPIRRFADVLVHRLLAAALG----Y 721
Query: 867 WKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVAT 926
K M P D L A
Sbjct: 722 RKQLDMAP--------------------------------------------DTLQKQAD 737
Query: 927 HCNDRKLACRNVKDACVKLYMWILLKK 953
HCNDR++A + V++ L+ +L+K+
Sbjct: 738 HCNDRRMASKRVQELSTGLFFAVLVKE 764
>gi|383415831|gb|AFH31129.1| DIS3-like exonuclease 2 [Macaca mulatta]
gi|384945330|gb|AFI36270.1| DIS3-like exonuclease 2 [Macaca mulatta]
Length = 888
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 287/807 (35%), Positives = 404/807 (50%), Gaps = 103/807 (12%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
IF + E V+E L++G + + R+N EA+ D+ I G+ A+NRA+ G
Sbjct: 49 IFETYMFKEDVSEGLKRGTLIQGVLRINPKKFHEAFIPSPDGDRDIFIDGVVARNRALNG 108
Query: 219 DFVLIKVDRLSLWAKMKGFSNN--SSIVEDSNLPTEANGMHSDICKGKSKVD-----VSY 271
D V++K+ W +K +N+ + +S++P E G H KS D +
Sbjct: 109 DLVVVKLLPEEQWKVVKPENNDKETEAAYESDIPEELCGRHLPQQSLKSYNDSPDVIIEA 168
Query: 272 EYSNCTLLSEKGIHHD---DDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQN 328
++ GI + DD + RE +G P T D T +S +
Sbjct: 169 QFDGSDSEDGHGITQNVLVDDVKKLSVCVSEKGRE-----DGDAPVTKDETTCISQDTRA 223
Query: 329 DGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKK 388
+++R + +VV I+E+ R GFL + A K
Sbjct: 224 LPEKSLQR-------------SAKVVYILEKKHSR-AATGFLKLL------------ADK 257
Query: 389 NRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWN 448
N R+Y +P+ + P++ V +KD P R ++ T L RI +W
Sbjct: 258 NSELF----RKYALFSPSDHRVPRIYVPLKDCPQDFVARPKDYANT----LFICRIVDWK 309
Query: 449 EESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEELL 507
E+ F + G+ GE+EP+ IL E + S FS E L CLP +PW +P EE
Sbjct: 310 EDCNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLECLPQGLPWTIPPEEFS 369
Query: 508 SRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQV 567
R+DLR CIFTIDPSTA DLDDALS + L+DG VGVHIADVSYFV G+ LD A
Sbjct: 370 KRRDLRKDCIFTIDPSTARDLDDALSCKPLADGNFEVGVHIADVSYFVPEGSDLDKVAAE 429
Query: 568 RSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSC 627
R+TSVY++Q+ +PMLP LL EE+ SLNP D+L FS+ W L G ++D W GRT+I SC
Sbjct: 430 RATSVYLVQKVVPMLPRLLCEELCSLNPMSDKLTFSVIWTLTPEGKILDEWFGRTIICSC 489
Query: 628 CKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFT 687
KLSYEHAQ +I+ + + L P + + +V +++ +L++++K L+ +RF
Sbjct: 490 TKLSYEHAQSMIESPTEKIPAKEL----PPISPEHSSEEVHQAVLNLHQIAKQLRQQRFA 545
Query: 688 DGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSA 746
DGALRL+ K F D E G P + D N L EEFMLLAN A I RAFP+ A
Sbjct: 546 DGALRLDQLKLAFTLDHETGLPQGCHIYEYRDSNKLVEEFMLLANMAVAHKIHRAFPEQA 605
Query: 747 LLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYA 806
LLRRHP P R L + FC + GL +D SS+G ++SL Q K ++L N
Sbjct: 606 LLRRHPPPQTRMLNDLVEFCDQMGLPVDFSSAGALNKSLTQTFGDDKYSLARKEVLTNMC 665
Query: 807 TRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
+RPMQ+A YFCSG +D + HYAL P+YTHFTSP+RR+ D++VHR L AAL Y
Sbjct: 666 SRPMQMALYFCSGLLQDPAQFRHYALNVPLYTHFTSPIRRFADVLVHRLLAAALG----Y 721
Query: 867 WKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVAT 926
K M P D L A
Sbjct: 722 RKQLDMAP--------------------------------------------DTLQKQAD 737
Query: 927 HCNDRKLACRNVKDACVKLYMWILLKK 953
HCNDR++A + V++ L+ +L+K+
Sbjct: 738 HCNDRRMASKRVQELSTGLFFAVLVKE 764
>gi|24233556|ref|NP_705758.1| DIS3-like exonuclease 2 isoform 2 [Mus musculus]
gi|81900485|sp|Q8CI75.1|DI3L2_MOUSE RecName: Full=DIS3-like exonuclease 2
gi|23273603|gb|AAH36177.1| DIS3 mitotic control homolog (S. cerevisiae)-like 2 [Mus musculus]
gi|148708250|gb|EDL40197.1| RIKEN cDNA 4930429A22, isoform CRA_c [Mus musculus]
Length = 870
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 279/803 (34%), Positives = 406/803 (50%), Gaps = 97/803 (12%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
IF + S E V+E L++G + + R+N EA+ D+ I G+ A+NRA+ G
Sbjct: 49 IFETYMSKEDVSEGLKRGTLIQGVLRINPKKFHEAFIPSPDGDRDIFIDGVVARNRALNG 108
Query: 219 DFVLIKVDRLSLWAKMKGFSNNSSI--VEDSNLPTEANGMH--SDICKGKSKVDVSYEYS 274
D V++K+ W +K SN+ I ++++P E G H KG S DV E
Sbjct: 109 DLVVVKLLPEDQWKAVKPESNDKEIEATYEADIPEEGCGHHPLQQSRKGWSGPDVIIE-- 166
Query: 275 NCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAI 334
DD S + + +G ++ P E S+ D I
Sbjct: 167 ---------AQFDDSDSEDRHGNTSGLVDGVKKLSISTPDRG--KEDSSTPVMKDENTPI 215
Query: 335 ERLSAMISSYPTKRPTGRVVSIIERSPRR--DGIVGFLNVNQWFNYKGGSRKDAKKNRSS 392
+ + +S ++ + +VV I+E+ R GI+ L A KN
Sbjct: 216 PQDTRGLSEKSLQK-SAKVVYILEKKHSRAATGILKLL---------------ADKNSDL 259
Query: 393 LSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESP 452
++Y +P+ + P++ V +KD P R ++ T L RI +W E+
Sbjct: 260 F----KKYALFSPSDHRVPRIYVPLKDCPQDFMTRPKDFANT----LFICRIIDWKEDCN 311
Query: 453 FPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEELLSRKD 511
F + G+ GE+EP+ IL E + S FS E L CLP +PW +P +E+ R+D
Sbjct: 312 FALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLECLPQSLPWTIPPDEVGKRRD 371
Query: 512 LRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTS 571
LR CIFTIDPSTA DLDDAL+ RL+DG VGVHIADVSYFV G++LD A R+TS
Sbjct: 372 LRKDCIFTIDPSTARDLDDALACRRLTDGTFEVGVHIADVSYFVPEGSSLDKVAAERATS 431
Query: 572 VYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLS 631
VY++Q+ +PMLP LL EE+ SLNP D+L FS+ W L G +++ W GRT+IRSC KLS
Sbjct: 432 VYLVQKVVPMLPRLLCEELCSLNPMTDKLTFSVIWKLTPEGKILEEWFGRTIIRSCTKLS 491
Query: 632 YEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGAL 691
Y+HAQ +I+ + E P + + +V +++ +L+ ++K L+ +RF DGAL
Sbjct: 492 YDHAQSMIENP----TEKIPEEELPPISPEHSVEEVHQAVLNLHSIAKQLRRQRFVDGAL 547
Query: 692 RLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRR 750
RL+ K F D E G P + D N L EEFMLLAN A I R FP+ ALLRR
Sbjct: 548 RLDQLKLAFTLDHETGLPQGCHIYEYRDSNKLVEEFMLLANMAVAHKIFRTFPEQALLRR 607
Query: 751 HPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPM 810
HP P + L + FC + GL +D SS+G ++SL + K ++L N +RPM
Sbjct: 608 HPPPQTKMLSDLVEFCDQMGLPMDVSSAGALNKSLTKTFGDDKYSLARKEVLTNMYSRPM 667
Query: 811 QLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR 870
Q+A YFCSG +D + HYAL P+YTHFTSP+RR+ D++VHR L AAL Y +
Sbjct: 668 QMALYFCSGMLQDQEQFRHYALNVPLYTHFTSPIRRFADVIVHRLLAAALG----YSEQP 723
Query: 871 RMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCND 930
+ P ++ A HCND
Sbjct: 724 DVEPDTLQKQ--------------------------------------------ADHCND 739
Query: 931 RKLACRNVKDACVKLYMWILLKK 953
R++A + V++ + L+ +L+K+
Sbjct: 740 RRMASKRVQELSIGLFFAVLVKE 762
>gi|149711619|ref|XP_001495438.1| PREDICTED: DIS3 mitotic control homolog (S. cerevisiae)-like 2
[Equus caballus]
Length = 881
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 289/805 (35%), Positives = 406/805 (50%), Gaps = 99/805 (12%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
IF + S E V+E L++G + + R+N EA+ D+ I G+ A+NRA+ G
Sbjct: 49 IFETYMSKEDVSEGLKRGTLIQGILRINPKKFHEAFIPSPDGDRDIFIDGVVARNRALNG 108
Query: 219 DFVLIKVDRLSLWAKMKGFSNNSSI--VEDSNLPTEANG--MHSDICKGKSKVDVSYEYS 274
D V++K+ W +K SN+ +S LP E G + KG Y+
Sbjct: 109 DLVVVKLFPEEQWKVIKPDSNDKETEGAYESYLPEELCGSLLPQQSLKG---------YN 159
Query: 275 NCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYING--HHPSTSDSTEKVSSSQQNDGMN 332
+ + + D DS N + I +G ++ H D+ V+ + N M
Sbjct: 160 DSPDVIIEAQFDDSDSEDGHGNTQNILVDGVKKLSVCLHEKGKEDAGAPVTKDE-NTSMA 218
Query: 333 AIERLSAMISSYPTK--RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNR 390
R + P K + + +VV I+E+ R GFL + A KN
Sbjct: 219 QDTR------TLPEKSLQRSAKVVYILEKKHSR-AATGFLKLL------------ADKNS 259
Query: 391 SSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEE 450
R+Y +P+ + P++ V +KD P R ++ T L RI +W E+
Sbjct: 260 ELF----RKYALFSPSDHRVPRIYVPLKDCPQDFVTRPKDYANT----LFICRIVDWKED 311
Query: 451 SPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEELLSR 509
S F + G+ GE+EP+ IL E + S FS E L CLP +PW +P EE R
Sbjct: 312 SNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLECLPQGLPWTIPPEEFNKR 371
Query: 510 KDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRS 569
+DLR CIFTIDPSTA DLDDALS + L+DG VGVHIADVSYFV G+ LD A R+
Sbjct: 372 RDLRKDCIFTIDPSTARDLDDALSCKPLTDGNFEVGVHIADVSYFVPEGSDLDKVAAERA 431
Query: 570 TSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCK 629
TSVY++Q+ IPMLP LL EE+ SLNP D+L FS+ W L G ++D W GRT+IRSC K
Sbjct: 432 TSVYLVQKVIPMLPRLLCEELCSLNPMTDKLTFSVIWTLTPKGKILDEWFGRTIIRSCTK 491
Query: 630 LSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDG 689
LSYEHAQ +I+ + + P + + +V R++ +L+ ++K L+ +RF DG
Sbjct: 492 LSYEHAQSMIESP----TKKIPEKELPPISPEHTSEEVHRAVLNLHGIAKELRKQRFVDG 547
Query: 690 ALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALL 748
ALRL+ K F D E G P + D N L EEFMLLAN A I RAFP+ ALL
Sbjct: 548 ALRLDQLKLAFTLDHETGLPQGCHIYEYRDSNKLVEEFMLLANMAVAHKIHRAFPERALL 607
Query: 749 RRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATR 808
RRHP P + L + FC + GL +D SS+G ++SL + K ++L N +R
Sbjct: 608 RRHPPPQTKMLNDLVEFCDQMGLSMDFSSAGALNKSLTETFGDDKYSLARKEVLTNMCSR 667
Query: 809 PMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWK 868
PMQ+A YFCSG +D + HYAL P+YTHFTSP+RR+ D++VHR L
Sbjct: 668 PMQMALYFCSGMLQDQAQFRHYALNVPLYTHFTSPIRRFADVLVHRLL------------ 715
Query: 869 HRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHC 928
A +L RE +V D L A HC
Sbjct: 716 ----------------------------AATLGYREVPNVE--------PDALQKQADHC 739
Query: 929 NDRKLACRNVKDACVKLYMWILLKK 953
NDR++A + V++ L+ +L+K+
Sbjct: 740 NDRRMASKRVQELSTSLFFSVLVKE 764
>gi|348577383|ref|XP_003474464.1| PREDICTED: DIS3-like exonuclease 2-like [Cavia porcellus]
Length = 875
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 281/799 (35%), Positives = 401/799 (50%), Gaps = 89/799 (11%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
IF + S E V++ L++G + + R+N EA+ D+ I G+ A+NRA+ G
Sbjct: 49 IFETYMSKEDVSKGLKRGTLIQGVLRINPKKFHEAFIPSPDGDRDIFIDGVVARNRALNG 108
Query: 219 DFVLIKVDRLSLWAKMKGFSNN--SSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNC 276
D V++K+ W +K SN+ + +S LP E G H
Sbjct: 109 DLVVVKLLPEEQWKVIKPESNDKVAEAAYESELPEELCGHH------------------L 150
Query: 277 TLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIER 336
L S +G + D EA + +G+ G D +K+S + G + +
Sbjct: 151 PLQSLRGYNDSPDVIIEAQYDDSDSEDGHG---GTQNVLVDGVKKLSVCSHDKGKSDTQV 207
Query: 337 LSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVP 396
S P P R S E+SP++ V ++ + G K + S L
Sbjct: 208 TKD--ESSPMS-PDARGPS--EKSPQKSAKVVYILEKKHSRAATGVLKLLAEKNSDLF-- 260
Query: 397 DREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQA 456
R+Y +P+ + P++ V +KD P R ++ +T L I +W E+ F
Sbjct: 261 -RKYALFSPSDHRVPRIYVPLKDCPQDFMTRPKDYAST----LFICHIVDWKEDCNFALG 315
Query: 457 HVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEELLSRKDLRNF 515
+ G+ GE+EP+ IL E + S FS E L CLP +PW +P EE+ R+DLR
Sbjct: 316 KLAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLECLPRSLPWTIPPEEVSKRRDLRKD 375
Query: 516 CIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYML 575
C+FTIDP TA DLDDALS L+DG +VGVHIADVSYFV G+ LD A R+TSVY++
Sbjct: 376 CVFTIDPPTARDLDDALSCRPLADGTFQVGVHIADVSYFVPQGSQLDKVAAERATSVYLV 435
Query: 576 QRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHA 635
Q+ +PMLP LL EE+ SLNP D+L FS+ W L S G ++D W GRT+IRSC KLSYEHA
Sbjct: 436 QKVVPMLPRLLCEELCSLNPMTDKLTFSVIWTLTSEGKILDEWFGRTIIRSCTKLSYEHA 495
Query: 636 QDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLEN 695
Q +I+ + L P + + ++ +++ +L+ ++K L+ +RF +GALRL+
Sbjct: 496 QSMIERPAEKIPEREL----PPISPEHSPEELHQAVLNLHRIAKQLRRQRFANGALRLDQ 551
Query: 696 SKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAP 754
K F D E G P + D N L EEFMLLAN A I AFP+ ALLRRHP P
Sbjct: 552 LKLAFTLDHETGLPQGCHIYEYHDSNKLVEEFMLLANMAVAHKIHGAFPEQALLRRHPPP 611
Query: 755 NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLAS 814
+ L + FC + GL +D SS+G H+SL + K ++L N +RPMQ+A
Sbjct: 612 QTKMLGDLVEFCDQMGLAVDVSSAGALHKSLTKIFGDDKYSLARKEVLTNMFSRPMQMAL 671
Query: 815 YFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLP 874
YFCSG +D + HYAL P+YTHFTSP+RR+ D++VHR L AAL
Sbjct: 672 YFCSGVLRDQAQFQHYALNVPLYTHFTSPIRRFADVLVHRLLAAAL-------------- 717
Query: 875 KNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLA 934
+ LE D L A HCNDR++A
Sbjct: 718 --------------------GCGQQLEVE--------------PDALQKQADHCNDRRMA 743
Query: 935 CRNVKDACVKLYMWILLKK 953
+ V++ L+ IL+K+
Sbjct: 744 SKRVQELSTALFFGILVKE 762
>gi|426221711|ref|XP_004005051.1| PREDICTED: DIS3-like exonuclease 2 [Ovis aries]
Length = 882
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 295/804 (36%), Positives = 404/804 (50%), Gaps = 81/804 (10%)
Query: 147 DNPSHQSEARCK---IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTD 203
D S AR K IF + S E V+E L++G + + R+N EA+ D
Sbjct: 34 DKKSKSKTARGKKKSIFETYMSKEDVSEGLKRGTLIQGVLRINPKKFHEAFIPSPDGDRD 93
Query: 204 VLITGIAAQNRAVEGDFVLIKVDRLSLWAKMKGFSNNSSI--VEDSNLPTEANGMHSDIC 261
+ I G+ A+NRA+ GD V++K+ W +K SN+ +S+LP E G
Sbjct: 94 IFIDGVVARNRALNGDLVVVKLLPEEQWKVIKPESNDKETEGAYESDLPEELCG------ 147
Query: 262 KGKSKVDVSYEYSNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEK 321
S S KG + D EA + +G+ + D +K
Sbjct: 148 ------------SQLPQQSLKGYNDSPDVIIEAQFDDSDSEDGHGNTQN---ALVDGVKK 192
Query: 322 VSSSQQNDGM-----------NAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFL 370
+S Q G N + + + + + +VV I+E+ R GFL
Sbjct: 193 LSVCVQEKGKEDAGAPVIKDENTFTSQDSRVLPEKSLQRSAKVVYILEKKHSR-AATGFL 251
Query: 371 NVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEE 430
+ A KN R+Y +P+ + P++ V +KD P R ++
Sbjct: 252 KLL------------ADKNSELF----RKYALFSPSDHRVPRIYVPLKDCPQDFVTRPKD 295
Query: 431 GDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPES 490
T L RI +W E+S F + G+ GE+EP+ IL E + S FS E
Sbjct: 296 YANT----LFICRIMDWKEDSNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSSEV 351
Query: 491 LSCLP-CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIA 549
L CLP +PW VP EEL R+DLR CIFTIDPSTA DLDDALS + L+DG VGVHIA
Sbjct: 352 LECLPQGLPWTVPPEELSRRRDLRKDCIFTIDPSTARDLDDALSCKPLADGNFEVGVHIA 411
Query: 550 DVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLN 609
DVSYFV G++LD A R+TSVY++Q+ +PMLP LL EE+ SLNP D+L FS+ W L
Sbjct: 412 DVSYFVPEGSSLDKVAAERATSVYLVQKVVPMLPRLLCEELCSLNPMTDKLTFSVIWTLT 471
Query: 610 SAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVR 669
G ++ W GRT+IRSC KLSYEHAQ +I+ L P + + +V R
Sbjct: 472 PKGKILAEWFGRTIIRSCTKLSYEHAQSMIESPTRRIPEREL----PAISPEHTCDEVHR 527
Query: 670 SIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFML 728
++ +L+ ++K L+ +RF DGALRL+ K F D E G P + D N L EEFML
Sbjct: 528 AVLNLHGIAKELRRQRFADGALRLDQLKLAFTLDHETGLPQGCHVYEYRDSNKLVEEFML 587
Query: 729 LANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQA 788
LAN A I RAFP+ ALLRRHP P + L + FC + GL +D SS+G ++SL +
Sbjct: 588 LANMAVAHKIHRAFPEQALLRRHPPPQTKMLNDLVEFCDQMGLPMDFSSAGALNKSLTEM 647
Query: 789 REKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYP 848
K ++L N +RPMQ+A YFCSG +D + HYAL P+YTHFTSP+RR+
Sbjct: 648 FGDDKYSLARKEVLTNMCSRPMQMAVYFCSGALRDPAQFRHYALNVPLYTHFTSPIRRFA 707
Query: 849 DLVVHRTLNAALEAEKLYWKHRRMLPKN----NHREGVRGR---FLTGIFYDKDAAES-- 899
D++VHR L +AL +L L K N R R TG+F+ ES
Sbjct: 708 DVLVHRLLASALGYRELPDVEPDTLQKQADHCNDRRMASKRVQELSTGLFFAILVRESGP 767
Query: 900 LEGR--------EALSVAALKYGV 915
LE +A V L+YGV
Sbjct: 768 LESEAMVMGVLNQAFDVLVLRYGV 791
>gi|354497262|ref|XP_003510740.1| PREDICTED: DIS3-like exonuclease 2 isoform 1 [Cricetulus griseus]
gi|344252915|gb|EGW09019.1| DIS3-like exonuclease 2 [Cricetulus griseus]
Length = 876
Score = 437 bits (1124), Expect = e-119, Method: Compositional matrix adjust.
Identities = 269/723 (37%), Positives = 382/723 (52%), Gaps = 75/723 (10%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
IF + S E V+E L++G + + R+N EA+ D+ I G+ A+NRA+ G
Sbjct: 49 IFETYMSKEDVSEGLKRGTLIQGVLRINPKKFHEAFIPSPDGDRDIFIDGVVARNRALNG 108
Query: 219 DFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCTL 278
D V++K+ W K SN+ TEA + D+S EY L
Sbjct: 109 DLVVVKLLPEDQWKAAKPESNDKE--------TEAT----------YEADISEEYCGQHL 150
Query: 279 L--SEKGI---------HHDDDSSSEAYNQEMIEREGYNYINGHHP------STSDSTEK 321
L S KG DD S + + + +G ++ H P S++ T++
Sbjct: 151 LQQSPKGCNSPDVIIEAQFDDSDSEDRHGNTSVLVDGVKELSLHTPDKGKEESSAPVTKE 210
Query: 322 VSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRR--DGIVGFLNVNQWFNYK 379
++S D E+ + + + +VV I+E+ R GI+ L
Sbjct: 211 ENTSTSQDTRALPEK---------SLQKSAKVVYILEKKHSRAATGILKLL--------- 252
Query: 380 GGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMEL 439
A KN ++Y +P+ + P++ V +KD P R ++ T L
Sbjct: 253 ------ADKNSDLF----KKYALFSPSDHRVPRIYVPLKDCPQDFITRPKDYTNT----L 298
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVP 498
RI +W E+ F + G+ GE+EP+ IL E + S FS E L CLP +P
Sbjct: 299 FICRIIDWKEDCNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLECLPQSLP 358
Query: 499 WEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPG 558
W +P +EL R+DLR CIFTIDPSTA DLDDALS L+DG VGVHIADVSYFV G
Sbjct: 359 WTIPPDELGKRRDLRKDCIFTIDPSTARDLDDALSCRPLTDGTFEVGVHIADVSYFVPEG 418
Query: 559 TALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW 618
++L++ A R+TSVY++Q+ +PMLP LL EE+ SLNP D+L FS+ W L G +++ W
Sbjct: 419 SSLNMVAAERATSVYLVQKVVPMLPRLLCEELCSLNPMTDKLTFSVIWKLTPEGKILEEW 478
Query: 619 IGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVS 678
GRTVIRSC KLSY+HAQ +I+ + E P + + +V +++ +L+ ++
Sbjct: 479 FGRTVIRSCTKLSYDHAQSMIENP----TEKLPEEELPPVSPEHSSEEVHQAVLNLHSIA 534
Query: 679 KILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEV 737
K L+ +RF DGALRL+ K F D E G P + D N L EEFMLLAN A
Sbjct: 535 KQLRQQRFVDGALRLDQLKLAFTLDHETGMPQGCHIYEYRDSNKLVEEFMLLANMAVAHK 594
Query: 738 IARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYV 797
I R FP+ ALLRRHP P + L + FC + GL +D SS+G ++SL + K
Sbjct: 595 IFRTFPEQALLRRHPPPQTKMLSDLVEFCDQMGLPMDVSSAGALNKSLTKTFGDDKYSLA 654
Query: 798 LFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLN 857
++L N +RPMQ+A YFCSG +D + HYAL P+YTHFTSP+RR+ D++VHR L
Sbjct: 655 RKEVLTNMYSRPMQMALYFCSGMLQDQAQFRHYALNVPLYTHFTSPIRRFADVIVHRLLA 714
Query: 858 AAL 860
AAL
Sbjct: 715 AAL 717
>gi|440896732|gb|ELR48582.1| DIS3-like exonuclease 2, partial [Bos grunniens mutus]
Length = 871
Score = 437 bits (1124), Expect = e-119, Method: Compositional matrix adjust.
Identities = 291/795 (36%), Positives = 403/795 (50%), Gaps = 90/795 (11%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
IF + S E V+E L++G + + R+N EA+ D+ I G+ A+NRA+ G
Sbjct: 49 IFETYMSKEDVSEGLKRGTLIQGVLRINPKKFHEAFIPSPDGDRDIFIDGVVARNRALNG 108
Query: 219 DFVLIKVDRLSLWAKMKGFSNNSSI--VEDSNLPTEANGMHSDICKGKSKVDVSYEYSNC 276
D V++K+ W +K SN+ +S+LP E G S
Sbjct: 109 DLVVVKLLPEEQWKVIKSESNDKETEGAYESDLPEELCG------------------SQL 150
Query: 277 TLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVS-----SSQQNDGM 331
S KG + D EA + +G+ + D +K+S +++ G
Sbjct: 151 PQQSLKGYNDSPDVIIEAQFDDSDSEDGHGNTQN---ALVDGVKKLSVCVQEKGKEDAGA 207
Query: 332 NAIERLSAMISS----YPTK--RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKD 385
AI+ + S P K + + +VV I+E+ R GFL +
Sbjct: 208 PAIKDENTFTSQDSRVLPEKSLQRSAKVVYILEKKHSR-AATGFLKLL------------ 254
Query: 386 AKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARID 445
A KN R+Y +P+ + P++ V +KD P R ++ T L RI
Sbjct: 255 ADKNSELF----RKYALFSPSDHRVPRIYVPLKDCPQDFVTRPKDYANT----LFICRIM 306
Query: 446 EWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQE 504
+W E+S F + G+ GE+EP+ IL E + S FS E L CLP +PW +P E
Sbjct: 307 DWKEDSNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLECLPQGLPWTIPPE 366
Query: 505 ELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIE 564
E R+DLR CIFTIDPSTA DLDDALS + L+DG VGVHIADVSYFV G++LD
Sbjct: 367 EFRRRRDLRKDCIFTIDPSTARDLDDALSCKSLADGNFEVGVHIADVSYFVPEGSSLDKV 426
Query: 565 AQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVI 624
A R+TSVY++Q+ +PMLP LL EE+ SLNP D+L FS+ W L G ++ W GRT+I
Sbjct: 427 AAERATSVYLVQKVVPMLPRLLCEELCSLNPMTDKLTFSVIWTLTPKGKILAEWFGRTII 486
Query: 625 RSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDK 684
RSC KLSYEHAQ +I+ L P + + +V R++ +L+ V+K L+ +
Sbjct: 487 RSCTKLSYEHAQSMIESPTRRIPEREL----PAISPEHTCDEVHRAVLNLHGVAKELRRQ 542
Query: 685 RFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFP 743
RF DGALRL+ K F D E G P + D N L EEFMLLAN A I RAFP
Sbjct: 543 RFADGALRLDQLKLAFTLDHETGLPQGCHVYEYRDSNKLVEEFMLLANMAVAHKIHRAFP 602
Query: 744 DSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILI 803
+ ALLRRHP P + L + FC + GL +D SS+G ++SL + K ++L
Sbjct: 603 EQALLRRHPPPQTKMLNDLVEFCDQMGLPMDFSSAGALNKSLTEMFGDDKYSLARKEVLT 662
Query: 804 NYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE 863
N +RPMQ+A YFCSG +D + HYAL P+YTHFTSP+RR+ D++VHR L +AL
Sbjct: 663 NMCSRPMQMAVYFCSGALRDPAQFRHYALNVPLYTHFTSPIRRFADVLVHRLLASALGYR 722
Query: 864 KL-------------YWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAES--LEGR----- 903
+L + RRM K TG+F+ ES LE
Sbjct: 723 ELPDVEPDSLQKQADHCNDRRMASKRVQ------ELSTGLFFAILVRESGPLESEAMVMG 776
Query: 904 ---EALSVAALKYGV 915
+A V L+YGV
Sbjct: 777 VLNQAFDVLVLRYGV 791
>gi|363737173|ref|XP_422741.3| PREDICTED: DIS3-like exonuclease 2-like [Gallus gallus]
Length = 864
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 286/834 (34%), Positives = 415/834 (49%), Gaps = 104/834 (12%)
Query: 134 ANDSSCWAYTNKDDNPSHQSEARCK---IFAPHWSMEAVNEALEKGDAFKALYRVNAHNR 190
A S A D + AR K IF + S E V+ L++G+ + R+N
Sbjct: 21 AERGSYAAVPTSGDRKNRNKPARGKKKSIFEAYMSKEDVSAGLKRGELIQGPLRINPKKY 80
Query: 191 LEAYCKIEGVQTDVLITGIAAQNRAVEGDFVLIKVDRLSLWAKMK--GFSNNSSIVEDSN 248
EA+ D+ I G+ A+NRA+ GD V++++ W +K G + +S+
Sbjct: 81 HEAFIPSPDGTRDIFIDGVVARNRALNGDIVVVRLLPREQWKVIKPDGGDKETEATHESD 140
Query: 249 LPTEANGMHS--DICKGKSKVDVSYEYSNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYN 306
+P + G + + KG +K + ++ E DD + + Q+ + R+
Sbjct: 141 VPEDMLGTWAPREAAKGDAK--------SPDVIIEAQFDDDDAEHGQDHLQDTLARDIKT 192
Query: 307 YINGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISS---YPTK--RPTGRVVSIIERSP 361
+ D+ EK ++ +G E + P K + T +VV I+E+
Sbjct: 193 L-------SLDTAEK--GQEKGEGTTKQEEVPKATPDPKLLPDKFLQRTAKVVYILEKKH 243
Query: 362 RRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLP 421
R GF+ + A KN ++ +P + P+ V + D P
Sbjct: 244 SR-AATGFIKLL------------ADKNSELF----KKCAMFSPVDHRVPRAYVSLADCP 286
Query: 422 DSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAI 481
R E+ L RI +W E+S F + G+ GE+EP+ IL E +
Sbjct: 287 SDFVARPEDYSNM----LFICRIVDWKEDSNFASGQLAKSLGQAGEIEPETEGILTEYGV 342
Query: 482 CCSGFSPESLSCLP-CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDG 540
S FSPE+L CLP +PW + E+ R+DLR CIFTIDPSTA DLDDALS ++L DG
Sbjct: 343 DFSDFSPEALECLPQGLPWVISPGEMAKRRDLRKECIFTIDPSTAKDLDDALSCKQLPDG 402
Query: 541 ISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRL 600
VGVHIADVSYFVL TALD A R+TSVY++Q+ IPMLP LL EE+ SLNP DRL
Sbjct: 403 NFEVGVHIADVSYFVLEETALDRVASERATSVYLVQKVIPMLPKLLCEELCSLNPMRDRL 462
Query: 601 AFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYG 660
FS+ W + G ++D W GRTVI SC KLSY+HAQ +I+ V S L P +
Sbjct: 463 TFSVMWKVTPEGKILDEWFGRTVICSCAKLSYDHAQSMIENPGKVFSPEEL----PPISP 518
Query: 661 QFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDL 719
Q +++ +++ +L+ +++ L+ +RF DGALRL+ K F D E G P + D
Sbjct: 519 QHSVAEIQQAVLNLHHIARHLRKQRFIDGALRLDQLKLSFTLDQESGMPQGCYIYQYRDS 578
Query: 720 NFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSG 779
N L EEFMLLAN A I R+FP+ ALLRRHP P + L + FC + GL++D SS+G
Sbjct: 579 NKLVEEFMLLANMAVAHQIYRSFPEQALLRRHPPPQSKLLNDLMEFCHQVGLEIDFSSAG 638
Query: 780 QFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTH 839
H+SL + K ++L N +RPMQ+A YFC+G KD+T + HYAL P YTH
Sbjct: 639 SLHKSLNETFGADKYSEARKEVLTNMFSRPMQMALYFCTGVLKDETLFRHYALNVPFYTH 698
Query: 840 FTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAES 899
FTSP+RRY D+VVHR L+A+L P +E ++ +
Sbjct: 699 FTSPIRRYADVVVHRLLSASLGISS---------PIKMEKEAIQRQ-------------- 735
Query: 900 LEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKK 953
A HCNDRK+A + V++ L+ + +++
Sbjct: 736 -------------------------AEHCNDRKMASKRVQELSTDLFFAVFVRE 764
>gi|300795442|ref|NP_001179435.1| DIS3-like exonuclease 2 [Bos taurus]
gi|296490216|tpg|DAA32329.1| TPA: DIS3 mitotic control homolog-like 2 [Bos taurus]
Length = 882
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 288/795 (36%), Positives = 398/795 (50%), Gaps = 90/795 (11%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
IF + S E V+E L++G + + R+N EA+ D+ I G+ A+NRA+ G
Sbjct: 49 IFETYMSKEDVSEGLKRGTLIQGVLRINPKKFHEAFIPSPDGDRDIFIDGVVARNRALNG 108
Query: 219 DFVLIKVDRLSLWAKMKGFSNNSSI--VEDSNLPTEANGMHSDICKGKSKVDVSYEYSNC 276
D V++K+ W +K SN+ +S+LP E G S
Sbjct: 109 DLVVVKLLPEEQWKVIKPESNDKETEGAYESDLPEELCG------------------SQL 150
Query: 277 TLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGM----- 331
S KG + D EA + +G+ + D +K+S Q G
Sbjct: 151 PQQSLKGYNDSPDVIIEAQFDDSDSEDGHGNTQN---ALVDGVKKLSVCVQEKGKEDAGA 207
Query: 332 ------NAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKD 385
N + + + + + +VV I+E+ R GFL +
Sbjct: 208 PVIKDENTFTSQDSRVLPEKSLQRSAKVVYILEKKHSR-AATGFLKLL------------ 254
Query: 386 AKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARID 445
A KN R+Y +P+ + P++ V +KD P R ++ T L RI
Sbjct: 255 ADKNSELF----RKYALFSPSDHRVPRIYVPLKDCPQDFVTRPKDYANT----LFICRIM 306
Query: 446 EWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQE 504
+W E+S F + G+ GE+EP+ IL E + S FS E L CLP +PW +P E
Sbjct: 307 DWKEDSNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLECLPQGLPWTIPPE 366
Query: 505 ELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIE 564
E R+DLR CIFTIDPSTA DLDDALS + L+DG VGVHIADVSYFV G++LD
Sbjct: 367 EFSRRRDLRKDCIFTIDPSTARDLDDALSCKSLADGNFEVGVHIADVSYFVPEGSSLDKV 426
Query: 565 AQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVI 624
A R+TSVY++Q+ +PMLP LL EE+ SLNP D+L FS+ W L G ++ W GRT+I
Sbjct: 427 AAERATSVYLVQKVVPMLPRLLCEELCSLNPMTDKLTFSVIWTLTPKGKILAEWFGRTII 486
Query: 625 RSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDK 684
RSC KLSYEHAQ +I+ L P + + +V R++ +L+ V+K L+ +
Sbjct: 487 RSCTKLSYEHAQSMIESPTRRIPEREL----PAISPEHTCDEVHRAVLNLHGVAKELRRQ 542
Query: 685 RFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFP 743
RF DGALRL+ K F D E G P + D N L EEFMLLAN A I RAFP
Sbjct: 543 RFADGALRLDQLKLAFTLDHETGLPQGCHVYEYRDSNKLVEEFMLLANMAVAHKIHRAFP 602
Query: 744 DSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILI 803
+ ALLRRHP P + L + FC + GL +D SS+G ++SL + K ++L
Sbjct: 603 EQALLRRHPPPQTKMLNDLVEFCDQMGLPMDFSSAGALNKSLTEMFGDDKYSLARKEVLT 662
Query: 804 NYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE 863
N +RPMQ+A YFCSG +D + HYAL P+YTHFTSP+RR+ D++VHR L +AL
Sbjct: 663 NMCSRPMQMAVYFCSGALRDPAQFRHYALNVPLYTHFTSPIRRFADVLVHRLLASALGYR 722
Query: 864 KL-------------YWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAES--LEGR----- 903
+L + RRM K TG+F+ ES LE
Sbjct: 723 ELPDVEPDSLQKQADHCNDRRMASKRVQ------ELSTGLFFAILVRESGPLESEAMVMG 776
Query: 904 ---EALSVAALKYGV 915
+A V L+YGV
Sbjct: 777 VLNQAFDVLVLRYGV 791
>gi|288541382|ref|NP_001165630.1| DIS3 mitotic control homolog (S. cerevisiae)-like 2 isoform 2
[Rattus norvegicus]
gi|149016363|gb|EDL75609.1| similar to RIKEN cDNA 4930429A22 (predicted), isoform CRA_d [Rattus
norvegicus]
Length = 876
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 265/710 (37%), Positives = 378/710 (53%), Gaps = 49/710 (6%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
IF + S E V+E L+KG + + R+N EA+ D+ I G+ A+NRA+ G
Sbjct: 49 IFETYMSKEDVSEGLKKGTLIQGVLRINPKKFHEAFIPSPDGDRDIFIDGVVARNRALNG 108
Query: 219 DFVLIKVDRLSLWAKMKGFSNN--SSIVEDSNLPTEANGMH--SDICKGKSKVDVSYEYS 274
D V++K+ W +K SN+ + ++++ E+ G H KG + DV E
Sbjct: 109 DLVVVKLLPEDQWKGVKPESNDKETEATNETDISEESCGHHLLQKSPKGWNGPDVIIE-- 166
Query: 275 NCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAI 334
DD S + + +G ++ T D ++ SS+ N
Sbjct: 167 ---------AQFDDSDSEDRHGNTSGLVDGMKKLSV---CTPDKGKEDSSAPVMKDENTP 214
Query: 335 ERLSAMISSYPTKRPTGRVVSIIERSPRR--DGIVGFLNVNQWFNYKGGSRKDAKKNRSS 392
+ S + + + +VV I+E+ R GI+ L A KN
Sbjct: 215 KSQDTRALSEKSLQKSAKVVYILEKKHSRAATGILKLL---------------ADKNSDL 259
Query: 393 LSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESP 452
++Y +P+ + P++ V +KD P R ++ T L RI +W E+
Sbjct: 260 F----KKYALFSPSDHRVPRIYVPLKDCPQDFMTRPKDYANT----LFICRIIDWKEDCN 311
Query: 453 FPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEELLSRKD 511
F + G+ GE+EP+ IL E + S FS E L CLP +PW +P EE+ R+D
Sbjct: 312 FALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLECLPQSLPWTIPPEEVGKRRD 371
Query: 512 LRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTS 571
LR CIFTIDPSTA DLDDALS +L+DG VGVHIADVSYFV G++LD A R+TS
Sbjct: 372 LRKDCIFTIDPSTARDLDDALSCRQLTDGTFEVGVHIADVSYFVPEGSSLDKVAAERATS 431
Query: 572 VYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLS 631
VY++Q+ +PMLP LL EE+ SLNP D+L FS+ W L G +++ W GRT+IRSC KLS
Sbjct: 432 VYLVQKVVPMLPRLLCEELCSLNPMTDKLTFSVIWKLTPEGKILEEWFGRTIIRSCTKLS 491
Query: 632 YEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGAL 691
Y+HAQ +I+ + E P + + +V +++ +L+ ++K L+ +RF DGAL
Sbjct: 492 YDHAQSMIENP----TEKIPKEELPPISPEHSIEEVHQAVLNLHSIAKQLRRQRFVDGAL 547
Query: 692 RLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRR 750
RL+ K F D E G P + D N L EEFMLLAN A I R FP+ ALLRR
Sbjct: 548 RLDQLKLAFTLDHETGLPQGCHIYEYRDSNKLVEEFMLLANMAVAHKIFRTFPEQALLRR 607
Query: 751 HPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPM 810
HP P + L + FC + GL +D SS+G ++SL K ++L N +RPM
Sbjct: 608 HPPPQTKMLSDLVEFCDQMGLPMDVSSAGALNKSLTNTFGDDKYSLARKEVLTNMYSRPM 667
Query: 811 QLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
Q+A YFCSG +D + HYAL P+YTHFTSP+RR+ D++VHR L AAL
Sbjct: 668 QMALYFCSGMLQDQAQFRHYALNVPLYTHFTSPIRRFADVIVHRLLAAAL 717
>gi|354497264|ref|XP_003510741.1| PREDICTED: DIS3-like exonuclease 2 isoform 2 [Cricetulus griseus]
Length = 890
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 267/723 (36%), Positives = 384/723 (53%), Gaps = 61/723 (8%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
IF + S E V+E L++G + + R+N EA+ D+ I G+ A+NRA+ G
Sbjct: 49 IFETYMSKEDVSEGLKRGTLIQGVLRINPKKFHEAFIPSPDGDRDIFIDGVVARNRALNG 108
Query: 219 DFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCTL 278
D V++K+ W S + + P E+N ++ + D+S EY L
Sbjct: 109 DLVVVKLLPEDQWKPRITLSLPGVLGLQAAKP-ESNDKETE---ATYEADISEEYCGQHL 164
Query: 279 L--SEKGI---------HHDDDSSSEAYNQEMIEREGYNYINGHHP------STSDSTEK 321
L S KG DD S + + + +G ++ H P S++ T++
Sbjct: 165 LQQSPKGCNSPDVIIEAQFDDSDSEDRHGNTSVLVDGVKELSLHTPDKGKEESSAPVTKE 224
Query: 322 VSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRR--DGIVGFLNVNQWFNYK 379
++S D E+ + + + +VV I+E+ R GI+ L
Sbjct: 225 ENTSTSQDTRALPEK---------SLQKSAKVVYILEKKHSRAATGILKLL--------- 266
Query: 380 GGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMEL 439
A KN ++Y +P+ + P++ V +KD P R ++ T L
Sbjct: 267 ------ADKNSDLF----KKYALFSPSDHRVPRIYVPLKDCPQDFITRPKDYTNT----L 312
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVP 498
RI +W E+ F + G+ GE+EP+ IL E + S FS E L CLP +P
Sbjct: 313 FICRIIDWKEDCNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLECLPQSLP 372
Query: 499 WEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPG 558
W +P +EL R+DLR CIFTIDPSTA DLDDALS L+DG VGVHIADVSYFV G
Sbjct: 373 WTIPPDELGKRRDLRKDCIFTIDPSTARDLDDALSCRPLTDGTFEVGVHIADVSYFVPEG 432
Query: 559 TALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW 618
++L++ A R+TSVY++Q+ +PMLP LL EE+ SLNP D+L FS+ W L G +++ W
Sbjct: 433 SSLNMVAAERATSVYLVQKVVPMLPRLLCEELCSLNPMTDKLTFSVIWKLTPEGKILEEW 492
Query: 619 IGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVS 678
GRTVIRSC KLSY+HAQ +I+ + E P + + +V +++ +L+ ++
Sbjct: 493 FGRTVIRSCTKLSYDHAQSMIENP----TEKLPEEELPPVSPEHSSEEVHQAVLNLHSIA 548
Query: 679 KILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEV 737
K L+ +RF DGALRL+ K F D E G P + D N L EEFMLLAN A
Sbjct: 549 KQLRQQRFVDGALRLDQLKLAFTLDHETGMPQGCHIYEYRDSNKLVEEFMLLANMAVAHK 608
Query: 738 IARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYV 797
I R FP+ ALLRRHP P + L + FC + GL +D SS+G ++SL + K
Sbjct: 609 IFRTFPEQALLRRHPPPQTKMLSDLVEFCDQMGLPMDVSSAGALNKSLTKTFGDDKYSLA 668
Query: 798 LFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLN 857
++L N +RPMQ+A YFCSG +D + HYAL P+YTHFTSP+RR+ D++VHR L
Sbjct: 669 RKEVLTNMYSRPMQMALYFCSGMLQDQAQFRHYALNVPLYTHFTSPIRRFADVIVHRLLA 728
Query: 858 AAL 860
AAL
Sbjct: 729 AAL 731
>gi|281345079|gb|EFB20663.1| hypothetical protein PANDA_006391 [Ailuropoda melanoleuca]
Length = 863
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 287/792 (36%), Positives = 402/792 (50%), Gaps = 84/792 (10%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
IF + S E ++E L++G + + R+N EA+ D+ I G+ A+NRA+ G
Sbjct: 32 IFETYMSKEDISEGLKRGTLIQGVLRINPKKFHEAFIPSPDGDRDIFIDGVVARNRALNG 91
Query: 219 DFVLIKVDRLSLWAKMKGFSNNSSI--VEDSNLPTEANGMH--SDICKGKSKVDVSYEYS 274
D V++++ W +K SN+ + +LP E G H KG Y+
Sbjct: 92 DLVVVRLLPEEQWKVIKPESNDKETEGAYELDLPEELCGSHLPQQSVKG---------YN 142
Query: 275 NCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYIN------GHHPSTSDSTEKVSSSQQN 328
+ + + D DS N + + +G ++ G S + T+ S+S
Sbjct: 143 DSPDVIIEAQFDDSDSEDGHGNTQNVLVDGVKKLSVCVHDKGKEDSDTPVTKDESTSMSQ 202
Query: 329 DGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKK 388
D E+ + + + +VV I+E+ R GFL + A K
Sbjct: 203 DPRALPEK---------SLQRSAKVVYILEKKHSR-AATGFLKLL------------ADK 240
Query: 389 NRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWN 448
N R+Y +P+ + P++ V +KD P R ++ T L RI +W
Sbjct: 241 NSELF----RKYALFSPSDHRVPRIYVPLKDCPQDFVTRPKDYANT----LFICRIVDWK 292
Query: 449 EESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEELL 507
E+S F + G+ GE+EP+ IL E + S FS E L CLP +PW +P EE
Sbjct: 293 EDSNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLDCLPQGLPWTIPPEEFS 352
Query: 508 SRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQV 567
R+DLR CIFTIDPSTA DLDDALS + L+DG VGVHIADVSYFV G+ LD A
Sbjct: 353 KRRDLRKDCIFTIDPSTARDLDDALSCKPLADGNFEVGVHIADVSYFVPEGSPLDKVAAE 412
Query: 568 RSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSC 627
R+TSVY++Q+ +PMLP LL EE+ SL+P D+L FS+ W L G ++ W GRTVIRSC
Sbjct: 413 RATSVYLVQKVVPMLPRLLCEELCSLHPMTDKLTFSVIWTLTPEGKILREWFGRTVIRSC 472
Query: 628 CKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFT 687
KLSYEHAQ +I+ + L P + + +V R++ +L+ ++K L+ +RF
Sbjct: 473 TKLSYEHAQSMIESPTEKIPEKEL----PPISPEHTSEEVHRAVLNLHGIAKELRKQRFV 528
Query: 688 DGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSA 746
DGALRL+ K F D E G P + D N L EEFMLLAN A R FP+
Sbjct: 529 DGALRLDQLKLAFTLDHETGLPQGCHIYEYRDSNKLVEEFMLLANMAVAHKTHRTFPERT 588
Query: 747 LLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYA 806
LLRRHP P + L + FC + GL +D SS+G ++SL + K ++L N
Sbjct: 589 LLRRHPPPQTKMLNDLVEFCEQMGLPMDFSSAGALNKSLTETFGDDKYSLARKEVLTNMC 648
Query: 807 TRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAA------- 859
+RPMQ+A YFCSG +D T + HYAL P+YTHFTSP+RR+ D++VHR L AA
Sbjct: 649 SRPMQMALYFCSGVLQDQTQFRHYALNVPLYTHFTSPIRRFADVLVHRLLAAALGYGELP 708
Query: 860 -LEAEKL-----YWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAES--LEGR-------- 903
LE E L + RRM K TG+F+ ES LE
Sbjct: 709 DLEPEALQKQADHCNDRRMASKRVQ------ELSTGLFFAILVKESGPLESEAMVLGVLN 762
Query: 904 EALSVAALKYGV 915
+A V L+YGV
Sbjct: 763 QAFDVLVLRYGV 774
>gi|301765188|ref|XP_002918016.1| PREDICTED: DIS3-like exonuclease 2-like [Ailuropoda melanoleuca]
Length = 881
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 287/792 (36%), Positives = 402/792 (50%), Gaps = 84/792 (10%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
IF + S E ++E L++G + + R+N EA+ D+ I G+ A+NRA+ G
Sbjct: 49 IFETYMSKEDISEGLKRGTLIQGVLRINPKKFHEAFIPSPDGDRDIFIDGVVARNRALNG 108
Query: 219 DFVLIKVDRLSLWAKMKGFSNNSSI--VEDSNLPTEANGMH--SDICKGKSKVDVSYEYS 274
D V++++ W +K SN+ + +LP E G H KG Y+
Sbjct: 109 DLVVVRLLPEEQWKVIKPESNDKETEGAYELDLPEELCGSHLPQQSVKG---------YN 159
Query: 275 NCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYIN------GHHPSTSDSTEKVSSSQQN 328
+ + + D DS N + + +G ++ G S + T+ S+S
Sbjct: 160 DSPDVIIEAQFDDSDSEDGHGNTQNVLVDGVKKLSVCVHDKGKEDSDTPVTKDESTSMSQ 219
Query: 329 DGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKK 388
D E+ + + + +VV I+E+ R GFL + A K
Sbjct: 220 DPRALPEK---------SLQRSAKVVYILEKKHSR-AATGFLKLL------------ADK 257
Query: 389 NRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWN 448
N R+Y +P+ + P++ V +KD P R ++ T L RI +W
Sbjct: 258 NSELF----RKYALFSPSDHRVPRIYVPLKDCPQDFVTRPKDYANT----LFICRIVDWK 309
Query: 449 EESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEELL 507
E+S F + G+ GE+EP+ IL E + S FS E L CLP +PW +P EE
Sbjct: 310 EDSNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLDCLPQGLPWTIPPEEFS 369
Query: 508 SRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQV 567
R+DLR CIFTIDPSTA DLDDALS + L+DG VGVHIADVSYFV G+ LD A
Sbjct: 370 KRRDLRKDCIFTIDPSTARDLDDALSCKPLADGNFEVGVHIADVSYFVPEGSPLDKVAAE 429
Query: 568 RSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSC 627
R+TSVY++Q+ +PMLP LL EE+ SL+P D+L FS+ W L G ++ W GRTVIRSC
Sbjct: 430 RATSVYLVQKVVPMLPRLLCEELCSLHPMTDKLTFSVIWTLTPEGKILREWFGRTVIRSC 489
Query: 628 CKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFT 687
KLSYEHAQ +I+ + L P + + +V R++ +L+ ++K L+ +RF
Sbjct: 490 TKLSYEHAQSMIESPTEKIPEKEL----PPISPEHTSEEVHRAVLNLHGIAKELRKQRFV 545
Query: 688 DGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSA 746
DGALRL+ K F D E G P + D N L EEFMLLAN A R FP+
Sbjct: 546 DGALRLDQLKLAFTLDHETGLPQGCHIYEYRDSNKLVEEFMLLANMAVAHKTHRTFPERT 605
Query: 747 LLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYA 806
LLRRHP P + L + FC + GL +D SS+G ++SL + K ++L N
Sbjct: 606 LLRRHPPPQTKMLNDLVEFCEQMGLPMDFSSAGALNKSLTETFGDDKYSLARKEVLTNMC 665
Query: 807 TRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAA------- 859
+RPMQ+A YFCSG +D T + HYAL P+YTHFTSP+RR+ D++VHR L AA
Sbjct: 666 SRPMQMALYFCSGVLQDQTQFRHYALNVPLYTHFTSPIRRFADVLVHRLLAAALGYGELP 725
Query: 860 -LEAEKL-----YWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAES--LEGR-------- 903
LE E L + RRM K TG+F+ ES LE
Sbjct: 726 DLEPEALQKQADHCNDRRMASKRVQ------ELSTGLFFAILVKESGPLESEAMVLGVLN 779
Query: 904 EALSVAALKYGV 915
+A V L+YGV
Sbjct: 780 QAFDVLVLRYGV 791
>gi|73994138|ref|XP_852722.1| PREDICTED: DIS3 mitotic control homolog (S. cerevisiae)-like 2
[Canis lupus familiaris]
Length = 879
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 285/793 (35%), Positives = 402/793 (50%), Gaps = 59/793 (7%)
Query: 147 DNPSHQSEARCK---IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTD 203
D S AR K +F + S E V+E L++G + + R+N EA+ D
Sbjct: 32 DKKSKNKSARGKKKSVFETYMSKEDVSEGLKRGTLIQGVLRINPKKFHEAFIPSPDGDRD 91
Query: 204 VLITGIAAQNRAVEGDFVLIKVDRLSLWAKMKGFSNNSSI--VEDSNLPTEANGMHSDIC 261
+ I G+ A+NRA+ GD V++K+ W +K S++ + +LP E G H
Sbjct: 92 IFIDGVVARNRALNGDLVVVKLLPEEQWKVIKPESSDKETEGAYELDLPEELCGSH---- 147
Query: 262 KGKSKVDVSYEYSNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEK 321
S KG + D EA + +G++ D +K
Sbjct: 148 --------------LPQQSMKGYNDSPDVIIEAQFDDSDSEDGHSSTQN---VLVDGVKK 190
Query: 322 VSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG 381
+S + G E A+++ + + + E+S +R V +++ + G
Sbjct: 191 LSVCVHDKGK---EDADALVTKEESTSTSQDTRASPEKSLQRSAKVVYISEKKHSRAATG 247
Query: 382 SRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVA 441
K S L R+Y +P+ + P++ V +KD P R ++ T L
Sbjct: 248 FLKLLADKNSELF---RKYALFSPSDHRVPRIYVPLKDCPQDFVTRPKDYANT----LFI 300
Query: 442 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPWE 500
RI +W E+S F + G+ GE+EP+ IL E + S FS E L CLP +PW
Sbjct: 301 CRIVDWKEDSNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLDCLPQGLPWT 360
Query: 501 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 560
+P EE R+DLR CIFTIDPSTA DLDDALS + L+DG VGVHIADVSYFV G+
Sbjct: 361 IPPEEFSKRRDLRKDCIFTIDPSTARDLDDALSCKPLADGNFEVGVHIADVSYFVPEGSP 420
Query: 561 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIG 620
LD A R+TSVY++Q+ +PMLP LL EE+ SL+P D+L FS+ W L G ++ W G
Sbjct: 421 LDKVAAERATSVYLVQKVVPMLPRLLCEELCSLHPMSDKLTFSVIWTLTPEGKILGEWFG 480
Query: 621 RTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKI 680
RT+IRSC KLSYEHAQ +I+ + E P + + +V R++ +L++++K
Sbjct: 481 RTIIRSCTKLSYEHAQSMIESP----TEKIPEEELPPISPEHTSEEVHRAVLNLHKIAKE 536
Query: 681 LKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 739
L+ +RF DGALRL+ K F D E G P + D N L EEFMLLAN A
Sbjct: 537 LRKQRFVDGALRLDQLKLAFTLDHETGLPQGCHIYEYRDSNKLVEEFMLLANMAVAHKTH 596
Query: 740 RAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLF 799
R FP+ ALLRRHP P + L + FC + GL +D SS+G ++SL + K
Sbjct: 597 RTFPERALLRRHPPPQTKMLNDLMEFCDQMGLPMDFSSAGALNKSLTETFGDDKYSLARK 656
Query: 800 DILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAA 859
++L N +RPMQ+A YFCSG +D + HYAL P+YTHFTSP+RR+ D++VHR L AA
Sbjct: 657 EVLTNMCSRPMQMALYFCSGVLQDQAQFRHYALNVPLYTHFTSPIRRFADVLVHRLLAAA 716
Query: 860 LEAEKLYWKHRRMLPKN----NHREGVRGR---FLTGIFYDKDAAES--LEGR------- 903
L +L L K N R R TG+F+ ES LE
Sbjct: 717 LGYRELPDMEPDTLQKQADHCNDRRMASKRVQELSTGLFFAILVKESGPLESEAMVLGVL 776
Query: 904 -EALSVAALKYGV 915
+A V L+YGV
Sbjct: 777 NQAFDVLVLRYGV 789
>gi|288541376|ref|NP_001165628.1| DIS3-like exonuclease 2 isoform 1 [Mus musculus]
gi|148708251|gb|EDL40198.1| RIKEN cDNA 4930429A22, isoform CRA_d [Mus musculus]
Length = 884
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 280/817 (34%), Positives = 409/817 (50%), Gaps = 111/817 (13%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
IF + S E V+E L++G + + R+N EA+ D+ I G+ A+NRA+ G
Sbjct: 49 IFETYMSKEDVSEGLKRGTLIQGVLRINPKKFHEAFIPSPDGDRDIFIDGVVARNRALNG 108
Query: 219 DFVLIKV-------DRLSL-------WAKMKGFSNNSSI--VEDSNLPTEANGMH--SDI 260
D V++K+ R++L +K SN+ I ++++P E G H
Sbjct: 109 DLVVVKLLPEDQWKPRITLSLPGVLGLQAVKPESNDKEIEATYEADIPEEGCGHHPLQQS 168
Query: 261 CKGKSKVDVSYEYSNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTE 320
KG S DV E DD S + + +G ++ P E
Sbjct: 169 RKGWSGPDVIIE-----------AQFDDSDSEDRHGNTSGLVDGVKKLSISTPDRG--KE 215
Query: 321 KVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRR--DGIVGFLNVNQWFNY 378
S+ D I + + +S ++ + +VV I+E+ R GI+ L
Sbjct: 216 DSSTPVMKDENTPIPQDTRGLSEKSLQK-SAKVVYILEKKHSRAATGILKLL-------- 266
Query: 379 KGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEME 438
A KN ++Y +P+ + P++ V +KD P R ++ T
Sbjct: 267 -------ADKNSDLF----KKYALFSPSDHRVPRIYVPLKDCPQDFMTRPKDFANT---- 311
Query: 439 LVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CV 497
L RI +W E+ F + G+ GE+EP+ IL E + S FS E L CLP +
Sbjct: 312 LFICRIIDWKEDCNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLECLPQSL 371
Query: 498 PWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLP 557
PW +P +E+ R+DLR CIFTIDPSTA DLDDAL+ RL+DG VGVHIADVSYFV
Sbjct: 372 PWTIPPDEVGKRRDLRKDCIFTIDPSTARDLDDALACRRLTDGTFEVGVHIADVSYFVPE 431
Query: 558 GTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR 617
G++LD A R+TSVY++Q+ +PMLP LL EE+ SLNP D+L FS+ W L G +++
Sbjct: 432 GSSLDKVAAERATSVYLVQKVVPMLPRLLCEELCSLNPMTDKLTFSVIWKLTPEGKILEE 491
Query: 618 WIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEV 677
W GRT+IRSC KLSY+HAQ +I+ + E P + + +V +++ +L+ +
Sbjct: 492 WFGRTIIRSCTKLSYDHAQSMIENP----TEKIPEEELPPISPEHSVEEVHQAVLNLHSI 547
Query: 678 SKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 736
+K L+ +RF DGALRL+ K F D E G P + D N L EEFMLLAN A
Sbjct: 548 AKQLRRQRFVDGALRLDQLKLAFTLDHETGLPQGCHIYEYRDSNKLVEEFMLLANMAVAH 607
Query: 737 VIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDY 796
I R FP+ ALLRRHP P + L + FC + GL +D SS+G ++SL + K
Sbjct: 608 KIFRTFPEQALLRRHPPPQTKMLSDLVEFCDQMGLPMDVSSAGALNKSLTKTFGDDKYSL 667
Query: 797 VLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTL 856
++L N +RPMQ+A YFCSG +D + HYAL P+YTHFTSP+RR+ D++VHR L
Sbjct: 668 ARKEVLTNMYSRPMQMALYFCSGMLQDQEQFRHYALNVPLYTHFTSPIRRFADVIVHRLL 727
Query: 857 NAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVP 916
AAL Y + + P ++
Sbjct: 728 AAALG----YSEQPDVEPDTLQKQ------------------------------------ 747
Query: 917 CADILVNVATHCNDRKLACRNVKDACVKLYMWILLKK 953
A HCNDR++A + V++ + L+ +L+K+
Sbjct: 748 --------ADHCNDRRMASKRVQELSIGLFFAVLVKE 776
>gi|118404918|ref|NP_001072804.1| DIS3-like exonuclease 2 [Xenopus (Silurana) tropicalis]
gi|123911962|sp|Q0V9R3.1|DI3L2_XENTR RecName: Full=DIS3-like exonuclease 2
gi|111307895|gb|AAI21426.1| DIS3 mitotic control homolog-like 2 [Xenopus (Silurana) tropicalis]
Length = 834
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 266/714 (37%), Positives = 378/714 (52%), Gaps = 71/714 (9%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
+F + + E V+ L++G+ + R+N EAY D+ I G+ +NRA+ G
Sbjct: 36 VFEAYMTKEEVSAGLKRGELIQGPLRINPKKFHEAYLPSPDGVRDLFIDGVVPRNRALNG 95
Query: 219 DFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANG-----MHSDICKGKSKVDVSYEY 273
D V++K+ W +K + + ED + P + G + + K +K
Sbjct: 96 DVVVVKLLPQEQWKVLK-----NDVCEDDDTPGHSTGNKQHALSPHLMKSSAK------- 143
Query: 274 SNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNA 333
N L+ E + DSS+E +GH + +K Q D + A
Sbjct: 144 -NPDLIIEAKV----DSSAE---------------DGHESALIGCLQKEIKDQ--DKLGA 181
Query: 334 IERLSAMISSYPTK-----RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKK 388
IE ++ T + T +VV I+E+ R GF+ K
Sbjct: 182 IEEKTSKQGDPKTFSDDCFQKTAKVVYILEKKHSR-AATGFI-------------KPLSD 227
Query: 389 NRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWN 448
S L+ R+ +P + P++ V + D P E T L I W
Sbjct: 228 KSSDLA---RKRALFSPVDHRLPRIYVPLGDCPHDFAIHPE----TYANTLFICSITAWR 280
Query: 449 EESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC-VPWEVPQEELL 507
++S F + ++ G+ GE+EP+ IL E + S F + L CLP +PW +PQEE
Sbjct: 281 DDSNFAEGKLMKSLGQAGEIEPETEGILVEYGVDFSDFPDKVLQCLPQDLPWTIPQEEFQ 340
Query: 508 SRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQV 567
RKDLRN CIFTIDP+TA DLDDALS + L DG VGVHIADVSYFV G+ALDI A
Sbjct: 341 KRKDLRNECIFTIDPATARDLDDALSCKPLPDGNFEVGVHIADVSYFVAEGSALDIMASE 400
Query: 568 RSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSC 627
R+TSVY++Q+ IPMLP LL EE+ SLNP DRL FS+ W + G+++D W GR+VI SC
Sbjct: 401 RATSVYLVQKVIPMLPRLLCEELCSLNPMTDRLTFSVIWKITPQGEILDEWFGRSVICSC 460
Query: 628 CKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFT 687
KLSY+HAQ++I+ + L P + Q +++ +++ +L+ +++ L+ +RF
Sbjct: 461 VKLSYDHAQNMINHPDKKIEQHEL----PPVSPQHTINEIHQAVLNLHLIAQNLRKQRFD 516
Query: 688 DGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSA 746
DGALRL+ K F D E G P + D N L EEFMLLAN A I R FP+ A
Sbjct: 517 DGALRLDQLKLTFTLDKESGLPQGCYIYQYRDSNKLVEEFMLLANMAVAHHIYRRFPEEA 576
Query: 747 LLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYA 806
LLRRHP P + L + FC + GLQLD +SSG H+SL E + ++L N
Sbjct: 577 LLRRHPPPQTKMLNDLIEFCDQMGLQLDFTSSGTLHKSLNDQFETDEYSAARKEVLTNMC 636
Query: 807 TRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
+RPMQ+A YFC+G KD+T + HYAL P+YTHFTSP+RR+ D++VHR L A+L
Sbjct: 637 SRPMQMAVYFCTGALKDETLFHHYALNVPLYTHFTSPIRRFADVIVHRLLAASL 690
>gi|288541380|ref|NP_001102477.2| DIS3 mitotic control homolog (S. cerevisiae)-like 2 isoform 1
[Rattus norvegicus]
gi|149016362|gb|EDL75608.1| similar to RIKEN cDNA 4930429A22 (predicted), isoform CRA_c [Rattus
norvegicus]
Length = 890
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 265/717 (36%), Positives = 378/717 (52%), Gaps = 49/717 (6%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
IF + S E V+E L+KG + + R+N EA+ D+ I G+ A+NRA+ G
Sbjct: 49 IFETYMSKEDVSEGLKKGTLIQGVLRINPKKFHEAFIPSPDGDRDIFIDGVVARNRALNG 108
Query: 219 DFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCTL 278
D V++K+ W S ++ + E+N ++ ++ D+S E L
Sbjct: 109 DLVVVKLLPEDQWKPRITLSL-PGVLGLQGVKPESNDKETE---ATNETDISEESCGHHL 164
Query: 279 L--SEKG---------IHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQ 327
L S KG DD S + + +G ++ T D ++ SS+
Sbjct: 165 LQKSPKGWNGPDVIIEAQFDDSDSEDRHGNTSGLVDGMKKLSV---CTPDKGKEDSSAPV 221
Query: 328 NDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRR--DGIVGFLNVNQWFNYKGGSRKD 385
N + S + + + +VV I+E+ R GI+ L
Sbjct: 222 MKDENTPKSQDTRALSEKSLQKSAKVVYILEKKHSRAATGILKLL--------------- 266
Query: 386 AKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARID 445
A KN ++Y +P+ + P++ V +KD P R ++ T L RI
Sbjct: 267 ADKNSDLF----KKYALFSPSDHRVPRIYVPLKDCPQDFMTRPKDYANT----LFICRII 318
Query: 446 EWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQE 504
+W E+ F + G+ GE+EP+ IL E + S FS E L CLP +PW +P E
Sbjct: 319 DWKEDCNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLECLPQSLPWTIPPE 378
Query: 505 ELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIE 564
E+ R+DLR CIFTIDPSTA DLDDALS +L+DG VGVHIADVSYFV G++LD
Sbjct: 379 EVGKRRDLRKDCIFTIDPSTARDLDDALSCRQLTDGTFEVGVHIADVSYFVPEGSSLDKV 438
Query: 565 AQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVI 624
A R+TSVY++Q+ +PMLP LL EE+ SLNP D+L FS+ W L G +++ W GRT+I
Sbjct: 439 AAERATSVYLVQKVVPMLPRLLCEELCSLNPMTDKLTFSVIWKLTPEGKILEEWFGRTII 498
Query: 625 RSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDK 684
RSC KLSY+HAQ +I+ + E P + + +V +++ +L+ ++K L+ +
Sbjct: 499 RSCTKLSYDHAQSMIENP----TEKIPKEELPPISPEHSIEEVHQAVLNLHSIAKQLRRQ 554
Query: 685 RFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFP 743
RF DGALRL+ K F D E G P + D N L EEFMLLAN A I R FP
Sbjct: 555 RFVDGALRLDQLKLAFTLDHETGLPQGCHIYEYRDSNKLVEEFMLLANMAVAHKIFRTFP 614
Query: 744 DSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILI 803
+ ALLRRHP P + L + FC + GL +D SS+G ++SL K ++L
Sbjct: 615 EQALLRRHPPPQTKMLSDLVEFCDQMGLPMDVSSAGALNKSLTNTFGDDKYSLARKEVLT 674
Query: 804 NYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
N +RPMQ+A YFCSG +D + HYAL P+YTHFTSP+RR+ D++VHR L AAL
Sbjct: 675 NMYSRPMQMALYFCSGMLQDQAQFRHYALNVPLYTHFTSPIRRFADVIVHRLLAAAL 731
>gi|26327097|dbj|BAC27292.1| unnamed protein product [Mus musculus]
Length = 831
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 278/811 (34%), Positives = 406/811 (50%), Gaps = 111/811 (13%)
Query: 165 SMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEGDFVLIK 224
S E V+E L++G + + R+N EA+ D+ I G+ A+NRA+ GD V++K
Sbjct: 2 SKEDVSEGLKRGTLIQGVLRINPKKFHEAFIPSPDGDRDIFIDGVVARNRALNGDLVVVK 61
Query: 225 V-------DRLSL-------WAKMKGFSNNSSI--VEDSNLPTEANGMH--SDICKGKSK 266
+ R++L +K SN+ I ++++P E G H KG S
Sbjct: 62 LLPEDQWKPRITLSLPGVLGLQAVKPESNDKEIEATYEADIPEEGCGHHPLQQSRKGWSG 121
Query: 267 VDVSYEYSNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQ 326
DV E DD S + + +G ++ P E S+
Sbjct: 122 PDVIIE-----------AQFDDSDSEDRHGNTSGLVDGVKKLSISTPDRG--KEDSSTPV 168
Query: 327 QNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRR--DGIVGFLNVNQWFNYKGGSRK 384
D I + + +S ++ + +VV I+E+ R GI+ L
Sbjct: 169 MKDENTPIPQDTRGLSEKSLQK-SAKVVYILEKKHSRAATGILKLL-------------- 213
Query: 385 DAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARI 444
A KN ++Y +P+ + P++ V +KD P R ++ T L RI
Sbjct: 214 -ADKNSDLF----KKYALFSPSDHRVPRIYVPLKDCPQDFMTRPKDFANT----LFICRI 264
Query: 445 DEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQ 503
+W E+ F + G+ GE+EP+ IL E + S FS E L CLP +PW +P
Sbjct: 265 IDWKEDCNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLECLPQSLPWTIPP 324
Query: 504 EELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDI 563
+E+ R+DLR CIFTIDPSTA DLDDAL+ RL+DG VGVHIADVSYFV G++LD
Sbjct: 325 DEVGKRRDLRKDCIFTIDPSTARDLDDALACRRLTDGTFEVGVHIADVSYFVPEGSSLDK 384
Query: 564 EAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTV 623
A R+TSVY++Q+ +PMLP LL EE+ SLNP D+L FS+ W L G +++ W GRT+
Sbjct: 385 VAAERATSVYLVQKVVPMLPRLLCEELCSLNPMTDKLTFSVIWKLTPEGKILEEWFGRTI 444
Query: 624 IRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKD 683
IRSC KLSY+HAQ +I+ + E P + + +V +++ +L+ ++K L+
Sbjct: 445 IRSCTKLSYDHAQSMIENP----TEKIPEEELPPISPEHSVEEVHQAVLNLHSIAKQLRR 500
Query: 684 KRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAF 742
+RF DGALRL+ K F D E G P + D N L EEFMLLAN A I R F
Sbjct: 501 QRFVDGALRLDQLKLAFTLDHETGLPQGCHIYEYRDSNKLVEEFMLLANMAVAHKIFRTF 560
Query: 743 PDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDIL 802
P+ ALLRRHP P + L + FC + GL +D SS+G ++SL + K ++L
Sbjct: 561 PEQALLRRHPPPQTKMLSDLVEFCDQMGLPMDVSSAGALNKSLTKTFGDDKYSLARKEVL 620
Query: 803 INYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEA 862
N +RPMQ+A YFCSG +D + HYAL P+YTHFTSP+RR+ D++VHR L AAL
Sbjct: 621 TNMYSRPMQMALYFCSGMLQDQEQFRHYALNVPLYTHFTSPIRRFADVIVHRLLAAALG- 679
Query: 863 EKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILV 922
Y + + P ++
Sbjct: 680 ---YSEQPDVEPDTLQKQ------------------------------------------ 694
Query: 923 NVATHCNDRKLACRNVKDACVKLYMWILLKK 953
A HCNDR++A + V++ + L+ +L+K+
Sbjct: 695 --ADHCNDRRMASKRVQELSIGLFFAVLVKE 723
>gi|417405096|gb|JAA49273.1| Putative exosomal 3'-5' exoribonuclease complex subunit [Desmodus
rotundus]
Length = 881
Score = 427 bits (1098), Expect = e-116, Method: Compositional matrix adjust.
Identities = 267/719 (37%), Positives = 383/719 (53%), Gaps = 65/719 (9%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
IF + S E V+E L++G + + R+N EA+ D+ I G+ A+NRA+ G
Sbjct: 46 IFENYMSKEDVSEGLKRGTLIQGVLRINPKKFHEAFIPSPDGDRDIFIDGVVARNRALNG 105
Query: 219 DFVLIKVDRLSLWAKMKGFSNNSSI--VEDSNLPTEANGMHSDICKGKSKVDVSYEYSNC 276
D V++K+ W +K S++ +S+LP E G H
Sbjct: 106 DLVVVKLLPEEEWKVIKPESSDKETEGAYESDLPEELCGSH------------------- 146
Query: 277 TLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPST-SDSTEKVS-----SSQQNDG 330
L + HDD S + + + G+ +G P D K++ +++ G
Sbjct: 147 --LQQPLKGHDD--SPDVIVEAQCDDSGWEDGHGSTPDVLVDGVGKLAVRVPEMGKEDAG 202
Query: 331 MNAIERLSAMI----SSYPTK--RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRK 384
+ + S + S+ P K + + +VV I+E+ R GFL +
Sbjct: 203 VPVTKDESTSMTQDTSTVPEKSLQRSAKVVYIVEKKHSR-AATGFLKLL----------- 250
Query: 385 DAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARI 444
KN R+Y +P+ + P++ V +KD P R ++ T L RI
Sbjct: 251 -TDKNSELF----RKYALFSPSDHRVPRIYVPLKDCPQEFVTRPKDYANT----LFICRI 301
Query: 445 DEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQ 503
+W E+S F + G+ GE+EP+ IL E + S FS E L CLP +PW++P
Sbjct: 302 VDWKEDSNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLECLPQGLPWKIPP 361
Query: 504 EELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDG-ISRVGVHIADVSYFVLPGTALD 562
EE R+DLR CIFTIDPSTA DLDDALS + L+DG I VGVHIADVSYFV G+ LD
Sbjct: 362 EEFSRRRDLRKDCIFTIDPSTARDLDDALSCKPLADGNIYEVGVHIADVSYFVPEGSELD 421
Query: 563 IEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRT 622
A R+TSVY++Q+ +PMLP +L EE+ SLNP D+L FS+ W L S G ++ W GRT
Sbjct: 422 KVAAQRATSVYLVQKVVPMLPRVLCEELCSLNPMTDKLTFSVIWTLTSEGKILSEWFGRT 481
Query: 623 VIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILK 682
+IRSC KLSYEHAQ +I+ + E P + + +V +++ +L+ ++K L+
Sbjct: 482 IIRSCTKLSYEHAQSMIESP----TQRIPEEELPPVSPEHTSEEVHQAVLNLHRIAKELR 537
Query: 683 DKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARA 741
+RF DGALRL+ K F D E G P + D N L EEFMLLAN A I +
Sbjct: 538 KQRFLDGALRLDQLKLAFTLDHETGLPQGCYIYEYRDSNKLVEEFMLLANMAVAHRIHHS 597
Query: 742 FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDI 801
FP+ ALLRRHP P + L + FC + GL +D SS+G ++SL + K ++
Sbjct: 598 FPERALLRRHPPPQTKMLNDLVEFCDQMGLPMDFSSAGALNKSLTKIFGDDKYSLARKEV 657
Query: 802 LINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
L N +RPMQ+A YFCSG +D+ + HYAL P+YTHFTSP+RR+ D++VHR L A+L
Sbjct: 658 LTNMCSRPMQMALYFCSGVLRDEVQFQHYALNVPLYTHFTSPIRRFADVMVHRLLAASL 716
>gi|159470313|ref|XP_001693304.1| 3'-5' exoribonuclease [Chlamydomonas reinhardtii]
gi|158277562|gb|EDP03330.1| 3'-5' exoribonuclease [Chlamydomonas reinhardtii]
Length = 1061
Score = 424 bits (1090), Expect = e-115, Method: Compositional matrix adjust.
Identities = 253/686 (36%), Positives = 365/686 (53%), Gaps = 108/686 (15%)
Query: 335 ERLSAMISSYPTKRP----TGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKK-- 388
+ + A+++ RP TG+VV+I+ SP+R+ +VG L + + G + A+
Sbjct: 207 DEVKALVTKLSVARPELRITGKVVAILTPSPKREHVVGLLQLGA--SAPGVAALSAQPLP 264
Query: 389 ------------NRSSLSVPDREY--IQLTPTHPKYPKMVVL---VKDLPDSIKKRLEEG 431
+ S+ +VP L P P+ P+ VV +K+LP ++ + L G
Sbjct: 265 AAVAALQAAGSSSGSASTVPSSAVPTCYLMPLDPRLPRCVVRPSELKNLPTALLEELVAG 324
Query: 432 -DATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPES 490
D L++ARI EW+ P + G+ GE+E + A+L I F P+
Sbjct: 325 PDKAENRTLMSARIAEWSSSHTQPAVTLRASLGQAGEIESETAALLEMEGIRSGDFEPDV 384
Query: 491 LSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIAD 550
L+CLP PW + ++++ +R+D R+ IF+IDP TA DLDDALSI L G RVGVHIAD
Sbjct: 385 LACLPPTPWRITEQDIAARRDYRSTRIFSIDPPTAKDLDDALSISPLPGGGWRVGVHIAD 444
Query: 551 VSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNS 610
V++F+ P +ALD+EA R+TS Y++QR IPMLP LL EE+ SLNPGV+R AFS+ W+L++
Sbjct: 445 VAHFIPPFSALDVEAGKRATSTYLVQRVIPMLPPLLCEELCSLNPGVERFAFSVEWELDA 504
Query: 611 AGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRS 670
G + W GR+VIRSC KLSY Q +I+G+FD + QL+G W +VV
Sbjct: 505 KGAIKSTWFGRSVIRSCAKLSYPLVQAMIEGRFDPATCPV------QLHGGATWDEVVGD 558
Query: 671 IKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLA 730
+L+ ++K ++ RF GALRL+ + + D+ G P + +++ N L EEFMLLA
Sbjct: 559 SLALWGLAKQMRAARFAGGALRLDGVRLFYQLDKDGNPLAAAPYVQQEANQLVEEFMLLA 618
Query: 731 NKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAR- 789
N + A+ IA F D A+LRRHP PN KL+ + + GL +D SS+ H L + R
Sbjct: 619 NMSVADCIADTFRDRAMLRRHPPPNATKLKVLQEVAAAAGLPVDVSSAASIHNGLNELRR 678
Query: 790 -----------------EKLKDDYVL---------------------FDILINYATRPMQ 811
E DD + ++L+ ATRPMQ
Sbjct: 679 AAAGAPSAAPQQQQHEEEGGDDDRAVVRSGLAEAGVLGADLERNRRTVELLVMLATRPMQ 738
Query: 812 LASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRR 871
LA YFC+G ++ W HYALA YTHFTSP+RRYPDLVVHR L AALE
Sbjct: 739 LAEYFCTGLVDEEAAWRHYALAVRAYTHFTSPIRRYPDLVVHRLLAAALE---------- 788
Query: 872 MLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDR 931
VR GR ++ AA ++ + + VA HCNDR
Sbjct: 789 ----------VRA-----------------GRLSVEEAAQRHRLLDTRLAGMVAEHCNDR 821
Query: 932 KLACRNVKDACVKLYMWILLKKKEVL 957
+LA RN +D +KLY+ +LL+++ V+
Sbjct: 822 RLAARNAQDGSLKLYLCVLLRRQPVV 847
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%)
Query: 163 HWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEGDFVL 222
H + + G F+ RVNA +R EAY I G+ DVL+ G A QNR+VEGD V
Sbjct: 95 HLDQAELQRGFKSGQIFRGKIRVNAGDRREAYFTIPGLPHDVLLRGDACQNRSVEGDEVA 154
Query: 223 IKVDRLSLWAKMKGFSNNSSIVEDSN 248
+ + L+ W + + + SN
Sbjct: 155 VALQPLAAWFTVNKLAAQLPVGASSN 180
>gi|410924896|ref|XP_003975917.1| PREDICTED: DIS3-like exonuclease 2-like [Takifugu rubripes]
Length = 999
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 259/712 (36%), Positives = 378/712 (53%), Gaps = 71/712 (9%)
Query: 158 KIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVE 217
++F + ++E V+ L++G+ + R+N N AY D+ + GI A+NRA++
Sbjct: 205 QVFESYLTLEEVSHGLKRGELIQGQLRINPKNYQIAYIPSPDDTRDIFLDGIVARNRALD 264
Query: 218 GDFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDI-CKGKSKVDVSYEYSNC 276
GD V+++V W V+ +L + + SD C+ S+ D E N
Sbjct: 265 GDIVVVQVLPQDQWK-----------VDKHSLVQLSVSVKSDSDCQCSSESDSQRE--NV 311
Query: 277 TLLSEKGIH---HDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMN- 332
+EK D + +E+ +++ I + + G S VS G+N
Sbjct: 312 VPAAEKSASPSSRSDLAVAESSDKDDITQNVQDLSLGCPAGKSPEQPSVS------GLNR 365
Query: 333 -AIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRS 391
++R T +VV I+E+ R GFL
Sbjct: 366 EVLQR-------------TAKVVYIVEKKHSR-AATGFLKF------------------- 392
Query: 392 SLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEES 451
VP++ + +P + P++ V + D P+ + R + +T L RI W S
Sbjct: 393 ---VPNKPFAMFSPVDHRVPRINVPLADCPEDFRCRAGDYAST----LYICRITNWEANS 445
Query: 452 PFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEELLSRK 510
F + ++ G+ GE+EP+ IL E + S FS E L CLP +PW +P EE+ RK
Sbjct: 446 NFAEGRLMKTLGQAGEIEPETEGILLEYEVDFSEFSDEVLECLPKNLPWSIPPEEIRKRK 505
Query: 511 DLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRST 570
DLR CIFTIDP+TA DLDDALS +RL DG VGVHIADVSYFV G ALDI A R+T
Sbjct: 506 DLREECIFTIDPATARDLDDALSCKRLPDGNFEVGVHIADVSYFVEEGGALDIIASQRAT 565
Query: 571 SVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKL 630
SVY++Q+ IPMLP LL EE+ SLNP DRL S+ W + G ++ W GRT+IRSC KL
Sbjct: 566 SVYLVQKVIPMLPRLLCEELCSLNPLSDRLTLSVIWKVTPEGKILSEWFGRTIIRSCVKL 625
Query: 631 SYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGA 690
SY+HAQ +I+ + S+ L P + + ++ +++ L+ ++K L+ +RFT GA
Sbjct: 626 SYDHAQSMIEAPEKMFSAGEL----PPMDPEHPIDEIHQAVLDLHAIAKNLRAQRFTGGA 681
Query: 691 LRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLR 749
LRL+ K F D E P + D N L EEFMLLAN A I FP+ ALLR
Sbjct: 682 LRLDQLKLAFTLDKESMMPQGCFVYQYRDSNKLVEEFMLLANIATANHIYARFPEVALLR 741
Query: 750 RHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRP 809
RHP P ++ + E + FC + G+ +D SS+G H+S+ K ++L + +RP
Sbjct: 742 RHPPPKIKMVDELQEFCDQLGIDIDLSSAGALHRSIHATFGDDKYSSARKEVLTHMCSRP 801
Query: 810 MQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 861
MQ+A YFC+G F +T++ HYAL P+YTHFTSP+RRY D++VHR L A+L+
Sbjct: 802 MQMALYFCTGAFNKETNFKHYALNVPLYTHFTSPIRRYADVIVHRLLVASLK 853
>gi|326926024|ref|XP_003209206.1| PREDICTED: DIS3-like exonuclease 2-like [Meleagris gallopavo]
Length = 831
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 276/779 (35%), Positives = 394/779 (50%), Gaps = 97/779 (12%)
Query: 184 RVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEGDFVLIKVDRLSLWAKMK--GFSNNS 241
R+N EA+ D+ I G+ A+NRA+ GD V++++ W +K G +
Sbjct: 41 RINPKKYHEAFIPSPDGTRDIFIDGVVARNRALNGDIVVVRLLPREQWKVIKPDGSDKET 100
Query: 242 SIVEDSNLPTEANG--MHSDICKGKSKV-DVSYEYSNCTLLSEKGIHHDDDSSSEAYNQE 298
+S++P + G + + KG +K DV E +E G H D+ + +
Sbjct: 101 EATHESDVPEDTLGTCVPREAAKGDAKSPDVIIEAQFDDNDAEHGQDHLPDTLAHDIKKL 160
Query: 299 MIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTK--RPTGRVVSI 356
++ G + S T++ + ND RL P K + T +VV I
Sbjct: 161 SLDTTE----KGEQEAGSAITKQEEVPKVND-----PRL------LPDKFLQRTAKVVYI 205
Query: 357 IERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVL 416
+E+ R GF+ + A KN ++ +P + P+ V
Sbjct: 206 LEKKHSR-AATGFIKLL------------ADKNSELF----KKCAMFSPVDHRVPRAYVS 248
Query: 417 VKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAIL 476
+ D P R E+ L RI +W E+S F + G+ GE+EP+ IL
Sbjct: 249 LADCPSDFVARPEDYSNM----LFICRIVDWKEDSNFASGQLAKSLGQAGEIEPETEGIL 304
Query: 477 YENAICCSGFSPESLSCLP-CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIE 535
E + S FSPE+L CLP +PW + E+ R+DLR CIFTIDPSTA DLDDALS +
Sbjct: 305 TEYGVDFSDFSPEALECLPQSLPWVISPGEMAKRRDLRKECIFTIDPSTAKDLDDALSCK 364
Query: 536 RLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNP 595
+L DG VGVHIADVSYFVL TALD A R+TSVY++Q+ IPMLP LL EE+ SLNP
Sbjct: 365 QLPDGNFEVGVHIADVSYFVLEETALDKVASERATSVYLVQKVIPMLPKLLCEELCSLNP 424
Query: 596 GVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGW 655
DRL FS+ W + G ++D W GRTVI SC KLSY+HAQ +I+ V S L
Sbjct: 425 MRDRLTFSVMWKVTPKGKILDEWFGRTVICSCAKLSYDHAQSMIENPGKVFSPEEL---- 480
Query: 656 PQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLS 714
P + Q +++ +++ +L+ +++ L+ +RF DGALRL+ K F D E G P +
Sbjct: 481 PPISPQHSVAEIQQAVLNLHRIAQHLRKQRFIDGALRLDQLKLSFTLDQESGMPQGCYIY 540
Query: 715 GREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLD 774
D N L EEFMLLAN A I R+FP+ ALLRRHP P + L + FC + GL++D
Sbjct: 541 QYRDSNKLVEEFMLLANMAVAHQIYRSFPEQALLRRHPPPQSKLLNDLMEFCHQVGLEID 600
Query: 775 TSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAF 834
SS+G H+SL + K ++L N +RPMQ+A YFC+G KD+T + HYAL
Sbjct: 601 FSSAGSLHKSLNETFGADKYSEARKEVLTNMFSRPMQMALYFCTGVLKDETLFRHYALNV 660
Query: 835 PVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDK 894
P YTHFTSP+RRY D+VVHR L+A+L P +E ++ +
Sbjct: 661 PFYTHFTSPIRRYADVVVHRLLSASLGISS---------PVKMEKEAIQRQ--------- 702
Query: 895 DAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKK 953
A HCNDRK+A + V++ L+ + +++
Sbjct: 703 ------------------------------AEHCNDRKMASKRVQELSTDLFFAVFVRE 731
>gi|432107185|gb|ELK32599.1| DIS3-like exonuclease 2, partial [Myotis davidii]
Length = 881
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 288/807 (35%), Positives = 405/807 (50%), Gaps = 111/807 (13%)
Query: 164 WSMEAVNEALEKGDAFK--ALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEGDFV 221
W+ E + E + K D K + R+N EA+ D+ I GI A+NRA+ GD V
Sbjct: 49 WASE-IKEKINKWDYIKLRGVLRINPKKFHEAFIPSPDGDRDIFIDGIVARNRALNGDLV 107
Query: 222 LIKVDRLSLWAKMKGFSNNSSI--VEDSNLPTEANGMH--SDICKGKS-KVDVSYEYSNC 276
++K+ W +K S++ +S+LP E G H KG + DV E
Sbjct: 108 VVKLLPEEQWKVIKPESSDKETEGAYESDLPEEICGSHLLQQSLKGHNDSPDVIIEAQ-- 165
Query: 277 TLLSEKGIHHDDDSSSEAYNQEMIEREGYNYIN------GHHPSTSDSTEKVSSSQQNDG 330
D DS N + + +G ++ G + + ST+ S+S D
Sbjct: 166 --------FEDSDSEDGHGNIQHVLVDGVKKLSVCVQEKGEEDAGAPSTKDESTSMAQDT 217
Query: 331 MNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNR 390
ER + + + +VV I+E+ R GFL + A KN
Sbjct: 218 SALPER---------SLQRSAKVVYIVEKKHSR-AATGFLKLL------------ADKNS 255
Query: 391 SSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEE 450
R+Y +P+ + P++ V +KD P R ++ T L RI +W E+
Sbjct: 256 ELF----RKYALFSPSDHRVPRIYVPLKDCPQDFVTRPKDYANT----LFICRIVDWKED 307
Query: 451 SPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC-VPWEVPQEELLSR 509
S F + G+ GE+EP+ IL E + S FS E L CLP +PW +P EE R
Sbjct: 308 SNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLECLPQDLPWTIPPEEFSKR 367
Query: 510 KDLRNFCIFTIDPSTATDLDDALSIERLSDGIS-RVGVHIADVSYFVLPGTALDIEAQVR 568
+DLR CIFTIDPSTA DLDDALS + L+DG + VGVHIADVSYFV G+ LD A R
Sbjct: 368 RDLRKDCIFTIDPSTARDLDDALSCKLLADGNTYEVGVHIADVSYFVPDGSELDQVAAQR 427
Query: 569 STSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCC 628
+TSVY++Q+ IPMLP L EE+ SLNP D+L FS+ W L S G ++ W GRT+I SC
Sbjct: 428 ATSVYLVQKVIPMLPRALCEELCSLNPMTDKLTFSVIWTLTSEGKILSEWFGRTIICSCT 487
Query: 629 KLSYEHAQDIIDGKFDVESSNTLGEG-WPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFT 687
KLSYEHAQ +I+ + T+ E P + + +V +++ +L++++K L+ +RF
Sbjct: 488 KLSYEHAQSMIES-----PTKTIPEQELPPISPEHTSEEVHQAVLNLHQIAKELRKQRFL 542
Query: 688 DGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSA 746
DGALRL+ K F D E G P + D N L EEFMLLAN A I RAFP+ A
Sbjct: 543 DGALRLDQLKLAFTLDHETGLPQGCHIYEYRDSNKLVEEFMLLANMAVAHKIYRAFPERA 602
Query: 747 LLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYA 806
LLRRHP P + L + FC + GL +D +SSG ++SL + K ++L +
Sbjct: 603 LLRRHPPPQTKMLNDLVEFCDQMGLPMDFTSSGALNKSLTEIFGDDKYSLARKEVLTSMC 662
Query: 807 TRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
+RPMQ+A YFCSG +D + HYAL P+YTHFTSP+RR+ D++VHR L A L
Sbjct: 663 SRPMQMALYFCSGMLRDQEQFRHYALNVPLYTHFTSPIRRFADVMVHRLLAATL------ 716
Query: 867 WKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVAT 926
R LP D S+ ++A
Sbjct: 717 --GYRELP--------------------DVEPSVLQKQA--------------------D 734
Query: 927 HCNDRKLACRNVKDACVKLYMWILLKK 953
HCNDR++A + V + L+ IL+K+
Sbjct: 735 HCNDRRMASKRVHELSTSLFFAILVKE 761
>gi|348531798|ref|XP_003453395.1| PREDICTED: DIS3-like exonuclease 2-like [Oreochromis niloticus]
Length = 1042
Score = 417 bits (1073), Expect = e-113, Method: Compositional matrix adjust.
Identities = 254/709 (35%), Positives = 369/709 (52%), Gaps = 77/709 (10%)
Query: 155 ARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNR 214
++ ++F + + E V+ L++G+ + R+N EA+ D+ + GI A+NR
Sbjct: 263 SKKQVFDAYMTSEEVSHGLKRGELIQGQLRINPKKYNEAFVPSPDDTRDIFLDGIVARNR 322
Query: 215 AVEGDFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYS 274
A+ GD V+++V W ++ ++ E S+ PT S V V + S
Sbjct: 323 ALNGDIVVVQVLPREQWKVVRSDTDCEGASE-SDTPTVQTATKKTKSTPSSAVIVEEQCS 381
Query: 275 NCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAI 334
D D + Y ER G PST S ++
Sbjct: 382 ------------DRDEQNNKYQNISGERLG-------EPSTPRSNGEILQK--------- 413
Query: 335 ERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLS 394
T +VV I+E+ R GFL
Sbjct: 414 ---------------TAKVVYIVEKKHSR-AATGFLK----------------------H 435
Query: 395 VPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFP 454
+PD+ + +P + P++ V + D P+ R GD L RI +W +S F
Sbjct: 436 LPDKPFALFSPVDHRVPRINVPLADCPEDFSSR--PGD--YNNILFICRITDWAADSNFA 491
Query: 455 QAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEELLSRKDLR 513
+ + G+ GE+EP+ IL E + S FS E L CLP +PW +P EE+ R+DLR
Sbjct: 492 EGRLAKSLGQAGEIEPETEGILIEYEVDFSEFSDEVLDCLPKNLPWTIPPEEMRKRRDLR 551
Query: 514 NFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVY 573
N CIFTIDP+TA DLDDALS ++L DG VGVHIADVSYFV G +LD+ A R+TSVY
Sbjct: 552 NECIFTIDPATARDLDDALSCKQLPDGNFEVGVHIADVSYFVEEGNSLDVIASQRATSVY 611
Query: 574 MLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYE 633
++Q+ IPMLP LL EE+ SLNP VDRL FS+ W L G +++ W GR++IRSC KLSY+
Sbjct: 612 LVQKVIPMLPRLLCEELCSLNPLVDRLTFSVIWTLTPEGKILNEWFGRSIIRSCVKLSYD 671
Query: 634 HAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRL 693
HAQ +I+ + S+ L P + +V +++ +L+ ++K L+ +RF GALRL
Sbjct: 672 HAQSMIEAPEKMFSAEEL----PPVDPMHPIDEVHQAVLNLHAIAKNLRAQRFLGGALRL 727
Query: 694 ENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHP 752
+ K F D E P + D N L EEFMLLAN A I R FP+ ALLRRHP
Sbjct: 728 DQLKLSFTLDKETMMPQGCYIYQYRDSNKLVEEFMLLANIATANHIYRKFPELALLRRHP 787
Query: 753 APNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQL 812
P + + E + C + G+++D SS+G H+SL A + ++L + +RPMQ+
Sbjct: 788 PPKAKMMDELQELCDQLGIKIDLSSAGLLHKSLNTAFGDDEYTSARKEVLTHMCSRPMQM 847
Query: 813 ASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 861
A YFC+G K++ ++ HYAL P+YTHFTSP+RRY D++VHR L ++L+
Sbjct: 848 ALYFCTGVVKEEQNFKHYALNVPLYTHFTSPIRRYADIIVHRLLASSLK 896
>gi|432913204|ref|XP_004078957.1| PREDICTED: DIS3-like exonuclease 2-like [Oryzias latipes]
Length = 833
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 260/759 (34%), Positives = 377/759 (49%), Gaps = 107/759 (14%)
Query: 145 KDDNPSHQSEARCK----------IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAY 194
KD P + +CK +F P+ ++E V+ L++G+ + R+N EA+
Sbjct: 35 KDKTPQNPRADKCKSKRGRGLKKQVFEPYMTLEDVSHGLKRGELIQGQLRINPKKYHEAF 94
Query: 195 CKIEGVQTDVLITGIAAQNRAVEGDFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEAN 254
+ D+ + G+ A+NRA+ GD V++++ W +K ++
Sbjct: 95 IPSPDDKWDIFLEGVEARNRALNGDIVVVELLPQEQWKVVKSDAD--------------- 139
Query: 255 GMHSDICKGKSKVDVSYEYSNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPS 314
C G S+ + S E + R N PS
Sbjct: 140 ------CDGASESETSVETT---------------------------RNKTRVPNPDPPS 166
Query: 315 TSDSTEKVSSSQQN---DGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLN 371
SD E V Q+ D E S ++ T + T +VV I+E+ R + G L
Sbjct: 167 DSDCNELVDRCQKVALVDTGKPQEGSSTPQTNEKTLQKTAKVVYIVEKKHSR-AVTGSLK 225
Query: 372 VNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEG 431
PD+ + +P + P++ V + D P+ R E
Sbjct: 226 F----------------------FPDKPFALFSPVDHRVPRINVPLSDCPEDFNIRPEVY 263
Query: 432 DATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL 491
T L RI +W ++ F Q + G+ GE+EP+ IL E+++ S F+PE L
Sbjct: 264 ANT----LFICRITDWTADNAFAQGRLAKTLGQAGEIEPETEGILTEHSVDFSDFTPEVL 319
Query: 492 SCLPCV-PWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIAD 550
CLP PW +P EEL RKDLR CIFTIDP+TA DLDDALS + L DG VGVHIAD
Sbjct: 320 ECLPQPRPWCIPPEELEKRKDLRRDCIFTIDPATARDLDDALSCKLLPDGNFEVGVHIAD 379
Query: 551 VSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNS 610
VSYFV TALD A R+TSVY++Q+ +PMLP LL EE+ SLNP DRL FS+ W L
Sbjct: 380 VSYFVKEDTALDEAASQRATSVYLVQQVVPMLPRLLCEELCSLNPDFDRLTFSVIWKLTP 439
Query: 611 AGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRS 670
G ++ W GR+VIRSC KLSY+HAQ +I+ + S N L P + ++ +
Sbjct: 440 EGKILSEWFGRSVIRSCAKLSYDHAQSMIEAPEKLFSPNELQLDNP----EHPIDEIHEA 495
Query: 671 IKSLYEVSKILKDKRFTDGALRLENSKPVF-LFDEYGTPYDSVLSGREDLNFLFEEFMLL 729
+ L+ +++ L+ +R + G L+L+ K F + E P + +D N L EEFMLL
Sbjct: 496 VLRLHSIAQNLRRQRISTGTLKLDQVKLSFNINKESMMPNSCSVYEYKDSNRLVEEFMLL 555
Query: 730 ANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAR 789
AN A I R FPD ALLRRHP P + + E + CS+ G+ +D SS G +SL
Sbjct: 556 ANIATAHHIHRKFPDLALLRRHPPPKTKMMEELKEMCSQLGIDIDLSSPGALQESLNNLT 615
Query: 790 EKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPD 849
K + +L + ++PMQ+A YFCSG K++ + HYAL P+YTHFTSP+RRY D
Sbjct: 616 GKDEYSAARKAVLTHLCSKPMQMALYFCSGMLKNEQLFKHYALNIPLYTHFTSPIRRYAD 675
Query: 850 LVVHRTLNAAL-------------EAEKLYWKHRRMLPK 875
++VHR L ++L E + L+ +++ML K
Sbjct: 676 IIVHRLLASSLKCGPHLQLSAQEVEKQALHCNNKKMLAK 714
>gi|260831758|ref|XP_002610825.1| hypothetical protein BRAFLDRAFT_134221 [Branchiostoma floridae]
gi|229296194|gb|EEN66835.1| hypothetical protein BRAFLDRAFT_134221 [Branchiostoma floridae]
Length = 813
Score = 410 bits (1055), Expect = e-111, Method: Compositional matrix adjust.
Identities = 230/559 (41%), Positives = 308/559 (55%), Gaps = 58/559 (10%)
Query: 397 DREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQA 456
DRE + +P + P++ V ++D P K+R E+ L ARI +W E+S F +A
Sbjct: 221 DREKVLFSPIDHRLPRLKVPLEDCPAGFKERPEDHAKF----LFIARITDWKEDSGFAEA 276
Query: 457 HVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC-VPWEVPQEELLSRKDLRNF 515
+ G G++EP+ +L EN + S FS L CLP +PW +P EE +R+DLR
Sbjct: 277 RLAKSLGEAGQIEPETEGLLVENGVDFSEFSEVVLQCLPQDLPWSIPAEEFENRRDLRLD 336
Query: 516 CIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYML 575
CIFTIDP+TA DLDDA+S +L DG VGVHIADVSYF+ TALD+ A R+TSVY++
Sbjct: 337 CIFTIDPATARDLDDAVSCNKLDDGTYEVGVHIADVSYFIQENTALDLTAACRATSVYLV 396
Query: 576 QRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHA 635
Q+ IPMLP LL E++ SLNP +RLAFS+ W L GDV+D W GRT+IRSC KLSY+HA
Sbjct: 397 QKVIPMLPRLLCEQLCSLNPAEERLAFSVIWKLTETGDVLDEWFGRTIIRSCVKLSYDHA 456
Query: 636 QDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLEN 695
Q IID + + L P + DV + +LY++S+ L+ KRF GALRL+
Sbjct: 457 QSIIDNPDQLPTQEQL----PTISDGHSIQDVAERVLNLYKISQNLRKKRFDGGALRLDQ 512
Query: 696 SKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAP 754
K F D E G P + D N L EEFMLLAN A I +FP+ A+LRRHP P
Sbjct: 513 PKLAFSLDPESGLPNGCSVYQIRDSNRLIEEFMLLANMAVAHKIHESFPERAVLRRHPPP 572
Query: 755 NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLAS 814
+ + + C G+ LD SSSG HQS+ + + F IL A++PMQLA
Sbjct: 573 QPKMVEDLVKTCGTMGINLDISSSGALHQSIARYIGDDVETQATFYILTAMASKPMQLAK 632
Query: 815 YFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLP 874
YFCSG ++ + HYAL P+YTHFTSP+RRY D++VHR L A L K
Sbjct: 633 YFCSGCLPEEGMYHHYALNVPLYTHFTSPIRRYADVLVHRLLGACLGCGPAVEK------ 686
Query: 875 KNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLA 934
+AE L+G + HCNDRK A
Sbjct: 687 ---------------------SAEELQG---------------------MTDHCNDRKDA 704
Query: 935 CRNVKDACVKLYMWILLKK 953
+ V++A ++ +K+
Sbjct: 705 SKRVQEASADMFFASFVKE 723
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 42/72 (58%)
Query: 160 FAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEGD 219
F + S EAV E L+KGD K R+NA N +AY +D+ I G+ A+NRA+ GD
Sbjct: 1 FEQYISREAVAEGLKKGDFIKGALRINARNFEDAYVPAPDGMSDLYIPGLHARNRALNGD 60
Query: 220 FVLIKVDRLSLW 231
V++KV S W
Sbjct: 61 IVVLKVLPRSEW 72
>gi|402889706|ref|XP_003908148.1| PREDICTED: DIS3-like exonuclease 2-like, partial [Papio anubis]
Length = 765
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 248/647 (38%), Positives = 339/647 (52%), Gaps = 88/647 (13%)
Query: 309 NGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVG 368
+G P T D T +S + +++R + +VV I+E+ R G
Sbjct: 82 DGDAPVTKDETTCISQDTRALPEKSLQR-------------SAKVVYILEKKHSR-AATG 127
Query: 369 FLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRL 428
FL + A KN R+Y +P+ + P++ V +KD P R
Sbjct: 128 FLKLL------------ADKNSELF----RKYALFSPSDHRVPRIYVPLKDCPQDFVARP 171
Query: 429 EEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSP 488
++ T L RI +W E+ F + G+ GE+EP+ IL E + S FS
Sbjct: 172 KDYANT----LFICRIVDWKEDCNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSS 227
Query: 489 ESLSCLP-CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVH 547
E L CLP +PW +P EE R+DLR CIFTIDPSTA DLDDALS + L+DG VGVH
Sbjct: 228 EVLECLPQGLPWTIPPEEFSKRRDLRKDCIFTIDPSTARDLDDALSCKPLADGNFEVGVH 287
Query: 548 IADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWD 607
IADVSYFV G+ LD A R+TSVY++Q+ +PMLP LL EE+ SLNP D+L FS+ W
Sbjct: 288 IADVSYFVPEGSDLDKVAAERATSVYLVQKVVPMLPRLLCEELCSLNPMSDKLTFSVIWT 347
Query: 608 LNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDV 667
L G ++D W GRT+I SC KLSYEHAQ +I+ + + L P + + +V
Sbjct: 348 LTPEGKILDEWFGRTIICSCTKLSYEHAQSMIESPTEKIPAKEL----PPISPEHSSEEV 403
Query: 668 VRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEF 726
+++ +L++++K L+ +RF DGALRL+ K F D E G P + D N L EEF
Sbjct: 404 QQAVLNLHQIAKQLRQQRFADGALRLDQLKLAFTLDHETGLPQGCHIYEYRDSNKLVEEF 463
Query: 727 MLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLE 786
MLLAN A I RAFP+ ALLRRHP P R L + FC + GL +D SS+G ++SL
Sbjct: 464 MLLANMAVAHKIHRAFPEQALLRRHPPPQTRMLNDLVEFCDQMGLPVDFSSAGALNKSLT 523
Query: 787 QAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRR 846
Q K ++L N +RPMQ+A YFCSG +D + HYAL P+YTHFTSP+RR
Sbjct: 524 QTFGDDKYSLARKEVLTNMCSRPMQMALYFCSGLLQDPAQFRHYALNVPLYTHFTSPIRR 583
Query: 847 YPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREAL 906
+ D++VHR L AAL RE L
Sbjct: 584 FADVLVHRLLAAALGY----------------------------------------REQL 603
Query: 907 SVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKK 953
+A D L A HCNDR++A + V++ L+ +L+K+
Sbjct: 604 DMA--------PDTLQKQADHCNDRRMASKRVQELSTGLFFAVLVKE 642
>gi|255076623|ref|XP_002501986.1| predicted protein [Micromonas sp. RCC299]
gi|226517251|gb|ACO63244.1| predicted protein [Micromonas sp. RCC299]
Length = 1069
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 256/660 (38%), Positives = 362/660 (54%), Gaps = 75/660 (11%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQ------------------WFNYKGGSRKDAKKN 389
RPTGRVV++ + SPRR+ +VG++ + N +GG+ A +
Sbjct: 284 RPTGRVVAVSQTSPRRETVVGYVGFAEEEFGFGGGRNGKGGTGVPTRNPEGGTGTPASRK 343
Query: 390 RSSLSVPDR-EYIQLTPTHPKYPKMVVLVKD--LPDSIKK-RLEEGDATIEMELVAARID 445
PD ++L PT PK P M+V + LP I +E G A ++ LV+AR+
Sbjct: 344 GKEERYPDNIPPLRLYPTDPKLPWMIVDMSPSFLPAPIAALAVENGGAGLKGILVSARVS 403
Query: 446 EWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAIC-CSGFSPESLSCLPCVP------ 498
+W+ +P + G GE+E + A++ EN I F+ +L+CLP VP
Sbjct: 404 KWSTSYVWPHCQLRESLGMAGELETETAALVAENNILGVEDFTEAALACLPAVPPKESGL 463
Query: 499 -WEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLP 557
W+VP+ E +R+D + +IDP TA DLDDAL E DG VGVHIADVS+F+
Sbjct: 464 TWKVPEAERAARRDFTGVRVASIDPPTARDLDDALHAETRPDGTLVVGVHIADVSHFIPA 523
Query: 558 GTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR 617
G+ALD EAQ R+TS Y++QR +PMLP LL E++ SLNPGV+RL FS+ W++ G V
Sbjct: 524 GSALDKEAQQRATSTYLVQRVMPMLPRLLCEDLCSLNPGVERLTFSVEWEMTPDGVVKSE 583
Query: 618 WIGRTVIRSCCKLSYEHAQDII----DGKFDV--------ESSNTLGEGWPQLYGQFEW- 664
W GR +I+SC KL Y AQ +I +G+ V + S + G P+ G W
Sbjct: 584 WFGRGIIKSCAKLDYGVAQRVIEARDEGRTGVDELLEAVNDPSGPVKVG-PEDGGPGSWD 642
Query: 665 -SDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFL 722
S V +I L ++ ++ +RF GA+RL+ SK F D + G P + + N L
Sbjct: 643 PSAVAETISLLNTAARAMRRRRFEGGAVRLDQSKLSFEIDPDTGNPRGASAYVIRESNKL 702
Query: 723 FEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFH 782
EE+ML+AN A IA A+PD A+LR HP PN RK+ E E F + G+ +D SSS H
Sbjct: 703 VEEWMLMANNAVATFIADAYPDRAMLRCHPEPNERKMGELEQFSREQGIDIDASSSRALH 762
Query: 783 QSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTS 842
SL++ +E+ D Y + ++ AT PMQLA YFC+G +D+ WGHYALA YTHFTS
Sbjct: 763 LSLQRLKEQSADAYEVAQLM---ATLPMQLARYFCTG-CQDEDSWGHYALAMDRYTHFTS 818
Query: 843 PLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEG 902
P+RRYPD+VVHR L AALEA G RGR +K + +
Sbjct: 819 PIRRYPDVVVHRLLAAALEA------------------GFRGRG------NKKHPRAPK- 853
Query: 903 REALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLFSCLI 962
R ++ AA K+G+P +D L +A HCN+RKLA +N +D + Y+ L+ S ++
Sbjct: 854 RADINAAAKKFGIPKSDKLQAIADHCNERKLAAKNCQDGSMHAYLCAFLRASPQCVSGIV 913
>gi|344292594|ref|XP_003418011.1| PREDICTED: DIS3-like exonuclease 2 [Loxodonta africana]
Length = 885
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 280/820 (34%), Positives = 397/820 (48%), Gaps = 125/820 (15%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
IF + S E V+E L++G + + R+N EA+ D+ I G+ A+NRA+ G
Sbjct: 49 IFETYMSKEEVSEGLKRGTLIQGVLRINPKKFHEAFIPSPDGDRDIFIDGVVARNRALNG 108
Query: 219 DFVLIKVDRLSLWAKMKGFSNN--SSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNC 276
D V++++ W K SN+ + +S++P E G H ++ +YE S
Sbjct: 109 DLVVVRLLPEEQWKVTKPESNDKEADAANESDIPEELCGRHP-----PTQAPKNYEDSPD 163
Query: 277 TLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVS-----SSQQNDGM 331
++ E D Q ++ D +K+S + +N G
Sbjct: 164 VII-EAQFDGSDAEDGHGNTQNVL---------------VDGVQKLSVCVRTTGGENAGA 207
Query: 332 NAIERLSAMISSYPTKRP------TGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKD 385
+ + S P P + +VV I+E+ R G L +
Sbjct: 208 AVTKEENTFTSQDPRASPEKSLQKSAKVVYILEKKHSR-AATGLLKLL------------ 254
Query: 386 AKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARID 445
A KN R+Y +P+ + P++ V +KD P R ++ T L RI
Sbjct: 255 ADKNSELF----RKYALFSPSDHRVPRIYVPLKDCPQDFVTRPKDYANT----LFICRIV 306
Query: 446 EWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQE 504
+W E+S F + G+ GE+EP+ IL E + S FS E L CLP +PW +PQE
Sbjct: 307 DWKEDSNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLKCLPQSLPWTIPQE 366
Query: 505 ELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIE 564
E R+DLR CIFTIDPSTA DLDDALS + L+DG VGVHIADVSYFV G+ LD
Sbjct: 367 EFSKRRDLRKDCIFTIDPSTARDLDDALSCKPLADGNFEVGVHIADVSYFVPDGSDLDRL 426
Query: 565 AQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVI 624
A R+TSVY++Q+ +PMLP LL EE+ SLNP D+L FS+ W L G ++ W GRT+I
Sbjct: 427 AAERATSVYLVQKVVPMLPRLLCEELCSLNPMTDKLTFSVIWTLTPEGKILSEWFGRTII 486
Query: 625 RSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDK 684
RSC KLSYEHAQ +I+ L P + + +V +++ +L+ ++K L+ +
Sbjct: 487 RSCTKLSYEHAQSMIESPAQPVPEKAL----PPISPEHTSQEVHQAVLNLHRIAKELRKQ 542
Query: 685 RFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFP 743
RF GALRL+ K F D E G P + D N L +EFMLL N A + RAFP
Sbjct: 543 RFVGGALRLDQLKLAFTLDHETGLPQGCHVYEYRDSNKLMKEFMLLGNMAVAHKVQRAFP 602
Query: 744 DSALLRRHPAPNMRKLREFEAFCSKHGLQLD-------TSSSGQFHQSLEQAREKLKDD- 795
+ ALL +P L + C + GL+ T S + Q + E DD
Sbjct: 603 ERALLAPYPLSQTGCL----STCGRQGLRASPEPDLYVTRVSWVYLQ--KSLTETFGDDT 656
Query: 796 YVLF--DILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVH 853
Y L ++L N +RPMQ+A YFCSG +D T + HYAL P+YTHFTSP+RR+PDL+VH
Sbjct: 657 YSLARKEVLTNMCSRPMQMALYFCSGMLEDRTQFRHYALNIPLYTHFTSPIRRFPDLMVH 716
Query: 854 RTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKY 913
R L AAL G R A LE
Sbjct: 717 RLLAAAL--------------------GYR------------ALPDLE------------ 732
Query: 914 GVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKK 953
D + A HCNDR++A + V++ L+ +L+K+
Sbjct: 733 ----PDAVQKQADHCNDRRMASKRVQELSTSLFFAVLVKE 768
>gi|149016360|gb|EDL75606.1| similar to RIKEN cDNA 4930429A22 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 650
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/465 (44%), Positives = 282/465 (60%), Gaps = 10/465 (2%)
Query: 398 REYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAH 457
++Y +P+ + P++ V +KD P R ++ T L RI +W E+ F
Sbjct: 74 KKYALFSPSDHRVPRIYVPLKDCPQDFMTRPKDYANT----LFICRIIDWKEDCNFALGQ 129
Query: 458 VLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEELLSRKDLRNFC 516
+ G+ GE+EP+ IL E + S FS E L CLP +PW +P EE+ R+DLR C
Sbjct: 130 LAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLECLPQSLPWTIPPEEVGKRRDLRKDC 189
Query: 517 IFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQ 576
IFTIDPSTA DLDDALS +L+DG VGVHIADVSYFV G++LD A R+TSVY++Q
Sbjct: 190 IFTIDPSTARDLDDALSCRQLTDGTFEVGVHIADVSYFVPEGSSLDKVAAERATSVYLVQ 249
Query: 577 RKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQ 636
+ +PMLP LL EE+ SLNP D+L FS+ W L G +++ W GRT+IRSC KLSY+HAQ
Sbjct: 250 KVVPMLPRLLCEELCSLNPMTDKLTFSVIWKLTPEGKILEEWFGRTIIRSCTKLSYDHAQ 309
Query: 637 DIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENS 696
+I+ + E P + + +V +++ +L+ ++K L+ +RF DGALRL+
Sbjct: 310 SMIENP----TEKIPKEELPPISPEHSIEEVHQAVLNLHSIAKQLRRQRFVDGALRLDQL 365
Query: 697 KPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPN 755
K F D E G P + D N L EEFMLLAN A I R FP+ ALLRRHP P
Sbjct: 366 KLAFTLDHETGLPQGCHIYEYRDSNKLVEEFMLLANMAVAHKIFRTFPEQALLRRHPPPQ 425
Query: 756 MRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASY 815
+ L + FC + GL +D SS+G ++SL K ++L N +RPMQ+A Y
Sbjct: 426 TKMLSDLVEFCDQMGLPMDVSSAGALNKSLTNTFGDDKYSLARKEVLTNMYSRPMQMALY 485
Query: 816 FCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
FCSG +D + HYAL P+YTHFTSP+RR+ D++VHR L AAL
Sbjct: 486 FCSGMLQDQAQFRHYALNVPLYTHFTSPIRRFADVIVHRLLAAAL 530
>gi|148708248|gb|EDL40195.1| RIKEN cDNA 4930429A22, isoform CRA_a [Mus musculus]
Length = 630
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/465 (44%), Positives = 283/465 (60%), Gaps = 10/465 (2%)
Query: 398 REYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAH 457
++Y +P+ + P++ V +KD P R ++ T L RI +W E+ F
Sbjct: 54 KKYALFSPSDHRVPRIYVPLKDCPQDFMTRPKDFANT----LFICRIIDWKEDCNFALGQ 109
Query: 458 VLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEELLSRKDLRNFC 516
+ G+ GE+EP+ IL E + S FS E L CLP +PW +P +E+ R+DLR C
Sbjct: 110 LAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLECLPQSLPWTIPPDEVGKRRDLRKDC 169
Query: 517 IFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQ 576
IFTIDPSTA DLDDAL+ RL+DG VGVHIADVSYFV G++LD A R+TSVY++Q
Sbjct: 170 IFTIDPSTARDLDDALACRRLTDGTFEVGVHIADVSYFVPEGSSLDKVAAERATSVYLVQ 229
Query: 577 RKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQ 636
+ +PMLP LL EE+ SLNP D+L FS+ W L G +++ W GRT+IRSC KLSY+HAQ
Sbjct: 230 KVVPMLPRLLCEELCSLNPMTDKLTFSVIWKLTPEGKILEEWFGRTIIRSCTKLSYDHAQ 289
Query: 637 DIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENS 696
+I+ + E P + + +V +++ +L+ ++K L+ +RF DGALRL+
Sbjct: 290 SMIENP----TEKIPEEELPPISPEHSVEEVHQAVLNLHSIAKQLRRQRFVDGALRLDQL 345
Query: 697 KPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPN 755
K F D E G P + D N L EEFMLLAN A I R FP+ ALLRRHP P
Sbjct: 346 KLAFTLDHETGLPQGCHIYEYRDSNKLVEEFMLLANMAVAHKIFRTFPEQALLRRHPPPQ 405
Query: 756 MRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASY 815
+ L + FC + GL +D SS+G ++SL + K ++L N +RPMQ+A Y
Sbjct: 406 TKMLSDLVEFCDQMGLPMDVSSAGALNKSLTKTFGDDKYSLARKEVLTNMYSRPMQMALY 465
Query: 816 FCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
FCSG +D + HYAL P+YTHFTSP+RR+ D++VHR L AAL
Sbjct: 466 FCSGMLQDQEQFRHYALNVPLYTHFTSPIRRFADVIVHRLLAAAL 510
>gi|26325590|dbj|BAC26549.1| unnamed protein product [Mus musculus]
Length = 684
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/465 (44%), Positives = 282/465 (60%), Gaps = 10/465 (2%)
Query: 398 REYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAH 457
++Y +P+ + P++ V +KD P R ++ T L RI +W E+ F
Sbjct: 125 KKYALFSPSDHRVPRIYVPLKDCPQDFMTRPKDFANT----LFICRIIDWKEDCNFALGQ 180
Query: 458 VLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEELLSRKDLRNFC 516
+ G+ GE+EP+ IL E + S FS E L CLP +PW +P +E+ R+DLR C
Sbjct: 181 LAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLECLPQSLPWTIPPDEVGKRRDLRKDC 240
Query: 517 IFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQ 576
IFTIDPSTA DLDDAL+ RL+DG VGVHIADVSYFV G++LD A R+TSVY++Q
Sbjct: 241 IFTIDPSTARDLDDALACRRLTDGTFEVGVHIADVSYFVPEGSSLDKVAAERATSVYLVQ 300
Query: 577 RKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQ 636
+ +PMLP LL EE+ SLNP D+L FS+ W L G +++ W GRT+IRSC KLSY+HAQ
Sbjct: 301 KVVPMLPRLLCEELCSLNPMTDKLTFSVIWKLTPEGKILEEWFGRTIIRSCTKLSYDHAQ 360
Query: 637 DIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENS 696
+I+ + E P + + +V +++ +L+ ++K L+ +RF DGALRL+
Sbjct: 361 SMIENP----TEKIPEEELPPISPEHSVEEVHQAVLNLHSIAKQLRRQRFVDGALRLDQL 416
Query: 697 KPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPN 755
K F D E G P + D N L EEFMLLAN A I R FP+ ALLRRHP P
Sbjct: 417 KLAFTLDHETGLPQGCHIYEYRDSNKLVEEFMLLANMAVAHKIFRTFPEQALLRRHPPPQ 476
Query: 756 MRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASY 815
+ L + FC + GL +D SS+G ++SL + K ++L N +RPMQ+A Y
Sbjct: 477 TKMLSDLVEFCDQMGLPMDVSSAGALNKSLTKTFGDDKYSLARKEVLTNMYSRPMQMALY 536
Query: 816 FCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
FCSG +D + HYAL P+YTHFTSP+RR+ D++VHR L A L
Sbjct: 537 FCSGMLQDQEQFRHYALNVPLYTHFTSPIRRFADVIVHRLLAAGL 581
>gi|291239348|ref|XP_002739585.1| PREDICTED: CG16940-like [Saccoglossus kowalevskii]
Length = 1031
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 252/727 (34%), Positives = 378/727 (51%), Gaps = 70/727 (9%)
Query: 143 TNKDDNPSHQSEARCKI---FAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEG 199
++K N H+S K+ F P+ S V+ L+KG+ + R+N N +AY
Sbjct: 224 SSKHRNRHHRSSTPRKLTKPFEPYMSTPEVSAGLKKGELIQGSLRINPRNFEDAYIDNPE 283
Query: 200 VQTDVLITGIAAQNRAVEGDFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSD 259
+ D+ + GI A+NRA+ GD V +++ S W + +N +DS
Sbjct: 284 NKADIYLHGIHARNRALTGDIVAVQLLAKSEWKVKQKEYDNYLTTQDS------------ 331
Query: 260 ICKGKSKVDVSYEYSNCTLLSEKGIHHDDDSSS--EAYNQEMIEREGYNYINGHHPSTSD 317
VS + S TL S D S S ++ N + E++ + S D
Sbjct: 332 ---------VSTDMSKLTLNSNNTAISADMSKSTMDSKNMAVDEKDAVGNLEPVVRSLFD 382
Query: 318 STEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFN 377
+ ++QQ + + + + + + K T +VV IIE+ R
Sbjct: 383 N-----AAQQTEKPKDVLKPADIPDKFLQK--TAKVVFIIEKKHSRA------------- 422
Query: 378 YKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEM 437
A N +L D + P + P++ V + PD +R GD
Sbjct: 423 --------ATGNLKTLPEKDTQDALFCPIDHRLPRIKVPLAQCPDGFIQR--PGD--FSN 470
Query: 438 ELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV 497
L ARI +W E+S F +V G G++EP+ L EN + S FS + + +
Sbjct: 471 VLFVARITDWPEDSGFATGYVARSLGEAGQIEPETEGFLIENGVDFSEFSDQVCFHINFI 530
Query: 498 PWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLP 557
+ + + EL R+DLR CIFTIDP+TA DLDDAL + L DG +GVHIADVSYF+
Sbjct: 531 -FGIEEXEL--RRDLRQECIFTIDPATARDLDDALHCKPLGDGNYEIGVHIADVSYFLQE 587
Query: 558 GTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR 617
GT LD A R+TSVY++Q+ IPMLP LL E++ SLNP DRL FS+ W ++ G ++D
Sbjct: 588 GTELDSVASFRATSVYLVQKVIPMLPRLLCEQLCSLNPAEDRLTFSVIWKISEEGKILDE 647
Query: 618 WIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEV 677
WIGR+VI SC K++Y+HAQ II+ + +++ L P + ++ SD+V+ + +L++V
Sbjct: 648 WIGRSVISSCVKMTYQHAQGIIEEPDRIWNTDEL----PDIIPRYNISDIVQGVLNLHKV 703
Query: 678 SKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 736
+ L+ +RF DGALRL+ K F + E G P + ++D N L EEFMLLAN A
Sbjct: 704 AMNLRKQRFDDGALRLDQPKLAFTINRESGLPNGCSVYEQKDSNRLVEEFMLLANMAVAH 763
Query: 737 VIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDY 796
I ++FP +LLRRHP P + + + C + GL ++ +++G SL+ + DDY
Sbjct: 764 RIYKSFPTKSLLRRHPPPKSKMIDDVVVTCKRMGLHINAATAGDLQSSLK--KYYADDDY 821
Query: 797 --VLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 854
IL+ ++PMQ+A YFC+G D+ D+ HYAL P YTHFTSP+RRY D+VVHR
Sbjct: 822 SKSRSQILVQLCSKPMQMAKYFCTGFIADENDYRHYALNVPFYTHFTSPIRRYADVVVHR 881
Query: 855 TLNAALE 861
L L+
Sbjct: 882 LLAQCLD 888
>gi|431917878|gb|ELK17107.1| DIS3-like exonuclease 2 [Pteropus alecto]
Length = 851
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 255/698 (36%), Positives = 356/698 (51%), Gaps = 114/698 (16%)
Query: 287 DDDSSSEAYNQEMIEREGYNYING--HHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSY 344
D DS N + + +G ++G H D+ +S D ++ + + +
Sbjct: 119 DSDSEDGHGNTQSVLVDGVKKLSGWVHEKGKEDA----GASGTKDESTSVAQDTRALPEK 174
Query: 345 PTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLT 404
+R + +VV I+E+ R GFL + A KN ++Y +
Sbjct: 175 SLQR-SAKVVYIVEKKHSR-AAAGFLKLL------------ADKNSELF----KKYALFS 216
Query: 405 PTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEES---------PFPQ 455
P+ + P++ V +KD P R ++ T L RI +W E+S PF
Sbjct: 217 PSDHRVPRIYVPLKDCPQDFVTRPKDYADT----LFICRIVDWKEDSNFALGCFQPPFFS 272
Query: 456 AHV-LHVF--------------GRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPW 499
H+ + +F G+ GE+EP+ IL E + S FS E L CLP +PW
Sbjct: 273 VHINMKLFTLKLQDLSHLAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLECLPQGLPW 332
Query: 500 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGIS-RVGVHIADVSYFVLPG 558
+P EEL R+DLR C+FTIDPSTA DLDDALS + L+DG + VGVHIADVSYFV
Sbjct: 333 TIPPEELSKRRDLRKDCVFTIDPSTARDLDDALSCKPLADGNAYEVGVHIADVSYFVPEE 392
Query: 559 TALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW 618
+ LD A R+TSVY++Q+ +PMLP L EE+ SLNP D+L FS+ W L G ++D W
Sbjct: 393 SDLDKVAAERATSVYLVQKVVPMLPRPLCEELCSLNPMTDKLTFSVIWTLTPEGKILDEW 452
Query: 619 IGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVS 678
GRTVI SC KLSYEHAQ +I+ + + LG P + + +V R++ SL+ ++
Sbjct: 453 FGRTVICSCTKLSYEHAQSMIESP----TESILGTELPPMSPEHTREEVHRAVLSLHRIA 508
Query: 679 KILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEV 737
K L+ +RF+DGALRL+ K F D E G P + D N L EEFMLLAN A
Sbjct: 509 KELRKQRFSDGALRLDQLKLAFTLDHETGLPQGCHIYEYRDSNKLVEEFMLLANMAVAHK 568
Query: 738 IARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYV 797
I RAFP+ ALLRRHP P + L + E FC + GL +D SS+G ++SL + K
Sbjct: 569 IFRAFPERALLRRHPPPQTKMLSDLEEFCDQMGLPMDFSSAGALNKSLTKLFGNDKYSLA 628
Query: 798 LFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLN 857
++L N +RPMQ YFCSG +D + HYAL P+YTHFTSP+RR+ D++VHR L
Sbjct: 629 RKEVLTNMCSRPMQ---YFCSGALQDQEQFRHYALNVPLYTHFTSPIRRFADIMVHRLLA 685
Query: 858 AALEAEKLYWKHRRMLPKNNHRE--GVRGRFLTGIFYDKDAAESLEGREALSVAALKYGV 915
AAL +RE GV
Sbjct: 686 AAL----------------GYREPPGVE-------------------------------- 697
Query: 916 PCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKK 953
D L A HCNDR++A + V++ L+ +L+K+
Sbjct: 698 --PDALQKQADHCNDRRMASKRVQELSTSLFFAVLVKE 733
>gi|405963531|gb|EKC29095.1| DIS3-like exonuclease 2 [Crassostrea gigas]
Length = 1174
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 243/711 (34%), Positives = 365/711 (51%), Gaps = 70/711 (9%)
Query: 160 FAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEGD 219
F P+WS E V+ L++G+ + +R+N N E + DVLI G +NRA GD
Sbjct: 373 FEPYWSKEEVSAGLKRGELLQGQFRINVKNYEECFIDHPDGTRDVLIHGTKDRNRAFHGD 432
Query: 220 FVLIKV-DRLSLWAKMKGFSNNSSIVEDSNLPTE-ANGMHS-DICKGKSKVDVSYEYSNC 276
V +++ D++ K ++ N E +N M S D+ G + N
Sbjct: 433 IVAVQLKDKMEWRVHEKHLTDLDEEHRQKNGEEEVSNSMKSGDVATGAT--------GNS 484
Query: 277 TLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIER 336
T ++ G D ++ ++ Y + G + S + + S++ D +
Sbjct: 485 TNVNNDGRKSDSKMNTP--------KKKYLSVQGALTNNSPVVKSLFHSEEKDDDLENKL 536
Query: 337 LSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVP 396
L +PT RVV+IIE+ R G + + ++
Sbjct: 537 L----------QPTARVVAIIEKRNNR-ACTGNIML--------------------MTDK 565
Query: 397 DREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEE-SPFPQ 455
R++ P + P+M V + + P +R ++ T L RI +W + F
Sbjct: 566 SRDWAFFRPIDSRMPRMRVPMSECPKDFYERPDDHKNT----LFICRIVDWKDNMQAF-- 619
Query: 456 AHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC--VPWEVPQEELLSRKDLR 513
++ G GE+EP+ +L EN + S F E++ LP +PW +P EE R+D R
Sbjct: 620 GSLMKSLGEAGEIEPETEGMLIENDVDFSEFPQEAIDSLPVQQLPWRIPAEEYEYRRDFR 679
Query: 514 NFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVY 573
+ C+FTIDPSTA DLDDALS E+L DG VGVHIADVSYF+ GT LD A R+TSVY
Sbjct: 680 SQCVFTIDPSTARDLDDALSCEQLPDGNFEVGVHIADVSYFLKEGTILDKIAGHRATSVY 739
Query: 574 MLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYE 633
++Q+ IPMLP +L E++ SLNP DRL FS+ W ++ G++ + W GR+VI+SCCKL+YE
Sbjct: 740 LVQKVIPMLPRILCEQLCSLNPDEDRLTFSVVWKMSEKGEIYEEWFGRSVIKSCCKLAYE 799
Query: 634 HAQDII---DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGA 690
HAQ I D ++ +E P + +F + +L+++++ L+ R GA
Sbjct: 800 HAQGFIEQPDKEWAIEE-------LPPISEKFSVQQIKERTLNLHKIAQNLRKNRAESGA 852
Query: 691 LRLENSKPVF-LFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLR 749
LRL+ K F L DE G P + ++D N L EEFMLLAN A + FP ALLR
Sbjct: 853 LRLDQVKLQFCLNDETGLPNGYSIYQQKDSNRLVEEFMLLANMAVAHKTHKTFPQKALLR 912
Query: 750 RHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRP 809
RHP P + + + C G+ +D +SS +SL + +L++ ++P
Sbjct: 913 RHPPPKSKMMEDLRDLCKCLGVPIDITSSQTLQRSLWSYLGNDEFSAARMQVLVSMCSKP 972
Query: 810 MQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
MQ A YFC+G +D+ + HYAL P+YTHFTSP+RRY D++VHRTL+A L
Sbjct: 973 MQNALYFCTGCLEDEELYRHYALNVPLYTHFTSPIRRYADVLVHRTLSAVL 1023
>gi|281209704|gb|EFA83872.1| Hypothetical ribonuclease II domain containing protein
[Polysphondylium pallidum PN500]
Length = 1265
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 218/577 (37%), Positives = 313/577 (54%), Gaps = 61/577 (10%)
Query: 400 YIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVL 459
+ TP P+ ++ + +P+ + LV+ W + S P
Sbjct: 643 FANFTPMDGCLPRCLIFKESIPE-----FRSNPDKYKTSLVSVNYTAWKDSSILPIGSFH 697
Query: 460 HVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVP----WEVPQEELLSRKDLRNF 515
+FG GE+EP+ A+L E + + FS E + CLP + W + ++L R+DLRN
Sbjct: 698 SLFGECGEIEPETRALLKEYGVDTNAFSREVMDCLPKIQNASQWHITPQDLAQRRDLRNE 757
Query: 516 CIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYML 575
I +IDP TA DLDDALS RL DG +VGVHIADVS+FV PGTALD+ AQ R+T+VY++
Sbjct: 758 VIVSIDPDTAKDLDDALSCVRLPDGNFQVGVHIADVSHFVKPGTALDLSAQQRATTVYLV 817
Query: 576 QRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHA 635
Q+ IPMLP LLSEE+ SLN GV+R AFS+ W L+ G V+ W GR+VI+S C+L+Y A
Sbjct: 818 QKAIPMLPSLLSEELCSLNYGVERFAFSVIWTLSPEGKVLGEWFGRSVIKSACRLTYGIA 877
Query: 636 QDIIDGKFDV---------ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRF 686
Q IIDGK + + LG P+ VV S+ +L E++K L+ R
Sbjct: 878 QTIIDGKINTSWKDGLLPAQIKPILGPDTPE-----HVQTVVESVMNLREIAKRLRQSRM 932
Query: 687 TDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSA 746
+GA + +K F D G P + + + N L EEFMLLAN A IA+ FP +A
Sbjct: 933 DNGAFNIHPTKLAFELDPKGNPISTKIYPIYESNHLVEEFMLLANMQVATRIAKYFPANA 992
Query: 747 LLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYA 806
LLRRHP PN RKL +F FC++HG ++D S F S++ RE+LKD +F + +
Sbjct: 993 LLRRHPNPNPRKLEQFIQFCNQHGWEVDPSDVSSFGSSVKALREQLKDSPNVFAAIQIMS 1052
Query: 807 TRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
R M+LA YFC+G ++D W HYAL YTHFTSP+RRY D++VHR L +++ E+
Sbjct: 1053 IRSMRLAEYFCTGSEEEDL-WHHYALNVDHYTHFTSPIRRYADIIVHRLLELSIQVER-- 1109
Query: 867 WKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVAT 926
AE+ E VA GVP + + +
Sbjct: 1110 ------------------------------AEAA-NIENFQVA----GVPSTEQVAIITK 1134
Query: 927 HCNDRKLACRNVKDACVKLYMWILLKKKEVLFSCLIL 963
+CN++KL R ++ K+++ +LL+ + ++L
Sbjct: 1135 NCNEKKLNSRKAQERSDKVFLCVLLQNSLTITDAVVL 1171
Score = 45.8 bits (107), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 7/115 (6%)
Query: 146 DDNPSHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVL 205
DD + +AR F H ++E V + L F RVN +AY ++GV D+
Sbjct: 351 DDQQKRKRKAR---FPAHVTIEEVEKGLSTSKYFYGQLRVNPKKYNDAYVTVDGVDNDLF 407
Query: 206 ITGIAAQNRAVEGDFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDI 260
G+ +NRA D V+ ++ W K S+ ED++ + G H DI
Sbjct: 408 CDGLKFRNRAFHTDIVVFEILPDEQW---KNRSSGKDEEEDTSARNKV-GQHHDI 458
>gi|443698487|gb|ELT98463.1| hypothetical protein CAPTEDRAFT_225282 [Capitella teleta]
Length = 946
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 250/708 (35%), Positives = 361/708 (50%), Gaps = 83/708 (11%)
Query: 160 FAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEGD 219
F +WS E + + L++G + R+N N +AY +DV I G+ +NRA D
Sbjct: 170 FEDYWSKELIQQGLKRGTLIEGSMRINPKNYEQAYVPHPDGHSDVFICGVQHRNRAFNTD 229
Query: 220 FVLIKVDRLSLWAKM-KGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCTL 278
V+++V ++ W M S E + P + K KS VS E
Sbjct: 230 VVVVEVFPVAAWKVMIDELMPASGAAESAKSPAKQ-------VKNKSCNYVSVE------ 276
Query: 279 LSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLS 338
D ++S+ Y +++ + + HP+ Q +N++ R
Sbjct: 277 ---------DIAASDLYPEDLKQEVRQLLASDSHPA------------QLATLNSVLR-- 313
Query: 339 AMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDR 398
TG+VV I R GFL K + S+++
Sbjct: 314 -----------TGKVVYISLMKHSR-ASAGFL-------------KPFQDKNPSVAL--- 345
Query: 399 EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHV 458
PT + P++ + ++ P ++R + T L A I W S + +
Sbjct: 346 ----FCPTDHRIPRIKIPIESCPADFRQRPDIYAKT----LFIASITNWEPRSTYAMGQL 397
Query: 459 LHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEELLSRKDLRNFCI 517
G G +EP+ A+L + ++ + FS + ++CLP +PW +P EE +RKDLRN C+
Sbjct: 398 QRSLGEAGMIEPETEAMLTQYSVDETEFSADVINCLPQNLPWSIPVEEYSNRKDLRNECV 457
Query: 518 FTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQ- 576
FTIDP+TA DLDDAL L DGI +GVHIADVSYFV GTALD A R+TSVY++Q
Sbjct: 458 FTIDPATARDLDDALHCCHLGDGIYEIGVHIADVSYFVSEGTALDQVASDRATSVYLVQK 517
Query: 577 --RKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEH 634
+ +PMLP LL E++ SLNP DRL FS+ W + G+++D+W GR++IRSC KLSY+H
Sbjct: 518 LSKVVPMLPRLLCEKLCSLNPDEDRLTFSVIWRITEEGEILDQWFGRSIIRSCVKLSYDH 577
Query: 635 AQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLE 694
AQ I+ N E P + F + + +L +V+ L+ +RF GALRL+
Sbjct: 578 AQGFIENP----EQNWEAEQLPPVSEGFCVEQIKERVLNLNKVAVNLRKQRFDAGALRLD 633
Query: 695 NSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPA 753
K F D E G P + ++D N L EEFMLLAN + A I FPD ++LRRHP
Sbjct: 634 KVKLQFSLDKESGLPNGFSVYQQKDSNRLVEEFMLLANMSVAHKIHENFPDQSVLRRHPP 693
Query: 754 PNMRKLREFEAFCSKHGLQLDTSSSGQFHQSL-EQAREKLKDDYVLFDILINYATRPMQL 812
P +R L E + C G+ +DT+SS QS+ QA ++ +L + RPMQL
Sbjct: 694 PQLRMLDELSSICKSLGIPIDTTSSLTMQQSIAAQAENSEQEAKSRMLVLTSMCARPMQL 753
Query: 813 ASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
A YFCSG +D+ + HYAL P YTHFTSP+RRYPD++VHR L A+L
Sbjct: 754 ALYFCSGTVEDEDLYQHYALNVPFYTHFTSPIRRYPDIMVHRQLAASL 801
>gi|307105455|gb|EFN53704.1| hypothetical protein CHLNCDRAFT_136531 [Chlorella variabilis]
Length = 1211
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 229/648 (35%), Positives = 336/648 (51%), Gaps = 120/648 (18%)
Query: 333 AIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSS 392
A+E ++ + R TG VV+++E S RR+ +VG + +++ +K+ +
Sbjct: 513 ALEFIAGQLRQMEGWRVTGEVVAVLEPSRRRESVVGVM------------KQEGEKDTGT 560
Query: 393 LSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEME---LVAARIDEWNE 449
L P P+ P+M+V LP IK+ L+ + + LV+AR+ W+
Sbjct: 561 FF--------LFPCDPRLPRMMVRSATLPPQIKQMLKTEAQALALSARTLVSARLAAWDP 612
Query: 450 ESPFP--QAHVLHVFGRGGEVEPQINAIL-YENAICCSGFSPESLSCLPCVPWEVPQEEL 506
PFP QA V G+ G++ + A+L E F+PE L+CLP PW + +EE+
Sbjct: 613 GFPFPLAQARVRASLGQAGDLASETAALLSMEQVQDDDQFTPEVLACLPPTPWSISEEEV 672
Query: 507 LSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQ 566
+R+DLR +F+IDP TA DLDDALS
Sbjct: 673 AARRDLRRHRVFSIDPPTARDLDDALS--------------------------------- 699
Query: 567 VRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRS 626
VY++ R IPMLP LL EE+ LNPGVDRLAFS+ WDL+ GD++ W GRTVIRS
Sbjct: 700 -----VYLVDRVIPMLPRLLCEEL--LNPGVDRLAFSVVWDLSPEGDILSTWAGRTVIRS 752
Query: 627 CCKLSYEHAQDIIDGKF-DVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKR 685
C KL+Y H Q +I+G+F +E E L G W DVV+ +L+ ++ L+ +R
Sbjct: 753 CGKLAYPHVQSMIEGQFLALEGQEPPCE----LAGGHSWPDVVKDSLTLHRIASRLRKRR 808
Query: 686 FTDGALRLENSKPVFLFDEYGTPYD--------SVLSGREDLNFLFEEFMLLANKTAAEV 737
F GALRL+N++ F D G P D + L RE N L EEFMLLAN T A +
Sbjct: 809 FDSGALRLDNTRLYFKLDGEGNPQDYGVYEQAGTCLVARE-ANQLVEEFMLLANMTTARM 867
Query: 738 IARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYV 797
+A AFPD +LLR HP PN K+ E ++ G LDTS +G QSL RE D
Sbjct: 868 VAEAFPDRSLLRCHPPPNTHKMAELSGTAAELGFHLDTSGAGSLQQSLSALRESAATDPA 927
Query: 798 LFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLN 857
+++ AT+PMQ A YFC+G+ D++ W H+ALA YTHFTSP+RRYPD++VHR +
Sbjct: 928 ALEVITLLATKPMQNARYFCTGETPDESFWRHFALAVTHYTHFTSPIRRYPDIIVHRLMA 987
Query: 858 AALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPC 917
A L+ + K +RM H G++ ++
Sbjct: 988 ALLDRQGS--KEQRM---ARH----------GLYPTREVGA------------------- 1013
Query: 918 ADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLFSCLILYL 965
+A H NDRK+A ++V+D ++LY+ ++L ++ ++ +++ L
Sbjct: 1014 ------IAAHANDRKMAAKSVQDGSLRLYLCVMLYRQPLVCDAVVMQL 1055
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R +A H + + L+ G F+A +R N +R + YC + G+ TDV I G+ QNRA
Sbjct: 156 RSTYYADHLPSSLLQQGLKSGSLFRATFRCNPSDRTQGYCSLPGIPTDVFIRGLKLQNRA 215
Query: 216 VEGDFVLIKVDRLSLWAKM 234
VEGD V I++ S W ++
Sbjct: 216 VEGDEVAIRILPPSEWYQL 234
>gi|384246626|gb|EIE20115.1| RNB-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 493
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 217/481 (45%), Positives = 287/481 (59%), Gaps = 43/481 (8%)
Query: 486 FSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGIS-RV 544
FS ++CLP PW + +E++ R+DLR+ I +IDP TA DLDDALSIE L G RV
Sbjct: 9 FSDAVMACLPATPWSISNDEIMRRRDLRSTRICSIDPLTARDLDDALSIEPLPAGGGWRV 68
Query: 545 GVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSI 604
GVHIADV++FV G+ALD EAQ R TSVYM+ R IPMLP LL EE+ SLNPGVDRL FS+
Sbjct: 69 GVHIADVAHFVAAGSALDKEAQERGTSVYMVDRVIPMLPRLLCEELCSLNPGVDRLTFSV 128
Query: 605 FWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEW 664
WDL+ G V+ +W GRTVIR+C KL+YEHAQ +I+G FD L W
Sbjct: 129 IWDLSDDGRVLSQWAGRTVIRTCAKLAYEHAQAMIEGTFDTAKPPV------ALSRPHTW 182
Query: 665 SDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFE 724
VV + +L+ ++ + +RF +GALRL+N K F D G P D+ + + N L E
Sbjct: 183 PQVVGDVLALHRIAAARRRERFENGALRLDNVKFNFTLDADGNPCDAQPHVQREANQLVE 242
Query: 725 EFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQS 784
EFMLLAN + A +IA AFPD ALLRRHP P+ RK+ E A + GL ++
Sbjct: 243 EFMLLANMSIAALIAGAFPDRALLRRHPPPHQRKMEELAA--TAAGLDVNVDVGSAASLQ 300
Query: 785 LEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPL 844
A + D + DI+ AT+PMQLA YFC+G+ +D DW HYALA P YTHFTSP+
Sbjct: 301 ASLAALRGHPDPRMLDIVQLLATKPMQLARYFCTGEVEDPADWAHYALALPEYTHFTSPI 360
Query: 845 RRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGRE 904
RRYPD++VHR L AAL+ + + LP ++G+
Sbjct: 361 RRYPDILVHRLLAAALKLGESVMT-QTYLPDWCEQQGL---------------------- 397
Query: 905 ALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLFSCLILY 964
L+ A CAD VA HCNDRK A + V++A +LY+ +LL+++ VL +++
Sbjct: 398 -LATKA------CAD----VAAHCNDRKQAAKMVQEASSRLYLAVLLRRRPVLCEGVVMG 446
Query: 965 L 965
L
Sbjct: 447 L 447
>gi|145353210|ref|XP_001420914.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581150|gb|ABO99207.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 538
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 224/569 (39%), Positives = 308/569 (54%), Gaps = 47/569 (8%)
Query: 404 TPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG 463
P PK PK V +P S++K L G +E VA R+ +W++ P ++ V G
Sbjct: 1 VPLDPKLPKGRVSEFSVPKSLQKTLASGAEDVEDVFVAVRLRKWSKGMSMPMMDIIEVVG 60
Query: 464 RGG---EVEPQINAILYENAICCSGFSPESLSCLPCVP----WEVPQEELLSRKDLRNFC 516
+G +++ I+ E+ I FS ++ +CLP V W++P EE+ R + R
Sbjct: 61 KGSMGDDLDFMTKVIVAEHGIESGDFSADATACLPKVKVGDHWKIPPEEMKRRVNFREKL 120
Query: 517 IFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQ 576
+F+IDP TA DLDDALS++ L DG VGVHIADVS+FV P T LD EA+ R T+ Y++
Sbjct: 121 VFSIDPPTARDLDDALSVQVLPDGCLNVGVHIADVSHFVKPDTPLDAEARERGTTTYLVH 180
Query: 577 RKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQ 636
PMLP LL E + SLNPGV+RL FS+ W + G V + R VI+S KLSY H Q
Sbjct: 181 TIFPMLPRLLCENLCSLNPGVERLTFSVEWKMTRGGVVKNVSFKRGVIKSAAKLSYIHVQ 240
Query: 637 DIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENS 696
++ID DV + + + G + DV+ SI L +K ++ KRF GA+RL+
Sbjct: 241 NVIDAGSDVNKAKEALDDV-KFSGAYTAEDVIESISILNAAAKAMRKKRFEAGAVRLDQP 299
Query: 697 KPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNM 756
K F ++ P + D N L EE+MLLAN AE IA FP A+LR HP PN
Sbjct: 300 KVGFELNDDYEPVGAAPYVIRDSNRLVEEYMLLANMYVAEFIAEIFPSHAMLRCHPPPNE 359
Query: 757 RKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYF 816
RKL E F S+H + +D SSS + H SL R +D LFDI+ AT+PMQLA YF
Sbjct: 360 RKLMELSTFASEHDIDIDISSSKRLHDSL---RAIARDSQDLFDIVQLLATKPMQLAKYF 416
Query: 817 CSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKN 876
C+G D+ W HYALA P YTHFTSP+RRYPD++VHR L AALE H K+
Sbjct: 417 CTGSV-DEEQWRHYALAVPYYTHFTSPIRRYPDIIVHRLLAAALE-------HAERQGKS 468
Query: 877 NHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACR 936
+ R+ V K+ + +I +VA HCN+RKLA +
Sbjct: 469 SERDVVE----------------------------KHSLMTPEICSDVADHCNERKLAAK 500
Query: 937 NVKDACVKLYMWILLKKKEVLFSCLILYL 965
++ L++ L+K V+ ++ L
Sbjct: 501 YAQERSQHLFLCKYLQKNPVIARAIVRQL 529
>gi|167519669|ref|XP_001744174.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777260|gb|EDQ90877.1| predicted protein [Monosiga brevicollis MX1]
Length = 583
Score = 374 bits (961), Expect = e-100, Method: Compositional matrix adjust.
Identities = 219/531 (41%), Positives = 303/531 (57%), Gaps = 42/531 (7%)
Query: 348 RPTGRVVSIIERSPRRDGI-VGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 406
+P GRVV+II+ P + + GFL R+D D++++ +P
Sbjct: 20 QPVGRVVAIIKAPPPEERLFAGFLK-----------RRDQ----------DQDFLLFSPK 58
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 466
+ P+M V +PD + ++ LV +EW +S F + V G+ G
Sbjct: 59 DSRVPRMRVPAHSVPDEVDDKM----------LVIVSFEEWTAKSRFARGSFKRVLGQAG 108
Query: 467 EVEPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLRNFCIFTIDP 522
++ + AIL E I F P L CLP V P+ +P +E+ R+DLR+ IFTIDP
Sbjct: 109 TIDAETQAILMEYKIPFEDFKPHVLKCLPKVDEKHPFVIPDDEIAKRRDLRDVRIFTIDP 168
Query: 523 STATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPML 582
STA DLDDAL +L DG +GVHIADVSYFV P T LD EA+ R+TS Y++Q PML
Sbjct: 169 STARDLDDALHCTQLPDGNFEMGVHIADVSYFVEPNTPLDEEAEFRATSTYLVQSVYPML 228
Query: 583 PVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
P LL E + SLNP DRLAFS+ W L+ G+ W GRTVIRS CKL+Y+HAQ ID
Sbjct: 229 PRLLCEGLCSLNPDEDRLAFSVIWVLDPEGNRKSTWFGRTVIRSRCKLAYDHAQLFIDD- 287
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
ES +P+L + +DV + + +++ ++D+RF +GALRL +K F
Sbjct: 288 ---ESKEWNDVEFPRLSADTQGADVKADVLRMNHIAQQMRDRRFANGALRLNKTKLSFRL 344
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
E P ++ + N L EEFMLLAN + AE IA+AFP ALLRRHP P +L E
Sbjct: 345 GEDMLPVETWPYVQRAANQLVEEFMLLANISVAECIAKAFPQCALLRRHPEPFTSRLEEV 404
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
A + G+ LDT SSG S+ +E +D + +++ T MQ A YF +GD K
Sbjct: 405 AARFQRVGIPLDTGSSGDIAASIRAYQENEQDQGRV-EVMQLLLTMAMQQAVYFSTGDSK 463
Query: 823 -DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRM 872
+ +DW HYALA P+YTHFTSP+RRY D+VVHR L AALE ++ +++H ++
Sbjct: 464 LEQSDWKHYALATPMYTHFTSPIRRYADVVVHRLLLAALENKETFYEHDKV 514
>gi|328772514|gb|EGF82552.1| hypothetical protein BATDEDRAFT_86346 [Batrachochytrium
dendrobatidis JAM81]
Length = 1062
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 232/615 (37%), Positives = 321/615 (52%), Gaps = 75/615 (12%)
Query: 340 MISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDRE 399
++ + R G+VV II VG L++++ + KNRSS
Sbjct: 345 VVQEHVESRIYGKVVGIISCKTANRIFVGTLHLDRPLS----KSPSIDKNRSS------R 394
Query: 400 YIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVL 459
+I P+ P M++ + P K+ L + ++ + LV A + W+ P A
Sbjct: 395 WIWFMPSDKSIPFMIISKELAP---KEFLADPESFANI-LVTATLKSWSTTDALPHADYN 450
Query: 460 HVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFT 519
+ G+ GE+ + A+L + FS L CLP +PW +P+EE+ R DLR IF+
Sbjct: 451 GLLGQMGELHVESKALLQAAGVVWDDFSDSVLDCLPSLPWSIPEEEIAKRWDLRKTRIFS 510
Query: 520 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 579
IDP TA DLDDA+S L DG VGVHIADVSYFV TALD EA R+T+VY++QR I
Sbjct: 511 IDPETAKDLDDAVSCRALPDGRFEVGVHIADVSYFVHQKTALDDEALYRATTVYLVQRAI 570
Query: 580 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR-WIGRTVIRSCCKLSYEHAQDI 638
PMLP LL EE+ SLNP VDRLAFS+FW ++ G ++ + GR+VIRSC KLSYEHAQ +
Sbjct: 571 PMLPRLLCEELCSLNPDVDRLAFSVFWIFDAQGTIIGQPRFGRSVIRSCAKLSYEHAQAV 630
Query: 639 IDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKP 698
IDGK + ++ Q D+ I LY+ SKI++ KR+ DGAL + + K
Sbjct: 631 IDGKPFAKHV--------EISAQVTLEDISTDILQLYKFSKIMRKKRYDDGALSIHSIKL 682
Query: 699 VFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRK 758
F D G P +S + +D N L EE+MLLAN A+ I FP +LLRRHP P
Sbjct: 683 WFSLDHLGNPVESGMYELKDSNRLIEEYMLLANMAVAQKIHEHFPSESLLRRHPIPGCSA 742
Query: 759 LREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCS 818
+ +F ++ G+ +D SSSG +S E + L + + ++ A R M+ A Y+ S
Sbjct: 743 MTKFVEKMARIGIVIDASSSGSLQESFEAIEDPL---HRMITRMV--AIRTMRRAVYYSS 797
Query: 819 GDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNH 878
GD + D+ HYAL P YTHFTSP+RRY DLVVHR LN+ LE
Sbjct: 798 GDPSVE-DFKHYALCVPFYTHFTSPIRRYCDLVVHRLLNSVLEG---------------- 840
Query: 879 REGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNV 938
+LE + A ++++A CNDRK A R
Sbjct: 841 --------------------NLEASSPYTNAT----------IMDIAEQCNDRKDASREA 870
Query: 939 KDACVKLYMWILLKK 953
+ A KL++W LKK
Sbjct: 871 QTASSKLFLWAYLKK 885
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
Query: 141 AYTNKDDNPSHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGV 200
A++ K P+ Q IF + S++ + E +E G F+ + R+N NR + Y I G
Sbjct: 227 AFSKKSKKPAKQ------IFQEYLSLDQIKEGIENGSIFQGVLRINKANRNDGYVTINGS 280
Query: 201 Q-TDVLITGIAAQNRAVEGDFV 221
TDV I G NRA D V
Sbjct: 281 SDTDVYIPGATLINRAFSNDVV 302
>gi|19115422|ref|NP_594510.1| ribonuclease II (RNB) family (predicted) [Schizosaccharomyces pombe
972h-]
gi|74581952|sp|O14040.1|DIS3L_SCHPO RecName: Full=Dis3-like exonuclease C2C4.07c
gi|2414618|emb|CAB16367.1| ribonuclease II (RNB) family (predicted) [Schizosaccharomyces
pombe]
Length = 927
Score = 369 bits (947), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 221/553 (39%), Positives = 308/553 (55%), Gaps = 29/553 (5%)
Query: 317 DSTEKVSSSQQND----GMNAIERL--SAMISSYPTKRPTGRVVSIIERSPRRDGIVGFL 370
+ EKV +D M +ERL ++ S R RVV+I E+ IVG L
Sbjct: 255 NGVEKVKIKDHDDELGGAMEHLERLEIKSVASFKGDSRTRARVVAI-EKRAEISKIVGIL 313
Query: 371 NVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEE 430
W + KN +S Y P + P + + DL D + E
Sbjct: 314 RAPGW----------SLKNVEYVS-KKSSYAIFIPKDKRLPFITIHKNDLSDLSGENWIE 362
Query: 431 GDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPES 490
+L + I W+ S +P + G +VE NA+L EN I S FS E
Sbjct: 363 NILKHHDQLFSVEITRWSIYSRYPMGVLGEKLGNITDVEAYTNALLLENGISSSPFSDEV 422
Query: 491 LSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIAD 550
L+CLP W + EE+ R+DLRN I TIDP TA DLDDA+S L +G VGVHIAD
Sbjct: 423 LNCLPPDDWIISHEEIKKRRDLRNELIITIDPETARDLDDAVSCRALDNGTYEVGVHIAD 482
Query: 551 VSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNS 610
V++FV P +ALD EA R+T+VY++Q+ IPMLP LL E + SLNP V+RLAFS+FW L+S
Sbjct: 483 VTHFVKPDSALDKEAASRATTVYLVQKAIPMLPPLLCERLCSLNPNVERLAFSVFWKLDS 542
Query: 611 AG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK-FDVESSNTLGEGWPQLYGQFEWSDVV 668
G ++ RW G+TVI++C +L+Y AQ +I+GK +D +G G DV
Sbjct: 543 NGKEIGKRWFGKTVIKTCARLAYSEAQGVIEGKSWDDAVGKPIG-------GTHTPKDVE 595
Query: 669 RSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFML 728
SI +L E+S+ L+ RF GA+ + +++ F DEYG P + + D N L EEFML
Sbjct: 596 TSILTLCEISRKLRKDRFAKGAVEINSTELKFQLDEYGMPNKCEVYEQTDANHLIEEFML 655
Query: 729 LANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQA 788
LAN++ AE I++ F +++LLRRH +P +++ EF F D SSS F+ S+ +
Sbjct: 656 LANRSVAEHISKNFSNNSLLRRHASPKEKQINEFCHFLKSMNFDFDASSSAAFNASMVRL 715
Query: 789 REKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYP 848
R ++ L ++ N A R + A YFC+GDF + TDW HYAL+F YTHFTSP+RRYP
Sbjct: 716 RSTFNEE--LVELFENMAVRSLNRAEYFCTGDFGEKTDWHHYALSFNHYTHFTSPIRRYP 773
Query: 849 DLVVHRTLNAALE 861
D++VHR L +L+
Sbjct: 774 DIIVHRLLERSLK 786
>gi|213408465|ref|XP_002175003.1| mitotic control protein dis3 [Schizosaccharomyces japonicus yFS275]
gi|212003050|gb|EEB08710.1| mitotic control protein dis3 [Schizosaccharomyces japonicus yFS275]
Length = 859
Score = 368 bits (945), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 216/550 (39%), Positives = 310/550 (56%), Gaps = 25/550 (4%)
Query: 313 PSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNV 372
P++ T + SSS ++D + A+ +S + P +VV+I ER PR D +VG L+
Sbjct: 178 PASESVTVQGSSSSEDD----LTADPALPTSVASSNPNAKVVAIAERWPR-DSVVGILHP 232
Query: 373 NQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGD 432
W + GS +++K N Y P + P ++ DL + E
Sbjct: 233 PGW-SPNTGSPRNSKSN----------YCIFQPQSKRMPFHLIHKNDLGELSGSNWREQI 281
Query: 433 ATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLS 492
E + + + W+ S +P A V G +E AIL E + F E L
Sbjct: 282 TQNEGVIFSVKRKTWSATSRYPLAKVDKRIGHLSNIEASTQAILLERMVNSREFPDEVLD 341
Query: 493 CLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVS 552
CLP W + EE R+ + + TIDP TA DLDDA+S DG R+ VHIADVS
Sbjct: 342 CLPSDNWCITDEERAKRRSFLDQIVLTIDPETARDLDDAVSCIDNGDGTYRISVHIADVS 401
Query: 553 YFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAG 612
+FV P TALD EA+ R+T+VY++QR IPMLP LL E + SLNP V+RLAFS+ W ++ G
Sbjct: 402 HFVKPETALDNEARSRATTVYLVQRAIPMLPTLLCERLCSLNPSVERLAFSVEWLVDRNG 461
Query: 613 -DVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSI 671
++ RW G+++I++CC+L+Y AQ+I++GK S G G P G F+ +DV SI
Sbjct: 462 RELGPRWFGKSLIKTCCRLTYTEAQNILEGK-----SWEEGVGKPISDG-FKATDVEVSI 515
Query: 672 KSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLAN 731
++L ++K L+ RF +GA+ + S+ F DE G P + +D N L EEFML AN
Sbjct: 516 RNLNIIAKALRKARFDNGAVSVNTSELKFRLDEQGLPQKCEVYEHKDANRLIEEFMLFAN 575
Query: 732 KTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREK 791
++ AE I+ FP ALLRRH P ++L EF F + G D S+S +F+ SL++ REK
Sbjct: 576 RSVAEKISNHFPHVALLRRHAPPKEKQLGEFIRFLAHLGFDFDGSTSARFNDSLQRLREK 635
Query: 792 LKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 851
D + +++ N A R +Q A YFC+G ++W HYALAF YTHFTSP+RRYPD++
Sbjct: 636 FPSD--ITELIENMAARSLQRAEYFCTGSTDSVSEWLHYALAFSHYTHFTSPIRRYPDII 693
Query: 852 VHRTLNAALE 861
VHR L A++
Sbjct: 694 VHRLLECAVQ 703
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRV--NAHNRLEAYCKIEGVQTDVLITGIAAQNRAV 216
++ H + EA E L+KG K R+ + H+ A+ +EG D I G+ A+NRA+
Sbjct: 107 VYEEHLTKEAYLEGLKKGTLLKGTLRILDSFHS---AFVTVEGYADDFYIDGMIARNRAL 163
Query: 217 EGDFVLIKV 225
+ D V+I+
Sbjct: 164 DNDTVIIET 172
>gi|194379950|dbj|BAG58327.1| unnamed protein product [Homo sapiens]
Length = 675
Score = 367 bits (943), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 238/664 (35%), Positives = 340/664 (51%), Gaps = 59/664 (8%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
IF + S E V+E L++G + + R+N EA+ D+ I G+ A+NRA+ G
Sbjct: 49 IFETYMSKEDVSEGLKRGTLIQGVLRINPKKFHEAFIPSPDGDRDIFIDGVVARNRALNG 108
Query: 219 DFVLIKVDRLSLWAKMKGFSNN--SSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNC 276
D V++K+ W +K SN+ + +S++P E G H KS D +
Sbjct: 109 DLVVVKLLPEEHWKVVKPESNDKETEAAYESDIPEELCGHHLPQQSLKSYND------SP 162
Query: 277 TLLSEKGIHHDDDSSSEAYNQEMIEREGYNYI----------NGHHPSTSDSTEKVSSSQ 326
++ E D Q ++ +G + +G P T D T +S
Sbjct: 163 DVIVEAQFDGSDSEDGHGITQNVL-VDGVKKLSVCVSEKGREDGDAPVTKDETTCISQDT 221
Query: 327 QNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDA 386
+ +++R + +VV I+E+ R GFL + A
Sbjct: 222 RALSEKSLQR-------------SAKVVYILEKKHSR-AATGFLKLL------------A 255
Query: 387 KKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDE 446
KN R+Y +P+ + P++ V +KD P R ++ T L RI +
Sbjct: 256 DKNSELF----RKYALFSPSDHRVPRIYVPLKDCPQDFVARPKDYANT----LFICRIVD 307
Query: 447 WNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEE 505
W E+ F + G+ GE+EP+ IL E + S FS E L CLP +PW +P EE
Sbjct: 308 WKEDCNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLECLPQGLPWTIPPEE 367
Query: 506 LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEA 565
R+DLR CIFTIDPSTA DLDDALS + L+DG +VGVHIADVSYFV G+ LD A
Sbjct: 368 FSKRRDLRKDCIFTIDPSTARDLDDALSCKPLADGNFKVGVHIADVSYFVPEGSDLDKVA 427
Query: 566 QVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIR 625
R+TSVY++Q+ +PMLP LL EE+ SLNP D+L FS+ W L G ++D W GRT+IR
Sbjct: 428 AERATSVYLVQKVVPMLPRLLCEELCSLNPMSDKLTFSVIWTLTPEGKILDEWFGRTIIR 487
Query: 626 SCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKR 685
SC KLSYEHAQ +I+ + + L P + + +V +++ +L+ ++K L+ +R
Sbjct: 488 SCTKLSYEHAQSMIESPTEKIPAKEL----PPISPEHSSEEVHQAVLNLHGIAKQLRQQR 543
Query: 686 FTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPD 744
F DGALRL+ K F D E G P + + N L EEFMLLAN A I RAFP+
Sbjct: 544 FVDGALRLDQLKLAFTLDHETGLPQGCHIYEYRESNKLVEEFMLLANMAVAHRIHRAFPE 603
Query: 745 SALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN 804
ALLRRHP P R L + FC + GL +D SS+G ++SL Q K ++L N
Sbjct: 604 QALLRRHPPPQTRMLSDLVEFCDQMGLPVDFSSAGALNKSLTQTFGDDKYSLARKEVLTN 663
Query: 805 YATR 808
+R
Sbjct: 664 MCSR 667
>gi|320164952|gb|EFW41851.1| DIS3-like exonuclease 2 [Capsaspora owczarzaki ATCC 30864]
Length = 1350
Score = 366 bits (939), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 266/845 (31%), Positives = 396/845 (46%), Gaps = 129/845 (15%)
Query: 169 VNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEGDFVLIKVDRL 228
V+ L G + L R+N AY + + DV + G+ +NRA++GD V++++D
Sbjct: 346 VDAGLADGTLLQGLIRINPKAHSMAYVTCDKLDRDVCLEGLEKRNRALDGDSVVLRLDDK 405
Query: 229 SLWAKMKGFSNNSSIVE-DSNLPTEANGMHSDICKGKSKVDVSYEYSNCTLLSEKGIHHD 287
+LW M+ + + + D + + + + S + + + +
Sbjct: 406 ALWRIMQRDWDADQLAKGDGKVDSVSAKLGSLSLNDREQHHDDDNDMDDEDDEDDEHDLS 465
Query: 288 DDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQN---------DGMNAIERLS 338
D S+ + + ++ + P+ +T KV+ QQ + R +
Sbjct: 466 SDPSTASSASVLSTASSVSFSSSKEPT---ATTKVNRHQQGRRTKMRSTIQTLGEYRRSA 522
Query: 339 AMISSYPTK--RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKN------R 390
S P K +PTG VV I+E + R +VG L+ F K +++D ++
Sbjct: 523 GNAKSVPDKFLQPTGNVVFILENNRRETPVVGQLSS---FKSKPPTKQDIIRHGGRSAAA 579
Query: 391 SSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEE 450
+ TP P+ P M V + D P+ + ++ + L +A++ +W E
Sbjct: 580 KASQSSTESRALFTPIDPRIPSMRVPLADCPEDLTSVPQK----YKDMLFSAKLTDWPEN 635
Query: 451 SPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVP------------ 498
S + VL + G G++ + AI E+ F P+ L+CLP V
Sbjct: 636 SSYASGKVLELLGPVGQIASETRAIRLEHHFEQERFEPKVLACLPSVAHPHATPTTELPK 695
Query: 499 -----------------------WEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIE 535
W VP+ EL +R+DLR+ IFTIDP TA DLDDAL I
Sbjct: 696 NSKAAQDPVDPEKTLPPGADPTGWVVPEAELQTRRDLRSTRIFTIDPPTARDLDDALHIT 755
Query: 536 RLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNP 595
L+D + VGVHIADVSYFV G+ LD EA R+T+ Y++Q +PMLP LLSE + SLNP
Sbjct: 756 PLADDLFEVGVHIADVSYFVKEGSRLDKEAAERATTCYLVQMVVPMLPGLLSEHLCSLNP 815
Query: 596 GVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE--------- 646
G DRLAFS+ W +NSAG + D+WIGRTVIRSC K++Y+ AQ+I+D E
Sbjct: 816 GTDRLAFSVIWKMNSAGVIQDQWIGRTVIRSCVKMNYDIAQEILDSDVTREWLYDDLPDV 875
Query: 647 ---SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD 703
++N G P L D+ +++L++V + L+ R + GALRL+ K F D
Sbjct: 876 FPLAANPTSAGVPVLPTAM---DIAGDVRNLWKVGQQLRAARASQGALRLDRVKLSFTID 932
Query: 704 -EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
P + N L EEFMLLAN A I AFP+ +LLR H P+ KL E
Sbjct: 933 PNTKEPLSYGAYPIRESNKLVEEFMLLANMCTARRIFDAFPEQSLLRCHAPPHTSKLAEL 992
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
+ G+ +D SS+G QSL A E+ +V+ ++ T PMQ A YFCSG
Sbjct: 993 AKDLRESGIPMDVSSAGALQQSL-LAIEQTHGTHVM-QVVQVLVTHPMQQAKYFCSGQQH 1050
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGV 882
+ W HYAL P YTHFTSP+RRYPD++VHR L+ A +
Sbjct: 1051 REDFW-HYALNVPFYTHFTSPIRRYPDIIVHRLLDQA----------------------I 1087
Query: 883 RGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDAC 942
RG +DAA ++ L G +A+HCN RK RN ++
Sbjct: 1088 RG---------QDAAS--------VISTLPLG--------KIASHCNTRKSDARNAQERS 1122
Query: 943 VKLYM 947
+Y+
Sbjct: 1123 SAVYL 1127
>gi|390369809|ref|XP_794209.3| PREDICTED: DIS3-like exonuclease 2-like, partial
[Strongylocentrotus purpuratus]
Length = 817
Score = 365 bits (937), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 242/699 (34%), Positives = 361/699 (51%), Gaps = 69/699 (9%)
Query: 202 TDVLITGIAAQNRAVEGDFVLIKV-----------DRLSLWAKM----------KGFSNN 240
+D+ I G+ A+NRA++GD V +++ R+S K+ +
Sbjct: 4 SDIFINGVHARNRALQGDVVAVQILTGEVVMTPKSQRMSTPRKLLANQPIIAVSESPDRQ 63
Query: 241 SSIVEDSNLPTEANGMHSDICKGK------SKVDVSYEYSNCTLL-SEKGIHHDDDSSSE 293
S S+ P + G + +G +++DVS S+ L SE D S++
Sbjct: 64 GSSTPGSSTPKKLGGRYFFGSQGDFDTSSLNELDVSDNMSSLYLNNSEAAFGFADVSATS 123
Query: 294 AYNQEMIE---REGYNYINGHHPSTSDSTEKVSSSQQND------GMNAIERLSAMISSY 344
Q+ + R ++ S+S+ E + N+ G +++ + +
Sbjct: 124 GEEQDKVGDLVRREWSDARSEVSSSSEVIEDAPRTPSNNRGSSTSGGGTPQKIGGTLGND 183
Query: 345 PTKRP-TGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQL 403
P P T RVV I E R G L + S+ PD +
Sbjct: 184 PRMAPKTARVVYICEYKHSR-AASGHLKLP-----------------SNPRAPD---VMF 222
Query: 404 TPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG 463
PT + P++ + K+ P + +R ++ T L A+I +W S F + H+L+ G
Sbjct: 223 APTDHRVPRIYIPRKECPATFSQRPQDYANT----LFIAQIIDWPRISAFAKGHLLYSIG 278
Query: 464 RGGEVEPQINAILYENAICCSGFSPESLSCLPC-VPWEVPQEELLSRKDLRNFCIFTIDP 522
+ GEVE + A+L E+ I S F+ E L LP PW +P EEL R+DLR+ CIFTIDP
Sbjct: 279 QAGEVEAETTAMLIEHGIDSSEFTTEVLEDLPKERPWRIPAEELSQRRDLRSECIFTIDP 338
Query: 523 STATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPML 582
+TA DLDDAL + L DGI +GVHIADVSYFV T+LD A R+TSVY++Q+ IPML
Sbjct: 339 TTARDLDDALHCKALGDGIYEMGVHIADVSYFVKEDTSLDKTASHRATSVYLVQKVIPML 398
Query: 583 PVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
P LL EE+ SLNP +RL S W + G+++ W GR+VIRSC KLSY HAQD+I+
Sbjct: 399 PRLLCEELCSLNPDQERLTMSFIWRMTEEGEILQEWCGRSVIRSCVKLSYLHAQDMIENW 458
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVF-L 701
+ L P++ F ++V +++ ++ +++ L+ KRF GALRL+ K + L
Sbjct: 459 EEKGDDIVL----PEITNGFGRNEVAQAVLNMQKIASNLRKKRFDGGALRLDQVKLQYSL 514
Query: 702 FDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLRE 761
E P + ++D N L EEFMLLAN AA I +A P A LRRHP P + + +
Sbjct: 515 NAETTLPNGYSVYQQKDSNRLVEEFMLLANMAAAHRIFKAEPQRAFLRRHPPPKEKMMDD 574
Query: 762 FEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDF 821
C GL +D +++G+ SL + + L +L ++PMQ A YFC
Sbjct: 575 LATLCESLGLDMDGTTAGKLQASLNRYCTSEEQAKCLLKVLTVLYSKPMQKARYFCCASL 634
Query: 822 KDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
+D+ + HYAL P+YTHFTSP+RRYPD++VHR L ++L
Sbjct: 635 EDEEMYRHYALNVPLYTHFTSPIRRYPDILVHRMLASSL 673
>gi|66815805|ref|XP_641919.1| hypothetical protein DDB_G0278757 [Dictyostelium discoideum AX4]
gi|60469999|gb|EAL67980.1| hypothetical protein DDB_G0278757 [Dictyostelium discoideum AX4]
Length = 1343
Score = 364 bits (935), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 207/566 (36%), Positives = 304/566 (53%), Gaps = 67/566 (11%)
Query: 400 YIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVL 459
+ P PK + + +P + + + LV+ W E S P H
Sbjct: 722 FTNFIPMDTTLPKCCIFKESIP-----QYKSNPEKYKKSLVSVGYSGWKETSLLPIGHYK 776
Query: 460 HVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVP----WEVPQEELLSRKDLRNF 515
+FG G++EP+ A+L E + FS E + CLP + W +++L R+DLRN
Sbjct: 777 SLFGECGKIEPETYALLSEFGVETDPFSKEVMECLPKIDQSKLWLPSEQDLKGRRDLRNL 836
Query: 516 CIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYML 575
I TIDP TA DLDDAL L DG VGVHIADVS+FV P TALD AQ ++T+VY++
Sbjct: 837 EICTIDPDTAKDLDDALHCIELEDGNFEVGVHIADVSHFVKPDTALDKCAQRKATTVYLV 896
Query: 576 QRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHA 635
Q+ IPMLP LLSEE+ SLN GV+RLAFS+ W L+ G+++D W GR+VI+S +L+Y A
Sbjct: 897 QKAIPMLPSLLSEELCSLNMGVERLAFSVIWKLSPTGEILDEWFGRSVIKSFSRLTYAIA 956
Query: 636 QDIIDGKFDV---------ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRF 686
Q +ID K + LG Q + V + + L ++K ++ R
Sbjct: 957 QALIDDKITNAWEDWIPADKMRKDLGPNTAQHIAR-----VKKGVLGLRSIAKHMRSNRI 1011
Query: 687 TDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSA 746
+GA + SK F D+ G P + + + N L EE+MLLAN AE I + FP ++
Sbjct: 1012 ANGAFTIHPSKLAFALDDKGNPVSTKIYPIYESNNLVEEYMLLANMRVAERIGKFFPSNS 1071
Query: 747 LLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYA 806
LLRRHP+PN KL F +FCSKHG ++D+SSS F +S+++ ++ D +L I + +
Sbjct: 1072 LLRRHPSPNENKLESFISFCSKHGFEIDSSSSLTFGESIKKLKDTCTDINILMAIQL-LS 1130
Query: 807 TRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
R M+LA YFCS + +++ DW HYAL P YTHFTSP+RRY D++VHR L+ +++ EK
Sbjct: 1131 IRSMKLAEYFCSNN-EEEEDWRHYALNAPFYTHFTSPIRRYADIIVHRLLDLSIQVEKNN 1189
Query: 867 WKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVAT 926
H LP ++ES+ +
Sbjct: 1190 RNHTEQLP---------------------SSESITA---------------------ICK 1207
Query: 927 HCNDRKLACRNVKDACVKLYMWILLK 952
+CN++KL R ++ K+++ +LL+
Sbjct: 1208 NCNEKKLNARKAQERSDKVFLCVLLE 1233
Score = 40.4 bits (93), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Query: 144 NKDDNPSHQSEARCKIFAPHW-SMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQT 202
NK++N + + R ++F + E + + L +G F RVN +AY +EG
Sbjct: 422 NKNNNEGKRKK-RTRLFYKQYVEKEDLEKGLAEGKYFFGTLRVNPKKYHDAYITVEGCSH 480
Query: 203 DVLITGIAAQNRAVEGDFVLIKVDRLSLWAK 233
DV G+ +NR+ D V ++ W K
Sbjct: 481 DVFCDGLKYRNRSFNNDVVAFEILDEKEWKK 511
>gi|440799389|gb|ELR20441.1| RNB family domain containing protein [Acanthamoeba castellanii str.
Neff]
Length = 1400
Score = 364 bits (934), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 201/486 (41%), Positives = 288/486 (59%), Gaps = 31/486 (6%)
Query: 400 YIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVL 459
Y P + P+++V VK L SI E + L ++ W S P+ ++
Sbjct: 493 YAFFVPLEKRMPRILVPVKRLSASIINHPNE----LTTNLFVCKLTGWPASSGHPRGELI 548
Query: 460 HVFGRGGEVEPQINAILYENAICCS-GFSPESLSCLPCVP-----WEVPQEELLSRKDLR 513
G G++E ++ +L +N I F+PE ++CLP +P WE+P EE ++RKDLR
Sbjct: 549 KNMGPSGDMEVELRVLLQDNNIDWEDSFAPEVVACLPRIPPAPARWEIPAEEFITRKDLR 608
Query: 514 NFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVY 573
IFTIDP+TA D+DDA+S +RL DG VGVHIADV+YFV P T LD +A++R+T+VY
Sbjct: 609 KERIFTIDPATAKDMDDAVSCKRLPDGTYLVGVHIADVTYFVKPDTPLDEDAKMRATTVY 668
Query: 574 MLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR-WIGRTVIRSCCKLSY 632
M+ R IPMLP LLS+ + SL PG DRL+FS+ W ++ G+V++ W GRT+IRSC K+SY
Sbjct: 669 MVHRSIPMLPRLLSDNMCSLVPGEDRLSFSVTWKMDKEGNVLEEPWFGRTIIRSCVKMSY 728
Query: 633 EHAQDIIDGKFD----------------VESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 676
E AQ+++D +F V+ + + E ++V +K L
Sbjct: 729 EAAQEMLDDRFSPPSAEPPAPEAAAKPVVKRGSVFAKDLTAPEHTVE--EIVDDVKVLNA 786
Query: 677 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 736
+++ L+ KRF DG+L L+++K F D+ P D + R +FL EEFMLLANK+ A+
Sbjct: 787 MAESLRKKRFEDGSLTLDDAKMYFCLDDDKMPIDVGVYVRTASHFLIEEFMLLANKSVAK 846
Query: 737 VIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDY 796
I A+PD ALLRRHPAPN KL EF + CS + + DTSSS F +SL D
Sbjct: 847 RIHSAYPDRALLRRHPAPNDNKLAEFISMCSANSISFDTSSSKGFQRSLLALSSLPNPD- 905
Query: 797 VLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTL 856
+ ++ A +PM +A Y C+ + + + HYALAF YTHFTSP+RRY D++VHR L
Sbjct: 906 -IAAVVTRLAMKPMSVAKYTCTDEEAGEGAYRHYALAFDHYTHFTSPIRRYADVIVHRLL 964
Query: 857 NAALEA 862
+A L+
Sbjct: 965 DACLQG 970
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 137 SSCWAYTNKDDNPSHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLE-AYC 195
SS + K P Q +R F H S E V + L+ G + + RVN H R+ AY
Sbjct: 159 SSASSTPKKPFQPPRQRRSR---FKEHLSSEEVEQGLKDGTLLQGVLRVN-HKRMRLAYV 214
Query: 196 KIEGVQTDVLITGIAAQNRAVEGDFVLIKVDRLSLW 231
+EG DVLI G+ A+NRA EGD V+I+++ S W
Sbjct: 215 SVEGFDKDVLIDGVFARNRAFEGDVVVIRLNDPSEW 250
>gi|384487354|gb|EIE79534.1| hypothetical protein RO3G_04239 [Rhizopus delemar RA 99-880]
Length = 1168
Score = 359 bits (922), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 209/566 (36%), Positives = 299/566 (52%), Gaps = 71/566 (12%)
Query: 384 KDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAAR 443
KD KN S+ + + P + P M + ++ P I E +A LV R
Sbjct: 512 KDINKNSSTEKKNNIRMVWFKPIDKRVPLMGIPLRLAPPDIV----ENEAKYTNLLVVVR 567
Query: 444 IDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQ 503
I +W +S P + G G + + AIL +N I FS ++L LP PW + Q
Sbjct: 568 IQKWPIDSLTPLGAFVRELGHIGNIPAETEAILSDNGISEIPFSKKALKGLPPTPWSIEQ 627
Query: 504 EELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDI 563
E+ R+DLR+ IFTIDP+TA DLDDA+ + +L + VGVHIADVS+FV TALD
Sbjct: 628 AEINKRRDLRDTRIFTIDPATAKDLDDAVHVTKLDENEFEVGVHIADVSHFVKQHTALDH 687
Query: 564 EAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTV 623
EA R TS Y+ R IPMLP LL EE+ SLNPGVDRLAFS+ W ++ G++ + W G+TV
Sbjct: 688 EAFDRGTSTYLCDRVIPMLPSLLCEELCSLNPGVDRLAFSVIWKMDGVGNIKETWFGKTV 747
Query: 624 IRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLY--GQFEWSDVVRSIKSLYEVSKIL 681
IRSC KLSY+ AQ +I+G G P+ + ++V + I L+ +SK +
Sbjct: 748 IRSCAKLSYDDAQSVIEGN-----------GLPETVTIKDHKSTEVEQDIIYLFNMSKKM 796
Query: 682 KDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARA 741
+++RF++GAL + + + F +E G PY+ + ++D N L EEFML AN + AE I
Sbjct: 797 RERRFSNGALSINSIRLSFKLNELGEPYEVSIYEQKDANRLIEEFMLRANMSVAEKITEH 856
Query: 742 FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDI 801
+P+ ALLR+H P+ + L EF G D+SS+G +S +D + +
Sbjct: 857 YPNEALLRQHSPPHEKSLNEFLKIAENLGYSFDSSSAGSLQESFNAIES--EDAKAVLKL 914
Query: 802 LINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 861
L A +PMQ A YFC+G F + T + HYAL P+YTHFTSP+RR+ D++VHR L AAL
Sbjct: 915 L---AVKPMQRAKYFCTGSF-ETTKFRHYALNVPLYTHFTSPIRRFADIIVHRQLEAALL 970
Query: 862 AEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADIL 921
+K Y K D++
Sbjct: 971 GKKT------------------------CSYKK------------------------DVV 982
Query: 922 VNVATHCNDRKLACRNVKDACVKLYM 947
A+HCN+RK +N +D ++LY+
Sbjct: 983 QKTASHCNERKEGAKNSQDMNLQLYL 1008
Score = 48.5 bits (114), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 184 RVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEGDFVLIK-VDRLSLWAKMK 235
R+N NR++AY + +++D+ I GI +NRA+EGD V ++ VD +W K K
Sbjct: 362 RINKRNRIDAYVTTDKLESDIFIFGIRDRNRALEGDTVYVELVDLDKVWEKKK 414
>gi|156388005|ref|XP_001634492.1| predicted protein [Nematostella vectensis]
gi|156221576|gb|EDO42429.1| predicted protein [Nematostella vectensis]
Length = 766
Score = 359 bits (921), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 234/657 (35%), Positives = 330/657 (50%), Gaps = 94/657 (14%)
Query: 304 GYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRR 363
G ++ PS +T S +N E A + T VV IIE+ R
Sbjct: 107 GASHEGNKTPSKGGTTPHTPESSKNKQRKNEEIPDAYLQQ------TAHVVYIIEKKHTR 160
Query: 364 DGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDS 423
G L F Y G VPD + +P+ + P+M + P
Sbjct: 161 -AASGNLKP---FQYNQGD------------VPDGLF---SPSDSRLPRMRIPHAKCPLG 201
Query: 424 IKKRLEEGDATIEMELVAARIDEWNEESP----FPQAHVLHVFGRGGEVEPQINAILYEN 479
R ++ +T L RI EW E +P F + G GE+EP+ I +E
Sbjct: 202 FFDRPQDFAST----LFVGRITEWPENAPMDNFFATGEISRSLGEAGEIEPETQGIFFEY 257
Query: 480 AICCSGFSPESLSCLPC-VPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLS 538
I F E+L CLP PW +P+ E R+D R+ C+FTIDP TA DLDDAL +RLS
Sbjct: 258 GIDPGPFPDEALDCLPKETPWSIPETEFAHRRDFRDECVFTIDPLTARDLDDALHCKRLS 317
Query: 539 DGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVD 598
DG+ VGVHIADVS+FV GT LD AQ R+TS YM+Q +PMLP L EE+ SLNP D
Sbjct: 318 DGLIEVGVHIADVSFFVKTGTPLDDIAQERATSTYMVQTVVPMLPRRLCEELCSLNPDED 377
Query: 599 RLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQL 658
RL FS+ W + G++ W GR +IRS K++YEHAQ++ID S + L P +
Sbjct: 378 RLTFSVVWIMTDQGEIKSDWKGRGIIRSRVKMAYEHAQEMIDKPNKKWSDSEL----PPI 433
Query: 659 YGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGRE 717
+ S++V+ + L ++++ L+ RF +GALRL+ K F D E G P + +
Sbjct: 434 AEGTDVSEIVKRVNLLAKIARQLRRNRFENGALRLDQVKLQFDLDKETGMPIGYHVYQQR 493
Query: 718 DLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS 777
+ N L EEFMLLAN T A I +AFPD ALLRRHP P+ +++ + C G++ + +S
Sbjct: 494 ESNKLIEEFMLLANMTVAHHIYKAFPDMALLRRHPKPHEKQMEDLLELCRNLGIKYNANS 553
Query: 778 SGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVY 837
S SL Q +IL+ +PM+ A YFC+G +++ ++GHYAL+ P+Y
Sbjct: 554 SKSIQVSLAQ----FPSGSAQHEILVQLTMKPMKNALYFCAGTVEEE-EYGHYALSVPLY 608
Query: 838 THFTSPLRRYPDLVVHRTLNAALE-AEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDA 896
THFTSP+RRY D++VHR L A+LE AE L DKDA
Sbjct: 609 THFTSPIRRYADVIVHRLLAASLELAEPL---------------------------DKDA 641
Query: 897 AESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKK 953
+ + ++A HCND KLA + + +L+ I +++
Sbjct: 642 VD----------------------VDSIAGHCNDCKLAAKTAGELSSELFFAIFVRE 676
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Query: 144 NKDDNPSHQSEAR-CKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQT 202
NK P S R K + +WS+E+V++ L++G+ K R++ N A+ + G +
Sbjct: 8 NKGGTPGKNSSPRKYKCYEKYWSLESVSDGLKRGELLKGALRISKRNFEMAWVSVAGQKR 67
Query: 203 DVLITGIAAQNRAVEGDFVLIKVDRLSLWAKMK 235
DV + G+ A+NRA++GD V + + + W MK
Sbjct: 68 DVYLEGVLARNRALDGDIVALNISPRNKWKLMK 100
>gi|427792415|gb|JAA61659.1| Putative exosomal 3'-5' exoribonuclease complex subunit, partial
[Rhipicephalus pulchellus]
Length = 1397
Score = 358 bits (919), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 191/468 (40%), Positives = 279/468 (59%), Gaps = 15/468 (3%)
Query: 400 YIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVL 459
++ +P ++P+++V ++ P S +R A L A + +W ++ FP +
Sbjct: 775 WVLFSPRDARFPRLMVPAQECPPSFFQR----PADFSHTLFLAELVKWLPDANFPLGRIR 830
Query: 460 HVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVP-WEVPQEELLSRKDLRNFCIF 518
+ G G + + NA+L I F P L L W+VP+EEL R+D R +F
Sbjct: 831 QLLGPAGSIPVETNAMLESYNIDHQEFPPGILDDLGVTTDWKVPEEELSGRRDFREELVF 890
Query: 519 TIDPSTATDLDDALSIERL--SDGISR----VGVHIADVSYFVLPGTALDIEAQVRSTSV 572
T+DP TA DLDDA+S RL ++G +R VGVHIADVS FV PGT LD AQ R+TSV
Sbjct: 891 TVDPKTARDLDDAISCRRLVVAEGDTRELWEVGVHIADVSRFVRPGTQLDQVAQKRATSV 950
Query: 573 YMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSY 632
Y++++ IPMLP LL + + SL+PG D+L FS+ W L S G V+ W GR++IRSCCKLSY
Sbjct: 951 YLVEQVIPMLPRLLCDHLCSLHPGEDKLTFSVVWTLTSDGRVLSEWFGRSIIRSCCKLSY 1010
Query: 633 EHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALR 692
EHAQD++D D + GE P+++G+ +++ ++ L +++ ++ +RF GALR
Sbjct: 1011 EHAQDLLD---DPDRERAPGE-LPEVFGKHTMAEIAECLRVLRGMTESMRRRRFDGGALR 1066
Query: 693 LENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHP 752
L+ K +F E PY + + + L EE MLLAN A + +AFP+ A LR HP
Sbjct: 1067 LDQVKVIFSLGENFQPYGISVYEHTESHRLIEELMLLANMAVAHRLYKAFPEEAFLRSHP 1126
Query: 753 APNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQL 812
P+ +L E EA CS +G+ LDT+S+G SL + ++L + ++PM++
Sbjct: 1127 PPDDAQLVEVEALCSAYGVPLDTTSAGTLQASLNAMVGTDELSQAKLNVLTHMLSKPMKM 1186
Query: 813 ASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
A YFC+G +D + HYAL P+YTHFTSP+RRY D+VVHR L AAL
Sbjct: 1187 AVYFCAGRREDPFSFSHYALNVPLYTHFTSPIRRYADIVVHRQLAAAL 1234
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 10/90 (11%)
Query: 169 VNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEGDFVLIKV--- 225
V +AL+KG+ + + R+N N +++ Q D+ I G+ +NRA+ GD V +K+
Sbjct: 245 VQQALKKGEVVEGVLRINPRNYEDSFISAPDSQMDIYIGGLHDRNRALNGDLVAVKIKPQ 304
Query: 226 -------DRLSLWAKMKGFSNNSSIVEDSN 248
DR+ LW + G S + ++ D++
Sbjct: 305 EEWKILWDRIHLWEQKTGQSIHDVLLGDNS 334
>gi|393907052|gb|EFO20496.2| hypothetical protein LOAG_07994 [Loa loa]
Length = 969
Score = 358 bits (919), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 212/567 (37%), Positives = 304/567 (53%), Gaps = 66/567 (11%)
Query: 397 DREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQA 456
+R + +P + P+M++ + P S R ++ I + AR+ EW + F +
Sbjct: 345 NRNWALFSPGDSRMPRMMIPAEQTPASFFDRPQDFAKFIYV----ARMVEWQATAQFARG 400
Query: 457 HVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP---CVPWEVPQEELLSRKDLR 513
+ G G++E + +L N + FS +LS LP V W++ ++E RKD R
Sbjct: 401 KLYKSLGMAGDIEAETEGLLLANDVDTREFSQAALSSLPITEAVEWKIDEKEFKYRKDFR 460
Query: 514 NFCIFTIDPSTATDLDDALSIERLSD--GIS----RVGVHIADVSYFVLPGTALDIEAQV 567
+ +FTIDPSTA DLDDAL I+ +SD G+ +GVHIADVS+FV GT LD A
Sbjct: 461 DETVFTIDPSTARDLDDALHIKPISDCDGVGNPGWEIGVHIADVSHFVQFGTELDHWAFS 520
Query: 568 RSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSC 627
R TSVY++ + IPMLP +L EE+ SLNP VDRL FS+ W +N G++ D W GRT+IRSC
Sbjct: 521 RGTSVYLVHKVIPMLPQILCEELCSLNPDVDRLTFSVVWKVNDQGEIFDEWFGRTIIRSC 580
Query: 628 CKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFT 687
CKLSYE+AQD I + + P+++ + +V ++ L++++ IL+ KRF
Sbjct: 581 CKLSYEYAQDFIANP----EKDFIPSELPKIFNGKKSDEVKEAVLRLHKIAFILRKKRFE 636
Query: 688 DGALRLENSKPVFLFDEY-GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSA 746
+G+L L+ K F DE G P + R++ NFL EEFMLLAN A I AFP +A
Sbjct: 637 NGSLYLDVPKLSFTLDETSGMPNGLSVGERKEANFLVEEFMLLANIAVARKIESAFPKTA 696
Query: 747 LLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYA 806
LLRRHP P ++ LR+ C K G +D SSS SL++ + + +L +
Sbjct: 697 LLRRHPPPKIKMLRDILEKCEKVGFAVDGSSSATISSSLQKYEGDNELKRTVVQMLTHLL 756
Query: 807 TRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
+ MQLA YFC G K+ D+ HYAL+ P YTHFTSP+RRYPD++VHR L+AAL
Sbjct: 757 MKSMQLALYFCVGSLKNRADYAHYALSVPFYTHFTSPIRRYPDIMVHRFLSAAL------ 810
Query: 867 WKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVAT 926
A L +E ++ A+
Sbjct: 811 --------------------------GYSPAPGLTVKEVETI----------------AS 828
Query: 927 HCNDRKLACRNVKDACVKLYMWILLKK 953
HCNDRKL R V +A ++ + +K+
Sbjct: 829 HCNDRKLTARTVSEASDDMFFGVFIKE 855
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 154 EARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYC--KIEGVQTDVLITGIAA 211
+ R F P+ S++AVN L GD K + RVN N E++ + Q D+LI G+
Sbjct: 58 KTRKPFFMPYMSLDAVNRGLANGDLIKGVLRVNQRNYEESFVDNPMGDEQQDILILGVHD 117
Query: 212 QNRAVEGDFVLIKVDRLSLWA 232
+NRA+ GD V++++ + W
Sbjct: 118 RNRALHGDVVVVRIKDRNCWV 138
>gi|427795403|gb|JAA63153.1| Putative exosomal 3'-5' exoribonuclease complex subunit, partial
[Rhipicephalus pulchellus]
Length = 1432
Score = 358 bits (918), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 191/468 (40%), Positives = 279/468 (59%), Gaps = 15/468 (3%)
Query: 400 YIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVL 459
++ +P ++P+++V ++ P S +R A L A + +W ++ FP +
Sbjct: 810 WVLFSPRDARFPRLMVPAQECPPSFFQR----PADFSHTLFLAELVKWLPDANFPLGRIR 865
Query: 460 HVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVP-WEVPQEELLSRKDLRNFCIF 518
+ G G + + NA+L I F P L L W+VP+EEL R+D R +F
Sbjct: 866 QLLGPAGSIPVETNAMLESYNIDHQEFPPGILDDLGVTTDWKVPEEELSGRRDFREELVF 925
Query: 519 TIDPSTATDLDDALSIERL--SDGISR----VGVHIADVSYFVLPGTALDIEAQVRSTSV 572
T+DP TA DLDDA+S RL ++G +R VGVHIADVS FV PGT LD AQ R+TSV
Sbjct: 926 TVDPKTARDLDDAISCRRLVVAEGDTRELWEVGVHIADVSRFVRPGTQLDQVAQKRATSV 985
Query: 573 YMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSY 632
Y++++ IPMLP LL + + SL+PG D+L FS+ W L S G V+ W GR++IRSCCKLSY
Sbjct: 986 YLVEQVIPMLPRLLCDHLCSLHPGEDKLTFSVVWTLTSDGRVLSEWFGRSIIRSCCKLSY 1045
Query: 633 EHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALR 692
EHAQD++D D + GE P+++G+ +++ ++ L +++ ++ +RF GALR
Sbjct: 1046 EHAQDLLD---DPDRERAPGE-LPEVFGKHTMAEIAECLRVLRGMTESMRRRRFDGGALR 1101
Query: 693 LENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHP 752
L+ K +F E PY + + + L EE MLLAN A + +AFP+ A LR HP
Sbjct: 1102 LDQVKVIFSLGENFQPYGISVYEHTESHRLIEELMLLANMAVAHRLYKAFPEEAFLRSHP 1161
Query: 753 APNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQL 812
P+ +L E EA CS +G+ LDT+S+G SL + ++L + ++PM++
Sbjct: 1162 PPDDAQLVEVEALCSAYGVPLDTTSAGTLQASLNAMVGTDELSQAKLNVLTHMLSKPMKM 1221
Query: 813 ASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
A YFC+G +D + HYAL P+YTHFTSP+RRY D+VVHR L AAL
Sbjct: 1222 AVYFCAGRREDPFSFSHYALNVPLYTHFTSPIRRYADIVVHRQLAAAL 1269
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 10/90 (11%)
Query: 169 VNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEGDFVLIKV--- 225
V +AL+KG+ + + R+N N +++ Q D+ I G+ +NRA+ GD V +K+
Sbjct: 236 VQQALKKGEVVEGVLRINPRNYEDSFISAPDSQMDIYIGGLHDRNRALNGDLVAVKIKPQ 295
Query: 226 -------DRLSLWAKMKGFSNNSSIVEDSN 248
DR+ LW + G S + ++ D++
Sbjct: 296 EEWKILWDRIHLWEQKTGQSIHDVLLGDNS 325
>gi|170582504|ref|XP_001896159.1| RNB-like protein [Brugia malayi]
gi|158596692|gb|EDP34994.1| RNB-like protein [Brugia malayi]
Length = 854
Score = 358 bits (918), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 213/567 (37%), Positives = 300/567 (52%), Gaps = 70/567 (12%)
Query: 397 DREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQA 456
+R + +P + P+M++ + P + R ++ I AR+ EW + F +
Sbjct: 345 NRNWALFSPGDSRMPRMMIPAEQTPAAFFDRPQDFAKFI----YVARMVEWQATAQFARG 400
Query: 457 HVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP---CVPWEVPQEELLSRKDLR 513
+ G G++E + +L N + FS +LS LP V W++ ++E RKD R
Sbjct: 401 KLYKSLGLAGDIEAETEGLLLANDVDTREFSQAALSSLPITEAVEWKIDEKEFKYRKDFR 460
Query: 514 NFCIFTIDPSTATDLDDALSIERLS--DGIS----RVGVHIADVSYFVLPGTALDIEAQV 567
+ +FTIDP TA DLDDAL I+ ++ DG VGVHIADVS+FV GT LD A
Sbjct: 461 DETVFTIDPVTARDLDDALHIKPIANCDGAGNPGWEVGVHIADVSHFVQFGTELDHWAFN 520
Query: 568 RSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSC 627
R TSVY++ + IPMLP +L EE+ SLNP VDRL FS+ W +N G++ D W GRT+IRSC
Sbjct: 521 RGTSVYLVHKVIPMLPQMLCEELCSLNPDVDRLTFSVVWKINDQGEIFDEWFGRTIIRSC 580
Query: 628 CKLSYEHAQD-IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRF 686
CKLSYEHAQD I+ + D SS P+++ + +V ++ L +++ IL+ KRF
Sbjct: 581 CKLSYEHAQDFIVHPEKDFVSSEL-----PKIFNGKKSDEVKEAVLRLNKIAVILRKKRF 635
Query: 687 TDGALRLENSKPVFLFDEY-GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDS 745
+G++ E K F DE G P LS E+ NFL EEFMLLAN A I +FP +
Sbjct: 636 ENGSINFEMPKLNFTLDETSGMPNGLCLS--EEANFLVEEFMLLANMAVARKIELSFPKT 693
Query: 746 ALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINY 805
ALLRRHP P ++ LR+ C K G ++D SSS SL + + + +L
Sbjct: 694 ALLRRHPPPKIKMLRDILEKCEKVGFEIDGSSSATIASSLLKYEGNNELKRTVVQMLTYL 753
Query: 806 ATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 865
+ MQLA YFC G K+ D+ HYAL+ P YTHFTSP+RRYPD++VHR L+AAL
Sbjct: 754 LMKSMQLALYFCVGSLKNRADYAHYALSVPFYTHFTSPIRRYPDIMVHRFLSAAL----- 808
Query: 866 YWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVA 925
A L +E ++ A
Sbjct: 809 ---------------------------GYSPAPGLTVKEVETI----------------A 825
Query: 926 THCNDRKLACRNVKDACVKLYMWILLK 952
+HCNDRKL + V +A ++ + +K
Sbjct: 826 SHCNDRKLTAKTVSEASDDMFFGVFIK 852
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 143 TNKDDNPSHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCK--IEGV 200
+N+ N + R F P+ S++AVN + GD K + RVN N E++ +
Sbjct: 46 SNQLRNIQQNQKTRKPFFMPYMSLDAVNRGIANGDLIKGILRVNQRNYEESFVDNPMGDE 105
Query: 201 QTDVLITGIAAQNRAVEGDFVLIKVDRLSLWA 232
Q D+LI G+ +NRA+ GD V++++ + W
Sbjct: 106 QQDILILGVHDRNRALHGDVVVVRIKDRNCWV 137
>gi|312082752|ref|XP_003143574.1| hypothetical protein LOAG_07994 [Loa loa]
Length = 954
Score = 358 bits (918), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 212/567 (37%), Positives = 304/567 (53%), Gaps = 66/567 (11%)
Query: 397 DREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQA 456
+R + +P + P+M++ + P S R ++ I + AR+ EW + F +
Sbjct: 330 NRNWALFSPGDSRMPRMMIPAEQTPASFFDRPQDFAKFIYV----ARMVEWQATAQFARG 385
Query: 457 HVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP---CVPWEVPQEELLSRKDLR 513
+ G G++E + +L N + FS +LS LP V W++ ++E RKD R
Sbjct: 386 KLYKSLGMAGDIEAETEGLLLANDVDTREFSQAALSSLPITEAVEWKIDEKEFKYRKDFR 445
Query: 514 NFCIFTIDPSTATDLDDALSIERLSD--GIS----RVGVHIADVSYFVLPGTALDIEAQV 567
+ +FTIDPSTA DLDDAL I+ +SD G+ +GVHIADVS+FV GT LD A
Sbjct: 446 DETVFTIDPSTARDLDDALHIKPISDCDGVGNPGWEIGVHIADVSHFVQFGTELDHWAFS 505
Query: 568 RSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSC 627
R TSVY++ + IPMLP +L EE+ SLNP VDRL FS+ W +N G++ D W GRT+IRSC
Sbjct: 506 RGTSVYLVHKVIPMLPQILCEELCSLNPDVDRLTFSVVWKVNDQGEIFDEWFGRTIIRSC 565
Query: 628 CKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFT 687
CKLSYE+AQD I + + P+++ + +V ++ L++++ IL+ KRF
Sbjct: 566 CKLSYEYAQDFIANP----EKDFIPSELPKIFNGKKSDEVKEAVLRLHKIAFILRKKRFE 621
Query: 688 DGALRLENSKPVFLFDEY-GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSA 746
+G+L L+ K F DE G P + R++ NFL EEFMLLAN A I AFP +A
Sbjct: 622 NGSLYLDVPKLSFTLDETSGMPNGLSVGERKEANFLVEEFMLLANIAVARKIESAFPKTA 681
Query: 747 LLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYA 806
LLRRHP P ++ LR+ C K G +D SSS SL++ + + +L +
Sbjct: 682 LLRRHPPPKIKMLRDILEKCEKVGFAVDGSSSATISSSLQKYEGDNELKRTVVQMLTHLL 741
Query: 807 TRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
+ MQLA YFC G K+ D+ HYAL+ P YTHFTSP+RRYPD++VHR L+AAL
Sbjct: 742 MKSMQLALYFCVGSLKNRADYAHYALSVPFYTHFTSPIRRYPDIMVHRFLSAAL------ 795
Query: 867 WKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVAT 926
A L +E ++ A+
Sbjct: 796 --------------------------GYSPAPGLTVKEVETI----------------AS 813
Query: 927 HCNDRKLACRNVKDACVKLYMWILLKK 953
HCNDRKL R V +A ++ + +K+
Sbjct: 814 HCNDRKLTARTVSEASDDMFFGVFIKE 840
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 154 EARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYC--KIEGVQTDVLITGIAA 211
+ R F P+ S++AVN L GD K + RVN N E++ + Q D+LI G+
Sbjct: 43 KTRKPFFMPYMSLDAVNRGLANGDLIKGVLRVNQRNYEESFVDNPMGDEQQDILILGVHD 102
Query: 212 QNRAVEGDFVLIKVDRLSLWA 232
+NRA+ GD V++++ + W
Sbjct: 103 RNRALHGDVVVVRIKDRNCWV 123
>gi|198421184|ref|XP_002119190.1| PREDICTED: similar to DIS3 mitotic control homolog-like 2 [Ciona
intestinalis]
Length = 925
Score = 357 bits (917), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 201/529 (37%), Positives = 285/529 (53%), Gaps = 33/529 (6%)
Query: 338 SAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWF-NYKGGSRKDAKKNRSSLSVP 396
S + + R TG VV I+E+ R+ + G L +++ N K + + KN +L +P
Sbjct: 244 SPTVGKFNKTRKTGVVVGIVEKKSRQ-VVTGHLRLDKAKPNDKFITLETVSKNNQNLQIP 302
Query: 397 DREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQA 456
E ++ E+ I L +I +W SP P
Sbjct: 303 REEVMK--------------------------EKAKQDISNVLFVGKILKWEPHSPLPLG 336
Query: 457 HVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC-VPWEVPQEELLSRKDLRNF 515
+ G G++EP+ IL ++ + S FS CLP +PW +PQ E R+D +
Sbjct: 337 ELCQSIGEIGQIEPETTRILIDHEVDFSEFSNAVNQCLPSDLPWTIPQAERAKRRDFTSE 396
Query: 516 CIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYML 575
CIF+IDP +A DLDDAL ++L +G +GVHIADVSYFV PGTALD A R TSVY++
Sbjct: 397 CIFSIDPPSARDLDDALHCKQLPNGTYEIGVHIADVSYFVHPGTALDKVASERCTSVYLV 456
Query: 576 QRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHA 635
QR IPMLP LL EE+ SLNPG +RLAFS+ W++ G ++ +W GR+VIRSC K SY+HA
Sbjct: 457 QRVIPMLPRLLCEELCSLNPGTERLAFSVVWNITEQGKILSQWFGRSVIRSCAKFSYDHA 516
Query: 636 QDIIDGK---FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALR 692
Q ID F S +P++ G F +++ + L++VS+ L+ +R +GALR
Sbjct: 517 QSFIDNPDRDFSQPESACQENEFPEITGNFSMNEIKTKVLGLFKVSQNLRKQRIDNGALR 576
Query: 693 LENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH 751
L+ + + + E G P + N L EEFMLLAN A + + P A LR H
Sbjct: 577 LDQVRLSYTLNSETGLPNGCYTYEYKKSNELIEEFMLLANMAVAHKLYTSIPTHAFLRSH 636
Query: 752 PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQ 811
P +++F + C GL++D SSS +SL A + L A +P Q
Sbjct: 637 SEPKEEMMQDFVSTCMALGLEVDASSSEALAESLRTAPGADELAKYRKQALFLLAIKPQQ 696
Query: 812 LASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
LA+Y C+G D++ + HYAL P+YTHFTSP+RRY DLVVHR L A +
Sbjct: 697 LATYICAGSVSDESKYHHYALNVPLYTHFTSPIRRYADLVVHRQLAAVI 745
>gi|427781907|gb|JAA56405.1| Putative exosomal 3'-5' exoribonuclease complex subunit
[Rhipicephalus pulchellus]
Length = 965
Score = 357 bits (916), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 191/468 (40%), Positives = 279/468 (59%), Gaps = 15/468 (3%)
Query: 400 YIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVL 459
++ +P ++P+++V ++ P S +R A L A + +W ++ FP +
Sbjct: 343 WVLFSPRDARFPRLMVPAQECPPSFFQR----PADFSHTLFLAELVKWLPDANFPLGRIR 398
Query: 460 HVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVP-WEVPQEELLSRKDLRNFCIF 518
+ G G + + NA+L I F P L L W+VP+EEL R+D R +F
Sbjct: 399 QLLGPAGSIPVETNAMLESYNIDHQEFPPGILDDLGVTTDWKVPEEELSGRRDFREELVF 458
Query: 519 TIDPSTATDLDDALSIERL--SDGISR----VGVHIADVSYFVLPGTALDIEAQVRSTSV 572
T+DP TA DLDDA+S RL ++G +R VGVHIADVS FV PGT LD AQ R+TSV
Sbjct: 459 TVDPKTARDLDDAISCRRLVVAEGDTRELWEVGVHIADVSRFVRPGTQLDQVAQKRATSV 518
Query: 573 YMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSY 632
Y++++ IPMLP LL + + SL+PG D+L FS+ W L S G V+ W GR++IRSCCKLSY
Sbjct: 519 YLVEQVIPMLPRLLCDHLCSLHPGEDKLTFSVVWTLTSDGRVLSEWFGRSIIRSCCKLSY 578
Query: 633 EHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALR 692
EHAQD++D D + GE P+++G+ +++ ++ L +++ ++ +RF GALR
Sbjct: 579 EHAQDLLD---DPDRERAPGE-LPEVFGKHTMAEIAECLRVLRGMTESMRRRRFDGGALR 634
Query: 693 LENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHP 752
L+ K +F E PY + + + L EE MLLAN A + +AFP+ A LR HP
Sbjct: 635 LDQVKVIFSLGENFQPYGISVYEHTESHRLIEELMLLANMAVAHRLYKAFPEEAFLRSHP 694
Query: 753 APNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQL 812
P+ +L E EA CS +G+ LDT+S+G SL + ++L + ++PM++
Sbjct: 695 PPDDAQLVEVEALCSAYGVPLDTTSAGTLQASLNAMVGTDELSQAKLNVLTHMLSKPMKM 754
Query: 813 ASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
A YFC+G +D + HYAL P+YTHFTSP+RRY D+VVHR L AAL
Sbjct: 755 AVYFCAGRREDPFSFSHYALNVPLYTHFTSPIRRYADIVVHRQLAAAL 802
>gi|303276508|ref|XP_003057548.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461900|gb|EEH59193.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 494
Score = 355 bits (911), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 210/532 (39%), Positives = 292/532 (54%), Gaps = 74/532 (13%)
Query: 439 LVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICC-SGFSPESLSCLPCV 497
LV+A+I W+ + +P A ++ + G +E A++ E+AI FS ++++CLP V
Sbjct: 1 LVSAKITRWSAGAVYPHAALIEILGEANALETVTAALIAEHAILGPDDFSADAIACLPEV 60
Query: 498 P-------WEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIAD 550
P WEVP EE +R+D + +IDP TA DLDDAL DG+ VGVHIAD
Sbjct: 61 PDRASGERWEVPSEERATRRDFTKVRVASIDPPTARDLDDALHATMRDDGVLVVGVHIAD 120
Query: 551 VSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNS 610
VS+FV P +ALD EA R+TS Y +Q+ +PMLP LL +++ SLNPGV+RL FS+ W++
Sbjct: 121 VSHFVTPNSALDKEAGRRATSTYFVQKVMPMLPRLLCDDLCSLNPGVERLTFSVEWEMTP 180
Query: 611 AGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRS 670
G V+ W GR VIRSC KL Y AQ + +N G P+ V +
Sbjct: 181 DGVVLSEWFGRGVIRSCAKLDYGTAQSVA-----AADANDPGAWDPRA--------VAET 227
Query: 671 IKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLA 730
I L ++ ++ +RF +GALRL+ SK F D G P + + N L EEFMLLA
Sbjct: 228 IGLLSRAARGMRARRFQNGALRLDQSKLSFELDAAGQPSSAAAYVTREANQLVEEFMLLA 287
Query: 731 NKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQARE 790
N T A IA A+PD ALLR HP P+ RK+++ E F ++ GL++D SSSG H+SL R
Sbjct: 288 NTTVATFIASAYPDRALLRCHPEPDERKVKQLETFAAERGLRVDASSSGALHRSLTALRA 347
Query: 791 KLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDL 850
D Y + +L AT PMQLA YFC+G +D+ WGHYALAF YTHFTSP+RRYPD+
Sbjct: 348 SNPDGYEVAKLL---ATLPMQLARYFCTGK-QDEETWGHYALAFERYTHFTSPIRRYPDV 403
Query: 851 VVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAA 910
VVHR + AAL+A G +GR + ++ +GR
Sbjct: 404 VVHRIVAAALDA------------------GFKGR-------RANRSDDGDGR------- 431
Query: 911 LKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLFSCLI 962
CN+RKLA + ++ + Y+ L+ + S ++
Sbjct: 432 -----------------CNERKLAAKAAQEGSIHAYLCAFLRTTPKVVSGIV 466
>gi|308810501|ref|XP_003082559.1| Exosomal 3'-5' exoribonuclease complex, subunit Rrp44/Dis3 (ISS)
[Ostreococcus tauri]
gi|116061028|emb|CAL56416.1| Exosomal 3'-5' exoribonuclease complex, subunit Rrp44/Dis3 (ISS)
[Ostreococcus tauri]
Length = 609
Score = 355 bits (910), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 203/497 (40%), Positives = 280/497 (56%), Gaps = 43/497 (8%)
Query: 473 NAILYENAICCSGFSPESLSCLPCVP----WEVPQEELLSRKDLRNFCIFTIDPSTATDL 528
I+ E+ I FS ++ +CLP V W++P EE+ RKD R +F+IDP TA DL
Sbjct: 3 KVIVDEHRIVSEDFSAQAEACLPKVQPREHWKIPAEEMKKRKDFREKLVFSIDPPTARDL 62
Query: 529 DDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSE 588
DDALS+E + +G RVGVHIADVS+FVLP TALD EA+ R+T+ Y++ PMLP LL E
Sbjct: 63 DDALSVEVMPEGTLRVGVHIADVSHFVLPDTALDEEARQRATTTYLVHTIFPMLPRLLCE 122
Query: 589 EVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESS 648
+ SLNPGV+RL+FS+ W + G V R VI+S KLSY H Q++ID D +
Sbjct: 123 NLCSLNPGVERLSFSVEWVMTREGMVKRVSFTRGVIKSAAKLSYIHVQNVIDAGSDTTKA 182
Query: 649 NTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTP 708
+ L G DV+ SI L +K ++ +RF GA+RL+ K F ++ P
Sbjct: 183 KDALQDI-DLSGNHTLDDVIESISILNSTAKAMRKRRFEAGAVRLDQPKIGFELNDDLEP 241
Query: 709 YDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSK 768
++ D N L EEFMLLAN A+ IA FP A+LR HP PN RKL E F +
Sbjct: 242 VNAEPYVIRDSNRLVEEFMLLANMYVAQYIATIFPSHAMLRCHPPPNERKLEELYTFAKE 301
Query: 769 HGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWG 828
H + +D SSS + HQSL +D +F+I+ AT+PMQLA YFC+G D+ W
Sbjct: 302 HDIDIDVSSSRRLHQSLSAIANGSRD---VFNIVQLLATKPMQLAKYFCTGTI-DEEHWH 357
Query: 829 HYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLT 888
HYALA P YTHFTSP+RRYPD++VHR L AA+E
Sbjct: 358 HYALAAPFYTHFTSPIRRYPDIIVHRLLAAAIE--------------------------- 390
Query: 889 GIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMW 948
+D+D +ES+ E + ++G+ ++ VA HCNDRKLA + ++ L++
Sbjct: 391 ---HDRDDSESVVVAELVE----RHGLLPPEVCSGVANHCNDRKLAAKYAQERSQHLFLC 443
Query: 949 ILLKKKEVLFSCLILYL 965
L+K ++ ++ L
Sbjct: 444 KYLQKNHLVARAIVRQL 460
>gi|443895203|dbj|GAC72549.1| exosomal 3'-5' exoribonuclease complex, subunit Rrp44/Dis3
[Pseudozyma antarctica T-34]
Length = 1399
Score = 355 bits (910), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 237/727 (32%), Positives = 351/727 (48%), Gaps = 88/727 (12%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R +F + + L G + R+N NR +AY E + +D+ I+G +NRA
Sbjct: 522 RKALFGNYLPQGTLPTLLAHGKIVVGVLRINKRNRSDAYVSTEVLDSDIFISGSKDRNRA 581
Query: 216 VEGDFVLIK-VDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYS 274
+EGD V ++ +D + +W N ED E K+K D+ E +
Sbjct: 582 LEGDLVAVELLDPVEVW-------NVKREKEDKKKRKEEQSGQFSRKPDKAKDDLEVEGA 634
Query: 275 NCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGH----HPSTSDSTEKVSSSQ-QND 329
L+ ++ + + ++ER +G PS++ + EK + + Q +
Sbjct: 635 QLRLIEDEEENEQSPPPLAGHVVAIVERSPGQLFSGTLGLLRPSSAATKEKQQAERVQRE 694
Query: 330 GMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKN 389
G++A+ P +P +++ WF
Sbjct: 695 GVSALA---------PEVKPRPKII--------------------WFR------------ 713
Query: 390 RSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNE 449
PT + P + + P++ EEG + L A I W
Sbjct: 714 ---------------PTDKRVPLIAIPADQAPENFWA--EEGQESFNSRLFVACIKRWPI 756
Query: 450 ESPFPQAHVLHVFGRGGEVEPQINAILYEN-AICCSGFSPESLSCLPCVPWEVPQEELLS 508
S P ++ G G VE + A+L + + F+ +L CLP +PW++P++E +
Sbjct: 757 TSLHPFGALVEEIGVIGNVEAETQALLKDTLSSATEAFTEGALKCLPPLPWKIPEKEYET 816
Query: 509 RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVR 568
RKD R+ +FTIDP TA DLDDA+ + RL +G VGVHIADVS+FV G++LD EA+ R
Sbjct: 817 RKDFRSNRVFTIDPETAKDLDDAVHVVRLDNGNFEVGVHIADVSHFVKLGSSLDREARKR 876
Query: 569 STSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCC 628
TSVY++QR IPMLP LSEE+ SL PGV+RL FS + +N V+ W G+++IRSC
Sbjct: 877 GTSVYLVQRAIPMLPPTLSEELCSLVPGVERLTFSAVFTMNKDAQVLSSWFGKSIIRSCA 936
Query: 629 KLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTD 688
KL+Y AQ +I+G GE + D+ I L+++++ ++ +RF
Sbjct: 937 KLAYADAQKVIEG----------GELPKDKIKEHTSKDIADDILVLHQLAQKMRARRFEG 986
Query: 689 GALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALL 748
GALR++N K F DE G P D+ + D + L EEFMLLAN + A+ IA PD ALL
Sbjct: 987 GALRIDNVKLSFRLDEDGLPTDAGIYSSYDAHRLIEEFMLLANLSVAQQIAAGLPDLALL 1046
Query: 749 RRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATR 808
RRH P R+L F G ++D SS G H+SL + +KDD L T
Sbjct: 1047 RRHEKPLDRRLEGFVRRAKSMGYEIDISSGGALHRSLRE----IKDDSAR-QALQALVTN 1101
Query: 809 PMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWK 868
M A YFC+G D + HYAL P+YTHFTSP+RRY DL+VHR L L + +
Sbjct: 1102 AMMKAKYFCTG-MVDIAKYQHYALNVPLYTHFTSPIRRYADLMVHRQLETVLAGQDKFGV 1160
Query: 869 HRRMLPK 875
R + K
Sbjct: 1161 DREAMAK 1167
>gi|221123214|ref|XP_002154262.1| PREDICTED: DIS3-like exonuclease 2-like [Hydra magnipapillata]
Length = 797
Score = 353 bits (906), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 217/576 (37%), Positives = 311/576 (53%), Gaps = 34/576 (5%)
Query: 292 SEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQN--DGMNAIERLSAMISSYPTKRP 349
S YN+ I EG + N P + E + S NA + S ++ +
Sbjct: 65 SADYNERDILLEGVSSRNRALPGDVVAVELIPQSLTKVIHENNAEKNTSEILVNETNNVK 124
Query: 350 TGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPK 409
G+VV IIE+ R GF+ NY+ + ++P +
Sbjct: 125 RGKVVFIIEKKHPRVA-TGFI-----MNYRSNKFG---------------FAYMSPVDSR 163
Query: 410 YPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVE 469
P++++ ++ P R ++ T L ARI EW + F ++ G G +E
Sbjct: 164 LPRILIPLQQCPPLFLTRPQDFCKT----LFVARIIEWEIDMGFAYGELMRSLGEAGNIE 219
Query: 470 PQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDL 528
+ +I+ NAI S F + ++CLP W + EE RKDLR CIFTIDP+TA DL
Sbjct: 220 AETESIIAANAIDSSPFGEDIIACLPNGDSWSIKPEEFKKRKDLREECIFTIDPATARDL 279
Query: 529 DDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSE 588
DDA+S +++ D + VGVHIADVS+F+ + LDI A+ R+TSVY+ Q+ IPMLP +L E
Sbjct: 280 DDAVSCKKIGDDLFEVGVHIADVSFFIEEESKLDIAAKSRATSVYLCQKVIPMLPAVLCE 339
Query: 589 EVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESS 648
+ SLNPGVDRLA+S+ W++ S G V+ W GR+VIRSC KLSY HAQ +I+ D S
Sbjct: 340 RLCSLNPGVDRLAYSVIWNMRSDGTVLTEWFGRSVIRSCVKLSYTHAQQLIETGTD---S 396
Query: 649 NTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGT 707
+ E +P + G F V I L+++S+ L+ +RF GALR++ K F D E G
Sbjct: 397 DLKKEEFPIVEG-FSLEKVRDVIHCLFKISQNLRKRRFDSGALRIDQPKLSFNLDSETGL 455
Query: 708 PYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCS 767
P + +D N L EEFMLLAN I A PD A+LR HPAP+ L+E + CS
Sbjct: 456 PNGCSVYEYKDSNRLIEEFMLLANMAVGRKIYAAHPDQAILRNHPAPHPIMLQEVQRICS 515
Query: 768 KHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTD 826
+ + D S S +SL + D + + + +P Q A+YFC+G D++
Sbjct: 516 AYSIFFDISDSSSISKSLTNLSQLESDSRMFIEAAVTMLCAKPFQNATYFCTGTVDDESL 575
Query: 827 WGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEA 862
+ HYAL P+YTHFTSP+RRYPD++VHR L AAL++
Sbjct: 576 YRHYALNVPIYTHFTSPIRRYPDILVHRLLTAALDS 611
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 42/71 (59%)
Query: 160 FAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEGD 219
F P+ + E ++ L++G K + R+N +A+ + + D+L+ G++++NRA+ GD
Sbjct: 29 FEPYITKEKCSDGLKRGILIKGVLRINPKKFTDAFISADYNERDILLEGVSSRNRALPGD 88
Query: 220 FVLIKVDRLSL 230
V +++ SL
Sbjct: 89 VVAVELIPQSL 99
>gi|388851815|emb|CCF54621.1| related to SSD1 protein [Ustilago hordei]
Length = 1397
Score = 351 bits (900), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 238/727 (32%), Positives = 348/727 (47%), Gaps = 88/727 (12%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R +F + + L G + R+N NR +AY E + +D+ I+G +NRA
Sbjct: 527 RKALFGNYLPQGTLPTLLAHGKIVVGVLRINKRNRSDAYVTTEVLDSDIFISGSKDRNRA 586
Query: 216 VEGDFVLIK-VDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYS 274
+EGD V ++ +D L +W N ED E S K+K D+ E +
Sbjct: 587 LEGDLVAVELLDPLEVW-------NIKKEKEDKKKRKEEQSGQSSRKPDKAKDDLEVEGA 639
Query: 275 NCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGH----HPSTSDSTEKVSSSQ-QND 329
L+ ++ + + ++ER +G PS++ + EK + + Q D
Sbjct: 640 QLRLIEDEEETEQNPPQLAGHVVAIVERSPGQLFSGTLAMLRPSSAATKEKQQAERVQRD 699
Query: 330 GMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKN 389
G A+ P +P +++ WF
Sbjct: 700 GPGALA---------PEVKPRPKII--------------------WFR------------ 718
Query: 390 RSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNE 449
PT + P + + P+ EEG + L A I W
Sbjct: 719 ---------------PTDKRVPLIAIPADQAPEDFWA--EEGQESFNSRLFVACIKRWPI 761
Query: 450 ESPFPQAHVLHVFGRGGEVEPQINAILYEN-AICCSGFSPESLSCLPCVPWEVPQEELLS 508
S P ++ G G VE + A+L + + FS +L CLP +PW++P+ E +
Sbjct: 762 TSLHPFGALVEEIGVIGNVEAETQALLKDTLSSATEVFSEGALKCLPPMPWKIPEREYET 821
Query: 509 RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVR 568
R+D R+ +FTIDP TA DLDDA+ + RL +G VGVHI DVS+FV G++LD EA+ R
Sbjct: 822 RRDFRSLRVFTIDPETAKDLDDAVHVVRLGNGQYEVGVHITDVSHFVKLGSSLDREARKR 881
Query: 569 STSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCC 628
TSVY++QR IPMLP LSEE+ SL PGV+RL FS + +N V+ W G++VIRSC
Sbjct: 882 GTSVYLVQRVIPMLPPTLSEELCSLVPGVERLTFSAVFTMNKDAQVIKSWFGKSVIRSCA 941
Query: 629 KLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTD 688
+L+Y AQ +I+G GE + + +++ I L+++++ ++ +RF
Sbjct: 942 QLAYADAQKVIEG----------GELPKDKIKEHKSNEIADDILILHKLAQKMRARRFET 991
Query: 689 GALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALL 748
GALR++N K F DE G P D+ + D + L EEFML AN A+ IA PD ALL
Sbjct: 992 GALRIDNVKLSFRLDENGLPTDASIYSSYDAHRLIEEFMLQANMAVAQQIAAGLPDLALL 1051
Query: 749 RRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATR 808
RRH P R+L F + G ++D SS G H+SL + +KDD L T
Sbjct: 1052 RRHEKPLDRRLEGFLSRAKSMGYEIDISSGGALHRSLRE----IKDDNAR-QALQALVTN 1106
Query: 809 PMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWK 868
M A YFC+G D + HYAL P+YTHFTSP RRY DL+VHR L A L + +
Sbjct: 1107 AMMKAKYFCTG-MVDIAKYHHYALNVPLYTHFTSPSRRYADLMVHRQLEAVLADQDKFPF 1165
Query: 869 HRRMLPK 875
R + K
Sbjct: 1166 DRETMAK 1172
>gi|342320254|gb|EGU12196.1| SSD1 protein [Rhodotorula glutinis ATCC 204091]
Length = 1450
Score = 349 bits (895), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 247/719 (34%), Positives = 346/719 (48%), Gaps = 74/719 (10%)
Query: 148 NPSHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLIT 207
P+ Q++ R +FAP+ ++ L G RVN NR +AY + + D+ I
Sbjct: 561 GPNGQNQMRKTLFAPYLPQASIPPLLAAGKLVIGTLRVNKRNRSDAYVATDVLDADIYIC 620
Query: 208 GIAAQNRAVEGDFV---LIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGK 264
G +NRA+EGD V L+ VD + K K + S P A + + K
Sbjct: 621 GSKDRNRALEGDIVAVELLDVDEVWGTKKDKEEKKRRKEEQASYDPKTARDLRK---QDK 677
Query: 265 SKVDVSYEYSNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSS 324
K DV E L ++ + + + ++ER +
Sbjct: 678 KKDDVEVEGQGLLLFEDEEVTDETKPQFAGHVVAVLER--------------------AP 717
Query: 325 SQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRK 384
Q GM + RP+ + + RR+ + + +GG
Sbjct: 718 GQLFSGMLGV------------LRPSSAATQQKQDAERRE--------REGVDLRGGH-- 755
Query: 385 DAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARI 444
+ N SS P + I PT + P + + + P + E+ L A I
Sbjct: 756 -GQSNGSSQPPP--KIIWFRPTDKRVPLIAIPTEQAPADFVEHSEK----YSDRLFVACI 808
Query: 445 DEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQE 504
W S P ++ G G++E + NA+L + FS CLP PW +P
Sbjct: 809 KRWPITSLHPFGQLVEELGPIGDIETETNALLKDCNFTAEDFSDSVNKCLPPTPWSIPDR 868
Query: 505 ELLS--RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALD 562
EL R+DLR+ +FTIDP TA DLDDAL I + DG VGVHIADVS+FV P T LD
Sbjct: 869 ELQPDVRRDLRDKRVFTIDPETAKDLDDALHIIQNEDGTFEVGVHIADVSHFVKPNTPLD 928
Query: 563 IEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRT 622
EA+ R+T+VY++QR +PMLP LSEE+ SLN G D+L FS+ + L G +V W G+T
Sbjct: 929 REARKRATTVYLVQRAVPMLPPTLSEELCSLNAGSDKLTFSVIFTLTPEGQIVSTWFGKT 988
Query: 623 VIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRS-IKSLYEVSKIL 681
VI S KL+Y AQ +ID + TL EG E + V + +K L ++K L
Sbjct: 989 VINSKVKLAYSDAQHVID-------NGTLPEGK---IADAELREGVETDVKRLAGIAKHL 1038
Query: 682 KDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARA 741
+ +RF GALR++N K F DE+G P D+ R++ N L EEFML+AN A IA
Sbjct: 1039 RHRRFDSGALRIDNVKVSFRLDEFGLPVDAHEYARKEANELIEEFMLMANIAVAGKIASG 1098
Query: 742 FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDI 801
PD +LLRRH P R+L F + GL +D SSS S+ K+ D
Sbjct: 1099 LPDQSLLRRHEEPIDRRLDAFVQRMRRLGLDIDGSSSHALMDSI----VKITDPGERL-T 1153
Query: 802 LINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
L + +TR MQ A YFC+G D + + HYAL P+YTHFTSP+RRY D++VHR L A L
Sbjct: 1154 LQHLSTRSMQRAKYFCTG-MLDISKYRHYALNVPLYTHFTSPIRRYADVIVHRQLEAVL 1211
>gi|355684016|gb|AER97264.1| DIS3 mitotic control-like protein -like 2 [Mustela putorius furo]
Length = 509
Score = 348 bits (892), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 198/437 (45%), Positives = 255/437 (58%), Gaps = 22/437 (5%)
Query: 497 VPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVL 556
+PW +P EE R+DLR CIFTIDPSTA DLDDALS + L+DG VGVHIADVSYFV
Sbjct: 1 LPWTIPPEEFSKRRDLRKDCIFTIDPSTARDLDDALSCKPLADGNFEVGVHIADVSYFVP 60
Query: 557 PGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD 616
G+ LD A R+TSVY++Q+ IPMLP LL EE+ SL+P D+L FS+ W L G ++
Sbjct: 61 EGSPLDKVAAERATSVYLVQKVIPMLPRLLCEELCSLHPMTDKLTFSVIWTLTPEGKILG 120
Query: 617 RWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 676
W GRT+IRSC KLSYEHAQ +I+ + L P + + +V R++ +L+
Sbjct: 121 EWFGRTIIRSCTKLSYEHAQSMIESPNEKIPEKEL----PPISPEHTSEEVHRAVLNLHG 176
Query: 677 VSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 735
++K L+ +RF DGALRL+ K F D E G P + D N L EEFMLLAN A
Sbjct: 177 IAKELRKQRFVDGALRLDQLKLAFTLDHETGLPQGCHIYEYRDSNKLVEEFMLLANMAVA 236
Query: 736 EVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDD 795
R FP+ ALLRRHP P + L + FC + GL +D SS+G ++SL K
Sbjct: 237 HKTHRTFPERALLRRHPPPQTKMLNDLVEFCEQLGLPMDFSSAGALNKSLTTTFGDDKYS 296
Query: 796 YVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRT 855
++L N +RPMQ+A YFCSG +D T + HYAL P+YTHFTSP+RR+ D++VHR
Sbjct: 297 LARKEVLTNMCSRPMQMALYFCSGMLRDQTQFRHYALNVPLYTHFTSPIRRFADVLVHRL 356
Query: 856 LNAALEAEKLYWKHRRMLPKN----NHREGVRGR---FLTGIFYDKDAAES--LEGR--- 903
L AAL +L L K N R R TG+F+ ES LE
Sbjct: 357 LAAALGCGELPDLEPEALQKQADHCNDRRMASKRVQELSTGLFFAVLVKESGPLESEAMV 416
Query: 904 -----EALSVAALKYGV 915
+A V L+YGV
Sbjct: 417 LGVLNQAFDVLVLRYGV 433
>gi|334325039|ref|XP_001374171.2| PREDICTED: DIS3-like exonuclease 2-like [Monodelphis domestica]
Length = 740
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 241/682 (35%), Positives = 341/682 (50%), Gaps = 75/682 (10%)
Query: 149 PSHQSEARCK-IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLIT 207
PS S+ + + +F + S E+V+ L++G + + R+N EA+ D+ I
Sbjct: 38 PSKHSQGKKRSVFESYMSKESVSAGLKRGTLIQGVLRINPKKYHEAFIPSPDGTRDIFIN 97
Query: 208 GIAAQNRAVEGDFVLIKVDRLSLWAKMK-------GFSNNSSIVEDSNLPTEANGMHSDI 260
G+ A+NRA+ GD V++++ W +K G + S V + L T +
Sbjct: 98 GVVARNRALNGDVVVVELLPKDRWKVIKTDDSDKGGDTVPESDVTEELLRTPPQQLGRR- 156
Query: 261 CKGKSKVDVSYEYSNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTE 320
C S DV E +E G H +E ++ E N + G T+
Sbjct: 157 CTADSP-DVILEAQLNDSETEDGQEHGPSVLAEVTQEK--GNENTNILPG--------TQ 205
Query: 321 KVSSSQQNDGM---NAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFN 377
S Q+ + N ++R + +VV I+E+ R GF+
Sbjct: 206 GNSPKSQDTRLCPDNLLQR-------------SAKVVYILEKKHSR-AATGFI------- 244
Query: 378 YKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEM 437
+ A KN R+ +P+ + P++ V + D P + R +
Sbjct: 245 -----KPLADKNSELF----RKCALFSPSDHRVPRVYVPLADCPADLVSRPND----YAQ 291
Query: 438 ELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-C 496
L RI W E S F H+ G+ GE+EP+ IL E + S FSPE L CLP
Sbjct: 292 ALFVCRIVAWEEHSHFAVGHLAKSLGQAGEIEPETEGILMEYGVDFSDFSPEVLECLPQA 351
Query: 497 VPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVL 556
+PW +P E R+DLR C+FTIDP+TA DLDDALS L DG VGVHIADVSYFV
Sbjct: 352 LPWTIPPAEFSKRRDLRKDCVFTIDPATARDLDDALSCRPLPDGNFEVGVHIADVSYFVP 411
Query: 557 PGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD 616
G+ALD A R+TSVY++Q+ +PMLP LL EE+ SLNP D+L FS+ W L+ G ++D
Sbjct: 412 EGSALDKVASERATSVYLVQKVVPMLPRLLCEELCSLNPMTDKLTFSVVWKLSPEGKILD 471
Query: 617 RWIGRTVIRSCCKLSYEHAQDII---DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKS 673
W GRT+I SC KLSY+HAQ +I D KF + P + + ++I +
Sbjct: 472 EWFGRTIICSCTKLSYDHAQSMIEHPDKKFHEDE-------LPPVSTDHPIEQIHQAILN 524
Query: 674 LYEVSKILKDKRFTDGALRLENSKPVFLFDE-YGTPYDSVLSGREDLNFLFEEFMLLANK 732
L+ ++ L+ +RF DGALRL+ K F D+ G P + +D N L EEFMLLAN
Sbjct: 525 LHGIATHLRRQRFVDGALRLDQLKLAFTLDQDSGMPQGCHIYEYKDSNKLVEEFMLLANM 584
Query: 733 TAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKL 792
A I RAFP+ ALLRRHP P + L + E C + GL +D SS+G H+SL E
Sbjct: 585 AVAHQIYRAFPERALLRRHPPPQSKLLSDLEELCDQLGLAIDFSSAGALHKSLT---EMF 641
Query: 793 KDD-YVLF--DILINYATRPMQ 811
DD Y L ++L N +RPMQ
Sbjct: 642 GDDMYSLAWKEVLTNMCSRPMQ 663
>gi|297669705|ref|XP_002813047.1| PREDICTED: LOW QUALITY PROTEIN: DIS3 mitotic control homolog (S.
cerevisiae)-like 2 [Pongo abelii]
Length = 908
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 257/822 (31%), Positives = 383/822 (46%), Gaps = 124/822 (15%)
Query: 160 FAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEGD 219
F + S E V+E L++G + + R+N EA+ D+ I G+ A+NRA+ GD
Sbjct: 59 FETYMSKEDVSEGLKRGTLIQGVLRINPKKFHEAFIPSPDGDRDIFIDGVVARNRALNGD 118
Query: 220 FVLIKVDRLSLWAKMKGFSNN--SSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCT 277
V++K+ W +K SN+ + +S++P E G H KS D +
Sbjct: 119 LVVVKLLPEEQWKVVKPESNDKETEAAYESDIPEELCGHHLPQQSLKSYND------SPD 172
Query: 278 LLSEKGIHHDDDSSSEAYNQEMIEREGYNYI----------NGHHPSTSDSTEKVSSSQQ 327
++ E D Q ++ +G + +G P T D T +S +
Sbjct: 173 VIVEAQFDGSDSEDGHGITQNVLV-DGVKKLSVCVSEKGREDGDAPVTKDETTCISQDTR 231
Query: 328 NDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAK 387
+++R + +VV I+E+ R GFL + A
Sbjct: 232 ALPEKSLQR-------------SAKVVYILEKKHSR-AATGFLKLL------------AD 265
Query: 388 KNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEW 447
KN R+Y +P+ + P++ V +KD P R ++ T L RI +W
Sbjct: 266 KNSELF----RKYALFSPSDHRVPRIYVPLKDCPQDFVARPKDYANT----LFICRIVDW 317
Query: 448 NEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEEL 506
E+ F + G+ GE+EP+ IL E + S FS E L CLP +PW +P EE
Sbjct: 318 KEDCNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLECLPQGLPWTIPPEEF 377
Query: 507 LSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQ 566
R+DLR CIFTIDPSTA DLDDALS + L+DG VGVHIADVSYFV G+ LD A
Sbjct: 378 SKRRDLRKDCIFTIDPSTARDLDDALSCKPLADGNFEVGVHIADVSYFVPEGSDLDKVAA 437
Query: 567 VRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRS 626
R+TSVY++Q+ +PMLP LL EE+ SLNP D+L FS+ W L G ++D W GRT+I S
Sbjct: 438 ERATSVYLVQKVVPMLPRLLCEELCSLNPMSDKLTFSVIWTLTPEGKILDEWFGRTIICS 497
Query: 627 CCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRF 686
C KLSYEHAQ +I+ + + L P + + +V +++ +L+ ++K L+ +RF
Sbjct: 498 CTKLSYEHAQSMIENPTEKIPAKEL----PPISPEHSSEEVHQAVLNLHGIAKQLRQQRF 553
Query: 687 TDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDS 745
DGALRL+ K F D E G P + D N ++ L A V+ S
Sbjct: 554 VDGALRLDQLKLAFTLDHETGLPQGCHIYEYRDSNKXAKQKPLEPEGIA--VLDDRQRLS 611
Query: 746 ALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDIL--- 802
+ R A + + FC +T+ +FH+ + + L + + +
Sbjct: 612 MAINRLVAASRIEEHVCCLFCGCFSDSRNTAGK-RFHRQYKNTGKLLLPSGLCYKVKLPI 670
Query: 803 -----------INYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 851
++ RP+ +A YFCSG +D + HYAL P+YTHFTSP+RR+ D++
Sbjct: 671 HNGEPTPARPGLHRGQRPVVMALYFCSGLLQDPAQFRHYALNVPLYTHFTSPIRRFADVL 730
Query: 852 VHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAAL 911
VHR L AAL RE L +A
Sbjct: 731 VHRLLAAALGY----------------------------------------RERLDMA-- 748
Query: 912 KYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKK 953
D L A HCNDR++A + V++ L+ +L+K+
Sbjct: 749 ------PDTLQKQADHCNDRRMASKRVQELSTSLFFAVLVKE 784
>gi|328860922|gb|EGG10026.1| hypothetical protein MELLADRAFT_42233 [Melampsora larici-populina
98AG31]
Length = 900
Score = 345 bits (886), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 226/712 (31%), Positives = 347/712 (48%), Gaps = 75/712 (10%)
Query: 154 EARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQN 213
+ R +FAP+ ++ L + RVN NR +AY + + +D+ I G +N
Sbjct: 16 QMRKSLFAPYLPQASIPPLLAAAKLVIGVLRVNKRNRSDAYVATDALDSDIYICGSKDRN 75
Query: 214 RAVEGDFVLIK-VDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYE 272
RA+EGD V ++ +D +W K ++ N + + + K + DV E
Sbjct: 76 RALEGDVVAVELLDVDEVWGTKKE-KEEKKRKKEENQAFDPRIQQNTRREDKKRDDVEVE 134
Query: 273 YSNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGH----HPSTSDSTEKVSSSQQN 328
L E+ ++ + + + ++ER +G PS++ + EK + ++
Sbjct: 135 GQGLMLFEEEEVNDEQRPNFAGHIVAVVERMPGQLFSGTLGLLRPSSAATKEKQEAERRE 194
Query: 329 DGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKK 388
R+G+ + +GG R++ +
Sbjct: 195 ----------------------------------REGV----------DLRGGQREEQRP 210
Query: 389 NRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWN 448
+ + PT + P + + V P + +T L A I W
Sbjct: 211 ----------KIVWHRPTDKRVPLIAIPVDQAPADFLADPNKYAST----LFIAGIKRWP 256
Query: 449 EESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLS 508
S P ++ G G++E + NA+L + FS + CLP VPW +P E
Sbjct: 257 ITSLHPFGTLVEELGPIGDIEVETNALLKDCNFSSEEFSENVVRCLPPVPWTIPDREYEV 316
Query: 509 RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVR 568
R+D R+ +FTIDP TA DLDDAL + + DG VGVHIADV++FV P TALD EA+ R
Sbjct: 317 RRDFRSQTVFTIDPETAKDLDDALHVTKNEDGTFDVGVHIADVTHFVKPNTALDREARKR 376
Query: 569 STSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCC 628
+T+VY++QR +PMLP LSE++ SLNPG D+L FS+ + L S ++D W G++VI S
Sbjct: 377 ATTVYLVQRAVPMLPPSLSEQLCSLNPGQDKLTFSVVFKLTSDAKIIDTWFGKSVICSAA 436
Query: 629 KLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTD 688
KL Y AQ ++ + N E + G + + + S++ L ++S+ L+ +RF +
Sbjct: 437 KLHYSQAQTMLSDQ------NAAPELKIEKNG-VQVAQIYESVRMLGQLSRQLRKRRFEE 489
Query: 689 GALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALL 748
G LR+++ K F DE G P D +S + N L EEFMLLAN A+ +A P+ A L
Sbjct: 490 GTLRIDSIKLNFKLDEGGLPDDCQISISTEANQLVEEFMLLANIAVAKKVAAGLPEQAFL 549
Query: 749 RRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATR 808
RRH AP R+L F K G +DTSS+G +S E + + + +L AT+
Sbjct: 550 RRHEAPIDRRLEAFVKKAKKSGFDVDTSSAGSLMKSFEAIEVVGRAPHFVMQLL---ATK 606
Query: 809 PMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
M A YFC+G D W HYAL P+YTHFTSP+RR+ D++VHR L A L
Sbjct: 607 AMVKAKYFCAGAL-DIAKWSHYALNIPLYTHFTSPIRRFADIMVHRQLEAVL 657
>gi|343427099|emb|CBQ70627.1| related to SSD1 protein [Sporisorium reilianum SRZ2]
Length = 1399
Score = 345 bits (884), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 206/533 (38%), Positives = 288/533 (54%), Gaps = 25/533 (4%)
Query: 350 TGRVVSIIERSPRR--DGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPD----REYIQL 403
G VV+I+ERSP + G +G L + + + ++ +S P+ + I
Sbjct: 663 AGHVVAIVERSPGQLFSGTLGLLRPSSAATKEKQQAERVQREGASALAPEVKPRPKIIWF 722
Query: 404 TPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG 463
PT + P + + P+ EEG + L A I W S P ++ G
Sbjct: 723 RPTDKRVPLIAIPADQAPEDFWA--EEGQDSFNSRLFVACIKRWPITSLHPFGALVEEIG 780
Query: 464 RGGEVEPQINAILYEN-AICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDP 522
G VE + A+L + + F+ +L CLP +PW++P++E +RKD R+ +FTIDP
Sbjct: 781 VIGNVEAETQALLKDTLSSATEAFTEGALKCLPPLPWKIPEKEFETRKDFRSHRVFTIDP 840
Query: 523 STATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPML 582
TA DLDDA+ + RL +G VGVHIADVS+FV G++LD EA+ R TSVY++QR IPML
Sbjct: 841 ETAKDLDDAVHVVRLDNGNFEVGVHIADVSHFVKLGSSLDREARKRGTSVYLVQRAIPML 900
Query: 583 PVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
P LSEE+ SL P V+RL FS + +N VV W G+T+I+SC KL+Y AQ +I+G
Sbjct: 901 PPTLSEELCSLVPDVERLTFSAVFTMNKDAQVVSSWFGKTIIKSCAKLAYADAQKVIEG- 959
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
GE + +D+ I L+++++ ++ +RF GALR++N K F
Sbjct: 960 ---------GELPKDKIKAHQPNDIADDILILHKLAQKMRARRFDTGALRIDNVKLSFKL 1010
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
DE G P D+ + D + L EEFML AN A+ IA PD ALLRRH P R+L F
Sbjct: 1011 DENGLPTDASIYSSYDAHRLIEEFMLQANIAVAQQIAAGLPDLALLRRHEKPLDRRLEGF 1070
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
G +D SS G H+SL++ +KDD L T M A YFC+G
Sbjct: 1071 LRRAKSMGHDIDISSGGSLHRSLKE----VKDDSAR-QALQALVTNAMMKAKYFCTG-MV 1124
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPK 875
D + HYAL PVYTHFTSP+RRY DL+VHR L A L + + R + K
Sbjct: 1125 DIAKYHHYALNVPVYTHFTSPIRRYADLMVHRQLEAVLAEQDKFPVDREAMAK 1177
Score = 47.8 bits (112), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R +F + + L G + R+N NR +AY E + +D+ I+G +NRA
Sbjct: 532 RKALFGNYLPQGTLPTLLAHGKIVVGVLRINKRNRSDAYVTTEVLDSDIFISGSKDRNRA 591
Query: 216 VEGDFVLIK-VDRLSLW 231
+EGD V ++ +D L +W
Sbjct: 592 LEGDLVAVELLDPLEVW 608
>gi|331222929|ref|XP_003324138.1| hypothetical protein PGTG_06040 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309303128|gb|EFP79719.1| hypothetical protein PGTG_06040 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1421
Score = 343 bits (880), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 222/715 (31%), Positives = 357/715 (49%), Gaps = 81/715 (11%)
Query: 154 EARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQN 213
+ R +FAP+ ++ L G + RVN NR +AY + + +D+ I G +N
Sbjct: 530 QMRKSLFAPYLPQASIPPLLAAGKLVIGVLRVNKRNRSDAYVATDSLDSDIYICGSKDRN 589
Query: 214 RAVEGDFVLIKV-DRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYE 272
RA+EGD V +++ D +W K ++ N ++ ++ + K + DV E
Sbjct: 590 RALEGDVVAVELLDVDEVWGTKK-EKEEKKRKKEENQAFDSRVQQNNRREDKKRDDVEVE 648
Query: 273 YSNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGH----HPSTSDSTEKVSSSQQN 328
TL E+ ++ + + + ++ER +G PS++ + EK + ++
Sbjct: 649 GQGLTLFEEEEVNDEQRPNFAGHIVAVVERMPGQLFSGTLGLLRPSSAATKEKQEAERR- 707
Query: 329 DGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKK 388
R+G+ + +GG R++ +
Sbjct: 708 ---------------------------------EREGV----------DLRGGQREEQRP 724
Query: 389 NRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWN 448
+ + PT + P + + V P + +T L A I W
Sbjct: 725 ----------KIVWHRPTDKRVPLIAIPVDQAPADFLADPNKYSST----LFIAGIKRWP 770
Query: 449 EESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLS 508
S P ++ G G++E + NA+L + FS + CLP +PW +P+ E
Sbjct: 771 ITSLHPFGTLVEELGPIGDIEVETNALLKDCNFTSEEFSENVVKCLPPLPWTIPEREYEV 830
Query: 509 RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVR 568
R+D R+ FTID +TA DLDDAL I + DG VGVHIADV++FV PGTALD EA+ R
Sbjct: 831 RRDFRSQVAFTIDGATARDLDDALHISKNEDGTFEVGVHIADVTHFVKPGTALDREARKR 890
Query: 569 STSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCC 628
+T+VY++QR +PMLP LSE + SL+PG D+L FS + + G V+D W G+++I S
Sbjct: 891 ATTVYLVQRAVPMLPPTLSEHLCSLSPGQDKLTFSAVFKMTPQGRVIDTWFGKSIICSSA 950
Query: 629 KLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEW---SDVVRSIKSLYEVSKILKDKR 685
KL+Y+ Q ++ ++S+T P+L + E + + S+++L ++S+ ++ +R
Sbjct: 951 KLTYDSVQQVLS-----DNSST-----PELKVEKEGVTVNQICDSLRALGQLSRQMRARR 1000
Query: 686 FTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDS 745
F +G LR++N + D G P D + ++ L EEFMLLAN A+ +A P+
Sbjct: 1001 FDEGCLRIDNIRLDIKLDAEGLPEDCSVVLGDEAKQLIEEFMLLANSAVAKKVAAGLPEQ 1060
Query: 746 ALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINY 805
A+LRRH AP R+L F +K G ++DTSS+G +S++ + K + + +L
Sbjct: 1061 AMLRRHEAPIDRRLEGFAKRAAKMGFEVDTSSAGALMKSIKSMEQAGKAPHFVLQLL--- 1117
Query: 806 ATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
+T+ M A YFC G D W HYAL PVYTHFTSP+RR+ D++VHR L A L
Sbjct: 1118 STKAMVKAKYFCGGAL-DIAKWSHYALNLPVYTHFTSPIRRFADVMVHRQLEAVL 1171
>gi|71005402|ref|XP_757367.1| hypothetical protein UM01220.1 [Ustilago maydis 521]
gi|46096594|gb|EAK81827.1| hypothetical protein UM01220.1 [Ustilago maydis 521]
Length = 1423
Score = 342 bits (876), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 205/533 (38%), Positives = 289/533 (54%), Gaps = 25/533 (4%)
Query: 350 TGRVVSIIERSPRR--DGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPD----REYIQL 403
G VV+I+ERSP + G +G L + + + ++ +S P+ + I
Sbjct: 692 AGHVVAIVERSPGQLFSGTLGLLRPSSAATKEKQQAERVQREGASALAPEVKPRPKIIWF 751
Query: 404 TPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG 463
PT + P + + P+ EEG + L A I W S P ++ G
Sbjct: 752 RPTDKRVPLIAIPADQAPEDFWA--EEGQESFNSRLFVACIKRWPITSLHPFGALVEEIG 809
Query: 464 RGGEVEPQINAILYEN-AICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDP 522
G VE + A+L + + F+ +L CLP +PW++P++E +R+D R+ +FTIDP
Sbjct: 810 VIGNVEAETQALLKDTLSSATEAFTEGALKCLPPLPWKIPEKEYKTRRDFRSHRVFTIDP 869
Query: 523 STATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPML 582
TA DLDDA+ + RL +G VGVHIADVS+FV G++LD EA+ R TSVY++QR IPML
Sbjct: 870 ETAKDLDDAVHVVRLDNGNFEVGVHIADVSHFVKLGSSLDREARKRGTSVYLVQRAIPML 929
Query: 583 PVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
P LSEE+ SL P V+RLAFS + +N V+ W G+++I+SC KL+Y AQ +I+G
Sbjct: 930 PPTLSEELCSLVPNVERLAFSAVFTMNKDAQVISSWFGKSIIKSCAKLAYADAQKVIEG- 988
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
S L P+ G I L+++++ ++ +RF GALR++N K F
Sbjct: 989 -GQLSKEKLEAHRPKEIGD--------DILILHQLAQKMRARRFKTGALRIDNVKLSFKL 1039
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
DE G P D+ + D + L EEFML AN A+ IA P+ ALLRRH P R+L F
Sbjct: 1040 DENGLPTDASVYCSYDAHRLIEEFMLQANMAVAQQIAAGLPELALLRRHEKPLDRRLDGF 1099
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
G +DTSS G H+SL K+KDD L T+ M A YFC+G
Sbjct: 1100 LRRAKSMGYDIDTSSGGALHRSL----AKIKDDSAR-QALQALVTKSMMQAKYFCTG-MV 1153
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPK 875
D + HYAL P+YTHFTSP+RRY DL+VHR L A L + + R + K
Sbjct: 1154 DIAKYHHYALNVPLYTHFTSPIRRYADLMVHRQLEAVLVEQDKFGVDREAMAK 1206
Score = 47.8 bits (112), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R +F + + L G + R+N NR +AY E + +D+ I+G +NRA
Sbjct: 561 RKALFGNYLPQGTLPTLLAHGKIVVGVLRINKRNRSDAYVTTEVLDSDIFISGSKDRNRA 620
Query: 216 VEGDFVLIK-VDRLSLW 231
+EGD V ++ +D L +W
Sbjct: 621 LEGDLVAVELLDPLEVW 637
>gi|388579460|gb|EIM19783.1| RNB-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 1250
Score = 342 bits (876), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 206/612 (33%), Positives = 321/612 (52%), Gaps = 74/612 (12%)
Query: 351 GRVVSIIERSPRR--DGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDRE--------Y 400
G VV+I+ER P + G +G L + + ++DA++ +P +
Sbjct: 510 GHVVAIVERMPGQLFSGTLGILRPS---SAATKEKQDAERREREGGIPQAQEKPTQKPKI 566
Query: 401 IQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLH 460
+ PT + P + + + P ++ E+ + E+ A I W S P ++
Sbjct: 567 VWFKPTDKRVPLIAIPTEQAPKDFLEKSED----YQNEIFVACIKRWPITSLHPFGTLVE 622
Query: 461 VFGRGGEVEPQINAILYENAICCS-GFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFT 519
G G+VE + +A+L ++ C S FS L CLP +PW +P++E ++R+DLRN FT
Sbjct: 623 KLGTIGDVEVETSALLKDSNACFSEDFSENVLKCLPSLPWSIPEQEYMNRRDLRNERTFT 682
Query: 520 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 579
IDP TA DLDDA+SI+ DG + V IADVSYF+ P +ALD +A+ R+TSVY++QR +
Sbjct: 683 IDPDTAKDLDDAVSIKLNEDGTYDITVSIADVSYFIKPNSALDKDARKRATSVYLVQRAV 742
Query: 580 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDII 639
PMLP +LS ++ SL P +RLAFS+ + + V+ W GRT+I+SC +LSY++AQ++I
Sbjct: 743 PMLPSVLSSDLCSLLPDKERLAFSVTFTMTKDAKVIKTWYGRTIIKSCAQLSYQNAQNVI 802
Query: 640 DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPV 699
+GK +L +L ++ IK L+++S+ L+ +RF +GAL++++ K
Sbjct: 803 EGK-------SLDAAKEKLSDLHSSDEIEGDIKVLFDLSRKLRQRRFDNGALKIDSMKLS 855
Query: 700 FLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKL 759
F D+ G P D V + N L EEFMLL N + A IA P+ +LLRRH P RKL
Sbjct: 856 FQLDDNGVPIDCVAYQSREANNLIEEFMLLTNMSVASQIAVNLPEQSLLRRHEDPIDRKL 915
Query: 760 REFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSG 819
F+ G +D SSSG +S ++ K+ + +L A + M A YFCSG
Sbjct: 916 EGFKERAKDLGFDMDISSSGALQKSFSDIKD--KEASSMLQVL---AVKGMCRAKYFCSG 970
Query: 820 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHR 879
D + + HYAL P+YTHFTSP+RRY D++VHR L+ L+
Sbjct: 971 AI-DISAYKHYALNVPLYTHFTSPIRRYADVIVHRQLDTVLQ------------------ 1011
Query: 880 EGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVK 939
+ +DA K+G + + +A CN +K A + +
Sbjct: 1012 ------------FGEDAEN-------------KFGTGERETIAKIAQQCNIKKDASKQAQ 1046
Query: 940 DACVKLYMWILL 951
++ LY+ +L+
Sbjct: 1047 ESSQHLYLCLLI 1058
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R +FAP+ ++ L G + RVN NR +AY E + DV I G +NRA
Sbjct: 368 RKSLFAPYLPQASLPPLLTAGKLVVGMLRVNKRNRSDAYISTEVLDADVYICGSKDRNRA 427
Query: 216 VEGDFVLIKV 225
+EGD V +++
Sbjct: 428 LEGDIVAVEL 437
>gi|401889296|gb|EJT53231.1| SSD1 protein [Trichosporon asahii var. asahii CBS 2479]
Length = 1593
Score = 340 bits (873), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 231/712 (32%), Positives = 349/712 (49%), Gaps = 85/712 (11%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R +FAP+ ++ L G + RVN NR +AY + + D+ I G +NRA
Sbjct: 737 RKSLFAPYLPQASLPPLLSAGKLVVGILRVNKKNRSDAYVATDVLDADIYICGSKDRNRA 796
Query: 216 VEGDFVLIK-VDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYS 274
+EGD V ++ +D +W+ K E+S H + + K K D+ E
Sbjct: 797 LEGDIVAVELLDVDEVWSTKKDKEEKKRKKEESY----DYKPHGNKKQEKKKDDIEVEGQ 852
Query: 275 NCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGH----HPSTSDSTEKVSSSQQNDG 330
+L ++ ++ D + + ++ER +G PS++ + EK + ++
Sbjct: 853 GLSLFEDEEVNDDTKPTYAGHVVAVVERMPGQLFSGQLGVLRPSSAATKEKQEAERR--- 909
Query: 331 MNAIERLSAMISSYPTK-RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKN 389
ER + P + P ++V WF
Sbjct: 910 ----EREGDKARAAPAEPEPRPKIV--------------------WFK------------ 933
Query: 390 RSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNE 449
PT + P + + + P +E +A +L A I W
Sbjct: 934 ---------------PTDKRVPLIAIPTEQAPADF---IENPEAHAN-KLFVATIKRWPI 974
Query: 450 ESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSR 509
S P ++ G G+ E + +AIL + F+ +L CLP PW +P+ EL R
Sbjct: 975 TSLHPFGTLIEELGPIGDCEVESSAILKDCNFPTEEFADVALKCLPPQPWTIPERELEIR 1034
Query: 510 KDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRS 569
+DLR+ C FTIDPS A DLDDALSI+ DG VGVHIADVSYFV TALD +A+ R+
Sbjct: 1035 EDLRDECSFTIDPSGARDLDDALSIKTNDDGTYSVGVHIADVSYFVKVNTALDRDARKRA 1094
Query: 570 TSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCK 629
TSVY++QR +PMLP LL EE+ SL PG DRLAFS + ++ G+V+D+ RTVI+S K
Sbjct: 1095 TSVYLVQRAVPMLPPLLGEELCSLLPGQDRLAFSATFVIDKEGNVLDKQFRRTVIKSSVK 1154
Query: 630 LSYEHAQDII-DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTD 688
L+YE A II DG D E +++G + ++ ++ +L+E++ L+ KR
Sbjct: 1155 LTYEDANKIIKDGAIDAE----------KIHGHHKPEEIKANVLALHELAAKLRSKRIEG 1204
Query: 689 GALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALL 748
GA+ + + F D G P D +S + + N L EEFMLL N + A +IA P+ ALL
Sbjct: 1205 GAMLVNRPRLSFELDAEGNPIDCNVSSKTEANTLVEEFMLLTNASVAAIIANGLPEQALL 1264
Query: 749 RRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATR 808
RRH P R++ F G +D +++G QS +K+ D ++ L Y +
Sbjct: 1265 RRHEPPLERRIEAFVKRAKLLGYDIDATNAGTIQQSF----DKIDDKEAVY-CLEMYKRK 1319
Query: 809 PMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
MQ A Y+C+G D + H+AL P+Y HFTSP+RRY D++VHR L++ L
Sbjct: 1320 TMQTARYYCTG-MLDIAKYAHWALNLPLYGHFTSPIRRYADVLVHRMLDSCL 1370
>gi|340372983|ref|XP_003385023.1| PREDICTED: DIS3-like exonuclease 2-like [Amphimedon queenslandica]
Length = 803
Score = 340 bits (873), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 205/522 (39%), Positives = 288/522 (55%), Gaps = 40/522 (7%)
Query: 350 TGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPK 409
T +VV II+ S RR G+ + FN G +P +
Sbjct: 168 TAKVVYIIQASGRR-AAAGYFKI---FNKSLG------------------LALFSPRDSR 205
Query: 410 YPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVE 469
P+ VV + LP+ ++ E L RI +W PFP +L G G++
Sbjct: 206 QPRTVVPLSCLPEDYASNHKK----YEKSLFICRIKDWKITDPFPTGELLRSIGEAGDIV 261
Query: 470 PQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEELLSRKDLRNFCIFTIDPSTATD 527
P+ +IL E I F P + LP V W +PQ+EL R+D R+ C+FTIDPSTA D
Sbjct: 262 PETESILTEYDIDTDEFPPAATESLPLVNGQWTIPQDELAKRRDFRSDCVFTIDPSTARD 321
Query: 528 LDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLS 587
LDDA+ + LS+G+ +GVHIADVSYFV PGT LD A R+TSVY++Q IPMLP +L
Sbjct: 322 LDDAIHCKSLSNGVFELGVHIADVSYFVRPGTLLDKMASERATSVYLVQNVIPMLPRILC 381
Query: 588 EEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDG-KFDVE 646
EE+ SLNP DRL FS+ W L G+++D W+GR++I S KLSYE AQ +ID +F +
Sbjct: 382 EELCSLNPQQDRLTFSVVWKLTEKGELLDEWMGRSIIHSKAKLSYEDAQKMIDDPQFSWQ 441
Query: 647 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDE-Y 705
S+ +P + SD+V S+ L +++K L+ R T G+LRL+ K VF D
Sbjct: 442 HSD-----FPCIPVTEVISDIVESVNRLNKITKRLRFLRQTRGSLRLDQPKLVFNIDSGT 496
Query: 706 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAF 765
G P + ++ N + EE MLLAN A I+ FP+ ALLRRHP P + +
Sbjct: 497 GLPNGCHIYQHKESNKMIEECMLLANMAVAHKISETFPELALLRRHPPPKGKAIEHLRDQ 556
Query: 766 CSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFD----ILINYATRPMQLASYFCSGDF 821
+ G+Q + S++ +SL + K K+ + +L++ R M+LA YFC+ +
Sbjct: 557 FNLLGVQFECSTAADIQKSLNRYISKGKEGDKKLEMEKLVLVSLCCRAMELAHYFCTSVY 616
Query: 822 KDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE 863
K++ + HYAL P YTHFTSP+RRYPD++VHR L AAL E
Sbjct: 617 KEE-QFRHYALNVPRYTHFTSPIRRYPDIIVHRLLAAALGEE 657
>gi|406698992|gb|EKD02213.1| SSD1 protein [Trichosporon asahii var. asahii CBS 8904]
Length = 1780
Score = 339 bits (870), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 231/714 (32%), Positives = 350/714 (49%), Gaps = 85/714 (11%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R +FAP+ ++ L G + RVN NR +AY + + D+ I G +NRA
Sbjct: 924 RKSLFAPYLPQASLPPLLSAGKLVVGILRVNKKNRSDAYVATDVLDADIYICGSKDRNRA 983
Query: 216 VEGDFVLIK-VDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYS 274
+EGD V ++ +D +W+ K E+S H + + K K D+ E
Sbjct: 984 LEGDIVAVELLDVDEVWSTKKDKEEKKRKKEESY----DYKPHGNKKQEKKKDDIEVEGQ 1039
Query: 275 NCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGH----HPSTSDSTEKVSSSQQNDG 330
+L ++ ++ D + + ++ER +G PS++ + EK + ++
Sbjct: 1040 GLSLFEDEEVNDDTKPTYAGHVVAVVERMPGQLFSGQLGVLRPSSAATKEKQEAERR--- 1096
Query: 331 MNAIERLSAMISSYPTK-RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKN 389
ER + P + P ++V WF
Sbjct: 1097 ----EREGDKARAAPAEPEPRPKIV--------------------WFK------------ 1120
Query: 390 RSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNE 449
PT + P + + + P +E +A +L A I W
Sbjct: 1121 ---------------PTDKRVPLIAIPTEQAPADF---IENPEAHAN-KLFVATIKRWPI 1161
Query: 450 ESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSR 509
S P ++ G G+ E + +AIL + F+ +L CLP PW +P+ EL R
Sbjct: 1162 TSLHPFGTLIEELGPIGDCEVESSAILKDCNFPTEEFADVALKCLPPQPWTIPERELEIR 1221
Query: 510 KDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRS 569
+DLR+ C FTIDPS A DLDDALSI+ DG VGVHIADVSYFV TALD +A+ R+
Sbjct: 1222 EDLRDECSFTIDPSGARDLDDALSIKTNDDGTYSVGVHIADVSYFVKVNTALDRDARKRA 1281
Query: 570 TSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCK 629
TSVY++QR +PMLP LL EE+ SL PG DRLAFS + ++ G+V+D+ RTVI+S K
Sbjct: 1282 TSVYLVQRAVPMLPPLLGEELCSLLPGQDRLAFSATFVIDKEGNVLDKQFRRTVIKSSVK 1341
Query: 630 LSYEHAQDII-DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTD 688
L+YE A II DG D E +++G + ++ ++ +L+E++ L+ KR
Sbjct: 1342 LTYEDANKIIKDGAIDAE----------KIHGHHKPEEIKANVLALHELAAKLRSKRIEG 1391
Query: 689 GALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALL 748
GA+ + + F D G P D +S + + N L EEFMLL N + A +IA P+ ALL
Sbjct: 1392 GAMLVNRPRLSFELDAEGNPIDCNVSSKTEANTLVEEFMLLTNASVAAIIANGLPEQALL 1451
Query: 749 RRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATR 808
RRH P R++ F G +D +++G QS +K+ D ++ L Y +
Sbjct: 1452 RRHEPPLERRIEAFVKRAKLLGYDIDATNAGTIQQSF----DKIDDKEAVY-CLEMYKRK 1506
Query: 809 PMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEA 862
MQ A Y+C+G D + H+AL P+Y HFTSP+RRY D++VHR L++ L +
Sbjct: 1507 TMQTARYYCTG-MLDIAKYAHWALNLPLYGHFTSPIRRYADVLVHRMLDSCLSS 1559
>gi|299469802|emb|CBN76656.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 814
Score = 338 bits (866), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 241/729 (33%), Positives = 354/729 (48%), Gaps = 93/729 (12%)
Query: 169 VNEALEKGDAFKALYRVNAHNRLEAYCKIEG--VQTDVLITGIAAQNRAVEGDFVLIKVD 226
V + L G K R+NA R A+ +G + +D+ + A+NRA EGD V++++
Sbjct: 6 VEKGLRDGTLLKGKLRINARRRSTAFVTADGGVLLSDIFLESEKARNRAQEGDLVVVELA 65
Query: 227 RLSLWAKMKGFSNNSSIVEDSNLPTEANGMHS-DICKGKSKVDVSYEYSNCTLLSEKGIH 285
++ W +K SSI A + S I + + D + ++C
Sbjct: 66 PVTEWMPLKQAPARSSIA------GLAAALESISITENSAGADETKGATSCPAW------ 113
Query: 286 HDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERL--SAMISS 343
D A + + R + KV+ Q G N + L + ++++
Sbjct: 114 ---DGPEVAPPVDGLWR---------------PSPKVAGGAQ--GGNRSDNLCEAGVLAA 153
Query: 344 YPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQL 403
+P G+VV I+E + R D + + W + K + K+ Y+
Sbjct: 154 QGNLQPRGKVVFIMESAHREDHMGSLV----WSSPLKADGKLSDKD---------SYVMF 200
Query: 404 TPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG 463
PT + P M+V +LP +I M V W+ S P H + G
Sbjct: 201 HPTDRRVPHMLVARGELPSIFVDNPGAYANSIFMACVKG---TWSATSKLPWGHNVRFVG 257
Query: 464 RGGEVEPQINAILYENAICCSGFSPESLSCLPC-VP------------------WEVPQE 504
G + + A+L +N + F L L +P W++P+E
Sbjct: 258 EAGAIHAETKALLCQNGVNHGDFPRTVLRGLEAFLPPKNAEDGIDAGADIRGSRWKIPEE 317
Query: 505 ELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIE 564
E+ R+DLR IFTIDP+ A DLDDALSI L+DG +GVHIADV+YFV P + LD E
Sbjct: 318 EISKRRDLRATRIFTIDPTGARDLDDALSITPLADGTFEIGVHIADVTYFVRPNSDLDRE 377
Query: 565 AQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR--WIGRT 622
A+ R+T+VY++Q+ IPMLP LL EE+ SLNP VDRL +S W +N G +VD+ W GRT
Sbjct: 378 ARRRATTVYLVQQAIPMLPPLLCEELCSLNPQVDRLTYSCIWRMNVDGTLVDKPAWFGRT 437
Query: 623 VIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLY------GQFEWSDVVRSIKSLYE 676
VIRSCCKL Y+ AQ +I+G +S+++ P+L+ +F +V + + +
Sbjct: 438 VIRSCCKLDYQTAQYMIEGTILPDSASSTS---PELWDRNRRPTEFTCGEVCQDVLLMNS 494
Query: 677 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 736
++K + KRF GAL L K F D+ G P D D N L EE+MLLAN A+
Sbjct: 495 LAKRRRAKRFESGALSLNTPKLTFKLDDNGNPADFGSYPIRDSNRLVEEYMLLANFLVAQ 554
Query: 737 VIARAFPDSALLRRHP---APNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLK 793
+ D A LR HP +P + L+E A C G+++D +SSG SL + R +
Sbjct: 555 QMVEGADDRAFLRMHPPPISPGLNALKETLAGC---GIEIDITSSGSIQASLLRLRTQCN 611
Query: 794 DDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVH 853
D+ + + AT PMQ A Y +G W HYAL PVYTHFTSP+RRY D++VH
Sbjct: 612 DEEIA-QVCTMMATIPMQNAEYVAAGAAD---SWRHYALNIPVYTHFTSPIRRYADVMVH 667
Query: 854 RTLNAALEA 862
R L A L+
Sbjct: 668 RILTATLDG 676
>gi|321453433|gb|EFX64669.1| hypothetical protein DAPPUDRAFT_229774 [Daphnia pulex]
Length = 911
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 193/455 (42%), Positives = 267/455 (58%), Gaps = 22/455 (4%)
Query: 439 LVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVP 498
L ARID W E+ P + + G+ G++E + A+L E+ + F E LP +P
Sbjct: 344 LYLARIDSW-EDVNHPLGSLCYFIGKSGDIEAETIALLLEHEVDYGDFPQEVFDDLPSLP 402
Query: 499 WEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALS---IERLSDGISR---VGVHIADVS 552
W +P EE+ R+D R CIFTIDP+ A DLDDA+S ++ DGI+R V VHIADVS
Sbjct: 403 WSIPTEEIKKRRDFREQCIFTIDPADARDLDDAVSGRFLKMADDGITRLYRVSVHIADVS 462
Query: 553 YFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAG 612
+FV T LD A R+TS Y++ R IPMLP +L E V SLNPG DRLAFS+ W +N G
Sbjct: 463 FFVQDNTVLDGIASRRATSTYLVDRVIPMLPSVLCEHVCSLNPGEDRLAFSVEWIVNDKG 522
Query: 613 DVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIK 672
++++ W GR++IRSC KLSY+HAQ +I+ D E N P++ + +++ +I
Sbjct: 523 EILEEWFGRSIIRSCVKLSYDHAQAVIE---DREIVNC-----PEIKEPYSVAEIRETIL 574
Query: 673 SLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLAN 731
L E++ L+ KR GALR++ + F D E TP + ++ N L EEFMLLAN
Sbjct: 575 VLQELAGYLRKKRVDQGALRIDLPRLAFSMDWETRTPIGFRVYELKESNRLIEEFMLLAN 634
Query: 732 KTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREK 791
AE I FP A+LR HP P KL + G+ LD +SS +SL + +
Sbjct: 635 MRVAEKIYGVFPALAVLRSHPPPPGHKLEQLADTLQTIGIHLDVTSSATLQESLLRYGQG 694
Query: 792 LKDDYVLFDILI--NYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPD 849
D + L+ N +PM+ ASY CSG K + + HYAL+ P YTHFTSP+RRYPD
Sbjct: 695 SSDPISMGRNLVISNLLAKPMKCASYICSGVVKKEEKFRHYALSVPFYTHFTSPIRRYPD 754
Query: 850 LVVHRTLNAALEAEKL-YWKH---RRMLPKNNHRE 880
++VHR L+AALE E L +W+ +R+L N R+
Sbjct: 755 ILVHRLLDAALEQESLDHWEQSVVKRLLDNCNSRK 789
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 36/75 (48%)
Query: 148 NPSHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLIT 207
N + Q R K F +W + V E L F+ + R+N N EAY D LI
Sbjct: 8 NSTPQRPNRSKTFENYWDQKDVEEGLRNESLFEGVLRINPKNYKEAYISAPDGTEDFLIE 67
Query: 208 GIAAQNRAVEGDFVL 222
G+ +NRA+ GD V+
Sbjct: 68 GLLHRNRALNGDIVV 82
>gi|353237108|emb|CCA69089.1| related to SSD1 protein [Piriformospora indica DSM 11827]
Length = 1466
Score = 337 bits (864), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 204/527 (38%), Positives = 285/527 (54%), Gaps = 42/527 (7%)
Query: 350 TGRVVSIIERSPRR--DGIVGFLNVNQWFNY---------KGGSRKDAKKNRSSLSVPDR 398
G VV+++ER P + G +G L + + G R D R P
Sbjct: 723 AGHVVAVVERMPGQLFSGTLGLLRPSSAATKEKQEAERREREGDRGDEGAKRVPTERP-- 780
Query: 399 EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHV 458
+ + PT + P + + + P +E +A + VA I S P +
Sbjct: 781 KIVWFKPTDKRVPLIAIPTEQAPSDF---VENAEAYADRLFVAC-IKRHPISSLHPFGTL 836
Query: 459 LHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIF 518
+ G G+VE + +A+L + F+ L CLP +PW +P+ E +RKDLR+ IF
Sbjct: 837 VEELGPIGDVEVETSALLKDCNFPTEDFTENVLKCLPPLPWSIPEHEYKTRKDLRDTRIF 896
Query: 519 TIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRK 578
+IDP TA D+DDALSI + DG VGVHIADVSYFV P TALD +A+ RSTSVY++QR
Sbjct: 897 SIDPPTARDIDDALSITKNDDGTYEVGVHIADVSYFVKPNTALDRDARKRSTSVYLVQRA 956
Query: 579 IPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDI 638
+PMLP LSEE+ SL G +RLAFS+ + L V+ +W GRT+I+S KL+Y+HAQ +
Sbjct: 957 VPMLPPALSEELCSLLAGQERLAFSVIFTLTEDARVIKKWFGRTIIKSAAKLAYDHAQSV 1016
Query: 639 IDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKP 698
IDGK E T G + S + I L+++++ L+ +RF +G LR+E +K
Sbjct: 1017 IDGKGLPEVPITPGH---------DASAIAGDIALLHKLAQHLRQRRFQNGTLRIEENKL 1067
Query: 699 VFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRK 758
+F DE G D N L EEFMLLAN A+ IA P+ ALLRRH P R+
Sbjct: 1068 MFTLDENGVATDCYNYNFTAANALIEEFMLLANFAVAQQIAVNLPEQALLRRHDEPLERR 1127
Query: 759 LREFEAFCSKHGLQLDTSSSGQFHQSLE-----QAREKLKDDYVLFDILINYATRPMQLA 813
L F ++ G ++D SS+G +S + AR +L+ A + M A
Sbjct: 1128 LNAFAERAARLGYEMDISSAGALQRSFDAITNPDARRQLE----------GLAVKAMHRA 1177
Query: 814 SYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
YFC+G D + HYAL P+YTHFTSP+RRYPD++VHR L+A L
Sbjct: 1178 KYFCAG-MLDIAKYQHYALNAPLYTHFTSPIRRYPDILVHRQLDAIL 1223
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R +FAP+ ++ L G + RVN NR +AY E + D+ I G +NRA
Sbjct: 587 RKSLFAPYLPQASLPPLLAAGKLVVGILRVNKRNRSDAYVATEVLDADIYICGSKDRNRA 646
Query: 216 VEGDFV---LIKVDRLSLWA 232
+EGD V L+ VD +WA
Sbjct: 647 LEGDIVAVELLNVDE--VWA 664
>gi|449683222|ref|XP_002154285.2| PREDICTED: DIS3-like exonuclease 2-like, partial [Hydra
magnipapillata]
Length = 730
Score = 336 bits (862), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 189/466 (40%), Positives = 279/466 (59%), Gaps = 14/466 (3%)
Query: 403 LTPTHPKYPKMVVLVKDLP-DSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHV 461
+ PT +P +++ +K+ P D I + L+ E L A+I W++ + ++
Sbjct: 112 MFPTDSSFPIIMLPLKNFPKDFIDRPLD-----FEKSLFLAKITNWDQNLYYACGKLVSF 166
Query: 462 FGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV-PWEVPQEELLSRKDLRNFCIFTI 520
G G VE + AI+ +N I + F + L LP W +P EEL R DLR CIFTI
Sbjct: 167 LGESGSVEAETEAIIKKNLIYDTPFPKKCLKTLPQKNTWCIPSEELNKRSDLRKECIFTI 226
Query: 521 DPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIP 580
DPSTA DLDDALS ++++D + VGVHIADVSYFV +ALD AQ+R+TSVY+ Q+ IP
Sbjct: 227 DPSTARDLDDALSCKKIADDLYEVGVHIADVSYFVKENSALDKVAQLRATSVYLTQKVIP 286
Query: 581 MLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIID 640
MLP +LSE++ SLNPGVDRLA+S+ +++ S G +++ RTVI S KL+Y AQ +I+
Sbjct: 287 MLPSILSEDLCSLNPGVDRLAYSVIFNIKSDGTIINEKFVRTVICSQVKLTYCQAQQLIE 346
Query: 641 GKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVF 700
+ + + +P++YG F ++ S+ +L+++SK L+ +R GA+ + +F
Sbjct: 347 NQL---TDYLITNDFPKIYGGFTLENIKDSLYTLFQISKNLRKQRHNAGAISYNLPEIIF 403
Query: 701 -LFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKL 759
L +E P L +D N L EEFMLLAN + A I A P A+LRRHP PN +
Sbjct: 404 NLNEEKDKPIGLSLYKYKDSNKLIEEFMLLANMSVARKIYEAHPKKAVLRRHPPPNQIMM 463
Query: 760 REFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLF--DILINYATRPMQLASYFC 817
+ + L D S+ ++SLE+ L+++ F ++ T+P LASYFC
Sbjct: 464 EDLAKLFQLYELDFDLGSNQSINKSLEKL-SGLENELKTFLEPAIVLMLTKPFLLASYFC 522
Query: 818 SGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE 863
SG ++ D+ HY L P+YTHFTSP+RRYPD++VHR L AAL+++
Sbjct: 523 SGAVTNEQDFHHYGLNVPLYTHFTSPIRRYPDILVHRCLTAALDSK 568
>gi|169861161|ref|XP_001837215.1| SSD1 protein [Coprinopsis cinerea okayama7#130]
gi|116501937|gb|EAU84832.1| SSD1 protein [Coprinopsis cinerea okayama7#130]
Length = 1426
Score = 335 bits (860), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 200/522 (38%), Positives = 281/522 (53%), Gaps = 30/522 (5%)
Query: 350 TGRVVSIIERSPRR--DGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQ----- 402
G VV+++ER P + G +G L + + + ++ P R I+
Sbjct: 689 AGHVVAVVERMPGQLFSGTLGLLRPSSAATKEKQEAERREREGDKAEEPRRGPIERPKIV 748
Query: 403 -LTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHV 461
PT + P + + + P + E +L A I S P ++
Sbjct: 749 WFKPTDKRVPLIAIPTEQAPPDFVQNSE----AYADKLFVACIKRHPISSLHPFGTLVEE 804
Query: 462 FGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTID 521
G G++E + +A+L + FS L CLP +PW +P+ E +RKDLR IFTID
Sbjct: 805 LGPIGDIEVETSALLKDCNFPTEEFSENVLKCLPPIPWTIPEHEFKTRKDLREERIFTID 864
Query: 522 PSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPM 581
P TA DLDDALS++ DG +GVH+ADVS+FV P TALD +A+ R+TSVY++QR +PM
Sbjct: 865 PETAKDLDDALSVKANEDGTYDIGVHVADVSFFVKPNTALDRDARKRATSVYLVQRVVPM 924
Query: 582 LPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDG 641
LP LSE++ SL PG DRLAFS+ + +N V+ +W G+T++RS KLSY AQ++I+G
Sbjct: 925 LPPALSEQLCSLIPGEDRLAFSVIFTINKEAKVLKKWFGKTIVRSTAKLSYRDAQNVIEG 984
Query: 642 K-FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVF 700
K FD + G + SD+ IK L +SK L+ +RF +GAL LE+ K F
Sbjct: 985 KNFDAP-----------VGGNYNASDIEEDIKVLDSISKKLRAERFNNGALTLESLKLRF 1033
Query: 701 LFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLR 760
E G P D R D N L EEFMLLAN A+ IA P+ ALLRRH +P R++
Sbjct: 1034 TLGEDGLPTDCGEQERLDANALIEEFMLLANIAVAQQIAVHLPEQALLRRHDSPIERRMN 1093
Query: 761 EFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGD 820
F + G ++D SS+G +S D +L + + A YFC+G
Sbjct: 1094 TFLRRAERLGYKMDISSAGALMKSFNAI-----TDPTARKLLELVSFKATHRAKYFCAG- 1147
Query: 821 FKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEA 862
D +GHYAL P+YTHFTSP+RRY D++VHR L A L+
Sbjct: 1148 MLDIAKYGHYALNVPLYTHFTSPIRRYADVLVHRQLEATLQG 1189
Score = 49.7 bits (117), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R +FAP+ ++ L G + RVN NR +AY E + D+ I G +NRA
Sbjct: 554 RKSLFAPYLPQASLPPLLAAGKLVVGILRVNKRNRSDAYVSTEVLDADIYICGSKDRNRA 613
Query: 216 VEGDFVLIK-VDRLSLWA 232
+EGD V ++ +D +W
Sbjct: 614 LEGDIVAVELLDVDEVWG 631
>gi|170090966|ref|XP_001876705.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648198|gb|EDR12441.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1129
Score = 335 bits (860), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 210/558 (37%), Positives = 304/558 (54%), Gaps = 38/558 (6%)
Query: 350 TGRVVSIIERSPRR--DGIVGFLNVNQWFNY---------KGGSRKDAKKNRSSLSVPDR 398
G VV+++ER P + G +G L + + G R D + R + P
Sbjct: 383 AGHVVAVVERMPGQLFSGTLGLLRPSSAATKEKQEAERREREGDRGDEPR-RGPIERP-- 439
Query: 399 EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHV 458
+ + PT + P + + + P ++ +A ++ +L A I S P +
Sbjct: 440 KIVWFKPTDKRVPLIAIPTEQAPPDF---VQNSEAYVD-KLFVACIKRHPISSLHPFGTL 495
Query: 459 LHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIF 518
+ G G++E + +A+L + FS + CLP +PW +P ELLSRKDLR +F
Sbjct: 496 VEELGPIGDIEVETSALLKDCNFPTEDFSENVMKCLPPMPWTLPDHELLSRKDLRGERLF 555
Query: 519 TIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRK 578
T+DP+TA DLDDA+S++ + DG VG+HIADVS+FV P TALD +A+ R+TSVY++QR
Sbjct: 556 TVDPATAKDLDDAVSVKHMEDGTYEVGIHIADVSFFVKPNTALDRDARKRATSVYLVQRS 615
Query: 579 IPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDI 638
+PMLP LSE++ SL PG DRLAFS+ + +N+ V+ +W G+TVIRS KL+YE AQ++
Sbjct: 616 VPMLPPALSEQLCSLVPGQDRLAFSVIFTMNNDAKVLKKWFGKTVIRSAAKLTYEDAQNL 675
Query: 639 IDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKP 698
IDG SN G + +W + +K L ++K L+ +RF +GAL LE+
Sbjct: 676 IDG------SNV---GGIVVGPDHQWGAIQSDVKLLQSLAKKLRTQRFRNGALSLESLSL 726
Query: 699 VFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRK 758
F D+ G P D R D N++ EEFMLL N + IA P+ ALLRRH P R+
Sbjct: 727 SFKLDDNGLPVDCGQYERCDANYMIEEFMLLTNIVVGQHIAVHLPEQALLRRHDTPIERR 786
Query: 759 LREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCS 818
L F + G +DTSSSG +S + DD +L + + Q A YFC+
Sbjct: 787 LSTFTQRAERLGFNMDTSSSGALMRSFDAI-----DDPTARRLLELLSFKATQRAKYFCA 841
Query: 819 GDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE--AEKLYWKHRRMLPKN 876
G D + HYAL P+YTHFTSP+RRY D++VHR L + L+ AE + R + K
Sbjct: 842 G-MLDIAKYSHYALNTPLYTHFTSPIRRYADVLVHRQLESILQGGAEPKFTMDRDAVAKV 900
Query: 877 NHREGVRGRFLTGIFYDK 894
+ + LTG FY K
Sbjct: 901 AQQCNM---LLTGSFYSK 915
Score = 49.3 bits (116), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R +FAP+ ++ L G + RVN NR +AY E + D+ I G +NRA
Sbjct: 248 RKSLFAPYLPQASLPPLLAAGKLVVGILRVNKRNRSDAYVATEVLDADIYICGSKDRNRA 307
Query: 216 VEGDFVLIKV 225
+EGD V +++
Sbjct: 308 LEGDIVAVEL 317
>gi|393246082|gb|EJD53591.1| RNB-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 1171
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 233/713 (32%), Positives = 346/713 (48%), Gaps = 81/713 (11%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R +FAP+ ++ L G + RVN NR +AY E + D+ I G +NRA
Sbjct: 273 RKSLFAPYLPQASLPPLLAAGKLVVGILRVNKRNRSDAYVATEVLDADIYICGSKDRNRA 332
Query: 216 VEGDFVLIK-VDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYS 274
+EGD V ++ +D +W G + + K K + + Y
Sbjct: 333 LEGDIVAVELLDVDEVW-----------------------GTKKEKEEKKRKKEENSAYD 369
Query: 275 NCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAI 334
L K DD E + E E + T++V + +
Sbjct: 370 VKALAGRKNDKKKDDVEVEGQGLMLFEDE-------------EVTDEVKPQFAGHVVAVV 416
Query: 335 ERLSAMISSYPTK--RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSS 392
ER+ + S RP+ + + RR+ + G + + R+
Sbjct: 417 ERMPGQLFSGTLGLLRPSSAATKEKQEAERRE--------------REGDKSPEEPKRAP 462
Query: 393 LSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESP 452
P + + PT + P + + + P ++ +A ++ VA I S
Sbjct: 463 TERP--KIVWFKPTDKRVPLIAIPTEQAPPDF---VQNSEAYVDRLFVAC-IKRHPISSL 516
Query: 453 FPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDL 512
P ++ G G+VE + +A+L + F +L CLP +PW +P+ E RKDL
Sbjct: 517 HPFGTLVEELGPIGDVEVETSALLKDCNFPTEEFPDNALKCLPPIPWTIPEREFEVRKDL 576
Query: 513 RNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSV 572
R +FTIDP A D DDALSI+ DG VGVHIADVSYFV P TALD +A+ R+TSV
Sbjct: 577 RADRLFTIDPPEAKDYDDALSIKANDDGTYSVGVHIADVSYFVKPNTALDRDARKRATSV 636
Query: 573 YMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSY 632
Y++QR +PMLP LSE++ SL PG DRLAFS + L G V+D+W G+++I+S +L+Y
Sbjct: 637 YLVQRAVPMLPPTLSEQICSLVPGEDRLAFSFIFTLTRDGRVLDKWYGKSIIKSSARLTY 696
Query: 633 EHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALR 692
AQ +IDG+ +++S GE + + V IK+L+ ++K + ++R +G L
Sbjct: 697 RDAQVVIDGQ-PLDASKVSGEQ--------DAAAVAEDIKTLWSIAKDIHNRRKDEGYLH 747
Query: 693 LENSKPVFLFDEYGTPYDSVLSGREDLNFLFEE-------FMLLANKTAAEVIARAFPDS 745
K F D G P D + + + L EE FMLL N TAA+ IA P+
Sbjct: 748 SHRDKLKFTLDNKGLPADCEPYEQVEAHSLVEEASLASLYFMLLTNITAAQQIAVHLPEQ 807
Query: 746 ALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINY 805
ALLRRH P R+L+ F S+ G Q+DT+S+G +SLE + + LFD+L+
Sbjct: 808 ALLRRHEEPVERRLKAFSERASRMGYQIDTTSAGSIQKSLETITD--PEARRLFDLLVRK 865
Query: 806 ATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNA 858
R A Y+C+G D + HYAL P+YTHFTSP+RRY D++VHR L A
Sbjct: 866 TNRS---AKYYCAG-MLDIAKYNHYALNVPLYTHFTSPIRRYADILVHRQLEA 914
>gi|402225985|gb|EJU06045.1| RNB-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 921
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 199/523 (38%), Positives = 291/523 (55%), Gaps = 32/523 (6%)
Query: 350 TGRVVSIIERSPRR--DGIVGFLNVNQWFNY---------KGGSRKDAKKNRSSLSVPDR 398
G VV+++ER P + G +G L + + G ++ A++ RS P
Sbjct: 184 AGHVVAVVERMPGQLFSGTLGLLRPSSAATKEKQEAERREREGDKEPAEEKRSGTDRP-- 241
Query: 399 EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHV 458
+ + PT + P + + + P +E +A VA I S P +
Sbjct: 242 KIVWFKPTDKRVPLIAIPTEQAPPDF---VENSEAYANRLFVAC-IKRHPISSLHPFGTL 297
Query: 459 LHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIF 518
+ G G++E + +A+L + FS L CLP +PW +P E +R+DLR IF
Sbjct: 298 VEELGPIGDLEVETSALLKDCNFPTEDFSDNVLKCLPPLPWTIPDREYETRRDLRGDRIF 357
Query: 519 TIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRK 578
TIDPSTA DLDDA+S+ + DG V VHIADVSYFV P TALD +A+ R+TSVY++QR
Sbjct: 358 TIDPSTAKDLDDAMSVRKNEDGTYDVSVHIADVSYFVKPSTALDRDAKKRATSVYLIQRA 417
Query: 579 IPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDI 638
+PMLP LSEE+ SL PGVDRLAF+ ++++ G V+ W GRT+IRS KL+Y +AQ++
Sbjct: 418 VPMLPPALSEELCSLVPGVDRLAFTAIFNMSPQGKVIGSWFGRTIIRSAAKLAYSNAQNV 477
Query: 639 IDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKP 698
IDG + LG+ ++ + S++ IK L++++ L++ R+ G LR+ + K
Sbjct: 478 IDG-------HPLGDV--EVSPEHTASEIEEDIKILHDLATKLREARWEAGGLRIHSQKL 528
Query: 699 VFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRK 758
F D+ P D R + N L EEFMLL N + A++IA A P+ A+LRRH P R+
Sbjct: 529 HFELDDNNMPLDCEAYDRTEANSLIEEFMLLTNLSVAKMIAAALPEQAMLRRHEEPVPRR 588
Query: 759 LREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCS 818
L F ++ G+ +D SS+G +S +D +L L AT+ M A YFCS
Sbjct: 589 LERFAEQAARLGVAMDVSSAGALQKSFNAI-----EDPLLRRQLEILATKAMHRAKYFCS 643
Query: 819 GDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 861
G D + HY L P+YTHFTSP+RRY D++VHR L+ L+
Sbjct: 644 G-MLDIAKYQHYGLNAPLYTHFTSPIRRYADVLVHRQLDCVLQ 685
Score = 48.9 bits (115), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R +FAP+ ++ L G + RVN NR +AY E + D+ I G +NRA
Sbjct: 47 RKSLFAPYLPQASLPPLLGAGKLVVGILRVNKRNRSDAYVSTEVLDADIYICGSKDRNRA 106
Query: 216 VEGDFVLIKV 225
+EGD V +++
Sbjct: 107 LEGDIVAVEL 116
>gi|389747280|gb|EIM88459.1| RNB-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 1153
Score = 333 bits (853), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 229/710 (32%), Positives = 342/710 (48%), Gaps = 76/710 (10%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R +FAP+ ++ L G + RVN NR +AY E + D+ I G +NRA
Sbjct: 276 RKSLFAPYLPQASLPPLLATGKLVVGILRVNKRNRSDAYVSTEVLDADIYICGSKDRNRA 335
Query: 216 VEGDFVLIK-VDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYS 274
+EGD V ++ +D +W G + + K K + + Y
Sbjct: 336 LEGDIVAVELLDVDEVW-----------------------GTKKEKEEKKRKKEENAAYE 372
Query: 275 NCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAI 334
T + K DD E + E E + T++V + +
Sbjct: 373 TKTAANRKNDKKKDDVEVEGQALTLFEDE-------------EVTDEVKPQFAGHVVAVV 419
Query: 335 ERLSAMI--SSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSS 392
ER+ + + RP+ + + RR+ R+ K +
Sbjct: 420 ERMPGQLFSGTLGLLRPSSAATKEKQEAERRE------------------REGDKGDEPR 461
Query: 393 LSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESP 452
++ + + PT + P + + + P ++ DA + +L A I S
Sbjct: 462 RAIERPKIVWFKPTDKRVPLIAIPTEQAPPDF---VQNSDAYVN-KLFVACIKRHPISSL 517
Query: 453 FPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDL 512
P ++ G G++E + +A+L + FS + CLP +PW +P+ E+ RKDL
Sbjct: 518 HPFGTLVEELGPIGDIEVETSALLKDCNFPNEDFSESVMKCLPPMPWSIPEREVEVRKDL 577
Query: 513 RNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSV 572
R IFTIDP TA DLDDALS+ DG VG+HIADV++FV P TALD +A+ R+TSV
Sbjct: 578 RKERIFTIDPDTAKDLDDALSVSLNEDGTYDVGIHIADVTHFVKPNTALDRDARKRATSV 637
Query: 573 YMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSY 632
Y++QR + MLP LSEE+ SL PGVDRLAFS+ + V +W G+T+I+S KL+Y
Sbjct: 638 YLVQRAVSMLPPALSEELCSLVPGVDRLAFSVVLTMTKDARVTKKWFGKTIIKSAAKLTY 697
Query: 633 EHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALR 692
+AQD+I+GK LG+ + + + S + IK+L +++K L+ +RF +GAL
Sbjct: 698 NNAQDVIEGK-------PLGDVV--VIPEHDASAIEHDIKALNDLAKELRTRRFENGALA 748
Query: 693 LENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHP 752
LE+ + F G P D R D + L EEFMLL N T A+ IA P+ ALLRRH
Sbjct: 749 LESPRLTFKLGADGLPIDCSQYARFDAHELVEEFMLLTNCTVAQQIAVNLPEQALLRRHD 808
Query: 753 APNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQL 812
P R+L ++ G +D SSSG +S +D +L + +
Sbjct: 809 IPMERRLNMLAERAARLGYTMDVSSSGAIMRSFNSI-----EDPTARRLLQLLSYKATHT 863
Query: 813 ASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEA 862
A YFC+G D + HYAL P+YTHFTSP+RRY D++VHR L A L+
Sbjct: 864 AKYFCAG-MLDIAKYHHYALNVPLYTHFTSPIRRYADVLVHRQLEAVLQG 912
>gi|384496606|gb|EIE87097.1| hypothetical protein RO3G_11808 [Rhizopus delemar RA 99-880]
Length = 885
Score = 333 bits (853), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 198/521 (38%), Positives = 280/521 (53%), Gaps = 30/521 (5%)
Query: 351 GRVVSIIERSPRRDGIVG--FLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
G VV+IIER P+ G L ++ N D ++ +P R + PT
Sbjct: 214 GEVVAIIER-PKHTTYSGTIILPKSKESNETPPVEVDGDNDKQK-ELPRR--VWFKPTDK 269
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ P + + + +P I E + + L +A + W P ++ G G +
Sbjct: 270 RMPLIALFGRKVPSDIV----ENEEYYKTHLFSAEVYRWLITDSNPAGRIIKELGPVGYL 325
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDL 528
+ A++ +N+I + FSP +L LP +PW +P E +R DLR +F+IDP TA DL
Sbjct: 326 SAEKEAVIADNSIIDAEFSPVALQGLPELPWSIPAVEYRNRLDLRCERVFSIDPITAKDL 385
Query: 529 DDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSE 588
DDAL I L DG VGVHIADV+YF+ + LD EA R TS Y+ R IPMLP +L E
Sbjct: 386 DDALHIRPLRDGYLEVGVHIADVTYFLKKESPLDTEAMNRGTSTYLADRVIPMLPSVLCE 445
Query: 589 EVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESS 648
++ SLNPGVDRLAFS+ W ++ G + W GRT+I+SC KL+YEHAQ++I+G+
Sbjct: 446 QLCSLNPGVDRLAFSVLWIMDKFGKITKTWFGRTIIKSCAKLAYEHAQEVIEGR------ 499
Query: 649 NTLGEGWPQ---LYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEY 705
P+ +YG D++ I+ LY++S ++ +R G+L L + K F D
Sbjct: 500 -----NLPEDIIIYGNHNAEDILEDIRMLYDMSVHMRQRRKDGGSLSLHSVKLTFELDSN 554
Query: 706 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAF 765
G P + ++ N L EEFML AN + A+ I AFP ALLRRH P R+L F
Sbjct: 555 GDPISFDKAESKEANRLIEEFMLCANISVAQKIKEAFPSEALLRRHENPIERRLDAFLRL 614
Query: 766 CSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDT 825
GL D S++G +S D+ + +L+ R MQ A YFC+G F +
Sbjct: 615 TDVLGLNFDGSTAGTLQKSFNSV-----DNPNVKSVLLILCIRAMQRAKYFCAGAFNAEK 669
Query: 826 DWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
HYAL PVYTHFTSP+RRY D++VHR L AAL+ + Y
Sbjct: 670 HL-HYALNEPVYTHFTSPIRRYADVMVHRMLQAALDNKPTY 709
Score = 41.6 bits (96), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 142 YTNKDDNPSHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQ 201
Y + DD A +F+ S + V L G ++ ++ + NR +AY K + +
Sbjct: 77 YLHPDDRLKSDKRA---LFSAFISPKEVEAGLLDGSLYQGEMKI-SKNRQDAYVKCDELD 132
Query: 202 TDVLITGIAAQNRAVEGDFVLIK-VDRLSLWAKMK 235
+D+ I G +NR+++GD V IK +D ++W + K
Sbjct: 133 SDIYIGGHKDRNRSLQGDLVAIKLLDVETIWTQKK 167
>gi|324500855|gb|ADY40390.1| Ribonuclease [Ascaris suum]
Length = 1192
Score = 332 bits (852), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 183/477 (38%), Positives = 270/477 (56%), Gaps = 24/477 (5%)
Query: 397 DREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQA 456
+R + +P + P+M++ +P +R ++ I AA + EW + F +
Sbjct: 565 NRNWALFSPGDSRMPRMMIPADQMPAGFFERPQDFSKYI----FAAHMVEWQATAQFARG 620
Query: 457 HVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC---VPWEVPQEELLSRKDLR 513
+ G G++E + +L N + FS +LS LP V W + ++E R+D R
Sbjct: 621 KLYKSLGLAGDIEAETEGLLLANDVDTREFSAAALSSLPITEEVEWTIDEKEFKYRRDFR 680
Query: 514 NFCIFTIDPSTATDLDDALSIERLSD--GIS----RVGVHIADVSYFVLPGTALDIEAQV 567
+ TIDP TA DLDDAL I+ + D G VGVHIADVS+FV GT LD A
Sbjct: 681 EETVVTIDPLTARDLDDALHIKPIDDCDGAGTPGWEVGVHIADVSHFVQAGTELDHWATS 740
Query: 568 RSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSC 627
R+TSVY++ + IPMLP +L E++ SLNPG DRL FS+ W +N +V + W GR++IRSC
Sbjct: 741 RATSVYLVHKVIPMLPRILCEDICSLNPGKDRLTFSVVWKMNDKAEVFEEWFGRSIIRSC 800
Query: 628 CKLSYEHAQDIIDG---KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDK 684
CKL+YEHAQD ID +FD P++ + S++ + L ++++IL+ +
Sbjct: 801 CKLAYEHAQDFIDNPEKEFDKAE-------LPEILNNKKSSEIKELVLRLNKLAEILRAR 853
Query: 685 RFTDGALRLENSKPVFLFDEY-GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFP 743
R ++G L+L+ K F+ +E G P + R++ + L EEFMLLAN A I FP
Sbjct: 854 RSSEGCLQLDQPKLCFVLNETSGLPDAVAIYERKEAHKLVEEFMLLANMAVARKIEHEFP 913
Query: 744 DSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILI 803
++LLRRHP P ++ LR+ C G +D SSS SL + + + +L
Sbjct: 914 RTSLLRRHPPPKIKVLRDILERCENIGFAVDGSSSATIASSLRKYEGNDELKRTIVQVLS 973
Query: 804 NYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
+ + MQLA YFC+G K +++ HYAL+ P YTHFTSP+RRY D++VHR L+AAL
Sbjct: 974 HLLMKSMQLALYFCTGTMKSVSEYAHYALSVPYYTHFTSPIRRYADVMVHRLLSAAL 1030
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 154 EARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYC--KIEGVQTDVLITGIAA 211
+ R F P+ S++AVN L GD K RVN N E+Y + Q D+LI G+
Sbjct: 274 KTRKPYFMPYMSLDAVNRGLASGDLVKGALRVNQRNYEESYVDNPLGDDQQDILIVGVHD 333
Query: 212 QNRAVEGDFVLIKVDRLSLW 231
+NRA+ GD V+++V W
Sbjct: 334 RNRALHGDVVVVRVKERINW 353
>gi|358053914|dbj|GAA99943.1| hypothetical protein E5Q_06646 [Mixia osmundae IAM 14324]
Length = 1562
Score = 328 bits (842), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 218/621 (35%), Positives = 324/621 (52%), Gaps = 83/621 (13%)
Query: 348 RPT--GRVVSIIERSPRR--DGIVGFLNVNQWFNYKGGSRKDA-KKNRSSLSVPD----R 398
+PT G VV++I R P + G +G L + + ++DA K+ R + V D +
Sbjct: 828 KPTYAGHVVAVISRQPGQLFSGQLGLLRPSSAATKE---KQDAEKRERDGIDVRDDHRQK 884
Query: 399 EYIQL---TPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQ 455
E ++ PT + P + + V D+P+ DA L A I W S P
Sbjct: 885 EKPKICWFKPTDKRVPLVAIPVSDVPEDF---CANPDA-YSSRLFVACIKRWPITSLHPF 940
Query: 456 AHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNF 515
+++ G G++E + AIL +N + F+ L CLP VP + + E +RKD R
Sbjct: 941 GTLVNELGPIGDIETETQAILADNNVAAEPFAEVVLKCLPPVP-TISEAECDARKDYRQE 999
Query: 516 CIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYML 575
+FTIDP TA DLDDA+ I +L DG VG+HIADVS++V P TALD EA+ R+TSVY++
Sbjct: 1000 TVFTIDPITAKDLDDAVHIRQLEDGNFEVGIHIADVSHYVKPNTALDREARRRATSVYLV 1059
Query: 576 QRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHA 635
Q+ IPMLP LSE + SL D+L FS+ +L G V++ W G+TVIRSC +L+Y A
Sbjct: 1060 QKVIPMLPAALSETLCSLRANEDKLTFSVVLNLTPDGKVINTWFGKTVIRSCSQLAYSFA 1119
Query: 636 QDIIDGKF---DVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALR 692
Q++I+G+ D + SN S+V SI+ L +++ L+ +R G+LR
Sbjct: 1120 QEVIEGRPLPDDAKISNGKSR-----------SEVEESIRLLDTLAQKLRARRSDQGSLR 1168
Query: 693 LENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHP 752
++N K F D+ G+P D R N L EEFMLLAN + A +A P+ AL RRH
Sbjct: 1169 VDNIKLYFALDDRGSPVDCDAIVRRASNELIEEFMLLANTSVAIKVANGLPEQALCRRHE 1228
Query: 753 APNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQL 812
P R+L FEA GL LDTSS+G +S + ++K ++L +L+ + M+
Sbjct: 1229 GPVERRLTAFEAKVEAMGLTLDTSSAGALQRSFDAIKDKDAASHLLTQLLV---VKTMKQ 1285
Query: 813 ASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRM 872
A YFC+G D + + HYAL +YTHFTSP+RRY D++VHR L A L
Sbjct: 1286 AEYFCTG-LLDISKYLHYALNVELYTHFTSPIRRYADVLVHRQLEAVLLG---------- 1334
Query: 873 LPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRK 932
+ A +K+GV A+ + +A CN ++
Sbjct: 1335 ----------------------------------ATADIKFGVD-AEGVGQIAQQCNVKR 1359
Query: 933 LACRNVKDACVKLYMWILLKK 953
A ++ ++A LY+ +L+ +
Sbjct: 1360 SAAKSAQEASQHLYLCMLISE 1380
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 83/192 (43%), Gaps = 11/192 (5%)
Query: 149 PSHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITG 208
PSH S R +FAP+ ++ L G + RVN NR +AY EG+++D+ I G
Sbjct: 688 PSHGSSQRKSLFAPYLPQASIPPLLATGKLVIGVLRVNKRNRSDAYVTAEGLESDIYICG 747
Query: 209 IAAQNRAVEGDFV---LIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKS 265
+NRA+E D V L+ VD + K K S P A M K
Sbjct: 748 SKDRNRALESDTVAVELLDVDEVWGSKKEKEDKKRKKEEATSYDPRAAQTMRR---HEKK 804
Query: 266 KVDVSYEYSNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGH----HPSTSDSTEK 321
K DV E TL + + + + + +I R+ +G PS++ + EK
Sbjct: 805 KDDVEVEGQGLTLFEDDEVTDEHKPTYAGHVVAVISRQPGQLFSGQLGLLRPSSAATKEK 864
Query: 322 V-SSSQQNDGMN 332
+ ++ DG++
Sbjct: 865 QDAEKRERDGID 876
>gi|302696509|ref|XP_003037933.1| hypothetical protein SCHCODRAFT_71865 [Schizophyllum commune H4-8]
gi|300111630|gb|EFJ03031.1| hypothetical protein SCHCODRAFT_71865 [Schizophyllum commune H4-8]
Length = 922
Score = 328 bits (840), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 197/520 (37%), Positives = 294/520 (56%), Gaps = 27/520 (5%)
Query: 351 GRVVSIIERSPRR--DGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQ------ 402
G VV+++ER P + G +G L + + + ++ + P + I+
Sbjct: 185 GHVVAVVERMPGQLFSGTLGLLRPSSAATKEKQEAERREREGITGEEPKKGPIERPKIVW 244
Query: 403 LTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVF 462
PT + P + + + P ++ +A ++ +L A I S P ++
Sbjct: 245 FKPTDKRVPLIAIPTEQAPPDF---VQNSEAYVD-KLFVACIKRHPISSLHPFGTLVEEL 300
Query: 463 GRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDP 522
G G++E + +A+L + F+ + CLP +PW +P+ EL RKDLR IF+IDP
Sbjct: 301 GPIGDIEVETSALLKDCNFPTEDFADNVMKCLPPMPWTIPERELDLRKDLRGERIFSIDP 360
Query: 523 STATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPML 582
TA DLDDALSI+ DG +GVHIADVSYFV P TALD +A+ R+TSVY++QR +PML
Sbjct: 361 DTAKDLDDALSIKANEDGTYEIGVHIADVSYFVKPNTALDRDARKRATSVYLVQRAVPML 420
Query: 583 PVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
P LSEE+ SL PG DRLAFS+ + + V ++W G+T+IRS +LSY +AQD+I+G+
Sbjct: 421 PPTLSEELCSLVPGQDRLAFSVVFTMTKDAKVTNKWFGKTIIRSAAQLSYANAQDVIEGR 480
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
LG+ + + D+ I+ L++++K L+ +RF +GAL L++ F
Sbjct: 481 -------VLGDV--PVIPEHNAVDIEHDIRVLHDIAKELRKQRFENGALSLDSLSLSFKL 531
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
DE G P D R + N L EEFMLL N T A+ IA P+ ALLRRH P R+L F
Sbjct: 532 DETGKPIDCGQRTRVEANDLIEEFMLLTNITVAQHIAVHLPEQALLRRHDTPIDRRLNNF 591
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
+ G+Q+DT+SSG +S + ++ + L ++L AT Q A Y+C+G
Sbjct: 592 VDRAKRLGVQMDTTSSGAMMRSFDAIKDPMTRK--LLELLSFKAT---QRAKYYCAG-ML 645
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEA 862
D + HYAL P+YTHFTSP+RRY D++VHR L + L++
Sbjct: 646 DIAKYHHYALNVPLYTHFTSPIRRYADVLVHRQLESTLQS 685
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R +FAP+ ++ L G + RVN NR +AY E + D+ I G +NRA
Sbjct: 49 RKSLFAPYLPQASLPPLLAAGKLVVGILRVNKRNRSDAYVATEVLDADIYICGSKDRNRA 108
Query: 216 VEGDFVLIKV 225
+EGD V +++
Sbjct: 109 LEGDIVAVEL 118
>gi|393215496|gb|EJD00987.1| RNB-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 968
Score = 327 bits (837), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 240/802 (29%), Positives = 367/802 (45%), Gaps = 125/802 (15%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R +FAP+ ++ L G + RVN NR +AY E + D+ I G +NRA
Sbjct: 93 RKSLFAPYLPQASLPPLLAAGKLVVGILRVNKRNRSDAYVATEVLDADIYICGSKDRNRA 152
Query: 216 VEGDFVLIK-VDRLSLWAKMKGFSNNSSIVEDSNL--PTEANGMHSDICKGKSKVDVSYE 272
+EGD V ++ +D +W K E++ P A G +D K K DV E
Sbjct: 153 LEGDIVAVELLDVDEVWGTKKEKEEKKRKKEENAAYDPKSAAGRKND----KKKDDVEVE 208
Query: 273 YSNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMN 332
L ++ + T++V +
Sbjct: 209 GQGLMLFEDEEV----------------------------------TDEVKPQFAGHVVA 234
Query: 333 AIERLSAMISS--YPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNR 390
+ER+ + S RP+ + + RR+ + G R + ++ R
Sbjct: 235 VVERMPGQLFSGTLGLLRPSSAATKEKQEAERRE--------------REGDRGEEQR-R 279
Query: 391 SSLSVPDREYIQLTPTHPKYPKMVVLVKDL-PDSIKKRLEEGDATIEMELVAARIDEWNE 449
+ P + + PT + P + + + PD ++ D +L A I
Sbjct: 280 GPIERP--KIVWFKPTDKRVPLIAIPTEQAPPDFVQNSEAYAD-----KLFVACIKRHPI 332
Query: 450 ESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSR 509
S P ++ G G +E + +A+L + F+ L CLP PW +P+ E R
Sbjct: 333 SSLHPFGTLVEELGPIGNIEVETSALLKDCNFPTEDFTDNVLKCLPPTPWSIPEREYEIR 392
Query: 510 KDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRS 569
DLR +FTIDP TA D DDA+ I++ DG VGVHIADVS+FV P TALD +A+ R+
Sbjct: 393 TDLRQERVFTIDPDTAKDFDDAVHIKKNEDGTYDVGVHIADVSHFVKPNTALDRDARKRA 452
Query: 570 TSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCK 629
TSVY++QR +PMLP LSE++ SL PG +RL FS+ + + G V + +T+I+SC +
Sbjct: 453 TSVYLVQRAVPMLPPTLSEQICSLVPGQERLTFSVLFTMTEDGKVTKKRFEKTIIKSCAR 512
Query: 630 LSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDG 689
L+Y AQ+++DGK G + +F+ D+ +K L ++++ L+ KR+ G
Sbjct: 513 LTYTDAQNVLDGK---------PLGSVPVSPEFDAVDIEHDLKVLNDLARNLRKKRYEAG 563
Query: 690 ALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLR 749
L L++ F DE G P D+ R D + L EEFMLL N A+ I P+ ALLR
Sbjct: 564 TLSLDSLHLTFALDENGLPTDTSAYERTDSHKLIEEFMLLTNIAVAQQIGHHLPEQALLR 623
Query: 750 RHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRP 809
RH P R+L F+ ++ G DTSS+G F +S + + ++ L I+ A +
Sbjct: 624 RHEEPIERRLIIFKERAARLGYTFDTSSAGAFMRSFDAMED--QNARKLLQII---AYKA 678
Query: 810 MQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKH 869
M A YFC+G D + HYAL P+YTHFTSP+RRY D+VVHR L +
Sbjct: 679 MHTAKYFCAG-MLDIAKYSHYALNVPLYTHFTSPIRRYADIVVHRQLES----------- 726
Query: 870 RRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCN 929
IF + + AE+ + SVA VA CN
Sbjct: 727 --------------------IFVNNNGAEAKFSMDRDSVA-------------KVAQQCN 753
Query: 930 DRKLACRNVKDACVKLYMWILL 951
+K + + ++ LY+ +L+
Sbjct: 754 IKKESSKLAQEQSTHLYLCVLI 775
>gi|409050403|gb|EKM59880.1| hypothetical protein PHACADRAFT_250659 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1476
Score = 325 bits (834), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 196/521 (37%), Positives = 286/521 (54%), Gaps = 30/521 (5%)
Query: 350 TGRVVSIIERSPRR--DGIVGFLN-----VNQWFNYKGGSRKDAKKNRSSLSVPDREYIQ 402
G VV+++ER P + G +G L + + R+ K + + + +
Sbjct: 739 AGHVVAVVERMPGQLFSGTLGLLRPSSAATKEKQEAERREREGDKGDEPRRPIERPKIVW 798
Query: 403 LTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVF 462
PT + P + + + P + E T +L A I S P ++
Sbjct: 799 FKPTDKRVPLIAIPTEQAPPDFVQNSE----TYANKLFVACIKRHPISSLHPFGTLVEEL 854
Query: 463 GRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDP 522
G G++E + +A+L + F+ L CLP +PW +P+ E RKDLR IFTIDP
Sbjct: 855 GPIGDIEVETSALLKDCNFPTEDFTENVLKCLPPIPWTIPEREFEVRKDLRGERIFTIDP 914
Query: 523 STATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPML 582
+A DLDDA SI+ DG V VH+ADVS+FV P TALD +A+ R+TSVY++QR +PML
Sbjct: 915 DSAKDLDDAFSIKVNDDGTYDVSVHVADVSHFVKPNTALDRDARKRATSVYLIQRSVPML 974
Query: 583 PVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
P LSE++ SL PG +RLAFS+ + + VV +W GRT+++S KLSY AQ++IDGK
Sbjct: 975 PPALSEQLCSLLPGQERLAFSVIFTMTKEAKVVKKWFGRTIVKSAAKLSYGDAQNVIDGK 1034
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
+GE + + D+ IK L +++K L+++RF +GA+ E+ F+
Sbjct: 1035 -------PIGEV--PVIPEHNAGDIAHDIKVLDDLAKQLRERRFQNGAIGGESYDLKFVL 1085
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
DE G P D V R + + L EEFML N A+ IA FP+ ALLRRH P R+L F
Sbjct: 1086 DEDGMPTDCVSYERTEAHSLVEEFMLATNIAVAQQIAVHFPEQALLRRHDNPLERRLNAF 1145
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYV--LFDILINYATRPMQLASYFCSGD 820
+ G +DTSSSG +SL + D + + +IL+ +T Q A YFC+G
Sbjct: 1146 ADRAERLGYGMDTSSSGALMRSL----NAITDPAIRRIVEILLQKST---QRAKYFCAG- 1197
Query: 821 FKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 861
D +GHY+L P+YTHFTSP+RRY D++VHR L++ L+
Sbjct: 1198 MLDIAKYGHYSLNVPLYTHFTSPIRRYADVLVHRQLDSILQ 1238
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R +FAP+ ++ L G + RVN NR +AY E + D+ I G +NRA
Sbjct: 603 RKSLFAPYLPQASLPPLLAAGKLVVGILRVNKRNRSDAYVATEVLDADIYICGSKDRNRA 662
Query: 216 VEGDFVLIK-VDRLSLWA 232
+EGD V ++ +D +W
Sbjct: 663 LEGDIVAVELLDVDEVWG 680
>gi|390600976|gb|EIN10370.1| RNB-domain-containing protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 1141
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 194/525 (36%), Positives = 297/525 (56%), Gaps = 36/525 (6%)
Query: 350 TGRVVSIIERSPRR--DGIVGFLNVNQWFNY---------KGGSRKDAKKNRSSLSVPDR 398
G VV+++ER P + G +G L + + G R D + R + P
Sbjct: 405 AGHVVAVVERMPGQLFSGTLGLLRPSSAATKEKQEAERREREGDRGD--EPRRPIERP-- 460
Query: 399 EYIQLTPTHPKYPKMVVLVKDLP-DSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAH 457
+ + PT + P + + + P D ++ D +L A I S P
Sbjct: 461 KIVWFKPTDKRVPLIAIPTEQAPADFVQNSEAYAD-----KLFVACIKRHPISSLHPFGT 515
Query: 458 VLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCI 517
++ G G++E + +A+L + F+ L CLP PW +P+ EL +R+DLR+ +
Sbjct: 516 LVEELGPIGDIEVETSALLKDCNFPTEEFTENVLKCLPPTPWTIPEHELKNRRDLRDQRV 575
Query: 518 FTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 577
FTIDP TA DLDDALS++ DG +VGVHIADVSYFV P TALD +A+ R+TSVY++QR
Sbjct: 576 FTIDPDTAKDLDDALSLKANDDGTFQVGVHIADVSYFVKPNTALDRDARKRATSVYLVQR 635
Query: 578 KIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQD 637
+PMLP LSEE+ SL PG +RLAFS+ + + G VVD+W G+T I+S KL+Y Q+
Sbjct: 636 AVPMLPPALSEEMCSLKPGQERLAFSVLFTVTKDGRVVDKWFGKTAIKSAAKLAYADVQN 695
Query: 638 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 697
++DGK LG G P + + SD+ +K L +++K+LK++R +G++ L++ +
Sbjct: 696 VLDGK-------PLG-GVP-VTPEHGASDLEHDLKILQDLAKLLKERRTQNGSMSLQSIR 746
Query: 698 PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMR 757
F D+ G P D R D + L EE+ML+ N A+ +A P+ ALLRRH +P R
Sbjct: 747 LKFTLDKNGLPIDCAPYERYDAHSLVEEYMLMTNIAVAQHVAVHLPEQALLRRHDSPLER 806
Query: 758 KLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFC 817
+L+ F+ + G+++D S++G +S + +KD + + + + Q A YFC
Sbjct: 807 RLKAFQERAKEGGVEIDISTAGSIMRSF----DAIKDPVARRTLEMRF-FKCTQRAKYFC 861
Query: 818 SGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEA 862
+G D +GHYAL P+YTHFTSP+RRY D++VHR L + L++
Sbjct: 862 TG-MLDIAKYGHYALNVPLYTHFTSPIRRYADILVHRQLESILQS 905
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R +FAP+ ++ L G + RVN NR +AY E + D+ I G +NRA
Sbjct: 269 RKSLFAPYLPQASLPPLLAAGKLVVGILRVNKRNRSDAYVATEVLDADIYICGSKDRNRA 328
Query: 216 VEGDFVLIK-VDRLSLWA 232
+EGD V ++ +D +WA
Sbjct: 329 LEGDIVAVELLDVDEVWA 346
>gi|313233114|emb|CBY24226.1| unnamed protein product [Oikopleura dioica]
Length = 828
Score = 323 bits (828), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 182/462 (39%), Positives = 269/462 (58%), Gaps = 12/462 (2%)
Query: 403 LTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELV-AARIDEWNEESPFPQAHVLHV 461
P + P+M++ L + + K+++E I +++ A+I EW E + +A + +
Sbjct: 211 FVPCDNRLPRMLIAKSSLAEDMAKKIKE---IISRKIIFEAKIIEWEEGAQNARAVLTNE 267
Query: 462 FGRGGEVEPQINAILYENAICCSGFSPESLSC-LPCVPWEVPQEELLSRKDLRNFCIFTI 520
G +++ Q++AIL + +I + + LP W + E++ R+D RN C+FTI
Sbjct: 268 IGDPEDLQVQMDAILVDKSIDTRDWETFDVDDELPGKEWTITDEQVAKRRDFRNECVFTI 327
Query: 521 DPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIP 580
DP+TA DLDDAL ++RL D + VGVHIADV++FV PG +D A R TS YM R +P
Sbjct: 328 DPATARDLDDALHVKRLDDNVYEVGVHIADVAFFVKPGGKIDKVASERCTSTYMPDRVVP 387
Query: 581 MLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR-WIGRTVIRSCCKLSYEHAQDII 639
MLP L EE+ SLNP V+R +FS+ + L++ G+ ++ W GR +I+SC K SYE+AQ I
Sbjct: 388 MLPRRLCEELCSLNPLVERYSFSVVFKLDAEGNYLEEPWYGRGLIKSCVKFSYENAQHFI 447
Query: 640 DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPV 699
+ E N +P++ + + + L +SK L++KR +G +R+E K
Sbjct: 448 ENP---EEENIDESDFPEVLNGYSLETIRHCVLMLDMLSKKLREKRVANGCIRIEQPKIG 504
Query: 700 FLFDE-YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRK 758
F +DE TP R+D + + E+FMLLAN AE I R FPD A LR+HP PN K
Sbjct: 505 FTWDEATKTPNGFFPYIRKDAHMMIEDFMLLANIAVAEKIERHFPDRAFLRQHPPPNQEK 564
Query: 759 LREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCS 818
+ E KHG+ +D +SS +SLE+ + ++ V L + MQLA Y C+
Sbjct: 565 ITEVVEELRKHGINIDHTSSRDLARSLEKVTQ--ENAQVFQSALSLLTVKTMQLAKYICT 622
Query: 819 GDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
D +D D+ HYALA P+YTHFTSP+RRY DLVVHR L AA+
Sbjct: 623 NDVEDRYDYRHYALAVPLYTHFTSPIRRYADLVVHRQLAAAI 664
>gi|313223557|emb|CBY41956.1| unnamed protein product [Oikopleura dioica]
Length = 724
Score = 322 bits (826), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 183/463 (39%), Positives = 271/463 (58%), Gaps = 16/463 (3%)
Query: 403 LTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELV-AARIDEWNEESPFPQAHVLHV 461
P + P+M++ L + + K+++E I +++ A+I EW E + +A + +
Sbjct: 109 FVPCDNRLPRMLIAKSALAEDMAKKIKE---IISRKIIFEAKIIEWEEGAQNARAVLTNE 165
Query: 462 FGRGGEVEPQINAILYENAICCSGFSPESLSC-LPCVPWEVPQEELLSRKDLRNFCIFTI 520
G +++ Q++AIL + +I + + LP W + E++ R+D RN C+FTI
Sbjct: 166 IGDPEDLQVQMDAILIDKSIDTRDWETFDVDDELPGKEWTITDEQVAKRRDFRNECVFTI 225
Query: 521 DPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIP 580
DP+TA DLDDAL ++RL D + VGVHIADV++FV PG +D A R TS YM R +P
Sbjct: 226 DPATARDLDDALHVKRLDDNVYEVGVHIADVAFFVKPGGKIDKVASERCTSTYMPDRVVP 285
Query: 581 MLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR-WIGRTVIRSCCKLSYEHAQDII 639
MLP L EE+ SLNP V+R +FS+ + L++ G+ ++ W GR +I+SC K SYE+AQ I
Sbjct: 286 MLPRRLCEELCSLNPLVERYSFSVVFKLDAEGNYLEEPWYGRGLIKSCVKFSYENAQHFI 345
Query: 640 DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPV 699
+ E N +P++ + + + L +SK L++KR +G +R+E K
Sbjct: 346 ENP---EEENIDESDFPEVLNGYSLETIRHCVLMLDMLSKKLREKRVANGCIRIEQPKIG 402
Query: 700 FLFDE-YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRK 758
F +DE TP R+D + + E+FMLLAN AE I R FPD A LR+HP PN K
Sbjct: 403 FSWDEATKTPNGFFPYIRKDAHMMIEDFMLLANIAVAEKIERHFPDRAFLRQHPPPNQEK 462
Query: 759 LREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYAT-RPMQLASYFC 817
+ E KHG+ +D +SS +SLE+ ++ V F ++ T + MQLA Y C
Sbjct: 463 ITEVVEELRKHGINIDHTSSRDLARSLEKVTQE-----VFFQSALSLLTVKTMQLAKYIC 517
Query: 818 SGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
+ D +D D+ HYALA P+YTHFTSP+RRY DLVVHR L AA+
Sbjct: 518 TNDVEDRYDYRHYALAVPLYTHFTSPIRRYADLVVHRQLAAAI 560
>gi|449549781|gb|EMD40746.1| CsMn04 [Ceriporiopsis subvermispora B]
Length = 1467
Score = 319 bits (817), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 192/522 (36%), Positives = 284/522 (54%), Gaps = 35/522 (6%)
Query: 351 GRVVSIIERSPRR--DGIVGFLNVNQWFNY---------KGGSRKDAKKNRSSLSVPDRE 399
G VV+++ER P + G +G L + + G R D + R + P +
Sbjct: 733 GHVVAVVERMPGQLFSGTLGLLRPSSAATKEKQEAERREREGDRGD--EPRRQIERP--K 788
Query: 400 YIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVL 459
+ PT + P + + + P + E +L A I S P ++
Sbjct: 789 IVWFKPTDKRVPLIAIPTEQAPPDFVQNSE----AYANKLFVACIKRHPISSLHPFGTLV 844
Query: 460 HVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFT 519
G G++E + +A+L + F+ + CLP +PW +P+ E RKDLR IFT
Sbjct: 845 EELGPIGDIEVETSALLKDCNFPTEEFTENVMKCLPPIPWTIPEREFELRKDLRGERIFT 904
Query: 520 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 579
IDP TA DLDDALS++ DG VGVH+ADVSYFV P TALD +A+ R+TSVY++QR +
Sbjct: 905 IDPDTAKDLDDALSVKANEDGTYDVGVHVADVSYFVKPNTALDRDARKRATSVYLIQRAV 964
Query: 580 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDII 639
PMLP LSE++ SL PG DRLAF++ + + G V+ +W G++VIRS KLSYE+AQ ++
Sbjct: 965 PMLPPALSEQLCSLVPGEDRLAFTVIFTMTKEGKVLKKWFGKSVIRSTAKLSYENAQAVL 1024
Query: 640 DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPV 699
GK E + G+ +D+ IK L ++++L+ +RF +G ++ E+ K
Sbjct: 1025 QGK----------ELINKPVGEHNEADIANDIKILDSLAQLLRSRRFQNGCVKTESLKLS 1074
Query: 700 FLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKL 759
F D+ G P D R + + L EEFMLL N A+ IA F + ALLRRH AP R+L
Sbjct: 1075 FKLDDNGMPVDCWPHDRIEAHHLVEEFMLLTNIAVAQQIAVHFSEQALLRRHDAPIERRL 1134
Query: 760 REFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSG 819
F + G ++D SS SL+ ++ + ++L+ A+ A YFC+G
Sbjct: 1135 VAFVQRAERLGYKMDISSVATLMSSLQAVQDPTA--RRILEMLLQKAS---PRAKYFCAG 1189
Query: 820 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 861
D + HYAL P+YTHFTSP+RRY D++VHR L++ L+
Sbjct: 1190 -MLDIAKYTHYALNVPLYTHFTSPIRRYADILVHRQLDSILQ 1230
Score = 50.1 bits (118), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R +FAP+ ++ L G + RVN NR +AY E + D+ I G +NRA
Sbjct: 596 RKSLFAPYLPQASLPPLLAAGKLVVGILRVNKRNRSDAYVATEVLDADIYICGSKDRNRA 655
Query: 216 VEGDFVLIK-VDRLSLWA 232
+EGD V ++ +D +W
Sbjct: 656 LEGDIVAVELLDVDEVWG 673
>gi|336373570|gb|EGO01908.1| hypothetical protein SERLA73DRAFT_48904 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1158
Score = 318 bits (815), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 193/524 (36%), Positives = 281/524 (53%), Gaps = 33/524 (6%)
Query: 350 TGRVVSIIERSPRR--DGIVGFLNVNQWFNY---------KGGSRKDAKKNRSSLSVPDR 398
G VV+++ER P + G +G L + + G R D + R + P
Sbjct: 401 AGHVVAVVERMPGQLFSGTLGLLRPSSAATKEKQEAERREREGDRGDEPR-RGPIERP-- 457
Query: 399 EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHV 458
+ + PT + P + + + P ++ +A + +L A I S P +
Sbjct: 458 KIVWFKPTDKRVPLIAIPTEQAPPDF---VQNSEAYVN-KLFVACIKRHPISSLHPFGTL 513
Query: 459 LHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIF 518
+ G G++E + +A+L + F L CLP PW +P+ E RKD+R +F
Sbjct: 514 VEELGPIGDIEVETSALLKDCNFPTEDFGDNVLKCLPPTPWTIPEREYEVRKDMRQDLVF 573
Query: 519 TIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRK 578
T+DP +A DLDDA+S++ DG +G+HIADVSYFV P TALD +A+ R+TSVY++QR
Sbjct: 574 TVDPGSAKDLDDAMSVKANDDGTYDIGIHIADVSYFVKPNTALDRDARKRATSVYLVQRA 633
Query: 579 IPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDI 638
+PMLP LSEE SLNPG +RLAFS + + VV++W G+TVI+S K+SYE AQ +
Sbjct: 634 VPMLPPTLSEEACSLNPGQERLAFSAIFTMTKDAKVVNKWFGKTVIKSAAKISYEKAQKV 693
Query: 639 IDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKP 698
IDG + LG+ + + + + IK L ++K L+ +RF DGAL L +
Sbjct: 694 IDG-------HVLGDV--PVTPDHDAAAIEHDIKVLNSLAKQLRARRFQDGALSLSTMQL 744
Query: 699 VFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRK 758
F DE G P D D N L EEFML+ N + A+ +A P+ ALLRRH P R+
Sbjct: 745 QFKLDESGLPIDCWQHESSDANELVEEFMLMTNVSVAQRVAVHLPEQALLRRHDNPIDRR 804
Query: 759 LREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCS 818
L F + G ++DTSS G +S + L ++L + AT A YFC+
Sbjct: 805 LAAFSERAKRLGYEIDTSSPGAIMRSFQSVTNPTARR--LLELLSHKAT---HRAKYFCA 859
Query: 819 GDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEA 862
G D + HYAL P+YTHFTSP+RRY D++VHR L + L++
Sbjct: 860 G-MLDIAKYNHYALNVPLYTHFTSPIRRYADVLVHRQLESVLQS 902
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R +FAP+ ++ L G + RVN NR +AY E + D+ I G +NRA
Sbjct: 265 RKSLFAPYLPQASLPPLLAAGKLVVGILRVNKRNRSDAYVATEVLDADIYICGSKDRNRA 324
Query: 216 VEGDFVLIKV 225
+EGD V +++
Sbjct: 325 LEGDIVAVEL 334
>gi|392592802|gb|EIW82128.1| RNB-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 924
Score = 318 bits (815), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 196/523 (37%), Positives = 278/523 (53%), Gaps = 34/523 (6%)
Query: 351 GRVVSIIERSPRR--DGIVGFLNVNQWFNY---------KGGSRKDAKKNRSSLSVPDRE 399
G VV+++ER P + G +G L + + G R D + R + P +
Sbjct: 186 GHVVAVVERMPGQLFSGTLGLLRPSSAATKEKQEAERREREGDRGD--EPRRPIERP--K 241
Query: 400 YIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVL 459
+ PT + P + + + P + E +L A I S P +
Sbjct: 242 IVWFKPTDKRVPLIAIPTEQAPPDFVQNSE----AYANKLFVACIKRHPISSLHPFGTLA 297
Query: 460 HVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFT 519
G G++E + +A+L + FS + CLP PW +P+ E RKDLR IFT
Sbjct: 298 EELGPIGDIEVETSALLKDCNFPTEEFSESVMKCLPPTPWTIPEREFEVRKDLRQERIFT 357
Query: 520 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 579
IDP +A DLDDA+S++ DG +GVHIADVS+FV P TALD +A+ R+TSVY++QR +
Sbjct: 358 IDPESAKDLDDAVSVKLNDDGTYDIGVHIADVSFFVKPNTALDRDARKRATSVYLVQRAV 417
Query: 580 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDII 639
PMLP +LS EV SLN G DRLAFS + VV +W G+T+I+S KLSY+ AQ +I
Sbjct: 418 PMLPPILSGEVCSLNAGQDRLAFSAVFTTTKDAKVVKKWFGKTIIKSAAKLSYDDAQRVI 477
Query: 640 DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPV 699
DG + T + E S + IK LY+++K L+D R+ +GAL L + +
Sbjct: 478 DGHPLTDIVVT---------PEHEASAIEHDIKVLYDIAKQLRDTRYKNGALSLSSMRLQ 528
Query: 700 FLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKL 759
F D G P D R + L EEFMLL N + A+ +A P+ ALLRRH P R++
Sbjct: 529 FKLDSEGKPVDCWQQERNEAQSLIEEFMLLTNISVAQRVAVHLPEQALLRRHDTPLERRM 588
Query: 760 REFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSG 819
+ G+++DTSS+G +SLE L ++L AT Q A YFC+G
Sbjct: 589 NALADRARRLGIEIDTSSAGAMMRSLEGVNNPTARK--LLELLSFKAT---QRAKYFCAG 643
Query: 820 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEA 862
D + HYAL+ P+YTHFTSP+RRY D++VHR L + L+
Sbjct: 644 -MLDIAKYNHYALSIPLYTHFTSPIRRYADVLVHRQLESVLQG 685
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R +FAP+ ++ L G + RVN NR +AY E + D+ I G +NRA
Sbjct: 49 RKSLFAPYLPQASLPPLLAAGKLVVGILRVNKRNRSDAYVATEVLDADIYICGSKDRNRA 108
Query: 216 VEGDFVLIKV 225
+EGD V I++
Sbjct: 109 LEGDIVAIEL 118
>gi|391326101|ref|XP_003737563.1| PREDICTED: uncharacterized protein LOC100897422 [Metaseiulus
occidentalis]
Length = 1700
Score = 317 bits (813), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 199/577 (34%), Positives = 301/577 (52%), Gaps = 91/577 (15%)
Query: 403 LTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVF 462
+PT P++P+M + + P + KR + + T L A++++W+ + P+ +L +
Sbjct: 1089 FSPTDPRFPRMCIPAAECPKDLIKRPKHFEDT----LFCAQLEDWDAQEVLPKGKLLKIV 1144
Query: 463 GRGGEVEPQINAILYENAICCSGFSPESLSCLPCVP-WEVPQEELLSRKDLRNFCIFTID 521
G+ GE+E + AIL N I + L + P W++P EEL SRKD R +FTID
Sbjct: 1145 GKKGEIEAETTAILSNNGIDDDCIDDDVLRNMDVSPNWKIPAEELESRKDYRKELVFTID 1204
Query: 522 PSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPM 581
P +A DLDDALS+++++D + VG+HIADVSYFV T LD +AQ R+TSVY++QR +PM
Sbjct: 1205 PMSARDLDDALSVKKIADDLYEVGIHIADVSYFVKRNTPLDSKAQSRATSVYLVQRVVPM 1264
Query: 582 LPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDG 641
LP LL + SL+PG D+L FS+ + +NS G+V + W GRT+I SCCK+SYE AQDIID
Sbjct: 1265 LPRLLCNNLCSLHPGADKLTFSVVFKMNSQGEVFEEWFGRTIINSCCKMSYELAQDIID- 1323
Query: 642 KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFL 701
D + + T E P ++ + ++ L +++ ++ +RF +GALR++ K F
Sbjct: 1324 --DPKRTWT-PEELPPIFNGHSIGRISEALVVLQDMATHMRKRRFDEGALRIDQLKLCFQ 1380
Query: 702 FDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKL-- 759
G P + + L EEFMLLAN A I R FP A LRRH P+ R++
Sbjct: 1381 LAGNGVPQGFSVYQHTASHRLIEEFMLLANMAVARKIRREFPALAFLRRHSHPDERRINI 1440
Query: 760 --REFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYA----------- 806
+EFEA G+++D G +S++ + LK+ ++ N A
Sbjct: 1441 IAKEFEAL----GIRID----GFDAKSMQSGLDTLKNQMFKLEVAENIAESLRVSECEAR 1492
Query: 807 -----------TRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRT 855
++P A Y + + D H+ALA P+YTHFTSP+RRY DLVVHR
Sbjct: 1493 ELLLRAFAVILSKPFSPAQYVVAQG-QTPEDLRHFALAVPLYTHFTSPIRRYADLVVHRL 1551
Query: 856 LNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGV 915
L +L E RE D+ A+E
Sbjct: 1552 LAQSLGYEV--------------RES-----------DERASE----------------- 1569
Query: 916 PCADILVNVATHCNDRKLACRNVKDACVKLYMWILLK 952
L +A+ CN+RK A + + A ++L++W ++
Sbjct: 1570 -----LRKIASRCNERKRAAKCAEVASIELFVWNFVR 1601
>gi|336386389|gb|EGO27535.1| hypothetical protein SERLADRAFT_346957 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1075
Score = 317 bits (813), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 193/524 (36%), Positives = 281/524 (53%), Gaps = 33/524 (6%)
Query: 350 TGRVVSIIERSPRR--DGIVGFLNVNQWFNY---------KGGSRKDAKKNRSSLSVPDR 398
G VV+++ER P + G +G L + + G R D + R + P
Sbjct: 337 AGHVVAVVERMPGQLFSGTLGLLRPSSAATKEKQEAERREREGDRGDEPR-RGPIERP-- 393
Query: 399 EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHV 458
+ + PT + P + + + P ++ +A + +L A I S P +
Sbjct: 394 KIVWFKPTDKRVPLIAIPTEQAPPDF---VQNSEAYVN-KLFVACIKRHPISSLHPFGTL 449
Query: 459 LHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIF 518
+ G G++E + +A+L + F L CLP PW +P+ E RKD+R +F
Sbjct: 450 VEELGPIGDIEVETSALLKDCNFPTEDFGDNVLKCLPPTPWTIPEREYEVRKDMRQDLVF 509
Query: 519 TIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRK 578
T+DP +A DLDDA+S++ DG +G+HIADVSYFV P TALD +A+ R+TSVY++QR
Sbjct: 510 TVDPGSAKDLDDAMSVKANDDGTYDIGIHIADVSYFVKPNTALDRDARKRATSVYLVQRA 569
Query: 579 IPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDI 638
+PMLP LSEE SLNPG +RLAFS + + VV++W G+TVI+S K+SYE AQ +
Sbjct: 570 VPMLPPTLSEEACSLNPGQERLAFSAIFTMTKDAKVVNKWFGKTVIKSAAKISYEKAQKV 629
Query: 639 IDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKP 698
IDG + LG+ + + + + IK L ++K L+ +RF DGAL L +
Sbjct: 630 IDG-------HVLGDV--PVTPDHDAAAIEHDIKVLNSLAKQLRARRFQDGALSLSTMQL 680
Query: 699 VFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRK 758
F DE G P D D N L EEFML+ N + A+ +A P+ ALLRRH P R+
Sbjct: 681 QFKLDESGLPIDCWQHESSDANELVEEFMLMTNVSVAQRVAVHLPEQALLRRHDNPIDRR 740
Query: 759 LREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCS 818
L F + G ++DTSS G +S + L ++L + AT A YFC+
Sbjct: 741 LAAFSERAKRLGYEIDTSSPGAIMRSFQSVTNPTARR--LLELLSHKAT---HRAKYFCA 795
Query: 819 GDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEA 862
G D + HYAL P+YTHFTSP+RRY D++VHR L + L++
Sbjct: 796 G-MLDIAKYNHYALNVPLYTHFTSPIRRYADVLVHRQLESVLQS 838
Score = 49.3 bits (116), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R +FAP+ ++ L G + RVN NR +AY E + D+ I G +NRA
Sbjct: 201 RKSLFAPYLPQASLPPLLAAGKLVVGILRVNKRNRSDAYVATEVLDADIYICGSKDRNRA 260
Query: 216 VEGDFVLIKV 225
+EGD V +++
Sbjct: 261 LEGDIVAVEL 270
>gi|196011227|ref|XP_002115477.1| hypothetical protein TRIADDRAFT_10828 [Trichoplax adhaerens]
gi|190581765|gb|EDV21840.1| hypothetical protein TRIADDRAFT_10828 [Trichoplax adhaerens]
Length = 557
Score = 317 bits (812), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 180/462 (38%), Positives = 251/462 (54%), Gaps = 11/462 (2%)
Query: 403 LTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVF 462
P + P++ V + P +K EE +L I EW + F VL F
Sbjct: 4 FIPRDHRIPRIRVPLTQCPKDFQKSSEEPYP----DLFFVEIVEWKATTHFALGKVLRRF 59
Query: 463 GRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDP 522
GR GE++ + AIL E + S FS + L LP W++ +++L RKDLR+ CIFTIDP
Sbjct: 60 GREGEIDSETQAILAEYQVDTSPFSDQILKDLPS-DWQISKKQLKCRKDLRSSCIFTIDP 118
Query: 523 STATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPML 582
+TA DLDDALS E L +G VGVHIADVSYFV T +D A R+ + Y++Q+ I ML
Sbjct: 119 ATAKDLDDALSCEPLENGNFEVGVHIADVSYFVRENTPVDTLASKRTLTFYLVQKAITML 178
Query: 583 PVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
P L E SLNPG DRL FS+ W+L G +V W G++VI SCCK++Y+HAQ ++D
Sbjct: 179 PPALCENYCSLNPGEDRLTFSVVWELTPNGKIVKEWFGKSVIHSCCKMNYDHAQSVLDN- 237
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
S + +PQ+YG S +V I +L ++++ L R + GA+ L K F
Sbjct: 238 ---PSKTWTSQDFPQIYGDHTVSKIVSVILNLNKIAQELLKGRLSSGAIELNQPKQWFSL 294
Query: 703 D-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLRE 761
D + G P ++ N L +EFMLLAN + A+ I F +A LRR P+P + + +
Sbjct: 295 DSDSGYPTSCKTYEMKESNGLVKEFMLLANISVAKKILTGFTSTAFLRRQPSPCAQMISK 354
Query: 762 FEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDF 821
+C + D + SL KD + + + R M A YFCSG F
Sbjct: 355 VTNYCKNFDIHCDGDNYRSLQASLLAIGTNDKDG-IHTQAVSHIFLRAMTRAEYFCSGTF 413
Query: 822 KDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE 863
+ + HY L P+YTHFTSP+RRYPD++VHR L LE +
Sbjct: 414 ESHDSFKHYCLNIPLYTHFTSPIRRYPDIIVHRQLFNLLEGK 455
>gi|412986613|emb|CCO15039.1| ribonuclease R [Bathycoccus prasinos]
Length = 1009
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 214/565 (37%), Positives = 307/565 (54%), Gaps = 58/565 (10%)
Query: 329 DGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKK 388
DG+ IE L RP G VV IIE SP+R +VG++ V++ +++
Sbjct: 201 DGIEEIELL----------RPIGTVVKIIEPSPKRTRLVGYI-VDE--------KRNNTN 241
Query: 389 NRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARID-EW 447
+ ++ ++ +L PT + P D+ S+ + + + + + A+ ID +
Sbjct: 242 SNTNSKNKSKKSFRLKPTDSRMPTC-----DIDASLSELKDLENVPENVIVFASMIDTDG 296
Query: 448 NEESPFPQA-HVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-------CVPW 499
+ +A V + G +E I+ EN I F+ E L+CLP +
Sbjct: 297 TAKGALSRACSVERIIGPSDSIETHTAKIILENDIKDEPFTDEVLACLPKEWNDDNGIEL 356
Query: 500 EVPQEELLSRKDLR-NFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPG 558
E E+ +RKD R + TIDP TA DLDD+L R+ RV VHIADVS+FV P
Sbjct: 357 ENEDEKEPARKDFRSDIGTCTIDPETARDLDDSLFATRIDKNTIRVCVHIADVSHFVQPN 416
Query: 559 TALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDL-NSAGDVVDR 617
TALD EA +R+TS Y+ R +PMLP LLSE SLNPGVDR A S W + S G +++
Sbjct: 417 TALDEEALIRATSNYLCDRVVPMLPRLLSEIACSLNPGVDRYAMSCEWIIRESDGKILEE 476
Query: 618 WIGRTVIRSCCKLSYEHAQDIIDGKFD----------VESSNTLGEG-WPQLYGQFEWSD 666
W GR+V+RS KLSY AQ ++D FD VE GEG Q +
Sbjct: 477 WFGRSVMRSRAKLSYGDAQRMLDA-FDASMTDEAIVNVEKEKVSGEGKIEQSSKDNVLLE 535
Query: 667 VVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEE 725
VV+S++ L V+K L++ R +G++RL+ +K F D E P + + N + E+
Sbjct: 536 VVKSVRLLRSVAKTLRENRVENGSVRLDQAKIGFEIDQETKLPKRAFQYELRESNRVIED 595
Query: 726 FMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQ-LDTSSSGQFHQS 784
MLLAN+ A+ IA FP+ ALLR HP PN +K+ E F +GL D S+SG H+S
Sbjct: 596 LMLLANRRVAKRIADYFPNVALLRLHPPPNEKKMFELREFAQANGLNDFDCSTSGALHRS 655
Query: 785 LEQAREKLK--DDYV-------LFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFP 835
LE+ RE ++ D+ + +++I+ AT+PMQLA YFC+G ++ W HYALAF
Sbjct: 656 LERLRETVRRTDETMNNGGVNAIYEIINLLATKPMQLAQYFCTGQLPEEESWRHYALAFD 715
Query: 836 VYTHFTSPLRRYPDLVVHRTLNAAL 860
YTHFTSP+RRYPD++VHR L A+L
Sbjct: 716 RYTHFTSPIRRYPDILVHRLLRASL 740
>gi|341883924|gb|EGT39859.1| hypothetical protein CAEBREN_09077 [Caenorhabditis brenneri]
Length = 850
Score = 316 bits (810), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 176/431 (40%), Positives = 251/431 (58%), Gaps = 14/431 (3%)
Query: 439 LVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVP 498
L A+I+EW +S + + ++ + G GE+E + I+YE+ I FS E L+ LP
Sbjct: 261 LYTAKINEWRADSIYAEGTLIKLLGMSGEIETETERIVYEHQIDHREFSDECLASLPISS 320
Query: 499 ---WEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISR------VGVHIA 549
W++P++E R+D R +FTIDP TA DLDDAL + + D + +GVHIA
Sbjct: 321 AEDWKIPEKEFEYRRDFRQEIVFTIDPKTARDLDDALHAKHIDDCDGKGTPGVEIGVHIA 380
Query: 550 DVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLN 609
DV++F+ T LD A R S Y+ Q IPMLP +L E++ SLNPGVDRLAFS + LN
Sbjct: 381 DVTFFLKEDTELDKWASERGNSTYLSQLVIPMLPRILCEQLCSLNPGVDRLAFSTVFKLN 440
Query: 610 SAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVR 669
G++ D W GR++IRS KL+YEHAQD I+ E T E P G + ++
Sbjct: 441 YEGELKDVWFGRSIIRSRVKLAYEHAQDFIEHP---EKDFTTEELPPISDGNTPF-EIRE 496
Query: 670 SIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLL 729
L+ ++++L+ +R ++GALR+E K F DE P + +D N L EEFMLL
Sbjct: 497 KTLMLHRIAQLLRKQRESNGALRIELPKLKFALDEDKKPQGVSIYEIKDSNKLVEEFMLL 556
Query: 730 ANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAR 789
AN A+ I AFP+SALLR HP P + +++ C+K G LD +SG SL + +
Sbjct: 557 ANMEVAKKIGSAFPNSALLRNHPPPKEKMIKDVAEQCAKIGFPLDGKTSGMLSTSLRKYQ 616
Query: 790 EKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPD 849
+ D + ++ + +PMQ A YFC+ D + + HYAL YTHFTSP+RRYPD
Sbjct: 617 GNTRLDMCIRQVISSLTIKPMQQAKYFCTADMP-PSFFHHYALNVDHYTHFTSPIRRYPD 675
Query: 850 LVVHRTLNAAL 860
++VHR L A+L
Sbjct: 676 VIVHRQLAASL 686
Score = 42.7 bits (99), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 148 NPSHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYC-KIEGVQ-TDVL 205
+P++++ R KIF + S E + L+ FKA+ R+N N E + +G + DVL
Sbjct: 56 SPNNKNPPR-KIFQDYISQEETDAGLKDKTMFKAVLRINPKNYQECFLDHPKGTEYPDVL 114
Query: 206 ITGIAAQNRAVEGDFVLIKVDRLSLW 231
+ G +NRA++GD V++K+ W
Sbjct: 115 VLG-QDRNRAMQGDVVIVKMKPKEEW 139
>gi|443927066|gb|ELU45598.1| cell wall biogenesis protein phosphatase Ssd1, putative [Rhizoctonia
solani AG-1 IA]
Length = 1478
Score = 316 bits (810), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 220/708 (31%), Positives = 336/708 (47%), Gaps = 86/708 (12%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R +FAP+ ++ L G + RVN NR +AY E + D+ I G +NRA
Sbjct: 612 RKSLFAPYLPQASLPPLLAAGKLVVGILRVNKRNRSDAYVSTEVLDADIYICGSKDRNRA 671
Query: 216 VEGDFVLIK-VDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYS 274
+EGD V ++ +D +W G + + K K + + Y
Sbjct: 672 LEGDIVAVELLDVDEVW-----------------------GTKKEKEEKKRKKEENAAYD 708
Query: 275 NCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAI 334
+ K DD E + E E + T++V + +
Sbjct: 709 VRGAIGRKNDKKKDDVEVEGQGLMLFEDE-------------EVTDEVKPQFAGHVVAVV 755
Query: 335 ERLSAMISSYPTK--RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSS 392
ER+ + S RP+ + + RR+ + G R D + +
Sbjct: 756 ERMPGQLFSGTLGLLRPSSAATKEKQEAERRE--------------REGDRYDEQAAKKE 801
Query: 393 LSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESP 452
+ P + + PT + P + + + P E +L A I S
Sbjct: 802 MERP--KIVWFKPTDKRVPLIAIPTEQAPPDFVTNSE----AYADKLFVACIKRHPISSL 855
Query: 453 FPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDL 512
P ++ G G+VE + +A+L + F+ + CLP +PW +P+ E +R+D
Sbjct: 856 HPFGTLVEELGPIGDVEVETSALLKDCNFPTEEFTENVIKCLPPLPWTIPEREYETRRDF 915
Query: 513 RNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSV 572
RN +FTIDP+TA D+DDAL ++ DG +GVHI DVSYFV P TALD +A+ R+TSV
Sbjct: 916 RNERVFTIDPTTAKDMDDALHVQVNDDGTYDIGVHITDVSYFVKPNTALDRDARKRATSV 975
Query: 573 YMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSY 632
Y++QR +PMLP LSEE+ SL PG +RL FS + + V+ +W GR++I+S KLSY
Sbjct: 976 YLVQRAVPMLPPTLSEELCSLVPGKERLTFSAVFTMTQDARVIKKWFGRSIIKSAAKLSY 1035
Query: 633 EHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALR 692
AQ +IDG ++ S N + Q + + IK L+ ++K ++++R +G L
Sbjct: 1036 SEAQGVIDGG-NLASKN--------VDPQHSANAIEGDIKILHNLAKQMRERRIENGTLS 1086
Query: 693 LENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHP 752
+++ + F DE G P D + + N L EFM+LAN A+ IA P+ ALLRRH
Sbjct: 1087 IQSLRLKFDLDESGAPVDCSDELQTEANHLIAEFMILANTAVAQQIAVHLPEQALLRRHE 1146
Query: 753 APNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQL 812
P R+ L +DTSS+G +S ++ L +IL + A M
Sbjct: 1147 EPIERR------------LVIDTSSAGALQRSFNAVQDPTA--RRLLEILCSKA---MHR 1189
Query: 813 ASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
A YFC+G D + HYALA P+YTHFTSP+RRY D++VHR L + +
Sbjct: 1190 AKYFCTG-MLDIAKYSHYALAEPLYTHFTSPIRRYADILVHRQLESVI 1236
>gi|392568788|gb|EIW61962.1| RNB-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 1258
Score = 315 bits (807), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 188/520 (36%), Positives = 282/520 (54%), Gaps = 26/520 (5%)
Query: 350 TGRVVSIIERSPRR--DGIVGFLN-----VNQWFNYKGGSRKDAKKNRSSLSVPDREYIQ 402
G VV+++ER P + G +G L + + R+ K + + + +
Sbjct: 514 AGHVVAVVERMPGQLFSGTLGLLRPSSAATKEKQEAERREREGDKGDEPRRPIERPKIVW 573
Query: 403 LTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVF 462
PT + P + + + P + E T +L A I S P ++
Sbjct: 574 FKPTDKRVPLIAIPTEQAPPDFVQNSE----TYANKLFVACIKRHPISSLHPFGTLVEEL 629
Query: 463 GRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDP 522
G G++E + +A+L + FS L CLP PW +P+ E RKDLR+ +FTIDP
Sbjct: 630 GPIGDIEVETSALLKDCNFPTEDFSDNVLKCLPPTPWTIPEREFDVRKDLRSERVFTIDP 689
Query: 523 STATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPML 582
A DLDDA+S++ DG +GVHIADVSYFV P TALD +A+ R+TSVY++QR +PML
Sbjct: 690 EDAKDLDDAVSVKVNEDGTYDIGVHIADVSYFVKPNTALDRDARKRATSVYLVQRAVPML 749
Query: 583 PVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
P LSE+V SL PG +RLAFS+ + ++ VV +W G+T+I+S KLSY A +IDGK
Sbjct: 750 PPTLSEQVCSLLPGQERLAFSVIFTVSKDAKVVKKWFGKTIIKSAAKLSYNDAHGVIDGK 809
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
+LG+ + + + + + IK L +++K L+ +RF +G ++ + + F
Sbjct: 810 -------SLGDV--PIIPEHDAAGISHDIKVLDDIAKQLRARRFQNGCVKSNSLRLKFKL 860
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
DE G P D R + + L EEFMLL N A+ IA F + A+LRRH P+ R+L F
Sbjct: 861 DESGLPVDCGSYERTEAHNLIEEFMLLTNMAVAQQIAVHFSEQAMLRRHDTPSERRLGAF 920
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
+ G +D+SS G +S+E + D ++L + + A YFC+G
Sbjct: 921 AERAQRLGYTIDSSSVGTLMRSIEAVQ-----DPTARNVLELFLQKASPRAKYFCAG-ML 974
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEA 862
D +GHYAL P+Y+HFTSP+RRY D++VHR L+A L+
Sbjct: 975 DIAKYGHYALNIPLYSHFTSPIRRYADIIVHRQLDAILQG 1014
Score = 49.7 bits (117), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R +FAP+ ++ L G + RVN NR +AY E + D+ I G +NRA
Sbjct: 378 RKSLFAPYLPQASLPPLLAAGKLVVGILRVNKRNRSDAYVATEVLDADIYICGSKDRNRA 437
Query: 216 VEGDFVLIK-VDRLSLWA 232
+EGD V ++ +D +W
Sbjct: 438 LEGDIVAVELLDVDEVWG 455
>gi|326436127|gb|EGD81697.1| hypothetical protein PTSG_02410 [Salpingoeca sp. ATCC 50818]
Length = 1023
Score = 315 bits (806), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 209/593 (35%), Positives = 294/593 (49%), Gaps = 80/593 (13%)
Query: 399 EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHV 458
+Y++ P P+ P++++ P + + + AR+ W+E SP +
Sbjct: 424 KYVRFNPRDPRVPRLLIPKDKAPQDFYQNTK----AYAGKCYTARLVHWSEHSPLAIGEL 479
Query: 459 LHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVP----WEVPQEELLSRKDLRN 514
+ V G G + + +IL EN + + F+ + L+CLP V W +PQEEL R+DLR+
Sbjct: 480 VDVLGNAGAITVETESILQENGVPPAEFTEDVLACLPDVKEGDDWRIPQEELARRRDLRH 539
Query: 515 FCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYM 574
IF++DP TA DLDDALS ++L DG VGVHIADVS+F+ G+ALD EA+ R+TS YM
Sbjct: 540 ERIFSVDPLTARDLDDALSCKKLDDGSFEVGVHIADVSFFIERGSALDKEAKRRATSTYM 599
Query: 575 LQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEH 634
+ PMLP LL E + SL VDRLA+S+ W L++ G+ +D+W+GRTVIRSC KL+YEH
Sbjct: 600 VHGVYPMLPRLLCENLCSLVADVDRLAYSVIWRLDADGNKLDQWMGRTVIRSCGKLAYEH 659
Query: 635 AQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLE 694
AQ +I+ ES GE +P + V R I L ++K ++ +RF GAL L
Sbjct: 660 AQAVIED----ESVQWTGEDFPPISAPHTIDSVKRDIVHLDRLAKAMRRRRFAGGALSLN 715
Query: 695 NSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPA 753
K D + P + D N + E+FMLLAN + A+VI+ +P ALLRRHP
Sbjct: 716 KGKVGIRVDPDTQEPVEVYPYEIRDANRMIEDFMLLANMSVAQVISDTYPQCALLRRHPP 775
Query: 754 PNMRKLR---------EFEAFCSKHGLQLDTSSSGQ-FHQSLEQAREKLKDDYVLFDILI 803
P +L L T Q HQ Q + L
Sbjct: 776 PLQARLHTVRVVLCCVVLCCVTVLLASHLTTHLPNQPNHQPCTQP------SLLQVHALA 829
Query: 804 NYATRPMQLASYFCSGDFK-DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEA 862
R MQLA YF +G + +W HYAL PVYTHFTSP+RRY D++VHR L +AL
Sbjct: 830 AMLARAMQLAEYFSTGSEELTRQEWRHYALNAPVYTHFTSPIRRYADVIVHRLLTSALNG 889
Query: 863 EKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILV 922
D D YG P D
Sbjct: 890 ------------------------------DIDP---------------HYGHPQVD--- 901
Query: 923 NVATHCNDRKLACRNVKDACVKLYMWILLKKK-EVLFSCLILYLTSFST-IHV 973
++A CN RKLA + +++ V LY L V+ +++ + S+S +HV
Sbjct: 902 DIADTCNVRKLAAKRAQESSVSLYTSAYLAAHGPVVAQAVVIEVMSYSVKLHV 954
>gi|403414903|emb|CCM01603.1| predicted protein [Fibroporia radiculosa]
Length = 1469
Score = 314 bits (804), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 191/527 (36%), Positives = 284/527 (53%), Gaps = 41/527 (7%)
Query: 350 TGRVVSIIERSPRR--DGIVGFLNVNQWFNY---------KGGSRKDAKKNRSSLSVPDR 398
G VV+++ER P + G +G L + + G R D + R + P
Sbjct: 734 AGHVVAVVERMPGQLFSGTLGLLRPSSAATKEKQEAERREREGDRGD--EPRRPIERP-- 789
Query: 399 EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHV 458
+ + PT + P + + + P ++ DA +L A I S P +
Sbjct: 790 KIVWFKPTDKRVPLIAIPTEQAPQDF---VQNSDAYAN-KLFVACIKRHPISSLHPFGTL 845
Query: 459 LHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIF 518
+ G G++E + +A+L + F+ L CLP +PW +P EL RKDLRN F
Sbjct: 846 VEELGPIGDIEVETSALLKDCNFPTEDFTENVLKCLPPIPWSIPDHELQVRKDLRNERAF 905
Query: 519 TIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRK 578
TIDP TA DLDDALS++ DG V VH+ADVSYFV P TALD +A+ R+TSVY++QR
Sbjct: 906 TIDPDTAKDLDDALSVKVNDDGTYDVAVHVADVSYFVKPNTALDRDARKRATSVYLVQRA 965
Query: 579 IPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDI 638
+PMLP LSE++ SL PG +RLAFS+ + + G V+ +W G+T+I++ KLSY AQ I
Sbjct: 966 VPMLPPALSEQMCSLVPGEERLAFSVIFTMTKDGKVLKKWFGKTLIKTSAKLSYTDAQSI 1025
Query: 639 IDG---KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLEN 695
IDG +F+V + + +DV + ++ ++E++K ++ +RF G ++ ++
Sbjct: 1026 IDGHAVEFEVAPEHAV-------------ADVSKDVRVIHELAKQVRARRFQIGCIKSQS 1072
Query: 696 SKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPN 755
K F D+ G P D R + + L EEFMLL N A+ IA F + ALLRRH P
Sbjct: 1073 LKLTFKLDDDGVPIDCSQYERTEAHHLVEEFMLLTNVAVAQQIAVNFSEQALLRRHDPPI 1132
Query: 756 MRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASY 815
R+L F + G ++D SS +SL+ +D IL + + A Y
Sbjct: 1133 ERRLAAFVERAERMGFKVDASSPITLMKSLDAV-----NDPSARKILELFLRKASSAAKY 1187
Query: 816 FCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEA 862
FC+G D +GH+AL P+YTHFTSP+RRY D++VHR L++ L+
Sbjct: 1188 FCAG-MLDIAKYGHFALNIPLYTHFTSPIRRYADILVHRQLDSILQG 1233
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R +FAP+ ++ L G + RVN NR +AY E + D+ I G +NRA
Sbjct: 598 RKSLFAPYLPQASLPPLLAAGKLVVGILRVNKRNRSDAYVATEVLDADIYICGSKDRNRA 657
Query: 216 VEGDFVLIK-VDRLSLWA 232
+EGD V ++ +D +W
Sbjct: 658 LEGDIVAVELLDVDEVWG 675
>gi|357628384|gb|EHJ77732.1| putative exosome complex exonuclease RRP44 [Danaus plexippus]
Length = 963
Score = 311 bits (798), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 190/521 (36%), Positives = 290/521 (55%), Gaps = 35/521 (6%)
Query: 346 TKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTP 405
+K+ GRVV I E+ R I G+L + D + R+ L VP R+Y
Sbjct: 338 SKQRKGRVVFIKEKVHTRKCI-GYLKL----------MPDKNRQRA-LFVP-RDY----- 379
Query: 406 THPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ P++ + PD+ + E L A I +W + F ++ G+
Sbjct: 380 ---RIPRLNIPFTSWPDNFYHE----SKSYENTLFLASIFDWFDVR-FALGKLICNIGQS 431
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
G+++ + AIL + + + F + P + + +P+EE+ SR+D R+ CIF+IDP
Sbjct: 432 GDMQTETKAILAQMDLDITPFGEDVRHLFPRLDFIIPEEEIRSREDCRHLCIFSIDPINT 491
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
D+DDA+S +L++G +GVHI+DVSYF+ GT LD + ++T++YM++R MLP
Sbjct: 492 RDIDDAVSCRKLANGNYEIGVHISDVSYFLHEGTLLDEKVSEKATTIYMVERAYHMLPDE 551
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
L + SL PG+D+LAFS+FW++ G V++ RTVI SCC+L+Y+HAQ ++D K D
Sbjct: 552 LC-MLCSLFPGIDKLAFSVFWEITDDGIVLNHRFSRTVIHSCCQLAYDHAQAVLDEKEDA 610
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVF-LFDE 704
E S +P++Y F + D+ +IK L ++S I + +RF +GALR++ K F L
Sbjct: 611 EKS------FPEIYNGFTYKDISETIKVLGKISAIFRRRRFDNGALRIDQPKIAFHLSAA 664
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
G P + + + L EEFMLLAN T A+ I P A LR HPAP+ L++ E
Sbjct: 665 NGLPDSYWIYESRESHQLIEEFMLLANMTVAKRIHDDHPKLAFLRCHPAPSNYLLKQLEK 724
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 824
G+ +D SS+G H+SL ++ D +L T+PM A YFC+ DD
Sbjct: 725 SLKPLGIDIDISSAGNLHRSLTDYLDQNSLDKGKAMVLSMLCTKPMTRAKYFCAASCVDD 784
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 865
D+ HYAL P+YTHFTSP+RRY D++VHR L+A+L K+
Sbjct: 785 -DFHHYALNVPLYTHFTSPIRRYADIMVHRLLSASLNYSKV 824
>gi|409079735|gb|EKM80096.1| hypothetical protein AGABI1DRAFT_113317 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1257
Score = 311 bits (796), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 188/520 (36%), Positives = 285/520 (54%), Gaps = 27/520 (5%)
Query: 351 GRVVSIIERSPRR--DGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQ------ 402
G VV+++ER P + G +G L + + + ++ P R I+
Sbjct: 522 GHVVAVVERMPGQLFSGTLGLLRPSSAATKEKQEAERREREGDRAEEPRRGPIERPKIVW 581
Query: 403 LTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVF 462
PT + P + + + P ++ DA VA I S P ++
Sbjct: 582 FKPTDKRVPLIAIPTEQAPPDF---VQNSDAYANRLFVAC-IKRHPISSLHPFGTLVEEL 637
Query: 463 GRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDP 522
G G++E + +A+L + FS L C+P VPW +P+ E R+DLR+ I T+DP
Sbjct: 638 GPIGDIEVETSALLKDCNFPTEEFSDNVLKCIPPVPWAIPEHEFKGRQDLRDQRIITLDP 697
Query: 523 STATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPML 582
A DLDDALS++ DG VGVHIADVSYFV P TALD +A+ R+TSVY++QR +PML
Sbjct: 698 EDAKDLDDALSVKVNDDGTYDVGVHIADVSYFVKPNTALDRDARKRATSVYLVQRAVPML 757
Query: 583 PVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
P +L E++ SL PG +RL FS+ + + V+ +W G+TVI+S ++SY AQ+++DGK
Sbjct: 758 PPMLCEQLCSLLPGQERLTFSVVYTMTKDAKVLKKWFGKTVIKSAGRISYREAQNVLDGK 817
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
+ +++T+ E + D+ R I L+++++ L+ +R +GAL +++ + F
Sbjct: 818 -PLSTASTIPE--------HDTQDIRRDIMVLFDLARQLRLERMRNGALIVDSMRLKFQL 868
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
D+ G P D + D N L EEFMLL N + A+ +A P+ LLRRH +P R+L F
Sbjct: 869 DDNGLPTDCREYDKYDSNTLVEEFMLLTNLSVAQHVAVHLPEQTLLRRHDSPLERRLINF 928
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
+ G Q+DTSS+ +SL+ + L +L AT Q A YFC+G
Sbjct: 929 VKRAERLGFQIDTSSASALMKSLDTITDPTARK--LLQLLCYKAT---QRAKYFCAG-ML 982
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEA 862
D + HYAL P+YTHFTSP+RRY D++VHR L+A L+
Sbjct: 983 DIAKYQHYALNQPLYTHFTSPIRRYADILVHRQLDAVLQG 1022
Score = 49.7 bits (117), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R +FAP+ ++ L G + RVN NR +AY E + D+ I G +NRA
Sbjct: 387 RKSLFAPYLPQASLPPLLAAGKLVVGILRVNKRNRSDAYVATEVLDADIYICGSKDRNRA 446
Query: 216 VEGDFVLIK-VDRLSLWA 232
+EGD V ++ +D +W
Sbjct: 447 LEGDIVAVELLDVDEVWG 464
>gi|241177336|ref|XP_002399952.1| salivary protein Is3, putative [Ixodes scapularis]
gi|215495230|gb|EEC04871.1| salivary protein Is3, putative [Ixodes scapularis]
Length = 795
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 196/572 (34%), Positives = 292/572 (51%), Gaps = 90/572 (15%)
Query: 400 YIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVL 459
++ +P ++P+M++ P +R A L A + +W +S F Q +
Sbjct: 172 WLLFSPKDSRFPRMLIPSAQAPPGFFER----PADFSQTLFLAEMTKWLPDSTFAQGQLR 227
Query: 460 HVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFT 519
+ G+ G++E + AIL + F P+ L+ L W+VP+EEL R+D R+ +FT
Sbjct: 228 RLLGQAGDLEVETEAILESYEVDHGEFPPDILAHLD-QSWKVPEEELSRRRDFRSELVFT 286
Query: 520 IDPSTATDLDDALSIERLSDG-ISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRK 578
+DP TA DLDDALS L DG + VGVHIADVS FVLPGT LD A R+TSVY++Q+
Sbjct: 287 VDPKTARDLDDALSCRPLDDGTLWEVGVHIADVSNFVLPGTKLDQVALRRATSVYLVQQV 346
Query: 579 IPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDI 638
+PMLP LL +++ SL+PG D+L FS+ W + G V+D W GR+VIRSC KLSYEHAQD+
Sbjct: 347 VPMLPRLLCDQLCSLHPGEDKLTFSVVWTMTRDGRVLDEWFGRSVIRSCAKLSYEHAQDL 406
Query: 639 IDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKP 698
+D D + + GE P+L+G W+ V +++ L ++++ ++ +RF GALRL+ +
Sbjct: 407 MD---DPDRGHPEGE-LPELHGAHTWAQVAQALAVLGDMTRAMRSRRFDGGALRLDQVRV 462
Query: 699 VFLFDEYGTP-----YDSVLS-----GREDLNFLFEE-----FMLLANKTAAEVIARAFP 743
F ++ P Y+ S GR L + E F L T I
Sbjct: 463 AFSLNQDFQPVGFSVYEHTESHRWEEGRRGLKEITERSTKQTFCFLGGLTEVISIRTELV 522
Query: 744 DSAL--LRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDI 801
SA+ HPA + + S+ G F SL Q + + ++
Sbjct: 523 HSAISAAAYHPALSA---------------PVPVSAFGTFLLSLNQLLGSDEASHARLNV 567
Query: 802 LINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 861
L N +RPM++A+YFC+G D + HYAL P+YTHFTSP+RRY D++VHR L AAL
Sbjct: 568 LTNLLSRPMKMATYFCAGRRDDPDTFWHYALNVPLYTHFTSPIRRYADIMVHRLLGAALG 627
Query: 862 AEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADIL 921
Y + R PK L
Sbjct: 628 ----YSEPLRQSPKE--------------------------------------------L 639
Query: 922 VNVATHCNDRKLACRNVKDACVKLYMWILLKK 953
+A HCND+K RNV+D ++L++++ +++
Sbjct: 640 QGIAEHCNDKKFKARNVQDLSIELFLYVFIQQ 671
>gi|405121797|gb|AFR96565.1| SSD1 protein [Cryptococcus neoformans var. grubii H99]
Length = 1625
Score = 309 bits (792), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 184/524 (35%), Positives = 288/524 (54%), Gaps = 27/524 (5%)
Query: 348 RPT--GRVVSIIERSPRR--DGIVGFLNVNQWFNYKGGS--RKDAKKNRSSLSVPDR--E 399
+PT G VV+++ER P + G +G L + + R++ + +++ P+ +
Sbjct: 949 KPTYAGHVVAVVERMPGQLFSGQLGVLRPSSAATKEKQELERREREGDKARKEEPEARPK 1008
Query: 400 YIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVL 459
+ PT + P + + + P ++ DA +L A I W S P ++
Sbjct: 1009 IVWFKPTDKRVPLIAIPTEQAPADF---IDNPDA-YSNKLFVATIKRWPITSLHPFGTLV 1064
Query: 460 HVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFT 519
G G E + +A+L + FS ++ CLP +PW VP+ E R DLR +FT
Sbjct: 1065 EELGAIGNSEVETSALLKDCNFPTEEFSEMTMKCLPPMPWSVPEREYDVRTDLREERVFT 1124
Query: 520 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 579
IDP + DLDDALS + DG VGVHIADVS+FV T LD EA+ R+TSVY++QR +
Sbjct: 1125 IDPPHSKDLDDALSFKDNKDGTFTVGVHIADVSFFVKTNTQLDREARKRATSVYLVQRVV 1184
Query: 580 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDII 639
PM P LLSE++ SL P +RL FS + ++ G+V+ + +T+++SC KL+Y+ A ++
Sbjct: 1185 PMFPPLLSEDLCSLIPDYERLTFSAIFTVDEEGNVLQKKFAKTIVKSCAKLTYDDALTVV 1244
Query: 640 DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPV 699
G S + G +D+ R IKSL+ ++ ++ +R +GA+ + +SK
Sbjct: 1245 KGGALPRSKTS---------GTHLATDIERDIKSLHSIANKMRARRIENGAMVVSSSKVS 1295
Query: 700 FLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKL 759
F FD G P D + + + + EEFMLL N++AA +IA A P+ ALLRRH AP+ R+L
Sbjct: 1296 FEFDAQGRPVDCRTYQKGEESAIVEEFMLLTNQSAARIIANALPEQALLRRHEAPSERRL 1355
Query: 760 REFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSG 819
F A +K G +D +S+G +S + + D + D+L +Q A YFC+G
Sbjct: 1356 ESFVARATKLGFDMDATSAGTLQKSFDNVLD--NDSALCIDLLRKKV---IQRARYFCAG 1410
Query: 820 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE 863
D + H+ L P+YTHFTSP+RRY D++VHR ++A L ++
Sbjct: 1411 -MLDIAKYAHWGLNTPLYTHFTSPIRRYADVLVHRMVDACLTSQ 1453
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 77/179 (43%), Gaps = 15/179 (8%)
Query: 152 QSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAA 211
Q R +FAP+ ++ L+ G + RVN NR +AY + + D+ I G
Sbjct: 813 QGPQRKSLFAPYLPQASLPPLLQAGKLVVGVLRVNKKNRSDAYVATDVLDADIYICGSKD 872
Query: 212 QNRAVEGDFVLIK-VDRLSLWAKMKGFSNNSSIVEDSNL----PTEANGMHSDICKGKSK 266
+NRA+EGD V ++ +D +W+ K E++ P+ + K K
Sbjct: 873 RNRALEGDIVAVELLDVDEVWSTKKDKEEKKRKKEENATYDLKPSTVKKLE------KKK 926
Query: 267 VDVSYEYSNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGH----HPSTSDSTEK 321
DV E TL ++ ++ D + + ++ER +G PS++ + EK
Sbjct: 927 DDVEVEGQGLTLFDDEEVNDDTKPTYAGHVVAVVERMPGQLFSGQLGVLRPSSAATKEK 985
>gi|426198502|gb|EKV48428.1| hypothetical protein AGABI2DRAFT_192038 [Agaricus bisporus var.
bisporus H97]
Length = 1257
Score = 309 bits (792), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 188/520 (36%), Positives = 284/520 (54%), Gaps = 27/520 (5%)
Query: 351 GRVVSIIERSPRR--DGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQ------ 402
G VV+++ER P + G +G L + + + ++ P R I+
Sbjct: 522 GHVVAVVERMPGQLFSGTLGLLRPSSAATKEKQEAERREREGDRAEEPRRGPIERPKIVW 581
Query: 403 LTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVF 462
PT + P + + + P ++ DA VA I S P ++
Sbjct: 582 FKPTDKRVPLIAIPTEQAPPDF---VQNSDAYANRLFVAC-IKRHPISSLHPFGTLVEEL 637
Query: 463 GRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDP 522
G G++E + +A+L + FS L C+P VPW +P+ E R+DLR+ I T+DP
Sbjct: 638 GPIGDIEVETSALLKDCNFPTEEFSDNVLKCIPPVPWAIPEHEFKGRQDLRDQRIITLDP 697
Query: 523 STATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPML 582
A DLDDALS++ DG VGVHIADVSYFV P TALD +A+ R+TSVY++QR +PML
Sbjct: 698 EDAKDLDDALSVKINDDGTYDVGVHIADVSYFVKPNTALDRDARKRATSVYLVQRAVPML 757
Query: 583 PVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
P +L E++ SL PG +RL FS+ + + V+ +W G+TVI+S ++SY AQ+++DGK
Sbjct: 758 PPMLCEQLCSLLPGQERLTFSVVYTMTKDAKVLKKWFGKTVIKSAGRISYREAQNVLDGK 817
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
+ ++ T+ E + D+ R I L+++++ L+ +R +GAL +++ + F
Sbjct: 818 -PLSTAFTIPE--------HDTQDIRRDIMVLFDLARQLRLERMRNGALIVDSMRLKFQL 868
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
D+ G P D + D N L EEFMLL N + A+ +A P+ LLRRH +P R+L F
Sbjct: 869 DDNGLPTDCREYDKYDSNTLVEEFMLLTNLSVAQHVAVHLPEQTLLRRHDSPLERRLINF 928
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
+ G Q+DTSS+ +SL+ + L +L AT Q A YFC+G
Sbjct: 929 VKRAERLGFQIDTSSASALMKSLDTITDPTARK--LLQLLCYKAT---QRAKYFCAG-ML 982
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEA 862
D + HYAL P+YTHFTSP+RRY D++VHR L+A L+
Sbjct: 983 DIAKYQHYALNQPLYTHFTSPIRRYADILVHRQLDAVLQG 1022
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R +FAP+ ++ L G + RVN NR +AY E + D+ I G +NRA
Sbjct: 387 RKSLFAPYLPQASLPPLLAAGKLVVGILRVNKRNRSDAYVATEVLDADIYICGSKDRNRA 446
Query: 216 VEGDFVLIK-VDRLSLWA 232
+EGD V ++ +D +W
Sbjct: 447 LEGDIVAVELLDVDEVWG 464
>gi|395328831|gb|EJF61221.1| RNB-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 1468
Score = 308 bits (790), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 195/524 (37%), Positives = 289/524 (55%), Gaps = 34/524 (6%)
Query: 350 TGRVVSIIERSPRR--DGIVGFLNVNQWFNY---------KGGSRKDAKKNRSSLSVPDR 398
G VV+++ER P + G +G L + + G R D + R + P
Sbjct: 727 AGHVVAVVERMPGQLFSGTLGLLRPSSAATKEKQEAERREREGDRGD--EPRRPIERP-- 782
Query: 399 EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHV 458
+ + PT + P + + + P + E +L A I S P +
Sbjct: 783 KIVWFKPTDKRVPLIAIPTEQAPPDFVQNSE----AYANKLFVACIKRHPISSLHPFGTL 838
Query: 459 LHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIF 518
+ G G++E + +A+L + FS + CLP PW +P+ E RKDLR+ +F
Sbjct: 839 VEELGPIGDIEVETSALLKDCNFPTEEFSDNVIKCLPPTPWSIPEREFDVRKDLRSERVF 898
Query: 519 TIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRK 578
TIDP A DLDDA+S++ DG +GVHIADVS+FV P TALD +A+ R+TSVY++QR
Sbjct: 899 TIDPDDAKDLDDAVSVKANDDGTYDIGVHIADVSFFVKPNTALDRDARKRATSVYLVQRA 958
Query: 579 IPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDI 638
+PMLP LSE+V SL PG DRLAFS+ + ++ VV +W GRT+I+S KLSY AQD+
Sbjct: 959 VPMLPPTLSEQVCSLLPGQDRLAFSVIFTMSKDAKVVKKWFGRTIIKSAAKLSYAKAQDL 1018
Query: 639 IDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKP 698
IDGK TLG+ +P + + + IK L++++K L+++RF +G ++ + +
Sbjct: 1019 IDGK-------TLGD-FP-VDPAHDAEGIAHDIKVLHDIAKQLRERRFQNGCVKTHSLRL 1069
Query: 699 VFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRK 758
F DE G P D R + N L EEFMLL N A+ +A F + A+LRRH +P R+
Sbjct: 1070 AFKLDENGLPIDCGQYQRNEANNLIEEFMLLTNIAVAQQVAVHFSEQAMLRRHDSPIERR 1129
Query: 759 LREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCS 818
L F ++ G ++DTSS +SLE + + ++L+ A+ A YFC+
Sbjct: 1130 LNAFVERAARLGYKVDTSSVATLMKSLETVEDPTA--RTILELLLQKAS---PRAKYFCA 1184
Query: 819 GDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEA 862
G D +GHYAL P+Y+HFTSP+RRY D++VHR L+A L+
Sbjct: 1185 G-MLDIAKYGHYALNVPLYSHFTSPIRRYADILVHRQLDAILQG 1227
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R +FAP+ ++ L G + RVN NR +AY E + D+ I G +NRA
Sbjct: 591 RKSLFAPYLPQASLPPLLAAGKLVVGILRVNKRNRSDAYVATEVLDADIYICGSKDRNRA 650
Query: 216 VEGDFVLIK-VDRLSLWA 232
+EGD V ++ +D +W
Sbjct: 651 LEGDIVAVELLDVDEVWG 668
>gi|118375621|ref|XP_001020994.1| RNB-like protein [Tetrahymena thermophila]
gi|89302761|gb|EAS00749.1| RNB-like protein [Tetrahymena thermophila SB210]
Length = 1250
Score = 306 bits (785), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 208/633 (32%), Positives = 315/633 (49%), Gaps = 94/633 (14%)
Query: 350 TGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPK 409
++V I E + D IVG+L Q +K+ KK P + K
Sbjct: 595 VAKIVYIFENPYQNDNIVGYLEEVQ----DNRQKKNGKKK-----------YWFIPKYSK 639
Query: 410 YPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVE 469
PKM+ + + D ++EE D I V ++ +W+EES +PQA + G G++E
Sbjct: 640 LPKMLPV--EFSDEFYHQVEENDIDISKTYVVGKMKDWSEESYYPQATISECLGERGDIE 697
Query: 470 PQINAILYENAICCSGFSPESLSCLPCV--------PWEVPQEELLSRKDLRNFCIFTID 521
+ + +L E + F+P + L + +P+ E R DL I TID
Sbjct: 698 VECDTLLKEFNVYNQDFTPATEEYLNKYREQLNDNGEYVIPESEKNIRWDLTKEIICTID 757
Query: 522 PSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPM 581
P A DLDDALSI+ L D I +GVHIADVS+FV P T+LD +A++R+TSVY++ R IPM
Sbjct: 758 PHDAKDLDDALSIKYLHDDIYEIGVHIADVSHFVQPNTSLDDDARLRTTSVYLVHRVIPM 817
Query: 582 LPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW-----IGRTVIRSCCKLSYEHAQ 636
LP LL E + SLNP V+RLAF++F+ + G+V+ W IG++VI+SC K SY+ Q
Sbjct: 818 LPRLLCENLCSLNPNVERLAFTVFFQMKENGEVL--WDGPIRIGKSVIKSCNKFSYDTVQ 875
Query: 637 DIIDGKFDVESSNTLGE-GWPQ--LYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRL 693
+I+ K ++S L E PQ + Q + D++ L ++ ++ RF G L +
Sbjct: 876 MMIEKK--IKSPGELPEHNIPQQGVDSQKMFDDILL----LAKLGMNRRESRFKGGVLSI 929
Query: 694 ENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPA 753
E+ K F +E P D L R+D F+ EEFMLLAN+ A+ + + A+LR+H
Sbjct: 930 ESVKKRFKLNEKLWPVDFTLEERKDAMFVVEEFMLLANQIVAKEMVKQCKSLAVLRQHCY 989
Query: 754 PNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFD---ILINYATRPM 810
P+ K ++ K G Q+D SS +QS+E + KDD + F+ L +
Sbjct: 990 PSDIKQKQLNVIAKKFGHQIDFSSLQAINQSIEDIK---KDDKLSFEKKLFLKKQMFLVL 1046
Query: 811 QLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR 870
+ A YF + ++W H+AL F VYTHFTSP+RRYPDL+VHR + + L+
Sbjct: 1047 EQALYFVADQLP-PSEWKHFALNFDVYTHFTSPIRRYPDLLVHRVMYSILQ--------- 1096
Query: 871 RMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCND 930
Y +DA + +E LS+ + CN+
Sbjct: 1097 ---------------------YKQDAVKYIEKSSLLSIMEV----------------CNE 1119
Query: 931 RKLACRNVKDACVKLYMWILLKKKEVLFSCLIL 963
K + V D C K++M + LK V +++
Sbjct: 1120 NKAKSKQVSDNCQKIFMCLYLKDHSVQSKGMVI 1152
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Query: 160 FAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEGD 219
F PHWS + +N+A+++ AFK +Y N N+ K + + V I QNRA+
Sbjct: 463 FEPHWSSQQINDAIKQKKAFKGVYTANEKNQQLGRIKCDEIDGLVFINSYIYQNRALHNS 522
Query: 220 ---FVLIKVDRLSLWAKMKGFSNNSSI 243
FV+I+ D S ++K NS I
Sbjct: 523 VVGFVIIQGDPSS---RLKNIEGNSDI 546
>gi|392575246|gb|EIW68380.1| hypothetical protein TREMEDRAFT_32205 [Tremella mesenterica DSM
1558]
Length = 1204
Score = 306 bits (785), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 197/521 (37%), Positives = 278/521 (53%), Gaps = 32/521 (6%)
Query: 350 TGRVVSIIERSPRR--DGIVGFLNVN-------QWFNYKGGSRKDAKKNRSSLSVPDREY 400
G VV+++ER P + G +G L + Q + +++K R + + P +
Sbjct: 485 AGHVVAVVERMPAQLFSGQLGLLRPSSVATKEKQDLERRERGEEESKVKRGNEAKP--KI 542
Query: 401 IQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLH 460
+ PT + P M + P ++ DA E VA I W S P ++
Sbjct: 543 VWFKPTDKRVPLMAIPTDQAPADF---MDNPDAYAERLFVAC-IKRWPISSLHPFGTLVE 598
Query: 461 VFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTI 520
G G+ E + A+L + FS +L C+P +P+ +P+ ++ +R DLR +FTI
Sbjct: 599 ELGPIGDCEVETAALLKDCNFPTEDFSESALKCVPPLPFAIPERDIEARTDLRGERVFTI 658
Query: 521 DPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIP 580
DP A DLDDALSI ++G VGVHIADVSYFV +ALD EA+ R T+VY+ QR +P
Sbjct: 659 DPPNAKDLDDALSISSDAEGNYLVGVHIADVSYFVKTNSALDREARRRGTTVYLAQRAVP 718
Query: 581 MLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVI-RSCCKLSYEHAQDII 639
MLP LSE + SL PG +RLAFS + ++ G V+D+ GR+VI RSC +LSY Q++I
Sbjct: 719 MLPPQLSEGLCSLRPGEERLAFSAMFIVSKDGVVLDKSFGRSVINRSCAQLSYSDVQNVI 778
Query: 640 DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPV 699
G P S V I++LY +S L+D+R +GA+ + K
Sbjct: 779 TGSLLP----------PDKIVAHSTSAVEDDIRALYVLSAKLRDRRLDNGAMLAKKIKLS 828
Query: 700 FLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKL 759
F DE G P D + D N L EEFMLLAN + A+VIA P+ ALLRRH P R+L
Sbjct: 829 FTLDEEGRPIDCRSQKKTDSNMLVEEFMLLANTSIAQVIASGLPEQALLRRHEPPIERRL 888
Query: 760 REFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSG 819
F K G D +S+G +S E + +D V ++L + MQ A YFC+G
Sbjct: 889 AGFVKRAEKLGYTFDPASAGTLQKSFEAVED--EDAAVCLELL---KRKSMQQARYFCTG 943
Query: 820 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
D + H+AL P+YTHFTSP+RRY D++VHR L+A L
Sbjct: 944 -MLDIAKYWHWALNIPLYTHFTSPIRRYADVLVHRMLDACL 983
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%)
Query: 150 SHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGI 209
S Q R +FAP+ ++ L G + RVN NR +AY + + D+ I+G
Sbjct: 345 SAQGPLRKSLFAPYLPQTSLPPLLAAGKLVVGVLRVNKKNRSDAYVATDVLDADIYISGS 404
Query: 210 AAQNRAVEGDFVLIKV 225
+NRA+EGD V +++
Sbjct: 405 RDRNRALEGDIVAVEL 420
>gi|195151845|ref|XP_002016849.1| GL21852 [Drosophila persimilis]
gi|194111906|gb|EDW33949.1| GL21852 [Drosophila persimilis]
Length = 978
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 229/776 (29%), Positives = 351/776 (45%), Gaps = 139/776 (17%)
Query: 102 EESAESGSTQSQLLLATDLCGSIISRSCPEPIANDSSCWAYTNKD-----DNPSHQSEAR 156
+E +SG ++++L TD G+ + +S + + +D D SH++
Sbjct: 165 KEFEQSGMANTRVVLLTDDAGNRAKAEAEGILVASASEYVKSLEDFPLLLDKLSHKTFDN 224
Query: 157 CKIFAP----HWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQ 212
K P H SM+ V E L + ++ + N LE +E + +LI G
Sbjct: 225 EKQALPQYPAHLSMKQVLEGLRLKKLLQGAFQASRENYLEGSVNVETYEKGILIQGRECL 284
Query: 213 NRAVEGDFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYE 272
NRAV+GD V +++ S W+ P+E
Sbjct: 285 NRAVDGDLVAVELLPESEWSA----------------PSE-------------------- 308
Query: 273 YSNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMN 332
+L EK ++ DD S E +E + + QQ
Sbjct: 309 ----IVLEEKNVYADDVPSEERAEEE--------------------KDMLKQVQQAAAAA 344
Query: 333 AIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSS 392
+ ER PTGR+V I+ R +W Y G + +N +
Sbjct: 345 SAERT-----------PTGRIVGIVRR--------------KWRQYCGILQPSLIENTN- 378
Query: 393 LSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESP 452
+I P K P++ + + A ++ + + ID W S
Sbjct: 379 ------RHI-FVPADRKIPRIRIETRQA------------AKLQNQRIIVTIDTWPRNSR 419
Query: 453 FPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDL 512
+PQ H + G G++ + IL E+ + FS E LS LP +PW + E+ R DL
Sbjct: 420 YPQGHFVRSLGPLGDMATENEVILLEHDVPHCKFSEEVLSFLPKLPWSITAEDYAKRVDL 479
Query: 513 RNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSV 572
R I ++DP TD+DDAL L +G VGVHIADVS+F+ PG ALD EA R T+V
Sbjct: 480 RELDICSVDPPGCTDIDDALHCRELPNGNFEVGVHIADVSHFIRPGNALDKEAAARGTTV 539
Query: 573 YMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSY 632
Y++ ++I M+P LLS + SL GV+R AFS W+++ +V+D+ ++VI+S ++Y
Sbjct: 540 YLVGKRIDMVPELLSSNLCSLVGGVERFAFSCVWEVDKEANVIDKRFHKSVIKSKRAMTY 599
Query: 633 EHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALR 692
E AQ +ID + S++ +S++ L ++KILK +R +GAL
Sbjct: 600 EEAQVLIDDA-------------------TQQSEIAKSLRHLNRLAKILKKRRMDNGALV 640
Query: 693 LENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH 751
L + + F D E P + + N + EEFMLLAN T AE IA F + A+LRRH
Sbjct: 641 LASPEIRFQVDSETHEPLEVEAKQMRETNSMVEEFMLLANITVAEHIAAEFTECAVLRRH 700
Query: 752 PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPM 810
P P G Q+DT + SL++ +K+D F+ +I TR M
Sbjct: 701 PKPPPTNFDPLVKAARYQGFQVDTETGLVLSHSLDKC---VKEDNPYFNTMIRILTTRCM 757
Query: 811 QLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
A YF SG + + ++ HY LA P+YTHFTSP+RRY D++VHR L A++ A+ Y
Sbjct: 758 MQAVYFISGSLQKE-EFFHYGLAAPIYTHFTSPIRRYSDIMVHRLLAASIGADSTY 812
>gi|308497356|ref|XP_003110865.1| hypothetical protein CRE_04763 [Caenorhabditis remanei]
gi|308242745|gb|EFO86697.1| hypothetical protein CRE_04763 [Caenorhabditis remanei]
Length = 871
Score = 304 bits (779), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 171/438 (39%), Positives = 247/438 (56%), Gaps = 20/438 (4%)
Query: 435 IEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCL 494
E L A+I +W ++S + ++ + G GE++ + I+YE+ I F+ E +S L
Sbjct: 279 FEKFLYTAKIIDWRDDSVYADGQLIKLLGVSGEIDTETERIVYEHQIDHREFTDECISSL 338
Query: 495 PCVP---WEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISR------VG 545
P W +P E R+D RN +FTIDP TA DLDDAL + + D + +G
Sbjct: 339 PVSTAEQWTIPDSEFEYRRDFRNDIVFTIDPKTARDLDDALHAKHIDDCDGKGTPGVEIG 398
Query: 546 VHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIF 605
VHIADV++F+ GT LD A R S Y+ Q IPMLP +L E++ SLNPGVDRLAFS
Sbjct: 399 VHIADVTFFLKEGTELDRWASERGNSTYLSQLVIPMLPRILCEQLCSLNPGVDRLAFSTV 458
Query: 606 WDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDII---DGKFDVESSNTLGEGWPQLYGQF 662
+ ++ G++ D W GR++IRS KL+YEHAQD I D +F+ + +G
Sbjct: 459 FKMSYEGELKDVWFGRSIIRSRVKLAYEHAQDFIENPDKEFEATELPGISDGNTP----- 513
Query: 663 EWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFL 722
+++ L+ V++IL+ KR GALR+E K F+ DE P + +D N L
Sbjct: 514 --TEIKEKTLMLHRVAQILRKKREDSGALRIELPKLKFVMDEAKRPQGVSIYEIKDSNKL 571
Query: 723 FEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFH 782
EEFMLLAN A+ I FPD ALLR HP P + +++ C++ G LD +SG
Sbjct: 572 VEEFMLLANMEVAKKIESCFPDKALLRNHPPPKEKMIKDVADQCARIGFPLDGKTSGMLS 631
Query: 783 QSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTS 842
SL + + + + ++ + +PMQ A YFC+ + + + HYAL YTHFTS
Sbjct: 632 TSLRKYQGNSRLFMCIRQVISSLTIKPMQQAKYFCTFEMA-PSFFHHYALNVDHYTHFTS 690
Query: 843 PLRRYPDLVVHRTLNAAL 860
P+RRYPD++VHR L A+L
Sbjct: 691 PIRRYPDVIVHRQLAASL 708
>gi|24649634|ref|NP_651246.2| Dis3, isoform A [Drosophila melanogaster]
gi|442620866|ref|NP_001262910.1| Dis3, isoform B [Drosophila melanogaster]
gi|7301148|gb|AAF56281.1| Dis3, isoform A [Drosophila melanogaster]
gi|440217834|gb|AGB96290.1| Dis3, isoform B [Drosophila melanogaster]
Length = 982
Score = 304 bits (778), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 212/709 (29%), Positives = 333/709 (46%), Gaps = 132/709 (18%)
Query: 160 FAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEGD 219
+ PH SM+ + E L + + ++ + N LE +E + +LI G + NRAV+GD
Sbjct: 232 YPPHLSMKELLEGLRQNKLLQGTFQASRENYLEGTVNVEKFEKGILIQGRESLNRAVDGD 291
Query: 220 FVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCTLL 279
V +++ + W+ P+E +L
Sbjct: 292 LVAVELLPEAEWSA----------------PSE------------------------IVL 311
Query: 280 SEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSA 339
EK ++ D+ S E + +N+ +N + +A
Sbjct: 312 EEKNVYADEVPSEE-----------------------------RAKDENEMLNQVR--AA 340
Query: 340 MISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDRE 399
+S+ T PTGR+V I+ R +W Y G + + D
Sbjct: 341 ALSAERT--PTGRIVGIVRR--------------KWRQYCGILQPSL--------IEDTN 376
Query: 400 YIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVL 459
P K P++ + + A ++ + + ID W S +P H +
Sbjct: 377 RHIFVPADRKIPRIRIETRQA------------AMLQNQRIIVTIDTWPRNSRYPHGHFV 424
Query: 460 HVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFT 519
G G++ + IL E+ + FS E LS LP +PW + E+ R DLR+ I +
Sbjct: 425 RSLGPLGDMATENEVILLEHDVPHCKFSDEVLSFLPKMPWTITDEDYSKRVDLRDLYICS 484
Query: 520 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 579
+DP TD+DDAL + L +G VGVHIADVS+F+ PG ALD+EA R T+VY++ ++I
Sbjct: 485 VDPPGCTDIDDALHCKELPNGNLEVGVHIADVSHFIRPGNALDMEAAARGTTVYLVGKRI 544
Query: 580 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDII 639
M+P LLS + SL GV+R AFS W++++ +V+ + ++VI+S ++YE AQ+II
Sbjct: 545 DMVPELLSSNLCSLVGGVERFAFSCVWEVDNEANVLSKRFHKSVIKSKRAMTYEEAQNII 604
Query: 640 DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPV 699
D D N ++ +S+++L ++KILK +R +GAL L + +
Sbjct: 605 D---DATQQN----------------EIAKSLRNLNRLAKILKKRRMDNGALVLASPEIR 645
Query: 700 FLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRK 758
F D E P + + + N + EEFMLLAN T AE IA F + A+LRRHP P
Sbjct: 646 FQVDSETHEPLEVEVKQMRETNSMVEEFMLLANITVAEHIATEFSECAVLRRHPRPPPTN 705
Query: 759 LREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFC 817
G Q+D +S + SL++ +K D F+ +I TR M A YF
Sbjct: 706 FDPLVKSARYQGFQVDINSGLELSHSLDKC---VKADNPYFNTMIRILTTRCMMQAVYFI 762
Query: 818 SGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
SG + + ++ HY LA P+YTHFTSP+RRY D++VHR L A++ A+ Y
Sbjct: 763 SGSLQKE-EFFHYGLAAPIYTHFTSPIRRYSDIMVHRLLAASIGADSTY 810
>gi|385719244|gb|AFI71920.1| FI19082p1 [Drosophila melanogaster]
Length = 1005
Score = 304 bits (778), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 212/709 (29%), Positives = 333/709 (46%), Gaps = 132/709 (18%)
Query: 160 FAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEGD 219
+ PH SM+ + E L + + ++ + N LE +E + +LI G + NRAV+GD
Sbjct: 255 YPPHLSMKELLEGLRQNKLLQGTFQASRENYLEGTVNVEKFEKGILIQGRESLNRAVDGD 314
Query: 220 FVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCTLL 279
V +++ + W+ P+E +L
Sbjct: 315 LVAVELLPEAEWSA----------------PSE------------------------IVL 334
Query: 280 SEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSA 339
EK ++ D+ S E + +N+ +N + +A
Sbjct: 335 EEKNVYADEVPSEE-----------------------------RAKDENEMLNQVR--AA 363
Query: 340 MISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDRE 399
+S+ T PTGR+V I+ R +W Y G + + D
Sbjct: 364 ALSAERT--PTGRIVGIVRR--------------KWRQYCGILQPSL--------IEDTN 399
Query: 400 YIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVL 459
P K P++ + + A ++ + + ID W S +P H +
Sbjct: 400 RHIFVPADRKIPRIRIETRQA------------AMLQNQRIIVTIDTWPRNSRYPHGHFV 447
Query: 460 HVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFT 519
G G++ + IL E+ + FS E LS LP +PW + E+ R DLR+ I +
Sbjct: 448 RSLGPLGDMATENEVILLEHDVPHCKFSDEVLSFLPKMPWTITDEDYSKRVDLRDLYICS 507
Query: 520 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 579
+DP TD+DDAL + L +G VGVHIADVS+F+ PG ALD+EA R T+VY++ ++I
Sbjct: 508 VDPPGCTDIDDALHCKELPNGNLEVGVHIADVSHFIRPGNALDMEAAARGTTVYLVGKRI 567
Query: 580 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDII 639
M+P LLS + SL GV+R AFS W++++ +V+ + ++VI+S ++YE AQ+II
Sbjct: 568 DMVPELLSSNLCSLVGGVERFAFSCVWEVDNEANVLSKRFHKSVIKSKRAMTYEEAQNII 627
Query: 640 DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPV 699
D D N ++ +S+++L ++KILK +R +GAL L + +
Sbjct: 628 D---DATQQN----------------EIAKSLRNLNRLAKILKKRRMDNGALVLASPEIR 668
Query: 700 FLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRK 758
F D E P + + + N + EEFMLLAN T AE IA F + A+LRRHP P
Sbjct: 669 FQVDSETHEPLEVEVKQMRETNSMVEEFMLLANITVAEHIATEFSECAVLRRHPRPPPTN 728
Query: 759 LREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFC 817
G Q+D +S + SL++ +K D F+ +I TR M A YF
Sbjct: 729 FDPLVKSARYQGFQVDINSGLELSHSLDKC---VKADNPYFNTMIRILTTRCMMQAVYFI 785
Query: 818 SGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
SG + + ++ HY LA P+YTHFTSP+RRY D++VHR L A++ A+ Y
Sbjct: 786 SGSLQKE-EFFHYGLAAPIYTHFTSPIRRYSDIMVHRLLAASIGADSTY 833
>gi|15292611|gb|AAK93574.1| SD10981p [Drosophila melanogaster]
Length = 982
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 212/709 (29%), Positives = 332/709 (46%), Gaps = 132/709 (18%)
Query: 160 FAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEGD 219
+ PH SM+ + E L + + ++ + N LE +E + +LI G + NRAV+GD
Sbjct: 232 YPPHLSMKELLEGLRQNKLLQGTFQASRENYLEGTVNVEKFEKGILIQGRESLNRAVDGD 291
Query: 220 FVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCTLL 279
V +++ + W+ P+E +L
Sbjct: 292 LVAVELLPEAEWSA----------------PSE------------------------IVL 311
Query: 280 SEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSA 339
EK ++ D+ S E + +N+ +N + +A
Sbjct: 312 EEKNVYADEVPSEE-----------------------------RAKDENEMLNQVR--AA 340
Query: 340 MISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDRE 399
+S+ T PTGR+V I+ R +W Y G + + D
Sbjct: 341 ALSAERT--PTGRIVGIVRR--------------KWRQYCGILQPSL--------IEDTN 376
Query: 400 YIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVL 459
P K P++ + + A ++ + + ID W S +P H +
Sbjct: 377 RHIFVPADRKIPRIRIETRQA------------AMLQNQRIIVTIDTWPRNSRYPHGHFV 424
Query: 460 HVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFT 519
G G++ + IL E+ + FS E LS LP +PW + E+ R DLR+ I +
Sbjct: 425 RSLGPLGDMATENEVILLEHDVPHCKFSDEVLSFLPKMPWTITDEDYSKRVDLRDLYICS 484
Query: 520 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 579
+DP TD+DDAL L +G VGVHIADVS+F+ PG ALD+EA R T+VY++ ++I
Sbjct: 485 VDPPGCTDIDDALHCRELPNGNLEVGVHIADVSHFIRPGNALDMEAAARGTTVYLVGKRI 544
Query: 580 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDII 639
M+P LLS + SL GV+R AFS W++++ +V+ + ++VI+S ++YE AQ+II
Sbjct: 545 DMVPELLSSNLCSLVGGVERFAFSCVWEVDNEANVLSKRFHKSVIKSKRAMTYEEAQNII 604
Query: 640 DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPV 699
D D N ++ +S+++L ++KILK +R +GAL L + +
Sbjct: 605 D---DATQQN----------------EIAKSLRNLNRLAKILKKRRMDNGALVLASPEIR 645
Query: 700 FLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRK 758
F D E P + + + N + EEFMLLAN T AE IA F + A+LRRHP P
Sbjct: 646 FQVDSETHEPLEVEVKQMRETNSMVEEFMLLANITVAEHIATEFSECAVLRRHPRPPPTN 705
Query: 759 LREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFC 817
G Q+D +S + SL++ +K D F+ +I TR M A YF
Sbjct: 706 FDPLVKSARYQGFQVDINSGLELSHSLDKC---VKADNPYFNTMIRILTTRCMMQAVYFI 762
Query: 818 SGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
SG + + ++ HY LA P+YTHFTSP+RRY D++VHR L A++ A+ Y
Sbjct: 763 SGSLQKE-EFFHYGLAAPIYTHFTSPIRRYSDIMVHRLLAASIGADSTY 810
>gi|299115727|emb|CBN74292.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 998
Score = 303 bits (776), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 224/729 (30%), Positives = 326/729 (44%), Gaps = 111/729 (15%)
Query: 143 TNKDDNPSHQSEA-RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQ 201
+N+ + P ++ R +F H M + + +G F+ R + Y +G+Q
Sbjct: 214 SNRGNPPQRRTGGQRVLLFEEHKPMSELTAGIRQGRYFQGALRAERSSSNRCYVVAQGMQ 273
Query: 202 TD----VLITGIAAQNRAVEGDFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMH 257
V I G NRAV+GD V +
Sbjct: 274 DKERIAVYIRGAQCINRAVDGDIVAFE--------------------------------- 300
Query: 258 SDICKGKSKVDVSYEYSNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSD 317
LL E + D+S A +E G I + P+ +
Sbjct: 301 --------------------LLPEAEWYSQGDTSGGATKEEKTPTGGEMEIPDNRPTEN- 339
Query: 318 STEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFN 377
V + IE+ + + T++P GRVV II R+ R G L V
Sbjct: 340 ---LVPDPTAQPAIEEIEK-TKTLEGAGTRQPCGRVVGIIRRNWREKQYCGSLRVE---- 391
Query: 378 YKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEM 437
G R A S S P K P + + + KR+
Sbjct: 392 ---GDRAVASGKGQSTSA------LFMPVDRKIPWVRIQTRQRDVLSTKRI--------- 433
Query: 438 ELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV 497
LVA +D W +P H + G G + IL E+ I FS + L+CLP
Sbjct: 434 -LVA--MDSWPAWCKYPLGHYVKTLGEKGAKATETEVILLEHEIPHESFSGKVLACLPPE 490
Query: 498 PWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLP 557
W + E RKDLR+ + +IDP D+DDAL L +G VGVHIADV++FV
Sbjct: 491 DWAITPENSEGRKDLRHLPVLSIDPPGCKDIDDALHARPLENGNLEVGVHIADVTHFVEA 550
Query: 558 GTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR 617
G+ALD EA RSTS Y+++R++ MLP +L+E + SL P VDR AFS+ W++ AG +VD
Sbjct: 551 GSALDQEASSRSTSTYLVERRLDMLPGMLTETLCSLKPNVDRFAFSVIWEMTPAGVIVDV 610
Query: 618 WIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEV 677
+++I S L+Y AQ ++D D + E S++ L ++
Sbjct: 611 DFCKSIIHSVAGLTYNEAQLMLD---DPNIQDVKAE----------------SVRRLNDL 651
Query: 678 SKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 736
+KI + +R GAL L + + F+ D E P D + ++ N L EEFMLLAN T +
Sbjct: 652 AKIFRKRRMDSGALTLASPEVRFVLDSESQNPTDVQMYALKETNALVEEFMLLANITVGK 711
Query: 737 VIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDY 796
I R FP ++LRRHP+P+ ++ A G++LD +S + QSL++A + D
Sbjct: 712 KILRHFPTLSVLRRHPSPSRQQFDGLLAIAQAVGIKLDVDNSKKLAQSLDRATR--EGDP 769
Query: 797 VLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTL 856
+L +TR M A YFCSG+ + DW HY LA P+YTHFTSP+RRY D+ VHR L
Sbjct: 770 YFNKLLRILSTRCMMPAQYFCSGE-QSQEDWHHYGLAAPIYTHFTSPIRRYADVCVHRLL 828
Query: 857 NAALEAEKL 865
AA+ L
Sbjct: 829 GAAIGVAPL 837
>gi|392894994|ref|NP_498160.2| Protein F48E8.6 [Caenorhabditis elegans]
gi|353526303|sp|Q09568.2|YR86_CAEEL RecName: Full=Uncharacterized ribonuclease F48E8.6
gi|373254470|emb|CCD71518.1| Protein F48E8.6 [Caenorhabditis elegans]
Length = 848
Score = 302 bits (774), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 176/469 (37%), Positives = 258/469 (55%), Gaps = 18/469 (3%)
Query: 401 IQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLH 460
+ T + P++++ D+ R ++ E L A+I +W ES + ++
Sbjct: 226 VLFVATDSRVPRILIPKSDVDKEFFSRPKD----FERFLYTAKITDWRAESVYADGRLVK 281
Query: 461 VFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVP---WEVPQEELLSRKDLRNFCI 517
+ G GE++ + I+YE+ I FS E L LP W+VP E R+D R+ +
Sbjct: 282 LLGMSGEIDTETERIVYEHQIDHREFSDECLESLPITTAENWKVPDAEFEYRRDFRSDIV 341
Query: 518 FTIDPSTATDLDDALSIERLSDGISR------VGVHIADVSYFVLPGTALDIEAQVRSTS 571
FTIDP TA DLDDAL + + D + +GVHIADV++F+ GT LD A R S
Sbjct: 342 FTIDPKTARDLDDALHAKHIDDCDGKGTPGLEIGVHIADVTFFLKEGTELDKWASERGNS 401
Query: 572 VYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLS 631
Y+ Q IPMLP +L E++ SLNPGVDRL+FS + ++ ++ D W GR+VIRS KL+
Sbjct: 402 TYLSQTVIPMLPRILCEQLCSLNPGVDRLSFSTVFKMSYEAELYDVWFGRSVIRSRVKLA 461
Query: 632 YEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGAL 691
YEHAQD I+ E T E P + ++ L+ ++++L+ KR GAL
Sbjct: 462 YEHAQDFIENP---EKDFTCDE-LPDISDGNTPFEIKEKTLMLHRIAQVLRQKREDSGAL 517
Query: 692 RLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH 751
R+E + F DE P + +D N L EEFMLLAN A+ IA FP+ ALLR H
Sbjct: 518 RIELPRLKFALDEDKKPQGVSIYEIKDSNKLVEEFMLLANMEVAKKIAENFPEHALLRNH 577
Query: 752 PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQ 811
P P + +++ C++ G LD +SG SL + + K + D + ++ + +PMQ
Sbjct: 578 PPPKEKMIKDVAEQCARIGFPLDGRTSGLLSTSLRKYQGKSRLDMCIRQVISSLTIKPMQ 637
Query: 812 LASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
A YFC+ + + + H+AL YTHFTSP+RRYPD++VHR L AAL
Sbjct: 638 QAKYFCTFEMP-LSFYHHFALNVDHYTHFTSPIRRYPDVIVHRQLAAAL 685
Score = 43.9 bits (102), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 17/118 (14%)
Query: 158 KIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYC-KIEGV-QTDVLITGIAAQNRA 215
KIF + S E + +E G FK + R+N N E + +G DVL+ G +NRA
Sbjct: 63 KIFTEYISKEETDAGIEDGSMFKGVLRINPKNYQECFLDHPKGTNHPDVLVLG-QDRNRA 121
Query: 216 VEGDFVLIK-----------VDRLSLWAKMKGFSNNSSIVEDSNLP--TEANGMHSDI 260
++GD V +K V+ + WA+ K NS D+N P TE + ++I
Sbjct: 122 MQGDVVAVKIKPKEDWLVNYVEYVKWWAEHKKGDRNSGKT-DNNSPNKTEKRCLRNEI 178
>gi|198453286|ref|XP_001359139.2| GA19573 [Drosophila pseudoobscura pseudoobscura]
gi|198132293|gb|EAL28283.2| GA19573 [Drosophila pseudoobscura pseudoobscura]
Length = 978
Score = 302 bits (774), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 229/772 (29%), Positives = 351/772 (45%), Gaps = 139/772 (18%)
Query: 106 ESGSTQSQLLLATDLCGSIISRSCPEPIANDSSCWAYTNKD-----DNPSHQSEARCKIF 160
+SG ++++L TD G+ + +S + + +D D SH++ K
Sbjct: 169 QSGMANTRVVLLTDDAGNRAKAEAEGILVASASEYVKSLEDFPLLLDKLSHKTFDNEKQA 228
Query: 161 AP----HWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAV 216
P H SM+ V E L + ++ + N LE +E + +LI G NRAV
Sbjct: 229 LPQYPAHLSMKQVLEGLRLKKLLQGAFQASRENYLEGSVNVETYEKGILIQGRECLNRAV 288
Query: 217 EGDFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNC 276
+GD V +++ S W+ P+E
Sbjct: 289 DGDLVAVELLPESEWSA----------------PSE------------------------ 308
Query: 277 TLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIER 336
+L EK ++ DD S E +E D ++V QQ + ER
Sbjct: 309 IVLEEKNVYADDVPSEERAEEE-----------------KDMLKQV---QQAAAAASAER 348
Query: 337 LSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVP 396
PTGR+V I+ R +W Y G + +N +
Sbjct: 349 T-----------PTGRIVGIVRR--------------KWRQYCGILQPSLIENTN----- 378
Query: 397 DREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQA 456
+I P K P++ + + A ++ + + ID W S +PQ
Sbjct: 379 --RHI-FVPADRKIPRIRIETRQA------------AKLQNQRIIVTIDTWPRNSRYPQG 423
Query: 457 HVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFC 516
H + G G++ + IL E+ + FS + LS LP +PW + E+ R DLR
Sbjct: 424 HFVRSLGPLGDMATENEVILLEHDVPHCKFSEKVLSFLPKLPWSITAEDYAKRVDLRELD 483
Query: 517 IFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQ 576
I ++DP TD+DDAL L +G VGVHIADVS+F+ PG ALD EA R T+VY++
Sbjct: 484 ICSVDPPGCTDIDDALHCRELPNGNFEVGVHIADVSHFIRPGNALDKEAAARGTTVYLVG 543
Query: 577 RKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQ 636
++I M+P LLS + SL GV+R AFS W+++ +V+D+ ++VI+S ++YE AQ
Sbjct: 544 KRIDMVPELLSSNLCSLVGGVERFAFSCVWEVDKEANVIDKRFHKSVIKSKRAMTYEEAQ 603
Query: 637 DIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENS 696
+ID + S++ +S++ L ++KILK +R +GAL L +
Sbjct: 604 VLIDDA-------------------TQQSEIAKSLRHLNRLAKILKKRRMDNGALVLASP 644
Query: 697 KPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPN 755
+ F D E P + + N + EEFMLLAN T AE IA F + A+LRRHP P
Sbjct: 645 EIRFQVDSETHEPLEVEAKQMRETNSMVEEFMLLANITVAEHIAAEFTECAVLRRHPKPP 704
Query: 756 MRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLAS 814
G Q+DT + SL++ +K+D F+ +I TR M A
Sbjct: 705 PTNFDPLVKAARYQGFQVDTETGLVLSHSLDKC---VKEDNPYFNTMIRILTTRCMMQAV 761
Query: 815 YFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
YF SG + + ++ HY LA P+YTHFTSP+RRY D++VHR L A++ A+ Y
Sbjct: 762 YFISGSLQKE-EFFHYGLAAPIYTHFTSPIRRYSDIMVHRLLAASIGADSTY 812
>gi|403377456|gb|EJY88725.1| RNB-like protein [Oxytricha trifallax]
Length = 1041
Score = 302 bits (773), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 223/712 (31%), Positives = 343/712 (48%), Gaps = 101/712 (14%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
++ H S E + +++G F+ V+ EA IE + D+L+ G+ QNRA G
Sbjct: 254 LYEDHLSFEEMILGIKEGRYFQGRLNVSRTTLEEATIAIEYLNQDLLVVGLQDQNRAFNG 313
Query: 219 DFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCTL 278
D V ++V S W S +++E S + +Y +
Sbjct: 314 DIVCLEVLPESQWISNYKSSQPVNVLEQS----------------------AVQYMD--- 348
Query: 279 LSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLS 338
+H ++D N E R+ N I EK+++ +Q
Sbjct: 349 -KADEVHVEEDLQ----NLEESNRQRLNLI-----------EKINNEKQ----------- 381
Query: 339 AMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDR 398
KR T RV ++++ + G + +Q +R+ + +L V +
Sbjct: 382 --------KRVTARVRGVLKKMNKTYGGSIIKSSDQ----TEETRRKFELFLKNLRVEQK 429
Query: 399 EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHV 458
+Y KY V +P +I K +E + R W + SPFPQ
Sbjct: 430 DYF-------KYRVFVPFNLQMPQAIVKSARP--EALENKRFILRFSTWTKYSPFPQGQF 480
Query: 459 LHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC--VPWEVPQEELLSRKDLRNFC 516
+ + G G ++ + IL+E + FS + L CLP W++PQEE+ R D+R+
Sbjct: 481 VKIIGEEGSIKTEGEMILHEFNVDTRPFSNKVLQCLPTDGANWKIPQEEIDKRLDIRHLI 540
Query: 517 IFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQ 576
+ ++DP D+DDAL L +G VGVHIADV++FV G+ +D EA R T+VYM+
Sbjct: 541 VASVDPIGCKDIDDALHCRILPNGNYEVGVHIADVTHFVKAGSEIDKEAARRCTTVYMVD 600
Query: 577 RKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDV-VDRWIGRTVIRSCCKLSYEHA 635
R+ MLP LL+E + S+ G +RL FS+ W+++S V ++VI+S L Y A
Sbjct: 601 RRTDMLPGLLTENLCSIRGGTERLVFSVIWEIDSKKFTPVKSSFHKSVIKSAAALDYYTA 660
Query: 636 QDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLEN 695
QD+I+ D + L E S++ L +++IL+D+R GAL L +
Sbjct: 661 QDMIN---DPNNKTELTE----------------SLRRLLTIARILRDRRTAKGALTLAS 701
Query: 696 SKPVF-LFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAP 754
+ F L D TP D D +F+ EEFMLLAN AE I + +P A+LRRHP P
Sbjct: 702 PELKFKLDDNRETPTDVTEYRHVDTHFMIEEFMLLANIAVAEKIVQHYPSFAILRRHPQP 761
Query: 755 NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLA 813
+++ EF +K+G ++ SS F SL++A E+ D Y F+ ++ ATR M A
Sbjct: 762 KQKEVAEFVDQLAKYGFEMALDSSKSFADSLDRA-ERPNDPY--FNKIVRIMATRCMHQA 818
Query: 814 SYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 865
YFC DF D ++ HY LA PVYTHFTSP+RRY D++VHR L AA++ + L
Sbjct: 819 VYFCLADF-DISEVFHYGLAVPVYTHFTSPIRRYADVLVHRLLAAAIDIQSL 869
>gi|194909762|ref|XP_001982004.1| GG11280 [Drosophila erecta]
gi|190656642|gb|EDV53874.1| GG11280 [Drosophila erecta]
Length = 982
Score = 301 bits (771), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 225/776 (28%), Positives = 353/776 (45%), Gaps = 141/776 (18%)
Query: 102 EESAESGSTQSQLLLATDLCGS--------IISRSCPEPIANDSSCWAYTNKDDNPSHQS 153
+E SG ++++L TD G+ I+ S E + + +K + + ++
Sbjct: 165 KEFERSGRAATRVILLTDDAGNRAKAEEEGILVTSAAEYVKSLEDFPLLMDKLSHKTFEN 224
Query: 154 EAR-CKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQ 212
E + + PH SM+ + E L + + ++ + N LE +E + +LI G +
Sbjct: 225 EKKGLPQYPPHLSMKELLEGLRQNKLLQGAFQASRENYLEGSVSVEKFEKGILIQGRESL 284
Query: 213 NRAVEGDFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYE 272
NRAV+GD V +++ LP +V +
Sbjct: 285 NRAVDGDLVAVEL-----------------------LP-----------------EVEWS 304
Query: 273 YSNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMN 332
+ +L EK ++ D+ S E E D ++V +S
Sbjct: 305 APSEIVLEEKNVYADEVPSEERAEDE-----------------KDMLKQVRAS------- 340
Query: 333 AIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSS 392
+S + PTGR+V I+ R +W Y G +
Sbjct: 341 ---------ASSAERTPTGRIVGIVRR--------------KWRQYCGILQPSL------ 371
Query: 393 LSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESP 452
+ D P K P++ + + A ++ + + ID W S
Sbjct: 372 --IEDTNRHIFVPADRKIPRIRIETRQA------------AKLQNQRIIVTIDTWPRNSR 417
Query: 453 FPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDL 512
+P H + G G++ + IL E+ + FS E LS LP +PW++ +E+ R DL
Sbjct: 418 YPHGHFVRSLGPLGDMATENEVILLEHDVPHCKFSDEVLSFLPKMPWKITEEDYAKRVDL 477
Query: 513 RNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSV 572
R+ I ++DP TD+DDAL L +G VGVHIADVS+F+ PG ALD EA R T+V
Sbjct: 478 RDLYICSVDPPGCTDIDDALHCRELPNGNLEVGVHIADVSHFIRPGNALDKEAAARGTTV 537
Query: 573 YMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSY 632
Y++ ++I M+P LLS + SL GV+R AFS W++++ +V+ + ++VI+S ++Y
Sbjct: 538 YLVGKRIDMVPELLSSNLCSLVGGVERFAFSCVWEVDNEANVLGKRFHKSVIKSKRAMTY 597
Query: 633 EHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALR 692
E AQ IID D N L +S+++L ++KILK +R GAL
Sbjct: 598 EEAQVIID---DATQQNELA----------------KSLRNLNRLAKILKKRRMDSGALV 638
Query: 693 LENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH 751
L + + F D E P + + + N + EEFMLLAN T AE IA F + A+LRRH
Sbjct: 639 LASPEIRFQVDSETHEPLEVEVKQMRETNSMVEEFMLLANITVAEHIATEFSECAVLRRH 698
Query: 752 PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPM 810
P P G Q+D S + SL++ +K D F+ +I TR M
Sbjct: 699 PRPPPTNFDPLVKAARYQGFQVDIESGLELSHSLDKC---VKADNPYFNTMIRILTTRCM 755
Query: 811 QLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
A YF SG + + ++ HY LA P+YTHFTSP+RRY D++VHR L A++ A+ Y
Sbjct: 756 MQAVYFISGSLQKE-EFFHYGLAAPIYTHFTSPIRRYSDIMVHRLLAASIGADSTY 810
>gi|195331604|ref|XP_002032491.1| GM26588 [Drosophila sechellia]
gi|194121434|gb|EDW43477.1| GM26588 [Drosophila sechellia]
Length = 989
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 213/709 (30%), Positives = 328/709 (46%), Gaps = 132/709 (18%)
Query: 160 FAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEGD 219
+ PH SM+ + E L + + ++ + N LE +E + +LI G + NRAV+GD
Sbjct: 232 YPPHLSMKELLEGLRQNKLLQGTFQASRENYLEGSVVVEKFEKAILIQGRESLNRAVDGD 291
Query: 220 FVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCTLL 279
V +++ S W+ P+E +L
Sbjct: 292 LVAVELLPESEWSA----------------PSE------------------------IVL 311
Query: 280 SEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSA 339
EK ++ D+ S E ++ +ND + + R +A
Sbjct: 312 EEKNVYADEVPSEE-----------------------------KATDENDMLKQV-RAAA 341
Query: 340 MISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDRE 399
S + PTGR+V I+ R +W Y G + + D
Sbjct: 342 ---SSAERTPTGRIVGIVRR--------------KWRQYCGILQPSL--------IEDTN 376
Query: 400 YIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVL 459
P K P++ + + A ++ + + ID W S +P H +
Sbjct: 377 RHIFVPADRKIPRIRIETRQA------------AKLQNQRIIVTIDTWPRNSRYPHGHFV 424
Query: 460 HVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFT 519
G G++ + IL E+ + FS E LS LP +PW + E+ R DLR+ I +
Sbjct: 425 RSLGPLGDMATENEVILLEHDVPHCKFSDEVLSFLPKMPWTITDEDYSKRVDLRDLFICS 484
Query: 520 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 579
+DP TD+DDAL L +G VGVHIADVS+F+ PG ALD+EA R T+VY++ ++I
Sbjct: 485 VDPPGCTDIDDALHCRELPNGNLEVGVHIADVSHFIRPGNALDMEAAARGTTVYLVGKRI 544
Query: 580 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDII 639
M+P LLS + SL GV+R AFS W++++ +V+ + ++VI+S ++YE AQ II
Sbjct: 545 DMVPELLSSNLCSLVGGVERFAFSCVWEVDNEANVLGKRFHKSVIKSKRAMTYEEAQSII 604
Query: 640 DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPV 699
D D N ++ +S++ L ++KILK +R +GAL L + +
Sbjct: 605 D---DATQQN----------------EIAKSLRHLNRLAKILKKRRMDNGALVLASPEIR 645
Query: 700 FLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRK 758
F D E P + + + N + EEFMLLAN T AE IA F + A+LRRHP P
Sbjct: 646 FQVDSETHEPLEVEVKQMRETNSMVEEFMLLANITVAEHIATEFSECAVLRRHPRPPPTN 705
Query: 759 LREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFC 817
G Q+D S + SL++ +K D F+ +I TR M A YF
Sbjct: 706 FDPLVKSARYQGFQVDIESGLELSHSLDKC---VKADNPYFNTMIRILTTRCMMQAVYFI 762
Query: 818 SGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
SG + + ++ HY LA P+YTHFTSP+RRY D++VHR L A++ A+ Y
Sbjct: 763 SGSLQKE-EFFHYGLAAPIYTHFTSPIRRYSDIMVHRLLAASIGADSTY 810
>gi|321261077|ref|XP_003195258.1| SSD1 protein [Cryptococcus gattii WM276]
gi|317461731|gb|ADV23471.1| SSD1 protein, putative [Cryptococcus gattii WM276]
Length = 1670
Score = 300 bits (769), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 180/521 (34%), Positives = 282/521 (54%), Gaps = 27/521 (5%)
Query: 348 RPT--GRVVSIIERSPRR--DGIVGFLNVNQWFNYKGGS--RKDAKKNRSSLSVPDR--E 399
+PT G VV+++ER P + G +G L + + R++ + +++ P+ +
Sbjct: 949 KPTYAGHVVAVVERMPGQLFSGQLGVLRPSSAATKEKQELERREREGDKARKEEPETRPK 1008
Query: 400 YIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVL 459
+ PT + P + + + P ++ DA +L A I W S P ++
Sbjct: 1009 IVWFKPTDKRVPLIAIPTEQAPADF---IDNPDA-YSNKLFVATIKRWPITSLHPFGTLV 1064
Query: 460 HVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFT 519
G G E + +A+L + FS ++ CLP +PW VP+ E R DLR +FT
Sbjct: 1065 EELGTIGNSEVETSALLKDCNFPTEEFSEMTMKCLPPMPWSVPEREYDVRTDLREERVFT 1124
Query: 520 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 579
IDP A DLDDALS + +G VGVHIADVS+FV T LD EA+ R+TSV+++QR +
Sbjct: 1125 IDPHHAKDLDDALSFKDNKNGTFNVGVHIADVSFFVKANTQLDREARKRATSVFLVQRAV 1184
Query: 580 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDII 639
PM P +LSE++ SL P +RL FS + ++ G+V+ + +T+I+SC KL+Y+ A ++
Sbjct: 1185 PMFPPVLSEDLCSLVPDTERLTFSAIFTVDEEGNVLQKKFAKTIIKSCAKLTYDDALTVV 1244
Query: 640 DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPV 699
+G S + G +D+ I+SL+ ++K ++ +R +GA+ + + K
Sbjct: 1245 NGGALPRSKTS---------GTHLATDIEGDIRSLHSIAKKMRARRIENGAMVVSSLKVS 1295
Query: 700 FLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKL 759
F FD G P D + + + EEFMLL N++ A +IA A P+ ALLRRH P+ R+L
Sbjct: 1296 FEFDAQGRPVDCQTYQKGKASTIVEEFMLLTNQSVARIIANALPEQALLRRHEPPSERRL 1355
Query: 760 REFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSG 819
F +K G +D +S+G +S E + D + D+L +Q A YFC+G
Sbjct: 1356 ASFVTRATKLGFDMDPTSAGTLQKSFENVLD--NDSALCIDLLRKKV---IQRARYFCAG 1410
Query: 820 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
D + H+ L P+YTHFTSP+RRY D++VHR L+A L
Sbjct: 1411 -MLDIAKYAHWGLNAPLYTHFTSPIRRYADVLVHRMLDACL 1450
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 152 QSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAA 211
Q R +FAP+ ++ L+ G + RVN NR +AY + + D+ I G
Sbjct: 813 QGPQRKSLFAPYLPQASLPPLLQAGKLVVGVLRVNKKNRSDAYVATDVLDADIYICGSKD 872
Query: 212 QNRAVEGDFVLIK-VDRLSLWA 232
+NRA+EGD V ++ +D +W+
Sbjct: 873 RNRALEGDIVAVELLDVDEVWS 894
>gi|302852379|ref|XP_002957710.1| hypothetical protein VOLCADRAFT_107778 [Volvox carteri f.
nagariensis]
gi|300257004|gb|EFJ41259.1| hypothetical protein VOLCADRAFT_107778 [Volvox carteri f.
nagariensis]
Length = 1177
Score = 300 bits (767), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 207/660 (31%), Positives = 308/660 (46%), Gaps = 149/660 (22%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFL---------NVNQWFNYKGGSRKDAKKNRSSLSVPDR 398
R T +VV++++ SP+R +VG L ++ W + G+ N + +
Sbjct: 370 RATAKVVAVLDPSPKRSQLVGLLRLVGRLPDTSLPSWDPSRDGAAMPGPLNAAVEAARAA 429
Query: 399 EY-IQLTPTHPKYPKMVV---LVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFP 454
+ L P P+ P V V +L ++ L G+ T LV+A + W S P
Sbjct: 430 ALQLHLVPLDPRLPTCRVEADKVYNLSPALLVGLLRGEQTASRTLVSALLLSWPPASQQP 489
Query: 455 QAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRN 514
A + G+ GE+E + AIL I + F P+ L+CLP +PW + + +L R+D R+
Sbjct: 490 LAGLRSSLGQAGEIESETAAILEGQGIRATDFEPQVLACLPPLPWRIGERDLAGRRDFRS 549
Query: 515 FCIFTIDPSTATDLDDALSIERLSDGIS--------RVGVHIADVSYFVLPGTALDIEAQ 566
+F+IDP TA DLDDALSIE L+ G RVGVHIADVS+F+ P +ALD+EA
Sbjct: 550 QRVFSIDPPTAKDLDDALSIEPLTGGGPEAAEGAAWRVGVHIADVSHFIEPFSALDVEAG 609
Query: 567 VRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRS 626
+RSTS Y++QR +PMLP LL E++ LNPG DRL S+ W
Sbjct: 610 LRSTSTYLVQRVVPMLPPLLCEQLCPLNPGEDRLTCSVVW-------------------- 649
Query: 627 CCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE--VSKILKDK 684
D++ + W +G+ V+RS L V K+++ +
Sbjct: 650 -----------------DMDKHGNILSTW---FGR----SVIRSCAKLTYPLVQKMIEGE 685
Query: 685 RFTDGALRLENSKPVFLFDEYGTP-YDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFP 743
F ++ G P + +S ++ N L EEFM+LAN + A+ I++ FP
Sbjct: 686 ---------------FHAEDTGVPLHGEGVSWEQEANQLVEEFMVLANISVAKFISQVFP 730
Query: 744 DSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVL----- 798
D A+LRRHP PN K++E G++L+ SS+ +L R
Sbjct: 731 DRAMLRRHPPPNDTKMQELREAAEAAGVELNVSSAAALQTTLNALRASAPPPPPPAGEGE 790
Query: 799 -----------------------FDILINYATRPMQLASYFCSGDFKDDT-DWGHYALAF 834
++L+ ATRPMQLA YF +G + W HYALA
Sbjct: 791 GEGEGGREGGAGLLSAAARHRRKVELLVMLATRPMQLAKYFSTGSLDEAQWLWRHYALAI 850
Query: 835 PVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDK 894
YTHFTSP+RRYPD+VVHR L AAL+
Sbjct: 851 DHYTHFTSPIRRYPDVVVHRQLAAALDVT------------------------------- 879
Query: 895 DAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKK 954
+G ++ AA K+ + + VA HCN+R+LA R+ +DA ++LY+ +LL ++
Sbjct: 880 ------QGGLSVEEAARKHRLLDPALTDRVAEHCNERRLAARDAQDASLRLYLCVLLARQ 933
Score = 53.1 bits (126), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 163 HWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEGDFVL 222
H S ++ L+ G F+ R+N N EAY + G+ D+L+ G ++NRAVEGD V
Sbjct: 240 HLSPGDLSAGLKSGRLFRGRIRINPGNTAEAYVTVPGLPHDLLVRGELSRNRAVEGDEVA 299
Query: 223 IKVDRLSLW-AKMKG 236
++V + W K KG
Sbjct: 300 VQVQPPTAWFVKNKG 314
>gi|145352079|ref|XP_001420386.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580620|gb|ABO98679.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 962
Score = 299 bits (766), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 214/715 (29%), Positives = 335/715 (46%), Gaps = 120/715 (16%)
Query: 155 ARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNR 214
A +F + + E L G K R + +N EA+ EG VL++G AA NR
Sbjct: 214 ASASVFEAYLDANDIKEGLASGKLIKGGVRTSRYNPFEAHVMNEGTGEGVLLSGRAAMNR 273
Query: 215 AVEGDFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYS 274
A++GD V +++ S W + G + ED K S DV +
Sbjct: 274 AIDGDLVAVEILPESQWIRPGGMIITGTAEED---------------KETSSADVDAK-- 316
Query: 275 NCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAI 334
DD+ G P T+D T+ ++ + G+
Sbjct: 317 -------------DDA------------------GGLAPETADETDVAVAATKASGVV-- 343
Query: 335 ERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLS 394
PTG+VV II R+ R G +++ + + KG + L
Sbjct: 344 --------------PTGKVVGIIRRNWRERGYAASVDMGR--DGKGPTAAGGGFASRVLC 387
Query: 395 VP-DREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPF 453
VP DR ++PK+ + + L + +R + ID+W +S +
Sbjct: 388 VPSDR----------RFPKIRIQTRQLEGLLDQR------------IVVVIDDWPADSMY 425
Query: 454 PQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELL--SRKD 511
P+ H + G G V+ + A+L EN + F+P +C+P +PW+V + L R+D
Sbjct: 426 PEGHYVKSLGLIGSVDAETQALLLENDVDDRPFAPAVYACVPALPWKVTDDHLAEPGRED 485
Query: 512 LRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTS 571
LR+ + ++DP D+DDALS + D +GVHIADV+ F+ P TA+D EA R T+
Sbjct: 486 LRDLLVCSVDPPGCKDIDDALSARDIDDERIEIGVHIADVTSFLFPDTAMDEEAARRGTT 545
Query: 572 VYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI----GRTVIRSC 627
Y++QR++ MLP L+ ++ SL G +RLAFS FW + + + D + ++VI+S
Sbjct: 546 TYLVQRRLDMLPGALTTDICSLVGGQERLAFSAFWIVQKSTMLPDETVKPRFTKSVIKSA 605
Query: 628 CKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFT 687
L+YE AQ ID S N D+ S++ L +V++ L+ +R
Sbjct: 606 AALTYEQAQTRIDDA----SLN---------------DDLTLSLRRLRDVARQLRKRRMA 646
Query: 688 DGALRLENSKPVFLFDEYGT-PYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSA 746
+GAL L + + F D+ + P D + + N + EE MLLAN + AE I +A+P +A
Sbjct: 647 NGALTLASPEVRFEMDQQSSDPLDVGMYVTRETNQMVEEMMLLANVSTAERILQAYPAAA 706
Query: 747 LLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINY- 805
+LRRHP P + G+ +DT S+ SL+ A ++ + F+ L+
Sbjct: 707 MLRRHPIPEQKMFEPLLKAAKACGVDIDTQSNRTLAASLDAA---VRPEDAYFNTLLRLQ 763
Query: 806 ATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
ATR M A Y SG + + HY LA P+YTHFTSP+RRY D++VHR L+AA+
Sbjct: 764 ATRCMSQAVYCSSGQYA-GPERMHYGLAMPLYTHFTSPIRRYADVIVHRLLSAAI 817
>gi|54114933|gb|AAH26166.1| DIS3 mitotic control homolog (S. cerevisiae)-like 2 [Homo sapiens]
gi|71051508|gb|AAH36113.2| DIS3 mitotic control homolog (S. cerevisiae)-like 2 [Homo sapiens]
Length = 619
Score = 298 bits (762), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 197/564 (34%), Positives = 287/564 (50%), Gaps = 59/564 (10%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
IF + S E V+E L++G + + R+N EA+ D+ I G+ A+NRA+ G
Sbjct: 49 IFETYMSKEDVSEGLKRGTLIQGVLRINPKKFHEAFIPSPDGDRDIFIDGVVARNRALNG 108
Query: 219 DFVLIKVDRLSLWAKMKGFSNN--SSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNC 276
D V++K+ W +K SN+ + +S++P E G H KS D +
Sbjct: 109 DLVVVKLLPEEHWKVVKPESNDKETEAAYESDIPEELCGHHLPQQSLKSYND------SP 162
Query: 277 TLLSEKGIHHDDDSSSEAYNQEMIEREGYNYI----------NGHHPSTSDSTEKVSSSQ 326
++ E D Q ++ +G + +G P T D T +S
Sbjct: 163 DVIVEAQFDGSDSEDGHGITQNVL-VDGVKKLSVCVSEKGREDGDAPVTKDETTCISQDT 221
Query: 327 QNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDA 386
+ +++R + +VV I+E+ R GFL + A
Sbjct: 222 RALSEKSLQR-------------SAKVVYILEKKHSR-AATGFLKLL------------A 255
Query: 387 KKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDE 446
KN R+Y +P+ + P++ V +KD P R ++ T L RI +
Sbjct: 256 DKNSELF----RKYALFSPSDHRVPRIYVPLKDCPQDFVARPKDYANT----LFICRIVD 307
Query: 447 WNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEE 505
W E+ F + G+ GE+EP+ IL E + S FS E L CLP +PW +P EE
Sbjct: 308 WKEDCNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLECLPQGLPWTIPPEE 367
Query: 506 LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEA 565
R+DLR CIFTIDPSTA DLDDALS + L+DG +VGVHIADVSYFV G+ LD A
Sbjct: 368 FSKRRDLRKDCIFTIDPSTARDLDDALSCKPLADGNFKVGVHIADVSYFVPEGSDLDKVA 427
Query: 566 QVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIR 625
R+TSVY++Q+ +PMLP LL EE+ SLNP D+L FS+ W L G ++D W GRT+IR
Sbjct: 428 AERATSVYLVQKVVPMLPRLLCEELCSLNPMSDKLTFSVIWTLTPEGKILDEWFGRTIIR 487
Query: 626 SCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKR 685
SC KLSYEHAQ +I+ + + L P + + +V +++ +L+ ++K L+ +R
Sbjct: 488 SCTKLSYEHAQSMIESPTEKIPAKEL----PPISPEHSSEEVHQAVLNLHGIAKQLRQQR 543
Query: 686 FTDGALRLENSKPVFLFD-EYGTP 708
F DGALRL+ K F D E G P
Sbjct: 544 FVDGALRLDQLKLAFTLDHETGLP 567
>gi|302803941|ref|XP_002983723.1| hypothetical protein SELMODRAFT_180518 [Selaginella moellendorffii]
gi|300148560|gb|EFJ15219.1| hypothetical protein SELMODRAFT_180518 [Selaginella moellendorffii]
Length = 939
Score = 298 bits (762), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 248/826 (30%), Positives = 375/826 (45%), Gaps = 151/826 (18%)
Query: 145 KDDNPSHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDV 204
+D PS R I++ H M + + +G + RVN +N +AY E V ++
Sbjct: 210 EDSRPSK----RKIIYSEHKPMSEITAGIHQGIYHQGKLRVNRYNPFQAYVGSESVGDEI 265
Query: 205 LITGIAAQNRAVEGDFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGK 264
L+ G RL++ + F + +VE LP E
Sbjct: 266 LVQG------------------RLNM---NRAFDGDVVVVE--LLPHE------------ 290
Query: 265 SKVDVSYEYSNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSS 324
S++ + T+++E+ D D G P TSD
Sbjct: 291 -----SWQ-GDMTMIAEE---EDGDGDERV---------------GLAPDTSDE------ 320
Query: 325 SQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRK 384
+ N A E+ + +S + RP GRV+ II+R+ W Y GS +
Sbjct: 321 AAVNKADEASEKAT---TSGGSSRPNGRVIGIIKRN--------------WRAY-CGSLE 362
Query: 385 DAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARI 444
+ SV + ++ + PK+ + + + + KR + +
Sbjct: 363 PMTTPAGAGSVANALFVS---ADRRIPKIRIQTRQFGNLVDKR------------IVVSV 407
Query: 445 DEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQE 504
D W+ S +P H + G+ G+ + +L EN I FS + L+CLP +PW VP E
Sbjct: 408 DSWDLNSRYPSGHYVKTVGKIGDRNTESEVLLIENDINNRPFSDQVLACLPPLPWSVPAE 467
Query: 505 ELLS--RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALD 562
L R+DLRN +F++DP D+DDAL L G +VGVHIADV+ FV PGT LD
Sbjct: 468 ALHDPHREDLRNLRVFSVDPIGCKDIDDALHCTLLPTGNYQVGVHIADVTSFVHPGTPLD 527
Query: 563 IEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRT 622
IEA+ R TSVY+++R+I MLP L+E+V SL V+R FS+ W+++S D++ +
Sbjct: 528 IEARERGTSVYLVERRIDMLPKPLTEDVCSLRADVERFVFSVIWEMSSEADIISVRFTKG 587
Query: 623 VIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILK 682
VI+S LSY AQ +D D S+ L ++++ ++K+L+
Sbjct: 588 VIKSSAALSYVEAQARMD---DSRMSDPL----------------TTDLRNMNRLAKVLR 628
Query: 683 DKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARA 741
+R GAL L + + F D E P D + + N + EEFMLLAN + A+ I +
Sbjct: 629 QRRIERGALTLASPEVKFEIDTETHNPLDVGMYQVRESNHMVEEFMLLANISVAKKILSS 688
Query: 742 FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDI 801
FP +LLRRHP P + S G++LD +SS +L+ A + DD +
Sbjct: 689 FPVFSLLRRHPTPTPKMFEPLLKIASAVGIKLDITSSMTLANTLDLA---VGDDPYFNKL 745
Query: 802 LINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 861
+ ATR M A YFCSG+ ++ HY LA +YTHFTSP+RRY D++VHR L AAL+
Sbjct: 746 IRILATRCMTQAVYFCSGELS-PPEFQHYGLASAIYTHFTSPIRRYADVIVHRLLAAALD 804
Query: 862 AEKLYWKHR------RMLPKNNHRE---GVRGR----FLTGIFY-----DKDAAESLEGR 903
EKL R ++ N+R + GR T IF+ D DA
Sbjct: 805 LEKLSPSLRDKSEVTKIADNLNYRHRNAQMAGRASVELHTLIFFRNRPTDADARIVQIRS 864
Query: 904 EALSVAALKYGVPCADILVNVATHCN-----DRKLACRNVKDACVK 944
L V KYG+ LV+ A+ + + + C N +D K
Sbjct: 865 NGLIVFVPKYGIEGPVFLVDKASKSSTNWIMNEEQQCANARDGSTK 910
>gi|119591395|gb|EAW70989.1| hCG2013107, isoform CRA_d [Homo sapiens]
Length = 619
Score = 297 bits (761), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 197/564 (34%), Positives = 287/564 (50%), Gaps = 59/564 (10%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
IF + S E V+E L++G + + R+N EA+ D+ I G+ A+NRA+ G
Sbjct: 49 IFETYMSKEDVSEGLKRGTLIQGVLRINPKKFHEAFIPSPDGDRDIFIDGVVARNRALNG 108
Query: 219 DFVLIKVDRLSLWAKMKGFSNN--SSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNC 276
D V++K+ W +K SN+ + +S++P E G H KS D +
Sbjct: 109 DLVVVKLLPEEHWKVVKPESNDKETEAAYESDIPEELCGHHLPQQSLKSYND------SP 162
Query: 277 TLLSEKGIHHDDDSSSEAYNQEMIEREGYNYI----------NGHHPSTSDSTEKVSSSQ 326
++ E D Q ++ +G + +G P T D T +S
Sbjct: 163 DVIVEAQFDGSDSEDGHGITQNVL-VDGVKKLSVCVSEKGREDGDAPVTKDETTCISQDT 221
Query: 327 QNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDA 386
+ +++R + +VV I+E+ R GFL + A
Sbjct: 222 RALSEKSLQR-------------SAKVVYILEKKHSR-AATGFLKLL------------A 255
Query: 387 KKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDE 446
KN R+Y +P+ + P++ V +KD P R ++ T L RI +
Sbjct: 256 DKNSELF----RKYALFSPSDHRVPRIYVPLKDCPQDFVARPKDYANT----LFICRIVD 307
Query: 447 WNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEE 505
W E+ F + G+ GE+EP+ IL E + S FS E L CLP +PW +P EE
Sbjct: 308 WKEDCNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLECLPQGLPWTIPPEE 367
Query: 506 LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEA 565
R+DLR CIFTIDPSTA DLDDALS + L+DG +VGVHIADVSYFV G+ LD A
Sbjct: 368 FSKRRDLRKDCIFTIDPSTARDLDDALSCKPLADGNFKVGVHIADVSYFVPEGSDLDKVA 427
Query: 566 QVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIR 625
R+TSVY++Q+ +PMLP LL EE+ SLNP D+L FS+ W L G ++D W GRT+IR
Sbjct: 428 AERATSVYLVQKVVPMLPRLLCEELCSLNPMSDKLTFSVIWTLTPEGKILDEWFGRTIIR 487
Query: 626 SCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKR 685
SC KLSYEHAQ +I+ + + L P + + +V +++ +L+ ++K L+ +R
Sbjct: 488 SCTKLSYEHAQSMIESPTEKIPAKEL----PPISPEHSSEEVHQAVLNLHGIAKQLRQQR 543
Query: 686 FTDGALRLENSKPVFLFD-EYGTP 708
F DGALRL+ K F D E G P
Sbjct: 544 FVDGALRLDQLKLAFTLDHETGLP 567
>gi|157928154|gb|ABW03373.1| DIS3 mitotic control homolog (S. cerevisiae)-like 2 [synthetic
construct]
gi|157928854|gb|ABW03712.1| DIS3 mitotic control homolog (S. cerevisiae)-like 2 [synthetic
construct]
Length = 612
Score = 297 bits (761), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 197/564 (34%), Positives = 287/564 (50%), Gaps = 59/564 (10%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
IF + S E V+E L++G + + R+N EA+ D+ I G+ A+NRA+ G
Sbjct: 42 IFETYMSKEDVSEGLKRGTLIQGVLRINPKKFHEAFIPSPDGDRDIFIDGVVARNRALNG 101
Query: 219 DFVLIKVDRLSLWAKMKGFSNN--SSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNC 276
D V++K+ W +K SN+ + +S++P E G H KS D +
Sbjct: 102 DLVVVKLLPEEHWKVVKPESNDKETEAAYESDIPEELCGHHLPQQSLKSYND------SP 155
Query: 277 TLLSEKGIHHDDDSSSEAYNQEMIEREGYNYI----------NGHHPSTSDSTEKVSSSQ 326
++ E D Q ++ +G + +G P T D T +S
Sbjct: 156 DVIVEAQFDGSDSEDGHGITQNVL-VDGVKKLSVCVSEKGREDGDAPVTKDETTCISQDT 214
Query: 327 QNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDA 386
+ +++R + +VV I+E+ R GFL + A
Sbjct: 215 RALSEKSLQR-------------SAKVVYILEKKHSR-AATGFLKLL------------A 248
Query: 387 KKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDE 446
KN R+Y +P+ + P++ V +KD P R ++ T L RI +
Sbjct: 249 DKNSELF----RKYALFSPSDHRVPRIYVPLKDCPQDFVARPKDYANT----LFICRIVD 300
Query: 447 WNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEE 505
W E+ F + G+ GE+EP+ IL E + S FS E L CLP +PW +P EE
Sbjct: 301 WKEDCNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLECLPQGLPWTIPPEE 360
Query: 506 LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEA 565
R+DLR CIFTIDPSTA DLDDALS + L+DG +VGVHIADVSYFV G+ LD A
Sbjct: 361 FSKRRDLRKDCIFTIDPSTARDLDDALSCKPLADGNFKVGVHIADVSYFVPEGSDLDKVA 420
Query: 566 QVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIR 625
R+TSVY++Q+ +PMLP LL EE+ SLNP D+L FS+ W L G ++D W GRT+IR
Sbjct: 421 AERATSVYLVQKVVPMLPRLLCEELCSLNPMSDKLTFSVIWTLTPEGKILDEWFGRTIIR 480
Query: 626 SCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKR 685
SC KLSYEHAQ +I+ + + L P + + +V +++ +L+ ++K L+ +R
Sbjct: 481 SCTKLSYEHAQSMIESPTEKIPAKEL----PPISPEHSSEEVHQAVLNLHGIAKQLRQQR 536
Query: 686 FTDGALRLENSKPVFLFD-EYGTP 708
F DGALRL+ K F D E G P
Sbjct: 537 FVDGALRLDQLKLAFTLDHETGLP 560
>gi|119591391|gb|EAW70985.1| hCG2043065 [Homo sapiens]
Length = 665
Score = 297 bits (761), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 198/557 (35%), Positives = 285/557 (51%), Gaps = 45/557 (8%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
IF + S E V+E L++G + + R+N EA+ D+ I G+ A+NRA+ G
Sbjct: 49 IFETYMSKEDVSEGLKRGTLIQGVLRINPKKFHEAFIPSPDGDRDIFIDGVVARNRALNG 108
Query: 219 DFVLIKVDRLSLWAKMKGFSNN--SSIVEDSNLPTEANGMHSDICKGKS---KVDVSYEY 273
D V++K+ W +K SN+ + +S++P E G H KS DV E
Sbjct: 109 DLVVVKLLPEEHWKVVKPESNDKETEAAYESDIPEELCGHHLPQQSLKSYNDSPDVIVEA 168
Query: 274 SNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNA 333
SE G + + + + +G P T D T +S + +
Sbjct: 169 QFDGSDSEDGHGITQNVLVDGVKKLSVCVSEKGREDGDAPVTKDETTCISQDTRALSEKS 228
Query: 334 IERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSL 393
++R + +VV I+E+ R GFL + A KN
Sbjct: 229 LQR-------------SAKVVYILEKKHSR-AATGFLKLL------------ADKNSELF 262
Query: 394 SVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPF 453
R+Y +P+ + P++ V +KD P R ++ T L RI +W E+ F
Sbjct: 263 ----RKYALFSPSDHRVPRIYVPLKDCPQDFVARPKDYANT----LFICRIVDWKEDCNF 314
Query: 454 PQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEELLSRKDL 512
+ G+ GE+EP+ IL E + S FS E L CLP +PW +P EE R+DL
Sbjct: 315 ALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLECLPQGLPWTIPPEEFSKRRDL 374
Query: 513 RNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSV 572
R CIFTIDPSTA DLDDALS + L+DG +VGVHIADVSYFV G+ LD A R+TSV
Sbjct: 375 RKDCIFTIDPSTARDLDDALSCKPLADGNFKVGVHIADVSYFVPEGSDLDKVAAERATSV 434
Query: 573 YMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSY 632
Y++Q+ +PMLP LL EE+ SLNP D+L FS+ W L G ++D W GRT+IRSC KLSY
Sbjct: 435 YLVQKVVPMLPRLLCEELCSLNPMSDKLTFSVIWTLTPEGKILDEWFGRTIIRSCTKLSY 494
Query: 633 EHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALR 692
EHAQ +I+ + + L P + + +V +++ +L+ ++K L+ +RF DGALR
Sbjct: 495 EHAQSMIESPTEKIPAKEL----PPISPEHSSEEVHQAVLNLHGIAKQLRQQRFVDGALR 550
Query: 693 LENSKPVFLFD-EYGTP 708
L+ K F D E G P
Sbjct: 551 LDQLKLAFTLDHETGLP 567
>gi|302814738|ref|XP_002989052.1| hypothetical protein SELMODRAFT_129119 [Selaginella moellendorffii]
gi|300143153|gb|EFJ09846.1| hypothetical protein SELMODRAFT_129119 [Selaginella moellendorffii]
Length = 940
Score = 297 bits (761), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 210/630 (33%), Positives = 310/630 (49%), Gaps = 80/630 (12%)
Query: 342 SSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYI 401
+S + RP GRV+ II+R+ W Y GS + + SV + ++
Sbjct: 335 TSGGSSRPNGRVIGIIKRN--------------WRAY-CGSLEPMTTPAGAGSVANALFV 379
Query: 402 QLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHV 461
+ PK+ + + + + KR + +D W+ S +P H +
Sbjct: 380 S---ADRRIPKIRIQTRQFGNLVDKR------------IVVSVDSWDLNSRYPSGHYVKT 424
Query: 462 FGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLS--RKDLRNFCIFT 519
G+ G+ + + +L EN I FS + L+CLP +PW VP E L R+DLRN +F+
Sbjct: 425 VGKIGDRDTESEVLLIENDINNRPFSDQVLACLPPLPWSVPAEALHDPHREDLRNLRVFS 484
Query: 520 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 579
+DP D+DDAL L G +VGVHIADV+ FV PGT LDIEAQ R TSVY+++R+I
Sbjct: 485 VDPIGCKDIDDALHCTLLPTGNYQVGVHIADVTSFVHPGTPLDIEAQERGTSVYLVERRI 544
Query: 580 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDII 639
MLP L+E+V SL V+R FS+ W+++S D++ + VI+S LSY AQ +
Sbjct: 545 DMLPKPLTEDVCSLRADVERFVFSVIWEMSSEADIISVRFTKGVIKSSAALSYVEAQARM 604
Query: 640 DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPV 699
D D S+ L ++++ ++K+L+ +R GAL L + +
Sbjct: 605 D---DSRMSDPL----------------TTDLRNMNRLAKVLRQRRIERGALTLASPEVK 645
Query: 700 FLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRK 758
F D E P D + + N + EEFMLLAN + A+ I +FP +LLRRHP P +
Sbjct: 646 FEIDTETHNPLDVGMYQVRESNHMVEEFMLLANISVAKKILSSFPVFSLLRRHPTPTSKM 705
Query: 759 LREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCS 818
S G++LD +SS +L+ A + DD ++ ATR M A YFCS
Sbjct: 706 FEPLLKIASAVGIKLDITSSMTLANTLDLA---VGDDPYFNKLIRILATRCMTQAVYFCS 762
Query: 819 GDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR------RM 872
G+ ++ HY LA +YTHFTSP+RRY D++VHR L AAL+ EKL R ++
Sbjct: 763 GELS-PPEFQHYGLASAIYTHFTSPIRRYADVIVHRLLAAALDLEKLSPSLRDKSEVTKI 821
Query: 873 LPKNNHRE---GVRGR----FLTGIFY------DKDAAESLEGREALSVAALKYGVPCAD 919
N+R + GR T +F+ D DA L V KYG+
Sbjct: 822 ADNLNYRHRNAQMAGRASVELHTLMFFRNSRPTDADARIVQIRSNGLIVFVPKYGIEGPV 881
Query: 920 ILVNVATHCN-----DRKLACRNVKDACVK 944
LV+ A+ + D + C N +D K
Sbjct: 882 FLVDKASKSSTNWIMDEEQQCANARDGSSK 911
Score = 44.7 bits (104), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 145 KDDNPSHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDV 204
+D PS R I++ H M + + +G + RVN +N +AY E V ++
Sbjct: 210 EDSRPSK----RKIIYSEHKPMSEITAGIHQGIYHQGKLRVNRYNPFQAYVGSESVGDEI 265
Query: 205 LITGIAAQNRAVEGDFVLIKV 225
L+ G NRA +GD V++++
Sbjct: 266 LVQGRLNMNRAFDGDVVVVEL 286
>gi|170061188|ref|XP_001866127.1| exosome complex exonuclease RRP44 [Culex quinquefasciatus]
gi|167879528|gb|EDS42911.1| exosome complex exonuclease RRP44 [Culex quinquefasciatus]
Length = 1163
Score = 296 bits (758), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 173/464 (37%), Positives = 253/464 (54%), Gaps = 11/464 (2%)
Query: 399 EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHV 458
+YI+ +P K P M + + P++I K +E + A I EW+E+ P +
Sbjct: 557 QYIKFSPRDLKIPVMRIYKQHWPEAIFKN---DFKQLESVIYQAEIIEWHEDVPI--GTI 611
Query: 459 LHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIF 518
L G+ GE+E + A+L E + S +S E ++ LP P+++P+EEL R+DLR C+F
Sbjct: 612 LKSIGKCGELEAENQALLVEYDLDVSPYSEEIINSLPPSPFQIPEEELKKREDLREECVF 671
Query: 519 TIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRK 578
TIDP TA DLDDALS + L +G +GVHI+DVSYF+ G+ LD ++R+TS+YM+
Sbjct: 672 TIDPLTARDLDDALSCKVLKNGNFEIGVHISDVSYFLKEGSELDELVKLRATSIYMVDNV 731
Query: 579 IPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDI 638
MLP L + SL PG D+LAFS+FW++ V+ +TVI SC +L+YEHAQ +
Sbjct: 732 YHMLPKPLC-FLCSLLPGEDKLAFSVFWEITPDAKVLSTRFAKTVINSCTQLAYEHAQVM 790
Query: 639 IDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKP 698
+D + N + +P + + + + R + L ++ L+ +R +G +++ K
Sbjct: 791 LDKP----TENLRTDDFPPILHDYTPNYLSRIVNQLQSIAVQLRARRMENGCIKINQPKL 846
Query: 699 VFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMR 757
F D G P + N + E+FMLLAN + AE F D A+LR H AP+
Sbjct: 847 SFTLDPNTGKPTSYAVYELRTANQMIEDFMLLANSSVAEFTYSKFKDLAILRNHFAPSSP 906
Query: 758 KLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFC 817
+L +KHG L SS +S E +L +PM A YFC
Sbjct: 907 QLTNLAKLLAKHGHTLRHDSSKAIAESFETISNACPQPEAARAVLNIMMAKPMTRALYFC 966
Query: 818 SGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 861
S K D+ HYALA P+YTHFTSP+RRY D +VHR L AAL+
Sbjct: 967 SAFTKLPEDFFHYALAIPMYTHFTSPIRRYADCLVHRVLTAALD 1010
>gi|66800249|ref|XP_629050.1| hypothetical protein DDB_G0293614 [Dictyostelium discoideum AX4]
gi|60462398|gb|EAL60619.1| hypothetical protein DDB_G0293614 [Dictyostelium discoideum AX4]
Length = 1006
Score = 296 bits (757), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 192/540 (35%), Positives = 276/540 (51%), Gaps = 55/540 (10%)
Query: 327 QNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSR-KD 385
+N+G+ + A S K+PTG+VV II+R+ W Y G K
Sbjct: 311 ENEGVEEDDDSIAKDSLISKKQPTGKVVGIIKRN--------------WKPYCGAVEFKQ 356
Query: 386 AKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARID 445
N ++ + ++ P + PK+ + + + + I KR + ID
Sbjct: 357 DDNNTTTKTSTGLHFLYFMPIDKRIPKIRIKSRQVSNLIGKR------------IVVAID 404
Query: 446 EWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC--VPWEVPQ 503
+W++ S +P H + G G+ E + +L + I F + CLP + V
Sbjct: 405 QWDKNSKYPSGHFVKDLGPLGDKETESQVLLLQFDIPHHPFGAAVMKCLPSPDIMDRVTS 464
Query: 504 EELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDI 563
+++ RKDLR CIF++DP TD+DDAL I+ L GI VGVHIADVS+FV GTA+D
Sbjct: 465 ADMVGRKDLRKECIFSVDPPGCTDIDDALHIKDLGKGIMEVGVHIADVSHFVQEGTAIDE 524
Query: 564 EAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNS-AGDVVDRWIGRT 622
EA RSTSVY++ R+I MLP LS + SL VDR AFS W +N G+++ ++
Sbjct: 525 EAANRSTSVYLVDRRIDMLPGELSGNLCSLMSNVDRFAFSCIWKINQHTGEIIAVEYTKS 584
Query: 623 VIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILK 682
+IRSC L+YE AQ ID K S N + ++++L ++KIL+
Sbjct: 585 IIRSCASLTYEQAQIRIDDK----SQN---------------DQITVNLRNLNSLAKILR 625
Query: 683 DKRFTDGALRLENSKPVFLFDEY-GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARA 741
+RF GAL L + + F +E G P D + + N + EEFMLLAN A+ I +
Sbjct: 626 KQRFDRGALYLASPQVKFKTEELGGDPSDVEIYQLRETNSMIEEFMLLANIWVAKKIYKH 685
Query: 742 FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDI 801
FP A+LRRHP PN G + T++S SL+ A +K D Y F+
Sbjct: 686 FPGCAMLRRHPTPNKAAFDLLTKLIENKGYKFSTTTSKDLADSLDSAVDK-NDSY--FNT 742
Query: 802 LIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
L TR M A YF SG + D+ HY LA +YTHFTSP+RRYPD++VHR L +A+
Sbjct: 743 LCRIMTTRCMSPAKYFSSGSLPYE-DFNHYGLATDIYTHFTSPIRRYPDIIVHRLLASAI 801
Score = 47.4 bits (111), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%)
Query: 144 NKDDNPSHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTD 203
N D N E++ + H M + E ++ G + ++R + N EA ++ +
Sbjct: 214 NDDSNEKDNDESKRFQYQEHKPMSMLTEGIKGGKLIQGIFRTSITNYREATVSNREMEKE 273
Query: 204 VLITGIAAQNRAVEGDFVLIKVDRLSLW 231
+LI GI NRAV+GD V +++ S W
Sbjct: 274 ILIQGIENINRAVDGDIVAVELFDQSKW 301
>gi|145207992|ref|NP_082591.2| exosome complex exonuclease RRP44 [Mus musculus]
gi|166231533|sp|Q9CSH3.4|RRP44_MOUSE RecName: Full=Exosome complex exonuclease RRP44; AltName:
Full=Protein DIS3 homolog; AltName: Full=Ribosomal
RNA-processing protein 44
Length = 958
Score = 295 bits (756), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 189/523 (36%), Positives = 269/523 (51%), Gaps = 65/523 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 406
RPTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 340 RPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 376
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDAT-IEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ P++ R+E A+ +E + ID W S +P H + G
Sbjct: 377 DKRIPRI-------------RIETRQASALEGRRIIVAIDGWPRNSRYPNGHFVKNLGDV 423
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
GE E + +L E+ + FS LS LP +PW + +E++ +R+DLR+ C+ ++DP
Sbjct: 424 GEKETETEVLLLEHDVPHQPFSQAVLSFLPRMPWSITEEDMKNREDLRHLCVCSVDPPGC 483
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
TD+DDAL LS+G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 484 TDIDDALHCRELSNGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 543
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 544 LSSNLCSLRSNVDRLAFSCIWEMNHNAEILKTRFTKSVINSKASLTYAEAQMRID----- 598
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
S + + D+ S++ L +++KILK R GAL L + + F D E
Sbjct: 599 --SAAMND------------DITTSLRGLNQLAKILKKGRIEKGALTLSSPEIRFHMDSE 644
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 645 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYDILVK 704
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKD 823
LQ+ T ++ SL++A D+ + L+ ATR M A YFCSG
Sbjct: 705 AAKSKNLQIKTDTAKSLADSLDRAESP---DFPYLNTLLRILATRCMMQAVYFCSG---M 758
Query: 824 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
D D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 759 DNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTY 801
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEG---VQTDVLITGIAAQNRA 215
IF+ H + + + ++ G + +R + N LEA I G + ++LI GI NRA
Sbjct: 227 IFSEHLPLSKLQQGIKSGSYLQGTFRASRENYLEATVWIHGDKEEEKEILIQGIKHLNRA 286
Query: 216 VEGDFVLIKVDRLSLWA 232
V D V +++ S W
Sbjct: 287 VHEDIVAVELLPRSQWV 303
>gi|148668130|gb|EDL00460.1| RIKEN cDNA 2810028N01, isoform CRA_a [Mus musculus]
Length = 946
Score = 295 bits (756), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 189/523 (36%), Positives = 269/523 (51%), Gaps = 65/523 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 406
RPTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 328 RPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 364
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDAT-IEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ P++ R+E A+ +E + ID W S +P H + G
Sbjct: 365 DKRIPRI-------------RIETRQASALEGRRIIVAIDGWPRNSRYPNGHFVKNLGDV 411
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
GE E + +L E+ + FS LS LP +PW + +E++ +R+DLR+ C+ ++DP
Sbjct: 412 GEKETETEVLLLEHDVPHQPFSQAVLSFLPRMPWSITEEDMKNREDLRHLCVCSVDPPGC 471
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
TD+DDAL LS+G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 472 TDIDDALHCRELSNGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 531
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 532 LSSNLCSLRSNVDRLAFSCIWEMNHNAEILKTRFTKSVINSKASLTYAEAQMRID----- 586
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
S + + D+ S++ L +++KILK R GAL L + + F D E
Sbjct: 587 --SAAMND------------DITTSLRGLNQLAKILKKGRIEKGALTLSSPEIRFHMDSE 632
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 633 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYDILVK 692
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKD 823
LQ+ T ++ SL++A D+ + L+ ATR M A YFCSG
Sbjct: 693 AAKSKNLQIKTDTAKSLADSLDRAESP---DFPYLNTLLRILATRCMMQAVYFCSG---M 746
Query: 824 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
D D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 747 DNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTY 789
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEG---VQTDVLITGIAAQNRA 215
IF+ H + + + ++ G + +R + N LEA I G + ++LI GI NRA
Sbjct: 215 IFSEHLPLSKLQQGIKSGSYLQGTFRASRENYLEATVWIHGDKEEEKEILIQGIKHLNRA 274
Query: 216 VEGDFVLIKVDRLSLWA 232
V D V +++ S W
Sbjct: 275 VHEDIVAVELLPRSQWV 291
>gi|255561455|ref|XP_002521738.1| mitotic control protein dis3, putative [Ricinus communis]
gi|223539129|gb|EEF40725.1| mitotic control protein dis3, putative [Ricinus communis]
Length = 934
Score = 295 bits (755), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 185/523 (35%), Positives = 271/523 (51%), Gaps = 56/523 (10%)
Query: 346 TKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTP 405
+ RP+G VV II+R+ W +Y G S V Y
Sbjct: 335 STRPSGHVVGIIKRN--------------WHSYCGSLEPMPVPAGSGGLV----YALFVS 376
Query: 406 THPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ PK+ + + L + + KR+ +VA +D W+ +S +P H + G
Sbjct: 377 KDRRVPKIRIQTRQLQNLLDKRI----------IVA--VDSWDRQSRYPSGHYVRSIGEI 424
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLS--RKDLRNFCIFTIDPS 523
G+ + + +L EN I FS + L+CLP +PW V +E+L + R DLR+ +F++DP
Sbjct: 425 GDRDTETEVVLIENDIDARPFSAQVLACLPPLPWSVSEEDLANPIRTDLRHLLVFSVDPP 484
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
D+DDAL L G VGVHIADV+ FV P T LD EA R TSVY+++R+I MLP
Sbjct: 485 GCKDIDDALHCTMLPHGNFEVGVHIADVTNFVHPSTPLDDEATQRGTSVYLVERRIDMLP 544
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKF 643
L+E++ SL V+RLAFS+ W++ +++ ++VI+SC LSY AQ +D
Sbjct: 545 KPLTEDICSLRADVERLAFSVIWEMTPQAEIITTRYAKSVIKSCAALSYIEAQARMDDSR 604
Query: 644 DVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD 703
++ V + ++++ ++KI++ +R GAL L +++ F D
Sbjct: 605 LMDP-------------------VTKDLRNMNALAKIMRQRRIERGALTLASAEVKFQID 645
Query: 704 -EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
E P D + + N + EEFML AN + AE I + FP +LLRRHP P L
Sbjct: 646 TETHDPLDIGMYQIREANQMVEEFMLAANVSVAEQILKQFPGCSLLRRHPTPTKDMLEPL 705
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
+ GL LD SSS SL++A + DD ++ ATR M A YFCSGD
Sbjct: 706 LQTAASVGLTLDVSSSKALADSLDRA---VSDDPYFNKLIRIMATRCMTQAVYFCSGDLS 762
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 865
++ HY LA P+YTHFTSP+RRY D++VHR L A+L KL
Sbjct: 763 -PLEFHHYGLAAPLYTHFTSPIRRYADVIVHRLLAASLGIYKL 804
Score = 43.1 bits (100), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 35/76 (46%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R ++ H M + L G + RVN +N EAY E + +++I G NRA
Sbjct: 214 RKVVYPEHKPMSEITAGLTSGIYHQGKLRVNRYNPFEAYVGSESIGEEIVIYGRGNMNRA 273
Query: 216 VEGDFVLIKVDRLSLW 231
+GD V +++ W
Sbjct: 274 FDGDIVAVELLPQDQW 289
>gi|296189127|ref|XP_002742627.1| PREDICTED: exosome complex exonuclease RRP44 [Callithrix jacchus]
Length = 959
Score = 295 bits (755), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 192/522 (36%), Positives = 271/522 (51%), Gaps = 63/522 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 406
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 340 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 376
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ P++ R+E A T+E + ID W S +P H + G
Sbjct: 377 DKRIPRI-------------RIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVKNLGDV 423
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
GE E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ CI ++DP
Sbjct: 424 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWGITEKDMKNREDLRHLCICSVDPPGC 483
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 484 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 543
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS + SL VDRLAFS W++N + +++ ++VI S L+Y AQ ID
Sbjct: 544 LSSNLCSLKCDVDRLAFSCIWEMNHSAEILKTKFTKSVINSKASLTYAEAQLRID----- 598
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
S+N D+ S++ L +++KILK KR GAL L + + F D E
Sbjct: 599 -SANM-------------RDDITTSLRGLNKLAKILKKKRIEKGALTLSSPEVRFHMDSE 644
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 645 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 704
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 824
L++ T ++ +SL+QA E Y L +L ATR M A YFCSG D
Sbjct: 705 AARSRNLEIKTDTAKSLAESLDQA-ESPTFPY-LNTLLRILATRCMMQAVYFCSG---MD 759
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 760 NDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTY 801
>gi|148668131|gb|EDL00461.1| RIKEN cDNA 2810028N01, isoform CRA_b [Mus musculus]
Length = 781
Score = 295 bits (755), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 189/523 (36%), Positives = 269/523 (51%), Gaps = 65/523 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 406
RPTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 163 RPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 199
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDAT-IEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ P++ R+E A+ +E + ID W S +P H + G
Sbjct: 200 DKRIPRI-------------RIETRQASALEGRRIIVAIDGWPRNSRYPNGHFVKNLGDV 246
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
GE E + +L E+ + FS LS LP +PW + +E++ +R+DLR+ C+ ++DP
Sbjct: 247 GEKETETEVLLLEHDVPHQPFSQAVLSFLPRMPWSITEEDMKNREDLRHLCVCSVDPPGC 306
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
TD+DDAL LS+G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 307 TDIDDALHCRELSNGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 366
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 367 LSSNLCSLRSNVDRLAFSCIWEMNHNAEILKTRFTKSVINSKASLTYAEAQMRID----- 421
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
S + + D+ S++ L +++KILK R GAL L + + F D E
Sbjct: 422 --SAAMND------------DITTSLRGLNQLAKILKKGRIEKGALTLSSPEIRFHMDSE 467
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 468 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYDILVK 527
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKD 823
LQ+ T ++ SL++A D+ + L+ ATR M A YFCSG
Sbjct: 528 AAKSKNLQIKTDTAKSLADSLDRAESP---DFPYLNTLLRILATRCMMQAVYFCSG---M 581
Query: 824 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
D D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 582 DNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTY 624
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEG---VQTDVLITGIAAQNRA 215
IF+ H + + + ++ G + +R + N LEA I G + ++LI GI NRA
Sbjct: 50 IFSEHLPLSKLQQGIKSGSYLQGTFRASRENYLEATVWIHGDKEEEKEILIQGIKHLNRA 109
Query: 216 VEGDFVLIKVDRLSLWA 232
V D V +++ S W
Sbjct: 110 VHEDIVAVELLPRSQWV 126
>gi|291001707|ref|XP_002683420.1| exosome complex exonuclease RRP44 [Naegleria gruberi]
gi|284097049|gb|EFC50676.1| exosome complex exonuclease RRP44 [Naegleria gruberi]
Length = 1053
Score = 295 bits (755), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 198/562 (35%), Positives = 284/562 (50%), Gaps = 74/562 (13%)
Query: 308 INGHHP----STSDSTEK-VSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPR 362
+ +HP S SDS+EK ++SS + +N+ ERL PTG+VV II+R+
Sbjct: 353 LENNHPLTGTSESDSSEKSLTSSFYSRFVNS-ERLI----------PTGKVVGIIKRN-- 399
Query: 363 RDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPD 422
W +Y G +D S + P PK+ ++ + +
Sbjct: 400 ------------WRSYCGSLDEDTD------SEEGLNKVLFVPVDRCIPKIRIVSRQCKE 441
Query: 423 SIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAIC 482
+ KR + ID W+ S +P H + G + + IL E+ +
Sbjct: 442 LMNKR------------ICVMIDGWSVNSKYPDGHYISTIGEIYNTDTESEVILLEHDVP 489
Query: 483 CSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGIS 542
FS + CLP W+ ++++ R+DLR+ I ++DP TD+DDAL +L DG
Sbjct: 490 HYKFSQSIIDCLPPKDWQPTEKDMERRRDLRHLNIVSVDPPGCTDIDDALHAIQLPDGSI 549
Query: 543 RVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAF 602
+GVHIADV+ FV GTA+DIEA R T+VY++ R+I MLP LL+ + SL VDRLAF
Sbjct: 550 EIGVHIADVTNFVKEGTAIDIEAAKRGTTVYLVDRRIEMLPSLLTNNLCSLRQHVDRLAF 609
Query: 603 SIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQF 662
S+ W + GD+ +++IRS ++YE AQ +ID K E + L
Sbjct: 610 SVIWKFSPEGDIKSVDYTKSLIRSRKSMTYEEAQKVIDDK---ERDDELAT--------- 657
Query: 663 EWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNF 721
++ L ++SKILK KR G+L L + F + E P D L + N
Sbjct: 658 -------DLRLLMQISKILKKKRNEAGSLTLASPAVKFSMEAESSNPTDVELYQLRETNS 710
Query: 722 LFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQF 781
+ EEFMLLAN A+ I + FP A LRRHP N +K +HG+ LD SSS
Sbjct: 711 MVEEFMLLANIAVAKKITKEFPMVACLRRHPPVNPKKFEPLLEMLKRHGINLDISSSKIL 770
Query: 782 HQSLEQAREK--LKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYT 838
+++L R +KD Y+ D L+ TR M+ A YF SGD + W HY LA P+YT
Sbjct: 771 NETLSNIRSSGLIKDKYM--DTLVRIMVTRCMEQAVYFISGDCSQEEYW-HYGLAVPIYT 827
Query: 839 HFTSPLRRYPDLVVHRTLNAAL 860
HFTSP+RRY D++VHR L AA+
Sbjct: 828 HFTSPIRRYADVIVHRLLGAAI 849
>gi|118151430|ref|NP_001071624.1| DIS3-like exonuclease 1 [Bos taurus]
gi|117306266|gb|AAI26556.1| DIS3 mitotic control homolog (S. cerevisiae)-like [Bos taurus]
Length = 970
Score = 295 bits (755), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 186/522 (35%), Positives = 287/522 (54%), Gaps = 38/522 (7%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTGRVV I++++ RD +V F ++ + +G K+A+K I +TP
Sbjct: 247 PTGRVVGILQKN-WRDYVVTFPSIEE-VQSQG---KNAQK------------ILVTPWDY 289
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK I+ ++ +A + +V RID W S +P H + V GR G++
Sbjct: 290 RIPK-----------IRISTQQAEALQDFRVVV-RIDSWESTSMYPNGHFVRVLGRIGDL 337
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLR-NFCIFTIDPS 523
E +I IL EN+I FS + +P PW+V +E R+DLR +F+IDPS
Sbjct: 338 EGEIATILVENSISVVPFSEAQMCEMPVNTPENPWKVSSQEEREREDLRKTHLVFSIDPS 397
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
D+DD LS+ L +G +GVHIADV++FV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 398 GCEDVDDTLSVRALDNGNLELGVHIADVTHFVAPHSYIDIEARTRATTYYLADRRYDMLP 457
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLN-SAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
+LS +V SL GVDR A S+ W+L+ ++ ++ W GRT+IRS KL YE AQD++DG
Sbjct: 458 AILSADVCSLLGGVDRYAVSVMWELDKTSYEIKKVWYGRTIIRSAYKLFYEAAQDLLDGN 517
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
F V + + Q + ++V +I+ L ++++ ++ KR + GAL LE +
Sbjct: 518 FSVVKDIPEFKDLDEKSRQAKLEELVWAIRKLTDIARHIRAKRDSCGALELEGVEVRIQL 577
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
DE +D + +++ E M+LAN A+ I +FP ALLRRHP P+ E
Sbjct: 578 DEKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRRHPPPHQEFFSEL 637
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
G +DT S+ SL+ A + +D ++ +L + AT+ M A YF +G
Sbjct: 638 RECAKAKGFFIDTRSNKALADSLDNAND--PNDPIVNKLLRSMATQAMSNALYFSTGSCA 695
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
++ ++ HY LA YTHFTSP+RRY D++VHR L AA+ +K
Sbjct: 696 EE-EFHHYGLALDKYTHFTSPIRRYSDIIVHRLLMAAISKDK 736
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 46/86 (53%), Gaps = 8/86 (9%)
Query: 154 EARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHN-RLEAYCKIEGVQT-------DVL 205
E+ K + H +E + ++ G + VN H ++EA+ +++G + DVL
Sbjct: 136 ESHGKEYPEHVPLEVLEAGIKSGRYIQGTLNVNKHRAQIEAFVRLQGASSKDSDLVSDVL 195
Query: 206 ITGIAAQNRAVEGDFVLIKVDRLSLW 231
I G+ A+NR++ GD V++++ S W
Sbjct: 196 IHGMKARNRSIHGDVVVVELLPKSEW 221
>gi|296483673|tpg|DAA25788.1| TPA: DIS3-like exonuclease 1 [Bos taurus]
Length = 970
Score = 295 bits (754), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 186/522 (35%), Positives = 287/522 (54%), Gaps = 38/522 (7%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTGRVV I++++ RD +V F ++ + +G K+A+K I +TP
Sbjct: 247 PTGRVVGILQKN-WRDYVVTFPSIEE-VQSQG---KNAQK------------ILVTPWDY 289
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK I+ ++ +A + +V RID W S +P H + V GR G++
Sbjct: 290 RIPK-----------IRISTQQAEALQDFRVVV-RIDSWESTSMYPNGHFVRVLGRIGDL 337
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLR-NFCIFTIDPS 523
E +I IL EN+I FS + +P PW+V +E R+DLR +F+IDPS
Sbjct: 338 EGEIATILVENSISVVPFSEAQMCEMPVNTPENPWKVSSQEEREREDLRKTHLVFSIDPS 397
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
D+DD LS+ L +G +GVHIADV++FV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 398 GCEDVDDTLSVRALDNGNLELGVHIADVTHFVAPHSYIDIEARTRATTYYLADRRYDMLP 457
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLN-SAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
+LS +V SL GVDR A S+ W+L+ ++ ++ W GRT+IRS KL YE AQD++DG
Sbjct: 458 AILSADVCSLLGGVDRYAVSVMWELDKTSYEIKKVWYGRTIIRSAYKLFYEAAQDLLDGN 517
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
F V + + Q + ++V +I+ L ++++ ++ KR + GAL LE +
Sbjct: 518 FSVVKDIPEFKDLDEKSRQAKLEELVWAIRKLTDIARHIRAKRDSCGALELEGVEVRIQL 577
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
DE +D + +++ E M+LAN A+ I +FP ALLRRHP P+ E
Sbjct: 578 DEKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRRHPPPHQEFFSEL 637
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
G +DT S+ SL+ A + +D ++ +L + AT+ M A YF +G
Sbjct: 638 RECAKAKGFFIDTRSNKALADSLDNAND--PNDPIVNKLLRSMATQAMSNALYFSTGSCA 695
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
++ ++ HY LA YTHFTSP+RRY D++VHR L AA+ +K
Sbjct: 696 EE-EFHHYGLALDKYTHFTSPIRRYSDIIVHRLLMAAISKDK 736
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 46/86 (53%), Gaps = 8/86 (9%)
Query: 154 EARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHN-RLEAYCKIEGVQT-------DVL 205
E+ K + H +E + ++ G + VN H ++EA+ +++G + DVL
Sbjct: 136 ESHGKEYPEHVPLEVLEAGIKSGRYIQGTLNVNKHRAQIEAFVRLQGASSKDSDLVSDVL 195
Query: 206 ITGIAAQNRAVEGDFVLIKVDRLSLW 231
I G+ A+NR++ GD V++++ S W
Sbjct: 196 IHGMKARNRSIHGDVVVVELLPKSEW 221
>gi|52545700|emb|CAH56266.1| hypothetical protein [Homo sapiens]
Length = 958
Score = 295 bits (754), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 192/522 (36%), Positives = 271/522 (51%), Gaps = 63/522 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 406
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 340 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 376
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ P++ R+E A T+E + ID W S +P H + G
Sbjct: 377 DKRIPRI-------------RIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVRNLGDV 423
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
GE E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ CI ++DP
Sbjct: 424 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCICSVDPPGC 483
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 484 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 543
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 544 LSSNLCSLKCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTYAEAQLRID----- 598
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
S+N D+ S++ L +++KILK +R GAL L +S+ F D E
Sbjct: 599 -SANM-------------NDDITTSLRGLNKLAKILKKRRIEKGALTLSSSEVRFHMDSE 644
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 645 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 704
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 824
L++ T ++ +SL+QA E Y L +L ATR M A YFCSG D
Sbjct: 705 AARSRNLEIKTDTAKSLAESLDQA-ESPTFPY-LNTLLRILATRCMMQAVYFCSG---MD 759
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 760 NDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTY 801
>gi|426233851|ref|XP_004010923.1| PREDICTED: DIS3-like exonuclease 1 [Ovis aries]
Length = 1111
Score = 295 bits (754), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 188/522 (36%), Positives = 285/522 (54%), Gaps = 38/522 (7%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTGRVV I++++ RD +V F ++ + +G K+A+K I +TP
Sbjct: 388 PTGRVVGILQKN-WRDYVVTFPSIEE-VQSQG---KNAQK------------ILVTPWDY 430
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK I+ ++ +A + +V RID W S +P H + V GR G++
Sbjct: 431 RIPK-----------IRISTQQAEALQDFRVVV-RIDSWESTSMYPNGHFVRVLGRIGDL 478
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLR-NFCIFTIDPS 523
E +I IL EN I FS + +P PW+V +E RKDLR +F+IDPS
Sbjct: 479 EGEIATILVENNISVVPFSEAQMCEMPVNTPENPWKVNSQEERERKDLRKTHLVFSIDPS 538
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
D+DD LS+ L +G +GVHIADV+YFV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 539 GCEDVDDTLSVRALDNGNLELGVHIADVTYFVAPHSYVDIEARTRATTYYLADRRYDMLP 598
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLN-SAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
+LS +V SL GVDR A S+ W+L+ ++ ++ W GRT+IRS KL YE AQD++DG
Sbjct: 599 AILSADVCSLLGGVDRYAVSVMWELDKTSYEIKKVWYGRTIIRSAYKLFYEAAQDLLDGN 658
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
F V + + Q + ++V +I+ L ++++ ++ KR GAL LE +
Sbjct: 659 FSVVKDIPEFKDLDEKSRQAKLEELVWAIRKLTDIARHIRAKRDRCGALELEGVEVRIQL 718
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
DE +D + +++ E M+LAN A+ I +FP ALLRRHP P+ E
Sbjct: 719 DEKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRRHPPPHQEFFSEL 778
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
G +DT S+ SL+ A + +D ++ +L + AT+ M A YF +G
Sbjct: 779 RECAKAKGFFIDTRSNKALADSLDNAND--PNDPIVNKLLRSMATQAMSNALYFSTGSCA 836
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
++ ++ HY LA YTHFTSP+RRY D++VHR L AA+ +K
Sbjct: 837 EE-EFHHYGLALDKYTHFTSPIRRYSDIIVHRLLMAAISEDK 877
Score = 44.3 bits (103), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 46/86 (53%), Gaps = 8/86 (9%)
Query: 154 EARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHN-RLEAYCKIEGVQT-------DVL 205
E+ K + H +E + ++ G + VN H ++EA+ +++G + DVL
Sbjct: 277 ESHGKEYPEHVPLEVLEAGIKSGRYVQGTLNVNKHRAQIEAFVRLQGASSKDSDLVSDVL 336
Query: 206 ITGIAAQNRAVEGDFVLIKVDRLSLW 231
I G+ A+NR++ GD V++++ S W
Sbjct: 337 IHGMKARNRSIHGDVVVVELLPKSEW 362
>gi|440908050|gb|ELR58117.1| DIS3-like exonuclease 1, partial [Bos grunniens mutus]
Length = 1008
Score = 295 bits (754), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 186/518 (35%), Positives = 286/518 (55%), Gaps = 38/518 (7%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTGRVV I++++ RD +V F ++ + +G K+A+K I +TP
Sbjct: 285 PTGRVVGILQKN-WRDYVVTFPSIEE-VQSQG---KNAQK------------ILVTPWDY 327
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK I+ ++ +A + +V RID W S +P H + V GR G++
Sbjct: 328 RIPK-----------IRISTQQAEALQDFRVVV-RIDSWESTSMYPNGHFVRVLGRIGDL 375
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLR-NFCIFTIDPS 523
E +I IL EN+I FS + +P PW+V +E R+DLR +F+IDPS
Sbjct: 376 EGEIATILVENSISVVPFSEAQMCEMPVNTPENPWKVSSQEEREREDLRKTHLVFSIDPS 435
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
D+DDALS+ L +G +GVHIADV++FV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 436 GCEDVDDALSVRALDNGNLELGVHIADVTHFVAPHSYIDIEARTRATTYYLADRRYDMLP 495
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLN-SAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
+LS +V SL GVDR A S+ W+L+ ++ ++ W GRT+IRS KL YE AQD++DG
Sbjct: 496 AILSADVCSLLGGVDRYAVSVMWELDKTSYEIKKVWYGRTIIRSAYKLFYEAAQDLLDGN 555
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
F V + + Q + ++V +I+ L ++++ ++ KR + GAL LE +
Sbjct: 556 FSVVKDIPEFKDLDEKSRQAKLEELVWAIRKLTDIARHIRAKRDSCGALELEGVEVRIQL 615
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
DE +D + +++ E M+LAN A+ I +FP ALLRRHP P+ E
Sbjct: 616 DEKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRRHPPPHQEFFSEL 675
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
G +DT S+ SL+ A + +D ++ +L + AT+ M A YF +G
Sbjct: 676 RECAKAKGFFIDTRSNKALADSLDNAND--PNDPIVNKLLRSMATQAMSNALYFSTGSCA 733
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
++ ++ HY LA YTHFTSP+RRY D++VHR L AA+
Sbjct: 734 EE-EFHHYGLALDKYTHFTSPIRRYSDIIVHRLLMAAI 770
Score = 45.1 bits (105), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 71/149 (47%), Gaps = 13/149 (8%)
Query: 94 MPTMHINEEESA--ESGSTQSQLLLATDLCGSIISRSCPEPIANDSSCWA-YTNKDDNPS 150
MP + + E+E A + GS + + + + + P+ A C + ++ + +
Sbjct: 113 MPIVMVTEDEEAIQQYGSETGGVFVIS--FKNYLDNFWPDLKAAHELCESILQSRREREN 170
Query: 151 HQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHN-RLEAYCKIEGVQT------- 202
E+ K + H +E + ++ G + VN H ++EA+ +++G +
Sbjct: 171 ESQESHGKEYPEHVPLEVLEAGIKSGRYIQGTLNVNKHRAQIEAFVRLQGASSKDSDLVS 230
Query: 203 DVLITGIAAQNRAVEGDFVLIKVDRLSLW 231
DVLI G+ A+NR++ GD V++++ S W
Sbjct: 231 DVLIHGMKARNRSIHGDVVVVELLPKSEW 259
>gi|320169827|gb|EFW46726.1| mitotic control protein dis3 [Capsaspora owczarzaki ATCC 30864]
Length = 1191
Score = 295 bits (754), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 220/741 (29%), Positives = 344/741 (46%), Gaps = 118/741 (15%)
Query: 146 DDNPSHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVL 205
DD P+ + R + H + + ++ G ++ + +VN N LEA + + T +L
Sbjct: 237 DDTPARAAGMRAN-YPEHLTTAKLLTGVKLGLYYQGVLQVNRDNPLEASVRARSMDTPIL 295
Query: 206 ITGIAAQNRAVEGDFVLIKVDRLSLW----AKMKGFSNNSSIVEDSNLPTEANGMHSDIC 261
+ G A +RA++ D V++K+ S W ++ + + + +P +
Sbjct: 296 VHGRLAMSRAMQDDVVIVKLLPQSQWLTPSTQLLEDESAEADDAAAEMPDDEQ------- 348
Query: 262 KGKSKVDVSYEYSNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEK 321
SE DD+ S A + E I +++ + E+
Sbjct: 349 ------------------SESDEDEPDDAESAALDAEAI-------------ASTVADEQ 377
Query: 322 VSSSQQNDGMNAIERLSAMI-SSYPTKRPTGRVVSIIERSPRRD-GIVGFLNVNQWFNYK 379
+ ++ D SA++ SS +RPTG VV I+ R+ R G+V + +
Sbjct: 378 AAVAEAVD--------SAVVGSSSDARRPTGIVVGILRRAWRPSCGMV----IPVESDSN 425
Query: 380 GGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMEL 439
G S + + PT ++P + V + +++R
Sbjct: 426 GPSSDNGPTQ-----------LLFVPTDTRFPHVRVQTRRPQAYLEQR------------ 462
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 499
V ID W+ S P+ H++ G GE + +L E+ + S FSP L+ LP +PW
Sbjct: 463 VVVTIDRWHRGSRLPEGHLVRALGPIGEKMTETEVLLVEHEVRHSDFSPAVLADLPVLPW 522
Query: 500 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 559
+ + + +R+D + I ++DP TD+DDAL + L +G VGVHIADVS+F+ P T
Sbjct: 523 VITEADRAARRDFTHLDICSVDPPGCTDIDDALHVRPLENGNWEVGVHIADVSHFIKPNT 582
Query: 560 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAG------- 612
A+D+EA R TSVY++ R+I M+P LL E+ SL V+R A S+ W++ G
Sbjct: 583 AIDLEAARRGTSVYLIGRRIDMIPELLGTELCSLQSDVERFAMSVVWEITPPGKPDPVDG 642
Query: 613 ------DVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSD 666
++V R++IRS L+Y AQ +ID D + L G
Sbjct: 643 ACRTGAEIVRTEYCRSIIRSRASLTYMQAQTMID---DQTRRDPLSHG------------ 687
Query: 667 VVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEE 725
++ L E+SK+L+ +R G L LE+ + F D + P D + + EE
Sbjct: 688 ----LRGLNELSKVLRQRRLDRGTLTLESPEISFSLDKDTSDPVDVGAKQKLQTMSMVEE 743
Query: 726 FMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSL 785
FMLLAN AE I R FP A+LRRHP P +HG+++ S+S + +SL
Sbjct: 744 FMLLANVAVAEHIFRRFPQCAVLRRHPVPPQASFEPLVVAARQHGVEIKASNSKELAESL 803
Query: 786 EQARE---KLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTS 842
++A E K Y L +L ATR M A YFCSG + HY LA P+YTHFTS
Sbjct: 804 DRAEESFGKAGKPY-LGKLLRILATRCMMQAVYFCSGTLP-TREHQHYGLACPIYTHFTS 861
Query: 843 PLRRYPDLVVHRTLNAALEAE 863
P+RRYPD++VHR L A+ E
Sbjct: 862 PIRRYPDVLVHRLLAVAIGLE 882
>gi|118363036|ref|XP_001014739.1| RNB-like protein [Tetrahymena thermophila]
gi|89296510|gb|EAR94498.1| RNB-like protein [Tetrahymena thermophila SB210]
Length = 946
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 194/593 (32%), Positives = 298/593 (50%), Gaps = 67/593 (11%)
Query: 301 EREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERS 360
E E ++ N H ++++ K + +N +E++ + PTGRVV +I+R
Sbjct: 302 EDEEEDFKNVHEAVKTNNSNK---QLEEKYLNVVEKIKKL-----NLNPTGRVVGVIKRI 353
Query: 361 PRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSL--SVPDREYIQLTPTHPKYPKMVVLVK 418
R Y G N +L + RE+I P ++P +
Sbjct: 354 QR---------------YFCGEVTPEAINLPNLPSGIELREFI---PADGRFPHFYLRTT 395
Query: 419 DLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYE 478
+ K+++ G D W++ S +P H + G G+ + + + IL E
Sbjct: 396 NGSQLQGKKIQIG------------FDNWSKSSKYPLGHFKMLIGDSGDTKAEGDVILLE 443
Query: 479 NAICCSGFSPESLSCLPCV--PWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIER 536
+ + FS + L CLP W++PQ E+ R DLR + +IDP D+DDAL
Sbjct: 444 HNVEYRAFSKQVLDCLPPQDDKWQIPQSEIKKRVDLRGINVCSIDPPGCKDIDDALHCIS 503
Query: 537 LSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPG 596
L +G VGVHIADVSYFV P TA+D EAQ R T+VY++ R+ MLP LL+E + SL
Sbjct: 504 LPNGNFEVGVHIADVSYFVRPDTAIDKEAQNRCTTVYLVDRRTDMLPKLLTETLCSLKDD 563
Query: 597 VDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWP 656
DRLAFS+ W ++ ++++ +++IRS L+Y AQ +ID DV +
Sbjct: 564 GDRLAFSVVWVMDKDANIIETRYHKSIIRSVASLNYGKAQSMID---DVNDN-------- 612
Query: 657 QLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF-DEYGTPYDSVLSG 715
S++ +SI++L ++K LK KR +GAL L +++ F F DE P D
Sbjct: 613 --------SELTKSIRNLNMLAKKLKQKRIENGALSLASTQVKFTFDDETHNPVDVQFYQ 664
Query: 716 REDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDT 775
+ N L EEFMLL N AE I FP ++LR+H P ++++E K G LD
Sbjct: 665 MYETNSLIEEFMLLGNVAVAEKIVSHFPSISILRQHSQPKPKQIKELSQILQKIGFNLDY 724
Query: 776 SSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFP 835
SS+ SL++ +D+ ++ TR M A+YFC+ D D ++ HY LA P
Sbjct: 725 SSNRNLADSLDKVNR--PNDHFFNKLVRIMTTRSMNEATYFCTAD-ADYPEFYHYGLAAP 781
Query: 836 VYTHFTSPLRRYPDLVVHRTLNAALEAEKL--YWKHRRMLPKNNHREGVRGRF 886
+YTHFTSP+RRY D++VHR L AA++ E + Y ++ + K + +R R
Sbjct: 782 LYTHFTSPIRRYADVLVHRLLAAAIDIEAIPAYMSNKLKMAKICEKMNMRNRM 834
>gi|149050096|gb|EDM02420.1| similar to mitotic control protein dis3 homolog (predicted) [Rattus
norvegicus]
Length = 939
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 189/522 (36%), Positives = 270/522 (51%), Gaps = 63/522 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 406
RPTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 321 RPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 357
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDAT-IEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ P++ R+E A+ +E + ID W S +P H + G
Sbjct: 358 DKRIPRI-------------RIETRQASALEGRRIIVAIDGWPRNSRYPNGHFVKNLGDV 404
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
GE E + +L E+ + FS LS LP +PW + +E++ +R+DLR+ C+ ++DP
Sbjct: 405 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEEDMKNREDLRHLCVCSVDPPGC 464
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
TD+DDAL LS+G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 465 TDIDDALHCRELSNGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 524
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 525 LSSNLCSLRSNVDRLAFSCIWEMNHNAEILKTRFTKSVINSKASLTYAEAQMRID----- 579
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
S + + D+ S++ L +++KILK R GAL L + + F D E
Sbjct: 580 --SAAMND------------DITTSLRGLNKLAKILKRGRIEKGALTLSSPEIRFHMDSE 625
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 626 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEVLVK 685
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 824
L++ T ++ SL++A + D L +L ATR M A YFCSG D
Sbjct: 686 AAKSKNLEIRTDTAKSLADSLDRA--ECPDFPYLNTLLRILATRCMMQAVYFCSG---MD 740
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
+D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 741 SDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTY 782
Score = 41.6 bits (96), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTD---VLITGIAAQNRA 215
IF+ H + + + ++ G + +R + N LEA I G + D +LI G+ NRA
Sbjct: 208 IFSEHLPLSKLQQGIKSGSYLQGTFRASRENYLEATVWIHGDKEDEKEILIQGLKHLNRA 267
Query: 216 VEGDFVLIKVDRLSLWA 232
+ D V +++ S W
Sbjct: 268 IHEDIVAVELLPKSQWV 284
>gi|26327903|dbj|BAC27692.1| unnamed protein product [Mus musculus]
Length = 687
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 189/523 (36%), Positives = 269/523 (51%), Gaps = 65/523 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 406
RPTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 69 RPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 105
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDAT-IEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ P++ R+E A+ +E + ID W S +P H + G
Sbjct: 106 DKRIPRI-------------RIETRQASALEGRRIIVAIDGWPRNSRYPNGHFVKNLGDV 152
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
GE E + +L E+ + FS LS LP +PW + +E++ +R+DLR+ C+ ++DP
Sbjct: 153 GEKETETEVLLLEHDVPHQPFSQAVLSFLPRMPWSITEEDMKNREDLRHLCVCSVDPPGC 212
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
TD+DDAL LS+G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 213 TDIDDALHCRELSNGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 272
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 273 LSSNLCSLRSNVDRLAFSCIWEMNHNAEILKTRFTKSVINSKASLTYAEAQMRID----- 327
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
S + + D+ S++ L +++KILK R GAL L + + F D E
Sbjct: 328 --SAAMND------------DITTSLRGLNQLAKILKKGRIEKGALTLSSPEIRFHMDSE 373
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 374 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYDILVK 433
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKD 823
LQ+ T ++ SL++A D+ + L+ ATR M A YFCSG
Sbjct: 434 AAKSKNLQIKTDTAKSLADSLDRAESP---DFPYLNTLLRILATRCMMQAVYFCSG---M 487
Query: 824 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
D D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 488 DNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTY 530
>gi|410900646|ref|XP_003963807.1| PREDICTED: exosome complex exonuclease RRP44-like [Takifugu
rubripes]
Length = 947
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 193/540 (35%), Positives = 281/540 (52%), Gaps = 71/540 (13%)
Query: 347 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 406
++PTG+VV II+R+ R G LNV+Q K +R TP
Sbjct: 333 QKPTGKVVGIIKRNWR--PFCGMLNVSQ---IKESTRH-----------------LFTPA 370
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDAT-IEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ P++ R+E A+ + + + ID W + S +P H + G+
Sbjct: 371 ERRIPRI-------------RIETRQASALAGQRIMVAIDGWPKHSRYPNGHFVRSLGKA 417
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
GE + + +L E+ + FS LS LP +PW + E+L R+DLR+ + ++DP
Sbjct: 418 GEKDTEQEVLLLEHDVPHQPFSQAVLSFLPKMPWAITPEDLEKREDLRHLTVCSVDPPGC 477
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
TD+DDAL L DG VGVHIADVS+F+ PG ALD EA R T+VY+ R+I M+P L
Sbjct: 478 TDIDDALHCRELEDGTLEVGVHIADVSHFIRPGNALDSEAANRGTTVYLCGRRIDMVPEL 537
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS + SL VDR AFS W+LN +++ ++VI S L+Y AQ ID
Sbjct: 538 LSSNLCSLRSNVDRFAFSCIWELNQKSEILKTRFTKSVINSKASLTYAEAQMRID----- 592
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
+S+ ++ +S++ L +++KILK +R +GAL L + + F D E
Sbjct: 593 DSTKN--------------DNITKSLRGLNKLAKILKKRRIENGALTLSSLEVRFHIDSE 638
Query: 705 YGTPYDSVLSGREDL--NFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
P D L +E L N + EEFMLLAN + A+ I FPD A+LR+HPAP
Sbjct: 639 THDPID--LQAKELLETNSMVEEFMLLANISVAQKIYDEFPDCAMLRKHPAPPPSNYDIL 696
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDF 821
+++ T S+ SL++A + ++ F+ L+ ATR M A YFCSG
Sbjct: 697 HKASKSQNVEIHTDSAKALAYSLDKAS---VEGFLYFNTLLRILATRCMMQAVYFCSG-- 751
Query: 822 KDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYW----KHRRMLPKNN 877
D+D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y KH++ NN
Sbjct: 752 -MDSDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADTTYPDLMDKHKQSALSNN 810
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGV---QTDVLITGIAAQNRA 215
+FA H + + ++ G + +R + N LEA + G T+VLI G+ NRA
Sbjct: 225 LFAEHLPLSVIQTGIKNGSLLQGTFRASRDNYLEATVFVHGGGEDATEVLIQGLQNLNRA 284
Query: 216 VEGDFVLIKVDRLSLWA 232
V D V +++ S W
Sbjct: 285 VHQDVVAVQLLPQSQWV 301
>gi|166201910|sp|A0JN80.2|DI3L1_BOVIN RecName: Full=DIS3-like exonuclease 1
Length = 1053
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 186/522 (35%), Positives = 287/522 (54%), Gaps = 38/522 (7%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTGRVV I++++ RD +V F ++ + +G K+A+K I +TP
Sbjct: 330 PTGRVVGILQKN-WRDYVVTFPSIEE-VQSQG---KNAQK------------ILVTPWDY 372
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK I+ ++ +A + +V RID W S +P H + V GR G++
Sbjct: 373 RIPK-----------IRISTQQAEALQDFRVVV-RIDSWESTSMYPNGHFVRVLGRIGDL 420
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLR-NFCIFTIDPS 523
E +I IL EN+I FS + +P PW+V +E R+DLR +F+IDPS
Sbjct: 421 EGEIATILVENSISVVPFSEAQMCEMPVNTPENPWKVSSQEEREREDLRKTHLVFSIDPS 480
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
D+DD LS+ L +G +GVHIADV++FV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 481 GCEDVDDTLSVRALDNGNLELGVHIADVTHFVAPHSYIDIEARTRATTYYLADRRYDMLP 540
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLN-SAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
+LS +V SL GVDR A S+ W+L+ ++ ++ W GRT+IRS KL YE AQD++DG
Sbjct: 541 AILSADVCSLLGGVDRYAVSVMWELDKTSYEIKKVWYGRTIIRSAYKLFYEAAQDLLDGN 600
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
F V + + Q + ++V +I+ L ++++ ++ KR + GAL LE +
Sbjct: 601 FSVVKDIPEFKDLDEKSRQAKLEELVWAIRKLTDIARHIRAKRDSCGALELEGVEVRIQL 660
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
DE +D + +++ E M+LAN A+ I +FP ALLRRHP P+ E
Sbjct: 661 DEKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRRHPPPHQEFFSEL 720
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
G +DT S+ SL+ A + +D ++ +L + AT+ M A YF +G
Sbjct: 721 RECAKAKGFFIDTRSNKALADSLDNAND--PNDPIVNKLLRSMATQAMSNALYFSTGSCA 778
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
++ ++ HY LA YTHFTSP+RRY D++VHR L AA+ +K
Sbjct: 779 EE-EFHHYGLALDKYTHFTSPIRRYSDIIVHRLLMAAISKDK 819
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 46/86 (53%), Gaps = 8/86 (9%)
Query: 154 EARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHN-RLEAYCKIEGVQT-------DVL 205
E+ K + H +E + ++ G + VN H ++EA+ +++G + DVL
Sbjct: 219 ESHGKEYPEHVPLEVLEAGIKSGRYIQGTLNVNKHRAQIEAFVRLQGASSKDSDLVSDVL 278
Query: 206 ITGIAAQNRAVEGDFVLIKVDRLSLW 231
I G+ A+NR++ GD V++++ S W
Sbjct: 279 IHGMKARNRSIHGDVVVVELLPKSEW 304
>gi|188595648|ref|NP_001120955.1| exosome complex exonuclease RRP44 [Rattus norvegicus]
gi|187469071|gb|AAI66824.1| Dis3 protein [Rattus norvegicus]
Length = 957
Score = 294 bits (753), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 189/522 (36%), Positives = 270/522 (51%), Gaps = 63/522 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 406
RPTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 339 RPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 375
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDAT-IEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ P++ R+E A+ +E + ID W S +P H + G
Sbjct: 376 DKRIPRI-------------RIETRQASALEGRRIIVAIDGWPRNSRYPNGHFVKNLGDV 422
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
GE E + +L E+ + FS LS LP +PW + +E++ +R+DLR+ C+ ++DP
Sbjct: 423 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEEDMKNREDLRHLCVCSVDPPGC 482
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
TD+DDAL LS+G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 483 TDIDDALHCRELSNGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 542
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 543 LSSNLCSLRSNVDRLAFSCIWEMNHNAEILKTRFTKSVINSKASLTYAEAQMRID----- 597
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
S + + D+ S++ L +++KILK R GAL L + + F D E
Sbjct: 598 --SAAMND------------DITTSLRGLNKLAKILKRGRIEKGALTLSSPEIRFHMDSE 643
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 644 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEVLVK 703
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 824
L++ T ++ SL++A + D L +L ATR M A YFCSG D
Sbjct: 704 AAKSKNLEIRTDTAKSLADSLDRA--ECPDFPYLNTLLRILATRCMMQAVYFCSG---MD 758
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
+D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 759 SDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTY 800
Score = 41.6 bits (96), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTD---VLITGIAAQNRA 215
IF+ H + + + ++ G + +R + N LEA I G + D +LI G+ NRA
Sbjct: 226 IFSEHLPLSKLQQGIKSGSYLQGTFRASRENYLEATVWIHGDKEDEKEILIQGLKHLNRA 285
Query: 216 VEGDFVLIKVDRLSLWA 232
+ D V +++ S W
Sbjct: 286 IHEDIVAVELLPKSQWV 302
>gi|354474493|ref|XP_003499465.1| PREDICTED: exosome complex exonuclease RRP44-like [Cricetulus
griseus]
Length = 1070
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 192/537 (35%), Positives = 274/537 (51%), Gaps = 65/537 (12%)
Query: 335 ERLSAMISSYPTK--RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRS 391
ER A+ ++ K RPTGRVV II+R+ W Y G S+ K++R
Sbjct: 437 ERQLALKTAVSEKMLRPTGRVVGIIKRN--------------WRPYCGMLSKSGIKESRR 482
Query: 392 SLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEE 450
L TP + P++ R+E A T+E + +D W
Sbjct: 483 HL---------FTPADKRIPRI-------------RIETRQASTLEGRRIIVAVDGWPRN 520
Query: 451 SPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRK 510
S +P H + G GE E + +L E+ + FS LS LP +PW + + ++ +R+
Sbjct: 521 SRYPNGHFVKNLGDVGEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITENDMKNRE 580
Query: 511 DLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRST 570
DLR+ C+ ++DP TD+DDAL LS+G VGVHIADVS+F+ PG ALD E+ R T
Sbjct: 581 DLRHLCVCSVDPPGCTDIDDALHCRELSNGNLEVGVHIADVSHFIRPGNALDQESARRGT 640
Query: 571 SVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKL 630
+VY+ +++I M+P LLS + SL VDRLAFS W++N +++ ++VI S L
Sbjct: 641 TVYLCEKRIDMVPELLSSNLCSLRSNVDRLAFSCIWEMNHNAEILKTRFTKSVINSKASL 700
Query: 631 SYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGA 690
+Y AQ ID S + + D+ S++ L +++KILK R GA
Sbjct: 701 TYAEAQMRID-------SAAMND------------DITTSLRGLNKLAKILKKGRIEKGA 741
Query: 691 LRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLR 749
L L + + F D E P D + N + EEFMLLAN + A+ I F + ALLR
Sbjct: 742 LTLSSPEVRFHMDSETHDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLR 801
Query: 750 RHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRP 809
+HPAP L++ T ++ SL+QA + D L +L ATR
Sbjct: 802 KHPAPPPSNYEILVKAAKSKNLEIKTDTAKSLADSLDQA--ECPDFPYLNTLLRILATRC 859
Query: 810 MQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
M A YFCSG D D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 860 MMQAVYFCSG---MDNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADSTY 913
>gi|308809671|ref|XP_003082145.1| Exosomal 3'-5' exoribonuclease complex, subunit Rrp44/Dis3 (ISS)
[Ostreococcus tauri]
gi|116060612|emb|CAL55948.1| Exosomal 3'-5' exoribonuclease complex, subunit Rrp44/Dis3 (ISS)
[Ostreococcus tauri]
Length = 975
Score = 293 bits (751), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 218/710 (30%), Positives = 335/710 (47%), Gaps = 121/710 (17%)
Query: 160 FAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEGD 219
F H ++ E L KG+ K L R + +N EA+ E V ++G AA NRA +GD
Sbjct: 239 FDEHLDAGSIKEGLAKGELVKGLIRTSLYNPFEAHVTNEETGESVFLSGRAAMNRAFDGD 298
Query: 220 FVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCTLL 279
V I++ S W + G +S +ED T +
Sbjct: 299 SVAIEILPESEWLR-PGSKIVTSDIEDDAAATTST------------------------- 332
Query: 280 SEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSA 339
DD+S G P T++ T+ V G A S
Sbjct: 333 -------DDES------------------GGLAPETAEETDIV-------GAVATGAKSG 360
Query: 340 MISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVP-DR 398
++ PTG+VV II R+ R G +++ + + KG A L VP DR
Sbjct: 361 VV-------PTGKVVGIIRRNWRERGYAASIDMGK--DGKGPKATGAGFTTRVLCVPSDR 411
Query: 399 EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHV 458
++PK+ + + L + +R + +D+W +S +P+ H
Sbjct: 412 ----------RFPKIRIQTRQLEGLLDQR------------IVVVVDDWPADSAYPEGHY 449
Query: 459 LHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELL--SRKDLRNFC 516
+ G G V+ + A+L EN + F+P +C+P +PW V + L R+DLR+
Sbjct: 450 VKSLGVIGTVDAETQALLLENDVDDRPFAPAVFACVPALPWRVTEHHLAEPGREDLRDLL 509
Query: 517 IFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQ 576
+ ++DP D+DDALS L D +GVHIADV+ F+ P TA+D EA R T+ Y++Q
Sbjct: 510 VCSVDPPGCKDIDDALSARELDDERIELGVHIADVTSFLHPNTAMDEEAARRGTTTYLVQ 569
Query: 577 RKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI----GRTVIRSCCKLSY 632
R++ MLP L+ ++ SL G +RLAFS FW +N + + D I ++VI+S L+Y
Sbjct: 570 RRLDMLPGALTTDICSLVGGEERLAFSAFWIVNKSTMLPDETIKPRFTKSVIKSAAALTY 629
Query: 633 EHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALR 692
E AQ ID TL + D+ S++ L ++++ L+ +R +GAL
Sbjct: 630 EQAQLRID-------DATLND------------DLTLSLRRLRDIARRLRKRRMENGALT 670
Query: 693 LENSKPVFLFDEYGT-PYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH 751
L + + F D+ + P D + + N + EE MLLAN + AE I A+P +A+LRRH
Sbjct: 671 LASPEVKFEMDQQSSDPLDVGMYVTRETNQMVEEMMLLANVSTAERILEAYPAAAMLRRH 730
Query: 752 PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINY-ATRPM 810
P P + G+ +D S++ +L+ A + D Y F+ L+ ATR M
Sbjct: 731 PIPEQKMFEPLLKTAKACGIDIDPSTNRSLAATLDAA-VRPGDSY--FNTLLRLQATRCM 787
Query: 811 QLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
A Y SG + + HY LA P+YTHFTSP+RRY D++VHR L+AA+
Sbjct: 788 SQAVYCSSGQYA-GPERMHYGLAMPLYTHFTSPIRRYADVIVHRLLSAAI 836
>gi|313237070|emb|CBY12292.1| unnamed protein product [Oikopleura dioica]
Length = 907
Score = 293 bits (750), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 186/516 (36%), Positives = 267/516 (51%), Gaps = 64/516 (12%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTG +V II+R+ W NY G + +
Sbjct: 312 PTGEIVGIIKRA--------------WRNYCG-------------VIEGSTRVLFLAAQR 344
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK+ + + + I +RL +VA ID W+ +S +P H++ V G G+
Sbjct: 345 QIPKIRIETRQVDRLIGQRL----------VVA--IDGWSRKSRYPNGHLVKVLGNVGDK 392
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDL 528
+ + +L E+ + FSP+ LSCLP W + +EE+ R DLR + I ++DP TD+
Sbjct: 393 KTENEVLLLEHDVKHDAFSPKVLSCLPDKNWTITEEEMAKRVDLREYDIASVDPPGCTDI 452
Query: 529 DDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSE 588
DDAL ++L +G VGVHIADVS+F+ PGTALD EA R TSVY+ +I M+P+LLS
Sbjct: 453 DDALHCKKLPNGNYEVGVHIADVSHFIKPGTALDEEAAQRGTSVYLADNRIDMVPILLSS 512
Query: 589 EVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESS 648
+ SL G +RLAFS W+L+ +V ++VI+S +YE AQ ID K +S
Sbjct: 513 NLCSLRGGEERLAFSTIWELDDNAKIVSVKFHKSVIKSKSAFTYEEAQIRIDDKSKTDS- 571
Query: 649 NTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGT 707
+ S++ L ++K LK +R DGAL L + + F D E
Sbjct: 572 ------------------LTESLRGLNYLAKKLKAQRLEDGALTLASVEVRFHLDSETAD 613
Query: 708 PYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCS 767
P D ++ N + EEFMLLAN + AE I FP SA+LRRHP P +
Sbjct: 614 PIDLYTKELKETNSMVEEFMLLANCSVAEHIRTEFPQSAVLRRHPKPPVSNFDPLVRAAQ 673
Query: 768 KHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDW 827
G L+ +SS + SL A + D ++ +L +TR M A YFC+G F+ D W
Sbjct: 674 AKGFHLNVNSSRELADSLNLAVD--PSDPMVNTVLRVMSTRSMMQAVYFCTG-FESDC-W 729
Query: 828 GHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE 863
HY LA P+YTHFTSP+RRY D++VHR L A++ A+
Sbjct: 730 -HYGLAAPIYTHFTSPIRRYADIMVHRALAASIGAD 764
>gi|432117398|gb|ELK37741.1| Exosome complex exonuclease RRP44 [Myotis davidii]
Length = 928
Score = 293 bits (750), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 214/720 (29%), Positives = 329/720 (45%), Gaps = 155/720 (21%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEG-----VQTDVLITGIAAQN 213
IF+ H + + + ++ G + +R + N LEA + G + +++ G+ N
Sbjct: 195 IFSEHLPLSKLQQGIKSGTYLQGTFRASRENYLEATVWVHGDAEENKEASIILQGLKNLN 254
Query: 214 RAVEGDFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEY 273
RA+ D V ++ L K + + +S +++D
Sbjct: 255 RAIHEDIVAVE-----LLPKNQWVAPSSVVLQD--------------------------- 282
Query: 274 SNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNA 333
E N++ +E+E + TE++ + N+ M
Sbjct: 283 -------------------EGQNEDDVEKE-------------EETERILKTAVNEKM-- 308
Query: 334 IERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSS 392
+PTGRVV II+R+ W Y G S+ D K++R
Sbjct: 309 -------------LKPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRH 341
Query: 393 LSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDAT-IEMELVAARIDEWNEES 451
L TP + P++ R+E A+ +E + ID W S
Sbjct: 342 L---------FTPAEKRIPRI-------------RIETRQASALEGRRIIVAIDGWPRNS 379
Query: 452 PFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKD 511
+P H + G G+ E + +L E+ + FS LS LP +PW + ++++ +R+D
Sbjct: 380 RYPNGHFVKNLGEVGDKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNRED 439
Query: 512 LRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTS 571
LR+ C+ ++DP TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+
Sbjct: 440 LRHLCVCSVDPPGCTDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTT 499
Query: 572 VYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLS 631
VY+ +++I M+P LLS + SL VDRLAFS W++N +++ ++ I S L+
Sbjct: 500 VYLCEKRIDMVPELLSSNLCSLRCNVDRLAFSCIWEMNHNAEILKTRFTKSAINSKASLT 559
Query: 632 YEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGAL 691
Y AQ ID S T+ + D+ S++ L +++KILK +R GAL
Sbjct: 560 YAEAQMRID-------SATMND------------DITISLRGLNKLAKILKKRRIEKGAL 600
Query: 692 RLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRR 750
L + + F D E P D + N + EEFMLLAN + A+ I F + ALLR+
Sbjct: 601 TLSSPEVRFHMDSETHDPIDLQTKELRETNSMVEEFMLLANISVAKKIHDEFSEHALLRK 660
Query: 751 HPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLF----DILINYA 806
HPAP L++ T ++ SL+QA D F +L A
Sbjct: 661 HPAPPPSNYEILVKAAKSKNLEVKTDTAKALADSLDQA------DSATFPYLNTLLRILA 714
Query: 807 TRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
TR M A YFCSG D D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 715 TRCMMQAVYFCSG---MDNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTY 771
>gi|159149063|dbj|BAF92610.1| DIS3 [Homo sapiens]
Length = 958
Score = 293 bits (749), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 191/522 (36%), Positives = 270/522 (51%), Gaps = 63/522 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 406
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 340 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 376
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ P++ R+E A T+E + ID W S +P H + G
Sbjct: 377 DKRIPRI-------------RIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVRNLGDV 423
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
GE E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ CI ++DP
Sbjct: 424 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCICSVDPPGC 483
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 484 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 543
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 544 LSSNLCSLQCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTYAEAQLRID----- 598
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
S+N D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 599 -SANM-------------NDDITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 644
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 645 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 704
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 824
L++ T ++ +SL+QA E Y L +L ATR M A YFCSG D
Sbjct: 705 AARSRNLEIKTDTAKSLAESLDQA-ESPTFPY-LNTLLRILATRCMMQAVYFCSG---MD 759
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 760 NDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTY 801
>gi|17225572|gb|AAL37479.1|AF330044_1 KIAA1008 protein [Homo sapiens]
gi|189054486|dbj|BAG37259.1| unnamed protein product [Homo sapiens]
Length = 958
Score = 293 bits (749), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 191/522 (36%), Positives = 270/522 (51%), Gaps = 63/522 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 406
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 340 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 376
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ P++ R+E A T+E + ID W S +P H + G
Sbjct: 377 DKRIPRI-------------RIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVRNLGDV 423
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
GE E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ CI ++DP
Sbjct: 424 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCICSVDPPGC 483
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 484 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 543
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 544 LSSNLCSLKCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTYAEAQLRID----- 598
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
S+N D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 599 -SANM-------------NDDITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 644
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 645 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 704
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 824
L++ T ++ +SL+QA E Y L +L ATR M A YFCSG D
Sbjct: 705 AARSRNLEIKTDTAKSLAESLDQA-ESPTFPY-LNTLLRILATRCMMQAVYFCSG---MD 759
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 760 NDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTY 801
>gi|190014623|ref|NP_055768.3| exosome complex exonuclease RRP44 isoform a [Homo sapiens]
gi|73620993|sp|Q9Y2L1.2|RRP44_HUMAN RecName: Full=Exosome complex exonuclease RRP44; AltName:
Full=Protein DIS3 homolog; AltName: Full=Ribosomal
RNA-processing protein 44
gi|119600923|gb|EAW80517.1| KIAA1008, isoform CRA_a [Homo sapiens]
Length = 958
Score = 293 bits (749), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 191/522 (36%), Positives = 270/522 (51%), Gaps = 63/522 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 406
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 340 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 376
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ P++ R+E A T+E + ID W S +P H + G
Sbjct: 377 DKRIPRI-------------RIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVRNLGDV 423
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
GE E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ CI ++DP
Sbjct: 424 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCICSVDPPGC 483
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 484 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 543
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 544 LSSNLCSLKCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTYAEAQLRID----- 598
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
S+N D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 599 -SANM-------------NDDITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 644
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 645 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 704
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 824
L++ T ++ +SL+QA E Y L +L ATR M A YFCSG D
Sbjct: 705 AARSRNLEIKTDTAKSLAESLDQA-ESPTFPY-LNTLLRILATRCMMQAVYFCSG---MD 759
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 760 NDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTY 801
>gi|33440520|gb|AAH56143.1| DIS3 mitotic control homolog (S. cerevisiae) [Homo sapiens]
Length = 958
Score = 293 bits (749), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 191/522 (36%), Positives = 270/522 (51%), Gaps = 63/522 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 406
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 340 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 376
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ P++ R+E A T+E + ID W S +P H + G
Sbjct: 377 DKRIPRI-------------RIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVRNLGDV 423
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
GE E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ CI ++DP
Sbjct: 424 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCICSVDPPGC 483
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 484 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 543
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 544 LSSNLCSLKCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTYAEAQLRID----- 598
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
S+N D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 599 -SANM-------------NDDITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 644
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 645 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 704
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 824
L++ T ++ +SL+QA E Y L +L ATR M A YFCSG D
Sbjct: 705 AARSRNLEIKTDTAKSLAESLDQA-ESPTFPY-LNTLLRILATRCMMQAVYFCSG---MD 759
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 760 NDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTY 801
>gi|134114027|ref|XP_774261.1| hypothetical protein CNBG2420 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256896|gb|EAL19614.1| hypothetical protein CNBG2420 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1657
Score = 293 bits (749), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 178/521 (34%), Positives = 279/521 (53%), Gaps = 27/521 (5%)
Query: 348 RPT--GRVVSIIERSPRR--DGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDRE---- 399
+PT G VV+++ER P + G +G L + + + ++ + E
Sbjct: 936 KPTYAGHVVAVVERMPGQLFSGQLGVLRPSSAATKEKQELERREREGEKARKEEPETRPK 995
Query: 400 YIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVL 459
+ PT + P + + + P ++ DA +L A I W S P ++
Sbjct: 996 IVWFKPTDKRVPLIAIPTEQAPADF---IDNPDA-YSNKLFVATIKRWPITSLHPFGTLV 1051
Query: 460 HVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFT 519
G G E + +A+L + FS ++ CLP +PW VP+ E R DLR +FT
Sbjct: 1052 EELGAIGNSEVETSALLKDCNFPTEEFSEMTMKCLPPMPWSVPEREYDVRTDLREERVFT 1111
Query: 520 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 579
IDP + DLDDALS + DG VGVHIADVS+FV LD EA+ R+TSVY++QR +
Sbjct: 1112 IDPPHSKDLDDALSFKDNKDGTFTVGVHIADVSFFVKANAQLDREARKRATSVYLVQRAV 1171
Query: 580 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDII 639
PM P LLSE++ SL P +RL FS + ++ G+V+ + +T+++SC KL+Y+ A ++
Sbjct: 1172 PMFPPLLSEDLCSLVPDYERLTFSAIFTVDEEGNVLQKKFAKTIVKSCAKLTYDDALTVV 1231
Query: 640 DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPV 699
G S + +++ +D+ I+SL+ ++ ++ +R +GA+ + +SK
Sbjct: 1232 KGGALPRSKTS------RIH---LATDIEGDIRSLHSIASKMRARRIENGAMVVSSSKVS 1282
Query: 700 FLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKL 759
F FD G P D + + + EEFMLL N++ A +IA A P+ ALLRRH P+ R+L
Sbjct: 1283 FEFDAQGRPVDCQTYQNGEASVIVEEFMLLTNQSVARIIANALPEQALLRRHEPPSERRL 1342
Query: 760 REFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSG 819
F A +K G +D +S+G +S ++ + D + D+L +Q A YFC+G
Sbjct: 1343 ESFVARATKLGFDMDPTSAGTLQKSFDKVLD--NDSALCIDLLRKKV---IQRARYFCAG 1397
Query: 820 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
D + H+ L P+YTHFTSP+RRY D++VHR L+A L
Sbjct: 1398 -MLDIAKFAHWGLNTPLYTHFTSPIRRYADVLVHRMLDACL 1437
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 152 QSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAA 211
Q R +FAP+ ++ L+ G + RVN NR +AY + + D+ I G
Sbjct: 800 QGPQRKSLFAPYLPQASLPPLLQAGKLVVGVLRVNKKNRSDAYVATDVLDADIYICGSKD 859
Query: 212 QNRAVEGDFVLIK-VDRLSLWA 232
+NRA+EGD V ++ +D +W+
Sbjct: 860 RNRALEGDIVAVELLDVDEVWS 881
>gi|40789019|dbj|BAA76852.2| KIAA1008 protein [Homo sapiens]
Length = 935
Score = 293 bits (749), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 191/522 (36%), Positives = 270/522 (51%), Gaps = 63/522 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 406
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 317 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 353
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ P++ R+E A T+E + ID W S +P H + G
Sbjct: 354 DKRIPRI-------------RIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVRNLGDV 400
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
GE E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ CI ++DP
Sbjct: 401 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCICSVDPPGC 460
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 461 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 520
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 521 LSSNLCSLKCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTYAEAQLRID----- 575
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
S+N D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 576 -SANM-------------NDDITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 621
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 622 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 681
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 824
L++ T ++ +SL+QA E Y L +L ATR M A YFCSG D
Sbjct: 682 AARSRNLEIKTDTAKSLAESLDQA-ESPTFPY-LNTLLRILATRCMMQAVYFCSG---MD 736
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 737 NDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTY 778
>gi|126337588|ref|XP_001365109.1| PREDICTED: exosome complex exonuclease RRP44 [Monodelphis
domestica]
Length = 959
Score = 293 bits (749), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 191/523 (36%), Positives = 271/523 (51%), Gaps = 65/523 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 407
RP+GRVV II+R+ R G L S+ D K++R L TP
Sbjct: 341 RPSGRVVGIIKRNWR--PFCGML-----------SKSDIKESRRHL---------FTPAD 378
Query: 408 PKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 466
+ P++ R+E A T+E + + ID W + S +P H + G G
Sbjct: 379 KRIPRI-------------RIETRQASTLEGQRIIVAIDGWPKNSRYPNGHFVKNLGAVG 425
Query: 467 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 526
+ E + +L E+ + FS LS LP +PW + +E++ +R+DLR+ C+ ++DP T
Sbjct: 426 DKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWNITEEDMKNREDLRHLCVCSVDPPKCT 485
Query: 527 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 586
D+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P LL
Sbjct: 486 DIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESAKRGTTVYLCEKRIDMVPELL 545
Query: 587 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 646
S + SL VDRLAFS W++N +++ ++ I S L+Y AQ ID
Sbjct: 546 SSNLCSLRSNVDRLAFSCIWEMNHNAEILKTRFTKSAINSKASLTYAEAQMRID------ 599
Query: 647 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EY 705
S T+ + D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 600 -SATMND------------DITTSLRGLNKLAKILKRRRIDAGALILSSPEVRFHVDSET 646
Query: 706 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAF 765
P D + N + EEFMLLAN + A+ I F ++ALLR+HPAP
Sbjct: 647 HDPIDLQTKELRETNSMVEEFMLLANVSVAKKIHEEFSENALLRKHPAPPPSNYEVLVKA 706
Query: 766 CSKHGLQLDTSSSGQFHQSLEQAREKLKDDYV--LFDILINYATRPMQLASYFCSGDFKD 823
L T S+ SL+Q E Y+ LF IL ATR M A YFCSG
Sbjct: 707 AKSKNLDFKTDSAKALADSLDQV-ESPDFPYLSTLFRIL---ATRCMMQAVYFCSG---M 759
Query: 824 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
D D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 760 DNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADSTY 802
>gi|119113846|ref|XP_314089.3| AGAP005191-PA [Anopheles gambiae str. PEST]
gi|116128315|gb|EAA09476.3| AGAP005191-PA [Anopheles gambiae str. PEST]
Length = 967
Score = 292 bits (748), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 170/436 (38%), Positives = 244/436 (55%), Gaps = 25/436 (5%)
Query: 433 ATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLS 492
AT+ + + ID+W S +PQ H + G G E + IL E+ + S FS + L+
Sbjct: 385 ATLLSQRIIVAIDQWPRHSRYPQGHFVRALGPIGSKETENEVILLEHDVPHSRFSEDVLA 444
Query: 493 CLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVS 552
CLP +PW + +L R DLR+ + ++DP TD+DDAL RL +G VGVHIADV
Sbjct: 445 CLPELPWTITAADLQRRVDLRDITVCSVDPPGCTDIDDALHARRLPNGNIEVGVHIADVG 504
Query: 553 YFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAG 612
+F+ PGTALD EA R+T+VY++ ++I M+P LLS + SL G +R AFS W+L+
Sbjct: 505 HFIRPGTALDREAASRATTVYLVDKRIDMVPGLLSSNLCSLRGGEERFAFSCIWELDDEA 564
Query: 613 DVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIK 672
++ + ++VI+S L+YE AQ IID D + +N DV S++
Sbjct: 565 NIRNTRYHKSVIKSKSALTYEEAQIIID---DAKQTN----------------DVATSLR 605
Query: 673 SLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLAN 731
L ++KILK +R GAL L + + F D E P D + N + EEFMLLAN
Sbjct: 606 LLNRLAKILKKRRTEKGALVLASPEIRFQVDSETHDPIDVKAKQLLETNSMVEEFMLLAN 665
Query: 732 KTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREK 791
+ AE I + FP+ A+LRRHP P G ++ T+S + SL++A
Sbjct: 666 VSVAEKIEQEFPECAMLRRHPCPPQANYEPLVKAAEHQGFEILTTSGKELATSLDKA--- 722
Query: 792 LKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDL 850
+K D F+ ++ ATR M A YF SG + D ++ HY LA P+YTHFTSP+RRY D+
Sbjct: 723 VKPDNPYFNTMLRILATRCMMQAVYFISGTVQRD-EFFHYGLAAPIYTHFTSPIRRYADI 781
Query: 851 VVHRTLNAALEAEKLY 866
+VHR L A + A+ Y
Sbjct: 782 IVHRLLAACIGADSTY 797
Score = 53.9 bits (128), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 45/79 (56%)
Query: 153 SEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQ 212
SE++ +F H +M ++E ++ G + + + N LE Y ++EG++ VLI G
Sbjct: 222 SESKDPLFPSHLTMLQIHEGIKGGKLMQGGFLASRENYLEGYVRVEGIEKAVLIQGRMNL 281
Query: 213 NRAVEGDFVLIKVDRLSLW 231
NRAV+GD V I++ S W
Sbjct: 282 NRAVDGDTVAIEMLPESEW 300
>gi|58269608|ref|XP_571960.1| SSD1 protein [Cryptococcus neoformans var. neoformans JEC21]
gi|57228196|gb|AAW44653.1| SSD1 protein, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 1671
Score = 292 bits (748), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 178/521 (34%), Positives = 279/521 (53%), Gaps = 27/521 (5%)
Query: 348 RPT--GRVVSIIERSPRR--DGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDRE---- 399
+PT G VV+++ER P + G +G L + + + ++ + E
Sbjct: 950 KPTYAGHVVAVVERMPGQLFSGQLGVLRPSSAATKEKQELERREREGEKARKEEPETRPK 1009
Query: 400 YIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVL 459
+ PT + P + + + P ++ DA +L A I W S P ++
Sbjct: 1010 IVWFKPTDKRVPLIAIPTEQAPADF---IDNPDA-YSNKLFVATIKRWPITSLHPFGTLV 1065
Query: 460 HVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFT 519
G G E + +A+L + FS ++ CLP +PW VP+ E R DLR +FT
Sbjct: 1066 EELGAIGNSEVETSALLKDCNFPTEEFSEMTMKCLPPMPWSVPEREYDVRTDLREERVFT 1125
Query: 520 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 579
IDP + DLDDALS + DG VGVHIADVS+FV LD EA+ R+TSVY++QR +
Sbjct: 1126 IDPPHSKDLDDALSFKDNKDGTFTVGVHIADVSFFVKANAQLDREARKRATSVYLVQRAV 1185
Query: 580 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDII 639
PM P LLSE++ SL P +RL FS + ++ G+V+ + +T+++SC KL+Y+ A ++
Sbjct: 1186 PMFPPLLSEDLCSLVPDYERLTFSAIFTVDEEGNVLQKKFAKTIVKSCAKLTYDDALTVV 1245
Query: 640 DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPV 699
G S + +++ +D+ I+SL+ ++ ++ +R +GA+ + +SK
Sbjct: 1246 KGGALPRSKTS------RIH---LATDIEGDIRSLHSIASKMRARRIENGAMVVSSSKVS 1296
Query: 700 FLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKL 759
F FD G P D + + + EEFMLL N++ A +IA A P+ ALLRRH P+ R+L
Sbjct: 1297 FEFDAQGRPVDCQTYQNGEASVIVEEFMLLTNQSVARIIANALPEQALLRRHEPPSERRL 1356
Query: 760 REFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSG 819
F A +K G +D +S+G +S ++ + D + D+L +Q A YFC+G
Sbjct: 1357 ESFVARATKLGFDMDPTSAGTLQKSFDKVLD--NDSALCIDLLRKKV---IQRARYFCAG 1411
Query: 820 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
D + H+ L P+YTHFTSP+RRY D++VHR L+A L
Sbjct: 1412 -MLDIAKFAHWGLNTPLYTHFTSPIRRYADVLVHRMLDACL 1451
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 152 QSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAA 211
Q R +FAP+ ++ L+ G + RVN NR +AY + + D+ I G
Sbjct: 814 QGPQRKSLFAPYLPQASLPPLLQAGKLVVGVLRVNKKNRSDAYVATDVLDADIYICGSKD 873
Query: 212 QNRAVEGDFVLIK-VDRLSLWA 232
+NRA+EGD V ++ +D +W+
Sbjct: 874 RNRALEGDIVAVELLDVDEVWS 895
>gi|5262619|emb|CAB45749.1| hypothetical protein [Homo sapiens]
Length = 632
Score = 292 bits (748), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 194/535 (36%), Positives = 274/535 (51%), Gaps = 63/535 (11%)
Query: 335 ERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSL 393
ER+ S +PTGRVV II+R+ W Y G S+ D K++R L
Sbjct: 1 ERMLKTAVSEKMLKPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL 46
Query: 394 SVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESP 452
TP + P++ R+E A T+E + ID W S
Sbjct: 47 ---------FTPADKRIPRI-------------RIETRQASTLEGRRIIVAIDGWPRNSR 84
Query: 453 FPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDL 512
+P H + G GE E + +L E+ + FS LS LP +PW + ++++ +R+DL
Sbjct: 85 YPNGHFVRNLGDVGEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDL 144
Query: 513 RNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSV 572
R+ CI ++DP TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+V
Sbjct: 145 RHLCICSVDPPGCTDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTV 204
Query: 573 YMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSY 632
Y+ +++I M+P LLS + SL VDRLAFS W++N +++ ++VI S L+Y
Sbjct: 205 YLCEKRIDMVPELLSSNLCSLKCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTY 264
Query: 633 EHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALR 692
AQ ID S+N D+ S++ L +++KILK +R GAL
Sbjct: 265 AEAQLRID------SANM-------------NDDITTSLRGLNKLAKILKKRRIEKGALT 305
Query: 693 LENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH 751
L + + F D E P D + N + EEFMLLAN + A+ I F + ALLR+H
Sbjct: 306 LSSPEVRFHMDSETHDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKH 365
Query: 752 PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQ 811
PAP L++ T ++ +SL+QA E Y L +L ATR M
Sbjct: 366 PAPPPSNYEILVKAARSRNLEIKTDTAKSLAESLDQA-ESPTFPY-LNTLLRILATRCMM 423
Query: 812 LASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
A YFCSG D D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 424 QAVYFCSG---MDNDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTY 475
>gi|119600925|gb|EAW80519.1| KIAA1008, isoform CRA_c [Homo sapiens]
Length = 796
Score = 292 bits (748), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 191/522 (36%), Positives = 270/522 (51%), Gaps = 63/522 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 406
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 178 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 214
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ P++ R+E A T+E + ID W S +P H + G
Sbjct: 215 DKRIPRI-------------RIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVRNLGDV 261
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
GE E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ CI ++DP
Sbjct: 262 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCICSVDPPGC 321
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 322 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 381
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 382 LSSNLCSLKCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTYAEAQLRID----- 436
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
S+N D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 437 -SANM-------------NDDITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 482
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 483 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 542
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 824
L++ T ++ +SL+QA E Y L +L ATR M A YFCSG D
Sbjct: 543 AARSRNLEIKTDTAKSLAESLDQA-ESPTFPY-LNTLLRILATRCMMQAVYFCSG---MD 597
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 598 NDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTY 639
>gi|357114232|ref|XP_003558904.1| PREDICTED: exosome complex exonuclease RRP44-like isoform 1
[Brachypodium distachyon]
Length = 934
Score = 292 bits (748), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 186/521 (35%), Positives = 274/521 (52%), Gaps = 56/521 (10%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 407
RP GR+V II+R+ W +Y GS + S V ++
Sbjct: 338 RPVGRIVGIIKRN--------------WNSY-CGSLEPMPMPAGSGGVAHALFVS---KD 379
Query: 408 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 467
+ PK+ + + L + + KR + +D W+ S +P H + G G+
Sbjct: 380 RRIPKIRIQTRQLGNLLNKR------------IVVAVDSWDVLSRYPSGHYVRTIGDIGD 427
Query: 468 VEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLS--RKDLRNFCIFTIDPSTA 525
E + +L EN I FS + L+CLP +PW + ++L + R+DLR+ +F++DP
Sbjct: 428 KETETEVVLIENDINTRPFSTQVLACLPPLPWSLSPDDLANPNRQDLRHVRVFSVDPPGC 487
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
D+DDAL L +G VGVHIADV+ FVLPGT LD EA R+TSVY++ ++I MLP
Sbjct: 488 RDIDDALHCTPLPNGNFEVGVHIADVTNFVLPGTPLDEEASQRATSVYLVGQRIDMLPKP 547
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
L+E+V SL V+RLAFS+ W++ D++ ++VI+SC +SY AQ +D V
Sbjct: 548 LTEDVCSLRADVERLAFSVIWEMTPDADIISSRYTKSVIKSCAAMSYVEAQARMDDSRLV 607
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
+ + +++L ++KI++++R GAL L +++ F D E
Sbjct: 608 DP-------------------LTVDLRNLNSLAKIMRNRRCERGALTLASAEVKFEIDSE 648
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + + N + EEFML AN + AE I + +P +LLRRHP+P L
Sbjct: 649 THDPLDIGIYQIREANQMIEEFMLAANVSVAEKILKHYPLCSLLRRHPSPTKEMLEPLLR 708
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 824
S GL LD SSS SL+ A+ +DD ++ ATR M A YFCSGD
Sbjct: 709 TASSVGLNLDVSSSKALADSLDNAK---RDDPYFNKLIRILATRCMTQAVYFCSGDLS-L 764
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 865
+++ HY LA +YTHFTSP+RRY D+VVHR L AAL+ KL
Sbjct: 765 SEYYHYGLASALYTHFTSPIRRYADVVVHRLLAAALDIAKL 805
Score = 47.4 bits (111), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R I++ H M + L G + RVN +N EAY E + +++I G + NRA
Sbjct: 214 RKVIYSEHKPMSEITSGLRCGIFHQGKLRVNRYNPFEAYVGSESIGDEIIIRGRSNMNRA 273
Query: 216 VEGDFVLIKVDRLSLWAKMKGF 237
+GD V +++ W + K F
Sbjct: 274 FDGDIVAVELLPQDQWNESKSF 295
>gi|242037077|ref|XP_002465933.1| hypothetical protein SORBIDRAFT_01g048480 [Sorghum bicolor]
gi|241919787|gb|EER92931.1| hypothetical protein SORBIDRAFT_01g048480 [Sorghum bicolor]
Length = 934
Score = 292 bits (748), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 201/559 (35%), Positives = 287/559 (51%), Gaps = 70/559 (12%)
Query: 313 PSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPT--KRPTGRVVSIIERSPRRDGIVGFL 370
P+++D + ++S Q S + SS P+ RP GRVV II+R+
Sbjct: 311 PNSADDAPRNTNSTQ----------STVGSSAPSVSSRPVGRVVGIIKRN---------- 350
Query: 371 NVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEE 430
W +Y GS + S V ++ + PK+ + + L + + KR
Sbjct: 351 ----WNSY-CGSLEPMPMPAGSGGVAHALFVS---KDRRVPKIRIQTRQLENLVNKR--- 399
Query: 431 GDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPES 490
+ +D W+ S +P H + G G+ E + +L EN I FS +
Sbjct: 400 ---------IVVAVDSWDVLSRYPSGHYVRTIGDIGDKETETEVVLIENDINTRPFSTQV 450
Query: 491 LSCLPCVPWEVPQEELLS--RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHI 548
L+CLP +PW + E+L + R+DLR +F++DP D+DDAL L +G VGVHI
Sbjct: 451 LACLPPLPWTLSPEDLANPNRQDLRQVRVFSVDPPGCRDIDDALHCTLLPNGNFEVGVHI 510
Query: 549 ADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDL 608
ADV+ FV PGT LD EA R TSVY++ ++I MLP L+E+V SL V+RLAFS+ W++
Sbjct: 511 ADVTNFVHPGTPLDEEAAQRGTSVYLVGQRIDMLPKPLTEDVCSLRADVERLAFSVIWEM 570
Query: 609 NSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVV 668
DV+ ++VI+SC +SY AQ +D V+ +
Sbjct: 571 TPDADVISTRYTKSVIKSCAAMSYVEAQARMDDSRLVDP-------------------LT 611
Query: 669 RSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFM 727
+++L ++KI++ +R GAL L +++ F D E P D + + N + EEFM
Sbjct: 612 VDLRNLNSLAKIMRQRRCERGALTLASAEVKFEIDSETHDPLDIGIYQIREANQMIEEFM 671
Query: 728 LLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQ 787
L AN + AE I + FP +LLRRHP+P L S GL LD SSS +SL+
Sbjct: 672 LAANVSVAEKILKHFPLCSLLRRHPSPTKEMLEPLLRTASSVGLNLDVSSSKALAESLDN 731
Query: 788 AREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRR 846
A K D Y F+ LI ATR M A YFCSGD +++ HY LA +YTHFTSP+RR
Sbjct: 732 A--KSNDPY--FNKLIRILATRCMTQAVYFCSGDLT-FSEYYHYGLAASLYTHFTSPIRR 786
Query: 847 YPDLVVHRTLNAALEAEKL 865
Y D+VVHR L AAL KL
Sbjct: 787 YADVVVHRLLAAALGIAKL 805
Score = 48.1 bits (113), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 43/92 (46%)
Query: 146 DDNPSHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVL 205
+D H+ + I+ H M + L G + RVN +N EAY E + +++
Sbjct: 205 EDVEDHRPSKKKVIYNEHKPMSEITSGLRCGIYHQGKLRVNRYNPFEAYVGSESIGDEIV 264
Query: 206 ITGIAAQNRAVEGDFVLIKVDRLSLWAKMKGF 237
I G + NRA +GD V +++ W + K F
Sbjct: 265 IRGRSNMNRAFDGDIVAVELLPQDQWHESKSF 296
>gi|395833515|ref|XP_003789776.1| PREDICTED: exosome complex exonuclease RRP44 [Otolemur garnettii]
Length = 958
Score = 292 bits (747), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 189/522 (36%), Positives = 269/522 (51%), Gaps = 63/522 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 406
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 340 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 376
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDATI-EMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ P++ R+E A++ E + ID W S +P H + G
Sbjct: 377 DKRIPRI-------------RIETRQASVLEGRRIIVAIDGWPRNSRYPNGHFVKNLGDV 423
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
GE E + +L E+ + FS LS LP +PW + + ++ +R+DLR+ C+ ++DP
Sbjct: 424 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITENDMKNREDLRHLCVCSVDPPGC 483
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 484 TDIDDALHCRELENGHLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 543
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 544 LSSNLCSLRSNVDRLAFSCIWEMNHNAEILKTRFTKSVINSKASLTYAEAQMRID----- 598
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
S T+ + D+ S++ L +++KILK KR GAL L + + F D E
Sbjct: 599 --SATMND------------DITSSLRGLNKLAKILKKKRIEKGALTLSSPEVRFHMDSE 644
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 645 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 704
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 824
L++ T ++ SL++A E Y L +L ATR M A YFCSG D
Sbjct: 705 AAKSKNLEIKTDTAKSLADSLDRA-ESPAFPY-LNTLLRILATRCMMQAVYFCSG---MD 759
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 760 NDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTY 801
>gi|119600924|gb|EAW80518.1| KIAA1008, isoform CRA_b [Homo sapiens]
gi|119600927|gb|EAW80521.1| KIAA1008, isoform CRA_b [Homo sapiens]
Length = 694
Score = 292 bits (747), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 189/522 (36%), Positives = 270/522 (51%), Gaps = 63/522 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 406
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 76 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 112
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ P++ R+E A T+E + ID W S +P H + G
Sbjct: 113 DKRIPRI-------------RIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVRNLGDV 159
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
GE E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ CI ++DP
Sbjct: 160 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCICSVDPPGC 219
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 220 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 279
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ +
Sbjct: 280 LSSNLCSLKCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTYAEAQ------LRI 333
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
+S+N D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 334 DSANM-------------NDDITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 380
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 381 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 440
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 824
L++ T ++ +SL+QA E Y L +L ATR M A YFCSG D
Sbjct: 441 AARSRNLEIKTDTAKSLAESLDQA-ESPTFPY-LNTLLRILATRCMMQAVYFCSG---MD 495
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 496 NDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTY 537
>gi|414864568|tpg|DAA43125.1| TPA: hypothetical protein ZEAMMB73_527148 [Zea mays]
Length = 934
Score = 292 bits (747), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 200/559 (35%), Positives = 287/559 (51%), Gaps = 70/559 (12%)
Query: 313 PSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPT--KRPTGRVVSIIERSPRRDGIVGFL 370
P+++D + ++S Q S + SS P+ RP GRV+ II+R+
Sbjct: 311 PNSADDAPRNTNSTQ----------STVGSSAPSISSRPVGRVMGIIKRN---------- 350
Query: 371 NVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEE 430
W +Y GS + S V ++ + PK+ + + L + + KR
Sbjct: 351 ----WNSY-CGSLQPMPMPAGSGGVAHALFVS---KDRRVPKIRIQTRQLENLVNKR--- 399
Query: 431 GDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPES 490
+ +D W+ S +P H + G G+ E + +L EN I FS +
Sbjct: 400 ---------IVVAVDSWDVLSRYPSGHYVRTIGDIGDKETETEVVLIENDINTRPFSTQV 450
Query: 491 LSCLPCVPWEVPQEELLS--RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHI 548
L+CLP +PW + E+L + R+DLR +F++DP D+DDAL L +G VGVHI
Sbjct: 451 LACLPPLPWTLSPEDLANPNRQDLRQVRVFSVDPPGCRDIDDALHCTLLPNGNFEVGVHI 510
Query: 549 ADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDL 608
ADV+ FV PGT LD EA R TSVY++ ++I MLP L+E+V SL V+RLAFS+ W++
Sbjct: 511 ADVTNFVHPGTPLDEEAAQRGTSVYLVGQRIDMLPKPLTEDVCSLRADVERLAFSVIWEM 570
Query: 609 NSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVV 668
DV+ ++VI+SC +SY AQ +D V+ +
Sbjct: 571 TPDADVISTRYTKSVIKSCAAMSYVEAQARMDDSRLVDP-------------------LT 611
Query: 669 RSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFM 727
+++L ++KI++ +R GAL L +++ F D E P D + + N + EEFM
Sbjct: 612 VDLRNLNSLAKIMRQRRCERGALTLASAEVKFEIDSETHDPLDIGIYQIREANQMIEEFM 671
Query: 728 LLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQ 787
L AN + AE I + FP +LLRRHP+P L S GL LD SSS +SL+
Sbjct: 672 LAANVSVAEKILKHFPLCSLLRRHPSPTKEMLEPLLRTASSIGLNLDVSSSKALAESLDN 731
Query: 788 AREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRR 846
A K D Y F+ LI ATR M A YFCSGD +++ HY LA +YTHFTSP+RR
Sbjct: 732 A--KSNDPY--FNKLIRILATRCMTQAVYFCSGDLT-FSEYYHYGLAASLYTHFTSPIRR 786
Query: 847 YPDLVVHRTLNAALEAEKL 865
Y D+VVHR L AAL KL
Sbjct: 787 YADVVVHRLLAAALNIAKL 805
Score = 47.8 bits (112), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 43/92 (46%)
Query: 146 DDNPSHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVL 205
+D H+ + I+ H M + L G + RVN +N EAY E + +++
Sbjct: 205 EDVDDHRPSKKKVIYNEHKPMSEITSGLRCGIYHQGKLRVNRYNPFEAYVGSESIGDEIV 264
Query: 206 ITGIAAQNRAVEGDFVLIKVDRLSLWAKMKGF 237
I G + NRA +GD V +++ W + K F
Sbjct: 265 IRGRSNMNRAFDGDIVAVELLPQDQWHESKSF 296
>gi|223944351|gb|ACN26259.1| unknown [Zea mays]
gi|414864569|tpg|DAA43126.1| TPA: hypothetical protein ZEAMMB73_527148 [Zea mays]
Length = 935
Score = 292 bits (747), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 200/559 (35%), Positives = 287/559 (51%), Gaps = 70/559 (12%)
Query: 313 PSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPT--KRPTGRVVSIIERSPRRDGIVGFL 370
P+++D + ++S Q S + SS P+ RP GRV+ II+R+
Sbjct: 312 PNSADDAPRNTNSTQ----------STVGSSAPSISSRPVGRVMGIIKRN---------- 351
Query: 371 NVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEE 430
W +Y GS + S V ++ + PK+ + + L + + KR
Sbjct: 352 ----WNSY-CGSLQPMPMPAGSGGVAHALFVS---KDRRVPKIRIQTRQLENLVNKR--- 400
Query: 431 GDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPES 490
+ +D W+ S +P H + G G+ E + +L EN I FS +
Sbjct: 401 ---------IVVAVDSWDVLSRYPSGHYVRTIGDIGDKETETEVVLIENDINTRPFSTQV 451
Query: 491 LSCLPCVPWEVPQEELLS--RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHI 548
L+CLP +PW + E+L + R+DLR +F++DP D+DDAL L +G VGVHI
Sbjct: 452 LACLPPLPWTLSPEDLANPNRQDLRQVRVFSVDPPGCRDIDDALHCTLLPNGNFEVGVHI 511
Query: 549 ADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDL 608
ADV+ FV PGT LD EA R TSVY++ ++I MLP L+E+V SL V+RLAFS+ W++
Sbjct: 512 ADVTNFVHPGTPLDEEAAQRGTSVYLVGQRIDMLPKPLTEDVCSLRADVERLAFSVIWEM 571
Query: 609 NSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVV 668
DV+ ++VI+SC +SY AQ +D V+ +
Sbjct: 572 TPDADVISTRYTKSVIKSCAAMSYVEAQARMDDSRLVDP-------------------LT 612
Query: 669 RSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFM 727
+++L ++KI++ +R GAL L +++ F D E P D + + N + EEFM
Sbjct: 613 VDLRNLNSLAKIMRQRRCERGALTLASAEVKFEIDSETHDPLDIGIYQIREANQMIEEFM 672
Query: 728 LLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQ 787
L AN + AE I + FP +LLRRHP+P L S GL LD SSS +SL+
Sbjct: 673 LAANVSVAEKILKHFPLCSLLRRHPSPTKEMLEPLLRTASSIGLNLDVSSSKALAESLDN 732
Query: 788 AREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRR 846
A K D Y F+ LI ATR M A YFCSGD +++ HY LA +YTHFTSP+RR
Sbjct: 733 A--KSNDPY--FNKLIRILATRCMTQAVYFCSGDLT-FSEYYHYGLAASLYTHFTSPIRR 787
Query: 847 YPDLVVHRTLNAALEAEKL 865
Y D+VVHR L AAL KL
Sbjct: 788 YADVVVHRLLAAALNIAKL 806
Score = 47.8 bits (112), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 43/92 (46%)
Query: 146 DDNPSHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVL 205
+D H+ + I+ H M + L G + RVN +N EAY E + +++
Sbjct: 205 EDVDDHRPSKKKVIYNEHKPMSEITSGLRCGIYHQGKLRVNRYNPFEAYVGSESIGDEIV 264
Query: 206 ITGIAAQNRAVEGDFVLIKVDRLSLWAKMKGF 237
I G + NRA +GD V +++ W + K F
Sbjct: 265 IRGRSNMNRAFDGDIVAVELLPQDQWHESKSF 296
>gi|344242628|gb|EGV98731.1| Exosome complex exonuclease RRP44 [Cricetulus griseus]
Length = 621
Score = 292 bits (747), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 188/522 (36%), Positives = 267/522 (51%), Gaps = 63/522 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 406
RPTGRVV II+R+ W Y G S+ K++R L TP
Sbjct: 3 RPTGRVVGIIKRN--------------WRPYCGMLSKSGIKESRRHL---------FTPA 39
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ P++ R+E A T+E + +D W S +P H + G
Sbjct: 40 DKRIPRI-------------RIETRQASTLEGRRIIVAVDGWPRNSRYPNGHFVKNLGDV 86
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
GE E + +L E+ + FS LS LP +PW + + ++ +R+DLR+ C+ ++DP
Sbjct: 87 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITENDMKNREDLRHLCVCSVDPPGC 146
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
TD+DDAL LS+G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 147 TDIDDALHCRELSNGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 206
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 207 LSSNLCSLRSNVDRLAFSCIWEMNHNAEILKTRFTKSVINSKASLTYAEAQMRID----- 261
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
S + + D+ S++ L +++KILK R GAL L + + F D E
Sbjct: 262 --SAAMND------------DITTSLRGLNKLAKILKKGRIEKGALTLSSPEVRFHMDSE 307
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 308 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 367
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 824
L++ T ++ SL+QA + D L +L ATR M A YFCSG D
Sbjct: 368 AAKSKNLEIKTDTAKSLADSLDQA--ECPDFPYLNTLLRILATRCMMQAVYFCSG---MD 422
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 423 NDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADSTY 464
>gi|344275368|ref|XP_003409484.1| PREDICTED: exosome complex exonuclease RRP44 isoform 1 [Loxodonta
africana]
Length = 956
Score = 292 bits (747), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 187/522 (35%), Positives = 269/522 (51%), Gaps = 63/522 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 406
+PTGRVV II R+ W Y G S+ D K++R L TP
Sbjct: 340 KPTGRVVGIIRRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 376
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ P++ R+E A T+E + + ID W S +P H + G
Sbjct: 377 DKRIPRI-------------RIETRQASTLEGQRIIVAIDGWPRNSRYPNGHFVKNLGDA 423
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
G+ E + +L E+ + FS LS LP +PW + ++++ R+DLR+ C+ ++DP
Sbjct: 424 GDKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWAITEKDMKYREDLRHLCVCSVDPPGC 483
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
TD+DDAL +L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 484 TDIDDALHCRQLENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 543
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS + SL VDRLAFS W++N +++ ++ I S L+Y AQ ID
Sbjct: 544 LSSNLCSLRCNVDRLAFSCIWEMNHNAEILKTRFTKSAINSKASLTYAEAQMRID----- 598
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
S T+ + D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 599 --STTMND------------DITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 644
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 645 THDPIDMQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 704
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 824
L++ T ++ SL++A E Y L +L ATR M A YFCSG D
Sbjct: 705 AAKSKNLEIKTDTAKSLADSLDKA-ESPTFPY-LNTLLRILATRCMMQAVYFCSG---MD 759
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 760 NDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADSTY 801
>gi|71296758|gb|AAH38101.1| DIS3 protein [Homo sapiens]
Length = 796
Score = 292 bits (747), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 191/522 (36%), Positives = 270/522 (51%), Gaps = 63/522 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 406
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 178 KPTGRVVVIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 214
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ P++ R+E A T+E + ID W S +P H + G
Sbjct: 215 DKRIPRI-------------RIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVRNLGDV 261
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
GE E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ CI ++DP
Sbjct: 262 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCICSVDPPGC 321
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 322 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 381
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 382 LSSNLCSLKCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTYAEAQLRID----- 436
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
S+N D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 437 -SANM-------------NDDITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 482
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 483 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 542
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 824
L++ T ++ +SL+QA E Y L +L ATR M A YFCSG D
Sbjct: 543 AARSRNLEIKTDTAKSLAESLDQA-ESPTFPY-LNTLLRILATRCMMQAVYFCSG---MD 597
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 598 NDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTY 639
>gi|168278787|dbj|BAG11273.1| exosome complex exonuclease RRP44 [synthetic construct]
Length = 928
Score = 292 bits (747), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 191/522 (36%), Positives = 270/522 (51%), Gaps = 63/522 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 406
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 310 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 346
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ P++ R+E A T+E + ID W S +P H + G
Sbjct: 347 DKRIPRI-------------RIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVRNLGDV 393
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
GE E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ CI ++DP
Sbjct: 394 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCICSVDPPGC 453
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 454 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 513
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 514 LSSNLCSLKCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTYAEAQLRID----- 568
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
S+N D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 569 -SANM-------------NDDITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 614
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 615 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 674
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 824
L++ T ++ +SL+QA E Y L +L ATR M A YFCSG D
Sbjct: 675 AARSRNLEIKTDTAKSLAESLDQA-ESPTFPY-LNTLLRILATRCMMQAVYFCSG---MD 729
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 730 NDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTY 771
>gi|190014625|ref|NP_001121698.1| exosome complex exonuclease RRP44 isoform b [Homo sapiens]
gi|119600926|gb|EAW80520.1| KIAA1008, isoform CRA_d [Homo sapiens]
Length = 928
Score = 292 bits (747), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 191/522 (36%), Positives = 270/522 (51%), Gaps = 63/522 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 406
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 310 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 346
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ P++ R+E A T+E + ID W S +P H + G
Sbjct: 347 DKRIPRI-------------RIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVRNLGDV 393
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
GE E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ CI ++DP
Sbjct: 394 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCICSVDPPGC 453
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 454 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 513
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 514 LSSNLCSLKCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTYAEAQLRID----- 568
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
S+N D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 569 -SANM-------------NDDITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 614
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 615 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 674
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 824
L++ T ++ +SL+QA E Y L +L ATR M A YFCSG D
Sbjct: 675 AARSRNLEIKTDTAKSLAESLDQA-ESPTFPY-LNTLLRILATRCMMQAVYFCSG---MD 729
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 730 NDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTY 771
>gi|355565272|gb|EHH21761.1| hypothetical protein EGK_04897 [Macaca mulatta]
Length = 580
Score = 291 bits (746), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 196/562 (34%), Positives = 285/562 (50%), Gaps = 55/562 (9%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
IF + E V+E L++G + + R+N EA+ D+ I G+ A+NRA+ G
Sbjct: 49 IFETYMFKEDVSEGLKRGTLIQGVLRINPKKFHEAFIPSPDGDRDIFIDGVVARNRALNG 108
Query: 219 DFVLIKVDRLSLWAKMKGFSNN--SSIVEDSNLPTEANGMHSDICKGKSKVD-----VSY 271
D V++K+ W +K +N+ + +S++P E G H KS D +
Sbjct: 109 DLVVVKLLPEEQWKVVKPENNDKETEAAYESDIPEELCGRHLPQQSLKSYNDSPDVIIEA 168
Query: 272 EYSNCTLLSEKGIHHD---DDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQN 328
++ GI + DD + RE +G P T D T +S +
Sbjct: 169 QFDGSDSEDGHGITQNVLVDDVKKLSVCVSEKGRE-----DGDAPVTKDETTCISQDTRA 223
Query: 329 DGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKK 388
+++R + +VV I+E+ R GFL + A K
Sbjct: 224 LPEKSLQR-------------SAKVVYILEKKHSR-AATGFLKLL------------ADK 257
Query: 389 NRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWN 448
N R+Y +P+ + P++ V +KD P R ++ T L RI +W
Sbjct: 258 NSELF----RKYALFSPSDHRVPRIYVPLKDCPQDFVARPKDYANT----LFICRIVDWK 309
Query: 449 EESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEELL 507
E+ F + G+ GE+EP+ IL E + S FS E L CLP +PW +P EE
Sbjct: 310 EDCNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLECLPQGLPWTIPPEEFS 369
Query: 508 SRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQV 567
R+DLR CIFTIDPSTA DLDDALS + L+DG VGVHIADVSYFV G+ LD A
Sbjct: 370 KRRDLRKDCIFTIDPSTARDLDDALSCKPLADGNFEVGVHIADVSYFVPEGSDLDKVAAE 429
Query: 568 RSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSC 627
R+TSVY++Q+ +PMLP LL EE+ SLNP D+L FS+ W L G ++D W GRT+I SC
Sbjct: 430 RATSVYLVQKVVPMLPRLLCEELCSLNPMSDKLTFSVIWTLTPEGKILDEWFGRTIICSC 489
Query: 628 CKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFT 687
KLSYEHAQ +I+ + + L P + + +V +++ +L++++K L+ +RF
Sbjct: 490 TKLSYEHAQSMIESPTEKIPAKEL----PPISPEHSSEEVHQAVLNLHQIAKQLRQQRFA 545
Query: 688 DGALRLENSKPVFLFD-EYGTP 708
DGALRL+ K F D E G P
Sbjct: 546 DGALRLDQLKLAFTLDHETGLP 567
>gi|355750921|gb|EHH55248.1| hypothetical protein EGM_04408 [Macaca fascicularis]
Length = 580
Score = 291 bits (746), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 196/562 (34%), Positives = 285/562 (50%), Gaps = 55/562 (9%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
IF + E V+E L++G + + R+N EA+ D+ I G+ A+NRA+ G
Sbjct: 49 IFETYMFKEDVSEGLKRGTLIQGVLRINPKKFHEAFIPSPDGDRDIFIDGVVARNRALNG 108
Query: 219 DFVLIKVDRLSLWAKMKGFSNN--SSIVEDSNLPTEANGMHSDICKGKSKVD-----VSY 271
D V++K+ W +K +N+ + +S++P E G H KS D +
Sbjct: 109 DLVVVKLLPEEQWKVVKPENNDKETEAAYESDIPEELCGRHLPQQSLKSYNDSPDVIIEA 168
Query: 272 EYSNCTLLSEKGIHHD---DDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQN 328
++ GI + DD + RE +G P T D T +S +
Sbjct: 169 QFDGSDSEDGHGITQNVLVDDVKKLSVCVSEKGRE-----HGDAPVTKDETTCISQDTRA 223
Query: 329 DGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKK 388
+++R + +VV I+E+ R GFL + A K
Sbjct: 224 LPEKSLQR-------------SAKVVYILEKKHSR-AATGFLKLL------------ADK 257
Query: 389 NRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWN 448
N R+Y +P+ + P++ V +KD P R ++ T L RI +W
Sbjct: 258 NSELF----RKYALFSPSDHRVPRIYVPLKDCPQDFVARPKDYANT----LFICRIVDWK 309
Query: 449 EESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEELL 507
E+ F + G+ GE+EP+ IL E + S FS E L CLP +PW +P EE
Sbjct: 310 EDCNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLECLPQGLPWTIPPEEFS 369
Query: 508 SRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQV 567
R+DLR CIFTIDPSTA DLDDALS + L+DG VGVHIADVSYFV G+ LD A
Sbjct: 370 KRRDLRKDCIFTIDPSTARDLDDALSCKPLADGNFEVGVHIADVSYFVPEGSDLDKVAAE 429
Query: 568 RSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSC 627
R+TSVY++Q+ +PMLP LL EE+ SLNP D+L FS+ W L G ++D W GRT+I SC
Sbjct: 430 RATSVYLVQKVVPMLPRLLCEELCSLNPMSDKLTFSVIWTLTPEGKILDEWFGRTIICSC 489
Query: 628 CKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFT 687
KLSYEHAQ +I+ + + L P + + +V +++ +L++++K L+ +RF
Sbjct: 490 TKLSYEHAQSMIESPTEKIPAKEL----PPISPEHSSEEVHQAVLNLHQIAKQLRQQRFA 545
Query: 688 DGALRLENSKPVFLFD-EYGTP 708
DGALRL+ K F D E G P
Sbjct: 546 DGALRLDQLKLAFTLDHETGLP 567
>gi|325185200|emb|CCA19690.1| hypothetical protein SORBIDRAFT_01g048480 [Albugo laibachii Nc14]
Length = 1066
Score = 291 bits (746), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 191/526 (36%), Positives = 272/526 (51%), Gaps = 51/526 (9%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
P GRV+ I++R R GFL NQ RS+L + P
Sbjct: 394 PCGRVIGIVKRKSR--NFCGFLEPNQ------------STTRSALFL-------FIPMDR 432
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
K PK I+ + + + ++ L+ A ID W +S +P H + G+ +
Sbjct: 433 KIPK-----------IRIKTCQAETLMDQRLLVA-IDSWPVDSKYPLGHYVKTLGKINDK 480
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDL 528
E + +L + I FS E + CLP W++ E R+D R+ I +IDP D+
Sbjct: 481 ETETKVLLLTHDIASDQFSEEVMRCLPPENWKITPENSKGRRDFRHLPIVSIDPPNCKDI 540
Query: 529 DDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSE 588
DDAL RL +G +VGVHIADV++F+ G ALD EA R TS Y++ R++ M P LL+
Sbjct: 541 DDALHACRLPNGNYQVGVHIADVTHFIPSGNALDNEAVSRGTSTYLVDRRLDMFPSLLTT 600
Query: 589 EVGSLNPGVDRLAFSIFWDLNSAG---DVVDRWIGRTVIRSCCKLSYEHAQDIIDGKF-- 643
++ SL D AFS+ W+L ++VD +++IRSC LSY+ AQ +D
Sbjct: 601 KLCSLTSTEDHFAFSVLWELRLTEFDVEIVDVDFCKSIIRSCASLSYQEAQIFLDDPSID 660
Query: 644 DVESSNTLGEGWPQLY-GQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
D+ + L Q G F + IK+L+ ++K LK KR GAL L + + F+
Sbjct: 661 DLSKTEPLDPQRNQREGGNFPTCLIGSGIKTLHVIAKRLKTKRMEAGALTLASPEVRFVL 720
Query: 703 D-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLRE 761
D E P D + D N L EEFMLLAN T A+ I R FP +LLRRHPAP+ R+
Sbjct: 721 DTETQNPLDVQMYALRDTNALVEEFMLLANITVAKKIVRHFPSFSLLRRHPAPSS---RQ 777
Query: 762 FEAFCSKH---GLQLDTSSSGQFHQSLEQARE---KLKDDYVLFDILIN-YATRPMQLAS 814
F+ CS+ G++L +SS Q +SL+ + + +K D L+ TR M A
Sbjct: 778 FDVLCSQAKSIGIELHVNSSKQLQESLDMSAKHSISMKKKKTHLDKLLRIMCTRCMMPAR 837
Query: 815 YFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
YF SG+ ++ HY LA P+YTHFTSP+RRY D+VVHR L AA+
Sbjct: 838 YFSSGEMT-PAEFHHYGLAAPIYTHFTSPIRRYADVVVHRLLAAAI 882
>gi|297265110|ref|XP_001114025.2| PREDICTED: DIS3-like exonuclease 2-like [Macaca mulatta]
Length = 590
Score = 291 bits (746), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 196/562 (34%), Positives = 285/562 (50%), Gaps = 55/562 (9%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
IF + E V+E L++G + + R+N EA+ D+ I G+ A+NRA+ G
Sbjct: 49 IFETYMFKEDVSEGLKRGTLIQGVLRINPKKFHEAFIPSPDGDRDIFIDGVVARNRALNG 108
Query: 219 DFVLIKVDRLSLWAKMKGFSNN--SSIVEDSNLPTEANGMHSDICKGKSKVD-----VSY 271
D V++K+ W +K +N+ + +S++P E G H KS D +
Sbjct: 109 DLVVVKLLPEEQWKVVKPENNDKETEAAYESDIPEELCGRHLPQQSLKSYNDSPDVIIEA 168
Query: 272 EYSNCTLLSEKGIHHD---DDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQN 328
++ GI + DD + RE +G P T D T +S +
Sbjct: 169 QFDGSDSEDGHGITQNVLVDDVKKLSVCVSEKGRE-----DGDAPVTKDETTCISQDTRA 223
Query: 329 DGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKK 388
+++R + +VV I+E+ R GFL + A K
Sbjct: 224 LPEKSLQR-------------SAKVVYILEKKHSR-AATGFLKLL------------ADK 257
Query: 389 NRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWN 448
N R+Y +P+ + P++ V +KD P R ++ T L RI +W
Sbjct: 258 NSELF----RKYALFSPSDHRVPRIYVPLKDCPQDFVARPKDYANT----LFICRIVDWK 309
Query: 449 EESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEELL 507
E+ F + G+ GE+EP+ IL E + S FS E L CLP +PW +P EE
Sbjct: 310 EDCNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLECLPQGLPWTIPPEEFS 369
Query: 508 SRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQV 567
R+DLR CIFTIDPSTA DLDDALS + L+DG VGVHIADVSYFV G+ LD A
Sbjct: 370 KRRDLRKDCIFTIDPSTARDLDDALSCKPLADGNFEVGVHIADVSYFVPEGSDLDKVAAE 429
Query: 568 RSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSC 627
R+TSVY++Q+ +PMLP LL EE+ SLNP D+L FS+ W L G ++D W GRT+I SC
Sbjct: 430 RATSVYLVQKVVPMLPRLLCEELCSLNPMSDKLTFSVIWTLTPEGKILDEWFGRTIICSC 489
Query: 628 CKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFT 687
KLSYEHAQ +I+ + + L P + + +V +++ +L++++K L+ +RF
Sbjct: 490 TKLSYEHAQSMIESPTEKIPAKEL----PPISPEHSSEEVHQAVLNLHQIAKQLRQQRFA 545
Query: 688 DGALRLENSKPVFLFD-EYGTP 708
DGALRL+ K F D E G P
Sbjct: 546 DGALRLDQLKLAFTLDHETGLP 567
>gi|344275370|ref|XP_003409485.1| PREDICTED: exosome complex exonuclease RRP44 isoform 2 [Loxodonta
africana]
Length = 926
Score = 291 bits (745), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 187/522 (35%), Positives = 269/522 (51%), Gaps = 63/522 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 406
+PTGRVV II R+ W Y G S+ D K++R L TP
Sbjct: 310 KPTGRVVGIIRRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 346
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ P++ R+E A T+E + + ID W S +P H + G
Sbjct: 347 DKRIPRI-------------RIETRQASTLEGQRIIVAIDGWPRNSRYPNGHFVKNLGDA 393
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
G+ E + +L E+ + FS LS LP +PW + ++++ R+DLR+ C+ ++DP
Sbjct: 394 GDKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWAITEKDMKYREDLRHLCVCSVDPPGC 453
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
TD+DDAL +L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 454 TDIDDALHCRQLENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 513
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS + SL VDRLAFS W++N +++ ++ I S L+Y AQ ID
Sbjct: 514 LSSNLCSLRCNVDRLAFSCIWEMNHNAEILKTRFTKSAINSKASLTYAEAQMRID----- 568
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
S T+ + D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 569 --STTMND------------DITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 614
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 615 THDPIDMQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 674
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 824
L++ T ++ SL++A E Y L +L ATR M A YFCSG D
Sbjct: 675 AAKSKNLEIKTDTAKSLADSLDKA-ESPTFPY-LNTLLRILATRCMMQAVYFCSG---MD 729
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 730 NDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADSTY 771
>gi|403279048|ref|XP_003931084.1| PREDICTED: exosome complex exonuclease RRP44 [Saimiri boliviensis
boliviensis]
Length = 959
Score = 291 bits (745), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 190/522 (36%), Positives = 271/522 (51%), Gaps = 63/522 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 406
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 340 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 376
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ P++ R+E A T+E + ID W S +P H + G
Sbjct: 377 DKRIPRI-------------RIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVKNLGDV 423
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
GE E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ CI ++DP
Sbjct: 424 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCICSVDPPGC 483
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 484 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 543
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS + SL VDRLAFS W++N + +++ ++VI S L+Y AQ ID
Sbjct: 544 LSSNLCSLKCDVDRLAFSCIWEMNHSAEILKTKFTKSVINSKASLTYAEAQLRID----- 598
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
S+N ++ S++ L +++KILK KR GAL L + + F D E
Sbjct: 599 -SANM-------------RDNITTSLRGLNKLAKILKKKRIEKGALTLSSPEVRFHMDSE 644
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 645 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIYEEFSEHALLRKHPAPPPSNYEILVK 704
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 824
L++ T ++ +SL++A E Y L +L ATR M A YFCSG D
Sbjct: 705 AARSRNLEIKTDTAKSLAESLDRA-ESPTFPY-LNTLLRILATRCMMQAVYFCSG---MD 759
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 760 NDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTY 801
>gi|301093561|ref|XP_002997626.1| exosome complex exonuclease RRP44, putative [Phytophthora infestans
T30-4]
gi|262110016|gb|EEY68068.1| exosome complex exonuclease RRP44, putative [Phytophthora infestans
T30-4]
Length = 1079
Score = 291 bits (745), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 202/548 (36%), Positives = 282/548 (51%), Gaps = 82/548 (14%)
Query: 348 RPTGRVVSIIERSPR---------RDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVP-D 397
+P GRVV II+R+ R RDG+ N G S L VP D
Sbjct: 410 KPAGRVVGIIQRNWRKFCCSLEAPRDGVT--------LNASG----------SCLVVPVD 451
Query: 398 REYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAH 457
R K PK IK + + +A ++ ++ A ID W S FP H
Sbjct: 452 R----------KVPK-----------IKIQTRQQEALMDKRVLVA-IDSWPAYSKFPLGH 489
Query: 458 VLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCI 517
+ G G+ E + +L E+ I C FS E + CLP W++ E R+DLR+ +
Sbjct: 490 YVRTLGVIGDKETETTVLLLEHDIPCDQFSDEVMRCLPAEDWKITPENASGRRDLRDLPV 549
Query: 518 FTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 577
+IDP D+DDAL + L +G +VGVHIADV++FV PG+ALD EA R TS Y++ R
Sbjct: 550 CSIDPPNCKDIDDALHAKLLPNGNLQVGVHIADVTHFVAPGSALDEEAADRGTSTYLVDR 609
Query: 578 KIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAG----DVVDRWIGRTVIRSCCKLSYE 633
++ MLP LL+ ++ SL D AFS+ W+L G VVD +++IRS LSY+
Sbjct: 610 RLDMLPGLLTTKLCSLTDVEDHFAFSVLWELQLVGQSDVQVVDVQFCKSLIRSVASLSYQ 669
Query: 634 HAQDIIDGKFDVESSNTLGEGWP-------QLYGQFEWSDVVRS-IKSLYEVSKILKDKR 685
AQ+ +D D E+ G+ + QFE ++ S IK+L ++ L+ KR
Sbjct: 670 QAQEFLD---DPEAGGVYGQDSTLKKKKKGESDEQFERRQLLGSGIKTLNTIATRLRAKR 726
Query: 686 FTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPD 744
GAL L + + F+ D E P D + D N L EEFMLLAN T A+ I R FP
Sbjct: 727 IEAGALTLASPEVRFVLDTETQNPLDVQMYTLRDTNALVEEFMLLANITVAKKIVRHFPT 786
Query: 745 SALLRRHPAPNMRKLREFEAFCSKH---GLQLDTSSSGQFHQSLEQAREKL--------- 792
++LRRHPAP+ R+F+ CS+ G++L +S Q SL+ A ++
Sbjct: 787 FSMLRRHPAPSK---RQFDLLCSQAKAVGVELHVDTSKQLQDSLDAADKEAAGSKRKHGD 843
Query: 793 KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 852
K + +L TR M ASYF SG+ ++ HY LA P+YTHFTSP+RRY D+VV
Sbjct: 844 KANPYFNKLLRIMTTRCMMPASYFSSGEVA-PPEFHHYGLAAPIYTHFTSPIRRYADVVV 902
Query: 853 HRTLNAAL 860
HR L AA+
Sbjct: 903 HRLLAAAI 910
>gi|156544750|ref|XP_001605998.1| PREDICTED: DIS3-like exonuclease 2-like [Nasonia vitripennis]
Length = 961
Score = 291 bits (745), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 182/527 (34%), Positives = 280/527 (53%), Gaps = 47/527 (8%)
Query: 350 TGRVVSIIERS-PRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
TG V+SI+E++ PR+ VG+L F + L P
Sbjct: 332 TGTVLSILEKAHPRK--AVGYLKKQDVFVF------------------------LQPRDS 365
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ P++ + P ++ K + + L I +W + + F + ++ + G G++
Sbjct: 366 RVPQLRIN----PKTVPKHFYDNPDQFKETLFLCDIVDWKKVA-FAEGEIVQIVGSKGDL 420
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDL 528
+ AIL EN + + + E L LP + + +L R+DLR CIFTIDP+TA DL
Sbjct: 421 SVETKAILLENDLILTPYEDELLQDLPPSDYIPTEADLADREDLRETCIFTIDPATAVDL 480
Query: 529 DDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSE 588
DDA+S + L +G VG+HIADV++F+ + LD + R+T+VYM+ MLP L
Sbjct: 481 DDAMSCKLLENGNFEVGIHIADVTHFLEAFSPLDKKVAERATTVYMVDNVYHMLPKQLCL 540
Query: 589 EVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESS 648
SL PG D+LAFS+ ++ + ++V +TVI SCC+++Y AQ +ID ES
Sbjct: 541 AC-SLLPGQDKLAFSVILEMTPSAEIVSSRFAKTVINSCCQMAYGQAQIMIDD----ESY 595
Query: 649 NTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFLFDEYGT 707
+ +G + G ++ SD+V+ +++LY +S LK KRF +GALR++ K VFL +
Sbjct: 596 DWEKDGSLTIAGNYKPSDLVKVVRNLYNISMELKRKRFDEGALRIDQPKLIVFLDKDTRL 655
Query: 708 PYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCS 767
P L R + N L EEFMLLAN T A+ + P+ +LLR HP P+MR L++
Sbjct: 656 PSSYKLEERIESNSLIEEFMLLANMTVAKYLYETLPEVSLLRSHPEPSMRILQKTRNLLK 715
Query: 768 KHGLQLDTSSSGQFHQSLEQAREKLKD-------DYVLFDILI--NYATRPMQLASYFCS 818
K G+ LD S+G H++L + + L D D +++++ + + M A Y CS
Sbjct: 716 KFGVHLDVESAGTLHKTLSKYQVNLNDSGNDGSLDVAYYNMMVINSLCAKSMTRAVYKCS 775
Query: 819 GDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 865
K HYAL YTHFTSP+RRYPD VVHR L A+++ + L
Sbjct: 776 ASVKTKEALRHYALNAEYYTHFTSPIRRYPDCVVHRLLYASIKNQPL 822
>gi|114650043|ref|XP_509678.2| PREDICTED: exosome complex exonuclease RRP44 isoform 2 [Pan
troglodytes]
gi|397514450|ref|XP_003827499.1| PREDICTED: exosome complex exonuclease RRP44 isoform 1 [Pan
paniscus]
gi|410219622|gb|JAA07030.1| DIS3 mitotic control homolog [Pan troglodytes]
gi|410257840|gb|JAA16887.1| DIS3 mitotic control homolog [Pan troglodytes]
gi|410299634|gb|JAA28417.1| DIS3 mitotic control homolog [Pan troglodytes]
gi|410349373|gb|JAA41290.1| DIS3 mitotic control homolog [Pan troglodytes]
Length = 958
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 190/522 (36%), Positives = 270/522 (51%), Gaps = 63/522 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 406
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 340 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 376
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ P++ R+E A T+E + ID W S +P H + G
Sbjct: 377 DKRIPRI-------------RIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVRNLGDV 423
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
GE E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ CI ++DP
Sbjct: 424 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCICSVDPPGC 483
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 484 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 543
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 544 LSSNLCSLKCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTYAEAQLRID----- 598
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
S+N D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 599 -SANM-------------NDDITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 644
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 645 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 704
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 824
L++ T ++ +SL++A E Y L +L ATR M A YFCSG D
Sbjct: 705 AARSRNLEIKTDTAKSLAESLDRA-ESPTFPY-LNTLLRILATRCMMQAVYFCSG---MD 759
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 760 NDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTY 801
>gi|340507482|gb|EGR33437.1| rnb family protein, putative [Ichthyophthirius multifiliis]
Length = 947
Score = 291 bits (744), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 183/520 (35%), Positives = 271/520 (52%), Gaps = 57/520 (10%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYI-QLTPTH 407
P G+V II+R R G +N +N L++ + +I + P
Sbjct: 341 PQGKVKGIIKRVQR--FFCGQIN---------------NENIDQLNISNNIFIREFIPVD 383
Query: 408 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 467
+YP + + + KR++ D W + S +P H + G G+
Sbjct: 384 SRYPNFYIKTTNPQNLEDKRIQ------------IVFDNWPKNSKYPFGHFKMLIGPSGD 431
Query: 468 VEPQINAILYENAICCSGFSPESLSCLP--CVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
+ + + IL E+ + FS + L CLP W++PQ E R DLR+ + +IDP
Sbjct: 432 IHTEGDVILLEHGVEYRQFSKQVLDCLPQEGSNWKIPQSEFSKRVDLRHLKVCSIDPIGC 491
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
D+DDAL +L G VGVHIADVS+FV + +D EAQ R T+VY++ R+ MLP L
Sbjct: 492 KDIDDALHCIKLPSGNYEVGVHIADVSHFVKANSPIDKEAQNRCTTVYLVDRRTDMLPKL 551
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
L+E + SL +RL+FS+ W+++ G+++ ++VI S L+Y+ AQ++ID K D
Sbjct: 552 LTETLCSLKDDGERLSFSVVWEIDPEGNIIQTRYHKSVIHSVASLNYQQAQNMIDNKND- 610
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF-DE 704
NT ++ SI+ L ++K LK KR +GAL L +++ F F DE
Sbjct: 611 ---NT---------------ELTNSIRYLNLLAKKLKAKRIQNGALSLASTQVKFSFDDE 652
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D D N L EEFMLLAN + A+ I FP ++LR+H P ++++E +
Sbjct: 653 THNPIDVSFYQMYDTNSLIEEFMLLANVSVAQKIIDHFPSISILRQHQQPKQKQIKELAS 712
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKD 823
SK G LD SS+ SL+Q +D+ F+ LI TR M A Y C+ D D
Sbjct: 713 ILSKIGYNLDFSSNKNLAHSLDQIN---RDNDSFFNKLIRIMTTRAMNEAVYLCTAD-AD 768
Query: 824 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE 863
TD+ HY LA P+YTHFTSP+RRY D++VHR L AA++ E
Sbjct: 769 YTDFYHYGLAAPLYTHFTSPIRRYADILVHRLLAAAIDLE 808
>gi|66828537|ref|XP_647622.1| hypothetical protein DDB_G0268186 [Dictyostelium discoideum AX4]
gi|60475611|gb|EAL73546.1| hypothetical protein DDB_G0268186 [Dictyostelium discoideum AX4]
Length = 1504
Score = 291 bits (744), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 185/532 (34%), Positives = 278/532 (52%), Gaps = 54/532 (10%)
Query: 347 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 406
K PTG+V+ I +R+ W +Y G +KN S + ++ + P
Sbjct: 577 KIPTGKVIGIFQRN--------------WRDYIGT----VEKNTSLFT----NFLMIVPF 614
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 466
+ P + V K+ + KRL R+D W+ S +P H + G G
Sbjct: 615 DYRIPLIRVPTKNPSQYLGKRL------------VIRMDSWDLNSNYPMGHYVSSIGESG 662
Query: 467 EVEPQINAILYENAICCSGFSPESLSCLP----CVPWEVPQEELLSRKDLRNFCIFTIDP 522
+E +++A++ E+ I + L CLP PW++P EE R+ L N I +IDP
Sbjct: 663 SLETELSALMVEHDISLKQWPQSILKCLPESSDQSPWQIPPEEKAYRRQLTNHHIMSIDP 722
Query: 523 STATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPML 582
+ D+DDA+SI ++ I +GVHIADVS+FV G+ LD+EA+ R T++Y+ R+ ML
Sbjct: 723 LGSKDIDDAISIGYPTNDIIEIGVHIADVSHFVKEGSPLDLEAKRRGTTIYLPDRRFDML 782
Query: 583 PVLLSEEVGSLNPGVDRLAFSIFWDL----NSAGDVVDRWIGRTVIRSCCKLSYEHAQDI 638
P +LSE+V SL G+ R A S+ W N ++VD W GRT+I S +L Y+ AQDI
Sbjct: 783 PAVLSEDVCSLRGGLPRCAMSVVWQFKRNPNKTYEIVDTWFGRTIIHSSAELHYQLAQDI 842
Query: 639 IDGKF----DVESSNTLG---EGWP-QLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGA 690
IDGK D +S T G G+ +++ SD+ + + L + + LK +R +GA
Sbjct: 843 IDGKIVDGKDKDSDVTGGGARAGYKHRIFNGITISDIKKDLLELCSIFRQLKKERVKNGA 902
Query: 691 LRLENSKPVFLFD--EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALL 748
L LE+ + F F+ + P +L +++ L E+M+LAN A I FP SALL
Sbjct: 903 LELESIEVRFKFNSKDSSQPKKIILKNDLEIHHLVAEYMILANSHVATKIHSVFPSSALL 962
Query: 749 RRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATR 808
RRHP PN + +++ S G QL T ++ Q +SL A + D YV IL
Sbjct: 963 RRHPKPNQIDFKSIKSYFSYCGFQLLTKTNKQLQESLASAVDSGGDVYV-NKILKLKIVN 1021
Query: 809 PMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
+ A YF +G + +++ HY LA YTHFTSP+RRY D++VHR L +L
Sbjct: 1022 VVSEAVYFSTGSV-NVSEFYHYGLAIDKYTHFTSPIRRYSDIIVHRQLWNSL 1072
>gi|290982053|ref|XP_002673745.1| predicted protein [Naegleria gruberi]
gi|284087331|gb|EFC41001.1| predicted protein [Naegleria gruberi]
Length = 815
Score = 291 bits (744), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 188/535 (35%), Positives = 282/535 (52%), Gaps = 38/535 (7%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 407
+PTGRVV+I E+S +RD VGFL SR++ +++ ++ P
Sbjct: 179 QPTGRVVAIKEKSKKRD-FVGFLTT---------SRENGVIDQAD------QHCIFIPLD 222
Query: 408 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 467
+ P+MVV + P+S K G MEL + WNE+S P ++ GR G
Sbjct: 223 KRCPRMVVPLSQCPESFKTN-PNGHG---MELYVVQFVTWNEKSTLPYGKLIKHLGRAGN 278
Query: 468 VEPQINAILYENAICCSGFSPE-------SLSCLPCVPWEVPQEELLSRKDLRNFCIFTI 520
+E + +I+ + + S ++ + L+ W +P EEL RKD R +FTI
Sbjct: 279 LETDLESIIIDFEVDTSSYTEKVIDEIKSDLNIQSTNDWTIPVEELEKRKDARGERVFTI 338
Query: 521 DPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIP 580
DP A DLDDA+SI +L+D + RVG+HIAD SYFV G+ LD AQ R+TSVY+ +P
Sbjct: 339 DPKHAKDLDDAISISKLNDNLFRVGIHIADASYFVAAGSKLDRIAQRRATSVYLEHLIVP 398
Query: 581 MLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV---DRWIGRTVIRSCCKLSYEHAQD 637
MLP LS+++ SL P DRLAFSI+ L++ G++V + ++V+RSC KLSYE AQ
Sbjct: 399 MLPHFLSDDICSLLPSKDRLAFSIYVLLDANGELVKDQESVFQKSVVRSCAKLSYEIAQQ 458
Query: 638 IIDG--KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLEN 695
+I G K D E S + ++ +V I L++++ ++ R G L L
Sbjct: 459 VIGGEIKSDSEISQDICPREGDIFCPNLGGSLVEDITMLHKLAMKRRESRLESGTLSLNK 518
Query: 696 SKPVFLFDEYGTPYDSV-LSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAP 754
+ E S+ + ++ N + EE MLLAN AAE + ++ D+ LLR H +P
Sbjct: 519 PRIQLELSEDNQSVKSINVKEEKESNNMIEELMLLANYLAAEKLLKSSNDTVLLRSHGSP 578
Query: 755 NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLAS 814
+K+ +F FC+ L ++ S+ + SL D + ++ AT+ MQ A
Sbjct: 579 LEKKMSDFIDFCNSAKLDINVESAAELDNSLRSIT-----DTEVSAVVNLEATKAMQTAK 633
Query: 815 YFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKH 869
YF D + HYAL P YTHFTSP+RRY D++VHR L +AL A + + +
Sbjct: 634 YFAYSDKNNCLSTHHYALNVPYYTHFTSPIRRYSDIIVHRQLESALFASPIPYTY 688
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 131 EPIANDSSCWAYTNKDDNPSHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNR 190
EP +D + + D +H+S + F + + V E L+ G F+ + VN NR
Sbjct: 29 EPGCDDGNVNENKRRGDRKNHKSSSSKSRFVEYITPSEVQEGLKSGTLFEGILHVNQQNR 88
Query: 191 LEAYCKIEGV-------QTDVLITGIAAQNRAVEGDFVLIKVDRLSLWAKMK 235
A+ ++ DV I+G A +NRA+ GD V+IK+D S W + K
Sbjct: 89 QLAFVVLDDPVKQKLQHDMDVRISGEARRNRALHGDKVVIKIDERSEWTERK 140
>gi|426375656|ref|XP_004054641.1| PREDICTED: exosome complex exonuclease RRP44 isoform 1 [Gorilla
gorilla gorilla]
Length = 958
Score = 291 bits (744), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 190/522 (36%), Positives = 270/522 (51%), Gaps = 63/522 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 406
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 340 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 376
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ P++ R+E A T+E + ID W S +P H + G
Sbjct: 377 DKRIPRI-------------RIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVRNLGDV 423
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
GE E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ CI ++DP
Sbjct: 424 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCICSVDPPGC 483
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 484 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 543
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 544 LSSNLCSLKCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTYAEAQLRID----- 598
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
S+N D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 599 -SANM-------------NDDITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 644
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 645 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 704
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 824
L++ T ++ +SL++A E Y L +L ATR M A YFCSG D
Sbjct: 705 AARSRNLEIKTDTAKSLAESLDRA-ESPTFPY-LNTLLRILATRCMMQAVYFCSG---MD 759
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 760 NDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTY 801
>gi|395527441|ref|XP_003765855.1| PREDICTED: exosome complex exonuclease RRP44 [Sarcophilus harrisii]
Length = 959
Score = 291 bits (744), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 190/523 (36%), Positives = 270/523 (51%), Gaps = 65/523 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 407
+P+GRVV II+R+ R G L S+ D K++R L TP
Sbjct: 341 KPSGRVVGIIKRNWR--PFCGML-----------SKSDIKESRRHL---------FTPAD 378
Query: 408 PKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 466
+ P++ R+E A T+E + + ID W + S +P H + G G
Sbjct: 379 KRIPRI-------------RIETRQASTLEGQRIIVAIDGWPKNSRYPNGHFVKNLGAVG 425
Query: 467 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 526
+ E + +L E+ + FS LS LP +PW + +E++ +R+DLR+ C+ ++DP T
Sbjct: 426 DKETETEVLLLEHDVPHQPFSQSVLSFLPKMPWSITEEDMKNREDLRHLCVCSVDPPKCT 485
Query: 527 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 586
D+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P LL
Sbjct: 486 DIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESAKRGTTVYLCEKRIDMVPELL 545
Query: 587 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 646
S + SL VDRLAFS W++N +++ ++ I S L+Y AQ ID
Sbjct: 546 SSNLCSLRSNVDRLAFSCIWEMNHNAEILKTRFTKSAINSKASLTYAEAQMRID------ 599
Query: 647 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EY 705
S T+ + D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 600 -SATMND------------DITTSLRGLNKLAKILKRRRIDAGALILSSPEVRFHVDSET 646
Query: 706 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAF 765
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 647 HDPIDLQTKELRETNSMVEEFMLLANVSVAKKIHEEFSEHALLRKHPAPPPSNYEVLIKA 706
Query: 766 CSKHGLQLDTSSSGQFHQSLEQAREKLKDDYV--LFDILINYATRPMQLASYFCSGDFKD 823
L T S+ SL+Q E Y+ LF IL ATR M A YFCSG
Sbjct: 707 AKSKNLDFKTDSAKALADSLDQV-ESPNFPYLNTLFRIL---ATRCMMQAVYFCSG---M 759
Query: 824 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
D D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 760 DNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADSTY 802
>gi|241693025|ref|XP_002412965.1| salivary protein Is3, putative [Ixodes scapularis]
gi|215506779|gb|EEC16273.1| salivary protein Is3, putative [Ixodes scapularis]
Length = 956
Score = 291 bits (744), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 188/522 (36%), Positives = 265/522 (50%), Gaps = 59/522 (11%)
Query: 347 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 406
K PTGR+V I+ R R + + Q N K +R P
Sbjct: 334 KVPTGRIVGILRRKWR-----PYCGILQPSNIKEATRH-----------------LFVPA 371
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 466
+ PK I+ + D +V + ID W +S +PQ H++ G G
Sbjct: 372 ERRIPK-----------IRIETRQADVLCRQRIVVS-IDSWPRDSRYPQGHLVKALGEVG 419
Query: 467 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 526
+ + +L E+ I FS L CLP +PW + +E +R+DLR+ CI ++DP T
Sbjct: 420 DRATENQVLLLEHDIPHQCFSRSVLDCLPSLPWTIGPKEEKNREDLRHLCICSVDPPGCT 479
Query: 527 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 586
D+DDAL L +G VGVHIADVSYFV PGTALD EA R T+VY++ ++I M+P LL
Sbjct: 480 DIDDALHCRELPNGNYEVGVHIADVSYFVRPGTALDKEAANRGTTVYLVDQRIDMVPELL 539
Query: 587 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 646
S + SL G +RLAFS W+++ +V+ +++I+S L+Y AQ ID D
Sbjct: 540 SANLCSLRGGEERLAFSAIWEVSPEAEVLHTKFHKSIIKSRAALTYAEAQARID---DTS 596
Query: 647 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EY 705
++ L G ++ L ++KILK KR +GAL L +S+ F D E
Sbjct: 597 LNDELTLG----------------LRGLNRLAKILKAKRIANGALTLASSEVRFHVDSET 640
Query: 706 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAF 765
P D + N + EEFMLLAN + A I + FP+ ALLRRHPAP L
Sbjct: 641 HDPIDVQTKQLLETNSMVEEFMLLANASVARHIFQEFPECALLRRHPAPAPANLEPLVKA 700
Query: 766 CSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINY-ATRPMQLASYFCSGDFKDD 824
G ++ S + +SL++A + + F++++ ATR M A YFCSG +
Sbjct: 701 GHSKGFVVEVESGLRLAESLDRA---VDPEQPYFNVMLRMVATRCMARALYFCSGCVAPE 757
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
D+ HY LA P YTHFTSP+RRY DL+VHR L + AE Y
Sbjct: 758 -DFDHYGLAMPFYTHFTSPIRRYSDLMVHRLLGVCVGAEATY 798
>gi|224043479|ref|XP_002197213.1| PREDICTED: exosome complex exonuclease RRP44 [Taeniopygia guttata]
Length = 964
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 187/521 (35%), Positives = 269/521 (51%), Gaps = 61/521 (11%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 406
RPTGRVV II+R+ W Y G S+ K+ R L TP
Sbjct: 345 RPTGRVVGIIKRN--------------WRPYCGMLSKSQIKEARRHL---------FTPA 381
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 466
+ P+ I+ + DA +E + + ID W S +P H + G G
Sbjct: 382 DRRIPR-----------IRIETRQADA-LEGQRIIVAIDGWPRNSRYPNGHFVKNLGSAG 429
Query: 467 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 526
+ E + +L E+ + FS LS LP +PW + +E++ R+DLR+ + ++DP T
Sbjct: 430 DKETETEVLLLEHDVPHQAFSQAVLSFLPKMPWSITEEDMKHREDLRHLNVCSVDPPGCT 489
Query: 527 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 586
D+DDAL + +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P LL
Sbjct: 490 DIDDALHCREIGNGNLEVGVHIADVSHFIRPGNALDEESVKRGTTVYLCEKRIDMVPELL 549
Query: 587 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 646
S + SL VDRLAFS W++N +++ +++I S L+Y AQ ID
Sbjct: 550 SSNLCSLRSNVDRLAFSCIWEMNHKAEILKTRFTKSIINSRASLTYAEAQMRID------ 603
Query: 647 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EY 705
S T+ + D+ S++ L +++KILK KR +GAL L + + F D E
Sbjct: 604 -SATMND------------DITTSLRGLNKLAKILKKKRIDNGALTLASPEVRFHMDSET 650
Query: 706 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAF 765
P D ++ N + EEFMLLAN + A+ I FP+ ALLR+HPAP
Sbjct: 651 HDPIDLQTKELKETNSMVEEFMLLANISVAQKIYDEFPEFALLRKHPAPPPSNYDILVKA 710
Query: 766 CSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDT 825
L++ T S+ +SL++A E Y L +L TR M A YFCSG D
Sbjct: 711 AKSKNLEIKTDSAKALAESLDKA-ESPTFPY-LNTLLRILTTRCMMQAVYFCSG---MDN 765
Query: 826 DWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 766 DFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADSTY 806
>gi|348583824|ref|XP_003477672.1| PREDICTED: exosome complex exonuclease RRP44-like [Cavia porcellus]
Length = 958
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 190/522 (36%), Positives = 268/522 (51%), Gaps = 63/522 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDA-KKNRSSLSVPDREYIQLTPT 406
RPTGRVV II+R+ W Y G K A K++R L TP
Sbjct: 340 RPTGRVVGIIKRN--------------WRPYCGMLSKSAIKESRRHL---------FTPA 376
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDAT-IEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ P++ R+E A+ +E + ID W S +P H + G
Sbjct: 377 DKRIPRI-------------RIETRQASALEGRRIIVAIDGWPRNSRYPNGHFVRNLGDV 423
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
GE E + +L E+ + FS LS LP +PW + + ++ +R+DLR+ C+ ++DP
Sbjct: 424 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITENDMKNREDLRHLCVCSVDPPGC 483
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 484 TDIDDALHCRELKNGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 543
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 544 LSSNLCSLRCNVDRLAFSCIWEMNHNAEILKTRFTKSVINSKASLTYAEAQMRID----- 598
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
S T+ + D+ S++ L +++KILK R GAL L + + F D E
Sbjct: 599 --SATMND------------DITTSLRGLNKLAKILKKGRIEKGALTLSSPEVRFHMDSE 644
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 645 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEVLVK 704
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 824
L++ T ++ SL++A E L Y L +L ATR M A YFCSG D
Sbjct: 705 AAKSKNLEIKTDTARSLADSLDRA-ESLAFPY-LNTLLRILATRCMMQAVYFCSG---MD 759
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 760 NDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTY 801
>gi|426375658|ref|XP_004054642.1| PREDICTED: exosome complex exonuclease RRP44 isoform 2 [Gorilla
gorilla gorilla]
Length = 928
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 190/522 (36%), Positives = 270/522 (51%), Gaps = 63/522 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 406
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 310 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 346
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ P++ R+E A T+E + ID W S +P H + G
Sbjct: 347 DKRIPRI-------------RIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVRNLGDV 393
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
GE E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ CI ++DP
Sbjct: 394 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCICSVDPPGC 453
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 454 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 513
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 514 LSSNLCSLKCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTYAEAQLRID----- 568
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
S+N D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 569 -SANM-------------NDDITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 614
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 615 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 674
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 824
L++ T ++ +SL++A E Y L +L ATR M A YFCSG D
Sbjct: 675 AARSRNLEIKTDTAKSLAESLDRA-ESPTFPY-LNTLLRILATRCMMQAVYFCSG---MD 729
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 730 NDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTY 771
>gi|332216686|ref|XP_003257481.1| PREDICTED: exosome complex exonuclease RRP44 isoform 1 [Nomascus
leucogenys]
Length = 958
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 189/522 (36%), Positives = 271/522 (51%), Gaps = 63/522 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 406
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 340 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 376
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ P++ R+E A T+E + ID W S +P H + G
Sbjct: 377 DKRIPRI-------------RIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVKNLGDV 423
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
GE E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ C+ ++DP
Sbjct: 424 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCVCSVDPPGC 483
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 484 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 543
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS + SL VDRLAFS W+++ +++ ++VI S L+Y AQ ID
Sbjct: 544 LSSNLCSLKCDVDRLAFSCIWEMSHNAEILKTKFTKSVINSKASLTYAEAQLRID----- 598
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
S+N D+ S+++L +++KILK +R GAL L + + F D E
Sbjct: 599 -SANM-------------NDDITTSLRALNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 644
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 645 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 704
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 824
L++ T ++ +SL+QA E Y L +L ATR M A YFCSG D
Sbjct: 705 AARSRNLEIKTDTAKSLAESLDQA-ESPTFPY-LNTLLRILATRCMMQAVYFCSG---MD 759
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 760 NDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTY 801
>gi|383411071|gb|AFH28749.1| exosome complex exonuclease RRP44 isoform a [Macaca mulatta]
gi|387541500|gb|AFJ71377.1| exosome complex exonuclease RRP44 isoform a [Macaca mulatta]
Length = 958
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 189/522 (36%), Positives = 270/522 (51%), Gaps = 63/522 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 406
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 340 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 376
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ P++ R+E A T+E + ID W S +P H + G
Sbjct: 377 DKRIPRI-------------RIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVRNLGDV 423
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
GE E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ C+ ++DP
Sbjct: 424 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCVCSVDPPGC 483
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 484 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 543
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 544 LSSNLCSLKCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTYAEAQLRID----- 598
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
S+N D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 599 -SANM-------------NDDITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 644
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 645 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 704
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 824
L++ T ++ +SL++A E Y L +L ATR M A YFCSG D
Sbjct: 705 AARSRNLEIKTDTAKSLAESLDRA-ESPTFPY-LNTLLRILATRCMMQAVYFCSG---MD 759
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 760 NDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAVGADCTY 801
>gi|167519679|ref|XP_001744179.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777265|gb|EDQ90882.1| predicted protein [Monosiga brevicollis MX1]
Length = 951
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 172/444 (38%), Positives = 243/444 (54%), Gaps = 24/444 (5%)
Query: 424 IKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICC 483
I+ R ++ D + ++V A +D W S +P H++ V G G+V + +L E+A+
Sbjct: 365 IRFRSQQPDKLVGQQIVLA-VDGWPTNSKYPIGHLVRVLGPIGDVNTETEVVLLEHAVPF 423
Query: 484 SGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISR 543
FS L CLP W +++L R+DLR+ + +IDP TD+DDAL + L +G
Sbjct: 424 EPFSKAVLDCLPDATWLAAEQDLSRREDLRHLEVCSIDPPGCTDIDDALHLRDLPNGHFE 483
Query: 544 VGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFS 603
VGVHIADVS+F+ P TALD EA R T+VY+ R+I M+P LLS + SL G +R AFS
Sbjct: 484 VGVHIADVSHFIKPNTALDQEAAKRGTTVYLSNRRIDMVPGLLSSNLCSLRGGEERFAFS 543
Query: 604 IFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFE 663
W++ D++ +++IRS L Y AQ ID + D Q
Sbjct: 544 CIWEMTDQADIISTRFCKSIIRSRAALEYSEAQARIDDETD----------------QTT 587
Query: 664 WSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFL 722
+D +R + +L +KI+K +R GAL L + + F D E P D + D N L
Sbjct: 588 LTDSIRRLNAL---AKIVKRRRIEAGALMLASPEVRFRIDTETHDPVDVQMKQLHDTNSL 644
Query: 723 FEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFH 782
EEFMLLAN ++A I + FP A+LRRHPAP G+ L T+SS +
Sbjct: 645 VEEFMLLANVSSAREIHKQFPTCAVLRRHPAPPPSNFEPLLKAAEAAGVTLSTTSSKELA 704
Query: 783 QSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTS 842
SL+ A+ + + + +L ATR M A YFCSG T++GHY LA P+YTHFTS
Sbjct: 705 VSLDMAQPEGQP--YMNTLLRILATRCMLPAQYFCSGTVP-QTEFGHYGLASPIYTHFTS 761
Query: 843 PLRRYPDLVVHRTLNAALEAEKLY 866
P+RRY DL+VHR L A + A+ Y
Sbjct: 762 PIRRYADLLVHRLLAACIGADPTY 785
>gi|109120931|ref|XP_001083933.1| PREDICTED: exosome complex exonuclease RRP44-like isoform 4 [Macaca
mulatta]
Length = 948
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 189/522 (36%), Positives = 270/522 (51%), Gaps = 63/522 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 406
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 330 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 366
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDAT-IEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ P++ R+E A+ +E + ID W S +P H + G
Sbjct: 367 DKRIPRI-------------RIETRQASALEGRRIIVAIDGWPRNSRYPNGHFVRNLGDV 413
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
GE E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ CI ++DP
Sbjct: 414 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCICSVDPPGC 473
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 474 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 533
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 534 LSSNLCSLKCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTYAEAQLRID----- 588
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
S+N D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 589 -SANM-------------NDDITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 634
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 635 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 694
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 824
L++ T ++ +SL++A E Y L +L ATR M A YFCSG D
Sbjct: 695 AARSRNLEIKTDTAKSLAESLDRA-ESPTFPY-LNTLLRILATRCMMQAVYFCSG---MD 749
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 750 NDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAVGADSTY 791
>gi|397514452|ref|XP_003827500.1| PREDICTED: exosome complex exonuclease RRP44 isoform 2 [Pan
paniscus]
gi|410219620|gb|JAA07029.1| DIS3 mitotic control homolog [Pan troglodytes]
gi|410257838|gb|JAA16886.1| DIS3 mitotic control homolog [Pan troglodytes]
gi|410299632|gb|JAA28416.1| DIS3 mitotic control homolog [Pan troglodytes]
gi|410349371|gb|JAA41289.1| DIS3 mitotic control homolog [Pan troglodytes]
Length = 928
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 190/522 (36%), Positives = 270/522 (51%), Gaps = 63/522 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 406
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 310 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 346
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ P++ R+E A T+E + ID W S +P H + G
Sbjct: 347 DKRIPRI-------------RIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVRNLGDV 393
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
GE E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ CI ++DP
Sbjct: 394 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCICSVDPPGC 453
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 454 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 513
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 514 LSSNLCSLKCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTYAEAQLRID----- 568
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
S+N D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 569 -SANM-------------NDDITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 614
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 615 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 674
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 824
L++ T ++ +SL++A E Y L +L ATR M A YFCSG D
Sbjct: 675 AARSRNLEIKTDTAKSLAESLDRA-ESPTFPY-LNTLLRILATRCMMQAVYFCSG---MD 729
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 730 NDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTY 771
>gi|157118647|ref|XP_001659195.1| ribonuclease [Aedes aegypti]
gi|108883257|gb|EAT47482.1| AAEL001397-PA [Aedes aegypti]
Length = 1210
Score = 290 bits (742), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 170/473 (35%), Positives = 261/473 (55%), Gaps = 13/473 (2%)
Query: 395 VPDREYIQLTPTHPKYPKMVVLVKDLPDSI-KKRLEEGDATIEMELVAARIDEWNEESPF 453
V +Y++ P + P M V ++ P++I K +E IE + A I EW+ + P
Sbjct: 560 VSQSQYMKFAPRDMRMPFMRVYKQNWPEAIFKNDFKE----IESVIYQAEIIEWHNDIPI 615
Query: 454 PQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLR 513
A+++ G+ GE+E + AIL E + S +S + L+ LP +++P+EEL R+DLR
Sbjct: 616 --ANIMKSIGKCGELEVESQAILVEYDLDVSPYSEKILNSLPGSEFQIPEEELAKREDLR 673
Query: 514 NFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVY 573
+ C+FTIDP TA DLDDALS + L +G +GVHI+DVSYF+ + LD ++R+TS+Y
Sbjct: 674 DECVFTIDPLTARDLDDALSCKILKNGNYEIGVHISDVSYFLREASELDELVKLRATSIY 733
Query: 574 MLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYE 633
M+ MLP L + SL PG D+LAFS+FW++ V+ +TVI SC +L+YE
Sbjct: 734 MVDGVYHMLPKSLC-FLCSLLPGEDKLAFSVFWEITPDAKVLKTRFAKTVINSCTQLAYE 792
Query: 634 HAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRL 693
HAQ ++D + + E +PQ+ + + + R + L ++ + +R +G L++
Sbjct: 793 HAQIMLDKP----NQDLKVEDFPQIRHGYTPNYLSRIVNQLQSIAVQFRARRMANGNLKI 848
Query: 694 ENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHP 752
K F D G P D + N + E+FMLLAN + AE F +++LR H
Sbjct: 849 NQPKLSFSLDPNTGKPTDFAIYELRTANQMIEDFMLLANASVAEFTHAKFDSTSVLRNHF 908
Query: 753 APNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQL 812
AP +++ +KHG L SS +S+E + D +L +PM
Sbjct: 909 APQDYQMKHLAKQLAKHGHSLRIDSSKAIAESVESIVDASSDPIAARAVLNIMIAKPMTR 968
Query: 813 ASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 865
A YFCS D ++ H+ALA P+YTHFTSP+RRY D +VHR L AL +++
Sbjct: 969 ARYFCSAFASDPEEFHHFALAIPMYTHFTSPIRRYADCLVHRVLAGALAVDEV 1021
>gi|410047814|ref|XP_003952453.1| PREDICTED: exosome complex exonuclease RRP44 [Pan troglodytes]
Length = 928
Score = 290 bits (742), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 190/522 (36%), Positives = 270/522 (51%), Gaps = 63/522 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 406
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 310 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 346
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ P++ R+E A T+E + ID W S +P H + G
Sbjct: 347 DKRIPRI-------------RIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVRNLGDV 393
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
GE E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ CI ++DP
Sbjct: 394 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCICSVDPPGC 453
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 454 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 513
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 514 LSSNLCSLKCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTYAEAQLRID----- 568
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
S+N D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 569 -SANM-------------NDDITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 614
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 615 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 674
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 824
L++ T ++ +SL++A E Y L +L ATR M A YFCSG D
Sbjct: 675 AARSRNLEIKTDTAKSLAESLDRA-ESPTFPY-LNTLLRILATRCMMQAVYFCSG---MD 729
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 730 NDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTY 771
>gi|225438438|ref|XP_002276939.1| PREDICTED: exosome complex exonuclease RRP44 isoform 2 [Vitis
vinifera]
gi|296082564|emb|CBI21569.3| unnamed protein product [Vitis vinifera]
Length = 937
Score = 290 bits (741), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 183/521 (35%), Positives = 274/521 (52%), Gaps = 56/521 (10%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 407
RP+GRVV II+R+ W +Y GS + + + ++
Sbjct: 338 RPSGRVVGIIKRN--------------WHSY-CGSLEPMPMPAGNGGIAHALFVS---KD 379
Query: 408 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 467
+ PK+ + + L + + KR+ +VA +D W+ S +P H + G G+
Sbjct: 380 RRIPKIRIQTRQLGNLLDKRI----------IVA--VDSWDCLSRYPSGHYVRTIGEIGD 427
Query: 468 VEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLS--RKDLRNFCIFTIDPSTA 525
+ + +L EN I FS + L+CLP +PW V E+L + R DLR+ C+F++DP
Sbjct: 428 RDTESEVVLIENDINSRPFSLQVLACLPPLPWSVSSEDLANPCRLDLRHVCVFSVDPPGC 487
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
D+DDAL L +G VGVHIADV+ FV PGT LD EA R TSVY+++R+I MLP
Sbjct: 488 KDIDDALHCTTLPNGNFEVGVHIADVTNFVHPGTPLDDEAAQRGTSVYLVERRIDMLPKP 547
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
L+E++ SL V+RLAFS+ W++ +++ +++I+SC LSY AQ +D +
Sbjct: 548 LTEDICSLRSDVERLAFSVIWEMTPQAEIISTKYTKSIIKSCAALSYIEAQARMDDSRLM 607
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
+ + ++++ ++K+++ +R GAL L +++ F D E
Sbjct: 608 DP-------------------LTMDLRNMNALAKVMRLRRIERGALTLASAEVKFQIDTE 648
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + + N + EEFML AN + AE I + FP +LLRRHP+P L
Sbjct: 649 THDPLDIGMYQIREANQMVEEFMLAANVSVAEKILKHFPLCSLLRRHPSPTREMLEPLLR 708
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 824
+ GL LD SSS SL+ A + DD ++ ATR M A YFCSGD
Sbjct: 709 TAAAVGLNLDVSSSKALADSLDHA---VGDDPYFNKLIRILATRCMTQAVYFCSGDLS-P 764
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 865
++ HY LA P+YTHFTSP+RRY D++VHR L A+L KL
Sbjct: 765 PEFHHYGLAAPLYTHFTSPIRRYADVIVHRLLAASLGLYKL 805
Score = 48.5 bits (114), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 40/83 (48%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R I++ H M + L +G + RVN +N EAY E + +++I G NRA
Sbjct: 214 RKVIYSEHKPMSEITSGLHRGIYHQGKLRVNRYNPFEAYVGSESIGDEIIIYGRGNMNRA 273
Query: 216 VEGDFVLIKVDRLSLWAKMKGFS 238
+GD V +++ W + K S
Sbjct: 274 FDGDVVAVELLPQDQWQEEKSLS 296
>gi|449280298|gb|EMC87625.1| Exosome complex exonuclease RRP44, partial [Columba livia]
Length = 896
Score = 290 bits (741), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 191/533 (35%), Positives = 278/533 (52%), Gaps = 73/533 (13%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 407
RPTGRVV II+R+ R G L S+ K+ R L TP
Sbjct: 264 RPTGRVVGIIKRNWR--PFCGML-----------SKSQIKEARRHL---------FTPAD 301
Query: 408 PKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 466
+ P++ R+E A T+E + + ID W S +P H + G G
Sbjct: 302 RRIPRI-------------RIETRQADTLEGQRIIVAIDGWPRNSRYPNGHFVKNLGSAG 348
Query: 467 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 526
+ E + +L E+ + FS LS LP +PW + ++++ R+DLR+ C+ ++DP T
Sbjct: 349 DKETETEVLLLEHDVPHQPFSQSVLSFLPQMPWSITEQDMKYREDLRHLCVCSVDPPGCT 408
Query: 527 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 586
D+DDAL + +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P LL
Sbjct: 409 DIDDALHCREVENGNIEVGVHIADVSHFIRPGNALDEESAKRGTTVYLCEKRIDMVPELL 468
Query: 587 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 646
S + SL VDRLAFS W++N +++ +++I S L+Y AQ ID
Sbjct: 469 SSNLCSLRSNVDRLAFSCIWEMNHKAEILKTRFTKSIINSKASLTYAEAQMRID------ 522
Query: 647 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EY 705
S T+ + D+ S++ L +++KILK +R +GAL L + + F D E
Sbjct: 523 -SATMND------------DITISLRGLNKLAKILKKRRIDNGALVLSSPEVRFHMDSET 569
Query: 706 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPN------MRKL 759
P D ++ N + EEFMLLAN + A+ I FP+ ALLR+HPAP + K
Sbjct: 570 HDPIDLQTKELKETNSMVEEFMLLANVSVAQKIYDEFPEFALLRKHPAPPPSNYDILVKA 629
Query: 760 REFEA------FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLA 813
+ +A F L++ T S+ +SL++A E Y L +L ATR M A
Sbjct: 630 AKSQAIIPDFLFLPPQNLEIKTDSAKALAESLDKA-ESPAFPY-LNTLLRIMATRCMMQA 687
Query: 814 SYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
YFCSG D D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 688 VYFCSG---MDNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADSTY 737
>gi|109120929|ref|XP_001084036.1| PREDICTED: exosome complex exonuclease RRP44-like isoform 5 [Macaca
mulatta]
Length = 928
Score = 290 bits (741), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 189/522 (36%), Positives = 270/522 (51%), Gaps = 63/522 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 406
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 310 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 346
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDAT-IEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ P++ R+E A+ +E + ID W S +P H + G
Sbjct: 347 DKRIPRI-------------RIETRQASALEGRRIIVAIDGWPRNSRYPNGHFVRNLGDV 393
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
GE E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ CI ++DP
Sbjct: 394 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCICSVDPPGC 453
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 454 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 513
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 514 LSSNLCSLKCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTYAEAQLRID----- 568
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
S+N D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 569 -SANM-------------NDDITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 614
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 615 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 674
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 824
L++ T ++ +SL++A E Y L +L ATR M A YFCSG D
Sbjct: 675 AARSRNLEIKTDTAKSLAESLDRA-ESPTFPY-LNTLLRILATRCMMQAVYFCSG---MD 729
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 730 NDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAVGADSTY 771
>gi|355754731|gb|EHH58632.1| Exosome complex exonuclease RRP44 [Macaca fascicularis]
Length = 958
Score = 290 bits (741), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 189/522 (36%), Positives = 270/522 (51%), Gaps = 63/522 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 406
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 340 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 376
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDAT-IEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ P++ R+E A+ +E + ID W S +P H + G
Sbjct: 377 EKRIPRI-------------RIETRQASALEGRRIIVAIDGWPRNSRYPNGHFVRNLGDV 423
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
GE E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ CI ++DP
Sbjct: 424 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCICSVDPPGC 483
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 484 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 543
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 544 LSSNLCSLKCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTYAEAQLRID----- 598
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
S+N D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 599 -SANM-------------NDDITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 644
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 645 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 704
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 824
L++ T ++ +SL++A E Y L +L ATR M A YFCSG D
Sbjct: 705 AARSRNLEIKTDTAKSLAESLDRA-ESPAFPY-LNTLLRILATRCMMQAVYFCSG---MD 759
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 760 NDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAVGADCTY 801
>gi|312375722|gb|EFR23034.1| hypothetical protein AND_13792 [Anopheles darlingi]
Length = 1171
Score = 290 bits (741), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 190/569 (33%), Positives = 291/569 (51%), Gaps = 48/569 (8%)
Query: 313 PSTSDSTEKVSSSQQNDGM--NAIERLSAMIS-SYPTKR-PTGRVVSIIERSPRRDGIVG 368
P+T S E+V+ + +G+ + ++ ++A+++ + PT R G VV ++E+ R +
Sbjct: 457 PATEASLEEVADASAPEGVVVDEVQPVTAVVAQAQPTARNGLGFVVRVLEKRHNRQCVGT 516
Query: 369 FLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSI---- 424
F + Q + Y P + P M VL DLP++
Sbjct: 517 FAPIGQG---------------------KKHYRMFIPRDKRIPAMRVLHHDLPNAFLDPM 555
Query: 425 -----KKRLEEGDATIE-----MELV-AARIDEWNEESPFPQAHVLHVFGRGGEVEPQIN 473
K GD I +E++ A+I +W ++ P +L G+ G++E +
Sbjct: 556 NAPNDGKEGGSGDGDIAAGTDLLEVIYQAQIVQWQDDVPI--GTILRPIGKCGQLEVENE 613
Query: 474 AILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALS 533
AIL E + + + L+ LP P+ +P+EEL R DLR CIFTIDP+TA DLDDALS
Sbjct: 614 AILVEYNLDVTPYPESLLAQLPPCPYTIPEEELAKRTDLRGECIFTIDPATARDLDDALS 673
Query: 534 IERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSL 593
+ L DG +GVHI+DV+YF+ G++LD + ++R+TS+YM+ MLP L SL
Sbjct: 674 CKLLPDGNYEIGVHISDVTYFLREGSSLDEQVKLRATSIYMVDGVHHMLPKQLCNSC-SL 732
Query: 594 NPGVDRLAFSIFWDLNSA-GDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLG 652
PG D+LAFS+ W + G ++D RT+I SC +LSYEHAQ ++D + E S
Sbjct: 733 LPGQDKLAFSVLWKIRPEDGQILDTRFERTIINSCAQLSYEHAQLMLD---NPEGSLEGD 789
Query: 653 EGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDS 711
E P + + + + + L ++ L+ +R G L++ K F D G P
Sbjct: 790 ESMPVIAHGYTANGLRDIVNRLQSIAVKLRKRRMDGGCLKINQPKLTFRLDPATGRPLAY 849
Query: 712 VLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGL 771
+ N L E+FMLLAN + AE I A+P +LLR H AP+ +++ + HG
Sbjct: 850 GVYQLRASNELIEDFMLLANVSVAEAIHAAYPAISLLRSHRAPSDNMMKKLVRNLAAHGY 909
Query: 772 QLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYA 831
SS +S+E + + + +L +PM A Y+CS D+ HYA
Sbjct: 910 TFSYDSSKAIRESMEAIAKAAEHPDAVSSVLSVLLAKPMTRALYYCSTFASSPEDFAHYA 969
Query: 832 LAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
LA P+YTHFTSP+RRY D +VHR L A+L
Sbjct: 970 LAIPLYTHFTSPIRRYADCLVHRVLAASL 998
>gi|343959206|dbj|BAK63458.1| exosome complex exonuclease RRP44 [Pan troglodytes]
Length = 630
Score = 290 bits (741), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 188/522 (36%), Positives = 270/522 (51%), Gaps = 63/522 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 406
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 12 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 48
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ P++ R+E A T+E + ID W S +P H + G
Sbjct: 49 DKRIPRI-------------RIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVRNLGDV 95
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
GE E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ CI ++DP
Sbjct: 96 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCICSVDPPGC 155
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 156 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 215
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ +
Sbjct: 216 LSSNLCSLKCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTYAEAQ------LRI 269
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
+S+N D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 270 DSANM-------------NDDITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 316
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 317 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 376
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 824
L++ T ++ +SL++A E Y L +L ATR M A YFCSG D
Sbjct: 377 AARSRNLEIKTDTAKSLAESLDRA-ESPTFPY-LNTLLRILATRCMMQAVYFCSG---MD 431
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 432 NDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTY 473
>gi|332216688|ref|XP_003257482.1| PREDICTED: exosome complex exonuclease RRP44 isoform 2 [Nomascus
leucogenys]
Length = 928
Score = 290 bits (741), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 189/522 (36%), Positives = 271/522 (51%), Gaps = 63/522 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 406
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 310 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 346
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ P++ R+E A T+E + ID W S +P H + G
Sbjct: 347 DKRIPRI-------------RIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVKNLGDV 393
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
GE E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ C+ ++DP
Sbjct: 394 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCVCSVDPPGC 453
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 454 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 513
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS + SL VDRLAFS W+++ +++ ++VI S L+Y AQ ID
Sbjct: 514 LSSNLCSLKCDVDRLAFSCIWEMSHNAEILKTKFTKSVINSKASLTYAEAQLRID----- 568
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
S+N D+ S+++L +++KILK +R GAL L + + F D E
Sbjct: 569 -SANM-------------NDDITTSLRALNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 614
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 615 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 674
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 824
L++ T ++ +SL+QA E Y L +L ATR M A YFCSG D
Sbjct: 675 AARSRNLEIKTDTAKSLAESLDQA-ESPTFPY-LNTLLRILATRCMMQAVYFCSG---MD 729
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 730 NDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTY 771
>gi|343961723|dbj|BAK62451.1| exosome complex exonuclease RRP44 [Pan troglodytes]
Length = 621
Score = 289 bits (740), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 188/522 (36%), Positives = 270/522 (51%), Gaps = 63/522 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 406
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 3 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 39
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ P++ R+E A T+E + ID W S +P H + G
Sbjct: 40 DKRIPRI-------------RIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVRNLGDV 86
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
GE E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ CI ++DP
Sbjct: 87 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCICSVDPPGC 146
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 147 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 206
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ +
Sbjct: 207 LSSNLCSLKCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTYAEAQ------LRI 260
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
+S+N D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 261 DSANM-------------NDDITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 307
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 308 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 367
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 824
L++ T ++ +SL++A E Y L +L ATR M A YFCSG D
Sbjct: 368 AARSRNLEIKTDTAKSLAESLDRA-ESPTFPY-LNTLLRILATRCMMQAVYFCSG---MD 422
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 423 NDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTY 464
>gi|405974096|gb|EKC38766.1| Exosome complex exonuclease RRP44 [Crassostrea gigas]
Length = 943
Score = 289 bits (740), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 195/590 (33%), Positives = 290/590 (49%), Gaps = 79/590 (13%)
Query: 347 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKN--RSSLSVPDREYIQLT 404
++PTG+VV II+R+ W Y G + K R + D+
Sbjct: 327 RQPTGKVVGIIKRN--------------WRQYCGMLQPSIIKQATRHLVVTADK------ 366
Query: 405 PTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGR 464
+ PK+ + + D + +R + ID W S +PQ H + G
Sbjct: 367 ----RIPKIRIETRQAADLMGQR------------IVVAIDNWPRTSRYPQGHFVRKLGN 410
Query: 465 GGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPST 524
G+ E + +L E+ I +GFS L+CLP +PWE+ +E++ R+D R+ I ++DP
Sbjct: 411 VGDKETENEVLLLEHDIPHAGFSEAVLNCLPTLPWEITKEDMERREDFRDLDICSVDPPG 470
Query: 525 ATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPV 584
TD+DDAL L +G VGVHIADVS+F+ PGTA+D EA+ R T+VY+ ++I M+P
Sbjct: 471 CTDIDDALHCRDLPNGNLEVGVHIADVSHFIRPGTAIDKEAERRGTTVYLTDKRIDMVPE 530
Query: 585 LLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFD 644
LLS + SL V+R AFS+ W++ + ++V+ ++VI+S L+Y AQ ID
Sbjct: 531 LLSSNLCSLRSNVERFAFSVIWEITNNAEIVEARYAKSVIKSKAALTYAEAQMRIDDPSM 590
Query: 645 VESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD- 703
++ V +S+++L ++KILK KR GAL L +++ F D
Sbjct: 591 TDA-------------------VTKSLRNLNRLAKILKKKRMEKGALTLASNEVRFHIDS 631
Query: 704 EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFE 763
E P D + N + EEFMLLAN + A+ + FPD + LRRHP P
Sbjct: 632 ETHDPIDVETKQIRETNSMVEEFMLLANVSTAQKTLQEFPDCSCLRRHPCPPPSNFDPLI 691
Query: 764 AFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKD 823
G ++D SS SLE+A L DD +L TR M A YFCSG
Sbjct: 692 KAAQSKGFRIDVSSGKALADSLERA--VLPDDPYFNVMLRIMTTRCMAQAVYFCSGMLP- 748
Query: 824 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY------WKHRRMLPKNN 877
+++ HY LA +YTHFTSP+RRY D++VHR L + A+ Y +K + + N
Sbjct: 749 PSEYIHYGLAAEIYTHFTSPIRRYSDIIVHRLLAVCIGADASYPELTDKYKTQAVCNNLN 808
Query: 878 HREGV---RGR----FLTGIFY-----DKDAAESLEGREALSVAALKYGV 915
+R + GR T IF+ D + + AL V KYG+
Sbjct: 809 YRHKMAQYAGRASVNLHTHIFFKNRHVDNEGYVLFVRKNALQVLIPKYGL 858
>gi|313216487|emb|CBY37789.1| unnamed protein product [Oikopleura dioica]
Length = 907
Score = 289 bits (740), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 186/516 (36%), Positives = 266/516 (51%), Gaps = 64/516 (12%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTG +V II+R+ W NY G + +
Sbjct: 312 PTGEIVGIIKRA--------------WRNYCG-------------VIEGSTRVLFLAAQR 344
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK+ + + + I +RL +VA ID W+ +S +P H++ V G G+
Sbjct: 345 QIPKIRIETRQVDRLIGQRL----------VVA--IDGWSRKSRYPNGHLVKVLGNVGDK 392
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDL 528
+ + +L E+ + FSP+ LSCLP W + +EEL R DLR + I ++DP TD+
Sbjct: 393 KTENEVLLLEHDVKHDPFSPKVLSCLPDKNWTITEEELAKRVDLREYDIASVDPPGCTDI 452
Query: 529 DDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSE 588
DDAL ++L +G VGVHIADVS+F+ PGTALD EA R TSVY+ +I M+P+LLS
Sbjct: 453 DDALHCKKLPNGNYEVGVHIADVSHFIKPGTALDEEAAQRGTSVYLADNRIDMVPILLSS 512
Query: 589 EVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESS 648
+ SL G +RLAFS W+L+ +V ++VI+S +YE AQ ID K +S
Sbjct: 513 NLCSLRGGEERLAFSTIWELDDNAQIVSVKFHKSVIKSKSAFTYEEAQIRIDDKSKTDS- 571
Query: 649 NTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGT 707
+ S++ L ++K LK +R DGAL L + + F D E
Sbjct: 572 ------------------LTESLRGLNYLAKKLKAQRLEDGALTLASVEVRFHLDSETAD 613
Query: 708 PYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCS 767
P D ++ N + EEFMLLAN + AE I FP SA+LRRHP P +
Sbjct: 614 PIDLYTKELKETNSMVEEFMLLANCSVAEHIRTEFPQSAVLRRHPKPPVSNFDPLVRAAK 673
Query: 768 KHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDW 827
L+ +SS + SL A + D ++ +L +TR M A YFC+G F+ D W
Sbjct: 674 AKDFHLNVNSSRELADSLNLAVD--PSDPMVNTVLRVMSTRSMMQAVYFCTG-FESDC-W 729
Query: 828 GHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE 863
HY LA P+YTHFTSP+RRY D++VHR L A++ A+
Sbjct: 730 -HYGLAAPIYTHFTSPIRRYADIMVHRALAASIGAD 764
>gi|355701030|gb|EHH29051.1| Exosome complex exonuclease RRP44 [Macaca mulatta]
Length = 958
Score = 289 bits (740), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 188/522 (36%), Positives = 270/522 (51%), Gaps = 63/522 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 406
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 340 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 376
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDAT-IEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ P++ R+E A+ +E + ID W S +P H + G
Sbjct: 377 EKRIPRI-------------RIETRQASALEGRRIIVAIDGWPRNSRYPNGHFVRNLGDV 423
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
GE E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ C+ ++DP
Sbjct: 424 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCVCSVDPPGC 483
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 484 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 543
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 544 LSSNLCSLKCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTYAEAQLRID----- 598
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
S+N D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 599 -SANM-------------NDDITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 644
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 645 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 704
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 824
L++ T ++ +SL++A E Y L +L ATR M A YFCSG D
Sbjct: 705 AARSRNLEIKTDTAKSLAESLDRA-ESPTFPY-LNTLLRILATRCMMQAVYFCSG---MD 759
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 760 NDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAVGADCTY 801
>gi|330805012|ref|XP_003290482.1| hypothetical protein DICPUDRAFT_155003 [Dictyostelium purpureum]
gi|325079410|gb|EGC33012.1| hypothetical protein DICPUDRAFT_155003 [Dictyostelium purpureum]
Length = 1035
Score = 289 bits (740), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 188/575 (32%), Positives = 287/575 (49%), Gaps = 61/575 (10%)
Query: 289 DSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKR 348
D+ + A + +++ E + + PST E Q +D + AM+++ K+
Sbjct: 279 DNINRAVDGDIVAIELFEESKWNAPSTIIMLESEGVEQDDDSIAK----DAMVAN---KK 331
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTGRVV II+R+ W Y G + S + ++ P
Sbjct: 332 PTGRVVGIIKRN--------------WKPYCGAVEFKGDGSNQSTGL---HFLFFIPVDK 374
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK+ + + + + + +R + ID+W++ S +P H + G G+
Sbjct: 375 RIPKIRIKSRQVSNLLGRR------------IVVAIDQWDKNSKYPSGHFVKDLGPLGDK 422
Query: 469 EPQINAILYENAICCSGFSPESLSCLPC--VPWEVPQEELLSRKDLRNFCIFTIDPSTAT 526
E + +L + I F + CLP + V +++ RKDLR CIF++DP T
Sbjct: 423 ETESQVLLLQFDIPHHPFGASVMKCLPSPDIMDRVTPADMVGRKDLRKECIFSVDPPGCT 482
Query: 527 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 586
D+DDAL I+ LS G+ VGVHIADVS+FV GTA+D EA RSTSVY++ R+I MLP L
Sbjct: 483 DIDDALHIKELSKGVFEVGVHIADVSHFVQEGTAIDEEAASRSTSVYLVDRRIDMLPGEL 542
Query: 587 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 646
S + SL VDR AFS W + + G++++ +++IRSC L+YE AQ ID K
Sbjct: 543 SGNLCSLMCNVDRYAFSCIWKITADGEIINVEYTKSIIRSCASLTYEQAQIKIDDK---- 598
Query: 647 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEY- 705
S N + +++ L ++K+L+ +RF GAL L + + F +E+
Sbjct: 599 SQN---------------DQIATNLRHLNNLAKVLRKQRFDRGALMLASPQVKFKTEEHG 643
Query: 706 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAF 765
G P D + + N + EEFMLLAN A+ I + FP A+LRRHP P
Sbjct: 644 GDPSDVEIYQLRETNAMIEEFMLLANIWVAKKIYKHFPGCAMLRRHPTPKKSSFELLTKL 703
Query: 766 CSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDT 825
G T++S + +SL+ ++ D + TR M A YF SG +
Sbjct: 704 IENKGFTFSTNTSKELSESLDSC--NIEGDPYFNTLCRIMTTRCMSPAVYFSSGSVPYE- 760
Query: 826 DWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
++ HY LA +YTHFTSP+RRYPD++VHR L A+
Sbjct: 761 EFNHYGLASEIYTHFTSPIRRYPDIIVHRLLATAI 795
Score = 44.7 bits (104), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%)
Query: 146 DDNPSHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVL 205
+D+ E++ F H + + E ++ G + ++R + N EA + D+L
Sbjct: 215 EDHIKDTDESKKFQFLEHKPLSVLTEEIKNGKLVQGVFRTSITNYREATVSDRANERDIL 274
Query: 206 ITGIAAQNRAVEGDFVLIKVDRLSLW 231
I GI NRAV+GD V I++ S W
Sbjct: 275 IQGIDNINRAVDGDIVAIELFEESKW 300
>gi|356516247|ref|XP_003526807.1| PREDICTED: exosome complex exonuclease RRP44-like [Glycine max]
Length = 934
Score = 289 bits (739), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 189/556 (33%), Positives = 287/556 (51%), Gaps = 66/556 (11%)
Query: 313 PSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNV 372
P+++D + S Q + E+L+A+ S RP GR+V II+R+
Sbjct: 313 PNSADDAPRAVSQQGSS-----EQLNAVPS-----RPCGRIVGIIKRN------------ 350
Query: 373 NQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGD 432
W +Y GS + + + ++ + PK+ + + L + + KR+
Sbjct: 351 --WHSY-CGSLEPMPMPAGNGGIAHALFVS---KDRRTPKIRIQTRQLENLLDKRI---- 400
Query: 433 ATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLS 492
+VA +D W+ +S +P H + G+ + + + +L EN I FS + L+
Sbjct: 401 ------IVA--VDSWDRQSRYPSGHYVRTIGKIDDRDTETEVVLIENDINTRPFSSQVLA 452
Query: 493 CLPCVPWEVPQEELLS--RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIAD 550
CLP +PW V E+L + RKDL + C+F++DP D+DDAL L +G VGVHIAD
Sbjct: 453 CLPPLPWVVSSEDLSNPIRKDLCHLCVFSVDPPGCKDIDDALHCHSLPNGNFEVGVHIAD 512
Query: 551 VSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNS 610
V+ FV PGT LD EA R TSVY+++R+I MLP L+E++ SL V+RLAFS+ W++
Sbjct: 513 VTNFVHPGTPLDDEAAQRGTSVYLVERRIDMLPKPLTEDICSLRSDVERLAFSVIWEMTP 572
Query: 611 AGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRS 670
D++ ++VI+S LSY AQ +D ++ +
Sbjct: 573 EADIISTRYTKSVIKSSAALSYVEAQARMDDSRLMDP-------------------ITAD 613
Query: 671 IKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLL 729
++++ ++K ++ +R GAL L +++ F D E P D + + N + EEFML
Sbjct: 614 LRNMNSLAKKMRLRRIERGALTLASAEVKFQIDTETHDPLDIGMYQIREANQMVEEFMLA 673
Query: 730 ANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAR 789
AN + A+ I +FP +LLRRHP P L + GL LD SSS SL+ A
Sbjct: 674 ANVSVAQQILNSFPLVSLLRRHPTPTREMLEPLLQTAAAVGLHLDVSSSKALADSLDHA- 732
Query: 790 EKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPD 849
+ DD ++ ATR M A YFCSGD ++ HY LA P+YTHFTSP+RRY D
Sbjct: 733 --VGDDPYFNKLIRILATRCMTQAVYFCSGDLS-PPEYHHYGLAAPLYTHFTSPIRRYAD 789
Query: 850 LVVHRTLNAALEAEKL 865
++VHR L A+L KL
Sbjct: 790 VIVHRLLAASLGISKL 805
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 39/83 (46%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R I++ H M + L +G + RVN +N EAY E + +++I G + NRA
Sbjct: 214 RKVIYSEHKPMSEITSGLHRGIYHQGKLRVNRYNPFEAYVGSESIGDEIVIYGRSIMNRA 273
Query: 216 VEGDFVLIKVDRLSLWAKMKGFS 238
+GD V ++ W + S
Sbjct: 274 FDGDIVAAELLPQDQWQGVSSLS 296
>gi|123413558|ref|XP_001304301.1| RNB-like protein [Trichomonas vaginalis G3]
gi|121885743|gb|EAX91371.1| RNB-like protein [Trichomonas vaginalis G3]
Length = 863
Score = 289 bits (739), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 183/523 (34%), Positives = 273/523 (52%), Gaps = 67/523 (12%)
Query: 349 PTGRVVSIIERSPRRDGIVGFL-----NVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQL 403
PTG+VVSI+ R R I G + N W +S L VP +E +
Sbjct: 274 PTGKVVSILSRKSR--VICGTVLPPKVQTNDW--------------QSLLVVPQQENL-- 315
Query: 404 TPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG 463
PK+ + + + + I R V ID W S +P H + G
Sbjct: 316 -------PKIRIRSRQVQELIGMR------------VHVAIDSWAINSKYPSGHYISTIG 356
Query: 464 RGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPS 523
+ G ++ + IL N I FS L+CLP ++ EE+ R DLR+ C+ +IDP
Sbjct: 357 QAGNLQAESEVILMTNEIPHDAFSDAVLNCLPPKDFQPTPEEVKRRMDLRDRCVCSIDPP 416
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
TD+DDAL + + + +GVHIADVS+FV GTA+D+EA+ R T+VY+++++I MLP
Sbjct: 417 GCTDIDDALHYKDIDEETCEIGVHIADVSFFVREGTAIDLEARDRGTTVYLVEKRIHMLP 476
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLN-SAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
LLSE++ S+ G++RLAFS+ +N + +D G+++I+S LSY AQ+I++ +
Sbjct: 477 SLLSEDLCSIRGGIERLAFSVVAIMNKKTAETIDVKFGKSIIKSRAALSYGRAQEIVEDQ 536
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
D S++ + I+ L +SKI+ KR DGAL L + + F
Sbjct: 537 ND-------------------QSELAKGIRGLLALSKIMNKKRMDDGALTLSSPQLHFTL 577
Query: 703 D-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLRE 761
D E P L ++N L EEFML AN A+ I F SA+LRRH +P +
Sbjct: 578 DSETAEPLSGELYQHLEVNSLVEEFMLYANIEVAKKIYETFKQSAMLRRHESPIAARFDF 637
Query: 762 FEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDF 821
+ G+QL+ ++ ++L+ EK+KD L +I+ TR MQ A YF +G
Sbjct: 638 LNRALKRFGVQLNPDTNKSLVETLDGVGEKVKD---LDNIVRIMTTRCMQFAKYFAAGT- 693
Query: 822 KDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
+ ++ HY LA P+YTHFTSP+RRY DL+VHR L AA+ +K
Sbjct: 694 QSYENFRHYGLAMPIYTHFTSPIRRYADLIVHRQLAAAIGYDK 736
>gi|426236547|ref|XP_004012229.1| PREDICTED: exosome complex exonuclease RRP44 isoform 2 [Ovis aries]
Length = 847
Score = 289 bits (739), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 182/523 (34%), Positives = 268/523 (51%), Gaps = 65/523 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 406
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 229 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 265
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ P++ R+E A T+E + +D W S +P H + G
Sbjct: 266 DKRIPRI-------------RIETRQASTLEGRRIIVAVDGWPRNSRYPNGHFVKNLGEV 312
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
G+ E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ C+ ++DP
Sbjct: 313 GDKETETEVLLLEHDVPHQAFSQAVLSFLPKMPWSITEKDMKNREDLRHLCVCSVDPPGC 372
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 373 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 432
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS + SL VDRLAFS W++ +++ ++VI S L+Y AQ ID
Sbjct: 433 LSSNLCSLRSNVDRLAFSCIWEMTHNAEILKTRFTKSVINSKASLTYAEAQMRID----- 487
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
S + + ++ S++ L +++KILK +R GAL L + + F D E
Sbjct: 488 --SAAMND------------NITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 533
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 534 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 593
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKD 823
L++ T ++ SL+QA + + + L+ ATR M A YFCSG
Sbjct: 594 AAKSKNLEIKTDTAKALADSLDQADSPI---FPYLNTLLRILATRCMMQAVYFCSG---M 647
Query: 824 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
D D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 648 DNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTY 690
>gi|170035482|ref|XP_001845598.1| mitotic control protein dis3 [Culex quinquefasciatus]
gi|167877510|gb|EDS40893.1| mitotic control protein dis3 [Culex quinquefasciatus]
Length = 970
Score = 289 bits (739), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 171/436 (39%), Positives = 243/436 (55%), Gaps = 25/436 (5%)
Query: 433 ATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLS 492
AT+ + + ID W S +P H + G GE + + IL E+ + FS E S
Sbjct: 382 ATLISQRIVVAIDYWPRHSKYPIGHFVRALGGIGEKDTENEVILLEHDVPHGSFSEEIKS 441
Query: 493 CLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVS 552
LP +PW V EE R DLR+ I ++DP TD+DDAL RL++G VGVHIADV+
Sbjct: 442 QLPKLPWTVEPEEYKKRVDLRDITICSVDPPGCTDIDDALHARRLANGNIEVGVHIADVT 501
Query: 553 YFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAG 612
+F+ PGT LD EA +R+T+VY++ ++I M+P +LS + SL G +RLAFS W+L+
Sbjct: 502 HFIKPGTPLDKEASLRATTVYLVDKRIDMVPDVLSSNLCSLRGGEERLAFSCIWELDDEA 561
Query: 613 DVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIK 672
++ + ++VI+S L+Y+ AQ IID D +N + +S++
Sbjct: 562 NIQNTRFHKSVIQSKAALTYQEAQLIID---DPSQTN----------------ETAQSLR 602
Query: 673 SLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLAN 731
L ++KILK +R +GAL L + + F D E P D V D N + EEFMLLAN
Sbjct: 603 LLNTLAKILKRRRIDNGALVLASPEIRFNIDSETHDPIDVVAKKLMDTNSMVEEFMLLAN 662
Query: 732 KTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREK 791
+ AE I + FP+ ALLRRHP P + S G ++ T S Q SL++A
Sbjct: 663 VSVAEKIHQEFPEYALLRRHPCPPEANFEPLKKAASYQGFEIITDSGKQLATSLDEA--- 719
Query: 792 LKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDL 850
+K D F+ L+ TR M A YF SG + ++ HY LA P+YTHFTSP+RRY D+
Sbjct: 720 VKPDNPYFNTLLRILTTRCMMQAVYFISGTIQ-QAEYFHYGLASPIYTHFTSPIRRYADV 778
Query: 851 VVHRTLNAALEAEKLY 866
+VHR L A + A+ Y
Sbjct: 779 IVHRLLAACIGADATY 794
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 152 QSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAA 211
Q E+R IF H + ++E ++KGD + + + N LE ++E + VLI G
Sbjct: 217 QDESRI-IFPAHLTASQIHEGIKKGDFLQGSFFASRDNFLEGNVRVEAYEEPVLIQGRLN 275
Query: 212 QNRAVEGDFVLIKVDRLSLW 231
NRAV+GD V +++ S W
Sbjct: 276 LNRAVDGDVVAVRMLPKSEW 295
>gi|327267843|ref|XP_003218708.1| PREDICTED: exosome complex exonuclease RRP44-like [Anolis
carolinensis]
Length = 968
Score = 288 bits (738), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 184/521 (35%), Positives = 268/521 (51%), Gaps = 61/521 (11%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 406
RPTG+VV II+R+ W Y G S+ K++R L TP
Sbjct: 352 RPTGKVVGIIKRN--------------WRPYCGMLSKSQIKESRRHL---------FTPA 388
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 466
+ P++ + + +T+E + + ID W S +P H + G G
Sbjct: 389 DRRIPRIRIETRQ------------SSTLEGQRIIVAIDGWPRSSRYPHGHFVKNLGAAG 436
Query: 467 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 526
+ E + +L E+ + FS LS LP +PW + +++ R+DLR+ C+ ++DP T
Sbjct: 437 DKETETEVLLLEHDVPHQAFSQAVLSFLPQMPWSITDKDMKFREDLRHLCVCSVDPPGCT 496
Query: 527 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 586
D+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P LL
Sbjct: 497 DIDDALHCRDLENGNLEVGVHIADVSHFIRPGNALDQESAKRGTTVYLCEKRIDMVPELL 556
Query: 587 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 646
S + SL VDRLAFS W++N+ +V+ ++VI S L+Y AQ ID
Sbjct: 557 SSNLCSLRSNVDRLAFSCIWEMNNNAEVLKTRFTKSVINSKASLTYAEAQMRID------ 610
Query: 647 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EY 705
S ++ + D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 611 -SGSMND------------DITLSLRGLNKLAKILKKRRIDKGALTLSSPEVRFHMDSET 657
Query: 706 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAF 765
P D ++ N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 658 HDPIDLQTKELKETNSMVEEFMLLANISVAQKIYDEFSEHALLRKHPAPPPSNYDILVKA 717
Query: 766 CSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDT 825
++ T S+ SL++A E Y L +L ATR M A YFCSG D
Sbjct: 718 AKSKDFEIKTDSAKALADSLDRA-ESPSFPY-LNTLLRILATRCMMQAVYFCSG---MDN 772
Query: 826 DWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 773 DFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADSTY 813
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKI--EGVQTDVLITGIAAQNRAV 216
IF+ H + + + ++ G + +R N N LEA + +G Q +V++ G+ NRAV
Sbjct: 238 IFSEHLPLSKLQQGIKSGLYLQGTFRANRDNYLEATVWVHGDGDQREVIVQGLRNLNRAV 297
Query: 217 EGDFVLIKVDRLSLWA 232
D V +++ WA
Sbjct: 298 HEDIVAVELLSKDAWA 313
>gi|426236545|ref|XP_004012228.1| PREDICTED: exosome complex exonuclease RRP44 isoform 1 [Ovis aries]
Length = 958
Score = 288 bits (738), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 182/523 (34%), Positives = 268/523 (51%), Gaps = 65/523 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 406
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 340 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 376
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ P++ R+E A T+E + +D W S +P H + G
Sbjct: 377 DKRIPRI-------------RIETRQASTLEGRRIIVAVDGWPRNSRYPNGHFVKNLGEV 423
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
G+ E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ C+ ++DP
Sbjct: 424 GDKETETEVLLLEHDVPHQAFSQAVLSFLPKMPWSITEKDMKNREDLRHLCVCSVDPPGC 483
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 484 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 543
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS + SL VDRLAFS W++ +++ ++VI S L+Y AQ ID
Sbjct: 544 LSSNLCSLRSNVDRLAFSCIWEMTHNAEILKTRFTKSVINSKASLTYAEAQMRID----- 598
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
S + + ++ S++ L +++KILK +R GAL L + + F D E
Sbjct: 599 --SAAMND------------NITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 644
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 645 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 704
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKD 823
L++ T ++ SL+QA + + + L+ ATR M A YFCSG
Sbjct: 705 AAKSKNLEIKTDTAKALADSLDQADSPI---FPYLNTLLRILATRCMMQAVYFCSG---M 758
Query: 824 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
D D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 759 DNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTY 801
>gi|195389268|ref|XP_002053299.1| GJ23805 [Drosophila virilis]
gi|194151385|gb|EDW66819.1| GJ23805 [Drosophila virilis]
Length = 979
Score = 288 bits (738), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 222/771 (28%), Positives = 344/771 (44%), Gaps = 142/771 (18%)
Query: 107 SGSTQSQLLLATDLCGS--------IISRSCPEPIANDSSCWAYTNKDDNPSHQSEARC- 157
SG T ++++L TD G+ I+ S + + + +K + ++E +
Sbjct: 170 SGRTATRVVLLTDDAGNRAKAEAEDILVASAADYVKSLEDFPLLVDKLSQKTFENEKQAL 229
Query: 158 KIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVE 217
+ PH SM+ + E L + ++ + N LE +E + +LI G + NRAV+
Sbjct: 230 PQYPPHLSMKELLEGLRYKKLLQGSFQASRENYLEGNVNVESYEKGILIQGRESLNRAVD 289
Query: 218 GDFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCT 277
GD V +++ S W+ P+E
Sbjct: 290 GDIVAVELLPESEWSA----------------PSE------------------------I 309
Query: 278 LLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERL 337
+L EK ++ DD PS E+ QQ A ER
Sbjct: 310 VLEEKNVYADDV-----------------------PSEERVEEEKEMLQQVQTAPAAERT 346
Query: 338 SAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPD 397
PTGR+V I+ R +W Y G + + D
Sbjct: 347 -----------PTGRIVGIVRR--------------KWRQYCGILQPSL--------IED 373
Query: 398 REYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAH 457
P K P++ + + A ++ + + ID W S +P H
Sbjct: 374 TTRHIFVPADRKIPRIRIETRQA------------AKLQNQRIIVTIDSWPRNSRYPHGH 421
Query: 458 VLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCI 517
+ G G + + IL E+ + FS E LS LP +PW + +E+ R DLR+ I
Sbjct: 422 FVRSLGPLGNMATENEVILLEHDVPHCKFSEEVLSFLPKMPWTITEEDYAKRVDLRDLYI 481
Query: 518 FTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 577
++DP TD+DDAL L +G VGVHIADVS+F+ PG ALD EA R T+VY++ +
Sbjct: 482 CSVDPPGCTDIDDALHCRELPNGNLEVGVHIADVSHFIRPGNALDKEAAARGTTVYLVGK 541
Query: 578 KIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQD 637
+I M+P LLS + SL GV+R AFS W++++ +V+ + ++VI+S ++YE AQ
Sbjct: 542 RIDMVPELLSSNLCSLVGGVERFAFSCVWEVDNQANVLSKRFHKSVIKSKRAMTYEEAQA 601
Query: 638 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 697
+ID S GE + +S++ L ++KILK +R +GAL L + +
Sbjct: 602 LID------DSTETGE-------------IAKSLRHLNRLAKILKKRRMDNGALVLASPE 642
Query: 698 PVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNM 756
F D E P + D N + EEFMLLAN T A+ IA F + A+LRRHP P
Sbjct: 643 IRFQVDSETHEPLEVEAKQMRDTNSMVEEFMLLANITVAQHIAAEFTECAVLRRHPKPPP 702
Query: 757 RKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASY 815
G ++ ++ + SL++ +K D F+ +I TR M A Y
Sbjct: 703 TNFDPLVKAARYQGFEVAINTGLELAHSLDKC---VKADNPYFNTMIRILTTRCMMQAVY 759
Query: 816 FCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
F SG + + ++ HY LA +YTHFTSP+RRY D++VHR L A++ A+ Y
Sbjct: 760 FISGSLQKE-EFFHYGLAADIYTHFTSPIRRYSDIMVHRLLAASIGADSTY 809
>gi|395745419|ref|XP_003778263.1| PREDICTED: LOW QUALITY PROTEIN: exosome complex exonuclease RRP44
[Pongo abelii]
Length = 958
Score = 288 bits (738), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 190/522 (36%), Positives = 269/522 (51%), Gaps = 63/522 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 406
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 340 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 376
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ P++ R+E A T+E + ID W S +P H + G
Sbjct: 377 DKRIPRI-------------RIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVRNLGDV 423
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
GE E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ CI ++DP
Sbjct: 424 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCICSVDPPGC 483
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 484 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 543
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 544 LSSNLCSLKCDVDRLAFSCXWEMNHNAEILKTKFTKSVINSKASLTYAEAQLRID----- 598
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
S+N D+ S++ L +++KILK R GAL L + + F D E
Sbjct: 599 -SANM-------------NDDITTSLRGLNKLAKILKKGRIEKGALTLSSPEVRFHMDSE 644
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 645 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 704
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 824
L++ T ++ +SL++A E Y L +L ATR M A YFCSG D
Sbjct: 705 AARSRNLEIKTDTAKSLAESLDRA-ESPTFPY-LNTLLRILATRCMMQAVYFCSG---MD 759
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 760 NDFYHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTY 801
>gi|326664018|ref|XP_001336850.2| PREDICTED: exosome complex exonuclease RRP44 [Danio rerio]
Length = 950
Score = 288 bits (737), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 187/533 (35%), Positives = 274/533 (51%), Gaps = 61/533 (11%)
Query: 336 RLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSV 395
+L ++ S +PTGRVV II+R+ R G L +Q K+A ++
Sbjct: 325 KLKSVASESSVLKPTGRVVGIIKRNWR--PFCGMLAQSQI--------KEATRH------ 368
Query: 396 PDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQ 455
TP + P++ + + I +R+ +VA ID W + S +P
Sbjct: 369 ------LFTPADRRIPRIRIETRQAATLIGQRI----------MVA--IDGWPKNSRYPN 410
Query: 456 AHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNF 515
H + G G+ E + +L E+ + FS LS LP +PW + +E+L R DLR+
Sbjct: 411 GHFVKNLGTAGDKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWGITEEDLKVRADLRHL 470
Query: 516 CIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYML 575
C+ ++DP TD+DDAL L +G VGVHIADVS+F+ PG ALD EA R T+VY+
Sbjct: 471 CVCSVDPPGCTDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQEAANRGTTVYLC 530
Query: 576 QRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHA 635
++I M+P LLS + SL V+RLAFS W++N +++ ++VI S L+Y A
Sbjct: 531 GKRIDMVPELLSSNLCSLRSNVERLAFSCIWEMNHKAEIIKTHFTKSVINSKASLTYAEA 590
Query: 636 QDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLEN 695
Q ID T+ + D+ +S++ L +++KILK +R GAL L +
Sbjct: 591 QMRID-------DTTMND------------DITKSLRGLNKLAKILKAQRIDKGALTLSS 631
Query: 696 SKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAP 754
+ F D E P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 632 PEVRFHIDSETHDPIDLQTKELMETNSMVEEFMLLANISVAQKIYDEFSECALLRKHPAP 691
Query: 755 NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLA 813
L++ T S+ SL A +++ F+ L+ ATR M A
Sbjct: 692 PPSNYDILIKAAKSRDLEIHTDSAKALADSLNNA---TIENFAYFNTLLRILATRCMMQA 748
Query: 814 SYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
YFCSG D+D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 749 VYFCSG---MDSDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAINADSTY 798
>gi|330843802|ref|XP_003293834.1| hypothetical protein DICPUDRAFT_158751 [Dictyostelium purpureum]
gi|325075801|gb|EGC29647.1| hypothetical protein DICPUDRAFT_158751 [Dictyostelium purpureum]
Length = 1294
Score = 288 bits (737), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 178/531 (33%), Positives = 274/531 (51%), Gaps = 52/531 (9%)
Query: 341 ISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREY 400
+S+ K PTG+V+ + +R+ W +Y G +KN +S + +
Sbjct: 409 VSNQDLKIPTGKVIGVFQRN--------------WRDYVGT----VEKNTNSFT----NF 446
Query: 401 IQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLH 460
+ + P + P + V K+ I KRL RID W+ S P H +
Sbjct: 447 VMVVPFDWRIPIIKVPTKNPAQYIGKRL------------IVRIDNWDLNSKSPMGHYVS 494
Query: 461 VFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC----VPWEVPQEELLSRKDLRNFC 516
G G +E ++ A++ E+ I + L CLP PW++P+EE R+ L +
Sbjct: 495 TIGESGSLETELQALMVEHDISLKPWPTSILKCLPESSEEAPWQIPKEEFKYRRVLNDHH 554
Query: 517 IFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQ 576
+IDP + D+DDA+SI SD I VGVHIADVS+FV G+ALDIEA+ R T++Y+
Sbjct: 555 TMSIDPLGSKDIDDAISIGYPSDDIIEVGVHIADVSFFVKEGSALDIEARRRGTTIYLPD 614
Query: 577 RKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHA 635
R+ MLP +LSE+V SL G R A S W ++++ W GRT+I S +L Y+ A
Sbjct: 615 RRFDMLPAVLSEDVCSLRGGFPRCAMSCIWQFKRGTCEIINTWFGRTIIHSSGELHYQLA 674
Query: 636 QDIIDGKF--------DVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFT 687
QDII+G DV + +++ + SD+ + + +L + ++LK R
Sbjct: 675 QDIINGVVVDGKDKDTDVTNGGKNAGYRNRVFNGLKISDIKKDLINLRTIFRLLKKNRED 734
Query: 688 DGALRLENSKPVFLF--DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDS 745
+GAL LE+ + F F D G P VL +++ L E+M+LAN + A I +FP S
Sbjct: 735 NGALDLESIEVRFQFNQDAPGKPEKIVLKNDLEIHSLVAEYMILANSSVASKIYSSFPSS 794
Query: 746 ALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINY 805
+LLRRHP PN + + G L+T ++ + +SL +A++ +D+ + IL
Sbjct: 795 SLLRRHPKPNQINFESIKPLFNLCGFDLNTKTNKELAESLSEAKD--SNDHFINQILKLK 852
Query: 806 ATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTL 856
+ A YF +G + ++ HY LA YTHFTSP+RRY D++VHR L
Sbjct: 853 TVNIVSEAVYFSTGSI-NVNEFYHYGLALDKYTHFTSPIRRYSDIIVHRQL 902
>gi|224071355|ref|XP_002303419.1| predicted protein [Populus trichocarpa]
gi|222840851|gb|EEE78398.1| predicted protein [Populus trichocarpa]
Length = 935
Score = 288 bits (737), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 183/523 (34%), Positives = 272/523 (52%), Gaps = 56/523 (10%)
Query: 346 TKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTP 405
+ RP+G VV II+R+ W +Y G S V Y
Sbjct: 336 SSRPSGLVVGIIKRN--------------WHSYCGSLEPMPMPAGSGGLV----YALFVS 377
Query: 406 THPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ PK+ + + L + + KR+ +VA +D W+ +S P H + G+
Sbjct: 378 KDRRIPKIRIQTRQLDNLLDKRI----------IVA--VDSWDRQSRHPSGHYIRSIGQI 425
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEEL--LSRKDLRNFCIFTIDPS 523
G+ + + +L EN I FS + L+CLP +PW V ++L +R DLR+ C+F++DP
Sbjct: 426 GDRDTETELVLIENDIDARPFSAQVLACLPPLPWSVSSKDLNESNRVDLRHLCVFSVDPP 485
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
D+DDAL L G VGVHIADV+ FV PGT LD EA R TSVY+++R+I MLP
Sbjct: 486 GCKDIDDALHCTMLPTGNFEVGVHIADVTNFVHPGTPLDDEATQRGTSVYLVERRIDMLP 545
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKF 643
L+E++ SL V+RLAFS+ W++ +++ ++VI+S LSY AQ +D
Sbjct: 546 KPLTEDICSLRADVERLAFSVIWEMTPEAEIISTKYTKSVIKSRAALSYVEAQARMDDSR 605
Query: 644 DVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD 703
V+ V + ++++ ++KI++ +R GAL L +++ F D
Sbjct: 606 LVDP-------------------VTKDLRNMNALAKIMRQRRIHRGALTLASAEVKFQID 646
Query: 704 -EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
E P D + + N + EEFML AN + AE I + FP+ +LLRRHP P L
Sbjct: 647 TETHDPLDIGMYQIREANQMVEEFMLAANVSVAEKILKEFPECSLLRRHPTPTKEMLGPL 706
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
+ GL LD +SS SL++A + DD ++ ATR M A YFCSG+
Sbjct: 707 LRTAAAVGLNLDVTSSKALADSLDRA---VGDDPYFNKLIRIMATRCMTQAVYFCSGELS 763
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 865
++ HY LA P+YTHFTSP+RRY D++VHR L A++ KL
Sbjct: 764 -PPEFLHYGLAAPLYTHFTSPIRRYSDVIVHRLLAASIGIYKL 805
Score = 47.4 bits (111), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R ++ H M + L KG + RVN +N EAY E + +++I G NRA
Sbjct: 215 RKVVYPEHKPMSEITSGLTKGIYHQGKLRVNRYNPFEAYVGSESIGDEIVIYGRGNMNRA 274
Query: 216 VEGDFVLIKVDRLSLWAKMKGFS 238
+GD V +++ W + K S
Sbjct: 275 FDGDVVAVELLPQDQWHEEKSLS 297
>gi|149730276|ref|XP_001495267.1| PREDICTED: exosome complex exonuclease RRP44 isoform 1 [Equus
caballus]
Length = 958
Score = 288 bits (737), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 183/523 (34%), Positives = 268/523 (51%), Gaps = 65/523 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 406
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 340 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 376
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ P++ R+E A T+E + +D W S +P H + G
Sbjct: 377 DKRIPRI-------------RIETRQASTLEGRRIIVAVDGWPRNSRYPNGHFVKNLGEV 423
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
G+ E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ C+ ++DP
Sbjct: 424 GDKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCVCSVDPPGC 483
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 484 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 543
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS + SL VDRLAFS W++N +++ ++ I S L+Y AQ ID
Sbjct: 544 LSSNLCSLRCNVDRLAFSCIWEMNHNAEILKTRFTKSAINSKASLTYAEAQMRID----- 598
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
S T+ + D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 599 --SATMND------------DITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 644
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 645 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 704
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKD 823
L++ T ++ SL++A + + L+ ATR M A YFCSG
Sbjct: 705 AAKSKNLEIKTDTAKSLADSLDRADSP---SFPYLNTLLRILATRCMMQAVYFCSG---M 758
Query: 824 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
D D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 759 DNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTY 801
>gi|452987594|gb|EME87349.1| hypothetical protein MYCFIDRAFT_148028 [Pseudocercospora fijiensis
CIRAD86]
Length = 992
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 228/738 (30%), Positives = 338/738 (45%), Gaps = 134/738 (18%)
Query: 143 TNKDDNPSHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQT 202
+++D + ++A ++ + SM A+ ++ G + + V+ +N LE +
Sbjct: 239 SSRDQRAARDAKAE-NLYPEYISMSAMLTGVKNGTLHQGNFSVSPYNYLEGSVHVPAFDR 297
Query: 203 DVLITGIAAQNRAVEGDFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICK 262
++I G NRAV GD V+++V LP E
Sbjct: 298 PLIIQGRENSNRAVSGDVVVLEV-----------------------LPRE---------- 324
Query: 263 GKSKVDVSYEYSNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKV 322
++ + ++ E+ I+ +D++ +E +S E +
Sbjct: 325 -------QWKAPSSKVIEEEDINKNDNAENE----------------------DESAEPI 355
Query: 323 SSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGS 382
+ Q+ + R + S +PT +VV II+R+ W Y G
Sbjct: 356 VTEQERKALLEEARRAQGKVSEGRPQPTAKVVGIIKRN--------------WRQYVGHI 401
Query: 383 RKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAA 442
KD+ K+ + S ++ + L P + PK+ V + D + KR V
Sbjct: 402 DKDSVKSGAKQSRA-QQTVFLIPMDKRIPKIRVRTRQAGDLLGKR------------VLV 448
Query: 443 RIDEWNEESPFPQAHVLHVFG----RGGEVEPQINAILYENAICCSGFSPESLSCLPCV- 497
ID W+ ES +P H + G +G E E A+L E + F L CLP
Sbjct: 449 TIDSWDRESRYPVGHFIRSLGELETKGAETE----ALLLEWDVQYRPFPKSVLDCLPAEG 504
Query: 498 -PWEVPQEELLS------RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIAD 550
W+VPQ+ LS RKDLR+ I +IDP D+DDAL L +G VGVHIAD
Sbjct: 505 HDWKVPQD--LSHPGWKGRKDLRDLLICSIDPPGCVDIDDALHARVLPNGNFEVGVHIAD 562
Query: 551 VSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNS 610
VS+FV P A+D EA +R T+VY++ ++I MLP+LL ++ SL P V+R AFS+ W+LN+
Sbjct: 563 VSHFVKPNNAMDKEASLRGTTVYLVDKRIDMLPMLLGTDLCSLKPYVERYAFSVIWELNA 622
Query: 611 AGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRS 670
D+++ ++VIRS SYE AQ ID + + D+ +
Sbjct: 623 NADIINASFTKSVIRSREAFSYERAQLRIDDR-------------------SQQDDLTKG 663
Query: 671 IKSLYEVSKILKDKRFTDGALRLENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLL 729
++ L +SK L+ KR GAL L + + V E P D D N L EEFMLL
Sbjct: 664 MRHLMMLSKKLRAKRMAAGALNLASPEVRVETESETSDPVDVKTKQLLDTNQLVEEFMLL 723
Query: 730 ANKTAAEVIARAFPDSALLRRHPAPNMRKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQA 788
AN + A AFP +ALLRRH AP E K G++L T SS +L+
Sbjct: 724 ANISVAGKNYEAFPQTALLRRHAAPPKNNFEELSNQLKVKKGMELRTDSSKALADTLDTC 783
Query: 789 REKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRY 847
+ D F+ L+ ATR M A YFCSG + ++ HY LA +YTHFTSP+RRY
Sbjct: 784 ---VDSDNPFFNTLVRILATRCMMSAEYFCSGT-QAYPEFRHYGLASEIYTHFTSPIRRY 839
Query: 848 PDLVVHRTLNAALEAEKL 865
DL HR L AA+E E L
Sbjct: 840 ADLEAHRQLAAAIEYEPL 857
>gi|426236549|ref|XP_004012230.1| PREDICTED: exosome complex exonuclease RRP44 isoform 3 [Ovis aries]
Length = 929
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 182/523 (34%), Positives = 268/523 (51%), Gaps = 65/523 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 406
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 311 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 347
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ P++ R+E A T+E + +D W S +P H + G
Sbjct: 348 DKRIPRI-------------RIETRQASTLEGRRIIVAVDGWPRNSRYPNGHFVKNLGEV 394
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
G+ E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ C+ ++DP
Sbjct: 395 GDKETETEVLLLEHDVPHQAFSQAVLSFLPKMPWSITEKDMKNREDLRHLCVCSVDPPGC 454
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 455 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 514
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS + SL VDRLAFS W++ +++ ++VI S L+Y AQ ID
Sbjct: 515 LSSNLCSLRSNVDRLAFSCIWEMTHNAEILKTRFTKSVINSKASLTYAEAQMRID----- 569
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
S + + ++ S++ L +++KILK +R GAL L + + F D E
Sbjct: 570 --SAAMND------------NITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 615
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 616 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 675
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKD 823
L++ T ++ SL+QA + + + L+ ATR M A YFCSG
Sbjct: 676 AAKSKNLEIKTDTAKALADSLDQADSPI---FPYLNTLLRILATRCMMQAVYFCSG---M 729
Query: 824 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
D D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 730 DNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTY 772
>gi|158285738|ref|XP_308437.4| AGAP007395-PA [Anopheles gambiae str. PEST]
gi|157020138|gb|EAA04469.4| AGAP007395-PA [Anopheles gambiae str. PEST]
Length = 1209
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 178/533 (33%), Positives = 269/533 (50%), Gaps = 46/533 (8%)
Query: 346 TKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTP 405
T+ G VV+I+E+ R + FL + + + Y P
Sbjct: 546 TQNSVGFVVAILEKRHNRQCVGKFL---------------------AAAPGKKHYRVFMP 584
Query: 406 THPKYPKMVVLVKDLPDSI-----------------KKRLEEGDATIEMELVAARIDEWN 448
+ P + V +D P+++ +K + GD + L A I EW
Sbjct: 585 RDMRIPPVRVFKQDWPNALLSTNIAKLKDDKEEKEDRKVPQTGDVDVTDVLYQAEIIEWQ 644
Query: 449 EESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLS 508
+E P +L G+ G +E + +IL E+ + + + L+ LP VP+ +PQEEL
Sbjct: 645 DEVPI--GTILKSIGKCGVLEVENESILVEHNLDVTPYGEAILAQLPAVPYCIPQEELER 702
Query: 509 RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVR 568
R+DLR CIFTIDP+TA DLDDALS ++L +G ++GVHI+DV+YF+ + LD ++R
Sbjct: 703 REDLRGECIFTIDPATARDLDDALSCKQLENGNYQIGVHISDVTYFLRESSPLDELVKLR 762
Query: 569 STSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCC 628
+TS+YM+ MLP L SL PG D+LAFS+FW++ G V+ RTVI SC
Sbjct: 763 ATSIYMVDTVYHMLPKQLCNTC-SLLPGEDKLAFSVFWEMQPDGTVLSTRFARTVINSCS 821
Query: 629 KLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTD 688
+LSYEHAQ ++D S + +P++ + + + + +L ++ L+ +R D
Sbjct: 822 QLSYEHAQLMLDNP----SCEVEEDQFPEIMHGYNAKQLCKIVNTLQSIAVQLRQRRMDD 877
Query: 689 GALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSAL 747
G L++ K F D G P + + N + E+FMLLAN + A I +AFP+ +L
Sbjct: 878 GCLKINQPKLTFRLDPATGRPIEYGVYKVRPSNEMIEDFMLLANTSVANAIYKAFPEISL 937
Query: 748 LRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYAT 807
LR H P ++ S HG L +S + +E ++ +L
Sbjct: 938 LRAHSPPAENMMKNLVRTLSLHGHALSYASPKDIRECMETIITTSENPDATRSVLSVLLA 997
Query: 808 RPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
+PM A Y+CS + HYALA P+YTHFTSP+RRY D +VHR L AAL
Sbjct: 998 KPMIRAQYYCSLYATTPEHFMHYALAIPMYTHFTSPIRRYADCLVHRVLAAAL 1050
>gi|345788644|ref|XP_542610.3| PREDICTED: exosome complex exonuclease RRP44 isoform 2 [Canis lupus
familiaris]
Length = 958
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 187/536 (34%), Positives = 272/536 (50%), Gaps = 65/536 (12%)
Query: 335 ERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSL 393
ER+ S +PTGRVV II+R+ W Y G S+ D K++R L
Sbjct: 327 ERILKTAVSEKMLKPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL 372
Query: 394 SVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDAT-IEMELVAARIDEWNEESP 452
TP + P++ R+E A+ +E + ID W S
Sbjct: 373 ---------FTPADRRIPRI-------------RIETRQASALEGRRIIVAIDGWPRNSR 410
Query: 453 FPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDL 512
+P H + G GE E + +L E+ + FS LS LP +PW + ++++ +R+DL
Sbjct: 411 YPNGHFVKNLGEVGEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDL 470
Query: 513 RNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSV 572
R+ C+ ++DP TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+V
Sbjct: 471 RHLCVCSVDPPGCTDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTV 530
Query: 573 YMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSY 632
Y+ +++I M+P LLS + SL VDRLAFS W++N +++ ++VI S L+Y
Sbjct: 531 YLCEKRIDMVPELLSSNLCSLRCNVDRLAFSCIWEMNHDAEILKVRFTKSVINSKASLTY 590
Query: 633 EHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALR 692
AQ ID S + + D+ S++ L +++KILK +R GAL
Sbjct: 591 AEAQMRID-------SAAMND------------DITTSLRGLNKLAKILKKRRIEKGALT 631
Query: 693 LENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH 751
L + + F D E P D + N + EEFMLLAN + A+ I F + ALLR+H
Sbjct: 632 LSSPEVRFHMDSETHDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKH 691
Query: 752 PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPM 810
PAP L++ T ++ SL++A + + L+ ATR M
Sbjct: 692 PAPPPSNYEILVKAAKSKNLEIKTDTAKSLADSLDRADSP---TFPYLNTLLRILATRCM 748
Query: 811 QLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
A YFCSG D D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 749 MQAVYFCSG---MDNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTY 801
>gi|321478602|gb|EFX89559.1| hypothetical protein DAPPUDRAFT_310536 [Daphnia pulex]
Length = 956
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 203/629 (32%), Positives = 298/629 (47%), Gaps = 90/629 (14%)
Query: 315 TSDSTEKVSSSQQNDGMNAIERLSAMI---SSYPTKRPTGRVVSIIERSPRRDGIVGFLN 371
TS S + ++ D + IE+ ++ + ++PTG++V II R
Sbjct: 301 TSPSGIVLEDQEEQDPGDEIEKEEKLLIDSTKSKDRQPTGKIVGIIRR------------ 348
Query: 372 VNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEG 431
+W Y G +P+ P K PK+ R+E
Sbjct: 349 --KWRQYCGILLPSV--------LPEGTRHLFVPAERKIPKI-------------RIETR 385
Query: 432 DA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPES 490
A T+ + + ID W S +P H + G G+ + + +L E+ + F
Sbjct: 386 QAVTLSSQKIIVAIDSWPRTSRYPLGHFVRALGNIGDKDTENEVLLLEHDVPHHSFPETV 445
Query: 491 LSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIAD 550
L+CLP +PW + +EE+ R+DLR+ I ++DP TD+DDAL LS + +GVHIAD
Sbjct: 446 LACLPSMPWMITEEEVNRREDLRHLDICSVDPPGCTDIDDALHFRELSPNLYEIGVHIAD 505
Query: 551 VSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNS 610
VS+FV P TALD EA R T+VY++ R+I M+P LLS + SL P +RLAFS+ W + +
Sbjct: 506 VSHFVRPDTALDKEAANRGTTVYLVDRRIDMVPELLSSNLCSLRPDQERLAFSVIWQVTA 565
Query: 611 AGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRS 670
++ ++VIRS +Y AQ ID + +++ +S
Sbjct: 566 DAEIQKTRFTKSVIRSRRAFTYAEAQCNID-------------------DSLQQNELAKS 606
Query: 671 IKSLYEVSKILKDKRFTDGALRLENSKPVFLFD---EYGTPYDSVLSGREDLNFLFEEFM 727
++ L +++KILK R GAL+L S P F+ E P D + D N + EEFM
Sbjct: 607 LRGLNKLAKILKKNRMDKGALQL--SSPEIRFEVSTETNDPIDVISKPMLDTNSMVEEFM 664
Query: 728 LLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQ 787
LLAN + A+ I + FP+ A+LRRHP P F G LD SS+ SL+
Sbjct: 665 LLANISVADHIFKHFPECAVLRRHPVPPASNFEPFLKAGKTQGFTLDVSSNKALAASLDA 724
Query: 788 AREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRR 846
A +K D V + ++ ATR M A YF SG D+ HY LA P+YTHFTSP+RR
Sbjct: 725 A---VKPDNVYMNTMLRILATRCMMQAVYFSSGTVA-QVDFYHYGLAAPIYTHFTSPIRR 780
Query: 847 YPDLVVHRTLNAALEAEKLY---------------WKHRRMLPKNNHREGVRGRFLTGIF 891
Y DL+VHR L A+ A+ Y +R + + R V T +F
Sbjct: 781 YADLLVHRLLAVAVGADVTYTELLNRKCAQQLCNNLNYRHKMSQYAQRSSV--ALHTHLF 838
Query: 892 Y-----DKDAAESLEGREALSVAALKYGV 915
+ D+DA + AL V KYG+
Sbjct: 839 FRHRVQDEDAYVLFVRQNALQVLIPKYGL 867
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 40/85 (47%)
Query: 153 SEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQ 212
+E R ++ H + + ++ G + ++ + N LE +EG +L+ G A+
Sbjct: 222 NENREPLYPEHLAPTRIMSGIKSGKLLQGVFHSSRENFLEGTVSVEGQDKSILLQGHASL 281
Query: 213 NRAVEGDFVLIKVDRLSLWAKMKGF 237
NRAV+GD V +++ W G
Sbjct: 282 NRAVDGDVVAVELLPEDKWTSPSGI 306
>gi|443718138|gb|ELU08883.1| hypothetical protein CAPTEDRAFT_225692 [Capitella teleta]
Length = 949
Score = 287 bits (735), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 199/589 (33%), Positives = 294/589 (49%), Gaps = 79/589 (13%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 407
RPTGRVV II+R+ W Y G +K S + +R P
Sbjct: 335 RPTGRVVGIIKRN--------------WRQYCGILQK------SVMQGANRHL--FIPAE 372
Query: 408 PKYPKMVVLVKDLPDSIKKRLEEGDAT-IEMELVAARIDEWNEESPFPQAHVLHVFGRGG 466
K P++ R+E A +E + + ID W + S +PQ H + G G
Sbjct: 373 RKIPRI-------------RIETRQAAELEGKRIIVVIDSWPKNSRYPQGHFVRCLGEIG 419
Query: 467 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 526
+ + + +L E+ + + FS L CLP +PW + +E+ R DLR+ I ++DP T
Sbjct: 420 DKDTENEVLLLEHDVPHASFSKAVLDCLPKLPWVITEEDEKQRTDLRHVDICSVDPPGCT 479
Query: 527 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 586
D+DDAL + +G VGVHIADVS+F+ PGTA+D EA R T+VY++ ++I M+P LL
Sbjct: 480 DIDDALHCITMENGNYEVGVHIADVSHFIRPGTAIDKEAANRGTTVYLIDKRIDMVPELL 539
Query: 587 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 646
S + SL G +R AFS W+LN ++ + +++I+S L+Y AQ ID V+
Sbjct: 540 SSNLCSLKGGEERFAFSCIWELNQNAEIQNVRFHKSIIKSRAALTYAEAQMRIDDPKKVD 599
Query: 647 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EY 705
+V +S++SL +++KILK +R GAL L + + F D E
Sbjct: 600 -------------------NVTQSLRSLNKLAKILKQRRIDQGALTLASPEIRFHIDSET 640
Query: 706 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAF 765
P D + N + EEFMLLAN + A+ I + FP+ A+LRRHP+P +
Sbjct: 641 HDPIDVQAKELRETNSMVEEFMLLANISVAKKITQEFPNCAILRRHPSPPLSNYDIIVDV 700
Query: 766 CSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDD 824
+ G +L+ S+ SLE+A + + F+ ++ TR M A YFCSG +
Sbjct: 701 AAAKGFKLNVSTGKALADSLERA---VVPGHPYFNTMLRILCTRCMMQAVYFCSG-LLAE 756
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE----KLYWKHRRMLPKNN--- 877
++ HY LA P+YTHFTSP+RRY DL+VHR L A A+ +L KH+ NN
Sbjct: 757 AEYEHYGLATPIYTHFTSPIRRYSDLMVHRLLAVAASADTSYPELLDKHKSQAICNNLNF 816
Query: 878 -HREG-VRGRFLTG----IFY-----DKDAAESLEGREALSVAALKYGV 915
HR GR G IF+ D+ + AL + KYG+
Sbjct: 817 RHRMAQYAGRASVGLHTQIFFKSRVSDEKGYVLFVRKNALQILIPKYGL 865
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 9/108 (8%)
Query: 143 TNKDDNPSHQSEARC----KIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIE 198
TN D S QS+ + ++F H + + + + G + ++ + N LEA ++
Sbjct: 203 TNLVDKLSTQSQVKTTQQSQLFPEHLPLSEIQKGIRSGKFLQGTFQASRENYLEANVNVQ 262
Query: 199 GVQTDVLITGIAAQNRAVEGDFVLIKVDRLSLWAKMKGFSNNSSIVED 246
+ V + G A NRA+ GD V I++ + W+ +S I+ED
Sbjct: 263 DQEQAVFLQGHAQLNRAISGDVVAIEMLPETEWS-----CPSSLIIED 305
>gi|345788646|ref|XP_003433103.1| PREDICTED: exosome complex exonuclease RRP44 isoform 1 [Canis lupus
familiaris]
Length = 928
Score = 287 bits (735), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 187/536 (34%), Positives = 272/536 (50%), Gaps = 65/536 (12%)
Query: 335 ERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSL 393
ER+ S +PTGRVV II+R+ W Y G S+ D K++R L
Sbjct: 297 ERILKTAVSEKMLKPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL 342
Query: 394 SVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDAT-IEMELVAARIDEWNEESP 452
TP + P++ R+E A+ +E + ID W S
Sbjct: 343 ---------FTPADRRIPRI-------------RIETRQASALEGRRIIVAIDGWPRNSR 380
Query: 453 FPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDL 512
+P H + G GE E + +L E+ + FS LS LP +PW + ++++ +R+DL
Sbjct: 381 YPNGHFVKNLGEVGEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDL 440
Query: 513 RNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSV 572
R+ C+ ++DP TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+V
Sbjct: 441 RHLCVCSVDPPGCTDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTV 500
Query: 573 YMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSY 632
Y+ +++I M+P LLS + SL VDRLAFS W++N +++ ++VI S L+Y
Sbjct: 501 YLCEKRIDMVPELLSSNLCSLRCNVDRLAFSCIWEMNHDAEILKVRFTKSVINSKASLTY 560
Query: 633 EHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALR 692
AQ ID S + + D+ S++ L +++KILK +R GAL
Sbjct: 561 AEAQMRID-------SAAMND------------DITTSLRGLNKLAKILKKRRIEKGALT 601
Query: 693 LENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH 751
L + + F D E P D + N + EEFMLLAN + A+ I F + ALLR+H
Sbjct: 602 LSSPEVRFHMDSETHDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKH 661
Query: 752 PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPM 810
PAP L++ T ++ SL++A + + L+ ATR M
Sbjct: 662 PAPPPSNYEILVKAAKSKNLEIKTDTAKSLADSLDRADSP---TFPYLNTLLRILATRCM 718
Query: 811 QLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
A YFCSG D D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 719 MQAVYFCSG---MDNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTY 771
>gi|338715364|ref|XP_003363258.1| PREDICTED: exosome complex exonuclease RRP44 isoform 2 [Equus
caballus]
Length = 928
Score = 287 bits (735), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 183/523 (34%), Positives = 268/523 (51%), Gaps = 65/523 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 406
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 310 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 346
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ P++ R+E A T+E + +D W S +P H + G
Sbjct: 347 DKRIPRI-------------RIETRQASTLEGRRIIVAVDGWPRNSRYPNGHFVKNLGEV 393
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
G+ E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ C+ ++DP
Sbjct: 394 GDKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCVCSVDPPGC 453
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 454 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 513
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS + SL VDRLAFS W++N +++ ++ I S L+Y AQ ID
Sbjct: 514 LSSNLCSLRCNVDRLAFSCIWEMNHNAEILKTRFTKSAINSKASLTYAEAQMRID----- 568
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
S T+ + D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 569 --SATMND------------DITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 614
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 615 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 674
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKD 823
L++ T ++ SL++A + + L+ ATR M A YFCSG
Sbjct: 675 AAKSKNLEIKTDTAKSLADSLDRADSP---SFPYLNTLLRILATRCMMQAVYFCSG---M 728
Query: 824 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
D D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 729 DNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTY 771
>gi|348688889|gb|EGZ28703.1| hypothetical protein PHYSODRAFT_358582 [Phytophthora sojae]
Length = 1092
Score = 287 bits (735), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 196/545 (35%), Positives = 279/545 (51%), Gaps = 69/545 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG---SRKDAKKNRSSLSVPDREYIQLT 404
+P GRVV II+R+ W + G R A N S + +
Sbjct: 415 KPAGRVVGIIQRN--------------WRKFCGSLEPPRDGATLNASGSCL-------VV 453
Query: 405 PTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGR 464
P K PK+ + + + KR+ LVA ID W +S FP H + G
Sbjct: 454 PVDRKVPKIKIQTRQQETLMDKRV----------LVA--IDSWPADSKFPLGHYVRTLGV 501
Query: 465 GGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPST 524
G+ E + N +L E+ I C FS E + CLP W++ E R+DLR+ + +IDP
Sbjct: 502 IGDKETETNVLLIEHDIPCDQFSDEVMRCLPPEDWKITPENSTGRRDLRHLPVMSIDPPN 561
Query: 525 ATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPV 584
D+DDAL L +G +VGVHIADV++FV PG+ LD EA R TS Y++ R++ MLP
Sbjct: 562 CKDIDDALHARLLPNGNLQVGVHIADVTHFVAPGSPLDEEAADRGTSTYLVDRRLDMLPG 621
Query: 585 LLSEEVGSLNPGVDRLAFSIFWDLNSAGD----VVDRWIGRTVIRSCCKLSYEHAQDIID 640
LL+ ++ SL D AFS+ W+L GD V+D +++IRS LSY+ AQ+ +D
Sbjct: 622 LLTTKLCSLTDVEDHFAFSVLWELKLVGDNDVQVIDVSFCKSLIRSVASLSYQQAQEFLD 681
Query: 641 ----GKFDVESSNTLGEGWPQLYGQFEWSDVVRS-IKSLYEVSKILKDKRFTDGALRLEN 695
G + +N + + +FE ++ S IK+L +++ L+ KR GAL L +
Sbjct: 682 DPNAGGVYGQDTNPKKKKKGETEKEFERKQLLGSGIKTLNVIARRLRAKRIEAGALTLAS 741
Query: 696 SKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAP 754
+ F+ D E P D + D N L EEFMLLAN T A+ I R FP ++LRRHPAP
Sbjct: 742 PEVRFVLDTETQNPLDVQMYTLRDTNALVEEFMLLANITVAKKIVRHFPTFSMLRRHPAP 801
Query: 755 NMRKLREFEAFCSKH---GLQLDTSSSGQFHQSLEQA----------------REKLKDD 795
+ R+F+ CS+ G++L +S Q SL+ A + K +
Sbjct: 802 SK---RQFDLLCSQAKAVGVELHVDTSKQLQDSLDAADILAQEEADGKNKGKRKHGGKSN 858
Query: 796 YVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRT 855
+L TR M ASYF SG+ ++ HY LA P+YTHFTSP+RRY D+VVHR
Sbjct: 859 PYFNKLLRIMTTRCMMPASYFSSGEVA-PPEFHHYGLAAPIYTHFTSPIRRYADVVVHRL 917
Query: 856 LNAAL 860
L AA+
Sbjct: 918 LAAAI 922
>gi|19922976|ref|NP_612012.1| CG16940, isoform A [Drosophila melanogaster]
gi|16198179|gb|AAL13898.1| LD37985p [Drosophila melanogaster]
gi|23092668|gb|AAF47351.2| CG16940, isoform A [Drosophila melanogaster]
gi|220947244|gb|ACL86165.1| CG16940-PA [synthetic construct]
gi|220956788|gb|ACL90937.1| CG16940-PA [synthetic construct]
Length = 1032
Score = 287 bits (735), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 161/410 (39%), Positives = 230/410 (56%), Gaps = 9/410 (2%)
Query: 456 AHVLHVFGRGGEVEPQINAILYENAIC-CSGFSPESLSCLPCVPWEVPQEELLSRKDLRN 514
A ++ GR G ++ ++ AIL+ N + F + P + QE+L RKDLR
Sbjct: 494 AELIQPVGRVGNLDDELKAILFHNGLRDIKPFEQRFIDIYSQPPPPISQEDLRQRKDLRK 553
Query: 515 FCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYM 574
CIFTIDP TA DLDDA+SIE+L D +GVHI+DVS+F++ LD + RSTS+Y+
Sbjct: 554 MCIFTIDPMTARDLDDAVSIEKLGDNEYEIGVHISDVSHFLIEDNELDNIVKERSTSIYL 613
Query: 575 LQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW--IGRTVIRSCCKLSY 632
I MLP L SL PG D+ AFS+FW +N G ++ + RTVI SC + +Y
Sbjct: 614 ANEVIHMLPQSLCMRC-SLLPGQDKFAFSVFWRMNGKGVMLQKKPEFCRTVINSCSQFAY 672
Query: 633 EHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALR 692
EHAQ IID + + N +P + F D+ + L++++ ++ R +GAL
Sbjct: 673 EHAQKIIDNPNERFTEN----DFPTILNGFNPDDIRNRVLWLHDIASSIRKTRLDNGALT 728
Query: 693 LENSKPVFLFDEY-GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH 751
+ N+K FL D G P + + + N L EEFMLLAN+ A I +FPD A+LR H
Sbjct: 729 INNAKLRFLLDPITGEPLSFEVEKQREANRLIEEFMLLANQAVARFIHDSFPDIAVLRNH 788
Query: 752 PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQ 811
P P ++ L+ G +LD SSS +S+ + + + + L +PM
Sbjct: 789 PPPLIKSLKALREKLLALGFELDYSSSKALQESMVRLCNEAPNPVAMNACLSQLLMKPMA 848
Query: 812 LASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 861
A+YFCS + D HYAL+ P+YTHFTSP+RRYPD++VHR L AAL+
Sbjct: 849 RATYFCSEGKSEPADLWHYALSIPIYTHFTSPIRRYPDILVHRLLAAALK 898
>gi|417405419|gb|JAA49421.1| Putative exosomal 3'-5' exoribonuclease complex subunit [Desmodus
rotundus]
Length = 958
Score = 287 bits (735), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 184/523 (35%), Positives = 269/523 (51%), Gaps = 65/523 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 406
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 340 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 376
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDAT-IEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ P++ R+E A+ +E + ID W S +P H + G
Sbjct: 377 DRRIPRI-------------RIETRQASALEGRRIIVAIDGWPRNSRYPNGHFVKNLGDV 423
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
G+ E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ C+ ++DP
Sbjct: 424 GDKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEQDMKNREDLRHLCVCSVDPPGC 483
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 484 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 543
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 544 LSSNLCSLRCNVDRLAFSCIWEMNHNAEILKTRFTKSVINSKASLTYAEAQMRID----- 598
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
S T+ + D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 599 --SATMND------------DITISLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 644
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 645 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 704
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKD 823
L++ T ++ SL++A + + L+ ATR M A YFCSG
Sbjct: 705 AAKSKNLEIKTDTAKSLADSLDRADSP---TFPYLNTLLRILATRCMMQAVYFCSG---M 758
Query: 824 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
D D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 759 DNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTY 801
>gi|194864535|ref|XP_001970987.1| GG14701 [Drosophila erecta]
gi|190652770|gb|EDV50013.1| GG14701 [Drosophila erecta]
Length = 1083
Score = 287 bits (735), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 161/410 (39%), Positives = 230/410 (56%), Gaps = 9/410 (2%)
Query: 456 AHVLHVFGRGGEVEPQINAILYENAIC-CSGFSPESLSCLPCVPWEVPQEELLSRKDLRN 514
A ++ GR G ++ ++ AIL+ N + F P + Q++L RKDLR
Sbjct: 506 AELIQPVGRVGNLDDELKAILFHNGLRDIKPFEQRFNDMYSQTPPPISQDDLHQRKDLRK 565
Query: 515 FCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYM 574
CIFTIDP TA DLDDA+SIE+L + VGVHI+DVS+F+L LD + RSTS+Y+
Sbjct: 566 MCIFTIDPMTARDLDDAVSIEKLGENEYEVGVHISDVSHFLLEDNELDNIVKERSTSIYL 625
Query: 575 LQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW--IGRTVIRSCCKLSY 632
I MLP L SL PG D+ AFS+FW +N G ++ + RTVI SC + +Y
Sbjct: 626 ANEVIHMLPQSLCMRC-SLLPGEDKFAFSVFWRMNGEGAMLQKKPEFCRTVINSCSQFAY 684
Query: 633 EHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALR 692
EHAQ IID + + N +P + F D+ + + L++++ ++ RF +GAL
Sbjct: 685 EHAQKIIDNPNERFTEN----DFPTILNGFNTDDIKKRVLWLHDIASSIRKTRFDNGALT 740
Query: 693 LENSKPVFLFDEY-GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH 751
+ N+K F+ D G P + + + N L EEFMLLAN+ A I +FPD A+LR H
Sbjct: 741 INNAKLRFILDPISGEPLSYEVEKQREANRLIEEFMLLANQAVARFIHDSFPDIAVLRNH 800
Query: 752 PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQ 811
P P + L+ G +LD SSS +S+ + + + + L +PM
Sbjct: 801 PPPLTKSLKALREKLLALGFELDYSSSKALQESMVRLCNEAPNPVAMNACLSQLLMKPMA 860
Query: 812 LASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 861
A+YFCS + D HYAL+ P+YTHFTSP+RRYPD++VHR L AAL+
Sbjct: 861 RATYFCSEGKTEPADLWHYALSIPIYTHFTSPIRRYPDILVHRLLAAALK 910
>gi|157130204|ref|XP_001655640.1| mitotic control protein dis3 [Aedes aegypti]
gi|108871997|gb|EAT36222.1| AAEL011693-PA [Aedes aegypti]
Length = 970
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 172/434 (39%), Positives = 241/434 (55%), Gaps = 26/434 (5%)
Query: 435 IEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCL 494
I ++V A ID W S +P H + G GE + + IL E+ + FS E S L
Sbjct: 384 ITQKIVVA-IDYWPRHSKYPIGHFVRALGGIGEKDTENEVILLEHDVPHGSFSAEIQSQL 442
Query: 495 PCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYF 554
P +PW V EE R DLR+ I ++DP TD+DDAL RL +G VGVHIADV++F
Sbjct: 443 PKLPWTVDPEEYRKRVDLRDITICSVDPPGCTDIDDALHARRLDNGNIEVGVHIADVTHF 502
Query: 555 VLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDV 614
+ PGT LD EA +R+T+VY++ ++I M+P +LS + SL G +RLAFS W+L+ ++
Sbjct: 503 IKPGTPLDKEAGLRATTVYLVDKRIDMVPDVLSSNLCSLRGGEERLAFSCIWELDDGANI 562
Query: 615 VDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSL 674
++ ++VI+S L+Y+ AQ IID D +N + S++ L
Sbjct: 563 INTKFHKSVIKSKAALTYQEAQLIID---DPTQTNQTAQ----------------SLRLL 603
Query: 675 YEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKT 733
+++KILK +R +GAL L + + F D E P D V D N + EEFMLLAN +
Sbjct: 604 NKLAKILKRRRIDNGALVLASPEIRFNIDSETHDPIDVVAKKLLDTNSMVEEFMLLANVS 663
Query: 734 AAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLK 793
A I FP+ A+LRRHP P + S G Q+DTS SL+ A +K
Sbjct: 664 VAAKIQSEFPECAMLRRHPCPPDANFDPLKKAASYQGFQIDTSCGKNLATSLDLA---VK 720
Query: 794 DDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 852
D F+ L+ ATR M A YF SG + ++ HY LA P+YTHFTSP+RRY D++V
Sbjct: 721 PDNPYFNTLLRILATRCMMQAVYFISGTIQQQ-EYFHYGLASPIYTHFTSPIRRYADVIV 779
Query: 853 HRTLNAALEAEKLY 866
HR L A + A+ Y
Sbjct: 780 HRLLAACIGADATY 793
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 152 QSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAA 211
Q E++ IF H + ++E ++KG+ + + + N LE ++E ++ VLI G
Sbjct: 217 QDESKI-IFPAHLTTTQIHEGIKKGELLQGAFFASRDNFLEGNVRVESIEEPVLIQGRLN 275
Query: 212 QNRAVEGDFVLIKVDRLSLW 231
NRAV+GD V IK+ S W
Sbjct: 276 LNRAVDGDVVAIKLLPKSEW 295
>gi|291393084|ref|XP_002713032.1| PREDICTED: DIS3 mitotic control [Oryctolagus cuniculus]
Length = 957
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 185/523 (35%), Positives = 269/523 (51%), Gaps = 65/523 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 406
+PTGRVV II+R+ W Y G S+ K++R L TP
Sbjct: 340 KPTGRVVGIIKRN--------------WRPYCGMLSKSGIKESRRHL---------FTPA 376
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ P++ R+E A T+E + ID W S +P H + G
Sbjct: 377 DRRIPRI-------------RIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVKNLGDV 423
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
GE E + +L E+ + FS LS LP +PW + ++++ R DLR+ C+ ++DP
Sbjct: 424 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKHRVDLRHLCVCSVDPPGC 483
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 484 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 543
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 544 LSSNLCSLRCDVDRLAFSCIWEMNHNAEILRTKFTKSVINSKASLTYAEAQMRID----- 598
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
S T+ + D+ S++ L +++KILK +R +GAL L + + F D E
Sbjct: 599 --SATMND------------DITTSLRGLNKLAKILKRRRIENGALTLSSPEVRFHMDSE 644
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 645 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 704
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKD 823
L+++T ++ SL++A + + + L+ ATR M A YFCSG
Sbjct: 705 AAKSKNLEINTDTAKSLADSLDRAESPV---FPYLNTLLRILATRCMMQAVYFCSG---M 758
Query: 824 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
D D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 759 DNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTY 801
>gi|297836470|ref|XP_002886117.1| ribonuclease II family protein [Arabidopsis lyrata subsp. lyrata]
gi|297331957|gb|EFH62376.1| ribonuclease II family protein [Arabidopsis lyrata subsp. lyrata]
Length = 933
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 184/526 (34%), Positives = 275/526 (52%), Gaps = 66/526 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVP----DREYIQL 403
RP+GRVV +I R+ W +Y G + +S+P +
Sbjct: 336 RPSGRVVGVIRRN--------------WHSYCG--------SLEPMSLPAGSGGTAHALF 373
Query: 404 TPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG 463
+ PK+ + + L + ++M +V A +D W+ +S +P H + G
Sbjct: 374 VSKDRRIPKIRINTRQLQN-----------LLDMRIVVA-VDSWDRQSRYPSGHYVRPIG 421
Query: 464 RGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLS--RKDLRNFCIFTID 521
+ G+ E + +L EN + S FS + L+CLP +PW V E++ + R+DLR+ +F++D
Sbjct: 422 KIGDRETETEVVLIENDVDYSPFSSQVLACLPPLPWSVSPEDVSNPIRQDLRHLLVFSVD 481
Query: 522 PSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPM 581
P D+DDAL L +G +GVHIADV+ FV PGT LD EA R TSVY+++R+I M
Sbjct: 482 PPGCKDIDDALHCTSLPNGNFELGVHIADVTNFVHPGTPLDDEASKRGTSVYLVERRIDM 541
Query: 582 LPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDG 641
LP L+E++ SL V+RLAFS+ W+++ +++ +++I+S LSY AQ +D
Sbjct: 542 LPKPLTEDICSLRADVERLAFSVIWEMSPDAEIISTRFTKSIIKSSAALSYVEAQARMDD 601
Query: 642 KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFL 701
+S T ++++ ++KI++ +R GAL L +++ F
Sbjct: 602 SRLTDSLTT-------------------DLRNMNTLAKIMRQRRIDRGALTLASAEVKFQ 642
Query: 702 FD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLR 760
D E P D + + N + EEFML AN + A I + FP +LLRRHP P L
Sbjct: 643 IDTETHDPLDIGMYQIREANQMVEEFMLAANVSVAGQILKLFPSCSLLRRHPTPTREMLE 702
Query: 761 EFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSG 819
+ GL LD SSS SL++A +D Y F+ LI ATR M A YFCSG
Sbjct: 703 PLLRTAAAIGLTLDVSSSKALADSLDRAVG--EDPY--FNKLIRILATRCMTQAVYFCSG 758
Query: 820 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 865
D ++ HY LA P+YTHFTSP+RRY D+ VHR L A+L KL
Sbjct: 759 DLT-PPEYHHYGLAAPLYTHFTSPIRRYADVFVHRLLAASLGIYKL 803
Score = 47.8 bits (112), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 4/100 (4%)
Query: 143 TNKD----DNPSHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIE 198
TN+D D + R I+ H M + L +G + RVN N EAY E
Sbjct: 195 TNEDVTMEDADDSRPSKRKLIYQEHKPMSEITAGLHRGIYHQGKLRVNRFNPFEAYVGSE 254
Query: 199 GVQTDVLITGIAAQNRAVEGDFVLIKVDRLSLWAKMKGFS 238
+ +++I G + NRA +GD V +++ W + K S
Sbjct: 255 SIGEEIIIYGRSNMNRAFDGDIVAVELLPRDQWQEEKALS 294
>gi|51092105|gb|AAT94466.1| RE03681p [Drosophila melanogaster]
Length = 1044
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 161/410 (39%), Positives = 230/410 (56%), Gaps = 9/410 (2%)
Query: 456 AHVLHVFGRGGEVEPQINAILYENAIC-CSGFSPESLSCLPCVPWEVPQEELLSRKDLRN 514
A ++ GR G ++ ++ AIL+ N + F + P + QE+L RKDLR
Sbjct: 506 AELIQPVGRVGNLDDELKAILFHNGLRDIKPFEQRFIDIYSQPPPPISQEDLRQRKDLRK 565
Query: 515 FCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYM 574
CIFTIDP TA DLDDA+SIE+L D +GVHI+DVS+F++ LD + RSTS+Y+
Sbjct: 566 MCIFTIDPMTARDLDDAVSIEKLGDNEYEIGVHISDVSHFLIEDNELDNIVKERSTSIYL 625
Query: 575 LQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW--IGRTVIRSCCKLSY 632
I MLP L SL PG D+ AFS+FW +N G ++ + RTVI SC + +Y
Sbjct: 626 ANEVIHMLPQSLCMRC-SLLPGQDKFAFSVFWRMNGKGVMLQKKPEFCRTVINSCSQFAY 684
Query: 633 EHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALR 692
EHAQ IID + + N +P + F D+ + L++++ ++ R +GAL
Sbjct: 685 EHAQKIIDNPNERFTEN----DFPTILNGFNPDDIRNRVLWLHDIASSIRKTRLDNGALT 740
Query: 693 LENSKPVFLFDEY-GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH 751
+ N+K FL D G P + + + N L EEFMLLAN+ A I +FPD A+LR H
Sbjct: 741 INNAKLRFLLDPITGEPLSFEVEKQREANRLIEEFMLLANQAVARFIHDSFPDIAVLRNH 800
Query: 752 PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQ 811
P P ++ L+ G +LD SSS +S+ + + + + L +PM
Sbjct: 801 PPPLIKSLKALREKLLALGFELDYSSSKALQESMVRLCNEAPNPVAMNACLSQLLMKPMA 860
Query: 812 LASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 861
A+YFCS + D HYAL+ P+YTHFTSP+RRYPD++VHR L AAL+
Sbjct: 861 RATYFCSEGKSEPADLWHYALSIPIYTHFTSPIRRYPDILVHRLLAAALK 910
>gi|196006233|ref|XP_002112983.1| hypothetical protein TRIADDRAFT_25898 [Trichoplax adhaerens]
gi|190585024|gb|EDV25093.1| hypothetical protein TRIADDRAFT_25898 [Trichoplax adhaerens]
Length = 931
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 183/521 (35%), Positives = 262/521 (50%), Gaps = 61/521 (11%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKN--RSSLSVPDREYIQLTPT 406
P+G+VV II+R+ W Y G + N R DR
Sbjct: 334 PSGKVVGIIKRN--------------WRPYCGILLPNPNPNARRFLFRAADR-------- 371
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 466
+ P++ +L + + + +R + +D W + +P+ H + G G
Sbjct: 372 --RIPRIRILTRQSSNLLGQR------------IIVSVDAWQRKRRYPEGHFVRRLGPIG 417
Query: 467 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 526
+ E + +L E+ + FS L+ LP +PWE+ ++ R+DLR+ I +IDP T
Sbjct: 418 DKETESEVLLIEHNVPYQQFSQAVLNDLPTLPWEITDDDAKQREDLRHLTICSIDPPGCT 477
Query: 527 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 586
D+DDAL + L +G VGVHIADVS+F+ PGTA+DIEA R T+VY+ +++I M+P LL
Sbjct: 478 DIDDALHLTALENGNYEVGVHIADVSHFIRPGTAIDIEAANRGTTVYLAEKRIDMVPELL 537
Query: 587 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 646
S + SL VDR AFS W+L+ DV+ +++I+S +Y AQ IID K
Sbjct: 538 SSNLCSLRSNVDRFAFSCIWELSPDADVIAARFTKSIIKSQAAFTYAEAQLIIDDK---- 593
Query: 647 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EY 705
N D+ S++SL +++ L KR GAL L + + F D E
Sbjct: 594 QRN---------------DDIAISLRSLNVLAQALNKKRLDQGALSLASPEIRFQVDSET 638
Query: 706 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAF 765
P + V + N L EEFMLLAN T AE I FP ALLRRHP+P +
Sbjct: 639 HDPLELVKKELRETNSLVEEFMLLANITVAERIYEIFPQCALLRRHPSPPLSNFDILLKS 698
Query: 766 CSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDT 825
+ +QL S+ SL QA L+D+ +L TR M A YFCSG
Sbjct: 699 AAVKNIQLQVDSAKMLSTSLAQA--DLQDNPYFNTLLRILVTRCMMQAVYFCSGTLAYQ- 755
Query: 826 DWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
D+ HY LA P+YTHFTSP+RRY D++VHR L ++ A+K Y
Sbjct: 756 DYCHYGLATPIYTHFTSPIRRYSDIIVHRLLAISIGADKTY 796
Score = 40.8 bits (94), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/79 (21%), Positives = 39/79 (49%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
+FA + + + A++ G + ++ + N E + ++ G + D+ I + + NRA++
Sbjct: 220 VFAEYLPLSKIQSAIKAGRLIQGTFQSSRDNYKEGFVRVHGEEQDIFIKDLDSINRAIQD 279
Query: 219 DFVLIKVDRLSLWAKMKGF 237
D V +++ W K G
Sbjct: 280 DVVAVEMLPKQEWTKPSGL 298
>gi|24654592|ref|NP_728490.1| CG16940, isoform C [Drosophila melanogaster]
gi|23092667|gb|AAN11425.1| CG16940, isoform C [Drosophila melanogaster]
gi|206597330|gb|ACI15759.1| FI04463p [Drosophila melanogaster]
Length = 1044
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 161/410 (39%), Positives = 230/410 (56%), Gaps = 9/410 (2%)
Query: 456 AHVLHVFGRGGEVEPQINAILYENAIC-CSGFSPESLSCLPCVPWEVPQEELLSRKDLRN 514
A ++ GR G ++ ++ AIL+ N + F + P + QE+L RKDLR
Sbjct: 506 AELIQPVGRVGNLDDELKAILFHNGLRDIKPFEQRFIDIYSQPPPPISQEDLRQRKDLRK 565
Query: 515 FCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYM 574
CIFTIDP TA DLDDA+SIE+L D +GVHI+DVS+F++ LD + RSTS+Y+
Sbjct: 566 MCIFTIDPMTARDLDDAVSIEKLGDNEYEIGVHISDVSHFLIEDNELDNIVKERSTSIYL 625
Query: 575 LQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW--IGRTVIRSCCKLSY 632
I MLP L SL PG D+ AFS+FW +N G ++ + RTVI SC + +Y
Sbjct: 626 ANEVIHMLPQSLCMRC-SLLPGQDKFAFSVFWRMNGKGVMLQKKPEFCRTVINSCSQFAY 684
Query: 633 EHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALR 692
EHAQ IID + + N +P + F D+ + L++++ ++ R +GAL
Sbjct: 685 EHAQKIIDNPNERFTEN----DFPTILNGFNPDDIRNRVLWLHDIASSIRKTRLDNGALT 740
Query: 693 LENSKPVFLFDEY-GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH 751
+ N+K FL D G P + + + N L EEFMLLAN+ A I +FPD A+LR H
Sbjct: 741 INNAKLRFLLDPITGEPLSFEVEKQREANRLIEEFMLLANQAVARFIHDSFPDIAVLRNH 800
Query: 752 PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQ 811
P P ++ L+ G +LD SSS +S+ + + + + L +PM
Sbjct: 801 PPPLIKSLKALREKLLALGFELDYSSSKALQESMVRLCNEAPNPVAMNACLSQLLMKPMA 860
Query: 812 LASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 861
A+YFCS + D HYAL+ P+YTHFTSP+RRYPD++VHR L AAL+
Sbjct: 861 RATYFCSEGKSEPADLWHYALSIPIYTHFTSPIRRYPDILVHRLLAAALK 910
>gi|256072318|ref|XP_002572483.1| ribonuclease II-related [Schistosoma mansoni]
Length = 1769
Score = 287 bits (734), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 194/565 (34%), Positives = 288/565 (50%), Gaps = 54/565 (9%)
Query: 350 TGRVVSIIERSPRRDGIVGFLNVNQWFNY--KGGSRKDAKKN-----RSSLSVPDREYIQ 402
TG VV I++ R +G L + F K + D N R+ ++ +
Sbjct: 232 TGHVVGILQSLHSR-AFIGNLQIPSNFQTPKKVSPKGDQNNNQTEPMRTDPALSNWRNAV 290
Query: 403 LTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVF 462
L PT + P++ + + P+ K E T + RI EW S FP+ +L
Sbjct: 291 LIPTDTRLPRVFIPREACPEGFLKNPE----TYKNVRFIGRITEWLNSSMFPKGELLREL 346
Query: 463 GRGGEVEPQINAILYENAICCSGF--SPESLSCLPCVPWE-----------VPQEELLSR 509
Q + + +GF ++ P + E + +++ + R
Sbjct: 347 SCDSSTLIQDET---DRILVGAGFIWGVDAAFQFPDIVIESVRKSVDEVNAIREKDFIFR 403
Query: 510 KDLRNFCIFTIDPSTATDLDDALSIERLS-------------DGISRVGVHIADVSYFVL 556
KD R +C+FTIDPSTA DLDDAL I +L + VGVHIADVSYFV
Sbjct: 404 KDFRKYCVFTIDPSTARDLDDALHIRQLEPSEIEKLESSGYRNAFYEVGVHIADVSYFVK 463
Query: 557 PGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD 616
P + +D EA R+TS+Y++Q +PMLP LL EE SLNPG D+LAFS+ + + ++
Sbjct: 464 PNSLVDKEAASRATSIYLVQLCVPMLPRLLCEEQCSLNPGEDKLAFSVVFTVTEDAKILT 523
Query: 617 RWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 676
W GRT IRSCCKLSYE AQ ID D + S++ G+ ++ + D+ +++ L +
Sbjct: 524 TWFGRTFIRSCCKLSYEDAQGFIDHP-DRDWSSS---GFVKVDEPYTIMDICQNVLKLND 579
Query: 677 VSKILKDKRFTDGALRLENSKPVF-LFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 735
++ ++ RF GALRL+ K F L +E G P + N+L EE+ML ANK+ A
Sbjct: 580 LATKMRKSRFHSGALRLDQVKSTFSLNNETGLPLGIAPYISKQSNWLIEEWMLAANKSVA 639
Query: 736 EVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDD 795
E +A+ PDSA LRRHP+P++++L E + + G+ ++ S+G L + L+ +
Sbjct: 640 ERLAKYLPDSAFLRRHPSPSVKQLTEVSSSLNVAGININIDSAGSIQDKL--PLKTLEHE 697
Query: 796 YVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRT 855
L + + T+ M LA YFC G + HYAL +YTHFTSP+RRY D++VHR
Sbjct: 698 ARLL-VTVALLTKTMNLAVYFCLGLLPSELSPAHYALNMQLYTHFTSPIRRYADVIVHRQ 756
Query: 856 LNAAL-----EAEKLYWKHRRMLPK 875
L+A L + EK W PK
Sbjct: 757 LSAILAKEESDPEKADWYLSTAFPK 781
Score = 251 bits (640), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 174/531 (32%), Positives = 254/531 (47%), Gaps = 89/531 (16%)
Query: 441 AARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVP-- 498
RI +W E S +P + FG E+E IL E I F+PE L LP P
Sbjct: 1183 VCRITKWFENSKYPHGVIEQNFGNLNELEKATENILLEYGITDDQFTPEELQGLPTSPQE 1242
Query: 499 WEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPG 558
+++P+ E R+D R+ C+ TIDP A D DDAL I RL++G+ +VG+HIADVSYFV P
Sbjct: 1243 FQIPKIEYERRRDFRSHCVITIDPKDAKDFDDALHITRLNNGLYQVGIHIADVSYFVYPN 1302
Query: 559 TALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW 618
+ LD A R+TSVY++Q+ IPMLP +LS+ + SL P DRLAFSI + G++VD W
Sbjct: 1303 SPLDKRAADRTTSVYLVQKVIPMLPPILSQHLCSLVPNEDRLAFSILLTVKENGEIVDEW 1362
Query: 619 IGRTVIRSCCKLSYEHAQDII---DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 675
GR++IRS C+L+Y+ A II +E + L E P+ F + D+ + SL+
Sbjct: 1363 FGRSIIRSRCRLTYDEAWSIIQMTQSNPAIEDKSCLLEFLPKPEAPFTFEDLQHCLSSLH 1422
Query: 676 EVSKILKDKRFTDGALRLENSKPVFLF-----------DEYGT---PYDSVLSGREDLNF 721
+++ L+ R +GA+ LE + F F +E T P + R +
Sbjct: 1423 LIAQNLRSHRIENGAVSLEKLELNFNFPKPLSVMEKCTNECSTTRWPQGFSVKVRNPAHH 1482
Query: 722 LFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQF 781
L EE+M++AN++ A + F A LR HP P + + + F L D
Sbjct: 1483 LIEEWMIVANQSVARFLFGNFIKRATLRNHPKPEKKNISYDDHFL--RMLSFDP------ 1534
Query: 782 HQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFT 841
QS+ Q ++NY W HY L+ P+YTHFT
Sbjct: 1535 -QSILQQNNI---------TMLNYT--------------------W-HYGLSIPLYTHFT 1563
Query: 842 SPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLE 901
SP+RRY DL+VHR + L + + ++ ++N KD +S
Sbjct: 1564 SPIRRYADLMVHRQIARILGCDNYVYPELQISFQSNDDS-----------IQKDIKDS-- 1610
Query: 902 GREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLK 952
DI + VA CNDR+L R +A L++ L+
Sbjct: 1611 -----------------DIDLLVA-WCNDRRLKARRAGEASQHLFLTACLR 1643
Score = 48.1 bits (113), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Query: 160 FAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEGD 219
+ PHWS + + + G R+N N + Y K DV I+ +A++NRA+ D
Sbjct: 76 YYPHWSHDDLISGVRNGTLLSGNLRINPKNFEDGYVKHPAGDADVYISTLASRNRALPND 135
Query: 220 FVLIKVDRLSLWAKMKGFSNNSSIVE--DSN 248
V + ++ W F + S+I E DSN
Sbjct: 136 IVAVMLEPKRNWRVFDSFIDESTIREIGDSN 166
>gi|402874631|ref|XP_003901136.1| PREDICTED: DIS3-like exonuclease 1 [Papio anubis]
Length = 1054
Score = 286 bits (733), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 186/522 (35%), Positives = 286/522 (54%), Gaps = 38/522 (7%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 330 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 372
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK I+ ++ +A + +V RID W S +P H + V GR G++
Sbjct: 373 RIPK-----------IRISTQQAEALQDFRVVV-RIDSWESTSVYPNGHFVRVLGRIGDL 420
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLR-NFCIFTIDPS 523
E +I IL EN+I FS + +P PW+V +EE RKDLR + +F+IDP
Sbjct: 421 EGEIATILVENSISVIPFSEAQMCEMPVNTPENPWKVSREEEQKRKDLRKSHLVFSIDPK 480
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
D+DD LSI L++G +GVHIADV++FV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 481 GCEDVDDTLSIRTLNNGNLELGVHIADVTHFVAPNSYIDIEARTRATTYYLADRRYDMLP 540
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLN-SAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
+LS ++ SL GVDR A SI W+L+ ++ ++ + W GRT+IRS KL YE AQ+++DG
Sbjct: 541 SVLSADLCSLLGGVDRYAVSIMWELDKTSYEIKEVWYGRTIIRSAYKLFYEAAQELLDGN 600
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
F V + + Q + ++V +I L ++++ ++ KR GAL LE +
Sbjct: 601 FSVVDDIPEFKDLDEKSRQAKLEELVWAIGKLTDIARHVRAKRDGCGALELEGVEVRVQL 660
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
D+ +D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 661 DDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 720
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
G +DT S+ SL+ A + D ++ +L + AT+ M A YF +G
Sbjct: 721 RECAKAKGFFIDTRSNKTLADSLDNAND--PHDPIVNRLLRSMATQAMSNALYFSTGSCA 778
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ +K
Sbjct: 779 EE-EFHHYGLALDTYTHFTSPIRRYSDIVVHRLLMAAISKDK 819
Score = 45.1 bits (105), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 45/80 (56%), Gaps = 8/80 (10%)
Query: 154 EARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHN-RLEAYCKIEGVQT-------DVL 205
E+ K + H +E + ++ G + + VN H ++EA+ +++G + D+L
Sbjct: 219 ESHGKEYPEHLPLEVLEAGIKSGRYIQGILNVNKHRAQIEAFVRLQGASSKDSDLVSDIL 278
Query: 206 ITGIAAQNRAVEGDFVLIKV 225
I G+ A+NR++ GD V++++
Sbjct: 279 IHGMKARNRSIHGDVVVVEL 298
>gi|355692812|gb|EHH27415.1| hypothetical protein EGK_17608 [Macaca mulatta]
Length = 971
Score = 286 bits (733), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 186/522 (35%), Positives = 285/522 (54%), Gaps = 38/522 (7%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTGRVV I++++ RD +V F + + +G K A+K I +TP
Sbjct: 247 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KTAQK------------ILVTPWDY 289
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK I+ ++ +A + +V RID W S +P H + V GR G++
Sbjct: 290 RIPK-----------IRISTQQAEALQDFRVVV-RIDSWESTSVYPNGHFVRVLGRIGDL 337
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLR-NFCIFTIDPS 523
E +I IL EN+I FS + +P PW+V +EE RKDLR + +F+IDP
Sbjct: 338 EGEIATILVENSISVIPFSEAQMCEMPVNTPENPWKVSREEEQKRKDLRKSHLVFSIDPK 397
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
D+DD LSI L++G +GVHIADV++FV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 398 GCEDVDDTLSIRTLNNGNLELGVHIADVTHFVAPNSYIDIEARTRATTYYLADRRYDMLP 457
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLN-SAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
+LS ++ SL GVDR A SI W+L+ ++ ++ + W GRT+IRS KL YE AQ+++DG
Sbjct: 458 SVLSADLCSLLGGVDRYAVSIMWELDKTSYEIKEVWYGRTIIRSAYKLFYEAAQELLDGN 517
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
F V + + Q + ++V +I L ++++ ++ KR GAL LE +
Sbjct: 518 FSVVDDIPEFKDLDEKSKQAKLEELVWAIGKLTDIARHVRAKRDGCGALELEGVEVRVQL 577
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
D+ +D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 578 DDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 637
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
G +DT S+ SL+ A + D ++ +L + AT+ M A YF +G
Sbjct: 638 RECAKAKGFFIDTRSNKTLADSLDNAND--PHDPIVNRLLRSMATQAMSNALYFSTGSCA 695
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ +K
Sbjct: 696 EE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDK 736
Score = 45.1 bits (105), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 45/80 (56%), Gaps = 8/80 (10%)
Query: 154 EARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHN-RLEAYCKIEGVQT-------DVL 205
E+ K + H +E + ++ G + + VN H ++EA+ +++G + D+L
Sbjct: 136 ESHGKEYPEHLPLEVLEAGIKSGRYIQGILNVNKHRAQIEAFVRLQGASSKDSDLVSDIL 195
Query: 206 ITGIAAQNRAVEGDFVLIKV 225
I G+ A+NR++ GD V++++
Sbjct: 196 IHGMKARNRSIHGDVVVVEL 215
>gi|198429347|ref|XP_002132066.1| PREDICTED: similar to RIKEN cDNA 2810028N01 [Ciona intestinalis]
Length = 920
Score = 286 bits (732), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 181/520 (34%), Positives = 259/520 (49%), Gaps = 58/520 (11%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTG+VV II+RS W Y G S P+ TP
Sbjct: 313 PTGKVVGIIKRS--------------WRPYCG--------ILESFGSPEMTRHLFTPAEK 350
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ P++ + + I +R + ID W S +PQ H + G G+
Sbjct: 351 RIPRIRIETRQAKTLIGQR------------IVVAIDSWPRFSKYPQGHFVKALGSVGDK 398
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDL 528
+ + +L E+ + FS L+CLP W +P+EE R+D R+ I ++DP TD+
Sbjct: 399 DTENEVLLLEHDVAHEPFSQAVLNCLPPSDWSIPKEEFAVREDFRDLPICSVDPPGCTDI 458
Query: 529 DDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSE 588
DD L + L DG VGVHIADV++F+ PGT +D EA R TSVY+ ++I M+P LLS
Sbjct: 459 DDCLHHKDLGDGTVEVGVHIADVTHFIRPGTPIDNEAATRGTSVYLCDKRIDMVPELLSS 518
Query: 589 EVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESS 648
+ SL DRLAFS W + ++V ++VIRS ++Y AQ ID K +
Sbjct: 519 NLCSLRDDGDRLAFSCIWIMKPNAEIVSTRFCKSVIRSKSSMTYAQAQMQIDDK-TAKDP 577
Query: 649 NTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGT 707
T+G ++ L +++KILK R GAL L + + F D E
Sbjct: 578 VTMG------------------LRGLNKLAKILKHDRIEKGALSLSSPEVRFHVDSETHD 619
Query: 708 PYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCS 767
P D D N + EEFMLLAN + A+ I + FP+ A+LRRHP P F
Sbjct: 620 PIDLQNKELRDTNSMVEEFMLLANCSVAKKIQQEFPECAVLRRHPEPPQSNFDVFLNAAK 679
Query: 768 KHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTD 826
GL+L+ ++S SL++ E + + L+ ATR M A YFCSG ++D
Sbjct: 680 SRGLELNAATSRDLAVSLDRTEEPKEGIHSYISTLLRILATRCMMQAVYFCSG---LESD 736
Query: 827 WGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
+ HY LA P+YTHFTSP+RRY D++VHR L A++ A+K +
Sbjct: 737 FRHYGLAAPIYTHFTSPIRRYSDIMVHRLLAASIGADKTF 776
>gi|355778118|gb|EHH63154.1| hypothetical protein EGM_16066 [Macaca fascicularis]
Length = 971
Score = 286 bits (732), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 186/522 (35%), Positives = 285/522 (54%), Gaps = 38/522 (7%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTGRVV I++++ RD +V F + + +G K A+K I +TP
Sbjct: 247 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KTAQK------------ILVTPWDY 289
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK I+ ++ +A + +V RID W S +P H + V GR G++
Sbjct: 290 RIPK-----------IRISTQQAEALQDFRVVV-RIDSWESTSVYPNGHFVRVLGRIGDL 337
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLR-NFCIFTIDPS 523
E +I IL EN+I FS + +P PW+V +EE RKDLR + +F+IDP
Sbjct: 338 EGEIATILVENSISVIPFSEAQMCEMPVNTPENPWKVSREEEQKRKDLRKSHLVFSIDPK 397
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
D+DD LSI L++G +GVHIADV++FV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 398 GCEDVDDTLSIRTLNNGNLELGVHIADVTHFVAPNSYIDIEARTRATTYYLADRRYDMLP 457
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLN-SAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
+LS ++ SL GVDR A SI W+L+ ++ ++ + W GRT+IRS KL YE AQ+++DG
Sbjct: 458 SVLSADLCSLLGGVDRYAVSIMWELDKTSYEIKEVWYGRTIIRSAYKLFYEAAQELLDGN 517
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
F V + + Q + ++V +I L ++++ ++ KR GAL LE +
Sbjct: 518 FSVVHDIPEFKDLDEKSKQAKLEELVWAIGKLTDIARHVRAKRDGCGALELEGVEVRVQL 577
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
D+ +D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 578 DDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 637
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
G +DT S+ SL+ A + D ++ +L + AT+ M A YF +G
Sbjct: 638 RECAKAKGFFIDTRSNKTLADSLDNAND--PHDPIVNRLLRSMATQAMSNALYFSTGSCA 695
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ +K
Sbjct: 696 EE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDK 736
Score = 45.1 bits (105), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 45/80 (56%), Gaps = 8/80 (10%)
Query: 154 EARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHN-RLEAYCKIEGVQT-------DVL 205
E+ K + H +E + ++ G + + VN H ++EA+ +++G + D+L
Sbjct: 136 ESHGKEYPEHLPLEVLEAGIKSGRYIQGILNVNKHRAQIEAFVRLQGASSKDSDLVSDIL 195
Query: 206 ITGIAAQNRAVEGDFVLIKV 225
I G+ A+NR++ GD V++++
Sbjct: 196 IHGMKARNRSIHGDVVVVEL 215
>gi|335296984|ref|XP_003131067.2| PREDICTED: exosome complex exonuclease RRP44, partial [Sus scrofa]
Length = 740
Score = 286 bits (732), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 182/523 (34%), Positives = 266/523 (50%), Gaps = 65/523 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 406
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 122 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 158
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ P++ R+E A T+E + ID W S +P H + G
Sbjct: 159 DKRIPRI-------------RIETRQASTLEGRRIIVSIDGWPRNSRYPNGHFVKNLGEV 205
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
G+ E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ C+ ++DP
Sbjct: 206 GDKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCVCSVDPPGC 265
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 266 TDIDDALHCRELENGDLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 325
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 326 LSSNLCSLRSNVDRLAFSCIWEMNHNAEILKTRFTKSVINSKASLTYAEAQMRIDSAAMN 385
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
+S + S++ L +++KILK +R GAL L + + F D E
Sbjct: 386 DS-------------------ITASLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 426
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 427 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 486
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKD 823
L++ T ++ SL++ + + + L+ ATR M A YFCSG
Sbjct: 487 AAKSKNLEIKTDTAKALADSLDRVDSPI---FPYLNTLLRILATRCMMQAVYFCSG---M 540
Query: 824 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
D D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 541 DNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTY 583
>gi|410947519|ref|XP_003980492.1| PREDICTED: LOW QUALITY PROTEIN: exosome complex exonuclease RRP44
[Felis catus]
Length = 958
Score = 286 bits (732), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 183/523 (34%), Positives = 267/523 (51%), Gaps = 65/523 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 406
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 340 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 376
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ P++ R+E A T+E + ID W S +P H + G
Sbjct: 377 DKRIPRI-------------RIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVKNLGEV 423
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
G+ E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ C+ ++DP
Sbjct: 424 GDKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCVCSVDPPGC 483
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 484 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 543
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS + SL VDRLAFS W++N +++ ++ I S L+Y AQ ID
Sbjct: 544 LSSNLCSLRCNVDRLAFSCIWEMNHNAEILKVRFTKSAINSKASLTYAEAQMRID----- 598
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
S + + D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 599 --STAMND------------DITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 644
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 645 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 704
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKD 823
L++ T ++ SL++A + + L+ ATR M A YFCSG
Sbjct: 705 AAKSKNLEIKTDTAKSLADSLDRADSP---TFPYLNTLLRILATRCMMQAVYFCSG---M 758
Query: 824 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
D D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 759 DNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTY 801
>gi|357517627|ref|XP_003629102.1| Exosome complex exonuclease [Medicago truncatula]
gi|355523124|gb|AET03578.1| Exosome complex exonuclease [Medicago truncatula]
Length = 1045
Score = 286 bits (731), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 166/460 (36%), Positives = 250/460 (54%), Gaps = 38/460 (8%)
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
++PK+ + + L + + KR + +D W+ +S +P H + G+ G+
Sbjct: 491 RFPKIRIQTRQLENLLDKR------------IIVSVDSWDRQSRYPSGHYVRTVGKIGDK 538
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLS--RKDLRNFCIFTIDPSTAT 526
+ + +L EN I FS + L+CLP +PW V E+L R+DLR+ +F++DP
Sbjct: 539 DTETEVVLIENDINSRPFSAQVLACLPPLPWSVSSEDLSIPFRQDLRHLRVFSVDPPGCK 598
Query: 527 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 586
D+DDAL L +G VGVHIADV+ FV PGT LD EA R TSVY+++++I MLP L
Sbjct: 599 DIDDALHCIALPNGNFDVGVHIADVTNFVFPGTPLDDEASQRGTSVYLVEKRIDMLPKPL 658
Query: 587 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 646
+E+V SL V+RLAFS+ W++ D++ ++VI+S LSY AQ +D ++
Sbjct: 659 TEDVCSLRSDVERLAFSVIWEMTPEADIISTRYTKSVIKSAAALSYVEAQARMDDSRLMD 718
Query: 647 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EY 705
T ++++ ++K ++ +R +GAL L +++ F D E
Sbjct: 719 PVTT-------------------DLRNMNSLAKKMRLRRIENGALTLASAEVKFQIDTET 759
Query: 706 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAF 765
P D + ++ N + EEFML AN + A+ I ++FP +LLRRHP P L
Sbjct: 760 HNPLDIGIYQIKEANQMVEEFMLAANVSVAQQILKSFPLCSLLRRHPTPTKEMLEPLLRV 819
Query: 766 CSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDT 825
+ GL LD SSS SL+ A + DD ++ TR M A YFCSGD
Sbjct: 820 SAAIGLNLDVSSSKALADSLDHA---VGDDPYFNKLIRILTTRCMSQAVYFCSGDLS-PP 875
Query: 826 DWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 865
++ HY LA P+YTHFTSP+RRY D++VHR L A++ KL
Sbjct: 876 EYHHYGLATPLYTHFTSPIRRYADVIVHRLLAASIGISKL 915
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%)
Query: 146 DDNPSHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVL 205
+D H+ R I+A H M + L +G + RVN +N EAY E + +++
Sbjct: 204 EDVEDHRPSKRKIIYAEHKPMSEITSGLHRGIYHQGKLRVNRYNPFEAYVGSESIGDEII 263
Query: 206 ITGIAAQNRAVEGDFVLIKVDRLSLWAKMKGFS 238
I G + NRA +GD V +++ W K S
Sbjct: 264 IYGRSNMNRAFDGDIVAVELLPQDQWQGEKSMS 296
>gi|384252329|gb|EIE25805.1| RNB-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 1751
Score = 286 bits (731), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 217/717 (30%), Positives = 332/717 (46%), Gaps = 114/717 (15%)
Query: 160 FAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKI-EGVQT-DVLITGIAAQNRAVE 217
+ H A++ AL GD + + + + ++ +G+ +V I+G+ A NRA+
Sbjct: 266 YPAHLGASALDSALSSGDVLQGVLHMGRRGPKDGVVRVGQGMDAGEVQISGMQALNRAMH 325
Query: 218 GDFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCT 277
GD V +++ W ++ ++I+E+ GM
Sbjct: 326 GDVVAVRLLPRDQWP-----ASTAAILEEDVQEASPEGM--------------------- 359
Query: 278 LLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERL 337
D+D+SS A N G +IN T ++ + G+++ RL
Sbjct: 360 ---------DEDASSGAPN-------GAEHIN--------RTNFLAQA----GVSSDGRL 391
Query: 338 SAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPD 397
+P+G VV+I++RS A+ + LS D
Sbjct: 392 ----------QPSGEVVAIVQRS-------------------------AQDVAACLSQQD 416
Query: 398 REYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAH 457
+ P + ++ + D + + + + R+D W ES P H
Sbjct: 417 EAALLSNPDSLRSEAVLCVPMDRRLPLLRLRSRQLLQLVGQRFVVRVDSWQRESRHPSCH 476
Query: 458 VLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVP----WEVPQEELLSRKDLR 513
+ G ++ + +A+L + I FS +++ LP V W VP E R+DLR
Sbjct: 477 FVRTLGALNDMRAETDAVLVKAGIEWHPFSESAMAELPRVADPSHWSVPDAEAAVRRDLR 536
Query: 514 NF--CIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTS 571
+ I +IDP TD+DDALS+ L G +GVHIADVS+F G LD EA R T+
Sbjct: 537 SADQLICSIDPPGCTDVDDALSVRELPSGDLEIGVHIADVSHF---GGFLDGEAAARCTT 593
Query: 572 VYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR--WIGRTVIRSCCK 629
VY++ R++ MLP LLSE++ SL G DRLA S+ W L+ D+ DR W GRT+IRS +
Sbjct: 594 VYLVDRRLDMLPALLSEQLCSLRSGTDRLAVSVLWTLSP--DLHDRDVWFGRTIIRSRYQ 651
Query: 630 LSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDG 689
L Y+ AQDI+DG+ + + PQ + ++R++ +L ++ L+ R DG
Sbjct: 652 LEYQQAQDIMDGRPPRPEHDHIA---PQ-----DRPRLLRNLHTLARIAAHLRAGRLQDG 703
Query: 690 ALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLR 749
AL LE+++ F G P + + + + E M+ AN A I +AFP S LLR
Sbjct: 704 ALELESAELRFETAAEGQPTEVMGKAEVPMMAVVAEMMIFANSAVARRIHQAFPSSTLLR 763
Query: 750 RHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRP 809
RHP P +E EA C G LDTSS+ +SLE A D + ++ + TR
Sbjct: 764 RHPPPRQDAFKEVEALCEAGGCPLDTSSNAALSRSLEAA-VMASGDPAIGSLIKSLVTRA 822
Query: 810 MQLASYFCSGDFK-DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 865
M A YF SGD + H+ LA YTHFTSP+RRY D+VVHR L AAL + +
Sbjct: 823 MSEAEYFSSGDARPGGGGLSHFGLALQHYTHFTSPIRRYADVVVHRQLMAALNSPDM 879
>gi|431895894|gb|ELK05312.1| DIS3-like exonuclease 1 [Pteropus alecto]
Length = 1054
Score = 286 bits (731), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 183/522 (35%), Positives = 282/522 (54%), Gaps = 38/522 (7%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 330 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 372
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK I+ ++ +A + +V RID W S +P H + V G+ G++
Sbjct: 373 RIPK-----------IRISTQQAEALQDFRVVV-RIDSWESTSVYPNGHFVRVLGKIGDL 420
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLR-NFCIFTIDPS 523
E +I IL EN+I + FS + +P PW+V EE RKDLR +F+IDP
Sbjct: 421 EGEIATILVENSISVAPFSEAQMCEMPVNTPENPWKVSPEEERERKDLRKTHLVFSIDPK 480
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
D+DD LS+ LS+G +GVHIADV++FV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 481 GCEDVDDTLSVRTLSNGDLELGVHIADVTHFVAPNSYIDIEARTRATTYYLADRRYDMLP 540
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLN-SAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
+LS ++ SL G+DR A S+ W+L+ + ++ W GRT+IRS KL YE AQ+++DG
Sbjct: 541 SILSADLCSLLGGIDRYAVSVMWELDKTTYEIKKVWYGRTIIRSSYKLFYEAAQELLDGN 600
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
F++ + Q + D+V +I L ++++ ++ KR GAL LE +
Sbjct: 601 FNIIDDIPEFRDLDEKSRQAKLEDLVWAIGKLTDIARHVRAKRDRCGALELEGVEVRVQL 660
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
DE D + +++ EFM+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 661 DEKKNIQDLIPKQPLEVHETVAEFMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 720
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
G +DT S+ SL+ A + D ++ +L + A + M A YF +G
Sbjct: 721 RECAKAKGFFIDTRSNKTLADSLDNAND--PSDPIVNRLLRSMAAQAMSNALYFSTGSCA 778
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
++ ++ HY LA YTHFTSP+RRY D++VHR L AA+ +K
Sbjct: 779 EE-EFHHYGLALDKYTHFTSPIRRYSDIIVHRLLMAAISKDK 819
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 48/87 (55%), Gaps = 10/87 (11%)
Query: 147 DNPSHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHN-RLEAYCKIEGVQT--- 202
+N S +S R + H +E + ++ G + + VN H ++EA+ +++G +
Sbjct: 214 ENESQESHRR--EYPEHLPLEVLEAGIKSGRYIQGILNVNKHRAQIEAFVRLQGASSKDS 271
Query: 203 ----DVLITGIAAQNRAVEGDFVLIKV 225
D+LI G+ A+NR++ GD V++++
Sbjct: 272 GLFSDILIHGMKARNRSIHGDMVVVEL 298
>gi|403365627|gb|EJY82601.1| RNB-like protein [Oxytricha trifallax]
Length = 1463
Score = 286 bits (731), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 211/646 (32%), Positives = 305/646 (47%), Gaps = 91/646 (14%)
Query: 348 RPTGRVVSIIERSPR-RDGIVGFLNVNQWFNYKGG------SRKDAKKNRSSLSVPDREY 400
RP G + +II R ++ +V + V + S D KKN S
Sbjct: 719 RPMGIIKAIISSPSREKEHLVTLIKVESSMEFDEKALQNLISLHDQKKNAVSTG------ 772
Query: 401 IQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLH 460
I P K P M + ++P + + ++ I ++ W + P +V+
Sbjct: 773 IFAVPVSKKLPWMALF--NIPIELIQDIK-SKKKINQRYYIVKMMPWKAHATRPACNVIS 829
Query: 461 VFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV----------------PWEVPQE 504
G G ++ + +L + I + E V W +PQE
Sbjct: 830 SIGEAGNLDAESMRLLKMHEIWSDEYETEGQKINEKVHESLRIFTKDIDEKSGEWIIPQE 889
Query: 505 ELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIE 564
E+ R DLRN IFTIDP TA DLDDALSI+++SD I +GVHIADVSYFV GT LD E
Sbjct: 890 EIARRVDLRNKRIFTIDPITAKDLDDALSIDKISDFIYEIGVHIADVSYFVQQGTELDKE 949
Query: 565 AQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW----IG 620
AQ+R TSVY + + PMLP LL E + SLNP VDRLA+SIF+ ++ +D+ I
Sbjct: 950 AQLRCTSVYFVHKVYPMLPRLLCERLCSLNPKVDRLAYSIFFRMDIRTGELDKTYTPRIQ 1009
Query: 621 RTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKI 680
RTVI++C K Y+ QDI+DGK ES L E + + G ++S++ + E+++
Sbjct: 1010 RTVIKTCAKWHYQLVQDILDGKISQESQ--LDEQYKPING-VKFSEMRDDCFLMNEIAQK 1066
Query: 681 LKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 739
+ KR G++ L N + F D E P+D S R + FL EE+MLLAN AE +
Sbjct: 1067 RRKKRLEHGSILLSNREFCFALDPETKMPFDFSESYRIESKFLVEEYMLLANILIAEHLH 1126
Query: 740 RAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQ-LDTSSSGQFHQSLEQAREKLKDDYVL 798
+ D LLR HP K + + F K GL+ +D + S SLE RE D
Sbjct: 1127 QYCKDKTLLRAHPDVEDEKKLKLKVFFEKVGLESIDLTDSQTLSVSLENLRE--TGDSAK 1184
Query: 799 FDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNA 858
F++ + +Q A Y C D + D ++ H+ L FP+YTHFTSP+RRY DL+VHR +
Sbjct: 1185 FNVAMRKFLTCLQCAKYMCINDAQ-DREYMHFGLNFPLYTHFTSPIRRYADLLVHRLVTL 1243
Query: 859 ALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCA 918
L+ H+EG R +A + Y
Sbjct: 1244 TLQ----------------HKEGTRD----------------------LIAQMDYS---- 1261
Query: 919 DILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEV-LFSCLIL 963
N A C+++ + AC +L+ +LLK K V +F L+
Sbjct: 1262 ----NYADMCSEKSYNAKRASQACSRLFHCLLLKTKGVSVFETLLF 1303
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Query: 160 FAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEGD 219
+ H + E + E +++G F+ + RVN +NR A+ + ++ DV++ G+ QNR ++GD
Sbjct: 442 YEEHLNEEQIQEGIKQGFLFEGILRVNQNNRKRAFVHVNDIKFDVMVDGLIQQNRGLDGD 501
Query: 220 FVLIKVDRLSLWAKMKGFSNNSSIVEDS 247
V++++ + W K SNN + +DS
Sbjct: 502 TVIVQLLEPTRWQKY--VSNNVVVGKDS 527
>gi|291233829|ref|XP_002736854.1| PREDICTED: mKIAA1955 protein-like [Saccoglossus kowalevskii]
Length = 989
Score = 285 bits (730), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 194/549 (35%), Positives = 288/549 (52%), Gaps = 44/549 (8%)
Query: 322 VSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG 381
+S ++ ++G IE AMI S PTGRV+ I++R+ W +Y
Sbjct: 304 ISLTETHEG---IENTEAMIDS-SNVMPTGRVIGILQRN--------------WRDYVAS 345
Query: 382 SRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVA 441
D K+N+ + S + + + P + PK+ + + DS+ GD V
Sbjct: 346 FSAD-KENKGNTSKAGK--VLVIPWDYRIPKIRISTRQ-SDSL------GD-----HRVI 390
Query: 442 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV---- 497
RID W +S +P H + G G++E +I++IL EN+I FS + LP
Sbjct: 391 VRIDSWPVDSQYPNGHFVQTLGSIGKLETEISSILVENSISIRSFSEGQIKELPSNSSDD 450
Query: 498 PWEVPQEELLSRKDLRN-FCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVL 556
PW + EE+ R+DLR+ IF+IDP D+DD LS+ +L +G +GVHIADVSYFV
Sbjct: 451 PWTIDPEEVARRQDLRDSHLIFSIDPKGCEDVDDTLSVRQLPNGNIELGVHIADVSYFVK 510
Query: 557 PGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD 616
P + D+EA+ R+T+VY+ R+ MLP +LS ++ SL G DR A S+ W L+ DV+D
Sbjct: 511 PNSLTDLEAKSRATTVYLADRRYDMLPPILSADLCSLIGGEDRYAMSVLWQLSPNYDVID 570
Query: 617 RWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 676
W GRTVIRS K+ YE AQ + DGK DV EG + Q ++ SI +L
Sbjct: 571 VWYGRTVIRSAYKMFYEAAQALHDGK-DVRDDIPELEGLDEEVIQERLRELNFSISTLMS 629
Query: 677 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 736
+++ LK KR + GA++LE + + D V +++ E M+ AN A+
Sbjct: 630 IARHLKSKRESGGAVQLEGLEIQVQLSDKKDIQDLVPKQALEIHETIAECMIFANHWVAK 689
Query: 737 VIARAFPDSALLRRHPAPNMRKLREFEAFCSK-HGLQLDTSSSGQFHQSLEQAREKLKDD 795
I AFP ALLR HP P +C+K G +DTS++ SL++ + + +
Sbjct: 690 KITEAFPSFALLRHHPLPRQEHFENL-LYCAKSKGFSVDTSTNKNLADSLDRCVD--EKN 746
Query: 796 YVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRT 855
+ +L AT M A YF +G D + HY LA YTHFTSP+RRY D++VHR
Sbjct: 747 PIFNKLLRTLATYAMSNALYFSTGSLSRD-QFYHYGLALDRYTHFTSPIRRYADIIVHRL 805
Query: 856 LNAALEAEK 864
L AA++ ++
Sbjct: 806 LMAAIKEDE 814
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 17/111 (15%)
Query: 158 KIFAPHWSMEAVNEALEKGDAFKALYRVNAHN-RLEAYC-------KIEGVQTDVLITGI 209
K + + E ++ ++ G + VN H + EA+ K G +D++I+G+
Sbjct: 218 KGYKEYLPQEILSAGIKSGRYIQGCVHVNKHRPQREAFVQRAGGGMKESGTDSDIIISGM 277
Query: 210 AAQNRAVEGDFVLIKVDRLSLWA--------KMKGFSNNSSIVEDSN-LPT 251
A+NRAV+GD V +++ S W +G N ++++ SN +PT
Sbjct: 278 LARNRAVDGDIVAVELLPKSQWVGKIISLTETHEGIENTEAMIDSSNVMPT 328
>gi|294938708|ref|XP_002782159.1| exosome complex exonuclease rrp44, putative [Perkinsus marinus ATCC
50983]
gi|239893657|gb|EER13954.1| exosome complex exonuclease rrp44, putative [Perkinsus marinus ATCC
50983]
Length = 982
Score = 285 bits (730), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 184/527 (34%), Positives = 272/527 (51%), Gaps = 60/527 (11%)
Query: 356 IIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREY---------IQ--LT 404
IIE+ R +VG + N W Y G R ++ D+++ I+
Sbjct: 313 IIEKEGR---VVGIIKRN-WREYAGTLRPIQQEEEEQPQQGDKQHGGGMIGYSKIERIFI 368
Query: 405 PTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGR 464
P +P+ P + ++ K D R + +D W+ S PQ H + GR
Sbjct: 369 PANPRIPNIRIVTKHSNDLDNMR------------ICVVMDTWDRTSRLPQGHWSRILGR 416
Query: 465 GGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPST 524
GE + + + IL+E+ + FS + + CLP ++ +EE+ R DLRN + +IDP
Sbjct: 417 CGERDTESSVILHEHNVITRDFSDDVMRCLPPKDFQPDEEEISRRLDLRNVTVCSIDPPG 476
Query: 525 ATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPV 584
D+DDALS E L +G R+GVHIADV++FV P TA+D EA R T+VY+++R+ MLP
Sbjct: 477 CKDIDDALSCEVLDNGNWRIGVHIADVTHFVHPNTAIDKEAAERCTTVYLVERRTDMLPS 536
Query: 585 LLSEEVGSLNPGVDRLAFSIFWD--LNSAG------DVVDRWIGRTVIRSCCKLSYEHAQ 636
LL+ ++ SL G DRL FS+ W+ LN +V+ + +I S LSY AQ
Sbjct: 537 LLTTDLCSLVGGKDRLCFSVLWEFQLNKKNGNEEVLKIVNTQFHKAIINSNAALSYAEAQ 596
Query: 637 DIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENS 696
ID K D SD+ +SI+ L + + I++ KR GAL L +
Sbjct: 597 ARIDDKNDN-------------------SDLTQSIRRLLKAAMIIRRKRMAGGALELASQ 637
Query: 697 KPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPN 755
+ F D E P D +D N L EEFMLLAN + AE I + FP +++LRRHP P
Sbjct: 638 EVRFELDSETSDPTDVAEYTMKDTNRLVEEFMLLANTSVAEQILKHFPSNSVLRRHPPPK 697
Query: 756 MRKLREFEAFCSKHGLQ-LDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLA 813
++L+ + K G++ S+ + +SL K D Y F+ L+ TR M A
Sbjct: 698 EQQLKSLRSLLEKQGVKGFQFGSNRELSRSLNTVCNKKDDPY--FNRLVRIMTTRTMNQA 755
Query: 814 SYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
YFC+G+ ++ + HY LA +YTHFTSP+RRY D++VHR L A+L
Sbjct: 756 QYFCTGEVENGM-FSHYGLAMGLYTHFTSPIRRYADILVHRLLMASL 801
>gi|440907164|gb|ELR57340.1| Exosome complex exonuclease RRP44 [Bos grunniens mutus]
Length = 960
Score = 285 bits (730), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 181/523 (34%), Positives = 267/523 (51%), Gaps = 65/523 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 406
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 342 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 378
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ P++ R+E A T+E + +D W S +P H + G
Sbjct: 379 DKRIPRI-------------RIETRQASTLEGRRIIVAVDGWPRNSRYPNGHFVKNLGEV 425
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
G+ E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ C+ ++DP
Sbjct: 426 GDKETETEVLLLEHDVPHQAFSQAVLSFLPKMPWSITEKDMKNREDLRHLCVCSVDPPGC 485
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 486 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 545
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS + SL VDRLAFS W++ +++ ++VI S L+Y AQ ID
Sbjct: 546 LSSNLCSLRSNVDRLAFSCIWEMTHNAEILKTRFTKSVINSKASLTYAEAQMRID----- 600
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
S + + ++ S++ L +++KILK R GAL L + + F D E
Sbjct: 601 --SAAMND------------NITTSLRGLNKLAKILKKGRIEKGALTLSSPEVRFHMDSE 646
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 647 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 706
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKD 823
L++ T ++ SL++A + + + L+ ATR M A YFCSG
Sbjct: 707 AAKSKNLEIKTDTAKALADSLDRADSPI---FPYLNTLLRILATRCMMQAVYFCSG---M 760
Query: 824 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
D D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 761 DNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTY 803
>gi|302565360|ref|NP_001181400.1| DIS3-like exonuclease 1 [Macaca mulatta]
gi|380788789|gb|AFE66270.1| DIS3-like exonuclease 1 isoform 1 [Macaca mulatta]
gi|380788791|gb|AFE66271.1| DIS3-like exonuclease 1 isoform 1 [Macaca mulatta]
Length = 1054
Score = 285 bits (729), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 186/522 (35%), Positives = 285/522 (54%), Gaps = 38/522 (7%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTGRVV I++++ RD +V F + + +G K A+K I +TP
Sbjct: 330 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KTAQK------------ILVTPWDY 372
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK I+ ++ +A + +V RID W S +P H + V GR G++
Sbjct: 373 RIPK-----------IRISTQQAEALQDFRVVV-RIDSWESTSVYPNGHFVRVLGRIGDL 420
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLR-NFCIFTIDPS 523
E +I IL EN+I FS + +P PW+V +EE RKDLR + +F+IDP
Sbjct: 421 EGEIATILVENSISVIPFSEAQMCEMPVNTPENPWKVSREEEQKRKDLRKSHLVFSIDPK 480
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
D+DD LSI L++G +GVHIADV++FV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 481 GCEDVDDTLSIRTLNNGNLELGVHIADVTHFVAPNSYIDIEARTRATTYYLADRRYDMLP 540
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLN-SAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
+LS ++ SL GVDR A SI W+L+ ++ ++ + W GRT+IRS KL YE AQ+++DG
Sbjct: 541 SVLSADLCSLLGGVDRYAVSIMWELDKTSYEIKEVWYGRTIIRSAYKLFYEAAQELLDGN 600
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
F V + + Q + ++V +I L ++++ ++ KR GAL LE +
Sbjct: 601 FSVVDDIPEFKDLDEKSKQAKLEELVWAIGKLTDIARHVRAKRDGCGALELEGVEVRVQL 660
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
D+ +D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 661 DDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 720
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
G +DT S+ SL+ A + D ++ +L + AT+ M A YF +G
Sbjct: 721 RECAKAKGFFIDTRSNKTLADSLDNAND--PHDPIVNRLLRSMATQAMSNALYFSTGSCA 778
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ +K
Sbjct: 779 EE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDK 819
Score = 45.1 bits (105), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 45/80 (56%), Gaps = 8/80 (10%)
Query: 154 EARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHN-RLEAYCKIEGVQT-------DVL 205
E+ K + H +E + ++ G + + VN H ++EA+ +++G + D+L
Sbjct: 219 ESHGKEYPEHLPLEVLEAGIKSGRYIQGILNVNKHRAQIEAFVRLQGASSKDSDLVSDIL 278
Query: 206 ITGIAAQNRAVEGDFVLIKV 225
I G+ A+NR++ GD V++++
Sbjct: 279 IHGMKARNRSIHGDVVVVEL 298
>gi|340368344|ref|XP_003382712.1| PREDICTED: exosome complex exonuclease RRP44-like [Amphimedon
queenslandica]
Length = 948
Score = 285 bits (729), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 205/593 (34%), Positives = 287/593 (48%), Gaps = 86/593 (14%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG--SRKDAKKNRSSLSVPDREYIQLTP 405
+PTG+VV II+R+ W Y G +D K R + P
Sbjct: 339 QPTGKVVGIIKRN--------------WRPYCGTLLPLQDMKGFRHTF----------VP 374
Query: 406 THPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ P++ + + P+ + KR + ID W+ + FP H + G
Sbjct: 375 AERRIPRIRIETRQGPNLLGKR------------IMVSIDAWSRLARFPSGHFVKELGPI 422
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
G+ E + +L E+ + FSP L LP PW + EE+ R DLR+ I ++DP
Sbjct: 423 GDRETENEVLLLEHDVPHLPFSPAVLKDLPQTPWVITDEEISKRLDLRHLSICSVDPPGC 482
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
TD+DDAL L +G VGVHIADVS+F+ P TALD EA R T+VY+ +++I M+P L
Sbjct: 483 TDIDDALHYRELDNGNVEVGVHIADVSHFIRPKTALDEEASNRGTTVYLAEKRIDMVPEL 542
Query: 586 LSEEVGSLNPGVDRLAFSIFWDL--NSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKF 643
LS + SL G +RLAFS+ W++ + A V R++ +TVI S L+Y AQ ID K
Sbjct: 543 LSSNLCSLRSGEERLAFSVLWEMSPDDAHIVSTRFV-KTVIESKESLTYAEAQMKIDDK- 600
Query: 644 DVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD 703
+L + DV S++ L ++KILK +R GAL L + + F D
Sbjct: 601 ------SLRD------------DVTTSLRGLNSLAKILKGRRLEAGALTLASPEIRFEID 642
Query: 704 -EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
E P D + ++ N L EEFMLLAN + AE I AFPD ALLRRHP P
Sbjct: 643 SETHDPIDLINKELKETNSLVEEFMLLANVSVAEAIYEAFPDCALLRRHPPPPTSNYDIL 702
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
G L S+ SLE AR + D+ +L ATR M A YFCSG
Sbjct: 703 LKAAKGKGFDLIVDSAKSLADSLEMAR--IPDNEYFNTLLRIMATRCMMQAVYFCSGSIT 760
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY---------------W 867
++ HY LA P+YTHFTSP+RRY D++VHR L +++++ Y
Sbjct: 761 -YKEYHHYGLAAPIYTHFTSPIRRYSDIIVHRLLAVSIDSDVTYPLLLDKHHTQQLSNHL 819
Query: 868 KHRRMLPKNNHREGVRGRFLTGIFY-DKDAAES----LEGREALSVAALKYGV 915
HR + + R V T +F+ +KD E L R A+ V YG+
Sbjct: 820 NHRHKMAQYAQRSSV--SLHTHLFFKEKDKVEDGFVLLVRRNAIQVIIPAYGI 870
Score = 47.4 bits (111), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Query: 143 TNKDDNPSHQSEARCKIFAP-HWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQ 201
T D S +S R K++ P H ++ + L+ G + +R + N LE + I ++
Sbjct: 213 TIADGEDSDKSSTRKKVYFPEHLALSVIQRGLKTGKYLQGAFRGSRENYLEGFVSIPSLE 272
Query: 202 TDVLITGIAAQNRAVEGDFVLIKVDRLSLWAKMKGF 237
VL+ G+ NRAV D V +++ S W G
Sbjct: 273 KWVLVQGLENMNRAVHDDVVAVELFPESSWTSPCGI 308
>gi|242021768|ref|XP_002431315.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212516583|gb|EEB18577.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 753
Score = 285 bits (729), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 157/480 (32%), Positives = 261/480 (54%), Gaps = 12/480 (2%)
Query: 383 RKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAA 442
++ A S+++ Y+ P ++P++ + + P + E+ + +L A
Sbjct: 143 KRQAIGTLSTVTNKKVNYVIFCPRDMRFPRLKIKKSNCPSEFIQNPEKFNN----KLFLA 198
Query: 443 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVP 502
++ +WN+ F ++ G G ++ + NAI+ + + +P +
Sbjct: 199 KLSQWNDLQ-FADGELIEEVGTVGNIQAETNAIILGLGLKIPSYDENLKKYIPSNSMTMT 257
Query: 503 QEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALD 562
+EE+L R+D R C+FTIDP+TA DLDDA+S + LS+G +GVHI+DVS+++ T LD
Sbjct: 258 EEEILKREDFRKECVFTIDPATAVDLDDAVSCKELSNGNYEIGVHISDVSFYLKESTPLD 317
Query: 563 IEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRT 622
+ ++TSVY + + MLP L + SL PG D+L+FS+ W++ ++ +T
Sbjct: 318 LAVSQQATSVYFVDKVYHMLPYELC-RLCSLTPGEDKLSFSVLWEVTPDCQILRHRFAKT 376
Query: 623 VIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILK 682
VI SC + SYE Q II+ SSNT+ P+L+G + + IK L+E + L+
Sbjct: 377 VINSCAQFSYEQVQSIIND----SSSNTV--NLPKLHGSHKNIAIRNIIKKLFEFAFHLR 430
Query: 683 DKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAF 742
KRF +GALR++ K VF D P++ ++ ++L EE MLLAN T AE + +
Sbjct: 431 KKRFDNGALRIDRKKIVFCLDANLMPHEYRAEIHDESHYLIEELMLLANITVAEKLIEQY 490
Query: 743 PDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDIL 802
P+ A LR H P + L++ + + L LD +++G + L + +L
Sbjct: 491 PNIAFLRSHSPPVVFALQKLQKNLENYNLYLDITNAGSINNFLLKCSGSDSKSVARMLVL 550
Query: 803 INYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEA 862
N +PM A+Y+CSG+F +D + HYAL P+YTHFTSP+RRY D++VHR +++ + A
Sbjct: 551 NNLLAKPMTRATYYCSGNFSNDDERRHYALNVPLYTHFTSPIRRYADIMVHRLMSSYVNA 610
>gi|449305179|gb|EMD01186.1| hypothetical protein BAUCODRAFT_29619 [Baudoinia compniacensis UAMH
10762]
Length = 994
Score = 285 bits (729), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 224/726 (30%), Positives = 325/726 (44%), Gaps = 130/726 (17%)
Query: 154 EARCKIFAPHW-SMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQ 212
E + + P + SM A+ ++ G + ++ V+ +N LE + +++ G
Sbjct: 249 ETKAETLYPEYLSMSAMLTGVKNGTLHQGIFNVSPYNYLEGTVHVPAFDRALIVQGRENS 308
Query: 213 NRAVEGDFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYE 272
NRAV GD V+I+V W + +S ++E+ +L N
Sbjct: 309 NRAVSGDIVVIEVLPKDQWK-----APSSKVIEEEDLGKNENA----------------- 346
Query: 273 YSNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMN 332
D+ SSEA E R + H ++
Sbjct: 347 -------------EVDEDSSEAIVTERERRALQEEVRRAHGQVAEGK------------- 380
Query: 333 AIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSS 392
K+PT +VV II+R+ W Y G KD+ + R+
Sbjct: 381 --------------KQPTAKVVGIIKRN--------------WRQYVGHVDKDSVRTRTK 412
Query: 393 LSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESP 452
S ++ + L P + PK+ V + + +R V ID W+ ES
Sbjct: 413 DSRA-QQTVFLVPMDKRIPKIRVRTRQAAGLLGQR------------VLVTIDTWDRESR 459
Query: 453 FPQAHVLHVFG----RGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQE-- 504
+P H + G +G E E A+L E + F L CLP WEVP+
Sbjct: 460 YPVGHFIRSLGELETKGAETE----ALLLEWDVQYRPFPRTVLDCLPPEGHEWEVPKSVD 515
Query: 505 --ELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALD 562
R+DL + I +IDP D+DDAL L +G VGVHIADVS+FV P A+D
Sbjct: 516 DPGWTGRRDLTDLLICSIDPPGCVDIDDALHARLLPNGNFEVGVHIADVSHFVKPNNAMD 575
Query: 563 IEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRT 622
EA +R T+VY++ ++I MLP+LL ++ SL P ++R AFS+ W+L+ D+V ++
Sbjct: 576 KEASLRGTTVYLVDKRIDMLPMLLGTDLCSLKPYIERYAFSVIWELDKNADIVSSTFTKS 635
Query: 623 VIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILK 682
VIRS SYE AQ ID K + D+ + ++ L +SK L+
Sbjct: 636 VIRSREAFSYEAAQLRIDDK-------------------SQQDDLTKGMRHLMMLSKRLR 676
Query: 683 DKRFTDGALRLENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARA 741
KR GAL L + + V E P D D N L EEFMLLAN + A I A
Sbjct: 677 AKRMAAGALNLASPEVRVQTESETSDPVDVQTKQLLDTNQLVEEFMLLANISVASKIYEA 736
Query: 742 FPDSALLRRHPAPNMRKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFD 800
FP +ALLRRH AP E K G++L T SS SL++ ++ + F+
Sbjct: 737 FPQTALLRRHAAPPKTNFEELGNQLKVKKGMELHTDSSKAVADSLDKCVDQSEP---FFN 793
Query: 801 ILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAA 859
L+ ATR M A YFCSG + +++ HY LA +YTHFTSP+RRY DL HR L AA
Sbjct: 794 TLVRILATRCMMSAEYFCSGT-QAPSEFRHYGLASEIYTHFTSPIRRYADLEAHRQLAAA 852
Query: 860 LEAEKL 865
++ E L
Sbjct: 853 IDYEPL 858
>gi|223998142|ref|XP_002288744.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220975852|gb|EED94180.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 712
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 212/716 (29%), Positives = 336/716 (46%), Gaps = 102/716 (14%)
Query: 160 FAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTD----VLITGIAAQNRA 215
+ PH A++ L+ ++ +YR N + + Y I Q D V++ G + NRA
Sbjct: 1 YTPHVDSSALSHGLQTNRYYQGVYRSNRDSYNDGYVSIR--QGDDRVAVVVQGSSDVNRA 58
Query: 216 VEGDFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSN 275
V+GD V +++ L W + G E++G+ +SKV+
Sbjct: 59 VDGDIVAVELFSLDKW--LGG--------------EESSGV------DRSKVEK------ 90
Query: 276 CTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIE 335
L +KG + +D + A E ++ N TE+V+ + D
Sbjct: 91 ---LKQKGGNDNDGAGIAADTAEPTVKDIDNI-----------TEEVAVDEAGD------ 130
Query: 336 RLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWF---NYKGGSRKDAKKNRSS 392
+RPTG+VV II R+ ++ ++ K D +
Sbjct: 131 ----------LRRPTGKVVGIIRRNFHKNYCGSLCTIDDAAADAEEKSTHPHDIIAAKHE 180
Query: 393 LSVPD--REYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEE 450
PD + P+ P +++ R + + + M ++ + +D W +
Sbjct: 181 REHPDGITSTVVFFSVDPRVPPILL-----------RTTQRERLVGMRILVS-MDSWPAD 228
Query: 451 SPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRK 510
S +P H + G G + + +L E I C F + L+CLP +++ E R
Sbjct: 229 SEYPLGHYVKTLGVTGTKDTETQVLLQEFRIPCEPFPAKVLACLPPPDYKIELEP--GRA 286
Query: 511 DLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRST 570
DLR+ + +IDP D+DDAL L +G +VGVHIADV+++V G+A+D+EA RST
Sbjct: 287 DLRHIPVLSIDPPGCKDIDDALHCTELPNGNWQVGVHIADVTHYVEAGSAIDLEAANRST 346
Query: 571 SVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKL 630
S Y++ +++ MLP LL+ ++ SL VDR AFS+ W++ D+VD +++I S L
Sbjct: 347 STYLVNKRLDMLPSLLTTDLCSLKGNVDRFAFSVLWEVTPDADIVDVEFKKSIIHSIAAL 406
Query: 631 SYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGA 690
+Y+ AQ +ID K D + + + G ++K L +++ + +R GA
Sbjct: 407 TYQQAQSLID-KPDEDCKDDIQVG---------------AVKRLASLARKFRARRINAGA 450
Query: 691 LRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLR 749
L L + + F+ D E P D + N + EEFMLLAN T A+ I R +P ++LR
Sbjct: 451 LTLASPEVKFVLDSESLNPTDVQAYTLFEANAVVEEFMLLANVTVAKKILRHYPTLSILR 510
Query: 750 RHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRP 809
RHPAPN + + S + SL++A KD Y L +L +TR
Sbjct: 511 RHPAPNRSMFDSLMRKAKTQRVSICIDDSKKLADSLDEAGRTFKDPY-LDQLLRILSTRC 569
Query: 810 MQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 865
M A YFCSG+++ DW HY LA PVYTHFTSP+RRY D+ VHR L AA+ L
Sbjct: 570 MSPAQYFCSGEYQ-AKDWHHYGLAAPVYTHFTSPIRRYADVCVHRLLAAAIGVSPL 624
>gi|291392382|ref|XP_002712499.1| PREDICTED: DIS3 mitotic control homolog (S. cerevisiae)-like 2
[Oryctolagus cuniculus]
Length = 574
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 194/555 (34%), Positives = 281/555 (50%), Gaps = 54/555 (9%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
+F + S E V+E L++G + + R+N EA+ D+ I G+ A+NRA+ G
Sbjct: 49 VFETYLSKEDVSEGLKRGTLIQGILRINPKKFHEAFIPSPDGDRDIFIDGVVARNRALNG 108
Query: 219 DFVLIKVDRLSLWAKMKGFSNNSSI--VEDSNLPTEANGMH------SDICKGKSKVDVS 270
D V++++ W +K S++ +++L E G H D G DV
Sbjct: 109 DVVVVRLLPEEQWKVIKPESSDKEAEGAYEADLAEELCGHHLPQQSLKDCSDGP---DVI 165
Query: 271 YEYSNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDG 330
E SE G + ++ + + + G + P D E SSSQ
Sbjct: 166 IEAHLGDSDSEDGHGNTQNTLLDGVKKLSVCVHGEGKEDAGEPDRKD--ESASSSQDTRA 223
Query: 331 MN--AIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKK 388
++ +++R + +VV I+E+ R G L R A K
Sbjct: 224 LSEKSLQR-------------SAKVVYILEKKHSR-AATGVL------------RPLADK 257
Query: 389 NRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWN 448
+ R+Y +PT + P++ V +KD P R ++ T L RI +W
Sbjct: 258 SSELF----RKYALFSPTDHRVPRVYVPLKDCPQDFVGRPKDYANT----LFICRIVDWK 309
Query: 449 EESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC-VPWEVPQEELL 507
E+S F + G+ GE+EP+ IL E + S FS E L CLP +PW VP EE
Sbjct: 310 EDSNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLECLPQRLPWTVPPEEFN 369
Query: 508 SRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQV 567
R+DLR CIFTIDPSTA DLDDALS L+DG +VGVHIADVSYFV G+ LD A
Sbjct: 370 KRRDLRKDCIFTIDPSTARDLDDALSCRPLADGNFQVGVHIADVSYFVPEGSELDKVAAE 429
Query: 568 RSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSC 627
R+TSVY++Q+ +PMLP LL EE+ SLNP DRL FS+ W L G ++D W GRT+IRSC
Sbjct: 430 RATSVYLVQKVVPMLPRLLCEELCSLNPMTDRLTFSVIWTLTPEGKILDEWFGRTIIRSC 489
Query: 628 CKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFT 687
KLSY+HAQ +I+ + L P + + +V R++ +L+ +++ L+ +RF
Sbjct: 490 TKLSYDHAQSMIENPAEKIPETAL----PPVSPEHSSEEVHRAVLNLHGIAQKLRRQRFA 545
Query: 688 DGALRLENSKPVFLF 702
DGALRL+ P F
Sbjct: 546 DGALRLDQFLPRVPF 560
>gi|449509928|ref|XP_004176842.1| PREDICTED: LOW QUALITY PROTEIN: DIS3-like exonuclease 2
[Taeniopygia guttata]
Length = 816
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 191/557 (34%), Positives = 288/557 (51%), Gaps = 43/557 (7%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
IF + S E V+ L++G+ + R+N EA+ D+ I G+ A+NRA+ G
Sbjct: 49 IFEAYVSKEDVSAGLKRGELIQGPLRINPKKYHEAFIPSPDGSRDIFIDGVVARNRALNG 108
Query: 219 DFVLIKVDRLSLWAKMK--GFSNNSSIVEDSNLPTEANG--MHSDICKGKSKVDVSYEYS 274
D V++K+ W +K G + + +S++P + G + + KG ++
Sbjct: 109 DIVVVKLLPRDQWKVIKPDGSDKETEVTHESDVPEDMLGTCVPQETAKGDAQ-------- 160
Query: 275 NCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNY-INGHHPSTSDSTEKVSSSQQNDGMNA 333
+ ++ E +D + + Q+M+ + ++ + V ++Q+DG
Sbjct: 161 SPDVIIEAQFDDNDAEHGQDHLQDMLTDDIQKLSLDTAEKGKAAGVTGVKRTEQDDGPKV 220
Query: 334 IERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSL 393
+ ++ +R T +VV I+E+ R GF+ + R R ++
Sbjct: 221 ND--PRLLPDEFLQR-TAKVVYILEKKHSR-AATGFIKLL-------ADRNSELFKRCAM 269
Query: 394 SVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPF 453
+P + P++ V + D P + E A +M L RI +W E+S F
Sbjct: 270 ---------FSPVDHRVPRVYVPLADCPPDFVAKPE---AYSQM-LFICRIVDWKEDSNF 316
Query: 454 PQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC-VPWEVPQEELLSRKDL 512
+ G+ GE+EP+ IL E + S FSPE L CLP +PW + EL R+DL
Sbjct: 317 ASGQLCKSLGQAGEIEPESEGILTEYGVDFSDFSPEVLECLPQNLPWVISPGELAKRRDL 376
Query: 513 RNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSV 572
R CIFTIDPSTA DLDDALS ++L DG VGVHIADVSYFVL TALD A R+TSV
Sbjct: 377 RKECIFTIDPSTARDLDDALSCKQLPDGNLEVGVHIADVSYFVLEDTALDKVASERATSV 436
Query: 573 YMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSY 632
Y++Q+ IPMLP LL EE+ SLNP DRL FS+ W L G +++ W G+TVI SC KLSY
Sbjct: 437 YLVQKVIPMLPRLLCEELCSLNPMQDRLTFSVIWKLTPEGKILEEWFGQTVICSCVKLSY 496
Query: 633 EHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALR 692
+HAQ +ID V S L P + + +++ ++ SL+ V++ L+ +RFT+GAL
Sbjct: 497 DHAQSMIDSPGKVLSPEEL----PPVSPEHSIAEIQEAVLSLHRVAQRLRKQRFTEGALH 552
Query: 693 LENSKPVFLFD-EYGTP 708
L+ K F D E G P
Sbjct: 553 LDQMKLSFTLDQESGMP 569
Score = 86.7 bits (213), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 48/154 (31%)
Query: 800 DILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAA 859
++L +RPMQ+A YFC+G D+T + HYAL P YTHFTSP+RRY D+VVHR L+A+
Sbjct: 611 EVLTYMFSRPMQMALYFCTGVLHDETLFHHYALNVPFYTHFTSPIRRYADIVVHRLLSAS 670
Query: 860 LEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCAD 919
L A P +E ++ +
Sbjct: 671 LGARS---------PIRMEKEAIQKQ---------------------------------- 687
Query: 920 ILVNVATHCNDRKLACRNVKDACVKLYMWILLKK 953
A HCNDRK+A + V++ L+ + +++
Sbjct: 688 -----ADHCNDRKMASKRVQELSADLFFSVFVRE 716
>gi|114657753|ref|XP_001174666.1| PREDICTED: DIS3 mitotic control homolog (S. cerevisiae)-like
isoform 7 [Pan troglodytes]
gi|397515604|ref|XP_003828039.1| PREDICTED: DIS3-like exonuclease 1 [Pan paniscus]
Length = 971
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 184/522 (35%), Positives = 281/522 (53%), Gaps = 38/522 (7%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 247 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 289
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK+ + + T++ V RID W S +P H + V GR G++
Sbjct: 290 RIPKIRISTQQA------------ETLQDFRVVVRIDSWESTSVYPNGHFVRVLGRIGDL 337
Query: 469 EPQINAILYENAICCSGFSPESLSCLPC----VPWEVPQEELLSRKDLR-NFCIFTIDPS 523
E +I IL EN+I FS + +P PW+V EE RKDLR + +F+IDP
Sbjct: 338 EGEIATILVENSISVIPFSEAQMCEMPVNTPESPWKVSPEEEQKRKDLRKSHLVFSIDPK 397
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
D+DD LS+ L++G +GVHIADV++FV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 398 GCEDVDDTLSVRTLNNGNLELGVHIADVTHFVAPNSYIDIEARTRATTYYLADRRYDMLP 457
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
+LS ++ SL GVDR A SI W+L+ A ++ W GRT+IRS KL YE AQ+++DG
Sbjct: 458 SVLSADLCSLLGGVDRYAVSIMWELDKASYEIKKVWYGRTIIRSAYKLFYEAAQELLDGN 517
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
V + + Q + ++V +I L ++++ ++ KR GAL LE ++
Sbjct: 518 LSVVDDIPEFKDLDEKSRQAKLEELVWAIGKLTDIARHVRAKRDGCGALELEGAEVRVQL 577
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
D+ +D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 578 DDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 637
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
G +DT S+ SL+ A + D ++ +L + AT+ M A YF +G
Sbjct: 638 RECAKAKGFFIDTRSNKTLADSLDNAND--PHDPIVNRLLRSMATQAMSNALYFSTGSCA 695
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ +K
Sbjct: 696 EE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDK 736
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 94 MPTMHINEEESA--ESGSTQSQLLLATDLCGSIISRSCPEPIANDSSCWA-YTNKDDNPS 150
MP + + E+E A + GS + + T + + P+ A C + ++ + +
Sbjct: 75 MPIVMVTEDEEAIQQYGSETEGVFVIT--FKNYLDNFWPDLKAAHELCDSILQSRREREN 132
Query: 151 HQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHN-RLEAYCKIEGVQT------- 202
E+ K + H +E + ++ G + + VN H ++EA+ +++G +
Sbjct: 133 ESQESHGKEYPEHLPLEVLEAGIKSGRYIQGILNVNKHRAQIEAFVRLQGASSKDSDLVS 192
Query: 203 DVLITGIAAQNRAVEGDFVLIKV 225
D+LI G+ A+NR++ GD V++++
Sbjct: 193 DILIHGMKARNRSIHGDVVVVEL 215
>gi|18916779|dbj|BAB85541.1| KIAA1955 protein [Homo sapiens]
Length = 947
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 184/522 (35%), Positives = 280/522 (53%), Gaps = 38/522 (7%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 223 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 265
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK+ + + T++ V RID W S +P H + V GR G++
Sbjct: 266 RIPKIRISTQQA------------ETLQDFRVVVRIDSWESTSVYPNGHFVRVLGRIGDL 313
Query: 469 EPQINAILYENAICCSGFSPESLSCLPC----VPWEVPQEELLSRKDLR-NFCIFTIDPS 523
E +I IL EN+I FS + +P PW+V EE RKDLR + +F+IDP
Sbjct: 314 EGEIATILVENSISVIPFSEAQMCEMPVNTPESPWKVSPEEEQKRKDLRKSHLVFSIDPK 373
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
D+DD LS+ L++G +GVHIADV++FV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 374 GCEDVDDTLSVRTLNNGNLELGVHIADVTHFVAPNSYIDIEARTRATTYYLADRRYDMLP 433
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
+LS ++ SL GVDR A SI W+L+ A ++ W GRT+IRS KL YE AQ+++DG
Sbjct: 434 SVLSADLCSLLGGVDRYAVSIMWELDKASYEIKKVWYGRTIIRSAYKLFYEAAQELLDGN 493
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
V + + Q + ++V +I L ++++ ++ KR GAL LE +
Sbjct: 494 LSVVDDIPEFKDLDEKSRQAKLEELVWAIGKLTDIARHVRAKRDGCGALELEGVEVCVQL 553
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
D+ +D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 554 DDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 613
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
G +DT S+ SL+ A + D ++ +L + AT+ M A YF +G
Sbjct: 614 RECAKAKGFFIDTRSNKTLADSLDNAND--PHDPIVNRLLRSMATQAMSNALYFSTGSCA 671
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ +K
Sbjct: 672 EE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDK 712
Score = 45.4 bits (106), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 94 MPTMHINEEESA--ESGSTQSQLLLATDLCGSIISRSCPEPIANDSSCWA-YTNKDDNPS 150
MP + + E+E A + GS + + T + + P+ A C + ++ + +
Sbjct: 51 MPIVMVTEDEEAIQQYGSETEGVFVIT--FKNYLDNFWPDLKAAHELCDSILQSRREREN 108
Query: 151 HQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHN-RLEAYCKIEGVQT------- 202
E+ K + H +E + ++ G + + VN H ++EA+ +++G +
Sbjct: 109 ESQESHGKEYPEHLPLEVLEAGIKSGRYIQGILNVNKHRAQIEAFVRLQGASSKDSDLVS 168
Query: 203 DVLITGIAAQNRAVEGDFVLIKV 225
D+LI G+ A+NR++ GD V++++
Sbjct: 169 DILIHGMKARNRSIHGDVVVVEL 191
>gi|308811761|ref|XP_003083188.1| Exosomal 3'-5' exoribonuclease complex, subunit Rrp44/Dis3 (ISS)
[Ostreococcus tauri]
gi|116055067|emb|CAL57463.1| Exosomal 3'-5' exoribonuclease complex, subunit Rrp44/Dis3 (ISS)
[Ostreococcus tauri]
Length = 1157
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 192/546 (35%), Positives = 275/546 (50%), Gaps = 71/546 (13%)
Query: 443 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP--CVPWE 500
R+D W E +P H++ V G G+V+ ++ A+L + I F +L+ LP W
Sbjct: 118 RVDRWRENQRYPNGHLIRVLGDVGDVDGEMAALLARHEIPAEPFGARALAELPREGTNWV 177
Query: 501 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSI------ERLSDGIS-RVGVHIADVSY 553
VP+EEL +R+DLR+ +IDP TD+DDALS+ ER ++G + +GVHIADVSY
Sbjct: 178 VPREELETRRDLRHHRACSIDPPGCTDVDDALSVRAVPQSERGANGGAFEIGVHIADVSY 237
Query: 554 FVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGD 613
FV PGT LD EAQ R T+VY++ R++ MLP LLSE + SL DRLA S W L+ D
Sbjct: 238 FVQPGTTLDHEAQTRGTTVYLVDRRLDMLPSLLSENLASLLEKRDRLAMSCVWTLDENLD 297
Query: 614 VVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKS 673
VVD W GRTVI S +++Y AQ I DGK +T+ E G+ + + V +K+
Sbjct: 298 VVDVWFGRTVIHSRHQMTYYQAQAIYDGKPPPVDGSTVFE------GEDDIAVVREDLKT 351
Query: 674 LYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANK 732
L + R GA+ LE+++ F D + +P + + + + E M+LAN
Sbjct: 352 LVAFANKTNAIRVAHGAVELESAELRFETDAQTKSPTEVIQKSEVPMMRVVAELMILANS 411
Query: 733 TAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKL 792
AA FP ALLRRH P E + G++LD SS + SL AR
Sbjct: 412 AAARATHSVFPSCALLRRHAPPRQDGFAELSRLAATKGVKLDCSSGEALNASL--ARIAN 469
Query: 793 KDDYVLFDILINYATRPMQLASYFCSGDFK-DDTDWGHYALAFPVYTHFTSPLRRYPDLV 851
+ D + + ATR M A Y SG ++ +GHY LA YTHFTSP+RRY D+V
Sbjct: 470 ECDPEVTTLFKGLATRAMSEAQYVSSGSISATESSFGHYGLALTYYTHFTSPIRRYADIV 529
Query: 852 VHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAAL 911
VHR L AA+EA ++ +K A E A
Sbjct: 530 VHRQLIAAVEATEM---------------------------EKKATED----------AT 552
Query: 912 KYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKK---------EVLFSCLI 962
+ G L ++A H N+R A + + C ++Y+ LL++ E+ L+
Sbjct: 553 RRG------LDSLAEHLNERNRASKRAQSRCGEIYLLWLLRENPMIEPAVVHEIRDDGLM 606
Query: 963 LYLTSF 968
++L SF
Sbjct: 607 VFLPSF 612
>gi|354493394|ref|XP_003508827.1| PREDICTED: DIS3-like exonuclease 1-like [Cricetulus griseus]
Length = 1054
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 183/522 (35%), Positives = 284/522 (54%), Gaps = 38/522 (7%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 330 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 372
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK I+ ++ +A + +V RID W S +P H + V GR G++
Sbjct: 373 RIPK-----------IRISTQQAEALQDFRVVV-RIDSWETTSVYPNGHFVRVLGRIGDL 420
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLRN-FCIFTIDPS 523
E +I IL EN+I FS + +P PW+V +E RKDLRN +F+IDP
Sbjct: 421 EGEIATILVENSISVVPFSEAQMCEMPVNTPENPWKVSPKEERERKDLRNTHLVFSIDPK 480
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
D+DD LS+ L++G +GVHIADV++FV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 481 GCEDVDDTLSVRTLNNGNLELGVHIADVTHFVAPNSYIDIEARTRATTYYLADRRYDMLP 540
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLN-SAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
+LS ++ SL GVDR A S+ W+L+ ++ ++ W GRT+IRS KL YE AQ+++DG
Sbjct: 541 SILSADLCSLLGGVDRYAVSVMWELDKTSYEIKKVWYGRTIIRSAYKLFYEAAQELLDGN 600
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
F + + + Q + ++V +I L ++++ ++ KR GAL LE +
Sbjct: 601 FSIVDDIPEFKALEEQSRQAKLEELVWAIGKLTDIARHIRAKRDRCGALELEGVEVRVQL 660
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
D+ +D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 661 DDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 720
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
G +DT S+ SL+ A + D ++ +L + AT+ M A YF +G
Sbjct: 721 RECAKAKGFFIDTRSNKTLADSLDSAND--PSDPMVNKLLRSMATQAMSNALYFSTGSCA 778
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ +K
Sbjct: 779 EE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDK 819
Score = 45.1 bits (105), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 47/90 (52%), Gaps = 8/90 (8%)
Query: 144 NKDDNPSHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHN-RLEAYCKIEGVQT 202
++ + S E K + H +E + ++ G + + VN H ++EA+ +++G +
Sbjct: 209 SRRERESESQETHGKEYPEHLPLEVLEAGIKSGRYIQGILNVNKHRAQIEAFVRLQGASS 268
Query: 203 -------DVLITGIAAQNRAVEGDFVLIKV 225
D+LI G A+NR++ GD V++++
Sbjct: 269 KDSDLLSDILIHGTKARNRSIHGDVVVVEL 298
>gi|431906892|gb|ELK11012.1| Exosome complex exonuclease RRP44 [Pteropus alecto]
Length = 947
Score = 284 bits (727), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 187/538 (34%), Positives = 274/538 (50%), Gaps = 66/538 (12%)
Query: 335 ERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSL 393
ER+ + + +PTGRVV II+R+ W Y G S+ D K++R L
Sbjct: 313 ERILKTVVNEKMLKPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL 358
Query: 394 SVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESP 452
TP + P++ R+E A T+E + + ID W S
Sbjct: 359 ---------FTPADKRIPRI-------------RIETRQASTLEGQRIIVAIDGWPRNSR 396
Query: 453 FPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDL 512
+P H + G G+ E + +L E+ + FS LS LP +PW + ++++ +R+DL
Sbjct: 397 YPNGHFVKNLGEVGDKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDL 456
Query: 513 RNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSV 572
R+ C+ ++DP TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+V
Sbjct: 457 RHLCVCSVDPPGCTDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTV 516
Query: 573 YMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSY 632
Y+ +++I M+P LLS + SL VDRLAFS W++N +++ ++ I S L+Y
Sbjct: 517 YLCEKRIDMVPELLSSNLCSLRCNVDRLAFSCIWEMNHNAEILKTRFTKSAINSKASLTY 576
Query: 633 EHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALR 692
AQ + D S N D+ S++ L +++KILK +R GAL
Sbjct: 577 AEAQ----MRIDSASMN---------------DDITVSLRGLNKLAKILKKRRIEKGALT 617
Query: 693 LENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH 751
L + + F D E P D + N + EEFMLLAN + A+ I F + ALLR+H
Sbjct: 618 LSSPEVRFHMDSETHDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKH 677
Query: 752 PAP---NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATR 808
PAP N L + +++ T ++ SL++A L +L ATR
Sbjct: 678 PAPPPSNYEILVKAAKSKLAISVEIKTDTAKSLADSLDRA--DCPTFPYLNTLLRILATR 735
Query: 809 PMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
M A YFCSG D D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 736 CMMQAVYFCSG---MDNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTY 790
>gi|426379458|ref|XP_004056414.1| PREDICTED: DIS3-like exonuclease 1 [Gorilla gorilla gorilla]
Length = 971
Score = 284 bits (727), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 184/522 (35%), Positives = 280/522 (53%), Gaps = 38/522 (7%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 247 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 289
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK+ + + T++ V RID W S +P H + V GR G++
Sbjct: 290 RIPKIRISTQQA------------ETLQDFRVVVRIDSWESTSVYPNGHFVRVLGRIGDL 337
Query: 469 EPQINAILYENAICCSGFSPESLSCLPC----VPWEVPQEELLSRKDLR-NFCIFTIDPS 523
E +I IL EN+I FS + +P PW+V EE RKDLR + +F+IDP
Sbjct: 338 EGEIATILVENSISVIPFSEAQMCEMPVNTPESPWKVSPEEEQKRKDLRKSHLVFSIDPK 397
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
D+DD LS+ L++G +GVHIADV++FV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 398 GCEDVDDTLSVRTLNNGNLELGVHIADVTHFVAPNSYIDIEARTRATTYYLADRRYDMLP 457
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
+LS ++ SL GVDR A SI W+L+ A ++ W GRT+IRS KL YE AQ+++DG
Sbjct: 458 SVLSADLCSLLGGVDRYAVSIMWELDKASYEIKKVWYGRTIIRSAYKLFYEAAQELLDGN 517
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
V + + Q + ++V +I L ++++ ++ KR GAL LE +
Sbjct: 518 LSVVDDIPEFKDLDEKSRQAKLEELVWAIGKLTDIARHVRAKRDGCGALELEGVEVCVQL 577
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
D+ +D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 578 DDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 637
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
G +DT S+ SL+ A + D ++ +L + AT+ M A YF +G
Sbjct: 638 RECAKAKGFFIDTRSNKTLADSLDNAND--PHDPIVNRLLRSMATQAMSNALYFSTGSCA 695
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ +K
Sbjct: 696 EE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDK 736
Score = 45.4 bits (106), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 94 MPTMHINEEESA--ESGSTQSQLLLATDLCGSIISRSCPEPIANDSSCWA-YTNKDDNPS 150
MP + + E+E A + GS + + T + + P+ A C + ++ + +
Sbjct: 75 MPIVMVTEDEEAIQQYGSETEGVFVIT--FKNYLDNFWPDLKAAHELCDSILQSRREREN 132
Query: 151 HQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHN-RLEAYCKIEGVQT------- 202
E+ K + H +E + ++ G + + VN H ++EA+ +++G +
Sbjct: 133 ESQESHGKEYPEHLPLEVLEAGIKSGRYIQGILNVNKHRAQIEAFVRLQGASSKDSDLVS 192
Query: 203 DVLITGIAAQNRAVEGDFVLIKV 225
D+LI G+ A+NR++ GD V++++
Sbjct: 193 DILIHGMKARNRSIHGDVVVVEL 215
>gi|148229076|ref|NP_001088180.1| DIS3 mitotic control homolog [Xenopus laevis]
gi|54035109|gb|AAH84092.1| LOC495005 protein [Xenopus laevis]
Length = 953
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 181/545 (33%), Positives = 280/545 (51%), Gaps = 65/545 (11%)
Query: 327 QNDGMNAIERLSAMISSY--PTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SR 383
+ND + ++E M++S K+P+G+VV II+R+ W Y G S+
Sbjct: 312 ENDDIESVEEKEKMLTSAVNSAKKPSGKVVGIIKRN--------------WRPYCGMLSK 357
Query: 384 KDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAAR 443
K++ L TP + P++ + + +T+E + +
Sbjct: 358 SQIKESTRHL---------FTPAERRIPRIRIETRQ------------SSTLEGQRIIVA 396
Query: 444 IDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQ 503
+D W + S +P H + G G+ + +L E+ + FS LS LP +PW +
Sbjct: 397 VDGWPKNSRYPNGHFVKSLGTAGDKATETEVLLLEHDVPHQPFSQTVLSFLPKMPWNITP 456
Query: 504 EELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDI 563
E++ +R DLR+ + ++DP TD+DDAL L +G VGVHIADVS+F+ PG ALD
Sbjct: 457 EDMKNRIDLRHLYVCSVDPPGCTDIDDALHCRELENGTLEVGVHIADVSHFIRPGNALDQ 516
Query: 564 EAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTV 623
EA R T+VY+ ++I M+P LLS + SL VDRLAFS W+++ +++ ++V
Sbjct: 517 EAANRGTTVYLCDKRIDMVPELLSSNLCSLRSNVDRLAFSCIWEMDENANILKTKFTKSV 576
Query: 624 IRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKD 683
I S L+Y AQ ID S T+ + ++ +S++ L +++KILK
Sbjct: 577 INSKASLTYAEAQMRID-------SPTMND------------EITQSLRFLNKLAKILKK 617
Query: 684 KRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAF 742
+R +GAL L + + F D E P D ++ N + EEFMLLAN + A+ I F
Sbjct: 618 QRINNGALTLSSPEVRFHMDSETHDPIDLQTKELKETNSMVEEFMLLANISVAQKIFDEF 677
Query: 743 PDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDIL 802
+ ALLR+HP+P L++ T + SL++A + ++ + L
Sbjct: 678 SEYALLRKHPSPPPANYDILVKAAQSKNLEIKTDCAKALADSLDKAESQ---EFPYLNTL 734
Query: 803 IN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 861
+ ATR M A YFCSG DTD+ HY LA P+YTHFTSP+RRY D++VHR L A+
Sbjct: 735 LRILATRCMMQAVYFCSG---MDTDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAVG 791
Query: 862 AEKLY 866
A+ Y
Sbjct: 792 ADCTY 796
>gi|119598166|gb|EAW77760.1| hypothetical protein MGC4562, isoform CRA_c [Homo sapiens]
Length = 928
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 184/522 (35%), Positives = 280/522 (53%), Gaps = 38/522 (7%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 204 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 246
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK+ + + T++ V RID W S +P H + V GR G++
Sbjct: 247 RIPKIRISTQQA------------ETLQDFRVVVRIDSWESTSVYPNGHFVRVLGRIGDL 294
Query: 469 EPQINAILYENAICCSGFSPESLSCLPC----VPWEVPQEELLSRKDLR-NFCIFTIDPS 523
E +I IL EN+I FS + +P PW+V EE RKDLR + +F+IDP
Sbjct: 295 EGEIATILVENSISVIPFSEAQMCEMPVNTPESPWKVSPEEEQKRKDLRKSHLVFSIDPK 354
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
D+DD LS+ L++G +GVHIADV++FV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 355 GCEDVDDTLSVRTLNNGNLELGVHIADVTHFVAPNSYIDIEARTRATTYYLADRRYDMLP 414
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
+LS ++ SL GVDR A SI W+L+ A ++ W GRT+IRS KL YE AQ+++DG
Sbjct: 415 SVLSADLCSLLGGVDRYAVSIMWELDKASYEIKKVWYGRTIIRSAYKLFYEAAQELLDGN 474
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
V + + Q + ++V +I L ++++ ++ KR GAL LE +
Sbjct: 475 LSVVDDIPEFKDLDEKSRQAKLEELVWAIGKLTDIARHVRAKRDGCGALELEGVEVCVQL 534
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
D+ +D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 535 DDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 594
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
G +DT S+ SL+ A + D ++ +L + AT+ M A YF +G
Sbjct: 595 RECAKAKGFFIDTRSNKTLADSLDNAND--PHDPIVNRLLRSMATQAMSNALYFSTGSCA 652
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ +K
Sbjct: 653 EE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDK 693
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 94 MPTMHINEEESA--ESGSTQSQLLLATDLCGSIISRSCPEPIANDSSCWA-YTNKDDNPS 150
MP + + E+E A + GS + + T + + P+ A C + ++ + +
Sbjct: 32 MPIVMVTEDEEAIQQYGSETEGVFVIT--FKNYLDNFWPDLKAAHELCDSILQSRREREN 89
Query: 151 HQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHN-RLEAYCKIEGVQT------- 202
E+ K + H +E + ++ G + + VN H ++EA+ +++G +
Sbjct: 90 ESQESHGKEYPEHLPLEVLEAGIKSGRYIQGILNVNKHRAQIEAFVRLQGASSKDSDLVS 149
Query: 203 DVLITGIAAQNRAVEGDFVLIKV 225
D+LI G+ A+NR++ GD V++++
Sbjct: 150 DILIHGMKARNRSIHGDVVVVEL 172
>gi|118084745|ref|XP_417016.2| PREDICTED: exosome complex exonuclease RRP44 [Gallus gallus]
Length = 963
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 196/592 (33%), Positives = 291/592 (49%), Gaps = 86/592 (14%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 407
RPTG+VV II+R+ R G L S+ K+ R L +P I
Sbjct: 343 RPTGKVVGIIKRNWR--PFCGML-----------SKSQIKEARRHLFIPADRSI------ 383
Query: 408 PKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 466
P++ R+E A +E + + ID W S +P H + G G
Sbjct: 384 ---PRI-------------RIETRQADKLEGQRIIVAIDGWPRNSRYPNGHFVKNLGSAG 427
Query: 467 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 526
+ E + +L E+ + FS LS LP +PW + ++++ R+DLR+ + ++DP T
Sbjct: 428 DKETETEVLLLEHDVPHQPFSQNVLSFLPKMPWSITEKDMKYREDLRHLYVCSVDPPGCT 487
Query: 527 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 586
D+DDAL + +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P LL
Sbjct: 488 DIDDALHCREIENGNLEVGVHIADVSHFIRPGNALDEESARRGTTVYLCEKRIDMVPELL 547
Query: 587 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 646
S + SL VDRLAFS W++N +++ +++I S L+Y AQ ID
Sbjct: 548 SSNLCSLRSNVDRLAFSCIWEMNQKAEILKTRFTKSIINSKASLTYAEAQMRID------ 601
Query: 647 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EY 705
S + + D+ S++ L +++KILK KR +GAL L + + F D E
Sbjct: 602 -SAAMND------------DITVSLRGLNKLAKILKKKRIDNGALTLSSPEVRFHMDSET 648
Query: 706 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAF 765
P D + N + EEFMLLAN + A+ I FP+ ALLR+HPAP
Sbjct: 649 HDPIDLQTKELRETNSMVEEFMLLANVSVAQKIYDEFPEFALLRKHPAPPPSNYDILVKA 708
Query: 766 CSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDD 824
L++ T S+ +SL++A D+ + L+ TR M A YFCSG D
Sbjct: 709 AKSKNLEIKTDSAKALAESLDKAESP---DFPYLNTLLRILTTRCMMQAVYFCSG---MD 762
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY---------------WKH 869
+D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y +
Sbjct: 763 SDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADSTYPELTDKHKLADLCKNLNY 822
Query: 870 RRMLPKNNHREGVRGRFLTGIFY------DKDAAESLEGREALSVAALKYGV 915
R + + R V F T +F+ ++DA R A+ V KYG+
Sbjct: 823 RHKMAQYAQRASV--AFHTQLFFKTKGVVNEDAYILFVRRNAVVVLIPKYGL 872
>gi|19115966|ref|NP_588616.1| DIS3-like exonuclease 1 isoform 2 [Homo sapiens]
gi|18314381|gb|AAH22089.1| DIS3 mitotic control homolog (S. cerevisiae)-like [Homo sapiens]
gi|119598165|gb|EAW77759.1| hypothetical protein MGC4562, isoform CRA_b [Homo sapiens]
gi|123993589|gb|ABM84396.1| hypothetical protein MGC4562 [synthetic construct]
gi|157928542|gb|ABW03567.1| DIS3 mitotic control homolog (S. cerevisiae)-like [synthetic
construct]
Length = 971
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 184/522 (35%), Positives = 280/522 (53%), Gaps = 38/522 (7%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 247 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 289
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK+ + + T++ V RID W S +P H + V GR G++
Sbjct: 290 RIPKIRISTQQA------------ETLQDFRVVVRIDSWESTSVYPNGHFVRVLGRIGDL 337
Query: 469 EPQINAILYENAICCSGFSPESLSCLPC----VPWEVPQEELLSRKDLR-NFCIFTIDPS 523
E +I IL EN+I FS + +P PW+V EE RKDLR + +F+IDP
Sbjct: 338 EGEIATILVENSISVIPFSEAQMCEMPVNTPESPWKVSPEEEQKRKDLRKSHLVFSIDPK 397
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
D+DD LS+ L++G +GVHIADV++FV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 398 GCEDVDDTLSVRTLNNGNLELGVHIADVTHFVAPNSYIDIEARTRATTYYLADRRYDMLP 457
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
+LS ++ SL GVDR A SI W+L+ A ++ W GRT+IRS KL YE AQ+++DG
Sbjct: 458 SVLSADLCSLLGGVDRYAVSIMWELDKASYEIKKVWYGRTIIRSAYKLFYEAAQELLDGN 517
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
V + + Q + ++V +I L ++++ ++ KR GAL LE +
Sbjct: 518 LSVVDDIPEFKDLDEKSRQAKLEELVWAIGKLTDIARHVRAKRDGCGALELEGVEVCVQL 577
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
D+ +D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 578 DDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 637
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
G +DT S+ SL+ A + D ++ +L + AT+ M A YF +G
Sbjct: 638 RECAKAKGFFIDTRSNKTLADSLDNAND--PHDPIVNRLLRSMATQAMSNALYFSTGSCA 695
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ +K
Sbjct: 696 EE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDK 736
Score = 45.4 bits (106), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 94 MPTMHINEEESA--ESGSTQSQLLLATDLCGSIISRSCPEPIANDSSCWA-YTNKDDNPS 150
MP + + E+E A + GS + + T + + P+ A C + ++ + +
Sbjct: 75 MPIVMVTEDEEAIQQYGSETEGVFVIT--FKNYLDNFWPDLKAAHELCDSILQSRREREN 132
Query: 151 HQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHN-RLEAYCKIEGVQT------- 202
E+ K + H +E + ++ G + + VN H ++EA+ +++G +
Sbjct: 133 ESQESHGKEYPEHLPLEVLEAGIKSGRYIQGILNVNKHRAQIEAFVRLQGASSKDSDLVS 192
Query: 203 DVLITGIAAQNRAVEGDFVLIKV 225
D+LI G+ A+NR++ GD V++++
Sbjct: 193 DILIHGMKARNRSIHGDVVVVEL 215
>gi|195504840|ref|XP_002099251.1| GE23472 [Drosophila yakuba]
gi|194185352|gb|EDW98963.1| GE23472 [Drosophila yakuba]
Length = 982
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 183/546 (33%), Positives = 276/546 (50%), Gaps = 60/546 (10%)
Query: 323 SSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGS 382
S + D + ++++ A SS + PTGR+V I+ R +W Y G
Sbjct: 323 SEERAEDEKDMLKQVRAAASS-AERTPTGRIVGIVRR--------------KWRQYCGIL 367
Query: 383 RKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAA 442
+ + D P K P++ + + A ++ + +
Sbjct: 368 QPSL--------IEDTTRHIFVPADRKIPRIRIETRQA------------AKLQNQRIIV 407
Query: 443 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVP 502
ID W S +P H + G G++ + IL E+ + FS E LS LP +PW +
Sbjct: 408 TIDTWPRNSRYPHGHFVRSLGPLGDMATENEVILLEHDVPHCKFSDEVLSFLPQMPWTIT 467
Query: 503 QEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALD 562
+E+ R DLR+ I ++DP TD+DDAL L +G VGVHIADVS+F+ PG ALD
Sbjct: 468 EEDYAKRVDLRDLYICSVDPPGCTDIDDALHCRELPNGNLEVGVHIADVSHFIRPGNALD 527
Query: 563 IEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRT 622
EA R T+VY++ ++I M+P LLS + SL GV+R AFS W++++ +V+ + ++
Sbjct: 528 KEAAARGTTVYLVGKRIDMVPELLSSNLCSLVGGVERFAFSCVWEVDNEANVLSKRFHKS 587
Query: 623 VIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILK 682
VI+S ++YE AQ IID D N ++ +S+++L ++KILK
Sbjct: 588 VIKSKRAMTYEEAQVIID---DATQQN----------------EIAKSLRNLNRLAKILK 628
Query: 683 DKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARA 741
+R GAL L + + F D E P + + + N + EEFMLLAN T AE IA
Sbjct: 629 KRRMDSGALVLASPEIRFQVDSETHEPLEVEVKQMRETNSMVEEFMLLANITVAEHIATE 688
Query: 742 FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDI 801
F + A+LRRHP P G Q+D S + SL++ +K D F+
Sbjct: 689 FSECAVLRRHPRPPPTNFDPLVKAARYQGFQVDIDSGLELSHSLDKC---VKADNPYFNT 745
Query: 802 LIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
+I TR M A YF SG + + ++ HY LA P+YTHFTSP+RRY D++VHR L A++
Sbjct: 746 MIRILTTRCMMQAVYFISGSLQKE-EFFHYGLAAPIYTHFTSPIRRYSDIMVHRLLAASI 804
Query: 861 EAEKLY 866
A+ Y
Sbjct: 805 GADSTY 810
Score = 48.5 bits (114), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 66/140 (47%), Gaps = 9/140 (6%)
Query: 102 EESAESGSTQSQLLLATDLCGS--------IISRSCPEPIANDSSCWAYTNKDDNPSHQS 153
+E SG ++++L TD G+ I+ S E + + +K + + ++
Sbjct: 165 KEFERSGRAATRVILLTDDAGNRAKAEAEGILVTSAAEYVKSLEDFPLLIDKLSHKTFEN 224
Query: 154 EAR-CKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQ 212
E + + PH SM+ + E L + + ++ + N LE +E + +LI G A
Sbjct: 225 EKKGLPQYPPHLSMKELLEGLRQNKLLQGAFQASRENYLEGSVSVEKFEKGILIQGREAL 284
Query: 213 NRAVEGDFVLIKVDRLSLWA 232
NRAV+GD V +++ + W+
Sbjct: 285 NRAVDGDLVAVELLPEAEWS 304
>gi|119598167|gb|EAW77761.1| hypothetical protein MGC4562, isoform CRA_d [Homo sapiens]
Length = 920
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 184/522 (35%), Positives = 280/522 (53%), Gaps = 38/522 (7%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 196 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 238
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK+ + + T++ V RID W S +P H + V GR G++
Sbjct: 239 RIPKIRISTQQA------------ETLQDFRVVVRIDSWESTSVYPNGHFVRVLGRIGDL 286
Query: 469 EPQINAILYENAICCSGFSPESLSCLPC----VPWEVPQEELLSRKDLR-NFCIFTIDPS 523
E +I IL EN+I FS + +P PW+V EE RKDLR + +F+IDP
Sbjct: 287 EGEIATILVENSISVIPFSEAQMCEMPVNTPESPWKVSPEEEQKRKDLRKSHLVFSIDPK 346
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
D+DD LS+ L++G +GVHIADV++FV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 347 GCEDVDDTLSVRTLNNGNLELGVHIADVTHFVAPNSYIDIEARTRATTYYLADRRYDMLP 406
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
+LS ++ SL GVDR A SI W+L+ A ++ W GRT+IRS KL YE AQ+++DG
Sbjct: 407 SVLSADLCSLLGGVDRYAVSIMWELDKASYEIKKVWYGRTIIRSAYKLFYEAAQELLDGN 466
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
V + + Q + ++V +I L ++++ ++ KR GAL LE +
Sbjct: 467 LSVVDDIPEFKDLDEKSRQAKLEELVWAIGKLTDIARHVRAKRDGCGALELEGVEVCVQL 526
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
D+ +D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 527 DDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 586
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
G +DT S+ SL+ A + D ++ +L + AT+ M A YF +G
Sbjct: 587 RECAKAKGFFIDTRSNKTLADSLDNAND--PHDPIVNRLLRSMATQAMSNALYFSTGSCA 644
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ +K
Sbjct: 645 EE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDK 685
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 94 MPTMHINEEESA--ESGSTQSQLLLATDLCGSIISRSCPEPIANDSSCWA-YTNKDDNPS 150
MP + + E+E A + GS + + T + + P+ A C + ++ + +
Sbjct: 24 MPIVMVTEDEEAIQQYGSETEGVFVIT--FKNYLDNFWPDLKAAHELCDSILQSRREREN 81
Query: 151 HQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHN-RLEAYCKIEGVQT------- 202
E+ K + H +E + ++ G + + VN H ++EA+ +++G +
Sbjct: 82 ESQESHGKEYPEHLPLEVLEAGIKSGRYIQGILNVNKHRAQIEAFVRLQGASSKDSDLVS 141
Query: 203 DVLITGIAAQNRAVEGDFVLIKV 225
D+LI G+ A+NR++ GD V++++
Sbjct: 142 DILIHGMKARNRSIHGDVVVVEL 164
>gi|194747391|ref|XP_001956135.1| GF24745 [Drosophila ananassae]
gi|190623417|gb|EDV38941.1| GF24745 [Drosophila ananassae]
Length = 1159
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 160/414 (38%), Positives = 235/414 (56%), Gaps = 17/414 (4%)
Query: 456 AHVLHVFGRGGEVEPQINAILYENAICCSGFSP-----ESLSCLPCVPWEVPQEELLSRK 510
A ++ GR G +E ++ AIL+ N + P + P P V E+L +R+
Sbjct: 569 AELIQPVGRVGNLEDELKAILFHNGL--RDIKPFEQRFNDMYSEPAPP--VGAEDLRNRR 624
Query: 511 DLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRST 570
DLR CIFTIDP TA DLDDA+S+E+L D + VGVHI+DVS+F+ LD + RST
Sbjct: 625 DLRKKCIFTIDPLTARDLDDAVSVEQLGDNVFEVGVHISDVSHFLSEACELDEIVKERST 684
Query: 571 SVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW--IGRTVIRSCC 628
S+Y++ I MLP + SL PG D+ AFS+FW +N G ++ RTVI SC
Sbjct: 685 SIYLVNEVIHMLPQTMCMRC-SLLPGEDKFAFSVFWKMNDQGVMLQEKPEFARTVINSCT 743
Query: 629 KLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTD 688
+ +YEHAQ IID + + + +P + F+ D+ + L+ +++ ++ RF +
Sbjct: 744 QFAYEHAQKIIDNPRERFTE----DDFPTIVNGFQPDDIAERVLLLHGMARSMRKARFDN 799
Query: 689 GALRLENSKPVFLFDEY-GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSAL 747
G+L + N+K F+ D G P + + + N + EEFMLLAN+ A I +FPD A+
Sbjct: 800 GSLTINNAKLRFVLDPISGEPQCFEVEQQREANRMIEEFMLLANQAVARFIHDSFPDIAV 859
Query: 748 LRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYAT 807
LR HP P + L+ + GL+LD SSS +S+ + + D + L
Sbjct: 860 LRNHPPPLTKSLKSLKEKLLAQGLELDYSSSKALQESMVRLCREASDPVAMSACLSQLLM 919
Query: 808 RPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 861
+PM A+YFCS + +D HYAL+ P+YTHFTSP+RRYPD++VHR L AAL+
Sbjct: 920 KPMARATYFCSEGKSEPSDLWHYALSIPIYTHFTSPIRRYPDIMVHRLLAAALK 973
>gi|281351838|gb|EFB27422.1| hypothetical protein PANDA_002303 [Ailuropoda melanoleuca]
Length = 935
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 184/536 (34%), Positives = 272/536 (50%), Gaps = 65/536 (12%)
Query: 335 ERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSL 393
ER+ ++ +PTGRVV II+R+ W Y G S+ D K++R L
Sbjct: 330 ERILNTAANEKMLKPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL 375
Query: 394 SVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDAT-IEMELVAARIDEWNEESP 452
TP + P++ R+E A+ +E + ID W S
Sbjct: 376 ---------FTPADRRIPRI-------------RIETRQASALEGRRIIVAIDGWPRNSR 413
Query: 453 FPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDL 512
+P H + G G+ E + +L E+ + FS LS LP +PW + ++++ +R+DL
Sbjct: 414 YPNGHFVKNLGDVGDKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDL 473
Query: 513 RNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSV 572
R+ C+ ++DP TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+V
Sbjct: 474 RHLCVCSVDPPGCTDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTV 533
Query: 573 YMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSY 632
Y+ +++I M+P LLS + SL VDRLAFS W++N +++ ++ I S L+Y
Sbjct: 534 YLCEKRIDMVPELLSSNLCSLRCNVDRLAFSCIWEMNHNAEILKVRFTKSAINSKASLTY 593
Query: 633 EHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALR 692
AQ ID S + + D+ S++ L +++KILK +R GAL
Sbjct: 594 AEAQMRID-------SAAMND------------DITTSLRGLNKLAKILKKRRIEKGALT 634
Query: 693 LENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH 751
L + + F D E P D + N + EEFMLLAN + A+ I F + ALLR+H
Sbjct: 635 LSSPEVRFHMDSETHDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKH 694
Query: 752 PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPM 810
PAP L++ T ++ SL++A + + L+ ATR M
Sbjct: 695 PAPPPSNYEILVKAAKSKNLEIKTDTAKSLADSLDRADSP---TFPYLNTLLRILATRCM 751
Query: 811 QLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
A YFCSG D D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 752 MQAVYFCSG---MDNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTY 804
>gi|261334833|emb|CBH17827.1| exosome complex exonuclease RRP44, putative [Trypanosoma brucei
gambiense DAL972]
Length = 943
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 210/654 (32%), Positives = 323/654 (49%), Gaps = 60/654 (9%)
Query: 313 PSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPT------KRPTGRVVSIIERSPRRDGI 366
P T + + N+ N L+ M+S+ PT K+P+G V++++ER
Sbjct: 165 PDGRRITRWIRDTTMNNRKNREMWLAEMMSA-PTEHNWHGKKPSGSVIAVLER------- 216
Query: 367 VGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKK 426
+ DA ++ + DR + + P + V +D+P S+++
Sbjct: 217 ------KHPLLFVARLADDALSSQEVIQ--DRRFYRFKVFDQLLPHIAVFGRDIPFSLRE 268
Query: 427 RLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGF 486
+ E + +E W ES FP A ++ FG + AI + I F
Sbjct: 269 SIRERFYLLRLETTTGGDIVW-AESRFPTARIISTFGSVHSLRANTFAICSAHHIVTDDF 327
Query: 487 SPESLSCLP---CVPWEVPQEELLSRKDLRNF-CIFTIDPSTATDLDDALSIERLSDGIS 542
S E+ +C+P +P + + + R+DLR + +IDP+TA DLDDALSI L G
Sbjct: 328 SEEACNCIPDRLIIP-NLEEMKRTGRRDLRREEFVCSIDPATARDLDDALSITLLPGGY- 385
Query: 543 RVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAF 602
RVGVHIADVS+FV PG+ALD E + R+TSVY++ R PMLP LSEE SL+PG D+LAF
Sbjct: 386 RVGVHIADVSHFVSPGSALDEEGRARATSVYLVDRVYPMLPRKLSEEYCSLHPGSDKLAF 445
Query: 603 SIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQF 662
S + L+ G + W G++VIR+ C+LSY+ AQ IIDG + G +
Sbjct: 446 SAIFQLDLNGKLKGEWFGKSVIRNRCRLSYDDAQRIIDGNLTTLDALDYGGVTDRRELSQ 505
Query: 663 EWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSV---LSGREDL 719
V S+K L++++ L+ F G L + F F++ P + + + +
Sbjct: 506 LKERVATSVKHLFDLASKLRAASFERGRLAFSTPEIGFHFEDISNPTHPIGFNVHRQIEA 565
Query: 720 NFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSG 779
N+L EEFMLLAN A+ I + PD A+LR HP P + + ++ ++L G
Sbjct: 566 NWLVEEFMLLANLRVAQKIVQYLPDQAILRVHPPPKRVPFEQLKVSLARVNIEL----KG 621
Query: 780 QFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGD-FKDDTDWGHYALAFPVYT 838
+ ++SLEQ ++ D+ L D + + LA Y +G+ F + GHYAL YT
Sbjct: 622 RSNKSLEQLLNSVR-DHPLRDEISIMVKNTLSLAKYCTNGENFTNKVPLGHYALGLEWYT 680
Query: 839 HFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAE 898
HFTSP+RRY D++VHR L ALE E + K HR G K A
Sbjct: 681 HFTSPIRRYADIIVHRQLLCALEIESIV--------KGKHRTG------------KTCAG 720
Query: 899 SLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLK 952
++ G E + + ++ +++ N+A CN+ K A +V +A +KL+ LK
Sbjct: 721 AV-GMEVECLDSAEFFTSTYEVM-NIADECNENKRAADSVSEASLKLFFCHYLK 772
>gi|67526399|ref|XP_661261.1| hypothetical protein AN3657.2 [Aspergillus nidulans FGSC A4]
gi|40740675|gb|EAA59865.1| hypothetical protein AN3657.2 [Aspergillus nidulans FGSC A4]
gi|259481809|tpe|CBF75677.1| TPA: putative TeaA receptor TeaR (Eurofung) [Aspergillus nidulans
FGSC A4]
Length = 1015
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 219/722 (30%), Positives = 328/722 (45%), Gaps = 127/722 (17%)
Query: 154 EARCKIFAP-HWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQ 212
EAR +++ P ++SM + L G+ + ++ V+ +N LE K+ ++I G
Sbjct: 233 EARGELYYPEYYSMSKIMTGLRAGNLHQGVFNVSPYNYLEGQVKVAAFDKPLIIMGRHNS 292
Query: 213 NRAVEGDFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYE 272
NRA+ GD V++++ W S ++ IV++ + N D
Sbjct: 293 NRAISGDVVVVEILPKDQWK-----SPSTKIVDEEAVTKNDNPEGED------------- 334
Query: 273 YSNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMN 332
N T+++EK A +E+ + G N+
Sbjct: 335 --NETVITEK--------ERRALQEEVRQAHGKNH------------------------- 359
Query: 333 AIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSS 392
P +PT +VV +++R+ W Y G D S
Sbjct: 360 ---------EGRP--QPTAKVVGVVKRN--------------WRQYVGTV--DPTSTGSQ 392
Query: 393 LSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESP 452
+ ++ + + P K PK+ V + + + +R + ID WN +S
Sbjct: 393 TTGRRQQNVFVLPMEKKVPKIRVRTRQATELLGQR------------ILVTIDAWNRDSR 440
Query: 453 FPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP--CVPWEVPQEE----L 506
+P H + G + A+L E + F L CLP W VP +
Sbjct: 441 YPTGHFIRSLGELETKSAETEALLLEWDVQYKPFPKAVLECLPPEGHDWRVPASKDDIGW 500
Query: 507 LSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQ 566
R+DLR+ I +IDP D+DDAL +L +G VGVHIADVS+FV P A+D+EA
Sbjct: 501 RGRRDLRDLLICSIDPPGCQDIDDALHARKLPNGNFEVGVHIADVSHFVKPNNAMDLEAS 560
Query: 567 VRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRS 626
VR T+VY++ ++I MLP LL ++ SL P V+R AFS+ W++ +VV ++VIRS
Sbjct: 561 VRGTTVYLVDKRIDMLPHLLGTDLCSLKPYVERYAFSVLWEMTPDAEVVSADFTKSVIRS 620
Query: 627 CCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRF 686
SYE AQ ID D ++ L E S+++L +SKIL+ KR
Sbjct: 621 REAFSYEQAQLRID---DPSKTDELTE----------------SMRTLLHLSKILRQKRM 661
Query: 687 TDGALRLENSKPVFLF--DEYGTPYDSVLS-GREDLNFLFEEFMLLANKTAAEVIARAFP 743
GAL L + + DE G P V + N L EEFML AN T A I FP
Sbjct: 662 DAGALNLASPEVRIEADNDEVGDPLADVKTKAMLATNSLVEEFMLHANITVAAKIYSTFP 721
Query: 744 DSALLRRHPAPNMRKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDIL 802
+A+LRRH P + E K ++LD SSS SL++ + + F+ L
Sbjct: 722 QTAMLRRHATPPPQNFEELINQLTKKRDMRLDVSSSRALADSLDRCTDA---ENPFFNTL 778
Query: 803 IN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 861
+ ATR M A YFC+G ++++ HY LA P+YTHFTSP+RRY DL+VHR L AA+
Sbjct: 779 VRILATRCMTSAEYFCAGAHA-ESEFRHYGLASPIYTHFTSPIRRYADLLVHRQLAAAIN 837
Query: 862 AE 863
E
Sbjct: 838 YE 839
>gi|18398450|ref|NP_565418.1| exosome complex exonuclease DIS3/RRP44 [Arabidopsis thaliana]
gi|15982745|gb|AAL09713.1| At2g17510/MJB20.7 [Arabidopsis thaliana]
gi|19699186|gb|AAL90959.1| At2g17510/MJB20.7 [Arabidopsis thaliana]
gi|20198264|gb|AAD32908.2| putative mitotic control protein dis3 [Arabidopsis thaliana]
gi|330251544|gb|AEC06638.1| exosome complex exonuclease DIS3/RRP44 [Arabidopsis thaliana]
Length = 933
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 183/526 (34%), Positives = 275/526 (52%), Gaps = 66/526 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVP----DREYIQL 403
RP+GRVV +I R+ W +Y G + +S+P +
Sbjct: 336 RPSGRVVGVIRRN--------------WHSYCG--------SLEPMSLPAGSGGTAHALF 373
Query: 404 TPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG 463
+ PK+ + + L + ++M +V A +D W+ +S +P H + G
Sbjct: 374 VSKDRRIPKIRINTRQLQN-----------LLDMRIVVA-VDSWDRQSRYPSGHYVRPIG 421
Query: 464 RGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLS--RKDLRNFCIFTID 521
+ G+ E + +L EN + S FS + L+CLP +PW V E++ + R+DLR+ +F++D
Sbjct: 422 KIGDKETETEVVLIENDVDYSPFSSQVLACLPPLPWSVSSEDVSNPVRQDLRHLLVFSVD 481
Query: 522 PSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPM 581
P D+DDAL L +G +GVHIADV+ FV PGT LD EA R TSVY+++R+I M
Sbjct: 482 PPGCKDIDDALHCTSLPNGNFELGVHIADVTNFVHPGTPLDDEASKRGTSVYLVERRIDM 541
Query: 582 LPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDG 641
LP L+E++ SL V+RLAFS+ W+++ +++ +++I+S LSY AQ +D
Sbjct: 542 LPKPLTEDICSLRADVERLAFSVIWEMSPDAEIISTRFTKSIIKSSAALSYIEAQARMDD 601
Query: 642 KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFL 701
+S T ++++ ++KI++ +R GAL L +++ F
Sbjct: 602 SRLTDSLTT-------------------DLRNMNTLAKIMRQRRIDRGALTLASAEVKFD 642
Query: 702 FD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLR 760
D E P + + + N + EEFML AN + A I + FP +LLRRHP P L
Sbjct: 643 IDPENHDPLNIGMYQILEANQMVEEFMLAANVSVAGQILKLFPSCSLLRRHPTPTREMLE 702
Query: 761 EFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSG 819
+ GL LD SSS SL++A +D Y F+ LI ATR M A YFCSG
Sbjct: 703 PLLRTAAAIGLTLDVSSSKALADSLDRAVG--EDPY--FNKLIRILATRCMTQAVYFCSG 758
Query: 820 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 865
D ++ HY LA P+YTHFTSP+RRY D+ VHR L A+L KL
Sbjct: 759 DLS-PPEYHHYGLAAPLYTHFTSPIRRYADVFVHRLLAASLGIYKL 803
Score = 46.6 bits (109), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 4/100 (4%)
Query: 143 TNKD----DNPSHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIE 198
TN+D D + R I+ H M + L +G + RVN N EAY E
Sbjct: 195 TNEDITMEDADDSRPSKRKLIYQEHKPMSEITAGLHRGIYHQGKLRVNRFNPYEAYVGSE 254
Query: 199 GVQTDVLITGIAAQNRAVEGDFVLIKVDRLSLWAKMKGFS 238
+ +++I G + NRA +GD V +++ W K S
Sbjct: 255 SIGEEIIIYGRSNMNRAFDGDIVAVELLPRDQWQDEKALS 294
>gi|301757139|ref|XP_002914417.1| PREDICTED: exosome complex exonuclease RRP44-like isoform 1
[Ailuropoda melanoleuca]
Length = 958
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 184/536 (34%), Positives = 272/536 (50%), Gaps = 65/536 (12%)
Query: 335 ERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSL 393
ER+ ++ +PTGRVV II+R+ W Y G S+ D K++R L
Sbjct: 327 ERILNTAANEKMLKPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL 372
Query: 394 SVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDAT-IEMELVAARIDEWNEESP 452
TP + P++ R+E A+ +E + ID W S
Sbjct: 373 ---------FTPADRRIPRI-------------RIETRQASALEGRRIIVAIDGWPRNSR 410
Query: 453 FPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDL 512
+P H + G G+ E + +L E+ + FS LS LP +PW + ++++ +R+DL
Sbjct: 411 YPNGHFVKNLGDVGDKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDL 470
Query: 513 RNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSV 572
R+ C+ ++DP TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+V
Sbjct: 471 RHLCVCSVDPPGCTDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTV 530
Query: 573 YMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSY 632
Y+ +++I M+P LLS + SL VDRLAFS W++N +++ ++ I S L+Y
Sbjct: 531 YLCEKRIDMVPELLSSNLCSLRCNVDRLAFSCIWEMNHNAEILKVRFTKSAINSKASLTY 590
Query: 633 EHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALR 692
AQ ID S + + D+ S++ L +++KILK +R GAL
Sbjct: 591 AEAQMRID-------SAAMND------------DITTSLRGLNKLAKILKKRRIEKGALT 631
Query: 693 LENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH 751
L + + F D E P D + N + EEFMLLAN + A+ I F + ALLR+H
Sbjct: 632 LSSPEVRFHMDSETHDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKH 691
Query: 752 PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPM 810
PAP L++ T ++ SL++A + + L+ ATR M
Sbjct: 692 PAPPPSNYEILVKAAKSKNLEIKTDTAKSLADSLDRADSPT---FPYLNTLLRILATRCM 748
Query: 811 QLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
A YFCSG D D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 749 MQAVYFCSG---MDNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTY 801
>gi|398410804|ref|XP_003856750.1| exosome complex exonuclease DIS3 [Zymoseptoria tritici IPO323]
gi|339476635|gb|EGP91726.1| hypothetical protein MYCGRDRAFT_67423 [Zymoseptoria tritici IPO323]
Length = 993
Score = 283 bits (725), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 225/732 (30%), Positives = 335/732 (45%), Gaps = 129/732 (17%)
Query: 147 DNPSHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLI 206
D + + E I+ + SM A+ ++ G + ++ V+ +N LE ++ ++I
Sbjct: 242 DQRATRDERAKSIYPDYMSMSAMITGVKAGTLHQGIFNVSPYNYLEGSAQVPAFDRPLII 301
Query: 207 TGIAAQNRAVEGDFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSK 266
G NRAV GD V++++ S W + +S ++E+ +L N
Sbjct: 302 QGRENSNRAVSGDIVVLEMLPKSQWK-----APSSKVIEEDDLTKNDNA----------- 345
Query: 267 VDVSYEYSNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQ 326
++D SSEA +TEK +
Sbjct: 346 -------------------ENEDDSSEAL----------------------TTEKERKAL 364
Query: 327 QNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDA 386
Q + A +++ +PT +VV II+R+ W Y G KD+
Sbjct: 365 QEEAKRAHGKVNE-----GKPQPTAKVVGIIKRN--------------WRQYVGHIDKDS 405
Query: 387 KKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDE 446
K+ + S ++ + L P + PK+ V + + + KR V ID
Sbjct: 406 VKSGAKQS-RSQQTVFLVPMDKRIPKIRVRTRQAGELLGKR------------VLVTIDS 452
Query: 447 WNEESPFPQAHVLHVFG----RGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWE 500
W+ ES +P H + G +G E E A+L E + F L CLP W+
Sbjct: 453 WDRESRYPVGHFIRSLGELETKGAETE----ALLLEWDVQYRPFPKTVLDCLPAEGHDWK 508
Query: 501 VPQEEL----LSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVL 556
VP ++ R+DLR+ + +IDP D+DDAL +L +G +VGVHIADVS+FV
Sbjct: 509 VPVDKADPGWKGRQDLRDLLVCSIDPPGCVDIDDALHAVKLPNGNFQVGVHIADVSHFVK 568
Query: 557 PGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD 616
P A+D EA +R T+VY++ ++I MLP+LL ++ SL P V+R AFS+ W++N D+++
Sbjct: 569 PNNAMDKEASLRGTTVYLVDKRIDMLPMLLGTDLCSLKPYVERYAFSVLWEVNENADIIN 628
Query: 617 RWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 676
++VIRS SYE AQ ID DV + L +G ++ L
Sbjct: 629 STFTKSVIRSREAFSYERAQLRID---DVSQQDELTQG----------------MRYLMM 669
Query: 677 VSKILKDKRFTDGALRLENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 735
+SK L+ KR GAL L + + + E P D D N L EEFMLLAN + A
Sbjct: 670 LSKKLRAKRMAAGALNLASPEVRIETESETSDPVDVKTKQLLDTNQLVEEFMLLANISVA 729
Query: 736 EVIARAFPDSALLRRHPAPNMRKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 794
AFP +ALLRRH AP E K L++ T SS SL+ +
Sbjct: 730 GKNYEAFPQTALLRRHGAPPKTNFEELSNQLKVKKNLEIRTDSSKALADSLDTC---VDP 786
Query: 795 DYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVH 853
F+ L+ ATR M A YFCSG + ++ HY LA +YTHFTSP+RRY DL H
Sbjct: 787 QNPFFNTLVRILATRCMMSAEYFCSGT-QAYPEFRHYGLASEIYTHFTSPIRRYADLEAH 845
Query: 854 RTLNAALEAEKL 865
R L AA++ E L
Sbjct: 846 RQLAAAIDYEPL 857
>gi|219521928|ref|NP_001137160.1| DIS3-like exonuclease 1 isoform 1 [Homo sapiens]
gi|166201903|sp|Q8TF46.2|DI3L1_HUMAN RecName: Full=DIS3-like exonuclease 1
Length = 1054
Score = 283 bits (725), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 184/522 (35%), Positives = 280/522 (53%), Gaps = 38/522 (7%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 330 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 372
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK+ + + T++ V RID W S +P H + V GR G++
Sbjct: 373 RIPKIRISTQQA------------ETLQDFRVVVRIDSWESTSVYPNGHFVRVLGRIGDL 420
Query: 469 EPQINAILYENAICCSGFSPESLSCLPC----VPWEVPQEELLSRKDLR-NFCIFTIDPS 523
E +I IL EN+I FS + +P PW+V EE RKDLR + +F+IDP
Sbjct: 421 EGEIATILVENSISVIPFSEAQMCEMPVNTPESPWKVSPEEEQKRKDLRKSHLVFSIDPK 480
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
D+DD LS+ L++G +GVHIADV++FV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 481 GCEDVDDTLSVRTLNNGNLELGVHIADVTHFVAPNSYIDIEARTRATTYYLADRRYDMLP 540
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
+LS ++ SL GVDR A SI W+L+ A ++ W GRT+IRS KL YE AQ+++DG
Sbjct: 541 SVLSADLCSLLGGVDRYAVSIMWELDKASYEIKKVWYGRTIIRSAYKLFYEAAQELLDGN 600
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
V + + Q + ++V +I L ++++ ++ KR GAL LE +
Sbjct: 601 LSVVDDIPEFKDLDEKSRQAKLEELVWAIGKLTDIARHVRAKRDGCGALELEGVEVCVQL 660
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
D+ +D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 661 DDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 720
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
G +DT S+ SL+ A + D ++ +L + AT+ M A YF +G
Sbjct: 721 RECAKAKGFFIDTRSNKTLADSLDNAND--PHDPIVNRLLRSMATQAMSNALYFSTGSCA 778
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ +K
Sbjct: 779 EE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDK 819
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 94 MPTMHINEEESA--ESGSTQSQLLLATDLCGSIISRSCPEPIANDSSCWA-YTNKDDNPS 150
MP + + E+E A + GS + + T + + P+ A C + ++ + +
Sbjct: 158 MPIVMVTEDEEAIQQYGSETEGVFVIT--FKNYLDNFWPDLKAAHELCDSILQSRREREN 215
Query: 151 HQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHN-RLEAYCKIEGVQT------- 202
E+ K + H +E + ++ G + + VN H ++EA+ +++G +
Sbjct: 216 ESQESHGKEYPEHLPLEVLEAGIKSGRYIQGILNVNKHRAQIEAFVRLQGASSKDSDLVS 275
Query: 203 DVLITGIAAQNRAVEGDFVLIKV 225
D+LI G+ A+NR++ GD V++++
Sbjct: 276 DILIHGMKARNRSIHGDVVVVEL 298
>gi|114657741|ref|XP_001174669.1| PREDICTED: DIS3 mitotic control homolog (S. cerevisiae)-like
isoform 8 [Pan troglodytes]
gi|410206628|gb|JAA00533.1| DIS3 mitotic control homolog-like [Pan troglodytes]
gi|410246988|gb|JAA11461.1| DIS3 mitotic control homolog-like [Pan troglodytes]
gi|410246990|gb|JAA11462.1| DIS3 mitotic control homolog-like [Pan troglodytes]
gi|410308652|gb|JAA32926.1| DIS3 mitotic control homolog-like [Pan troglodytes]
gi|410308662|gb|JAA32931.1| DIS3 mitotic control homolog-like [Pan troglodytes]
gi|410329463|gb|JAA33678.1| DIS3 mitotic control homolog-like [Pan troglodytes]
gi|410329465|gb|JAA33679.1| DIS3 mitotic control homolog-like [Pan troglodytes]
Length = 1054
Score = 283 bits (725), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 184/522 (35%), Positives = 281/522 (53%), Gaps = 38/522 (7%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 330 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 372
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK+ + + T++ V RID W S +P H + V GR G++
Sbjct: 373 RIPKIRISTQQA------------ETLQDFRVVVRIDSWESTSVYPNGHFVRVLGRIGDL 420
Query: 469 EPQINAILYENAICCSGFSPESLSCLPC----VPWEVPQEELLSRKDLR-NFCIFTIDPS 523
E +I IL EN+I FS + +P PW+V EE RKDLR + +F+IDP
Sbjct: 421 EGEIATILVENSISVIPFSEAQMCEMPVNTPESPWKVSPEEEQKRKDLRKSHLVFSIDPK 480
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
D+DD LS+ L++G +GVHIADV++FV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 481 GCEDVDDTLSVRTLNNGNLELGVHIADVTHFVAPNSYIDIEARTRATTYYLADRRYDMLP 540
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
+LS ++ SL GVDR A SI W+L+ A ++ W GRT+IRS KL YE AQ+++DG
Sbjct: 541 SVLSADLCSLLGGVDRYAVSIMWELDKASYEIKKVWYGRTIIRSAYKLFYEAAQELLDGN 600
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
V + + Q + ++V +I L ++++ ++ KR GAL LE ++
Sbjct: 601 LSVVDDIPEFKDLDEKSRQAKLEELVWAIGKLTDIARHVRAKRDGCGALELEGAEVRVQL 660
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
D+ +D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 661 DDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 720
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
G +DT S+ SL+ A + D ++ +L + AT+ M A YF +G
Sbjct: 721 RECAKAKGFFIDTRSNKTLADSLDNAND--PHDPIVNRLLRSMATQAMSNALYFSTGSCA 778
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ +K
Sbjct: 779 EE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDK 819
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 94 MPTMHINEEESA--ESGSTQSQLLLATDLCGSIISRSCPEPIANDSSCWA-YTNKDDNPS 150
MP + + E+E A + GS + + T + + P+ A C + ++ + +
Sbjct: 158 MPIVMVTEDEEAIQQYGSETEGVFVIT--FKNYLDNFWPDLKAAHELCDSILQSRREREN 215
Query: 151 HQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHN-RLEAYCKIEGVQT------- 202
E+ K + H +E + ++ G + + VN H ++EA+ +++G +
Sbjct: 216 ESQESHGKEYPEHLPLEVLEAGIKSGRYIQGILNVNKHRAQIEAFVRLQGASSKDSDLVS 275
Query: 203 DVLITGIAAQNRAVEGDFVLIKV 225
D+LI G+ A+NR++ GD V++++
Sbjct: 276 DILIHGMKARNRSIHGDVVVVEL 298
>gi|444721663|gb|ELW62387.1| DIS3-like exonuclease 1 [Tupaia chinensis]
Length = 1027
Score = 283 bits (724), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 188/535 (35%), Positives = 282/535 (52%), Gaps = 44/535 (8%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 303 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 345
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK+ + + A ++ V RID W S +P H + V GR G++
Sbjct: 346 RIPKIRISTQQA------------AALQDFRVVVRIDSWEATSVYPNGHFVRVLGRIGDL 393
Query: 469 EPQINAILYENAICCSGFSPESLSCLPC----VPWEVPQEELLSRKDLR-NFCIFTIDPS 523
E +I IL EN+I FS + +P PW+V EE RKDLR + +F+IDP
Sbjct: 394 EGEIATILVENSISVIPFSEAQMGEMPVNTPESPWKVSPEEEHERKDLRRSHLVFSIDPK 453
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
D+DD LS+ L +G +GVHIADV++FV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 454 GCEDVDDTLSVRTLGNGDLELGVHIADVTHFVPPNSCIDIEARTRATTYYLADRRFDMLP 513
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR-WIGRTVIRSCCKLSYEHAQDIIDGK 642
+LS ++ SL GVDR A S+ W+L+ + + W GRT+IRS KL YE AQ ++DG
Sbjct: 514 SVLSADLCSLLGGVDRYAVSVMWELDRTSYQIKKVWYGRTIIRSAYKLFYEAAQQLLDGN 573
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
F + + Q + ++ +I L ++++ ++ KR GAL LE +
Sbjct: 574 FSAATDIPELRDLDEKSRQAKLEELAWAIGKLTDIARHVRAKRDQCGALELEGVEVRVQL 633
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
DE +D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 634 DERKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 693
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
G +DT S+ SL++A + D V+ +L + AT+ M A YF +G
Sbjct: 694 RECAKAKGFFIDTRSNKTLADSLDKAHD--PSDPVVNRLLRSMATQAMSNALYFSTGSCA 751
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNN 877
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ K RRM K+N
Sbjct: 752 EE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAIS------KDRRMDVKDN 799
Score = 43.5 bits (101), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 154 EARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHN-RLEAYCKIEGVQT-------DVL 205
E+ K + H +E + ++ G + L VN H ++EA+ +++G + D+L
Sbjct: 193 ESHRKEYPEHLPLEVLEAGIKSGRYIQGLLNVNKHRAQIEAFVRLQGASSKDSALVSDIL 252
Query: 206 ITGIAAQNRAVEGDFVLIKVDRLSLW-AKMKGFSNNSSIVEDSNLPTE 252
+ G+ A+NR++ GD V +++ + W + N S + P+E
Sbjct: 253 VHGMKARNRSLHGDVVAVELLPKNEWKGRTAALCENDSDDKAGEAPSE 300
>gi|388580087|gb|EIM20404.1| RNB-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 939
Score = 283 bits (724), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 200/562 (35%), Positives = 290/562 (51%), Gaps = 71/562 (12%)
Query: 318 STEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFN 377
S+++V +ND +N E++ +SS +PTG+VV II+R QW +
Sbjct: 296 SSDQVIDDDEND-LNPAEQI---LSSDDNVQPTGKVVGIIKR--------------QWRS 337
Query: 378 YKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEM 437
Y K S+ S ++ + ++P + PK IK + + I+
Sbjct: 338 YVCHLDKSTITTSSNQS---QQTVFVSPIDRRIPK-----------IKIKTRQASNLIDQ 383
Query: 438 ELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-- 495
++V A ID+WN S +PQ H + G+ E +I ++L E + FS L+CLP
Sbjct: 384 KVVVA-IDQWNINSRYPQGHFVRALGKVESKEAEIESLLLEYDVPYRAFSKSILNCLPPE 442
Query: 496 CVPWEVPQEELLS-----RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIAD 550
W VP ++ + R DLR+ I +IDP TD+DDAL + L +G GVHIAD
Sbjct: 443 GESWTVPSKDSTNPIWKDRVDLRDEVICSIDPPGCTDIDDALHAKYLPNGNIEAGVHIAD 502
Query: 551 VSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNS 610
VS+FV P T +D+EA R T+VY++ ++I MLP LL + SL P V+RLAFS+ W+LNS
Sbjct: 503 VSHFVHPDTTMDLEAASRGTTVYLVDKRIDMLPSLLGTNLCSLRPHVERLAFSVIWELNS 562
Query: 611 AGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRS 670
++VD ++VI S +YE AQ D K +L + + +
Sbjct: 563 NAEIVDIKFHKSVIASKSAFTYEEAQLRKDDK-------SLNDP------------LTVA 603
Query: 671 IKSLYEVSKILKDKRFTDGALRLENSKPVFLFD--EYGTPYDSVLSGREDLNFLFEEFML 728
I+ L ++ LK KR GAL L + + D E P D ++ N L EEFML
Sbjct: 604 IRLLNHIAIQLKQKRLERGALDLASPEVKIHLDSSESTEPIDVEQKESKETNKLVEEFML 663
Query: 729 LANKTAAEVIARAFPDSALLRRH---PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSL 785
LAN T A I FP +++LRRH P N L+E + L LD SSSG +SL
Sbjct: 664 LANCTVATKINETFPGTSVLRRHLPPPKQNFEGLQEI--LFKRKNLNLDVSSSGALAKSL 721
Query: 786 EQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPL 844
+ +K + F+ L+ ATR M A YFCSG +T + HY LA P+YTHFTSP+
Sbjct: 722 DNCVDKQEGS---FNTLVRIMATRCMLSAEYFCSGSVSKET-FSHYGLAAPIYTHFTSPI 777
Query: 845 RRYPDLVVHRTLNAALEAEKLY 866
RRY D++ HR L+AA+ + L+
Sbjct: 778 RRYADILAHRQLSAAINYQPLH 799
>gi|301757141|ref|XP_002914418.1| PREDICTED: exosome complex exonuclease RRP44-like isoform 2
[Ailuropoda melanoleuca]
Length = 928
Score = 283 bits (723), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 184/536 (34%), Positives = 272/536 (50%), Gaps = 65/536 (12%)
Query: 335 ERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSL 393
ER+ ++ +PTGRVV II+R+ W Y G S+ D K++R L
Sbjct: 297 ERILNTAANEKMLKPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL 342
Query: 394 SVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDAT-IEMELVAARIDEWNEESP 452
TP + P++ R+E A+ +E + ID W S
Sbjct: 343 ---------FTPADRRIPRI-------------RIETRQASALEGRRIIVAIDGWPRNSR 380
Query: 453 FPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDL 512
+P H + G G+ E + +L E+ + FS LS LP +PW + ++++ +R+DL
Sbjct: 381 YPNGHFVKNLGDVGDKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDL 440
Query: 513 RNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSV 572
R+ C+ ++DP TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+V
Sbjct: 441 RHLCVCSVDPPGCTDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTV 500
Query: 573 YMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSY 632
Y+ +++I M+P LLS + SL VDRLAFS W++N +++ ++ I S L+Y
Sbjct: 501 YLCEKRIDMVPELLSSNLCSLRCNVDRLAFSCIWEMNHNAEILKVRFTKSAINSKASLTY 560
Query: 633 EHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALR 692
AQ ID S + + D+ S++ L +++KILK +R GAL
Sbjct: 561 AEAQMRID-------SAAMND------------DITTSLRGLNKLAKILKKRRIEKGALT 601
Query: 693 LENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH 751
L + + F D E P D + N + EEFMLLAN + A+ I F + ALLR+H
Sbjct: 602 LSSPEVRFHMDSETHDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKH 661
Query: 752 PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPM 810
PAP L++ T ++ SL++A + + L+ ATR M
Sbjct: 662 PAPPPSNYEILVKAAKSKNLEIKTDTAKSLADSLDRADSP---TFPYLNTLLRILATRCM 718
Query: 811 QLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
A YFCSG D D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 719 MQAVYFCSG---MDNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTY 771
>gi|395822371|ref|XP_003784492.1| PREDICTED: DIS3-like exonuclease 1 [Otolemur garnettii]
Length = 1053
Score = 282 bits (722), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 188/526 (35%), Positives = 285/526 (54%), Gaps = 46/526 (8%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 330 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 372
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK I+ ++ +A + +V RID W S +P H + V GR G++
Sbjct: 373 RIPK-----------IRISTQQAEALQDFRVVV-RIDSWESTSLYPNGHFVRVLGRIGDL 420
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLRN-FCIFTIDPS 523
E +I IL EN+I FS + +P PW+V EE RKDLR+ +F+IDP
Sbjct: 421 EGEIATILVENSISVVPFSEAQMCEMPVNTPENPWKVSPEEEQERKDLRHTHLVFSIDPK 480
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
D+DD LS+ L +G +GVHIADV++FV + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 481 GCEDVDDTLSVRTLKNGNLELGVHIADVTHFVALNSYIDIEARTRATTYYLADRRYDMLP 540
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLN-SAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
+LS ++ SL GVDR A S+ W+L+ ++ ++ W GRT+IRS KL YE AQ+++DG
Sbjct: 541 SILSADLCSLLGGVDRYAVSVMWELDKTSYEIKKVWYGRTIIRSAYKLCYEAAQELLDGN 600
Query: 643 F----DVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKP 698
F D+ L E Q GQ E ++V +I L ++++ ++ KR GAL LE +
Sbjct: 601 FGVVDDIPEFKNLDEKSRQ--GQLE--ELVWAIGKLTDIARHVRAKRDRCGALELEGVEV 656
Query: 699 VFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRK 758
DE +D + +++ E M+LAN A+ I +FP ALLR+HP P+
Sbjct: 657 RVQLDEKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEF 716
Query: 759 LREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCS 818
E G +DT S+ SL+ A + D ++ +L + AT+ M A YF +
Sbjct: 717 FSELRECAKAKGFFIDTRSNKTLADSLDNAND--PSDPIVNRLLRSMATQAMSNALYFST 774
Query: 819 GDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
G ++ ++ HY LA YTHFTSP+RRY D++VHR L AA+ +K
Sbjct: 775 GSCAEE-EFHHYGLALDKYTHFTSPIRRYSDIIVHRLLMAAISKDK 819
Score = 45.1 bits (105), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 45/80 (56%), Gaps = 8/80 (10%)
Query: 154 EARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHN-RLEAYCKIEGVQT-------DVL 205
E+ K + H +E + ++ G + + VN H ++EA+ +++G + D+L
Sbjct: 219 ESHGKEYPEHLPLEVLEAGIKSGRYIQGILNVNKHRAQIEAFVRLQGASSKDSDLVSDIL 278
Query: 206 ITGIAAQNRAVEGDFVLIKV 225
I G+ A+NR++ GD V++++
Sbjct: 279 IHGMKARNRSIHGDVVVVEL 298
>gi|356509070|ref|XP_003523275.1| PREDICTED: exosome complex exonuclease RRP44-like [Glycine max]
Length = 934
Score = 282 bits (721), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 188/557 (33%), Positives = 287/557 (51%), Gaps = 67/557 (12%)
Query: 313 PSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNV 372
P+++D + S Q + S +++ P+ RP+GR+V II+R+
Sbjct: 312 PNSADDAPRTISQQGS---------SEQVNAVPS-RPSGRIVGIIKRN------------ 349
Query: 373 NQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGD 432
W +Y GS + S + ++ + PK+ + + L + + KR+
Sbjct: 350 --WHSY-CGSLEPMPMPAGSGGIAHALFVS---KDRRIPKIRIQTRQLENLLDKRI---- 399
Query: 433 ATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLS 492
+VA +D W+ +S +P H + G G+ + + +L EN I FS + L+
Sbjct: 400 ------IVA--VDSWDRQSRYPSGHYVRTIGEIGDRDTESEVVLIENDINTRPFSSQVLA 451
Query: 493 CLPCVPWEVPQEELLS--RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIAD 550
CLP +PW V E+L + RKDLR+ +F++DP D+DDAL L +G VGVHIAD
Sbjct: 452 CLPPLPWVVSSEDLSNPIRKDLRHLRVFSVDPPGCKDIDDALHCHVLPNGNFEVGVHIAD 511
Query: 551 VSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNS 610
V+ FV PGT LD EA R TSVY+++R+I MLP L+E++ SL V+RLAFS+ W++
Sbjct: 512 VTNFVYPGTPLDDEAAQRGTSVYLVERRIDMLPKPLTEDICSLRSDVERLAFSVIWEMTP 571
Query: 611 AGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRS 670
D++ ++VI+S LSY AQ +D ++ +
Sbjct: 572 EADIIATSYTKSVIKSSAALSYVEAQARMDDSRLMDP-------------------ITAD 612
Query: 671 IKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLL 729
++++ ++K ++ +R GAL L +++ F D E P D + + N + EEFML
Sbjct: 613 LRNMNSLAKKMRLRRIERGALTLASAEVKFQIDTETHDPLDIGMYQIREANQMVEEFMLA 672
Query: 730 ANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAR 789
AN + A+ I ++FP +LLRRHP P L + GL LD SSS SL+ A
Sbjct: 673 ANVSVAQQILKSFPLCSLLRRHPTPTREMLEPLLRTAAAVGLHLDVSSSKALADSLDHA- 731
Query: 790 EKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYP- 848
+ DD ++ ATR M A YFCSGD ++ HY LA +YTHFTSP+RRY
Sbjct: 732 --VGDDPYFNKLIRILATRCMTQAVYFCSGDLS-PPEYHHYGLAALLYTHFTSPIRRYAV 788
Query: 849 DLVVHRTLNAALEAEKL 865
D++VHR L A+L KL
Sbjct: 789 DVIVHRLLAASLGISKL 805
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 39/83 (46%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R I++ H M + L +G + RVN +N EAY E + +++I G + NRA
Sbjct: 214 RKVIYSEHKPMSEITSGLHRGIYHQGKLRVNRYNPFEAYVGSESIGDEIIIYGRSNMNRA 273
Query: 216 VEGDFVLIKVDRLSLWAKMKGFS 238
+GD V ++ W + S
Sbjct: 274 FDGDIVAAELLPQDQWQGVSSLS 296
>gi|325281572|ref|YP_004254114.1| ribonuclease R [Odoribacter splanchnicus DSM 20712]
gi|324313381|gb|ADY33934.1| ribonuclease R [Odoribacter splanchnicus DSM 20712]
Length = 751
Score = 282 bits (721), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 189/522 (36%), Positives = 254/522 (48%), Gaps = 74/522 (14%)
Query: 347 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 406
+RP G VV I+ER ++ VG + RS+ Y L PT
Sbjct: 133 RRPEGEVVEILER--KKGTFVGVVQ------------------RSA------NYAFLIPT 166
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 466
+ P V + P E GD V +I +W E P V+ V GR G
Sbjct: 167 GKQLPYDVFI----PTEHLNGAENGDK------VVVKIKDWPESQKNPVGEVIEVLGRPG 216
Query: 467 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 526
+ + ++NAI+ E + F P L +P ++P+EE+ R+D R FTIDP A
Sbjct: 217 DNDTEMNAIMAEYELPVK-FPPNVLKAAEKIPLDIPEEEIRKRRDCRELTTFTIDPKDAK 275
Query: 527 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 586
D DDALS+ L +G+ VGVHIADVSY+V T LD EA R+TSVY++ R IPMLP L
Sbjct: 276 DFDDALSVRTLKEGVYEVGVHIADVSYYVKENTVLDKEAYARATSVYLVDRTIPMLPERL 335
Query: 587 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 646
S V SL P D+L FS + L++ V+D+W GRTVIRS + +YE AQ+ I+G
Sbjct: 336 SNGVCSLRPDEDKLCFSAIFKLDANAQVLDQWFGRTVIRSNRRFTYEEAQERIEG----- 390
Query: 647 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYG 706
EG D I L +++ L+ RF GA+ + + F DE G
Sbjct: 391 -----AEG-----------DYREEILLLNRLAQKLRQDRFKAGAIDFDRVEVKFNLDEKG 434
Query: 707 TPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSA------LLRRHPAPNMRKLR 760
P ++ N L EEFMLLANK AE I + P S + R H P KL
Sbjct: 435 HPVSVYFKRSKEANKLIEEFMLLANKKVAERIGK--PKSGKKAPTFVYRIHENPLPEKLE 492
Query: 761 EFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGD 820
EF F +K G L T S S+ ++KD +++ A R M A+Y
Sbjct: 493 EFNRFVAKFGYGLKTGSRKALTSSMNNLMAEVKDKPEQ-NMIETLAVRTMAKAAYSTD-- 549
Query: 821 FKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEA 862
+ GHY LAF YTHFTSP+RRYPD++VHR L L++
Sbjct: 550 -----NIGHYGLAFDYYTHFTSPIRRYPDVMVHRLLQRYLDS 586
>gi|56605836|ref|NP_001008381.1| DIS3-like exonuclease 1 [Rattus norvegicus]
gi|55250593|gb|AAH85932.1| DIS3 mitotic control homolog (S. cerevisiae)-like [Rattus
norvegicus]
gi|149041954|gb|EDL95795.1| similar to expressed sequence AV340375, isoform CRA_b [Rattus
norvegicus]
Length = 971
Score = 282 bits (721), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 185/526 (35%), Positives = 287/526 (54%), Gaps = 46/526 (8%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 247 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 289
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK I+ ++ +A + +V RID W S +P H + V GR G++
Sbjct: 290 RIPK-----------IRISTQQAEALQDFRVVV-RIDSWETTSVYPNGHFVRVLGRIGDL 337
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLRN-FCIFTIDPS 523
E +I IL EN+I FS + +P PW+V +E R+DLR+ +F+IDP
Sbjct: 338 EGEIATILVENSINVVPFSEAQMCEMPVNTAENPWKVSPKEEQERRDLRSTHLVFSIDPK 397
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
D+DDALS+ L++G +GVHIADV++FV P + +D+EA+ R+T+ Y+ R+ MLP
Sbjct: 398 GCEDVDDALSVRTLNNGNLELGVHIADVTHFVAPNSYIDVEARTRATTYYLADRRYDMLP 457
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLN-SAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
+LS ++ SL GVDR A S+ W+L+ ++ ++ W GRT+IRS KL YE AQ+++DG
Sbjct: 458 SILSADLCSLLGGVDRYAVSVMWELDKTSYEIKKVWYGRTIIRSAYKLFYEAAQELLDGN 517
Query: 643 F----DVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKP 698
F D+ TL E Q + ++V +I L ++++ ++ KR GAL LE +
Sbjct: 518 FSIVDDIPEFKTLEEQ----NRQAKLEELVWAIGKLTDIARHIRAKRDRCGALELEGVEV 573
Query: 699 VFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRK 758
D+ +D + +++ E M+LAN A+ I +FP ALLR+HP P+
Sbjct: 574 RVQLDDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEF 633
Query: 759 LREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCS 818
E G +DT S+ SL+ A + D ++ +L + AT+ M A YF +
Sbjct: 634 FSELRECAKAKGFFIDTRSNKTLADSLDSAND--PSDPLVNKLLRSMATQAMSNALYFST 691
Query: 819 GDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
G ++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ +K
Sbjct: 692 GSCAEE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDK 736
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 57/126 (45%), Gaps = 25/126 (19%)
Query: 114 LLLATDLCGSIISRSCPEPIANDSSCWAYTNKDDNPSHQSEARCKIFAPHWSMEAVNEAL 173
L A +LC SII ++ + S E K + H +E + +
Sbjct: 113 LKAAHELCDSIIQ-----------------SRRERESESQETHGKEYPEHLPLEVLEAGI 155
Query: 174 EKGDAFKALYRVNAHN-RLEAYCKIEGVQT-------DVLITGIAAQNRAVEGDFVLIKV 225
+ G + + VN H ++EA+ +++G + D+LI G A+NR++ GD V++++
Sbjct: 156 KSGRYIQGILNVNKHRAQIEAFVRLQGASSKDSGLVSDILIHGSKARNRSIHGDVVVVEL 215
Query: 226 DRLSLW 231
S W
Sbjct: 216 LPKSEW 221
>gi|307186828|gb|EFN72248.1| Exosome complex exonuclease RRP44 [Camponotus floridanus]
Length = 945
Score = 282 bits (721), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 199/605 (32%), Positives = 303/605 (50%), Gaps = 83/605 (13%)
Query: 335 ERLSAMISSYPTKR--PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSS 392
E++ A S TK PTG++V II R R+ + + Q KG R
Sbjct: 284 EKVLAKTSLLKTKEKIPTGKIVGIIRRKWRQ-----YCGILQPSPIKGNVRH-------- 330
Query: 393 LSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATI-EMELVAARIDEWNEES 451
P K PK+ R+E A I + + +D W S
Sbjct: 331 ---------LFVPAERKIPKI-------------RIETRQAEILSKQRIIVALDSWPRNS 368
Query: 452 PFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKD 511
+P H + G G+ E + +L E+ + S FS LS LP +PW + + ++ R+D
Sbjct: 369 RYPLGHFVRALGNIGDKETENEVLLLEHDVPPSHFSDAVLSFLPKLPWVITEMDIAQRED 428
Query: 512 LRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTS 571
LR+ I ++DP TD+DDAL L +G VGVHIADVS+F+ PGTALD EA R+T+
Sbjct: 429 LRHLDICSVDPPGCTDIDDALHCRNLPNGNFDVGVHIADVSHFIRPGTALDKEAASRATT 488
Query: 572 VYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLS 631
VY++ ++I M+P LLS + SL G +R AFS W+++S ++V+ +++IRS ++
Sbjct: 489 VYLVDKRIDMVPELLSSNLCSLRGGEERFAFSCIWEIDSDANIVNTRFCKSIIRSRRAMT 548
Query: 632 YEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGAL 691
YE AQ ID ++ + +S++ L +++K LK +R +GAL
Sbjct: 549 YEEAQLKIDDATQQDA-------------------IAQSLRGLNQIAKQLKKRRLQNGAL 589
Query: 692 RLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRR 750
L + + F D E P D + N + EEFMLLAN + AE I + FP+ A+LRR
Sbjct: 590 TLASPEIRFQVDSETHDPIDVEAKKLRETNSMVEEFMLLANISVAERILKEFPECAMLRR 649
Query: 751 HPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRP 809
HP P G ++T++ + QSLE+++ K+ F+ ++ ATR
Sbjct: 650 HPEPPQSNFEPLIKAAKNQGFIINTNTGKELAQSLEESK---KESNPYFNTMLKILATRC 706
Query: 810 MQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY--- 866
M A YF SG + + ++ HY LA P+YTHFTSP+RRY D++VHR L + A+ Y
Sbjct: 707 MLQAVYFISGMHQPE-EFKHYGLACPIYTHFTSPIRRYADIIVHRLLAVCIGADATYPQL 765
Query: 867 --WKHRRMLPKN-NHREGV---RGR----FLTGIFYDKDAAESLEG------REALSVAA 910
K+ +L +N N+R + GR T +F+ +D + EG + AL V
Sbjct: 766 LDKKNNHLLCQNLNYRNRMAQYAGRASVALHTHLFF-RDKVQDEEGYILFVRKNALQVLI 824
Query: 911 LKYGV 915
KYG+
Sbjct: 825 PKYGL 829
>gi|332235946|ref|XP_003267166.1| PREDICTED: DIS3-like exonuclease 1 isoform 2 [Nomascus leucogenys]
Length = 971
Score = 282 bits (721), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 184/522 (35%), Positives = 279/522 (53%), Gaps = 38/522 (7%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 247 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 289
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK+ + + T++ V RID W S +P H + V GR G++
Sbjct: 290 RIPKIRISTQQA------------ETLQDFRVVVRIDSWESTSVYPNGHFVRVLGRIGDL 337
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLR-NFCIFTIDPS 523
E +I IL EN I FS + +P PW+V EE RKDLR + +F+IDP
Sbjct: 338 EGEIATILVENNISVIPFSEAQMCEMPVNTPENPWKVSPEEEQKRKDLRKSHLVFSIDPK 397
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
D+DD LS+ L++G +GVHIADV++FV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 398 GCEDVDDTLSVRTLNNGNLELGVHIADVTHFVAPNSYIDIEARTRATTYYLADRRYDMLP 457
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
+LS ++ SL GVDR A SI W+L+ A ++ W GRT+IRS KL YE AQ+++DG
Sbjct: 458 SVLSADLCSLLGGVDRYAVSIMWELDKASYEIKKVWYGRTIIRSAYKLFYEAAQELLDGN 517
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
V + + Q + ++V +I L ++++ ++ KR GAL LE +
Sbjct: 518 LSVVDDIPEFKDLDEKSRQAKLEELVWAIGKLTDIARHVRAKRDGCGALELEGVEVRVQL 577
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
D+ +D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 578 DDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 637
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
G +DT S+ SL+ A + D ++ +L + AT+ M A YF +G
Sbjct: 638 RECAKAKGFFIDTRSNKTLADSLDNAND--PHDPIVNRLLRSMATQAMSNALYFSTGSCA 695
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ +K
Sbjct: 696 EE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDK 736
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 45/80 (56%), Gaps = 8/80 (10%)
Query: 154 EARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHN-RLEAYCKIEGVQT-------DVL 205
E+ K + H +E + ++ G + + VN H ++EA+ +++G + D+L
Sbjct: 136 ESHGKEYPEHLPLEVLEAGIKSGRYIQGILNVNKHRAQIEAFVRLQGASSKDSDLVSDIL 195
Query: 206 ITGIAAQNRAVEGDFVLIKV 225
I G+ A+NR++ GD V++++
Sbjct: 196 IHGMKARNRSIHGDVVVVEL 215
>gi|148694117|gb|EDL26064.1| expressed sequence AV340375, isoform CRA_a [Mus musculus]
Length = 970
Score = 282 bits (721), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 181/522 (34%), Positives = 282/522 (54%), Gaps = 38/522 (7%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 247 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 289
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK I+ ++ +A + +V RID W S +P H + V GR G++
Sbjct: 290 RIPK-----------IRISTQQAEALQDFRVVV-RIDSWEATSVYPNGHFVRVLGRIGDL 337
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLRN-FCIFTIDPS 523
E +I IL EN+I FS + +P PW+V +E RKDLR +F+IDP
Sbjct: 338 EGEIATILVENSISVVPFSEAQMCEMPVNTPENPWKVSPKEEQERKDLRTTHLVFSIDPK 397
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
D+DD LS+ L +G +GVHIADV++FV P + +D+EA+ R+T+ Y+ R+ MLP
Sbjct: 398 GCEDVDDTLSVRTLDNGNLELGVHIADVTHFVAPNSYIDVEARTRATTYYLADRRYDMLP 457
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLN-SAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
+LS ++ SL GVDR A S+ W+L+ ++ ++ W GRT+IRS KL YE AQ+++DG
Sbjct: 458 SILSADLCSLLGGVDRYAVSVMWELDKTSYEIKKVWYGRTIIRSAYKLFYEAAQELLDGN 517
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
F + + + Q + ++V +I L ++++ ++ KR GAL LE +
Sbjct: 518 FSIVDDIPELKALDKQSQQAKLEELVWAIGKLTDIARHIRAKRDRCGALELEGVEVRVQL 577
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
D+ +D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 578 DDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 637
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
G +DT S+ SL+ A + D ++ +L + AT+ M A YF +G
Sbjct: 638 RECAKAKGFFIDTRSNKTLADSLDSAND--PKDPLVNKLLRSMATQAMSNALYFSTGSCA 695
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ +K
Sbjct: 696 EE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDK 736
Score = 44.7 bits (104), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 25/126 (19%)
Query: 114 LLLATDLCGSIISRSCPEPIANDSSCWAYTNKDDNPSHQSEARCKIFAPHWSMEAVNEAL 173
L A DLC SI+ ++ + + E K + H +E + +
Sbjct: 113 LKAAHDLCDSILQ-----------------SRRERETESQETHGKEYPEHLPLEVLEAGI 155
Query: 174 EKGDAFKALYRVNAHN-RLEAYCKIEGVQT-------DVLITGIAAQNRAVEGDFVLIKV 225
+ G + + VN H ++EA+ ++ G + D+LI G A+NR++ GD V++++
Sbjct: 156 KSGRYIQGILNVNKHRAQIEAFVRLHGASSKDSGLVSDILIHGSKARNRSIHGDVVVVEM 215
Query: 226 DRLSLW 231
S W
Sbjct: 216 LPKSEW 221
>gi|194770788|ref|XP_001967470.1| GF20740 [Drosophila ananassae]
gi|190618480|gb|EDV34004.1| GF20740 [Drosophila ananassae]
Length = 983
Score = 282 bits (721), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 176/522 (33%), Positives = 265/522 (50%), Gaps = 59/522 (11%)
Query: 347 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 406
+ PTGR+V I+ R +W Y G + + D P
Sbjct: 348 RSPTGRIVGIVRR--------------KWRQYCGILQPSL--------IEDTSRHIFVPA 385
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 466
K P++ + + A ++ + + ID W S +P H + G G
Sbjct: 386 DRKIPRIRIETRQA------------AKLQNQRIIVTIDTWPRNSRYPHGHFVRSLGPLG 433
Query: 467 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 526
++ + IL E+ + FS E LS LP +PW + E+ R DLR+ I ++DP T
Sbjct: 434 DMATENEVILLEHDVPHCKFSEEVLSFLPKMPWTIKAEDYAKRVDLRDLYICSVDPPGCT 493
Query: 527 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 586
D+DDAL +L +G VGVHIADVS+F+ PG ALD EA R T+VY++ ++I M+P LL
Sbjct: 494 DIDDALHCRQLPNGNLEVGVHIADVSHFIRPGNALDKEAAARGTTVYLVGKRIDMVPELL 553
Query: 587 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 646
S + SL GV+R AFS W+++ +V+ + ++VI+S ++YE AQ +ID D
Sbjct: 554 SSNLCSLVGGVERFAFSCVWEVDHDANVISKRFHKSVIKSKRAMTYEEAQVLIDDPAD-- 611
Query: 647 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EY 705
++ +S+++L +++KILK +R +GAL L + + F D E
Sbjct: 612 -----------------QGEIAKSLRNLNKLAKILKKRRMDNGALVLASPEIRFQVDSET 654
Query: 706 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAF 765
P + + N + EEFMLLAN T AE IA F + A+LRRHP P
Sbjct: 655 HEPLEVEAKQMRETNSMVEEFMLLANITVAEHIAAEFTECAVLRRHPRPPPTNFDPLVKA 714
Query: 766 CSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDD 824
G Q+D S + SL++ +K+D F+ +I TR M A YF SG + +
Sbjct: 715 ARYQGYQVDIESGLELAHSLDKC---VKEDNPYFNTMIRILTTRCMMQAVYFISGSLQKE 771
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
++ HY LA P+YTHFTSP+RRY D++VHR L A++ A+ Y
Sbjct: 772 -EYFHYGLAAPIYTHFTSPIRRYSDIMVHRLLAASIGADSTY 812
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 77/168 (45%), Gaps = 13/168 (7%)
Query: 98 HINEEESAE----SGSTQSQLLLATDLCGS--------IISRSCPEPIANDSSCWAYTNK 145
HI +S++ +G T ++++L TD G+ I+ S E + + +K
Sbjct: 157 HIRASQSSKDLERTGKTATRVILLTDDAGNRAKAEADGILVASAAEYVKSLEDFPLLMDK 216
Query: 146 DDNPSHQSEARC-KIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDV 204
+ S SE + + PH SM+ + E L + + ++ + N LE +E + +
Sbjct: 217 LSHKSFDSEKQALPQYPPHLSMKELLEGLRQKKLLQGAFQASRENYLEGSVNVESFEKGI 276
Query: 205 LITGIAAQNRAVEGDFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTE 252
LI G A NRAV+GD V +++ S W+ + V ++P+E
Sbjct: 277 LIQGREALNRAVDGDLVAVELLPESEWSAPSEIVLEENNVYADDVPSE 324
>gi|358331641|dbj|GAA50418.1| DIS3-like exonuclease 2 [Clonorchis sinensis]
Length = 1909
Score = 282 bits (721), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 224/752 (29%), Positives = 359/752 (47%), Gaps = 116/752 (15%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
++ PHWS + LE R+N + +AY K DV +G+ A+NRA+
Sbjct: 90 VYIPHWSQADILAGLEDKSLLSGTLRINPKHFDDAYIKHPSGDADVFFSGLRARNRALPN 149
Query: 219 DFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCTL 278
D V ++++ LW F V+DS +P+ + + K + SY + L
Sbjct: 150 DIVAVQIEPKKLWKVFDTF------VKDS-VPSSSRE------ETKQRKRQSYVTLSEFL 196
Query: 279 LSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLS 338
S++ HD ++++ E I S SD + V+ S+ N +N S
Sbjct: 197 ASQR---HD--------FEQLVGVEVAKEIAEDLNSCSDPSPPVAPSE-NCVINHAPWWS 244
Query: 339 AMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKK-------NRS 391
+ + TG+VV II R R +G+L + + G +KD +
Sbjct: 245 II-------QRTGKVVGIINRLHSR-ACIGYLTLPK---STGTPKKDKTAQAVTEADTAT 293
Query: 392 SLSVPDRE----------YIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVA 441
S SV ++ + +L T + P +++ + P + ++ +
Sbjct: 294 STSVSSKDVANTSTNCWSHARLIQTDTRLPHLLIPRQVCPQAFI----SDPSSFKHVRYV 349
Query: 442 ARIDEWNEESPFPQAHVLHVFGRGGE--VEPQINAILYENAICCSGFSPESLSCLPCVPW 499
ARI W E S FP +L VE + + IL +GF L + P
Sbjct: 350 ARITSWPESSLFPTGELLRSLSTDSAKLVEAETDRILV-----VAGFY-SGLESIHRFPD 403
Query: 500 EVPQ--------------EELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSD------ 539
EV + +EL R D R C+FTIDPSTA DLDDAL I LSD
Sbjct: 404 EVEESAKEEVYRANSAFLDELCWRTDFRPLCVFTIDPSTARDLDDALHIRSLSDKEIDEL 463
Query: 540 -------GISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGS 592
VGVHIADVSYFV P + LD+E+ R+T++Y++Q +PMLP +L EE+ S
Sbjct: 464 AQDGCPGATYEVGVHIADVSYFVRPNSPLDMESARRATTIYLVQLCVPMLPRILCEELCS 523
Query: 593 LNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLG 652
LN G D+ FS+ + ++ G+++ GR+VIRSC KLSYE+AQ +
Sbjct: 524 LNVGEDKRTFSVVFKVDKYGNILRSSFGRSVIRSCAKLSYENAQSV-------------- 569
Query: 653 EGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDE-YGTPYDS 711
G+ + F + ++ S L++++ + +RF+ G+LRL+ K F+ D+ P
Sbjct: 570 -GF--CFAAFSPAIII-SYFVLFQLAMQRRQRRFSGGSLRLDQIKTAFVLDDDKQIPLGV 625
Query: 712 VLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGL 771
+ + N+L EE+ML AN++ AE +A+ P++A LRRH P++ +L + G+
Sbjct: 626 APAICKPSNWLVEEWMLAANESVAERLAKELPETAFLRRHAPPSLNQLSKAADSLKSVGI 685
Query: 772 QLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYA 831
++T ++G S+++ + +L+ + + + ++ T+ M LA YFC G+ + HYA
Sbjct: 686 NVNTETAG----SIQERKAQLEQEARML-VAVSLLTKTMNLAEYFCLGELPKECTTEHYA 740
Query: 832 LAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE 863
L YTHFTSP+RRY D++VHR L A L E
Sbjct: 741 LNMEFYTHFTSPIRRYADVIVHRQLAAILARE 772
Score = 255 bits (651), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 220/817 (26%), Positives = 356/817 (43%), Gaps = 120/817 (14%)
Query: 212 QNRAVEGDFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSY 271
+N A GD V++++ +S W K+ ++ +S P N D + VS
Sbjct: 991 RNLAAHGDIVVVRILPISKW-KVSSYATSSP-------PALVNSFEEDADSVVPESTVSM 1042
Query: 272 EYSNCTLLSEKGIHHDDDSSSEAYNQEMIERE-GYNYINGHHPSTSDSTEKVSSSQQNDG 330
+ + + +E + S + + R + Y+ TS + D
Sbjct: 1043 DENLESEFAELPLPSKPASETNVRKHDCPSRYCHFFYLKTFGELTSGDSSAWPPGIPEDM 1102
Query: 331 MNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNR 390
++ A + P G+V+S+ +R+PRR ++G ++ + G +D
Sbjct: 1103 KPTDQKTIASMPRSSRLIPVGQVLSVAKRNPRRRRLLG--QISFFRPSSGRITRDTVPLD 1160
Query: 391 SSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEE 450
V D P +P + ++ +P+++ + G + + I WN
Sbjct: 1161 QDAPV-DDAICLFIPNSGSHPSVKIVPGGIPEAVLRNRALGLSPNYV----CEITGWNRR 1215
Query: 451 SPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVP--WEVPQEELLS 508
P + G E+E IL E + F PE L LP P + +P +E L
Sbjct: 1216 LNLPYGVISEQLGGMDELELATKQILIEYGLEDKDFLPEHLEGLPKDPDDFRIPSKEYLK 1275
Query: 509 RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVR 568
R+D R+ C+ +IDP++A D+DDAL I + + + VG+HIADVSYFV PGTALD EA R
Sbjct: 1276 RRDFRSCCVLSIDPASAKDIDDALHIRPIDNDLFEVGIHIADVSYFVKPGTALDREAADR 1335
Query: 569 STSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCC 628
+TSVY++QR IPMLP +LS + SL PG DRLAFS+ + ++G++VD W GRT+IRS
Sbjct: 1336 TTSVYLVQRVIPMLPAILSSHLCSLQPGADRLAFSVVMKIRTSGEIVDVWFGRTIIRSRT 1395
Query: 629 KLSYEHA---QDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKR 685
KLSY+ A + +D + E L + P+ F+ DV ++ +L ++++ L+ +R
Sbjct: 1396 KLSYDEALALMETVDLDSNSEKVKQLHKVIPKPEAPFKLEDVRDALTNLNKIARNLRKQR 1455
Query: 686 FTDGALRLENSK-----PVFLFDEYGTPYDSV----------------------LSGRED 718
GAL L+ +K P FD P+D + +
Sbjct: 1456 LQQGALTLQKAKIEFDLPSSTFDP--GPFDPIDPSNSAETSSTLDRTRWPRGYSVRSPGP 1513
Query: 719 LNFLFEEFMLLANKTAAEVIARAFPD--------------------SALLRRHPAPNMRK 758
+ L EE+ML AN+ A + +AF ALLRRH P +
Sbjct: 1514 SHQLIEEWMLAANQAVARRLFQAFVQHVSSCSKPTVIDQFRQDVWPGALLRRHEEPTKKN 1573
Query: 759 LREFEAF------CSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQL 812
L+E C + + + L +A ++ + D L + M++
Sbjct: 1574 LKELVLLRHLIIGCIPADVTKCCQALYDHSRKLIEAGHSEEERTAIMDALSHLVYVRMKM 1633
Query: 813 ASYFCSGDFK-----------DDTD------WGHYALAFPVYTHFTSPLRRYPDLVVHRT 855
A+YF D + D W HY L+ P+YTHFTSP+RRY DL+VHR
Sbjct: 1634 ATYFSLDDLTLINPEVLQSIPTNVDQLFEHTW-HYGLSVPLYTHFTSPIRRYADLLVHRQ 1692
Query: 856 LNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGV 915
L+A L + + R+ V + I + +ES + L AL+
Sbjct: 1693 LSAILHESE------------HQRDPVSQ--MGRIRKSRRLSESGRTNQPLPQLALQ--- 1735
Query: 916 PCADILVNVATHCNDRKLACRNVKDACVKLYMWILLK 952
A CN R++ R ++A +L++ L+
Sbjct: 1736 ---------AQWCNSRRMLSRRAQEASQRLFLTACLR 1763
>gi|355684007|gb|AER97261.1| DIS3 mitotic control-like protein [Mustela putorius furo]
Length = 881
Score = 281 bits (720), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 181/523 (34%), Positives = 267/523 (51%), Gaps = 65/523 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 406
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 264 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 300
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDAT-IEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ P++ R+E A+ +E + ID W S +P H + G
Sbjct: 301 DRRIPRI-------------RIETRQASALEGRRIIVAIDGWPRNSRYPNGHFVKNLGDV 347
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
G+ E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ C+ ++DP
Sbjct: 348 GDKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCVCSVDPPGC 407
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 408 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 467
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS + SL VDRLAFS W++N +++ ++ I S L+Y AQ ID
Sbjct: 468 LSSNLCSLRCNVDRLAFSCIWEMNHNAEILKVRFTKSAINSKASLTYAEAQMRID----- 522
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
S + + ++ S++ L +++KILK +R GAL L + + F D E
Sbjct: 523 --SAAMND------------EITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 568
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 569 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 628
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKD 823
L++ T ++ SL++A + + L+ ATR M A YFCSG
Sbjct: 629 AAKSKNLEIKTDTAKSLADSLDRADSPT---FPYLNTLLRILATRCMMQAVYFCSG---M 682
Query: 824 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
D D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 683 DNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTY 725
>gi|13446610|emb|CAC35051.1| putative exoribonuclease DIS3 [Drosophila melanogaster]
Length = 983
Score = 281 bits (720), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 206/710 (29%), Positives = 325/710 (45%), Gaps = 133/710 (18%)
Query: 160 FAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEGD 219
+ PH SM+ + E L + + ++ + N LE +E + +LI G + NRAV+GD
Sbjct: 232 YPPHLSMKELLEGLRQNKLLQGTFQASRENYLEGTVNVEKFEKGILIQGRESLNRAVDGD 291
Query: 220 FVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCTLL 279
V +++ + W+ P+E +L
Sbjct: 292 LVAVELLPEAEWSA----------------PSE------------------------IVL 311
Query: 280 SEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSA 339
EK ++ D+ S E + +N+ +N + +A
Sbjct: 312 EEKNVYADEVPSEE-----------------------------RAKDENEMLNQVR--AA 340
Query: 340 MISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDRE 399
+S+ T PTGR+V I+ R +W Y G + + D
Sbjct: 341 ALSAERT--PTGRIVGIVRR--------------KWRQYCGILQPSL--------IEDTN 376
Query: 400 YIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVL 459
P K P++ + + A ++ + + ID W S +P H +
Sbjct: 377 RHIFVPADRKIPRIRIETRQA------------AMLQNQRIIVTIDTWPRNSRYPHGHFV 424
Query: 460 HVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFT 519
G G++ + IL E+ + FS E LS LP +PW + E+ R DLR+ I +
Sbjct: 425 RSLGPLGDMATENEVILLEHDVPHCKFSDEVLSFLPKMPWTITDEDYSKRVDLRDLYICS 484
Query: 520 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQ-VRSTSVYMLQRK 578
+DP TD+DDAL L +G VGVHIADVS+F+ PG T+VY++ ++
Sbjct: 485 VDPPGCTDIDDALHCRELPNGNLEVGVHIADVSHFIRPGKRTGHGGSGPGETTVYLVGKR 544
Query: 579 IPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDI 638
I M+P LLS + SL GV+R AFS W++++ +V+ + ++VI+S ++YE AQ+I
Sbjct: 545 IDMVPELLSSNLCSLVGGVERFAFSCVWEVDNEANVLSKRFHKSVIKSKRAMTYEEAQNI 604
Query: 639 IDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKP 698
ID D N ++ +S+++L ++KILK +R +GAL L + +
Sbjct: 605 ID---DATQQN----------------EIAKSLRNLNRLAKILKKRRMDNGALVLASPEI 645
Query: 699 VFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMR 757
F D E P + + + N + EEFMLLAN T AE IA F + A+LRRHP P
Sbjct: 646 RFQVDSETHEPLEVEVKQMRETNSMVEEFMLLANITVAEHIATEFSECAVLRRHPRPPPT 705
Query: 758 KLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYF 816
G Q+D +S + SL++ +K D F+ +I TR M A YF
Sbjct: 706 NFDPLVKSARYQGFQVDINSGLELSHSLDKC---VKADNPYFNTMIRILTTRCMMQAVYF 762
Query: 817 CSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
SG + + ++ HY LA P+YTHFTSP+RRY D++VHR L A++ A+ Y
Sbjct: 763 ISGSLQKE-EFFHYGLAAPIYTHFTSPIRRYSDIMVHRLLAASIGADSTY 811
>gi|148694119|gb|EDL26066.1| expressed sequence AV340375, isoform CRA_c [Mus musculus]
Length = 1023
Score = 281 bits (720), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 181/522 (34%), Positives = 282/522 (54%), Gaps = 38/522 (7%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 300 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 342
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK I+ ++ +A + +V RID W S +P H + V GR G++
Sbjct: 343 RIPK-----------IRISTQQAEALQDFRVVV-RIDSWEATSVYPNGHFVRVLGRIGDL 390
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLRN-FCIFTIDPS 523
E +I IL EN+I FS + +P PW+V +E RKDLR +F+IDP
Sbjct: 391 EGEIATILVENSISVVPFSEAQMCEMPVNTPENPWKVSPKEEQERKDLRTTHLVFSIDPK 450
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
D+DD LS+ L +G +GVHIADV++FV P + +D+EA+ R+T+ Y+ R+ MLP
Sbjct: 451 GCEDVDDTLSVRTLDNGNLELGVHIADVTHFVAPNSYIDVEARTRATTYYLADRRYDMLP 510
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLN-SAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
+LS ++ SL GVDR A S+ W+L+ ++ ++ W GRT+IRS KL YE AQ+++DG
Sbjct: 511 SILSADLCSLLGGVDRYAVSVMWELDKTSYEIKKVWYGRTIIRSAYKLFYEAAQELLDGN 570
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
F + + + Q + ++V +I L ++++ ++ KR GAL LE +
Sbjct: 571 FSIVDDIPELKALDKQSQQAKLEELVWAIGKLTDIARHIRAKRDRCGALELEGVEVRVQL 630
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
D+ +D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 631 DDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 690
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
G +DT S+ SL+ A + D ++ +L + AT+ M A YF +G
Sbjct: 691 RECAKAKGFFIDTRSNKTLADSLDSAND--PKDPLVNKLLRSMATQAMSNALYFSTGSCA 748
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ +K
Sbjct: 749 EE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDK 789
Score = 44.7 bits (104), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 25/126 (19%)
Query: 114 LLLATDLCGSIISRSCPEPIANDSSCWAYTNKDDNPSHQSEARCKIFAPHWSMEAVNEAL 173
L A DLC SI+ ++ + + E K + H +E + +
Sbjct: 166 LKAAHDLCDSILQ-----------------SRRERETESQETHGKEYPEHLPLEVLEAGI 208
Query: 174 EKGDAFKALYRVNAHN-RLEAYCKIEGVQT-------DVLITGIAAQNRAVEGDFVLIKV 225
+ G + + VN H ++EA+ ++ G + D+LI G A+NR++ GD V++++
Sbjct: 209 KSGRYIQGILNVNKHRAQIEAFVRLHGASSKDSGLVSDILIHGSKARNRSIHGDVVVVEM 268
Query: 226 DRLSLW 231
S W
Sbjct: 269 LPKSEW 274
>gi|148694118|gb|EDL26065.1| expressed sequence AV340375, isoform CRA_b [Mus musculus]
Length = 1053
Score = 281 bits (720), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 181/522 (34%), Positives = 282/522 (54%), Gaps = 38/522 (7%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 330 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 372
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK I+ ++ +A + +V RID W S +P H + V GR G++
Sbjct: 373 RIPK-----------IRISTQQAEALQDFRVVV-RIDSWEATSVYPNGHFVRVLGRIGDL 420
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLRN-FCIFTIDPS 523
E +I IL EN+I FS + +P PW+V +E RKDLR +F+IDP
Sbjct: 421 EGEIATILVENSISVVPFSEAQMCEMPVNTPENPWKVSPKEEQERKDLRTTHLVFSIDPK 480
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
D+DD LS+ L +G +GVHIADV++FV P + +D+EA+ R+T+ Y+ R+ MLP
Sbjct: 481 GCEDVDDTLSVRTLDNGNLELGVHIADVTHFVAPNSYIDVEARTRATTYYLADRRYDMLP 540
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLN-SAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
+LS ++ SL GVDR A S+ W+L+ ++ ++ W GRT+IRS KL YE AQ+++DG
Sbjct: 541 SILSADLCSLLGGVDRYAVSVMWELDKTSYEIKKVWYGRTIIRSAYKLFYEAAQELLDGN 600
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
F + + + Q + ++V +I L ++++ ++ KR GAL LE +
Sbjct: 601 FSIVDDIPELKALDKQSQQAKLEELVWAIGKLTDIARHIRAKRDRCGALELEGVEVRVQL 660
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
D+ +D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 661 DDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 720
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
G +DT S+ SL+ A + D ++ +L + AT+ M A YF +G
Sbjct: 721 RECAKAKGFFIDTRSNKTLADSLDSAND--PKDPLVNKLLRSMATQAMSNALYFSTGSCA 778
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ +K
Sbjct: 779 EE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDK 819
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 25/126 (19%)
Query: 114 LLLATDLCGSIISRSCPEPIANDSSCWAYTNKDDNPSHQSEARCKIFAPHWSMEAVNEAL 173
L A DLC SI+ ++ + + E K + H +E + +
Sbjct: 196 LKAAHDLCDSILQ-----------------SRRERETESQETHGKEYPEHLPLEVLEAGI 238
Query: 174 EKGDAFKALYRVNAHN-RLEAYCKIEGVQT-------DVLITGIAAQNRAVEGDFVLIKV 225
+ G + + VN H ++EA+ ++ G + D+LI G A+NR++ GD V++++
Sbjct: 239 KSGRYIQGILNVNKHRAQIEAFVRLHGASSKDSGLVSDILIHGSKARNRSIHGDVVVVEM 298
Query: 226 DRLSLW 231
S W
Sbjct: 299 LPKSEW 304
>gi|281347338|gb|EFB22922.1| hypothetical protein PANDA_002191 [Ailuropoda melanoleuca]
Length = 955
Score = 281 bits (720), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 182/522 (34%), Positives = 279/522 (53%), Gaps = 38/522 (7%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTGRVV I++++ RD +V F + KG + K + + I +TP
Sbjct: 233 PTGRVVGILQKN-WRDYVVTFPS-------KGEVQSQGK---------NAQKILVTPWDY 275
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK I+ ++ +A + +V RID W S +P H + V GR G++
Sbjct: 276 RIPK-----------IRISTQQAEALQDFRVVV-RIDSWESTSVYPNGHFVRVLGRIGDL 323
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLR-NFCIFTIDPS 523
E +I IL EN+I FS + +P PW+V EE RKDLR +F+IDP
Sbjct: 324 EGEIATILVENSISVVPFSEAQMCEMPVNTPGNPWKVSPEEERERKDLRETHLVFSIDPK 383
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
D+DD LS+ L++G +GVHIADV++FV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 384 GCEDVDDTLSVRTLANGNLELGVHIADVTHFVPPNSYIDIEARTRATTYYLADRRYDMLP 443
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLN-SAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
+LS ++ SL GV R A S+ W+L+ ++ ++ W GRT+IRS KL YE AQ+++DG
Sbjct: 444 SVLSADLCSLLGGVHRYAVSVIWELDKTSYEIKKVWYGRTIIRSAYKLFYEAAQELLDGN 503
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
F + Q + ++V +I L ++++ ++ KR GAL LE +
Sbjct: 504 FHAVDDIPEFRDLDERSRQAKLEELVWAIGKLTDIARHIRAKRDRCGALELEGVEIRVQL 563
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
DE +D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 564 DEKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 623
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
G +DT S+ SL+ A + +D ++ +L + AT+ M A YF +G
Sbjct: 624 RECAKAKGFFIDTRSNKTLADSLDNAND--PNDPIVNRLLRSMATQAMSNALYFSTGSCA 681
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ +K
Sbjct: 682 EE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDK 722
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 48/86 (55%), Gaps = 8/86 (9%)
Query: 154 EARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHN-RLEAY-------CKIEGVQTDVL 205
E+ K +A H +E + ++ G + + VN H ++EA+ CK G+ +D+L
Sbjct: 122 ESHGKEYAEHLPLEVLEAGIKSGRYIQGILNVNKHRAQMEAFVRLQGASCKDSGLVSDIL 181
Query: 206 ITGIAAQNRAVEGDFVLIKVDRLSLW 231
I G+ A+NR++ GD V++++ + W
Sbjct: 182 IHGMKARNRSIHGDVVVVELLSKNEW 207
>gi|301756943|ref|XP_002914328.1| PREDICTED: DIS3-like exonuclease 1-like [Ailuropoda melanoleuca]
Length = 1046
Score = 281 bits (720), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 182/522 (34%), Positives = 279/522 (53%), Gaps = 38/522 (7%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTGRVV I++++ RD +V F + KG + K + + I +TP
Sbjct: 322 PTGRVVGILQKN-WRDYVVTFPS-------KGEVQSQGK---------NAQKILVTPWDY 364
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK I+ ++ +A + +V RID W S +P H + V GR G++
Sbjct: 365 RIPK-----------IRISTQQAEALQDFRVVV-RIDSWESTSVYPNGHFVRVLGRIGDL 412
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLR-NFCIFTIDPS 523
E +I IL EN+I FS + +P PW+V EE RKDLR +F+IDP
Sbjct: 413 EGEIATILVENSISVVPFSEAQMCEMPVNTPGNPWKVSPEEERERKDLRETHLVFSIDPK 472
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
D+DD LS+ L++G +GVHIADV++FV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 473 GCEDVDDTLSVRTLANGNLELGVHIADVTHFVPPNSYIDIEARTRATTYYLADRRYDMLP 532
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLN-SAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
+LS ++ SL GV R A S+ W+L+ ++ ++ W GRT+IRS KL YE AQ+++DG
Sbjct: 533 SVLSADLCSLLGGVHRYAVSVIWELDKTSYEIKKVWYGRTIIRSAYKLFYEAAQELLDGN 592
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
F + Q + ++V +I L ++++ ++ KR GAL LE +
Sbjct: 593 FHAVDDIPEFRDLDERSRQAKLEELVWAIGKLTDIARHIRAKRDRCGALELEGVEIRVQL 652
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
DE +D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 653 DEKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 712
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
G +DT S+ SL+ A + +D ++ +L + AT+ M A YF +G
Sbjct: 713 RECAKAKGFFIDTRSNKTLADSLDNAND--PNDPIVNRLLRSMATQAMSNALYFSTGSCA 770
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ +K
Sbjct: 771 EE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDK 811
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 48/86 (55%), Gaps = 8/86 (9%)
Query: 154 EARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHN-RLEAY-------CKIEGVQTDVL 205
E+ K +A H +E + ++ G + + VN H ++EA+ CK G+ +D+L
Sbjct: 211 ESHGKEYAEHLPLEVLEAGIKSGRYIQGILNVNKHRAQMEAFVRLQGASCKDSGLVSDIL 270
Query: 206 ITGIAAQNRAVEGDFVLIKVDRLSLW 231
I G+ A+NR++ GD V++++ + W
Sbjct: 271 IHGMKARNRSIHGDVVVVELLSKNEW 296
>gi|342185942|emb|CCC95427.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 870
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 208/640 (32%), Positives = 316/640 (49%), Gaps = 60/640 (9%)
Query: 322 VSSSQQNDGMNAIERLSAMISS-----YPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWF 376
V S+++ G N L+ + + + KRP+GRVV +I+R V +
Sbjct: 111 VRDSREDGGRNLEVHLAKAMGAPAEYRWGNKRPSGRVVKVIQRKQ------ALTVVARLA 164
Query: 377 NYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIE 436
+ G R+ + NR Y + + +P + V +D+P + + +++ ++
Sbjct: 165 DGALGPREPIQDNR---------YYRFKVYNELFPHIAVYGRDIPSCLYEAIDKQMYILQ 215
Query: 437 MELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC 496
+ W ++ FP A V V G VE AI + I FS E+ +C+P
Sbjct: 216 LSTQPNGDFVWKDDR-FPLAKVTRVVGSVESVESNTYAICTAHDIPMCDFSEEAYACVPD 274
Query: 497 VPWEVPQEELLSR---KDLRNF-CIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVS 552
+ +P E + R +DLR+ + +IDPSTA DLDDALSI L G RVGVHIADVS
Sbjct: 275 T-FVIPDAEEMKRTHRRDLRSEEFVCSIDPSTARDLDDALSITALPGGY-RVGVHIADVS 332
Query: 553 YFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAG 612
+FV PG+ALD EA+ R+TSVY++ R IPMLP LSE+ SL+PG D+LAFS + +
Sbjct: 333 HFVQPGSALDEEARTRATSVYLVDRVIPMLPRRLSEDYCSLHPGSDKLAFSAIFQFDHHA 392
Query: 613 DVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIK 672
++ W G+++IR+ C+LSY+ AQ IIDG V + G+ + S++
Sbjct: 393 NLKGEWFGKSLIRNRCRLSYDDAQRIIDGDDAVLDTLDYGDARDAQELVSLKARTATSVR 452
Query: 673 SLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGT---PYDSVLSGREDLNFLFEEFMLL 729
+L+E++ L+ G + + ++K F F++ P + + + N+L EEFMLL
Sbjct: 453 TLFELATKLRSASIKRGRVTISSAKISFHFEDAMNATHPIGFDIKRQIEANWLVEEFMLL 512
Query: 730 ANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQ-A 788
AN AE I PD LLR HP+P R + S+ G+ L SS + Q ++
Sbjct: 513 ANARVAEKIIEYSPDQGLLRTHPSPPQRTFVALKRILSRAGIDLTGRSSHAYQQVTDKIC 572
Query: 789 REKLKDDYVLFDILINYATRPMQLASYFCSGDFK-DDTDWGHYALAFPVYTHFTSPLRRY 847
L+D+ L+ Y + LA Y +GD T H+ALA YTHFTSP+RRY
Sbjct: 573 DHPLRDE---LSALMKYG---LTLAKYVANGDTGLGTTSRRHFALALEWYTHFTSPIRRY 626
Query: 848 PDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALS 907
D++VHR L ALE E + +G RG + L+ R
Sbjct: 627 ADIIVHRQLLCALEIESIV-------------KGSRGSRAHPVEPGSVEVSDLQTR---- 669
Query: 908 VAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYM 947
+ P +++ N+ CN +KL RNV DA L++
Sbjct: 670 ----PFFTPTVEMM-NIVEECNAKKLLARNVSDASSALFL 704
>gi|166201905|sp|Q5U2P0.2|DI3L1_RAT RecName: Full=DIS3-like exonuclease 1
gi|149041955|gb|EDL95796.1| similar to expressed sequence AV340375, isoform CRA_c [Rattus
norvegicus]
Length = 1054
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 185/526 (35%), Positives = 287/526 (54%), Gaps = 46/526 (8%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 330 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 372
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK I+ ++ +A + +V RID W S +P H + V GR G++
Sbjct: 373 RIPK-----------IRISTQQAEALQDFRVVV-RIDSWETTSVYPNGHFVRVLGRIGDL 420
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLRN-FCIFTIDPS 523
E +I IL EN+I FS + +P PW+V +E R+DLR+ +F+IDP
Sbjct: 421 EGEIATILVENSINVVPFSEAQMCEMPVNTAENPWKVSPKEEQERRDLRSTHLVFSIDPK 480
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
D+DDALS+ L++G +GVHIADV++FV P + +D+EA+ R+T+ Y+ R+ MLP
Sbjct: 481 GCEDVDDALSVRTLNNGNLELGVHIADVTHFVAPNSYIDVEARTRATTYYLADRRYDMLP 540
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLN-SAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
+LS ++ SL GVDR A S+ W+L+ ++ ++ W GRT+IRS KL YE AQ+++DG
Sbjct: 541 SILSADLCSLLGGVDRYAVSVMWELDKTSYEIKKVWYGRTIIRSAYKLFYEAAQELLDGN 600
Query: 643 F----DVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKP 698
F D+ TL E Q + ++V +I L ++++ ++ KR GAL LE +
Sbjct: 601 FSIVDDIPEFKTLEEQ----NRQAKLEELVWAIGKLTDIARHIRAKRDRCGALELEGVEV 656
Query: 699 VFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRK 758
D+ +D + +++ E M+LAN A+ I +FP ALLR+HP P+
Sbjct: 657 RVQLDDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEF 716
Query: 759 LREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCS 818
E G +DT S+ SL+ A + D ++ +L + AT+ M A YF +
Sbjct: 717 FSELRECAKAKGFFIDTRSNKTLADSLDSAND--PSDPLVNKLLRSMATQAMSNALYFST 774
Query: 819 GDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
G ++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ +K
Sbjct: 775 GSCAEE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDK 819
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 57/126 (45%), Gaps = 25/126 (19%)
Query: 114 LLLATDLCGSIISRSCPEPIANDSSCWAYTNKDDNPSHQSEARCKIFAPHWSMEAVNEAL 173
L A +LC SII ++ + S E K + H +E + +
Sbjct: 196 LKAAHELCDSIIQ-----------------SRRERESESQETHGKEYPEHLPLEVLEAGI 238
Query: 174 EKGDAFKALYRVNAHN-RLEAYCKIEGVQT-------DVLITGIAAQNRAVEGDFVLIKV 225
+ G + + VN H ++EA+ +++G + D+LI G A+NR++ GD V++++
Sbjct: 239 KSGRYIQGILNVNKHRAQIEAFVRLQGASSKDSGLVSDILIHGSKARNRSIHGDVVVVEL 298
Query: 226 DRLSLW 231
S W
Sbjct: 299 LPKSEW 304
>gi|156553452|ref|XP_001601829.1| PREDICTED: exosome complex exonuclease RRP44-like [Nasonia
vitripennis]
Length = 985
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 181/524 (34%), Positives = 272/524 (51%), Gaps = 63/524 (12%)
Query: 347 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDA-KKNRSSLSVPDREYIQLTP 405
K PTGR+V II R +W Y G ++ A K+N L VP
Sbjct: 333 KTPTGRIVGIIRR--------------KWRQYCGILQRSALKENTRHLFVP--------- 369
Query: 406 THPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGR 464
K PK+ R+E A T+ + + ID W S +P H + G
Sbjct: 370 AERKIPKV-------------RIETRQAETLSKQRIIVAIDSWPRNSRYPLGHFVRALGE 416
Query: 465 GGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPST 524
G+ + + +L E+ + S FS E LS LP +PW + + ++ R+DLR+ + ++DP
Sbjct: 417 IGDKDTENEVLLLEHDVPHSRFSDEVLSFLPKLPWVITESDVAQRRDLRHIDVCSVDPPG 476
Query: 525 ATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPV 584
TD+DDAL L +G VGVHIADVS+F+ PGTALD EA +R+T+VY++ ++I M+P
Sbjct: 477 CTDIDDALHCRDLPNGNLEVGVHIADVSHFIRPGTALDKEAALRATTVYLVDKRIDMVPE 536
Query: 585 LLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFD 644
LLS + SL +R AFS W+++ +++ +++I S ++YE AQ ID K
Sbjct: 537 LLSSNLCSLRGNEERFAFSCVWEIDHEANIISIDYFKSIILSRAAMTYEEAQLKIDDKTQ 596
Query: 645 VESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD- 703
++ V +S+++L ++K LK +R +GAL L + + F D
Sbjct: 597 NDA-------------------VAKSLRNLNMLAKKLKKRRLENGALVLASPEIRFQVDS 637
Query: 704 EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFE 763
E P D + N + EEFMLLAN + A+ I FP+ A+LRRHP P
Sbjct: 638 ETHDPIDVQAKQMRETNSMVEEFMLLANISVAKKILEEFPECAMLRRHPEPPQVNFDPLI 697
Query: 764 AFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFK 822
G +++TSS + +SLE A+ K++ F+ ++ ATR M A YF SG
Sbjct: 698 KAGRHQGFEINTSSGKELAKSLEAAQ---KENNPYFNTMLKILATRCMMQAVYFTSG-MV 753
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
+T++ HY LA P+YTHFTSP+RRY D++VHR L + A+ Y
Sbjct: 754 QETEFFHYGLACPIYTHFTSPIRRYADVIVHRLLAVCVGADATY 797
Score = 41.6 bits (96), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%)
Query: 154 EARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQN 213
E R +F H S ++E ++ G + + + N LE E ++ VL+ G N
Sbjct: 219 EGREPLFPCHLSPSQLHEGIKNGKFLQGTFLASRENFLEGSVNCESIEKFVLVQGREGLN 278
Query: 214 RAVEGDFVLIKVDRLSLWA 232
RAV+GD V I++ W+
Sbjct: 279 RAVDGDTVAIELLPEDQWS 297
>gi|344293423|ref|XP_003418422.1| PREDICTED: DIS3-like exonuclease 1-like [Loxodonta africana]
Length = 1054
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 183/522 (35%), Positives = 282/522 (54%), Gaps = 38/522 (7%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 330 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 372
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK I+ ++ +A + +V RID W S +P H + V G+ ++
Sbjct: 373 RIPK-----------IRISTQQAEALQDFRVVV-RIDSWESTSVYPNGHFVRVLGKIRDL 420
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLR-NFCIFTIDPS 523
E +I IL EN+I FS + +P PW+V EE RKDLR +F+IDP
Sbjct: 421 EGEIATILVENSISVVPFSEAQMCKMPVNTPENPWKVSPEEERERKDLRKTHLVFSIDPK 480
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
D+DD LS+ L++G +GVHIADV++FV P + +D EA+ R+T+ Y+ R+ MLP
Sbjct: 481 GCEDVDDTLSVRTLNNGNLELGVHIADVTHFVAPNSYIDTEARTRATTYYLADRRYDMLP 540
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
+LS ++ SL GVDR A S+ W+L++ +V W GRT+IRS KL YE AQ+++DG
Sbjct: 541 SILSADLCSLLGGVDRYAVSVMWELDATSYEVKKVWYGRTIIRSTYKLFYEAAQELLDGN 600
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
F V + + Q + ++V +I L ++++ ++ KR GAL LE +
Sbjct: 601 FSVIEDIPEFKDLDEKSRQAKLEELVWAIGKLTDIARHVRAKRDRCGALELEGVEVRVQL 660
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
DE +D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 661 DEQKNIHDLIPKEPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 720
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
G +DT S+ +SL++A + D ++ +L + AT+ M A YF +G
Sbjct: 721 RECAKAKGFSIDTRSNKTLAESLDKAND--PSDPIVNRLLRSMATQAMSNALYFSTGSCA 778
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ +K
Sbjct: 779 EE-EFRHYGLALDKYTHFTSPIRRYSDIVVHRLLLAAISKDK 819
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 42/76 (55%), Gaps = 8/76 (10%)
Query: 154 EARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHN-RLEAYCKIEGVQT-------DVL 205
E+R K + H +E + ++ G + + VN H ++EA+ +++G + D+L
Sbjct: 219 ESRGKEYPEHLPLEVLEAGIKSGRYIQGILNVNKHRAQMEAFVRLQGASSKDSDLVSDIL 278
Query: 206 ITGIAAQNRAVEGDFV 221
I G+ A+NR++ GD V
Sbjct: 279 IHGMKARNRSIHGDVV 294
>gi|452848354|gb|EME50286.1| hypothetical protein DOTSEDRAFT_145035 [Dothistroma septosporum
NZE10]
Length = 991
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 224/726 (30%), Positives = 332/726 (45%), Gaps = 130/726 (17%)
Query: 154 EARCKIFAPHW-SMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQ 212
+A+ ++ P + SM A+ + GD + ++ V+ +N LE + ++I G
Sbjct: 247 DAKAELLYPDYMSMSAMLTGIRAGDLHQGVFNVSPYNYLEGTVHVPAFDKSLIIQGRENS 306
Query: 213 NRAVEGDFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYE 272
NRAV GD V+++V + W + ++ ++E+ ++ N
Sbjct: 307 NRAVSGDIVVLEVLPKNQWK-----APSTKVIEEEDVGKNENA----------------- 344
Query: 273 YSNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMN 332
+DD S+E + E+EG + KV+ +
Sbjct: 345 -------------ENDDESAEGI---ITEQEG----KALREQVKHAHGKVAEGK------ 378
Query: 333 AIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSS 392
+PT RVV +++R+ R+ VG ++ K R AK++R+
Sbjct: 379 --------------PQPTARVVGVVKRNWRQ--YVGHID-------KDSVRSGAKQSRA- 414
Query: 393 LSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESP 452
++ + L P + PK+ V + D + KR V ID W+ ES
Sbjct: 415 -----QQTVFLIPMDKRIPKVRVRTRQAGDLLGKR------------VLVTIDSWDRESR 457
Query: 453 FPQAHVLHVFG----RGGEVEPQINAILYENAICCSGFSPESLSCLPC------VPWEVP 502
+P H + G +G E E A+L E + F L CLP VP ++
Sbjct: 458 YPVGHFIRSLGELETKGAETE----ALLLEWDVQYRPFPKSVLDCLPAEGHDWRVPVDMS 513
Query: 503 QEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALD 562
R+DLR I +IDP D+DDAL ++L +G VGVHIADVS+FV P A+D
Sbjct: 514 DSGWRGRRDLREQLICSIDPPGCVDIDDALHAKQLPNGNFEVGVHIADVSHFVKPNNAMD 573
Query: 563 IEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRT 622
EA +R T+VY++ ++I MLP+LL ++ SL P V+R AFS+ W+L+ ++V ++
Sbjct: 574 KEASLRGTTVYLVDKRIDMLPMLLGTDLCSLKPYVERYAFSVLWELDQNANIVSASFTKS 633
Query: 623 VIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILK 682
VI+S SYE AQ ID K + D+ ++ L +SK L+
Sbjct: 634 VIKSREAFSYEQAQLRIDDK-------------------SQQDDLTNGMRHLMMLSKKLR 674
Query: 683 DKRFTDGALRLENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARA 741
KR GAL L + + V E P D D N L EEFMLLAN + A A
Sbjct: 675 AKRMAAGALNLASPEVRVETESETSDPVDVKTKQLLDTNQLVEEFMLLANISVAGKNYAA 734
Query: 742 FPDSALLRRHPAPNMRKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFD 800
FP +ALLRRH AP E K GL+L T SS SL+ + + F+
Sbjct: 735 FPQTALLRRHAAPPKNNFEELSNQLKVKKGLELRTDSSKALADSLDTCTDA---ESPFFN 791
Query: 801 ILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAA 859
L+ ATR M A YFCSG + ++ HY LA +YTHFTSP+RRY DL HR L AA
Sbjct: 792 TLVRILATRCMMSAEYFCSGT-QAYPEFRHYGLASGIYTHFTSPIRRYADLEAHRQLAAA 850
Query: 860 LEAEKL 865
+E E L
Sbjct: 851 IEYEPL 856
>gi|332235944|ref|XP_003267165.1| PREDICTED: DIS3-like exonuclease 1 isoform 1 [Nomascus leucogenys]
Length = 1054
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 184/522 (35%), Positives = 279/522 (53%), Gaps = 38/522 (7%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 330 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 372
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK+ + + T++ V RID W S +P H + V GR G++
Sbjct: 373 RIPKIRISTQQA------------ETLQDFRVVVRIDSWESTSVYPNGHFVRVLGRIGDL 420
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLR-NFCIFTIDPS 523
E +I IL EN I FS + +P PW+V EE RKDLR + +F+IDP
Sbjct: 421 EGEIATILVENNISVIPFSEAQMCEMPVNTPENPWKVSPEEEQKRKDLRKSHLVFSIDPK 480
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
D+DD LS+ L++G +GVHIADV++FV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 481 GCEDVDDTLSVRTLNNGNLELGVHIADVTHFVAPNSYIDIEARTRATTYYLADRRYDMLP 540
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
+LS ++ SL GVDR A SI W+L+ A ++ W GRT+IRS KL YE AQ+++DG
Sbjct: 541 SVLSADLCSLLGGVDRYAVSIMWELDKASYEIKKVWYGRTIIRSAYKLFYEAAQELLDGN 600
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
V + + Q + ++V +I L ++++ ++ KR GAL LE +
Sbjct: 601 LSVVDDIPEFKDLDEKSRQAKLEELVWAIGKLTDIARHVRAKRDGCGALELEGVEVRVQL 660
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
D+ +D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 661 DDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 720
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
G +DT S+ SL+ A + D ++ +L + AT+ M A YF +G
Sbjct: 721 RECAKAKGFFIDTRSNKTLADSLDNAND--PHDPIVNRLLRSMATQAMSNALYFSTGSCA 778
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ +K
Sbjct: 779 EE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDK 819
Score = 45.1 bits (105), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 45/80 (56%), Gaps = 8/80 (10%)
Query: 154 EARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHN-RLEAYCKIEGVQT-------DVL 205
E+ K + H +E + ++ G + + VN H ++EA+ +++G + D+L
Sbjct: 219 ESHGKEYPEHLPLEVLEAGIKSGRYIQGILNVNKHRAQIEAFVRLQGASSKDSDLVSDIL 278
Query: 206 ITGIAAQNRAVEGDFVLIKV 225
I G+ A+NR++ GD V++++
Sbjct: 279 IHGMKARNRSIHGDVVVVEL 298
>gi|27369724|ref|NP_766107.1| DIS3-like exonuclease 1 isoform 2 [Mus musculus]
gi|295293142|ref|NP_001171255.1| DIS3-like exonuclease 1 isoform 2 [Mus musculus]
gi|26325912|dbj|BAC26710.1| unnamed protein product [Mus musculus]
gi|34785201|gb|AAH56939.1| DIS3 mitotic control homolog (S. cerevisiae)-like [Mus musculus]
Length = 970
Score = 281 bits (718), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 181/522 (34%), Positives = 282/522 (54%), Gaps = 38/522 (7%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 247 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 289
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK I+ ++ +A + +V RID W S +P H + V GR G++
Sbjct: 290 RIPK-----------IRISTQQAEALQDFRVVV-RIDSWEATSVYPNGHFVRVLGRIGDL 337
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLRN-FCIFTIDPS 523
E +I IL EN+I FS + +P PW+V +E RKDLR +F+IDP
Sbjct: 338 EGEIATILVENSISVVPFSEAQMCEMPVNTPENPWKVSPKEEQERKDLRTTHLVFSIDPK 397
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
D+DD LS+ L++G +GVHIADV++FV P + +D+EA+ R+T+ Y+ R+ MLP
Sbjct: 398 GCEDVDDTLSVRTLNNGNLELGVHIADVTHFVAPNSYIDVEARTRATTYYLADRRYDMLP 457
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLN-SAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
+LS ++ SL GVDR A S+ W+L+ ++ ++ W GRT+IRS KL YE AQ+++DG
Sbjct: 458 SILSADLCSLLGGVDRYAVSVMWELDKTSYEIKKVWYGRTIIRSAYKLFYEAAQELLDGN 517
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
F + + + Q + ++V +I L ++++ ++ KR GAL LE +
Sbjct: 518 FSIVDDIPELKALDKQSQQAKLEELVWAIGKLTDIARHIRAKRDRCGALELEGVEVRVQL 577
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
D+ D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 578 DDKKNIRDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 637
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
G +DT S+ SL+ A + D ++ +L + AT+ M A YF +G
Sbjct: 638 RECAKAKGFFIDTRSNKTLADSLDSAND--PKDPLVNKLLRSMATQAMSNALYFSTGSCA 695
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ +K
Sbjct: 696 EE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDK 736
Score = 44.7 bits (104), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 25/126 (19%)
Query: 114 LLLATDLCGSIISRSCPEPIANDSSCWAYTNKDDNPSHQSEARCKIFAPHWSMEAVNEAL 173
L A DLC SI+ ++ + + E K + H +E + +
Sbjct: 113 LKAAHDLCDSILQ-----------------SRRERETESQETHGKEYPEHLPLEVLEAGI 155
Query: 174 EKGDAFKALYRVNAHN-RLEAYCKIEGVQT-------DVLITGIAAQNRAVEGDFVLIKV 225
+ G + + VN H ++EA+ ++ G + D+LI G A+NR++ GD V++++
Sbjct: 156 KSGRYIQGILNVNKHRAQIEAFVRLHGASSKDSGLVSDILIHGSKARNRSIHGDVVVVEM 215
Query: 226 DRLSLW 231
S W
Sbjct: 216 LPKSEW 221
>gi|270012315|gb|EFA08763.1| hypothetical protein TcasGA2_TC006450 [Tribolium castaneum]
Length = 951
Score = 281 bits (718), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 197/595 (33%), Positives = 286/595 (48%), Gaps = 87/595 (14%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 407
+PTGRVV II R R+ G L +GG D Y P
Sbjct: 326 KPTGRVVGIIRRKWRQ--YCGIL--------QGGI--------------DGVYQMFVPAD 361
Query: 408 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 467
PK+ I+ R E + + + ID W + S +P H + G G+
Sbjct: 362 KSIPKI---------KIETRQAE---FLRTQKLIVTIDSWPKHSRYPHGHFVRALGNIGD 409
Query: 468 VEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATD 527
+ IL E+ + S FS E L+CLP +PW + +++ R DLR+ I ++DP TD
Sbjct: 410 QTTENEVILLEHDVPHSQFSEEVLNCLPKMPWIITDDDVKKRVDLRHLDICSVDPPGCTD 469
Query: 528 LDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLS 587
+DDAL L+DG VGVHIADVS+F+ PGT LD EA R+T+VY++ +I M+P LLS
Sbjct: 470 IDDALHCRPLADGKLEVGVHIADVSHFIRPGTPLDREAASRATTVYLVNNRIDMVPALLS 529
Query: 588 EEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVES 647
+ SL G +R AFS W+++ +++ +++I+S ++YE AQ IID K
Sbjct: 530 SNLCSLRGGEERFAFSCIWEMDQNANILSTRFHKSIIKSRKAMTYEEAQLIIDDK---TK 586
Query: 648 SNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYG 706
+ L E +++SL +++KI+K +R +GAL L + + D E
Sbjct: 587 QDALAE----------------ALRSLNKLAKIMKQRRLVNGALVLASPEVKIQMDSETM 630
Query: 707 TPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFC 766
P D + + N + EEFML AN + AE I FPD A+LRRHP P
Sbjct: 631 EPLDVEVKKLFETNSMIEEFMLQANISVAEKILEEFPDCAMLRRHPVPPATNFDPLVKAG 690
Query: 767 SKHGLQLDTSSSGQFHQSLEQAREKLKDDYV--LFDILINYATRPMQLASYFCSGDFKDD 824
G ++ S +SL++A K+ Y+ +F IL ATR M A YF SG ++ +
Sbjct: 691 RHLGFEIRVDSGKNLAKSLDEAVNT-KNPYLNTMFRIL---ATRCMLQAVYFVSGTYQKE 746
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHRE---- 880
++ HY LA P+YTHFTSP+RRY D++VHR L A+ Y +L KN E
Sbjct: 747 -EYFHYGLAVPLYTHFTSPIRRYADIIVHRLLAVICGADSTYPD---LLDKNKTTELCQN 802
Query: 881 -GVRGR----------------FLTGIFYDKDAAESLEGREALSVAALKYGVPCA 918
R R F G D++ + AL V +YG+ C
Sbjct: 803 LNYRNRMAQYAGRASIAFNTHLFFKGKLQDEEGYVLYVRKNALQVLIPRYGLECT 857
Score = 40.0 bits (92), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 40/82 (48%)
Query: 151 HQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIA 210
H ++ +F H S + + +G + +R + N LE + ++ + V++ G A
Sbjct: 207 HGNDFTKDVFPNHLSNVELLTGIREGKLLQGTFRASRDNFLEGFVNVDSYEEPVIVQGRA 266
Query: 211 AQNRAVEGDFVLIKVDRLSLWA 232
NR+V+GD V +++ + W
Sbjct: 267 GLNRSVDGDTVAVELLKEEEWV 288
>gi|91088779|ref|XP_967442.1| PREDICTED: similar to SD10981p [Tribolium castaneum]
Length = 943
Score = 281 bits (718), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 198/595 (33%), Positives = 289/595 (48%), Gaps = 87/595 (14%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 407
+PTGRVV II R R+ G L +GG D Y P
Sbjct: 318 KPTGRVVGIIRRKWRQ--YCGIL--------QGGI--------------DGVYQMFVPAD 353
Query: 408 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 467
PK+ I+ R E + + + ID W + S +P H + G G+
Sbjct: 354 KSIPKI---------KIETRQAE---FLRTQKLIVTIDSWPKHSRYPHGHFVRALGNIGD 401
Query: 468 VEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATD 527
+ IL E+ + S FS E L+CLP +PW + +++ R DLR+ I ++DP TD
Sbjct: 402 QTTENEVILLEHDVPHSQFSEEVLNCLPKMPWIITDDDVKKRVDLRHLDICSVDPPGCTD 461
Query: 528 LDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLS 587
+DDAL L+DG VGVHIADVS+F+ PGT LD EA R+T+VY++ +I M+P LLS
Sbjct: 462 IDDALHCRPLADGKLEVGVHIADVSHFIRPGTPLDREAASRATTVYLVNNRIDMVPALLS 521
Query: 588 EEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVES 647
+ SL G +R AFS W+++ +++ +++I+S ++YE AQ IID K
Sbjct: 522 SNLCSLRGGEERFAFSCIWEMDQNANILSTRFHKSIIKSRKAMTYEEAQLIIDDK---TK 578
Query: 648 SNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYG 706
+ L E +++SL +++KI+K +R +GAL L + + D E
Sbjct: 579 QDALAE----------------ALRSLNKLAKIMKQRRLVNGALVLASPEVKIQMDSETM 622
Query: 707 TPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFC 766
P D + + N + EEFML AN + AE I FPD A+LRRHP P
Sbjct: 623 EPLDVEVKKLFETNSMIEEFMLQANISVAEKILEEFPDCAMLRRHPVPPATNFDPLVKAG 682
Query: 767 SKHGLQLDTSSSGQFHQSLEQAREKLKDDYV--LFDILINYATRPMQLASYFCSGDFKDD 824
G ++ S +SL++A K+ Y+ +F IL ATR M A YF SG ++ +
Sbjct: 683 RHLGFEIRVDSGKNLAKSLDEAVNT-KNPYLNTMFRIL---ATRCMLQAVYFVSGTYQKE 738
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKN-------- 876
++ HY LA P+YTHFTSP+RRY D++VHR L A+ Y +L KN
Sbjct: 739 -EYFHYGLAVPLYTHFTSPIRRYADIIVHRLLAVICGADSTYPD---LLDKNKTTELCQN 794
Query: 877 -NHREGV---RGR---------FLTGIFYDKDAAESLEGREALSVAALKYGVPCA 918
N+R + GR F G D++ + AL V +YG+ C
Sbjct: 795 LNYRNRMAQYAGRASIAFNTHLFFKGKLQDEEGYVLYVRKNALQVLIPRYGLECT 849
Score = 40.0 bits (92), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 40/82 (48%)
Query: 151 HQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIA 210
H ++ +F H S + + +G + +R + N LE + ++ + V++ G A
Sbjct: 199 HGNDFTKDVFPNHLSNVELLTGIREGKLLQGTFRASRDNFLEGFVNVDSYEEPVIVQGRA 258
Query: 211 AQNRAVEGDFVLIKVDRLSLWA 232
NR+V+GD V +++ + W
Sbjct: 259 GLNRSVDGDTVAVELLKEEEWV 280
>gi|348501558|ref|XP_003438336.1| PREDICTED: exosome complex exonuclease RRP44-like [Oreochromis
niloticus]
Length = 951
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 186/523 (35%), Positives = 271/523 (51%), Gaps = 63/523 (12%)
Query: 347 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 406
++PTG+VV +I+R+ R G LNV+Q K +R TP
Sbjct: 337 RKPTGKVVGVIKRNWR--PFCGMLNVSQ---IKESTRH-----------------LFTPA 374
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ P++ R+E A T+ + + ID W ++S +P H + G
Sbjct: 375 DRRIPRI-------------RIETRQASTLAGQRIMVAIDGWPKDSRYPNGHFVRSLGGA 421
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
GE E + +L E+ + FS LS LP +PW + E+++ R+DLR + ++DP
Sbjct: 422 GEKETEEEVLLLEHDVPHQAFSQAVLSFLPKMPWAITPEDMMKREDLRPLTVCSVDPPGC 481
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
TD+DDAL L +G VGVHIADVS+F+ PG ALD EA R T+VY+ ++I M+P L
Sbjct: 482 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDKEAANRGTTVYLCGKRIDMVPEL 541
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID D
Sbjct: 542 LSSNLCSLRSNVDRLAFSCIWEINHKAEILKTRFTKSVINSKASLTYAEAQMRID---DT 598
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
++ D+ +S++ L +++KILK +R GAL L + + F D E
Sbjct: 599 NKND----------------DITKSLRGLNKLAKILKRQRIEKGALTLSSLEVRFHMDSE 642
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + N + EEFMLLAN + A+ I FP+ ALLR+HPAP
Sbjct: 643 THDPIDLQTKELMETNSMVEEFMLLANISVAQKIYDEFPECALLRKHPAPPPSNYDILIK 702
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKD 823
+++ T S+ SL+ A+ D + F+ L+ ATR M A YFCSG
Sbjct: 703 AAKSKEVEVHTDSAKALADSLDAAK---VDGFPYFNTLLRILATRCMMQAVYFCSG---M 756
Query: 824 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
D+D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 757 DSDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADTTY 799
Score = 41.2 bits (95), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGV---QTDVLITGIAAQNRA 215
+F H+ + + ++ G + +R + N LEA ++G T+VLI G+ NRA
Sbjct: 225 LFPEHFPLSRIQTGIKSGSFLQGTFRASRDNYLEATVFVQGEGEDSTEVLIQGLQNLNRA 284
Query: 216 VEGDFVLIKVDRLSLWA 232
V D V +++ S W
Sbjct: 285 VHQDVVAVQLLPRSEWV 301
>gi|295293138|ref|NP_001001295.2| DIS3-like exonuclease 1 isoform 1 [Mus musculus]
gi|166201904|sp|Q8C0S1.2|DI3L1_MOUSE RecName: Full=DIS3-like exonuclease 1
Length = 1053
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 181/522 (34%), Positives = 282/522 (54%), Gaps = 38/522 (7%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 330 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 372
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK I+ ++ +A + +V RID W S +P H + V GR G++
Sbjct: 373 RIPK-----------IRISTQQAEALQDFRVVV-RIDSWEATSVYPNGHFVRVLGRIGDL 420
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLRN-FCIFTIDPS 523
E +I IL EN+I FS + +P PW+V +E RKDLR +F+IDP
Sbjct: 421 EGEIATILVENSISVVPFSEAQMCEMPVNTPENPWKVSPKEEQERKDLRTTHLVFSIDPK 480
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
D+DD LS+ L++G +GVHIADV++FV P + +D+EA+ R+T+ Y+ R+ MLP
Sbjct: 481 GCEDVDDTLSVRTLNNGNLELGVHIADVTHFVAPNSYIDVEARTRATTYYLADRRYDMLP 540
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLN-SAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
+LS ++ SL GVDR A S+ W+L+ ++ ++ W GRT+IRS KL YE AQ+++DG
Sbjct: 541 SILSADLCSLLGGVDRYAVSVMWELDKTSYEIKKVWYGRTIIRSAYKLFYEAAQELLDGN 600
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
F + + + Q + ++V +I L ++++ ++ KR GAL LE +
Sbjct: 601 FSIVDDIPELKALDKQSQQAKLEELVWAIGKLTDIARHIRAKRDRCGALELEGVEVRVQL 660
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
D+ D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 661 DDKKNIRDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 720
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
G +DT S+ SL+ A + D ++ +L + AT+ M A YF +G
Sbjct: 721 RECAKAKGFFIDTRSNKTLADSLDSAND--PKDPLVNKLLRSMATQAMSNALYFSTGSCA 778
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ +K
Sbjct: 779 EE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDK 819
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 25/126 (19%)
Query: 114 LLLATDLCGSIISRSCPEPIANDSSCWAYTNKDDNPSHQSEARCKIFAPHWSMEAVNEAL 173
L A DLC SI+ ++ + + E K + H +E + +
Sbjct: 196 LKAAHDLCDSILQ-----------------SRRERETESQETHGKEYPEHLPLEVLEAGI 238
Query: 174 EKGDAFKALYRVNAHN-RLEAYCKIEGVQT-------DVLITGIAAQNRAVEGDFVLIKV 225
+ G + + VN H ++EA+ ++ G + D+LI G A+NR++ GD V++++
Sbjct: 239 KSGRYIQGILNVNKHRAQIEAFVRLHGASSKDSGLVSDILIHGSKARNRSIHGDVVVVEM 298
Query: 226 DRLSLW 231
S W
Sbjct: 299 LPKSEW 304
>gi|197100203|ref|NP_001126723.1| DIS3-like exonuclease 1 [Pongo abelii]
gi|75041135|sp|Q5R5N8.1|DI3L1_PONAB RecName: Full=DIS3-like exonuclease 1
gi|55732455|emb|CAH92928.1| hypothetical protein [Pongo abelii]
Length = 1054
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 184/522 (35%), Positives = 279/522 (53%), Gaps = 38/522 (7%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 330 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 372
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK+ + + T++ V RID W S +P H + V GR G++
Sbjct: 373 RIPKIRISTQQA------------ETLQDFRVVVRIDSWESTSVYPNGHFVRVLGRIGDL 420
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLR-NFCIFTIDPS 523
E +I IL EN+I FS + +P PW+V EE RKDLR + +F+IDP
Sbjct: 421 EGEIATILVENSISVIPFSEAQMCEMPVNTPENPWKVSPEEEQKRKDLRKSHLVFSIDPK 480
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
D+DD LS+ L++G +GVHIADV++FV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 481 GCEDVDDTLSVRTLNNGNLELGVHIADVTHFVAPNSYIDIEARTRATTYYLADRRYDMLP 540
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
+LS ++ SL GVDR A SI W+L+ A ++ W GRT+IRS KL YE AQ+++DG
Sbjct: 541 SVLSADLCSLLGGVDRYAVSIMWELDKASYEIKKVWYGRTIIRSAYKLFYEAAQELLDGN 600
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
V + + Q + ++V +I L ++++ ++ KR GAL LE +
Sbjct: 601 LSVVDDIPEFKDLDEKSRQAKLEELVWAIGKLTDIARHVRAKRDGCGALELEGVEVRVQL 660
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
D+ +D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 661 DDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 720
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
G +DT S+ SL+ A D ++ +L + AT+ M A YF +G
Sbjct: 721 RECAKAKGFFIDTRSNKTLADSLDNANG--PHDPIVNRLLRSMATQAMSNALYFSTGSCA 778
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ +K
Sbjct: 779 EE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDK 819
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 45/80 (56%), Gaps = 8/80 (10%)
Query: 154 EARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHN-RLEAYCKIEGVQT-------DVL 205
E+ K + H +E + ++ G + + VN H ++EA+ +++G + D+L
Sbjct: 219 ESHGKEYPEHLPLEVLEAGIKSGRYIQGILNVNKHRAQIEAFVRLQGASSKDSDLVSDIL 278
Query: 206 ITGIAAQNRAVEGDFVLIKV 225
I G+ A+NR++ GD V++++
Sbjct: 279 IHGMKARNRSIHGDVVVVEL 298
>gi|91088453|ref|XP_969131.1| PREDICTED: similar to exosome complex exonuclease RRP44 [Tribolium
castaneum]
Length = 844
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 173/478 (36%), Positives = 264/478 (55%), Gaps = 23/478 (4%)
Query: 397 DREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQA 456
++EY TP + PK+ + P + + + + L +I +W ++ +
Sbjct: 234 NKEYALFTPRDKRIPKIKIPRISWPSGFQSKPQ----LYQDILFIVKITDW-KDVKYAIG 288
Query: 457 HVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFC 516
+ G G+++ + AIL E + + F + LP ++ +L +R+DLR C
Sbjct: 289 TITENLGLSGDLKIESLAILREFCLDPTPFGDDIRPFLP-KSTKISTSDLKNREDLRKEC 347
Query: 517 IFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQ 576
+FTIDP TA DLDDALS + L +G VGVHI+D S+F+ T LD + ++T++YM+
Sbjct: 348 VFTIDPITARDLDDALSCKELPNGNYEVGVHISDASFFLPENTRLDEIVKSKATTIYMVD 407
Query: 577 RKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQ 636
MLPV L SL PG D+LAFS+FW+L GD+VD I R+VI SC +L+YEHAQ
Sbjct: 408 SVYHMLPVELCFHC-SLLPGEDKLAFSVFWELTPTGDIVDFRIKRSVINSCVQLAYEHAQ 466
Query: 637 DIIDG---KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRL 693
+ID KF+ + P++Y F D+ + + L ++ L++KR +G+L++
Sbjct: 467 VMIDDPDRKFERDE-------LPEIYNGFNAHDLSKRVNDLQRIAVCLREKRRQNGSLKI 519
Query: 694 ENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHP 752
K F+ D G P + + + + L EEFMLLAN T A+ I A+PD A LR H
Sbjct: 520 NQIKIGFVLDPATGEPKEFYICENKPAHRLIEEFMLLANMTVAKWINEAYPDLAFLRLHE 579
Query: 753 APNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDY--VLFDILINYATRPM 810
AP + E + GL +D S+SG SL + +DD+ +L + +PM
Sbjct: 580 APKPTMMTELQKSLETLGLHIDISTSGGIQASLNKYIS--EDDFGKARMIVLNHLLAKPM 637
Query: 811 QLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE-AEKLYW 867
+ A YFC+G +++ D+ HYAL+ P+YTHFTSP+RRY D++VHR L A+L EK W
Sbjct: 638 KRARYFCAGALEEELDYSHYALSIPIYTHFTSPIRRYADIMVHRLLAASLNYREKPTW 695
Score = 44.3 bits (103), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 158 KIFAPHWSMEA-VNEALEKGDAFKALYRVNAHNRLEAYCKIEGV-QTDVLITGIAAQNRA 215
++F P + EA V LE + K R+N N E+Y E V +TD +IT + +NRA
Sbjct: 130 RVFFPEYLSEAEVESGLETRELMKGYIRINPKNAKESYVGNEDVSKTDYMITSVLDRNRA 189
Query: 216 VEGDFVLIKV 225
+GD V++++
Sbjct: 190 FDGDEVVLRL 199
>gi|453089671|gb|EMF17711.1| ribonuclease R [Mycosphaerella populorum SO2202]
Length = 994
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 222/726 (30%), Positives = 330/726 (45%), Gaps = 130/726 (17%)
Query: 154 EARCKIFAPHW-SMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQ 212
+A+ ++ P + S+ A+ ++ G + + V+ +N LE + ++I G
Sbjct: 249 DAKTQLLYPDYVSVSAMLTGVKNGTMHQGTFSVSPYNYLEGTVHVPSFDRPLIIQGRENS 308
Query: 213 NRAVEGDFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYE 272
NRAV GD V+++V LP + ++
Sbjct: 309 NRAVSGDIVVLEV-----------------------LPKD-----------------QWK 328
Query: 273 YSNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMN 332
+ ++ E+ I+ +D++ +E DS E V S+Q+ +
Sbjct: 329 APSSKVIVEEDINKNDNAENE----------------------DDSGEGVVSAQERKALR 366
Query: 333 AIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSS 392
+ + + +PT +VV II+R+ W Y G KD+ K +
Sbjct: 367 DEVKRAHGKAGEGKPQPTAKVVGIIKRN--------------WRQYVGHIDKDSVKTGAK 412
Query: 393 LSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESP 452
S ++ + L P + PK+ V + D + KR V ID W+ ES
Sbjct: 413 QSRA-QQTVFLIPMDKRIPKIRVRTRQAGDLLGKR------------VLVTIDSWDRESR 459
Query: 453 FPQAHVLHVFG----RGGEVEPQINAILYENAICCSGFSPESLSCLPC------VPWEVP 502
+P H + G +G E E A+L E + F L CLP VP +V
Sbjct: 460 YPVGHFVRSLGELETKGAETE----ALLLEWDVQYRPFPKTVLDCLPAEGHDWKVPADVN 515
Query: 503 QEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALD 562
R+DLR I +IDP D+DDAL ++L +G VGVHIADVS+FV P A+D
Sbjct: 516 DPGWRGRRDLRGELICSIDPPGCVDIDDALHAKKLPNGNFEVGVHIADVSHFVKPNNAMD 575
Query: 563 IEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRT 622
EA +R T+VY++ ++I MLP+LL ++ SL P V+R AFS+ W+L+ D+V ++
Sbjct: 576 KEASLRGTTVYLVDKRIDMLPMLLGTDLCSLKPYVERYAFSVLWELDQNADIVSATFTKS 635
Query: 623 VIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILK 682
VI S SYE AQ ID Q + D+ + ++ L +SK L+
Sbjct: 636 VIASREAFSYERAQLRID-------------------DQSQQDDLTQGMRHLMYLSKKLR 676
Query: 683 DKRFTDGALRLENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARA 741
KR GAL L + + V E P D D N L EEFMLLAN + A A
Sbjct: 677 AKRMAAGALNLASPEVRVETESETSDPVDVKTKQLLDTNQLVEEFMLLANISVAGKNYEA 736
Query: 742 FPDSALLRRHPAPNMRKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFD 800
FP +ALLRRHPAP E +K G++L SS SL++ + + F+
Sbjct: 737 FPQTALLRRHPAPPKANFEELGNQLKTKKGMELRHDSSKALADSLDECVDPQEP---FFN 793
Query: 801 ILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAA 859
L+ ATR M A YFCSG + ++ HY LA +YTHFTSP+RRY DL HR L AA
Sbjct: 794 TLVRILATRCMMSAEYFCSGT-QAYPEFRHYGLASEIYTHFTSPIRRYADLEAHRQLAAA 852
Query: 860 LEAEKL 865
+E E +
Sbjct: 853 IEYEPI 858
>gi|195490030|ref|XP_002092972.1| GE21064 [Drosophila yakuba]
gi|194179073|gb|EDW92684.1| GE21064 [Drosophila yakuba]
Length = 1083
Score = 280 bits (716), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 158/410 (38%), Positives = 229/410 (55%), Gaps = 9/410 (2%)
Query: 456 AHVLHVFGRGGEVEPQINAILYENAIC-CSGFSPESLSCLPCVPWEVPQEELLSRKDLRN 514
A ++ GR G ++ ++ AIL+ N + F P + +++L RKDLR
Sbjct: 506 AELIQPVGRVGNLDDELKAILFHNGLRDIKPFEQRFNDMYSQPPPPISKDDLRQRKDLRK 565
Query: 515 FCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYM 574
CIFTIDP TA DLDDA+SIE+L + VGVHI+DVS+++L LD + RSTS+Y+
Sbjct: 566 VCIFTIDPMTARDLDDAVSIEKLGENEYEVGVHISDVSHYLLEDNELDNIVKERSTSIYL 625
Query: 575 LQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW--IGRTVIRSCCKLSY 632
I MLP L SL PG D+ AFS+FW +N G ++ + RTVI SC + +Y
Sbjct: 626 ANEVIHMLPQTLCMRC-SLLPGEDKFAFSVFWRMNGEGTMLQKKPEFCRTVINSCSQFAY 684
Query: 633 EHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALR 692
EHAQ IID + + N +P + F D+ + L++++ ++ RF +G+L
Sbjct: 685 EHAQKIIDNPNERFTEN----DFPTILNGFNSDDIKNRVLWLHDIASSIRKTRFDNGSLT 740
Query: 693 LENSKPVFLFDEY-GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH 751
+ N+K F+ D G P + + + N L EEFMLLAN+ A I +FPD A+LR H
Sbjct: 741 INNAKLRFVLDPVSGEPLSFEVEKQREANRLIEEFMLLANQAVARFIHDSFPDIAVLRNH 800
Query: 752 PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQ 811
P P + L+ G +LD SSS +S+ + + + + L +PM
Sbjct: 801 PPPLTKSLKSLREKLLVLGFELDYSSSKALQESMVRLCNEAPNPVAMNACLSQLLMKPMA 860
Query: 812 LASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 861
A+YFCS + D HYAL+ P+YTHFTSP+RRYPD++VHR L AAL+
Sbjct: 861 RATYFCSEGKAEPADLWHYALSIPIYTHFTSPIRRYPDILVHRLLAAALK 910
>gi|14250916|emb|CAC39263.1| putative ribonuclease II-like protein [Trypanosoma brucei]
Length = 895
Score = 280 bits (716), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 210/653 (32%), Positives = 323/653 (49%), Gaps = 58/653 (8%)
Query: 313 PSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPT------KRPTGRVVSIIERSPRRDGI 366
P T + + N+ N L+ M+S+ PT K+P+G V++++ER
Sbjct: 117 PDGRRITRWIRDTTMNNRKNREMWLAEMMSA-PTEHNWHGKKPSGSVIAVLER------- 168
Query: 367 VGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKK 426
+ DA ++ + DR + + P + V +D+P S+++
Sbjct: 169 ------KHPLLFVARLADDALSSQEVIQ--DRRFYRFKVFDQLLPHIAVFGRDIPFSLRE 220
Query: 427 RLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGF 486
+ E + +E W ES FP A ++ FG + AI + I F
Sbjct: 221 SIRERFYLLRLETTTGGDIVW-AESRFPTARIISTFGSVHSLRANTFAICSAHHIVTDDF 279
Query: 487 SPESLSCLPCVPWEVPQEEL--LSRKDLRNF-CIFTIDPSTATDLDDALSIERLSDGISR 543
S E+ +C+P EE+ R+DLR + +IDP+TA DLDDALSI L G R
Sbjct: 280 SEEACNCIPDRLIIPNSEEMKRTGRRDLRREEFVCSIDPATARDLDDALSITLLPGGY-R 338
Query: 544 VGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFS 603
VGVHIADVS+FV PG+ALD E + R+TSVY++ R MLP LSEE SL+PG D+LAFS
Sbjct: 339 VGVHIADVSHFVSPGSALDEEGRARATSVYLVDRVYHMLPRKLSEEYCSLHPGSDKLAFS 398
Query: 604 IFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFE 663
+ L+ G + W G++VIR+ C+LSY+ AQ IIDG + G +
Sbjct: 399 AIFQLDLNGKLKGEWFGKSVIRNRCRLSYDDAQRIIDGNLTTLDALDYGGVTDRRELSQL 458
Query: 664 WSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSV---LSGREDLN 720
+ V S+K L++++ L+ F G L + F F++ P + + + + N
Sbjct: 459 KARVATSVKHLFDLASKLRAASFERGRLAFSTPEIGFHFEDISNPTHPIGFNVHRQIEAN 518
Query: 721 FLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQ 780
+L EEFMLLAN A+ I + PD A+LR HP P + + ++ ++L G+
Sbjct: 519 WLVEEFMLLANLRVAQKIVQYLPDQAILRVHPPPKRVPFEQLKVSLARVNIEL----KGR 574
Query: 781 FHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGD-FKDDTDWGHYALAFPVYTH 839
++SLEQ ++ D+ L D + + LA Y +G+ F + GHYAL YTH
Sbjct: 575 SNKSLEQLLNSVR-DHPLRDEISIMVKNTLSLAKYCTNGENFTNKVPLGHYALGLEWYTH 633
Query: 840 FTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAES 899
FTSP+RRY D++VHR L ALE E + V+G+ TG K A +
Sbjct: 634 FTSPIRRYADIIVHRQLLCALEIESI----------------VKGKHRTG----KTCAGA 673
Query: 900 LEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLK 952
+ G E + + ++ +++ N+A CN+ K A +V +A +KL+ LK
Sbjct: 674 V-GMEVECLDSAEFFTSTYEVM-NIADECNENKRAADSVSEASLKLFFCHYLK 724
>gi|395502696|ref|XP_003755713.1| PREDICTED: DIS3-like exonuclease 1 [Sarcophilus harrisii]
Length = 1055
Score = 280 bits (716), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 184/518 (35%), Positives = 280/518 (54%), Gaps = 38/518 (7%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 330 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 372
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK I+ ++ +A + +V RID W S +P H + V GR ++
Sbjct: 373 RIPK-----------IRISTQQAEALQDFRVVV-RIDSWESTSVYPNGHFVRVLGRIRDL 420
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLR-NFCIFTIDPS 523
E +I+ IL EN+I + FS + +P PW+V EE R DLR +F+IDP
Sbjct: 421 EGEISTILVENSISVAPFSEAQMCEMPVNTPENPWKVNPEEERERIDLRKTHLVFSIDPK 480
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
D+DDALS+ LS+G +GVHIADV++FV+ + DIEA+ R+T+ Y+ R+ MLP
Sbjct: 481 GCEDVDDALSVRTLSNGNLELGVHIADVTHFVMTNSYTDIEARTRATTYYLADRRYDMLP 540
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
+LS ++ SL GVDR A S+ W+L+ ++ W GRT+I+S KL YE AQD++DG
Sbjct: 541 SILSADLCSLLGGVDRYAVSVLWELDKKSFEIKKVWYGRTIIQSAYKLYYEAAQDLLDGN 600
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
F V + + Q + ++V +I L ++++ ++ KR + GAL LE +
Sbjct: 601 FSVIGDIPEFKEMDEKSRQAKQDELVWAIGKLTDIARHVRAKRDSCGALELEGVEVRVQL 660
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
D+ +D + +++ E M+LAN A+ I FP ALLR+HP P+ E
Sbjct: 661 DDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWENFPHQALLRQHPPPHQEFFSEL 720
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
G +DT S+ SL++A + D ++ IL + AT+ M A YF +G
Sbjct: 721 RECAKAKGFSMDTRSNKTLADSLDRAND--PRDPLVNRILRSMATQAMSNALYFSTGSCA 778
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
+D ++ HY LA YTHFTSP+RRY D+VVHR L AA+
Sbjct: 779 ED-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAI 815
Score = 43.1 bits (100), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 158 KIFAPHWSMEAVNEALEKGDAFKALYRVNAHN-RLEAYCKIEGVQT-------DVLITGI 209
K + H +E + ++ G + + VN H ++EA+ +++G + D+L+ G+
Sbjct: 223 KEYPEHLPLEVLEAGIKSGRYIQGILNVNKHRAQIEAFVRLQGASSKDSDLISDILVHGM 282
Query: 210 AAQNRAVEGDFVLIKV 225
A+NR++ GD V++++
Sbjct: 283 KARNRSIHGDVVVVEL 298
>gi|50511205|dbj|BAD32588.1| mKIAA1955 protein [Mus musculus]
Length = 1073
Score = 280 bits (716), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 181/522 (34%), Positives = 282/522 (54%), Gaps = 38/522 (7%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 350 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 392
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK I+ ++ +A + +V RID W S +P H + V GR G++
Sbjct: 393 RIPK-----------IRISTQQAEALQDFRVVV-RIDSWEATSVYPNGHFVRVLGRIGDL 440
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLRN-FCIFTIDPS 523
E +I IL EN+I FS + +P PW+V +E RKDLR +F+IDP
Sbjct: 441 EGEIATILVENSISVVPFSEAQMCEMPVNTPENPWKVSPKEEQERKDLRTTHLVFSIDPK 500
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
D+DD LS+ L++G +GVHIADV++FV P + +D+EA+ R+T+ Y+ R+ MLP
Sbjct: 501 GCEDVDDTLSVRTLNNGNLELGVHIADVTHFVAPNSYIDVEARTRATTYYLADRRYDMLP 560
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLN-SAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
+LS ++ SL GVDR A S+ W+L+ ++ ++ W GRT+IRS KL YE AQ+++DG
Sbjct: 561 SILSADLCSLLGGVDRYAVSVMWELDKTSYEIKKVWYGRTIIRSAYKLFYEAAQELLDGN 620
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
F + + + Q + ++V +I L ++++ ++ KR GAL LE +
Sbjct: 621 FSIVDDIPELKALDKQSQQAKLEELVWAIGKLTDIARHIRAKRDRCGALELEGVEVRVQL 680
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
D+ D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 681 DDKKNIRDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 740
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
G +DT S+ SL+ A + D ++ +L + AT+ M A YF +G
Sbjct: 741 RECAKAKGFFIDTRSNKTLADSLDSAND--PKDPLVNKLLRSMATQAMSNALYFSTGSCA 798
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ +K
Sbjct: 799 EE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDK 839
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 25/126 (19%)
Query: 114 LLLATDLCGSIISRSCPEPIANDSSCWAYTNKDDNPSHQSEARCKIFAPHWSMEAVNEAL 173
L A DLC SI+ ++ + + E K + H +E + +
Sbjct: 216 LKAAHDLCDSILQ-----------------SRRERETESQETHGKEYPEHLPLEVLEAGI 258
Query: 174 EKGDAFKALYRVNAHN-RLEAYCKIEGVQT-------DVLITGIAAQNRAVEGDFVLIKV 225
+ G + + VN H ++EA+ ++ G + D+LI G A+NR++ GD V++++
Sbjct: 259 KSGRYIQGILNVNKHRAQIEAFVRLHGASSKDSGLVSDILIHGSKARNRSIHGDVVVVEM 318
Query: 226 DRLSLW 231
S W
Sbjct: 319 LPKSEW 324
>gi|145354208|ref|XP_001421383.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581620|gb|ABO99676.1| predicted protein, partial [Ostreococcus lucimarinus CCE9901]
Length = 668
Score = 280 bits (715), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 193/532 (36%), Positives = 268/532 (50%), Gaps = 46/532 (8%)
Query: 342 SSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYI 401
++ +K TGRVV I R+ +V L+V + K +R + R
Sbjct: 88 TTTTSKVRTGRVVGITHRATL--DVVACLDVVDEEDLKSDARGE------------RNGA 133
Query: 402 QLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHV 461
P K K+ +L + D + +R RID W +P H++ +
Sbjct: 134 LCVPMDSKIVKVKLLTRRARDLVGQRF------------IVRIDRWLANQRYPSGHLVKI 181
Query: 462 FGRGGEVEPQINAILYENAICCSGFSPESLSCLP--CVPWEVPQEELLSRKDLRNFCIFT 519
G GEV+ ++ A+L I F +L+ LP W VP+EE+ R+DLR+ +
Sbjct: 182 LGGVGEVDGEMAALLARYDIPAEPFGARALAELPREGADWMVPKEEIEKRRDLRHHRACS 241
Query: 520 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 579
IDP TD+DDALS+ +D + +GVHIADVSYFV PGT LD EAQ+R T+VY++ R++
Sbjct: 242 IDPPGCTDVDDALSVHVSADRVE-IGVHIADVSYFVRPGTLLDHEAQMRGTTVYLVDRRL 300
Query: 580 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDII 639
MLP LLSE + SL DRLA S W L+ DVVD W+GRTVI S +++Y AQ I
Sbjct: 301 DMLPSLLSENLASLLERRDRLAVSCVWTLDRNLDVVDVWLGRTVIHSRHQMTYYQAQAIH 360
Query: 640 DGK--FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 697
DG+ +SS+T + E V +++L + R GA+ LE+++
Sbjct: 361 DGQPLPHGDSSDT--------FDAVERELVRGDLQTLVAFANKTNAIRLAHGAVELESAE 412
Query: 698 PVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNM 756
F D + TP + + + + E M+LAN AA RAFP ALLRRH P
Sbjct: 413 LRFETDAQTKTPTEVLQKDEVPMMRVVAELMILANSAAARTTHRAFPSRALLRRHAPPRE 472
Query: 757 RKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYF 816
E + G++LD SS + SL AR + + + ATR M A Y
Sbjct: 473 GGFEELTKLAAAKGIELDGSSGEALNASL--ARVAATSEPEVTTLFRGLATRAMSEAQYI 530
Query: 817 CSGDFKD-DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL---EAEK 864
SG D +GHY LA YTHFTSP+RRY D+VVHR L AA+ EAEK
Sbjct: 531 SSGSISGADGGFGHYGLALTYYTHFTSPIRRYADVVVHRQLIAAVDVAEAEK 582
>gi|410960990|ref|XP_003987069.1| PREDICTED: DIS3-like exonuclease 1 [Felis catus]
Length = 996
Score = 280 bits (715), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 181/522 (34%), Positives = 278/522 (53%), Gaps = 38/522 (7%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 272 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 314
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK+ + + T++ V RID W S +P H + V GR G++
Sbjct: 315 RIPKIRISTQQA------------ETLQDFRVVVRIDSWESTSVYPNGHFVRVLGRIGDL 362
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLR-NFCIFTIDPS 523
E +I IL EN+I FS + +P PW+V EE R+DLR +F+IDP
Sbjct: 363 EGEIATILVENSISVVPFSEAQMCEMPVNTPGNPWKVSPEEERERQDLRKTHLVFSIDPK 422
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
D+DD LS+ L +G +GVHIADV++FV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 423 GCEDVDDTLSVRSLDNGHLELGVHIADVTHFVAPNSYIDIEARTRATTYYLADRRYDMLP 482
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLN-SAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
LS ++ SL GVDR A S+ W+L+ ++ ++ W GRT+IRS KL YE AQ+++DG
Sbjct: 483 SALSADLCSLLGGVDRYAVSVIWELDKTSYEIKKVWYGRTIIRSAYKLFYEAAQELLDGN 542
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
F++ + Q ++ +I L ++++ ++ KR GAL LE +
Sbjct: 543 FNIVDDIPEFRDLDEKTRQARLEELAWAIGKLTDIARHVRAKRDGCGALELEGVEVRVQL 602
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
DE +D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 603 DEKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 662
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
G +DT S+ SL+ A + +D ++ +L + AT+ M A YF +G
Sbjct: 663 RECAKAKGFFIDTRSNKTLADSLDNAND--PNDPIVNRLLRSMATQAMSNALYFSTGSCA 720
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ +K
Sbjct: 721 EE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAIAKDK 761
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 46/80 (57%), Gaps = 8/80 (10%)
Query: 154 EARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHN-RLEAY-------CKIEGVQTDVL 205
E+ K +A H +E + ++ G + + VN H ++EA+ CK G+ +D+L
Sbjct: 161 ESHGKEYAEHLPLEVLEAGIKSGRYIQGILNVNKHRAQIEAFVRLQGASCKDSGLASDIL 220
Query: 206 ITGIAAQNRAVEGDFVLIKV 225
I G+ A+NR++ GD V++++
Sbjct: 221 IHGMKARNRSIHGDVVVVEL 240
>gi|449438436|ref|XP_004136994.1| PREDICTED: exosome complex exonuclease RRP44-like [Cucumis sativus]
Length = 934
Score = 279 bits (714), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 183/521 (35%), Positives = 268/521 (51%), Gaps = 56/521 (10%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 407
RP GRV+ II+R+ W +Y GS S + Y
Sbjct: 337 RPAGRVIGIIKRN--------------WHSY-CGSLDPMPMPAGSGGI---AYALFVSKD 378
Query: 408 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 467
+ PK+ + + L + + KR+ +VA +D W+ S +P H + G G+
Sbjct: 379 RRIPKIRIQTRQLENLLDKRI----------IVA--VDSWDRLSRYPSGHYVRSIGEIGD 426
Query: 468 VEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLS--RKDLRNFCIFTIDPSTA 525
+ + +L EN I FS + ++CLP +PW V ++ + R+DLR+ +F++DP
Sbjct: 427 RDTESEVVLIENDINSRPFSSQVMTCLPPLPWSVSPVDIANPIRQDLRHLNVFSVDPPGC 486
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
D+DDAL LS+G VGVHIADV+ FV PGTALD EA R TSVY+++R+I MLP
Sbjct: 487 KDIDDALHCTALSNGNFEVGVHIADVTNFVHPGTALDDEAAQRGTSVYLVERRIDMLPKP 546
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
L+E++ SL V+RLAFS+ W++ D+V +++I+S LSY AQ +D +
Sbjct: 547 LTEDICSLRADVERLAFSVIWEMTPEADIVSTSYTKSIIKSSAALSYVEAQARMDDSRLM 606
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
+ + R ++++ ++K ++ +R GAL L +++ F D E
Sbjct: 607 DP-------------------ITRDLRNMNALAKKMRLRRIERGALTLASAEVKFQIDTE 647
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + + N + EEFML AN + AE I + FP +LLRRHP P L
Sbjct: 648 THDPLDIGMYQIREANQMVEEFMLAANVSVAEKILKHFPLCSLLRRHPTPTKEMLEPLIR 707
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 824
GL LD SSS SL++A L DD ++ ATR M A YF SGD
Sbjct: 708 TAVAVGLDLDVSSSKALADSLDRA---LGDDPYFNKLIRILATRCMTQAVYFYSGDLS-P 763
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 865
++ HY LA +YTHFTSP+RRY D++VHR L A+L KL
Sbjct: 764 PEYQHYGLAARLYTHFTSPIRRYADVIVHRLLAASLGIFKL 804
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%)
Query: 144 NKDDNPSHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTD 203
NK+D + R +++ H M + L +G + RVN +N EAY E + +
Sbjct: 202 NKEDVEDLRPSKRKVLYSEHKPMSEITSGLHRGIYHQGKLRVNRYNPFEAYVGSESIGDE 261
Query: 204 VLITGIAAQNRAVEGDFVLIKVDRLSLWAKMKGFS 238
++I G NRA +GD V +++ W + K +
Sbjct: 262 IIIYGRTNMNRAFDGDVVAVELLSRDQWHEEKSLT 296
>gi|425766170|gb|EKV04795.1| Exosome complex exonuclease exoribonuclease (Rrp44), putative
[Penicillium digitatum Pd1]
gi|425774524|gb|EKV12827.1| Exosome complex exonuclease exoribonuclease (Rrp44), putative
[Penicillium digitatum PHI26]
Length = 1071
Score = 279 bits (714), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 224/738 (30%), Positives = 337/738 (45%), Gaps = 140/738 (18%)
Query: 144 NKDDNPSHQSEARCKIFAP-HWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQT 202
+KD S ++ R ++F P ++SM + L G + ++ V+ +N LEA K
Sbjct: 281 SKDARESRET-TRGELFYPEYFSMSKLTTGLRAGTLHQGVFNVSPYNYLEASVKTAAFDK 339
Query: 203 DVLITGIAAQNRAVEGDFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICK 262
+LI G NRA+ + +S +VE LP +
Sbjct: 340 PLLILGRDNGNRAI---------------------AGDSVVVE--VLPQD---------- 366
Query: 263 GKSKVDVSYEYSNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKV 322
++ + ++ E+ + +D+ +E TE V
Sbjct: 367 -------QWKSPSTKIVDEEAVTRNDNPDTE------------------------ETEAV 395
Query: 323 SSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGS 382
+ ++ + R + +S +PT +VV +I+RS W Y G
Sbjct: 396 VTDRERKALQEEVRKAHGKNSDGKPQPTAKVVGVIKRS--------------WRQYVG-- 439
Query: 383 RKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAA 442
DA S S ++ + L P + PK+ V + + + +R+ LV
Sbjct: 440 HVDASSTGSQASGRRQQNVFLLPMDKRIPKIRVRTRQASEILGQRI----------LVT- 488
Query: 443 RIDEWNEESPFPQAHVLHVFG----RGGEVEPQINAILYENAICCSGFSPESLSCLPCV- 497
ID W+ +S +P H + G +G E E A+L E + F L CLP
Sbjct: 489 -IDSWDRDSRYPTGHFVRSLGELETKGAETE----ALLLEYDVQYKPFPKSVLDCLPSEG 543
Query: 498 -PWEVPQEE----LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVS 552
W+VP + RKDLR+ I +IDP D+DDAL L +G VGVHIADVS
Sbjct: 544 HDWKVPASKEDKGWNGRKDLRDLLICSIDPPGCQDIDDALHARLLPNGNYEVGVHIADVS 603
Query: 553 YFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAG 612
+FV P +DIEA VR T+VY++ ++I MLP LL ++ SL P V+R AFS+ W++
Sbjct: 604 HFVKPNNPMDIEASVRGTTVYLVDKRIDMLPHLLGTDLCSLKPYVERYAFSVLWEITPDA 663
Query: 613 DVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIK 672
++V ++VIRS SYE AQ ID K + ++ S++
Sbjct: 664 EIVSSNFTKSVIRSREAFSYEQAQLRIDDK-------------------SQQDELTESMR 704
Query: 673 SLYEVSKILKDKRFTDGALRLENSKPVFLF----DEYGTPYDSVLS-GREDLNFLFEEFM 727
+L + SKIL+ KR GAL L + P DE G P V + D N L EEFM
Sbjct: 705 TLLKFSKILRQKRMDAGALNL--ASPEVRIESEGDEVGDPLTDVKTKAMLDTNSLVEEFM 762
Query: 728 LLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFE-AFCSKHGLQLDTSSSGQFHQSLE 786
LLAN T + +F +ALLRRH P + + + K ++LD SSS SL+
Sbjct: 763 LLANITVGSKVYESFSQTALLRRHATPPPQNFEDLQNQLSKKRNMELDVSSSRALADSLD 822
Query: 787 QAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLR 845
+ + + F+ L+ ATR M A YFC+G F ++++ HY LA P+YTHFTSP+R
Sbjct: 823 RC---VDPNNPFFNTLVRILATRCMTSAEYFCAGAFA-ESEFRHYGLASPIYTHFTSPIR 878
Query: 846 RYPDLVVHRTLNAALEAE 863
RY DL+VHR L +A+ E
Sbjct: 879 RYADLMVHRQLASAIGYE 896
>gi|409099069|ref|ZP_11219093.1| ribonuclease R [Pedobacter agri PB92]
Length = 710
Score = 279 bits (714), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 162/429 (37%), Positives = 229/429 (53%), Gaps = 34/429 (7%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 499
V + +W E + P V HV G GE ++NAIL + F P+ +P
Sbjct: 187 VLVTLSDWPESAKNPIGIVKHVLGNQGENNTEMNAILAQYGFPLE-FPPQVEKEANAIPE 245
Query: 500 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 559
E+P +E+ RKD RN FTIDP+ A D DDA+S ++L +G +GVHIADVS++V+ GT
Sbjct: 246 EIPADEIAKRKDFRNVLTFTIDPADAKDFDDAISYQKLPNGNHEIGVHIADVSHYVIQGT 305
Query: 560 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 619
LD EA R+TSVY++ R IPMLP LS V SL P D+L F+ ++L+ ++ W
Sbjct: 306 DLDKEAYSRATSVYLVDRVIPMLPERLSNGVCSLRPNEDKLCFAAVFELDEQANIQSEWY 365
Query: 620 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 679
GRTVI S + SYE AQ++I+ K EG D I L E++
Sbjct: 366 GRTVIHSDRRFSYEEAQEVIENK----------EG-----------DYATEILKLNELAY 404
Query: 680 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 739
IL+D++F +GA+ E+++ F DE G P + R+D + L E++MLLAN+ AE +A
Sbjct: 405 ILRDRKFKNGAISFESTEVKFKLDESGKPIGVYVKERKDAHKLIEDYMLLANRKVAEFVA 464
Query: 740 RAFPDSALL----RRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDD 795
+ L R H +PNM L F F S+ G +++T S + +SL ++
Sbjct: 465 KKQKGEKKLTFVYRVHDSPNMETLNTFATFASRFGYKINTKSDKEIAKSLNHLMADVEGK 524
Query: 796 YVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRT 855
+IL + A R M A Y HY LAF YTHFTSP+RRYPD++ HR
Sbjct: 525 KEQ-NILTSLAIRSMAKAIYSTK-------KTSHYGLAFEYYTHFTSPIRRYPDVMAHRL 576
Query: 856 LNAALEAEK 864
L L+ K
Sbjct: 577 LQTYLDGGK 585
>gi|296213519|ref|XP_002753303.1| PREDICTED: DIS3-like exonuclease 1 [Callithrix jacchus]
Length = 1054
Score = 279 bits (713), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 184/521 (35%), Positives = 280/521 (53%), Gaps = 38/521 (7%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 330 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 372
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK I+ ++ +A + +V RID W S +P H + V GR ++
Sbjct: 373 RIPK-----------IRISTQQAEALQDFRVVV-RIDSWESTSVYPNGHFVRVLGRIRDL 420
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLR-NFCIFTIDPS 523
E +I IL EN+I FS + +P PW+V EE RKDLR + +F+IDP
Sbjct: 421 EGEIATILVENSISVVPFSEAQMCEMPVNTPENPWKVSPEEERERKDLRRSHLVFSIDPK 480
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
D+DD LS+ L +G +GVHIADV++FV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 481 GCEDVDDTLSVRTLHNGNLELGVHIADVTHFVAPNSYIDIEARTRATTYYLADRRYDMLP 540
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLN-SAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
+LS ++ SL GVDR A SI W+L+ ++ ++ W GRT+IRS KL YE AQ+++DG
Sbjct: 541 SILSADLCSLLGGVDRYAVSIMWELDKTSYEIKKVWYGRTIIRSAYKLFYEAAQELLDGN 600
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
+ + Q + ++V +I L ++++ ++ KR GAL LE +
Sbjct: 601 LSIIDDIPEFRDLDEKSRQAKLEELVWAIGKLTDIARHVRAKRDGCGALELEGVEVRVQL 660
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
DE +D + +++ E M+LAN A+ I +FP LLR+HP P+ E
Sbjct: 661 DEKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQVLLRQHPPPHQEFFSEL 720
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
G +DT S+ SL+ A + +D V+ +L + AT+ M A YF +G K
Sbjct: 721 RECAKAKGFFIDTRSNKTLADSLDNAND--PNDPVVNRLLRSMATQAMSNALYFSTGACK 778
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE 863
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ E
Sbjct: 779 EE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKE 818
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 45/80 (56%), Gaps = 8/80 (10%)
Query: 154 EARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHN-RLEAYCKIEGVQT-------DVL 205
E+ K + H +E + ++ G + + VN H ++EA+ +++G + D+L
Sbjct: 219 ESHGKEYPEHLPLEVLEAGIKSGRYIQGILNVNKHRAQMEAFVRLQGASSKDSDLVSDIL 278
Query: 206 ITGIAAQNRAVEGDFVLIKV 225
I G+ A+NR++ GD V++++
Sbjct: 279 IHGMKARNRSIHGDVVVVEL 298
>gi|222624135|gb|EEE58267.1| hypothetical protein OsJ_09271 [Oryza sativa Japonica Group]
Length = 919
Score = 279 bits (713), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 190/522 (36%), Positives = 271/522 (51%), Gaps = 73/522 (13%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 407
RP GRVV II+R+ W +Y GS + S V ++
Sbjct: 338 RPVGRVVGIIKRN--------------WNSY-CGSLEPMPMPAGSGGVAHALFVS---KD 379
Query: 408 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 467
+ PK+ + + L + + KR+ +VA +D W+ S +P H +
Sbjct: 380 RRIPKIRIQTRQLGNLLDKRI----------IVA--VDSWDVLSRYPSGHYV-------- 419
Query: 468 VEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLS--RKDLRNFCIFTIDPSTA 525
+L EN I FS + L+CLP +PW + E+L + R+DLR+ +F++DP
Sbjct: 420 -------VLIENDINTRPFSTQVLACLPPLPWTLSPEDLANPNRQDLRHVRVFSVDPPGC 472
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
D+DDAL L +G VGVHIADV+ FV PGT LD EA R TSVY++ ++I MLP
Sbjct: 473 RDIDDALHCTPLPNGNFEVGVHIADVTNFVHPGTPLDEEASQRGTSVYLVGQRIDMLPKP 532
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
L+E+V SL V+RLAFS+ W++ D++ ++VI+SC +SY AQ +D V
Sbjct: 533 LTEDVCSLRADVERLAFSVIWEMTPHADIISTRYTKSVIKSCAAMSYVEAQARMDDSRLV 592
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
+ + +++L ++KI++ +R GAL L +++ F D E
Sbjct: 593 DP-------------------LTVDLRNLNSLAKIMRHRRCERGALTLASAEVKFEIDSE 633
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + + N + EEFML AN + AE I + FP +LLRRHP+P L
Sbjct: 634 THDPLDIGIYQIREANQMIEEFMLAANISVAEKILKHFPLCSLLRRHPSPTKEMLEPLLR 693
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKD 823
S GL LD SSS +SL+ A K+D F+ LI ATR M A YFCSGD
Sbjct: 694 TASSVGLNLDVSSSKALAESLDNA----KNDDPYFNKLIRILATRCMTQAVYFCSGDLT- 748
Query: 824 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 865
+++ HY LA +YTHFTSP+RRY D++VHR L AALE KL
Sbjct: 749 FSEYYHYGLAASLYTHFTSPIRRYADVIVHRLLAAALEIAKL 790
Score = 46.6 bits (109), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
I++ H M + L G + RVN +N EAY E + +++I G + NRA +G
Sbjct: 217 IYSEHKPMSEITAGLRCGIYHQGKLRVNRYNPFEAYVGSESIGDEIVIHGRSNMNRAFDG 276
Query: 219 DFVLIKVDRLSLWAKMKGF 237
D V +++ W + K F
Sbjct: 277 DIVAVELLPQDQWHESKSF 295
>gi|218192016|gb|EEC74443.1| hypothetical protein OsI_09834 [Oryza sativa Indica Group]
Length = 919
Score = 278 bits (712), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 190/522 (36%), Positives = 271/522 (51%), Gaps = 73/522 (13%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 407
RP GRVV II+R+ W +Y GS + S V ++
Sbjct: 338 RPVGRVVGIIKRN--------------WNSY-CGSLEPMPMPAGSGGVAHALFVS---KD 379
Query: 408 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 467
+ PK+ + + L + + KR+ +VA +D W+ S +P H +
Sbjct: 380 RRIPKIRIQTRQLGNLLDKRI----------IVA--VDSWDVLSRYPSGHYV-------- 419
Query: 468 VEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLS--RKDLRNFCIFTIDPSTA 525
+L EN I FS + L+CLP +PW + E+L + R+DLR+ +F++DP
Sbjct: 420 -------VLIENDINTRPFSTQVLACLPPLPWTLSPEDLANPNRQDLRHVRVFSVDPPGC 472
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
D+DDAL L +G VGVHIADV+ FV PGT LD EA R TSVY++ ++I MLP
Sbjct: 473 RDIDDALHCTPLPNGNFEVGVHIADVTNFVHPGTPLDEEASQRGTSVYLVGQRIDMLPKP 532
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
L+E+V SL V+RLAFS+ W++ D++ ++VI+SC +SY AQ +D V
Sbjct: 533 LTEDVCSLRADVERLAFSVIWEMTPHADIISTRYTKSVIKSCAAMSYVEAQARMDDSRLV 592
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
+ + +++L ++KI++ +R GAL L +++ F D E
Sbjct: 593 DP-------------------LTVDLRNLNSLAKIMRHRRCERGALTLASAEVKFEIDSE 633
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + + N + EEFML AN + AE I + FP +LLRRHP+P L
Sbjct: 634 THDPLDIGIYQIREANQMIEEFMLAANISVAEKILKHFPLCSLLRRHPSPTKEMLEPLLR 693
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKD 823
S GL LD SSS +SL+ A K+D F+ LI ATR M A YFCSGD
Sbjct: 694 TASSVGLNLDVSSSKALAESLDNA----KNDDPYFNKLIRILATRCMTQAVYFCSGDLT- 748
Query: 824 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 865
+++ HY LA +YTHFTSP+RRY D++VHR L AALE KL
Sbjct: 749 FSEYYHYGLAASLYTHFTSPIRRYADVIVHRLLAAALEIAKL 790
Score = 46.6 bits (109), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
I++ H M + L G + RVN +N EAY E + +++I G + NRA +G
Sbjct: 217 IYSEHKPMSEITAGLRCGIYHQGKLRVNRYNPFEAYVGSESIGDEIVIHGRSNMNRAFDG 276
Query: 219 DFVLIKVDRLSLWAKMKGF 237
D V +++ W + K F
Sbjct: 277 DIVAVELLPQDQWHESKSF 295
>gi|6063541|dbj|BAA85401.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 908
Score = 278 bits (712), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 190/522 (36%), Positives = 271/522 (51%), Gaps = 73/522 (13%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 407
RP GRVV II+R+ W +Y GS + S V ++
Sbjct: 338 RPVGRVVGIIKRN--------------WNSY-CGSLEPMPMPAGSGGVAHALFVS---KD 379
Query: 408 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 467
+ PK+ + + L + + KR+ +VA +D W+ S +P H +
Sbjct: 380 RRIPKIRIQTRQLGNLLDKRI----------IVA--VDSWDVLSRYPSGHYV-------- 419
Query: 468 VEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLS--RKDLRNFCIFTIDPSTA 525
+L EN I FS + L+CLP +PW + E+L + R+DLR+ +F++DP
Sbjct: 420 -------VLIENDINTRPFSTQVLACLPPLPWTLSPEDLANPNRQDLRHVRVFSVDPPGC 472
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
D+DDAL L +G VGVHIADV+ FV PGT LD EA R TSVY++ ++I MLP
Sbjct: 473 RDIDDALHCTPLPNGNFEVGVHIADVTNFVHPGTPLDEEASQRGTSVYLVGQRIDMLPKP 532
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
L+E+V SL V+RLAFS+ W++ D++ ++VI+SC +SY AQ +D V
Sbjct: 533 LTEDVCSLRADVERLAFSVIWEMTPHADIISTRYTKSVIKSCAAMSYVEAQARMDDSRLV 592
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
+ + +++L ++KI++ +R GAL L +++ F D E
Sbjct: 593 DP-------------------LTVDLRNLNSLAKIMRHRRCERGALTLASAEVKFEIDSE 633
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + + N + EEFML AN + AE I + FP +LLRRHP+P L
Sbjct: 634 THDPLDIGIYQIREANQMIEEFMLAANISVAEKILKHFPLCSLLRRHPSPTKEMLEPLLR 693
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKD 823
S GL LD SSS +SL+ A K+D F+ LI ATR M A YFCSGD
Sbjct: 694 TASSVGLNLDVSSSKALAESLDNA----KNDDPYFNKLIRILATRCMTQAVYFCSGDLT- 748
Query: 824 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 865
+++ HY LA +YTHFTSP+RRY D++VHR L AALE KL
Sbjct: 749 FSEYYHYGLAASLYTHFTSPIRRYADVIVHRLLAAALEIAKL 790
Score = 46.6 bits (109), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
I++ H M + L G + RVN +N EAY E + +++I G + NRA +G
Sbjct: 217 IYSEHKPMSEITAGLRCGIYHQGKLRVNRYNPFEAYVGSESIGDEIVIHGRSNMNRAFDG 276
Query: 219 DFVLIKVDRLSLWAKMKGF 237
D V +++ W + K F
Sbjct: 277 DIVAVELLPQDQWHESKSF 295
>gi|195011855|ref|XP_001983352.1| GH15630 [Drosophila grimshawi]
gi|193896834|gb|EDV95700.1| GH15630 [Drosophila grimshawi]
Length = 1109
Score = 278 bits (712), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 157/412 (38%), Positives = 233/412 (56%), Gaps = 16/412 (3%)
Query: 456 AHVLHVFGRGGEVEPQINAILYENAICCSGFSP-----ESLSCLPCVPWEVPQEELLSRK 510
A ++ GR G +E ++ AIL+ N + P + P P V +++L++R+
Sbjct: 538 ADLVQPVGRVGNLEDELKAILFHNNL--RDVVPFEQRFNEMYAQPAAP--VGEKDLVNRR 593
Query: 511 DLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRST 570
D+R C+FTIDP TA DLDDALSIE+L + ++GVHI+DVS+++ + LD + RST
Sbjct: 594 DMRKQCVFTIDPLTARDLDDALSIEQLDENKYQIGVHISDVSHYLEENSELDNIVKKRST 653
Query: 571 SVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI-GRTVIRSCCK 629
S+Y+ I MLP L SL PG D+ AFS+FW +++ G +D+ + R+VI SC +
Sbjct: 654 SIYLANEVIHMLPQPLCFRC-SLLPGEDKYAFSVFWYMDAKGKQLDKPVFTRSVINSCTQ 712
Query: 630 LSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDG 689
+YEHAQ IID + +P + F D+V+ + L +++ ++ +RF +G
Sbjct: 713 FAYEHAQKIIDNP----GEQFTADDFPSILNGFSVEDIVKRVTWLNAIARNMRSERFVNG 768
Query: 690 ALRLENSKPVFLFDEY-GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALL 748
AL + N+K F D G P L + + N + EEFMLLAN+ A I AFP+ A+L
Sbjct: 769 ALTINNAKVRFNLDPLSGEPIGFELEKQREANHMIEEFMLLANQAVARFIHDAFPNIAIL 828
Query: 749 RRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATR 808
R HP P + L+ G LD SSS S+++ + D + L +
Sbjct: 829 RHHPPPLTKSLKALREKLLSRGYDLDYSSSKSLQASMQRLCNEANDPVAMTACLSQLLMK 888
Query: 809 PMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
PM A+YFCS + +D HYAL+ P+YTHFTSP+RRYPD++VHR L A L
Sbjct: 889 PMARANYFCSEGKTEASDLWHYALSIPIYTHFTSPIRRYPDVMVHRLLAAGL 940
>gi|307106933|gb|EFN55177.1| hypothetical protein CHLNCDRAFT_35599 [Chlorella variabilis]
Length = 1021
Score = 278 bits (711), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 193/551 (35%), Positives = 275/551 (49%), Gaps = 73/551 (13%)
Query: 334 IERLSAMISSY--PTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRS 391
I + SAM+++ P +VV II R+ R G G L K G A S
Sbjct: 338 IAQASAMVAARWRPVAAACCKVVGIIRRNWRTRGYCGSLQPP-----KSGPSGSANHTHS 392
Query: 392 SLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEES 451
L P ++P + + + KRL +VA ID W +S
Sbjct: 393 LL---------FCPVERRFPYIRIQTRQAATLADKRL----------VVA--IDCWEADS 431
Query: 452 PFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEEL--LSR 509
+P H + G G+ E + +L EN I S F+ +C+P +PW V + +L SR
Sbjct: 432 LYPSGHYVRTLGAIGDKETETEVLLIENDINTSPFTAAVHACVPPLPWAVSEADLSDPSR 491
Query: 510 KDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRS 569
DLR+ + ++DP D+DDAL + RL G +GVHIADV+ FV P TA+D EA R+
Sbjct: 492 ADLRHLAVCSVDPPGCKDIDDALHVRRLPSGSYELGVHIADVTNFVHPATAMDEEASARA 551
Query: 570 TSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCK 629
T+VY++QR+I MLP L+E++ SL V+RLAFS+ W++ +VV ++VIRS
Sbjct: 552 TTVYLVQRRIDMLPKPLTEDICSLRADVERLAFSVIWEVTPEAEVVSSQFTKSVIRSRAA 611
Query: 630 LSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDG 689
L+Y AQ ID D ++ L ++++L +++KIL+ KR G
Sbjct: 612 LTYAEAQSRID---DARLTDELSI----------------NLRTLNQLAKILRQKRADRG 652
Query: 690 ALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALL 748
AL+L + + F D E P D + + N + EE MLLAN T AE R FP ALL
Sbjct: 653 ALQLASPEVKFEIDTETHDPLDVGMYQVREANQMVEEMMLLANCTVAEFTLRHFPSCALL 712
Query: 749 RRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFH------------------QSLEQARE 790
RRHP P R+ + G+ +D S+S QSL++A
Sbjct: 713 RRHPVPPPRQFEPLLRAAAAAGISIDPSTSKARRLGGAATPARCPPPASDPAQSLDRA-- 770
Query: 791 KLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPD 849
++ D F+ LI ATR M A Y SG+ ++ HY LA P+YTHFTSP+RRY D
Sbjct: 771 -VRADDPYFNKLIRIMATRCMTTAVYLSSGELS-APEYHHYGLAAPLYTHFTSPIRRYAD 828
Query: 850 LVVHRTLNAAL 860
++VHR L AAL
Sbjct: 829 VIVHRVLMAAL 839
Score = 47.0 bits (110), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R +++ H M + ++ G + + RVN N E + E V D+LI+G NRA
Sbjct: 227 RQRVYEEHRLMSDIAAGMKAGRYHQGMLRVNRFNSFEGWVGSESVGQDILISGRIDMNRA 286
Query: 216 VEGDFVLIKVDRLSLWAKMKGFSNN 240
+EGD V +++ W +G SN
Sbjct: 287 MEGDVVAVELLPEEQW---RGPSNK 308
>gi|417405713|gb|JAA49560.1| Putative exosomal 3'-5' exoribonuclease complex subunit [Desmodus
rotundus]
Length = 1054
Score = 278 bits (711), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 180/522 (34%), Positives = 284/522 (54%), Gaps = 38/522 (7%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 330 PTGRVVGILQKN-WRDYVVTFPSREE-VQSQG---KNAQK------------ILVTPWDY 372
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK I+ ++ +A + +V R+D W S +P H + V GR G++
Sbjct: 373 RIPK-----------IRISTQQAEALQDFRVVV-RVDSWESTSVYPNGHFVRVLGRIGDL 420
Query: 469 EPQINAILYENAICCSGFSPESLSCLPC----VPWEVPQEELLSRKDLR-NFCIFTIDPS 523
E +I IL EN+I + FS + +P PW V EE R+DLR +F+IDP
Sbjct: 421 EGEIATILVENSISVAPFSEAQMCEMPVNTPEKPWTVSPEEERERRDLRKTHLVFSIDPK 480
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
D+DD LS+ L+DG +GVHIADV++FV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 481 GCEDVDDTLSVRTLNDGALELGVHIADVTHFVKPNSCIDIEARTRATTYYLADRRYDMLP 540
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLN-SAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
+LS ++ SL GVDR A S+ W+L+ ++ ++ W GRT+IRS KL YE AQ+++DG
Sbjct: 541 SILSADLCSLLGGVDRYAVSVMWELDKTSYEIKKVWYGRTIIRSAYKLCYEAAQELLDGN 600
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
F++ + + + ++V ++ L ++++ ++ KR GAL LE +
Sbjct: 601 FNIIDDIPEFRDLDETSRRAKLEELVWAVGKLTDIARHVRAKRDRCGALELEGVEVRVQL 660
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
DE +D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 661 DEQKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 720
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
G +DT S+ SL+ A + +D ++ +L + AT+ M A YF +G
Sbjct: 721 RECAKAKGFFIDTRSNKTLADSLDNAND--PNDPIVNRLLRSMATQAMSNALYFSTGSCS 778
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
++ ++ HY LA YTHFTSP+RRY D++VHR L AA+ +K
Sbjct: 779 EE-EFHHYGLALDKYTHFTSPIRRYSDIIVHRLLMAAISNDK 819
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 144 NKDDNPSHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHN-RLEAYCKIEGVQT 202
++ + S E+ K + H E + ++ G + + +VN H ++EA+ +++G +
Sbjct: 209 SRRERESESQESHRKEYPEHLPQEVLEAGIKSGRYIQGILKVNKHRAQIEAFVRLQGASS 268
Query: 203 -------DVLITGIAAQNRAVEGDFVLIKVDRLSLW 231
D+LI G+ A+NR++ GD V +++ + W
Sbjct: 269 KDSGLVSDILIHGMKARNRSIHGDVVAVELLPKTEW 304
>gi|195440166|ref|XP_002067913.1| GK11362 [Drosophila willistoni]
gi|194163998|gb|EDW78899.1| GK11362 [Drosophila willistoni]
Length = 1235
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 158/411 (38%), Positives = 231/411 (56%), Gaps = 13/411 (3%)
Query: 456 AHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQ---EELLSRKDL 512
A ++ GR G +E ++ AIL+ N + P E P +L +R DL
Sbjct: 589 ADLIQPVGRVGNLEDELKAILFHNGL--RDIKPYKQHFEDLFSEEAPPVTPNDLHNRCDL 646
Query: 513 RNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSV 572
R CIFTIDP TA DLDDA+SIE+L D + VGVHI+DVS+++L LD + RSTS+
Sbjct: 647 RTKCIFTIDPLTARDLDDAMSIEKLDDNVFEVGVHISDVSHYLLEDGELDNIVKERSTSI 706
Query: 573 YMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV--DRWIGRTVIRSCCKL 630
Y++ + I MLP L SL PG+D+ AFS+FW +N+ G ++ + R+VI SC +
Sbjct: 707 YLVNQVIHMLPRALCLRC-SLLPGIDKFAFSVFWKMNANGQLLCPEPVFTRSVINSCTQF 765
Query: 631 SYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGA 690
+YEHAQ IID + N + +P + F DV+ + L+ +++ ++ RF GA
Sbjct: 766 AYEHAQKIIDNPHE----NFADDDFPSILNGFHVEDVMERVLWLHNIAQNMRKARFEQGA 821
Query: 691 LRLENSKPVFLFDEY-GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLR 749
L + N+K F D G P + + + N + EEFMLLAN++ A I +P+ +LR
Sbjct: 822 LTINNAKLRFTLDPLNGEPISFEVEKQREANRMIEEFMLLANQSVARHIHTKYPEICVLR 881
Query: 750 RHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRP 809
HP P ++ L+ G LD SSS +S+ + ++ D + L +P
Sbjct: 882 NHPPPLVKSLKSLREKFVALGFDLDYSSSKTLQESMVRLCQEAPDPIAMNACLSQLLMKP 941
Query: 810 MQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
M ASYFCS + +D HYAL+ P+YTHFTSP+RRYPD++VHR L A+L
Sbjct: 942 MARASYFCSEGKTEPSDLWHYALSIPIYTHFTSPIRRYPDVMVHRLLAASL 992
>gi|194206544|ref|XP_001918133.1| PREDICTED: DIS3 mitotic control homolog (S. cerevisiae)-like [Equus
caballus]
Length = 1035
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 179/522 (34%), Positives = 281/522 (53%), Gaps = 38/522 (7%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 311 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 353
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK I+ ++ +A + +V RID W S +P H + V GR G++
Sbjct: 354 RIPK-----------IRISTQQAEALQDFRVVV-RIDSWESTSVYPNGHFVRVLGRIGDL 401
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLR-NFCIFTIDPS 523
E +I IL EN+I FS + +P PW+V E+ R+DLR +F+IDP
Sbjct: 402 EAEIATILVENSISVVPFSEAQMCEMPVNTPENPWKVNPEDERERRDLRKTHLVFSIDPK 461
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
D+DD LS+ L +G +GVHIADV++FV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 462 GCEDVDDTLSVRTLHNGNLELGVHIADVTHFVAPNSYIDIEARTRATTYYLADRRYDMLP 521
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLN-SAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
+LS ++ SL GVDR A S+ W+L+ ++ ++ W GRT+IRS KL YE AQ+++DG
Sbjct: 522 SVLSADLCSLLGGVDRYAVSVMWELDKTSYEIKKVWYGRTIIRSAYKLFYEAAQELLDGN 581
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
+ + + ++V +I L ++++ ++ KR GAL LE +
Sbjct: 582 VSIVDDIPEFRNLDEKSREARLKELVWAIGKLTDIARHVRAKRDRCGALELEGVEVRVQL 641
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
DE +D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 642 DEKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 701
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
G +DT S+ SL++A + +D ++ +L + AT+ M A YF +G
Sbjct: 702 RECAKAKGFVIDTRSNKTLADSLDKAND--PNDPIVNRLLRSMATQAMSNALYFSTGSCA 759
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
++ ++ HY LA YTHFTSP+RRY D++VHR L AA+ +K
Sbjct: 760 EE-EFHHYGLALDKYTHFTSPIRRYSDIIVHRLLMAAISKDK 800
Score = 43.9 bits (102), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Query: 154 EARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHN-RLEAYCKIEGVQT-------DVL 205
E K + H +E + ++ G + VN H ++EA+ +++G + DVL
Sbjct: 200 EGHGKEYPEHLPLEVLEAGIKSGRYIQGTLNVNKHRAQIEAFVRLQGASSKDSGLVSDVL 259
Query: 206 ITGIAAQNRAVEGDFVLIKV 225
I G+ A+NR++ GD V++++
Sbjct: 260 IHGMKARNRSIHGDVVVVEL 279
>gi|219116793|ref|XP_002179191.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409082|gb|EEC49014.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 593
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 190/553 (34%), Positives = 268/553 (48%), Gaps = 73/553 (13%)
Query: 447 WNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC---------- 496
W +P + V G+ +E +I A+L E+ + F E L +
Sbjct: 12 WECTQRWPPCQNVQVLGKSCILENEIQALLLEHDVDHGDFDREVLQNVENAVASGVFVTS 71
Query: 497 ---VPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSY 553
+ W+ E R+D R+ IFTIDP+TA DLDDAL + +L+DG +GVHIADVSY
Sbjct: 72 TGELGWKPTPEMYAGRRDYRDARIFTIDPTTAKDLDDALHVTKLADGRVEIGVHIADVSY 131
Query: 554 FVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGD 613
FV P + +D EAQ R+T+VY++ R +PMLP L E SLN V+RLAFS W +N G
Sbjct: 132 FVRPDSPVDTEAQYRATTVYLVDRTVPMLPRPLCEVACSLNENVERLAFSCVWTMNVDGT 191
Query: 614 V------VDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV-ESSNTLGEG-WPQ---LYGQF 662
V D W GR+VI+SC +L Y AQ+IIDGK ES + E WP+ G
Sbjct: 192 VRQKNGNPDVWYGRSVIKSCARLDYATAQNIIDGKVGRGESDKAIDEALWPESRRPTGGH 251
Query: 663 EWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYG-TPYDSVLSGREDLNF 721
+ V + ++ ++ V+ + RF +GAL L K F D G TP + D N
Sbjct: 252 TTAQVAQDVRLMHRVAMARRQLRFDNGALALNGIKLTFQLDTDGQTPLLAAPYPLRDSNR 311
Query: 722 LFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFC-SKHGLQLDTSSSGQ 780
L EE+ML+AN AE + A+LRRHP P L + + + G +D SSS
Sbjct: 312 LVEEYMLMANYLVAERLITHTGRRAMLRRHPEPLEDGLDKVASVAKAGMGFNVDISSSQA 371
Query: 781 FHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHF 840
H SL + + D VL + PMQ A YF +G D W H+AL P YTHF
Sbjct: 372 LHASLCRLGRECSDPLVL-QCVTQMLMTPMQPADYFAAGTM-DMAAWKHFALNIPYYTHF 429
Query: 841 TSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESL 900
TSP+RRY D++VHR L A ++ E V+ L D DA ES
Sbjct: 430 TSPIRRYADVIVHRLLQATIDGP----------------EAVQTFPL-----DTDAVES- 467
Query: 901 EGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLFSC 960
+A HCN++++A + ++ C ++++ + +K K +
Sbjct: 468 -----------------------IAAHCNEKRMASKKAQERCDRVFLSLFVKAKPMKSQL 504
Query: 961 LILYLTSFSTIHV 973
I+ ST V
Sbjct: 505 GIVLSVGVSTFTV 517
>gi|71412692|ref|XP_808518.1| ribonuclease II-like protein [Trypanosoma cruzi strain CL Brener]
gi|70872742|gb|EAN86667.1| ribonuclease II-like protein, putative [Trypanosoma cruzi]
Length = 892
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 214/647 (33%), Positives = 321/647 (49%), Gaps = 58/647 (8%)
Query: 315 TSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIER-SPRRDGIVGFLNVN 373
D+T + SS + A L+ + + K+P G VV+++ER SP V
Sbjct: 139 VQDTTRRDDSSPERQW--ARRMLAPTVHDWGNKKPFGVVVAVLERRSP-------LFVVA 189
Query: 374 QWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDA 433
+ + K +R Y + P P + V +D+P + L++
Sbjct: 190 RLCDDALAPNDIVKSDR---------YYKFKCFDPLMPNIAVFGRDIPVPLHATLKK--T 238
Query: 434 TIEMELVAARIDEWNEES-PFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLS 492
+ LV E+ + F ++ V G V A+ I + FS E+ +
Sbjct: 239 FFFLRLVTRGDGEFFWTAWKFLTGKIVRVLGGVDSVRANSFALCNAFEISMNDFSDEAYA 298
Query: 493 CLPCVPWEVPQEELL---SRKDLRNF-CIFTIDPSTATDLDDALSIERLSDGISRVGVHI 548
C+P +EVP +++L R+DLR + +IDP+TA DLDDALSI G RVGVHI
Sbjct: 299 CVP-EEFEVPDKQVLLHMGRRDLREEEFVCSIDPATARDLDDALSITSTPGGY-RVGVHI 356
Query: 549 ADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDL 608
ADVSYFV G+ LD EA+ RSTSVY++++ IPMLP LSE+ SLNPG D+ AFS + L
Sbjct: 357 ADVSYFVSAGSPLDEEARERSTSVYLVEQVIPMLPRKLSEDYCSLNPGSDKFAFSCIFHL 416
Query: 609 NSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVV 668
+ G+V W G++VIR+ C+L+YE AQ I+DG V + G+ + + +
Sbjct: 417 DHHGNVKSEWFGQSVIRNRCRLTYEDAQRILDGDKTVFDTLDFGD---EKDVRHLCVRIE 473
Query: 669 RSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGT---PYDSVLSGREDLNFLFEE 725
SI++L+E++ ++ G L + N K +LF++ PY +S + + N+L EE
Sbjct: 474 VSIRTLFELASKMRSASMNRGRLTIGNMKVRYLFEDIANPTFPYGFGISRQIEANWLVEE 533
Query: 726 FMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSL 785
FMLLAN AE I PD ALLRRH P+ +KL + S GL+L SS L
Sbjct: 534 FMLLANARVAEKIVEYMPDQALLRRHEPPDRKKLLTLKEALSSVGLELRGGSSKSLQGFL 593
Query: 786 EQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLR 845
E + D Y +++ Y+ ++ A YF +G + + GHYALA P YTHFTSP+R
Sbjct: 594 ENTKN--SDFYDELCVVLKYS---LKQAVYFVNGCEETEAYRGHYALALPWYTHFTSPIR 648
Query: 846 RYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREA 905
RY D++ HR L ALE E + K + PK G +A
Sbjct: 649 RYSDIIAHRQLLCALEIESIV-KESKGGPKERRHPVSPGSI-----------------DA 690
Query: 906 LSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLK 952
++ KY P +++ ++ N +K+ R V DA + ++ LK
Sbjct: 691 NQLSTRKYFYPVSEV-ESIVEKANLKKIKARQVSDASLGIFFCYYLK 736
>gi|357611416|gb|EHJ67473.1| hypothetical protein KGM_03529 [Danaus plexippus]
Length = 974
Score = 278 bits (710), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 183/524 (34%), Positives = 271/524 (51%), Gaps = 66/524 (12%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTG+VV II R R+ + + + G +R TP
Sbjct: 337 PTGKVVGIIRRKWRQ-----YCGILLPSKFPGATRH-----------------LFTPAEK 374
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ P+ ++ + D I ++ A +D W S +P H + G G+
Sbjct: 375 RIPR-----------VRIETRQSDILISQRILVA-LDSWPRNSRYPLGHFVRSLGPIGDK 422
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDL 528
+ + IL E+ + + FS L+CLP +++P+EE+ R DLR+ CI ++DP TD+
Sbjct: 423 DAENEVILLEHDVPHARFSEAVLACLPPDDFKIPEEEIKKRVDLRSICICSVDPPGCTDI 482
Query: 529 DDALSIERLS----DGIS--RVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPML 582
DDAL L DG++ VGVHIADV+YFV P TALD EA RST+VY++ R+I M+
Sbjct: 483 DDALHARPLPGLSPDGLNTYEVGVHIADVTYFVRPNTALDREAAARSTTVYLVDRRIDMV 542
Query: 583 PVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIR-SCCKLSYEHAQDIIDG 641
P LLS + SL G +RLAFS W ++ +V+ ++VI+ S ++YE AQ ID
Sbjct: 543 PGLLSSNLCSLRGGEERLAFSCVWVVDENANVLSTKFHKSVIKMSSSAMTYEEAQIAIDD 602
Query: 642 KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFL 701
+ ++ S+++L ++K LK KR +GAL L + + F
Sbjct: 603 ATRCD-------------------EIASSLRTLNSLAKKLKQKRLDNGALLLASPEIRFQ 643
Query: 702 FD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLR 760
D E P + D N + EEFMLLAN + AE +A +P ALLRRHP+P +
Sbjct: 644 VDSETHDPIEVQAKKIMDTNSMVEEFMLLANVSVAERVAADYPRCALLRRHPSPQLHSFD 703
Query: 761 EFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSG 819
F + G +LD S++ F +SL +A + D F+ L+ ATR MQ A YF SG
Sbjct: 704 TFLKAARQQGFELDVSTNKSFSKSLNEA---VIPDRPFFNTLLRIMATRCMQQAVYFPSG 760
Query: 820 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE 863
+ ++ HY LA P+YTHFTSP+RRY D++VHR L A++ A+
Sbjct: 761 T-RTQEEFYHYGLACPIYTHFTSPIRRYADVIVHRLLAASIGAD 803
>gi|187608139|ref|NP_001120564.1| DIS3 mitotic control homolog [Xenopus (Silurana) tropicalis]
gi|171847251|gb|AAI61523.1| dis3 protein [Xenopus (Silurana) tropicalis]
Length = 951
Score = 278 bits (710), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 181/545 (33%), Positives = 275/545 (50%), Gaps = 67/545 (12%)
Query: 328 NDGMNAIERLSAMISSY--PTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRK 384
+D + ++E M+ + K+P+G+VV II+R+ W Y G S+
Sbjct: 313 SDDIESVEEKEKMLKTAVNSVKKPSGQVVGIIKRN--------------WRPYCGMLSKS 358
Query: 385 DAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAAR 443
K++ L TP + P++ R+E A T+E + +
Sbjct: 359 QIKESTRHL---------FTPAERRIPRI-------------RIETRQASTLEGQRIIVA 396
Query: 444 IDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQ 503
+D W S +P H + G G+ E + +L E+ + FS LS LP +PW +
Sbjct: 397 VDGWPRNSRYPNGHFVKSLGTAGDKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWTITP 456
Query: 504 EELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDI 563
E++ +R DLR+ + ++DP TD+DDAL L +G VGVHIADVS+F+ PG ALD
Sbjct: 457 EDMKNRIDLRHLYVCSVDPPGCTDIDDALHCRELENGTLEVGVHIADVSHFIRPGNALDQ 516
Query: 564 EAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTV 623
E+ R T+VY+ ++I M+P LLS + SL VDRLAFS W+++ ++++ ++V
Sbjct: 517 ESSNRGTTVYLCDKRIDMVPELLSSNLCSLRSNVDRLAFSCIWEVDENANILNTKFTKSV 576
Query: 624 IRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKD 683
I S L+Y AQ ID P + + + +S++ L +++KILK
Sbjct: 577 INSKASLTYAEAQMRIDS--------------PNMNDE-----ITQSLRLLNKLAKILKK 617
Query: 684 KRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAF 742
+R +GAL L + + F D E P D ++ N + EEFMLLAN + A+ I F
Sbjct: 618 RRIDNGALTLSSPEVRFHMDSETHDPIDLQTKELKETNSMVEEFMLLANISVAQKIYDEF 677
Query: 743 PDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDIL 802
+ ALLR+HP+P L + T S+ SL++A + + L
Sbjct: 678 SEYALLRKHPSPPPANYDILVKAAKSKNLDIKTDSAKALADSLDKAESP---GFPYMNTL 734
Query: 803 IN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 861
+ ATR M A YFCSG D D+ HY LA P+YTHFTSP+RRY D++VHR L A+
Sbjct: 735 LRILATRCMMQAVYFCSG---MDNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAVG 791
Query: 862 AEKLY 866
A+ Y
Sbjct: 792 ADSTY 796
>gi|71755977|ref|XP_828903.1| exosome complex exonuclease RRP44 [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|70834289|gb|EAN79791.1| exosome complex exonuclease RRP44, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 895
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 210/653 (32%), Positives = 320/653 (49%), Gaps = 58/653 (8%)
Query: 313 PSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPT------KRPTGRVVSIIERSPRRDGI 366
P T + + N+ N L+ M+S+ PT K+P+G V++++ER
Sbjct: 117 PDGRRITRWIRDTTMNNRKNREMWLAEMMSA-PTQHNWHGKKPSGSVIAVLER------- 168
Query: 367 VGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKK 426
+ DA ++ + DR + + P + V +D+P S+++
Sbjct: 169 ------KHPLLFVARLADDALSSQEVIQ--DRRFYRFKVFDQLLPHIAVFGRDIPFSLRE 220
Query: 427 RLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGF 486
+ E + +E W ES FP A ++ FG + AI + I F
Sbjct: 221 SIRERFYLLRLETTTGGDIVW-VESRFPTARIISTFGSVHSLRANTFAICSAHHIVTDDF 279
Query: 487 SPESLSCLPCVPWEVPQEEL--LSRKDLRNF-CIFTIDPSTATDLDDALSIERLSDGISR 543
S E+ +C+P EE+ R+DLR + +IDP+TA DLDDALSI L G R
Sbjct: 280 SEEACNCIPDRLIIPNSEEMKRTGRRDLRREEFVCSIDPATARDLDDALSITLLPGGY-R 338
Query: 544 VGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFS 603
VGVHIADVS+FV PG+ALD E + R+TSVY++ R MLP LSEE SL+PG D+LAFS
Sbjct: 339 VGVHIADVSHFVSPGSALDEEGRARATSVYLVDRVYHMLPRKLSEEYCSLHPGSDKLAFS 398
Query: 604 IFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFE 663
+ L+ G + W G++VIR+ C+LSY+ AQ IIDG + G +
Sbjct: 399 AIFQLDLNGKLKGEWFGKSVIRNRCRLSYDDAQRIIDGNLTTLDALDYGGVTDRRELSQL 458
Query: 664 WSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSV---LSGREDLN 720
V S+K L++++ L+ F G L + F F++ P + + + + N
Sbjct: 459 KERVATSVKHLFDLASKLRAASFERGRLAFSTPEIGFHFEDISNPTHPIGFNVHRQIEAN 518
Query: 721 FLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQ 780
+L EEFMLLAN A+ I + PD A+LR HP P + + ++ ++L G+
Sbjct: 519 WLVEEFMLLANLRVAQKIVQYLPDQAILRVHPPPKRVLFEQLKLSLARVNIEL----KGR 574
Query: 781 FHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGD-FKDDTDWGHYALAFPVYTH 839
++SLEQ ++ D+ L D + + LA Y +G+ F + GHYAL YTH
Sbjct: 575 SNKSLEQLLNSVR-DHPLRDEISIMVKNTLSLAKYCTNGENFTNKVPLGHYALGLEWYTH 633
Query: 840 FTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAES 899
FTSP+RRY D++VHR L ALE E + K HR G K A +
Sbjct: 634 FTSPIRRYADIIVHRQLLCALEIESIV--------KGKHRTG------------KTCAGA 673
Query: 900 LEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLK 952
+ G E + + ++ +++ N+A CN+ K A +V +A +KL+ LK
Sbjct: 674 V-GMEVECLDSAEFFTSTYEVM-NIADECNENKRAADSVSEASLKLFFCHYLK 724
>gi|307197887|gb|EFN78986.1| DIS3-like exonuclease 2 [Harpegnathos saltator]
Length = 996
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 175/541 (32%), Positives = 278/541 (51%), Gaps = 47/541 (8%)
Query: 355 SIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDR---------------- 398
SII+R+ DG + +N N++ + +K + + + D+
Sbjct: 331 SIIDRNRAFDGDLVVARINPEENWQILANGKIQKTGTVICILDKLHPRKAIGYLTQHVRK 390
Query: 399 --EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQA 456
Y+ + P + P + + K +P+ K+ + I + + I+ W + S
Sbjct: 391 CKPYVLIKPKDIRIPLIRIPSKSMPNLYHKQPNLYNNVIFLIV----INHWTQPS-HASG 445
Query: 457 HVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFC 516
+L + G G++ ++ AIL EN + S + E L LP + + +++ R+D N C
Sbjct: 446 EILQIVGESGDLNAEVTAILLENNLDVSPYRQELLQGLPDSDYVLTNADIMGREDWSNEC 505
Query: 517 IFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQ 576
+FTIDP+TA DLDDA+S + L +G VGVHI+DV++++ + LD R+T+VY+
Sbjct: 506 VFTIDPATAVDLDDAVSCKVLKNGNYEVGVHISDVTHYLELFSPLDKAISKRATTVYLPH 565
Query: 577 RKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQ 636
MLP L V SL PG D+LAFS+ W+L G++V++ +TVIRSCC+LSY+ AQ
Sbjct: 566 TSYHMLPEQLC-RVCSLLPGKDKLAFSVIWELTPDGEIVEQRFAKTVIRSCCQLSYDLAQ 624
Query: 637 DIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENS 696
+ID +V S L + G F + ++ +L+++S L++KRF++GAL L+
Sbjct: 625 IMIDNPEEVLSDKVLD-----IKGNFTALSLSNTVNNLFKLSTSLRNKRFSNGALSLDQP 679
Query: 697 KPVFLFD-----EYG--TPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLR 749
K D E+G P + L R D N L EEFMLLAN T A + P++ALLR
Sbjct: 680 KIHICMDPKIMREHGISVPVNYQLEERRDSNRLIEEFMLLANMTVAAQLYSTIPETALLR 739
Query: 750 RHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD----------DYVLF 799
H P L K+G+ LD ++G + S+++ L + +V+
Sbjct: 740 IHRDPIKHSLVTIHETLRKYGIHLDIETAGALNASIQRYERDLLECNSSTMNNTMQHVIM 799
Query: 800 DILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAA 859
++ N ++ M A Y C+ D HYAL P+YTHFTSP+RRY D +VHR L A
Sbjct: 800 -VITNLCSKAMTRAEYKCASAVTSSDDLKHYALNVPLYTHFTSPIRRYSDCIVHRLLYAT 858
Query: 860 L 860
+
Sbjct: 859 I 859
>gi|407420272|gb|EKF38527.1| mitochondrial exoribonuclease DSS-1, putative [Trypanosoma cruzi
marinkellei]
Length = 893
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 213/630 (33%), Positives = 317/630 (50%), Gaps = 63/630 (10%)
Query: 336 RLSA-MISSYPTKRPTGRVVSIIER-SPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSL 393
R+SA + + K+P+G VV+I+ER SP + +D + +
Sbjct: 157 RMSAPTVHDWGNKKPSGVVVAILERRSPL---------------FVVARLRDDALAPNEI 201
Query: 394 SVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDE--WNEES 451
DR Y Q P P + V +D+P + L++ + LV E W
Sbjct: 202 VKSDR-YYQFKCFDPLMPNIAVFGRDIPVPLHATLDKN--FFFLRLVTRGDGEFFWTAWR 258
Query: 452 PFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELL---S 508
F ++ V G V A+ I FS E+ +C+P +EVP +++L
Sbjct: 259 -FLTGKIVRVLGGVDSVRANSFALCNAFEISMDDFSEEAYACVP-EEFEVPDKQVLLQMG 316
Query: 509 RKDLRNF-CIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQV 567
R+DLR + +IDP+TA DLDDALSI G RVGVHIADVSYFV G+ LD EA+
Sbjct: 317 RRDLREEEFVCSIDPATARDLDDALSITSTPGGY-RVGVHIADVSYFVPTGSPLDEEARE 375
Query: 568 RSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSC 627
RSTSVY++++ IPMLP LSE+ SLNPG D+ AFS + L+ G+V W G++VIR+
Sbjct: 376 RSTSVYLVEQVIPMLPRKLSEDYCSLNPGSDKFAFSCIFHLDHHGNVKSEWFGQSVIRNR 435
Query: 628 CKLSYEHAQDIIDGKFDVESSNTLGE--GWPQLYGQFEWSDVVRSIKSLYEVSKILKDKR 685
C+L+YE AQ I+DG V + G+ L+ + E SI++L+E++ +++
Sbjct: 436 CRLTYEEAQRILDGDKTVFDTLDFGDEKDVRHLHVRTE-----ASIRTLFELASKMRNAS 490
Query: 686 FTDGALRLENSKPVFLFDEYGT---PYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAF 742
+ G L + N K +LF++ PY +S + + N+L EEFMLLAN AE I +
Sbjct: 491 LSRGRLTIGNMKVRYLFEDIDNPTFPYGFEISRQIEANWLVEEFMLLANARVAEKIVQYM 550
Query: 743 PDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDIL 802
PD ALLRRH P+ +KL S L+L SS L+ A+ D Y +
Sbjct: 551 PDQALLRRHEPPDRKKLLTLREAVSSVALELRGGSSKSLQVFLDNAKN--SDFYDELCVA 608
Query: 803 INYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEA 862
+ Y+ ++ A YF +G + + GHYALA P YTHFTSP+RRY D++ HR L ALE
Sbjct: 609 LKYS---LKQAVYFVNGCEETEAYRGHYALALPWYTHFTSPIRRYSDIIAHRQLLCALEI 665
Query: 863 EKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILV 922
E + + + PK G + ++ KY P +++
Sbjct: 666 ESIV-QESKGGPKERRHPVSPGSI-----------------DVNQLSTRKYFYPVSEV-E 706
Query: 923 NVATHCNDRKLACRNVKDACVKLYMWILLK 952
++ + N +KL R V DA + ++ L+
Sbjct: 707 SIVENANVKKLKARQVSDASLGIFFCYYLR 736
>gi|449471783|ref|XP_002198134.2| PREDICTED: DIS3-like exonuclease 1 [Taeniopygia guttata]
Length = 971
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 184/521 (35%), Positives = 276/521 (52%), Gaps = 46/521 (8%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTG+VV II+++ RD +V F K S + + + +TP
Sbjct: 247 PTGKVVGIIQKN-WRDYVVTF----------------PSKEESQSQGRNAQKVLVTPWDY 289
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK I+ ++ +A E +V RID W S +P H + V GR G++
Sbjct: 290 RIPK-----------IRISTQQAEALQEYRVVV-RIDSWESTSLYPNGHFVRVLGRIGDL 337
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLRN-FCIFTIDPS 523
E +I AIL EN+IC + FS +S +P PW+V EE R DLR+ IF+IDP
Sbjct: 338 EGEIAAILVENSICAAPFSEIQMSEMPASSPKNPWKVSPEEEKKRLDLRDTHLIFSIDPK 397
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
D+DDALS+ L +G +GVHIADV++FV + D+EA+ R+T+ Y+ R+ MLP
Sbjct: 398 GCEDVDDALSVRTLPNGNLELGVHIADVTHFVAANSYTDVEARARATTYYLADRRYDMLP 457
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
+LS ++ SL GVDR A S+ W+L +++ RT+IRS KL YE AQ ++DG
Sbjct: 458 SVLSADLCSLLSGVDRYAVSVLWELEKESYEMLSVQYTRTLIRSAYKLEYETAQGLLDGD 517
Query: 643 F----DVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKP 698
D+ +L EG Q + +++V ++ L ++++ ++ +R GAL LE +
Sbjct: 518 TSVVGDILELKSLDEG----TRQKKLAELVWAVSKLTDIARHVRAERDRCGALELEGIEI 573
Query: 699 VFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRK 758
D+ +D + +++ E M+LAN A+ IA AFP ALLR+HP P
Sbjct: 574 RVQLDDKRNIHDLIPKQPLEVHETVAECMILANHWVAKRIAEAFPHQALLRQHPPPRQEF 633
Query: 759 LREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCS 818
E S G +DT S+ +SL++A + D ++ +L + AT M A YF +
Sbjct: 634 FTELRDCASAKGFSIDTRSNKALAESLDRAND--PSDPIVNKLLRSMATHAMSNALYFST 691
Query: 819 GDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAA 859
G ++ + HY LA YTHFTSP+RRY D+VVHR L AA
Sbjct: 692 GSCPEE-QFHHYGLALEKYTHFTSPIRRYADIVVHRLLLAA 731
Score = 48.5 bits (114), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 145 KDDNPSHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHN-RLEAYCKIEGV--- 200
+ + S E K + H +E + ++ G + VN H +LEA+ +++G+
Sbjct: 127 RRERESESQENHGKEYPEHLPVEVLEAGIKSGRYLQGALNVNKHRAQLEAFVRLQGIGSK 186
Query: 201 ----QTDVLITGIAAQNRAVEGDFVLIKVDRLSLW 231
Q+D+LI G A+NRA+ GD V++++ + W
Sbjct: 187 DTELQSDILIYGAKARNRAIHGDVVVVELLPVHEW 221
>gi|119500108|ref|XP_001266811.1| exosome complex exonuclease exoribonuclease (Rrp44), putative
[Neosartorya fischeri NRRL 181]
gi|119414976|gb|EAW24914.1| exosome complex exonuclease exoribonuclease (Rrp44), putative
[Neosartorya fischeri NRRL 181]
Length = 1034
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 223/725 (30%), Positives = 336/725 (46%), Gaps = 134/725 (18%)
Query: 155 ARCKIFAP-HWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQN 213
AR ++F P ++SM + L G + ++ V+ +N LE + +LI G N
Sbjct: 250 ARGELFYPEYYSMSKIMTGLRAGTLHQGVFSVSPYNYLEGSVNVAAFDKPLLILGRDNSN 309
Query: 214 RAVEGDFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEY 273
RA+ GD V+I+V LP + ++
Sbjct: 310 RAIAGDVVVIEV-----------------------LPKD-----------------QWKS 329
Query: 274 SNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNA 333
+ L+ E+ + +D+ +E N+E++ TEK + Q + A
Sbjct: 330 PSTKLVDEEAVTRNDNPEAED-NEEVV------------------TEKERKALQEEVKKA 370
Query: 334 IERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSL 393
+ S +PT +VV +I+R+ R+ VG ++ +G + A R
Sbjct: 371 HGK-----HSEGRPQPTAKVVGVIKRNWRQ--YVGHVD-------QGSTGASASSGRR-- 414
Query: 394 SVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPF 453
++ + + P + PK+ V + D + +R + ID W+ +S +
Sbjct: 415 ----QQNVFVLPMDKRIPKIRVRTRQASDLLGQR------------ILVTIDAWDRDSRY 458
Query: 454 PQAHVLHVFG----RGGEVEPQINAILYENAICCSGFSPESLSCLP--CVPWEVPQEE-- 505
P H + G +G E E A+L E + F L CLP W VP ++
Sbjct: 459 PTGHFIRSLGELETKGAETE----ALLLEYDVQYKPFPKAVLDCLPPEGHDWRVPADKEH 514
Query: 506 --LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDI 563
R+DLR+ + +IDP D+DDAL L +G VGVHIADVS+FV P A+D+
Sbjct: 515 VGWKGRRDLRDILVCSIDPPGCQDIDDALHARALPNGNFEVGVHIADVSHFVKPNNAMDL 574
Query: 564 EAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTV 623
EA VR T+VY++ ++I MLP LL ++ SL P V+R AFS+ W++ +VV ++V
Sbjct: 575 EASVRGTTVYLVDKRIDMLPHLLGTDLCSLKPYVERYAFSVLWEMTPNAEVVSAEFTKSV 634
Query: 624 IRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKD 683
IRS SYE AQ ID S N ++ +S+++L +SKIL+
Sbjct: 635 IRSREAFSYEQAQMRIDDP----SQN---------------DELTQSMRTLLRLSKILRQ 675
Query: 684 KRFTDGALRLENSKPVFLF--DEYGTPYDSVLS-GREDLNFLFEEFMLLANKTAAEVIAR 740
KR GAL L + + DE G P V + N L EEFML AN T A I
Sbjct: 676 KRMDAGALNLASPEVRIETDSDEVGDPLTDVKTKAMLATNSLVEEFMLHANITVAAKIYD 735
Query: 741 AFPDSALLRRHPAPNMRKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLF 799
+F +ALLRRH P + E K L+LD SSS SL++ + + F
Sbjct: 736 SFSQTALLRRHATPPPQNFEELINQLSKKRNLELDVSSSRALADSLDRC---VDPENPFF 792
Query: 800 DILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNA 858
+ L+ ATR M A YFC+G ++++ HY LA P+YTHFTSP+RRY DL+VHR L A
Sbjct: 793 NTLVRILATRCMTSAEYFCAGAHA-ESEFRHYGLASPIYTHFTSPIRRYADLLVHRQLAA 851
Query: 859 ALEAE 863
A+ E
Sbjct: 852 AIGYE 856
>gi|452820942|gb|EME27978.1| exoribonuclease R [Galdieria sulphuraria]
Length = 1013
Score = 277 bits (708), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 160/427 (37%), Positives = 237/427 (55%), Gaps = 24/427 (5%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 499
+ ID W S FP HV+ G G++E + +L+EN+I F L CLP
Sbjct: 474 IVVSIDSWERNSMFPSGHVIEELGVEGDIETETKVLLHENSIITRAFPKAVLECLPADDL 533
Query: 500 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 559
+ + L +RKDL++ CIF+IDP TD+DDALSI+ + VGVHIADV+ F+ T
Sbjct: 534 QFSPDMLKNRKDLQSLCIFSIDPPGCTDIDDALSIQLDENHNYMVGVHIADVTSFISRDT 593
Query: 560 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 619
ALD EA RST+VY+ R+I MLP LS ++ SL RLAFS F ++ G+V+
Sbjct: 594 ALDKEAADRSTTVYLADRRIEMLPPRLSSDLCSLKENETRLAFSAFITIDHEGNVLHYDF 653
Query: 620 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 679
RT+IRS +Y AQD ++ E+ E +++ S+ L ++++
Sbjct: 654 ARTIIRSRKAFTYAEAQDYLNQARKKETK--------------ECTEIELSLLRLMDIAQ 699
Query: 680 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSV-LSGREDLNFLFEEFMLLANKTAAEVI 738
L+ +RF +GALRL + + F D+ G +V + + N L EE+MLL N A+ I
Sbjct: 700 KLRKRRFENGALRLSSPEVRFETDQEGDEITNVSVYETHETNELVEEYMLLTNVVVAQRI 759
Query: 739 ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDD--- 795
+++FP ALLRRHP PN + +++D SS+ Q +SLE+ +EK ++
Sbjct: 760 SKSFPSCALLRRHPIPNKEMFEPLLKIAAALSVEIDVSSNKQLSRSLEKIQEKFDEENDP 819
Query: 796 --YVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVH 853
LF I TR M A YF +G+ + ++ HY LA +YTHFTSP+RRY D++VH
Sbjct: 820 FKATLFRI---STTRCMTQALYFSAGEASQE-EYFHYGLASTIYTHFTSPIRRYADIIVH 875
Query: 854 RTLNAAL 860
R L+ ++
Sbjct: 876 RMLSGSI 882
Score = 39.7 bits (91), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 45/95 (47%), Gaps = 7/95 (7%)
Query: 144 NKDDNPSHQSEARCK--IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQ 201
N D+ Q + R + ++ +W+ + + AL + ++ N++N +E G
Sbjct: 270 NTADSSEEQEDDRKRKFLYDEYWNTQQIQNALNANRVVEGVFHANSYNCMEGKVLYSGKS 329
Query: 202 TD-----VLITGIAAQNRAVEGDFVLIKVDRLSLW 231
+L++GI NRA++GD V +++ +W
Sbjct: 330 QQQSAKTILVSGIKNINRAIDGDVVFVELLPEEMW 364
>gi|156382055|ref|XP_001632370.1| predicted protein [Nematostella vectensis]
gi|156219425|gb|EDO40307.1| predicted protein [Nematostella vectensis]
Length = 1048
Score = 277 bits (708), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 164/429 (38%), Positives = 235/429 (54%), Gaps = 17/429 (3%)
Query: 443 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP----CVP 498
RID W +S +P H + G G++E ++ ++ E+ + F+ L LP P
Sbjct: 395 RIDSWEVDSMYPSGHFVRALGLIGDLETEVATLMVEHTLSAPPFTDGQLKELPSDSPTEP 454
Query: 499 WEVPQEELLSRKDLR-NFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLP 557
W + +EE+ R+DLR + +F+IDP D+DD LSI +L DG +GVHIADV++FV P
Sbjct: 455 WVISEEEVCRRRDLRKSHLVFSIDPKGCEDVDDTLSIRQLKDGRLELGVHIADVTHFVHP 514
Query: 558 GTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR 617
G+ D EA+ RSTSVY+ R+ MLP +LS + SL GVDRLA S+ W L S DV+
Sbjct: 515 GSLTDAEARSRSTSVYLADRRYDMLPEILSANLCSLISGVDRLAMSVMWVLGSNYDVIKT 574
Query: 618 WIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYG------QFEWSDVVRSI 671
W GRT+IRS KL YE AQ I DG V + L + P+L G D+ S+
Sbjct: 575 WYGRTIIRSSYKLFYEVAQAIADG---VVPNEDLLKEIPELQGLDSSAANKGIQDIRWSV 631
Query: 672 KSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLAN 731
L ++++ K +R T GA+ L+N + L +E D + +++ EE M+LAN
Sbjct: 632 LKLMDIARYYKARRQTQGAVELDNPEVKVLLNEKKDILDLIDKQGLEIHETIEECMILAN 691
Query: 732 KTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREK 791
A+ + + FP +LLRRHP P + G + TSS+ +SL++ +
Sbjct: 692 HWVAKRLVQTFPTCSLLRRHPLPRQQYFENLMQCAKAKGFTIKTSSNKLLAESLDKCED- 750
Query: 792 LKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 851
DD +L A + M A YF +G D ++ HY LA YTHFTSP+RRY D++
Sbjct: 751 -PDDPTFNKLLRILAVQAMSSALYFSTGSVSVD-EFVHYGLALDRYTHFTSPIRRYADVI 808
Query: 852 VHRTLNAAL 860
VHR L AAL
Sbjct: 809 VHRLLMAAL 817
Score = 43.5 bits (101), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 11/82 (13%)
Query: 146 DDNPSHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHN-RLEAYCKIEGV---- 200
D N SH+ C + P ++ + ++ G K VN HN + EA+ + +
Sbjct: 215 DSNKSHKGHKECSEYLP---LDVLEAGIKSGRYIKGNLNVNKHNSQTEAFIQKRDISSGQ 271
Query: 201 ---QTDVLITGIAAQNRAVEGD 219
++DVLI G+A +NRAV GD
Sbjct: 272 GTSESDVLIYGVANRNRAVHGD 293
>gi|118403694|ref|NP_001072835.1| DIS3-like exonuclease 1 [Xenopus (Silurana) tropicalis]
gi|112418522|gb|AAI21936.1| DIS3-like exonuclease 1 [Xenopus (Silurana) tropicalis]
Length = 961
Score = 276 bits (707), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 188/518 (36%), Positives = 273/518 (52%), Gaps = 41/518 (7%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTGRVV I++R+ RD + F + +G K+A++ + + P
Sbjct: 246 PTGRVVGILQRN-WRDYVATF-PAKEDIETQG---KNAQR------------VLVMPWDY 288
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK I+ ++ +A + +V RID W S +P H + V GR G +
Sbjct: 289 RIPK-----------IRISTQQAEALQDYRVVV-RIDSWESTSLYPNGHFVRVLGRTGNL 336
Query: 469 EPQINAILYENAICCSGFSPESLSCLPC----VPWEVPQEELLSRKDLR-NFCIFTIDPS 523
E +I IL EN+I + FS L+ +P PW+V EE R DLR +F+IDP
Sbjct: 337 EAEIATILVENSISVNPFSEAQLAEMPSNTPESPWQVKPEEG-DRLDLRKTHLVFSIDPK 395
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
D+DDALSI +L G +GVHIADV++FV P T DIEA+ R+T+ Y+ R+ MLP
Sbjct: 396 GCEDVDDALSIRKLPSGHLELGVHIADVTHFVPPNTYTDIEARSRATTYYLADRRYDMLP 455
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR-WIGRTVIRSCCKLSYEHAQDIIDGK 642
++LS ++ SL GVDR A S+ W+++S+ + R W GRT+IRS KLSYE AQ ++DG
Sbjct: 456 LILSADLCSLLGGVDRYAVSVIWEMDSSTYEIRRVWYGRTIIRSSYKLSYEVAQQLMDG- 514
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
D+E NT E P ++ ++ L EV+ + +R GAL LE +
Sbjct: 515 -DLEPLNTEMELHPLKQDPVRLEQLLWAVGKLTEVAHATRMRRDMSGALELEGVEVRVQL 573
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
E + D V ++ E M+LAN A+ I +P ALLR HP +E
Sbjct: 574 GEKHSIDDLVPKQPLQMHETIAECMILANHWVAKKIWECYPQHALLRLHPPARQEFFQEL 633
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
+ G +DT S+ SL+QA + D ++ +L AT+ M A YF +G +
Sbjct: 634 KECAKARGFSIDTRSNKALADSLDQAND--PSDPLVNQLLRMMATQAMSNARYFSTGSYT 691
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
+D ++ HY LA YTHFTSP+RRY D+VVHR L AA+
Sbjct: 692 ED-EFYHYGLALEKYTHFTSPIRRYADIVVHRLLLAAV 728
Score = 46.2 bits (108), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 8/91 (8%)
Query: 154 EARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHN-RLEAYCKIEG-------VQTDVL 205
E K + H +E + ++ G + + VN H +LE + +++G +Q+D+L
Sbjct: 136 EGNGKEYPEHLPLEILEAGIKSGRYQQGVLSVNKHRAQLEGFVRLQGLGGKETDIQSDIL 195
Query: 206 ITGIAAQNRAVEGDFVLIKVDRLSLWAKMKG 236
I G +NRA+ GD V +++ S W G
Sbjct: 196 IYGTKPRNRAIHGDLVAVELLSRSEWKGRNG 226
>gi|195450236|ref|XP_002072425.1| GK22331 [Drosophila willistoni]
gi|194168510|gb|EDW83411.1| GK22331 [Drosophila willistoni]
Length = 981
Score = 276 bits (707), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 177/522 (33%), Positives = 262/522 (50%), Gaps = 59/522 (11%)
Query: 347 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 406
+ PTGR+V I+ R +W Y G + + D P
Sbjct: 346 RTPTGRIVGIVRR--------------KWRQYCGILQPSL--------IEDTNRHIFVPA 383
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 466
K P++ + + + +R + ID W S +P H + G G
Sbjct: 384 DRKIPRIRIETRQAAKLLNQR------------IIVTIDTWPRNSRYPHGHFVRSLGPLG 431
Query: 467 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 526
++ + IL E+ + FS E LS LP +PW + E+ R DLR+ I ++DP T
Sbjct: 432 DMATENEVILLEHDVPHCKFSEEVLSFLPQMPWTITPEDYAKRVDLRDLYICSVDPPGCT 491
Query: 527 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 586
D+DDAL L +G VGVHIADVS+F+ PG ALD EA R T+VY++ ++I M+P LL
Sbjct: 492 DIDDALHCRDLPNGNLEVGVHIADVSHFIRPGNALDKEAAARGTTVYLVGKRIDMVPELL 551
Query: 587 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 646
S + SL GV+R AFS W+++ +V+++ ++VI+S ++YE AQ +ID
Sbjct: 552 SSNLCSLVGGVERFAFSCIWEVDQEANVLNKRFHKSVIKSKRAMTYEEAQVMID------ 605
Query: 647 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EY 705
SN GE + +S+++L ++KILK +R +GAL L + + F D E
Sbjct: 606 DSNEQGE-------------IAKSLRNLNRLAKILKKRRMDNGALVLASPEIRFQVDSET 652
Query: 706 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAF 765
P + D N + EEFMLLAN T A+ IA F + A+LRRHP P
Sbjct: 653 HEPLEVEAKQMRDTNSMVEEFMLLANITVAQHIAAEFSECAVLRRHPRPPPTNFDPLVKA 712
Query: 766 CSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDD 824
G ++D S SL++ +K D F+ +I TR M A YF SG + +
Sbjct: 713 ARYQGFEVDIESGLSLSHSLDKC---VKVDNPYFNTMIRILTTRCMMQAVYFISGSLQKE 769
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
++ HY LA +YTHFTSP+RRY D++VHR L A++ A+ Y
Sbjct: 770 -EFFHYGLAASIYTHFTSPIRRYSDIMVHRLLAASIGADSTY 810
Score = 47.4 bits (111), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 65/135 (48%), Gaps = 9/135 (6%)
Query: 107 SGSTQSQLLLATDLCGS--------IISRSCPEPIANDSSCWAYTNKDDNPSHQSEARCK 158
SG + ++++L TD G+ I+ S E + + +K S ++E + +
Sbjct: 170 SGQSTTRVILLTDDAGNRSKAESEDILVASAAEYVKSLEDFPLLVDKLSQKSFENEKQAR 229
Query: 159 -IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVE 217
+ PH SM+ + E L + + ++ + N LE +E + +L+ G + NRAV+
Sbjct: 230 PQYPPHLSMKELLEGLRQKKYLQGSFQASRENYLEGNVNVENYEKGILLQGRESLNRAVD 289
Query: 218 GDFVLIKVDRLSLWA 232
GD V +++ + W+
Sbjct: 290 GDIVAVELLPETEWS 304
>gi|350578986|ref|XP_003121783.3| PREDICTED: DIS3-like exonuclease 1-like [Sus scrofa]
Length = 1016
Score = 276 bits (707), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 160/430 (37%), Positives = 241/430 (56%), Gaps = 9/430 (2%)
Query: 441 AARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV--- 497
RID W S +P H + V GR G++E +I IL EN+I FS + +P
Sbjct: 355 VVRIDSWESTSMYPNGHFVRVLGRIGDLEGEIATILVENSISVVPFSEAQMCEMPVNTPE 414
Query: 498 -PWEVPQEELLSRKDLR-NFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFV 555
PW+V EE RKDLR +F+IDP D+DD LS+ L +G +GVHIADV++FV
Sbjct: 415 NPWKVSSEEERKRKDLRKTHLVFSIDPRGCEDVDDTLSVRALDNGNLELGVHIADVTHFV 474
Query: 556 LPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLN-SAGDV 614
P + +DIEA+ R+T+ Y+ R+ MLP +LS +V SL GVDR A S+ W+L+ ++ ++
Sbjct: 475 APHSYIDIEARSRATTYYLADRRYDMLPSILSADVCSLLGGVDRYAVSVMWELDKTSHEI 534
Query: 615 VDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSL 674
+ W GRT+IRS KL YE AQ+++DG F + Q + ++V +I+ L
Sbjct: 535 KNVWYGRTIIRSAYKLFYEAAQELLDGNFSIVDDIPEFRDLDDKSRQAKLEELVWAIRKL 594
Query: 675 YEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTA 734
++++ ++ KR GAL LE + DE +D + +++ E M+LAN
Sbjct: 595 TDIARHIRAKRDLCGALELEGVEVRIQLDEKKNIHDLIPKQPLEVHETVAECMILANHWV 654
Query: 735 AEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 794
A+ I +FP ALLR+HP P+ E G +DT S+ SL+ A + +
Sbjct: 655 AKKIWESFPHQALLRQHPPPHQEFFSELRECAKAKGFFIDTRSNKTLADSLDNAND--PN 712
Query: 795 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 854
D ++ +L + AT+ M A YF +G ++ ++ HY LA YTHFTSP+RRY D++VHR
Sbjct: 713 DPIVNKLLRSMATQAMSNALYFSTGSCAEE-EFHHYGLALDKYTHFTSPIRRYSDIIVHR 771
Query: 855 TLNAALEAEK 864
L A+ +K
Sbjct: 772 LLMEAISKDK 781
Score = 48.1 bits (113), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 94 MPTMHINEEESA--ESGSTQSQLLLATDLCGSIISRSCPEPIANDSSCWAYT-NKDDNPS 150
MP + + E+E A + GS + + + S + P+ A C + ++ + +
Sbjct: 158 MPVVMVTEDEEAVQQYGSETEGVFVIS--FKSYLDNFWPDLKAAHELCESIVQSRREREN 215
Query: 151 HQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHN-RLEAYCKIEGVQT------- 202
E+ K + H +E + ++ G + + VN H ++EA+ +++G T
Sbjct: 216 ESQESHGKEYPEHLPLEVLEAGIKSGRYIQGILNVNKHRAQIEAFVRLQGASTKDSGLVS 275
Query: 203 DVLITGIAAQNRAVEGDFVLIKV 225
D+LI G+ A+NR++ GD V++++
Sbjct: 276 DILIHGMKARNRSIHGDVVVVEL 298
>gi|384486399|gb|EIE78579.1| hypothetical protein RO3G_03283 [Rhizopus delemar RA 99-880]
Length = 1260
Score = 276 bits (707), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 180/535 (33%), Positives = 280/535 (52%), Gaps = 53/535 (9%)
Query: 351 GRVVSIIERSPRR--DGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDRE-----YIQL 403
G VV+I+ER+ + G + + N K ++AKK +++ +
Sbjct: 496 GIVVAILERAQNQVFSGTLTLMRPNN----KRAQEEEAKKLLDGYDASNQQKEAPRIVWF 551
Query: 404 TPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG 463
+ + P + + ++ PD + +E L W S P + G
Sbjct: 552 KASDKRVPLIAIPIEQAPDDFVENSQE----YSKRLFVGTTKRWPITSLHPFGSLEEEIG 607
Query: 464 RGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLR-NFCIFTIDP 522
E+E Q AIL +N + S FS SCLP + ++ + SR+DLR N FTIDP
Sbjct: 608 SVYELETQTKAILADNNVTNSEFSEAVQSCLPPLSFDCGSDIDSSRRDLRDNTVTFTIDP 667
Query: 523 STATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPML 582
+ LDDALSI+++ G +GVH++DV+YF+ T LD EA+ R V ++ +PM+
Sbjct: 668 KGSNVLDDALSIKKVDKGTWEIGVHVSDVTYFIKSQTPLDKEARARGVRVDLVHSHVPMI 727
Query: 583 PVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVI----RSCCKLSYEHAQDI 638
P +L+E++ +L P R FS+ W ++S+G+V+D W G+T+I RS KL+Y+ AQDI
Sbjct: 728 PEVLTEQITNLVPNKSRFTFSVIWKIDSSGNVIDTWYGKTIISEPKRSSAKLTYDEAQDI 787
Query: 639 IDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKP 698
+D NTL + V ++IKSLY V+ IL +KR G +
Sbjct: 788 LD--------NTLSSD----------NQVTKNIKSLYHVATILHNKRKEKGV--FSQMRE 827
Query: 699 VFLFDEYGTPYDSVLS----GREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAP 754
F+ Y +V S ++ + + +EF+LLAN + A+ IA FPD ALLRRH P
Sbjct: 828 TLEFEVEDGDYQNVSSITAARKKSASIIVKEFLLLANTSVAQKIAMHFPDQALLRRHSPP 887
Query: 755 NMRKLREFEAFCSKH-GLQLDTSSSGQFHQSLEQARE-KLKDDYVLFDILINYATRPMQL 812
+ RK+ E + S + G+QLD++++ S+E +E KL+ L IL+ + +Q
Sbjct: 888 DPRKIHELCDYASNYLGVQLDSTNTSTLQHSIESIQEPKLRK---LVSILV---LKTLQT 941
Query: 813 ASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYW 867
YFC+G D + HYAL P++THFT+P RR+ D+VVHR L AAL AE+ ++
Sbjct: 942 PKYFCAGSV-DTAKFSHYALNAPLFTHFTAPSRRFADIVVHRQLEAALTAEEKHF 995
Score = 46.6 bits (109), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 145 KDDNPSHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDV 204
+DD HQ R +F H A+ + RVN NR +AY E + D+
Sbjct: 364 RDDANPHQ---RRPLFIAHLPFSALTPLFRARQLVQGTLRVNKRNRSDAYVFCEELDADI 420
Query: 205 LITGIAAQNRAVEGDFVLIKV 225
I G +NRA+EGD V +++
Sbjct: 421 YICGSRDRNRALEGDVVAVRL 441
>gi|255531532|ref|YP_003091904.1| ribonuclease R [Pedobacter heparinus DSM 2366]
gi|255344516|gb|ACU03842.1| ribonuclease R [Pedobacter heparinus DSM 2366]
Length = 709
Score = 276 bits (707), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 162/429 (37%), Positives = 228/429 (53%), Gaps = 34/429 (7%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 499
V I EW E P ++++ G GE ++NAIL + S F E +P
Sbjct: 187 VQVSITEWPEGVKNPIGKIINILGEQGENNTEMNAILAQYGFPLS-FPAEVELEANAIPE 245
Query: 500 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 559
+V E+ RKD RN FTIDP+ A D DDA+S + L +G +GVHIADVS++V P +
Sbjct: 246 QVSAAEIKGRKDFRNTTTFTIDPADAKDFDDAISFKTLENGNYEIGVHIADVSHYVKPNS 305
Query: 560 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 619
+LD EA R+TSVY++ R IPMLP LS V SL P D+L F+ ++L+ ++V+ W
Sbjct: 306 SLDKEAYARATSVYLVDRVIPMLPERLSNGVCSLRPNEDKLCFAAVFELDEKANLVNEWF 365
Query: 620 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 679
GRTVI S + SYE AQ++I+ K D I L E++
Sbjct: 366 GRTVIHSDRRFSYEEAQEVIENK---------------------AGDYAAEILKLNELAY 404
Query: 680 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 739
IL+DK+F +GA+ E+++ F DE G P + R+D + L E+FMLLANK AE IA
Sbjct: 405 ILRDKKFKNGAISFESTEVKFKLDETGKPIGVYVKERKDAHKLIEDFMLLANKKVAEFIA 464
Query: 740 RAFPD----SALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDD 795
+ + + R H +PN+ L F F ++ G +++ S + +SL E ++
Sbjct: 465 KKGKGKQKYTFVYRSHDSPNLENLGNFALFAARFGYKINMKSDKEIAKSLNYLMEDVEGK 524
Query: 796 YVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRT 855
++L A R M A Y HY LAF YTHFTSP+RRYPD++VHR
Sbjct: 525 KEQ-NVLTQLAIRSMAKAIYTTK-------KTSHYGLAFDHYTHFTSPIRRYPDVMVHRL 576
Query: 856 LNAALEAEK 864
L A L EK
Sbjct: 577 LAAYLNNEK 585
>gi|149641996|ref|XP_001514554.1| PREDICTED: exosome complex exonuclease RRP44 [Ornithorhynchus
anatinus]
Length = 966
Score = 276 bits (706), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 184/525 (35%), Positives = 267/525 (50%), Gaps = 69/525 (13%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 407
RP+GRVV II+R+ R G L S+ K+ R L TP
Sbjct: 348 RPSGRVVGIIKRNWR--PFCGML-----------SKSLIKEARRHL---------FTPAD 385
Query: 408 PKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 466
+ P++ R+E A T++ + + ID W S +P H + G G
Sbjct: 386 RRIPRI-------------RIETRQASTLDGQRIIVAIDGWPRNSRYPNGHFVKNLGTVG 432
Query: 467 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 526
+ E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ C+ ++DP T
Sbjct: 433 DKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCVCSVDPPGCT 492
Query: 527 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 586
D+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P LL
Sbjct: 493 DIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESAKRGTTVYLCEKRIDMVPELL 552
Query: 587 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 646
S + SL VDRLAFS W++N +++ ++ I S L+Y AQ ID
Sbjct: 553 SSNLCSLRSNVDRLAFSCIWEMNHNAEILKTRFTKSAINSKASLTYAEAQMRID------ 606
Query: 647 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EY 705
S ++ + D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 607 -SVSMRD------------DITTSLRGLNKLAKILKKQRIDKGALTLSSPEVRFHMDSET 653
Query: 706 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAF 765
P D ++ N + EEFMLLAN + AE I F + ALLR+HPAP
Sbjct: 654 HDPIDLQTKELKETNSMVEEFMLLANISVAEKIYEEFSEHALLRKHPAPPPSNYEILVKA 713
Query: 766 CSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLF----DILINYATRPMQLASYFCSGDF 821
L + T ++ +SL+ A +Y F +L ATR M A YFCSG
Sbjct: 714 AKSKDLDIKTDTAKALAESLDGA------EYPTFPYLNTLLRILATRCMMQAVYFCSG-- 765
Query: 822 KDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
D D+ HY LA P+YTHFTSP+RRY DL+VH AA+ A+ Y
Sbjct: 766 -MDNDFHHYGLASPIYTHFTSPIRRYVDLIVHWISVAAIGADSTY 809
>gi|121708269|ref|XP_001272079.1| exosome complex exonuclease exoribonuclease (Rrp44), putative
[Aspergillus clavatus NRRL 1]
gi|119400227|gb|EAW10653.1| exosome complex exonuclease exoribonuclease (Rrp44), putative
[Aspergillus clavatus NRRL 1]
Length = 1032
Score = 276 bits (706), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 222/725 (30%), Positives = 333/725 (45%), Gaps = 134/725 (18%)
Query: 155 ARCKIFAP-HWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQN 213
AR ++F P ++SM + L G + ++ V+ +N LE + +LI G N
Sbjct: 250 ARGELFYPEYYSMSKLMTGLRAGTLHQGVFNVSPYNYLEGSVNVAAFDKPLLILGRDNSN 309
Query: 214 RAVEGDFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEY 273
RA+ GD V+I++ LP + ++
Sbjct: 310 RAIAGDVVVIEI-----------------------LPKD-----------------QWKS 329
Query: 274 SNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNA 333
+ L+ E+ I +D+ +E + ERE + + +K
Sbjct: 330 PSTKLVDEETITRNDNPDAEENEAVVTERE--------RKALQEEVKKAHGK-------- 373
Query: 334 IERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSL 393
SS +PT +VV +I+R+ W Y G + +++S
Sbjct: 374 --------SSEGRPQPTAKVVGVIKRN--------------WRQYVGHVDSGSTGSQAS- 410
Query: 394 SVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPF 453
S ++ + + P + PK+ V + D + +R + ID W+ +S +
Sbjct: 411 SGRRQQNVFVLPMDKRIPKIRVRTRQAGDLLGQR------------ILVTIDAWDRDSRY 458
Query: 454 PQAHVLHVFG----RGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVP--QEE 505
P H + G +G E E A+L E + F L CLP W+VP +E+
Sbjct: 459 PTGHFIRSLGELETKGAETE----ALLLEYDVQYKPFPKAVLDCLPSEGHDWKVPASKED 514
Query: 506 LL--SRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDI 563
+ R+DLR+ I +IDP D+DDAL L +G VGVHIADVS+FV P A+D+
Sbjct: 515 IGWNGRRDLRDLLICSIDPPGCQDIDDALHARPLPNGNFEVGVHIADVSHFVKPNNAMDL 574
Query: 564 EAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTV 623
EA VR T+VY++ ++I MLP LL ++ SL P V+R AFS+ W++ +VV ++V
Sbjct: 575 EASVRGTTVYLVDKRIDMLPHLLGTDLCSLKPYVERYAFSVLWEMTPNAEVVSANFTKSV 634
Query: 624 IRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKD 683
IRS SYE AQ ID D ++ L E S+++L +SKIL+
Sbjct: 635 IRSREAFSYEQAQKRID---DPSKNDELTE----------------SMRTLLRLSKILRQ 675
Query: 684 KRFTDGALRLENSKPVFLF--DEYGTPYDSVLS-GREDLNFLFEEFMLLANKTAAEVIAR 740
KR GAL L + + DE G P V + N L EEFML AN T A I
Sbjct: 676 KRMDAGALNLASPEVRIETDNDEVGDPLTDVKTKALLATNSLVEEFMLHANITVAAKIYD 735
Query: 741 AFPDSALLRRHPAPNMRKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLF 799
+F +ALLRRH P + E K L+LD SSS SL++ + + F
Sbjct: 736 SFSQTALLRRHATPPPQNFEELINQLSKKRNLELDVSSSRALADSLDRC---VDAENPFF 792
Query: 800 DILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNA 858
+ L+ ATR M A YFC+G ++++ HY LA P+YTHFTSP+RRY DL+VHR L +
Sbjct: 793 NTLVRILATRCMTSAEYFCAGAHA-ESEFRHYGLASPIYTHFTSPIRRYADLLVHRQLAS 851
Query: 859 ALEAE 863
A+ E
Sbjct: 852 AIGYE 856
>gi|166201907|sp|Q0P4R5.2|DI3L1_XENTR RecName: Full=DIS3-like exonuclease 1
Length = 1039
Score = 276 bits (706), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 188/518 (36%), Positives = 273/518 (52%), Gaps = 41/518 (7%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTGRVV I++R+ RD + F + +G K+A++ + + P
Sbjct: 324 PTGRVVGILQRN-WRDYVATF-PAKEDIETQG---KNAQR------------VLVMPWDY 366
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK I+ ++ +A + +V RID W S +P H + V GR G +
Sbjct: 367 RIPK-----------IRISTQQAEALQDYRVVV-RIDSWESTSLYPNGHFVRVLGRTGNL 414
Query: 469 EPQINAILYENAICCSGFSPESLSCLPC----VPWEVPQEELLSRKDLR-NFCIFTIDPS 523
E +I IL EN+I + FS L+ +P PW+V EE R DLR +F+IDP
Sbjct: 415 EAEIATILVENSISVNPFSEAQLAEMPSNTPESPWQVKPEEG-DRLDLRKTHLVFSIDPK 473
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
D+DDALSI +L G +GVHIADV++FV P T DIEA+ R+T+ Y+ R+ MLP
Sbjct: 474 GCEDVDDALSIRKLPSGHLELGVHIADVTHFVPPNTYTDIEARSRATTYYLADRRYDMLP 533
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR-WIGRTVIRSCCKLSYEHAQDIIDGK 642
++LS ++ SL GVDR A S+ W+++S+ + R W GRT+IRS KLSYE AQ ++DG
Sbjct: 534 LILSADLCSLLGGVDRYAVSVIWEMDSSTYEIRRVWYGRTIIRSSYKLSYEVAQQLMDG- 592
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
D+E NT E P ++ ++ L EV+ + +R GAL LE +
Sbjct: 593 -DLEPLNTEMELHPLKQDPVRLEQLLWAVGKLTEVAHATRMRRDMSGALELEGVEVRVQL 651
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
E + D V ++ E M+LAN A+ I +P ALLR HP +E
Sbjct: 652 GEKHSIDDLVPKQPLQMHETIAECMILANHWVAKKIWECYPQHALLRLHPPARQEFFQEL 711
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
+ G +DT S+ SL+QA + D ++ +L AT+ M A YF +G +
Sbjct: 712 KECAKARGFSIDTRSNKALADSLDQAND--PSDPLVNQLLRMMATQAMSNARYFSTGSYT 769
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
+D ++ HY LA YTHFTSP+RRY D+VVHR L AA+
Sbjct: 770 ED-EFYHYGLALEKYTHFTSPIRRYADIVVHRLLLAAV 806
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 8/91 (8%)
Query: 154 EARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHN-RLEAYCKIEG-------VQTDVL 205
E K + H +E + ++ G + + VN H +LE + +++G +Q+D+L
Sbjct: 214 EGNGKEYPEHLPLEILEAGIKSGRYQQGVLSVNKHRAQLEGFVRLQGLGGKETDIQSDIL 273
Query: 206 ITGIAAQNRAVEGDFVLIKVDRLSLWAKMKG 236
I G +NRA+ GD V +++ S W G
Sbjct: 274 IYGTKPRNRAIHGDLVAVELLSRSEWKGRNG 304
>gi|378725337|gb|EHY51796.1| hypothetical protein HMPREF1120_00023 [Exophiala dermatitidis
NIH/UT8656]
Length = 1006
Score = 276 bits (705), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 214/719 (29%), Positives = 324/719 (45%), Gaps = 131/719 (18%)
Query: 158 KIFAP-HWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAV 216
++F P ++SM + ++ G + ++ V+ +N LE K+ +L+ G A NR++
Sbjct: 247 ELFYPEYYSMSRMMTGIKAGTLHQGVFNVSPYNYLEGTVKVPAFDKPLLVLGREASNRSI 306
Query: 217 EGDFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNC 276
GD V+++V LP + ++ +
Sbjct: 307 SGDVVVVEV-----------------------LPKD-----------------QWKAPST 326
Query: 277 TLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIER 336
+L E ++ +D+ SE + E V + + + R
Sbjct: 327 QILDEDTLNQNDNPDSE-----------------------EQEESVVTETERRALQEEVR 363
Query: 337 LSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVP 396
+ + +PT RVV I++R+ R+ +VG ++ GG+R+
Sbjct: 364 RAHSAGAENRAQPTCRVVGIMKRNWRQ--LVG--TIDPISGTSGGNRQTT---------- 409
Query: 397 DREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQA 456
+ L P + PK+ + + + + + KR + A ID W+ ++ +P
Sbjct: 410 ----VFLVPMDKRIPKIRIQTRQVAELVGKR------------IVATIDSWDRDTRYPVG 453
Query: 457 HVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVP--WEVPQEE----LLSRK 510
H + G E + A+L E + F L CLP W+VP E RK
Sbjct: 454 HYIRSLGELETKEAETEALLLEYDVQYRPFPKTVLDCLPSEGHNWKVPTESSDPGWKGRK 513
Query: 511 DLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRST 570
DLRN + +IDP D+DDAL L +G VGVHIADVS+FV P A+D EA R T
Sbjct: 514 DLRNLLVCSIDPPGCQDIDDALHARPLPNGNFEVGVHIADVSHFVKPNNAMDAEASSRGT 573
Query: 571 SVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKL 630
+VY++ ++I MLP LL ++ SL P V+R AFS W++ DVV ++VI S
Sbjct: 574 TVYLVDKRIDMLPPLLGTDLCSLKPYVERYAFSTLWEITPDADVVSASFTKSVILSREGF 633
Query: 631 SYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGA 690
SYE AQ ID D +++ L +G +++L +S+ L+ KR GA
Sbjct: 634 SYEQAQKRID---DPTATDELTQG----------------MRTLLSLSQKLRQKRMDAGA 674
Query: 691 LRLENSKPVFLFDEYGTPYDSVLSGRED----LNFLFEEFMLLANKTAAEVIARAFPDSA 746
L L S P + DS+ + N L EEFMLLAN T A+ I FP +A
Sbjct: 675 LNL--SSPEVRIEADSESSDSLADVKTKAHLATNSLVEEFMLLANITVAKKIQSVFPQTA 732
Query: 747 LLRRHPAPNMRKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN- 804
LLRRH P + E G LD SSS SL++ + ++ F+ LI
Sbjct: 733 LLRRHATPPASNFADLSEQLKRMRGFDLDVSSSKALADSLDRC---VDPNHPFFNTLIRI 789
Query: 805 YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE 863
ATR M A YFCSG + ++ HY LA +YTHFTSP+RRY DL+VHR L A+ E
Sbjct: 790 MATRCMTSAEYFCSGSHA-EPEYRHYGLASEIYTHFTSPIRRYADLLVHRQLAYAIGYE 847
>gi|307199462|gb|EFN80075.1| Exosome complex exonuclease RRP44 [Harpegnathos saltator]
Length = 977
Score = 276 bits (705), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 196/608 (32%), Positives = 303/608 (49%), Gaps = 88/608 (14%)
Query: 335 ERLSAMISSYPTKR--PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSS 392
E+ A S+ TK PTG++V II R +W Y G + A K
Sbjct: 318 EKTFAKYSASKTKERIPTGKIVGIIRR--------------KWRQYCGILQPSAIK---- 359
Query: 393 LSVPDREYIQ--LTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATI-EMELVAARIDEWNE 449
E ++ P K PK+ R+E A I + + +D W
Sbjct: 360 ------ESVRHLFVPAERKIPKI-------------RIETRQAEILSKQRIIVALDSWPR 400
Query: 450 ESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSR 509
S +P H + G G+ E + +L E+ + S FS LS LP +PW + + ++ R
Sbjct: 401 HSRYPLGHFVRALGNIGDKETENEVLLLEHDVPHSRFSDAVLSFLPKLPWIITEADIAQR 460
Query: 510 KDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRS 569
+DLR+ I ++DP TD+DDAL ++L +G VGVHIADVS+F+ PGTALD EA +R+
Sbjct: 461 EDLRHLDICSVDPPGCTDIDDALHCKKLPNGNYNVGVHIADVSHFIRPGTALDKEAALRA 520
Query: 570 TSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCK 629
T+VY++ ++I M+P LLS + SL +R AFS W++N +++ +++IRS
Sbjct: 521 TTVYLVDKRIDMVPELLSSNLCSLRGNEERFAFSCIWEINPHANIISTRFCKSIIRSRQA 580
Query: 630 LSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDG 689
++YE AQ ID ++ + S++ L +++K K +R +G
Sbjct: 581 MTYEEAQLKIDDATQHDA-------------------ITVSLRGLNKLAKKFKKRRIQNG 621
Query: 690 ALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALL 748
AL L + + F D E P D + + N + EEFMLLAN + AE I FP+ A+L
Sbjct: 622 ALILASPEIRFQVDSETHDPIDVEVKKLRETNSMVEEFMLLANISVAEKILAEFPECAML 681
Query: 749 RRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YAT 807
RRHP P L G ++ ++ + QSL++A+ K+ + Y F+ ++ AT
Sbjct: 682 RRHPTPPQNNLEPLIKAARNQGFTINVNTGKELAQSLDEAK-KVSNPY--FNTMLRILAT 738
Query: 808 RPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRR-YPDLVVHRTLNAALEAEKLY 866
R M A YF SG + + ++ HY LA P+YTHFTSP+RR Y D++VHR L+ + A+ Y
Sbjct: 739 RCMMQAVYFISGMHQSE-EYSHYGLACPIYTHFTSPIRRQYADIIVHRLLSVCIGADATY 797
Query: 867 -----WKHRRMLPKN-NHREGVRG-------RFLTGIFYDKDAAESLEG------REALS 907
K +L +N N+R + T +F+ +D + EG + AL
Sbjct: 798 PELLDKKKNNLLCQNLNYRNRMAQYASRASVALHTHLFF-RDKVQDEEGYILFVRKNALQ 856
Query: 908 VAALKYGV 915
V KYG+
Sbjct: 857 VLIPKYGI 864
>gi|307184419|gb|EFN70828.1| DIS3-like exonuclease 2 [Camponotus floridanus]
Length = 598
Score = 276 bits (705), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 162/439 (36%), Positives = 245/439 (55%), Gaps = 29/439 (6%)
Query: 444 IDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQ 503
ID W E + +L V G+ GE+E ++ AI+ E+ + + E L LP + +
Sbjct: 38 IDSW--EQIYASGRILSVVGKVGEIEAELQAIILEHNLDVLPYREELLEELPGSDYILTD 95
Query: 504 EELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDI 563
+++ R+D R+ C+FTIDP+TA DLDDA+S + L +G VGVHI+DV++++ + LD+
Sbjct: 96 DDMKDREDWRHECVFTIDPATAIDLDDAISCKVLDNGNYEVGVHISDVTHYLKFSSPLDM 155
Query: 564 EAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTV 623
E R+TS+Y+ MLP L ++ SL+ G DRLAFS+ W++ S ++V +T+
Sbjct: 156 EVSKRATSIYLPHTTYHMLPEKLC-QICSLSAGKDRLAFSVIWEMTSDAEIVKHHFAKTI 214
Query: 624 IRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKD 683
IRSCC+LSY+ AQ +I+ + N+L + G + S + + +L+++S L++
Sbjct: 215 IRSCCQLSYDMAQAMIENPEKTQFQNSLN-----IKGNYTVSSLSNVVNNLFKLSNQLRN 269
Query: 684 KRFTDGALRLENSKPVFLFD-----EYG--TPYDSVLSGREDLNFLFEEFMLLANKTAAE 736
KRF +GALRL+ K D E G P + L R+D N L EEFMLLAN T A
Sbjct: 270 KRFDNGALRLDQPKLQICTDTTLSQEQGIPIPVNYHLEERKDSNSLVEEFMLLANVTVAT 329
Query: 737 VIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDY 796
+ A P+ ALLR H P+ L K+G+ L+ G+ +SL+ + +Y
Sbjct: 330 KLYTAIPEMALLRIHKDPSKYSLNTVCDTLRKYGIHLN----GETAKSLQASIRHYDPEY 385
Query: 797 ----------VLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRR 846
+ ++IN ++ M A Y CS D HYAL P+YTHFTSP+RR
Sbjct: 386 NAISVNNSMKYIMTVIINLCSKTMMRAEYICSSTISSLQDLRHYALNVPLYTHFTSPIRR 445
Query: 847 YPDLVVHRTLNAALEAEKL 865
Y D VVHR L+AA+E + L
Sbjct: 446 YSDCVVHRLLHAAIENKSL 464
>gi|149278034|ref|ZP_01884173.1| exoribonuclease II [Pedobacter sp. BAL39]
gi|149231232|gb|EDM36612.1| exoribonuclease II [Pedobacter sp. BAL39]
Length = 709
Score = 275 bits (704), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 159/429 (37%), Positives = 229/429 (53%), Gaps = 34/429 (7%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 499
V +I +W E P V+ + G GE ++NAIL + F PE +P
Sbjct: 187 VQVKITDWPEGVKNPIGTVITILGEQGENNTEMNAILAQYGFPLQ-FPPEVEKEANAIPE 245
Query: 500 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 559
++ +E+ R+D R FTIDP+ A D DDA+S ++L +G VGVHIADV+++V P +
Sbjct: 246 QITADEIKDRRDFRETVTFTIDPADAKDFDDAISFKKLDNGHYEVGVHIADVAHYVTPNS 305
Query: 560 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 619
ALD EA R+TSVY++ R IPMLP LS V SL P D+L F+ ++L++ ++++ W
Sbjct: 306 ALDKEAYGRATSVYLVDRVIPMLPERLSNGVCSLRPHEDKLCFAAVFELDNKANIINEWF 365
Query: 620 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 679
GRTVI S + SYE AQ++I+ K D I L E++
Sbjct: 366 GRTVIHSDRRFSYEEAQEVIENK---------------------TGDFSEEILKLNELAY 404
Query: 680 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 739
IL+DK+F +GA+ E+++ F DE G P + R+D + L E+FMLLANK AE IA
Sbjct: 405 ILRDKKFKNGAISFESTEVKFKLDEDGKPLGVYVKERKDAHKLIEDFMLLANKKVAEFIA 464
Query: 740 RAFPD----SALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDD 795
+ + + R H +PN+ L F F ++ G +++ S +SL E ++
Sbjct: 465 KKGKGKQKYTFIYRSHDSPNLENLGNFALFAARFGYKINMKSDKDIAKSLNYLMEDVEGK 524
Query: 796 YVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRT 855
++L A R M A Y HY LAF YTHFTSP+RRYPD++VHR
Sbjct: 525 KEQ-NVLTQLAIRSMAKAVYTTK-------KTSHYGLAFDHYTHFTSPIRRYPDVMVHRL 576
Query: 856 LNAALEAEK 864
L A L EK
Sbjct: 577 LAAYLNKEK 585
>gi|195125019|ref|XP_002006980.1| GI12678 [Drosophila mojavensis]
gi|193918589|gb|EDW17456.1| GI12678 [Drosophila mojavensis]
Length = 1220
Score = 275 bits (704), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 156/420 (37%), Positives = 234/420 (55%), Gaps = 32/420 (7%)
Query: 456 AHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWE-------------VP 502
A ++ GR G+++ ++ AIL+ N S VP+E V
Sbjct: 604 AELVQPLGRVGDLDSELKAILFHN------------SLRDIVPYEERFNEMYAEAAPAVT 651
Query: 503 QEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALD 562
++L++R+D+R C+FTIDP TA DLDDA+SIE++S+ VGVHI+DVS+++ + LD
Sbjct: 652 ADDLVNRRDMRKSCVFTIDPLTARDLDDAISIEKISENEYEVGVHISDVSHYLQENSELD 711
Query: 563 IEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR-WIGR 621
+ RSTS+Y+ I MLP L SL PG D+ +FS+FW ++ G + + R
Sbjct: 712 NIVKQRSTSIYLANEVIHMLPKTLCFRC-SLLPGEDKYSFSVFWRMDGQGKQLGKPAFTR 770
Query: 622 TVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKIL 681
+VI SC + +YEHAQ IID + + + +P + F +D+V+ + L+ ++ +
Sbjct: 771 SVINSCSQFAYEHAQKIIDNPREPFTE----DDFPNILNGFTVNDIVQRVTWLHGIASNM 826
Query: 682 KDKRFTDGALRLENSKPVFLFDEY-GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR 740
+ KRF +GAL + N+K F D G P + + N + EEFMLLAN+ A+ I
Sbjct: 827 RTKRFDNGALTINNAKVRFTLDPLEGEPIGFEIEQLREANHMIEEFMLLANQAVAKFIHD 886
Query: 741 AFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFD 800
AFP A+LR HP P + L+ HGL+LD SSS S+ + ++ D +
Sbjct: 887 AFPKIAVLRNHPPPLTKSLKTLRDKLYAHGLELDYSSSKALQASMRKICQEAADPVAMSA 946
Query: 801 ILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
L +PM A+Y CS + +D HYAL+ P+YTHFTSP+RRYPD++VHR L A L
Sbjct: 947 CLSQLLMKPMARATYICSDGKTEPSDLWHYALSIPIYTHFTSPIRRYPDVMVHRLLAAGL 1006
>gi|50289115|ref|XP_446987.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526296|emb|CAG59920.1| unnamed protein product [Candida glabrata]
Length = 1007
Score = 275 bits (704), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 233/750 (31%), Positives = 349/750 (46%), Gaps = 134/750 (17%)
Query: 160 FAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEGD 219
+ +++ + L+ G F+ +++ +N LE + VLI G NRA GD
Sbjct: 261 YPEYYTNARIMGGLKNGVLFQGSIQISEYNFLEGTISLPRFSKPVLIRGQKNLNRAFNGD 320
Query: 220 FVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCTLL 279
V++++ S W S+I DS H D+
Sbjct: 321 QVIVELLPQSEWKA------PSTITLDSE--------HFDV------------------- 347
Query: 280 SEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSA 339
+D++ + ++E + +G N V S + + A + ++A
Sbjct: 348 --------NDNADDGNDEESGDVKGAN-------------SAVIMSDKQRRLLAKDAIAA 386
Query: 340 MISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDRE 399
S + PTGRVV I+ RS R+ VG + N GG+
Sbjct: 387 QQSKKVS--PTGRVVGIVRRSWRQ--YVGQIAPNSVDLQNGGT----------------- 425
Query: 400 YIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVL 459
+Y ++++ K LP I+ R ++ +V + ID W E +P H +
Sbjct: 426 ---------QYVFVILMDKCLP-KIRIRTRRAKELLDKRIVVS-IDSWPETHRYPLGHFV 474
Query: 460 HVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEE-----------L 506
G V+ + A+L E+ + FS + L CLP W+ P++ L
Sbjct: 475 RDLGGIETVQAETEALLLEHDVEYRPFSKKVLDCLPSEGHDWKAPEKLSDSAAIAKDPLL 534
Query: 507 LSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQ 566
R+DLR+ I +IDP D+DDAL + L +G VGVHIADV++FV PGTALD E
Sbjct: 535 PKRRDLRDKLICSIDPPNCVDIDDALHAKMLENGNWEVGVHIADVTHFVKPGTALDAEGA 594
Query: 567 VRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRS 626
R TSVY++ ++I MLP+LL ++ SL P VDR AFS+ W+L+ ++V+ ++VIRS
Sbjct: 595 SRGTSVYLVDKRIDMLPMLLGTDLCSLKPYVDRFAFSVLWELDQDANIVNVDFTKSVIRS 654
Query: 627 CCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRF 686
SYE AQ ID D ++ L +G +++L ++SK LK KR
Sbjct: 655 REAFSYEQAQIRID---DPNQTDELTQG----------------MRALLQLSKKLKQKRL 695
Query: 687 TDGALRLENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDS 745
GAL L + + V + E P + + N L EEFMLLAN + A I +FP +
Sbjct: 696 DAGALNLASPEVKVHMDSETSDPNEVEIKKLLATNSLVEEFMLLANISVARKIYDSFPQT 755
Query: 746 ALLRRHPAP---NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDIL 802
A+LRRH AP N L E +K GL + SS SL++ +K D Y F+ L
Sbjct: 756 AMLRRHAAPPSTNFEILNEM--LQTKKGLTISLESSKALADSLDRCVDK-NDPY--FNTL 810
Query: 803 IN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 861
+ +TR M A YF SG + +D+ HY LA +YTHFTSP+RRY D+V HR L AA+
Sbjct: 811 VRIMSTRCMMAAQYFYSGAYS-YSDFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAAAIG 869
Query: 862 AEKLYWKHR-----RMLPKNNHREGVRGRF 886
E L HR M+ KN +R+ +F
Sbjct: 870 YEPLSLTHRDKTKMDMICKNINRKHRNAQF 899
>gi|255947612|ref|XP_002564573.1| Pc22g05390 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591590|emb|CAP97827.1| Pc22g05390 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1031
Score = 275 bits (703), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 219/738 (29%), Positives = 338/738 (45%), Gaps = 140/738 (18%)
Query: 144 NKDDNPSHQSEARCKIFAP-HWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQT 202
+KD S ++ R ++F P ++SM + L G + ++ V+ +N LEA K
Sbjct: 241 SKDARDSKET-TRGELFYPEYFSMSKLTTGLRAGTLHQGVFNVSPYNYLEASVKTAAFDK 299
Query: 203 DVLITGIAAQNRAVEGDFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICK 262
+LI G N + + +S +VE LP +
Sbjct: 300 PLLILGRDNSN---------------------RAIAGDSVVVE--VLPQD---------- 326
Query: 263 GKSKVDVSYEYSNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKV 322
++ + ++ E+ + +D+ +E TE V
Sbjct: 327 -------QWKSPSTKIVDEEAVTRNDNPDTE------------------------ETEAV 355
Query: 323 SSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGS 382
+ ++ + + + + +PT +VV +I+RS R+ VG ++ N + G
Sbjct: 356 VTDRERKALQEEVKKAHGKHAEGRPQPTAKVVGVIKRSWRQ--YVGHVDTNSTGSQASGR 413
Query: 383 RKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAA 442
R+ + + L P + PK+ V + D + +R+ LV
Sbjct: 414 RQ--------------QNVFLLPMDKRIPKIRVRTRQASDILGQRI----------LVT- 448
Query: 443 RIDEWNEESPFPQAHVLHVFG----RGGEVEPQINAILYENAICCSGFSPESLSCLPCV- 497
ID W+ +S +P H + G +G E E A+L E + F L CLP
Sbjct: 449 -IDSWDRDSRYPTGHFIRALGELETKGAETE----ALLLEYDVQYKPFPKSVLDCLPSEG 503
Query: 498 -PWEVP----QEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVS 552
W+VP + RKDLR+ I +IDP D+DDAL L +G VGVHIADVS
Sbjct: 504 HDWKVPVSKEDKGWNGRKDLRDLLICSIDPPGCQDIDDALHARVLPNGNYEVGVHIADVS 563
Query: 553 YFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAG 612
+FV P +D+EA VR T+VY++ ++I MLP LL ++ SL P V+R AFS+ W++
Sbjct: 564 HFVKPNNPMDLEASVRGTTVYLVDKRIDMLPHLLGTDLCSLKPYVERYAFSVLWEMTPDA 623
Query: 613 DVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIK 672
++V ++VIRS SYE AQ ID K + ++ S++
Sbjct: 624 EIVSSNFTKSVIRSREAFSYEQAQLRIDDK-------------------SQQDELTESMR 664
Query: 673 SLYEVSKILKDKRFTDGALRLENSKPVFLF----DEYGTPYDSVLS-GREDLNFLFEEFM 727
+L + SK+L+ KR GAL L + P DE G P V + D N L EEFM
Sbjct: 665 ALLKFSKVLRQKRMDAGALNL--ASPEVRIESEGDEVGDPLTDVKTKAMLDTNSLVEEFM 722
Query: 728 LLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFE-AFCSKHGLQLDTSSSGQFHQSLE 786
LLAN T I +F +ALLRRH P + + + K ++LD SSS +SL+
Sbjct: 723 LLANITVGSKIYESFSQTALLRRHATPPPQNFEDLQNQLLKKRNMELDVSSSRALAESLD 782
Query: 787 QAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLR 845
+ + + F+ L+ ATR M A YFC+G F ++++ HY LA P+YTHFTSP+R
Sbjct: 783 RC---VDPNNPFFNTLVRILATRCMTSAEYFCAGAFT-ESEFRHYGLASPIYTHFTSPIR 838
Query: 846 RYPDLVVHRTLNAALEAE 863
RY DL+VHR L +A+ E
Sbjct: 839 RYADLMVHRQLASAIGYE 856
>gi|115389566|ref|XP_001212288.1| mitotic control protein dis3 [Aspergillus terreus NIH2624]
gi|114194684|gb|EAU36384.1| mitotic control protein dis3 [Aspergillus terreus NIH2624]
Length = 1034
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 214/725 (29%), Positives = 327/725 (45%), Gaps = 134/725 (18%)
Query: 155 ARCKIFAP-HWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQN 213
AR ++F P +++M + L G + ++ V+ +N LE + ++I G N
Sbjct: 250 ARGELFYPEYYTMSKIMTGLRAGTLHQGVFNVSPYNYLEGSVSVAAFDKPLIILGRENSN 309
Query: 214 RAVEGDFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEY 273
RA+ GD V+I+V LP + ++
Sbjct: 310 RAISGDVVVIEV-----------------------LPKD-----------------QWKA 329
Query: 274 SNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNA 333
+ ++ E+ + +D+ SE TE V + ++ +
Sbjct: 330 PSTKIVEEEAVTKNDNPESE------------------------DTETVVTERERKALQE 365
Query: 334 IERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSL 393
+ + +S +PT +VV +++R+ W Y G + + +
Sbjct: 366 EVKKAHGKNSEGKPQPTAKVVGVVKRN--------------WRQYVGHVDSGSTGAQGT- 410
Query: 394 SVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPF 453
S ++ + + P + PK+ V + D + +R + ID W+ +S +
Sbjct: 411 SGRRQQTVFVLPMDKRVPKIRVRTRQAADLLGQR------------ILVTIDAWDRDSRY 458
Query: 454 PQAHVLHVFG----RGGEVEPQINAILYENAICCSGFSPESLSCLP--CVPWEVPQEE-- 505
P H + G +G E E A+L E + F L CLP W VP +
Sbjct: 459 PTGHFIRSLGELETKGAETE----ALLLEYDVQYKPFPKAVLDCLPPEGHDWRVPASKDN 514
Query: 506 --LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDI 563
R+DLR+ I +IDP D+DDAL L +G VGVHIADVS+FV P A+D+
Sbjct: 515 VGWKGRRDLRDLLICSIDPPGCQDIDDALHARPLPNGNFEVGVHIADVSHFVKPNNAMDL 574
Query: 564 EAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTV 623
EA +R T+VY++ ++I MLP LL ++ SL P V+R AFS+ W++ +VV ++V
Sbjct: 575 EASLRGTTVYLVDKRIDMLPHLLGTDLCSLKPYVERYAFSVLWEMTPNAEVVSADFTKSV 634
Query: 624 IRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKD 683
IRS SYE AQ ID D + L E S+++L SKIL+
Sbjct: 635 IRSREAFSYEQAQKRID---DPSQKDELTE----------------SMRTLLRFSKILRQ 675
Query: 684 KRFTDGALRLENSKPVFLF--DEYGTPYDSVLS-GREDLNFLFEEFMLLANKTAAEVIAR 740
KR GAL L + + DE G P V + + N L EEFML AN T A I
Sbjct: 676 KRMDAGALNLASPEVRIEADNDEVGDPLTDVKTKAMLETNSLVEEFMLHANITVASKIYS 735
Query: 741 AFPDSALLRRHPAPNMRKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLF 799
F +ALLRRH P + E K ++LD SSSG SL++ ++ F
Sbjct: 736 TFSQTALLRRHATPPPQNFEELTNQLSKKRNMRLDVSSSGALADSLDRCVDEANP---FF 792
Query: 800 DILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNA 858
+ L+ ATR M A YFC+G ++++ HY LA P+YTHFTSP+RRY DL+VHR L +
Sbjct: 793 NTLVRILATRCMTSAEYFCAG-AHGESEFRHYGLASPIYTHFTSPIRRYADLLVHRQLAS 851
Query: 859 ALEAE 863
A+ E
Sbjct: 852 AIGYE 856
>gi|324503794|gb|ADY41642.1| Exosome complex exonuclease RRP44, partial [Ascaris suum]
Length = 944
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 168/428 (39%), Positives = 230/428 (53%), Gaps = 25/428 (5%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 499
V ID W S +P H + G G+ + + +L E+ I FS L CLP +PW
Sbjct: 405 VLVAIDSWPRNSRYPIGHYVRTLGAVGDRDTENEVLLLEHDIPHDPFSEAVLKCLPTMPW 464
Query: 500 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 559
P+E RKDLR+ I ++DP D+DDAL ++S + VGVHIADV++FV PGT
Sbjct: 465 IPPEES--HRKDLRSLVICSVDPPGCVDIDDALHCRQISPDLFEVGVHIADVTHFVRPGT 522
Query: 560 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 619
A+D EA R T+VY+ +R+I MLP LLS + SL DR AFS+ W +N+ D+++
Sbjct: 523 AMDAEAADRGTTVYLCERRIDMLPDLLSSNLCSLRENEDRFAFSVMWHMNADADILEVKF 582
Query: 620 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 679
+++IRS L+YE AQ ID ES N V S++ L +SK
Sbjct: 583 HKSIIRSSGALTYEMAQKRIDD----ESMN---------------DAVTLSLRGLMMLSK 623
Query: 680 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGRE-DLNFLFEEFMLLANKTAAEVI 738
LK KR GAL L +S+ F D SV + D N + EEFMLLAN + AE I
Sbjct: 624 RLKAKRMAKGALTLASSEIRFNIDSETMDPISVQEKKPLDTNSMVEEFMLLANISVAERI 683
Query: 739 ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVL 798
+PD ALLRRHP P + G ++ SS QSL+ A + ++ +L
Sbjct: 684 TTEYPDCALLRRHPVPAAESYKPVIEAARARGFVMNVSSGKALAQSLDNAVD--VNNPML 741
Query: 799 FDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNA 858
+L TR M A YF SG + + H+ LA P+YTHFTSP+RRY D++VHR L A
Sbjct: 742 NTMLRMMTTRCMTQAVYFSSGSLPME-QYVHFGLAAPIYTHFTSPIRRYADVMVHRLLAA 800
Query: 859 ALEAEKLY 866
A+ A+ +
Sbjct: 801 AIGADSTF 808
>gi|432904524|ref|XP_004077374.1| PREDICTED: exosome complex exonuclease RRP44-like [Oryzias latipes]
Length = 941
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 178/507 (35%), Positives = 259/507 (51%), Gaps = 63/507 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 407
+PTG++V II+R+ R G LNV+Q K +R TP
Sbjct: 333 KPTGKIVGIIKRNWR--PFCGMLNVSQ---IKESTRH-----------------LFTPAD 370
Query: 408 PKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 466
+ P++ R+E A T+ + + ID W + S +P H + G G
Sbjct: 371 RRIPRI-------------RIETRQASTLVGQRIMVAIDGWPKNSRYPNGHFVRSLGSAG 417
Query: 467 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 526
E + +L E+ + FS LS LP +PW + E+++ R+DLR+ + ++DP T
Sbjct: 418 EKGTEEAVLLLEHDVPHQAFSQNVLSFLPKMPWGITPEDMVKRQDLRHLTVCSVDPPGCT 477
Query: 527 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 586
D+DDAL L +G VGVHIADVS+F+ PG ALD EA R T+VY+ ++I M+P LL
Sbjct: 478 DIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDKEAANRGTTVYLCGKRIDMVPELL 537
Query: 587 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 646
S + SL V+RLAFS W++N +++ ++VI S L+Y AQ ID D
Sbjct: 538 SSNLCSLRSNVERLAFSCIWEMNHNAEILKTQFTKSVINSKASLTYAEAQMRID---DTN 594
Query: 647 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EY 705
+ D+ S++ L +++KILK KR +GAL L + + F D E
Sbjct: 595 KKD----------------DITESLRGLNKLAKILKRKRIENGALTLSSLEVRFHIDSET 638
Query: 706 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAF 765
P D + N + EEFMLLAN + A+ I FPD ALLR+HPAP
Sbjct: 639 HDPIDLQTKELMETNSMVEEFMLLANISVAQKIYDEFPDCALLRKHPAPPPSNYDILLKA 698
Query: 766 CSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDD 824
+++ T S+ SL+ A+ D + F+ L+ ATR M A YFCSG D
Sbjct: 699 AKSMNVEIHTDSAKALADSLDVAK---VDGFSYFNTLLRILATRCMMQAVYFCSG---MD 752
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLV 851
+D+ HY LA P+YTHFTSP+RRY +++
Sbjct: 753 SDFHHYGLASPIYTHFTSPIRRYKNII 779
>gi|195111154|ref|XP_002000144.1| GI10069 [Drosophila mojavensis]
gi|193916738|gb|EDW15605.1| GI10069 [Drosophila mojavensis]
Length = 979
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 174/523 (33%), Positives = 264/523 (50%), Gaps = 61/523 (11%)
Query: 347 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 406
+ PTGR+V I+ R +W Y G + + D P
Sbjct: 345 RTPTGRIVGIVRR--------------KWRQYCGILQPSL--------IEDTTRHIFVPA 382
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDAT-IEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
K P++ R+E AT ++ + + ID W S +P H + G
Sbjct: 383 DRKIPRI-------------RIETRQATKLQNQRIVVTIDSWPRNSRYPHGHFVRSLGPL 429
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
G + + IL E+ + FS E LS LP +PW + +E+ R DLR+ I ++DP
Sbjct: 430 GNMATENEVILLEHDVPHCKFSEEVLSFLPKMPWTITEEDYAKRVDLRDLYICSVDPPGC 489
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
TD+DDAL L +G VGVHIADVS+F+ PG ALD EA R T+VY++ ++I M+P L
Sbjct: 490 TDIDDALHCRELPNGNLEVGVHIADVSHFIRPGNALDKEAAARGTTVYLVGKRIDMVPEL 549
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS + SL G +R AFS+ W+++ +++ + ++VI+S ++YE AQ IID
Sbjct: 550 LSSNLCSLVGGEERFAFSVVWEVDHQANILAKRFHKSVIKSKRAMTYEEAQAIID----- 604
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
+ + ++ +S++ L ++KILK +R +GAL L + + F D E
Sbjct: 605 --------------DEAQTGEIAKSLRHLNRLAKILKKRRMDNGALVLASPEIRFQVDSE 650
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P + D N + EEFMLLAN + A+ IA F + A+LRRHP P
Sbjct: 651 THEPLEVEAKQMRDTNSMVEEFMLLANISVAQHIAAEFTECAVLRRHPKPPNTNFDPLIK 710
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKD 823
G ++ T + + SL++ +K D F+ +I ATR M A YF SG +
Sbjct: 711 AARYQGFEVVTDTGLELAHSLDKC---VKADNPYFNTMIRILATRCMMQAVYFISGSLQK 767
Query: 824 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
+ ++ HY LA +YTHFTSP+RRY D++VHR L A++ A+ Y
Sbjct: 768 E-EFFHYGLAAEIYTHFTSPIRRYSDIMVHRLLAASIGADSTY 809
Score = 48.1 bits (113), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%)
Query: 160 FAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEGD 219
+ PH SM+ + E L + ++ + N LE +EG + +LI G + NRAV+GD
Sbjct: 232 YPPHLSMKEILEGLRHKKLLQGSFQASRENYLEGNVNVEGYEKGILIQGRESLNRAVDGD 291
Query: 220 FVLIKVDRLSLWA 232
V +++ S W+
Sbjct: 292 IVAVELLPESEWS 304
>gi|427791021|gb|JAA60962.1| Putative exosomal 3'-5' exoribonuclease complex subunit, partial
[Rhipicephalus pulchellus]
Length = 908
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 168/445 (37%), Positives = 240/445 (53%), Gaps = 26/445 (5%)
Query: 425 KKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICC 483
K R+E A T+ + + ID W +S +P H++ G G+ + +L E+ I
Sbjct: 376 KIRIETRQAETLCRQRIVVSIDSWPRDSRYPLGHLVRALGEIGDRATENQVLLLEHDIPH 435
Query: 484 SGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISR 543
FS L CLP PW + +E RKDLR+ CI ++DP TD+DDAL G
Sbjct: 436 QCFSRAVLDCLPSTPWTIGPKEEQGRKDLRHLCICSVDPPGCTDIDDALHCREQPSGNYE 495
Query: 544 VGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFS 603
VGVHIADVS+FV P TALD EA R T+VY++ ++I M+P LLS ++ SL G +RLAFS
Sbjct: 496 VGVHIADVSHFVRPKTALDQEAANRGTTVYLVDQRIDMVPELLSSDLCSLRGGEERLAFS 555
Query: 604 IFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFE 663
+ W++ +VV+ +++I+S L+Y AQ ID K +
Sbjct: 556 VVWEMTPEAEVVNTDFHKSIIKSRAALTYAEAQARIDDK-------------------AK 596
Query: 664 WSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFL 722
D+ ++ L +++K+LK +R +GAL L +++ F D E P D + N +
Sbjct: 597 GDDLTLGLRGLNKLAKLLKARRIANGALTLASTEVRFHVDSETHDPIDVQTKQILETNSM 656
Query: 723 FEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFH 782
EEFMLLAN + A+ I + FP+ ALLRRHP+P L G +L S
Sbjct: 657 VEEFMLLANGSVAKHIFQEFPECALLRRHPSPAPANLEPLVKAGLSKGFELKVDSGLHLA 716
Query: 783 QSLEQAREKLKDDYVLFDILINY-ATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFT 841
+SL++A + D F++++ ATR M A YF SG + D+ HY LA P YTHFT
Sbjct: 717 ESLDKA---VLPDSPYFNVMLRMVATRCMARALYFSSGCVALE-DFFHYGLALPYYTHFT 772
Query: 842 SPLRRYPDLVVHRTLNAALEAEKLY 866
SP+RRY DL+VHR L + AE Y
Sbjct: 773 SPIRRYADLMVHRLLAVCVGAEGTY 797
>gi|381214351|ref|NP_001244210.1| DIS3-like exonuclease 2 isoform 2 [Homo sapiens]
gi|21753324|dbj|BAC04324.1| unnamed protein product [Homo sapiens]
Length = 603
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 177/495 (35%), Positives = 252/495 (50%), Gaps = 54/495 (10%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
IF + S E V+E L++G + + R+N EA+ D+ I G+ A+NRA+ G
Sbjct: 49 IFETYMSKEDVSEGLKRGTLIQGVLRINPKKFHEAFIPSPDGDRDIFIDGVVARNRALNG 108
Query: 219 DFVLIKVDRLSLWAKMKGFSNN--SSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNC 276
D V++K+ W +K SN+ + +S++P E G H KS D +
Sbjct: 109 DLVVVKLLPEEHWKVVKPESNDKETEAAYESDIPEELCGHHLPQQSLKSYND------SP 162
Query: 277 TLLSEKGIHHDDDSSSEAYNQEMIEREGYNYI----------NGHHPSTSDSTEKVSSSQ 326
++ E D Q ++ +G + +G P T D T +S
Sbjct: 163 DVIVEAQFDGSDSEDGHGITQNVL-VDGVKKLSVCVSEKGREDGDAPVTKDETTCISQDT 221
Query: 327 QNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDA 386
+ +++R + +VV I+E+ R GFL + A
Sbjct: 222 RALSEKSLQR-------------SAKVVYILEKKHSR-AATGFLKLL------------A 255
Query: 387 KKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDE 446
KN R+Y +P+ + P++ V +KD P R ++ T L RI +
Sbjct: 256 DKNSELF----RKYALFSPSDHRVPRIYVPLKDCPQDFVARPKDYANT----LFICRIVD 307
Query: 447 WNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEE 505
W E+ F + G+ GE+EP+ IL E + S FS E L CLP +PW +P EE
Sbjct: 308 WKEDCNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLECLPQGLPWTIPPEE 367
Query: 506 LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEA 565
R+DLR CIFTIDPSTA DLDDALS + L+DG +VGVHIADVSYFV G+ LD A
Sbjct: 368 FSKRRDLRKDCIFTIDPSTARDLDDALSCKPLADGNFKVGVHIADVSYFVPEGSDLDKVA 427
Query: 566 QVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIR 625
R+TSVY++Q+ +PMLP LL EE+ SLNP D+L FS+ W L G ++D W GRT+IR
Sbjct: 428 AERATSVYLVQKVVPMLPRLLCEELCSLNPMSDKLTFSVIWTLTPEGKILDEWFGRTIIR 487
Query: 626 SCCKLSYEHAQDIID 640
SC KLSYEHAQ +I+
Sbjct: 488 SCTKLSYEHAQSMIE 502
>gi|401424762|ref|XP_003876866.1| putative rrp44p homologue [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322493110|emb|CBZ28394.1| putative rrp44p homologue [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 920
Score = 274 bits (701), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 185/524 (35%), Positives = 268/524 (51%), Gaps = 53/524 (10%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTG+VV ++ S R G L+ G + K N S D I P +
Sbjct: 264 PTGKVVGLL--SSNRRPFCGSLD--------EGELEQVKANTS-----DNVSILFQPKNS 308
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ P++ + + + D + KRL + ID+W S FP H + V G+ G+
Sbjct: 309 RIPRIRISTRHVQDLMDKRL------------SVVIDDWPLYSSFPVGHYVEVLGKIGDR 356
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDL 528
+ + IL EN + FS CLP W V ++E R DLR+ CI ++DP D+
Sbjct: 357 DTEATVILLENDVPHYDFSEAVHDCLPKGQWSVTKDEEARRLDLRDLCIVSVDPLGCRDI 416
Query: 529 DDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSE 588
DDAL ++ VGVHIADV++F+ GTA+D EA RSTSVY++ R+I MLP LL+E
Sbjct: 417 DDALHCRVVNGNHLEVGVHIADVTHFLHEGTAMDDEAAKRSTSVYLVDRRINMLPQLLTE 476
Query: 589 EVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESS 648
+ SL DR AFSI W+ + +VV W G+T+IRS L Y AQ +ID D
Sbjct: 477 NLCSLVEAEDRYAFSILWEFDENLNVVRDWFGKTIIRSRGALYYGDAQRMIDNPADT--- 533
Query: 649 NTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGT 707
SD+ S++ L +SK K++R DGAL L + + F D E+
Sbjct: 534 ----------------SDIAVSLRELMRLSKHFKEQREKDGALFLASQEFKFKVDNEHVN 577
Query: 708 PYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF-EAFC 766
P D + + N + EE+ML AN A + ++P LLRRH P +A
Sbjct: 578 PTDMQVYQTFEANSMIEEWMLYANAAVATKVYESYPQWTLLRRHERPAEGAFDTLNDALY 637
Query: 767 SKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDT 825
K ++LD ++S ++SL++ E +D Y F+ LI TR ++ A YF SG D
Sbjct: 638 GKLHVRLDDTTSLTLNKSLDKC-EDPQDPY--FNKLIRILTTRCLRQAQYFSSGGIPKD- 693
Query: 826 DWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKH 869
++ H+ LA P+YTHFTSP+RRY D++ HR L AA+ E + +H
Sbjct: 694 EFYHFGLAMPIYTHFTSPIRRYADVIAHRQLAAAIGIESVSEQH 737
Score = 41.2 bits (95), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Query: 133 IANDSSCWAYTNKDDNPS-HQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRL 191
IA+DS D+ +S + K+F PH M A++ ++ G +K RV+ +
Sbjct: 137 IASDSDLLEKIQYDEPEGMKESPSTRKLFTPHLGMAAMDAGVQDGSLYKGKLRVSESSCF 196
Query: 192 --EAYCKIEGVQTD-VLITGIAAQNRAVEGDFVLIKVDRLSLW 231
E K EG +LI G A NRA+ D V +++ +S W
Sbjct: 197 FGEIRGKFEGHSFQRILIQGRANMNRAIHDDVVAVQLLPVSSW 239
>gi|315039361|ref|XP_003169056.1| mitotic control protein dis3 [Arthroderma gypseum CBS 118893]
gi|311337477|gb|EFQ96679.1| mitotic control protein dis3 [Arthroderma gypseum CBS 118893]
Length = 1043
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 214/719 (29%), Positives = 329/719 (45%), Gaps = 132/719 (18%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
+++ ++SM + + G + ++ V+ +N LE + + +LI G NRA+ G
Sbjct: 255 LYSAYYSMSKIMTMIRAGTLHQGIFNVSPYNYLEGSVNVPAFEKSLLILGRDNSNRAISG 314
Query: 219 DFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCTL 278
D V+++V LP + ++ + +
Sbjct: 315 DIVVVEV-----------------------LPKD-----------------QWKTPSSKI 334
Query: 279 LSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLS 338
+ E+ + DD+ +E + ERE + + K +
Sbjct: 335 IDEEALTKDDNPEAEENEAVVTERE--------RKALQEEVRKAHGT------------- 373
Query: 339 AMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDR 398
+ S P +PT +VV II+R+ R+ VG ++ + + R+ +
Sbjct: 374 -VTESRP--QPTAKVVGIIKRNWRQ--YVGHIDGSSSSHASSAGRR-------------Q 415
Query: 399 EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHV 458
+ + + P + PK I+ R +G+ + ++ ID W+ +S +P H
Sbjct: 416 QTVFVIPMDKRVPK-----------IRIRTRQGNELMGQRILIT-IDSWDRDSRYPVGHF 463
Query: 459 LHVFG----RGGEVEPQINAILYENAICCSGFSPESLSCLP--CVPWEVPQEE----LLS 508
+ G +G E E A+L E + F L CLP W+VP ++
Sbjct: 464 VRSLGEVETKGAETE----ALLLEYDVQYKPFPQTVLDCLPPEGHDWKVPADKSDPGWKD 519
Query: 509 RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVR 568
RKDLR + +IDP D+DDAL L++G VGVHIADVS FV P A+D EA +R
Sbjct: 520 RKDLRELLVCSIDPPGCQDIDDALHSRPLTNGNFEVGVHIADVSNFVRPNNAMDTEASMR 579
Query: 569 STSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCC 628
T+VY++ ++I MLP+LL ++ SL P V+R AFS+ W++ ++V ++VI S
Sbjct: 580 GTTVYLVDKRIDMLPMLLGTDLCSLKPHVERYAFSVLWEITPEAEIVSSSFTKSVIFSRE 639
Query: 629 KLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTD 688
SYE AQ ID Q + D+ S+++L +SK+L+ KR
Sbjct: 640 AFSYEQAQLRID-------------------DQSKTDDLTASMRTLLRLSKLLRQKRMDA 680
Query: 689 GALRLENSKPVFLFD-EYGTPYDSVLS-GREDLNFLFEEFMLLANKTAAEVIARAFPDSA 746
GAL L + + D E P V + D N L EEFMLLAN + A I +FP +A
Sbjct: 681 GALNLASPEVRIETDSELSDPVADVKTKALLDTNSLVEEFMLLANISVAARIYESFPQTA 740
Query: 747 LLRRHPAPNMRKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN- 804
LLRRH P E K L LD SSS SL++ + + F+ LI
Sbjct: 741 LLRRHATPPPSNFEELITQLSKKRNLTLDVSSSLALANSLDKC---VDERNPFFNTLIRI 797
Query: 805 YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE 863
ATR M A YFC+G ++++ HY LA P+YTHFTSP+RRY DLVVHR L AA+ E
Sbjct: 798 LATRCMTSAEYFCAG-AHSESEFRHYGLASPIYTHFTSPIRRYADLVVHRQLAAAIGYE 855
>gi|398017919|ref|XP_003862146.1| rrp44p homologue, putative [Leishmania donovani]
gi|322500375|emb|CBZ35452.1| rrp44p homologue, putative [Leishmania donovani]
Length = 920
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 185/524 (35%), Positives = 268/524 (51%), Gaps = 53/524 (10%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTG+VV ++ S R G L+ G + K N S D I P +
Sbjct: 264 PTGKVVGLL--SSNRRPFCGSLD--------EGELEQVKANMS-----DNVSILFQPKNN 308
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ P++ + + + D + KRL + ID+W S FP H + V G+ G+
Sbjct: 309 RIPRIRISTRHVQDLMDKRL------------SVVIDDWPLYSSFPVGHYVEVLGKIGDR 356
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDL 528
+ + IL EN + FS CLP W V ++E R DLR+ C+ ++DP D+
Sbjct: 357 DTEATVILLENDVPHYDFSEAVHDCLPKGQWSVAKDEEARRLDLRDLCVVSVDPLGCRDI 416
Query: 529 DDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSE 588
DDAL ++ VGVHIADV++F+ GTA+D EA RSTSVY++ R+I MLP LL+E
Sbjct: 417 DDALHCRVVNGNHLEVGVHIADVTHFLHEGTAMDDEAAKRSTSVYLVDRRINMLPQLLTE 476
Query: 589 EVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESS 648
+ SL DR AFSI W+ + +VV W G+T+IRS L Y AQ +ID D
Sbjct: 477 NLCSLVEAEDRYAFSILWEFDENLNVVRDWFGKTIIRSRGALYYGDAQRMIDNPTDT--- 533
Query: 649 NTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGT 707
SD+ S++ L +SK K +R DGAL L + + F D E+
Sbjct: 534 ----------------SDIAVSLRELMRLSKHFKAQREKDGALFLASQEFKFKVDNEHVN 577
Query: 708 PYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF-EAFC 766
P D + + N + EE+ML AN A + ++P LLRRH P +A
Sbjct: 578 PTDMQVYQTFEANSMIEEWMLYANAAVATKVYESYPQWTLLRRHERPAEGAFDTLNDALY 637
Query: 767 SKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDT 825
K ++LD ++S ++SL++ E +D Y F+ LI TR ++ A YF SG D
Sbjct: 638 GKLHVRLDDTTSLTLNKSLDKC-EDPQDPY--FNKLIRILTTRCLRQAQYFSSGGIPKD- 693
Query: 826 DWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKH 869
++ H+ LA P+YTHFTSP+RRY D++VHR L AA+ E + +H
Sbjct: 694 EFYHFGLAMPIYTHFTSPIRRYADVIVHRQLAAAIGIENVSEQH 737
>gi|70993518|ref|XP_751606.1| exosome complex exonuclease exoribonuclease (Rrp44) [Aspergillus
fumigatus Af293]
gi|66849240|gb|EAL89568.1| exosome complex exonuclease exoribonuclease (Rrp44), putative
[Aspergillus fumigatus Af293]
gi|159125468|gb|EDP50585.1| exosome complex exonuclease exoribonuclease (Rrp44), putative
[Aspergillus fumigatus A1163]
Length = 1034
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 220/725 (30%), Positives = 334/725 (46%), Gaps = 134/725 (18%)
Query: 155 ARCKIFAP-HWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQN 213
AR ++F P ++SM + L G + ++ V+ +N LE + +LI G N
Sbjct: 250 ARGELFYPEYYSMSKIMTGLRAGTLHQGVFNVSPYNYLEGSVNVAAFDKPLLILGRDNSN 309
Query: 214 RAVEGDFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEY 273
RA+ GD V+I+V LP + ++
Sbjct: 310 RAIAGDVVVIEV-----------------------LPKD-----------------QWKS 329
Query: 274 SNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNA 333
+ L+ E+ + +D+ +E N+E++ TEK + Q + A
Sbjct: 330 PSTKLVDEEAVTRNDNPEAED-NEEVV------------------TEKERKALQEEVKKA 370
Query: 334 IERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSL 393
+ S +PT +VV +I+R+ R+ VG ++ + R+
Sbjct: 371 HGK-----HSEGRPQPTAKVVGVIKRNWRQ--YVGHVDQSSTGASASSGRR--------- 414
Query: 394 SVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPF 453
++ + + P + PK+ V + D + +R + ID W+ +S +
Sbjct: 415 ----QQNVFVLPMDKRIPKIRVRTRQASDLLGQR------------ILVTIDAWDRDSRY 458
Query: 454 PQAHVLHVFG----RGGEVEPQINAILYENAICCSGFSPESLSCLP--CVPWEVPQEE-- 505
P H + G +G E E A+L E + F L CLP W+VP ++
Sbjct: 459 PTGHFIRSLGELETKGAETE----ALLLEYDVQYKPFPKAVLDCLPPEGHDWKVPADKEH 514
Query: 506 --LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDI 563
R+DLR+ + +IDP D+DDAL L +G VGVHIADVS+FV P A+D+
Sbjct: 515 VGWKGRRDLRDILVCSIDPPGCQDIDDALHARPLPNGNFEVGVHIADVSHFVKPNNAMDL 574
Query: 564 EAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTV 623
EA R T+VY++ ++I MLP LL ++ SL P V+R AFS+ W++ +VV ++V
Sbjct: 575 EASARGTTVYLVDKRIDMLPHLLGTDLCSLKPYVERYAFSVLWEMTPNAEVVSAEFTKSV 634
Query: 624 IRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKD 683
IRS SYE AQ ID S N ++ +S+++L +SKIL+
Sbjct: 635 IRSREAFSYEQAQKRIDDP----SQN---------------DELTQSMRTLLRLSKILRQ 675
Query: 684 KRFTDGALRLENSKPVFLF--DEYGTPYDSVLS-GREDLNFLFEEFMLLANKTAAEVIAR 740
KR GAL L + + DE G P V + N L EEFML AN T A I
Sbjct: 676 KRMDAGALNLASPEVRIETDSDEVGDPLTDVKTKAMLATNSLVEEFMLHANITVAAKIYD 735
Query: 741 AFPDSALLRRHPAPNMRKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLF 799
+F +ALLRRH P + E K L+LD SSS SL++ + + F
Sbjct: 736 SFSQTALLRRHATPPPQNFEELINQLSKKRNLELDVSSSRALADSLDRC---VDPENPFF 792
Query: 800 DILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNA 858
+ L+ ATR M A YFC+G ++++ HY LA P+YTHFTSP+RRY DL+VHR L A
Sbjct: 793 NTLVRILATRCMTSAEYFCAGAHA-ESEFRHYGLASPIYTHFTSPIRRYADLLVHRQLAA 851
Query: 859 ALEAE 863
A+ E
Sbjct: 852 AIGYE 856
>gi|426338893|ref|XP_004065475.1| PREDICTED: LOW QUALITY PROTEIN: DIS3-like exonuclease 2 [Gorilla
gorilla gorilla]
Length = 604
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 177/495 (35%), Positives = 251/495 (50%), Gaps = 54/495 (10%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
IF + S E V+E L++G + + R+N E + D+ I G+ A+NRA+ G
Sbjct: 49 IFETYMSKEDVSEGLKRGTLIQGVLRINPKKFHEGFIPSPDGDRDIFIDGVVARNRALNG 108
Query: 219 DFVLIKVDRLSLWAKMKGFSNN--SSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNC 276
D V++K+ W +K SN+ + +S++P E G H KS D
Sbjct: 109 DLVVVKLLPEEHWKVVKPESNDKETEAAYESDIPEELCGHHLPQQSLKSYND------GP 162
Query: 277 TLLSEKGIHHDDDSSSEAYNQEMIEREGYNYI----------NGHHPSTSDSTEKVSSSQ 326
++ E D Q ++ +G + +G P T D T +S
Sbjct: 163 DVIVEAQFDGSDSEDGHGITQNVL-VDGVKKLSVCVSEKGREDGDAPVTKDETTCISQDT 221
Query: 327 QNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDA 386
+ +++R + +VV I+E+ R GFL + A
Sbjct: 222 RALSEKSLQR-------------SAKVVYILEKKHSR-AATGFLKLL------------A 255
Query: 387 KKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDE 446
KN R+Y +P+ + P++ V +KD P R ++ T L RI +
Sbjct: 256 DKNSELF----RKYALFSPSDHRVPRIYVPLKDCPQDFVARPKDYANT----LFICRIVD 307
Query: 447 WNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEE 505
W E+ F + G+ GE+EP+ IL E + S FS E L CLP +PW +P EE
Sbjct: 308 WKEDCNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLECLPQGLPWTIPPEE 367
Query: 506 LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEA 565
L R+DLR CIFTIDPSTA DLDDALS + L+DG +VGVHIADVSYFV G+ LD A
Sbjct: 368 LSKRRDLRKDCIFTIDPSTARDLDDALSCKPLADGNFKVGVHIADVSYFVPEGSDLDKVA 427
Query: 566 QVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIR 625
R+TSVY++Q+ +PMLP LL EE+ SLNP D+L FS+ W L G ++D W GRT+IR
Sbjct: 428 AERATSVYLVQKVVPMLPRLLCEELCSLNPMSDKLTFSVIWTLTPEGKILDEWFGRTIIR 487
Query: 626 SCCKLSYEHAQDIID 640
SC KLSYEHAQ +I+
Sbjct: 488 SCTKLSYEHAQSMIE 502
>gi|302503963|ref|XP_003013941.1| hypothetical protein ARB_08053 [Arthroderma benhamiae CBS 112371]
gi|291177507|gb|EFE33301.1| hypothetical protein ARB_08053 [Arthroderma benhamiae CBS 112371]
Length = 1044
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 215/719 (29%), Positives = 326/719 (45%), Gaps = 132/719 (18%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
+++ ++SM + + G + ++ V+ +N LE + + +LI G NRA+ G
Sbjct: 255 LYSAYYSMSKIMTLIRAGTLHQGIFNVSPYNYLEGSVNVPAFEKSLLILGRDNSNRAISG 314
Query: 219 DFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCTL 278
D V+++V LP + ++ + +
Sbjct: 315 DIVVVEV-----------------------LPKD-----------------QWKTPSSKI 334
Query: 279 LSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLS 338
+ E+ + DD+ +E + ERE + TE
Sbjct: 335 IDEEALTKDDNPEAEENEAVVTERERKALQEEVRKAHGTGTE------------------ 376
Query: 339 AMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDR 398
S P +PT +VV II+R N Q+ + GS +++S + +
Sbjct: 377 ----SRP--QPTAKVVGIIKR-----------NWRQYVGHIDGS----STSQASSAGRRQ 415
Query: 399 EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHV 458
+ + + P + PK+ + + + + +R + ID W+ +S +P H
Sbjct: 416 QTVFVIPMDKRVPKIRIRTRQANELMGQR------------ILITIDAWDRDSRYPVGHF 463
Query: 459 LHVFG----RGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEE----LLS 508
+ G +G E E A+L E + F L CLP W+VP++
Sbjct: 464 VRSLGEVETKGAETE----ALLLEYDVQYRPFPQTVLDCLPPEGHDWKVPKDMSDPGWND 519
Query: 509 RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVR 568
RKDLR+ + +IDP D+DDAL L +G VGVHIADVS FV P A+D EA +R
Sbjct: 520 RKDLRDLLVCSIDPPGCQDIDDALHSRPLPNGNFEVGVHIADVSNFVRPNNAMDTEASMR 579
Query: 569 STSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCC 628
T+VY++ ++I MLP+LL ++ SL P V+R AFS+ W++ +VV ++VI S
Sbjct: 580 GTTVYLVDKRIDMLPMLLGTDLCSLKPHVERYAFSVLWEITPDAEVVSSSFTKSVIFSRE 639
Query: 629 KLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTD 688
SYE AQ ID Q + D+ S+++L +SK+L+ KR
Sbjct: 640 AFSYEQAQLRID-------------------DQSKTDDLTASMRTLLRLSKLLRQKRMDA 680
Query: 689 GALRLENSKPVFLFD-EYGTPYDSVLS-GREDLNFLFEEFMLLANKTAAEVIARAFPDSA 746
GAL L + + D E P V + D N L EEFMLLAN + A I +FP +A
Sbjct: 681 GALNLASPEVRIETDSELSDPVADVKTKALLDTNSLVEEFMLLANISVAARIYESFPQTA 740
Query: 747 LLRRHPAPNMRKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN- 804
LLRRH P E K L LD SSS SL++ + + F+ LI
Sbjct: 741 LLRRHATPPPSNFEELITQLSKKRNLTLDVSSSLALANSLDKC---VDERNPFFNTLIRI 797
Query: 805 YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE 863
ATR M A YFC+G ++++ HY LA P+YTHFTSP+RRY DLVVHR L AA+ E
Sbjct: 798 LATRCMTSAEYFCAG-AHSESEFRHYGLASPIYTHFTSPIRRYADLVVHRQLAAAIGYE 855
>gi|261334743|emb|CBH17737.1| exosome complex exonuclease RRP44p homologue,putative [Trypanosoma
brucei gambiense DAL972]
Length = 972
Score = 273 bits (699), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 175/463 (37%), Positives = 245/463 (52%), Gaps = 38/463 (8%)
Query: 401 IQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLH 460
+ P + P++ + L D KRL + ID+W E S FP H +
Sbjct: 395 VLFQPKDNRIPRIRITTAHLGDLKDKRL------------SVIIDDWGEHSSFPVGHYVE 442
Query: 461 VFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTI 520
V G G+ + + IL EN I FS CLP W V +EEL +R DLR+ C+ ++
Sbjct: 443 VLGTIGDKDTEAKVILLENDIPHYDFSEAVYDCLPKGEWNVTEEELGNRLDLRDLCVVSV 502
Query: 521 DPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIP 580
DP D+DDAL R++ VGVHIADV++F+ GTA+D EA RSTSVY++ R+I
Sbjct: 503 DPLGCRDIDDALHCRRVNGNHLEVGVHIADVTHFLKEGTAMDEEAAKRSTSVYLVDRRIN 562
Query: 581 MLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIID 640
MLP LL+E + S+ DR AFSI W+ + VV + G+TVIRS L Y AQ +ID
Sbjct: 563 MLPQLLTENLCSIVADEDRYAFSIMWEFDENYSVVREFFGKTVIRSRAALYYGDAQRMID 622
Query: 641 GKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVF 700
D S+ S++ L ++S+ + +R DGAL L + + F
Sbjct: 623 DPED-------------------ESEAAVSLRYLMQLSRHFRKRREKDGALFLCSQEFKF 663
Query: 701 LFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKL 759
D ++ P D D N + EE+ML AN AA + +FP LLRRH AP
Sbjct: 664 KVDNDHVNPTDMQAYQTFDSNSMIEEWMLFANAAAARRVYASFPRWTLLRRHQAPAENAF 723
Query: 760 REF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILI-NYATRPMQLASYFC 817
EA K G++LD ++S ++SLE+ + D Y F+ LI TR ++ A YF
Sbjct: 724 DTLNEAIRRKIGVKLDDTTSLALNESLEKCVDP-SDPY--FNRLIRTLVTRCLRQAQYFS 780
Query: 818 SGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
S + D ++ H+ LA P+YTHFTSP+RRY D++VHR L AAL
Sbjct: 781 SSEVSKD-EFHHFGLAMPIYTHFTSPIRRYADVIVHRQLAAAL 822
>gi|14250908|emb|CAC39259.1| Rrp44p homologue [Trypanosoma brucei]
Length = 972
Score = 273 bits (699), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 175/463 (37%), Positives = 245/463 (52%), Gaps = 38/463 (8%)
Query: 401 IQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLH 460
+ P + P++ + L D KRL + ID+W E S FP H +
Sbjct: 395 VLFQPKDNRIPRIRITTAHLGDLKDKRL------------SVIIDDWGEHSSFPVGHYVE 442
Query: 461 VFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTI 520
V G G+ + + IL EN I FS CLP W V +EEL +R DLR+ C+ ++
Sbjct: 443 VLGTIGDKDTEAKVILLENDIPHYDFSEAVYDCLPKGEWNVTEEELGNRLDLRDLCVVSV 502
Query: 521 DPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIP 580
DP D+DDAL R++ VGVHIADV++F+ GTA+D EA RSTSVY++ R+I
Sbjct: 503 DPLGCRDIDDALHCRRVNGNHLEVGVHIADVTHFLKEGTAMDEEAAKRSTSVYLVDRRIN 562
Query: 581 MLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIID 640
MLP LL+E + S+ DR AFSI W+ + VV + G+TVIRS L Y AQ +ID
Sbjct: 563 MLPQLLTENLCSIVADEDRYAFSIMWEFDENYSVVREFFGKTVIRSRAALYYGDAQRMID 622
Query: 641 GKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVF 700
D S+ S++ L ++S+ + +R DGAL L + + F
Sbjct: 623 DPED-------------------ESEAAVSLRYLMQLSRHFRKRREKDGALFLCSQEFKF 663
Query: 701 LFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKL 759
D ++ P D D N + EE+ML AN AA + +FP LLRRH AP
Sbjct: 664 KVDNDHVNPTDMQAYQTFDSNSMIEEWMLFANAAAARRVYASFPRWTLLRRHQAPAENAF 723
Query: 760 REF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILI-NYATRPMQLASYFC 817
EA K G++LD ++S ++SLE+ + D Y F+ LI TR ++ A YF
Sbjct: 724 DTLNEAIRRKIGVKLDDTTSLALNESLEKCVDP-SDPY--FNRLIRTLVTRCLRQAQYFS 780
Query: 818 SGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
S + D ++ H+ LA P+YTHFTSP+RRY D++VHR L AAL
Sbjct: 781 SSEVSKD-EFHHFGLAMPIYTHFTSPIRRYADVIVHRQLAAAL 822
>gi|323453416|gb|EGB09288.1| hypothetical protein AURANDRAFT_25192 [Aureococcus anophagefferens]
Length = 966
Score = 273 bits (699), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 181/520 (34%), Positives = 266/520 (51%), Gaps = 53/520 (10%)
Query: 345 PTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLT 404
P G VV +++R PR+ + G L+ + D R+ + +
Sbjct: 329 PASEVAGHVVGVLKREPRQ--LCGSLD---------EATGDVHATRA-------QSVLFV 370
Query: 405 PTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGR 464
P ++PK+ V + L RL M +V A +D W ++ +P+ H + G+
Sbjct: 371 PVDRRFPKVRVETRQL-----ARLAG------MRVVVA-VDAWADDERYPRGHYVSTLGK 418
Query: 465 GGEVEPQINAILYENAICCSGFSPESLSCLP--CVPWEVPQEELLSRKDLRNFCIFTIDP 522
G+ + IL E + + FS L+CLP + + QEE+ R DLR + +IDP
Sbjct: 419 RGDKAVETALILQELEVATAPFSTAVLACLPPEGEAFVITQEEVARRMDLRALDVCSIDP 478
Query: 523 STATDLDDAL-SIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPM 581
D+DDAL + L++G +VGVHIADV++FV G+ LD+EA R TS Y++ R++ M
Sbjct: 479 PGCRDIDDALHCVGPLANGNYQVGVHIADVTHFVASGSPLDLEAAKRGTSTYLVDRRLDM 538
Query: 582 LPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDG 641
LP+LL+ + SL GV+RLAFS +L AGDVV +TVI+S L+Y AQ ID
Sbjct: 539 LPILLTANLCSLRGGVERLAFSALMELTPAGDVVAAEFAKTVIKSRAALTYHQAQVFID- 597
Query: 642 KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFL 701
D + ++ G V S++ L ++ + L+ KR GAL L + + F+
Sbjct: 598 --DADGAHDSGP-------------VAASVRRLAKLGRALRAKRMAAGALTLASPEVKFM 642
Query: 702 F-DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLR 760
+E +P D + N EEFMLLAN A+ + + +P +LR HPAP +
Sbjct: 643 LSNESDSPTDVGAYQLVEANSTVEEFMLLANVEVAKFLLKKYPALTILRHHPAPPPERFE 702
Query: 761 EFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGD 820
+A + HG LD ++S SL+ A + DD + TR M A YFCS D
Sbjct: 703 RLQAMLAAHGFDLDVATSKTLADSLDAAAK--PDDAYFNQLARILTTRCMAPAKYFCSND 760
Query: 821 FKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
KD D+ HY LA VYTHFTSP+RRY D+V HR L AA+
Sbjct: 761 -KDAPDYVHYGLAAAVYTHFTSPIRRYADVVAHRLLAAAV 799
>gi|146091632|ref|XP_001470079.1| putative rrp44p homologue [Leishmania infantum JPCM5]
gi|134084873|emb|CAM69271.1| putative rrp44p homologue [Leishmania infantum JPCM5]
Length = 920
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 185/524 (35%), Positives = 268/524 (51%), Gaps = 53/524 (10%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTG+VV ++ S R G L+ G + K N S D I P +
Sbjct: 264 PTGKVVGLL--SSNRRPFCGSLD--------EGELEQVKANMS-----DNVSILFQPKNN 308
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ P++ + + + D + KRL + ID+W S FP H + V G+ G+
Sbjct: 309 RIPRIRISTRHVQDLMDKRL------------SVVIDDWPLYSSFPVGHYVEVLGKIGDR 356
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDL 528
+ + IL EN + FS CLP W V ++E R DLR+ C+ ++DP D+
Sbjct: 357 DTEAMVILLENDVPHYDFSEAVHDCLPKGQWSVAKDEEARRLDLRDLCVVSVDPLGCRDI 416
Query: 529 DDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSE 588
DDAL ++ VGVHIADV++F+ GTA+D EA RSTSVY++ R+I MLP LL+E
Sbjct: 417 DDALHCRVVNGNHLEVGVHIADVTHFLHEGTAMDDEAAKRSTSVYLVDRRINMLPQLLTE 476
Query: 589 EVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESS 648
+ SL DR AFSI W+ + +VV W G+T+IRS L Y AQ +ID D
Sbjct: 477 NLCSLVEAEDRYAFSILWEFDENLNVVRDWFGKTIIRSRGALYYGDAQRMIDNPTDT--- 533
Query: 649 NTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGT 707
SD+ S++ L +SK K +R DGAL L + + F D E+
Sbjct: 534 ----------------SDIAVSLRELMRLSKHFKAQREKDGALFLASQEFKFKVDNEHVN 577
Query: 708 PYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF-EAFC 766
P D + + N + EE+ML AN A + ++P LLRRH P +A
Sbjct: 578 PTDMQVYQTFEANSMIEEWMLYANAAVATKVYESYPQWTLLRRHERPAEGAFDTLNDALY 637
Query: 767 SKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDT 825
K ++LD ++S ++SL++ E +D Y F+ LI TR ++ A YF SG D
Sbjct: 638 GKLHVRLDDTTSLTLNKSLDKC-EDPQDPY--FNKLIRILTTRCLRQAQYFSSGGIPKD- 693
Query: 826 DWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKH 869
++ H+ LA P+YTHFTSP+RRY D++VHR L AA+ E + +H
Sbjct: 694 EFYHFGLAMPIYTHFTSPIRRYADVIVHRQLAAAIGIENVSEQH 737
>gi|407853329|gb|EKG06373.1| mitochondrial exoribonuclease DSS-1, putative [Trypanosoma cruzi]
Length = 604
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 181/476 (38%), Positives = 260/476 (54%), Gaps = 40/476 (8%)
Query: 486 FSPESLSCLPCVPWEVPQEELL---SRKDLRNF-CIFTIDPSTATDLDDALSIERLSDGI 541
FS E+ +C+P +EVP +++L R+DLR + +IDP+TA DLDDALSI G
Sbjct: 4 FSDEAYACVP-EEFEVPDKQVLLHMGRRDLREEEFVCSIDPATARDLDDALSITSTPGGY 62
Query: 542 SRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLA 601
RVGVHIADVSYFV G+ LD EA+ RSTSVY++++ IPMLP LSE+ SLNPG D+ A
Sbjct: 63 -RVGVHIADVSYFVPAGSPLDEEARERSTSVYLVEQVIPMLPRKLSEDYCSLNPGSDKFA 121
Query: 602 FSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGE--GWPQLY 659
FS + L+ G+V W G++VIR+ C+L+YE AQ I+DG V + G+ L
Sbjct: 122 FSCIFHLDHHGNVKSEWFGQSVIRNRCRLTYEDAQRILDGDKTVFDTLDFGDEKDVRHLC 181
Query: 660 GQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGT---PYDSVLSGR 716
+ E SI+ L+E++ ++ G L + N K +LF++ PY +S +
Sbjct: 182 IRIEV-----SIRKLFELASKMRSASMNRGRLTIGNMKVRYLFEDIANPTFPYGFGISRQ 236
Query: 717 EDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTS 776
+ N+L EEFMLLAN AE I + PD ALLRRH P+ +K+ + S GL+L
Sbjct: 237 IEANWLVEEFMLLANARVAEKIVQYMPDQALLRRHEPPDRKKILTLKEALSSVGLELRGG 296
Query: 777 SSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPV 836
SS LE + D Y +++ Y+ ++ A YF +G + + GHYALA P
Sbjct: 297 SSKSLQGFLENTKN--SDFYDELCVILKYS---LKQAVYFVNGCEETEAYRGHYALALPW 351
Query: 837 YTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDA 896
YTHFTSP+RRY D++ HR L ALE E + K + PK G
Sbjct: 352 YTHFTSPIRRYSDIIAHRQLLCALEIESIV-KESKGGPKERRHPVSPGSI---------- 400
Query: 897 AESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLK 952
+A ++ KY P +++ ++ N +K+ R V DA + ++ LK
Sbjct: 401 -------DANQLSTRKYFYPVSEV-ESIVEKANSKKIKARQVSDASLGIFFCYYLK 448
>gi|195374758|ref|XP_002046170.1| GJ12662 [Drosophila virilis]
gi|194153328|gb|EDW68512.1| GJ12662 [Drosophila virilis]
Length = 1298
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 157/424 (37%), Positives = 236/424 (55%), Gaps = 40/424 (9%)
Query: 456 AHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWE-------------VP 502
A ++ GR G ++ ++ AIL+ N S VP+E V
Sbjct: 658 AELVQPVGRVGNLDDELKAILFHN------------SLRDVVPFEERFNQMYAQSAPPVT 705
Query: 503 QEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALD 562
++L++R+D+R C+FTIDP TA DLDDALSIE+L + + VGVHI+DVS+++ + LD
Sbjct: 706 SQDLVNRRDMRKSCVFTIDPLTARDLDDALSIEQLGENVFEVGVHISDVSHYLQENSELD 765
Query: 563 IEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR-WIGR 621
+ RSTS+Y+ I MLP L SL PG D+ +FS+FW ++ G+ +D+ R
Sbjct: 766 NIVKERSTSIYLANEVIHMLPQTLCFRC-SLLPGEDKFSFSVFWRMDGDGNQLDKPQFTR 824
Query: 622 TVIRSCCKLSYEHAQDIIDG---KF-DVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEV 677
+++ SC + +YEHAQ IID +F DV+ +P + F +D+V+ + L+ +
Sbjct: 825 SIMNSCTQFAYEHAQKIIDNPRERFTDVD--------FPNILNGFTVNDIVKRVTWLHGI 876
Query: 678 SKILKDKRFTDGALRLENSKPVFLFDEY-GTPYDSVLSGREDLNFLFEEFMLLANKTAAE 736
+ ++ KRF +GAL + N+K F D G P + + + N + EEFMLLAN+ A+
Sbjct: 877 ACNMRGKRFDNGALTINNAKVRFSLDPLTGEPMGFEVEKQREANHMIEEFMLLANQAVAK 936
Query: 737 VIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDY 796
I A+P A+LR HP P + L+ G LD SSS S+++ + D
Sbjct: 937 FIHDAYPKIAVLRNHPPPLTKSLKSLREKLLSQGFDLDYSSSKALQASMQRLCSEAADPI 996
Query: 797 VLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTL 856
+ L +PM A+YFCS + +D HYAL+ P+YTHFTSP+RRYPD++VHR L
Sbjct: 997 AMSACLSQLLMKPMARATYFCSDGKTEPSDLWHYALSIPIYTHFTSPIRRYPDVMVHRLL 1056
Query: 857 NAAL 860
A L
Sbjct: 1057 AAGL 1060
>gi|195035982|ref|XP_001989450.1| GH18811 [Drosophila grimshawi]
gi|193893646|gb|EDV92512.1| GH18811 [Drosophila grimshawi]
Length = 979
Score = 273 bits (698), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 175/523 (33%), Positives = 263/523 (50%), Gaps = 61/523 (11%)
Query: 347 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 406
+ PTGR+V I+ R +W Y G + + D P
Sbjct: 345 RTPTGRIVGIVRR--------------KWRQYCGILQPSL--------IEDTTRHIFVPA 382
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDAT-IEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
K P++ R+E A+ ++ + + ID W S +P H + G
Sbjct: 383 DRKIPRI-------------RIETRQASKLQNQRIIVTIDSWPRNSRYPHGHFVRSLGPL 429
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
G + + IL E+ + FS E L LP +PW + +E+ R DLR+ I ++DP
Sbjct: 430 GNMATENEVILLEHDVPHCKFSEEVLGFLPKMPWSITEEDYAKRVDLRDLYICSVDPPGC 489
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
TD+DDAL L +G VGVHIADVS+F+ PG A+D EA R T+VY++ ++I M+P L
Sbjct: 490 TDIDDALHCRELPNGNLEVGVHIADVSHFIRPGNAMDKEAAARGTTVYLVGKRIDMVPEL 549
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS + SL GV+R AFS W+++ +++D+ ++VI+S ++YE AQ +ID
Sbjct: 550 LSSNLCSLVGGVERFAFSCVWEVDREANILDKRFHKSVIKSKRAMTYEEAQALIDD---- 605
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
P G+ + +S++ L ++KILK +R +GAL L + + F D E
Sbjct: 606 ----------PTQTGE-----IAKSLRHLNRLAKILKKRRMDNGALVLASPEIRFQVDSE 650
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P + D N + EEFMLLAN T A+ IA F + A+LRRHP P
Sbjct: 651 THEPLEVEAKQMRDTNSMVEEFMLLANITVAQHIADEFTECAVLRRHPKPPSTNFDPLVK 710
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKD 823
G ++ T S + SL++ +K D F+ +I TR M A YF SG +
Sbjct: 711 AARYQGFEVVTDSGLELAHSLDKC---VKADNPYFNTMIRILTTRCMMQAVYFISGSLQK 767
Query: 824 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
+ ++ HY LA +YTHFTSP+RRY D++VHR L A++ A+ Y
Sbjct: 768 E-EFFHYGLAADIYTHFTSPIRRYSDIMVHRLLAASIGADSTY 809
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%)
Query: 160 FAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEGD 219
F PH SM+A+ E L + + + N LE +EG +T +LI G + NRAVEGD
Sbjct: 232 FPPHLSMKALLEGLRLKKLLQGSFHASRENYLEGSVSVEGYETGILIQGRDSLNRAVEGD 291
Query: 220 FVLIKVDRLSLWA 232
V +++ S W+
Sbjct: 292 LVAVELLPESEWS 304
>gi|126277456|ref|XP_001375995.1| PREDICTED: DIS3-like exonuclease 1-like [Monodelphis domestica]
Length = 1055
Score = 273 bits (697), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 181/518 (34%), Positives = 278/518 (53%), Gaps = 38/518 (7%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 330 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 372
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK I+ ++ +A + +V RID W S +P H + V GR G++
Sbjct: 373 RIPK-----------IRISTQQAEALQDFRVVV-RIDSWESTSVYPNGHFVRVLGRIGDL 420
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLR-NFCIFTIDPS 523
E +I IL EN+I + FS + +P PW+V EE R DLR +F+IDP
Sbjct: 421 EGEIATILVENSISVAPFSEAQMCEMPVNTPENPWKVNPEEERERIDLRKTHLVFSIDPK 480
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
D+DDALS+ L++G +GVHIADV++FV + DIEA+ R+T+ Y+ R+ MLP
Sbjct: 481 GCEDVDDALSVRTLNNGNLELGVHIADVTHFVTTNSYSDIEARTRATTYYLADRRYDMLP 540
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLN-SAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
+LS ++ SL GVDR A S+ W+L+ ++ ++ W GRT+++S KL YE AQD++DG
Sbjct: 541 SILSADLCSLLGGVDRYAVSVMWELDKNSFEIKKVWYGRTILQSAYKLYYEAAQDLLDGN 600
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
V + + + ++V +I L ++++ ++ KR + GAL LE +
Sbjct: 601 VSVVDDIPEFREMDEKSRRAKRDELVWAIGKLTDIARHVRAKRDSCGALELEGVEVRVQL 660
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
D+ +D + +++ E M+LAN A+ I FP ALLR+HP P+ E
Sbjct: 661 DDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWENFPHQALLRQHPPPHQEFFSEL 720
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
G +DT S+ SL+ A + D ++ IL + AT+ M A YF +G
Sbjct: 721 RECAKAKGFSMDTRSNKTLADSLDHAND--PRDPLVNRILRSMATQAMSNAVYFSTGSCA 778
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
+D ++ HY LA YTHFTSP+RRY D+VVHR L AA+
Sbjct: 779 ED-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAI 815
Score = 43.1 bits (100), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 158 KIFAPHWSMEAVNEALEKGDAFKALYRVNAHN-RLEAYCKIEGVQT-------DVLITGI 209
K + H +E + ++ G + + VN H ++EA+ +++G + D+L+ G+
Sbjct: 223 KEYPEHLPLEVLEAGIKSGRYIQGILNVNKHRAQIEAFVRLQGASSKDSDLISDILVHGM 282
Query: 210 AAQNRAVEGDFVLIKV 225
A+NR++ GD V++++
Sbjct: 283 KARNRSIHGDVVVVEL 298
>gi|407424877|gb|EKF39174.1| mitochondrial exoribonuclease DSS-1, putative [Trypanosoma cruzi
marinkellei]
Length = 966
Score = 273 bits (697), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 187/526 (35%), Positives = 269/526 (51%), Gaps = 54/526 (10%)
Query: 349 PTGRVVSI--IERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 406
P GRVV I +ER P G ++V + +R A + + S +V + P
Sbjct: 328 PVGRVVGITSMERRP----FCGSIDVEEL------TRLMASEGKISGAVS----VLFQPK 373
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 466
+ P++ + + L D KRL + ID+W E + FP H + V G G
Sbjct: 374 DNRIPRIRISTRHLEDLKDKRL------------SVIIDDWPEYNSFPVGHYVEVLGTIG 421
Query: 467 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 526
+ + + IL EN + FS CLP W V ++EL R DLR+ C+ ++DP
Sbjct: 422 DKDTEAKVILLENDVPHYDFSEAVYDCLPKGQWSVSKDELERRLDLRDLCVVSVDPLGCR 481
Query: 527 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 586
D+DDAL +++ VGVHIADV++F+ TA+D EA RSTSVY++ R+I MLP LL
Sbjct: 482 DIDDALHCRVVNENHLEVGVHIADVTHFLHENTAMDEEAAKRSTSVYLVDRRINMLPQLL 541
Query: 587 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 646
+E + S+ DR AFSI W+ + +VV + G+TVIRS L Y AQ +ID DV
Sbjct: 542 TENLCSIVSNEDRYAFSILWEFDEEYNVVRDYFGKTVIRSRAALYYGDAQRMID---DVN 598
Query: 647 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EY 705
S++ S++ L +S+ K KR DGAL L + + F D ++
Sbjct: 599 DK----------------SEIAVSLRHLMNISRHFKAKREKDGALFLASQEFKFKVDNDH 642
Query: 706 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF-EA 764
P D + + N + EE+ML AN AA + +FP LLRRH P EA
Sbjct: 643 VNPTDMQVYQTFEANSMIEEWMLFANAAAARKVYESFPRWTLLRRHQRPAENAFDTLNEA 702
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKD 823
K GL+LD ++S + SL + D F+ LI TR ++ A YF S +
Sbjct: 703 LERKLGLRLDDTTSFTLNMSLNAC---IDPDDAYFNQLIRILVTRCLRQAQYFSSSEVSQ 759
Query: 824 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKH 869
D ++ H+ LA P+YTHFTSP+RRY D++VHR L AAL ++ KH
Sbjct: 760 D-EFYHFGLAMPIYTHFTSPIRRYADVIVHRQLAAALGIMQVSEKH 804
>gi|71755823|ref|XP_828826.1| exosome complex exonuclease RRP44p-like protein [Trypanosoma
brucei]
gi|70834212|gb|EAN79714.1| exosome complex exonuclease RRP44p homologue [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 972
Score = 273 bits (697), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 169/420 (40%), Positives = 232/420 (55%), Gaps = 26/420 (6%)
Query: 444 IDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQ 503
ID+W E S FP H + V G G+ + + IL EN I FS CLP W V +
Sbjct: 426 IDDWGEHSSFPVGHYVEVLGTIGDKDTEAKVILLENDIPHYDFSEAVYDCLPKGEWNVTE 485
Query: 504 EELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDI 563
EEL +R DLR+ C+ ++DP D+DDAL R++ VGVHIADV++F+ GTA+D
Sbjct: 486 EELGNRLDLRDLCVVSVDPLGCRDIDDALHCRRVNGNHLEVGVHIADVTHFLKEGTAMDE 545
Query: 564 EAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTV 623
EA RSTSVY++ R+I MLP LL+E + S+ DR AFSI W+ + VV + G+TV
Sbjct: 546 EAAKRSTSVYLVDRRINMLPQLLTENLCSIVADEDRYAFSIMWEFDENYSVVREFFGKTV 605
Query: 624 IRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKD 683
IRS L Y AQ +ID D S+ S++ L ++S+ +
Sbjct: 606 IRSRAALYYGDAQRMIDDPED-------------------ESEAAVSLRYLMQLSRHFRK 646
Query: 684 KRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAF 742
+R DGAL L + + F D ++ P D D N + EE+ML AN AA + +F
Sbjct: 647 RREKDGALFLCSQEFKFKVDNDHVNPTDMQAYQTFDSNSMIEEWMLFANAAAARRVYASF 706
Query: 743 PDSALLRRHPAPNMRKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDI 801
P LLRRH AP EA K GL+LD ++S ++SLE+ + D Y F+
Sbjct: 707 PRWTLLRRHQAPAENAFDTLNEAIRRKIGLKLDDTTSLALNESLEKCVDP-SDPY--FNR 763
Query: 802 LI-NYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
LI TR ++ A YF S + D ++ H+ LA P+YTHFTSP+RRY D++VHR L AAL
Sbjct: 764 LIRTLVTRCLRQAQYFSSSEVSKD-EFHHFGLAMPIYTHFTSPIRRYADVIVHRQLAAAL 822
>gi|291402815|ref|XP_002718229.1| PREDICTED: DIS3-like exonuclease 1-like [Oryctolagus cuniculus]
Length = 1023
Score = 272 bits (695), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 183/535 (34%), Positives = 277/535 (51%), Gaps = 39/535 (7%)
Query: 336 RLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSV 395
R+ A Y PTG VV I ++ +RD IV F + Y ++K + L+V
Sbjct: 302 RMGADHEGYSEYVPTGHVVGITQKH-KRDYIVTFPSKEDILYY-------SRKTKKYLAV 353
Query: 396 PDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQ 455
P +Y + P++ + K ++ + A I ID W+ +S +P
Sbjct: 354 P-WDY--------RIPRIRISRKQ-----AEKYQFCRAIIH-------IDSWDTDSRYPD 392
Query: 456 AHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC----VPWEVPQEELLSRKD 511
HV+ G GG++E ++ ++L E+ I FS + LP PW V EE RKD
Sbjct: 393 GHVVGTLGTGGDLEGEMKSLLMEHDISERPFSEAQMGELPVNTAEKPWSVDHEEQ-DRKD 451
Query: 512 LR-NFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRST 570
LR +FTIDP D+DDALS+ LS G +GVHIADV+YFV P + LD EA+ R+T
Sbjct: 452 LRKTHLVFTIDPKGCEDVDDALSVRTLSSGNLELGVHIADVTYFVKPKSHLDKEARARAT 511
Query: 571 SVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLN-SAGDVVDRWIGRTVIRSCCK 629
+ Y+ R+ MLP +LS + SL GVDR A S+ W+L+ + ++ W GR++I S +
Sbjct: 512 TYYLPDRRYDMLPSVLSSNLCSLLRGVDRYAMSVIWELDMTTYEIKKVWYGRSIIHSTYQ 571
Query: 630 LSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDG 689
LSYE AQ+++DG + + + + + ++ +I+ L +++ + +R DG
Sbjct: 572 LSYEAAQELLDGNLSITGNIEEFQDMEEKEKEDRLQELTWAIEKLADIASHFRAQRGLDG 631
Query: 690 ALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLR 749
AL L+ + L DE D V + ++ + E M+LAN A I +FP ALLR
Sbjct: 632 ALDLDGIEISVLLDEEKNILDLVPRQQRRIHRMVAECMILANHWVARKIYESFPRQALLR 691
Query: 750 RHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRP 809
RHP P E + G +DTSS+ SL+ A + D ++ +L N AT
Sbjct: 692 RHPPPRQNLFSELKQSAKAGGFHIDTSSNRALALSLDNAYD--VSDPMVNKLLRNMATLA 749
Query: 810 MQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
M A YF +G + + ++ HY L YTHFTSP+RRY D++VHR L AA+ +K
Sbjct: 750 MSNALYFSTGSCR-EREFHHYGLGLDKYTHFTSPIRRYADIIVHRLLIAAIAEDK 803
Score = 44.3 bits (103), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 172 ALEKGDAFKALYRVNAHNRLEAYCKIEGVQT-----DVLITGIAAQNRAVEGDFVLIKVD 226
L+ G + + VN H ++EA+ +++ ++LI GI +NRA+ GD V +K+
Sbjct: 235 GLKSGRYVEGILYVNKHTKMEAFVRVQDTDQSEEDYEILIDGINPRNRALHGDRVAVKMF 294
Query: 227 RLSLWAKMKG 236
SLW + G
Sbjct: 295 PESLWKRRMG 304
>gi|296816335|ref|XP_002848504.1| mitotic control protein dis3 [Arthroderma otae CBS 113480]
gi|238838957|gb|EEQ28619.1| mitotic control protein dis3 [Arthroderma otae CBS 113480]
Length = 1044
Score = 272 bits (695), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 211/719 (29%), Positives = 325/719 (45%), Gaps = 132/719 (18%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
++ ++SM + + G + ++ V+ +N LE + +LI G NRA+ G
Sbjct: 255 LYPAYYSMSKIMTLIRAGTLHQGVFNVSPYNYLEGSVNVPAFDKSLLILGRDNSNRAIAG 314
Query: 219 DFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCTL 278
D V+++V LP + ++ + +
Sbjct: 315 DIVVVEV-----------------------LPKD-----------------QWKTPSSKI 334
Query: 279 LSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLS 338
+ E+ + DD+ +E + ERE + D K +
Sbjct: 335 IDEEALTKDDNPEAEENEAVVTERE--------RKALQDEVRKAHGTG------------ 374
Query: 339 AMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDR 398
S P +PT +VV II+R+ R+ VG ++ + R+ +
Sbjct: 375 --TESRP--QPTAKVVGIIKRNWRQ--YVGHIDGSSSSQASSAGRR-------------Q 415
Query: 399 EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHV 458
+ + + P + PK+ + + + + +R + ID W+ +S +P H
Sbjct: 416 QTVFVIPMDKRVPKIRIRTRQANELMGQR------------ILITIDAWDRDSRYPMGHF 463
Query: 459 LHVFG----RGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEE----LLS 508
+ G +G E E A+L E + F L CLP W+VP++
Sbjct: 464 VRSLGEVETKGAETE----ALLLEYDVQYRPFPQTVLDCLPAEGHDWKVPKDMSDPGWKD 519
Query: 509 RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVR 568
R+DLR+ + +IDP D+DDAL L +G VGVHIADVS FV P A+D EA +R
Sbjct: 520 RRDLRDLLVCSIDPPGCQDIDDALHSRPLPNGNFEVGVHIADVSNFVRPNNAMDTEASMR 579
Query: 569 STSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCC 628
T+VY++ ++I MLP+LL ++ SL P V+R AFS+ W++ + ++V ++VI S
Sbjct: 580 GTTVYLVDKRIDMLPMLLGTDLCSLKPHVERFAFSVLWEVTADAEIVSSSFTKSVIFSRE 639
Query: 629 KLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTD 688
SYE AQ ID + + D+ S+++L +SK+L+ KR
Sbjct: 640 AFSYEQAQLRIDDRSKTD-------------------DLTESMRTLLRLSKLLRQKRMDA 680
Query: 689 GALRLENSKPVFLFD-EYGTPYDSVLS-GREDLNFLFEEFMLLANKTAAEVIARAFPDSA 746
GAL L + + D E P V + D N L EEFMLLAN + A I +FP +A
Sbjct: 681 GALNLASPEVRIETDSELSDPVADVKTKALLDTNSLVEEFMLLANISVAARIYESFPQTA 740
Query: 747 LLRRHPAPNMRKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN- 804
LLRRH P E K L LD SSS SL++ + + F+ LI
Sbjct: 741 LLRRHATPPPSNFEELITQLSKKRNLTLDVSSSLALANSLDKC---VDERNPFFNTLIRI 797
Query: 805 YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE 863
ATR M A YFC+G ++++ HY LA P+YTHFTSP+RRY DLVVHR L AA+ E
Sbjct: 798 LATRCMTSAEYFCAG-AHSESEFRHYGLASPIYTHFTSPIRRYADLVVHRQLAAAIGYE 855
>gi|157871524|ref|XP_001684311.1| putative rrp44p homologue [Leishmania major strain Friedlin]
gi|68127380|emb|CAJ04861.1| putative rrp44p homologue [Leishmania major strain Friedlin]
Length = 920
Score = 272 bits (695), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 186/524 (35%), Positives = 269/524 (51%), Gaps = 53/524 (10%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTG+VV ++ S R G L+ G + K N S D I P +
Sbjct: 264 PTGKVVGLL--SSNRRPFCGSLD--------EGELEQVKANMS-----DNVSILFQPKNN 308
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ P++ + + + D + KRL + ID+W S FP H + V G+ G+
Sbjct: 309 RIPRIRISTRHVQDLMDKRL------------SVVIDDWPLYSSFPVGHYVEVLGKIGDR 356
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDL 528
+ + IL E+ + FS CLP W V ++E R DLR+ CI ++DP D+
Sbjct: 357 DTEAMVILLEHDVPHYDFSEAVHDCLPKGQWSVTKDEEARRLDLRDLCIVSVDPLGCRDI 416
Query: 529 DDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSE 588
DDAL ++ VGVHIADV++F+ GTA+D EA RSTSVY++ R+I MLP LL+E
Sbjct: 417 DDALHCRVVNGNHLEVGVHIADVTHFLHEGTAMDDEAAKRSTSVYLVDRRINMLPQLLTE 476
Query: 589 EVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESS 648
+ SL DR AFSI W+ + +VV W G+T+IRS L Y AQ +ID D
Sbjct: 477 NLCSLVEAEDRYAFSILWEFDENLNVVRDWFGKTIIRSRGALYYGDAQRMIDNPADT--- 533
Query: 649 NTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGT 707
SD+ S++ L +SK K +R DGAL L + + F D E+
Sbjct: 534 ----------------SDIAVSLRELMRLSKHFKAQREEDGALFLASQEFKFKVDNEHVN 577
Query: 708 PYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF-EAFC 766
P D + + N + EE+ML AN A + ++P LLRRH P +A
Sbjct: 578 PTDMQVYQTFEANSMIEEWMLYANAAVATKVYESYPQWTLLRRHEPPAEGAFDTLNDALY 637
Query: 767 SKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDT 825
SK ++LD ++S ++SL++ E +D Y F+ LI TR ++ A YF SG D
Sbjct: 638 SKLRVRLDDTTSLTLNKSLDKC-EDPQDPY--FNKLIRILTTRCLRQAQYFSSGGIPKD- 693
Query: 826 DWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKH 869
++ H+ LA P+YTHFTSP+RRY D++VHR L AA+ E + +H
Sbjct: 694 EFYHFGLAMPIYTHFTSPIRRYADVLVHRQLAAAIGIESISEQH 737
>gi|351695548|gb|EHA98466.1| DIS3-like exonuclease 1 [Heterocephalus glaber]
Length = 971
Score = 271 bits (694), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 184/530 (34%), Positives = 277/530 (52%), Gaps = 54/530 (10%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTGRVV I++++ RD +V F P +E +Q +P
Sbjct: 247 PTGRVVGILQKN-WRDYVVTF--------------------------PSKEEVQSQGRNP 279
Query: 409 KYPKMVVLVKD--LPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ K++V D +P K R+ A T++ V RID W S +P H + V GR
Sbjct: 280 Q--KILVTPWDYRIP---KIRISTQQAETLQDFRVIVRIDSWESTSVYPNGHFVCVLGRI 334
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPC----VPWEVPQEELLSRKDLR-NFCIFTI 520
G++E +I IL EN+I FS L +P PW+V EE R+DLR +F+I
Sbjct: 335 GDLEGEIATILVENSISVVPFSEAQLCEMPVNTPEKPWKVSPEEERKRRDLRRTHLVFSI 394
Query: 521 DPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIP 580
DP D+DDALS+ L++G +GVHIADV++FV + D+EA+ R+T+ Y+ R+
Sbjct: 395 DPKGCEDVDDALSVRTLNNGNLELGVHIADVTHFVALNSYTDVEARTRATTYYLADRRYD 454
Query: 581 MLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDII 639
MLP +LS ++ SL GVDR A S+ W+L+ A ++ W GRT+IRS KL YE AQ+++
Sbjct: 455 MLPSVLSADLCSLLGGVDRYAVSVTWELDKASYEIKKVWYGRTIIRSAYKLFYEAAQELL 514
Query: 640 DGKFDV-----ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLE 694
G F + E N+ +G + W +I L ++++ ++ +R GAL LE
Sbjct: 515 HGNFGIADEIPEFKNSDEKGRQARLEELAW-----AIGKLTDIARHVRARRNRCGALELE 569
Query: 695 NSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAP 754
+ D+ +D + +++ E M+LAN A I +FP ALLR+HP P
Sbjct: 570 GVEIRVQLDDKKNIHDLIPKQPLEVHETVAECMILANHWVARKIWESFPHQALLRQHPPP 629
Query: 755 NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLAS 814
+ E G +DT S+ SL++A + D ++ +L + AT+ M A
Sbjct: 630 HQEFFAELRECARAKGFCIDTRSNKTLADSLDKAED--PSDPIVNQLLRSMATQAMSNAL 687
Query: 815 YFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
YF +G + ++ HY LA YTHFTSP+RRY D+VVHR L AA+ +K
Sbjct: 688 YFSTGSCT-EKEFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDK 736
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 57/119 (47%), Gaps = 10/119 (8%)
Query: 144 NKDDNPSHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHN-RLEAYCKIEG--- 199
++ + S E+ + ++ H +E + ++ G + VN H + EA+ +++G
Sbjct: 126 SRRERESESQESHGREYSEHLPLEVLEAGIKSGRYVQGTLNVNKHRAQTEAFVRLQGASS 185
Query: 200 ----VQTDVLITGIAAQNRAVEGDFVLIKVDRLSLWAKMKGF--SNNSSIVEDSNLPTE 252
+ +D+LI G A+NRA+ GD V++++ W G N+S S P+E
Sbjct: 186 KDSGLTSDILIHGTKARNRAIHGDVVVVELLPKGEWKGRTGALCDNDSEDKTSSEAPSE 244
>gi|363737633|ref|XP_003641875.1| PREDICTED: DIS3-like exonuclease 1-like [Gallus gallus]
Length = 1054
Score = 271 bits (694), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 178/517 (34%), Positives = 280/517 (54%), Gaps = 38/517 (7%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTG+VV II+++ RD +V F SR++ + + + I +TP
Sbjct: 327 PTGKVVGIIQKN-WRDYVVTF-----------PSREECQSQGR-----NAQKILVTPWDY 369
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK I+ ++ +A E +V RID W S +P H + V GR G++
Sbjct: 370 RIPK-----------IRISTQQAEALQEYRVVV-RIDSWESTSVYPNGHFVRVLGRIGDL 417
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLRN-FCIFTIDPS 523
E +I AIL EN+I + FS ++ +P PW+V EE R +LR+ IF+IDP
Sbjct: 418 EGEIAAILVENSITVAPFSEIQMNEMPVSSSKNPWKVNPEEEKKRLNLRDTHLIFSIDPK 477
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
D+DDALS+ L +G +GVHIADV+YFV + DIEA+ R+T+ Y+ R+ MLP
Sbjct: 478 GCEDVDDALSVRTLPNGNLELGVHIADVTYFVAANSYTDIEARARATTYYLADRRYDMLP 537
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
+LS ++ SL GVDR A S+ W+L +++ +++IRS KL YE AQ ++DG
Sbjct: 538 SVLSADICSLLSGVDRYAVSVLWELERESYEILRVCYNKSIIRSAYKLVYEVAQGLLDGD 597
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
V + + + + S++V +I L ++++ ++ KR + GAL LE +
Sbjct: 598 TSVVDDILELKDLDERTREKKLSELVWAISKLTDIARHIRAKRDSCGALELEGVEIRVQL 657
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
D+ +D + +++ E M+LAN A+ I+ +FP ALLR+HP P +
Sbjct: 658 DDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKISESFPHQALLRQHPPPRQEFFTDL 717
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
+ S G +DT S+ +SL++A + L D ++ +L + AT+ M A YF +G
Sbjct: 718 QECASAKGFAIDTRSNKALAESLDKADDPL--DPIVNKLLRSMATQAMSNALYFSTGSCS 775
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAA 859
++ ++ HY LA YTHFTSP+RRY D++VHR L AA
Sbjct: 776 EE-EFHHYGLALDKYTHFTSPIRRYADIIVHRLLMAA 811
Score = 46.6 bits (109), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 8/76 (10%)
Query: 158 KIFAPHWSMEAVNEALEKGDAFKALYRVNAHN-RLEAYCKIEG-------VQTDVLITGI 209
K + H ME + ++ G + VN H +LEA+ +++G +Q+D+LI G
Sbjct: 220 KEYPEHLPMEVLEAGIKSGRYIQGALNVNKHRAQLEAFVRLQGFGSKETELQSDILIYGA 279
Query: 210 AAQNRAVEGDFVLIKV 225
A+NRA+ GD V +++
Sbjct: 280 KARNRAIHGDVVAVEL 295
>gi|326482722|gb|EGE06732.1| mitotic control protein dis3 [Trichophyton equinum CBS 127.97]
Length = 1044
Score = 271 bits (694), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 214/721 (29%), Positives = 326/721 (45%), Gaps = 136/721 (18%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
+++ ++SM + + G + ++ V+ +N LE + + +LI G NRA+ G
Sbjct: 255 LYSAYYSMSKIMTLVRAGTLHQGIFNVSPYNYLEGSVNVPAFEKSLLILGRDNSNRAISG 314
Query: 219 DFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCTL 278
D V+++V LP + ++ + +
Sbjct: 315 DVVVVEV-----------------------LPKD-----------------QWKTPSSKI 334
Query: 279 LSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLS 338
+ E+ + DD+ +E + ERE + TE
Sbjct: 335 IDEEALTKDDNPEAEENEAVVTERERKALQEEVRKAHGTGTE------------------ 376
Query: 339 AMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDR 398
S P +PT +VV II+R+ R+ VG ++ + R+ +
Sbjct: 377 ----SRP--QPTAKVVGIIKRNWRQ--YVGHIDGSSSSQASSAGRR-------------Q 415
Query: 399 EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHV 458
+ + + P + PK+ + + + + +R + ID W+ +S +P H
Sbjct: 416 QTVFVIPMDKRVPKIRIRTRQANELMGQR------------ILITIDAWDRDSRYPVGHF 463
Query: 459 LHVFG----RGGEVEPQINAILYENAICCSGFSPESLSCLP--CVPWEVPQEE----LLS 508
+ G +G E E A+L E + F L CLP W+VP++
Sbjct: 464 VRSLGEVETKGAETE----ALLLEYDVQYRPFPQTVLDCLPPEGHDWKVPKDMSDPGWKD 519
Query: 509 RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVR 568
RKDLR+ + +IDP + D+DDAL L +G VGVHIADVS FV P A+D EA +R
Sbjct: 520 RKDLRDLLVCSIDPPSCQDIDDALHSRPLPNGNFEVGVHIADVSNFVRPNNAMDTEASMR 579
Query: 569 STSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCC 628
T+VY++ ++I MLP+LL ++ SL P V+R AFS+ W++ +VV ++VI S
Sbjct: 580 GTTVYLVDKRIDMLPMLLGTDLCSLKPHVERYAFSVLWEITPDAEVVSSSFTKSVIFSRE 639
Query: 629 KLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTD 688
SYE AQ ID Q + D+ S+++L +SK+L+ KR
Sbjct: 640 AFSYEQAQLRID-------------------DQSKTDDLTTSMRTLLRLSKLLRQKRMDA 680
Query: 689 GALRLENSKPVFLFDEYGTPYDSVLSGRE----DLNFLFEEFMLLANKTAAEVIARAFPD 744
GAL L + P + DSV + D N L EEFMLLAN + A I +FP
Sbjct: 681 GALNL--ASPEVRIETDSELSDSVADVKTKALLDTNSLVEEFMLLANISVAARIYESFPQ 738
Query: 745 SALLRRHPAPNMRKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILI 803
+ALLRRH P E K L LD SSS SL++ + + F+ LI
Sbjct: 739 TALLRRHATPPPSNFEELITQLSKKRNLTLDVSSSLALANSLDKC---VDERNPFFNTLI 795
Query: 804 N-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEA 862
ATR M A YFC+G ++++ HY LA P+YTHFTSP+RRY DLVVHR L AA+
Sbjct: 796 RILATRCMTSAEYFCAGAHS-ESEFRHYGLASPIYTHFTSPIRRYADLVVHRQLAAAIGY 854
Query: 863 E 863
E
Sbjct: 855 E 855
>gi|392563157|gb|EIW56336.1| RNB-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 990
Score = 271 bits (694), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 188/536 (35%), Positives = 270/536 (50%), Gaps = 69/536 (12%)
Query: 346 TKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNY--KGGSRKDAKKNRSSLSVPDREYIQL 403
+K+PTGRVV I++R+ W +Y S N +SLS ++ +
Sbjct: 372 SKQPTGRVVGIVKRN--------------WRSYVCHIDSTSLTSTNPTSLS---QQTVFA 414
Query: 404 TPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG 463
TP P++ + + P I ++ + ID W S +P+ H + G
Sbjct: 415 TPVSRLLPRIRLRTRQAPALIGQK------------ILVTIDRWERTSRYPEGHFVRALG 462
Query: 464 RGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEELLS-----RKDLRNFC 516
+ E + ++L E + F L CLP W VP + R+DLR+
Sbjct: 463 KVQSKEAEQESLLLEFDVPYRPFGKAILDCLPPEGDSWVVPPKAAADPNWRDREDLRDLI 522
Query: 517 IFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQ 576
I +IDP D+DDAL RL +G GVHIADVS+FVLP T +D EA R T+VY++
Sbjct: 523 ICSIDPPGCQDIDDALHARRLPNGNIEAGVHIADVSHFVLPDTPMDNEAAARGTTVYLVD 582
Query: 577 RKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQ 636
++I MLP LL + SL P V+RLAFS+ W+L+ A ++V+ ++VI S +YE AQ
Sbjct: 583 KRIDMLPALLGTNLCSLRPHVERLAFSVIWELSPAAEIVNVRFTKSVIASKSAFTYEEAQ 642
Query: 637 DIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENS 696
D D + ++ L E SI+ L ++S+ L+ R GAL L +
Sbjct: 643 IRKD---DPKQTDELTE----------------SIRLLNDLSRKLRQGRMDAGALNLASP 683
Query: 697 KPVFLFD--EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH--- 751
+ D E P D + + N L EEFMLLAN + A I FP +A+LRRH
Sbjct: 684 EVKIHLDSSESSDPIDVEQKEQRETNSLVEEFMLLANISVAGKIQETFPQTAVLRRHLPP 743
Query: 752 PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPM 810
P N KL++ + G+ LD SSSG SL++ + + F+ L+ ATR M
Sbjct: 744 PRTNFEKLQDI--LKKRRGMSLDVSSSGALAASLDECVDPTEP---AFNTLVRIMATRCM 798
Query: 811 QLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
A YFCSG DT +GHY LA P+YTHFTSP+RRY D++ HR L+AA+ L+
Sbjct: 799 LSAEYFCSGSVGRDT-FGHYGLASPIYTHFTSPIRRYADVLAHRQLSAAIGYTSLH 853
>gi|443726110|gb|ELU13403.1| hypothetical protein CAPTEDRAFT_108980 [Capitella teleta]
Length = 998
Score = 271 bits (694), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 175/526 (33%), Positives = 270/526 (51%), Gaps = 53/526 (10%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTGRVV +++R +W +Y D +K R + + P
Sbjct: 324 PTGRVVGVLQR--------------RWRDYVASFEVDNQKRRVG-------KVLVVPMDW 362
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK I+ + +A + + R+D W S +P H + G G+V
Sbjct: 363 RIPK-----------IRISTTQAEA-LRSHRIIVRLDNWEVGSQYPNGHFVRSLGPAGQV 410
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLR-NFCIFTIDPS 523
E +I+AIL E+ + F+ +S +P PW + + E+ +R+DLR + +F+IDP
Sbjct: 411 ETEISAILIEHNLQVPPFADGLMSEMPVNTDSNPWVMAESEVKTRRDLRQSHLVFSIDPK 470
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
D+DDALSI LS+G +GVHIADV++FV + D+EA+ R+T+VY+ R+ MLP
Sbjct: 471 GCEDVDDALSIRHLSNGKMELGVHIADVTHFVAANSLTDLEAKQRATTVYLADRRYDMLP 530
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKF 643
+LS ++ SL GVDR A S+ W L+ V+D W GRTVI S KL YE AQ I DG
Sbjct: 531 AVLSADLCSLLSGVDRYAVSVIWTLDQDCQVLDVWYGRTVIHSSYKLFYEMAQSIHDGAA 590
Query: 644 DVESSNTLGEGWPQL-----YGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKP 698
D E + E P+L + + + S++ ++ SL ++ ++ +R GAL+LE +
Sbjct: 591 DEE----IIENVPELQNNPDHLKKKISELRSAVNSLMSTARKIQARRTRQGALQLEGVEV 646
Query: 699 VFLFDEYGTPY---DSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPN 755
D+ D + +++ E M+ AN A+ I +P+ ALLR HP P
Sbjct: 647 QVQIDKTSAQQNITDVIPKEALEIHETIAECMIFANHWVAKKICETYPNQALLRHHPLPR 706
Query: 756 MRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASY 815
++ S G ++T+ + +SL+ R + D +L + AT+ M ASY
Sbjct: 707 QEDFGRLQSCASVRGFSINTTDNKTLAESLD--RCVIDGDATFNKLLRSLATQAMSNASY 764
Query: 816 FCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 861
F +G D + HY LA P YTHFTSP+RRY D++VHR L AA++
Sbjct: 765 FSTGALARD-QFFHYGLALPYYTHFTSPIRRYADILVHRQLLAAVK 809
Score = 45.1 bits (105), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 163 HWSMEAVNEALEKGDAFKALYRVNAHNRL-EAYCKIEG-----VQTDVLITGIAAQNRAV 216
+ S EA+ ++ G + VN HN + EA+ + G +Q DVL+ G +A+NRA+
Sbjct: 230 YLSSEAIQSGIKTGILVQGTLNVNKHNAMHEAFVRPSGASNRALQEDVLLVGSSARNRAI 289
Query: 217 EGDFVLIKVDRLSLW 231
GD V+ ++ LW
Sbjct: 290 HGDLVVTELLPKHLW 304
>gi|198462657|ref|XP_001352503.2| GA14227 [Drosophila pseudoobscura pseudoobscura]
gi|198150922|gb|EAL30000.2| GA14227 [Drosophila pseudoobscura pseudoobscura]
Length = 1112
Score = 271 bits (694), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 159/411 (38%), Positives = 228/411 (55%), Gaps = 13/411 (3%)
Query: 456 AHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVP---QEELLSRKDL 512
A ++ GR G + +I AI+ N + S P ++P ++L R+DL
Sbjct: 492 AELIQPVGRIGNLPDEIKAIMIHNNL--SDIKPFEQRFNDMFVNQIPPGSTKDLDKRQDL 549
Query: 513 RNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSV 572
R CIFTIDP TA DLDDA+SIE+L D +GVHI+DVS+++ + LD + RSTS+
Sbjct: 550 RKKCIFTIDPLTARDLDDAVSIEQLGDNEYEIGVHISDVSHYLEEDSELDNIVKERSTSI 609
Query: 573 YMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR--WIGRTVIRSCCKL 630
Y+ I MLP L SL PG D+LAFS+FW ++ G + RT+IRSC +
Sbjct: 610 YLANEVIHMLPQTLCMRC-SLLPGEDKLAFSVFWRMDRNGVQLQEKPRFTRTIIRSCTQF 668
Query: 631 SYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGA 690
+YEHAQ IID + + + +P + F+ SDVV+ + L ++ L+ R+ G+
Sbjct: 669 AYEHAQKIIDNPHERFTEH----DFPTVLNGFQASDVVKRVLCLNGIASSLRKARYEKGS 724
Query: 691 LRLENSKPVFLFDEY-GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLR 749
+ N K F+ D G P D + + + N + EE+MLLAN+ A I AFP+ A+LR
Sbjct: 725 ISFNNPKLRFVLDPISGEPEDFEVEMQREANRMIEEYMLLANQAVARFIYDAFPEIAVLR 784
Query: 750 RHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRP 809
HP P M+ L+ G LD SSS QS+ + ++ + + L +P
Sbjct: 785 NHPPPLMKSLKALREKFQTLGFNLDYSSSKALQQSIIRMCQEAPNPLAMSFCLSRLLMKP 844
Query: 810 MQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
M A+YFCS + D HYAL+ P+YTHFTSP+RRYPD++VHR L AAL
Sbjct: 845 MARANYFCSEGRTEPADLWHYALSIPIYTHFTSPIRRYPDVMVHRLLAAAL 895
>gi|407926199|gb|EKG19168.1| Ribonuclease II/R [Macrophomina phaseolina MS6]
Length = 1041
Score = 271 bits (694), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 188/531 (35%), Positives = 264/531 (49%), Gaps = 67/531 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 407
+PT RVV I++R+ W Y G +D+ K+ + S ++ + L P
Sbjct: 434 QPTARVVGIVKRN--------------WRQYVGHVDRDSVKSTAKQS-RTQQTVFLIPMD 478
Query: 408 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG---- 463
+ PK+ V + + + KR + ID WN ES +P H + G
Sbjct: 479 KRIPKIRVRTRQAGEMLGKR------------ILVTIDSWNRESRYPMGHFVRSLGELES 526
Query: 464 RGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEE----LLSRKDLRNFCI 517
+G E E A+L E + F L CLP W VP+ + R+DLR+ +
Sbjct: 527 KGAETE----ALLLEYDVQYRPFPKAVLDCLPPEGHDWRVPESKDDPGWKGRRDLRDLLV 582
Query: 518 FTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 577
+IDP D+DDAL + L +G +VGVHIADVS+FV P A+D EA +R T+VY++ +
Sbjct: 583 CSIDPPGCVDIDDALHAQPLPNGNFQVGVHIADVSHFVKPNNAMDKEASMRGTTVYLVDK 642
Query: 578 KIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQD 637
+I MLP+LL ++ SL P V+R AFS+ W++ ++V ++VIRS SYE AQ
Sbjct: 643 RIDMLPMLLGTDLCSLKPYVERYAFSVLWEITPDAEIVSADFSKSVIRSREAFSYEQAQL 702
Query: 638 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 697
ID Q + ++ + +++L +SK L+ KR+ GAL L + +
Sbjct: 703 RID-------------------DQSQQDELTQGMRTLLMLSKKLRQKRYDAGALNLASPE 743
Query: 698 -PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNM 756
V E P D D N L EEFMLLAN T A AFP +ALLRRH AP
Sbjct: 744 VKVQTESETSDPIDVQTKRLLDTNSLVEEFMLLANITVARKNYEAFPQTALLRRHAAPPK 803
Query: 757 RKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLAS 814
E K GL+L SS SL+ L + F+ L+ ATR M A
Sbjct: 804 NNFEELANQLKVKKGLELRVDSSKALADSLDTC---LDPNEPFFNTLVRIMATRCMMSAE 860
Query: 815 YFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 865
YFC+G + ++ HY LA +YTHFTSP+RRY DL HR L AA+E E L
Sbjct: 861 YFCAGT-QAYPEFRHYGLASEIYTHFTSPIRRYADLEAHRQLAAAIEYEPL 910
>gi|322801672|gb|EFZ22295.1| hypothetical protein SINV_03936 [Solenopsis invicta]
Length = 894
Score = 271 bits (694), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 177/532 (33%), Positives = 275/532 (51%), Gaps = 58/532 (10%)
Query: 350 TGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPK 409
TGRVV I+E+ R VG+L K ++SL V P +
Sbjct: 271 TGRVVCILEKVHSRKA-VGYL-----------------KKQNSLFV-------FFPRDQR 305
Query: 410 YPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVE 469
P LV LP+S+ +E + + +ID W + F ++ V G+ GE++
Sbjct: 306 IP----LVDILPESVPSLYQEQPELYKNIMFRVQIDFWEQLHAF--GRIILVVGKVGEID 359
Query: 470 PQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLD 529
++ AI++EN + S + + L LP + + + ++ +R+D R CIFTIDP +A D+D
Sbjct: 360 TELKAIIFENNLDISPYHEKLLEGLPNSDYILTEADMKNREDWRRECIFTIDPPSAVDID 419
Query: 530 DALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEE 589
DA+S + L +G + VHI+DV++F+ + LD E R+T+VY+ MLP L +
Sbjct: 420 DAVSCKVLDNGNYEIAVHISDVTHFLEFFSPLDKEVLKRATTVYLPHMTSHMLPEDLC-K 478
Query: 590 VGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSN 649
+ SL PG DRLAFS+ W++ S ++V +TVIRSCC++SY+ AQ II N
Sbjct: 479 ICSLLPGKDRLAFSVIWEITSNAEIVKYRFAKTVIRSCCQMSYDAAQAII---------N 529
Query: 650 TLGEGWPQ----LYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-- 703
+ WP+ + G + S + + L+++S L+ KRF GALRL+ K D
Sbjct: 530 NPEKSWPEDFLDIKGDYTTSLLSDIVNKLFKLSTQLQKKRFAHGALRLDQPKLQICLDRT 589
Query: 704 ---EYG--TPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRK 758
E+G P + + R D N L EE MLLAN T A + P +ALLR H P+
Sbjct: 590 ISQEHGIPIPVNYYVHERNDSNSLIEELMLLANMTVATQLFITIPKTALLRIHKEPSKHC 649
Query: 759 LREFEAFCSKHGLQLDTSSSGQFHQSLEQAREK---LKDDYV--LFDILINYATRPMQLA 813
+ +G+ L+ ++G S+ + + + D+ + + ++IN ++ M A
Sbjct: 650 INTVHNMLQMYGIHLNIETAGALQASINRYESENGFITDNSMKYIMAVIINLCSKSMTRA 709
Query: 814 SYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 865
Y C+ D HYAL+ P+YTHFTSP+RRY D +VHR L+A LE + L
Sbjct: 710 EYICASTISPH-DLKHYALSVPLYTHFTSPIRRYSDCIVHRLLSATLENKPL 760
Score = 41.6 bits (96), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Query: 144 NKDDNPSHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCK-----IE 198
N N + R K+F+ + + + + L+K A + V H R+ +CK ++
Sbjct: 170 NTSGNNKIMEKPRRKLFSDYIPVSKMKKILKKPSA--NVQYVKGHIRVNPFCKYSYLRMD 227
Query: 199 GVQTDVLITGIAAQNRAVEGDFVLIKVDRLSLWAK 233
+ D+LI GI +NRA +GD V+ V+ LW +
Sbjct: 228 NEERDLLIIGIPNRNRAFDGDLVVACVNPEKLWHR 262
>gi|400598795|gb|EJP66502.1| RNB domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 989
Score = 271 bits (694), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 225/741 (30%), Positives = 331/741 (44%), Gaps = 145/741 (19%)
Query: 149 PSHQSEARCKI-------FAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQ 201
P QS+AR I + ++++ + ++ G + ++ V+ +N LE K+
Sbjct: 239 PESQSQAREVINKGSQPLYPEYFTLSRMMTGVKAGLMHQGIFNVSPYNYLEGSIKVPAFA 298
Query: 202 TDVLITGIAAQNRAVEGDFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPT--EANGMHSD 259
++I G NRAV+GD V++++ W + ++ IVE+ + +A+ D
Sbjct: 299 KPLIILGRENINRAVDGDLVVVELLPQDQWKQ-----PSTKIVEEETVTKNEDADAEQQD 353
Query: 260 ICKGKSKVDVSYEYSNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDST 319
+ K + QE ++R H S S+S
Sbjct: 354 FVSDREKKAL---------------------------QEQVKRT--------HKSGSES- 377
Query: 320 EKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYK 379
+P +PT +VV +I+R+ W Y
Sbjct: 378 ------------------------HP--QPTAKVVGVIKRN--------------WRQYV 397
Query: 380 G-----GSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDAT 434
G + K + R SV L P K PK+ + + + + + KRL
Sbjct: 398 GHIDPLSASKGPSQGRKLDSV------FLIPMDKKIPKIRLRTRQVSELLGKRL------ 445
Query: 435 IEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCL 494
LV ID W+ +S P H + G + A+L E + F L CL
Sbjct: 446 ----LVT--IDAWDRDSRHPVGHFVRSLGELETKAAETEALLLEWDVQYRPFPKTVLDCL 499
Query: 495 P--CVPWEVPQEE----LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHI 548
P W VP R+DLR I +IDP D+DDAL +L +G VGVHI
Sbjct: 500 PKEGHDWRVPTSTDDPGWRDREDLRGLLICSIDPVGCQDIDDALHARKLPNGNYEVGVHI 559
Query: 549 ADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDL 608
ADVS+FV P A+D EA VR T+VY++ ++I MLP LL ++ SL P V+R AFS+ W+L
Sbjct: 560 ADVSHFVKPANAMDAEASVRGTTVYLVDKRIDMLPPLLGTDLCSLKPYVERYAFSVLWEL 619
Query: 609 NSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVV 668
N D+V+ ++VI+S SYE AQ ID D + L +G
Sbjct: 620 NDNADIVNVRFTKSVIKSREAFSYEQAQLRID---DASQQDELTQG-------------- 662
Query: 669 RSIKSLYEVSKILKDKRFTDGALRLENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFM 727
+++L +S+ LK KR GAL L + + V + E P D D N L EEFM
Sbjct: 663 --MRTLLALSRRLKKKRMDAGALSLSSPEVKVQMESETSDPIDVKTKELLDTNSLVEEFM 720
Query: 728 LLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF-EAFCSKHGLQLDTSSSGQFHQSLE 786
L AN + A I AFP +A+LRRH AP E E K GL+L T +S SL+
Sbjct: 721 LFANISVAAKIYEAFPQTAILRRHAAPPKTNFDELAEQLRVKRGLELRTDTSKALADSLD 780
Query: 787 QAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLR 845
+ + F+ L+ ATR M A YFCSG + ++ HY LA +YTHFTSP+R
Sbjct: 781 TCTDPAEP---FFNTLVRIMATRCMMSAEYFCSGT-QSYPEFRHYGLASEIYTHFTSPIR 836
Query: 846 RYPDLVVHRTLNAALEAEKLY 866
RY DL+ HR L AA++ E ++
Sbjct: 837 RYADLLAHRQLAAAIDYEAVH 857
>gi|281208784|gb|EFA82959.1| putative exoribonuclease [Polysphondylium pallidum PN500]
Length = 954
Score = 271 bits (694), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 178/516 (34%), Positives = 257/516 (49%), Gaps = 53/516 (10%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 407
+PTGRVV II+R+ W Y G + K + +S+ ++ +
Sbjct: 344 QPTGRVVGIIKRN--------------WKPYCGAV--EFKGDINSVVTNQQQQLLFVAID 387
Query: 408 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 467
+ PK+ + + + + +R + ID W S +P H + G G+
Sbjct: 388 RRIPKIRIRSRQVSSVVGRR------------IVVAIDSWERHSRYPSGHFVKDLGPLGD 435
Query: 468 VEPQINAILYENAICCSGFSPESLSCLPC--VPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
E + +L + I F + CLP + V ++L R+DLR CIF++DP
Sbjct: 436 RETESQVLLLQFDIPHHPFGASVMKCLPPPDIMDHVSPADMLGRRDLRGECIFSVDPPGC 495
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
TD+DDAL +RL DG VGVHIADVS+FV G A+D EA R T+VY++ R+I MLP
Sbjct: 496 TDIDDALHCKRLPDGNFEVGVHIADVSHFVREGAAIDEEASHRGTTVYLVDRRIDMLPGE 555
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS + SL VDR +FS+ W ++ G+V+D +++IRS ++YE AQ K D
Sbjct: 556 LSSNLCSLMSNVDRFSFSVIWKMDPNGNVLDVEYTKSLIRSVASMTYEQAQ----IKIDD 611
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEY 705
S N + V +++ + +SK LK KRF GAL L + + F +E
Sbjct: 612 ASQNDI---------------VATNLRLMLALSKKLKSKRFDAGALILASPQVKFKTEEV 656
Query: 706 -GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
G P D L + N + EEFMLLAN A+ I + FP ALLRRHP P
Sbjct: 657 GGDPSDVELYQMRETNSMIEEFMLLANIWVAKKIHKHFPGCALLRRHPTPKASSFELLSK 716
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 824
+ G T +S +SL+ + DD +L TR M A YF SG +
Sbjct: 717 LVEQKGFDFRTDTSKLLAESLDLC--VIPDDPYFNTLLRIMTTRCMFPAQYFSSGSVPYE 774
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
++ HY LA +YTHFTSP+RRYPD++VHR L +A+
Sbjct: 775 -EYFHYGLASEIYTHFTSPIRRYPDVIVHRLLASAI 809
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Query: 146 DDNPSHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEG--VQTD 203
DD+ S+ +A+ FA H M + E L++G ++ + R + N LEA K + ++ +
Sbjct: 221 DDDHSNSVDAKKFQFAEHRPMSLLTEQLKQGQIYQGIIRTDRSNYLEALVKTDSPLMEQE 280
Query: 204 VLITGIAAQNRAVEGDFVLIKVDRLSLWAKMKG 236
+LI G+ + NRAV+GD V +++ + W++ G
Sbjct: 281 ILIQGLESMNRAVDGDIVAVELLPKAEWSRPSG 313
>gi|404449774|ref|ZP_11014762.1| RNAse R [Indibacter alkaliphilus LW1]
gi|403764621|gb|EJZ25514.1| RNAse R [Indibacter alkaliphilus LW1]
Length = 730
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 192/586 (32%), Positives = 286/586 (48%), Gaps = 83/586 (14%)
Query: 292 SEAYNQEMIEREGYNYINGHH----PSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTK 347
S + E IE E +Y+N P + E+ + D NA++ I YP+K
Sbjct: 83 SSVKDPEFIEGE-VDYVNPRFAYVVPDAKHNLEEDIQVKAADMKNALDGDRVRIMVYPSK 141
Query: 348 ----RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQL 403
R G+V+ ++ER RD VG + ++ F + VPD + +
Sbjct: 142 GRSGRLEGKVLEVVERD--RDEFVGRVEISPRF---------------AFVVPDFKKM-- 182
Query: 404 TPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG 463
+ + V DL G A ++V ++ EW + P + V G
Sbjct: 183 ------HQDIFVHKGDL----------GGAEHNQKVVV-KMTEWRDGDKNPTGKITRVLG 225
Query: 464 RGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPS 523
+ GE E +I++I+ E + G+ E +P +P++E+ R+D+R+ FTIDPS
Sbjct: 226 KAGEHEVEIHSIMAEFGLPF-GYPKEVEEEANEIPEAIPEQEISKRRDMRDIPTFTIDPS 284
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
A D DDA+S RL +G +GVHIADV++FV P T L+ EA R+TSVY++ R IPMLP
Sbjct: 285 DAKDFDDAISYRRLENGNLEIGVHIADVTHFVKPKTMLEKEAYHRATSVYLVDRTIPMLP 344
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKF 643
LS + SL P D+L FS ++++ DV++ WIGRTV S + +YE AQ+ ID +
Sbjct: 345 ERLSNGLCSLRPNEDKLTFSCVFEMDENADVLNHWIGRTVTHSDRRFAYEEAQECIDKQ- 403
Query: 644 DVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD 703
EG D + L ++K ++ +RF GA+ E + F D
Sbjct: 404 ---------EG-----------DFYSELTLLNNLAKKIRKRRFDKGAVNFETVEVKFKLD 443
Query: 704 EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVI--ARAFPDSALLRRHPAPNMRKLRE 761
E GTP ++ R+D++ L EEFMLLAN+T AE I D+ + R H P+ +L
Sbjct: 444 EKGTPLGLMIKERKDIHKLIEEFMLLANRTVAEFIFNKNKGADTFVYRIHDHPDSERLET 503
Query: 762 FEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYV---LFDILINYATRPMQLASYFCS 818
F F K G +++ + ++L KL D+ ++L A R M A Y
Sbjct: 504 FSNFAKKFGHEIEIGEGVRISKAL----NKLMDEIAGKPEQNVLEQLAIRSMAKAKYTTE 559
Query: 819 GDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
GH+ LAF YTHFTSP+RRYPD++VHR L LE K
Sbjct: 560 PK-------GHFGLAFKHYTHFTSPIRRYPDMMVHRLLQHYLEGGK 598
>gi|327302334|ref|XP_003235859.1| exosome complex exonuclease exoribonuclease [Trichophyton rubrum
CBS 118892]
gi|326461201|gb|EGD86654.1| exosome complex exonuclease exoribonuclease [Trichophyton rubrum
CBS 118892]
Length = 1044
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 213/719 (29%), Positives = 325/719 (45%), Gaps = 132/719 (18%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
+++ ++SM + + G + ++ V+ +N LE + + +LI G NRA+ G
Sbjct: 255 LYSAYYSMSKIMTLIRAGTLHQGVFNVSPYNYLEGSVNVPAFEKSLLILGRDKSNRAISG 314
Query: 219 DFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCTL 278
D V+++V LP + ++ + +
Sbjct: 315 DIVVVEV-----------------------LPKD-----------------QWKTPSSKI 334
Query: 279 LSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLS 338
+ E+ + DD+ +E + ERE + TE
Sbjct: 335 IDEEALTKDDNPEAEENEAVVTERERKALQEEVRKAHGTGTE------------------ 376
Query: 339 AMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDR 398
S P +PT +VV II+R+ R+ VG ++ + R+ +
Sbjct: 377 ----SRP--QPTAKVVGIIKRNWRQ--YVGHIDGSSSSQASSAGRR-------------Q 415
Query: 399 EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHV 458
+ + + P + PK+ + + + + +R + ID W+ +S +P H
Sbjct: 416 QTVFVIPMDKRVPKIRIRTRQANELMGQR------------ILVTIDAWDRDSRYPVGHF 463
Query: 459 LHVFG----RGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEE----LLS 508
+ G +G E E A+L E + F L CLP W+VP++
Sbjct: 464 VRSLGEVETKGAETE----ALLLEYDVQYRPFPQTVLDCLPPEGHDWKVPKDMSDPGWKD 519
Query: 509 RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVR 568
RKDLR+ + +IDP D+DDAL L +G VGVHIADVS FV P A+D EA +R
Sbjct: 520 RKDLRDLLVCSIDPPGCQDIDDALHSRPLPNGNFEVGVHIADVSNFVRPNNAMDTEASMR 579
Query: 569 STSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCC 628
T+VY++ ++I MLP+LL ++ SL P V+R AFS+ W++ +VV ++VI S
Sbjct: 580 GTTVYLVDKRIDMLPMLLGTDLCSLKPHVERYAFSVLWEITPEAEVVSSSFTKSVIFSRE 639
Query: 629 KLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTD 688
SYE AQ ID Q + D+ S+++L +SK+L+ KR
Sbjct: 640 AFSYEQAQLRID-------------------DQSKTDDLTASMRTLLRLSKLLRQKRMEA 680
Query: 689 GALRLENSKPVFLFD-EYGTPYDSVLS-GREDLNFLFEEFMLLANKTAAEVIARAFPDSA 746
GAL L + + D E P V + D N L EEFMLLAN + A I ++P +A
Sbjct: 681 GALNLASPEVRIETDSELSDPVADVKTKALLDTNSLVEEFMLLANISVAARIYESYPQTA 740
Query: 747 LLRRHPAPNMRKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN- 804
LLRRH P E K L LD SSS SL++ + + F+ LI
Sbjct: 741 LLRRHATPPPSNFEELITQLSKKRSLTLDVSSSLALANSLDKC---IDERNPFFNTLIRI 797
Query: 805 YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE 863
ATR M A YFC+G ++++ HY LA P+YTHFTSP+RRY DLVVHR L AA+ E
Sbjct: 798 LATRCMTSAEYFCAG-AHSESEFRHYGLASPIYTHFTSPIRRYADLVVHRQLAAAIGYE 855
>gi|374386255|ref|ZP_09643755.1| ribonuclease R [Odoribacter laneus YIT 12061]
gi|373224184|gb|EHP46524.1| ribonuclease R [Odoribacter laneus YIT 12061]
Length = 744
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 177/521 (33%), Positives = 258/521 (49%), Gaps = 70/521 (13%)
Query: 346 TKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTP 405
++RP G VV I+ER +++ VG + ++ + + L P
Sbjct: 132 SRRPEGEVVEILER--KKNTFVGIIQRSENYAF------------------------LMP 165
Query: 406 THPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ + P V +P S + GD V +I EW E P V+ V GR
Sbjct: 166 SGKQLPYDVF----IPLSHLGGAKNGDK------VVVQITEWPENQKNPVGTVIQVLGRP 215
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
G + ++NAI+ E + + F + L + E+P+EE+ R+D R+ FTIDP A
Sbjct: 216 GNNDTEMNAIMAEYELPVA-FPSKVLKAADRIKLELPEEEVARRRDFRDVVTFTIDPKDA 274
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
D DDALSI L G VGVHIADVSY+V + LD EA +R+TSVY++ R +PMLP
Sbjct: 275 KDFDDALSIRELEGGCYEVGVHIADVSYYVAQDSVLDKEAYLRATSVYLVDRTVPMLPEK 334
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS V SL P ++L FS + L+ V+D+W G+TVI S + +YE AQ +I+G
Sbjct: 335 LSNGVCSLRPNEEKLCFSAVFKLDGNAQVLDQWFGKTVILSNRRFTYEEAQVMIEG---- 390
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEY 705
EG D + I L +++ L+++RF +GA+ + + F DE
Sbjct: 391 ------AEG-----------DYRKEILQLNGLARKLREERFKNGAIDFDRVEVKFELDEQ 433
Query: 706 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR----AFPDSALLRRHPAPNMRKLRE 761
G P ++ N L EEFMLLANK AE + + P + + R H P KL E
Sbjct: 434 GKPLGVYFKQSKEANKLIEEFMLLANKKVAECVGKIKRGQKPKTFVYRIHDKPMDDKLEE 493
Query: 762 FEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDF 821
F F +K G L +S S+ + +++K+ +++ A R M A Y
Sbjct: 494 FNNFVAKFGYGLKLTSRKSLTTSMNKLMQEVKNRPEQ-NMIETLAVRTMAKAVY------ 546
Query: 822 KDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEA 862
+ GHY LAF YTHFTSP+RRYPD++VHR L L+
Sbjct: 547 -STVNIGHYGLAFDYYTHFTSPIRRYPDVMVHRLLQRYLDG 586
>gi|374108052|gb|AEY96959.1| FAEL031Cp [Ashbya gossypii FDAG1]
Length = 997
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 199/562 (35%), Positives = 282/562 (50%), Gaps = 78/562 (13%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 407
+PT RVV+I RS W Y G + + L +
Sbjct: 384 QPTARVVAITRRS--------------WRQYVGQIATNT--------------LDLQDSS 415
Query: 408 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 467
+ ++++ K LP I+ R + +V A ID W +P H + G
Sbjct: 416 TQNVFVILMDKCLP-KIRIRTRRAKELLNKRIVVA-IDSWPATYKYPLGHFVRELGEVES 473
Query: 468 VEPQINAILYENAICCSGFSPESLSCLPC------VPWEVPQEELLS-------RKDLRN 514
VE + A+L E+ + FS + L CLP P ++ E +S R+DLR+
Sbjct: 474 VEAETEALLLEHDVEYRPFSKKVLECLPAEGHDWRAPADLSDPEAISKDPLLPKRRDLRD 533
Query: 515 FCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYM 574
I +IDP D+DDAL +RL +G VGVHIADV++FV PGTALD E R+TSVY+
Sbjct: 534 KLICSIDPPGCVDIDDALHAKRLPNGNWEVGVHIADVTHFVKPGTALDTEGASRATSVYL 593
Query: 575 LQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEH 634
+ ++I MLP+LL ++ SL P VDR AFS+ W+L++ ++V+ ++VIRS SYE
Sbjct: 594 VNKRIDMLPMLLGTDLCSLKPYVDRFAFSVLWELDADANIVNVDFTKSVIRSREAFSYEA 653
Query: 635 AQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLE 694
AQ ID DV ++ L G +++L E+SK LK KR GAL L
Sbjct: 654 AQLRID---DVNQNDELTNG----------------MRALLELSKKLKQKRLDAGALNLA 694
Query: 695 NSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPA 753
+ + V + +E P + + N L EEFMLLAN + A I AFP +A+LRRH A
Sbjct: 695 SPEVKVHMDNETSDPNEVEIKKLLATNSLVEEFMLLANISVARKINDAFPQTAMLRRHAA 754
Query: 754 P---NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRP 809
P N L E K + L++S + SL++ + +D Y F+ L+ +TR
Sbjct: 755 PPSTNFEALNEMLQVRKKMAISLESSKA--LADSLDRCIDP-EDPY--FNTLVRIMSTRC 809
Query: 810 MQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKH 869
M A YF SG F +D+ HY LA +YTHFTSP+RRY D+VVHR L A+ E L H
Sbjct: 810 MMAAQYFYSGAFS-YSDFHHYGLAVDIYTHFTSPIRRYCDVVVHRQLAGAIGYEPLDLTH 868
Query: 870 R-----RMLPKNNHREGVRGRF 886
R M+ KN +R +F
Sbjct: 869 RDKQKMEMICKNINRRHRNAQF 890
>gi|383860552|ref|XP_003705753.1| PREDICTED: exosome complex exonuclease RRP44-like [Megachile
rotundata]
Length = 979
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 178/527 (33%), Positives = 266/527 (50%), Gaps = 59/527 (11%)
Query: 342 SSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYI 401
SS K PTG++V II R+ R+ + + Q N +G R
Sbjct: 326 SSKMQKTPTGKIVGIIRRNWRQ-----YCGILQPSNIEGNVRH----------------- 363
Query: 402 QLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHV 461
P K PK+ + + K+R+ +VA ID W S +P H +
Sbjct: 364 LFVPAERKIPKIRIETRQYTVLSKQRI----------IVA--IDSWPRNSRYPLGHFVRA 411
Query: 462 FGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTID 521
G G+ + IL E+ + S FS LS LP +PW + ++ R+DLR+ I ++D
Sbjct: 412 LGAIGDKATENEVILLEHDVPHSRFSDAVLSSLPKMPWSITDGDIEQREDLRHLDICSVD 471
Query: 522 PSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPM 581
P TD+DDAL +L +G VGVHIADV++F+ PGTALD EA +R+T+VY++ +I M
Sbjct: 472 PPGCTDIDDALHCRKLPNGNFEVGVHIADVTHFIRPGTALDKEAALRATTVYLVDTRIQM 531
Query: 582 LPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDG 641
+P LLS + SL V+RLAFS W+L+ +V++ ++VI S ++Y+ AQ ID
Sbjct: 532 IPELLSTNLCSLRGNVERLAFSCIWELDKDANVINTRYCKSVICSRAAMTYDEAQLKIDD 591
Query: 642 KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFL 701
+S + S+++L ++K LK +R +GAL L + + F
Sbjct: 592 ASQQDS-------------------IAISLRNLNSLAKKLKKRRLENGALVLASPEIRFQ 632
Query: 702 FD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLR 760
D E P D + N + EEFMLLAN + A I FP+ A+LRRHP P
Sbjct: 633 VDSETHDPIDVEAKKLRETNSMVEEFMLLANISVANKIVEEFPECAVLRRHPEPPPANFE 692
Query: 761 EFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSG 819
G ++T++ + +SL++ K D F+ ++ ATR M A YF SG
Sbjct: 693 PLIKAGKNQGFIINTNTGKELAESLDKCH---KADNPYFNTMLRILATRCMMQAVYFISG 749
Query: 820 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
+++ HY LA P+YTHFTSP+RRY D++VHR L + A+ Y
Sbjct: 750 -MHQPSEYFHYGLACPIYTHFTSPIRRYADIMVHRLLAVCIGADATY 795
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 39/73 (53%)
Query: 160 FAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEGD 219
F H + +++ ++ G + + ++ N LE + +EGV+ + I G + NRAV+GD
Sbjct: 224 FPCHLTPSELHDGIKNGKLLQGTFAISRENFLEGFVNVEGVEKQIFIQGRSNLNRAVDGD 283
Query: 220 FVLIKVDRLSLWA 232
V I++ W+
Sbjct: 284 TVAIELLAEDQWS 296
>gi|45190576|ref|NP_984830.1| AEL031Cp [Ashbya gossypii ATCC 10895]
gi|44983518|gb|AAS52654.1| AEL031Cp [Ashbya gossypii ATCC 10895]
Length = 997
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 199/562 (35%), Positives = 282/562 (50%), Gaps = 78/562 (13%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 407
+PT RVV+I RS W Y G + + L +
Sbjct: 384 QPTARVVAITRRS--------------WRQYVGQIATNT--------------LDLQDSS 415
Query: 408 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 467
+ ++++ K LP I+ R + +V A ID W +P H + G
Sbjct: 416 TQNVFVILMDKCLP-KIRIRTRRAKELLNKRIVVA-IDSWPATYKYPLGHFVRELGEVES 473
Query: 468 VEPQINAILYENAICCSGFSPESLSCLPC------VPWEVPQEELLS-------RKDLRN 514
VE + A+L E+ + FS + L CLP P ++ E +S R+DLR+
Sbjct: 474 VEAETEALLLEHDVEYRPFSKKVLECLPAEGHDWRAPADLSDPEAISKDPLLPKRRDLRD 533
Query: 515 FCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYM 574
I +IDP D+DDAL +RL +G VGVHIADV++FV PGTALD E R+TSVY+
Sbjct: 534 KLICSIDPPGCVDIDDALHAKRLPNGNWEVGVHIADVTHFVKPGTALDTEGASRATSVYL 593
Query: 575 LQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEH 634
+ ++I MLP+LL ++ SL P VDR AFS+ W+L++ ++V+ ++VIRS SYE
Sbjct: 594 VNKRIDMLPMLLGTDLCSLKPYVDRFAFSVLWELDADANIVNVDFTKSVIRSREAFSYEA 653
Query: 635 AQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLE 694
AQ ID DV ++ L G +++L E+SK LK KR GAL L
Sbjct: 654 AQLRID---DVNQNDELTNG----------------MRALLELSKKLKQKRLDAGALNLA 694
Query: 695 NSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPA 753
+ + V + +E P + + N L EEFMLLAN + A I AFP +A+LRRH A
Sbjct: 695 SPEVKVHMDNETSDPNEVEIKKLLATNSLVEEFMLLANISVARKINDAFPQTAMLRRHAA 754
Query: 754 P---NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRP 809
P N L E K + L++S + SL++ + +D Y F+ L+ +TR
Sbjct: 755 PPSTNFEALNEMLQVRKKMAISLESSKA--LADSLDRCIDP-EDPY--FNTLVRIMSTRC 809
Query: 810 MQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKH 869
M A YF SG F +D+ HY LA +YTHFTSP+RRY D+VVHR L A+ E L H
Sbjct: 810 MMAAQYFYSGAFS-YSDFHHYGLAVDIYTHFTSPIRRYCDVVVHRQLAGAIGYEPLDLTH 868
Query: 870 R-----RMLPKNNHREGVRGRF 886
R M+ KN +R +F
Sbjct: 869 RDKQKMEMICKNINRRHRNAQF 890
>gi|326475168|gb|EGD99177.1| exosome complex exonuclease exoribonuclease [Trichophyton tonsurans
CBS 112818]
Length = 1044
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 214/719 (29%), Positives = 325/719 (45%), Gaps = 132/719 (18%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
+++ ++SM + + G + ++ V+ +N LE + + +LI G NRA+ G
Sbjct: 255 LYSAYYSMSKIMTLVRAGTLHQGIFNVSLYNYLEGSVNVPAFEKSLLILGRDNSNRAISG 314
Query: 219 DFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCTL 278
D V+++V LP + ++ + +
Sbjct: 315 DVVVVEV-----------------------LPKD-----------------QWKTPSSKI 334
Query: 279 LSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLS 338
+ E+ + DD+ +E + ERE + TE
Sbjct: 335 IDEEALTKDDNPEAEENEAVVTERERKALQEEVRKAHGTGTE------------------ 376
Query: 339 AMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDR 398
S P +PT +VV II+R+ R+ VG ++ + R+ +
Sbjct: 377 ----SRP--QPTAKVVGIIKRNWRQ--YVGHIDGSSSSQASSAGRR-------------Q 415
Query: 399 EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHV 458
+ + + P + PK+ + + + + +R + ID W+ +S +P H
Sbjct: 416 QTVFVIPMDKRVPKIRIRTRQANELMGQR------------ILITIDAWDRDSRYPVGHF 463
Query: 459 LHVFG----RGGEVEPQINAILYENAICCSGFSPESLSCLP--CVPWEVPQEE----LLS 508
+ G +G E E A+L E + F L CLP W+VP++
Sbjct: 464 VRSLGEVETKGAETE----ALLLEYDVQYRPFPQTVLDCLPPEGHDWKVPKDMSDPGWKD 519
Query: 509 RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVR 568
RKDLR+ + +IDP D+DDAL L +G VGVHIADVS FV P A+D EA +R
Sbjct: 520 RKDLRDLLVCSIDPPGCQDIDDALHSRPLPNGNFEVGVHIADVSNFVRPNNAMDTEASMR 579
Query: 569 STSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCC 628
T+VY++ ++I MLP+LL ++ SL P V+R AFS+ W++ +VV ++VI S
Sbjct: 580 GTTVYLVDKRIDMLPMLLGTDLCSLKPHVERYAFSVLWEITPDAEVVSSSFTKSVIFSRE 639
Query: 629 KLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTD 688
SYE AQ ID Q + D+ S+++L +SK+L+ KR
Sbjct: 640 AFSYEQAQLRID-------------------DQSKTDDLTTSMRTLLRLSKLLRQKRMDA 680
Query: 689 GALRLENSKPVFLFD-EYGTPYDSVLS-GREDLNFLFEEFMLLANKTAAEVIARAFPDSA 746
GAL L + + D E P V + D N L EEFMLLAN + A I +FP +A
Sbjct: 681 GALNLASPEVRIETDSELSDPVADVKTKALLDTNSLVEEFMLLANISVAARIYESFPQTA 740
Query: 747 LLRRHPAPNMRKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN- 804
LLRRH P E K L LD SSS SL++ + + F+ LI
Sbjct: 741 LLRRHATPPPSNFEELITQLSKKRNLTLDVSSSLALANSLDKC---VDERNPFFNTLIRI 797
Query: 805 YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE 863
ATR M A YFC+G ++++ HY LA P+YTHFTSP+RRY DLVVHR L AA+ E
Sbjct: 798 LATRCMTSAEYFCAGAHS-ESEFRHYGLASPIYTHFTSPIRRYADLVVHRQLAAAIGYE 855
>gi|195170518|ref|XP_002026059.1| GL16114 [Drosophila persimilis]
gi|194110939|gb|EDW32982.1| GL16114 [Drosophila persimilis]
Length = 1143
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 159/411 (38%), Positives = 227/411 (55%), Gaps = 13/411 (3%)
Query: 456 AHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVP---QEELLSRKDL 512
A ++ GR G + +I AI+ N + S P +P ++L R+DL
Sbjct: 523 AELIQPVGRIGNLPDEIKAIMIHNNL--SDIKPFEQRFNDMFVNHIPPGSTKDLDKRQDL 580
Query: 513 RNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSV 572
R CIFTIDP TA DLDDA+SIE+L D +GVHI+DVS+++ + LD + RSTS+
Sbjct: 581 RKKCIFTIDPLTARDLDDAVSIEQLGDNEYEIGVHISDVSHYLEEDSELDNIVKERSTSI 640
Query: 573 YMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR--WIGRTVIRSCCKL 630
Y+ I MLP L SL PG D+LAFS+FW ++ G + RT+IRSC +
Sbjct: 641 YLANEVIHMLPQTLCMRC-SLLPGEDKLAFSVFWRMDRNGVQLQEKPRFTRTIIRSCTQF 699
Query: 631 SYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGA 690
+YEHAQ IID + + + +P + F+ SDVV+ + L ++ L+ R+ G+
Sbjct: 700 AYEHAQKIIDNPHERFTEH----DFPTVLNGFQTSDVVKRVLCLNGIASSLRKARYEKGS 755
Query: 691 LRLENSKPVFLFDEY-GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLR 749
+ N K F+ D G P D + + + N + EE+MLLAN+ A I AFP+ A+LR
Sbjct: 756 ISFNNPKLRFVLDPISGEPEDFEVEMQREANRMIEEYMLLANQAVARFIYDAFPEIAVLR 815
Query: 750 RHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRP 809
HP P M+ L+ G LD SSS QS+ + ++ + + L +P
Sbjct: 816 NHPPPLMKSLKALREKFQTLGFNLDYSSSKALQQSIIRMCQEAPNPLAMSFCLSRLLMKP 875
Query: 810 MQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
M A+YFCS + D HYAL+ P+YTHFTSP+RRYPD++VHR L AAL
Sbjct: 876 MARANYFCSEGRTEPADLWHYALSIPIYTHFTSPIRRYPDVMVHRLLAAAL 926
>gi|157871546|ref|XP_001684322.1| putative ribonuclease II-like protein [Leishmania major strain
Friedlin]
gi|68127391|emb|CAJ04970.1| putative ribonuclease II-like protein [Leishmania major strain
Friedlin]
Length = 942
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 218/655 (33%), Positives = 325/655 (49%), Gaps = 91/655 (13%)
Query: 342 SSY---PTKRPTGRVVSIIERS-PRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPD 397
SSY P KRP GRV+ I++R PR V + NQ G R + +
Sbjct: 149 SSYEWPPEKRPLGRVIRILKRCLPRLH--VARIADNQ---VSPGER-----------LQE 192
Query: 398 REYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEME-------LVAARIDEWNEE 450
+ Y + P + YP++ V D+ + + ++ +E L R+
Sbjct: 193 KYYYRFRPFNQLYPQLTVQGCDIMAAYHANISTSLFSLALEHRENGEILTTPRV------ 246
Query: 451 SPFPQAHVLHVFGRGGEVEPQINAILYENAICCS------GFSPESLSCLPCVPWEVPQE 504
P A + V G+ A +AIC S FS E+ +C+P + +P
Sbjct: 247 ---PNALLCKVHSFLGDASTMAVA---SHAICTSCNVSTEPFSEEAEACVP-KDFTIPSA 299
Query: 505 ELLS---RKDLRNF-CIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 560
L+ R+DLR+ + TIDP+TA DLDDALSI+ DG VGVHIADVS+FVLP TA
Sbjct: 300 AELADMGRRDLRDSEFVLTIDPATARDLDDALSIKPRKDGGYHVGVHIADVSHFVLPRTA 359
Query: 561 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD---- 616
LD EAQ RS S Y++ R IPMLP LSEE SLNPG D+ AFS ++ + G ++
Sbjct: 360 LDEEAQRRSNSTYLVDRVIPMLPSRLSEEYCSLNPGEDKFAFSGLFEFDRDGHLISEAAT 419
Query: 617 ----RWIGRTVIRSCCKLSYEHAQDIIDGK----FDV-ESSNTLGEGWPQLYGQFEWSDV 667
W G++VIRS C+L+YE AQ I+DG DV ++++ LG G + V
Sbjct: 420 EEKCEWFGQSVIRSRCRLAYEQAQQILDGDDTVVLDVAQAASDLGIG-----EEAARKKV 474
Query: 668 VRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD--EYGTPYDSVLSGRE-DLNFLFE 724
+S+ +L+ ++ L+ + DG + + +++ F FD E +P S + N+L E
Sbjct: 475 KQSVTNLFTLASKLRQQSLRDGRVVIGSTRLAFRFDRNEVNSPPTSFFVQEQIQANWLVE 534
Query: 725 EFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQS 784
EFMLLAN+ A+ I + P ALLRRH P+ +K+R S GL SS + Q
Sbjct: 535 EFMLLANQRVAQKIVQFIPYGALLRRHKPPHPQKMRRLRTALSHRGLPTGGSSGQELQQV 594
Query: 785 LEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPL 844
+E ++ ++D+ L+ Y+ +A+ + + D + H+A+A P YTHFTSP+
Sbjct: 595 IETIKKDHREDFHTVCELLKYSL----MAAEYIANDPTEKDIRSHFAVAAPWYTHFTSPI 650
Query: 845 RRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAE--SLEG 902
RRY DL+VHR L ALE E+ + + +P H + R IF A + L+
Sbjct: 651 RRYCDLMVHRQLRVALELERCMEEAQMEMPHTPH-PALETRPGDCIFDPTRAVDVNKLKT 709
Query: 903 REALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVK----LYMWILLKK 953
RE + L ++ TH N +L R+ D ++ LY+ L K+
Sbjct: 710 RELFYPHS---------ALEHIVTHANGCRLNSRSAGDMSLEYSLCLYLLALQKR 755
>gi|312379668|gb|EFR25868.1| hypothetical protein AND_08402 [Anopheles darlingi]
Length = 991
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 166/435 (38%), Positives = 237/435 (54%), Gaps = 28/435 (6%)
Query: 433 ATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLS 492
AT+ + + ID+W S +PQ H + G G E + IL E+ + + FS E L+
Sbjct: 386 ATLLSQRIIVAIDQWPRHSRYPQGHFVRALGPIGSKETENEVILLEHDVPHNRFSEEVLA 445
Query: 493 CLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVS 552
CLP +PW + E+L R DLR+ I ++DP TD+DDAL RL +G VGVHIADVS
Sbjct: 446 CLPQLPWTITPEDLKRRVDLRDITICSVDPPGCTDIDDALHARRLPNGNIEVGVHIADVS 505
Query: 553 YFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAG 612
+F+ P ALD EA R+T+VY++ ++I M+P LLS + SL G +R AFS W+L+
Sbjct: 506 HFIRPCNALDREAASRATTVYLVDKRIDMVPELLSSNLCSLRGGEERFAFSCVWELDDEA 565
Query: 613 DVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIK 672
+V+ ++VI+S L+ IID + S T +DV S++
Sbjct: 566 NVLHVKFHKSVIKSKEALTL-----IIDDR-----SQT--------------NDVAVSLR 601
Query: 673 SLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLAN 731
L ++KILK +R +GAL L + + F D E P D D N + EEFMLLAN
Sbjct: 602 LLNRLAKILKRRRTENGALVLASPEIRFHVDSETHDPIDVKAKQLLDTNSMVEEFMLLAN 661
Query: 732 KTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREK 791
+ AE I FP+ A+LRRHP P G ++ T++ + SL++A
Sbjct: 662 VSVAEKIESEFPECAMLRRHPQPPQTNFEPLVKAAQHQGFKIITATGKELATSLDEAVNP 721
Query: 792 LKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 851
+ L +L ATR M A YF SG + + ++ HY LA P+YTHFTSP+RRY D++
Sbjct: 722 A--NPYLNTMLRILATRCMMQAVYFISGTLQRE-EFFHYGLAAPIYTHFTSPIRRYADVI 778
Query: 852 VHRTLNAALEAEKLY 866
VHR L A + A+ Y
Sbjct: 779 VHRLLAACIGADSTY 793
Score = 47.0 bits (110), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 142 YTNKDDNPSHQ---SEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIE 198
Y N D S + E + +F H + +++ ++ + + + N LE Y ++E
Sbjct: 205 YANLLDKISQREGSGETKEPLFPSHLTASQIHQGIKNESLLQGAFLASRENYLEGYVRVE 264
Query: 199 GVQTDVLITGIAAQNRAVEGDFVLIKV 225
G++ VLI G NRAV+GD V I++
Sbjct: 265 GIEKPVLIQGRLNLNRAVDGDVVAIEM 291
>gi|302659667|ref|XP_003021521.1| hypothetical protein TRV_04368 [Trichophyton verrucosum HKI 0517]
gi|291185424|gb|EFE40903.1| hypothetical protein TRV_04368 [Trichophyton verrucosum HKI 0517]
Length = 1044
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 214/719 (29%), Positives = 325/719 (45%), Gaps = 132/719 (18%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
+++ ++SM + + G + ++ V+ +N LE + + +LI G NRA+ G
Sbjct: 255 LYSAYYSMSKIMTLIRAGTLHQGIFNVSPYNYLEGSVNVPAFEKSLLILGRDNSNRAISG 314
Query: 219 DFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCTL 278
D V+++V LP + ++ + +
Sbjct: 315 DIVVVEV-----------------------LPKD-----------------QWKTPSSKI 334
Query: 279 LSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLS 338
+ E+ + DD+ +E + ERE + TE
Sbjct: 335 IDEEALTKDDNPEAEENEAVVTERERKALQEEVRKAHGTGTE------------------ 376
Query: 339 AMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDR 398
S P +PT +VV II+R+ R+ VG ++ + R+ +
Sbjct: 377 ----SRP--QPTAKVVGIIKRNWRQ--YVGHIDGSSSSQASSAGRR-------------Q 415
Query: 399 EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHV 458
+ + + P + PK+ + + + + +R + ID W+ +S +P H
Sbjct: 416 QTVFVIPMDKRVPKIRIRTRQANELMGQR------------ILITIDAWDRDSRYPVGHF 463
Query: 459 LHVFG----RGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEE----LLS 508
+ G +G E E A+L E + F L CLP W+VP++
Sbjct: 464 VRSLGEVETKGAETE----ALLLEYDVQYRPFPQTVLDCLPPEGHDWKVPKDMSDPGWND 519
Query: 509 RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVR 568
RKDLR+ + +IDP D+DDAL L +G VGVHIADVS FV P A+D EA +R
Sbjct: 520 RKDLRDLLVCSIDPPGCQDIDDALHSRPLPNGNFEVGVHIADVSNFVRPNNAMDTEASMR 579
Query: 569 STSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCC 628
T+VY++ ++I MLP+LL ++ SL P V+R AFS+ W++ +VV ++VI S
Sbjct: 580 GTTVYLVDKRIDMLPMLLGTDLCSLKPHVERYAFSVLWEITPDAEVVSSSFTKSVIFSRE 639
Query: 629 KLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTD 688
SYE AQ ID Q + D+ S+++L +SK+L+ KR
Sbjct: 640 AFSYEQAQLRID-------------------DQSKTDDLTASMRTLLRLSKLLRQKRMDA 680
Query: 689 GALRLENSKPVFLFD-EYGTPYDSVLS-GREDLNFLFEEFMLLANKTAAEVIARAFPDSA 746
GAL L + + D E P V + D N L EEFMLLAN + A I +FP +A
Sbjct: 681 GALNLASPEVRIETDSELSDPVADVKTKALLDTNSLVEEFMLLANISVAARIYESFPQTA 740
Query: 747 LLRRHPAPNMRKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN- 804
LLRRH P E K L LD SSS SL++ + + F+ LI
Sbjct: 741 LLRRHATPPPSNFEELITQLSKKRNLTLDVSSSLALANSLDKC---VDERNPFFNTLIRI 797
Query: 805 YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE 863
ATR M A YFC+G ++++ HY LA P+YTHFTSP+RRY DLVVHR L AA+ E
Sbjct: 798 LATRCMTSAEYFCAGAHS-ESEFRHYGLASPIYTHFTSPIRRYADLVVHRQLAAAIGYE 855
>gi|410027787|ref|ZP_11277623.1| RNAse R [Marinilabilia sp. AK2]
Length = 731
Score = 270 bits (690), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 158/430 (36%), Positives = 231/430 (53%), Gaps = 38/430 (8%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 499
V +I EW EE P ++ V G+ GE E +I++I+ E + + E +P
Sbjct: 202 VVVKITEWREEDKNPTGKIVRVLGKAGEHEVEIHSIMAEFGLPFE-YPKEVEEEANAIPE 260
Query: 500 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 559
E+P +E+ +R+D+R+ FTIDP A D DDA+S +L +G +GVHIADV+++V P T
Sbjct: 261 EIPADEIKNRRDMRDIPTFTIDPVDAKDFDDAISYRKLENGNYEIGVHIADVTHYVKPKT 320
Query: 560 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 619
L+ EA R+TSVY++ R IPMLP LS + SL P D+L FS ++++ DV++ WI
Sbjct: 321 KLEQEAYDRATSVYLVDRTIPMLPERLSNGLCSLRPNEDKLTFSCVFEMDENADVLNHWI 380
Query: 620 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 679
RTV S + +YE AQ+ ID Q G F + + L E++K
Sbjct: 381 ARTVTHSDRRFAYEEAQENID----------------QQKGDF-----YQELTFLNELAK 419
Query: 680 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVI- 738
++ +RF GA+ E + F D+ GTP ++ R+D++ L EEFMLLAN+T AE I
Sbjct: 420 KIRKRRFDKGAINFETVEVKFKLDDKGTPLGLMIKERKDIHKLIEEFMLLANRTVAEFIY 479
Query: 739 -ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYV 797
D+ + R H P++ KL F F + G + S + ++L Q L D+ V
Sbjct: 480 NRNKGKDTFVYRIHDFPDIEKLETFSTFAKRFGHDIKISEGTKISKALNQ----LMDEIV 535
Query: 798 ---LFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 854
++L A R M A Y GH+ LAF YTHFTSP+RRYPD++VHR
Sbjct: 536 GKPEQNVLEQLAIRSMAKAKYTTEPK-------GHFGLAFKHYTHFTSPIRRYPDMMVHR 588
Query: 855 TLNAALEAEK 864
L L+ K
Sbjct: 589 LLQHYLDGGK 598
>gi|449310612|gb|AGE92533.1| RRP44p-like protein [Leishmania braziliensis]
gi|449310634|gb|AGE92544.1| RRP44p-like protein [Leishmania braziliensis]
Length = 920
Score = 270 bits (690), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 171/463 (36%), Positives = 245/463 (52%), Gaps = 38/463 (8%)
Query: 401 IQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLH 460
I P + + P++ + + + D + KRL + ID+W S FP H +
Sbjct: 301 ILFQPKNNRIPRIRISTRHVQDLMDKRL------------SVVIDDWPLYSSFPVGHYVE 348
Query: 461 VFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTI 520
V G+ G+ + + IL EN + FS CLP W V ++E R DLR+ CI ++
Sbjct: 349 VLGKIGDRDTEATVILLENDVPHYDFSEAVHDCLPKGQWAVTKDEEAKRLDLRDLCIVSV 408
Query: 521 DPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIP 580
DP D+DDAL ++ VGVHIADV++F+ GTA+D EA RSTSVY++ R+I
Sbjct: 409 DPLGCRDIDDALHCRAVNGNHLEVGVHIADVTHFLPGGTAMDEEAAKRSTSVYLVDRRIN 468
Query: 581 MLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIID 640
MLP LL+E + SL DR AFSI W+ + +VV W G+T+IRS L Y AQ +ID
Sbjct: 469 MLPQLLTENLCSLVEAEDRYAFSILWEFDENLNVVRDWFGKTIIRSRGALYYGDAQRMID 528
Query: 641 GKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVF 700
D SD+ S++ L +SK K +R DGAL L + + F
Sbjct: 529 NPADT-------------------SDIAVSLRELMRLSKHFKAQREKDGALFLASQEFKF 569
Query: 701 LFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKL 759
D E+ P D + + N + EE+ML AN A + ++P ALLRRH P
Sbjct: 570 KVDNEHVNPTDMQMYQTFEANSMIEEWMLYANAAVATKVYESYPQWALLRRHERPAEGAF 629
Query: 760 REF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFC 817
+A K ++LD ++S + SL++ E +D Y F+ LI TR ++ A YF
Sbjct: 630 DTLNDALFGKLHVRLDDTTSLTLNTSLDKC-EDPRDPY--FNRLIRILTTRCLRQAQYFS 686
Query: 818 SGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
SG D ++ H+ LA P+YTHFTSP+RRY D++VHR L AA+
Sbjct: 687 SGGIPKD-EFCHFGLAMPIYTHFTSPIRRYADVIVHRQLAAAI 728
Score = 39.7 bits (91), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 13/87 (14%)
Query: 158 KIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTD--------VLITGI 209
++F P+ SM A+N ++ G +K RV+ E C ++ +LI G
Sbjct: 163 QLFTPYLSMTALNAGVQDGSLYKGKLRVS-----ETSCFFGEIRGKFERHNFQRILIQGR 217
Query: 210 AAQNRAVEGDFVLIKVDRLSLWAKMKG 236
A NRA+ D V +++ +S W KG
Sbjct: 218 ANMNRAIHDDIVAVQLLPVSSWRGPKG 244
>gi|395329023|gb|EJF61412.1| RNB-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 990
Score = 270 bits (690), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 191/546 (34%), Positives = 273/546 (50%), Gaps = 69/546 (12%)
Query: 336 RLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNY--KGGSRKDAKKNRSSL 393
R A+ + +K+PTGRVV II+R+ W +Y S N +SL
Sbjct: 362 RAEAVKRAESSKQPTGRVVGIIKRN--------------WRSYVCHIDSTSLTSTNPTSL 407
Query: 394 SVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPF 453
S ++ + TP P+ I+ R + A + +++ ID W S +
Sbjct: 408 S---QQTVFATPVSRLLPR-----------IRLRTRQAPALVGQKILVT-IDRWERTSRY 452
Query: 454 PQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEELLS--- 508
P+ H + G+ E + ++L E + F L CLP W VP + +
Sbjct: 453 PEGHFIRALGKVQSKEAEQESLLLEFDVPYRPFGKAILDCLPVEGDKWIVPPKNPVDPNW 512
Query: 509 --RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQ 566
R+DLR+ I +IDP D+DDAL RL +G GVHIADVS+FV P T +D EA
Sbjct: 513 KDREDLRDLIICSIDPPGCQDIDDALHARRLPNGNIEAGVHIADVSHFVHPDTPMDSEAA 572
Query: 567 VRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRS 626
R T+VY++ ++I MLP LL + SL P V+RLAFS+ W+L+ D+V+ ++VI S
Sbjct: 573 ARGTTVYLVDKRIDMLPALLGTNLCSLRPHVERLAFSVIWELSPEADIVNVRFTKSVIAS 632
Query: 627 CCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRF 686
+YE AQ D D S+ L E SI+ L ++++ L+++R
Sbjct: 633 KSAFTYEEAQIRKD---DPGLSDELTE----------------SIRLLNDLARKLRERRM 673
Query: 687 TDGALRLENSKPVFLFD--EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPD 744
GAL L + + D E P D + N L EEFMLLAN + A I FP
Sbjct: 674 AAGALNLASPEVKIQLDSSESSDPVDVEQKELRETNSLVEEFMLLANISVARKIQETFPQ 733
Query: 745 SALLRRH---PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDI 801
+A+LRRH P N KL++ + G+ LD SSSG SL++ + + F+
Sbjct: 734 TAVLRRHLPPPRTNFEKLQDI--LGRRKGMTLDVSSSGALAASLDKC---VDPNEPAFNT 788
Query: 802 LIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
L+ ATR M A YFCSG DT +GHY LA P+YTHFTSP+RRY D++ HR L AA+
Sbjct: 789 LVRIMATRCMLSAEYFCSGSVARDT-FGHYGLASPIYTHFTSPIRRYADVLAHRQLAAAI 847
Query: 861 EAEKLY 866
L+
Sbjct: 848 GYAPLH 853
Score = 40.0 bits (92), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 37/78 (47%)
Query: 148 NPSHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLIT 207
+P+ + AR ++ + + ++ G + + N N LE + G + VL+
Sbjct: 240 DPTPAAAARQALYPDYLPTTTLLAGVKSGRLHQGHFNANQFNYLEGSVPVPGFEKPVLLV 299
Query: 208 GIAAQNRAVEGDFVLIKV 225
G NRAV+GD V ++V
Sbjct: 300 GREHMNRAVQGDVVAVEV 317
>gi|390344153|ref|XP_787332.3| PREDICTED: exosome complex exonuclease RRP44-like
[Strongylocentrotus purpuratus]
Length = 1091
Score = 270 bits (690), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 157/428 (36%), Positives = 231/428 (53%), Gaps = 23/428 (5%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 499
+ ID W +S +P H + G G+ + + +L E+ + FS LS LP +PW
Sbjct: 522 IIVSIDSWPRDSRYPLGHFVRNLGAIGDKDTENEVLLLEHDVPHLPFSEAVLSFLPKLPW 581
Query: 500 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 559
+ +E+ R+DLR+ I ++DP TD+DDAL + L +G + VGVHIADVS+F+ PG
Sbjct: 582 TITKEDETVREDLRHIDICSVDPPGCTDIDDALHYKPLENGNAEVGVHIADVSHFIKPGN 641
Query: 560 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 619
ALD EA R T+VY++ R+I M+P LLS + SL GV+R AFS W++ ++V+
Sbjct: 642 ALDTEACSRGTTVYLVDRRIDMVPDLLSSNLCSLRGGVERFAFSTLWEMTPGAEIVNVRF 701
Query: 620 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 679
+++I+S +YE AQ+ ID K ++ L G ++ L ++K
Sbjct: 702 TKSIIKSRAAYTYEQAQNKIDDK---SQNDALAIG----------------LRGLLRMAK 742
Query: 680 ILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVI 738
ILK KR +GAL L +S+ F D E P + + N + EEFMLLAN + A+ I
Sbjct: 743 ILKQKRTDNGALTLASSEIRFSMDSETHDPIEVERKVMRETNSMVEEFMLLANVSVAQRI 802
Query: 739 ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVL 798
+ FP SA LRRHP P + G +L S SL++A +
Sbjct: 803 RQEFPQSACLRRHPVPPLSNFEPIIKVALTRGFELQVDSGKALADSLDKA--NIPSIPFF 860
Query: 799 FDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNA 858
+L TR M A YF SG +D ++ H+ LA P+YTHFTSP+RRY D++VHR L
Sbjct: 861 NQLLRMMTTRCMTQALYFSSGMLPED-EYLHFGLASPIYTHFTSPIRRYSDVIVHRMLAV 919
Query: 859 ALEAEKLY 866
A+ A+ +
Sbjct: 920 AISADACF 927
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%)
Query: 155 ARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNR 214
R ++ H S +N +++G K ++ + N E Y ++G++ V I G+A QNR
Sbjct: 354 GRNVLYPEHLSSYEINAGIKQGRYKKGTFKASRENFREGYVSVQGMEKMVFIKGLANQNR 413
Query: 215 AVEGDFVLIKVDRLSLW 231
AV+GD V +++ S W
Sbjct: 414 AVQGDIVAVEMFSESQW 430
>gi|154340223|ref|XP_001566068.1| putative rrp44p homologue [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063387|emb|CAM39564.1| putative rrp44p homologue [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 920
Score = 270 bits (690), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 171/463 (36%), Positives = 245/463 (52%), Gaps = 38/463 (8%)
Query: 401 IQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLH 460
I P + + P++ + + + D + KRL + ID+W S FP H +
Sbjct: 301 ILFQPKNNRIPRIRISTRHVQDLMDKRL------------SVVIDDWPLYSSFPVGHYVE 348
Query: 461 VFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTI 520
V G+ G+ + + IL EN + FS CLP W V ++E R DLR+ CI ++
Sbjct: 349 VLGKIGDRDTEATVILLENDVPHYDFSEAVHDCLPKGQWAVTKDEEAKRLDLRDLCIVSV 408
Query: 521 DPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIP 580
DP D+DDAL ++ VGVHIADV++F+ GTA+D EA RSTSVY++ R+I
Sbjct: 409 DPLGCRDIDDALHCRAVNGNHLEVGVHIADVTHFLPGGTAMDEEAAKRSTSVYLVDRRIN 468
Query: 581 MLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIID 640
MLP LL+E + SL DR AFSI W+ + +VV W G+T+IRS L Y AQ +ID
Sbjct: 469 MLPQLLTENLCSLVEAEDRYAFSILWEFDENLNVVRDWFGKTIIRSRGALYYGDAQRMID 528
Query: 641 GKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVF 700
D SD+ S++ L +SK K +R DGAL L + + F
Sbjct: 529 NPADT-------------------SDIAVSLRELMRLSKHFKAQREKDGALFLASQEFKF 569
Query: 701 LFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKL 759
D E+ P D + + N + EE+ML AN A + ++P ALLRRH P
Sbjct: 570 KVDNEHVNPTDMQMYQTFEANSMIEEWMLYANAAVATKVYESYPQWALLRRHERPAEGAF 629
Query: 760 REF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFC 817
+A K ++LD ++S + SL++ E +D Y F+ LI TR ++ A YF
Sbjct: 630 DTLNDALFGKLHVRLDDTTSLTLNTSLDKC-EDPRDPY--FNRLIRILTTRCLRQAQYFS 686
Query: 818 SGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
SG D ++ H+ LA P+YTHFTSP+RRY D++VHR L AA+
Sbjct: 687 SGGIPKD-EFCHFGLAMPIYTHFTSPIRRYADVIVHRQLAAAI 728
Score = 39.7 bits (91), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 13/87 (14%)
Query: 158 KIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTD--------VLITGI 209
++F P+ SM A+N ++ G +K RV+ E C ++ +LI G
Sbjct: 163 QLFTPYLSMTALNAGVQDGSLYKGKLRVS-----ETSCFFGEIRGKFERHNFQRILIQGR 217
Query: 210 AAQNRAVEGDFVLIKVDRLSLWAKMKG 236
A NRA+ D V +++ +S W KG
Sbjct: 218 ANMNRAIHDDIVAVQLLPVSSWRGPKG 244
>gi|449270661|gb|EMC81320.1| DIS3-like exonuclease 1, partial [Columba livia]
Length = 1008
Score = 270 bits (690), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 175/517 (33%), Positives = 271/517 (52%), Gaps = 38/517 (7%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTG+VV II+++ RD +V F K S + + + +TP
Sbjct: 283 PTGKVVGIIQKN-WRDYVVTF----------------PSKEESQSQGRNAQKVLVTPWDY 325
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK I+ ++ +A + +V RID W S +P H + V G+ G++
Sbjct: 326 RIPK-----------IRISTQQAEALQDYRVVV-RIDSWESTSVYPNGHFVRVLGKIGDL 373
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLRN-FCIFTIDPS 523
E ++ AIL EN+IC + FS +S +P PW+V EE R DLR+ IF+IDP
Sbjct: 374 EGEVAAILVENSICVAPFSEIQMSEMPVSSSKNPWKVNPEEEKKRLDLRDTHLIFSIDPK 433
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
D+DDALS+ L G +GVHIADV+ FV + D+EA+ R+T+ Y+ R+ MLP
Sbjct: 434 GCEDVDDALSVRSLPSGNLELGVHIADVTQFVAANSYTDVEARARATTYYLADRRYDMLP 493
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
+LS ++ SL G+DR A S+ W+L +V+ +T+IRS KL+YE AQ ++DG
Sbjct: 494 SVLSADICSLLSGLDRYAVSVLWELEKESYEVLRVCYNKTIIRSAYKLAYETAQGLLDGD 553
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
+ + + + +++V +I L ++++ ++ KR + GAL LE +
Sbjct: 554 TSAVGDIPELKNLDERTREKKLAELVWAISKLTDIARHVRAKRDSCGALELEGVEIRVQL 613
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
D+ +D + +++ E M+LAN A+ I+ FP ALLR+HP P E
Sbjct: 614 DDQHNIHDLIPKQPLEVHETVAECMILANHWVAKKISENFPHQALLRQHPPPRQEFFTEL 673
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
S G +DT S+ +SL +A + D ++ +L + AT M A YF +G
Sbjct: 674 RECASSKGFSIDTRSNKTLAESLNKAHD--PQDPIVNKLLRSMATHAMSNALYFSTGSCP 731
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAA 859
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA
Sbjct: 732 EE-EFHHYGLALEKYTHFTSPIRRYADIVVHRLLMAA 767
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 150 SHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHN-RLEAYCKIEG-------VQ 201
S E K + H E + ++ G + VN H +LEA+ +++G +Q
Sbjct: 168 SESQENSGKEYPEHLPGEILEAGIKSGRYIQGTLNVNKHRAQLEAFVRLQGFGSKETELQ 227
Query: 202 TDVLITGIAAQNRAVEGDFVLIKVDRLSLW 231
+D+LI G A+NRA+ GD V +++ + W
Sbjct: 228 SDILIYGAKARNRAIHGDVVAVELLPVQEW 257
>gi|440751423|ref|ZP_20930656.1| 3'-to-5' exoribonuclease RNase R [Mariniradius saccharolyticus AK6]
gi|436480065|gb|ELP36330.1| 3'-to-5' exoribonuclease RNase R [Mariniradius saccharolyticus AK6]
Length = 730
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 161/431 (37%), Positives = 231/431 (53%), Gaps = 40/431 (9%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFS-PESLSCLPCVP 498
V ++ EW E+ P V+ V G+ GE E +I++I+ E + S PE + +P
Sbjct: 201 VVVKLSEWREDDKNPTGKVIRVLGKAGEHEVEIHSIMAEFGLPFEYPSGPEEEAN--AIP 258
Query: 499 WEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPG 558
+PQ+E+ SR+D+R+ FTIDP A D DDA+S + L +G +GVHIADV+Y+V P
Sbjct: 259 EAIPQQEIQSRRDMRDVPTFTIDPVDAKDFDDAISYQVLPNGNYEIGVHIADVTYYVKPK 318
Query: 559 TALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW 618
T L+ EA R+TSVY++ R IPMLP LS + SL P D+L FS ++++ DVV W
Sbjct: 319 TQLEKEAFDRATSVYLVDRTIPMLPERLSNGLCSLRPNEDKLTFSCVFEMDENADVVKHW 378
Query: 619 IGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVS 678
IGRTV S + +YE Q+ ID + D + + L +++
Sbjct: 379 IGRTVTHSNRRFAYEEGQENIDN---------------------QSGDFYQELTILNDLA 417
Query: 679 KILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVI 738
K L+ +RF GA+ E + F DE G P ++ R+D++ L EEFMLLAN+T AE I
Sbjct: 418 KKLRKRRFDKGAVNFETVEVKFKLDEKGKPLGLMVKERKDIHKLIEEFMLLANRTVAEFI 477
Query: 739 AR--AFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDY 796
D+ + R H P++++L F F K G L S + ++L Q L D+
Sbjct: 478 YNKDKGKDTFVYRIHDFPDLQRLETFATFAKKFGHDLKISEGAKISKALNQ----LMDEI 533
Query: 797 V---LFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVH 853
V ++L A R M A Y GH+ LAF YTHFTSP+RRYPD++VH
Sbjct: 534 VGKPEQNVLEQLAIRSMAKAKYTTEAK-------GHFGLAFAHYTHFTSPIRRYPDMMVH 586
Query: 854 RTLNAALEAEK 864
R L L+ K
Sbjct: 587 RLLQHYLDNGK 597
>gi|326436223|gb|EGD81793.1| mitotic control protein dis3 [Salpingoeca sp. ATCC 50818]
Length = 1066
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 164/435 (37%), Positives = 235/435 (54%), Gaps = 26/435 (5%)
Query: 435 IEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCL 494
I ++V A ID W +S +P H + G G+ E + +L E+ + FS L CL
Sbjct: 377 IGQQIVVA-IDAWPSKSRYPVGHFVRRLGPIGDRETETEVVLLEHDVPYEAFSQAVLDCL 435
Query: 495 PCVPWEVPQ--EELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVS 552
P W + L R+DLR+ I ++DP TD+DDAL L +G +GVHIADV+
Sbjct: 436 PSETWTCSDAPDSLAKRRDLRHLNICSVDPPGCTDIDDALHARELDNGNYEIGVHIADVT 495
Query: 553 YFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAG 612
YFV PG+ALD EA R T+VY+ R+I M+P LLS + SL G +R AFS W++
Sbjct: 496 YFVRPGSALDKEAAKRGTTVYLADRRIDMVPGLLSSNLCSLRGGEERFAFSCVWEITKEA 555
Query: 613 DVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIK 672
++V +++I+S + Y AQ ID K D S++ +S++
Sbjct: 556 EIVSTEFFKSIIKSKSAMMYSEAQMRIDDKSD-------------------NSELTQSLR 596
Query: 673 SLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLAN 731
L ++K L+ +R GAL L +++ F D E P D + + + N + EEFMLLAN
Sbjct: 597 VLNSLAKKLRRRRIERGALMLASTEVRFSMDNETNDPVDMKIKEQYETNSMVEEFMLLAN 656
Query: 732 KTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREK 791
+ AE I R FP A+LRRHP+P G++L T+SS + SL++A +
Sbjct: 657 VSTAEHIFRHFPQCAVLRRHPSPPPANFEPLLKAAHVAGVELSTASSKELAVSLDRAAPE 716
Query: 792 LKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 851
K L +L ATR M A YF SG T++ HY LA P+YTHFTSP+RRY D++
Sbjct: 717 GKP--YLRTLLRMLATRCMMQAVYFSSGTVP-QTEFKHYGLASPIYTHFTSPIRRYADVL 773
Query: 852 VHRTLNAALEAEKLY 866
VHR L A++ A+ Y
Sbjct: 774 VHRLLAASIGADITY 788
>gi|146091582|ref|XP_001470065.1| putative ribonuclease II-like protein [Leishmania infantum JPCM5]
gi|134084859|emb|CAM69257.1| putative ribonuclease II-like protein [Leishmania infantum JPCM5]
Length = 942
Score = 270 bits (689), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 213/650 (32%), Positives = 324/650 (49%), Gaps = 90/650 (13%)
Query: 345 PTKRPTGRVVSIIERS-PRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQL 403
P KRP GRV+ I++R PR V + NQ +G + ++ Y +
Sbjct: 155 PEKRPLGRVIRILKRCLPRLH--VARIADNQVHPGEG--------------LQEKYYYRF 198
Query: 404 TPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEME-------LVAARIDEWNEESPFPQA 456
P + YP++ V D+ + + ++ +E L R+ P A
Sbjct: 199 RPFNQLYPQLTVQGCDIMAAYHANISTSLFSLALEHGENGEILTTPRV---------PNA 249
Query: 457 HVLHVFGRGGEVEPQINAILYENAICCS------GFSPESLSCLPCVPWEVPQEELLS-- 508
+ V G+ A +AIC S FS E+ +C+ + +P L+
Sbjct: 250 LLCKVHSFLGDASTMAVA---SHAICTSCNVSNEPFSEEAEACV-LKDFTIPSPAELADM 305
Query: 509 -RKDLRNF-CIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQ 566
R+DLR+ + TIDP+TA DLDDALSI+ DG VGVHIADVS+FVLP TALD EAQ
Sbjct: 306 GRRDLRDSEFVLTIDPATARDLDDALSIKPRKDGGYHVGVHIADVSHFVLPRTALDEEAQ 365
Query: 567 VRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD--------RW 618
RS S Y++ R IPMLP LSEE SLNPG D+ AFS ++ + G ++ W
Sbjct: 366 RRSNSTYLVDRVIPMLPSRLSEEYCSLNPGEDKFAFSGLFEFDRDGHLISEAATGEKCEW 425
Query: 619 IGRTVIRSCCKLSYEHAQDIIDGK----FDV-ESSNTLGEGWPQLYGQFEWSDVVRSIKS 673
G++VIRS C+L+YE AQ I+DG DV ++++ LG G + V +S+ +
Sbjct: 426 FGQSVIRSRCRLAYEQAQQILDGDDTVVLDVAQAASDLGIG-----EEAARKKVKQSVTN 480
Query: 674 LYEVSKILKDKRFTDGALRLENSKPVFLFD--EYGTPYDSVLSGRE-DLNFLFEEFMLLA 730
L+ ++ L+ + DG + + N++ F FD E +P S + N+L EEFMLLA
Sbjct: 481 LFALASKLRQQSLRDGRVVIGNTRLAFRFDRNEVNSPPTSFFVQEQIQANWLVEEFMLLA 540
Query: 731 NKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQARE 790
N+ A+ I + P ALLRRH P +K+R S GL SS + + ++ ++
Sbjct: 541 NQRVAQKIVQYIPYGALLRRHKPPQPQKMRRLRTALSHRGLPTGGSSGQELQRMIDTIKK 600
Query: 791 KLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDL 850
+ D+ L+ Y+ +A+ + + D + H+A+A P YTHFTSP+RRY DL
Sbjct: 601 DHRGDFHTVCELLKYSL----MAAEYIANDPTEKDIRSHFAVAAPWYTHFTSPIRRYCDL 656
Query: 851 VVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAE--SLEGREAL-S 907
+VHR L ALE E+ + + +P H + R + IF A + L+ RE
Sbjct: 657 MVHRQLRVALELERCMEEAQMEMPNAPH-PALETRPVDCIFDPTRAVDVHKLKTRELFYP 715
Query: 908 VAALKYGVPCADILVNVATHCNDRKLACRNVKDACVK----LYMWILLKK 953
++AL++ + TH N+ +L R+ D ++ LY+ L K+
Sbjct: 716 LSALEH----------IVTHANECRLNSRSAGDMSLEYSLCLYLLALQKR 755
>gi|71649179|ref|XP_813334.1| RRP44p homologue [Trypanosoma cruzi strain CL Brener]
gi|70878207|gb|EAN91483.1| RRP44p homologue, putative [Trypanosoma cruzi]
Length = 972
Score = 270 bits (689), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 185/526 (35%), Positives = 270/526 (51%), Gaps = 54/526 (10%)
Query: 349 PTGRVVSI--IERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 406
P GRVV I +ER P G ++V + +R A + + S +V + P
Sbjct: 328 PVGRVVGITSMERRP----FCGSIDVEEL------TRLTASEGKISGAVS----VLFQPK 373
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 466
+ P++ + +DL KRL + ID+W E + FP H + V G G
Sbjct: 374 DNRIPRIRISTRDLEYLKDKRL------------SVIIDDWPEYNSFPVGHYVEVLGTIG 421
Query: 467 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 526
+ + + IL EN + FS CLP W V ++EL R DLR+ C+ ++DP
Sbjct: 422 DKDTEAKVILLENDVPHYDFSEAVYDCLPKGQWSVSKDELERRLDLRDLCVVSVDPLGCR 481
Query: 527 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 586
D+DDAL +++ VGVHIADV++F+ TA+D EA RSTSVY++ R+I MLP LL
Sbjct: 482 DIDDALHCRVVNENHFEVGVHIADVTHFLHENTAMDEEAAKRSTSVYLVDRRINMLPQLL 541
Query: 587 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 646
+E + S+ DR AFSI W+ + +VV + G+TVIRS L Y AQ +ID DV
Sbjct: 542 TENLCSIVSNEDRYAFSILWEFDEEYNVVRDYFGKTVIRSRAALYYGDAQRMID---DVN 598
Query: 647 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVF-LFDEY 705
S++ S++ L +S+ K R DGAL L + + F + +++
Sbjct: 599 DK----------------SEIAVSLRHLMNISRHFKAMREKDGALFLASQEFKFKVENDH 642
Query: 706 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF-EA 764
P D + + N + EE+ML AN AA + ++P LLRRH P EA
Sbjct: 643 VNPTDMQVYQTFEANSMIEEWMLFANAAAARKVYESYPRWTLLRRHQRPAENAFDNLNEA 702
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKD 823
K GL+LD ++S + SL + D V F+ LI TR ++ A YF S +
Sbjct: 703 LERKLGLRLDDTTSLTLNTSLNAC---IDPDDVYFNQLIRILVTRCLRQAQYFSSSEVSQ 759
Query: 824 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKH 869
D ++ H+ LA P+YTHFTSP+RRY D++VHR L AAL ++ KH
Sbjct: 760 D-EFYHFGLAMPIYTHFTSPIRRYADVIVHRQLAAALGIMQVSEKH 804
>gi|410912588|ref|XP_003969771.1| PREDICTED: DIS3-like exonuclease 1-like [Takifugu rubripes]
Length = 1044
Score = 270 bits (689), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 182/524 (34%), Positives = 273/524 (52%), Gaps = 44/524 (8%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVP-DREYIQLTPTH 407
PTGRVV I++R+ RD +V F + G++ ++ ++ L+VP DR
Sbjct: 319 PTGRVVGILQRN-WRDYVVTFPP-------RDGTQPQSRNSKHILTVPWDR--------- 361
Query: 408 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 467
+ PK I+ ++ DA ++ V RID W S +P H + V GR GE
Sbjct: 362 -RIPK-----------IRISTQQADA-LQDHRVVVRIDSWESTSQYPNGHTVRVLGRAGE 408
Query: 468 VEPQINAILYENAICCSGFSPESLSCLPC----VPWEVPQEELLSRKDLR-NFCIFTIDP 522
+E +I IL EN I S FS L +P PW V ++ +R+DLR + +F+IDP
Sbjct: 409 LETEIQTILVENCIHVSSFSEAQLREMPVNSPERPWRVDAAQVAARRDLRESRLVFSIDP 468
Query: 523 STATDLDDALSIERLSDGIS-RVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPM 581
D+DD LS+ RL G + +GVHIADV++FV G+ D+EA++R+T+ Y+ R+ M
Sbjct: 469 RGCEDVDDTLSVHRLDGGAALELGVHIADVTHFVAEGSLTDVEARLRATTYYLADRRYDM 528
Query: 582 LPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV-DRWIGRTVIRSCCKLSYEHAQDIID 640
LP +LS ++ SL GVDR A S+ W L++ V D W GRT+IRS +L YE AQ +++
Sbjct: 529 LPPVLSSDLCSLLGGVDRYAMSVIWQLDAHTLAVRDVWFGRTIIRSSYQLHYELAQALLN 588
Query: 641 GKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVF 700
G + L P+ + + + ++++ L +V++ L+ +R GAL LE +
Sbjct: 589 G--EPAEVPELAALRPE-EKDAKLAKLTQALEMLTQVARHLRARRDRGGALELEGMEVQA 645
Query: 701 LFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLR 760
D+ V +++ E M+ AN A I FP ALLRRHP P
Sbjct: 646 QLDKDKNITALVPRQPLEVHETVAECMIYANHWVARKIQETFPHQALLRRHPPPRQEFFS 705
Query: 761 EFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGD 820
+ + G + T S+ +SL+QA + D ++ +L AT M A YF +G
Sbjct: 706 QLVDSATARGFTISTRSNKDLAESLDQAVD--PQDALVNRLLRMMATSAMSQALYFSTG- 762
Query: 821 FKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
+ + HY LA YTHFTSP+RRY D VVHR L AA+ E+
Sbjct: 763 LQPQDQYYHYGLALDRYTHFTSPIRRYADTVVHRLLTAAVALEE 806
>gi|396462694|ref|XP_003835958.1| similar to exosome complex exonuclease exoribonuclease (Rrp44)
[Leptosphaeria maculans JN3]
gi|312212510|emb|CBX92593.1| similar to exosome complex exonuclease exoribonuclease (Rrp44)
[Leptosphaeria maculans JN3]
Length = 1070
Score = 270 bits (689), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 220/733 (30%), Positives = 328/733 (44%), Gaps = 139/733 (18%)
Query: 152 QSEARCK----IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLIT 207
Q E R K +A H+S+ + ++ G + ++ V+ +N LE + +L+
Sbjct: 247 QREVRSKKAEVFYADHYSVSKMMTGVKAGTLHQGIFNVSPYNYLEGSVHVPAFDKSLLVL 306
Query: 208 GIAAQNRAVEGDFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKV 267
G NRAV GD +V LP +
Sbjct: 307 GRENSNRAVSGD-----------------------VVVVEVLPKD--------------- 328
Query: 268 DVSYEYSNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQ 327
++ + ++ E+ ++ +D++ +E EG N I+ K + Q
Sbjct: 329 --QWKAPSTKIIEEETMNKNDNAEAE---------EGENVISERERRALQEEVKRTHGQS 377
Query: 328 NDGMNAIERLSAMISSYPTKRP--TGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKD 385
+G RP T RVV II+R+ W Y G +D
Sbjct: 378 IEG-----------------RPQPTARVVGIIKRN--------------WRQYVGHIDRD 406
Query: 386 AKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARID 445
+ ++ S S ++ + L P + PK+ + + + + +R + A ID
Sbjct: 407 SVRSVSKSSR-QQQTVFLVPMDKRIPKIRIRTRQAGELLGQR------------ILATID 453
Query: 446 EWNEESPFPQAHVLHVFG----RGGEVEPQINAILYENAICCSGFSPESLSCLPC----- 496
W+ +S +P H + G +G E E A+L E + F L CLP
Sbjct: 454 SWDIDSRYPVGHFVRSLGELESKGAETE----ALLLEWDVQYKPFPKTVLDCLPAEGHDW 509
Query: 497 -VPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFV 555
VP + RKDLR+ + +IDP D+DDAL +L +G +VGVHIADVS+FV
Sbjct: 510 KVPTSLEDPGWKGRKDLRDLLVCSIDPVGCVDIDDALHAHKLPNGNYQVGVHIADVSHFV 569
Query: 556 LPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV 615
P A+D EA R T+VY++ ++I MLP+LL ++ SL P V+R AFS+ W++ ++V
Sbjct: 570 KPNNAMDKEASQRGTTVYLVDKRIDMLPMLLGTDLCSLKPYVERYAFSVIWEVTEDAEIV 629
Query: 616 DRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 675
++VIRS SYE AQ ID K + D+ +++L
Sbjct: 630 SSQFTKSVIRSREAFSYEQAQIRIDDK-------------------SQEDDLTNGMRTLL 670
Query: 676 EVSKILKDKRFTDGALRLENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTA 734
+SK LK KR GAL L + + V E P D D N L EEFMLLAN +
Sbjct: 671 MLSKKLKQKRMEAGALNLSSPEVKVQTESETSDPVDVQTKKLLDTNSLVEEFMLLANISV 730
Query: 735 AEVIARAFPDSALLRRHPAPNMRKLREFE-AFCSKHGLQLDTSSSGQFHQSLEQAREKLK 793
A AFP +ALLRRH AP E + K G++L T SS SL++ +
Sbjct: 731 AAKNYEAFPQTALLRRHAAPPKTNFEELDNQLKVKKGMELKTDSSKALADSLDKC---VD 787
Query: 794 DDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 852
+ F+ L+ ATR M A YFC+G + ++ HY LA +YTHFTSP+RRY DL
Sbjct: 788 PNNPFFNTLVRIMATRCMMSAEYFCAGT-QAYPEFRHYGLASEIYTHFTSPIRRYADLEA 846
Query: 853 HRTLNAALEAEKL 865
HR L AA+E E+L
Sbjct: 847 HRQLAAAIEYEQL 859
>gi|326926869|ref|XP_003209619.1| PREDICTED: DIS3-like exonuclease 1-like [Meleagris gallopavo]
Length = 1054
Score = 269 bits (687), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 176/517 (34%), Positives = 280/517 (54%), Gaps = 38/517 (7%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTG+VV II+++ RD +V F SR++++ + + I +TP
Sbjct: 327 PTGKVVGIIQKN-WRDYVVTF-----------PSREESQSQGR-----NAQKILVTPWDY 369
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK I+ ++ +A E +V RID W S +P H + V GR G++
Sbjct: 370 RIPK-----------IRISTQQAEALQEYRVVV-RIDSWESTSVYPNGHFVRVLGRIGDL 417
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLRN-FCIFTIDPS 523
E +I AIL EN+I + FS ++ +P PW+V EE R +LR+ +F+IDP
Sbjct: 418 EGEIAAILVENSISVAPFSEIQMNEMPVSSSKNPWKVNPEEEKKRLNLRDTHLVFSIDPK 477
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
D+DDALS+ L +G +GVHIADV++FV + D+EA+ R+T+ Y+ R+ MLP
Sbjct: 478 GCEDVDDALSVRTLPNGNLELGVHIADVTHFVAANSYTDVEARARATTYYLADRRYDMLP 537
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
+LS ++ SL GVDR A S+ W+L +++ +++IRS KL YE AQ ++DG
Sbjct: 538 SVLSADICSLLSGVDRYAVSVLWELERESFEILRVCYNKSIIRSAYKLVYEVAQGLLDGD 597
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
V + + + + S++V +I L ++++ ++ KR + GAL LE +
Sbjct: 598 ASVVDDILELKDLDERTREKKLSELVWAISKLTDIARHMRAKRDSCGALELEGVEIRVQL 657
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
D+ +D + +++ E M+LAN A+ I+ +FP ALLR+HP P +
Sbjct: 658 DDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKISESFPHQALLRQHPPPRQEFFTDL 717
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
+ S G +DT S+ +SL++A + L D ++ +L + AT M A YF +G
Sbjct: 718 QECASAKGFSIDTRSNKALAESLDKADDPL--DPIVNRLLRSMATHAMSNALYFSTGSCS 775
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAA 859
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA
Sbjct: 776 EE-EFHHYGLALDKYTHFTSPIRRYADIVVHRLLMAA 811
Score = 46.2 bits (108), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 8/76 (10%)
Query: 158 KIFAPHWSMEAVNEALEKGDAFKALYRVNAHN-RLEAYCKIEG-------VQTDVLITGI 209
K + H ME + ++ G + VN H +LEA+ +++G +Q+D+LI G
Sbjct: 220 KEYPEHLPMEVLEAGIKSGRYIQGALNVNKHRAQLEAFVRLQGFGSKETELQSDILIYGA 279
Query: 210 AAQNRAVEGDFVLIKV 225
A+NRA+ GD V +++
Sbjct: 280 RARNRAIHGDVVAVEL 295
>gi|290995709|ref|XP_002680425.1| predicted protein [Naegleria gruberi]
gi|284094046|gb|EFC47681.1| predicted protein [Naegleria gruberi]
Length = 880
Score = 269 bits (687), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 179/526 (34%), Positives = 272/526 (51%), Gaps = 79/526 (15%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
P GRVV+++ER+ W Y +++K N +Y+ P
Sbjct: 334 PVGRVVAVLERN--------------WREY-VACLEESKNNTG-------DYLLAIPIDS 371
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK+ + K K LE M L+ RI +W ++S +P + + G G++
Sbjct: 372 RIPKIRIKTKQ-----KNVLEN------MRLIV-RISDWEKKSKYPSGYYVRTLGPIGDL 419
Query: 469 EPQINAILYENAICCSG--FSPESLSCLPCVP----WEVPQEELLSRKDLR-NFCIFTID 521
+ + +L EN + S FS +LS LP V +++PQ E+ R+D+R + +ID
Sbjct: 420 DTETEGLLVENQLFTSTLPFSDLALSELPPVSSGAEFKIPQAEIQKRRDIRKTHLVCSID 479
Query: 522 PSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPM 581
P D+DDALS+++LS+G VGVHIADVSY++ LD+EA+ RST+VY++ R++ M
Sbjct: 480 PIGCEDIDDALSVKKLSNGNIEVGVHIADVSYYIKYDGYLDLEARRRSTTVYLIDRRLDM 539
Query: 582 LPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDG 641
+P LLS ++ S+ G DRL S+FW+ N G+VVD W GRT++ S L YE A +++
Sbjct: 540 IPTLLSADLCSIRQGQDRLCVSVFWEFNKEGEVVDTWYGRTILNSKYALHYEQADELLK- 598
Query: 642 KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPV-F 700
+ I +L ++ +++ KR DGAL L + + V F
Sbjct: 599 ---------------------------KDIGALQQLGTLIQKKRLKDGALELNDLEAVSF 631
Query: 701 LFDEYGTPYDSVLSGREDL--NFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRK 758
D P + ++DL + E+M+LAN A+ I +FP +A LRRHP P K
Sbjct: 632 KLDNAKNPVK--IETKDDLLIHHTVAEWMILANAYVAKKIYDSFPVAACLRRHPYPMKDK 689
Query: 759 LREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILI-NYATRPMQLASYFC 817
++ G ++D S SL++A E +D YV ++LI + TR M A YF
Sbjct: 690 FQQVIKVAGSRGFEIDLESGNSLSNSLDRA-EDPEDKYV--NLLIRSLTTRAMSEAEYFS 746
Query: 818 SGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE 863
+G D D+ HY LA YTHFTSP+RRY D+VVHR L A+ E
Sbjct: 747 TGTLPVD-DFVHYGLALQFYTHFTSPIRRYADIVVHRLLLWAINNE 791
Score = 46.2 bits (108), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 10/85 (11%)
Query: 160 FAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKI----------EGVQTDVLITGI 209
+ + +++ + L G +K + RVN +N A+ K E V VL+ G
Sbjct: 241 YQDYLTLDVIEPGLNSGKYYKGVLRVNQYNSRNAHIKTTMKQNNGIIEEDVSVRVLVEGS 300
Query: 210 AAQNRAVEGDFVLIKVDRLSLWAKM 234
A +NRAV GD V+I++ S W K+
Sbjct: 301 ADRNRAVHGDMVVIELKPKSEWKKI 325
>gi|148226384|ref|NP_001086021.1| DIS3-like exonuclease 1 [Xenopus laevis]
gi|49119586|gb|AAH73711.1| MGC83653 protein [Xenopus laevis]
Length = 961
Score = 269 bits (687), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 182/518 (35%), Positives = 267/518 (51%), Gaps = 41/518 (7%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTGRVV I++R+ RD +V F K + + + + + P
Sbjct: 246 PTGRVVGIMQRN-WRDYVVTF----------------PAKEDTETQGKNTQKVLVMPWDY 288
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK I+ ++ +A ++ V RID W S +P H + GR G +
Sbjct: 289 RIPK-----------IRISTQQAEA-LQNYRVVVRIDSWESNSLYPNGHFVRALGRAGNL 336
Query: 469 EPQINAILYENAICCSGFSPESLSCLPC----VPWEVPQEELLSRKDLR-NFCIFTIDPS 523
E +I IL EN+I + FS L+ +P PW+V EE R DLR +F+IDP
Sbjct: 337 EAEIATILVENSISLNPFSEAQLAEMPSNTHENPWQVKPEE-GDRLDLRETHLVFSIDPK 395
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
D+DDALSI L G +GVHIADV++FV T DIEA+ R+T+ Y+ R+ MLP
Sbjct: 396 GCEDVDDALSIRVLPSGDLELGVHIADVTHFVQHNTYTDIEARSRATTYYLADRRNDMLP 455
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR-WIGRTVIRSCCKLSYEHAQDIIDGK 642
++LS ++ SL VDR A S+ W+++ + + R W GRT+IRS KLSYE AQ ++DG
Sbjct: 456 LILSADLCSLLGAVDRYAVSVIWEMDCSTYEIRRVWYGRTIIRSSYKLSYEVAQQLLDG- 514
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
D+E +T E P ++ ++ + EV+ + +R GAL LE +
Sbjct: 515 -DLEPLSTEKELHPLKQDPARLQQLLWAVGKMTEVAHATRMRRNMSGALELEGVEVRVQL 573
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
E + D V ++ E M+LAN A+ I ++P ALLR HP P +E
Sbjct: 574 GEKHSIDDLVPKQPLQVHETIAECMILANHWVAKKIWESYPQHALLRLHPPPRQEFFQEL 633
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
+ G +DT S+ SL+QA + D ++ +L AT+ M A YF +G +
Sbjct: 634 KECAKARGFSIDTRSNKALADSLDQAHD--PSDPLVNQLLRMMATQAMSNARYFSTGSYT 691
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
+D ++ HY LA YTHFTSP+RRY D+VVHR L AA+
Sbjct: 692 ED-EFYHYGLALEKYTHFTSPIRRYADIVVHRLLLAAV 728
Score = 44.3 bits (103), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Query: 154 EARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHN-RLEAYCKIEG-------VQTDVL 205
E+ K + H +E + ++ G + + VN H +LE++ +++G +Q+D+
Sbjct: 136 ESNGKEYPEHLPLEILEAGIKSGRYKQGVLSVNKHRAQLESFVRLQGLGGKETDIQSDIF 195
Query: 206 ITGIAAQNRAVEGDFVLIKVDRLSLWAKMKG 236
I G +NRA+ GD V +++ S W G
Sbjct: 196 IHGTKPRNRAIHGDLVAVELLPKSEWKGRTG 226
>gi|145488516|ref|XP_001430262.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124397358|emb|CAK62864.1| unnamed protein product [Paramecium tetraurelia]
Length = 1184
Score = 269 bits (687), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 182/535 (34%), Positives = 271/535 (50%), Gaps = 64/535 (11%)
Query: 441 AARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWE 500
+A+ W + S +P ++ G G ++ + AIL EN++ + FS + +
Sbjct: 615 SAKYISWAKNSRYPYVELIKEVGVQGNIDVECEAILTENSVYDNEFSEQCKEEMKAFTHN 674
Query: 501 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 560
+E +R DLR I +IDP TA DLDDALSI L +GI +GVHIADVS+FVLP +
Sbjct: 675 SIAKERENRMDLRKEYICSIDPVTARDLDDALSINDLGNGIYEIGVHIADVSHFVLPNSE 734
Query: 561 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW-- 618
+D EA +R+TSVY++ + IPMLP +L EE+ SLN V+RLAFS+F+ + S G+V+ W
Sbjct: 735 VDKEAILRTTSVYLVHKVIPMLPRILCEELCSLNRDVERLAFSVFFKMTSEGEVL--WDS 792
Query: 619 --IGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 676
++VI+SC +LSY+ +IDG+ S GE ++ F+ + + L
Sbjct: 793 FRAAKSVIKSCAQLSYDIVNQLIDGEIQQFSQ---GEARYKVAEGFDEIVLKDKVLLLNT 849
Query: 677 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 736
+++ ++KR +G+L E SK FL + P R F+ EE+MLLAN+ +
Sbjct: 850 IAQKRREKRL-EGSLTFEKSKLRFLLNSDLFPTGYTEEKRGLAQFMVEEWMLLANQFVGK 908
Query: 737 VIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQ-----LDTSSSGQFHQSLEQAREK 791
+ +A+LR+H +P KL + GL+ LD S+S ++ + E
Sbjct: 909 KLIEYDTKTAVLRQHISPKSEKLDYYRKLLEACGLEEMAQNLDVSTSRNLKLTMNKVNEI 968
Query: 792 LKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 851
++ L IL + M+ A YF D +T+W HYAL F VYTHFTSP+RRYPD++
Sbjct: 969 ESEEIKL--ILGFRLLKLMEAAQYFVV-DETPETEWRHYALDFDVYTHFTSPIRRYPDIL 1025
Query: 852 VHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAAL 911
VHR L ALE +++ DK E R+ L
Sbjct: 1026 VHRRLQIALEQQEI---------------------------DKTG----ETRDKLKA--- 1051
Query: 912 KYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLFSCLILYLT 966
+ HCND +L R V D C +L++ +LLK V IL L
Sbjct: 1052 ------------IMQHCNDCRLNARRVSDQCDQLFLALLLKANPVEVDGYILSLN 1094
>gi|167754476|ref|ZP_02426603.1| hypothetical protein ALIPUT_02772 [Alistipes putredinis DSM 17216]
gi|167659101|gb|EDS03231.1| ribonuclease R [Alistipes putredinis DSM 17216]
Length = 757
Score = 269 bits (687), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 159/435 (36%), Positives = 229/435 (52%), Gaps = 44/435 (10%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 499
V RI +W S P ++ V GR GE +++AIL E + F + +P
Sbjct: 189 VVIRITDWALGSKSPAGELVEVLGRAGENNTEMHAILAEYGLPYH-FEQKVEDAAQAIPS 247
Query: 500 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 559
+ + + +R+D R FTIDP+ A D DDALSI ++ DG+ VGVHIADV+++V P +
Sbjct: 248 TITKADYAARRDFRKITTFTIDPADAKDFDDALSIRKIEDGVWEVGVHIADVTHYVQPRS 307
Query: 560 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 619
+D EA+ R TSVY++ R IPMLP LS E+ SL P + L FS + LN +V+D+W
Sbjct: 308 VIDTEAEERGTSVYLVDRTIPMLPEKLSNELCSLRPDEESLCFSAVFTLNEEAEVLDKWF 367
Query: 620 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 679
GRTVI S + +YE AQ II+ G+G D + +L +++
Sbjct: 368 GRTVILSDRRFTYEEAQQIIE----------TGKG-----------DFAEEVLTLNRLAQ 406
Query: 680 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE--- 736
++ RF GA+ + + F D G P +++ N L EEFMLLANK AE
Sbjct: 407 RMRKTRFKRGAVSFQREEAKFKLDAEGKPLGVYFKEQKEANQLIEEFMLLANKQVAEFCG 466
Query: 737 ---VIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDT----SSSGQFHQSLEQAR 789
V RA + + R H PN KL +F F + G + + + ++ L QA+
Sbjct: 467 HHKVNGRAVRRTMVYRVHDVPNEEKLEKFRTFVLRFGYVFKADKGRAVAKEMNKLLGQAK 526
Query: 790 EKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPD 849
++++ +++ N A R M A F S D + GHY LAFP YTHFTSP+RRYPD
Sbjct: 527 GRIEE-----NVISNLAVRAMSKA--FYSTD-----NIGHYGLAFPYYTHFTSPIRRYPD 574
Query: 850 LVVHRTLNAALEAEK 864
++VHR L LE K
Sbjct: 575 MMVHRLLARYLEGGK 589
>gi|166201906|sp|Q6GN11.2|DI3L1_XENLA RecName: Full=DIS3-like exonuclease 1
Length = 1040
Score = 268 bits (686), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 182/518 (35%), Positives = 267/518 (51%), Gaps = 41/518 (7%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTGRVV I++R+ RD +V F K + + + + + P
Sbjct: 325 PTGRVVGIMQRN-WRDYVVTF----------------PAKEDTETQGKNTQKVLVMPWDY 367
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK I+ ++ +A ++ V RID W S +P H + GR G +
Sbjct: 368 RIPK-----------IRISTQQAEA-LQNYRVVVRIDSWESNSLYPNGHFVRALGRAGNL 415
Query: 469 EPQINAILYENAICCSGFSPESLSCLPC----VPWEVPQEELLSRKDLR-NFCIFTIDPS 523
E +I IL EN+I + FS L+ +P PW+V EE R DLR +F+IDP
Sbjct: 416 EAEIATILVENSISLNPFSEAQLAEMPSNTHENPWQVKPEE-GDRLDLRETHLVFSIDPK 474
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
D+DDALSI L G +GVHIADV++FV T DIEA+ R+T+ Y+ R+ MLP
Sbjct: 475 GCEDVDDALSIRVLPSGDLELGVHIADVTHFVQHNTYTDIEARSRATTYYLADRRNDMLP 534
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR-WIGRTVIRSCCKLSYEHAQDIIDGK 642
++LS ++ SL VDR A S+ W+++ + + R W GRT+IRS KLSYE AQ ++DG
Sbjct: 535 LILSADLCSLLGAVDRYAVSVIWEMDCSTYEIRRVWYGRTIIRSSYKLSYEVAQQLLDG- 593
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
D+E +T E P ++ ++ + EV+ + +R GAL LE +
Sbjct: 594 -DLEPLSTEKELHPLKQDPARLQQLLWAVGKMTEVAHATRMRRNMSGALELEGVEVRVQL 652
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
E + D V ++ E M+LAN A+ I ++P ALLR HP P +E
Sbjct: 653 GEKHSIDDLVPKQPLQVHETIAECMILANHWVAKKIWESYPQHALLRLHPPPRQEFFQEL 712
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
+ G +DT S+ SL+QA + D ++ +L AT+ M A YF +G +
Sbjct: 713 KECAKARGFSIDTRSNKALADSLDQAHD--PSDPLVNQLLRMMATQAMSNARYFSTGSYT 770
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
+D ++ HY LA YTHFTSP+RRY D+VVHR L AA+
Sbjct: 771 ED-EFYHYGLALEKYTHFTSPIRRYADIVVHRLLLAAV 807
Score = 43.9 bits (102), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Query: 154 EARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHN-RLEAYCKIEG-------VQTDVL 205
E+ K + H +E + ++ G + + VN H +LE++ +++G +Q+D+
Sbjct: 215 ESNGKEYPEHLPLEILEAGIKSGRYKQGVLSVNKHRAQLESFVRLQGLGGKETDIQSDIF 274
Query: 206 ITGIAAQNRAVEGDFVLIKVDRLSLWAKMKG 236
I G +NRA+ GD V +++ S W G
Sbjct: 275 IHGTKPRNRAIHGDLVAVELLPKSEWKGRTG 305
>gi|350420682|ref|XP_003492589.1| PREDICTED: DIS3-like exonuclease 2-like [Bombus impatiens]
Length = 784
Score = 268 bits (686), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 155/436 (35%), Positives = 239/436 (54%), Gaps = 26/436 (5%)
Query: 439 LVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVP 498
L I +W + F + + G G+++ + NAIL E + + +S + LP
Sbjct: 217 LYLVVITDW-RKPKFAVGQIEKIIGSIGDIKAESNAILLEYDLDVTPYSLDVTKELPSSD 275
Query: 499 WEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPG 558
+ + + ++ R+D ++ CIFTIDP TA DLDD++S + L +G +GVHI+DV+++V
Sbjct: 276 YSLTENDIKDREDWKDECIFTIDPDTAVDLDDSVSCKPLENGNYEIGVHISDVTHYVEFL 335
Query: 559 TALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW 618
+ LDI+ R+T++YM MLP L +V SL+PG D+LAFS+ W++ VV+
Sbjct: 336 SPLDIQVSKRATTIYMADNIYHMLPKELC-QVCSLSPGQDKLAFSVIWEMTQDARVVNYR 394
Query: 619 IGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWP----QLYGQFEWSDVVRSIKSL 674
+TVIRSCC++SY+H Q +I+ WP + G ++ +D+ + L
Sbjct: 395 FAKTVIRSCCQMSYQHVQKMIENP---------EYNWPDNSINIDGNYKLNDLSIKVNIL 445
Query: 675 YEVSKILKDKRFTDGALRLENSKPVFLFDEY-GTPYDSVLSGREDLNFLFEEFMLLANKT 733
+ ++ ++ +RF +GALR++ K D G P + ++D N L EEFMLLAN T
Sbjct: 446 HNLAIQMRKRRFQNGALRIDQPKLCVKVDRITGLPISYNIEEQQDSNRLIEEFMLLANMT 505
Query: 734 AAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKL- 792
A + P++ALLR H P+ R L + K G+ LD SS H S+++ E L
Sbjct: 506 VATHLYNVIPETALLRNHREPSKRILSTTQEMLQKFGIHLDIKSSTSLHASMKRCEEALE 565
Query: 793 -KDD-------YVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPL 844
+DD Y + ++ N +R M A+Y CS K + + HYAL VYTHFTSP+
Sbjct: 566 TEDDERRIIMKYRMM-VVNNLCSRAMTRATYICSSTVKAEEELRHYALNISVYTHFTSPI 624
Query: 845 RRYPDLVVHRTLNAAL 860
RRY D VVHR L + L
Sbjct: 625 RRYSDCVVHRLLYSTL 640
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%)
Query: 170 NEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEGDFVLIKVDRLS 229
NE + + RVN NR AY Q D+LI G+ +NRA +GDFV+ ++++
Sbjct: 90 NENSNETQYIEGQLRVNRWNREYAYLSFSDDQCDLLIIGLRDRNRAFDGDFVVARINQPE 149
Query: 230 LWAKMKGFSNNSSIV 244
W +G++ + +V
Sbjct: 150 KWKMHQGYNQKTGVV 164
>gi|398017891|ref|XP_003862132.1| ribonuclease II-like protein, putative [Leishmania donovani]
gi|322500361|emb|CBZ35438.1| ribonuclease II-like protein, putative [Leishmania donovani]
Length = 942
Score = 268 bits (686), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 213/650 (32%), Positives = 323/650 (49%), Gaps = 90/650 (13%)
Query: 345 PTKRPTGRVVSIIERS-PRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQL 403
P KRP GRV+ I++R PR V + NQ +G + ++ Y +
Sbjct: 155 PEKRPLGRVIRILKRCLPRLH--VARIADNQVHPGEG--------------LQEKYYYRF 198
Query: 404 TPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEME-------LVAARIDEWNEESPFPQA 456
P + YP++ V D+ + + ++ +E L R+ P A
Sbjct: 199 RPFNQLYPQLTVQGCDIMAAYHANISTSLFSLALEHGENGEILTTPRV---------PNA 249
Query: 457 HVLHVFGRGGEVEPQINAILYENAICCS------GFSPESLSCLPCVPWEVPQEELLS-- 508
+ V G+ A +AIC S FS E+ +C+ + +P L+
Sbjct: 250 LLCKVHSFLGDASTMAVA---SHAICTSCNVSNEPFSEEAEACV-LKDFTIPSPAELADM 305
Query: 509 -RKDLRNF-CIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQ 566
R+DLR+ + TIDP+TA DLDDALSI+ DG VGVHIADVS+FVLP TALD EAQ
Sbjct: 306 GRRDLRDSEFVLTIDPATARDLDDALSIKPRKDGGYHVGVHIADVSHFVLPRTALDEEAQ 365
Query: 567 VRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD--------RW 618
RS S Y++ R IPMLP LSEE SLNPG D+ AFS ++ + G ++ W
Sbjct: 366 RRSNSTYLVDRVIPMLPSRLSEEYCSLNPGEDKFAFSGLFEFDRDGHLISEAATGEKCEW 425
Query: 619 IGRTVIRSCCKLSYEHAQDIIDGK----FDV-ESSNTLGEGWPQLYGQFEWSDVVRSIKS 673
G++VIRS C+L+YE AQ I+DG DV ++++ LG G + V +S+ +
Sbjct: 426 FGQSVIRSRCRLAYEQAQQILDGDDTVVLDVAQAASDLGIG-----EEAARKKVKQSVTN 480
Query: 674 LYEVSKILKDKRFTDGALRLENSKPVFLFD--EYGTPYDSVLSGRE-DLNFLFEEFMLLA 730
L+ ++ L+ + DG + + N++ F FD E +P S + N+L EEFMLLA
Sbjct: 481 LFALASKLRQQSLRDGRVVIGNTRLAFRFDRNEVNSPPTSFFVQEQIQANWLVEEFMLLA 540
Query: 731 NKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQARE 790
N+ A+ I + P ALLRRH P +K+R S GL SS + + ++ ++
Sbjct: 541 NQRVAQKIVQYIPYGALLRRHKPPQPQKMRRLRTALSHRGLPTGGSSGQELQRMIDTIKK 600
Query: 791 KLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDL 850
+ D+ L+ Y+ +A+ + + D + H+A+A P YTHFTSP+RRY DL
Sbjct: 601 DHRGDFHTVCELLKYSL----MAAEYIANDPTEKDIRSHFAVAAPWYTHFTSPIRRYCDL 656
Query: 851 VVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAE--SLEGREAL-S 907
+VHR L ALE E+ + + +P H + R IF A + L+ RE
Sbjct: 657 MVHRQLRVALELERCMEEAQMEMPNAPH-PALETRPGDCIFDPTRAVDVHKLKTRELFYP 715
Query: 908 VAALKYGVPCADILVNVATHCNDRKLACRNVKDACVK----LYMWILLKK 953
++AL++ + TH N+ +L R+ D ++ LY+ L K+
Sbjct: 716 LSALEH----------IVTHANECRLNSRSAGDMSLEYSLCLYLLALQKR 755
>gi|343424768|emb|CBQ68306.1| probable DIS3 3`-5` exoribonuclease required for 3` end formation
of 5.8S rRNA [Sporisorium reilianum SRZ2]
Length = 1009
Score = 268 bits (686), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 190/538 (35%), Positives = 269/538 (50%), Gaps = 65/538 (12%)
Query: 342 SSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYI 401
SS +PTG+VV I+ R+ R V ++VN N S+LS + +
Sbjct: 383 SSRGEPQPTGKVVGIVRRNWR--SYVAHVDVNSV-------------NSSALSSLGAQTV 427
Query: 402 QLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHV 461
TP K P++ + + D I +++ LVA +D W S +P H +
Sbjct: 428 FATPVDRKLPRIRIRTRQARDLIGQKI----------LVA--LDAWRPTSRYPDGHFVRA 475
Query: 462 FGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEELLSRK-----DLRN 514
G+ E + ++L E+ + FS L CLP W VP +++ R D+R+
Sbjct: 476 LGQAESKEAEQESLLLEHDVPYRPFSKAILDCLPVEGDSWVVPPKDMTHRAWRDRVDMRD 535
Query: 515 FCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYM 574
I +IDP D+DDAL ++L +G GVHIADVSYFV P +D EA R T+VY+
Sbjct: 536 EIICSIDPPGCQDIDDALHAKQLPNGNIEAGVHIADVSYFVRPDNPMDAEAASRGTTVYL 595
Query: 575 LQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEH 634
+ ++I MLP LL + SL P V+RLAFS W++ ++V+ ++VI S +YE
Sbjct: 596 VDKRIDMLPHLLGTNLCSLRPYVERLAFSAVWEMTPEAEIVNVRFHKSVIASKAAFTYEE 655
Query: 635 AQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLE 694
AQ D +S + +SI+ L ++K LK KR GAL L
Sbjct: 656 AQLRKDDPSKTDS-------------------ITQSIRLLNSLAKKLKQKRMDAGALNLA 696
Query: 695 NSKPVFLFD--EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH- 751
+ + D E P D + N L EEFMLLAN + AE I FP +A+LRRH
Sbjct: 697 SPEVRIHLDSSESAAPIDVEQKEMRETNSLVEEFMLLANVSVAERIYDVFPMTAVLRRHL 756
Query: 752 --PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATR 808
P N L++ + GL+LD SSSG SL++ + KD F+ L+ ATR
Sbjct: 757 PPPRTNFETLQDI--LLKRRGLELDVSSSGALAASLDKCVDA-KD--ATFNTLVRIMATR 811
Query: 809 PMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
M A YFCSG DT + HY LA +YTHFTSP+RRY D++ HR L AA+ E L+
Sbjct: 812 CMLSAEYFCSGSVARDT-FNHYGLAAGMYTHFTSPIRRYADVLAHRQLAAAINYEPLH 868
Score = 43.5 bits (101), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%)
Query: 153 SEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQ 212
SE R ++ H V ++ G + + N +N LEA + + +L+ G +
Sbjct: 255 SEKRAVLYPEHLPQNQVTAGVKSGQLLQGFFNANPYNYLEATVRSGQLTRPILLVGRESM 314
Query: 213 NRAVEGDFVLIKV 225
NRAV+GD V +++
Sbjct: 315 NRAVDGDIVAVQM 327
>gi|213408713|ref|XP_002175127.1| mitotic control protein dis3 [Schizosaccharomyces japonicus yFS275]
gi|212003174|gb|EEB08834.1| mitotic control protein dis3 [Schizosaccharomyces japonicus yFS275]
Length = 969
Score = 268 bits (686), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 181/529 (34%), Positives = 266/529 (50%), Gaps = 65/529 (12%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PT RVV I++R+ W Y G + NR+ S ++ + LTP
Sbjct: 360 PTARVVGILKRN--------------WRPYVGHVDMASVANRTGSS---QQSVLLTPMDR 402
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK+ + + + +R + +D W+ +S +P+ H + G
Sbjct: 403 RVPKIRFRTRQISRLLGQR------------IVVSVDNWDIDSRYPEGHFVRALGEMETK 450
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEE----LLSRKDLRNFCIFTIDP 522
E + A+L E + F L CLP W VPQ++ R D R + +IDP
Sbjct: 451 EAETEALLLEYDVQYRPFPKSVLDCLPAEGHEWRVPQDKSDPLWHKRADFRELLVCSIDP 510
Query: 523 STATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPML 582
D+DDAL L +G VGVHIADV++FV P TA+D EA R T+VY++ ++I ML
Sbjct: 511 PGCQDIDDALHARPLPNGNYEVGVHIADVTHFVKPSTAMDAEASSRGTTVYLVDKRIDML 570
Query: 583 PVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
P+LL ++ SL P ++R AFS W+++ +VV+ ++VI S SY AQ ID K
Sbjct: 571 PMLLGTDLCSLRPRIERFAFSCIWEMDENANVVNVSFTKSVISSKEAFSYAEAQARIDDK 630
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFL 701
++ + L EG ++ L +SK LK +R +GAL L + + V +
Sbjct: 631 ---KAQDPLTEG----------------MRILLRLSKKLKQRRLDNGALNLASPEVKVQM 671
Query: 702 FDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAP---NMRK 758
+E P D + + N L EEFMLLAN + A+ I FP +A+LRRH AP N
Sbjct: 672 DNETSDPMDIEIKQLLETNSLVEEFMLLANISVAQKIYETFPQTAVLRRHAAPPASNFEA 731
Query: 759 LREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFC 817
L++ C +QL SS SL++ + D Y F+ L+ TR M A YFC
Sbjct: 732 LQDILHVCK--DMQLKCDSSKALAHSLDECSDN-ADPY--FNTLLRILTTRCMLSAEYFC 786
Query: 818 SGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
SG F D+ HY LA P+YTHFTSP+RRY D++ HR L A+++ E L+
Sbjct: 787 SGTFA-YPDFRHYGLASPIYTHFTSPIRRYADVLAHRQLAASIDYETLH 834
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
+F HWSM + ++ G+ K + +N +N LE + G V+I G + NR+V+G
Sbjct: 245 LFTQHWSMSRMLTCIKNGEIHKGIVNINPYNFLEGTVSVLGYDKPVIILGRSNLNRSVQG 304
Query: 219 DFVLIKVDRLSLWAKMKGFSNNSSIVEDSN 248
D V I++ S W + S I D N
Sbjct: 305 DLVAIEILPQSEWK-----TETSEIASDEN 329
>gi|390945305|ref|YP_006409066.1| RNAse R [Belliella baltica DSM 15883]
gi|390418733|gb|AFL86311.1| RNAse R [Belliella baltica DSM 15883]
Length = 733
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 181/546 (33%), Positives = 269/546 (49%), Gaps = 74/546 (13%)
Query: 326 QQNDGMNAIERLSAMISSYPTKRPTGR----VVSIIERSPRRDGIVGFLNVNQWFNYKGG 381
++ D NA++ + YP K TGR V+ ++ERS RD VG + ++ F
Sbjct: 120 KEADLKNALDGDRVRVMVYPLKGHTGRMEGKVLELLERS--RDEFVGRVEISPRF----- 172
Query: 382 SRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVA 441
+ VPD + KM D + + G A ++V
Sbjct: 173 ----------AFVVPD------------FKKM------HHDIFVHKGDLGGAEHNQKVVV 204
Query: 442 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSC-LPCVPWE 500
++ EW E P V V G+ GE E +I++I+ E + PE ++ + E
Sbjct: 205 -KMTEWREGDKNPTGKVTRVLGKAGEHEVEIHSIMAEFGLPFE--YPEDITKEAEAISDE 261
Query: 501 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 560
+ +EE+ +RKD R FTIDP+ A D DDA+S L +G +GVHIADV+++V P T
Sbjct: 262 ISKEEIKNRKDFRGITTFTIDPADAKDFDDAISYRVLDNGNFEIGVHIADVTHYVKPKTG 321
Query: 561 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIG 620
L+ EA R+TSVY++ R IPMLP LS + SL P D+L FS ++++ DVV WIG
Sbjct: 322 LEKEAYDRATSVYLVDRTIPMLPERLSNGLCSLRPNEDKLTFSCVFEMDENADVVKHWIG 381
Query: 621 RTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKI 680
RTVI S + +YE AQ+ ID + D + L +++K
Sbjct: 382 RTVIHSDRRFAYEQAQENIDN---------------------QSGDFFEELTFLNDMAKK 420
Query: 681 LKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVI-- 738
L+ +RF GA+ E + F DE GTP + R+D++ + EEFMLLAN+T AE I
Sbjct: 421 LRRRRFDKGAVNFETVEVKFQLDEKGTPLGLFVKERKDIHKMIEEFMLLANRTVAEFIFD 480
Query: 739 ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVL 798
D+ + R H P++ +L F F K G ++ + ++L Q ++++
Sbjct: 481 KNKGADTFVYRVHDHPDLERLETFSNFAKKFGHEIKVGEGNRISKALNQLMDEIQGKPEQ 540
Query: 799 FDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNA 858
++L A R M A Y GH+ LAF YTHFTSP+RRYPD++VHR L
Sbjct: 541 -NVLEQLAIRSMAKAIYTVEPK-------GHFGLAFKHYTHFTSPIRRYPDMMVHRLLQH 592
Query: 859 ALEAEK 864
L+ K
Sbjct: 593 YLDGGK 598
>gi|348530324|ref|XP_003452661.1| PREDICTED: DIS3-like exonuclease 1-like [Oreochromis niloticus]
Length = 1044
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 182/526 (34%), Positives = 272/526 (51%), Gaps = 43/526 (8%)
Query: 346 TKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTP 405
T PTGR+V I++R+ RD +V F + G + ++ ++ L++P + I
Sbjct: 318 TPLPTGRIVGILQRN-WRDYVVTFPT-------RDGIQSQSRNSQRILTIPWDQRI---- 365
Query: 406 THPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
PK I+ ++ +A ++ V RID W S +P H + V GR
Sbjct: 366 -----PK-----------IRISTQQAEA-LQDHRVVVRIDSWESTSFYPNGHSVRVLGRA 408
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPC----VPWEVPQEELLSRKDLRN-FCIFTI 520
GE+E ++ IL EN I FS L +P PW V E+ R+DLR+ +F+I
Sbjct: 409 GELETEVQTILLENCIHILPFSDAQLREMPVNSLEKPWTVDPSEVAERRDLRDSHLVFSI 468
Query: 521 DPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIP 580
DP D+DD LS+ +L D +GVHIADV++FV G+ D+EA+ R+T+ Y+ R+
Sbjct: 469 DPRGCEDVDDTLSVRKLPDRRLELGVHIADVTHFVKEGSLTDLEARSRATTYYLADRRYD 528
Query: 581 MLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDII 639
MLP +LS ++ SL G DR A S+ W+L++ +V + W GRT+IRS +L YE AQ ++
Sbjct: 529 MLPAILSADLCSLLGGADRYAMSVLWELDAESLEVQEVWYGRTLIRSSYQLHYELAQALL 588
Query: 640 DG-KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKP 698
+G + +V LG PQ + + + +++ L V++ L+ KR GAL LE +
Sbjct: 589 NGEQVEVLELANLG---PQERDS-KVAQLTEALEMLTHVARHLRAKRDRGGALELEGVEV 644
Query: 699 VFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRK 758
DE V +++ E M+ AN A I AFP+ ALLRRHP P
Sbjct: 645 GAQLDEERNITALVPRQPLEVHETVAECMIYANHWVARKIQEAFPNQALLRRHPPPQQEL 704
Query: 759 LREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCS 818
+ G +DT S+ SL++A + D ++ + AT M A YF +
Sbjct: 705 FNQLVDTAKAKGFTIDTRSNKALAASLDRAVD--PQDPLVNRLFRMMATTAMSQALYFST 762
Query: 819 GDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
G D + HY LA YTHFTSP+RRY D+VVHR L AAL+ E+
Sbjct: 763 GAHPQD-QYYHYGLALDRYTHFTSPIRRYADIVVHRLLTAALDMER 807
>gi|401424784|ref|XP_003876877.1| putative ribonuclease II-like protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322493121|emb|CBZ28406.1| putative ribonuclease II-like protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 941
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 217/645 (33%), Positives = 324/645 (50%), Gaps = 80/645 (12%)
Query: 345 PTKRPTGRVVSIIERS-PRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQL 403
P KRP GRV+ I++R PR V + NQ + G R + ++ Y +
Sbjct: 154 PEKRPLGRVIRILKRCLPRLH--VARIADNQ---VQPGER-----------LQEKYYYRF 197
Query: 404 TPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNE----ESP-FPQAHV 458
P + YP++ + D+ + A I M L + ++ +P P A +
Sbjct: 198 RPFNQLYPQLTLQGCDI-------MAAYHAHINMSLFSLALERGGNGEILTTPRVPNALL 250
Query: 459 LHVFGRGGEVEPQINAILYENAICCS------GFSPESLSCLPCVPWEVPQE-EL--LSR 509
V G+ A +AIC S FS E+ +C+ + +P EL + R
Sbjct: 251 CKVHSFLGDASTMAVA---SHAICTSCNVSNEPFSEEAEACV-LKDFTIPSAAELVDMGR 306
Query: 510 KDLRNF-CIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVR 568
+DLR+ + TIDP+TA DLDDALSI+ DG VGVHIADVS+FVLP TALD EAQ R
Sbjct: 307 RDLRDSEFVLTIDPATARDLDDALSIKPRKDGGYHVGVHIADVSHFVLPRTALDEEAQRR 366
Query: 569 STSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD--------RWIG 620
S S Y++ R IPMLP LSEE SLNPG D+ AFS ++ + G ++ W G
Sbjct: 367 SNSTYLVDRVIPMLPSRLSEEYCSLNPGEDKFAFSGLFEFDRDGHLISEAATGEKCEWFG 426
Query: 621 RTVIRSCCKLSYEHAQDIIDGK----FDV-ESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 675
++VIRS C+L+YE AQ I+DG DV +++ LG G + + V +S+ +L+
Sbjct: 427 QSVIRSRCRLAYEQAQQILDGDDTVVLDVAQAAADLGIG-----EEAARNKVKQSVANLF 481
Query: 676 EVSKILKDKRFTDGALRLENSKPVFLFD--EYGTPYDSVLSGRE-DLNFLFEEFMLLANK 732
+++ L+ + DG + + N++ F F+ E +P S + N+L EEFMLLAN+
Sbjct: 482 KLASKLRQQSLRDGRVVIGNTRLAFRFERNEVNSPPTSFFVQEQIQANWLVEEFMLLANQ 541
Query: 733 TAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKL 792
A+ I + P ALLRRH P +K+R A S GL SS + + ++ ++
Sbjct: 542 RVAQKIVQFIPYGALLRRHKPPKPQKMRRLRAALSHRGLPTGGSSGQELQRIIDTIKKDH 601
Query: 793 KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 852
+ D+ L+ Y+ +A+ + + D + H+A+A P YTHFTSP+RRY DL+V
Sbjct: 602 RGDFHTVCELLKYSL----MAAEYIANDPTEKDIRSHFAVAAPWYTHFTSPIRRYCDLMV 657
Query: 853 HRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALK 912
HR L ALE E+ + + +P H V R GIF A + L L
Sbjct: 658 HRQLRVALELERCMEEAQMEMPNTPH-PAVETRPGDGIFDPTCAVDV----NKLKTRDLF 712
Query: 913 YGVPCADILVNVATHCNDRKLACRNVKDACVK----LYMWILLKK 953
Y L ++ TH N+ +L R+ D ++ LY+ L K+
Sbjct: 713 YP---HSALEHIVTHANECRLNSRSAGDMSLEYSLCLYLLALQKR 754
>gi|380015637|ref|XP_003691806.1| PREDICTED: exosome complex exonuclease RRP44-like [Apis florea]
Length = 971
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 183/556 (32%), Positives = 274/556 (49%), Gaps = 60/556 (10%)
Query: 314 STSDSTEKVSSSQQNDGMNAIERLSAMISSYPT-KRPTGRVVSIIERSPRRDGIVGFLNV 372
S SD + +D + + L ISS K PTG++V II R+ R+ + +
Sbjct: 296 SPSDIVLQDEEETDDDALETKKVLDKFISSNKMEKSPTGKIVGIIRRNWRQ-----YCGI 350
Query: 373 NQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGD 432
Q N +G R P K PK+ + + K+R+
Sbjct: 351 LQPSNIEGNVRH-----------------LFVPAERKIPKIRIETRQYGMLSKQRI---- 389
Query: 433 ATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLS 492
+VA ID W S +P H + G G+ + IL E+ I S FS LS
Sbjct: 390 ------IVA--IDSWPRNSRYPLGHFVRALGEIGDKTTENEVILLEHDIPHSRFSDAVLS 441
Query: 493 CLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVS 552
LP +PW + +L+ R+D R+ I ++DP TD+DDAL LS+G VGVHIADV+
Sbjct: 442 SLPKMPWCITDSDLVQREDFRHLDICSVDPPGCTDIDDALHCRYLSNGNLEVGVHIADVT 501
Query: 553 YFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAG 612
+F+ PGTALD EA +RST+VY++ +I MLP LLS + SL +RL FS W+++
Sbjct: 502 HFMRPGTALDKEAALRSTTVYLVDTRIHMLPDLLSSNLCSLREKEERLTFSCIWEMDEDA 561
Query: 613 DVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIK 672
++++ +++I S ++Y+ AQ ID DV ++L +S++
Sbjct: 562 NIINTRYCKSIIYSRAAMTYDEAQLKID---DVSQQDSLS----------------KSLR 602
Query: 673 SLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLAN 731
+L ++K LK +R +GAL L + + F D E P D + N + EEFMLLAN
Sbjct: 603 NLNSLAKKLKKRRLENGALVLASPEIRFQVDCETHDPIDVEAKKLRETNSMVEEFMLLAN 662
Query: 732 KTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREK 791
+ A I FP+ A+LRRHP P G ++ +S + +SL+
Sbjct: 663 ISVATKILEEFPECAILRRHPEPPPSNFEPLIKAAKNQGFIINVNSGKELAESLDNCH-- 720
Query: 792 LKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDL 850
K+ F+ ++ TR M A YF SG +++ HY LA P+YTHFTSP+RRY D+
Sbjct: 721 -KESNPYFNTMLRILTTRCMMQAIYFISG-MHQQSEYYHYGLACPIYTHFTSPIRRYADV 778
Query: 851 VVHRTLNAALEAEKLY 866
+VHR L + A+ Y
Sbjct: 779 MVHRLLAVCIGADATY 794
Score = 40.8 bits (94), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 153 SEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQ 212
SE R + F H + +++ ++ G + + + N LE + ++G + + I G
Sbjct: 217 SEGR-EFFPCHLTPSEIHDGIKYGKLLQGTFTASKENFLEGFVNVDGFEKTIFIQGRNNL 275
Query: 213 NRAVEGDFVLIKVDRLSLWA 232
NRAV+GD + +++ W+
Sbjct: 276 NRAVDGDIIALEILPEDQWS 295
>gi|169623574|ref|XP_001805194.1| hypothetical protein SNOG_15030 [Phaeosphaeria nodorum SN15]
gi|160705007|gb|EAT77573.2| hypothetical protein SNOG_15030 [Phaeosphaeria nodorum SN15]
Length = 999
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 196/586 (33%), Positives = 282/586 (48%), Gaps = 70/586 (11%)
Query: 293 EAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGR 352
+A + ++IE E N + D VS ++ ++R+ ++ +PT R
Sbjct: 340 KAPSTKIIEEETLN--KNDNAEAEDGENVVSEKERKALQEEVKRVHGQ-TAEGKPQPTAR 396
Query: 353 VVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPK 412
+V I +R+ W Y G +D+ ++ S S ++ + L P + PK
Sbjct: 397 IVGIAKRN--------------WRQYVGHIDRDSVRSSSKTSRA-QQTVFLVPMDKRIPK 441
Query: 413 MVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG----RGGEV 468
+ + + + + +R + A ID W+++S +P H + G +G E
Sbjct: 442 IRIRTRQAGELLGQR------------ILATIDSWDKDSRYPVGHFVRSLGELESKGAET 489
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEE----LLSRKDLRNFCIFTIDP 522
E A+L E + F L CLP W+VP RKDLR+ + +IDP
Sbjct: 490 E----ALLLEYDVQYKPFPKTVLDCLPAEGHDWKVPASPEDPGWKGRKDLRDLLVCSIDP 545
Query: 523 STATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPML 582
D+DDAL +L +G VGVHIADVS+FV P A+D EA R T+VY++ ++I ML
Sbjct: 546 VGCVDIDDALHATKLPNGNFAVGVHIADVSHFVKPNNAMDKEASQRGTTVYLVDKRIDML 605
Query: 583 PVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
P+LL ++ SL P V+R AFS+ W++ D+V ++VIRS SYE AQ ID K
Sbjct: 606 PMLLGTDLCSLKPYVERYAFSVLWEITPDADIVKSEFTKSVIRSREAFSYEQAQIRIDDK 665
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFL 701
+ D+ +++L +SK LK KR GAL L + + V
Sbjct: 666 -------------------SQQDDLTNGMRTLLMLSKKLKQKRMDAGALNLASPEVKVRT 706
Query: 702 FDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLRE 761
E P D D N L EEFMLLAN + A AFP +ALLRRH AP E
Sbjct: 707 ESETSDPVDVETKKLLDTNSLVEEFMLLANISVAARNYEAFPQTALLRRHAAPPKTNFEE 766
Query: 762 F-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSG 819
K GL+L T SS SL+ + F+ L+ ATR M A YFC+G
Sbjct: 767 LGNQLKIKKGLELKTDSSKALADSLDTC---VDPKNPFFNTLVRIMATRCMMSAEYFCAG 823
Query: 820 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 865
+ ++ HY LA +YTHFTSP+RRY DL HR L AA+E E+L
Sbjct: 824 T-QAYPEFRHYGLASEIYTHFTSPIRRYADLEAHRQLAAAIEYEQL 868
>gi|340914648|gb|EGS17989.1| exosome complex exonuclease-like protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 986
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 193/578 (33%), Positives = 286/578 (49%), Gaps = 64/578 (11%)
Query: 298 EMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERL-SAMISSYPTKRPTGRVVSI 356
++IE E +P +ST+ VS ++ ++R+ S +P +PT RVV +
Sbjct: 329 QVIEEEAIT--KNENPDAEESTDLVSEKERKALQEEVKRMHSKTTEGHP--QPTARVVGV 384
Query: 357 IERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVL 416
I+R+ R+ VG ++ + RK ++ + + P + PK+ +
Sbjct: 385 IKRNWRQ--YVGHIDQSSISQSAQQGRK-------------QDSVFVIPMDRRIPKIRLR 429
Query: 417 VKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAIL 476
+ + + + KR+ LVA ID W+ S P H++ G + A+L
Sbjct: 430 TRQVAELVGKRI----------LVA--IDAWDRSSRHPTGHLIRSLGEMETNAAETEALL 477
Query: 477 YENAICCSGFSPESLSCLP--CVPWEVPQEE----LLSRKDLRNFCIFTIDPSTATDLDD 530
E + F L CLP W VP+++ R+DLR+ I +IDP D+DD
Sbjct: 478 LEYDVQYRPFPKTVLDCLPKEGHDWRVPEDKNDPGWRDREDLRHLLICSIDPIGCQDIDD 537
Query: 531 ALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEV 590
AL L +G VGVHIADVS+FV P A+D+EA +R T+VY++ ++I MLP LL ++
Sbjct: 538 ALHSRPLPNGNFEVGVHIADVSHFVRPNNAMDLEASIRGTTVYLVDKRIDMLPTLLGTDL 597
Query: 591 GSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNT 650
SL P V+R AFS+ W+L D+V ++VI+S SYE AQ +D
Sbjct: 598 CSLKPYVERYAFSVLWELTPDADIVSVRFTKSVIKSREAFSYEQAQMRVDD--------- 648
Query: 651 LGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFLFDEYGTPY 709
G ++ D+ +SI++L +S+ LK KR GAL L + + + + E P
Sbjct: 649 ---------GSYQ-DDLTKSIRTLLALSRKLKQKRMDAGALSLSSPEVKIHMESETSDPI 698
Query: 710 DSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF-EAFCSK 768
D L EEFMLLAN + A I AFP +A+LRRH AP E K
Sbjct: 699 DIKTKKHLPTMSLVEEFMLLANISVARKIYEAFPQTAILRRHAAPPKTNFDELANQLRVK 758
Query: 769 HGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDW 827
GL+L SS SL++ + + F+ L+ ATR M A YFCSG + ++
Sbjct: 759 RGLELSVESSKALADSLDRC---VDPNEPFFNTLVRIMATRCMMAAEYFCSGT-QAYPEF 814
Query: 828 GHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 865
HY LA +YTHFTSP+RRY DLV HR L AA+ E +
Sbjct: 815 RHYGLASEIYTHFTSPIRRYADLVAHRQLAAAIGYEAI 852
Score = 42.7 bits (99), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 38/67 (56%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
++ ++SM + ++ G + ++ V+ +N LE ++ Q +LI G NRA++G
Sbjct: 251 LYPEYYSMSKMMTGIKNGLLHQGIFNVSPYNYLEGSIRVPAFQKPLLILGRENINRAIDG 310
Query: 219 DFVLIKV 225
D V+++V
Sbjct: 311 DLVVVEV 317
>gi|406663904|ref|ZP_11071913.1| Ribonuclease R [Cecembia lonarensis LW9]
gi|405551826|gb|EKB47447.1| Ribonuclease R [Cecembia lonarensis LW9]
Length = 731
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 157/430 (36%), Positives = 231/430 (53%), Gaps = 38/430 (8%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 499
V +I EW EE P ++ V G+ GE E +I++I+ E + + E +P
Sbjct: 202 VVVKITEWREEDKNPTGKIVRVLGKAGEHEVEIHSIMAEFGLPFE-YPQEIEEEANAIPE 260
Query: 500 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 559
E+P +E+ +R+D+R+ FTIDP A D DDA+S +L +G +GVHIADV+++V P T
Sbjct: 261 EIPTDEIKNRRDMRDIPTFTIDPVDAKDFDDAISYRKLENGNYEIGVHIADVTHYVKPKT 320
Query: 560 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 619
L+ EA R+TSVY++ R IPMLP LS + SL P D+L FS ++++ DV++ WI
Sbjct: 321 KLEQEAYDRATSVYLVDRTIPMLPERLSNGLCSLRPNEDKLTFSCVFEMDENADVLNHWI 380
Query: 620 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 679
GRTV S + +YE AQ+ ID + EG D + + L E++K
Sbjct: 381 GRTVTHSDRRFAYEEAQENIDKQ----------EG-----------DFYQELTFLNELAK 419
Query: 680 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVI- 738
++ +RF GA+ E + F D+ G P ++ R+D++ L EEFMLLAN+T AE I
Sbjct: 420 KIRKRRFDKGAINFETVEVKFKLDDKGIPLGLMIKERKDIHKLIEEFMLLANRTVAEFIY 479
Query: 739 -ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYV 797
D+ + R H P++ KL F F + G + S + ++L Q L D+ V
Sbjct: 480 NRNKGKDTFVYRIHDFPDIEKLETFSTFAKRFGHDIKISEGTKISKALNQ----LMDEIV 535
Query: 798 ---LFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 854
++L A R M A Y H+ LAF YTHFTSP+RRYPD++VHR
Sbjct: 536 GKPEQNVLEQLAIRSMAKAKYTTEPK-------SHFGLAFKHYTHFTSPIRRYPDMMVHR 588
Query: 855 TLNAALEAEK 864
L L+ K
Sbjct: 589 LLQHYLDGGK 598
>gi|242005176|ref|XP_002423448.1| Exosome complex exonuclease RRP44, putative [Pediculus humanus
corporis]
gi|212506526|gb|EEB10710.1| Exosome complex exonuclease RRP44, putative [Pediculus humanus
corporis]
Length = 957
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 180/522 (34%), Positives = 266/522 (50%), Gaps = 73/522 (13%)
Query: 347 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 406
K+PTG +V II+R +W Y G N+S L R P
Sbjct: 328 KKPTGIIVGIIKR--------------KWRQYCGIL------NKSLLENATRHI--FVPA 365
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 466
K PK+ ++ K + + + ++V ID W P P G
Sbjct: 366 ERKIPKVRIITK-----------QSEFLMSQKIVVV-IDSW----PRPI----------G 399
Query: 467 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 526
+ E + +L E+ + S FS LS LP +PW + +++L +R DLR+ I ++DP T
Sbjct: 400 DKETENEVLLLEHDVPHSKFSEAVLSFLPELPWIITEDDLKNRVDLRHLDICSVDPPGCT 459
Query: 527 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 586
D+DDAL +L +G VG+HIADV++F+ PGTALD EA +R T+VY++ ++I M+P LL
Sbjct: 460 DIDDALHCRKLDNGNFEVGIHIADVTHFIKPGTALDKEAALRGTTVYLVDKRIDMVPELL 519
Query: 587 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 646
S + SL DR AFS ++ G +++ ++VIRS ++YE AQ ID K
Sbjct: 520 SSNLCSLRENEDRFAFSCIVEMTKKGKILNTKFHKSVIRSRKAMTYEEAQLKIDDK---- 575
Query: 647 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EY 705
+ +V +S++ L ++KI+K KR +GAL L + + FL D E
Sbjct: 576 ---------------KQNDNVTQSLRWLNNLAKIIKKKRLDNGALVLASPEVKFLMDSET 620
Query: 706 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAF 765
P D D N + EEFMLLAN + AE I + FP+ A+LRRHP P +
Sbjct: 621 HDPLDVEAKKIRDTNSMIEEFMLLANISVAEKIFKDFPECAVLRRHPKPPLSNFEPLIKA 680
Query: 766 CSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDD 824
+ + SLE+A +K + F+ ++ ATR M A YF SG FK++
Sbjct: 681 GRVQNFDISVDTGKSLSVSLEKA---VKPNNPYFNTMLKILATRCMMQAVYFSSGMFKEE 737
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
D+ HY LA P+YTHFTSP+RRY D++VHR L ++ A+ Y
Sbjct: 738 -DFFHYGLACPIYTHFTSPIRRYADIIVHRLLAVSVNADSTY 778
Score = 40.4 bits (93), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 37/74 (50%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
++ H++ +++ ++ + N LE ++EG + VL+ G A NRAV+G
Sbjct: 219 LYPCHYTPNEIHQGIKNKSLLYGQFFAQRDNFLEGTVRVEGQELSVLVQGRKALNRAVDG 278
Query: 219 DFVLIKVDRLSLWA 232
D V +K+ S W
Sbjct: 279 DTVAVKLLPESQWV 292
>gi|258568742|ref|XP_002585115.1| mitotic control protein dis3 [Uncinocarpus reesii 1704]
gi|237906561|gb|EEP80962.1| mitotic control protein dis3 [Uncinocarpus reesii 1704]
Length = 1042
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 191/560 (34%), Positives = 277/560 (49%), Gaps = 66/560 (11%)
Query: 317 DSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWF 376
+ E V + ++ + R + S+ +PT RVV +I+R+ R+ VG
Sbjct: 349 EENEAVVTEKERRALQEDVRKAHGTSAEGRAQPTARVVGVIKRNWRQ--YVG-------- 398
Query: 377 NYKGGS-RKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATI 435
N GGS +A R ++ + + P + PK+ + + + + +R
Sbjct: 399 NIDGGSFSAEASSGRR------QQTVFVIPMDKRVPKIRIRTRQASELLGQR-------- 444
Query: 436 EMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP 495
+ ID W+ +S +P H + G + A+L E + FS L+CLP
Sbjct: 445 ----ILITIDSWDRDSRYPTGHYVRSLGELETKAAETEALLLEYDVQYKPFSQAVLNCLP 500
Query: 496 --CVPWEVPQEE----LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIA 549
W+VP+ RKDLR+ + +IDP D+DDAL L +G VGVHIA
Sbjct: 501 PEGHDWKVPESLNDPLWKDRKDLRDLLVCSIDPPGCQDIDDALHARPLPNGNFEVGVHIA 560
Query: 550 DVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLN 609
DVS+FV P ++D EA +R T+VY++ ++I MLP+LL ++ SL P V+R AFS+ W++
Sbjct: 561 DVSHFVRPNNSMDTEASMRGTTVYLVDKRIDMLPMLLGTDLCSLKPHVERFAFSVIWEMT 620
Query: 610 SAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVR 669
++V ++VI S SYE AQ ID Q + D+ +
Sbjct: 621 PDAEIVSANFTKSVIFSKEAFSYEQAQLRID-------------------DQSKNDDLTQ 661
Query: 670 SIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGRE----DLNFLFEE 725
+++L +SK L+ KR GAL L + P + D V + D N L EE
Sbjct: 662 GMRTLLRLSKTLRQKRMDAGALNL--ASPEVRIEAESELNDPVADVKTKALLDTNSLVEE 719
Query: 726 FMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCS-KHGLQLDTSSSGQFHQS 784
FMLLAN T A I +AFP +ALLRRH P + + A S K G LD SSS S
Sbjct: 720 FMLLANITVASRIYQAFPQTALLRRHATPPPQNFEQLIAQLSKKRGFSLDVSSSLALATS 779
Query: 785 LEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSP 843
L++ + F+ LI ATR M A YFC+G +T++ HY LA P+YTHFTSP
Sbjct: 780 LDKC---VDPSNPFFNTLIRILATRCMTSAEYFCAGAHA-ETEFRHYGLASPIYTHFTSP 835
Query: 844 LRRYPDLVVHRTLNAALEAE 863
+RRY DLVVHR L AA+ E
Sbjct: 836 IRRYADLVVHRQLAAAIGYE 855
Score = 40.8 bits (94), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 5/96 (5%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
I+ ++S+ L G + + V+ +N LE ++ +LI G NRA+ G
Sbjct: 255 IYPEYYSISKFMTGLRAGTLHQGTFNVSPYNYLEGSVQVAAFDKSLLILGRENSNRAIAG 314
Query: 219 DFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEAN 254
D V+++V W S ++ IV++ L + N
Sbjct: 315 DLVVVEVLPKDQWK-----SPSTKIVDEEALTKDEN 345
>gi|449544190|gb|EMD35164.1| hypothetical protein CERSUDRAFT_116633 [Ceriporiopsis subvermispora
B]
Length = 992
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 189/543 (34%), Positives = 265/543 (48%), Gaps = 69/543 (12%)
Query: 339 AMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNY--KGGSRKDAKKNRSSLSVP 396
A I S K+PTGR+V II+R+ W +Y S N +SLS
Sbjct: 365 ASIRSLSAKQPTGRIVGIIKRN--------------WRSYVCHIESTSLMSSNPTSLS-- 408
Query: 397 DREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQA 456
++ + TP P++ + + P T+ + + ID W+ S +P
Sbjct: 409 -QQTVFATPVSRLLPRIRMRTRQAP------------TLLGQKILVTIDRWDATSRYPDG 455
Query: 457 HVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQE-----ELLSR 509
H + GR E + ++L E + F L CLP W VP + E R
Sbjct: 456 HFVRALGRAESKEAEQESLLLEYDVPYRPFGKAILDCLPSEGDAWVVPPKADAVPEWKDR 515
Query: 510 KDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRS 569
+DLR I +IDP D+DDAL L +G GVHIADVS+FV P T +D EA R
Sbjct: 516 EDLRGLIICSIDPPGCQDIDDALHARPLPNGNIEAGVHIADVSHFVHPDTPMDNEAAARG 575
Query: 570 TSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCK 629
++VY++ ++I MLP LL + SL P V+RLAFS+ W+L D+V+ ++VI S
Sbjct: 576 STVYLVDKRIDMLPSLLGTNLCSLRPHVERLAFSVIWELTPEADIVNVRFTKSVIASKSA 635
Query: 630 LSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDG 689
+Y+ AQ D P L D+ +SI+ L +++ LK R G
Sbjct: 636 FTYDEAQVRKDD--------------PNLN-----DDLTKSIRLLNSLAQKLKAGRMAAG 676
Query: 690 ALRLENSKPVFLFD--EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSAL 747
AL L + + D E P D ++ N L EEFMLLAN + A+ I FP +A+
Sbjct: 677 ALNLASPEVKIHLDSAESSDPIDVEQKVLKETNSLVEEFMLLANISVAQKIQETFPQTAV 736
Query: 748 LRRH---PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN 804
LRRH P N KL++ + G+ LD SSSG SL+Q + + F+ L+
Sbjct: 737 LRRHLPPPPTNFEKLKDI--LQKRKGMTLDVSSSGALAASLDQC---VDLEEPAFNTLVR 791
Query: 805 -YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE 863
TR M A YFCSG DT +GHY LA P+YTHFTSP+RRY D++ HR L AA+
Sbjct: 792 IMTTRCMLSAEYFCSGSVARDT-FGHYGLASPIYTHFTSPIRRYADVLAHRQLAAAINFS 850
Query: 864 KLY 866
L+
Sbjct: 851 PLH 853
>gi|302925740|ref|XP_003054155.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256735096|gb|EEU48442.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 983
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 189/531 (35%), Positives = 261/531 (49%), Gaps = 65/531 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 407
+PT +VV +I+R+ R+ VG ++ + RK ++ + L P
Sbjct: 374 QPTAKVVGVIKRNWRQ--YVGHIDPSSASKASSQGRK-------------QDSVFLIPMD 418
Query: 408 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 467
K PK+ + + + D + KRL LV ID W +S P H + G
Sbjct: 419 KKIPKIRLRTRQVSDLLGKRL----------LVT--IDAWERDSRHPIGHFVRSLGELET 466
Query: 468 VEPQINAILYENAICCSGFSPESLSCLPC------VPWEVPQEELLSRKDLRNFCIFTID 521
+ A+L E + F L CLP VP V R+DLR I +ID
Sbjct: 467 KAAETEALLLEWDVQYRPFPKTVLDCLPKEGHDWKVPASVEDPGWRQREDLRGLLICSID 526
Query: 522 PSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPM 581
P D+DDAL +L +G VGVHIADVS+FV P A+D EA +R T+VY++ ++I M
Sbjct: 527 PPGCQDIDDALHARKLPNGNFEVGVHIADVSHFVKPANAMDTEASIRGTTVYLVDKRIDM 586
Query: 582 LPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDG 641
LP LL ++ SL P V+R AFS+ W+LN D+V ++VI+S SYE AQ ID
Sbjct: 587 LPPLLGTDLCSLKPYVERYAFSVLWELNDNADIVSARFTKSVIKSREAFSYEQAQLRID- 645
Query: 642 KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVF 700
+ + D+ + ++ L +SK LK KR GAL L + + V
Sbjct: 646 ------------------DESQQDDLTKGMRMLLMLSKKLKQKRMDAGALSLSSPEVKVQ 687
Query: 701 LFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLR 760
E P D D N L EEFML AN + A I AFP +A+LRRH AP
Sbjct: 688 TESETSDPIDVKTKQLLDTNSLVEEFMLFANVSVAAKIYEAFPQTAILRRHAAPPKTNFD 747
Query: 761 EF-EAFCSKHGLQLDTSSSGQFHQSLEQ---AREKLKDDYVLFDILIN-YATRPMQLASY 815
E +K GL+L T SS SL+Q A+E F+ L+ ATR M A Y
Sbjct: 748 ELANQLRTKRGLELRTDSSKALADSLDQCVDAKEP------FFNTLVRIMATRCMMSAEY 801
Query: 816 FCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
FCSG + ++ HY LA +YTHFTSP+RRY DL+ HR L AA++ E ++
Sbjct: 802 FCSGT-QAYPEFRHYGLASEIYTHFTSPIRRYADLLAHRQLAAAIDYEAVH 851
>gi|432958678|ref|XP_004086103.1| PREDICTED: DIS3-like exonuclease 1-like [Oryzias latipes]
Length = 1029
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 181/524 (34%), Positives = 275/524 (52%), Gaps = 44/524 (8%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVP-DREYIQLTPTH 407
PTGRVV +++R+ RD +V F + + S+ ++ + L+VP DR
Sbjct: 323 PTGRVVGVLQRN-WRDYVVTFPS-------RDASQSQSRSCQRVLTVPWDR--------- 365
Query: 408 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 467
+ PK I+ ++ +A ++ V R+D W S +P H + V GR GE
Sbjct: 366 -RIPK-----------IRISTQQAEA-LQDHRVVVRLDSWESTSLYPNGHSVKVLGRAGE 412
Query: 468 VEPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLRN-FCIFTIDP 522
+E ++ IL EN I FS + +P PW V E+ R+DLR+ +F+IDP
Sbjct: 413 LETEVQTILVENCIHVPPFSEAQMKEMPLSSPEKPWRVDPAEVARRRDLRDSHLVFSIDP 472
Query: 523 STATDLDDALSIERLSDG-ISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPM 581
D+DD LS+ L+ G + +GVHIADV++FV G+ D+EA+ R+T+ Y+ R+ M
Sbjct: 473 LGCEDVDDTLSVRSLAGGTLLELGVHIADVTHFVPEGSLTDLEARTRATTYYLADRRYDM 532
Query: 582 LPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR-WIGRTVIRSCCKLSYEHAQDIID 640
LP +LS ++ SL GVDR A S+ W+L++ V R W GRTVIRS +L YE AQ +++
Sbjct: 533 LPAVLSADLCSLLGGVDRYAMSVLWELDAGSLAVRRVWFGRTVIRSSYQLHYELAQALLN 592
Query: 641 GKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVF 700
G+ E E + + + ++++++ L VS+ L+ +R GAL LE +
Sbjct: 593 GE---EVRVPELERFCPEEKDLKLAQLIQALEMLTRVSRHLRLQRDRGGALELEGVEVRA 649
Query: 701 LFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLR 760
D+ V +++ E M+ AN A I +FP+ ALLRRHP P +
Sbjct: 650 QLDKDKNITALVPRQPLEVHETVAECMIYANHWVARKIQESFPNRALLRRHPPPRLELFS 709
Query: 761 EFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGD 820
+ G +DT ++ SL++A + D ++ +L ATR M A YF +G
Sbjct: 710 QLVDTAKAMGFSVDTRTNKALADSLDRAVD--PQDPMVNRLLRMMATRAMSQALYFSTGS 767
Query: 821 FKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
D + HY LA YTHFTSP+RRY D+VVHR L AALE E+
Sbjct: 768 QPQD-QYYHYGLALDRYTHFTSPIRRYADMVVHRLLTAALELEQ 810
>gi|300120171|emb|CBK19725.2| unnamed protein product [Blastocystis hominis]
Length = 802
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 215/715 (30%), Positives = 318/715 (44%), Gaps = 140/715 (19%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIE--GVQTDVLITGIAAQNRAV 216
I+ + E V LE G FKA + N N E + + + VL++G NRAV
Sbjct: 13 IYPNYLDEETVRLGLEAGRLFKATFHANVDNIREGHVTLHMNDSEVSVLLSGRLDINRAV 72
Query: 217 EGDFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNC 276
+GD V++++ + W K + Y +N
Sbjct: 73 DGDQVIVELYPKAQW----------------------------------KAESEYLVNND 98
Query: 277 TLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDST-EKVSSSQQNDGMNAIE 335
E+ + D++ E+ N +G STS T EKV++
Sbjct: 99 NPEEEQKDNDDEEKEKES-----------NKSSGKTESTSSRTAEKVTT----------- 136
Query: 336 RLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSV 395
GRVV+I R+ W Y G A+ +S
Sbjct: 137 ---------------GRVVAIARRN--------------WKQYCGSIEPIAEGTINS--- 164
Query: 396 PDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQ 455
Y P + + PK I+ + + A + +V A I++W S +P
Sbjct: 165 ----YYLFDPVNRRIPK-----------IRIKTNQYAALVNQRIVVA-INDWPTTSSYPI 208
Query: 456 AHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLR-N 514
H + G G+ E + +L E++I + FS E L CLP W + ++ R DLR
Sbjct: 209 GHYMKTLGVIGDREVETQVLLLEHSIPPNVFSKEVLDCLPPADWHITEQNARGRLDLRGK 268
Query: 515 FCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYM 574
CI +IDP D+DDAL L +G VG+HIADV+Y++ +ALD+EA+ RSTS Y+
Sbjct: 269 VCIVSIDPPGCKDIDDALHARELPNGNVEVGIHIADVTYYMKHNSALDLEARNRSTSTYL 328
Query: 575 LQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEH 634
+ R++ MLP LL+E + SL DR AFS+ ++ G+VV +T+IRS L+Y+
Sbjct: 329 VDRRLDMLPKLLTENLCSLVADQDRFAFSVIAEMTKQGEVVQTQFKKTIIRSKAALTYQQ 388
Query: 635 AQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLE 694
AQ+ +D + D S++ RS+ L+++SK LK +R + GAL L
Sbjct: 389 AQNYLDSRDD-------------------RSEIGRSVHLLFDLSKRLKAQRISAGALTLA 429
Query: 695 NSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPA 753
+ + F D E P +D N L EEFMLLAN A+ I AFP +A+LRRHP
Sbjct: 430 SPEVRFEMDSETNDPLSMDSYKLKDTNSLVEEFMLLANTLVAKRITEAFPKTAVLRRHPI 489
Query: 754 PNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDY--------VLFDILIN- 804
P+M F + + ++S L ++L D LF+ L+
Sbjct: 490 PDM--FPRFSLLIVESASTISSASRSAPAYFLVSPNKQLADSLDKAVLPAEPLFNKLLRI 547
Query: 805 YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAA 859
TR M A YF +G+ + HY LA +YTHFTSP+RRY D VVHR L AA
Sbjct: 548 LTTRCMTQAVYFPAGEVP-PAQFYHYGLAASIYTHFTSPIRRYADDVVHRLLAAA 601
>gi|227537978|ref|ZP_03968027.1| exoribonuclease R [Sphingobacterium spiritivorum ATCC 33300]
gi|227242054|gb|EEI92069.1| exoribonuclease R [Sphingobacterium spiritivorum ATCC 33300]
Length = 709
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 164/429 (38%), Positives = 222/429 (51%), Gaps = 34/429 (7%)
Query: 438 ELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV 497
E V I EW + S P V V G+ GE ++NAIL + S F PE
Sbjct: 185 EKVVVSITEWPKGSKNPVGRVKDVLGKKGENNTEMNAILADYGFPLS-FPPEVEKEANSF 243
Query: 498 PWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLP 557
+ E+L R+D R FTIDP+ A D DDA+S ++L +G +GVHIADVS+FV P
Sbjct: 244 SAVIDNTEILKRRDFRTIPTFTIDPADAKDFDDAISFQQLPNGHYEIGVHIADVSHFVKP 303
Query: 558 GTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR 617
TALD EA R+TSVY++ R IPMLP LS ++ SL P DRL FS ++L+ ++ D+
Sbjct: 304 DTALDKEAFERATSVYLVDRVIPMLPERLSNDLCSLRPNEDRLCFSAVFELDDKANIHDQ 363
Query: 618 WIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEV 677
W GRTVI S + SYE AQ++I+ K D I L E+
Sbjct: 364 WFGRTVIHSDRRFSYEEAQEVIENK---------------------AGDFTTEILKLNEL 402
Query: 678 SKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEV 737
+ IL++K+F +GA+ E+ + F DE G P R+D + L E+FMLLAN+ AE
Sbjct: 403 AYILREKKFKNGAISFESEEVKFTLDENGKPTGVYTKVRKDAHKLIEDFMLLANRKVAEY 462
Query: 738 IARAFPDSALL----RRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLK 793
I + L R H PN L F F S+ G +L S + +SL K++
Sbjct: 463 IGKQGKGKNKLTFVYRFHDLPNPETLTTFSQFASRFGHKLTIRSDKETAKSLNALMTKIE 522
Query: 794 DDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVH 853
++L + A R M A Y + HY LAF YTHFTSP+RRYPD++VH
Sbjct: 523 GSKEQ-NLLTSLAVRSMAKAVYTTK-------NTSHYGLAFDYYTHFTSPIRRYPDVMVH 574
Query: 854 RTLNAALEA 862
R L L+
Sbjct: 575 RLLQFYLDG 583
>gi|407859723|gb|EKG07119.1| mitochondrial exoribonuclease DSS-1, putative [Trypanosoma cruzi]
Length = 966
Score = 267 bits (682), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 183/526 (34%), Positives = 270/526 (51%), Gaps = 54/526 (10%)
Query: 349 PTGRVVSI--IERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 406
P G+VV I +ER P G ++V + +R A + + S +V + P
Sbjct: 328 PVGKVVGITSMERRP----FCGSIDVEEL------TRLTASEGKISGAVS----VLFQPK 373
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 466
+ P++ + +DL KRL + ID+W E + FP H + V G G
Sbjct: 374 DNRIPRIRISTRDLEYLKDKRL------------SVVIDDWPEYNSFPVGHYVEVLGTIG 421
Query: 467 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 526
+ + + IL EN + FS CLP W V ++EL R DLR+ C+ ++DP
Sbjct: 422 DKDTEAKVILLENDVPHYDFSEAVYDCLPKGQWSVSKDELERRLDLRDLCVVSVDPLGCR 481
Query: 527 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 586
D+DDAL +++ VGVHIADV++F+ TA+D EA RSTSVY++ R+I MLP LL
Sbjct: 482 DIDDALHCRVVNENHLEVGVHIADVTHFLHENTAMDEEAAKRSTSVYLVDRRINMLPQLL 541
Query: 587 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 646
+E + S+ DR AFSI W+ + +VV + G+TVIRS L Y AQ +ID DV
Sbjct: 542 TENLCSIVSNEDRYAFSILWEFDEKYNVVRDYFGKTVIRSRAALYYGDAQRMID---DVN 598
Query: 647 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVF-LFDEY 705
S++ S++ L ++S+ K R DGAL L + + F + +++
Sbjct: 599 DK----------------SEIAVSLRHLMDISRHFKAMREKDGALFLASQEFKFKVENDH 642
Query: 706 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF-EA 764
P D + + N + EE+ML AN AA + ++P LLRRH P EA
Sbjct: 643 VNPTDMQVYQTFEANSMIEEWMLFANAAAARKVYESYPRWTLLRRHQRPAENAFDNLNEA 702
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKD 823
K GL+LD ++S + SL + D F+ LI TR ++ A YF S +
Sbjct: 703 LERKLGLRLDDTTSLTLNTSLNTC---IDPDDAYFNQLIRILVTRCLRQAQYFSSSEVSQ 759
Query: 824 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKH 869
D ++ H+ LA P+YTHFTSP+RRY D++VHR L AAL ++ KH
Sbjct: 760 D-EFYHFGLAMPIYTHFTSPIRRYADVIVHRQLAAALGIMQVSEKH 804
>gi|320589376|gb|EFX01838.1| exosome complex exonuclease exoribonuclease [Grosmannia clavigera
kw1407]
Length = 1030
Score = 267 bits (682), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 188/529 (35%), Positives = 266/529 (50%), Gaps = 63/529 (11%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PT RVV ++ R+ R+ VG +V+Q + R +E + + P
Sbjct: 396 PTARVVGVVRRNWRQ--FVG--HVDQTSVSVSSLSASGGQGRK------QETVFVMPMDK 445
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
K PKM + + KR+ LVA +D W+ +S P H++ G
Sbjct: 446 KLPKMRLRTRQAGTLAGKRI----------LVA--MDAWDRDSRHPVGHLVRALGELETK 493
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCVP--WEVPQEELLS-----RKDLRNFCIFTID 521
+ A+L E + F L CLP W VP ++ + R+DLR + +ID
Sbjct: 494 AAETEALLLEYDVQYRPFPRTVLDCLPAEGHDWRVPADKETAAGWKNREDLRELLVCSID 553
Query: 522 PSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPM 581
P D+DDAL +RL++G +VGVHIADVS+FV G+A+D EA VR T+VY++ ++I M
Sbjct: 554 PEGCQDIDDALHAKRLANGNWQVGVHIADVSHFVQAGSAMDAEASVRGTTVYLVDKRIDM 613
Query: 582 LPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDG 641
LP+LL ++ SL P ++R AFS+ W+L +VVD ++VIRS SYE AQ ID
Sbjct: 614 LPMLLGTDLCSLRPRIERFAFSVLWELTDTAEVVDVRFCKSVIRSREAFSYEQAQLRID- 672
Query: 642 KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVF 700
D + L G +++L ++S++L+ +R GAL L + + V
Sbjct: 673 --DASQQDELTTG----------------MRALLKLSRLLRQRRMDAGALSLSSPEVKVH 714
Query: 701 LFDEYGTPYDSVLSGRE-------DLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPA 753
L E P D+ SG D N L EEFMLLAN A + AFP +A+LRRH A
Sbjct: 715 LESETADPLDAN-SGTTVEAKALLDTNSLVEEFMLLANTAVAARVYEAFPQTAMLRRHAA 773
Query: 754 PNMRKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQ 811
P E GL+L SS SL+ + +D F+ L+ ATR M
Sbjct: 774 PPAASFDELSRQLHVTRGLKLQHDSSRALADSLDAC---VDNDEPFFNTLVRILATRCMT 830
Query: 812 LASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
A YF +G ++ HY LA P+YTHFTSP+RRY DLVVHR L AA+
Sbjct: 831 AAEYFPAGALA-QPEFRHYGLATPIYTHFTSPIRRYADLVVHRQLAAAI 878
>gi|383854780|ref|XP_003702898.1| PREDICTED: DIS3-like exonuclease 2-like [Megachile rotundata]
Length = 814
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 152/418 (36%), Positives = 228/418 (54%), Gaps = 25/418 (5%)
Query: 453 FPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDL 512
F + + G G++E + NAIL E+ + + +SP + LP + + + ++ +R+D
Sbjct: 260 FAYGKIEKIVGSMGDIEAESNAILLEHDLDVTPYSPILMKGLPNSDYSLTENDIKNREDW 319
Query: 513 RNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSV 572
R+ C+FTIDP TA DLDDA+S + L + +GVHIADV++++ + LDI+ R+T++
Sbjct: 320 RDECVFTIDPDTAVDLDDAVSCKILENKNYEIGVHIADVTHYLDFLSPLDIQISKRATTI 379
Query: 573 YMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSY 632
YM MLP L EV SL PG D+LAFS+ W++ ++V +TVIRSCC+++Y
Sbjct: 380 YMTDNVYHMLPKQLC-EVCSLLPGQDKLAFSVIWEMTQNAEIVSHRFAKTVIRSCCQMAY 438
Query: 633 EHAQDIIDGKFDVESSNTLGEGWPQLY----GQFEWSDVVRSIKSLYEVSKILKDKRFTD 688
HAQ+ I+ + WP+ + G F D+ + L+ ++ ++DKRF +
Sbjct: 439 RHAQEFIENP---------KKNWPRKFLRVKGNFNLKDLSTKVNILHSLAIQMRDKRFKN 489
Query: 689 GALRLENSKPVFLFDEYG-TPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSAL 747
GALR++ K D P + +D N L EEFMLLAN T A + PD+AL
Sbjct: 490 GALRIDQPKLHVTLDPITRLPISYSIEELKDSNRLIEEFMLLANMTVATYLYDTIPDTAL 549
Query: 748 LRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQARE---------KLKDDYVL 798
LR H P+ L + K G+ LD SS H S+++ E K Y +
Sbjct: 550 LRNHREPSQYILNTTKDILEKFGIHLDIESSASLHASIKRYEEELESENNEIKTTMKYRM 609
Query: 799 FDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTL 856
++ N ++ M A+Y CS K + D HYAL +YTHFTSP+RRY D VVHR L
Sbjct: 610 M-VINNLCSKAMARATYKCSSTVKSEEDLKHYALNVSLYTHFTSPIRRYSDCVVHRLL 666
Score = 42.7 bits (99), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 160 FAPHWSMEAVNEALEKGDAFKALY-----RVNAHNRLEAYCKIEGVQTDVLITGIAAQNR 214
F + ++ +++ L+ ++ A Y R+N+ A+ G + D+LI GI +NR
Sbjct: 103 FPKYIPIDKIDQFLKPQNSADAQYVEGYIRINSRYNKHAFLSCNG-ERDLLIIGIRDRNR 161
Query: 215 AVEGDFVLIKVDRLSLWAKMKGFSNNSSIV 244
A++GDFV++++ W +G + IV
Sbjct: 162 ALDGDFVVVRIHPTEKWQMHRGEIQKTGIV 191
>gi|145499470|ref|XP_001435720.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402855|emb|CAK68323.1| unnamed protein product [Paramecium tetraurelia]
Length = 897
Score = 266 bits (680), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 179/522 (34%), Positives = 264/522 (50%), Gaps = 71/522 (13%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVP-DREYIQLTPTH 407
P G+VVS+++R+ R G + N + VP D Y H
Sbjct: 322 PYGKVVSVLQRTERH--FCGHVENN-------------------IFVPADGRYPNFILKH 360
Query: 408 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 467
KY + D I+++ V +W S P + V G+ G+
Sbjct: 361 SKYDTL-----------------QDKKIQVQFV-----DWPVWSDKPLCKLKKVLGKAGD 398
Query: 468 VEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEELLSRKDLRNFCIFTIDPSTA 525
+ + N IL E+ + FS + L+CLP + + ++E+ R DLR+ + +IDP
Sbjct: 399 MYIEGNVILLEHQVEIREFSHQVLACLPIEGDKYRISEQEIKRRMDLRDILVCSIDPVGC 458
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
D+DD L RL + + VGVHIADVS+FV P +A+D EA R T+VY++ R+ MLP L
Sbjct: 459 KDIDDTLHCRRLENNLYEVGVHIADVSHFVKPDSAIDKEAAHRCTTVYLVDRRTDMLPKL 518
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
L+E + SL VDRLAFS+ W ++ ++ D G++VIRS L Y+ AQ++ID D
Sbjct: 519 LTENLCSLVSNVDRLAFSVIWIMDDQANIKDVKFGKSVIRSVASLHYQQAQEMIDNPND- 577
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF-DE 704
S + + I+ L ++K LK R GAL L +++ F F DE
Sbjct: 578 ------------------NSQLTQGIRLLNMLAKKLKQLRTDQGALSLASNQVKFSFDDE 619
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + D N L EEFMLLAN + A I + FP ++LRRH P M++L+E +
Sbjct: 620 THNPSDVRMYQLYDTNSLVEEFMLLANCSVANQILQRFPSISVLRRHQEPKMKQLKELQI 679
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINY-ATRPMQLASYFCSGDFKD 823
+ G Q +S +SL+Q ++ D + F+ LI TR M A Y C+ D D
Sbjct: 680 LMNDLGYQFSFDTSKLLSESLDQI-QRPNDSF--FNKLIRMITTRCMNEALYVCTADV-D 735
Query: 824 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 865
+ HY LA +YTHFTSP+RRY D++VHR L A+++ E L
Sbjct: 736 YPELYHYGLAAELYTHFTSPIRRYADVLVHRLLAASIDLESL 777
>gi|429849578|gb|ELA24947.1| exosome complex exonuclease exoribonuclease [Colletotrichum
gloeosporioides Nara gc5]
Length = 953
Score = 266 bits (680), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 218/711 (30%), Positives = 319/711 (44%), Gaps = 123/711 (17%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
++A ++SM + ++ G + + V+ +N LE + +++ G NRAV G
Sbjct: 249 LYAEYYSMSKMMTGVKAGLMHQGNFNVSPYNYLEGSINVPAFPKPLIVLGRENINRAVNG 308
Query: 219 DFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCTL 278
D +V LP + ++ + +
Sbjct: 309 D-----------------------VVVVEVLPKD-----------------QWKEPSTKI 328
Query: 279 LSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLS 338
+ E+ I D+++ +E E ++++ K + S+ +G
Sbjct: 329 IEEEAITRDENADAE---------EAQDFVSEKERKALQEEVKKTQSKSTEG-------- 371
Query: 339 AMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDR 398
+PT +VV II+R+ R+ VG ++ + G RK +
Sbjct: 372 -------RAQPTAKVVGIIKRNWRQ--YVGHIDPSSASKSGGQGRK-------------Q 409
Query: 399 EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHV 458
+ + L P + PK+ + + + + + KRL LV ID W +S P H
Sbjct: 410 DNVFLIPMDRRIPKIKLRSRQVSELLGKRL----------LVT--IDAWERDSRHPVGHF 457
Query: 459 LHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP--CVPWEVPQEE----LLSRKDL 512
+ G + A+L E + F L CLP W VPQ R+DL
Sbjct: 458 VRSLGELETKAAETEALLLEYDVQYRPFPKTVLDCLPKEGHDWRVPQSTEDPGWRDREDL 517
Query: 513 RNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSV 572
R I +IDP D+DDAL L +G VGVHIADVS+FV PG A+D EA +R T+V
Sbjct: 518 RKLLICSIDPIGCQDIDDALHARPLPNGNFEVGVHIADVSHFVKPGNAMDTEASLRGTTV 577
Query: 573 YMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSY 632
Y++ ++I MLP+LL ++ SL P V+R AFS W++NS DVV ++VI+S SY
Sbjct: 578 YLVDKRIDMLPMLLGTDLCSLKPYVERYAFSCIWEMNSNADVVSVRFTKSVIQSKEAFSY 637
Query: 633 EHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALR 692
E AQ ID +G Q D+ SI++L +SK LK KR GAL
Sbjct: 638 EAAQLRID------------DGSQQ-------DDLTNSIRTLLALSKKLKQKRMDAGALS 678
Query: 693 LENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH 751
L + + V + E P D D L EEFMLLAN + A I AFP +A+LRRH
Sbjct: 679 LSSPEVKVQMESETSDPIDVKTKQHLDTMSLVEEFMLLANVSVATKIHEAFPQTAILRRH 738
Query: 752 PAPNMRKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRP 809
AP E + K GL+L SS SL+ + F+ L+ ATR
Sbjct: 739 GAPPKTNFDELADQLRVKKGLELRVDSSKALADSLDTCVDPANP---FFNTLVRIMATRC 795
Query: 810 MQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
M A YFCSG + ++ HY LA +YTHFTSP+RRY DLV HR L AA+
Sbjct: 796 MMSAEYFCSGT-QAYPEFRHYGLASEIYTHFTSPIRRYADLVAHRQLAAAI 845
>gi|296417554|ref|XP_002838419.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634355|emb|CAZ82610.1| unnamed protein product [Tuber melanosporum]
Length = 956
Score = 266 bits (680), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 185/527 (35%), Positives = 261/527 (49%), Gaps = 61/527 (11%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PT RVV +I+R+ R VG L+ + + G S+++ + L P
Sbjct: 343 PTARVVGVIKRNWRY--YVGHLDPSSAPSAGGRSQRN---------------VFLIPMDK 385
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
K PK+ + + + KR + ID W+ S +P H + G
Sbjct: 386 KIPKIRLRTRQASELFGKR------------IVVSIDAWDRNSRYPTGHFVRSLGEVETK 433
Query: 469 EPQINAILYENAICCSGFSPESLSCLP--CVPWEVPQE----ELLSRKDLRNFCIFTIDP 522
E +I A+L E + F L CLP W VPQ+ L R D R + +IDP
Sbjct: 434 EAEIEALLLEWDVQYRPFPKAVLDCLPKEGHEWRVPQDPEDPRLHQRVDYRGLLVCSIDP 493
Query: 523 STATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPML 582
D+DDAL R+ +G VGVHIADV++FV P TA+D EA VR T+VY++ +++ ML
Sbjct: 494 PGCQDIDDALHASRMPNGNYEVGVHIADVTHFVKPNTAMDDEASVRGTTVYLVDKRVDML 553
Query: 583 PVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
P+LL ++ SL P V+R AFS+ W++ GDVVD +++I+S SYE AQ ID K
Sbjct: 554 PMLLGTDLCSLKPHVERFAFSVIWEMTENGDVVDSRFSKSMIKSREAFSYEQAQLRIDDK 613
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFL 701
S N ++ + +++L +SK L+ KR GAL L + + +
Sbjct: 614 ----SQN---------------DELTQGMRTLLMLSKKLRQKRMAAGALNLASPEVKIES 654
Query: 702 FDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLRE 761
E P D + N L EEFMLLAN + A I AFP +A+LRRH AP E
Sbjct: 655 ESETSDPIDVKTKEMLETNSLVEEFMLLANISVAGKIYEAFPQTAMLRRHGAPPASNFEE 714
Query: 762 FE-AFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSG 819
+ GL L SS SL++ + F+ L+ ATR M A YFCSG
Sbjct: 715 LQNQLRVTRGLTLHIDSSKALADSLDRC---VDPSNPFFNTLVRILATRCMLSAEYFCSG 771
Query: 820 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
+ ++ HY LA +YTHFTSP+RRY D+V HR L AA+ E L+
Sbjct: 772 T-QGYPEFRHYGLASEIYTHFTSPIRRYADVVAHRQLAAAIGYEPLH 817
>gi|402902182|ref|XP_003913995.1| PREDICTED: exosome complex exonuclease RRP44 [Papio anubis]
Length = 874
Score = 266 bits (679), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 160/412 (38%), Positives = 227/412 (55%), Gaps = 25/412 (6%)
Query: 456 AHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNF 515
H + G GE E + +L E+ + FS LS LP +PW + ++++ +R+DLR+
Sbjct: 330 GHFVRNLGDVGEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHL 389
Query: 516 CIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYML 575
CI ++DP TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+
Sbjct: 390 CICSVDPPGCTDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLC 449
Query: 576 QRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHA 635
+++I M+P LLS + SL VDRLAFS W++N +++ ++VI S L+Y A
Sbjct: 450 EKRIDMVPELLSSNLCSLKCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTYAEA 509
Query: 636 QDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLEN 695
Q ID S+N D+ S++ L +++KILK +R GAL L +
Sbjct: 510 QLRID------SANM-------------NDDITTSLRGLNKLAKILKKRRIEKGALTLSS 550
Query: 696 SKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAP 754
+ F D E P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 551 PEVRFHMDSETHDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAP 610
Query: 755 NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLAS 814
L++ T ++ +SL++A E Y L +L ATR M A
Sbjct: 611 PPSNYEILVKAARSRNLEIKTDTAKSLAESLDRA-ESPTFPY-LNTLLRILATRCMMQAV 668
Query: 815 YFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
YFCSG D D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 669 YFCSG---MDNDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAVGADCTY 717
>gi|340058951|emb|CCC53322.1| putative rrp44p homologue [Trypanosoma vivax Y486]
Length = 983
Score = 266 bits (679), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 167/462 (36%), Positives = 240/462 (51%), Gaps = 36/462 (7%)
Query: 401 IQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLH 460
+ P + P++ + + D KRL + ID+W + FP H +
Sbjct: 395 VLFQPKDNRIPRIRITTSHINDLKDKRL------------SVIIDDWPAYNSFPVGHYVE 442
Query: 461 VFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTI 520
V G G+ + + IL EN I FS CLP W V Q+EL R DLR+ C+ ++
Sbjct: 443 VLGTIGDKDTEAKVILLENDIPHYDFSEAVYDCLPKGEWSVTQDELARRLDLRDLCVVSV 502
Query: 521 DPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIP 580
DP D+DDAL ++ VGVHIADV++F+ TA+D EA RSTSVY++ R+I
Sbjct: 503 DPLGCRDIDDALHCRVVNGNHLEVGVHIADVTHFLKENTAMDEEAAKRSTSVYLVDRRIN 562
Query: 581 MLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIID 640
MLP LL+E + S+ G DR AFSI W+ + +VV + G+TVI S L Y AQ +ID
Sbjct: 563 MLPQLLTENLCSIVAGEDRYAFSIMWEFDENYNVVREYFGKTVINSRAALYYGDAQKMID 622
Query: 641 GKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVF 700
D S++ S++ L +S+ K R DGAL L + + F
Sbjct: 623 DLTD-------------------QSEMAVSLRRLMRLSRHFKALREKDGALFLASQEFKF 663
Query: 701 LFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKL 759
D E+ P D + N + EE+ML AN AA + ++P LLRRH AP
Sbjct: 664 KVDNEHLNPIDMQTYQTFEANSMIEEWMLFANAAAARRVYSSYPRWTLLRRHQAPAENSF 723
Query: 760 REF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCS 818
EA + G++LD SSS ++SLE+ + +D +++ TR ++ A YF S
Sbjct: 724 DALNEALQRRVGVKLDDSSSLALNKSLEKCVD--PEDAYFNNLIRMLVTRCLRQAQYFSS 781
Query: 819 GDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
+ D ++ H+ LA P+YTHFTSP+RRY D++VHR L AAL
Sbjct: 782 SEVSQD-EFHHFGLAMPIYTHFTSPIRRYADVIVHRQLAAAL 822
>gi|410077995|ref|XP_003956579.1| hypothetical protein KAFR_0C04530 [Kazachstania africana CBS 2517]
gi|372463163|emb|CCF57444.1| hypothetical protein KAFR_0C04530 [Kazachstania africana CBS 2517]
Length = 1000
Score = 265 bits (678), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 231/730 (31%), Positives = 331/730 (45%), Gaps = 132/730 (18%)
Query: 160 FAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEGD 219
+ ++S + L+ G ++ +++ +N LE + VLI G NRA GD
Sbjct: 255 YPEYYSQARILGGLKSGVLYQGNVQISEYNFLEGSVTLPRFSKPVLIVGQENLNRAFNGD 314
Query: 220 FVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCTLL 279
V++++ S W SSI DS H D+ D+
Sbjct: 315 QVIVELLPQSEWKA------PSSIALDSE--------HFDV---NDNPDI---------- 347
Query: 280 SEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSA 339
D+ S E NQ NG SD ++ + A
Sbjct: 348 --------DEESEENVNQ-----------NGGASIISDKQRRLLAK------------DA 376
Query: 340 MISSYPTK-RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDR 398
+++ K +PT RVV I RS W Y G P+
Sbjct: 377 ILAQKAKKVQPTARVVGITRRS--------------WRLYVGQI------------APNS 410
Query: 399 EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHV 458
+Q T + ++++ K LP I+ R + ++ +V A +D+W +P H
Sbjct: 411 VDLQSNGTQNVF--VILMDKCLP-KIRIRTRRANELLDKRIVIA-VDDWPATHKYPLGHF 466
Query: 459 LHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVP----------QEEL 506
+ G VE + A+L E+ + FS + L CLP W+ P + L
Sbjct: 467 VRDLGGIETVEAETEALLLEHDVEYRPFSRKVLECLPAEGHDWKTPSNIKDPEALANDPL 526
Query: 507 LS-RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEA 565
L+ R DLR+ I +IDP D+DDAL +RL +G VGVHIADV++FV PGTALD E
Sbjct: 527 LAKRTDLRDKLICSIDPPGCVDIDDALHAKRLPNGNWEVGVHIADVTHFVKPGTALDAEG 586
Query: 566 QVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIR 625
R TSVY++ ++I MLP+LL ++ SL P VDR AFS+ W+LN D+V+ ++VIR
Sbjct: 587 ASRGTSVYLVDKRIDMLPMLLGTDLCSLKPYVDRFAFSVIWELNEDADIVNVDFTKSVIR 646
Query: 626 SCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKR 685
S SYE AQ ID D + L G +++L +SK LK KR
Sbjct: 647 SREAFSYEQAQVRID---DSNQKDELTLG----------------MRALLHLSKKLKQKR 687
Query: 686 FTDGALRLENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPD 744
GAL L + + V + E P + + N L EEFMLLAN + A I AFP
Sbjct: 688 LDAGALNLASPEVKVHMDSETSDPGEVEIKKLLATNSLVEEFMLLANISVARKIYDAFPQ 747
Query: 745 SALLRRHPAP---NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDI 801
+A+LRRH AP N L E + + + SS SL++ + +D Y F+
Sbjct: 748 TAMLRRHAAPPSTNFELLNEM--LHQRKNMTISLESSKALADSLDRCIDP-QDAY--FNT 802
Query: 802 LIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
L+ +TR M A YF SG + D+ HY LA +YTHFTSP+RRY D+V HR L AA+
Sbjct: 803 LVRIMSTRCMMAAQYFYSGAYS-YPDFKHYGLAVDIYTHFTSPIRRYCDVVAHRQLAAAI 861
Query: 861 EAEKLYWKHR 870
+ E L HR
Sbjct: 862 DYEPLSLMHR 871
>gi|255085895|ref|XP_002508914.1| predicted protein [Micromonas sp. RCC299]
gi|226524192|gb|ACO70172.1| predicted protein [Micromonas sp. RCC299]
Length = 959
Score = 265 bits (678), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 175/532 (32%), Positives = 266/532 (50%), Gaps = 65/532 (12%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTGRVV +++R+ R G +++ + + P
Sbjct: 351 PTGRVVGVVKRNWRERGYAACIDLGPGAAGAAAA----------------SRLLAVPQDR 394
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK I+ + + A ++ +V ID W +SP+P+ H + G+ G+
Sbjct: 395 RLPK-----------IRIQTRQAAALVDQRIVVV-IDSWPADSPYPEGHYVKSLGKLGDA 442
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLS----RKDLRNFCIFTIDPST 524
+ + A+L E + F+P +C+P +PW + L R+DLRN + ++DP
Sbjct: 443 DAETAAVLLEADVDDRPFAPAVHACVPPLPWSFDERTHLQAQPHREDLRNLRVCSVDPPG 502
Query: 525 ATDLDDALSIERLSD----GISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIP 580
D+DDALS L D G+ +GVHIADV+ F+ P TA+D EA+ R T+ Y++QR++
Sbjct: 503 CRDIDDALSCRPLDDEGMPGMLELGVHIADVTSFLHPDTAMDDEAKRRGTTTYLVQRRLD 562
Query: 581 MLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDV----VDRWIGRTVIRSCCKLSYEHAQ 636
MLP L+E++ SL GV+RL FS+F+ ++ + V+ + VI+S L+Y AQ
Sbjct: 563 MLPKPLTEDICSLRGGVERLTFSVFFRFDAKTGLPVPGVEPRFTKAVIKSAAALTYAEAQ 622
Query: 637 DIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENS 696
++D D S + ++ + ++ L+ +R GAL L +
Sbjct: 623 TMMDDPNDT-------------------SPLANDLRRINACARSLRKRRIDAGALTLASP 663
Query: 697 KPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPN 755
+ F D E P D + + N + EE MLLAN +AE I RAFP ALLRRHP P
Sbjct: 664 EVRFEMDKETNQPLDVGMYVTREANQMVEEMMLLANVASAERILRAFPSHALLRRHPTPA 723
Query: 756 MRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLAS 814
R C G+ +D S+S + SL+ A ++ D F+ L+ ATR M A
Sbjct: 724 PRMFDPLLKACRAAGVDVDVSTSKKLADSLDAA---VRPDDQYFNTLLRIVATRCMSQAV 780
Query: 815 YFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
Y SG + D HY LA P+YTHFTSP+RRY D+VVHR LNAAL E+ +
Sbjct: 781 YCVSGAHSVN-DRVHYGLAAPLYTHFTSPIRRYADVVVHRLLNAALGLERAH 831
Score = 39.7 bits (91), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 36/76 (47%)
Query: 158 KIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVE 217
+IFA H S + ++ G + R + E Y + V D++I G NRA++
Sbjct: 221 RIFAEHLSASQMAAGIKGGTLHQGSLRTGRFSPWEGYVGSDAVGGDIMIVGRTDMNRAMD 280
Query: 218 GDFVLIKVDRLSLWAK 233
GD V +++ S W +
Sbjct: 281 GDVVAVELLPESEWRR 296
>gi|332019153|gb|EGI59665.1| DIS3-like exonuclease 2 [Acromyrmex echinatior]
Length = 941
Score = 265 bits (678), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 169/479 (35%), Positives = 257/479 (53%), Gaps = 38/479 (7%)
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 466
HP+ + + LV+ LP+S+ + + + ID W + F VL V G+ G
Sbjct: 347 HPRDHR-IPLVEILPESVPPSFRDQPELFKDMMFFVSIDLWEQLHAF--GRVLSVVGKYG 403
Query: 467 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 526
E+ ++ A++ EN + S + L LP + + ++ R+D R+ CIF+IDP+TA
Sbjct: 404 EINTELTAVILENDLDLSPYHESLLKGLPSSDYILTDADMKDREDWRHECIFSIDPATAI 463
Query: 527 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 586
DLDDALS + L +G +GVHI+DV++++ + LD E R+T+VY+ MLP L
Sbjct: 464 DLDDALSCKILDNGNYEIGVHISDVTHYLKFSSPLDNEVLKRATTVYLPHMTSHMLPEAL 523
Query: 587 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 646
+V SL G D+LAFS+ W++ +V +TVIRSCC++SYE AQ ++D D E
Sbjct: 524 C-KVCSLFSGKDKLAFSVIWEMTPEAKIVKYRFAKTVIRSCCQMSYESAQAMLD---DPE 579
Query: 647 SSNTLGEGWPQ----LYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVF-- 700
S WP+ + G + S + + L+++S L++KRF GAL+L +KP
Sbjct: 580 KS------WPKDFLDIKGDYTISLLSDLVNKLFKLSTQLQNKRFDHGALKL--NKPTLQI 631
Query: 701 -----LFDEYG--TPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPA 753
L E+G P D + D + L EEFMLLAN T A + A P +ALLR H
Sbjct: 632 RIDPVLSQEHGIPIPVDYYVYESTDSHSLIEEFMLLANMTVATQLYVAIPKTALLRMHKD 691
Query: 754 PNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFD-------ILINYA 806
P+ + L K+G+ L+ ++G S+ +R + +++ V D ++IN
Sbjct: 692 PSKQCLSSLHVMLQKYGIHLNIETAGDLQASI--SRYEPENNSVTVDFMKYITMVIINLC 749
Query: 807 TRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 865
++ M A Y C+ D HYAL P+YTHFTSP+RRY D VHR L+A LE + L
Sbjct: 750 SKTMARAEYICAST-TSPYDLKHYALNVPLYTHFTSPIRRYADCTVHRLLSATLENKPL 807
>gi|358058536|dbj|GAA95499.1| hypothetical protein E5Q_02154 [Mixia osmundae IAM 14324]
Length = 1026
Score = 265 bits (678), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 202/608 (33%), Positives = 293/608 (48%), Gaps = 76/608 (12%)
Query: 324 SSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSR 383
++++ D +A E+ +S +PTGRVV I+ R+ R V L+ +
Sbjct: 380 TTEEPDSTDAKEQKETAVSDQGQAQPTGRVVGILRRAWR--SYVCHLDTSTL-------- 429
Query: 384 KDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAAR 443
A SL + + PT K P+ I+ R + A + + + +
Sbjct: 430 --APAALESLGT---QSVFAVPTDRKIPR-----------IRIRTRQISALVGQKFLVS- 472
Query: 444 IDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEV 501
ID W S P+ H + G E +I ++L E + FS L CLP W V
Sbjct: 473 IDSWEVSSRSPEGHFIRALGTVENKEAEIESLLLEWDVPYRPFSGSVLKCLPAEGDTWHV 532
Query: 502 PQEE-----LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVL 556
P ++ R+DLR I +IDP D+DDAL L +G GVHIADVSYFV
Sbjct: 533 PPKQDGGPAWRGREDLRELNICSIDPPGCQDIDDALHARMLPNGNVEAGVHIADVSYFVH 592
Query: 557 PGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD 616
P +D EA R T+VY++ ++I MLP LL + SL P V+RLAFS+ W+L+S ++V
Sbjct: 593 PDNPMDAEAASRGTTVYLVDKRIDMLPALLGTNLCSLRPYVERLAFSVIWELDSNANIVS 652
Query: 617 RWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 676
++VI S +YE AQ D Q + ++ ++I+ L +
Sbjct: 653 TRFTKSVIASKAAFTYEAAQKHKD-------------------DQTQTDELAQNIRLLNK 693
Query: 677 VSKILKDKRFTDGALRLENSKPVFLFD--EYGTPYDSVLSGREDLNFLFEEFMLLANKTA 734
++ L+ KR GAL L + + + E P D + N L EEFMLLAN +
Sbjct: 694 LAIALRGKRMAAGALNLASPEVKIHMESPESTGPVDVEQKQSYETNSLVEEFMLLANISV 753
Query: 735 AEVIARAFPDSALLRRH---PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREK 791
A I + FP +A+LRRH P+ N L + + G+ LD SSSG+ SL++ +
Sbjct: 754 AARIQQQFPQTAVLRRHLPPPSDNFDVLTDV--LTKRKGVTLDVSSSGRLASSLDECVDP 811
Query: 792 LKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDL 850
D F+ L+ ATR M A YFCSG + +GHY LA P+YTHFTSP+RRY D+
Sbjct: 812 SNPD---FNTLVRIMATRCMLSAEYFCSGSVAANA-FGHYGLATPIYTHFTSPIRRYADI 867
Query: 851 VVHRTLNAALEAEKLY-----WKHRRMLPKN---NHREGVRGRFLTGIFYDKDAAESLEG 902
+VHR L AA+ + L+ H L N HR G + + FY A +L+G
Sbjct: 868 LVHRQLFAAISSTPLHSAMHSRDHVDGLMSNINKRHRSGQQAGRASVEFY---VALALQG 924
Query: 903 REALSVAA 910
+E SV A
Sbjct: 925 KEEASVEA 932
>gi|342185875|emb|CCC95360.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 979
Score = 265 bits (677), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 187/524 (35%), Positives = 264/524 (50%), Gaps = 50/524 (9%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
P GRVV I + R G ++V + + G+ N S L P
Sbjct: 354 PVGRVVGIT--AMNRRPFCGSIDVEE-LHKLSGTMDTLTGNVSVL---------FQPKDN 401
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ P++ + L D KRL + ID W+ S FP H + V G G+
Sbjct: 402 RIPRIRITTGHLSDLKDKRL------------SVIIDGWSACSSFPVGHYVEVLGTIGDK 449
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDL 528
+ + IL EN I FS CLP W V EE+ R DLR+ C+ ++DP D+
Sbjct: 450 DTEAKVILLENDIPHYDFSEAVYDCLPKGEWSVSPEEVNRRLDLRDLCVVSVDPLGCRDI 509
Query: 529 DDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSE 588
DDAL +++ VGVHIADV++F+ TA+D EA RSTSVY++ R+I MLP LL+E
Sbjct: 510 DDALHCRKVNGNHLEVGVHIADVTHFLRESTAMDEEAAKRSTSVYLVDRRINMLPQLLTE 569
Query: 589 EVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESS 648
+ S+ DR AFSI W+ + VV + G+TVIRS L Y AQ +ID D E +
Sbjct: 570 NLCSIVANEDRYAFSILWEFDENFSVVREYFGKTVIRSRAALYYGDAQRMID---DPEDN 626
Query: 649 NTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGT 707
S++ S++ L ++ + KDKR DGAL L + + F D ++
Sbjct: 627 ----------------SEIATSLRYLMQLGRHFKDKREKDGALFLCSQEFKFKVDNDHVN 670
Query: 708 PYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF-EAFC 766
P D + N + EE+ML AN AA + ++P LLRRH AP +A
Sbjct: 671 PTDMQAYQTFESNSMIEEWMLFANAAAARRVYASYPRWTLLRRHQAPAENAFDVLNDALY 730
Query: 767 SKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILI-NYATRPMQLASYFCSGDFKDDT 825
K G++LD +SS + SL++ + D Y F+ LI TR ++ A YF S + D
Sbjct: 731 EKIGVKLDDTSSLTLNGSLDKCVDP-NDPY--FNRLIRTLITRCLRQAQYFSSSEVSRD- 786
Query: 826 DWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKH 869
++ HY LA P+YTHFTSP+RRY D++VHR L AAL +L H
Sbjct: 787 EFHHYGLAMPIYTHFTSPIRRYADVIVHRQLAAALGIVELSETH 830
>gi|384249711|gb|EIE23192.1| RNB-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 1599
Score = 265 bits (677), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 189/557 (33%), Positives = 281/557 (50%), Gaps = 62/557 (11%)
Query: 316 SDSTEKVSSSQQNDGMN---AIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNV 372
S TE ++ Q GM A +S KRPTG+VV II R+ R G G L
Sbjct: 317 SAETEDLARDQDGAGMAPQVAPGEHYGDAASSGEKRPTGKVVGIIRRNWRTRGYAGSLMP 376
Query: 373 NQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGD 432
+Q +G R A + P K+P + + +
Sbjct: 377 DQ--PGRGARRGGAN-------------MLFCPIERKFPFIRIHTRQA------------ 409
Query: 433 ATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLS 492
AT+ + + ID W +S +P H + G G+ + + +L EN I S F+P +
Sbjct: 410 ATLADKRIVVAIDGWEPDSAYPAGHYVCTLGPIGDRDTETEVLLLENDINTSPFTPAVHA 469
Query: 493 CLPCVPWEVPQEEL--LSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIAD 550
C+P +PW V Q ++ +R+DLR+ I ++DP D+DDAL I L +G +GVHIAD
Sbjct: 470 CVPPLPWSVTQGDIDDPNREDLRHLPICSVDPPGCKDIDDALHIRELPNGNLELGVHIAD 529
Query: 551 VSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNS 610
V++F+ GTA+D+EA RST+ Y++QR+I MLP L+E++ SL V+RLAFS+ W++
Sbjct: 530 VTHFLHSGTAMDVEAASRSTTTYLVQRRIDMLPKPLTEDICSLRADVERLAFSVLWEMTP 589
Query: 611 AGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRS 670
V ++VI+S L+Y AQ ID + +L+ + +
Sbjct: 590 DVRTVGVRFTKSVIKSRAALTYAEAQSRIDDE--------------RLHDELSV-----N 630
Query: 671 IKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLL 729
++ + +++IL+ +R GAL+L + + F D E P D + N + EE MLL
Sbjct: 631 LRKMNAIARILRRRRAEAGALQLASPEVKFEIDTETHDPLDV-----REANQMVEEMMLL 685
Query: 730 ANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAR 789
AN T A+ AF LLRRH P R+ + G +D S+S +SL+QA
Sbjct: 686 ANITVAQHTLAAFAACTLLRRHAVPPPRQFEPLLRAATAAGFTIDISTSKALAESLDQA- 744
Query: 790 EKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYP 848
++ + F+ L+ ATR M A Y SGDF ++ HY LA P+YTHFTSP+RRY
Sbjct: 745 --VRSEDAYFNKLVRIMATRCMTQAVYIGSGDFA-PPEYHHYGLAAPLYTHFTSPIRRYA 801
Query: 849 DLVVHRTLNAALEAEKL 865
D+VVHR L AAL +L
Sbjct: 802 DVVVHRLLAAALNLNRL 818
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 147 DNPSHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLI 206
D + +S R +I+ H M ++ ++ G + RVN N E Y E V D+LI
Sbjct: 206 DTGAGRSVKRKRIYEDHRPMSSITAGIKAGTLHQGSLRVNRFNPYEGYVGSESVGQDILI 265
Query: 207 TGIAAQNRAVEGDFVLIKVDRLSLW----AKMKG 236
G A NRA+EGD V +++ W A+++G
Sbjct: 266 AGRTAMNRALEGDIVAVELLPEDQWVGASARLRG 299
>gi|451848446|gb|EMD61752.1| hypothetical protein COCSADRAFT_39456 [Cochliobolus sativus ND90Pr]
Length = 990
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 188/531 (35%), Positives = 262/531 (49%), Gaps = 67/531 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 407
+PT RVV II+R+ W Y G SS S ++ + L P
Sbjct: 383 QPTARVVGIIKRN--------------WRQYVGHI-DRDSVRSSSKSSRQQQTVFLVPMD 427
Query: 408 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG---- 463
+ PK+ + + + + +R V A ID W ++S +P H + G
Sbjct: 428 KRIPKIRIRTRQAGELLGQR------------VLATIDSWEKDSRYPVGHFVRSLGELES 475
Query: 464 RGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEE----LLSRKDLRNFCI 517
+G E E A+L E + F L CLP W+VP RKDLR+ +
Sbjct: 476 KGAETE----ALLLEWDVQYKPFPKTVLDCLPAEGHDWKVPANMDDPGWRGRKDLRDLLV 531
Query: 518 FTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 577
+IDP D+DDAL +L +G +VGVHIADVS+FV P A+D EA R T+VY++ +
Sbjct: 532 CSIDPVGCVDIDDALHAHKLPNGNYQVGVHIADVSHFVKPNNAMDKEASQRGTTVYLVDK 591
Query: 578 KIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQD 637
+I MLP+LL ++ SL P V+R AFS+ W++ D+V ++VIRS SYE AQ
Sbjct: 592 RIDMLPMLLGTDLCSLKPYVERYAFSVIWEMTEDADIVASHFTKSVIRSREAFSYEQAQI 651
Query: 638 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 697
ID Q + D+ + +++L +SK LK KR GAL L + +
Sbjct: 652 RID-------------------DQSQTDDLTKGMRTLLMLSKKLKQKRMDAGALNLSSPE 692
Query: 698 -PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNM 756
V E P D D N L EEFMLLAN + A AFP +ALLRRH AP
Sbjct: 693 VKVRTESETSDPADVQTKKHLDTNSLVEEFMLLANTSVAAKNYEAFPQTALLRRHAAPPK 752
Query: 757 RKLREFE-AFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLAS 814
E + K G+++ T SS SL++ + + F+ L+ ATR M A
Sbjct: 753 TNFEELDNQLKVKKGMEIKTDSSKALADSLDKC---VDPNNPFFNTLVRIMATRCMMSAE 809
Query: 815 YFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 865
YFC+G + ++ HY LA +YTHFTSP+RRY DL HR L AA+E E+L
Sbjct: 810 YFCAGT-QAYPEFRHYGLASEIYTHFTSPIRRYADLEAHRQLAAAIEYEQL 859
>gi|310793361|gb|EFQ28822.1| RNB domain-containing protein [Glomerella graminicola M1.001]
Length = 983
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 188/528 (35%), Positives = 262/528 (49%), Gaps = 59/528 (11%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 407
+PT +VV II+R+ R+ VG ++ + G RK ++ + L P
Sbjct: 374 QPTAKVVGIIKRNWRQ--YVGHIDPSSASKSGGQGRK-------------QDNVFLIPMD 418
Query: 408 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 467
+ PK+ + + +P+ + KRL LV ID W+ +S P H + G
Sbjct: 419 KRIPKIKLRSRQVPELLGKRL----------LVT--IDAWDRDSRHPVGHFVRSLGELET 466
Query: 468 VEPQINAILYENAICCSGFSPESLSCLP--CVPWEVPQE----ELLSRKDLRNFCIFTID 521
+ A+L E + F L CLP W VPQ R+DLR I +ID
Sbjct: 467 KTAETEALLLEYDVQYRPFPKTVLDCLPKEGHDWRVPQSLEDPGWRDREDLRKLLICSID 526
Query: 522 PSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPM 581
P D+DDAL L +G VGVHIADVS+FV P A+D EA +R T+VY++ ++I M
Sbjct: 527 PIGCQDIDDALHARPLPNGNFEVGVHIADVSHFVKPANAMDTEASLRGTTVYLVDKRIDM 586
Query: 582 LPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDG 641
LP+LL ++ SL P V+R AFS+ W++++ D+V ++VI+S SYE AQ +D
Sbjct: 587 LPMLLGTDLCSLKPYVERYAFSVIWEMDANADIVGARFTKSVIQSKEAFSYEAAQLRVD- 645
Query: 642 KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVF 700
+ D+ SI++L +SK LK KR GAL L + + V
Sbjct: 646 ------------------DASQQDDLTNSIRTLMMLSKKLKQKRMDAGALSLSSPEVKVQ 687
Query: 701 LFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLR 760
+ E P D D L EEFMLLAN + A I AFP +A+LRRH AP
Sbjct: 688 MESETSDPIDVKTKQHLDTMSLVEEFMLLANVSVASKIYEAFPQTAILRRHGAPPKTNFD 747
Query: 761 EF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCS 818
E K GL+L SS SL+Q + F+ L+ ATR M A YFCS
Sbjct: 748 ELANQLRVKKGLELRVDSSKALADSLDQCVDPADP---FFNTLVRIMATRCMMSAEYFCS 804
Query: 819 GDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
G + ++ HY LA +YTHFTSP+RRY DLV HR L AA+ E ++
Sbjct: 805 GT-QAYPEFRHYGLASEIYTHFTSPIRRYADLVAHRQLAAAIGYEAIH 851
>gi|367020182|ref|XP_003659376.1| hypothetical protein MYCTH_2296319 [Myceliophthora thermophila ATCC
42464]
gi|347006643|gb|AEO54131.1| hypothetical protein MYCTH_2296319 [Myceliophthora thermophila ATCC
42464]
Length = 988
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 191/560 (34%), Positives = 276/560 (49%), Gaps = 59/560 (10%)
Query: 316 SDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQW 375
++ T + S ++ + R + ++ +PT RVV +++R+ R+ VG ++ +
Sbjct: 346 AEETADIVSEKERKALQEEVRRTHSKTTEGHAQPTARVVGVVKRNWRQ--YVGHIDQSSV 403
Query: 376 FNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATI 435
RK ++ + + P K PK+ + + + + + KR+
Sbjct: 404 SQSAQQGRK-------------QDTVFVIPMDRKIPKIRLRTRQVAELVGKRI------- 443
Query: 436 EMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP 495
LVA ID W+ S P H + G + A+L E + F L CLP
Sbjct: 444 ---LVA--IDAWDRSSRHPIGHFVRSLGELETKAAETEALLLEYDVQYRPFPKTVLDCLP 498
Query: 496 --CVPWEVPQEE----LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIA 549
W+VPQ R+DLR+ I +IDP D+DDAL L +G VGVHIA
Sbjct: 499 KEGHDWKVPQSTDDPGWRDREDLRHLLICSIDPVGCQDIDDALHSRPLPNGNFEVGVHIA 558
Query: 550 DVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLN 609
DVS+FV P TA+D EA +R T+VYM+ ++I MLP LL ++ SL P V+R AFS+ W+L
Sbjct: 559 DVSHFVKPNTAMDAEASIRGTTVYMVDKRIDMLPTLLGTDLCSLKPHVERYAFSVIWELT 618
Query: 610 SAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVR 669
+ DVV+ ++VI+S SYE AQ +D + D+ +
Sbjct: 619 ADADVVNVRFTKSVIKSREAFSYEQAQLRVD-------------------DASQQDDLTK 659
Query: 670 SIKSLYEVSKILKDKRFTDGALRLENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFML 728
SI++L +SK LK KR GAL L + + V E P D D L EEFML
Sbjct: 660 SIRTLMALSKKLKQKRLDAGALSLSSPEVKVQTESETSDPIDVKTKVLLDTMSLVEEFML 719
Query: 729 LANKTAAEVIARAFPDSALLRRHPAPNMRKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQ 787
LAN + A I AFP +A+LRRH AP E + K GL+L SS SL++
Sbjct: 720 LANVSVARKIYEAFPQTAILRRHGAPPKTNFDELADQLRVKRGLELSVESSRALADSLDR 779
Query: 788 AREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRR 846
+ + F+ L+ ATR M A YFCSG + ++ HY LA +YTHFTSP+RR
Sbjct: 780 CVDPKEP---FFNTLVRIMATRCMMAAEYFCSGT-QAYPEFRHYGLASEIYTHFTSPIRR 835
Query: 847 YPDLVVHRTLNAALEAEKLY 866
Y DLV HR L AA+ E ++
Sbjct: 836 YADLVAHRQLAAAIGYEPVH 855
>gi|19113445|ref|NP_596653.1| 3'-5' exoribonuclease subunit Dis3 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|585053|sp|P37202.1|DIS3_SCHPO RecName: Full=Exosome complex exonuclease dis3; AltName:
Full=Chromosome disjunction protein 3; AltName:
Full=Mitotic control protein dis3; AltName:
Full=Ribosomal RNA-processing protein 44
gi|173381|gb|AAA35302.1| mitotic control protein [Schizosaccharomyces pombe]
gi|3650393|emb|CAA21102.1| 3'-5' exoribonuclease subunit Dis3 (predicted) [Schizosaccharomyces
pombe]
Length = 970
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 188/534 (35%), Positives = 273/534 (51%), Gaps = 68/534 (12%)
Query: 346 TKR---PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQ 402
TKR PT +VV I++R+ R VG ++ KGGS+ + +
Sbjct: 353 TKRNAHPTAKVVGILKRNWR--PYVGHVDNATIAQSKGGSQ---------------QTVL 395
Query: 403 LTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVF 462
LTP + PK+ + P + +R + ID W+ S +P+ H +
Sbjct: 396 LTPMDRRVPKIRFRTRQAPRLVGRR------------IVVAIDLWDASSRYPEGHFVRDL 443
Query: 463 GRGGEVEPQINAILYENAICCSGFSPESLSCLP--CVPWEVPQEEL----LSRKDLRNFC 516
G E + A+L E + F L CLP W+VP ++ +RKD R+
Sbjct: 444 GEMETKEAETEALLLEYDVQHRPFPKAVLDCLPEEGHNWKVPADKTHPLWKNRKDFRDKL 503
Query: 517 IFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQ 576
I +IDP D+DDAL L +G VGVHIADV++FV P T++D EA R T+VY++
Sbjct: 504 ICSIDPPGCQDIDDALHACVLPNGNYEVGVHIADVTHFVKPNTSMDSEAASRGTTVYLVD 563
Query: 577 RKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQ 636
++I MLP+LL ++ SL P V+R AFS W+++ +++ ++VI S SY AQ
Sbjct: 564 KRIDMLPMLLGTDLCSLRPYVERFAFSCIWEMDENANIIKVHFTKSVIASKEAFSYADAQ 623
Query: 637 DIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENS 696
ID D + + L +G ++ L ++SKILK KR +GAL L +
Sbjct: 624 ARID---DQKMQDPLTQG----------------MRVLLKLSKILKQKRMDEGALNLASP 664
Query: 697 KPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAP- 754
+ D E P D + + N L EEFMLLAN + A+ I AFP +A+LRRH AP
Sbjct: 665 EVRIQTDNETSDPMDVEIKQLLETNSLVEEFMLLANISVAQKIYDAFPQTAVLRRHAAPP 724
Query: 755 --NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQ 811
N L++ C L+ DTS S +SL++ + K+ Y F+ L+ TR M
Sbjct: 725 LTNFDSLQDILRVCKGMHLKCDTSKS--LAKSLDECVDP-KEPY--FNTLLRILTTRCML 779
Query: 812 LASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 865
A YFCSG F D+ HY LA P+YTHFTSP+RRY D++ HR L AA++ E +
Sbjct: 780 SAEYFCSGTFA-PPDFRHYGLASPIYTHFTSPIRRYADVLAHRQLAAAIDYETI 832
Score = 50.1 bits (118), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
++ HWSM + ++ G+ K L ++ +N LE + G VL++G NRAV+G
Sbjct: 247 VYELHWSMSRLLACIKNGEVHKGLINISTYNYLEGSVVVPGYNKPVLVSGRENLNRAVQG 306
Query: 219 DFVLIKVDRLSLW 231
D V I++ W
Sbjct: 307 DIVCIQILPQDQW 319
>gi|255037464|ref|YP_003088085.1| ribonuclease R [Dyadobacter fermentans DSM 18053]
gi|254950220|gb|ACT94920.1| ribonuclease R [Dyadobacter fermentans DSM 18053]
Length = 795
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 169/498 (33%), Positives = 255/498 (51%), Gaps = 44/498 (8%)
Query: 377 NYKGGSRKDAKKNRSSLSVPD------REYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEE 430
N + R D+ +NR+ V D E + + +P++ + K L D I ++
Sbjct: 146 NLRSKGRGDSGRNRTEGRVTDIVERSNAEIVGIIEINPRFAVVQPDNKRLYDPIYLEPDQ 205
Query: 431 GDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPES 490
A + V ++ EW+ + ++ V G G + +++AIL E + F E
Sbjct: 206 VGAARHGDKVIVKVTEWSTRRSQAEGEIVSVLGAAGNNDVEMHAILAEFGLPYH-FPDEV 264
Query: 491 LSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIAD 550
+ +P ++ +++L R+D+R+ FTIDP A D DDALS+ L + + VGVHIAD
Sbjct: 265 EAEAQKIPNKIVKKDLAKRRDIRDVLTFTIDPVDAKDFDDALSVRYLDEDVVEVGVHIAD 324
Query: 551 VSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNS 610
VS++VLPGT L+ EA R+TSVY++ R +PMLP LS + SL P DRLAFS +++ S
Sbjct: 325 VSHYVLPGTELEKEALRRATSVYLVDRTVPMLPEKLSNNLCSLRPNEDRLAFSAIFEITS 384
Query: 611 AGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRS 670
G ++ W GRTVI S + +YE AQ ++D GEG D +
Sbjct: 385 KGKLLKEWFGRTVIHSDRRFTYEEAQAVLDS----------GEG-----------DFPKE 423
Query: 671 IKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLA 730
+ +L +++KI + +RF GA+ E + F D G P R D N L EEFMLLA
Sbjct: 424 LDTLNKLAKIFRKERFKKGAINFETPEVRFRLDPEGRPLGIYTKERHDSNKLIEEFMLLA 483
Query: 731 NKTAAEVIARAF----PDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLE 786
NK AE + ++ + R H AP+ +L+ F F +K GL+L+ + +S+
Sbjct: 484 NKRVAEYVYSLSKGEDKNTMVYRIHEAPDPDRLQTFANFVAKLGLKLEVEEESKIAKSMN 543
Query: 787 QAREKL--KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPL 844
K+ K + L + L A R M A Y D GH+ LAF Y+HFTSP+
Sbjct: 544 AMLAKVEGKPEQNLIESL---AVRTMAKARYSTE-------DLGHFGLAFRRYSHFTSPI 593
Query: 845 RRYPDLVVHRTLNAALEA 862
RRYPD++ HR L L+
Sbjct: 594 RRYPDVMAHRLLQHYLDG 611
>gi|300772611|ref|ZP_07082481.1| ribonuclease R [Sphingobacterium spiritivorum ATCC 33861]
gi|300760914|gb|EFK57740.1| ribonuclease R [Sphingobacterium spiritivorum ATCC 33861]
Length = 709
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 163/429 (37%), Positives = 221/429 (51%), Gaps = 34/429 (7%)
Query: 438 ELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV 497
E V I EW + S P V V G+ GE ++NAIL + S F PE
Sbjct: 185 EKVVVSITEWPKGSKNPVGRVKDVLGKKGENNTEMNAILADYGFPLS-FPPEVEKEANSF 243
Query: 498 PWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLP 557
+ E+ R+D R FTIDP+ A D DDA+S ++L +G +GVHIADVS+FV P
Sbjct: 244 SAVIDNTEIRKRRDFRTIPTFTIDPADAKDFDDAISFQQLPNGHYEIGVHIADVSHFVKP 303
Query: 558 GTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR 617
TALD EA R+TSVY++ R IPMLP LS ++ SL P DRL FS ++L+ ++ D+
Sbjct: 304 DTALDKEAFERATSVYLVDRVIPMLPERLSNDLCSLRPNEDRLCFSAVFELDDKANIHDQ 363
Query: 618 WIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEV 677
W GRTVI S + SYE AQ++I+ K D I L E+
Sbjct: 364 WFGRTVIHSDRRFSYEEAQEVIENK---------------------TGDFTTEILKLNEL 402
Query: 678 SKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEV 737
+ IL++K+F +GA+ E+ + F DE G P R+D + L E+FMLLAN+ AE
Sbjct: 403 AYILREKKFKNGAISFESEEVKFTLDENGKPTGVYTKVRKDAHKLIEDFMLLANRKVAEY 462
Query: 738 IARAFPDSALL----RRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLK 793
I + L R H PN L F F S+ G +L S + +SL K++
Sbjct: 463 IGKQGKGKNKLTFVYRFHDLPNPETLTTFSQFASRFGHKLTIRSDKETAKSLNALMTKIE 522
Query: 794 DDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVH 853
++L + A R M A Y + HY LAF YTHFTSP+RRYPD++VH
Sbjct: 523 GSKEQ-NLLTSLAVRSMAKAVYTTK-------NTSHYGLAFDYYTHFTSPIRRYPDVMVH 574
Query: 854 RTLNAALEA 862
R L L+
Sbjct: 575 RLLQFYLDG 583
>gi|344232836|gb|EGV64709.1| hypothetical protein CANTEDRAFT_104041 [Candida tenuis ATCC 10573]
Length = 988
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 173/471 (36%), Positives = 251/471 (53%), Gaps = 38/471 (8%)
Query: 413 MVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQI 472
VVL+ + I+ R + +V + +D W S +P H + G E +
Sbjct: 416 FVVLMDTVLPKIRIRTRRAKELLGKRIVIS-VDSWEATSKYPSGHFVRSLGDIESTEAET 474
Query: 473 NAILYENAICCSGFSPESLSCLP--CVPWEVPQ------EELLSRKDLRNFCIFTIDPST 524
A+L E+ + F+ L+CLP W+VP+ E+L RKDLR + +IDP
Sbjct: 475 EALLLEHDVEYRPFATNVLNCLPKEGDKWKVPENLDNGDEQLKKRKDLRGELVCSIDPPN 534
Query: 525 ATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPV 584
D+DDAL + L +G +VGVHIADV++FV TALD E R TSVY++ R+I MLP+
Sbjct: 535 CVDIDDALHAKPLPNGNFQVGVHIADVTHFVKANTALDDEGASRGTSVYLVDRRIDMLPL 594
Query: 585 LLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFD 644
LL + SLNP +DR AFS+ W+++ ++V +++IRS SYE AQ ID K
Sbjct: 595 LLGTNLCSLNPYIDRYAFSVIWEVDKDANIVSVEFTKSIIRSREAFSYEAAQKRIDDK-- 652
Query: 645 VESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFLFD 703
S N ++ +S++ L +SK LK KR +GAL L + + V +
Sbjct: 653 --SQN---------------DELTKSMRILLNLSKKLKQKRLNNGALNLASPEVKVHMDS 695
Query: 704 EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH---PAPNMRKLR 760
E P + + + N L EEFML AN + A I ++P +A+LRRH PA N +L
Sbjct: 696 ETSDPGEVEIKQLLETNSLVEEFMLFANISVARKIYDSYPQTAMLRRHAPPPASNFEQLN 755
Query: 761 EFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSG 819
+ + K+G+ + +S SL+ + KD+Y F+ L+ +TR M A YF SG
Sbjct: 756 DMLS-VRKNGMHISLENSKALADSLDNCIDP-KDEY--FNTLVRIMSTRCMMAAEYFPSG 811
Query: 820 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR 870
F +D+ HY LA +YTHFTSP+RRY D+VVHR L A+ E L HR
Sbjct: 812 -FFGYSDFKHYGLAVDIYTHFTSPIRRYCDIVVHRQLAGAIGYEDLAQSHR 861
>gi|402580871|gb|EJW74820.1| hypothetical protein WUBG_14271 [Wuchereria bancrofti]
Length = 401
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 148/324 (45%), Positives = 198/324 (61%), Gaps = 16/324 (4%)
Query: 446 EWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP---CVPWEVP 502
EW + F + + G G++E + +L N + FS +LS LP V W++
Sbjct: 3 EWQATAQFARGKLYKSLGLAGDIEAETEGLLLANDVDTREFSQAALSSLPITEAVEWKID 62
Query: 503 QEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLS--DGIS----RVGVHIADVSYFVL 556
++E RKD R+ +FTIDPSTA DLDDAL I+ +S DG VGVHIADVS+FV
Sbjct: 63 EKEFKYRKDFRDETVFTIDPSTARDLDDALHIKPISNCDGAGNPGWEVGVHIADVSHFVQ 122
Query: 557 PGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD 616
GT LD A R TSVY++ + IPMLP +L EE+ SLNP VDRL FS+ W +N G++ D
Sbjct: 123 FGTELDHWAFNRGTSVYLVHKVIPMLPQMLCEELCSLNPDVDRLTFSVVWKINDQGEIFD 182
Query: 617 RWIGRTVIRSCCKLSYEHAQD-IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 675
W GRT+IRSCCKLSYEHAQD I++ + D SS P+++ + +V +I L
Sbjct: 183 EWFGRTIIRSCCKLSYEHAQDFIVNPEKDFVSSEL-----PKIFNGKKSDEVKEAILRLN 237
Query: 676 EVSKILKDKRFTDGALRLENSKPVFLFDEY-GTPYDSVLSGREDLNFLFEEFMLLANKTA 734
+++ IL+ KRF +G++ E K F DE G P LS R++ NFL EEFMLLAN
Sbjct: 238 KIAVILRKKRFENGSINFEMPKLNFTLDETSGMPNGLCLSERKEANFLVEEFMLLANMAV 297
Query: 735 AEVIARAFPDSALLRRHPAPNMRK 758
A I +FP +ALLRRHP P ++K
Sbjct: 298 ARKIELSFPKTALLRRHPPPKIKK 321
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 54/81 (66%), Gaps = 6/81 (7%)
Query: 503 QEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLS--DGIS----RVGVHIADVSYFVL 556
++E RKD R+ +FTIDPSTA DLDDAL I+ +S DG VGVHIADVS+FV
Sbjct: 320 KKEFKYRKDFRDETVFTIDPSTARDLDDALHIKPISNCDGAGNPGWEVGVHIADVSHFVQ 379
Query: 557 PGTALDIEAQVRSTSVYMLQR 577
GT LD A R TSVY++ +
Sbjct: 380 FGTELDHWAFNRGTSVYLVHK 400
>gi|328786997|ref|XP_397381.4| PREDICTED: exosome complex exonuclease RRP44-like [Apis mellifera]
Length = 978
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 182/556 (32%), Positives = 273/556 (49%), Gaps = 60/556 (10%)
Query: 314 STSDSTEKVSSSQQNDGMNAIERLSAMISSYPT-KRPTGRVVSIIERSPRRDGIVGFLNV 372
S SD + +D + + L ISS K PTG++V II R+ R+ G L
Sbjct: 297 SPSDIILQDEEETDDDVLETKKILDKFISSNKMEKSPTGKIVGIIRRNWRQ--YCGILQS 354
Query: 373 NQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGD 432
N N +G R P K PK+ + + K+R+
Sbjct: 355 N---NIEGNVRH-----------------VFIPAERKIPKIRIETRQYGILSKQRI---- 390
Query: 433 ATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLS 492
+VA ID W S +P H + G G+ + IL E+ I S FS LS
Sbjct: 391 ------IVA--IDSWPRNSRYPLGHFVRALGEIGDKTTENEVILLEHDIPHSRFSDAVLS 442
Query: 493 CLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVS 552
LP +PW + +L R+D R+ + ++DP TD+DDAL LS+G VGVHIADV+
Sbjct: 443 SLPKMPWCITDSDLAQREDFRHLDVCSVDPPGCTDIDDALHCRYLSNGNLEVGVHIADVT 502
Query: 553 YFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAG 612
+F+ PGT LD EA +RST+VY++ +I MLP LLS + SL +RL FS W+++
Sbjct: 503 HFMRPGTPLDKEAALRSTTVYLVDTRIHMLPDLLSSNLCSLREKEERLTFSCIWEMDEDA 562
Query: 613 DVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIK 672
++++ +++I S ++Y+ AQ ID F +S + +S++
Sbjct: 563 NIINTRYCKSIIYSRAAMTYDEAQLKIDDAFQQDS-------------------LSKSLR 603
Query: 673 SLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLAN 731
+L ++K L+ +R +GAL L + + F D E P D + N + EEFMLLAN
Sbjct: 604 NLNSLAKKLRKRRLENGALVLASPEIRFQVDCETHDPIDIEAKKLRETNSMVEEFMLLAN 663
Query: 732 KTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREK 791
+ A+ I FP+ A+LRRHP P G ++ +S + +SL+
Sbjct: 664 ISVAKKILEEFPECAILRRHPEPPPSNFEPLIKAAKNQGFIINVNSGKKLAESLDNCH-- 721
Query: 792 LKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDL 850
K+ F+ ++ ATR M A YF SG +++ HY LA P+YTHFTSP+RRY D+
Sbjct: 722 -KESNPYFNTMLRILATRCMMQAIYFISG-MHQQSEYYHYGLASPIYTHFTSPIRRYADV 779
Query: 851 VVHRTLNAALEAEKLY 866
+VHR L + A+ Y
Sbjct: 780 MVHRLLAVCIGADATY 795
>gi|389642583|ref|XP_003718924.1| mitotic control protein dis3 [Magnaporthe oryzae 70-15]
gi|351641477|gb|EHA49340.1| mitotic control protein dis3 [Magnaporthe oryzae 70-15]
gi|440464780|gb|ELQ34148.1| mitotic control protein dis3 [Magnaporthe oryzae Y34]
gi|440489176|gb|ELQ68851.1| mitotic control protein dis3 [Magnaporthe oryzae P131]
Length = 990
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 211/717 (29%), Positives = 329/717 (45%), Gaps = 121/717 (16%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
++ +++M + ++ G + ++ V+ +N LE ++ + +LI G NRA++G
Sbjct: 256 VYPEYFTMSKMMTGVKSGLLHQGIFNVSPYNYLEGTIRVPAFEKALLILGRENINRAIDG 315
Query: 219 DFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCTL 278
D V+++V LP + ++ + +
Sbjct: 316 DSVVVEV-----------------------LPKD-----------------QWKVPSTKI 335
Query: 279 LSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLS 338
+ E + ++++ E +QE S+ + TEK + Q++ ++R+
Sbjct: 336 VEEDTVTRNENADGE--DQE---------------SSGNITEKERKALQDE----VKRMQ 374
Query: 339 AMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDR 398
A + +PT +VV +I+R+ R+ VG ++ + K A + R +
Sbjct: 375 AK-GAEAQAQPTAKVVGVIKRNWRQ--YVGHID-------QSSVSKSATQGRK------Q 418
Query: 399 EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHV 458
E + L P K PK+ + + + + + KR + ID W+ +S P H
Sbjct: 419 EVVFLIPMDKKIPKIRLRTRQVGELLGKR------------ILVTIDAWDRDSRHPVGHF 466
Query: 459 LHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP--CVPWEVPQEE----LLSRKDL 512
+ G + A+L E + F L CLP W+VP R+DL
Sbjct: 467 VRSLGELETKAAETEALLLEYDVQYRPFPKTVLDCLPKEGHDWKVPASTDDPGWRDREDL 526
Query: 513 RNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSV 572
R I +IDP D+DDAL L +G VGVHIADVS+FV P A+D EA +R T+V
Sbjct: 527 RGLLICSIDPIGCQDIDDALHARPLPNGNFEVGVHIADVSHFVKPSNAMDTEASIRGTTV 586
Query: 573 YMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSY 632
Y++ ++I MLP+LL ++ SL P V+R AFS+ W+L D+V+ ++VI+S SY
Sbjct: 587 YLVDKRIDMLPMLLGTDLCSLKPYVERFAFSVLWELTPDADIVNARFTKSVIKSREAFSY 646
Query: 633 EHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALR 692
E AQ +D D + L G I++L +SK LK KR GAL
Sbjct: 647 EAAQIRVD---DASQQDELTTG----------------IRTLLALSKKLKQKRMDAGALS 687
Query: 693 LENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH 751
L + + V + E P D + L EEFMLLAN + A I A P +A+LRRH
Sbjct: 688 LSSPEVKVQMESETSDPIDIKTKVHLETMSLVEEFMLLANISVARKIYEASPQTAILRRH 747
Query: 752 PAPNMRKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRP 809
AP E K G +L SS SL+ + + F+ L+ ATR
Sbjct: 748 GAPPKTNFDELANQLKVKKGFELRVDSSRALADSLDTC---VDPNNPFFNTLVRIMATRC 804
Query: 810 MQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
M A YFCSG + ++ HY LA +YTHFTSP+RRY DLV HR L AA+ E ++
Sbjct: 805 MMSAEYFCSGT-QAYPEFRHYGLASEIYTHFTSPIRRYADLVAHRQLAAAIGYEAVH 860
>gi|303285115|ref|XP_003061848.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457178|gb|EEH54478.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 889
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 183/533 (34%), Positives = 271/533 (50%), Gaps = 66/533 (12%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTG VV I+ RS R G ++ DA + +V + P
Sbjct: 329 PTGEVVGIVRRSWRERGYAASID-------------DATNATQTHAV----RLLAIPVDR 371
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK I+ + + A ++ +V ID+W +SP P+ H + G G+
Sbjct: 372 RLPK-----------IRIQTRQASALLDQRIVVV-IDDWPIDSPHPRGHYVKSLGPLGDA 419
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLS----RKDLRNFCIFTIDPST 524
+ + +A+L E + F+P +C+P +PW + L R+DLR+ + ++DP
Sbjct: 420 DAETDAVLLEADVDDRLFAPAVHACVPPLPWAFDERAHLGAQPHREDLRSLRVCSVDPPG 479
Query: 525 ATDLDDALSIERLSD-------GISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 577
D+DDALS L D G +GVHIADV+ F+ P TA+D EA+ R T+ Y++QR
Sbjct: 480 CRDIDDALSCRVLVDDDDGAETGQLELGVHIADVTSFLRPNTAMDAEARKRGTTTYLVQR 539
Query: 578 KIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDV----VDRWIGRTVIRSCCKLSYE 633
++ MLP L+E++ SL GV+RLAFS+F+ ++ + V ++ I+S L+Y+
Sbjct: 540 RLDMLPKPLTEDICSLRGGVERLAFSVFFRFDAKTCLPVPGVSPRFTKSAIKSSAALTYQ 599
Query: 634 HAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRL 693
AQ+++D + D ES T +R + ++ ++ L+ +R GAL L
Sbjct: 600 EAQELMDDETD-ESPLTRD---------------LRRVLNINRCARALRKRRVDAGALTL 643
Query: 694 ENSKPVFLFDEYGT-PYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHP 752
+ + F D P D + + N + EE MLLAN AAE I +AFP ALLRRHP
Sbjct: 644 ASPEVRFELDASTQDPLDVAMYVTREANQMVEEMMLLANVAAAEAILKAFPSHALLRRHP 703
Query: 753 APNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQ 811
P R C+ G+ +D SSS SL+ AR + D Y F+ L+ ATR M
Sbjct: 704 TPAPRMFDPLLKACAAVGVDIDASSSKTLADSLDAAR-RPGDPY--FNTLLRIVATRCMS 760
Query: 812 LASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
A Y SG + D HY LA P+YTHFTSP+RRY D+VVHR LNAAL E+
Sbjct: 761 QAVYCVSGAHSVN-DRVHYGLAAPLYTHFTSPIRRYADVVVHRLLNAALGLER 812
>gi|325103978|ref|YP_004273632.1| RNAse R [Pedobacter saltans DSM 12145]
gi|324972826|gb|ADY51810.1| RNAse R [Pedobacter saltans DSM 12145]
Length = 705
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 156/424 (36%), Positives = 225/424 (53%), Gaps = 34/424 (8%)
Query: 441 AARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWE 500
A+I +W EE+ P + V G+ GE + ++NAIL E + F E +
Sbjct: 183 VAKIVDWPEEAKNPVGVIKSVLGKEGENDTEMNAILAEYGFPLN-FPAEVEHEANSISDT 241
Query: 501 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 560
+ QEE+ R+D R+ FTIDP A D DDA+S ++L +G +GVHIADVS++V P ++
Sbjct: 242 ISQEEIKKRRDFRDTLTFTIDPFDAKDFDDAISFKKLENGNYEIGVHIADVSHYVQPESS 301
Query: 561 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIG 620
LD EA R TSVY++ R IPMLP LS + SL P D+L+FS +++N +++ W G
Sbjct: 302 LDKEAFERGTSVYLVDRVIPMLPERLSNNLCSLRPLEDKLSFSAVFEINDEAQILNEWYG 361
Query: 621 RTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKI 680
+TVI S + +YE AQ+II+ E + I +L +++ I
Sbjct: 362 KTVINSNRRFTYEEAQEIIEN---------------------ESGEYAEEIITLNKLAYI 400
Query: 681 LKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR 740
L+DKRF GA+ E+++ F DE G P + R+D + L E+FMLLAN+ AE I++
Sbjct: 401 LRDKRFKQGAINFESAEVKFKLDENGKPIGVYVKERKDAHKLIEDFMLLANRKVAEFISK 460
Query: 741 AFPDSALL----RRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDY 796
L R H +PNM L F F S+ G ++ T S +SL + ++
Sbjct: 461 KGKGKHRLTFVYRAHDSPNMETLNTFSQFASRFGYKISTKSDRDISRSLNKLMADVEGKK 520
Query: 797 VLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTL 856
++L A R M A Y HY LAF YTHFTSP+RRYPD++VHR L
Sbjct: 521 EQ-NVLTQLAIRSMAKAIYTTKSS-------SHYGLAFDFYTHFTSPIRRYPDVLVHRLL 572
Query: 857 NAAL 860
L
Sbjct: 573 EHYL 576
>gi|451998902|gb|EMD91365.1| hypothetical protein COCHEDRAFT_1175213 [Cochliobolus
heterostrophus C5]
Length = 978
Score = 263 bits (673), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 188/531 (35%), Positives = 262/531 (49%), Gaps = 67/531 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 407
+PT RVV II+R+ W Y G SS S ++ + L P
Sbjct: 371 QPTARVVGIIKRN--------------WRQYVGHI-DRDSVRSSSKSSRQQQTVFLVPMD 415
Query: 408 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG---- 463
+ PK+ + + + + +R V A ID W ++S +P H + G
Sbjct: 416 KRIPKIRIRTRQAGELLGQR------------VLATIDSWEKDSRYPVGHFVRSLGELES 463
Query: 464 RGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEE----LLSRKDLRNFCI 517
+G E E A+L E + F L CLP W+VP RKDLR+ +
Sbjct: 464 KGAETE----ALLLEWDVQYKPFPKTVLDCLPAEGHDWKVPANMDDPGWRGRKDLRDLLV 519
Query: 518 FTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 577
+IDP D+DDAL +L +G +VGVHIADVS+FV P A+D EA R T+VY++ +
Sbjct: 520 CSIDPVGCVDIDDALHAHKLPNGNYQVGVHIADVSHFVKPNNAMDKEASQRGTTVYLVDK 579
Query: 578 KIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQD 637
+I MLP+LL ++ SL P V+R AFS+ W++ D+V ++VIRS SYE AQ
Sbjct: 580 RIDMLPMLLGTDLCSLKPYVERYAFSVIWEMTEDADIVASHFTKSVIRSREAFSYEQAQI 639
Query: 638 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 697
ID Q + D+ + +++L +SK LK KR GAL L + +
Sbjct: 640 RID-------------------DQSQDDDLTKGMRTLLMLSKKLKQKRMDAGALNLSSPE 680
Query: 698 -PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNM 756
V E P D D N L EEFMLLAN + A AFP +ALLRRH AP
Sbjct: 681 VKVRTESETSDPADVQTKKHLDTNSLVEEFMLLANTSVAAKNYEAFPQTALLRRHAAPPK 740
Query: 757 RKLREFE-AFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLAS 814
E + K G+++ T SS SL++ + + F+ L+ ATR M A
Sbjct: 741 TNFEELDNQLKVKKGMEIKTDSSKALADSLDKC---VDPNNPFFNTLVRIMATRCMMSAE 797
Query: 815 YFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 865
YFC+G + ++ HY LA +YTHFTSP+RRY DL HR L AA+E E+L
Sbjct: 798 YFCAGT-QAYPEFRHYGLASEIYTHFTSPIRRYADLEAHRQLAAAIEYEQL 847
>gi|358367033|dbj|GAA83653.1| mitotic control protein Dis3 [Aspergillus kawachii IFO 4308]
Length = 1033
Score = 263 bits (673), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 193/563 (34%), Positives = 279/563 (49%), Gaps = 69/563 (12%)
Query: 316 SDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQW 375
+D TE V S ++ + R + SS +PT +VV +++R+ R+ VG ++
Sbjct: 347 TDDTEAVVSERERKALQEEVRKAHGKSSEGKPQPTAKVVGVMKRNWRQ--YVGHVDA--- 401
Query: 376 FNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATI 435
G + A R ++ + + P + PK+ V + D + +R+
Sbjct: 402 ----GSAGAQASSGRR------QQTVFVLPMDKRVPKIRVRTRQAGDLMGQRI------- 444
Query: 436 EMELVAARIDEWNEESPFPQAHVLHVFG----RGGEVEPQINAILYENAICCSGFSPESL 491
LV ID W+ +S +P H + G +G E E A+L E + F L
Sbjct: 445 ---LVT--IDAWDRDSRYPTGHFIRSLGELETKGAETE----ALLLEYDVQYKPFPKAVL 495
Query: 492 SCLPCV--PWEVPQEE----LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVG 545
CLP W VP + R+DLR+ I +IDP D+DDAL L +G VG
Sbjct: 496 DCLPAEGHDWRVPASKDNIGWKGRRDLRDLLICSIDPPGCQDIDDALHARPLPNGNFEVG 555
Query: 546 VHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIF 605
VHIADVS+FV P A+D+EA +R T+VY++ ++I MLP LL ++ SL P V+R AFS+
Sbjct: 556 VHIADVSHFVKPNNAMDLEASLRGTTVYLVDKRIDMLPHLLGTDLCSLKPYVERYAFSVL 615
Query: 606 WDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWS 665
W++ +VV ++VIRS SYE AQ ID D + L E
Sbjct: 616 WEMTPNAEVVSADFTKSVIRSREAFSYEKAQKRID---DPTQKDELTE------------ 660
Query: 666 DVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF--DEYGTPYDSVLS-GREDLNFL 722
S+++L SKIL+ KR GAL L + + DE G P V + + N L
Sbjct: 661 ----SMRTLLRFSKILRQKRMDAGALNLASPEVRIETDNDEVGDPLTDVKTKAMLETNSL 716
Query: 723 FEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF-EAFCSKHGLQLDTSSSGQF 781
EEFML AN T A I F +A+LRRH P + E K ++LD SSS
Sbjct: 717 VEEFMLHANITVASKIYSTFSQTAMLRRHATPPPQNFEELINQLTKKRNMRLDVSSSRAL 776
Query: 782 HQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHF 840
SL++ + + F+ L+ ATR M A YFC+G ++++ HY LA P+YTHF
Sbjct: 777 ADSLDRC---VDEKNPFFNTLVRILATRCMTSAEYFCAGAHA-ESEFRHYGLASPIYTHF 832
Query: 841 TSPLRRYPDLVVHRTLNAALEAE 863
TSP+RRY DL+VHR L +A+ E
Sbjct: 833 TSPIRRYADLLVHRQLASAIGYE 855
Score = 42.7 bits (99), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 155 ARCKIFAP-HWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQN 213
AR ++F P ++SM + + G + ++ V+ +N LE + +LI G N
Sbjct: 249 ARGELFYPEYYSMSKLMTGIRAGTLHQGVFNVSPYNYLEGSVNVPAFDKPLLILGRDNSN 308
Query: 214 RAVEGDFVLIKV 225
RA+ GD V+I+V
Sbjct: 309 RAISGDVVVIEV 320
>gi|340724044|ref|XP_003400395.1| PREDICTED: DIS3-like exonuclease 2-like [Bombus terrestris]
Length = 784
Score = 263 bits (673), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 149/422 (35%), Positives = 234/422 (55%), Gaps = 25/422 (5%)
Query: 453 FPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDL 512
F + + G G+++ + NAIL+E + + +S LP + + + ++ R+D
Sbjct: 230 FAVGKIEKIIGNIGDIKAESNAILFEYDLDVTPYSLHVTKELPSSDYSLTENDIKDREDW 289
Query: 513 RNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSV 572
++ CIFTIDP TA DLDD++S + L +G +GVHI+DV++++ + LDI+ R+T++
Sbjct: 290 KDECIFTIDPDTAVDLDDSVSCKPLENGNYEIGVHISDVTHYLKFLSPLDIQVSKRATTI 349
Query: 573 YMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSY 632
YM MLP L +V SL+PG D+LAFS+ W++ VV +TVIRSCC++SY
Sbjct: 350 YMADNTYHMLPKELC-QVCSLSPGQDKLAFSVIWEMTQDAKVVKHRFAKTVIRSCCQMSY 408
Query: 633 EHAQDIIDGKFDVESSNTLGEGWPQLY----GQFEWSDVVRSIKSLYEVSKILKDKRFTD 688
+H Q +I+ WP Y G ++ +D+ + L+ ++ ++ +RF +
Sbjct: 409 QHVQKMIENP---------EYNWPDNYIYIDGNYKLNDLSIKVNILHNLAIQMRKRRFQN 459
Query: 689 GALRLENSKPVFLFDEY-GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSAL 747
GAL+++ K D G P + ++D N L EEFMLLAN T A+ + P++AL
Sbjct: 460 GALQIDLPKLYVRVDRITGLPISYNIEEQQDSNRLIEEFMLLANMTVAKHLYNVIPETAL 519
Query: 748 LRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKL--KDD-------YVL 798
LR H P+ L + K G+ LD +SS H S+++ E L +DD Y +
Sbjct: 520 LRIHTEPSKHILSTTQDMLQKFGIHLDITSSTSLHASMKRYEEGLETEDDERRKIMKYRM 579
Query: 799 FDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNA 858
++ N +R M A+Y CS + + HYAL P+YTHFTSP+RRY D VVHR L +
Sbjct: 580 M-VINNLCSRAMARATYICSSTVEAQEELRHYALNIPLYTHFTSPIRRYSDCVVHRLLYS 638
Query: 859 AL 860
L
Sbjct: 639 TL 640
Score = 49.3 bits (116), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%)
Query: 170 NEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEGDFVLIKVDRLS 229
NE ++ + R+N NR AY Q D+LI G+ +NRA +GDFV+ +++
Sbjct: 90 NENSDETQYIEGQLRINPRNREYAYLPFSDDQRDLLIIGLRDRNRAFDGDFVVACINQPE 149
Query: 230 LWAKMKGFSNNSSIV 244
W KG+ + +V
Sbjct: 150 KWEMHKGYEQKTGVV 164
>gi|219127886|ref|XP_002184157.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404388|gb|EEC44335.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 908
Score = 263 bits (673), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 185/556 (33%), Positives = 278/556 (50%), Gaps = 58/556 (10%)
Query: 313 PSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNV 372
P ++ T + + S+ MN + A+ + RPTG+VV II R+
Sbjct: 328 PGIANETAEPTISE----MNNVADTFALEDDAESLRPTGKVVGIIRRN------------ 371
Query: 373 NQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGD 432
F+ GS A KN +RE+ + T +P + K +P I R + D
Sbjct: 372 ---FSTYSGSIY-AIKNY------EREHPDGSITCVFFP----VDKKIP-PILIRTTQRD 416
Query: 433 ATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLS 492
+V A +D W S +P H + V G G + + +L E+ I F L+
Sbjct: 417 RLFGQRIVVA-MDSWPSTSIYPLGHYVRVIGPAGSKDVETEVLLQEHDIPHEPFPAAVLA 475
Query: 493 CLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVS 552
CLP + + + R+D+R+ + +IDP D+DDAL L +G +VGVHIADV+
Sbjct: 476 CLPPEDYRIDVDNSPGRQDIRHIPVLSIDPPNCKDIDDALHCTVLPNGNFQVGVHIADVT 535
Query: 553 YFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAG 612
++V GTA+D+EA RSTS Y++ +++ MLP LL+ ++ SL VDR AFS+ W++
Sbjct: 536 HYVQAGTAIDLEAANRSTSTYLVNKRLDMLPSLLTTDLCSLKGNVDRYAFSVLWEVTPEA 595
Query: 613 DVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIK 672
++++ +T+I S L+Y+ AQ +ID D + ++K
Sbjct: 596 EILNVEFQKTIIHSIAALTYQQAQTMIDQPDDPNDIQS------------------NAVK 637
Query: 673 SLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLAN 731
L +++ + +R GAL L + + F+ D E P D + N + EEFMLLAN
Sbjct: 638 RLASLARKFRKRRIDAGALTLASPEVKFVLDSESLNPTDVQAYALLEANAVVEEFMLLAN 697
Query: 732 KTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREK 791
T ++ I R FP ++LRRHPAPN + L ++ S + SL+ A +
Sbjct: 698 VTVSKKILRHFPTLSVLRRHPAPNRAMFDSLISKAKSKDLDINIDDSKRLADSLDAAVVE 757
Query: 792 LKDDYV--LFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPD 849
D YV L IL +TR M A YFCSG+F+ +W HY LA PVYTHFTSP+RRY D
Sbjct: 758 -SDPYVNKLLRIL---STRCMSPAQYFCSGEFR-PMEWHHYGLAAPVYTHFTSPIRRYAD 812
Query: 850 LVVHRTLNAALEAEKL 865
+ VHR L AA+ L
Sbjct: 813 VCVHRLLAAAVGVAPL 828
>gi|160333118|ref|NP_001103928.1| DIS3-like exonuclease 1 [Danio rerio]
gi|166201902|sp|A2RV18.1|DI3L1_DANRE RecName: Full=DIS3-like exonuclease 1
gi|124481655|gb|AAI33137.1| DIS3 mitotic control homolog (S. cerevisiae)-like [Danio rerio]
Length = 1057
Score = 263 bits (673), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 180/525 (34%), Positives = 273/525 (52%), Gaps = 46/525 (8%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTGRVV I++R+ RD +V + + S+K I + P
Sbjct: 324 PTGRVVEILQRN-WRDYVVTLPPFEEMQSQSRNSQK----------------ILVVPWDY 366
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK I+ ++ +A ++ + V R+D W S +P H + V G+ GE+
Sbjct: 367 RIPK-----------IRISTQQAEA-LQDQRVIVRLDSWESTSVYPNGHFVRVLGKSGEL 414
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLRN-FCIFTIDPS 523
E +I IL EN I FS L +P PW++ E+ SR+DLR+ +F+IDP
Sbjct: 415 ETEIQTILVENCIHVPPFSEAQLREMPVNTEENPWQMDSNEVSSRRDLRDSHLVFSIDPK 474
Query: 524 TATDLDDALSIERLSDGIS-RVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPML 582
D+DD LS+ L G +GVHIADV++FV G+ D+EA+ R+T+ Y+ R+ ML
Sbjct: 475 GCEDVDDTLSVRTLPGGKRLELGVHIADVTHFVREGSLTDLEARSRATTYYLADRRYDML 534
Query: 583 PVLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDG 641
P +LS ++ SL GVDR A S+ W+L++ +V W GRT+IRS +L YE AQ +++G
Sbjct: 535 PAVLSADLCSLLGGVDRYAMSVLWELDAETLEVCSVWFGRTLIRSSYQLHYELAQSLLNG 594
Query: 642 -KFDVESSNTL-GEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPV 699
+ +V N L G Q + S++++++++L V++ L+ +R GAL LE +
Sbjct: 595 EEVEVPELNPLKGSQRDQ-----KMSELLQALETLTRVARHLRAQRDKGGALELEGVEVR 649
Query: 700 FLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKL 759
DE V +++ E M+ AN A I +FP ALLR HP P
Sbjct: 650 AQLDEEKNITALVPKQPLEVHETVAECMIYANHWVARKIQESFPHHALLRHHPPPKQEFF 709
Query: 760 REFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSG 819
HG +DT S+ SLE+A + D ++ +L AT+ M A YF +G
Sbjct: 710 NHLIDSAKAHGFSIDTRSNRALADSLERAVD--PRDPLVNRLLRMMATQAMSNALYFSTG 767
Query: 820 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
++ + HY LA YTHFTSP+RRY D++VHR L AA++ EK
Sbjct: 768 SCPEE-QYYHYGLALARYTHFTSPIRRYADVIVHRLLMAAVQLEK 811
Score = 44.3 bits (103), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 158 KIFAPHWSMEAVNEALEKGDAFKALYRVNAHN-RLEAYCKIEG-------VQTDVLITGI 209
K++ H E + ++ G + + VN H + EA+ + EG + +DVLI G
Sbjct: 217 KVYTEHLPAEVLEAGIKSGRYIQGILSVNKHRAQHEAFVRYEGSASKNTELNSDVLINGA 276
Query: 210 AAQNRAVEGDFVLIKV 225
+NRAV GD V+I++
Sbjct: 277 KHRNRAVHGDVVVIEL 292
>gi|134055287|emb|CAK96177.1| unnamed protein product [Aspergillus niger]
Length = 1021
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 191/563 (33%), Positives = 277/563 (49%), Gaps = 69/563 (12%)
Query: 316 SDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQW 375
+D TE V S ++ + R + SS +PT +VV +++R+ R+ VG ++
Sbjct: 347 TDDTEAVVSERERKALQEEVRKAHGKSSEGKPQPTAKVVGVMKRNWRQ--YVGHVDA--- 401
Query: 376 FNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATI 435
G + A R ++ + + P + PK+ V + D + +R
Sbjct: 402 ----GSAGAQASSGRR------QQTVFVLPMDKRVPKIRVRTRQAGDLMGQR-------- 443
Query: 436 EMELVAARIDEWNEESPFPQAHVLHVFG----RGGEVEPQINAILYENAICCSGFSPESL 491
+ ID W+ +S +P H + G +G E E A+L E + F L
Sbjct: 444 ----ILVTIDAWDRDSRYPTGHFIRSLGELETKGAETE----ALLLEYDVQYKPFPKAVL 495
Query: 492 SCLPCV--PWEVPQEE----LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVG 545
CLP W VP + R+DLR+ I +IDP D+DDAL L +G VG
Sbjct: 496 DCLPAEGHDWRVPASKDNIGWKGRRDLRDLLICSIDPPGCQDIDDALHARPLPNGNFEVG 555
Query: 546 VHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIF 605
VHIADVS+FV P A+D+EA +R T+VY++ ++I MLP LL ++ SL P V+R AFS+
Sbjct: 556 VHIADVSHFVKPNNAMDLEASLRGTTVYLVDKRIDMLPHLLGTDLCSLKPYVERYAFSVL 615
Query: 606 WDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWS 665
W++ +VV ++VIRS SYE AQ ID D + L E
Sbjct: 616 WEMTPDAEVVSADFTKSVIRSREAFSYEKAQKRID---DPTQKDELTE------------ 660
Query: 666 DVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF--DEYGTPYDSVLS-GREDLNFL 722
S+++L SKIL+ KR GAL L + + DE G P V + + N L
Sbjct: 661 ----SMRTLLRFSKILRQKRMDAGALNLASPEVRIETDNDEVGDPLTDVKTKAMLETNSL 716
Query: 723 FEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF-EAFCSKHGLQLDTSSSGQF 781
EEFML AN T A I F +A+LRRH P + E K ++LD SSS
Sbjct: 717 VEEFMLHANITVASKIYSTFSQTAMLRRHATPPPQNFEELINQLTKKRDMRLDVSSSRAL 776
Query: 782 HQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHF 840
SL++ + + F+ L+ ATR M A YFC+G ++++ HY LA P+YTHF
Sbjct: 777 ADSLDRC---VDEKNPFFNTLVRILATRCMTSAEYFCAGAHA-ESEFRHYGLASPIYTHF 832
Query: 841 TSPLRRYPDLVVHRTLNAALEAE 863
TSP+RRY DL+VHR L +A+ E
Sbjct: 833 TSPIRRYADLLVHRQLASAIGYE 855
Score = 42.7 bits (99), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 155 ARCKIFAP-HWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQN 213
AR ++F P ++SM + + G + ++ V+ +N LE + +LI G N
Sbjct: 249 ARGELFYPEYYSMSKLMTGIRAGTLHQGVFNVSPYNYLEGSVNVPAFDKPLLILGRDNSN 308
Query: 214 RAVEGDFVLIKV 225
RA+ GD V+I+V
Sbjct: 309 RAISGDVVVIEV 320
>gi|225679717|gb|EEH18001.1| ribonuclease R [Paracoccidioides brasiliensis Pb03]
Length = 950
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 192/563 (34%), Positives = 277/563 (49%), Gaps = 72/563 (12%)
Query: 317 DSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWF 376
+ E V + ++ + R + + ++ +PT RVV I++R+ W
Sbjct: 262 EEKEAVVTEKERRALQVEVRKAHVKTTEGRPQPTARVVGIVKRN--------------WR 307
Query: 377 NYKGGSRKDAKKNRSSLSVPDR--EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDAT 434
Y G K + ++ P R + + + P + PK+ + + + +R
Sbjct: 308 QYVGNIDKISTAAQAQ---PGRRQQTVFVIPMDKRIPKIRIRTRQAQELFGQR------- 357
Query: 435 IEMELVAARIDEWNEESPFPQAHVLHVFG----RGGEVEPQINAILYENAICCSGFSPES 490
+ +D W+ +S +P H + G +G E E A+L E + F
Sbjct: 358 -----ILVTVDAWDRDSRYPTGHFVRSLGELETKGAETE----ALLLEYDVQYRPFPQIV 408
Query: 491 LSCLPCVP--WEVPQE----ELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRV 544
L CLP W+VPQ RKDLR + +IDP D+DDAL L +G V
Sbjct: 409 LDCLPPEGHNWKVPQNMDDPGWHDRKDLRELLVCSIDPPGCQDIDDALHARPLPNGNIEV 468
Query: 545 GVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSI 604
GVHIADVS+FV P T +D EA +R T+VY++ ++I MLP+LL ++ SL P V R AFS
Sbjct: 469 GVHIADVSHFVKPNTPMDTEASMRGTTVYLVDKRIDMLPMLLGTDLCSLKPHVQRYAFST 528
Query: 605 FWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEW 664
W++ + +VV ++VI S SYE AQ ID D+ ++ L E
Sbjct: 529 IWEMTPSAEVVSSSCTKSVIFSREAFSYEQAQLRID---DISKTDELTE----------- 574
Query: 665 SDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLS-GREDLNFL 722
S+++L ++SK+LK KR GAL L + + D E P V + + N L
Sbjct: 575 -----SMRTLSKLSKLLKQKRMDAGALNLASPEVRIETDSELSDPVADVKTKALLETNSL 629
Query: 723 FEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCS-KHGLQLDTSSSGQF 781
EEFMLLAN T A I +AFP +A+LRRH P E A S K + LD SSS
Sbjct: 630 VEEFMLLANITVASKIFKAFPQTAMLRRHATPPPSNFEELIAQLSKKRNMTLDVSSSLAL 689
Query: 782 HQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHF 840
SL++ + F+ LI ATR M A YFC+G ++++ HY LA P+YTHF
Sbjct: 690 ATSLDRCVDPANP---FFNTLIRILATRCMTSAEYFCAGAHA-ESEFRHYGLASPIYTHF 745
Query: 841 TSPLRRYPDLVVHRTLNAALEAE 863
TSP+RRY DLVVHR L AA+ E
Sbjct: 746 TSPIRRYADLVVHRQLAAAIGYE 768
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 52/102 (50%), Gaps = 3/102 (2%)
Query: 150 SHQSEA-RCKIFAP-HWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLIT 207
+H S A R ++F P ++S+ + L G + +++V+ +N LE ++ + +LI
Sbjct: 157 AHSSRATRGQLFYPEYYSISKMMTGLRAGTLHQGVFKVSPYNYLEGSVQVAAFEKSLLIL 216
Query: 208 GIAAQNRAVEGDFVLIKVDRLSLW-AKMKGFSNNSSIVEDSN 248
G NRA+ GD V+++V W A + ++ +D N
Sbjct: 217 GRDNSNRAISGDIVVVEVLPKDQWKAPSTKIVDEETVTKDEN 258
>gi|350638276|gb|EHA26632.1| hypothetical protein ASPNIDRAFT_172838 [Aspergillus niger ATCC
1015]
Length = 1033
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 193/563 (34%), Positives = 279/563 (49%), Gaps = 69/563 (12%)
Query: 316 SDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQW 375
+D TE V S ++ + R + SS +PT +VV +++R+ R+ VG ++
Sbjct: 347 TDDTEAVVSERERKALQEEVRKAHGKSSEGKPQPTAKVVGVMKRNWRQ--YVGHVDA--- 401
Query: 376 FNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATI 435
G + A R ++ + + P + PK+ V + D + +R+
Sbjct: 402 ----GSAGAQASSGRR------QQTVFVLPMDKRVPKIRVRTRQAGDLMGQRI------- 444
Query: 436 EMELVAARIDEWNEESPFPQAHVLHVFG----RGGEVEPQINAILYENAICCSGFSPESL 491
LV ID W+ +S +P H + G +G E E A+L E + F L
Sbjct: 445 ---LVT--IDAWDRDSRYPTGHFIRSLGELETKGAETE----ALLLEYDVQYKPFPKAVL 495
Query: 492 SCLPCV--PWEVPQEE----LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVG 545
CLP W VP + R+DLR+ I +IDP D+DDAL L +G VG
Sbjct: 496 DCLPAEGHDWRVPASKDNIGWKGRRDLRDLLICSIDPPGCQDIDDALHARPLPNGNFEVG 555
Query: 546 VHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIF 605
VHIADVS+FV P A+D+EA +R T+VY++ ++I MLP LL ++ SL P V+R AFS+
Sbjct: 556 VHIADVSHFVKPNNAMDLEASLRGTTVYLVDKRIDMLPHLLGTDLCSLKPYVERYAFSVL 615
Query: 606 WDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWS 665
W++ +VV ++VIRS SYE AQ ID D + L E
Sbjct: 616 WEMTPNAEVVSADFTKSVIRSREAFSYEKAQKRID---DPTQKDELTE------------ 660
Query: 666 DVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF--DEYGTPYDSVLS-GREDLNFL 722
S+++L SKIL+ KR GAL L + + DE G P V + + N L
Sbjct: 661 ----SMRTLLRFSKILRQKRMDAGALNLASPEVRIETDNDEVGDPLTDVKTKAMLETNSL 716
Query: 723 FEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF-EAFCSKHGLQLDTSSSGQF 781
EEFML AN T A I F +A+LRRH P + E K ++LD SSS
Sbjct: 717 VEEFMLHANITVASKIYSTFSQTAMLRRHATPPPQNFEELINQLTKKRDMRLDVSSSRAL 776
Query: 782 HQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHF 840
SL++ + + F+ L+ ATR M A YFC+G ++++ HY LA P+YTHF
Sbjct: 777 ADSLDRC---VDEKNPFFNTLVRILATRCMTSAEYFCAGAHA-ESEFRHYGLASPIYTHF 832
Query: 841 TSPLRRYPDLVVHRTLNAALEAE 863
TSP+RRY DL+VHR L +A+ E
Sbjct: 833 TSPIRRYADLLVHRQLASAIGYE 855
Score = 42.7 bits (99), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 155 ARCKIFAP-HWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQN 213
AR ++F P ++SM + + G + ++ V+ +N LE + +LI G N
Sbjct: 249 ARGELFYPEYYSMSKLMTGIRAGTLHQGVFNVSPYNYLEGSVNVPAFDKPLLILGRDNSN 308
Query: 214 RAVEGDFVLIKV 225
RA+ GD V+I+V
Sbjct: 309 RAISGDVVVIEV 320
>gi|317026214|ref|XP_001389177.2| exosome complex exonuclease DIS3 [Aspergillus niger CBS 513.88]
Length = 1033
Score = 263 bits (672), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 193/563 (34%), Positives = 279/563 (49%), Gaps = 69/563 (12%)
Query: 316 SDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQW 375
+D TE V S ++ + R + SS +PT +VV +++R+ R+ VG ++
Sbjct: 347 TDDTEAVVSERERKALQEEVRKAHGKSSEGKPQPTAKVVGVMKRNWRQ--YVGHVDA--- 401
Query: 376 FNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATI 435
G + A R ++ + + P + PK+ V + D + +R+
Sbjct: 402 ----GSAGAQASSGRR------QQTVFVLPMDKRVPKIRVRTRQAGDLMGQRI------- 444
Query: 436 EMELVAARIDEWNEESPFPQAHVLHVFG----RGGEVEPQINAILYENAICCSGFSPESL 491
LV ID W+ +S +P H + G +G E E A+L E + F L
Sbjct: 445 ---LVT--IDAWDRDSRYPTGHFIRSLGELETKGAETE----ALLLEYDVQYKPFPKAVL 495
Query: 492 SCLPCV--PWEVPQEE----LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVG 545
CLP W VP + R+DLR+ I +IDP D+DDAL L +G VG
Sbjct: 496 DCLPAEGHDWRVPASKDNIGWKGRRDLRDLLICSIDPPGCQDIDDALHARPLPNGNFEVG 555
Query: 546 VHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIF 605
VHIADVS+FV P A+D+EA +R T+VY++ ++I MLP LL ++ SL P V+R AFS+
Sbjct: 556 VHIADVSHFVKPNNAMDLEASLRGTTVYLVDKRIDMLPHLLGTDLCSLKPYVERYAFSVL 615
Query: 606 WDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWS 665
W++ +VV ++VIRS SYE AQ ID D + L E
Sbjct: 616 WEMTPDAEVVSADFTKSVIRSREAFSYEKAQKRID---DPTQKDELTE------------ 660
Query: 666 DVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF--DEYGTPYDSVLS-GREDLNFL 722
S+++L SKIL+ KR GAL L + + DE G P V + + N L
Sbjct: 661 ----SMRTLLRFSKILRQKRMDAGALNLASPEVRIETDNDEVGDPLTDVKTKAMLETNSL 716
Query: 723 FEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF-EAFCSKHGLQLDTSSSGQF 781
EEFML AN T A I F +A+LRRH P + E K ++LD SSS
Sbjct: 717 VEEFMLHANITVASKIYSTFSQTAMLRRHATPPPQNFEELINQLTKKRDMRLDVSSSRAL 776
Query: 782 HQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHF 840
SL++ + + F+ L+ ATR M A YFC+G ++++ HY LA P+YTHF
Sbjct: 777 ADSLDRC---VDEKNPFFNTLVRILATRCMTSAEYFCAGAHA-ESEFRHYGLASPIYTHF 832
Query: 841 TSPLRRYPDLVVHRTLNAALEAE 863
TSP+RRY DL+VHR L +A+ E
Sbjct: 833 TSPIRRYADLLVHRQLASAIGYE 855
Score = 42.7 bits (99), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 155 ARCKIFAP-HWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQN 213
AR ++F P ++SM + + G + ++ V+ +N LE + +LI G N
Sbjct: 249 ARGELFYPEYYSMSKLMTGIRAGTLHQGVFNVSPYNYLEGSVNVPAFDKPLLILGRDNSN 308
Query: 214 RAVEGDFVLIKV 225
RA+ GD V+I+V
Sbjct: 309 RAISGDVVVIEV 320
>gi|328849010|gb|EGF98200.1| hypothetical protein MELLADRAFT_54248 [Melampsora larici-populina
98AG31]
Length = 992
Score = 263 bits (672), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 191/539 (35%), Positives = 272/539 (50%), Gaps = 67/539 (12%)
Query: 342 SSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYI 401
SS +++PTG+VV I++R N + + S +SSLS +
Sbjct: 363 SSTHSRQPTGKVVGILKR-----------NWRPYVCHLDPSSIPPSALQSSLSA---YAV 408
Query: 402 QLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHV 461
TP PK+ + + AT+ + V ID W+ S +P+ H +
Sbjct: 409 FATPLSRLIPKIRIRTRQA------------ATLANQKVLISIDSWDVNSRYPEGHFVRA 456
Query: 462 FGRGGEVEPQINAILYENAICCSGFSPESLSCLP--CVPWEVPQEELLS-----RKDLRN 514
G E + ++L E + FS L CLP W VP++ S R+D RN
Sbjct: 457 LGVVESKEAEQESLLLEFDVPYRPFSQAILDCLPESGDKWVVPEKTSSSKLWKDREDFRN 516
Query: 515 FCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYM 574
I +IDP D+DDAL ++LS+G VGVHIADVS+FVLP T +D EA R T+VY+
Sbjct: 517 LMICSIDPPGCQDIDDALHAKKLSNGNIEVGVHIADVSHFVLPDTPMDFEAASRGTTVYL 576
Query: 575 LQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLN-SAGDVVDRWIGRTVIRSCCKLSYE 633
+ ++I MLP LL + SL P V+RLAFS+ W+L+ + V+ R+VI+S +YE
Sbjct: 577 VDKRIDMLPSLLGTNLCSLKPYVERLAFSVIWELSPETSEFVNVRFTRSVIQSKAAFTYE 636
Query: 634 HAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSD-VVRSIKSLYEVSKILKDKRFTDGALR 692
AQ+ D K E SD + SI+ L +++ LK R GAL
Sbjct: 637 EAQNRKDNK--------------------ELSDEITESIRLLNDLAIKLKAARMRAGALN 676
Query: 693 LENSKPVFLFD--EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRR 750
L + + + E P D + N L EEFMLLAN + A+ I +FP +A+LRR
Sbjct: 677 LASPEVKIQMESSESSDPVDVEQKEARETNSLVEEFMLLANISVAKRIYESFPLTAVLRR 736
Query: 751 H---PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YA 806
H P N L+ + + G+ LD+SSSG SL+ + ++ F+ L+ A
Sbjct: 737 HNPPPKTNFEVLQ--DVLMKRRGMVLDSSSSGALANSLDNC---IDPEWPTFNTLVRIMA 791
Query: 807 TRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 865
TR M A YF SG DT +GHY LA P+YTHFTSP+RRY D++VHR L+AA+ L
Sbjct: 792 TRCMLPAEYFASGSVSKDT-YGHYGLASPIYTHFTSPIRRYADVLVHRQLSAAITQSPL 849
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R I+ + SM +N L ++ +R N +N LE + +L+ G A NR+
Sbjct: 243 RMSIYEDYLSMSDLNAGLSLKSLYQGKFRTNQYNYLEGSIFHPEFEKPILLIGKEAMNRS 302
Query: 216 VEGDFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEA 253
++GD V++++ W ++ +V D +LP A
Sbjct: 303 IDGDDVVVELLPEDEWK-----TSTDEVVVDHDLPNAA 335
>gi|226291462|gb|EEH46890.1| mitotic control protein dis3 [Paracoccidioides brasiliensis Pb18]
Length = 1037
Score = 263 bits (672), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 192/560 (34%), Positives = 276/560 (49%), Gaps = 72/560 (12%)
Query: 320 EKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYK 379
E V + ++ + R + + ++ +PT RVV I++R+ W Y
Sbjct: 352 EAVVTEKERRALQVEVRKAHVKTTEGRPQPTARVVGIVKRN--------------WRQYV 397
Query: 380 GGSRKDAKKNRSSLSVPDR--EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEM 437
G K + ++ P R + + + P + PK+ + + + +R
Sbjct: 398 GNIDKISTAAQAQ---PGRRQQTVFVIPMDKRIPKIRIRTRQAQELFGQR---------- 444
Query: 438 ELVAARIDEWNEESPFPQAHVLHVFG----RGGEVEPQINAILYENAICCSGFSPESLSC 493
+ +D W+ +S +P H + G +G E E A+L E + F L C
Sbjct: 445 --ILVTVDAWDRDSRYPTGHFVRSLGELETKGAETE----ALLLEYDVQYRPFPQIVLDC 498
Query: 494 LPCVP--WEVPQE----ELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVH 547
LP W+VPQ RKDLR + +IDP D+DDAL L +G VGVH
Sbjct: 499 LPPEGHNWKVPQNMDDPGWHDRKDLRELLVCSIDPPGCQDIDDALHARPLPNGNIEVGVH 558
Query: 548 IADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWD 607
IADVS+FV P T +D EA +R T+VY++ ++I MLP+LL ++ SL P V R AFS W+
Sbjct: 559 IADVSHFVKPNTPMDTEASMRGTTVYLVDKRIDMLPMLLGTDLCSLKPHVQRYAFSTIWE 618
Query: 608 LNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDV 667
+ + +VV ++VI S SYE AQ ID D+ ++ L E
Sbjct: 619 MTPSAEVVSSSCTKSVIFSREAFSYEQAQLRID---DISKTDELTE-------------- 661
Query: 668 VRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLS-GREDLNFLFEE 725
S+++L ++SK+LK KR GAL L + + D E P V + + N L EE
Sbjct: 662 --SMRTLSKLSKLLKQKRMDAGALNLASPEVRIETDSELSDPVADVKTKALLETNSLVEE 719
Query: 726 FMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCS-KHGLQLDTSSSGQFHQS 784
FMLLAN T A I +AFP +A+LRRH P E A S K + LD SSS S
Sbjct: 720 FMLLANITVASKIFKAFPKTAMLRRHATPPPSNFEELIAQLSKKRNMTLDVSSSLALATS 779
Query: 785 LEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSP 843
L++ + F+ LI ATR M A YFC+G ++++ HY LA P+YTHFTSP
Sbjct: 780 LDRCVDPANP---FFNTLIRILATRCMTSAEYFCAGAHA-ESEFRHYGLASPIYTHFTSP 835
Query: 844 LRRYPDLVVHRTLNAALEAE 863
+RRY DLVVHR L AA+ E
Sbjct: 836 IRRYADLVVHRQLAAAIGYE 855
Score = 45.8 bits (107), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 52/102 (50%), Gaps = 3/102 (2%)
Query: 150 SHQSEA-RCKIFAP-HWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLIT 207
+H S A R ++F P ++S+ + L G + +++V+ +N LE ++ + +LI
Sbjct: 244 AHSSRATRGQLFYPEYYSISKMMTGLRAGTLHQGVFKVSPYNYLEGSVQVAAFEKSLLIL 303
Query: 208 GIAAQNRAVEGDFVLIKVDRLSLW-AKMKGFSNNSSIVEDSN 248
G NRA+ GD V+++V W A + ++ +D N
Sbjct: 304 GRDNSNRAISGDIVVVEVLPKDQWKAPSTKIVDEETVTKDEN 345
>gi|346974997|gb|EGY18449.1| mitotic control protein dis3 [Verticillium dahliae VdLs.17]
Length = 984
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 210/717 (29%), Positives = 317/717 (44%), Gaps = 123/717 (17%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
++ ++SM + + G + ++ V+ +N LE K+ +LI G +RA+ G
Sbjct: 250 LYPEYYSMSKMMTGTKAGLLHQGIFNVSPYNYLEGSIKVPSFVKPLLILGRENISRAING 309
Query: 219 DFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCTL 278
D V+++V LP E ++ + +
Sbjct: 310 DLVVVEV-----------------------LPKE-----------------QWKEPSTKI 329
Query: 279 LSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLS 338
+ E+ I ++++ E G + ++ K + S +G
Sbjct: 330 IEEETITRNENADDEG---------GSDLVSARERKALQEEVKKTQSHSTEG-------- 372
Query: 339 AMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDR 398
+PT +VV +I+R+ W Y G + ++S +
Sbjct: 373 -------RPQPTAKVVGVIKRN--------------WRQYVGHI-DPSSTSQSGTQGRRQ 410
Query: 399 EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHV 458
E + L P PK+ + + + + KRL ID W +S P H
Sbjct: 411 ENVFLIPMDKCIPKIRIRTRQAAELLGKRL------------VVTIDAWERDSRHPVGHF 458
Query: 459 LHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC------VPWEVPQEELLSRKDL 512
+ G + + A+L E+ + F L CLP VP + R+DL
Sbjct: 459 VRSLGELETKQAETEALLLEHDVQYRPFPKTVLDCLPKEGHDWRVPTSLDDPGWRGREDL 518
Query: 513 RNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSV 572
R+ I +IDP D+DDAL L +G VGVHIADVS FV P TA+D EA +R TSV
Sbjct: 519 RSLLICSIDPIGCQDIDDALHARSLPNGNYEVGVHIADVSNFVKPLTAMDNEASIRGTSV 578
Query: 573 YMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSY 632
Y++ ++I MLP+LL ++ SLNP ++R AFS+ W+L+ D+V+ ++VI+S LSY
Sbjct: 579 YLVDKRIDMLPMLLGTDLCSLNPYIERFAFSVIWELDENADMVNVRFTKSVIKSREALSY 638
Query: 633 EHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALR 692
E AQ +D D ++ L +G I+ L ++S+ LK KR GAL
Sbjct: 639 EAAQLRVD---DASQTDELTQG----------------IRMLMKLSRKLKQKRMDAGALS 679
Query: 693 LENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH 751
L + + V + E P D D L EEFML AN + A I AFP +A+LRRH
Sbjct: 680 LSSPEVKVQMESETSDPIDVKTKELLDTMSLVEEFMLFANVSVAAKIYEAFPQTAILRRH 739
Query: 752 PAPNMRKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRP 809
AP E K GL+L SS SL+ + + F+ L+ ATR
Sbjct: 740 GAPPKTNFDELANQLKVKKGLELRVDSSKALADSLDTC---VDPENPFFNTLVRIMATRC 796
Query: 810 MQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
M A YFCSG D ++ HY LA +YTHFTSP+RRY DL HR L AA+ E ++
Sbjct: 797 MMSAEYFCSGTQTYD-EFRHYGLASEIYTHFTSPIRRYADLQAHRQLAAAIGYEAVH 852
>gi|336366467|gb|EGN94814.1| hypothetical protein SERLA73DRAFT_171208 [Serpula lacrymans var.
lacrymans S7.3]
gi|336379157|gb|EGO20313.1| hypothetical protein SERLADRAFT_452990 [Serpula lacrymans var.
lacrymans S7.9]
Length = 995
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 193/558 (34%), Positives = 268/558 (48%), Gaps = 74/558 (13%)
Query: 341 ISSYPT-KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNY--KGGSRKDAKKNRSSLSVPD 397
IS PT K+PTGRVV +I+R+ W Y S N +SLS
Sbjct: 367 ISKRPTEKQPTGRVVGVIKRN--------------WRAYVCHIDSTSLTSTNATSLS--- 409
Query: 398 REYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAH 457
++ + TP P++ + + P I ++ + ID W S +P+ H
Sbjct: 410 QQTVFATPVSRLLPRIRLRTRQAPSLIGQK------------ILVTIDRWESTSRYPEGH 457
Query: 458 VLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQE-----ELLSRK 510
+ G+ E + ++L E + F L CLP W VP + E R+
Sbjct: 458 FVRALGKAESKEAEQESLLLEFEVPYRPFGKAILDCLPSEGEQWVVPPKSDRSPEWRDRE 517
Query: 511 DLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRST 570
DLR I +IDP D+DDAL RLS+G GVHIADVS+FV T +D EA R T
Sbjct: 518 DLRGLIICSIDPPGCQDIDDALHARRLSNGNIEAGVHIADVSHFVHSDTPMDSEAASRGT 577
Query: 571 SVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKL 630
+VY++ ++I MLP LL + SL P V+RLAFS W++ ++V+ ++VI S
Sbjct: 578 TVYLVDKRIDMLPALLGTNLCSLRPYVERLAFSAIWEMTPEAEIVNVRFTKSVIASKAAF 637
Query: 631 SYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGA 690
+YE AQ D P L ++ +SI+ L +++ LK R GA
Sbjct: 638 TYEEAQIRKDD--------------PHLQ-----DELTQSIRLLNSLAQKLKAGRMAAGA 678
Query: 691 LRLENSKPVFLFD--EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALL 748
L L + + D E P D + N L EEFMLLAN + A+ I FP +A+L
Sbjct: 679 LNLASPEVKIHLDSSESSDPIDVEQKEMRETNSLVEEFMLLANVSVAKKIQDTFPQTAVL 738
Query: 749 RRH---PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN- 804
RRH P N KL++ + GL LD SSSG SL++ + F+ L+
Sbjct: 739 RRHLPPPRTNFEKLQDI--LQKRKGLTLDVSSSGALAASLDKC---IDAKEPAFNTLVRI 793
Query: 805 YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
ATR M A YF SG DT +GHY LA P+YTHFTSP+RRY D++ HR L+AA+
Sbjct: 794 MATRCMLSAEYFSSGSVSRDT-FGHYGLASPIYTHFTSPIRRYADVLAHRQLSAAIG--- 849
Query: 865 LYWKHRRMLPKNNHREGV 882
+W L H E V
Sbjct: 850 -FWPLHATLHSKAHVERV 866
>gi|338210808|ref|YP_004654857.1| ribonuclease R [Runella slithyformis DSM 19594]
gi|336304623|gb|AEI47725.1| ribonuclease R [Runella slithyformis DSM 19594]
Length = 786
Score = 263 bits (671), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 160/449 (35%), Positives = 238/449 (53%), Gaps = 24/449 (5%)
Query: 420 LPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYEN 479
+P++ K ++GD V R+ ++ S + V+ V G+ G E +++AIL E
Sbjct: 197 IPETKLKGAQDGDK------VLIRLTQYATRSRRMEGEVVEVLGKAGSHETEMHAILAEF 250
Query: 480 AICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSD 539
+ F E + +P + EE+ R+D+R+ FTIDP+ A D DDALS+ L +
Sbjct: 251 GLPIR-FPEELEAEANAIPDTISAEEIGRRRDMRDITTFTIDPADAKDFDDALSVRFLDN 309
Query: 540 GISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDR 599
G +G+HIADV+++V PGTAL+ EA R+TSVY++ R +PMLP LS + SL P D+
Sbjct: 310 GNYEIGIHIADVTHYVRPGTALEQEAYARATSVYLVDRTVPMLPEKLSNNLCSLRPNEDK 369
Query: 600 LAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLY 659
L FS+ ++ + W GRTVI S + SYE AQ+I++ + + + EG+ L
Sbjct: 370 LTFSVVVEMTPDAKIKHEWFGRTVIHSDKRFSYEEAQEILEMQAATDKAAK-EEGFVDLS 428
Query: 660 GQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDL 719
++ + + L ++ L+ +RF GA+ E + F DE G P R+D
Sbjct: 429 APLPYA---KELTLLNTLALQLRAERFAKGAVNFETVEVKFRLDEAGKPLGIYTKVRKDA 485
Query: 720 NFLFEEFMLLANKTAAEVIAR-----AFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLD 774
+ L EEFMLLANK E I R A P++ + R H P+M KLR F AF + G +L
Sbjct: 486 HKLIEEFMLLANKRVPEFIQRQSKDKAHPNTMVYRIHEEPDMEKLRVFAAFAGRLGYKLK 545
Query: 775 TSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAF 834
+ QSL E+L+ + L A R M A Y D GH+ LAF
Sbjct: 546 LENEKVAAQSLNHLMEELEGKPEQ-NALEQLAIRTMAKARYSTE-------DVGHFGLAF 597
Query: 835 PVYTHFTSPLRRYPDLVVHRTLNAALEAE 863
Y+HFTSP+RRYPD++ HR L L+ +
Sbjct: 598 RRYSHFTSPIRRYPDMMAHRLLQHYLDGK 626
>gi|336267066|ref|XP_003348299.1| hypothetical protein SMAC_02796 [Sordaria macrospora k-hell]
gi|380091953|emb|CCC10219.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 984
Score = 263 bits (671), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 186/527 (35%), Positives = 259/527 (49%), Gaps = 60/527 (11%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PT +VV II+R+ R+ VG ++ + + G ++D+ + + P
Sbjct: 376 PTAKVVGIIKRNWRQ--YVGHIDQSSVSSSGQGRKQDS--------------VFVIPMDK 419
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
K PK+ + + + + + KR + ID W+ S P H + G
Sbjct: 420 KIPKIRLRTRQVAELLGKR------------ILVTIDAWDRTSRHPTGHFVRSLGELETK 467
Query: 469 EPQINAILYENAICCSGFSPESLSCLP--CVPWEVPQEE----LLSRKDLRNFCIFTIDP 522
+ A+L E + F L CLP W+VP R+DLR+ I +IDP
Sbjct: 468 AAETEALLLEYDVQYRPFPKTVLDCLPKEGHDWKVPASMDDPGWRDRQDLRDLLICSIDP 527
Query: 523 STATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPML 582
D+DDAL L +G VGVHIADVS+FV P A+D EA +R T+VY++ ++I ML
Sbjct: 528 IGCQDIDDALHARALPNGNFEVGVHIADVSHFVKPNNAMDTEASIRGTTVYLVDKRIDML 587
Query: 583 PVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
P+LL ++ SL P V+R AFS+ W++NS D+V ++VI+S SYE AQ ID
Sbjct: 588 PMLLGTDLCSLKPYVERYAFSVIWEMNSNADIVGSRFTKSVIKSREAFSYEQAQLRID-- 645
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFL 701
D + L SI++L E+SK LK KR GAL L + + V +
Sbjct: 646 -DASQQDEL----------------TNSIRTLLELSKKLKQKRLDAGALSLSSPEIKVHM 688
Query: 702 FDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLRE 761
E P D L EEFMLLAN + A I AFP +A+LRRH AP E
Sbjct: 689 ESETSDPIDVKTKEHLPTMSLVEEFMLLANTSVAAKIYEAFPQTAILRRHAAPPKTNFDE 748
Query: 762 F-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSG 819
K GL L SS SL+ + + F+ LI ATR M A YFCSG
Sbjct: 749 LANQLRVKKGLDLSVESSRALADSLDLCVDPKEP---FFNTLIRIMATRCMMSAEYFCSG 805
Query: 820 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
+ ++ HY LA +YTHFTSP+RRY DL+ HR L AA+E E ++
Sbjct: 806 T-QSYPEFRHYGLASEIYTHFTSPIRRYADLMAHRQLAAAIEYEAVH 851
Score = 40.8 bits (94), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 38/67 (56%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
++ ++++ +N ++ G + ++ V+ +N LE ++ +LI G NRAV+G
Sbjct: 250 LYPEYYTLSKMNTGVKNGLLHQGIFNVSPYNYLEGSIRVPAFPKALLILGRENINRAVDG 309
Query: 219 DFVLIKV 225
D V+++V
Sbjct: 310 DLVVVEV 316
>gi|259149463|emb|CAY86267.1| Dis3p [Saccharomyces cerevisiae EC1118]
Length = 1001
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 232/751 (30%), Positives = 342/751 (45%), Gaps = 136/751 (18%)
Query: 160 FAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEGD 219
F ++S V L+ G ++ +++ +N LE + VLI G NRA GD
Sbjct: 255 FPEYYSTARVMGGLKNGVLYQGNIQISEYNFLEGSVSLPRFSKPVLIVGQKNLNRAFNGD 314
Query: 220 FVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCTLL 279
V++++ S W SSIV DS H D+ D+
Sbjct: 315 QVIVELLPQSEWKA------PSSIVLDSE--------HFDV---NDNPDI---------- 347
Query: 280 SEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSA 339
E G DDD ++E +S +T +S Q+ + A
Sbjct: 348 -EAG---DDDDNNE---------------------SSSNTTVISDKQRR-----LLAKDA 377
Query: 340 MISSYPTK-RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDR 398
MI+ K +PT +VV I RS W Y G + +SS +
Sbjct: 378 MIAQRSKKIQPTAKVVYIQRRS--------------WRQYVGQLAPSSVDPQSSST---- 419
Query: 399 EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHV 458
+ + + H PK+ + + + + KR + ID W +P H
Sbjct: 420 QNVFVILMHKCLPKVRIRTRRAAELLDKR------------IVISIDSWPTTHKYPLGHF 467
Query: 459 LHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV------------PWEVPQEEL 506
+ G + + A+L E+ + FS + L CLP P V ++ L
Sbjct: 468 VRDLGTIESAQAETEALLLEHDVEYRPFSKKVLECLPAEGHDWKAPTKLDDPEAVSKDPL 527
Query: 507 LS-RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEA 565
L+ RKDLR+ I +IDP D+DDAL ++L +G VGVHIADV++FV PGTALD E
Sbjct: 528 LTKRKDLRDKLICSIDPPGCVDIDDALHAKKLPNGNWEVGVHIADVTHFVKPGTALDAEG 587
Query: 566 QVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIR 625
R TSVY++ ++I MLP+LL ++ SL P VDR AFS+ W+L+ + ++V+ ++VIR
Sbjct: 588 AARGTSVYLVDKRIDMLPMLLGTDLCSLKPYVDRFAFSVIWELDDSANIVNVNFMKSVIR 647
Query: 626 SCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKR 685
S SYE AQ ID K ++ L G +++L ++S LK KR
Sbjct: 648 SREAFSYEQAQLRIDDK---TQNDELTMG----------------MRALLKLSVKLKQKR 688
Query: 686 FTDGALRLENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPD 744
GAL L + + V + E P + + N L EEFMLLAN + A I AFP
Sbjct: 689 LEAGALNLASPEVKVHMDSETSDPNEVEIKKLLATNSLVEEFMLLANISVARKIYDAFPQ 748
Query: 745 SALLRRHPAP---NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDI 801
+A+LRRH AP N L E ++ + + SS SL++ + +D Y F+
Sbjct: 749 TAMLRRHAAPPSTNFEILNEM--LNTRKNMSISLESSKALADSLDRCVDP-EDPY--FNT 803
Query: 802 LIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
L+ +TR M A YF SG + D+ HY LA +YTHFTSP+RRY D+V HR L A+
Sbjct: 804 LVRIMSTRCMMAAQYFYSGAYS-YPDFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAI 862
Query: 861 EAEKLYWKHR-----RMLPKNNHREGVRGRF 886
E L HR M+ +N +R+ +F
Sbjct: 863 GYEPLSLTHRDKNKMDMICRNINRKHRNAQF 893
>gi|350646837|emb|CCD58558.1| unnamed protein product [Schistosoma mansoni]
Length = 633
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 159/429 (37%), Positives = 224/429 (52%), Gaps = 86/429 (20%)
Query: 501 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLS-------------DGISRVGVH 547
+ +++ + RKD R +C+FTIDPSTA DLDDAL I +L + VGVH
Sbjct: 222 IREKDFIFRKDFRKYCVFTIDPSTARDLDDALHIRQLEPSEIEKLESSGYRNAFYEVGVH 281
Query: 548 IADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWD 607
IADVSYFV P + +D EA R+TS+Y++Q +PMLP LL EE SLNPG D+LAFS+ +
Sbjct: 282 IADVSYFVKPNSLVDKEAASRATSIYLVQLCVPMLPRLLCEEQCSLNPGEDKLAFSVVFT 341
Query: 608 LNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDV 667
+ ++ W GRT IRSCCKLSYE AQ +D + + D+
Sbjct: 342 VTEDAKILTTWFGRTFIRSCCKLSYEDAQ--VDEPYTI-------------------MDI 380
Query: 668 VRSIKSLYEVSKILKDKRFTDGALRLENSKPVF-LFDEYGTPYDSVLSGREDLNFLFEEF 726
+++ L +++ ++ RF GALRL+ K F L +E G P + N+L EE+
Sbjct: 381 CQNVLKLNDLATKMRKSRFHSGALRLDQVKSTFSLNNETGLPLGIAPYISKQSNWLIEEW 440
Query: 727 MLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSL- 785
ML ANK+ AE +A+ PDSA LRRHP+P++++L E + + G+ ++ S+G S+
Sbjct: 441 MLAANKSVAERLAKYLPDSAFLRRHPSPSVKQLTEVSSSLNVAGININIDSAGSIQNSIC 500
Query: 786 -------------EQAREKLKDDY---VLFD----------------------------- 800
A KL DD+ VL
Sbjct: 501 REAGCNVEVGYHYSDALVKLCDDFMSGVLIHDSHLIEEMKTMDLNSVVQKDKLPLKTLEH 560
Query: 801 ---ILINYA--TRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRT 855
+L+ A T+ M LA YFC G + HYAL +YTHFTSP+RRY D++VHR
Sbjct: 561 EARLLVTVALLTKTMNLAVYFCLGLLPSELSPAHYALNMQLYTHFTSPIRRYADVIVHRQ 620
Query: 856 LNAALEAEK 864
L+A L E+
Sbjct: 621 LSAILAKEE 629
>gi|340720631|ref|XP_003398737.1| PREDICTED: exosome complex exonuclease RRP44-like [Bombus
terrestris]
Length = 981
Score = 262 bits (670), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 190/592 (32%), Positives = 285/592 (48%), Gaps = 83/592 (14%)
Query: 347 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 406
K PTG+VV II R+ R+ + + Q N +G R P
Sbjct: 333 KTPTGKVVGIIRRNWRQ-----YCGILQPSNIEGNVRH-----------------LFVPA 370
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 466
K PK+ + + K+R+ +VA ID W S +P H + G G
Sbjct: 371 ERKIPKIRIETRQYTVLCKQRI----------IVA--IDSWPRNSRYPLGHFVRALGEIG 418
Query: 467 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 526
+ IL E+ I S FS LS LP + W V +L R+DLR + ++DP T
Sbjct: 419 NKITENEVILLEHDIPHSRFSDAVLSSLPEISWSVTDVDLAQREDLRYLDVCSVDPPGCT 478
Query: 527 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 586
D+DDAL L +G VGVHIADV++FV PGTALD EA RST+VY++ +I M+P LL
Sbjct: 479 DIDDALHCRDLPNGNLEVGVHIADVTHFVRPGTALDKEAASRSTTVYLVDTRIHMIPELL 538
Query: 587 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 646
S SL ++L FS W+++ ++++ ++VI S ++Y+ AQ ID DV
Sbjct: 539 STNFCSLREKEEKLTFSCIWEMDRDANIINTRYCKSVICSRAAMTYDEAQLKID---DVT 595
Query: 647 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EY 705
++L V+S+++L ++K LK +R +GAL L + + F D E
Sbjct: 596 QQDSL----------------VKSLRNLNNLAKTLKKRRLDNGALLLASPEVRFEVDCET 639
Query: 706 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAF 765
P + + + N + EEFMLLAN + A+ I FP+ A+LRRHP P
Sbjct: 640 HDPIEVEVKKLRETNSMVEEFMLLANISVAKKILEEFPECAVLRRHPEPPPTNFEPLIKA 699
Query: 766 CSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDD 824
G ++ S + SL + K+ F+ ++ ATR M A YF SG
Sbjct: 700 AKNQGFTINVDSGKELADSLNKCH---KESNPYFNTMLRILATRCMMQAVYFASG-MHQP 755
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY---------------WKH 869
+++ HY LA PVYTHFTSP+RRY D++VHR L A + A+ Y +
Sbjct: 756 SEYYHYGLACPVYTHFTSPIRRYADVIVHRLLAACIGADATYPDLLDKKKIHALCQNMNY 815
Query: 870 RRMLPKNNHREGVRGRFLTGIFYDKDAAESLEG------REALSVAALKYGV 915
R + + ++R V T +F+ ++ + EG + AL + +KYG+
Sbjct: 816 RHRMAQYSNRASV--ALNTHLFF-REKIQDEEGYILFVRKNALQILIIKYGL 864
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 42/75 (56%)
Query: 158 KIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVE 217
+IF H + ++E ++ G + ++ + N LE + ++GV+ + I G + NRAV+
Sbjct: 222 EIFPCHLTPFELHEGIKNGKLVQGTFQASKENFLEGFVNVDGVEKSIFIQGRSNLNRAVD 281
Query: 218 GDFVLIKVDRLSLWA 232
GD V++++ W+
Sbjct: 282 GDAVVVELLPEDQWS 296
>gi|330935111|ref|XP_003304826.1| hypothetical protein PTT_17530 [Pyrenophora teres f. teres 0-1]
gi|311318374|gb|EFQ87077.1| hypothetical protein PTT_17530 [Pyrenophora teres f. teres 0-1]
Length = 989
Score = 262 bits (670), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 188/531 (35%), Positives = 261/531 (49%), Gaps = 67/531 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 407
+PT RVV II+R+ W Y G SS S ++ + L P
Sbjct: 382 QPTARVVGIIKRN--------------WRQYVGHI-DRDSVRSSSKSSRQQQTVFLVPMD 426
Query: 408 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG---- 463
+ PK+ + + + + +R V A ID W+ +S +P H + G
Sbjct: 427 KRIPKIRIRTRQAGELLGQR------------VLATIDSWDRDSRYPVGHFVRSLGELES 474
Query: 464 RGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEE----LLSRKDLRNFCI 517
+G E E A+L E + F L CLP W+VP RKDLR+ +
Sbjct: 475 KGAETE----ALLLEWDVQYKPFPKTVLDCLPAEGHDWKVPASMDDPGWKGRKDLRDLLV 530
Query: 518 FTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 577
+IDP D+DDAL +L +G +VGVHIADVS+FV P A+D EA R T+VY++ +
Sbjct: 531 CSIDPVGCVDIDDALHAHKLPNGNYQVGVHIADVSHFVKPNNAMDKEASQRGTTVYLVDK 590
Query: 578 KIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQD 637
+I MLP+LL ++ SL P V+R AFS+ W++ D+V ++VIRS SYE AQ
Sbjct: 591 RIDMLPMLLGTDLCSLKPYVERYAFSVLWEVTEDADIVSSHFTKSVIRSREAFSYEQAQI 650
Query: 638 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 697
ID + D+ + +++L +SK LK KR GAL L + +
Sbjct: 651 RID-------------------DNSQQDDLTKGMRTLLMLSKKLKQKRMDAGALNLSSPE 691
Query: 698 -PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNM 756
V E P D + D N L EEFMLLAN + A AFP +ALLRRH AP
Sbjct: 692 VKVRTESETSDPVDVETKKQLDTNSLVEEFMLLANISVAAKNYEAFPQTALLRRHAAPPK 751
Query: 757 RKLREFE-AFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLAS 814
E + K G++L T SS SL++ + F+ L+ ATR M A
Sbjct: 752 TNFEELDNQLKVKKGMELKTDSSKALADSLDKC---VDAGNPFFNTLVRIMATRCMMSAE 808
Query: 815 YFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 865
YFC+G + ++ HY LA +YTHFTSP+RRY DL HR L AA+E E+L
Sbjct: 809 YFCAGT-QAYPEFRHYGLASEIYTHFTSPIRRYADLEAHRQLAAAIEYEQL 858
>gi|311748419|ref|ZP_07722204.1| ribonuclease R [Algoriphagus sp. PR1]
gi|126576931|gb|EAZ81179.1| ribonuclease R [Algoriphagus sp. PR1]
Length = 733
Score = 262 bits (670), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 178/568 (31%), Positives = 282/568 (49%), Gaps = 79/568 (13%)
Query: 305 YNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTK--RPTGRVVSIIERSPR 362
+ +I P S+ V + ++ +++ M++ +K +P GRV+ ++ER+
Sbjct: 101 FAFIIPDDPEKSEGDIMVKEADMKQALDG-DKVRVMVNPLKSKFGKPEGRVLEVVERA-- 157
Query: 363 RDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPD 422
RD VG + ++ F + VPD + + + + V DL
Sbjct: 158 RDEFVGRVEISPRF---------------AFVVPDFKKM--------HKDIFVHRGDL-- 192
Query: 423 SIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAIC 482
+ E V ++ EW E P V+ V G G E +I++I+ E +
Sbjct: 193 ---------EGAKHNEKVVVKLTEWREGDKNPTGKVIRVLGEAGLHEVEIHSIMAEFGLP 243
Query: 483 CSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGIS 542
+ E + ++ +E+ SRKD R FTIDP+ A D DDA+S + L +G
Sbjct: 244 FE-YPEEPNKEANAISEKITAKEIKSRKDFRGVPTFTIDPADAKDFDDAISYQVLPNGNL 302
Query: 543 RVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAF 602
+GVHIADV+++V P TAL+ EA R+TSVY++ R IPMLP LS + SL P D+L F
Sbjct: 303 EIGVHIADVTHYVQPKTALEKEAFNRATSVYLVDRTIPMLPERLSNGLCSLRPNEDKLTF 362
Query: 603 SIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQF 662
S ++++ +++ WIGRTVI S + +YE AQ+ ID N G+ + +L
Sbjct: 363 SCVFEMDREANILKHWIGRTVIHSDRRFAYEEAQENID--------NQSGDFFAEL---- 410
Query: 663 EWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFL 722
L +++K ++ KRF +GA+ E + F D+ GTP ++ R+D++ L
Sbjct: 411 ---------TLLNDLAKKVRKKRFNNGAVNFETVEVKFKLDDKGTPLGLIVKERKDIHKL 461
Query: 723 FEEFMLLANKTAAEVIAR--AFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS--- 777
EEFMLLANK AE I + D+ + R H P+M +L F F + G + D +
Sbjct: 462 IEEFMLLANKFVAEFIYKKNKGKDTFVYRTHDFPDMERLDTFSGFAKRFGHEFDIENEQK 521
Query: 778 -SGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPV 836
SG ++ +++ + K + ++L A R M A Y GH+ LAF
Sbjct: 522 ISGALNKLMDEIQGKPEQ-----NVLEQLAIRSMAKAKYTTEPK-------GHFGLAFAH 569
Query: 837 YTHFTSPLRRYPDLVVHRTLNAALEAEK 864
YTHFTSP+RRYPD++VHR L+ L+ K
Sbjct: 570 YTHFTSPIRRYPDMMVHRLLDHYLQGGK 597
>gi|171687865|ref|XP_001908873.1| hypothetical protein [Podospora anserina S mat+]
gi|170943894|emb|CAP69546.1| unnamed protein product [Podospora anserina S mat+]
Length = 1009
Score = 262 bits (670), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 189/564 (33%), Positives = 277/564 (49%), Gaps = 60/564 (10%)
Query: 312 HPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLN 371
+P +S + VS ++ ++R + ++ +PT +VV +I+R+ R+ VG ++
Sbjct: 364 NPDAEESDDFVSERERKALQEEVKRTHSK-TTEGHAQPTAKVVGVIKRNWRQ--YVGHID 420
Query: 372 VNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEG 431
+ RK ++ + + P K PK+ + + + + + KR
Sbjct: 421 QSSVSQSAQQGRK-------------QDSVFVIPMDKKIPKIRLRTRQVSELLGKR---- 463
Query: 432 DATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL 491
+ ID W+ S P H + G + A+L E + F L
Sbjct: 464 --------ILVTIDAWDRSSRHPSGHFVRSLGELETKAAETEALLLEYDVQYRPFPKTVL 515
Query: 492 SCLP--CVPWEVPQE----ELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVG 545
CLP W VPQ R+DLR+ I +IDP D+DDAL L +G VG
Sbjct: 516 DCLPKEGHDWRVPQSLEDPGWKDRQDLRDLLICSIDPIGCQDIDDALHSRPLPNGNFEVG 575
Query: 546 VHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIF 605
VHIADVS+FV PG A+D EA +R T+VY++ ++I MLP+LL ++ SL P V+R AFS+
Sbjct: 576 VHIADVSHFVKPGNAMDAEASIRGTTVYLVDKRIDMLPMLLGTDLCSLKPYVERYAFSVI 635
Query: 606 WDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWS 665
W++ S D+V ++VI+S SYE AQ +D +SS +
Sbjct: 636 WEMTSDADIVGSRFTKSVIKSREAFSYEQAQLRVD-----DSS--------------QQD 676
Query: 666 DVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFLFDEYGTPYDSVLSGREDLNFLFE 724
++ SI++L +SK LK KR GAL L + + V + E P D D L E
Sbjct: 677 ELTTSIRTLLALSKKLKQKRLDAGALSLSSPEVKVQMESETSDPIDVKTKVHLDTMSLVE 736
Query: 725 EFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF-EAFCSKHGLQLDTSSSGQFHQ 783
EFMLLAN + A I AFP +A+LRRH AP E K GL L SS
Sbjct: 737 EFMLLANTSVARRIYEAFPQTAILRRHGAPPKTNFDELANQLKVKRGLDLSVESSRALAD 796
Query: 784 SLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTS 842
SL++ + + F+ L+ ATR M A YFCSG + ++ HY LA +YTHFTS
Sbjct: 797 SLDRC---VDEKEPFFNTLVRIMATRCMMSAEYFCSGT-QAYPEFRHYGLASEIYTHFTS 852
Query: 843 PLRRYPDLVVHRTLNAALEAEKLY 866
P+RRY DL+ HR L AA+E E ++
Sbjct: 853 PIRRYADLMAHRQLAAAIEYEAIH 876
>gi|85111130|ref|XP_963787.1| mitotic control protein dis3 [Neurospora crassa OR74A]
gi|28925520|gb|EAA34551.1| mitotic control protein dis3 [Neurospora crassa OR74A]
Length = 1013
Score = 262 bits (670), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 186/527 (35%), Positives = 258/527 (48%), Gaps = 59/527 (11%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PT +VV +I+R+ R+ VG ++ + + RK ++ + + P
Sbjct: 404 PTAKVVGVIKRNWRQ--YVGHIDQSSVSSSAAQGRK-------------QDSVFVIPMDK 448
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
K PK+ + + + + + KR + ID W+ S P H + G
Sbjct: 449 KIPKIRLRTRQVAELLGKR------------ILVTIDAWDRTSRHPTGHFVRSLGELETK 496
Query: 469 EPQINAILYENAICCSGFSPESLSCLP--CVPWEVPQEE----LLSRKDLRNFCIFTIDP 522
+ A+L E + F L CLP W+VP R+DLR+ I +IDP
Sbjct: 497 AAETEALLLEYDVQYRPFPKTVLDCLPKEGHDWKVPASMDDPGWRDRQDLRDLLICSIDP 556
Query: 523 STATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPML 582
D+DDAL L +G VGVHIADVS+FV P A+D EA +R T+VY++ ++I ML
Sbjct: 557 IGCQDIDDALHARALPNGNFEVGVHIADVSHFVKPNNAMDTEASIRGTTVYLVDKRIDML 616
Query: 583 PVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
P+LL ++ SL P V+R AFS+ W++NS D+V ++VI+S SYE AQ ID
Sbjct: 617 PMLLGTDLCSLKPYVERYAFSVIWEMNSNADIVGSRFTKSVIKSREAFSYEQAQLRID-- 674
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFL 701
D + L SI++L E+SK LK KR GAL L + + V +
Sbjct: 675 -DASQQDEL----------------TNSIRTLLELSKKLKQKRLDAGALSLSSPEIKVHM 717
Query: 702 FDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLRE 761
E P D L EEFMLLAN + A I AFP +A+LRRH AP E
Sbjct: 718 ESETSDPIDVKTKEHLPTMSLVEEFMLLANTSVAAKIYEAFPQTAILRRHAAPPKTNFDE 777
Query: 762 F-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSG 819
K GL L SS SL+ + + F+ LI ATR M A YFCSG
Sbjct: 778 LANQLRVKKGLDLSVESSRALADSLDLCVDPKEP---FFNTLIRIMATRCMMSAEYFCSG 834
Query: 820 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
+ ++ HY LA +YTHFTSP+RRY DLV HR L AA+E E ++
Sbjct: 835 T-QSYPEFRHYGLASEIYTHFTSPIRRYADLVAHRQLAAAIEYEAVH 880
Score = 43.1 bits (100), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 40/75 (53%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
++ H+++ +N ++ G + ++ V+ +N LE ++ +LI G NRAV+G
Sbjct: 279 LYPEHYTLSKMNTGVKNGLLHQGIFNVSPYNYLEGSIRVPAFPKALLILGRENINRAVDG 338
Query: 219 DFVLIKVDRLSLWAK 233
D V+++V W +
Sbjct: 339 DLVVVEVLPKDQWKQ 353
>gi|294659569|ref|XP_461958.2| DEHA2G09482p [Debaryomyces hansenii CBS767]
gi|199434064|emb|CAG90426.2| DEHA2G09482p [Debaryomyces hansenii CBS767]
Length = 1012
Score = 262 bits (670), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 176/492 (35%), Positives = 253/492 (51%), Gaps = 43/492 (8%)
Query: 413 MVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQI 472
V+L+ + I+ R + + +V A +D W S +PQ H + G E +
Sbjct: 440 FVILMDKVLPKIRIRTRKSKELLGQRIVIA-VDSWPSTSKYPQGHFVRSLGEIESAEAET 498
Query: 473 NAILYENAICCSGFSPESLSCLP--CVPWEVPQ------EELLSRKDLRNFCIFTIDPST 524
A+L E+ + FS L CLP W VPQ E+L RKDLR+ + +IDP
Sbjct: 499 EALLLEHDVEYRPFSKNVLDCLPEEGTNWTVPQNLDNGDEQLAKRKDLRDKLVCSIDPPG 558
Query: 525 ATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPV 584
D+DDAL ++L +G VGVHIADV++FV P TALD E R TSVY++ ++I MLP+
Sbjct: 559 CVDIDDALHAQKLPNGNYEVGVHIADVTHFVRPNTALDNEGAARGTSVYLVDKRIDMLPM 618
Query: 585 LLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFD 644
LL + SL P V+R AFS+ W+L+ ++V+ +++I+S SYE AQ ID K
Sbjct: 619 LLGTNLCSLRPFVERYAFSVIWELDEDANIVNVNYMKSIIKSREAFSYEQAQLRIDDKSQ 678
Query: 645 VESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFLFD 703
+ ++ +S++ L +SK LK KR GAL L + + V +
Sbjct: 679 TD-------------------ELTKSMRILLNLSKKLKQKRLDAGALNLASPEVKVHMDS 719
Query: 704 EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH---PAPNMRKLR 760
E P + + + N L EEFML AN + A I A+P +A+LRRH PA N L
Sbjct: 720 ETSDPGEVEIKKLLETNSLVEEFMLFANISVARKIFDAYPQTAMLRRHAPPPATNFETLN 779
Query: 761 EFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSG 819
E K G+ + SS SL++ + KD Y F+ L+ +TR M A YF S
Sbjct: 780 EMLRI-RKTGMSVSLESSKSLADSLDRCNDP-KDPY--FNTLLRILSTRCMMAAEYFPSS 835
Query: 820 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR-----RMLP 874
+ ++ HY LA +YTHFTSP+RRY D+V HR L A+ E L HR ++
Sbjct: 836 SY-GYPEFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYENLDLSHRDKNKMELIV 894
Query: 875 KNNHREGVRGRF 886
KN +R +F
Sbjct: 895 KNINRRHRNAQF 906
Score = 41.2 bits (95), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 160 FAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEGD 219
F ++S + ++ G ++ + ++ +N LE ++ + +LI G NRA GD
Sbjct: 267 FPEYYSTSRIMGGVKNGTLYQGMLNISTYNFLEGTVQVPAFKKPLLILGTKQLNRAFNGD 326
Query: 220 FVLIKVDRLSLWAKMKGFSNNSSIVEDSNL 249
V+++ L K K +++I+E+SN+
Sbjct: 327 SVIVE-----LLPKDKWREPSTTIIEESNI 351
>gi|336464517|gb|EGO52757.1| mitotic control protein dis3 [Neurospora tetrasperma FGSC 2508]
Length = 984
Score = 262 bits (670), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 187/527 (35%), Positives = 260/527 (49%), Gaps = 59/527 (11%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PT +VV +I+R+ R+ VG ++ + + RK ++ + + P
Sbjct: 375 PTAKVVGVIKRNWRQ--YVGHIDQSSVSSSAAQGRK-------------QDSVFVIPMDK 419
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
K PK+ + + + + + KR + ID W+ S P H + G
Sbjct: 420 KIPKIRLRTRQVAELLGKR------------ILVTIDAWDRTSRHPTGHFVRSLGELETK 467
Query: 469 EPQINAILYENAICCSGFSPESLSCLP--CVPWEVPQEE----LLSRKDLRNFCIFTIDP 522
+ A+L E + F L CLP W+VP R+DLR+ I +IDP
Sbjct: 468 AAETEALLLEYDVQYRPFPKTVLDCLPKEGHDWKVPTSMDDPGWRDRQDLRDLLICSIDP 527
Query: 523 STATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPML 582
D+DDAL L +G VGVHIADVS+FV P A+D EA +R T+VY++ ++I ML
Sbjct: 528 IGCQDIDDALHARALPNGNFEVGVHIADVSHFVKPNNAMDTEASIRGTTVYLVDKRIDML 587
Query: 583 PVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
P+LL ++ SL P V+R AFS+ W++NS D+V ++VI+S SYE AQ ID
Sbjct: 588 PMLLGTDLCSLKPYVERYAFSVIWEMNSNADIVGSRFTKSVIKSREAFSYEQAQLRID-- 645
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFL 701
D + L SI++L E+SK LK KR GAL L + + V +
Sbjct: 646 -DASQQDEL----------------TNSIRTLLELSKKLKQKRLDAGALSLSSPEIKVHM 688
Query: 702 FDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLRE 761
E P D L EEFMLLAN + A I AFP +A+LRRH AP E
Sbjct: 689 ESETSDPIDVKTKEHLPTMSLVEEFMLLANTSVAAKIYEAFPQTAILRRHAAPPKTNFDE 748
Query: 762 F-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSG 819
K GL L SS SL+ + K+ + F+ LI ATR M A YFCSG
Sbjct: 749 LANQLRVKKGLDLSVESSRALADSLDLCVDP-KEPF--FNTLIRIMATRCMMSAEYFCSG 805
Query: 820 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
+ ++ HY LA +YTHFTSP+RRY DLV HR L AA+E E ++
Sbjct: 806 T-QSYPEFRHYGLASEIYTHFTSPIRRYADLVAHRQLAAAIEYEAVH 851
Score = 43.9 bits (102), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 38/67 (56%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
++ H+++ +N ++ G + ++ V+ +N LE ++ +LI G NRAV+G
Sbjct: 250 LYPEHYTLSKINTGVKNGLLHQGIFNVSPYNYLEGSIRVPAFPKALLILGRENINRAVDG 309
Query: 219 DFVLIKV 225
D V+++V
Sbjct: 310 DLVVVEV 316
>gi|242768929|ref|XP_002341666.1| exosome complex exonuclease exoribonuclease (Rrp44), putative
[Talaromyces stipitatus ATCC 10500]
gi|218724862|gb|EED24279.1| exosome complex exonuclease exoribonuclease (Rrp44), putative
[Talaromyces stipitatus ATCC 10500]
Length = 1026
Score = 262 bits (669), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 186/559 (33%), Positives = 280/559 (50%), Gaps = 68/559 (12%)
Query: 316 SDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQW 375
S+ E + S ++ + R + ++ +PT RVV I++R+ R+ VG ++ +
Sbjct: 342 SEEAEVIVSEREKKALQEEVRKAHGQNAEGKAQPTARVVGIVKRNWRQ--YVGHVDPSST 399
Query: 376 FNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATI 435
+ R+ ++ + + P + PK+ + + + + +R
Sbjct: 400 LSQGNSGRR-------------QQSVFVLPMDKRIPKIRIRTRQAAELLGQR-------- 438
Query: 436 EMELVAARIDEWNEESPFPQAHVLHVFG----RGGEVEPQINAILYENAICCSGFSPESL 491
+ +D W+ +S +P H + G +G E E A+L E + F L
Sbjct: 439 ----ILVTVDSWDRDSRYPTGHFVRSLGELETKGAETE----ALLLEYDVQYRPFPKVVL 490
Query: 492 SCLPC------VPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVG 545
CLP VP + R+DLR+ + +IDP D+DDAL L +G VG
Sbjct: 491 DCLPPEGHNWRVPTNMDHPGWHKRRDLRDLLVCSIDPPGCQDIDDALHARLLPNGNYEVG 550
Query: 546 VHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIF 605
VHIADVS FV P A+D+EA +R T+VY++ ++I MLP+LL ++ SL P V+R AFS
Sbjct: 551 VHIADVSNFVKPNNAMDLEASLRGTTVYLVDKRIDMLPMLLGTDLCSLKPYVERFAFSTI 610
Query: 606 WDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWS 665
W++ G+VV ++VIRS SYE AQ ID ++S T
Sbjct: 611 WEITPNGEVVSTDFTKSVIRSREAFSYEQAQLRID-----DASQT--------------D 651
Query: 666 DVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFLFDEYGTPYDSVLS-GREDLNFLF 723
++ +S+++L SKIL+ KR GAL L + + + E P V + N L
Sbjct: 652 ELTQSMRTLLHFSKILRQKRMDAGALNLASPEIRIETESELNDPLTDVKTKAHLATNSLV 711
Query: 724 EEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA-FCSKHGLQLDTSSSGQFH 782
EEFMLLAN T A I AFP +ALLRRH +P + + K GL LD SSSG
Sbjct: 712 EEFMLLANITVASKIYSAFPQTALLRRHASPPPQNFEQLATQLQKKRGLNLDVSSSGALA 771
Query: 783 QSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFT 841
SL++ + K+ + F+ L+ ATR M A YF +G + ++ HY LA P+YTHFT
Sbjct: 772 ASLDKCVDP-KNPF--FNTLVRILATRCMTSAEYFTAGAHA-EVEFRHYGLASPIYTHFT 827
Query: 842 SPLRRYPDLVVHRTLNAAL 860
SP+RRY DL+VHR L AA+
Sbjct: 828 SPIRRYADLIVHRQLAAAI 846
>gi|390343121|ref|XP_001200561.2| PREDICTED: DIS3-like exonuclease 1-like [Strongylocentrotus
purpuratus]
Length = 1047
Score = 262 bits (669), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 176/518 (33%), Positives = 272/518 (52%), Gaps = 44/518 (8%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
P GRVV I+ER+ RD + F ++ + G+ + +K I + P
Sbjct: 325 PCGRVVGILERN-WRDYVATFPEKDE---VQTGASRGSK-------------ILVIPWDY 367
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK+ V + + DA + +V R+D W +S +P H + G G++
Sbjct: 368 RIPKIRVSTR-----------QADALNDQRIVV-RLDNWPADSQYPNGHYVRSLGPIGQL 415
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLRN-FCIFTIDPS 523
E ++ A L EN++ FS + +P PW + EE+ RKDLRN IF+IDP
Sbjct: 416 ETEVAATLIENSLPVGPFSEGQIKEMPVNTWDNPWLMTDEEIGKRKDLRNSHLIFSIDPK 475
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
D+DD LS+ L +G +GVHIADVSYFV G+ D+EA++RST+VY+ R+ MLP
Sbjct: 476 GCEDVDDTLSVRELGNGNIELGVHIADVSYFVKEGSLTDLEARLRSTTVYLADRRYDMLP 535
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR---WIGRTVIRSCCKLSYEHAQDIID 640
+LS ++ SL GVDR A S+ W+L V + W GRT+IRS K+ YE AQ + D
Sbjct: 536 EILSADLCSLIGGVDRYAVSVLWELKPFTFEVIKDKVWYGRTIIRSAYKMFYEAAQMLHD 595
Query: 641 GKFDVESSNTLGE--GWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKP 698
GK S++ + E + + E + ++ L +++ LK +R GA++LE ++
Sbjct: 596 GK--TLSADDIPELRDVDDMTKELELQRLKWAVDQLMMIARRLKAQREVGGAVQLEGTEV 653
Query: 699 VFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRK 758
+E + V +++ E M+ AN A+ IA+++P +ALLR HP P +
Sbjct: 654 KVELNEEQEIENLVPKQTMEIHETIAECMIYANHWVAKKIAQSYPQAALLRHHPLPRQEQ 713
Query: 759 LREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCS 818
++ G +DTS++ + +SL+ + + D V IL + AT+ M A YF +
Sbjct: 714 FQDLITSARSKGFHVDTSTNKKLAESLDGCID--RRDPVFNKILRSLATKAMSNALYFST 771
Query: 819 GDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTL 856
G D + HY LA YTHFTSP+RRY D++VHR L
Sbjct: 772 GSLSVD-QFFHYGLAMDRYTHFTSPIRRYADIIVHRLL 808
Score = 40.4 bits (93), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 10/88 (11%)
Query: 158 KIFAPHWSMEAVNEALEKGDAFKALYRVNAHN-RLEAYCKIEG---------VQTDVLIT 207
K + H + + + ++ G + RVN H+ + EAY + +G ++ D+LI+
Sbjct: 219 KEYRDHLTSDDLGSGIKTGRYMDGMLRVNKHHAQEEAYLQRKGSGLGSKDTELECDILIS 278
Query: 208 GIAAQNRAVEGDFVLIKVDRLSLWAKMK 235
G +NRAV GD V++++ + W K
Sbjct: 279 GTKNRNRAVHGDIVVVELLPKAQWTGKK 306
>gi|71019237|ref|XP_759849.1| hypothetical protein UM03702.1 [Ustilago maydis 521]
gi|46099647|gb|EAK84880.1| hypothetical protein UM03702.1 [Ustilago maydis 521]
Length = 1012
Score = 262 bits (669), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 187/538 (34%), Positives = 270/538 (50%), Gaps = 65/538 (12%)
Query: 342 SSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYI 401
SS +PTG+VV I+ R+ R V ++VN N S+LS + +
Sbjct: 385 SSRGEPQPTGKVVGIVRRNWR--SYVAHVDVNSV-------------NSSALSSLGAQTV 429
Query: 402 QLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHV 461
TP K P++ + + D + +++ L+A +D W S +P H +
Sbjct: 430 FATPVDRKLPRIRIRTRQAKDLMGQKI----------LIA--LDAWRPTSRYPDGHFVRA 477
Query: 462 FGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEELL-----SRKDLRN 514
G+ E + ++L E+ + FS L CLP W VP +++ R D+R+
Sbjct: 478 LGQAESKEAEQESLLLEHDVPYRPFSKAILDCLPPEGDSWVVPPKDMTHHAWRDRVDMRD 537
Query: 515 FCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYM 574
I +IDP D+DDAL ++L +G GVHIADVSYFV P +D EA R T+VY+
Sbjct: 538 EIICSIDPPGCQDIDDALHAKQLPNGNIEAGVHIADVSYFVRPDNPMDAEAASRGTTVYL 597
Query: 575 LQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEH 634
+ ++I MLP LL + SL P V+RLAFS W++ ++V+ ++VI S +YE
Sbjct: 598 VDKRIDMLPHLLGTNLCSLRPYVERLAFSAVWEMTPDAEIVNVRFHKSVIASKAAFTYEE 657
Query: 635 AQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLE 694
AQ + D S N + +SI+ L ++K LK KR GAL L
Sbjct: 658 AQ----LRKDDASKN---------------DAITKSIRLLNSLAKKLKQKRMDAGALNLA 698
Query: 695 NSKPVFLFD--EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH- 751
+ + D E P D + N L EEFMLLAN + AE I + FP +A+LRRH
Sbjct: 699 SPEVRIHLDSSECAAPIDVEQKEMRETNSLVEEFMLLANVSVAERIYQVFPMTAVLRRHL 758
Query: 752 --PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATR 808
P N L++ + ++LD SSSG SL++ + KD F+ L+ ATR
Sbjct: 759 PPPRTNFETLQDI--LLKRRNMELDVSSSGALAASLDKCVDP-KDP--AFNTLVRIMATR 813
Query: 809 PMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
M A YFCSG DT + HY LA +YTHFTSP+RRY D++ HR L AA+ E L+
Sbjct: 814 CMLSAEYFCSGSVARDT-FSHYGLAAGMYTHFTSPIRRYADVLAHRQLAAAINYEPLH 870
Score = 42.7 bits (99), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 35/72 (48%)
Query: 154 EARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQN 213
E R ++ H V ++ G + + N +N LEA + + +L+ G + N
Sbjct: 256 EKRAVLYPEHLPQNQVTAGIKSGQLLQGFFNANPYNYLEATVRSGQLTRPILLVGRESMN 315
Query: 214 RAVEGDFVLIKV 225
RAV+GD V +++
Sbjct: 316 RAVDGDIVAVQM 327
>gi|399030175|ref|ZP_10730681.1| ribonuclease R [Flavobacterium sp. CF136]
gi|398071681|gb|EJL62928.1| ribonuclease R [Flavobacterium sp. CF136]
Length = 726
Score = 262 bits (669), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 178/521 (34%), Positives = 262/521 (50%), Gaps = 56/521 (10%)
Query: 347 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 406
KRP G V+ +IER+ + VG +++ F + ++
Sbjct: 132 KRPEGEVIEVIERN--KTDFVGVIDIQANFAF------------------------VSTA 165
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 466
+PK + + KD E GD +V I++W + + P V+ V G+ G
Sbjct: 166 NPKMYTDIFIPKDKIG----EAENGD------VVLVTIEDWPKRADSPFGSVIRVLGKPG 215
Query: 467 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 526
E +I+AIL E + F E + + + E+ R+D+R+ FTIDP A
Sbjct: 216 EHNTEIHAILAEYGLPAD-FPVEVEVYAQKIDTSIQESEIAKRRDMRDTLTFTIDPKDAK 274
Query: 527 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 586
D DDALS ++L +G +G+HIADVSY++ GT LD EA R+TSVY++ R +PMLP +L
Sbjct: 275 DFDDALSFKKLENGNYEIGIHIADVSYYLEEGTILDDEAYQRATSVYLVDRVVPMLPEVL 334
Query: 587 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 646
S SL P ++ FS ++++ V+++W GRTVI S + +YE AQ II+ K
Sbjct: 335 SNFACSLRPNEEKYTFSAVFEVSPTSQVINQWFGRTVIYSDQRFAYEEAQYIIETK---- 390
Query: 647 SSNTLGEGWPQLYGQFEWSD-VVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEY 705
NT+ + SD +V + L E++KIL+ KR +GA+ + + F D
Sbjct: 391 -DNTIPIDISITGESYVVSDEIVDATLKLDELAKILRKKRMANGAISFDKVEVKFNLDAE 449
Query: 706 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAF 765
G P +D N L EEFMLLAN+ AE I + + + R H PN KL A
Sbjct: 450 GEPEGVYFKISKDANHLIEEFMLLANRKVAEYIGKQ-KKTFVYRIHDEPNEDKLIAMAAV 508
Query: 766 CSKHGLQLDTSSSGQFHQSLEQAREKL--KDDYVLFDILINYATRPMQLASYFCSGDFKD 823
+K G ++D + G +SL E++ K + L D L A R M A Y S D
Sbjct: 509 IAKFGYKIDFRNKGDISKSLNALMEEVNGKKEQNLIDTL---AIRSMSKAKY--STD--- 560
Query: 824 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
+ GHY LAF Y+HFTSP+RRYPD++VHR L L+ K
Sbjct: 561 --NIGHYGLAFDYYSHFTSPIRRYPDVMVHRLLQYYLDGGK 599
>gi|387790426|ref|YP_006255491.1| ribonuclease R [Solitalea canadensis DSM 3403]
gi|379653259|gb|AFD06315.1| ribonuclease R [Solitalea canadensis DSM 3403]
Length = 709
Score = 262 bits (669), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 158/447 (35%), Positives = 237/447 (53%), Gaps = 52/447 (11%)
Query: 420 LPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYEN 479
+P K +++GD + ARI +W + + P ++ V GR GE ++NAIL +
Sbjct: 172 IPQHALKNVKDGDKAV------ARITDWPQGAKNPIGEIVEVLGRPGENNTEMNAILADY 225
Query: 480 AICC---SGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIER 536
+ E+ S L + QEE+ R+D RN FTIDP A D DDA+S +
Sbjct: 226 GFPIKFPAKVEDEANSLLDVIT----QEEIAKRRDFRNITTFTIDPIDAKDFDDAISFRK 281
Query: 537 LSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPG 596
L G +GVHIADVS+++LP T LD EA R TSVY++ R IPMLP LS V SL P
Sbjct: 282 LDTGNYEIGVHIADVSHYILPDTILDKEALERGTSVYLVDRVIPMLPERLSNGVCSLRPN 341
Query: 597 VDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWP 656
++L FS ++++ +++ W GRTVI S + +YE AQ++++GK SS
Sbjct: 342 EEKLTFSAVFEIDEQANILSEWFGRTVINSDRRFTYEEAQEVLEGK----SS-------- 389
Query: 657 QLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGR 716
E++D + L +++ +L+D+R+ GA+ E ++ F DE G P + R
Sbjct: 390 ------EYAD---ELLMLNKIAYVLRDQRYKTGAINFETTEVKFRLDETGKPIGVYVKER 440
Query: 717 EDLNFLFEEFMLLANKTAAEVIARAFPD----SALLRRHPAPNMRKLREFEAFCSKHGLQ 772
+D + L E+FMLLAN+ AE +A+ P + + R H AP+ L +F F ++ G +
Sbjct: 441 KDAHKLIEDFMLLANRKVAEFVAKMGPKKRSYTFVYRVHDAPDETMLTKFSEFAARFGYK 500
Query: 773 LDTSSSGQFHQSLEQAREKLKDDYV---LFDILINYATRPMQLASYFCSGDFKDDTDWGH 829
++ S H+ + ++ L DD ++L A R M A Y H
Sbjct: 501 INMKS----HKEISKSLNFLMDDVTGKKEQNVLTQLAIRAMAKAIYTTKKS-------SH 549
Query: 830 YALAFPVYTHFTSPLRRYPDLVVHRTL 856
Y LAF YTHFTSP+RRYPD++ HR L
Sbjct: 550 YGLAFDYYTHFTSPIRRYPDVLSHRLL 576
>gi|320580721|gb|EFW94943.1| exosome complex exonuclease RRP44 [Ogataea parapolymorpha DL-1]
Length = 974
Score = 261 bits (668), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 187/535 (34%), Positives = 276/535 (51%), Gaps = 65/535 (12%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PT RVV I++RS R VG L N + KD Q+
Sbjct: 365 PTARVVGIVKRSWRL--YVGQLAPN-------SAAKD----------------QVGGNAA 399
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
K ++++ + LP ++ R + +V A +D W+ S +P H + V G +
Sbjct: 400 KSCFVILMDRSLP-KVRIRTRRARELLGKRIVVA-VDSWSPTSKYPDGHFVRVLGDIEDK 457
Query: 469 EPQINAILYENAICCSGFSPESLSCLP--CVPWEVPQE------ELLSRKDLRNFCIFTI 520
+ + A+L E+ + FS L CLP W+VP++ +L R+DLR + +I
Sbjct: 458 DAEQEALLLEHDVEYRPFSKNVLDCLPKEGHDWKVPEKLDNGDPQLAQRRDLREKLVCSI 517
Query: 521 DPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIP 580
DP D+DDAL +RL +G VGVHIADV++FV PGTALD E R+TSVY++ ++I
Sbjct: 518 DPPGCVDIDDALHAQRLPNGNYEVGVHIADVTHFVKPGTALDQEGASRATSVYLVDKRID 577
Query: 581 MLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIID 640
MLP+LL ++ SL P VDR AFS+ W+++ ++V +++IRS +YE AQ +D
Sbjct: 578 MLPMLLGTDLCSLKPYVDRFAFSVLWEMDEDANIVRVDYFKSIIRSKEAFAYEQAQLRMD 637
Query: 641 GKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PV 699
+ D+ + ++ L ++SK LK KR GAL L + + V
Sbjct: 638 DP-------------------SQQDDLTKGMRILLQLSKKLKQKRLDAGALNLASPEVKV 678
Query: 700 FLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH---PAPNM 756
+ E P + + + N L EEFMLLAN + A+ I FP A+LRRH PA N
Sbjct: 679 HMDSETSDPGEVEVKKLVEANSLVEEFMLLANISVAKKIYDEFPQVAMLRRHASPPATNF 738
Query: 757 RKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASY 815
L + + G+ + SS SL++ E +D Y F+ L+ ATR M A Y
Sbjct: 739 EVLNDM--LRVRKGMSISLESSKALADSLDRC-EDPQDPY--FNTLLRIMATRCMMAAEY 793
Query: 816 FCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR 870
F +G++ + D+ HY LA +YTHFTSP+RRY D+VVHR L AA+ E L+ HR
Sbjct: 794 FSAGNYGYE-DFRHYGLATEIYTHFTSPIRRYCDVVVHRQLAAAIGYEPLHPLHR 847
>gi|361127237|gb|EHK99212.1| putative Exosome complex exonuclease dis3 [Glarea lozoyensis 74030]
Length = 1241
Score = 261 bits (668), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 211/717 (29%), Positives = 324/717 (45%), Gaps = 131/717 (18%)
Query: 163 HWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEGDFVL 222
++S+ + ++ G + ++ V+ +N LE K+ +++ G NRAV+GD
Sbjct: 508 YYSVSKMGTGVKNGTLHQGIFNVSPYNYLEGSIKVPAFDKSLIVLGRENINRAVQGD--- 564
Query: 223 IKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCTLLSEK 282
+V LP E ++ + ++ E+
Sbjct: 565 --------------------VVVVEVLPKE-----------------QWKAPSTKIIEEE 587
Query: 283 GIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMIS 342
++ D+++ +E + E+E + D +KV S +
Sbjct: 588 NMNKDENADAEEGESVVTEKE--------RRALQDEVKKVHSK----------------T 623
Query: 343 SYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQ 402
S +PT RVV +I+R+ R+ VG ++ + K AK++R ++ +
Sbjct: 624 SEGRPQPTARVVGVIKRNWRQ--YVGHVD-------ESSVSKSAKESRK------QQTVF 668
Query: 403 LTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVF 462
L P + PK+ V + + + KR V ID W+ +S P H +
Sbjct: 669 LIPMDKRIPKIRVRTRQAGEIVGKR------------VLVTIDSWDRDSRHPVGHFVRSL 716
Query: 463 G----RGGEVEPQINAILYENAICCSGFSPESLSCLPC------VPWEVPQEELLSRKDL 512
G +G E E A+L E + F L CLP VP R+DL
Sbjct: 717 GDLETKGAETE----ALLLEYDVQYRPFPKAVLDCLPAEGHDWIVPPSTDDPGWKDRRDL 772
Query: 513 RNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSV 572
R+ I +IDP D+DDAL L +G VGVHIADVS+FV P A+D EA +R T+V
Sbjct: 773 RHLEICSIDPIGCQDIDDALHARPLPNGNYEVGVHIADVSHFVKPNNAMDAEASIRGTTV 832
Query: 573 YMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSY 632
Y++ ++I MLP+LL ++ SL P ++R AFS W++ ++V ++VI+S SY
Sbjct: 833 YLVDKRIDMLPMLLGTDLCSLKPYIERYAFSAIWEMTPDAEIVKSEFTKSVIKSREAFSY 892
Query: 633 EHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALR 692
E AQ +D K + D+ +I++L +SK K KR GAL
Sbjct: 893 EQAQIRVDDK-------------------SQQDDLTTAIRTLLMLSKKFKQKRMDAGALS 933
Query: 693 LENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH 751
L + + V + E P D D L EEFMLLAN + A I AFP +A+LRRH
Sbjct: 934 LSSPEVRVEMESETSDPIDIKTKKHLDTMSLVEEFMLLANTSVAAKIYEAFPQTAMLRRH 993
Query: 752 PAPNMRKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRP 809
AP E +K L L ++S + SL+ + + F+ L+ ATR
Sbjct: 994 GAPPKTNFEELANQLKTKRNLDLRMATSKELADSLDTCVDPKEP---FFNTLVRIMATRC 1050
Query: 810 MQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
M A YFCSG + ++ HY LA +YTHFTSP+RRY DLV HR L AA++ E L+
Sbjct: 1051 MMSAEYFCSGT-QAYPEFRHYGLASEIYTHFTSPIRRYADLVAHRQLAAAIDYEPLH 1106
>gi|424843137|ref|ZP_18267762.1| ribonuclease R [Saprospira grandis DSM 2844]
gi|395321335|gb|EJF54256.1| ribonuclease R [Saprospira grandis DSM 2844]
Length = 986
Score = 261 bits (668), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 179/528 (33%), Positives = 263/528 (49%), Gaps = 81/528 (15%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 407
+P GRVV I++R+ R+ +G L V++ F + +PD +
Sbjct: 165 KPEGRVVKILKRN--RETFIGTLVVSKRFCF---------------VIPDENTV------ 201
Query: 408 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNE--ESPFPQAHVLHVFGRG 465
M ++V + L EG + + V I EW + + P+ V V G+
Sbjct: 202 ----PMDIIVD------RNSLMEGQSD---DKVVVHITEWPKPNSNDNPKGVVTAVLGKA 248
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
G + ++ +IL + F E ++ +P E+P+ E+ R DLR FTIDP+TA
Sbjct: 249 GGNDIEMKSILIKQGFELD-FPEEVMAESEAIPLEIPEAEIQKRLDLRQIPTFTIDPATA 307
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
D DDALS+E L +G R+G+HIADV+Y+V G+ LD EA R+TSVY++ R +PMLP
Sbjct: 308 KDFDDALSVEMLDNGNYRIGIHIADVTYYVAKGSPLDKEAAKRTTSVYLVDRVLPMLPEK 367
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS V SL P D+L FS ++LN+ G VV+ W G+TVI S + +YE AQ+I+DG
Sbjct: 368 LSNGVCSLRPHEDKLTFSALFELNAKGHVVEEWFGKTVIHSDQRFAYEEAQEILDG---- 423
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEY 705
EG Y Q ++ L + IL+ RF GA+ E+ + F DE
Sbjct: 424 ------AEG---PYSQ--------ELRILNRYAHILRKARFKKGAISFESPEVRFKLDED 466
Query: 706 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSA-----LLRRHPAPNMRKLR 760
G P D L R+D + L E+FMLLAN+ I + + + R H P+M K+
Sbjct: 467 GKPVDVYLKHRKDAHMLVEDFMLLANRRVGAKIMNIYRNGGKEVPFVYRIHDLPDMEKVN 526
Query: 761 EFEAFCSKHGLQLDTSS----SGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYF 816
F F ++ G +L +G F++ L+ A K + +L R M A+Y
Sbjct: 527 GFGKFAAQLGYRLKIQDVEEVAGAFNKMLKAAEGKPE-----HAVLHQLGIRTMSKAAYS 581
Query: 817 CSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
+ GHY L F Y+HFTSP+RRY D++VHR L L EK
Sbjct: 582 TQ-------NIGHYGLGFEDYSHFTSPIRRYADVLVHRNLQHFLMHEK 622
>gi|406862703|gb|EKD15752.1| RNB domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 994
Score = 261 bits (668), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 216/720 (30%), Positives = 320/720 (44%), Gaps = 131/720 (18%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
I+ ++S+ + ++KG + ++ V+ +N LE + +L+ G NRAV+G
Sbjct: 257 IYDEYFSVSKMLTGVKKGTLHQGIFNVSPYNYLEGSIHVPAFDKSLLVLGRENINRAVQG 316
Query: 219 DFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCTL 278
D +V LP + ++ + +
Sbjct: 317 D-----------------------VVVVEVLPKD-----------------QWKEPSTKI 336
Query: 279 LSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLS 338
+ E+ I DD++ E N + ERE + + +K S
Sbjct: 337 IEEETIGKDDNADGEGGNGVISERE--------RRALQEEVKKTHSK------------- 375
Query: 339 AMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDR 398
+S +PT +VV +++R+ R+ VG ++ + SRK +
Sbjct: 376 ---TSEGRAQPTAKVVGVVKRNWRQ--YVGHVDESSVSQSIKQSRK-------------Q 417
Query: 399 EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHV 458
+ + L P + PK+ V + + + KR V ID W+ +S +P H
Sbjct: 418 QTVFLIPMDKRIPKIRVRTRQAGEIVGKR------------VLVTIDSWDRDSRYPIGHF 465
Query: 459 LHVFG----RGGEVEPQINAILYENAICCSGFSPESLSCLP------CVPWEVPQEELLS 508
+ G +G E E A+L E + F L CLP VP
Sbjct: 466 VRSLGELETKGAETE----ALLLEYDVQYRPFPKTVLDCLPKEGHDWIVPPSTDDPGWKD 521
Query: 509 RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVR 568
R+DLR I +IDP D+DDAL L +G VGVHIADVS+FV P A+D EA +R
Sbjct: 522 RRDLRGLQICSIDPIGCQDIDDALHARPLPNGNFEVGVHIADVSHFVKPNNAMDAEASIR 581
Query: 569 STSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCC 628
T+VY++ ++I MLP+LL ++ SL P V+R AFS W++ ++V ++VI+S
Sbjct: 582 GTTVYLVDKRIDMLPMLLGTDLCSLKPYVERYAFSAIWEITPDAEIVKSDFTKSVIKSRE 641
Query: 629 KLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTD 688
SYE AQ ID + + T +I++L +SK K KR
Sbjct: 642 AFSYEEAQLRIDNPANNDELTT-------------------NIRTLLMLSKKFKQKRMDA 682
Query: 689 GALRLENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSAL 747
GAL L + + V E P D D L EEFMLLAN + A I AFP +A+
Sbjct: 683 GALSLSSPEVRVETESETSDPIDIKTKKHLDTMSLVEEFMLLANTSVAAKIYSAFPQTAM 742
Query: 748 LRRHPAPNMRKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-Y 805
LRRH AP E K GL+L TSSS + SL+ + + F+ L+
Sbjct: 743 LRRHGAPPKTNFEELGNQLKVKRGLELRTSSSKELADSLDGC---VDPNEPFFNTLVRIM 799
Query: 806 ATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 865
ATR M A YFCSG + ++ HY LA +YTHFTSP+RRY DLV HR L AA++ E L
Sbjct: 800 ATRCMMSAEYFCSGT-QAYPEFTHYGLASEIYTHFTSPIRRYADLVAHRQLAAAIDYEPL 858
>gi|350296608|gb|EGZ77585.1| mitotic control protein dis3 [Neurospora tetrasperma FGSC 2509]
Length = 1009
Score = 261 bits (668), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 186/527 (35%), Positives = 258/527 (48%), Gaps = 59/527 (11%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PT +VV +I+R+ R+ VG ++ + + RK ++ + + P
Sbjct: 400 PTAKVVGVIKRNWRQ--YVGHIDQSSVSSSAAQGRK-------------QDSVFVIPMDK 444
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
K PK+ + + + + + KR + ID W+ S P H + G
Sbjct: 445 KIPKIRLRTRQVAELLGKR------------ILVTIDAWDRTSRHPTGHFVRSLGELETK 492
Query: 469 EPQINAILYENAICCSGFSPESLSCLP--CVPWEVPQEE----LLSRKDLRNFCIFTIDP 522
+ A+L E + F L CLP W+VP R+DLR+ I +IDP
Sbjct: 493 AAETEALLLEYDVQYRPFPKTVLDCLPKEGHDWKVPASMDDPGWRDRQDLRDLLICSIDP 552
Query: 523 STATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPML 582
D+DDAL L +G VGVHIADVS+FV P A+D EA +R T+VY++ ++I ML
Sbjct: 553 IGCQDIDDALHARALPNGNFEVGVHIADVSHFVKPNNAMDTEASIRGTTVYLVDKRIDML 612
Query: 583 PVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
P+LL ++ SL P V+R AFS+ W++NS D+V ++VI+S SYE AQ ID
Sbjct: 613 PMLLGTDLCSLKPYVERYAFSVIWEMNSNADIVGSRFTKSVIKSREAFSYEQAQLRID-- 670
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFL 701
D + L SI++L E+SK LK KR GAL L + + V +
Sbjct: 671 -DASQQDEL----------------TNSIRTLLELSKKLKQKRLDAGALSLSSPEIKVHM 713
Query: 702 FDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLRE 761
E P D L EEFMLLAN + A I AFP +A+LRRH AP E
Sbjct: 714 ESETSDPIDVKTKEHLPTMSLVEEFMLLANTSVAAKIYEAFPQTAILRRHAAPPKTNFDE 773
Query: 762 F-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSG 819
K GL L SS SL+ + + F+ LI ATR M A YFCSG
Sbjct: 774 LANQLRVKKGLDLSVESSRALADSLDLCVDPKEP---FFNTLIRIMATRCMMSAEYFCSG 830
Query: 820 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
+ ++ HY LA +YTHFTSP+RRY DLV HR L AA+E E ++
Sbjct: 831 T-QSYPEFRHYGLASEIYTHFTSPIRRYADLVAHRQLAAAIEYEAVH 876
Score = 43.1 bits (100), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 40/75 (53%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
++ H+++ +N ++ G + ++ V+ +N LE ++ +LI G NRAV+G
Sbjct: 275 LYPEHYTLSKMNTGVKNGLLHQGIFNVSPYNYLEGSIRVPAFPKALLILGRENINRAVDG 334
Query: 219 DFVLIKVDRLSLWAK 233
D V+++V W +
Sbjct: 335 DLVVVEVLPKDQWKQ 349
>gi|403214808|emb|CCK69308.1| hypothetical protein KNAG_0C01950 [Kazachstania naganishii CBS
8797]
Length = 996
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 226/750 (30%), Positives = 339/750 (45%), Gaps = 136/750 (18%)
Query: 160 FAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEGD 219
F ++S + + G ++ +++ +N LE + VLI G NRA GD
Sbjct: 252 FPEYYSTARIMGGIRNGVLYQGNIQISEYNFLEGAVSLPSFSKPVLIVGQMNLNRAFNGD 311
Query: 220 FVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCTLL 279
V++++ S W SS+ DS H D+
Sbjct: 312 QVVVELLPESEWQA------PSSVALDSE--------HFDV------------------- 338
Query: 280 SEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSA 339
+D+ +E EG + + +P SD ++ + +AI+ A
Sbjct: 339 -------NDNPGNEG-------DEGDDVVASKNPIISDKQRRMLAK------DAIQAQKA 378
Query: 340 MISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDRE 399
RPT RVV+I RS W Y G P+
Sbjct: 379 Q-----KVRPTARVVAITRRS--------------WRQYVGQI------------APNSV 407
Query: 400 YIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVL 459
+Q T + ++++ K LP I+ R ++ +V + +D W +P H +
Sbjct: 408 DLQTAGTQNVF--IILMDKCLP-KIRIRTRRAAELLDKRVVIS-VDSWPANYKYPLGHFV 463
Query: 460 HVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP--CVPWEVP----------QEELL 507
G + + A+L E+ + FS + L CLP W+ P + LL
Sbjct: 464 RDLGTIESAQAETEALLLEHDVEYRPFSKKVLECLPEEGHDWKAPVSVDDIEANKADPLL 523
Query: 508 S-RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQ 566
+ RKDLR+ I +IDP D+DDAL ++L +G VGVHIADV++FV PGTALD E
Sbjct: 524 AKRKDLRDKLICSIDPPGCVDIDDALHAKKLPNGHWEVGVHIADVTHFVKPGTALDAEGA 583
Query: 567 VRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRS 626
R TSVY++ ++I MLP+LL ++ SL P VDR AFS+ W+L+ D+++ ++VIRS
Sbjct: 584 SRGTSVYLVDKRIDMLPMLLGTDLCSLKPYVDRFAFSVIWELDENADIINVEFHKSVIRS 643
Query: 627 CCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRF 686
+YE AQ ID D + + L G +++L ++S LK KR
Sbjct: 644 REAFAYEQAQLRID---DPKQQDELTLG----------------MRALLQLSIKLKQKRL 684
Query: 687 TDGALRLENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDS 745
GAL L + + V + E P + + N L EEFMLLAN + A I +FP +
Sbjct: 685 EAGALNLASPEVKVHMDSETSDPGEVEIKKLLATNSLVEEFMLLANISVARKIYDSFPQT 744
Query: 746 ALLRRH---PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDIL 802
A+LRRH PA N L E + + + SS SL++ E KD Y F+ L
Sbjct: 745 AMLRRHAPPPATNFEILNEM--LQRRKNMSISVESSKALADSLDRC-EDPKDPY--FNTL 799
Query: 803 IN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 861
+ +TR M A YF SG + D+ HY LA +YTHFTSP+RRY D+V HR L A++
Sbjct: 800 VRIMSTRCMMAAQYFYSGAYS-YPDFRHYGLAVDIYTHFTSPIRRYCDIVAHRQLAGAID 858
Query: 862 AEKLYWKHR-----RMLPKNNHREGVRGRF 886
E L HR M+ +N +R+ +F
Sbjct: 859 YEPLSLDHRDKHKMDMICRNINRKHRNAQF 888
>gi|444731284|gb|ELW71642.1| DIS3-like exonuclease 2 [Tupaia chinensis]
Length = 615
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 148/397 (37%), Positives = 215/397 (54%), Gaps = 22/397 (5%)
Query: 537 LSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPG 596
L DG VGVHIADVSYFV G+ LD A R+TSVY++Q+ I MLP LL EE+ SLNP
Sbjct: 139 LPDGSFEVGVHIADVSYFVSEGSDLDRVAAKRATSVYLVQKVIHMLPRLLCEELCSLNPM 198
Query: 597 VDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWP 656
D+L FS+ W L G ++ W GRT+I SC KLSY+ AQ + D + S L P
Sbjct: 199 TDKLTFSVIWKLTPEGKILAEWFGRTIIDSCAKLSYKLAQSMTDSTTEKISEEEL----P 254
Query: 657 QLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSG 715
++ + ++ +++ + ++++ L+ +RF DG L L+ K F D + G P + +
Sbjct: 255 PIFPEHSSKEIHQAVLNPHKIANQLRRQRFVDGVLHLDQVKLAFTLDHKTGLPQECHVCE 314
Query: 716 REDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDT 775
D N L EEFMLL+N A I RAFP ALL RHP P + L++ E FC++ GL +D
Sbjct: 315 YRDSNKLVEEFMLLSNMVVAHKIHRAFPTQALLCRHPPPQTKMLKDLEEFCNQMGLPIDF 374
Query: 776 SSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFP 835
SS+G ++SL + K ++L N ++PMQ+A YFCSG ++ + HYAL P
Sbjct: 375 SSAGTLNKSLTETFGDNKYSLAWKEVLTNMCSQPMQMAVYFCSGVLRNQAQFWHYALNVP 434
Query: 836 VYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPK-----------NNHREGVRG 884
+YTHF+SP+ + D++VH L L ++L L K + H + +
Sbjct: 435 LYTHFSSPICHFADVLVHCLLATVLGYQELLDVEPEALQKQAELCNSRHMASQHVQELST 494
Query: 885 RFLTGIFYDKDAAESLEG------REALSVAALKYGV 915
+ + LE +A V L+YGV
Sbjct: 495 SLFFAVLVKESGPLELEAMVMGILNQAFDVLVLRYGV 531
Score = 43.1 bits (100), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%)
Query: 165 SMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEGDFVLIK 224
S E V+E L++G + + R+N EA+ D+ I + A NRA+ GD V++K
Sbjct: 2 SKEEVSEGLKRGAFIQGILRINPKKFHEAFIPSPDGDRDIFINEVVAHNRALSGDLVVVK 61
Query: 225 VDRLSLWAKMK 235
+ W +K
Sbjct: 62 LLPEEQWKVIK 72
>gi|145477527|ref|XP_001424786.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391852|emb|CAK57388.1| unnamed protein product [Paramecium tetraurelia]
Length = 1123
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 177/535 (33%), Positives = 267/535 (49%), Gaps = 64/535 (11%)
Query: 441 AARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWE 500
+A+ +W +P ++ G G ++ + IL N++ + FS L +
Sbjct: 554 SAKYLQWPRNKKYPTVELIKEVGVQGNIDVECEVILTANSVYENDFSEMCKEELKAFTHD 613
Query: 501 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 560
+E ++R DL I +IDP TA DLDDALSI L +GI +GVHIADVS+FV+P +
Sbjct: 614 SIAKERVNRMDLTKEYICSIDPVTARDLDDALSINNLGNGIYEIGVHIADVSHFVIPNSE 673
Query: 561 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW-- 618
+D EA +R+TSVY++ + IPMLP +L EE+ SLN V+RLAFS+F+ + S G+V+ W
Sbjct: 674 VDKEAILRTTSVYLVHKVIPMLPRILCEELCSLNRDVERLAFSVFFKITSEGEVL--WDS 731
Query: 619 --IGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 676
++VIRSC +LSY+ IIDG+ + S GE + F+ + + L
Sbjct: 732 FRAAKSVIRSCAQLSYDIVNQIIDGEIEQFSQ---GEERYNVAEGFDEKILKDKVLLLNN 788
Query: 677 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 736
+++ ++KR +G++ E SK F+ + P R F+ EE+MLLAN+ +
Sbjct: 789 IAQKRREKRL-EGSITFEKSKLRFILNADLFPTGYTEEKRGLAQFMVEEWMLLANQFVGK 847
Query: 737 VIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQ-----LDTSSSGQFHQSLEQAREK 791
+ +A+LR+H +P KL ++ GL+ LD S+S ++ + E
Sbjct: 848 KLIEYDTKTAVLRQHISPRAEKLEYYQNLLEACGLEEMAKNLDVSTSKNLKLTMAKVSEI 907
Query: 792 LKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 851
++ L IL + M+ A YF D + +W HYAL F VYTHFTSP+RRYPD++
Sbjct: 908 ESEEIKL--ILGFRLLKLMEAAQYFVV-DNTPEIEWRHYALDFDVYTHFTSPIRRYPDVL 964
Query: 852 VHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAAL 911
VHR L ALE +++ TG
Sbjct: 965 VHRRLQIALEQQEVDQ--------------------TG---------------------- 982
Query: 912 KYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLFSCLILYLT 966
D L + HCND KL R V D C +L++ +LLK V IL +T
Sbjct: 983 ----ETKDKLKAIMQHCNDCKLNSRRVSDQCDQLFLALLLKANPVEVDGYILSVT 1033
>gi|195573451|ref|XP_002104707.1| GD21090 [Drosophila simulans]
gi|194200634|gb|EDX14210.1| GD21090 [Drosophila simulans]
Length = 957
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 177/549 (32%), Positives = 270/549 (49%), Gaps = 87/549 (15%)
Query: 323 SSSQQNDGMNAIERLSAMISSYPTKR-PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG 381
S + D + ++++ A S P +R PTGR+V I+ R +W Y G
Sbjct: 323 SEERAKDENDMLKQVRAAAS--PAERTPTGRIVGIVRR--------------KWRQYCGI 366
Query: 382 SRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVA 441
+ + D P K P++ + + A ++ + +
Sbjct: 367 LQPSL--------IEDTNRHIFVPADRKIPRIRIETRQA------------AKLQNQRII 406
Query: 442 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEV 501
ID W S +P H + G G+ + IL E+ + FS E LS LP +PW +
Sbjct: 407 VTIDTWPRNSRYPHGHFVRSLGPLGDTATENEVILLEHDVPHCKFSDEVLSFLPKMPWTI 466
Query: 502 PQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTAL 561
E+ R DLR+ I ++DP TD+DDAL L +G VGVHIADVS+F+ PG AL
Sbjct: 467 TDEDYSKRVDLRDLFICSVDPPGCTDIDDALHCRELPNGNLEVGVHIADVSHFIRPGNAL 526
Query: 562 DIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGR 621
D+EA R T+VY++ ++I M+P LLS + SL GV+R AFS W++++ +V+ + +
Sbjct: 527 DMEAAARGTTVYLVGKRIDMVPELLSSNLCSLVGGVERFAFSCVWEVDNEANVLSKRFHK 586
Query: 622 TVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKIL 681
+VI+S ++YE AQ IID D N ++ +S++ L ++KIL
Sbjct: 587 SVIKSKRAMTYEEAQSIID---DATQQN----------------EIAKSLRHLNRLAKIL 627
Query: 682 KDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR 740
K +R +GAL L + + F D E P + + + N + EEFMLLAN T AE IA
Sbjct: 628 KKRRMDNGALVLASPEIRFQVDSETHEPLEVEVKQMRETNSMVEEFMLLANITVAEHIAT 687
Query: 741 AFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFD 800
F +++ Q+D S + SL++ +K D F+
Sbjct: 688 EFSEAS-------------------------QVDIESGLELSHSLDKC---VKADNPYFN 719
Query: 801 ILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAA 859
+I TR M A YF SG + + ++ HY LA P+YTHFTSP+RRY D++VHR L A+
Sbjct: 720 TMIRILTTRCMMQAVYFISGSLQKE-EFFHYGLAAPIYTHFTSPIRRYSDIMVHRLLAAS 778
Query: 860 LEAEKLYWK 868
+ A+ Y K
Sbjct: 779 IGADSTYAK 787
Score = 48.1 bits (113), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%)
Query: 160 FAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEGD 219
+ PH SM+ + E L + + ++ + N LE +E + +LI G A NRAV+GD
Sbjct: 232 YPPHLSMKELLEGLRQNKILQGTFQASRENYLEGSVSVEKFEKGILIQGREALNRAVDGD 291
Query: 220 FVLIKVDRLSLWA 232
V +++ S W+
Sbjct: 292 LVAVELLPESEWS 304
>gi|365960788|ref|YP_004942355.1| ribonuclease R [Flavobacterium columnare ATCC 49512]
gi|365737469|gb|AEW86562.1| ribonuclease R [Flavobacterium columnare ATCC 49512]
Length = 725
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 179/521 (34%), Positives = 259/521 (49%), Gaps = 56/521 (10%)
Query: 347 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 406
KRP V+ +IER R VG ++V + F + +T
Sbjct: 132 KRPEAEVIEVIERE--RMEFVGVIDVQKNFAF------------------------VTTA 165
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 466
+PK + + K+ K +GD +V +I++W +++ P V V GR G
Sbjct: 166 NPKMYTDIFIPKEKIGEAK----DGD------VVLVKIEDWPKKADSPFGSVEKVLGRPG 215
Query: 467 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 526
E + +I+AIL E + F E + + + EE+ R+D+RN FTIDP A
Sbjct: 216 EHDTEIHAILAEYGLPYD-FPVEVEAYAKKLDTTIQPEEIAKRRDMRNVLTFTIDPKDAK 274
Query: 527 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 586
D DDALS + L +G +GVHIADVS++V GT LD EA R+TSVY++ R +PMLP +L
Sbjct: 275 DFDDALSFQVLENGNYEIGVHIADVSHYVQEGTILDDEAFKRATSVYLVDRVVPMLPEVL 334
Query: 587 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 646
S SL P ++ FS +++N+ +VV++W GRTVI S + +YE AQ II+ K
Sbjct: 335 SNFACSLRPHEEKYTFSAVFEINAKAEVVNQWFGRTVIYSDQRFAYEEAQHIIETK---- 390
Query: 647 SSNTLGEGWPQLYGQFEWSD-VVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEY 705
NT+ + D +V + L E++KIL+ R +GA+ + + F DE
Sbjct: 391 -GNTIPAEISLTEEAYIVPDAIVEATLKLDELAKILRRNRMNNGAISFDKVEVKFKLDEN 449
Query: 706 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAF 765
P +D N L EEFMLLAN+ AE I + + + R H P+ KL +
Sbjct: 450 DEPVGVYFKIAKDANHLIEEFMLLANRKVAEFIGKQ-KKTFVYRIHDEPDENKLMNLQGI 508
Query: 766 CSKHGLQLDTSSSGQFHQSLEQAREKL--KDDYVLFDILINYATRPMQLASYFCSGDFKD 823
SK G L+ S +SL E + K + + D L A R M A Y
Sbjct: 509 ISKFGYSLNFKSKDTISKSLNTLLENVAGKKEQNMVDTL---AIRTMSKAKYSTE----- 560
Query: 824 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
+ GHY LAF Y+HFTSP+RRYPD++VHR L L+ K
Sbjct: 561 --NIGHYGLAFDYYSHFTSPIRRYPDVMVHRLLQQYLDGAK 599
>gi|334184269|ref|NP_001189541.1| exosome complex exonuclease DIS3/RRP44 [Arabidopsis thaliana]
gi|330251545|gb|AEC06639.1| exosome complex exonuclease DIS3/RRP44 [Arabidopsis thaliana]
Length = 1012
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 185/560 (33%), Positives = 276/560 (49%), Gaps = 100/560 (17%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVP----DREYIQL 403
RP+GRVV +I R+ W +Y G + +S+P +
Sbjct: 381 RPSGRVVGVIRRN--------------WHSYCG--------SLEPMSLPAGSGGTAHALF 418
Query: 404 TPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG 463
+ PK+ + + L + ++M +V A +D W+ +S +P H + G
Sbjct: 419 VSKDRRIPKIRINTRQLQN-----------LLDMRIVVA-VDSWDRQSRYPSGHYVRPIG 466
Query: 464 RGG------EVEPQIN----------------AILYENAICCSGFSPESLSCLPCVPWEV 501
+ G EV IN +L EN + S FS + L+CLP +PW V
Sbjct: 467 KIGDKETETEVRDHINLFDSILVGVRWARVGKVVLIENDVDYSPFSSQVLACLPPLPWSV 526
Query: 502 PQEELLS--RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGV------------H 547
E++ + R+DLR+ +F++DP D+DDAL L +G +GV +
Sbjct: 527 SSEDVSNPVRQDLRHLLVFSVDPPGCKDIDDALHCTSLPNGNFELGVRILESSDSHKYDY 586
Query: 548 IADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWD 607
IADV+ FV PGT LD EA R TSVY+++R+I MLP L+E++ SL V+RLAFS+ W+
Sbjct: 587 IADVTNFVHPGTPLDDEASKRGTSVYLVERRIDMLPKPLTEDICSLRADVERLAFSVIWE 646
Query: 608 LNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDV 667
++ +++ +++I+S LSY AQ +D +S T
Sbjct: 647 MSPDAEIISTRFTKSIIKSSAALSYIEAQARMDDSRLTDSLTT----------------- 689
Query: 668 VRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEF 726
++++ ++KI++ +R GAL L +++ F D E P + + + N + EEF
Sbjct: 690 --DLRNMNTLAKIMRQRRIDRGALTLASAEVKFDIDPENHDPLNIGMYQILEANQMVEEF 747
Query: 727 MLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLE 786
ML AN + A I + FP +LLRRHP P L + GL LD SSS SL+
Sbjct: 748 MLAANVSVAGQILKLFPSCSLLRRHPTPTREMLEPLLRTAAAIGLTLDVSSSKALADSLD 807
Query: 787 QAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLR 845
+A +D Y F+ LI ATR M A YFCSGD ++ HY LA P+YTHFTSP+R
Sbjct: 808 RAVG--EDPY--FNKLIRILATRCMTQAVYFCSGDLS-PPEYHHYGLAAPLYTHFTSPIR 862
Query: 846 RYPDLVVHRTLNAALEAEKL 865
RY D+ VHR L A+L KL
Sbjct: 863 RYADVFVHRLLAASLGIYKL 882
Score = 46.2 bits (108), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 4/100 (4%)
Query: 143 TNKD----DNPSHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIE 198
TN+D D + R I+ H M + L +G + RVN N EAY E
Sbjct: 240 TNEDITMEDADDSRPSKRKLIYQEHKPMSEITAGLHRGIYHQGKLRVNRFNPYEAYVGSE 299
Query: 199 GVQTDVLITGIAAQNRAVEGDFVLIKVDRLSLWAKMKGFS 238
+ +++I G + NRA +GD V +++ W K S
Sbjct: 300 SIGEEIIIYGRSNMNRAFDGDIVAVELLPRDQWQDEKALS 339
>gi|440639867|gb|ELR09786.1| exosome complex exonuclease DIS3/RRP44 [Geomyces destructans
20631-21]
Length = 994
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 195/584 (33%), Positives = 281/584 (48%), Gaps = 76/584 (13%)
Query: 298 EMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSII 357
++IE E +N + + +D E + + Q+ + + + S+ +PT +VV ++
Sbjct: 335 KIIEEE---ILNKNENADADDGEALVTPQERRALQEEVKKTHSKSTEGRPQPTAKVVGVL 391
Query: 358 ERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLV 417
+R+ R+ VG ++ + + SRK ++ + L P K PK+ V
Sbjct: 392 KRNWRQ--YVGHVDESSVSDSVKQSRK-------------QQTVFLIPMDKKIPKIRVRT 436
Query: 418 KDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG----RGGEVEPQIN 473
+ + + KR + ID W+ ES +P H + G +G E E
Sbjct: 437 RQAGELLGKR------------ILVTIDSWDRESRYPVGHFVRSLGELETKGAETE---- 480
Query: 474 AILYENAICCSGFSPESLSCLP------CVPWEVPQEELLSRKDLRNFCIFTIDPSTATD 527
A+L E I F L CLP VP R+DLR I +IDP D
Sbjct: 481 ALLLEYDIQYRPFPKTVLDCLPKEGSDWIVPSSTEDPGWKGRQDLRGLLICSIDPVGCQD 540
Query: 528 LDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLS 587
+DDAL L +G VGVHIADVS FV P A+D EA +R T+VY++ ++I MLP+LL
Sbjct: 541 IDDALHARPLPNGNYEVGVHIADVSNFVKPNNAMDKEASIRGTTVYLVDKRIDMLPMLLG 600
Query: 588 EEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVES 647
+ SL P V+R AFS W++ D+V ++VI+S SYE AQ ID
Sbjct: 601 TNLCSLMPYVERYAFSAVWEITPDADIVKSSFTKSVIKSREAFSYEQAQIRID------- 653
Query: 648 SNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFLFDEYG 706
+ D+ + +++L +SK LK KR GAL L + + V + E
Sbjct: 654 ------------DASQQDDLTKGMRTLLMLSKKLKQKRMDAGALSLSSPEVKVQMESETS 701
Query: 707 TPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF-EAF 765
P D + D N L EEFMLLAN + A I A+P +ALLRRH AP E
Sbjct: 702 DPIDVQTKQQLDTNSLVEEFMLLANISVATKIHEAYPQTALLRRHAAPPKSNFEELANQL 761
Query: 766 CSKHGLQLDTSSSGQFHQSLE---QAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDF 821
K GL+L SS SL+ +EK F+ L+ ATR M A Y+ +G+F
Sbjct: 762 KVKRGLELKHESSRALADSLDLCVDPKEK------FFNTLVRIMATRCMMSAEYYVAGNF 815
Query: 822 KDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 865
++ HY LA +YTHFTSP+RRY DLV HR L AA++ E+L
Sbjct: 816 A-YPEFRHYGLASEIYTHFTSPIRRYADLVAHRMLAAAIDYEQL 858
>gi|189188860|ref|XP_001930769.1| ribonuclease R [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187972375|gb|EDU39874.1| ribonuclease R [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 989
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 187/531 (35%), Positives = 260/531 (48%), Gaps = 67/531 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 407
+PT RVV II+R+ W Y G SS S ++ + L P
Sbjct: 382 QPTARVVGIIKRN--------------WRQYVGHI-DRDSVRSSSKSSRQQQTVFLVPMD 426
Query: 408 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG---- 463
+ PK+ + + + + +R V A ID W+ +S +P H + G
Sbjct: 427 KRIPKIRIRTRQAGELLGQR------------VLATIDSWDRDSRYPVGHFVRSLGELES 474
Query: 464 RGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEE----LLSRKDLRNFCI 517
+G E E A+L E + F L CLP W+VP R+DLR+ +
Sbjct: 475 KGAETE----ALLLEWDVQYKPFPKTVLDCLPAEGHDWKVPASMDDPGWKGRRDLRDLLV 530
Query: 518 FTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 577
+IDP D+DDAL +L +G +VGVHIADVS+FV P A+D EA R T+VY++ +
Sbjct: 531 CSIDPVGCVDIDDALHAHKLPNGNYQVGVHIADVSHFVKPNNAMDKEASQRGTTVYLVDK 590
Query: 578 KIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQD 637
+I MLP+LL ++ SL P V+R AFS+ W++ D+V ++VIRS SYE AQ
Sbjct: 591 RIDMLPMLLGTDLCSLKPYVERYAFSVLWEVTEDADIVSSHFTKSVIRSREAFSYEQAQI 650
Query: 638 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 697
ID + D+ + +++L +SK LK KR GAL L + +
Sbjct: 651 RID-------------------DNSQQDDLTKGMRTLLMLSKKLKQKRMDAGALNLSSPE 691
Query: 698 -PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNM 756
V E P D D N L EEFMLLAN + A AFP +ALLRRH AP
Sbjct: 692 VKVRTESETSDPVDVETKKHLDTNSLVEEFMLLANISVAAKNYEAFPQTALLRRHAAPPK 751
Query: 757 RKLREFE-AFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLAS 814
E + K G++L T SS SL++ + F+ L+ ATR M A
Sbjct: 752 TNFEELDNQLKVKKGMELKTDSSKALADSLDKC---VDPGNPFFNTLVRIMATRCMMSAE 808
Query: 815 YFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 865
YFC+G + ++ HY LA +YTHFTSP+RRY DL HR L AA+E E+L
Sbjct: 809 YFCAGT-QAYPEFRHYGLASEIYTHFTSPIRRYADLEAHRQLAAAIEYEQL 858
>gi|381186560|ref|ZP_09894130.1| 3'-to-5' exoribonuclease RNase R [Flavobacterium frigoris PS1]
gi|379651404|gb|EIA09969.1| 3'-to-5' exoribonuclease RNase R [Flavobacterium frigoris PS1]
Length = 729
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 176/521 (33%), Positives = 267/521 (51%), Gaps = 57/521 (10%)
Query: 347 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 406
K+P G V+ ++ER+ + VG +++ + F++ ++
Sbjct: 132 KKPEGEVIEVLERN--KTDFVGVIDIQKNFSF------------------------VSTA 165
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 466
+PK + + KD E+GD +V I++W ++ P V+ V G+ G
Sbjct: 166 NPKMYTDIFIPKDKIGE----AEQGD------VVLVHIEDWPSKADSPFGKVIKVLGKPG 215
Query: 467 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 526
E + +I+AIL E + S F E + + + + E+ R+D+R+ FTIDP A
Sbjct: 216 EHDTEIHAILAEYGLP-SEFPIEVETYAQKIDTSITEAEIAKRRDMRDTLTFTIDPKDAK 274
Query: 527 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 586
D DDALS ++L +G +G+HIADVSY++ GT LD EA R+TSVY++ R +PMLP +L
Sbjct: 275 DFDDALSFKKLENGNYEIGIHIADVSYYLEEGTILDDEAYQRATSVYLVDRVVPMLPEVL 334
Query: 587 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 646
S SL P ++ FS ++++ V+ W GRTVI S + +YE AQ II+ K D
Sbjct: 335 SNFACSLRPQEEKYTFSAVFEIDDKCKVISEWFGRTVIYSDQRFAYEEAQYIIETKDD-- 392
Query: 647 SSNTLGEGWPQLYGQFEWS-DVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEY 705
T+ E ++ S ++V + L E++KI + KR DGA+ + + F +
Sbjct: 393 ---TIPEEISITGSSYQVSPEIVSATLKLDELAKIFRRKRMNDGAISFDKVEVKFDLSDE 449
Query: 706 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAF 765
G P +D N L EEFMLLANK AE + + + + R H PN KL +A
Sbjct: 450 GEPEGVYFKVSKDANHLIEEFMLLANKKVAEFVGKQ-KKTFIYRIHDEPNEDKLFAMQAV 508
Query: 766 CSKHGLQLDTSSSGQFHQSLEQAREKL--KDDYVLFDILINYATRPMQLASYFCSGDFKD 823
+K G ++D G Q+L + E + K + L D L A R M A Y S D
Sbjct: 509 IAKFGHKIDF-KQGSISQALNKLMEDVNGKKEQNLIDTL---AIRTMSKAKY--STD--- 559
Query: 824 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
+ GHY LAF Y+HFTSP+RRYPD++VHR L L+ K
Sbjct: 560 --NIGHYGLAFDYYSHFTSPIRRYPDVMVHRLLQFYLDGAK 598
>gi|212542443|ref|XP_002151376.1| exosome complex exonuclease exoribonuclease (Rrp44), putative
[Talaromyces marneffei ATCC 18224]
gi|210066283|gb|EEA20376.1| exosome complex exonuclease exoribonuclease (Rrp44), putative
[Talaromyces marneffei ATCC 18224]
Length = 1025
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 182/527 (34%), Positives = 265/527 (50%), Gaps = 68/527 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 407
+PT R+V I++R N Q+ + S + N S ++ + + P
Sbjct: 373 QPTARIVGIVKR-----------NWRQYVGHIDASSTSLQGN----SGRRQQTVFVLPMD 417
Query: 408 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG---- 463
+ PK+ + + + + +R + +D W+ +S +P H + G
Sbjct: 418 KRIPKIRIRTRQAAELLGQR------------ILVTVDSWDRDSRYPTGHFVRSLGELET 465
Query: 464 RGGEVEPQINAILYENAICCSGFSPESLSCLPC------VPWEVPQEELLSRKDLRNFCI 517
+G E E A+L E + F L CLP VP + R+DLR+ +
Sbjct: 466 KGAETE----ALLLEYDVQYRPFPKVVLDCLPPEGHDWRVPTNMDHPGWHKRRDLRDLLV 521
Query: 518 FTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 577
+IDP D+DDAL L +G VGVHIADVS FV P A+D+EA +R T+VY++ +
Sbjct: 522 CSIDPPGCQDIDDALHARLLPNGNYEVGVHIADVSNFVKPNNAMDLEASLRGTTVYLVDK 581
Query: 578 KIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQD 637
+I MLP+LL ++ SL P V+R AFS W++ G++V ++VI S SYE AQ
Sbjct: 582 RIDMLPMLLGTDLCSLKPYVERFAFSTIWEITPNGEIVSSDFTKSVILSREAFSYEQAQL 641
Query: 638 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 697
ID ++S T D+ +S+++L SKIL+ KR GAL L + +
Sbjct: 642 RID-----DASQT--------------DDLTQSMRTLLHFSKILRQKRMDAGALNLASPE 682
Query: 698 -PVFLFDEYGTPYDSVLS-GREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPN 755
+ E P V + N L EEFMLLAN T A I AFP +ALLRRH +P
Sbjct: 683 IRIETESELNDPLTDVKTKAHLATNSLVEEFMLLANITVASKIYSAFPQTALLRRHASPP 742
Query: 756 MRKLREFEA-FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLA 813
+ + A K GL LD SSSG SL++ + K+ + F+ L+ ATR M A
Sbjct: 743 PQNFEQLAAQLQKKRGLHLDVSSSGALADSLDRCVDP-KNPF--FNTLVRILATRCMTSA 799
Query: 814 SYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
YF +G + ++ HY LA P+YTHFTSP+RRY DL+VHR L AA+
Sbjct: 800 EYFTAGAHA-EAEFRHYGLASPIYTHFTSPIRRYADLIVHRQLAAAI 845
Score = 42.0 bits (97), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 156 RCKIFAP-HWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNR 214
R + F P ++SM + + G + ++ ++ +N LE + + +LI G NR
Sbjct: 244 RTEFFYPEYYSMSKMMTGVRAGTMHQGIFNISPYNYLEGSVNVPAFEKPLLILGRDNSNR 303
Query: 215 AVEGDFVLIKV 225
AV GD V+++V
Sbjct: 304 AVSGDIVVVEV 314
>gi|390369060|ref|XP_793897.3| PREDICTED: DIS3-like exonuclease 1-like, partial
[Strongylocentrotus purpuratus]
Length = 839
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 176/518 (33%), Positives = 272/518 (52%), Gaps = 44/518 (8%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
P GRVV I+ER+ RD + F ++ + G+ + +K I + P
Sbjct: 324 PCGRVVGILERN-WRDYVATFPEKDE---VQTGASRGSK-------------ILVIPWDY 366
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK+ V + + DA + +V R+D W +S +P H + G G++
Sbjct: 367 RIPKIRVSTR-----------QADALNDQRIVV-RLDNWPADSQYPNGHYVRSLGPIGQL 414
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLRN-FCIFTIDPS 523
E ++ A L EN++ FS + +P PW + EE+ RKDLRN IF+IDP
Sbjct: 415 ETEVAATLIENSLPVGPFSEGQIKEMPVNTWDDPWLMTDEEMGKRKDLRNSHLIFSIDPK 474
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
D+DD LS+ L +G +GVHIADVSYFV G+ D+EA++RST+VY+ R+ MLP
Sbjct: 475 GCEDVDDTLSVRELGNGNIELGVHIADVSYFVKEGSLTDLEARLRSTTVYLADRRYDMLP 534
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR---WIGRTVIRSCCKLSYEHAQDIID 640
+LS ++ SL GVDR A S+ W+L V + W GRT+IRS K+ YE AQ + D
Sbjct: 535 EILSADLCSLIGGVDRYAVSVLWELKPFTFEVIKDKVWYGRTIIRSAYKMFYEAAQMLHD 594
Query: 641 GKFDVESSNTLGE--GWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKP 698
GK S++ + E + + E + ++ L +++ LK +R GA++LE ++
Sbjct: 595 GK--TLSADDIPELRDVDDMTKELELQRLKWAVDQLMMIARRLKAQREVGGAVQLEGTEV 652
Query: 699 VFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRK 758
+E + V +++ E M+ AN A+ IA+++P +ALLR HP P +
Sbjct: 653 KVELNEEQEIENLVPKQTMEIHETIAECMIYANHWVAKKIAQSYPQAALLRHHPLPRQEQ 712
Query: 759 LREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCS 818
++ G +DTS++ + +SL+ + + D V IL + AT+ M A YF +
Sbjct: 713 FQDLITSARSKGFLVDTSTNKKLAESLDGCID--RRDPVFNKILRSLATKAMSNALYFST 770
Query: 819 GDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTL 856
G D + HY LA YTHFTSP+RRY D++VHR L
Sbjct: 771 GSLSVD-QFFHYGLAMDRYTHFTSPIRRYADIIVHRLL 807
Score = 40.0 bits (92), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 10/88 (11%)
Query: 158 KIFAPHWSMEAVNEALEKGDAFKALYRVNAHN-RLEAYCKIEG---------VQTDVLIT 207
K + H + + + ++ G + RVN H+ + EAY + +G ++ D+LI+
Sbjct: 218 KEYRDHLTSDDLGSGIKTGRYVDGMLRVNKHHAQEEAYLQRKGSGLGSKDTELECDILIS 277
Query: 208 GIAAQNRAVEGDFVLIKVDRLSLWAKMK 235
G +NRAV GD V++++ + W K
Sbjct: 278 GTKNRNRAVHGDIVVVELLPKAQWTGKK 305
>gi|395802577|ref|ZP_10481829.1| ribonuclease R [Flavobacterium sp. F52]
gi|395435018|gb|EJG00960.1| ribonuclease R [Flavobacterium sp. F52]
Length = 727
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 175/519 (33%), Positives = 262/519 (50%), Gaps = 55/519 (10%)
Query: 347 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 406
KRP G V+ +IER + VG +++ F + ++
Sbjct: 132 KRPEGEVIEVIERD--KTEFVGVIDMQPNFAF------------------------VSTA 165
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 466
+PK + + KD E GD +V +I++W + + P V+ V G+ G
Sbjct: 166 NPKMYTDIFIPKDKIGE----AENGD------VVLVKIEDWPKRADSPFGSVIRVLGKPG 215
Query: 467 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 526
E +I+AIL E + F E + + + E+ R+D+R+ FTIDP A
Sbjct: 216 EHNTEIHAILAEYGLPAD-FPVEVEVFAQKLDTSIQESEIAKRRDMRDTLTFTIDPKDAK 274
Query: 527 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 586
D DDALS ++L +G +G+HIADVSY++ GT LD EA R+TSVY++ R +PMLP +L
Sbjct: 275 DFDDALSFKKLENGNFEIGIHIADVSYYLEEGTILDDEAYQRATSVYLVDRVVPMLPEVL 334
Query: 587 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 646
S SL P ++ FS ++++ V+++W GRTVI S + +YE AQ II+ K
Sbjct: 335 SNFACSLRPNEEKYTFSAIFEVSPTAQVINQWFGRTVIYSDQRFAYEEAQHIIETK---- 390
Query: 647 SSNTLGEGWPQLYGQFEWSD-VVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEY 705
+NT+ + SD +V + L E++KIL+ KR GA+ + + F +E
Sbjct: 391 GNNTIPVDISITGESYVVSDEIVEATLKLDELAKILRKKRMQQGAISFDKVEVKFNLNEE 450
Query: 706 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAF 765
G P +D N L EEFMLLAN+ AE I + + + R H PN KL +
Sbjct: 451 GEPEGVYFKISKDANHLIEEFMLLANRKVAEYIGKQ-KKTFVYRIHDEPNEDKLIAMQTV 509
Query: 766 CSKHGLQLDTSSSGQFHQSLEQAREKL--KDDYVLFDILINYATRPMQLASYFCSGDFKD 823
+K G ++D + G +S+ E++ K + L D L A R M A Y S D
Sbjct: 510 IAKFGYKIDFRTKGDIAKSINALMEEVNGKKEQNLIDTL---AIRSMSKAKY--STD--- 561
Query: 824 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEA 862
+ GHY LAF Y+HFTSP+RRYPD++VHR L L+
Sbjct: 562 --NIGHYGLAFDYYSHFTSPIRRYPDVMVHRLLQYYLDG 598
>gi|379728870|ref|YP_005321066.1| ribonuclease R [Saprospira grandis str. Lewin]
gi|378574481|gb|AFC23482.1| ribonuclease R [Saprospira grandis str. Lewin]
Length = 986
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 177/528 (33%), Positives = 263/528 (49%), Gaps = 81/528 (15%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 407
+P GRV+ I++R+ R+ +G L V++ F + +PD +
Sbjct: 165 KPEGRVIKILKRN--RETFIGTLVVSKRFCF---------------VIPDENTV------ 201
Query: 408 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNE--ESPFPQAHVLHVFGRG 465
M ++V + L EG + + V I EW + + P+ + V G+
Sbjct: 202 ----PMDIIVD------RNSLMEGQSD---DKVVVHITEWPKPNSNDNPKGVITTVLGKA 248
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
G + ++ +IL + F E ++ +P E+P+ E+ R DLR FTIDP+TA
Sbjct: 249 GGNDIEMKSILIKQGFELD-FPEEVMAESEAIPLEIPESEIQKRLDLRQIPTFTIDPATA 307
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
D DDALS+E L +G R+G+HIADV+Y+V G+ LD EA R+TSVY++ R +PMLP
Sbjct: 308 KDFDDALSVEMLDNGNYRIGIHIADVTYYVAKGSPLDKEAAKRTTSVYLVDRVLPMLPEK 367
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS V SL P D+L FS ++LN+ G VV+ W G+TVI S + +YE AQ+I+DG
Sbjct: 368 LSNGVCSLRPHEDKLTFSALFELNAKGHVVEEWFGKTVIHSDQRFAYEEAQEILDG---- 423
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEY 705
EG Y Q ++ L + IL+ RF GA+ E+ + F DE
Sbjct: 424 ------AEG---PYSQ--------ELRILNRYAHILRKARFKKGAISFESPEVRFKLDED 466
Query: 706 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSA-----LLRRHPAPNMRKLR 760
G P D L R+D + L E+FMLLAN+ I + + + R H P+M K+
Sbjct: 467 GKPVDVYLKHRKDAHMLVEDFMLLANRRVGAKIMNIYRNGGKEIPFVYRIHDLPDMEKVN 526
Query: 761 EFEAFCSKHGLQLDTSS----SGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYF 816
F F ++ G +L +G F++ L+ A K + +L R M A+Y
Sbjct: 527 GFGKFAAQLGYRLKIQDVEQVAGAFNKMLKAAEGKPE-----HAVLHQLGIRTMSKAAYS 581
Query: 817 CSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
+ GHY L F Y+HFTSP+RRY D++VHR L L EK
Sbjct: 582 TQ-------NIGHYGLGFEDYSHFTSPIRRYADVLVHRNLQHFLMNEK 622
>gi|389749303|gb|EIM90480.1| RNB-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 1003
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 184/535 (34%), Positives = 260/535 (48%), Gaps = 69/535 (12%)
Query: 347 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNY--KGGSRKDAKKNRSSLSVPDREYIQLT 404
K+PTGRVV +I+R+ W Y S N +SLS ++ + T
Sbjct: 377 KQPTGRVVGVIKRN--------------WRAYVCHIDSTSLTSINSTSLS---QQTVFAT 419
Query: 405 PTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGR 464
P P++ + + P + ++ + ID+W+ S +P+ H + G+
Sbjct: 420 PVSRLLPRIRMRTRQAPSLLNQK------------ILVTIDKWDRTSRYPEGHFVRALGK 467
Query: 465 GGEVEPQINAILYENAICCSGFSPESLSCLPCVP--WEVPQEE-----LLSRKDLRNFCI 517
E + ++L E + F L CLP W VP + R+DLR+ I
Sbjct: 468 VESKEAEQESLLLEFDVPYRPFGRAILDCLPSEGENWVVPPKSEGNAIWRDREDLRDMVI 527
Query: 518 FTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 577
+IDP D+DDAL RL +G GVHIADVS+FVLP +D EA R T+VY++ +
Sbjct: 528 CSIDPPGCQDIDDALHARRLPNGNIEAGVHIADVSHFVLPDNPMDSEAASRGTTVYLVDK 587
Query: 578 KIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQD 637
+I MLP LL + SL P V+RLAFS W++ +V+ ++VI S +YE AQ
Sbjct: 588 RIDMLPALLGTNLCSLRPFVERLAFSCIWEMTEDAKIVNVRFTKSVIASKSAFTYEEAQI 647
Query: 638 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 697
D P L+ ++ I+ L ++ LK R GAL L + +
Sbjct: 648 RKDD--------------PNLH-----DEITEGIRLLNTLALKLKAGRMAAGALNLASPE 688
Query: 698 PVFLFD--EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH---P 752
D E P D + N L EEFMLLAN + A+ I FP +A+LRRH P
Sbjct: 689 VKIHLDTAESSDPIDVEQKELRETNSLVEEFMLLANISVAKKIQETFPQTAVLRRHLPPP 748
Query: 753 APNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQ 811
N KL++ + GL LD SSSG SL++ L F+ L+ ATR M
Sbjct: 749 KTNFEKLQDI--LRKRKGLTLDVSSSGALADSLDKC---LDPSEPAFNTLVRIMATRCML 803
Query: 812 LASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
A YFCSG DT +GHY LA P+YTHFTSP+RRY D++ HR L+AA+ L+
Sbjct: 804 SAEYFCSGSVSRDT-FGHYGLATPIYTHFTSPIRRYADVLAHRQLSAAINYTPLH 857
>gi|40225951|gb|AAH14124.2| DIS3L protein [Homo sapiens]
Length = 644
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 158/416 (37%), Positives = 235/416 (56%), Gaps = 17/416 (4%)
Query: 459 LHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC----VPWEVPQEELLSRKDLR- 513
+ V GR G++E +I IL EN+I FS + +P PW+V EE RKDLR
Sbjct: 1 VRVLGRIGDLEGEIATILVENSISVIPFSEAQMCEMPVNTPESPWKVSPEEEQKRKDLRK 60
Query: 514 NFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVY 573
+ +F+IDP D+DD LS+ L++G +GVHIADV++FV P + +DIEA+ R+T+ Y
Sbjct: 61 SHLVFSIDPKGCEDVDDTLSVRTLNNGNLELGVHIADVTHFVAPNSYIDIEARTRATTYY 120
Query: 574 MLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSY 632
+ R+ MLP +LS ++ SL GVDR A SI W+L+ A ++ W GRT+IRS KL Y
Sbjct: 121 LADRRYDMLPSVLSADLCSLLGGVDRYAVSIMWELDKASYEIKKVWYGRTIIRSAYKLFY 180
Query: 633 EHAQDIIDGKF----DVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTD 688
E AQ+++DG D+ LGE Q + ++V +I L ++++ ++ KR
Sbjct: 181 EAAQELLDGNLSVVDDIPEFKDLGEK----SRQAKLEELVWAIGKLTDIARHVRAKRDGC 236
Query: 689 GALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALL 748
GAL LE + D+ +D + +++ E M+LAN A+ I +FP ALL
Sbjct: 237 GALELEGVEVCVQLDDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALL 296
Query: 749 RRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATR 808
R+HP P+ E G +DT S+ SL+ A + D ++ +L + AT+
Sbjct: 297 RQHPPPHQEFFSELRECAKAKGFFIDTRSNKTLADSLDNAND--PHDPIVNRLLRSMATQ 354
Query: 809 PMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
M A YF +G ++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ +K
Sbjct: 355 AMSNALYFSTGSCAEE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDK 409
>gi|146298778|ref|YP_001193369.1| ribonuclease R [Flavobacterium johnsoniae UW101]
gi|146153196|gb|ABQ04050.1| ribonuclease R [Flavobacterium johnsoniae UW101]
Length = 726
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 176/519 (33%), Positives = 263/519 (50%), Gaps = 56/519 (10%)
Query: 347 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 406
KRP G V+ +IER + VG +++ F + ++
Sbjct: 132 KRPEGEVIEVIERD--KTEFVGVIDIQPNFAF------------------------VSTA 165
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 466
+PK + + KD +L E + ++V +I++W + + P V+ V G+ G
Sbjct: 166 NPKMYTDIFIPKD-------KLGEAENG---DVVLVKIEDWPKRADSPFGSVIRVLGKPG 215
Query: 467 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 526
E +I+AIL E + S F E + + + E+ R+D+R+ FTIDP A
Sbjct: 216 EHNTEIHAILAEYGL-PSDFPVEVEVYAQKLDTSIQESEIAKRRDMRDTLTFTIDPKDAK 274
Query: 527 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 586
D DDALS ++L +G +G+HIADVSY++ GT LD EA R+TSVY++ R +PMLP +L
Sbjct: 275 DFDDALSFKKLENGNFEIGIHIADVSYYLEEGTILDDEAYQRATSVYLVDRVVPMLPEVL 334
Query: 587 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 646
S SL P ++ FS ++++ V+++W GRTVI S + +YE AQ II+ K
Sbjct: 335 SNFACSLRPNEEKYTFSAIFEVSPTAQVINQWFGRTVIYSDQRFAYEEAQYIIETK---- 390
Query: 647 SSNTLGEGWPQLYGQFEWSDVVR-SIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEY 705
NT+ + SD +R + L E++KIL+ KR GA+ + + F D
Sbjct: 391 -DNTIPVDVSITGESYVVSDEIREATLKLDELAKILRKKRMQQGAISFDKVEVKFNLDAE 449
Query: 706 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAF 765
G P +D N L EEFMLLAN+ AE I + + + R H PN KL +
Sbjct: 450 GEPEGVYFKISKDANHLIEEFMLLANRKVAEYIGKQ-KKTFVYRIHDEPNEDKLIAMQTV 508
Query: 766 CSKHGLQLDTSSSGQFHQSLEQAREKL--KDDYVLFDILINYATRPMQLASYFCSGDFKD 823
+K G ++D + G +SL E++ K + L D L A R M A Y S D
Sbjct: 509 IAKFGYKIDFRNKGDIAKSLNSLMEEVNGKKEQNLIDTL---AIRSMSKAKY--STD--- 560
Query: 824 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEA 862
+ GHY LAF Y+HFTSP+RRYPD++VHR L L+
Sbjct: 561 --NIGHYGLAFDYYSHFTSPIRRYPDVMVHRLLQYYLDG 597
>gi|393219308|gb|EJD04795.1| RNB-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 1024
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 189/552 (34%), Positives = 275/552 (49%), Gaps = 71/552 (12%)
Query: 347 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 406
K+PTGR+V II+R+ R V ++ + DA + S SV + Q P
Sbjct: 400 KQPTGRIVGIIKRNWR--AFVCHID-------RASLASDASTSLSLQSV----FAQ--PV 444
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 466
P++ + + P + +++ LV+ ID W+ S +P+ H + G
Sbjct: 445 SRALPRIRMRTRQAPSLLGQKI----------LVS--IDRWDVNSRYPEGHFVRALGAAE 492
Query: 467 EVEPQINAILYENAICCSGFSPESLSCLP--CVPWEVPQEELLS-----RKDLRNFCIFT 519
E + ++L E + F L CLP W VP +++ S R+DLRNF I +
Sbjct: 493 SKEAEQESLLLEYEVPYRPFGKAILDCLPKEGDSWVVPPKDISSPEWRDREDLRNFVICS 552
Query: 520 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 579
IDP D+DDAL +L +G GVHIADVS+FVLP +D EA R T+VY++ ++I
Sbjct: 553 IDPPGCQDIDDALHARQLPNGNIEAGVHIADVSHFVLPDNPMDHEAASRGTTVYLVDKRI 612
Query: 580 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDII 639
MLP LL + SL P V+RLAFS+ W++ S ++V+ ++VI S +YE AQ
Sbjct: 613 DMLPSLLGTNLCSLRPFVERLAFSVIWEITSEAEIVNVRFSKSVIASKAAFTYEEAQ--- 669
Query: 640 DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPV 699
L + P + ++ SI+ L +++ L+ R GAL L + +
Sbjct: 670 -----------LRKDDPH-----QQDELTSSIRLLNSLARKLRAGRMAAGALNLASPEVK 713
Query: 700 FLFD--EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH---PAP 754
D E P D + N L EEFMLLAN + A+ I FP +A+LRRH P
Sbjct: 714 IHLDSSESSDPIDVEQKELHETNSLVEEFMLLANISVAKRIQETFPQTAVLRRHLPPPHT 773
Query: 755 NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLA 813
N KL++ + + LD SSSG SL++ + + F+ L+ ATR M A
Sbjct: 774 NFEKLQDI--LKKRKNMTLDVSSSGALAASLDKC---IDSNEPAFNTLVRIMATRCMLSA 828
Query: 814 SYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR--- 870
YFCSG DT + HY LA P+YTHFTSP+RRY D++ HR L AA+ L+
Sbjct: 829 EYFCSGSVARDT-FAHYGLASPIYTHFTSPIRRYADVLAHRQLAAAINYAPLHASLHSKS 887
Query: 871 ---RMLPKNNHR 879
R+L NHR
Sbjct: 888 IVERILNVVNHR 899
>gi|404486882|ref|ZP_11022070.1| ribonuclease R [Barnesiella intestinihominis YIT 11860]
gi|404335936|gb|EJZ62402.1| ribonuclease R [Barnesiella intestinihominis YIT 11860]
Length = 712
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 187/564 (33%), Positives = 273/564 (48%), Gaps = 89/564 (15%)
Query: 308 INGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKR---PTGRVVSIIERSPRRD 364
+NG + +D E + +++N M+A++ + Y +R G VV I+E++P+
Sbjct: 91 VNGKNHVITDDDESIFIAERN-AMHAMDGDRVRVLVYAKRRGHDAEGEVVEIVEKTPQI- 148
Query: 365 GIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDL--PD 422
VG L V + F + K VL D+ P
Sbjct: 149 -FVGTLEVQKHFAFLLTDNK------------------------------VLANDIFIPK 177
Query: 423 SIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAIC 482
+ K + GD + RI EW + + P V+ + G GE +I+AIL E +
Sbjct: 178 TALKGGKTGDKAV------VRITEWPDRARNPYGEVVDILGPAGENNTEIHAILAEFGLP 231
Query: 483 CSGFSPESL-SCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGI 541
PE++ +P + EE+ +R+D R FTIDP A D DDALSI RLS+G
Sbjct: 232 YR--YPEAVEKAANKIPDAITDEEIAAREDFRQVTTFTIDPKDAKDFDDALSIRRLSNGN 289
Query: 542 SRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLA 601
VGVHIADVSY+V PG+ +D EA+ R TSVY++ R +PMLP L E+ SL P D+L
Sbjct: 290 WEVGVHIADVSYYVKPGSIIDKEAESRGTSVYLVDRVVPMLPERLCNEICSLRPDEDKLT 349
Query: 602 FSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQ 661
FS ++LN +V I RTVIRS + +YE AQ++I+ GEG
Sbjct: 350 FSCIFELNGNAEVQKSHIARTVIRSNRRFAYEEAQEVIE----------TGEG------- 392
Query: 662 FEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNF 721
D I +L ++++ L+ +RF +G++ + + F DE G P ++ N
Sbjct: 393 ----DYKEEILALNDLAQKLRKRRFDNGSINFDRHEVKFDIDESGKPIGVYFKVSKEANK 448
Query: 722 LFEEFMLLANKTAAEVI----ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS 777
L EEFMLLAN+T AE I P + + R H P+ K+ F AF ++ G ++ T
Sbjct: 449 LIEEFMLLANRTVAEFIGKPKDGKKPKAFVYRVHDLPDPDKMASFAAFITRFGYKIKTEG 508
Query: 778 SGQ-----FHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYAL 832
S + L + K +++ V A R M A Y + GHY L
Sbjct: 509 SKADLSKGINSLLANVQGKPEENLVE-----TIAIRAMAKAVYTT-------VNIGHYGL 556
Query: 833 AFPVYTHFTSPLRRYPDLVVHRTL 856
+F YTHFTSP+RRYPDL+VHR L
Sbjct: 557 SFDYYTHFTSPIRRYPDLMVHRLL 580
>gi|323346611|gb|EGA80897.1| Dis3p [Saccharomyces cerevisiae Lalvin QA23]
Length = 1001
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 232/751 (30%), Positives = 344/751 (45%), Gaps = 136/751 (18%)
Query: 160 FAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEGD 219
F ++S V L+ G ++ +++ +N LE + VLI G NRA GD
Sbjct: 255 FPEYYSTARVMGGLKNGVLYQGNIQISEYNFLEGSVSLPRFSKPVLIVGQKNLNRAFNGD 314
Query: 220 FVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCTLL 279
V++++ S W SSIV DS H D+ D+
Sbjct: 315 QVIVELLPQSEWKA------PSSIVLDSE--------HFDV---NDNPDI---------- 347
Query: 280 SEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSA 339
E G DDD ++E +S +T +S Q+ + A
Sbjct: 348 -EAG---DDDDNNE---------------------SSSNTTVISDKQRR-----LLAKDA 377
Query: 340 MISSYPTK-RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDR 398
MI+ K +PT +VV I RS W Y G + +SS +
Sbjct: 378 MIAQRSKKIQPTAKVVYIQRRS--------------WRQYVGQLAPSSVDPQSSST---- 419
Query: 399 EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHV 458
+ ++++ K LP ++ R ++ +V + ID W +P H
Sbjct: 420 ----------QNVFVILMXKCLP-KVRIRTRRAAELLDKRIVIS-IDSWPTTHKYPLGHF 467
Query: 459 LHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV------------PWEVPQEEL 506
+ G + + A+L E+ + FS + L CLP P V ++ L
Sbjct: 468 VRDLGTIESAQAETEALLLEHDVEYRPFSKKVLECLPAEGHDWKAPTKLDDPEAVSKDPL 527
Query: 507 LS-RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEA 565
L+ RKDLR+ I +IDP D+DDAL ++L +G VGVHIADV++FV PGTALD E
Sbjct: 528 LTKRKDLRDKLICSIDPPGCVDIDDALHAKKLPNGNWEVGVHIADVTHFVKPGTALDAEG 587
Query: 566 QVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIR 625
R TSVY++ ++I MLP+LL ++ SL P VDR AFS+ W+L+ + ++V+ ++VIR
Sbjct: 588 AARGTSVYLVDKRIDMLPMLLGTDLCSLKPYVDRFAFSVIWELDDSANIVNVNFMKSVIR 647
Query: 626 SCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKR 685
S SYE AQ ID K ++ L G +++L ++S LK KR
Sbjct: 648 SREAFSYEQAQLRIDDK---TQNDELTMG----------------MRALLKLSVKLKQKR 688
Query: 686 FTDGALRLENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPD 744
GAL L + + V + E P + + N L EEFMLLAN + A I AFP
Sbjct: 689 LEAGALNLASPEVKVHMDSETSDPNEVEIKKLLATNSLVEEFMLLANISVARKIYDAFPQ 748
Query: 745 SALLRRHPAP---NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDI 801
+A+LRRH AP N L E ++ + + SS SL++ + +D Y F+
Sbjct: 749 TAMLRRHAAPPSTNFEILNEM--LNTRKNMSISLESSKALADSLDRCVDP-EDPY--FNT 803
Query: 802 LIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
L+ +TR M A YF SG + D+ HY LA +YTHFTSP+RRY D+V HR L A+
Sbjct: 804 LVRIMSTRCMMAAQYFYSGAYS-YPDFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAI 862
Query: 861 EAEKLYWKHR-----RMLPKNNHREGVRGRF 886
E L HR M+ +N +R+ +F
Sbjct: 863 GYEPLSLTHRDKNKMDMICRNINRKHRNAQF 893
>gi|350401245|ref|XP_003486097.1| PREDICTED: exosome complex exonuclease RRP44-like [Bombus
impatiens]
Length = 981
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 188/592 (31%), Positives = 284/592 (47%), Gaps = 83/592 (14%)
Query: 347 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 406
K PTG+VV II R+ R+ + + Q N +G R P
Sbjct: 333 KTPTGKVVGIIRRNWRQ-----YCGILQPSNIEGNVRH-----------------LFVPA 370
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 466
K PK+ + + K+R+ +VA ID W S +P H + G G
Sbjct: 371 ERKIPKIRIETRQYTVLCKQRI----------IVA--IDSWPRNSRYPLGHFVRALGEIG 418
Query: 467 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 526
+ IL E+ I S FS LS LP + W V ++ R+DLR + ++DP T
Sbjct: 419 NKTTENEVILLEHDIPHSRFSDAVLSSLPEISWRVTDVDIAQREDLRYLDVCSVDPPGCT 478
Query: 527 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 586
D+DDAL L +G VGVHIADV++FV PGTALD EA +RST+VY++ +I M+P LL
Sbjct: 479 DIDDALHCRDLPNGNLEVGVHIADVTHFVRPGTALDKEAALRSTTVYLVDTRIHMIPELL 538
Query: 587 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 646
S SL ++L FS W+++ ++++ ++VI S ++Y+ AQ ID DV
Sbjct: 539 STNFCSLREKEEKLTFSCIWEMDRDANIINTRYCKSVICSRAAMTYDEAQLKID---DVT 595
Query: 647 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EY 705
++L V+S+++L ++K LK +R +GAL L + + F D E
Sbjct: 596 QQDSL----------------VKSLRNLNNLAKKLKKRRLDNGALLLASPEVRFEVDCET 639
Query: 706 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAF 765
P + + + N + EEFMLLAN + A+ I FP+ A+LRRHP P
Sbjct: 640 HDPIEVEVKKLRETNSMVEEFMLLANISVAKKILEEFPECAVLRRHPEPPPTNFEPLIKA 699
Query: 766 CSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDD 824
G ++ S SL + K+ F+ ++ ATR M A YF SG
Sbjct: 700 AKNQGFTINVDSGKALADSLNKCH---KESNPYFNTMLRILATRCMMQAVYFVSG-MHQP 755
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY---------------WKH 869
+++ HY LA PVYTHFTSP+RRY D++VHR L + A+ Y +
Sbjct: 756 SEYYHYGLACPVYTHFTSPIRRYADVMVHRLLAVCIGADATYPDLLDKKKNHTLCQNMNY 815
Query: 870 RRMLPKNNHREGVRGRFLTGIFYDKDAAESLEG------REALSVAALKYGV 915
R + + ++R V T +F+ ++ + EG + AL + +KYG+
Sbjct: 816 RHRMAQYSNRASV--ALNTHLFF-REKIQDEEGYILFVRKNALQILIIKYGL 864
Score = 47.8 bits (112), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 42/75 (56%)
Query: 158 KIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVE 217
+IF H + ++E ++ G + ++ + N LE + ++GV+ + I G + NRAV+
Sbjct: 222 EIFPCHLTPFELHEGIKNGKLLQGTFQASKENFLEGFVNVDGVEKSIFIQGRSNLNRAVD 281
Query: 218 GDFVLIKVDRLSLWA 232
GD V++K+ W+
Sbjct: 282 GDAVVVKLLPEDQWS 296
>gi|119184632|ref|XP_001243197.1| hypothetical protein CIMG_07093 [Coccidioides immitis RS]
gi|392866079|gb|EAS28686.2| VacB and RNase II family 3'-5' exoribonuclease [Coccidioides
immitis RS]
Length = 1044
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 189/533 (35%), Positives = 272/533 (51%), Gaps = 74/533 (13%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGS-RKDAKKNRSSLSVPDREYIQLTPT 406
+PT RVV +I+R+ R+ VG N GGS +A R ++ + + P
Sbjct: 380 QPTARVVGVIKRNWRQ--YVG--------NIDGGSFSSEASSGRR------QQAVFVIPM 423
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG--- 463
+ PK+ + + + + +R + ID W+ +S +P H + G
Sbjct: 424 DKRVPKIKIRTRQASELLGQR------------ILITIDAWDRDSRYPTGHFVRSLGELE 471
Query: 464 -RGGEVEPQINAILYENAICCSGFSPESLSCLP--CVPWEVPQ--EELL--SRKDLRNFC 516
+G E E A+L E + FS L+CLP W+VP ++ L RKDLR+
Sbjct: 472 TKGAETE----ALLLEYDVQYRPFSQTVLNCLPPEGHSWKVPGNLDDPLWKDRKDLRDLL 527
Query: 517 IFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQ 576
+ +IDP D+DD L L +G VGVHIADVS+FV P A+DIEA +R T+VY++
Sbjct: 528 VCSIDPPGCQDIDDTLHSRPLPNGNFEVGVHIADVSHFVQPNNAMDIEASMRGTTVYLVD 587
Query: 577 RKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQ 636
++I MLP+LL ++ SL P V+R AFS+ W++ ++V ++VI S SYE AQ
Sbjct: 588 KRIDMLPMLLGTDLCSLKPYVERFAFSVIWEMTPDAEIVSANFTKSVILSKEAFSYEQAQ 647
Query: 637 DIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENS 696
ID + + ++ +S+++L +SKIL+ KR GAL L +
Sbjct: 648 LRID-------------------DESKKDELTQSMRTLLRMSKILRQKRMDAGALNL--A 686
Query: 697 KPVFLFDEYGTPYDSVLSGRED----LNFLFEEFMLLANKTAAEVIARAFPDSALLRRHP 752
P + D V + N L EEFMLLAN T A I ++FP +ALLRRH
Sbjct: 687 SPEVRIETESELNDPVADVKTKALLATNSLVEEFMLLANITVASRIYQSFPQTALLRRHA 746
Query: 753 APNMRKLREFEAFCS-KHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPM 810
P + + A S K GL LD SSS SL++ + F+ LI ATR M
Sbjct: 747 TPPPQNFEQLIAQLSKKRGLTLDVSSSLALANSLDKC---VDPSNPFFNTLIRILATRCM 803
Query: 811 QLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE 863
A YFC+G ++++ HY LA +YTHFTSP+RRY DLVVHR L AA+ E
Sbjct: 804 TSAEYFCAGAHA-ESEFRHYGLASSIYTHFTSPIRRYADLVVHRQLAAAIGYE 855
Score = 44.3 bits (103), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
I+ ++SM + L G + ++ V+ +N LE ++ +LI G NRA+ G
Sbjct: 255 IYPEYYSMSKLMTGLRAGTLHQGIFNVSPYNYLEGSVQVAAFDKSLLILGRENSNRAIAG 314
Query: 219 DFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEAN 254
D V+++V W S ++ IV++ L + N
Sbjct: 315 DLVVVEVLPKDQWK-----SPSTKIVDEEALTKDEN 345
>gi|365763226|gb|EHN04756.1| Dis3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1001
Score = 260 bits (665), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 232/751 (30%), Positives = 344/751 (45%), Gaps = 136/751 (18%)
Query: 160 FAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEGD 219
F ++S V L+ G ++ +++ +N LE + VLI G NRA GD
Sbjct: 255 FPEYYSTARVMGGLKNGVLYQGNIQISEYNFLEGSVSLPRFSKPVLIVGQKNLNRAFNGD 314
Query: 220 FVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCTLL 279
V++++ S W SSIV DS H D+ D+
Sbjct: 315 QVIVELLPQSEWKA------PSSIVLDSE--------HFDV---NDNPDI---------- 347
Query: 280 SEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSA 339
E G DDD ++E +S +T +S Q+ + A
Sbjct: 348 -EAG---DDDDNNE---------------------SSSNTTVISDKQRR-----LLAKDA 377
Query: 340 MISSYPTK-RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDR 398
MI+ K +PT +VV I RS W Y G + +SS +
Sbjct: 378 MIAQRSKKIQPTAKVVYIQRRS--------------WRQYVGQLAPSSVDPQSSST---- 419
Query: 399 EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHV 458
+ ++++ K LP ++ R ++ +V + ID W +P H
Sbjct: 420 ----------QNVFVILMXKCLP-KVRIRTRRAAELLDKRIVIS-IDSWPTTHKYPLGHF 467
Query: 459 LHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV------------PWEVPQEEL 506
+ G + + A+L E+ + FS + L CLP P V ++ L
Sbjct: 468 VRDLGTIESAQAETEALLLEHDVEYRPFSKKVLECLPAEGHDWKAPTKLDDPEAVSKDPL 527
Query: 507 LS-RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEA 565
L+ RKDLR+ I +IDP D+DDAL ++L +G VGVHIADV++FV PGTALD E
Sbjct: 528 LTKRKDLRDKLICSIDPPGCVDIDDALHAKKLPNGNWEVGVHIADVTHFVKPGTALDAEG 587
Query: 566 QVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIR 625
R TSVY++ ++I MLP+LL ++ SL P VDR AFS+ W+L+ + ++V+ ++VIR
Sbjct: 588 AARGTSVYLVDKRIDMLPMLLGTDLCSLKPYVDRFAFSVIWELDDSANIVNVNFMKSVIR 647
Query: 626 SCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKR 685
S SYE AQ ID K ++ L G +++L ++S LK KR
Sbjct: 648 SREAFSYEQAQLRIDDK---TQNDELTMG----------------MRALLKLSVKLKQKR 688
Query: 686 FTDGALRLENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPD 744
GAL L + + V + E P + + N L EEFMLLAN + A I AFP
Sbjct: 689 LEAGALNLASPEVKVHMDSETSDPNEVEIKKLLATNSLVEEFMLLANISVARKIYDAFPQ 748
Query: 745 SALLRRHPAP---NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDI 801
+A+LRRH AP N L E ++ + + SS SL++ + +D Y F+
Sbjct: 749 TAMLRRHAAPPSTNFEILNEM--LNTRKNMSISLESSKALADSLDRCVDP-EDPY--FNT 803
Query: 802 LIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
L+ +TR M A YF SG + D+ HY LA +YTHFTSP+RRY D+V HR L A+
Sbjct: 804 LVRIMSTRCMMAAQYFYSGAYS-YPDFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAI 862
Query: 861 EAEKLYWKHR-----RMLPKNNHREGVRGRF 886
E L HR M+ +N +R+ +F
Sbjct: 863 GYEPLSLTHRDKNKMDMICRNINRKHRNAQF 893
>gi|440297048|gb|ELP89778.1| exosome complex exonuclease RRP44, putative [Entamoeba invadens
IP1]
Length = 914
Score = 260 bits (664), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 192/603 (31%), Positives = 280/603 (46%), Gaps = 81/603 (13%)
Query: 314 STSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVN 373
S D T+ V NA+E PTG+VV +++R+
Sbjct: 300 SVVDVTQDVEEHTPTTDQNAME---------TEGNPTGKVVGVLKRN------------- 337
Query: 374 QWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDA 433
W G +K+ N S+ + PT+ YP P IK R A
Sbjct: 338 -WKPVPGYIKKEIGGNYST-------NLLFLPTNKSYP---------PIRIKAR---DPA 377
Query: 434 TIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSC 493
+ + + A ID+W+ S +P H + G G+ + AIL + I F L C
Sbjct: 378 RLASQRLLAVIDQWDTTSRYPTGHYVATLGNVGDRASETEAILELHDIPHYEFPETVLRC 437
Query: 494 LPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSY 553
LP +P+E+ E L R+D R + +IDP D+DDAL + L +G +GVHIADVS
Sbjct: 438 LPKLPFEITDEYLKGRRDFRRCNVCSIDPPGCKDIDDALHCKLLPNGHFEIGVHIADVSC 497
Query: 554 FVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGD 613
F+ P T +D EA+ R T+VY+ R+I MLP L+E V S+ D L FS+ W++++ G+
Sbjct: 498 FLKPNTTMDEEARKRGTTVYLADRRIDMLPKPLTEIVCSITEKTDTLTFSVVWEVDANGE 557
Query: 614 VVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKS 673
+++ + ++ S +Y AQ +ID K D SD + +++
Sbjct: 558 IINCEYTKGIVNSYKAFAYGVAQGVIDNKED-------------------QSDRAKELRA 598
Query: 674 LYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKT 733
L +SK LK KR GAL L +S+ DE P + N + EE+MLLAN
Sbjct: 599 LLMISKKLKQKRLEAGALVLASSEISIEKDEKYNPVGVKEYQTYETNSMVEEYMLLANVW 658
Query: 734 AAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLK 793
A+ I AFP ALLRRHP P+ G +LD SSS SL
Sbjct: 659 VAKKIYDAFPQCALLRRHPPPDEHAFEWLSNVMKTRGQKLDFSSSKALSDSLANCES--S 716
Query: 794 DDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVH 853
D V+ I+ TR MQ A YF SG F + ++ HY LA +YTHFTSP+RRY D++VH
Sbjct: 717 KDPVVGKIMRILVTRCMQQAKYFSSGYFPMN-EYRHYGLACDIYTHFTSPIRRYADVLVH 775
Query: 854 RTLNAALEAEKLYW--------------KHRRMLPKNNHREGVRGRFLTGIFYDKDAAES 899
R L A+ +++ +R + ++ RE + + T IFY KD
Sbjct: 776 RFLAMAIGFDRIELTITKESVKEIADNINYRHTMAQHAGRESI--QMYTLIFY-KDKEVE 832
Query: 900 LEG 902
++G
Sbjct: 833 VDG 835
>gi|303320481|ref|XP_003070240.1| exosome complex exonuclease RRP44, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240109926|gb|EER28095.1| exosome complex exonuclease RRP44, putative [Coccidioides posadasii
C735 delta SOWgp]
Length = 1044
Score = 260 bits (664), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 189/533 (35%), Positives = 272/533 (51%), Gaps = 74/533 (13%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGS-RKDAKKNRSSLSVPDREYIQLTPT 406
+PT RVV +I+R+ R+ VG N GGS +A R ++ + + P
Sbjct: 380 QPTARVVGVIKRNWRQ--YVG--------NIDGGSFSSEASSGRR------QQAVFVIPM 423
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG--- 463
+ PK+ + + + + +R + ID W+ +S +P H + G
Sbjct: 424 DKRVPKIKIRTRQASELLGQR------------ILITIDAWDRDSRYPTGHFVRSLGELE 471
Query: 464 -RGGEVEPQINAILYENAICCSGFSPESLSCLP--CVPWEVPQ--EELL--SRKDLRNFC 516
+G E E A+L E + FS L+CLP W+VP ++ L RKDLR+
Sbjct: 472 TKGAETE----ALLLEYDVQYRPFSQAVLNCLPPEGHSWKVPGNLDDPLWKDRKDLRDLL 527
Query: 517 IFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQ 576
+ +IDP D+DD L L +G VGVHIADVS+FV P A+DIEA +R T+VY++
Sbjct: 528 VCSIDPPGCQDIDDTLHSRPLPNGNFEVGVHIADVSHFVQPNNAMDIEASMRGTTVYLVD 587
Query: 577 RKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQ 636
++I MLP+LL ++ SL P V+R AFS+ W++ ++V ++VI S SYE AQ
Sbjct: 588 KRIDMLPMLLGTDLCSLKPYVERFAFSVIWEMTPDAEIVSANFTKSVILSKEAFSYEQAQ 647
Query: 637 DIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENS 696
ID + + ++ +S+++L +SKIL+ KR GAL L +
Sbjct: 648 LRID-------------------DESKKDELTQSMRTLLRMSKILRQKRMDAGALNL--A 686
Query: 697 KPVFLFDEYGTPYDSVLSGRED----LNFLFEEFMLLANKTAAEVIARAFPDSALLRRHP 752
P + D V + N L EEFMLLAN T A I ++FP +ALLRRH
Sbjct: 687 SPEVRIETESELNDPVADVKTKALLATNSLVEEFMLLANITVASRIYQSFPQTALLRRHA 746
Query: 753 APNMRKLREFEAFCS-KHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPM 810
P + + A S K GL LD SSS SL++ + F+ LI ATR M
Sbjct: 747 TPPPQNFEQLIAQLSKKRGLTLDVSSSLALANSLDKC---VDPSNPFFNTLIRILATRCM 803
Query: 811 QLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE 863
A YFC+G ++++ HY LA +YTHFTSP+RRY DLVVHR L AA+ E
Sbjct: 804 TSAEYFCAGAHA-ESEFRHYGLASSIYTHFTSPIRRYADLVVHRQLAAAIGYE 855
Score = 43.5 bits (101), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
I+ ++SM + L G + ++ V+ +N LE ++ +LI G NRA+ G
Sbjct: 255 IYPEYYSMSKLMTGLRAGTLHQGIFNVSPYNYLEGSVQVAAFDKSLLILGRENSNRAIAG 314
Query: 219 DFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEAN 254
D V++++ W S ++ IV++ L + N
Sbjct: 315 DLVVVEILPKDQWK-----SPSTKIVDEEALTKDEN 345
>gi|358395895|gb|EHK45282.1| hypothetical protein TRIATDRAFT_128033 [Trichoderma atroviride IMI
206040]
Length = 986
Score = 260 bits (664), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 214/717 (29%), Positives = 325/717 (45%), Gaps = 123/717 (17%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
I+ +++ + ++ G + ++ V+ +N LE K+ +LI G NRA++G
Sbjct: 252 IYPEYYTASRMMTGVKAGLLHQGIFNVSPYNYLEGSIKVPAFPKSLLILGRENINRAIDG 311
Query: 219 DFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCTL 278
D V++++ W S ++ I+E+ + N + + D
Sbjct: 312 DVVVVELLPQDQWK-----SPSTKIIEEDTITKNENA------DAEERQD---------F 351
Query: 279 LSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLS 338
+S+K ER+ E+V +Q+ G N ++
Sbjct: 352 VSDK------------------ERKALQ-------------EEVKRTQKASGENQLQ--- 377
Query: 339 AMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDR 398
PT +VV +++R+ W Y G + N+ S
Sbjct: 378 ----------PTAKVVGVVKRN--------------WRQYVGHI-DPSTANKGSSQGRKL 412
Query: 399 EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHV 458
+ + L P K PK+ + + + + + KRL LV +D W+ +S P H+
Sbjct: 413 DSVFLIPMDKKIPKIRLRTRQVSELLGKRL----------LVT--VDSWDRDSRHPVGHL 460
Query: 459 LHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP--CVPWEVPQEE----LLSRKDL 512
+ G + A+L E + F L CLP W+VP + R+DL
Sbjct: 461 VRSLGELETKAAETEALLLEWDVQYRPFPKTVLDCLPKEGHDWKVPASKEDPGWRDREDL 520
Query: 513 RNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSV 572
R I +IDP D+DDAL L +G VGVHIADVS FV P A+D EA +R T+V
Sbjct: 521 RELLICSIDPPGCQDIDDALHARLLPNGNYEVGVHIADVSNFVKPANAMDTEASIRGTTV 580
Query: 573 YMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSY 632
Y++ ++I MLP+LL ++ SL P V+R AF++ W+LN D+V+ ++VI S SY
Sbjct: 581 YLVDKRIDMLPMLLGTDLCSLKPYVERFAFTVIWELNDNADIVNVRFTKSVIASREAFSY 640
Query: 633 EHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALR 692
E AQ ID + + D+ + ++ L +SK LK KR GAL
Sbjct: 641 EQAQLRID-------------------DESQQDDLTKGMRMLLMLSKKLKKKRMDAGALS 681
Query: 693 LENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH 751
L + + V + E P D D N L EEFML AN + A I AFP +A+LRRH
Sbjct: 682 LSSPEIKVHMESESSDPIDVKTKELLDTNSLVEEFMLFANVSVAAKIYEAFPQTAILRRH 741
Query: 752 PAPNMRKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRP 809
AP E + K GL+L T SS SL++ + D F+ L+ ATR
Sbjct: 742 AAPPKTNFDELADQLRIKRGLELRTDSSKALADSLDKC---VDDKDPFFNTLVRIMATRC 798
Query: 810 MQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
M A YFCSG + ++ HY LA +YTHFTSP+RRY DL+ HR L AA+ E ++
Sbjct: 799 MMSAEYFCSGT-QSYPEFRHYGLASEIYTHFTSPIRRYADLLAHRQLAAAIGYEAVH 854
>gi|212645896|ref|NP_501835.2| Protein DIS-3 [Caenorhabditis elegans]
gi|221222479|sp|Q17632.2|RRP44_CAEEL RecName: Full=Probable exosome complex exonuclease RRP44; AltName:
Full=Protein DIS3 homolog; AltName: Full=Ribosomal
RNA-processing protein 44
gi|189310666|emb|CAA94677.2| Protein DIS-3 [Caenorhabditis elegans]
Length = 961
Score = 259 bits (663), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 163/444 (36%), Positives = 235/444 (52%), Gaps = 27/444 (6%)
Query: 427 RLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSG 485
R+E A T+ + + ID W +S +P H + G G E + +L E+ I +
Sbjct: 393 RIETEQAETLSQQRIVVAIDHWPRDSKYPLGHYVRSIGEMGSRETENEVLLLEHDIPHAP 452
Query: 486 FSPESLSCLPCVPWEVPQEE---LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGIS 542
FS L CLP WE E L R DLR+ I ++DP TD+DDAL +++ + +
Sbjct: 453 FSESVLDCLPREEWEPDLTENRGPLPRVDLRDLTICSVDPLGCTDIDDALHCKQIGEDLF 512
Query: 543 RVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAF 602
VGVHIADV++FV PGTA+D EA +R T+VY+ R+I MLP LLS + SL +R AF
Sbjct: 513 EVGVHIADVTHFVRPGTAIDDEAALRGTTVYLCDRRIDMLPCLLSSNLCSLRGEEERYAF 572
Query: 603 SIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQF 662
S W + S+ D+ +++I+S L+YE AQ+IID P+
Sbjct: 573 SCIWTMTSSADIQSVKYHKSLIKSKAALTYEKAQEIIDD--------------PK----- 613
Query: 663 EWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNF 721
E +DV ++ L ++SK+L +R +GAL L +S+ F D E TP + D +
Sbjct: 614 EQNDVALGLRGLMKLSKVLNARRTGNGALTLASSEVRFDMDWESRTPKKVMEKQHLDTHS 673
Query: 722 LFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQF 781
+ EEFMLLAN + AE I +PD ALLRRHP P + G ++ S
Sbjct: 674 MVEEFMLLANISVAEKILEEYPDCALLRRHPVPLKESYKPLVEAARHRGFEIIVESGKGL 733
Query: 782 HQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFT 841
SL + + K + +L +L TR M A YF +G + H+ LA +YTHFT
Sbjct: 734 ADSLNRCVD--KKNPMLNRLLRMLTTRCMTQAVYFSAGTVP-VPQYQHFGLACAIYTHFT 790
Query: 842 SPLRRYPDLVVHRTLNAALEAEKL 865
SP+RRY D++VHR L AA+ A+ +
Sbjct: 791 SPIRRYADVIVHRLLAAAIGADDI 814
>gi|312131136|ref|YP_003998476.1| rnase r [Leadbetterella byssophila DSM 17132]
gi|311907682|gb|ADQ18123.1| RNAse R [Leadbetterella byssophila DSM 17132]
Length = 739
Score = 259 bits (663), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 172/523 (32%), Positives = 254/523 (48%), Gaps = 70/523 (13%)
Query: 347 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 406
K P GR+V I+ R+ R+ +VG + V + NY +L PD
Sbjct: 130 KNPEGRIVEIVTRA--RNTVVGKIKV--FKNY-------------ALVSPD--------- 163
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 466
VK ++I ++ + +LV + + + V V G+ G
Sbjct: 164 ----------VKGFHENIFVPKDKINGATSDDLVIVELITYPQLGIQASGEVKAVLGKSG 213
Query: 467 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 526
+ ++NAI+ E + F L + +P+EE+ R+D+R+ FTIDP A
Sbjct: 214 DNNAEMNAIMAEFGLPVD-FPQAVLDQAAAISEAIPEEEIKKRRDVRDILTFTIDPFDAK 272
Query: 527 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 586
D DDALS L +G VG+HIADVS++V PGT L+ EA R+TSVY++ R IPMLP L
Sbjct: 273 DFDDALSFRTLENGNYEVGIHIADVSHYVRPGTLLEEEALKRATSVYLVDRTIPMLPEKL 332
Query: 587 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 646
S + SL P D+L FS +++N +V+ W GR ++ S + +YE AQ+I+DGK D
Sbjct: 333 SNNLCSLRPHEDKLVFSAIFEMNDKAEVLKEWFGRCIMHSDRRFTYEEAQEILDGKEDET 392
Query: 647 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYG 706
S L +L ++ IL+D+RF GA E + F DE G
Sbjct: 393 YSPVL--------------------HTLNNMAHILRDERFKKGAFNFETDEVKFRLDEEG 432
Query: 707 TPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPD-----SALLRRHPAPNMRKLRE 761
P R+D + L EEFMLLAN+ A + P + + R H PN KL
Sbjct: 433 KPLGIYQKVRKDAHKLIEEFMLLANRRVATFVHNKGPKDQEPYTMVYRVHEPPNPSKLET 492
Query: 762 FEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDF 821
F F +K G + + S+ Q QSL + +++ + ++L + A R M A Y
Sbjct: 493 FVRFANKMGFSIKSGSTQQLSQSLNRLMTEIEGKPIQ-NVLESLAVRTMSKARYSTQ--- 548
Query: 822 KDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
+ GH+ LAF Y+HFTSP+RRYPD++ HR L L+ K
Sbjct: 549 ----NLGHFGLAFDHYSHFTSPIRRYPDIMAHRMLQHYLDGGK 587
>gi|367043660|ref|XP_003652210.1| hypothetical protein THITE_2113438 [Thielavia terrestris NRRL 8126]
gi|346999472|gb|AEO65874.1| hypothetical protein THITE_2113438 [Thielavia terrestris NRRL 8126]
Length = 985
Score = 259 bits (662), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 182/527 (34%), Positives = 259/527 (49%), Gaps = 59/527 (11%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 407
+PT +VV +++R+ R+ VG ++ + RK ++ + L P
Sbjct: 375 QPTAKVVGVVKRNWRQ--YVGHIDQSSVSQSAQQGRK-------------QDTVFLIPMD 419
Query: 408 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 467
K PK+ + + + + + KR + ID W+ S P H + G
Sbjct: 420 KKIPKIRLRTRQVAELVGKR------------ILVTIDAWDRSSRHPTGHFVRSLGEMET 467
Query: 468 VEPQINAILYENAICCSGFSPESLSCLP--CVPWEVPQEE----LLSRKDLRNFCIFTID 521
+ A+L E + F L CLP W VPQ R+DLR+ I +ID
Sbjct: 468 KAAETEALLLEYDVQYRPFPKTVLDCLPKEGHDWRVPQSTDDPGWRGREDLRHLLICSID 527
Query: 522 PSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPM 581
P D+DDAL L +G VGVHIADVS+FV P TA+D EA +R T+VY++ ++I M
Sbjct: 528 PIGCQDIDDALHSRPLPNGNIEVGVHIADVSHFVKPNTAMDAEASIRGTTVYLVDKRIDM 587
Query: 582 LPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDG 641
LP+LL ++ SL P V+R AFS+ W+L+ D+V+ ++VI+S SYE AQ +D
Sbjct: 588 LPMLLGTDLCSLKPYVERYAFSVLWELSPDADIVNVRFTKSVIKSREAFSYEQAQLRVDD 647
Query: 642 KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVF 700
+ D+ +SI++L +S+ LK KR GAL L + + V
Sbjct: 648 P-------------------SQQDDLTKSIRTLLALSRKLKQKRMDAGALSLSSPEVKVQ 688
Query: 701 LFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLR 760
+ E P D D L EEFMLLAN + A I AFP +A+LRRH AP
Sbjct: 689 MESETSDPIDVKTKELLDTMSLVEEFMLLANVSVARKIYEAFPQTAILRRHGAPPKTNFD 748
Query: 761 EF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCS 818
E K GL L+ SS SL+ + + F+ L+ ATR M A YFCS
Sbjct: 749 ELANQLRVKRGLDLNVESSRALADSLDACVDPKEP---FFNTLVRIMATRCMMAAEYFCS 805
Query: 819 GDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 865
G + ++ HY LA +YTHFTSP+RRY DLV HR L AA+ E +
Sbjct: 806 GT-QAYPEFRHYGLASEIYTHFTSPIRRYADLVAHRQLAAAIGYEAV 851
>gi|431796052|ref|YP_007222956.1| ribonuclease R [Echinicola vietnamensis DSM 17526]
gi|430786817|gb|AGA76946.1| ribonuclease R [Echinicola vietnamensis DSM 17526]
Length = 724
Score = 259 bits (662), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 158/468 (33%), Positives = 243/468 (51%), Gaps = 32/468 (6%)
Query: 399 EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHV 458
E++ P++ +V K + I R + + + V +I EW +E P V
Sbjct: 160 EFVGRVEISPRFAFVVSDFKKMHHDIFIRKSDLNGAEHNQKVVVKITEWRDEDKNPTGKV 219
Query: 459 LHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIF 518
L V G GE E +I++I+ E + + E + + ++ + ++ SRKD R F
Sbjct: 220 LQVLGEAGEHEVEIHSIMAEFGLPFE-YPDEIVQEAEAISDKISKSDIKSRKDFRGVTTF 278
Query: 519 TIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRK 578
TIDP+ A D DDA+S +RL +G +GVHIADV+++V P T L+ EA R+TSVY++ R
Sbjct: 279 TIDPADAKDFDDAISYQRLPNGNIEMGVHIADVTHYVKPNTPLEKEAYDRATSVYLVDRT 338
Query: 579 IPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDI 638
IPMLP LS + SL P D+L FS ++L+ G V+ WIGRT+I S + +YE AQ+
Sbjct: 339 IPMLPERLSNGLCSLRPHEDKLTFSCVFELDEDGQVLKHWIGRTIIHSDRRFAYEEAQEN 398
Query: 639 IDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKP 698
ID + EG D + L ++K ++ +RF GA+ E +
Sbjct: 399 IDQQ----------EG-----------DFYSELTLLNNLAKKIRKRRFQQGAINFETVEV 437
Query: 699 VFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVI--ARAFPDSALLRRHPAPNM 756
F D+ GTP ++ R+D++ + EEFMLLANK AE + D+ + R H P++
Sbjct: 438 KFKLDDKGTPLGLMVKERKDIHKMIEEFMLLANKAVAEFVFNKNKGDDTFVYRIHDHPDL 497
Query: 757 RKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYF 816
+L F F K G ++ + + + +L + +++ ++L A R M A Y
Sbjct: 498 ERLETFANFAKKFGHEVSITEATRVSATLNKLMGEIEGKPEQ-NLLEQLAIRSMAKARYT 556
Query: 817 CSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
GH+ LAF YTHFTSP+RRYPD++VHR L L+ K
Sbjct: 557 TEPK-------GHFGLAFKHYTHFTSPIRRYPDMMVHRLLQHYLDGGK 597
>gi|190407321|gb|EDV10588.1| 3'-5' exoribonuclease complex subunit [Saccharomyces cerevisiae
RM11-1a]
gi|323335686|gb|EGA76969.1| Dis3p [Saccharomyces cerevisiae Vin13]
Length = 1001
Score = 259 bits (662), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 232/751 (30%), Positives = 344/751 (45%), Gaps = 136/751 (18%)
Query: 160 FAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEGD 219
F ++S V L+ G ++ +++ +N LE + VLI G NRA GD
Sbjct: 255 FPEYYSTARVMGGLKNGVLYQGNIQISEYNFLEGSVSLPRFSKPVLIVGQKNLNRAFNGD 314
Query: 220 FVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCTLL 279
V++++ S W SSIV DS H D+ D+
Sbjct: 315 QVIVELLPQSEWKA------PSSIVLDSE--------HFDV---NDNPDI---------- 347
Query: 280 SEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSA 339
E G DDD ++E +S +T +S Q+ + A
Sbjct: 348 -EAG---DDDDNNE---------------------SSSNTTVISDKQRR-----LLAKDA 377
Query: 340 MISSYPTK-RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDR 398
MI+ K +PT +VV I RS W Y G + +SS +
Sbjct: 378 MIAQRSKKIQPTAKVVYIQRRS--------------WRQYVGQLAPSSVDPQSSST---- 419
Query: 399 EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHV 458
+ ++++ K LP ++ R ++ +V + ID W +P H
Sbjct: 420 ----------QNVFVILMDKCLP-KVRIRTRRAAELLDKRIVIS-IDSWPTTHKYPLGHF 467
Query: 459 LHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV------------PWEVPQEEL 506
+ G + + A+L E+ + FS + L CLP P V ++ L
Sbjct: 468 VRDLGTIESAQAETEALLLEHDVEYRPFSKKVLECLPAEGHDWKAPTKLDDPEAVSKDPL 527
Query: 507 LS-RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEA 565
L+ RKDLR+ I +IDP D+DDAL ++L +G VGVHIADV++FV PGTALD E
Sbjct: 528 LTKRKDLRDKLICSIDPPGCVDIDDALHAKKLPNGNWEVGVHIADVTHFVKPGTALDAEG 587
Query: 566 QVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIR 625
R TSVY++ ++I MLP+LL ++ SL P VDR AFS+ W+L+ + ++V+ ++VIR
Sbjct: 588 AARGTSVYLVDKRIDMLPMLLGTDLCSLKPYVDRFAFSVIWELDDSANIVNVNFMKSVIR 647
Query: 626 SCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKR 685
S SYE AQ ID K ++ L G +++L ++S LK KR
Sbjct: 648 SREAFSYEQAQLRIDDK---TQNDELTMG----------------MRALLKLSVKLKQKR 688
Query: 686 FTDGALRLENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPD 744
GAL L + + V + E P + + N L EEFMLLAN + A I AFP
Sbjct: 689 LEAGALNLASPEVKVHMDSETSDPNEVEIKKLLATNSLVEEFMLLANISVARKIYDAFPQ 748
Query: 745 SALLRRHPAP---NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDI 801
+A+LRRH AP N L E ++ + + SS SL++ + +D Y F+
Sbjct: 749 TAMLRRHAAPPSTNFEILNEM--LNTRKNMSISLESSKALADSLDRCVDP-EDPY--FNT 803
Query: 802 LIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
L+ +TR M A YF SG + D+ HY LA +YTHFTSP+RRY D+V HR L A+
Sbjct: 804 LVRIMSTRCMMAAQYFYSGAYS-YPDFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAI 862
Query: 861 EAEKLYWKHR-----RMLPKNNHREGVRGRF 886
E L HR M+ +N +R+ +F
Sbjct: 863 GYEPLSLTHRDKNKMDMICRNINRKHRNAQF 893
>gi|348555427|ref|XP_003463525.1| PREDICTED: DIS3-like exonuclease 1-like [Cavia porcellus]
Length = 1055
Score = 259 bits (662), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 175/518 (33%), Positives = 277/518 (53%), Gaps = 38/518 (7%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 330 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 372
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK I+ ++ +A + ++ ID W S +P H + V GR G++
Sbjct: 373 RIPK-----------IRISTQQAEALQDFRVIV-HIDSWESTSLYPNGHFVRVLGRIGDL 420
Query: 469 EPQINAILYENAICCSGFSPESLSCLPC----VPWEV-PQEELLSRKDLRNFCIFTIDPS 523
E +I IL EN+I + FS L P PW+V +EE R R +F+IDP
Sbjct: 421 EGEIATILVENSISVTPFSEAQLCETPVNTPEKPWQVSAEEERRRRDLRRTHLVFSIDPK 480
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
D+DDALS+ LS+G +GVHIADV++FV + +D++A+ R+T+ Y+ R+ MLP
Sbjct: 481 GCEDVDDALSVRTLSNGDLELGVHIADVTHFVASNSYIDVKARTRATTYYLADRRYDMLP 540
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLN-SAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
+LS ++ SL GVDR A S+ W L+ ++ ++ W GRT+IRS KL YE AQ+++D
Sbjct: 541 SVLSADLCSLLGGVDRYAVSVMWQLDKTSYEIKTVWYGRTIIRSAYKLCYEAAQELLDRN 600
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
F + + + Q ++ +I+ L ++++ ++ KR GAL LE +
Sbjct: 601 FGIVDEIPELKNLDEKSKQARLEELAGAIERLTDIARHVRAKRNRCGALELEGVEVRVQL 660
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
D+ +D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 661 DDKNNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFAEL 720
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
+ G +DT S+ SL++A + D ++ +L + AT+ M A YF SG
Sbjct: 721 RKCAAAKGFTIDTRSNKALADSLDKAED--PTDPMVNRLLRSMATQAMSNALYFSSGSCA 778
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
++ ++ HY LA YTHFTSP+RRY D++VHR L AA+
Sbjct: 779 EE-EFHHYGLALGKYTHFTSPIRRYSDIIVHRLLMAAI 815
Score = 44.7 bits (104), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 10/113 (8%)
Query: 150 SHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHN-RLEAYCKIEG-------VQ 201
S E+ + +A H +E + + G + VN + ++EA+ +++G +
Sbjct: 215 SESQESHGREYAEHLPLEVLEAGIRLGRYVQGTLNVNKYRAQIEAFVRLQGASSKDSGLA 274
Query: 202 TDVLITGIAAQNRAVEGDFVLIKVDRLSLWAKMKG--FSNNSSIVEDSNLPTE 252
+D+LI G+ A+NRA+ GD V++++ W G N+S S P+E
Sbjct: 275 SDILIHGMKARNRAIHGDVVVVELLPKGEWKGRTGALCDNDSEDKASSEAPSE 327
>gi|6324552|ref|NP_014621.1| Dis3p [Saccharomyces cerevisiae S288c]
gi|2500547|sp|Q08162.1|RRP44_YEAST RecName: Full=Exosome complex exonuclease DIS3; AltName:
Full=Chromosome disjunction protein 3; AltName:
Full=Ribosomal RNA-processing protein 44
gi|1419801|emb|CAA99021.1| DIS3 [Saccharomyces cerevisiae]
gi|1754617|dbj|BAA11176.1| DIS3 protein [Saccharomyces cerevisiae]
gi|256269970|gb|EEU05222.1| Dis3p [Saccharomyces cerevisiae JAY291]
gi|285814867|tpg|DAA10760.1| TPA: Dis3p [Saccharomyces cerevisiae S288c]
Length = 1001
Score = 259 bits (661), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 232/751 (30%), Positives = 344/751 (45%), Gaps = 136/751 (18%)
Query: 160 FAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEGD 219
F ++S V L+ G ++ +++ +N LE + VLI G NRA GD
Sbjct: 255 FPEYYSTARVMGGLKNGVLYQGNIQISEYNFLEGSVSLPRFSKPVLIVGQKNLNRAFNGD 314
Query: 220 FVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCTLL 279
V++++ S W SSIV DS H D+ D+
Sbjct: 315 QVIVELLPQSEWKA------PSSIVLDSE--------HFDV---NDNPDI---------- 347
Query: 280 SEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSA 339
E G DDD ++E +S +T +S Q+ + A
Sbjct: 348 -EAG---DDDDNNE---------------------SSSNTTVISDKQRR-----LLAKDA 377
Query: 340 MISSYPTK-RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDR 398
MI+ K +PT +VV I RS W Y G + +SS +
Sbjct: 378 MIAQRSKKIQPTAKVVYIQRRS--------------WRQYVGQLAPSSVDPQSSST---- 419
Query: 399 EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHV 458
+ ++++ K LP ++ R ++ +V + ID W +P H
Sbjct: 420 ----------QNVFVILMDKCLP-KVRIRTRRAAELLDKRIVIS-IDSWPTTHKYPLGHF 467
Query: 459 LHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV------------PWEVPQEEL 506
+ G + + A+L E+ + FS + L CLP P V ++ L
Sbjct: 468 VRDLGTIESAQAETEALLLEHDVEYRPFSKKVLECLPAEGHDWKAPTKLDDPEAVSKDPL 527
Query: 507 LS-RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEA 565
L+ RKDLR+ I +IDP D+DDAL ++L +G VGVHIADV++FV PGTALD E
Sbjct: 528 LTKRKDLRDKLICSIDPPGCVDIDDALHAKKLPNGNWEVGVHIADVTHFVKPGTALDAEG 587
Query: 566 QVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIR 625
R TSVY++ ++I MLP+LL ++ SL P VDR AFS+ W+L+ + ++V+ ++VIR
Sbjct: 588 AARGTSVYLVDKRIDMLPMLLGTDLCSLKPYVDRFAFSVIWELDDSANIVNVNFMKSVIR 647
Query: 626 SCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKR 685
S SYE AQ ID K ++ L G +++L ++S LK KR
Sbjct: 648 SREAFSYEQAQLRIDDK---TQNDELTMG----------------MRALLKLSVKLKQKR 688
Query: 686 FTDGALRLENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPD 744
GAL L + + V + E P + + N L EEFMLLAN + A I AFP
Sbjct: 689 LEAGALNLASPEVKVHMDSETSDPNEVEIKKLLATNSLVEEFMLLANISVARKIYDAFPQ 748
Query: 745 SALLRRHPAP---NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDI 801
+A+LRRH AP N L E ++ + + SS SL++ + +D Y F+
Sbjct: 749 TAMLRRHAAPPSTNFEILNEM--LNTRKNMSISLESSKALADSLDRCVDP-EDPY--FNT 803
Query: 802 LIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
L+ +TR M A YF SG + D+ HY LA +YTHFTSP+RRY D+V HR L A+
Sbjct: 804 LVRIMSTRCMMAAQYFYSGAYS-YPDFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAI 862
Query: 861 EAEKLYWKHR-----RMLPKNNHREGVRGRF 886
E L HR M+ +N +R+ +F
Sbjct: 863 GYEPLSLTHRDKNKMDMICRNINRKHRNAQF 893
>gi|349581145|dbj|GAA26303.1| K7_Dis3p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392296310|gb|EIW07412.1| Dis3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1001
Score = 259 bits (661), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 232/751 (30%), Positives = 344/751 (45%), Gaps = 136/751 (18%)
Query: 160 FAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEGD 219
F ++S V L+ G ++ +++ +N LE + VLI G NRA GD
Sbjct: 255 FPEYYSTARVMGGLKNGVLYQGNIQISEYNFLEGSVSLPRFSKPVLIVGQKNLNRAFNGD 314
Query: 220 FVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCTLL 279
V++++ S W SSIV DS H D+ D+
Sbjct: 315 QVIVELLPQSEWKA------PSSIVLDSE--------HFDV---NDNPDI---------- 347
Query: 280 SEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSA 339
E G DDD ++E +S +T +S Q+ + A
Sbjct: 348 -EAG---DDDDNNE---------------------SSSNTTVISDKQRR-----LLAKDA 377
Query: 340 MISSYPTK-RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDR 398
MI+ K +PT +VV I RS W Y G + +SS +
Sbjct: 378 MIAQRSKKIQPTAKVVYIQRRS--------------WRQYVGQLAPSSVDPQSSST---- 419
Query: 399 EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHV 458
+ ++++ K LP ++ R ++ +V + ID W +P H
Sbjct: 420 ----------QNVFVILMDKCLP-KVRIRTRRAAELLDKRIVIS-IDSWPTTHKYPLGHF 467
Query: 459 LHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV------------PWEVPQEEL 506
+ G + + A+L E+ + FS + L CLP P V ++ L
Sbjct: 468 VRDLGTIESAQAETEALLLEHDVEYRPFSKKVLECLPAEGHDWKAPTKLDDPEAVSKDPL 527
Query: 507 LS-RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEA 565
L+ RKDLR+ I +IDP D+DDAL ++L +G VGVHIADV++FV PGTALD E
Sbjct: 528 LTKRKDLRDKLICSIDPPGCVDIDDALHAKKLPNGNWEVGVHIADVTHFVKPGTALDAEG 587
Query: 566 QVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIR 625
R TSVY++ ++I MLP+LL ++ SL P VDR AFS+ W+L+ + ++V+ ++VIR
Sbjct: 588 AARGTSVYLVDKRIDMLPMLLGTDLCSLKPYVDRFAFSVIWELDDSANIVNVNFMKSVIR 647
Query: 626 SCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKR 685
S SYE AQ ID K ++ L G +++L ++S LK KR
Sbjct: 648 SREAFSYEQAQLRIDDK---TQNDELTMG----------------MRALLKLSVKLKQKR 688
Query: 686 FTDGALRLENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPD 744
GAL L + + V + E P + + N L EEFMLLAN + A I AFP
Sbjct: 689 LEAGALNLASPEVKVHMDSETSDPNEVEIKKLLATNSLVEEFMLLANISVARKIYDAFPQ 748
Query: 745 SALLRRHPAP---NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDI 801
+A+LRRH AP N L E ++ + + SS SL++ + +D Y F+
Sbjct: 749 TAMLRRHAAPPSTNFEILNEM--LNTRKNMSISLESSKALADSLDRCVDP-EDPY--FNT 803
Query: 802 LIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
L+ +TR M A YF SG + D+ HY LA +YTHFTSP+RRY D+V HR L A+
Sbjct: 804 LVRIMSTRCMMAAQYFYSGAYS-YPDFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAI 862
Query: 861 EAEKLYWKHR-----RMLPKNNHREGVRGRF 886
E L HR M+ +N +R+ +F
Sbjct: 863 GYEPLSLTHRDKNKMDMICRNINRKHRNAQF 893
>gi|320041326|gb|EFW23259.1| exosome complex exonuclease [Coccidioides posadasii str. Silveira]
Length = 1044
Score = 259 bits (661), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 188/533 (35%), Positives = 271/533 (50%), Gaps = 74/533 (13%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGS-RKDAKKNRSSLSVPDREYIQLTPT 406
+PT RVV +I+R+ R+ VG N GGS +A R ++ + + P
Sbjct: 380 QPTARVVGVIKRNWRQ--YVG--------NIDGGSFSSEASSGRR------QQAVFVIPM 423
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG--- 463
+ PK+ + + + + +R + ID W+ +S +P H + G
Sbjct: 424 DKRVPKIKIRTRQASELLGQR------------ILITIDAWDRDSRYPTGHFVRSLGELE 471
Query: 464 -RGGEVEPQINAILYENAICCSGFSPESLSCLP--CVPWEVPQ--EELL--SRKDLRNFC 516
+G E E A+L E + FS L+CLP W+VP ++ L RKDLR+
Sbjct: 472 TKGAETE----ALLLEYDVQYRPFSQAVLNCLPPEGHSWKVPGNLDDPLWKDRKDLRDLL 527
Query: 517 IFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQ 576
+ +IDP D+DD L L +G VGVHIADVS+FV P A+DIEA +R T+VY++
Sbjct: 528 VCSIDPPGCQDIDDTLHSRPLPNGNFEVGVHIADVSHFVQPNNAMDIEASMRGTTVYLVD 587
Query: 577 RKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQ 636
++I MLP+LL ++ SL P V+R FS+ W++ ++V ++VI S SYE AQ
Sbjct: 588 KRIDMLPMLLGTDLCSLKPYVERFGFSVIWEMTPDAEIVSANFTKSVILSKEAFSYEQAQ 647
Query: 637 DIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENS 696
ID + + ++ +S+++L +SKIL+ KR GAL L +
Sbjct: 648 LRID-------------------DESKKDELTQSMRTLLRMSKILRQKRMDAGALNL--A 686
Query: 697 KPVFLFDEYGTPYDSVLSGRED----LNFLFEEFMLLANKTAAEVIARAFPDSALLRRHP 752
P + D V + N L EEFMLLAN T A I ++FP +ALLRRH
Sbjct: 687 SPEVRIETESELNDPVADVKTKALLATNSLVEEFMLLANITVASRIYQSFPQTALLRRHA 746
Query: 753 APNMRKLREFEAFCS-KHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPM 810
P + + A S K GL LD SSS SL++ + F+ LI ATR M
Sbjct: 747 TPPPQNFEQLIAQLSKKRGLTLDVSSSLALANSLDKC---VDPSNPFFNTLIRILATRCM 803
Query: 811 QLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE 863
A YFC+G ++++ HY LA +YTHFTSP+RRY DLVVHR L AA+ E
Sbjct: 804 TSAEYFCAGAHA-ESEFRHYGLASSIYTHFTSPIRRYADLVVHRQLAAAIGYE 855
Score = 43.9 bits (102), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
I+ ++SM + L G + ++ V+ +N LE ++ +LI G NRA+ G
Sbjct: 255 IYPEYYSMSKLMTGLRAGTLHQGIFNVSPYNYLEGSVQVAAFDKSLLILGRENSNRAIAG 314
Query: 219 DFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEAN 254
D V++++ W S ++ IV++ L + N
Sbjct: 315 DLVVVEILPKDQWK-----SPSTKIVDEEALTKDEN 345
>gi|423315862|ref|ZP_17293767.1| ribonuclease R [Bergeyella zoohelcum ATCC 43767]
gi|405585578|gb|EKB59402.1| ribonuclease R [Bergeyella zoohelcum ATCC 43767]
Length = 719
Score = 259 bits (661), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 158/431 (36%), Positives = 227/431 (52%), Gaps = 37/431 (8%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 499
V RI +W S P+ V+ V G GE E +I++IL E + S F E +
Sbjct: 194 VVVRIVDWKPHSKNPEGKVVQVLGAPGEHETEIHSILAEYGLPYS-FPEEVEQEADAINR 252
Query: 500 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 559
+ +EE+ R+D+R+ FTIDP A D DDALSI +L +G VGVHIADVS++V PGT
Sbjct: 253 NIDEEEVKKRRDMRDVLTFTIDPKDAKDFDDALSIRQLKNGNWEVGVHIADVSHYVTPGT 312
Query: 560 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 619
LD EA R+TS+Y++ R +PMLP +LS +V SL P D+ FS ++LN +++ +W
Sbjct: 313 LLDEEAYSRATSIYLVDRVVPMLPEVLSNDVCSLRPNEDKYTFSAVFELNDKAEIIKQWF 372
Query: 620 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 679
GRTVI S + +YE AQ+ I+ G+G D+ I L +++K
Sbjct: 373 GRTVIHSDRRFTYEEAQERIE----------TGKG-----------DLAEEILVLDKLAK 411
Query: 680 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 739
IL++ R GA+ + S+ F DE P +D N L EEFMLLAN+ +E I+
Sbjct: 412 ILREDRVKKGAITFDRSEVRFHLDENNEPVGVYFKTSKDANHLIEEFMLLANRKVSEYIS 471
Query: 740 RAFPDSA-----LLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 794
+ + R H P+ KL F + G +++ S+S + +S+ + +K
Sbjct: 472 INAKNEVTGLTFIYRVHDDPDPTKLEALRDFVATFGYKMNLSNSKKVAESMNNLLKSVKG 531
Query: 795 DYVLFDILINYATRPMQLASYFCSGDFKDDTD-WGHYALAFPVYTHFTSPLRRYPDLVVH 853
+++ A R M A Y TD GHY L F YTHFTSP+RRYPDL+ H
Sbjct: 532 KGEE-NMIETLAMRSMSKAVY--------STDPIGHYGLGFAYYTHFTSPIRRYPDLIAH 582
Query: 854 RTLNAALEAEK 864
R L L+ K
Sbjct: 583 RLLQHYLDKGK 593
>gi|443896905|dbj|GAC74248.1| exosomal 3'-5' exoribonuclease complex, subunit Rrp44/Dis3
[Pseudozyma antarctica T-34]
Length = 1006
Score = 259 bits (661), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 182/532 (34%), Positives = 265/532 (49%), Gaps = 65/532 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 407
+PTG+VV I+ R+ R V ++ N N S+LS + + TP
Sbjct: 389 QPTGKVVGIVRRNWR--SYVAHVDANSV-------------NSSALSSLGAQTVFATPVD 433
Query: 408 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 467
K P++ + + + + +++ LVA +D W S +P H + G+
Sbjct: 434 RKLPRIRIRTRQARELMGQKI----------LVA--LDAWRPVSRYPDGHFVRALGQAES 481
Query: 468 VEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEELLSRK-----DLRNFCIFTI 520
E + ++L E+ + FS L CLP W VP +++ R D+R+ I +I
Sbjct: 482 KEAEQESLLLEHDVPYRPFSKAILDCLPAEGDSWVVPPKDMTHRAWRDRVDMRDEIICSI 541
Query: 521 DPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIP 580
DP D+DDAL ++L +G + GVHIADVSYFV P +D EA R T+VY++ ++I
Sbjct: 542 DPPGCQDIDDALHAKQLPNGNIQAGVHIADVSYFVRPDNPMDAEAASRGTTVYLVDKRID 601
Query: 581 MLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIID 640
MLP LL + SL P V+RLAFS W++ ++V ++VI S +YE AQ
Sbjct: 602 MLPHLLGTNLCSLRPYVERLAFSAVWEMTPEAEIVSVRFHKSVIASKAAFTYEEAQ---- 657
Query: 641 GKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVF 700
+ D S N + +SI+ L ++K LK KR GAL L + +
Sbjct: 658 LRKDDASKNDA---------------ITKSIRLLNSLAKKLKQKRMDAGALNLASPEVRI 702
Query: 701 LFD--EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH---PAPN 755
D E P D + N L EEFMLLAN + AE I FP +A+LRRH P N
Sbjct: 703 HLDSPESAGPIDVEQKEMRETNSLVEEFMLLANVSVAERIYEVFPMTAVLRRHMPPPRTN 762
Query: 756 MRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLAS 814
L++ + G++LD SSSG SL++ + F+ L+ ATR M A
Sbjct: 763 FETLQDI--LLKRRGMELDVSSSGALAASLDKCVDPADG---TFNTLVRIMATRCMLSAE 817
Query: 815 YFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
YFCSG DT + HY LA +YTHFTSP+RRY D++ HR L A++ E L+
Sbjct: 818 YFCSGSVARDT-FSHYGLAAGMYTHFTSPIRRYADVLAHRQLAASINYEPLH 868
Score = 42.7 bits (99), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%)
Query: 150 SHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGI 209
S S+ R ++ H + ++ G + + N +N LEA + + +L+ G
Sbjct: 252 SGGSDKRAVLYPEHLPQNQLMAGIKSGQLLQGFFNANPYNYLEATVRAGTLTRPILLVGR 311
Query: 210 AAQNRAVEGDFVLIKV 225
A NRAV+GD V +++
Sbjct: 312 QAMNRAVDGDIVAVQM 327
>gi|363750039|ref|XP_003645237.1| hypothetical protein Ecym_2715 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888870|gb|AET38420.1| Hypothetical protein Ecym_2715 [Eremothecium cymbalariae
DBVPG#7215]
Length = 988
Score = 259 bits (661), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 217/747 (29%), Positives = 332/747 (44%), Gaps = 144/747 (19%)
Query: 148 NPSHQSEARCKI-FAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLI 206
N EAR + F +++ + L+ G ++ + +++ +N LE + VL+
Sbjct: 234 NIDEDQEARSEFNFPEYYTTSRIMGGLKNGSLYQGVIQISEYNFLEGSISLPNFSKPVLV 293
Query: 207 TGIAAQNRAVEGDFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSK 266
G NRA GD V++++ S W K S
Sbjct: 294 VGQKNLNRAFNGDLVVVELLAKSEW------------------------------KAPSS 323
Query: 267 VDVSYEYSNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQ 326
V + E+ N + DDDS A DS+ + S +
Sbjct: 324 VTLDSEHYNVNE------NPDDDSGGGA---------------------QDSSSVIISDK 356
Query: 327 QNDGMNAIERLSAMISSYPTKR--PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKG---G 381
Q + + I + TK+ PT R+V+I RS W Y G
Sbjct: 357 QRRLL-----IQDAIQAQKTKKIQPTARIVAITRRS--------------WRPYVGQIAS 397
Query: 382 SRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVA 441
S D + R+ + + + PK+ + + + + KR +
Sbjct: 398 SSVDLQNGRT-------QNVFVILMDKCLPKIRIRTRRAKELLNKR------------IV 438
Query: 442 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PW 499
+D W +P H + G + + ++L E+ + FS + L CLP W
Sbjct: 439 VSLDSWPATYRYPLGHFVRELGEIESAQAETESLLLEHDVEYRPFSKKVLECLPSEGHDW 498
Query: 500 EVP----------QEELLS-RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHI 548
+ P ++ LL+ R+D+R+ I +IDP D+DDAL ++L +G VGVHI
Sbjct: 499 KAPVDLQDADAIAKDPLLAKRRDMRDKLICSIDPPGCVDIDDALHAKKLINGNWEVGVHI 558
Query: 549 ADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDL 608
ADV++FV P TALD E R+TSVY++ ++I MLP+LL ++ SL VDR AFS+ W+L
Sbjct: 559 ADVTHFVKPNTALDAEGASRATSVYLVDKRIDMLPMLLGTDLCSLKASVDRFAFSVIWEL 618
Query: 609 NSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVV 668
++ ++V ++VIRS SYE AQ ID D ++ L G
Sbjct: 619 DNDANIVSVEFTKSVIRSREAFSYEQAQLRID---DPNQNDELTLG-------------- 661
Query: 669 RSIKSLYEVSKILKDKRFTDGALRLENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFM 727
+++L ++SK LK KR GAL L + + V + E P + + N L EEFM
Sbjct: 662 --MRALLQLSKKLKQKRLDAGALNLASPEVKVHMDSETSDPSEVEIKKLLSTNSLVEEFM 719
Query: 728 LLANKTAAEVIARAFPDSALLRRHPAP---NMRKLREFEAFCSKHGLQLDTSSSGQFHQS 784
LLAN + A I +FP +A+LRRH AP N L E + + + SS S
Sbjct: 720 LLANISVARKIYDSFPQTAMLRRHAAPPSTNFESLNEM--LQVRKNMSISLESSKALADS 777
Query: 785 LEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSP 843
L++ + D V F+ L+ +TR M A YF SG + +D+ HY LA +YTHFTSP
Sbjct: 778 LDRC---VDSDDVYFNTLVRIMSTRCMMAAQYFYSGAYS-YSDFRHYGLAVDIYTHFTSP 833
Query: 844 LRRYPDLVVHRTLNAALEAEKLYWKHR 870
+RRY D++ HR L AA+ E L HR
Sbjct: 834 IRRYCDIIAHRQLAAAIGYESLDLSHR 860
>gi|154340243|ref|XP_001566078.1| putative ribonuclease II-like protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063397|emb|CAM39576.1| putative ribonuclease II-like protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 929
Score = 259 bits (661), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 238/792 (30%), Positives = 377/792 (47%), Gaps = 115/792 (14%)
Query: 217 EGDFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTE---------ANGMHSDICKGKSKV 267
EG V+ +V+ + ++ N S V S LP + +HSD+ +
Sbjct: 22 EGTVVIGRVN------VFRNYTTNLSFVRSSRLPCDVVLNSAELRGPALHSDVVAVELLP 75
Query: 268 DVSYEYSNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQ 327
++ + + + D++S+A + +G H + + E ++ Q
Sbjct: 76 LTQWQLVPNAVSTASDL---GDNASDAKTDSGLRAMPSTLPDGRHIAQLIAPETTAAILQ 132
Query: 328 NDGMN---AIERLSAMISSYPT-KRPTGRVVSIIERS-PRRDGIVGFLNVNQWFNYKGGS 382
N A++ + +P+ KRP GRV+ I+ER PR V + NQ +G
Sbjct: 133 NASAEVSLAVQMGAPSSYEWPSEKRPLGRVIRILERHLPRLH--VARIADNQVQPGQG-- 188
Query: 383 RKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAA 442
+ + Y + P + YP++ V D+ + A I M L +
Sbjct: 189 ------------LRESYYYRFRPFNQLYPQLAVQGCDI-------MAPYHANIGMSLFSL 229
Query: 443 RIDEWNEESPFPQAHVLHVFGRGGEV----------EPQINAILYENAICCS------GF 486
+ + + +H R G V + A+ + +AIC S F
Sbjct: 230 ALQQGEKGD-------VHTAPRMGNVLLCKVHSFLGDASTMAVAH-HAICTSCNVPNEPF 281
Query: 487 SPESLSCLPCVPWEVPQEELLS---RKDLR-NFCIFTIDPSTATDLDDALSIERLSDGIS 542
S E+ +C+ + +P L+ R+DLR + + TIDP+TA DLDDALSI+ DG
Sbjct: 282 SEEAEACV-AKDFTIPSAAELADMGRRDLRESEFVLTIDPATARDLDDALSIKPRKDGGY 340
Query: 543 RVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAF 602
VGVHIADVSYFVLP TALD EAQ RS S Y++ R IPMLP LSE+ SLNPG D+ AF
Sbjct: 341 HVGVHIADVSYFVLPRTALDEEAQRRSNSTYLVDRVIPMLPSRLSEQYCSLNPGEDKFAF 400
Query: 603 SIFWDLNSAGDVVD--------RWIGRTVIRSCCKLSYEHAQDIIDG---KFDV-ESSNT 650
S ++ + G ++ W G++VIRS C+L+YE AQ I+D + DV +++
Sbjct: 401 SGLFEFDRDGHLISEAETGEKCEWFGQSVIRSRCRLAYEQAQKILDNDPVELDVAQAAFD 460
Query: 651 LGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD--EYGTP 708
LG + + + V +SIK+L++++ L+++ DG + + N + F F+ E +P
Sbjct: 461 LG-----ISEEAARNKVKQSIKNLFKLASKLREQSLRDGRVVIGNIRLGFHFEKNEVNSP 515
Query: 709 YDSVLSGRE-DLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCS 767
S ++ N+L EEFMLLAN+ A+ I + P+ ALLRRH PN RK+ S
Sbjct: 516 PVSFSVHQQIQANWLVEEFMLLANQRVAQKIVQFIPNGALLRRHKPPNPRKMDLLREALS 575
Query: 768 KHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDW 827
GL SS + + L+ + + D+ L+ Y+ +A+ + + D +
Sbjct: 576 SRGLPTCGSSGQELQRMLDIMMKDHQGDFYTVCELVKYSL----MAAEYIANDPTEKDIR 631
Query: 828 GHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFL 887
H+A+A P YTHFTSP+RRY DL+VHR L ALE E+ + + +P+ H V R
Sbjct: 632 SHFAVAAPWYTHFTSPIRRYCDLMVHRQLLVALELEQRIEEAQLAMPRAPHL-AVERRPE 690
Query: 888 TGIFYDKDAAE--SLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVK- 944
IF + +L+ RE P ++ L N+ H N+ +L R+ D ++
Sbjct: 691 DDIFDPTRVVDVSTLKTRELF--------YPHSE-LQNIVAHANECRLNSRSAGDMSLEY 741
Query: 945 ---LYMWILLKK 953
LY+ L K+
Sbjct: 742 SLCLYLLALQKR 753
>gi|328770432|gb|EGF80474.1| hypothetical protein BATDEDRAFT_30067 [Batrachochytrium
dendrobatidis JAM81]
Length = 942
Score = 259 bits (661), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 180/556 (32%), Positives = 271/556 (48%), Gaps = 54/556 (9%)
Query: 316 SDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQW 375
+D T + + + + + +L A T +PT RVV II+R+ W
Sbjct: 301 ADDTNQAVAVKTDSMILENNKLLASTEPESTAKPTARVVGIIKRN--------------W 346
Query: 376 FNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATI 435
+ G + + + + + PK+ + + + KR
Sbjct: 347 RPFCGTIESTTVQTAAESINTQMQSVFFWALDKRIPKIRIRTRQAQHLVGKR-------- 398
Query: 436 EMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP 495
+ +D W + S +P H + G G+ + +L E+ + + FSP L LP
Sbjct: 399 ----IVVAMDSWAKNSRYPSGHYVRTLGDVGDRATETEVLLLEHDVPYAPFSPLVLRFLP 454
Query: 496 --CVPWEVPQEELL-SRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVS 552
W V EE L R+D R + + +IDP TD+DDAL ++L +G VGVHIADVS
Sbjct: 455 EEGESWVVRDEEHLEGREDFRTWDVCSIDPPGCTDIDDALHAKQLPNGNYSVGVHIADVS 514
Query: 553 YFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAG 612
+FV P A+D+EA+ R T+VY++ ++I MLP LL + SL VDRLAFS W+++
Sbjct: 515 HFVKPDNAMDLEARRRGTTVYLVDKRIDMLPSLLGTNLCSLRSNVDRLAFSCLWEMSPLA 574
Query: 613 DVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIK 672
+V+ ++VIRS L+Y+ AQ +D DV+ ++ + G I+
Sbjct: 575 EVISVRFTKSVIRSKASLTYDEAQARLD---DVKMTDPVSTG----------------IR 615
Query: 673 SLYEVSKILKDKRFTDGALRLENSKPVF-LFDEYGTPYDSVLSGREDLNFLFEEFMLLAN 731
L ++K L+ KR GAL L + + F + ++ P D L +D N L EEFMLLAN
Sbjct: 616 ILNSLAKQLRAKRMAAGALTLASPEVRFKMQNDSQDPVDVELKELKDTNALVEEFMLLAN 675
Query: 732 KTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREK 791
A I +FP+ ++LRRHP P + ++LD ++S SL++A
Sbjct: 676 IYVARKIYDSFPECSMLRRHPKPPATNFEDLAKALEPLNIELDPTTSKTLGDSLDKAVVP 735
Query: 792 LKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDL 850
D Y F+ L+ TR M A YFCSG W HY L+ +YTHFTSP+RRY DL
Sbjct: 736 -TDPY--FNQLVRIMTTRCMMQAVYFCSGTVAQPDFW-HYGLSTDIYTHFTSPIRRYADL 791
Query: 851 VVHRTLNAALEAEKLY 866
VVHR L A + +K Y
Sbjct: 792 VVHRLLAACIGYDKTY 807
>gi|339252888|ref|XP_003371667.1| exosome complex exonuclease RRP44 [Trichinella spiralis]
gi|316968045|gb|EFV52388.1| exosome complex exonuclease RRP44 [Trichinella spiralis]
Length = 785
Score = 259 bits (661), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 201/588 (34%), Positives = 297/588 (50%), Gaps = 78/588 (13%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTG+VV I R+ R I G L + A SS + TP+
Sbjct: 135 PTGKVVGIWRRACR--PICGVL-------------EPASSTISSQRL-------FTPSDR 172
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ P++++ + + + +R + A ID W S +P H + G+ G+
Sbjct: 173 RLPRVLLDLSETAHLVDQR------------IVATIDCWPISSRYPIGHFVRELGKIGDR 220
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDL 528
+ + A+L E+ + FS L CLP PW + +++L R+DLR+ I ++DP TD+
Sbjct: 221 QTENAALLLEHDVPNRCFSKSVLDCLPETPWTITEKDLQEREDLRHLTICSVDPPGCTDI 280
Query: 529 DDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSE 588
DDAL +L++G VGVHIADVS+FV+P +ALD EA R T+VY++ ++I MLP LLS
Sbjct: 281 DDALHCVQLANGNFEVGVHIADVSHFVIPNSALDQEAANRGTTVYLVDQRIDMLPDLLSS 340
Query: 589 EVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESS 648
++ SL DR AFS+ W+L+ +V+ +++IRS L+Y AQ +D
Sbjct: 341 KLCSLLAENDRFAFSVIWELDRNANVLKCRFCKSIIRSSMALTYADAQSRLDD------- 393
Query: 649 NTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGT 707
P + V ++++L +SK+LK +R GAL L +++ F D E
Sbjct: 394 -------PNMNDA-----VTVTLRNLNNLSKLLKKRRLERGALTLASTEVRFDVDSETSD 441
Query: 708 PYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCS 767
P + + N + EEFMLLAN T AE I FP ALLRRHP P + S
Sbjct: 442 PIEVQAKQMFETNSMVEEFMLLANITVAEKIYTEFPQVALLRRHPPPPVSSYEPVVKAAS 501
Query: 768 KHGLQLDTSSSGQ-FHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTD 826
+ G +L G+ SL +A L+ + +L TR M A YFCSG +
Sbjct: 502 RLGFELIVDRGGKALADSLNKA--VLETNPYFNTMLRMLTTRCMTQAVYFCSGSVSKEL- 558
Query: 827 WGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL---YWKHRR--MLPKN-NHRE 880
+ H+ LA P+YTHFTSP+RRY DLVVHR L+AAL+ ++ RR +L +N N+R
Sbjct: 559 YLHFGLASPIYTHFTSPIRRYADLVVHRLLSAALDQSRIVPSMLDRRRLELLCQNLNYRH 618
Query: 881 GV---RGR----FLTGIFYDKDAAESLEG------REALSVAALKYGV 915
+ GR T +F+ K+ E LE R AL + KYG+
Sbjct: 619 RMAQYAGRASVSLNTHLFF-KNRLEQLEAYVLFVRRNALQLLIPKYGL 665
>gi|371775901|ref|ZP_09482223.1| ribonuclease R [Anaerophaga sp. HS1]
Length = 720
Score = 258 bits (660), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 178/576 (30%), Positives = 268/576 (46%), Gaps = 81/576 (14%)
Query: 298 EMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSII 357
EM +R G YI P D V+ S +N + P ++ G VV +I
Sbjct: 89 EMTQR-GAAYIV---PDEGDEDIFVAQSNLGHALNGDRVKVLRYARKPGRQAEGEVVEVI 144
Query: 358 ERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLV 417
ER+ RD VG L V++ F + D++ + +P
Sbjct: 145 ERN--RDHFVGILQVSKGFAFLVA---DSRVMHHDIFIP--------------------- 178
Query: 418 KDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILY 477
L++ + + +I EW +++ P V+ V G GE +++AIL
Sbjct: 179 ----------LDQLNGGKNGQKAVVQITEWPDKAKNPIGKVVDVLGEPGENNAEMHAILA 228
Query: 478 ENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERL 537
E + + ++ + +P E+ R+D R FTIDP A D DDALS+ +L
Sbjct: 229 EFNLPYK-YPENVVAAANKIKASIPNSEIKKRRDFRGVTTFTIDPVDAKDFDDALSVRKL 287
Query: 538 SDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGV 597
+G+ VGVHIADV+Y+V P + ++ EA R+TSVY++ R +PMLP LS E+ SL P
Sbjct: 288 DNGLWEVGVHIADVTYYVNPNSIIEKEAAKRATSVYLVDRVVPMLPERLSNELCSLRPDE 347
Query: 598 DRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQ 657
D+L FS+ + ++ ++D W+GRT+IRS + +YE AQ +I+ LG
Sbjct: 348 DKLCFSVVFQIDDNAKIIDSWVGRTIIRSIRRFTYEEAQQVIE--------TGLG----- 394
Query: 658 LYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGRE 717
D ++ L +++K L+ +RF+ G++ E + F D+ G P +
Sbjct: 395 --------DCKMELEVLNDLAKKLRAERFSKGSVDFERVEVKFELDDDGKPLSVTFKEPK 446
Query: 718 DLNFLFEEFMLLANKTAAEVIARAFPDSA-----------LLRRHPAPNMRKLREFEAFC 766
D N L EEFMLLANK AE+I + D A + R H P+ K F F
Sbjct: 447 DANKLIEEFMLLANKRVAEIIGKNELDKAPSHHNKTAKTFVYRIHDEPDPEKFETFSRFV 506
Query: 767 SKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTD 826
K GL+ SL + +K++ +I+ A R M A Y +
Sbjct: 507 RKFGLEAKPKGQETISHSLNRLLDKVQGQKHQ-NIVETLAIRTMSKAVYSTH-------N 558
Query: 827 WGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEA 862
GHY L F YTHFTSP+RRYPD++VHR L LE
Sbjct: 559 IGHYGLGFKYYTHFTSPIRRYPDMMVHRLLQRYLEG 594
>gi|193213033|ref|YP_001998986.1| ribonuclease R [Chlorobaculum parvum NCIB 8327]
gi|193086510|gb|ACF11786.1| ribonuclease R [Chlorobaculum parvum NCIB 8327]
Length = 798
Score = 258 bits (660), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 188/544 (34%), Positives = 273/544 (50%), Gaps = 84/544 (15%)
Query: 345 PTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLT 404
P +R G +V+++ R + IVG L ++NR L PD+ I
Sbjct: 201 PHQRCEGLIVNVVSR--KLTTIVGTLQ---------------RENRRFLLKPDQRKI--- 240
Query: 405 PTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGR 464
P++ + VKD K+ ++G + +L E+ + QA V+ + G+
Sbjct: 241 -----LPEIHISVKD-----AKKAKDGAKVLAGDL------EFLKNGTI-QARVIEILGQ 283
Query: 465 GGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPST 524
GE + +++AI I + F E L+ V E+ E+L R D+R+ +FTIDP
Sbjct: 284 AGESQVEVSAIARGLGIDET-FEQELLTFAEKVREEITDEDLKERLDIRDKDVFTIDPVD 342
Query: 525 ATDLDDALSIERLSDGIS-RVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
A D DDALSIE+L +G +VGVHIADVS++V +ALD EA+ R+TSVY++ R IPMLP
Sbjct: 343 AKDFDDALSIEKLGNGGGYKVGVHIADVSHYVPENSALDKEARKRATSVYLVDRVIPMLP 402
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKF 643
LSE+V SLNPGVDR+AFS+F+++ G+V +TVI S + +YE Q IID
Sbjct: 403 SRLSEKVCSLNPGVDRMAFSVFFNITKKGEVKKFEFHKTVIHSKRRFTYEDVQQIIDA-- 460
Query: 644 DVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD 703
G+G D V +++L +SK ++ +R G L E + F
Sbjct: 461 --------GKG-----------DYVEELQALESLSKTIRAQRMESGGLEFETEEVRFKLG 501
Query: 704 EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAF------PDSALLRRHPAPNMR 757
G P + + R D + L EEFMLLAN+T A + + P + R H AP M
Sbjct: 502 SNGEPVEVIKKERLDSHRLIEEFMLLANRTVAAYLTARYAENEKNPHPVIYRVHGAPQME 561
Query: 758 KLREFEAFCSKHGLQLDTSSSGQ-----FHQSLEQAREKLKDDYVLFDILIN-YATRPMQ 811
+++ F K G L G+ ++L + +K+ V F L+N R M
Sbjct: 562 RVQVLANFVRKIGFDLKLDRKGKDSATVSSRALRELLQKVHGTNVEF--LVNELVLRSMS 619
Query: 812 LASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRR 871
A Y S D GH+ L F YTHFTSP+RRYPDLV+HR L E E K R+
Sbjct: 620 KAVYMSSND-------GHFGLGFEHYTHFTSPIRRYPDLVIHRIL---FEYETTRKKRRK 669
Query: 872 MLPK 875
+ P+
Sbjct: 670 VTPE 673
>gi|408398915|gb|EKJ78041.1| hypothetical protein FPSE_01829 [Fusarium pseudograminearum CS3096]
Length = 983
Score = 258 bits (660), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 216/717 (30%), Positives = 328/717 (45%), Gaps = 123/717 (17%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
++ ++++ + ++ G + ++ V+ +N LE K+ +LI G NR+V+G
Sbjct: 249 LYPEYFTLSKMMTGVKAGLMHQGIFNVSPYNYLEGSIKVPSFPKPLLILGRENINRSVDG 308
Query: 219 DFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCTL 278
D V+++V W + ++ I+E+ + N + V+ S ++
Sbjct: 309 DLVVVEVLPEDQWKE-----PSTKIIEEDTITKNEN----------ADVEESQDF----- 348
Query: 279 LSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLS 338
+SEK ER+ E+V +Q++
Sbjct: 349 VSEK------------------ERKALQ-------------EQVKKTQKS---------- 367
Query: 339 AMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDR 398
+S +PT +VV +I+R+ R+ VG ++ + RK +
Sbjct: 368 ---ASESKPQPTAKVVGVIKRNWRQ--YVGHIDPSSASKASSQGRK-------------Q 409
Query: 399 EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHV 458
+ + L P K PK+ + + + D + KRL LV ID W +S P H
Sbjct: 410 DSVFLIPMDKKIPKIRLRSRQVADLLGKRL----------LVT--IDGWERDSRHPIGHF 457
Query: 459 LHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC------VPWEVPQEELLSRKDL 512
+ G + A+L E + F L CLP VP + R+DL
Sbjct: 458 VRSLGELETKSAETEALLLEWDVQYRPFPKTVLDCLPKEGHDWRVPTSMDDPGWRQREDL 517
Query: 513 RNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSV 572
R I +IDP D+DDAL ++L +G VGVHIADVS FV P A+D EA +R T+V
Sbjct: 518 RGLLICSIDPVGCQDIDDALHAKQLPNGNYEVGVHIADVSNFVKPANAMDTEASIRGTTV 577
Query: 573 YMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSY 632
Y++ ++I MLP LL ++ SL P V+R AFS+ W+LN D+V+ ++VI+S SY
Sbjct: 578 YLVDKRIDMLPPLLGTDLCSLKPYVERFAFSVLWELNDNADIVNVRFTKSVIKSREAFSY 637
Query: 633 EHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALR 692
E AQ ID + D+ + ++ L +SK LK KR GAL
Sbjct: 638 EQAQLRID-------------------DDSQQDDLTKGMRMLLMLSKKLKKKRMEAGALS 678
Query: 693 LENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH 751
L + + V E P D D N L EEFML AN + A I AFP +A+LRRH
Sbjct: 679 LSSPEVKVQTESETSDPIDVKTKQLLDTNSLVEEFMLFANISVAAKIYEAFPQTAILRRH 738
Query: 752 PAPNMRKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRP 809
AP E +K G++L T SS SL+Q + F+ L+ ATR
Sbjct: 739 GAPPKTNFDELSNQLRTKRGMELRTDSSKALADSLDQC---VDSKEPFFNTLVRIMATRC 795
Query: 810 MQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
M A YFCSG + ++ HY LA +YTHFTSP+RRY DL+ HR L AA++ E ++
Sbjct: 796 MMSAEYFCSGT-QAYPEFRHYGLASEIYTHFTSPIRRYADLLAHRQLAAAIDYEAIH 851
>gi|406672651|ref|ZP_11079876.1| ribonuclease R [Bergeyella zoohelcum CCUG 30536]
gi|405587195|gb|EKB60923.1| ribonuclease R [Bergeyella zoohelcum CCUG 30536]
Length = 719
Score = 258 bits (660), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 157/431 (36%), Positives = 227/431 (52%), Gaps = 37/431 (8%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 499
V RI +W S P+ V+ V G GE E +I++IL E + S F E +
Sbjct: 194 VVVRIVDWKPHSKNPEGKVVQVLGAPGEHETEIHSILAEYGLPYS-FPEEVEQEADAINR 252
Query: 500 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 559
+ +EE+ R+D+R+ FTIDP A D DDALSI +L +G +GVHIADVS++V PGT
Sbjct: 253 NIDEEEVKKRRDMRDVLTFTIDPKDAKDFDDALSIRQLKNGNWEIGVHIADVSHYVTPGT 312
Query: 560 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 619
LD EA R+TS+Y++ R +PMLP +LS +V SL P D+ FS ++LN +++ +W
Sbjct: 313 LLDEEAYSRATSIYLVDRVVPMLPEVLSNDVCSLRPNEDKYTFSAVFELNDKAEIIKQWF 372
Query: 620 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 679
GRTVI S + +YE AQ+ I+ G+G D+ I L +++K
Sbjct: 373 GRTVIHSDRRFTYEEAQERIE----------TGKG-----------DLAEEILVLDKLAK 411
Query: 680 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 739
IL++ R GA+ + S+ F DE P +D N L EEFMLLAN+ +E I+
Sbjct: 412 ILREDRVKKGAITFDRSEVRFHLDENNEPVGVYFKTSKDANHLIEEFMLLANRKVSEYIS 471
Query: 740 RAFPDSA-----LLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 794
+ + R H P+ KL F + G +++ S+S + +S+ + +K
Sbjct: 472 INAKNEVTGLTFIYRVHDDPDPTKLEALRDFVATFGYKMNLSNSKKVAESMNNLLKSVKG 531
Query: 795 DYVLFDILINYATRPMQLASYFCSGDFKDDTD-WGHYALAFPVYTHFTSPLRRYPDLVVH 853
+++ A R M A Y TD GHY L F YTHFTSP+RRYPDL+ H
Sbjct: 532 KGEE-NMIETLAMRSMSKAVY--------STDPIGHYGLGFAYYTHFTSPIRRYPDLIAH 582
Query: 854 RTLNAALEAEK 864
R L L+ K
Sbjct: 583 RLLQHYLDKGK 593
>gi|441669080|ref|XP_003274819.2| PREDICTED: DIS3-like exonuclease 2 [Nomascus leucogenys]
Length = 448
Score = 258 bits (660), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 149/374 (39%), Positives = 199/374 (53%), Gaps = 53/374 (14%)
Query: 581 MLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIID 640
MLP LL EE+ SLNP D+L FS+ W L G ++D W GRTVIRSC KLSYEHAQ +I+
Sbjct: 1 MLPRLLCEELCSLNPMSDKLTFSVIWTLTPEGKILDEWFGRTVIRSCTKLSYEHAQSMIE 60
Query: 641 GKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVF 700
+ + L P + + +V +++ +L+ ++K L+ +RF DGALRL+ K F
Sbjct: 61 SPNEKIPAKEL----PPISPEHSSEEVHQAVLNLHGIAKQLRQQRFVDGALRLDQLKLAF 116
Query: 701 LFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKL 759
D E G P + D N L EEFMLLAN A I RAFP+ ALLRRHP P R L
Sbjct: 117 TLDHETGLPQGCHIYEYRDSNKLVEEFMLLANMAVAHKIHRAFPEQALLRRHPPPQTRML 176
Query: 760 REFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSG 819
+ FC + GL +D SS+G ++SL Q K ++L N +RPMQ+A YFCSG
Sbjct: 177 NDLVEFCDQMGLPVDFSSAGALNKSLTQTFGDDKYSLARKEVLTNMCSRPMQMALYFCSG 236
Query: 820 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHR 879
+D + HYAL P+YTHFTSP+RR+ D++VHR L AAL
Sbjct: 237 LLRDPAQFRHYALNVPLYTHFTSPIRRFADVLVHRLLAAAL------------------- 277
Query: 880 EGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVK 939
G R R D A D L A HCNDR++A + V+
Sbjct: 278 -GYRERL--------DMA--------------------PDTLQKQADHCNDRRMASKRVQ 308
Query: 940 DACVKLYMWILLKK 953
+ L+ +L+K+
Sbjct: 309 ELSTSLFFAVLVKE 322
>gi|388855912|emb|CCF50487.1| probable DIS3 3`-5` exoribonuclease required for 3` end formation
of 5.8S rRNA [Ustilago hordei]
Length = 1022
Score = 258 bits (660), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 183/536 (34%), Positives = 265/536 (49%), Gaps = 61/536 (11%)
Query: 342 SSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYI 401
SS +PTG+VV I+ R+ R V ++VN N S+LS + +
Sbjct: 383 SSRGEPQPTGKVVGIVRRNWR--SYVAHVDVNSV-------------NSSALSSLGAQTV 427
Query: 402 QLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHV 461
TP K P++ + + D + +++ L+A +D W S +P H +
Sbjct: 428 FATPVDRKLPRIRIRTRQAKDLMGQKI----------LIA--LDSWRPTSRYPDGHFVRA 475
Query: 462 FGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEELLSRK-----DLRN 514
G+ + + ++L E+ + FS L CLP W VP +++ R D+R
Sbjct: 476 LGQAESKQAEQESLLLEHDVPYRPFSKAILDCLPPEGDSWVVPPKDMTHRAWKDRIDMRE 535
Query: 515 FCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYM 574
I +IDP D+DDAL ++L +G GVHIADVSYFV P +D EA R T+VY+
Sbjct: 536 EMICSIDPPGCQDIDDALHAKQLPNGNIEAGVHIADVSYFVRPDNPMDAEAASRGTTVYL 595
Query: 575 LQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEH 634
+ ++I MLP LL + SL P V+RLAFS W++ ++V+ ++VI S +YE
Sbjct: 596 VDKRIDMLPHLLGTNLCSLRPDVERLAFSAVWEMTPDAEIVNVRFHKSVIASKAAFTYEE 655
Query: 635 AQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLE 694
AQ D K ++ + SI+ L ++ LK KR GAL L
Sbjct: 656 AQFRKDDKSKKDA-------------------ITESIRLLNSLAIKLKQKRMDAGALNLA 696
Query: 695 NSKPVFLFD--EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHP 752
+ + D E P + + N L EEFMLLAN + A+ I FP +A+LRRH
Sbjct: 697 SPEVRIHLDSPEQAGPIEVEQKEMRETNSLVEEFMLLANVSVAQRIYEVFPMTAVLRRHL 756
Query: 753 APNMRKLREFEAFCSK-HGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPM 810
AP + K ++LD SSSG SL++ + KD F+ L+ ATR M
Sbjct: 757 APPRTNFENLQDILQKRRRMELDVSSSGALAASLDKCVDP-KDPP--FNTLVRIMATRCM 813
Query: 811 QLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
A YFCSG DT +GHY LA +YTHFTSP+RRY D++ HR L AA+ E L+
Sbjct: 814 LAAEYFCSGSVARDT-FGHYGLAAGMYTHFTSPIRRYADVLAHRQLAAAINYEPLH 868
Score = 47.4 bits (111), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 79/191 (41%), Gaps = 26/191 (13%)
Query: 35 NKNSSVNEIRGEATQTKNGYKTKNLTSSMNCSSTKQQDLDLHPLSEQDPTGASTVTFSSM 94
N++ S N+ A +T + +L +S +S+ + +LD+ +S+ D +
Sbjct: 163 NQDESPNDTNDRAIRTAAKWYRTHLMASTGPASSSKANLDVLLISD-DQDNVQRALKDDI 221
Query: 95 PTMHINEEESAESGSTQSQLLLATDLCGSIISRSCPEPIANDSSCWAYTNKDDNPSHQSE 154
M + + + Q LL+ SRS P + S SE
Sbjct: 222 RAMSLRDYIQGLDNADQLLDLLS--------SRSIP-----------------SASGGSE 256
Query: 155 ARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNR 214
R ++ H++ V ++ G + + N +N LEA + + +L+ G A NR
Sbjct: 257 KRAVLYPEHFAQNQVTAGIKSGQLLQGFFNANPYNYLEATVRSGQLTRPILLVGREAMNR 316
Query: 215 AVEGDFVLIKV 225
AV+GD V +++
Sbjct: 317 AVDGDVVAVQM 327
>gi|366998023|ref|XP_003683748.1| hypothetical protein TPHA_0A02320 [Tetrapisispora phaffii CBS 4417]
gi|357522043|emb|CCE61314.1| hypothetical protein TPHA_0A02320 [Tetrapisispora phaffii CBS 4417]
Length = 1015
Score = 258 bits (660), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 190/561 (33%), Positives = 277/561 (49%), Gaps = 78/561 (13%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PT +VV+I RS R+ VG + N GG++
Sbjct: 402 PTAKVVAITRRSWRQ--YVGQIAPNSVDKQVGGTQN------------------------ 435
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
V+L+ I+ R + + +V + +D W + +P H + G
Sbjct: 436 ---VFVILMDKCLPKIRIRTRRANELLNKRIVIS-VDSWPADHKYPLGHFVRDLGDVESS 491
Query: 469 EPQINAILYENAICCSGFSPESLSCLP------CVPWEV--PQEE-----LLSRKDLRNF 515
E + A+L E+ + FS + L CLP P + PQE+ L +R+DLR+
Sbjct: 492 EAETEALLLEHDVEYRPFSRKVLDCLPEEGHNWKAPTNINDPQEQAKDPLLKNRQDLRDK 551
Query: 516 CIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYML 575
I +IDP D+DDAL +RL +G VGVHIADV++FV PGTALD E R TSVY++
Sbjct: 552 LICSIDPPGCVDIDDALHAKRLPNGNWEVGVHIADVTHFVKPGTALDAEGASRGTSVYLV 611
Query: 576 QRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHA 635
++I MLP+LL ++ SL P VDR AFS+ W+L+ +++D ++VIRS SYE A
Sbjct: 612 DKRIDMLPMLLGTDLCSLKPYVDRFAFSVIWELDDNAEIIDVKFTKSVIRSREAFSYEQA 671
Query: 636 QDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLEN 695
Q ID K + ++ + +++L E+S LK KR GAL L +
Sbjct: 672 QLRIDDKNQTD-------------------ELTKGMRALLELSVKLKQKRLDAGALNLAS 712
Query: 696 SK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAP 754
+ V + E P + + N L EEFMLLAN + A I AFP +A+LRRH +P
Sbjct: 713 PEVKVHMDSETSDPNEVEIKKLLATNSLVEEFMLLANISVARKIFDAFPQTAMLRRHASP 772
Query: 755 ---NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPM 810
N L E + L + SS SL++ + KD Y F+ LI +TR M
Sbjct: 773 PSTNFAILNEM--LQKRKNLSISLESSKALADSLDRCIDP-KDPY--FNTLIRIMSTRCM 827
Query: 811 QLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR 870
A YF SG ++ +D+ HY LA +YTHFTSP+RR+ D++ HR L A+ E L HR
Sbjct: 828 MAAQYFYSGAYQ-YSDFRHYGLAVDIYTHFTSPIRRFCDVIAHRQLAGAIGYEPLALMHR 886
Query: 871 -----RMLPKNNHREGVRGRF 886
M+ KN +++ +F
Sbjct: 887 DKNKMEMICKNINKKHRNAQF 907
>gi|346320999|gb|EGX90599.1| mitotic control protein dis3 [Cordyceps militaris CM01]
Length = 985
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 188/534 (35%), Positives = 261/534 (48%), Gaps = 59/534 (11%)
Query: 342 SSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYI 401
SS +PT +VV II+R+ R+ VG ++ + RK + +
Sbjct: 370 SSESQAQPTAKVVGIIKRNWRQ--YVGHIDPSSASKGPSQGRK-------------LDSV 414
Query: 402 QLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHV 461
L P K PK+ + + + + + KRL LV ID W+ +S P H +
Sbjct: 415 FLIPMDKKIPKIRLRTRQVAELLGKRL----------LVT--IDAWDRDSRHPVGHFVRS 462
Query: 462 FGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEE----LLSRKDLRNF 515
G + A+L E + F L CLP W+VP R+DLR+
Sbjct: 463 LGELETKAAETEALLLEWDVQYRPFPKTVLDCLPTEGHDWQVPASTDDPGWRDREDLRDL 522
Query: 516 CIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYML 575
I +IDP D+DDAL +L +G VGVHIADVS+FV P A+D EA VR T+VY++
Sbjct: 523 LICSIDPVGCQDIDDALHARKLPNGNYEVGVHIADVSHFVKPANAMDSEASVRGTTVYLV 582
Query: 576 QRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHA 635
++I MLP LL + SL P V+R AFS+ W+L D+V ++VI+S SYE A
Sbjct: 583 DKRIDMLPPLLGTNLCSLKPYVERYAFSVLWELTDNADIVSARFTKSVIKSREAFSYEQA 642
Query: 636 QDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLEN 695
Q ID D + L +G +++L +S+ LK KR GAL L +
Sbjct: 643 QLRID---DAAQQDELTQG----------------MRALLALSRRLKKKRMDAGALSLSS 683
Query: 696 SK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAP 754
+ V + E P D D N L EEFML AN + A I AFP +A+LRRH AP
Sbjct: 684 PEVKVQMESETSDPIDVKTKELLDTNSLVEEFMLFANISVAAKIYEAFPQTAILRRHAAP 743
Query: 755 NMRKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQL 812
+ E K GL L T +S SL+ + + F+ L+ ATR M
Sbjct: 744 PKTNFDDLAEQLRVKRGLALRTDTSKALADSLDACVDPAEP---FFNTLVRIMATRCMMS 800
Query: 813 ASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
A YFCSG + ++ HY LA +YTHFTSP+RRY DL+ HR L AA+ E ++
Sbjct: 801 AEYFCSGT-QAYPEFRHYGLASEIYTHFTSPIRRYADLLAHRQLAAAIGYEAVH 853
>gi|46108604|ref|XP_381360.1| hypothetical protein FG01184.1 [Gibberella zeae PH-1]
Length = 983
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 215/717 (29%), Positives = 328/717 (45%), Gaps = 123/717 (17%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
++ ++++ + ++ G + ++ V+ +N LE K+ +LI G NR+V+G
Sbjct: 249 LYPEYFTLSKMMTGVKAGLMHQGIFNVSPYNYLEGSIKVPSFPKPLLILGRENINRSVDG 308
Query: 219 DFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCTL 278
D V+++V W + ++ I+E+ + N + V+ S ++
Sbjct: 309 DLVVVEVLPEDQWKE-----PSTKIIEEDTITKNEN----------ADVEESQDF----- 348
Query: 279 LSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLS 338
+SEK ER+ E+V +Q++
Sbjct: 349 VSEK------------------ERKALQ-------------EQVKKTQKS---------- 367
Query: 339 AMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDR 398
+S +PT +VV +++R+ R+ VG ++ + RK +
Sbjct: 368 ---ASESKPQPTAKVVGVVKRNWRQ--YVGHIDPSSASKASSQGRK-------------Q 409
Query: 399 EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHV 458
+ + L P K PK+ + + + D + KRL LV ID W +S P H
Sbjct: 410 DSVFLIPMDKKIPKIRLRSRQVADLLGKRL----------LVT--IDGWERDSRHPIGHF 457
Query: 459 LHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC------VPWEVPQEELLSRKDL 512
+ G + A+L E + F L CLP VP + R+DL
Sbjct: 458 VRSLGELETKSAETEALLLEWDVQYRPFPKTVLDCLPKEGHDWRVPTSMDDPGWRQREDL 517
Query: 513 RNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSV 572
R I +IDP D+DDAL ++L +G VGVHIADVS FV P A+D EA +R T+V
Sbjct: 518 RGLLICSIDPVGCQDIDDALHAKQLPNGNYEVGVHIADVSNFVKPANAMDTEASIRGTTV 577
Query: 573 YMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSY 632
Y++ ++I MLP LL ++ SL P V+R AFS+ W+LN D+V+ ++VI+S SY
Sbjct: 578 YLVDKRIDMLPPLLGTDLCSLKPYVERFAFSVLWELNDNADIVNVRFTKSVIKSREAFSY 637
Query: 633 EHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALR 692
E AQ ID + D+ + ++ L +SK LK KR GAL
Sbjct: 638 EQAQLRID-------------------DDSQQDDLTKGMRMLLMLSKKLKKKRMEAGALS 678
Query: 693 LENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH 751
L + + V E P D D N L EEFML AN + A I AFP +A+LRRH
Sbjct: 679 LSSPEVKVQTESETSDPIDVKTKQLLDTNSLVEEFMLFANISVAAKIYEAFPQTAILRRH 738
Query: 752 PAPNMRKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRP 809
AP E +K G++L T SS SL+Q + F+ L+ ATR
Sbjct: 739 GAPPKTNFDELSNQLRTKRGMELRTDSSKALADSLDQC---VDSKEPFFNTLVRIMATRC 795
Query: 810 MQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
M A YFCSG + ++ HY LA +YTHFTSP+RRY DL+ HR L AA++ E ++
Sbjct: 796 MMSAEYFCSGT-QAYPEFRHYGLASEIYTHFTSPIRRYADLLAHRQLAAAIDYEAIH 851
>gi|366992478|ref|XP_003676004.1| hypothetical protein NCAS_0D00590 [Naumovozyma castellii CBS 4309]
gi|342301870|emb|CCC69640.1| hypothetical protein NCAS_0D00590 [Naumovozyma castellii CBS 4309]
Length = 998
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 194/562 (34%), Positives = 278/562 (49%), Gaps = 78/562 (13%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 407
+PT RVV+I PRR W Y G P+ +Q T
Sbjct: 384 QPTARVVAI----PRR----------SWRQYVGQI------------APNSVDLQTGGTQ 417
Query: 408 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 467
+ ++++ K LP I+ R ++ +V + +D W +P H + G
Sbjct: 418 NVF--VILMDKCLP-KIRIRTRRAKELLDKRIVIS-VDSWPTTHKYPLGHFVRDLGGIET 473
Query: 468 VEPQINAILYENAICCSGFSPESLSCLPCV------------PWEVPQEELL-SRKDLRN 514
+ + A+L E+ + FS + L CLP P E+ ++ LL RKDLR+
Sbjct: 474 AQAETEALLLEHDVEYRPFSKKVLECLPAEGHEWKAPEVLTDPVEIAKDPLLVRRKDLRD 533
Query: 515 FCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYM 574
I +IDP D+DDAL +RL +G VGVHIADV++FV PGTALD E R TSVY+
Sbjct: 534 KLICSIDPPGCVDIDDALHAKRLPNGNWEVGVHIADVTHFVKPGTALDAEGASRGTSVYL 593
Query: 575 LQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEH 634
+ ++I MLP+LL ++ SL P VDR AFS+ W+L+ D+V+ ++VI+S SYE
Sbjct: 594 VDKRIDMLPMLLGTDLCSLKPYVDRFAFSVLWELDENADIVNVDFTKSVIKSREAFSYEQ 653
Query: 635 AQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLE 694
AQ ID D ++ L +G +++L ++S LK KR GAL L
Sbjct: 654 AQLRID---DASQTDDLTQG----------------MRALLQLSIKLKQKRLDAGALNLA 694
Query: 695 NSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPA 753
+ + V + E P + + N L EEFMLLAN + A I AFP +A+LRRH A
Sbjct: 695 SPEVKVHMDSETSDPGEVEIKKLLATNSLVEEFMLLANISVARKIYDAFPQTAMLRRHAA 754
Query: 754 P---NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRP 809
P N L E + + + SS SL++ E KD Y F+ L+ +TR
Sbjct: 755 PPSTNFELLNEM--LHQRKNMSISLESSKALADSLDRC-EDPKDPY--FNTLVRIMSTRC 809
Query: 810 MQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKH 869
M A YF SG + D+ HY LA +YTHFTSP+RR+ D+V HR L A+ E L H
Sbjct: 810 MMAAQYFYSGAYS-YPDFKHYGLAVDIYTHFTSPIRRFCDVVAHRQLAGAIGYEPLDLSH 868
Query: 870 R-----RMLPKNNHREGVRGRF 886
R M+ +N +R+ +F
Sbjct: 869 RDKNKMDMICRNINRKHRNAQF 890
>gi|333377320|ref|ZP_08469055.1| ribonuclease R [Dysgonomonas mossii DSM 22836]
gi|332884640|gb|EGK04897.1| ribonuclease R [Dysgonomonas mossii DSM 22836]
Length = 718
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 179/552 (32%), Positives = 268/552 (48%), Gaps = 85/552 (15%)
Query: 330 GMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKN 389
MN M++ + P G V+ I+ER ++ VG L+V + F
Sbjct: 120 AMNGDRVKIQMLAKRKGRDPEGEVLEILER--KQTTFVGTLDVQKQF------------- 164
Query: 390 RSSLSVPDREYIQLTPTHPKYPKMVVLVKDL--PDSIKKRLEEGDATIEMELVAARIDEW 447
+ V D + +L D+ P K +GD + +E+V EW
Sbjct: 165 --AFLVMDSK---------------ILANDIFIPKENLKGGNDGDKAL-VEIV-----EW 201
Query: 448 NEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC-VPWEVPQEEL 506
+++ P V+ + G+ GE ++NAIL E + PE + +P ++ EE+
Sbjct: 202 PQKAKNPIGKVIDILGKAGENNTEMNAILAEFGLPYK--YPEKVEAAANKIPDDISAEEI 259
Query: 507 LSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQ 566
R+D+RN FTIDP A D DDALSI++L +G VGVHIADV+++V G +D E +
Sbjct: 260 AKREDMRNTTTFTIDPRDAKDFDDALSIKQLKNGRWEVGVHIADVTHYVQEGDTIDKEGE 319
Query: 567 VRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRS 626
R+TS+Y++ R IPMLP LS + SL P D+L +S+ ++L+ ++ I RTVI S
Sbjct: 320 SRATSIYLVDRTIPMLPERLSNNLCSLRPHEDKLCYSVIFELDDEANIKKHRITRTVIHS 379
Query: 627 CCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRF 686
+ +YE AQDII+G EG D I L +++K L+ KRF
Sbjct: 380 DRRFTYEEAQDIIEG----------AEG-----------DFKEDILQLNDLAKKLRAKRF 418
Query: 687 TDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPD-- 744
DGA+ + + F DE G P +D N L EEFMLLANKT AE + +
Sbjct: 419 NDGAIAFDRHEVRFEIDEKGKPLSVYFKYAKDSNKLIEEFMLLANKTVAEFVGNVPKNKN 478
Query: 745 --SALLRRHPAPNMRKLREFEAFCSKHGLQL-----DTSSSGQFHQSLEQAREKLKDDYV 797
+ + R H PN K++ F + G ++ T+ S + L++ K ++
Sbjct: 479 AKTFVYRIHDIPNTEKMKNLSEFIRRFGYKIKVDGTKTNVSKAINHLLDEVSGKPEE--- 535
Query: 798 LFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLN 857
+++ A R M A Y + GHY LAF YTHFTSP+RRYPD++VHR L
Sbjct: 536 --NLISTIAIRAMAKAIYST-------VNIGHYGLAFEYYTHFTSPIRRYPDMMVHRLLT 586
Query: 858 AALEAEKLYWKH 869
L+ + KH
Sbjct: 587 RYLDGGRSVNKH 598
>gi|406884788|gb|EKD32133.1| hypothetical protein ACD_77C00174G0023 [uncultured bacterium]
Length = 705
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 185/586 (31%), Positives = 280/586 (47%), Gaps = 87/586 (14%)
Query: 290 SSSEAYNQEMIEREGYNYI--NGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTK 347
S E+ + + REGY +I G +K+ + D I R+S + TK
Sbjct: 38 SREESTGKVSMTREGYAFIIREGIEDDVFVPAQKLRGALHGD----IVRVSIVAKKSLTK 93
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNV--NQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTP 405
R G V+ I+ER+ R +G L + NQ +
Sbjct: 94 RYEGEVIEIVERTKR--PFIGILQITGNQAW----------------------------- 122
Query: 406 THPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
++ K++P IK +E + VAA +DEW + P H++ V G+
Sbjct: 123 -------VICENKNMPHDIKIPIEGVEDIYNGFKVAAIVDEWPRSAEEPIGHIIEVLGKP 175
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
GE +++AIL E + F P+ + ++ EE+ R+D R FTIDP+ A
Sbjct: 176 GENNTEMHAILTEFGLPFR-FDPKVEKEAEKISEKIDPEEIKRRRDFRGVTTFTIDPTDA 234
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
D DDALS+++L +G VGVHIADV+++V PGT ++ EA R+TSVY++ R +PMLP
Sbjct: 235 KDFDDALSLKKLDNGNWEVGVHIADVTHYVRPGTLVEQEALERATSVYLVDRTVPMLPEK 294
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS ++ SL P ++L FS ++LN ++ RW GRT+I S + YE AQ+ I+ K
Sbjct: 295 LSNKLCSLRPNEEKLCFSAVFELNEKAKIITRWFGRTIIESDYRFDYEEAQNTIETK--- 351
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEY 705
EG + I L++++ L+++RF+ GA+ E + DE
Sbjct: 352 -------EG-----------PLKNEILKLHQLASSLRNERFSKGAISFERPEMKVEVDEA 393
Query: 706 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSA--LLRRHPAPNMRKLREFE 763
G P +D N+L EEFMLLANK A + DS + R H PNM K+
Sbjct: 394 GKPIRVYQKESKDSNWLIEEFMLLANKEVAFFVGGKGRDSKTFVYRIHEEPNMDKVTILR 453
Query: 764 AFCSKHGLQLDTSS-----SGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCS 818
F G + + SG+ ++ L + + ++ + +I+ A R M A Y
Sbjct: 454 TFVKHFGYDMSPTKNARELSGEINKLLSTVKGRPEESAI--EIM---ALRSMARARYSTD 508
Query: 819 GDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
+ GHY LAF YTHFTSP+RRYPD++VHR L L+ K
Sbjct: 509 -------NAGHYGLAFDYYTHFTSPIRRYPDMMVHRLLALYLDNAK 547
>gi|151945609|gb|EDN63850.1| 3'-5'-exoribonuclease complex subunit [Saccharomyces cerevisiae
YJM789]
Length = 1001
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 233/751 (31%), Positives = 343/751 (45%), Gaps = 136/751 (18%)
Query: 160 FAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEGD 219
F ++S V L+ G ++ +++ +N LE + VLI G NRA GD
Sbjct: 255 FPEYYSTARVMGGLKNGVLYQGNIQISEYNFLEGSVSLPRFSKPVLIVGQKNLNRAFNGD 314
Query: 220 FVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCTLL 279
V++++ S W SSIV DS H D+ D+
Sbjct: 315 QVIVELLPQSEWKA------PSSIVLDSE--------HFDV---NDNPDI---------- 347
Query: 280 SEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSA 339
E G DDD ++E +S +T +S Q+ + A
Sbjct: 348 -EAG---DDDDNNE---------------------SSSNTTVISDKQRR-----LLAKDA 377
Query: 340 MISSYPTK-RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDR 398
MI+ K PT +VV I RS W Y G + +SS
Sbjct: 378 MIAQRSKKILPTAKVVYIQRRS--------------WRQYVGQLAPSSVDPQSS------ 417
Query: 399 EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHV 458
T + ++++ K LP ++ R ++ +V + ID W +P H
Sbjct: 418 ------STQSVF--VILMDKCLP-KVRIRTRRAAELLDKRIVIS-IDSWPTTHKYPLGHF 467
Query: 459 LHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV------------PWEVPQEEL 506
+ G + + A+L E+ + FS + L CLP P V ++ L
Sbjct: 468 VRDLGTIESAQAETEALLLEHDVEYRPFSKKVLECLPAEGHDWKAPTKLDDPEAVSKDPL 527
Query: 507 LS-RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEA 565
L+ RKDLR+ I +IDP D+DDAL ++L +G VGVHIADV++FV PGTALD E
Sbjct: 528 LTKRKDLRDKLICSIDPPGCVDIDDALHAKKLPNGNWEVGVHIADVTHFVKPGTALDAEG 587
Query: 566 QVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIR 625
R TSVY++ ++I MLP+LL ++ SL P VDR AFS+ W+L+ + ++V+ ++VIR
Sbjct: 588 AARGTSVYLVDKRIDMLPMLLGTDLCSLKPYVDRFAFSVIWELDDSANIVNVNFMKSVIR 647
Query: 626 SCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKR 685
S SYE AQ ID K ++ L G +++L ++S LK KR
Sbjct: 648 SREAFSYEQAQLRIDDK---TQNDELTMG----------------MRALLKLSVKLKQKR 688
Query: 686 FTDGALRLENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPD 744
GAL L + + V + E P + + N L EEFMLLAN + A I AFP
Sbjct: 689 LEAGALNLASPEVKVHMDSETSDPNEVEIKKLLATNSLVEEFMLLANISVARKIYDAFPQ 748
Query: 745 SALLRRHPAP---NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDI 801
+A+LRRH AP N L E ++ + + SS SL++ + +D Y F+
Sbjct: 749 TAMLRRHAAPPSTNFEILNEM--LNTRKNMSISLESSKALADSLDRCVDP-EDPY--FNT 803
Query: 802 LIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
L+ +TR M A YF SG + D+ HY LA +YTHFTSP+RRY D+V HR L A+
Sbjct: 804 LVRIMSTRCMMAAQYFYSGAYS-YPDFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAI 862
Query: 861 EAEKLYWKHR-----RMLPKNNHREGVRGRF 886
E L HR M+ +N +R+ +F
Sbjct: 863 GYEPLSLTHRDKNKMDMICRNINRKHRNAQF 893
>gi|50303069|ref|XP_451472.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640603|emb|CAH03060.1| KLLA0A10835p [Kluyveromyces lactis]
Length = 1008
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 192/557 (34%), Positives = 271/557 (48%), Gaps = 84/557 (15%)
Query: 338 SAMISSYPTK-RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVP 396
SA+++ K +PT RVV I RS W Y G
Sbjct: 384 SAILAQKSNKVQPTARVVGITRRS--------------WRQYVG---------------- 413
Query: 397 DREYIQLTPTH--PKYPK----MVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEE 450
Q+TPT P+ V+L+ I+ R + +V + +D W E
Sbjct: 414 -----QITPTSVDPQSSGTQNVFVILMDKCLPKIRIRTRLAKQLLNKRIVIS-VDCWPEN 467
Query: 451 SPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP--CVPWEVPQEE--- 505
+P H + G + + A+L E+ + FS + L CLP W+ P++
Sbjct: 468 YRYPLGHFVRDLGDIESAQAETEALLLEHDVEYRPFSKKVLDCLPKEGHDWKAPEDLTDP 527
Query: 506 --------LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLP 557
L SRKD R+ I +IDP D+DDAL ++L +G VGVHIADV++FV P
Sbjct: 528 EAIRNDPLLPSRKDFRDKLICSIDPPGCVDIDDALHAKQLPNGNWEVGVHIADVTHFVKP 587
Query: 558 GTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR 617
GTALD E R TSVY++ ++I MLP+LL ++ SL P VDR AFS+ W+L++ ++V
Sbjct: 588 GTALDAEGASRGTSVYLVDKRIDMLPMLLGTDLCSLKPYVDRFAFSVVWELDNDANIVGV 647
Query: 618 WIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEV 677
++VIRS SYE AQ+ ID + + TLG +++L ++
Sbjct: 648 DFTKSVIRSREAFSYEKAQNRIDDE-TAKDELTLG------------------MRALLQL 688
Query: 678 SKILKDKRFTDGALRLENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 736
SK LK KR GAL L + + V + E P + + D N L EEFMLLAN + A
Sbjct: 689 SKKLKQKRLDAGALNLASPEVKVHMDSETSDPNEVEIKKLLDTNSLVEEFMLLANISVAR 748
Query: 737 VIARAFPDSALLRRHPAP---NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLK 793
I AFP +A+LRRH AP N L E + G+ + SS SL++ +
Sbjct: 749 KIYEAFPQTAMLRRHAAPPSTNFELLNEM--LQVRKGMSISLESSKALADSLDRCED--P 804
Query: 794 DDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVH 853
+D L ++ +TR M A YF +G F D+ HY LA +YTHFTSP+RRY D+V H
Sbjct: 805 NDSYLNTLIRIMSTRCMMAAQYFHAGAFS-YADFRHYGLAVDIYTHFTSPIRRYCDVVAH 863
Query: 854 RTLNAALEAEKLYWKHR 870
R L A+ E L HR
Sbjct: 864 RQLAGAIGYEALDLSHR 880
>gi|401840176|gb|EJT43082.1| DIS3-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 1030
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 232/752 (30%), Positives = 340/752 (45%), Gaps = 136/752 (18%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
+F ++S V L+ G ++ +++ +N LE + VLI G NRA G
Sbjct: 283 MFPEYYSTARVMGGLKNGVLYQGTIQISEYNFLEGSLSLPRFSKPVLIVGQKNLNRAFNG 342
Query: 219 DFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCTL 278
D V++++ S W SSIV DS H D+ +
Sbjct: 343 DQVIVELLPQSEWKA------PSSIVLDSE--------HFDVNDNPN------------- 375
Query: 279 LSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLS 338
E G DDD ++E S +T +S Q+ +
Sbjct: 376 -IEAG---DDDENNE---------------------VSSNTTIISDKQRR-----LLARD 405
Query: 339 AMISSYPTK-RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPD 397
AMI+ K +PT +VV I RS W Y G P
Sbjct: 406 AMIAQRSKKIQPTAKVVYIQRRS--------------WRQYVGQL------------APS 439
Query: 398 REYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAH 457
Q + T + ++++ K LP ++ R ++ +V + ID W +P H
Sbjct: 440 SVDSQSSSTQNVF--VILMDKCLP-KVRIRTRRAAELVDKRVVIS-IDSWPATHKYPLGH 495
Query: 458 VLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVP----------QEE 505
+ G + + A+L E+ + FS L CLP W+ P ++
Sbjct: 496 FVRDLGTIESAQAETEALLLEHDVEYRPFSKNVLECLPAEGHDWKAPTKLDDMEAIAKDP 555
Query: 506 LLS-RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIE 564
LL+ RKDLR+ I +IDP D+DDAL +L +G VGVHIADV++FV P TALD E
Sbjct: 556 LLTKRKDLRDKVICSIDPPGCVDIDDALHARKLPNGNWEVGVHIADVTHFVKPSTALDAE 615
Query: 565 AQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVI 624
R TSVY++ ++I MLP+LL ++ SL P VDR AFS+ W+L+ D+V+ ++VI
Sbjct: 616 GAARGTSVYLVDKRIDMLPMLLGTDLCSLKPYVDRFAFSVMWELDDNADIVNVEFMKSVI 675
Query: 625 RSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDK 684
+S SYE AQ ID K + + TLG +++L ++S LK K
Sbjct: 676 KSREAFSYEQAQLRIDDK-NQDDELTLG------------------MRALLKLSIKLKQK 716
Query: 685 RFTDGALRLENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFP 743
R GAL L + + V + E P + + N L EEFMLLAN + A I AFP
Sbjct: 717 RLEAGALNLASPEVKVHMDSETSDPNEVEIKKLLATNSLVEEFMLLANISVARKIYDAFP 776
Query: 744 DSALLRRHPAP---NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFD 800
+A+LRRH AP N L E ++ + + SS SL++ + +D Y F+
Sbjct: 777 QTAMLRRHAAPPSTNFETLNEM--LNTRKNMSISLESSKALADSLDRCVDS-EDPY--FN 831
Query: 801 ILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAA 859
L+ +TR M A YF SG + D+ HY LA +YTHFTSP+RRY D+V HR L A
Sbjct: 832 TLVRIMSTRCMMAAQYFYSGAYS-YPDFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGA 890
Query: 860 LEAEKLYWKHR-----RMLPKNNHREGVRGRF 886
+ E L HR M+ +N +R+ +F
Sbjct: 891 IGYEPLSLAHRDKNKMDMICRNINRKHRNAQF 922
>gi|341884100|gb|EGT40035.1| hypothetical protein CAEBREN_08001 [Caenorhabditis brenneri]
Length = 956
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 163/446 (36%), Positives = 236/446 (52%), Gaps = 27/446 (6%)
Query: 424 IKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICC 483
I+ E+ + + +V A ID W +S +P H + G G E + +L E+ I
Sbjct: 389 IRIETEQAEILSQQRIVVA-IDHWPRDSKYPLGHYVRSIGEMGSRETENEVLLLEHDIPH 447
Query: 484 SGFSPESLSCLPCVPWEVPQEE---LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDG 540
+ FS L CLP WE E L R DLR+ I ++DP TD+DDAL +++ D
Sbjct: 448 APFSEAVLDCLPREEWEPDLSENRGPLPRVDLRHLTICSVDPLGCTDIDDALHCKQIGDD 507
Query: 541 ISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRL 600
+ VGVHIADV++FV PGTA+D EA +R T+VY+ R+I MLP LLS + SL +R
Sbjct: 508 LFEVGVHIADVTHFVRPGTAIDDEAALRGTTVYLCDRRIDMLPCLLSSNLCSLRGEEERY 567
Query: 601 AFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYG 660
AFS W + S+ D+ +++I+S L+YE AQ+IID P+
Sbjct: 568 AFSCIWTMTSSADIQSVKYHKSLIKSKAALTYEKAQEIIDD--------------PK--- 610
Query: 661 QFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDL 719
E DV + ++ L ++SK+L +R +GAL L +S+ F D E TP + D
Sbjct: 611 --ETDDVAQGLRGLMKLSKVLNARRTGNGALTLASSEVRFDMDWESRTPKKVMEKQHLDT 668
Query: 720 NFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSG 779
+ + EEFMLLAN + AE I + +PD ALLRRHP P + G ++ S
Sbjct: 669 HSMVEEFMLLANISVAEKILQEYPDCALLRRHPVPLKESYKPLIEAARHRGFEIIVESGK 728
Query: 780 QFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTH 839
SL + + + +L +L TR M A YF +G + H+ LA +YTH
Sbjct: 729 GLADSLNRCVD--TKNPMLNRLLRMLTTRCMTQAVYFSAGTVP-VPQYQHFGLACAIYTH 785
Query: 840 FTSPLRRYPDLVVHRTLNAALEAEKL 865
FTSP+RRY D++VHR L AA+ A+ +
Sbjct: 786 FTSPIRRYADVIVHRLLAAAIGADDI 811
>gi|385304885|gb|EIF48887.1| exosome complex exonuclease rrp44 [Dekkera bruxellensis AWRI1499]
Length = 568
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 170/443 (38%), Positives = 239/443 (53%), Gaps = 38/443 (8%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP--CV 497
+ +D W+E S FPQ H + G + + + AIL E+ I FS L CLP
Sbjct: 23 IVVAVDSWSESSKFPQGHYVRTLGDIEDKDAEEEAILLEHDIEYRPFSKNVLDCLPKEGH 82
Query: 498 PWEVPQ-----EELLS-RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADV 551
W+VP+ ++LL+ R+DLR+ I +IDP D+DDAL ++L +G VGVHIADV
Sbjct: 83 NWKVPENLNNGDQLLAKREDLRDRLICSIDPPGCVDIDDALHAKKLXNGNYEVGVHIADV 142
Query: 552 SYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSA 611
++FV PGTA+D EA R T+VY++ ++I MLP LL ++ SL VDR AFS+ W++N
Sbjct: 143 THFVKPGTAIDQEAASRGTTVYLVDKRIDMLPSLLGTDLCSLMANVDRYAFSVIWEMNDK 202
Query: 612 GDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSI 671
++ + +++IRS SYE AQ +D D E + L + +
Sbjct: 203 AEIQNVKFTKSIIRSRHAFSYEEAQMRMD---DQEKQDPLTQ----------------DL 243
Query: 672 KSLYEVSKILKDKRFTDGALRLENSKP-VFLFDEYGTPYDSVLSGREDLNFLFEEFMLLA 730
+ L +SKILK KR GAL L + + V + E P + + + N L EEFML A
Sbjct: 244 RILLRLSKILKKKRLDAGALNLASPEVRVHMDSETSDPSEVEVKQLLEANSLVEEFMLAA 303
Query: 731 NKTAAEVIARAFPDSALLRRH---PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQ 787
N + A I FP A+LRRH PA N L + + G+ L SS SL++
Sbjct: 304 NISVARKIYETFPQVAMLRRHATPPATNFEALNDM--LRVRKGMSLSVESSKALADSLDR 361
Query: 788 AREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRR 846
+ KD Y F+ L+ ATR M A YF +G F ++ HY LA +YTHFTSP+RR
Sbjct: 362 CVDP-KDPY--FNTLVRILATRCMTAAEYFTAGSFS-YPEFHHYGLAVDIYTHFTSPIRR 417
Query: 847 YPDLVVHRTLNAALEAEKLYWKH 869
Y D +VHR L+AA+ E L H
Sbjct: 418 YCDDIVHRQLSAAINYETLSKLH 440
>gi|383449353|ref|YP_005356074.1| Ribonuclease R [Flavobacterium indicum GPTSA100-9]
gi|380500975|emb|CCG52017.1| Ribonuclease R [Flavobacterium indicum GPTSA100-9]
Length = 725
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 176/522 (33%), Positives = 261/522 (50%), Gaps = 56/522 (10%)
Query: 346 TKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTP 405
++RP VV I+ER+ ++ VG ++V + F + +T
Sbjct: 130 SRRPEAEVVEILERA--KNEFVGVIDVQKNFAF------------------------VTT 163
Query: 406 THPK-YPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGR 464
+ K Y + + D+ ++ + G E+V R+ +W +++ P V+ V G+
Sbjct: 164 ANAKMYTDIFIPKNDIGEA-----QHG------EVVLVRMTDWPKKADSPFGKVVKVLGK 212
Query: 465 GGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPST 524
GE +I+AIL E + F E + + + EE+ R+DLRN FTIDP
Sbjct: 213 PGEHNTEIHAILAEYGLPYD-FPIEVEAFANKIDTSITVEEIAKRRDLRNVLTFTIDPKD 271
Query: 525 ATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPV 584
A D DDALS + L +G +GVHIADVS++V GT LD EA R+TSVY++ R +PMLP
Sbjct: 272 AKDFDDALSFQVLENGNYEIGVHIADVSHYVKEGTILDDEAYHRATSVYLVDRVVPMLPE 331
Query: 585 LLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFD 644
+LS SL P ++ FS + LN +V+D W GRTVI S + +YE AQ+II+ K D
Sbjct: 332 VLSNFACSLRPHEEKYTFSAVFQLNEKAEVLDSWFGRTVIYSDQRFAYEEAQEIIETKSD 391
Query: 645 VESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDE 704
+ ++ G Q + +V + L E++K L+ KR GA+ + + F +E
Sbjct: 392 IIPAHISLTG-EQYHAP---KPIVEATLKLDELAKKLRSKRMAAGAISFDKVEVKFNLNE 447
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P +D N L EEFMLLAN+ AE I + + + R H PN KL ++
Sbjct: 448 NAEPVGVFFKQSKDANHLIEEFMLLANRKVAEFIGKQ-KKTFVYRIHDEPNEDKLMSLQS 506
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKL--KDDYVLFDILINYATRPMQLASYFCSGDFK 822
SK G ++ S SL E + K + + D L A R M A+Y
Sbjct: 507 VISKFGYSINFKSKATISSSLNTLLEDVQGKKEQNMVDTL---AIRCMSKAAY------- 556
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
+ GHY LAF Y+HFTSP+RRYPD++ HR L L+ K
Sbjct: 557 STQNIGHYGLAFDYYSHFTSPIRRYPDVMAHRLLQYYLDGGK 598
>gi|145219389|ref|YP_001130098.1| RNAse R [Chlorobium phaeovibrioides DSM 265]
gi|145205553|gb|ABP36596.1| RNAse R [Chlorobium phaeovibrioides DSM 265]
Length = 794
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 185/544 (34%), Positives = 269/544 (49%), Gaps = 84/544 (15%)
Query: 343 SYPTKRPTGRVVSIIERSPRRDGIVGFL-NVNQWFNYKGGSRKDAKKNRSSLSVPDREYI 401
S P +R G + +II R R IVG L N+ FN K RK
Sbjct: 197 STPHQRCEGLITNIINR--RITTIVGTLVRANRRFNLKADERK----------------- 237
Query: 402 QLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHV 461
P++++ +K+ + ++G + EL ++++E QA VL +
Sbjct: 238 -------ILPEIIISIKN-----SAKAKDGQKVLVGEL------DFSKEGTI-QAKVLEI 278
Query: 462 FGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTID 521
G G+ +++AI I + F E + + V ++L R D+R+ +FTID
Sbjct: 279 LGTAGDSAVEVSAIARSKGIDET-FEKEIIKAAETIKMGVTDKDLKERLDIRDKVLFTID 337
Query: 522 PSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPM 581
P A D DDALS+E L DG R+GVHIADVS++V +ALD EA RSTSVY++ R IPM
Sbjct: 338 PVDAKDFDDALSVESLGDGNWRIGVHIADVSHYVPEDSALDKEALKRSTSVYLVDRVIPM 397
Query: 582 LPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDG 641
LP LSE++ SLNPGVDR+AFS+F+ +N G V + +TVI S + +YE QDI++
Sbjct: 398 LPSRLSEDICSLNPGVDRMAFSVFFTMNEKGKVSKQEFHKTVIHSKRRFTYEDVQDILNN 457
Query: 642 KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFL 701
G+G D + ++ L ++S +L+++RF G L E + F
Sbjct: 458 ----------GKG-----------DYLMELQLLEKISVLLREERFRHGGLDFETEEVRFR 496
Query: 702 FDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAF------PDSALLRRHPAPN 755
G P + + R + L EEFMLLAN+ AE + + F P + R H +P
Sbjct: 497 LGSKGEPLEVMKKERLGSHRLIEEFMLLANRKVAEHLTKTFKDGKKEPQPVIYRVHGSPQ 556
Query: 756 MRKLREFEAFCSKHG--LQLDTSSSGQF--HQSLEQAREKLKDDYVLFDILIN-YATRPM 810
++ F K G L+L+ G ++L + +K++ V F L+N R M
Sbjct: 557 QERVTILANFVKKMGYELKLNKGKDGPIVSAKALRELLQKVRGSNVEF--LVNELVLRCM 614
Query: 811 QLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR 870
A Y D GHY L F YTHFTSP+RRYPDL+VHR L E E K R
Sbjct: 615 SKAVYTGEND-------GHYGLGFDHYTHFTSPIRRYPDLIVHRML---FEYEAFRKKRR 664
Query: 871 RMLP 874
++ P
Sbjct: 665 KITP 668
>gi|401623683|gb|EJS41773.1| dis3p [Saccharomyces arboricola H-6]
Length = 1001
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 234/751 (31%), Positives = 342/751 (45%), Gaps = 136/751 (18%)
Query: 160 FAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEGD 219
F ++S V L+ G ++ +++ +N LE + VLI G NRA GD
Sbjct: 255 FPEYYSTARVMGGLKNGVLYQCNIQISEYNFLEGSVSLPRFSKPVLIVGQKNLNRAFNGD 314
Query: 220 FVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCTLL 279
V++++ S W SSIV DS H D+ D+
Sbjct: 315 QVIVELLPQSEWKA------PSSIVLDSE--------HFDV---NDNPDI---------- 347
Query: 280 SEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSA 339
E G DDD +EA S +T +S Q+ + A
Sbjct: 348 -EAG---DDDDGNEA---------------------SSNTTIISDKQRR-----LLAKDA 377
Query: 340 MISSYPTK-RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDR 398
+I+ K +PT +VV I RS W Y G P
Sbjct: 378 IIAQRSKKVQPTAKVVYIQRRS--------------WRQYVGQL------------APSS 411
Query: 399 EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHV 458
+Q + T + ++++ K LP I+ + I+ +V + ID W +P H
Sbjct: 412 VDLQSSSTQSVF--VILMDKCLP-KIRIKTRRAAELIDKRIVIS-IDSWPTTHKYPLGHF 467
Query: 459 LHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV------------PWEVPQEEL 506
+ G + + A+L E+ + FS + L CLP P V ++ L
Sbjct: 468 VRDLGTVESAQAETEALLLEHDVEYRPFSNKVLECLPAEGHDWKAPTKLDDPEAVAKDAL 527
Query: 507 LS-RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEA 565
L+ RKDLR+ I +IDP D+DDAL ++L +G VGVHIADV++FV PGTALD E
Sbjct: 528 LTKRKDLRDKQICSIDPPGCVDIDDALHAKKLPNGNWEVGVHIADVTHFVKPGTALDAEG 587
Query: 566 QVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIR 625
R TSVY++ ++I MLP+LL ++ SL P VDR AFS+ W+L+ ++V+ ++VI+
Sbjct: 588 AARGTSVYLVDKRIDMLPMLLGTDLCSLKPYVDRFAFSVIWELDDDANIVNVSFMKSVIK 647
Query: 626 SCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKR 685
S SYE AQ ID K + TLG +++L ++S LK KR
Sbjct: 648 SREAFSYEQAQFRIDDK-NQNDELTLG------------------MRALLKLSIKLKQKR 688
Query: 686 FTDGALRLENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPD 744
GAL L + + V + E P + + N L EEFMLLAN + A I AFP
Sbjct: 689 LEAGALNLASPEVKVHMDSETSDPNEVEIKKLLATNSLVEEFMLLANISVARKIYDAFPQ 748
Query: 745 SALLRRHPAP---NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDI 801
+A+LRRH AP N L E ++ + + SS SL++ + +D Y F+
Sbjct: 749 TAMLRRHAAPPSTNFEVLNEM--LNTRKNMSISLESSKALADSLDRCVDP-EDPY--FNT 803
Query: 802 LIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
L+ +TR M A YF SG + D+ HY LA +YTHFTSP+RRY D+V HR L A+
Sbjct: 804 LVRIMSTRCMMAAQYFYSGAYS-YPDFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAI 862
Query: 861 EAEKLYWKHR-----RMLPKNNHREGVRGRF 886
E L HR M+ +N +R+ +F
Sbjct: 863 GYEPLSLTHRDKNKMDMICRNINRKHRNAQF 893
>gi|326334664|ref|ZP_08200871.1| ribonuclease R [Capnocytophaga sp. oral taxon 338 str. F0234]
gi|325693114|gb|EGD35046.1| ribonuclease R [Capnocytophaga sp. oral taxon 338 str. F0234]
Length = 685
Score = 258 bits (658), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 160/435 (36%), Positives = 229/435 (52%), Gaps = 26/435 (5%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 499
V RI +W + P + + G+ GE +++AIL E + F E +
Sbjct: 141 VLVRITQWTSRANSPYGVIEKILGKPGEHNTEMHAILAEYGLPYE-FPEEVEKYAQGLDT 199
Query: 500 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 559
+ QEE+ R+D+R FTIDP A D DDALS ++L +G VGVHIADVSY+V P T
Sbjct: 200 TIKQEEIARRRDMREVLTFTIDPRDAKDFDDALSFQKLENGNYEVGVHIADVSYYVQPNT 259
Query: 560 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 619
LD EA R+TSVY++ R +PMLP +LS SL P ++ FS ++L+ ++ + W+
Sbjct: 260 ILDDEAYKRATSVYLVDRVVPMLPEVLSNFACSLRPEEEKYTFSAIFELSPRAEIRNVWL 319
Query: 620 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGW--------PQLYGQFE-WSDVVRS 670
GRTVIRS + SYE AQ +I+ FD L + P+ G ++ +V +
Sbjct: 320 GRTVIRSDARFSYEEAQAVIEA-FDTPYREVLTDFMMPEEISIRPE--GSYKVIQPIVEA 376
Query: 671 IKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLA 730
I SL +++I +DKR GA+ + + FL DE P ++ N L EEFMLLA
Sbjct: 377 ILSLNYLAEIFRDKRMKSGAISFDKLEVKFLLDENNNPIGVYTKESKEANKLIEEFMLLA 436
Query: 731 NKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQARE 790
N+ AE A + + R H P+ KL + + S+ G +L+ S S+ E
Sbjct: 437 NRKVAEY-ASKLKKTFVYRVHDEPDEEKLIQMQGIISRFGYKLNMQSKDSIAHSINHLLE 495
Query: 791 KL--KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYP 848
++ K + L D L A R M A+Y + GHY LAF YTHFTSP+RRYP
Sbjct: 496 EVHGKKEQNLVDTL---AIRSMSKAAYSTH-------NIGHYGLAFADYTHFTSPIRRYP 545
Query: 849 DLVVHRTLNAALEAE 863
D++VHR L L+ E
Sbjct: 546 DVMVHRLLQRYLDGE 560
>gi|449671731|ref|XP_004207554.1| PREDICTED: exosome complex exonuclease RRP44-like [Hydra
magnipapillata]
Length = 953
Score = 258 bits (658), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 158/429 (36%), Positives = 226/429 (52%), Gaps = 23/429 (5%)
Query: 435 IEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCL 494
++ + + ID W S +P H + G G + +L E+ + FS L L
Sbjct: 385 LQQKKIIVSIDCWPRNSRYPLGHYVRDLGESGNKATEKEVLLLEHDVPHQPFSQHVLDDL 444
Query: 495 PCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYF 554
P +PW + +++ L+R DLR I +IDP TD+DDAL L +G GVHIADVS F
Sbjct: 445 PKLPWCITEQDYLARHDLRELNICSIDPPGCTDIDDALHWRPLENGNFECGVHIADVSLF 504
Query: 555 VLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDV 614
V PGT LD +A+ R T+VY++ ++I M+P LLS ++ SL+ +R AFS W++ ++
Sbjct: 505 VKPGTHLDEKAKQRGTTVYLVDQRIDMIPELLSSDLCSLHEKEERFAFSCIWEMTPDAEI 564
Query: 615 VDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSL 674
V+ ++VI S L+Y AQ IID V+ + S+++L
Sbjct: 565 VNVNFVKSVICSKAALTYAEAQMIIDDNTRVDP-------------------IAISVRNL 605
Query: 675 YEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKT 733
E++K LK KR GAL L + + F D E P D D N L EEFMLLAN +
Sbjct: 606 NELAKKLKAKRIEFGALTLASPEVRFHIDSETHDPIDMQKKELRDTNSLVEEFMLLANIS 665
Query: 734 AAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLK 793
A+ + FP ++LR+HP P+ + + +D SS SL+ A +
Sbjct: 666 VAKKLYEHFPQHSVLRKHPTPSAAMFETLIKSAASLNVPIDISSGKSLQNSLDAA--VFE 723
Query: 794 DDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVH 853
DD +L +TR M A YFCSG K +D+ HY LA P+YTHFTSP+RRYPD++VH
Sbjct: 724 DDPYKNIMLRILSTRSMTQALYFCSGTEK-FSDYQHYGLATPIYTHFTSPIRRYPDIMVH 782
Query: 854 RTLNAALEA 862
R L A A
Sbjct: 783 RLLGVACGA 791
>gi|238503894|ref|XP_002383179.1| exosome complex exonuclease exoribonuclease (Rrp44), putative
[Aspergillus flavus NRRL3357]
gi|220690650|gb|EED46999.1| exosome complex exonuclease exoribonuclease (Rrp44), putative
[Aspergillus flavus NRRL3357]
Length = 1032
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 188/563 (33%), Positives = 276/563 (49%), Gaps = 69/563 (12%)
Query: 316 SDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQW 375
++ E V + ++ + R + S+ +PT +VV +I+R+ W
Sbjct: 348 AEDNEAVVTERERKALQEEVRQAHGKSTEGRPQPTAKVVGVIKRN--------------W 393
Query: 376 FNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATI 435
Y G + +++S S ++ + + P + PK+ V + + + +R
Sbjct: 394 RQYVGHVDSGSTGSQAS-SGRRQQNVFVLPMDKRVPKIRVRTRQASELLGQR-------- 444
Query: 436 EMELVAARIDEWNEESPFPQAHVLHVFG----RGGEVEPQINAILYENAICCSGFSPESL 491
+ ID W+ +S +P H + G +G E E A+L E + F L
Sbjct: 445 ----ILVTIDAWDRDSRYPTGHFIRSLGELETKGAETE----ALLLEYDVQYKPFPQAVL 496
Query: 492 SCLPCV--PWEVP--QEEL--LSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVG 545
CLP W VP +E++ R+DLR+ I +IDP D+DDAL L +G VG
Sbjct: 497 DCLPAEGHDWRVPASKEDIGWKGRRDLRDLLICSIDPPGCQDIDDALHARPLPNGNFEVG 556
Query: 546 VHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIF 605
VHIADVS+FV P A+D+EA +R T+VY++ ++I MLP LL ++ SL P V+R AFS+
Sbjct: 557 VHIADVSHFVKPNNAMDLEASLRGTTVYLVDKRIDMLPHLLGTDLCSLKPYVERYAFSVL 616
Query: 606 WDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWS 665
W++ +VV ++VIRS SYE AQ ID D + L E
Sbjct: 617 WEMTPNAEVVSTDFTKSVIRSREAFSYEQAQMRID---DPSKKDELTE------------ 661
Query: 666 DVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF--DEYGTPYDSVLS-GREDLNFL 722
S+++L SKIL+ KR GAL L + + DE G P V + N L
Sbjct: 662 ----SMRTLLRFSKILRQKRMDAGALNLASPEVRIEADNDEVGDPLTDVKTKAMLATNSL 717
Query: 723 FEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF-EAFCSKHGLQLDTSSSGQF 781
EEFML AN T A I F +A+LRRH P + E K ++LD SSS
Sbjct: 718 VEEFMLHANITVAAKIYSTFSQTAMLRRHATPPPQNFEELINQLSKKRDMRLDVSSSHAL 777
Query: 782 HQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHF 840
SL+Q + F+ L+ ATR M A YFC+G ++++ HY LA P+YTHF
Sbjct: 778 ADSLDQC---VDSKNPFFNTLVRILATRCMTSAEYFCAGAHA-ESEFRHYGLASPIYTHF 833
Query: 841 TSPLRRYPDLVVHRTLNAALEAE 863
TSP+RRY DL+VHR L +A+ E
Sbjct: 834 TSPIRRYADLLVHRQLASAIGYE 856
Score = 43.5 bits (101), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 155 ARCKIFAP-HWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQN 213
AR ++F P +++M + L G + ++ V+ +N LE + +LI G N
Sbjct: 250 ARGELFYPEYYTMSKIMTGLRAGTLHQGVFNVSPYNYLEGSVNVAAFDKPLLILGRDNSN 309
Query: 214 RAVEGDFVLIKV 225
RA+ GD V+I+V
Sbjct: 310 RAISGDVVVIEV 321
>gi|302413990|ref|XP_003004827.1| mitotic control protein dis3 [Verticillium albo-atrum VaMs.102]
gi|261355896|gb|EEY18324.1| mitotic control protein dis3 [Verticillium albo-atrum VaMs.102]
Length = 752
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 184/528 (34%), Positives = 257/528 (48%), Gaps = 59/528 (11%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 407
+PT +VV +I+R+ W Y G + ++S +E + L P
Sbjct: 143 QPTAKVVGVIKRN--------------WRQYVGHI-DPSSTSQSGTQGRRQENVFLIPMD 187
Query: 408 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 467
PK+ + + + + KRL ID W +S P H + G
Sbjct: 188 KCIPKIRIRTRQAAELLGKRL------------VVTIDGWERDSRHPVGHFVRSLGELET 235
Query: 468 VEPQINAILYENAICCSGFSPESLSCLPC------VPWEVPQEELLSRKDLRNFCIFTID 521
+ + A+L E + F L CLP VP + R+DLR+ I +ID
Sbjct: 236 KQAETEALLLEYDVQYRPFPKTVLDCLPKEGHDWRVPTSLDDPGWRDREDLRSLLICSID 295
Query: 522 PSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPM 581
P D+DDAL L +G VGVHIADVS FV P TA+D EA +R TSVY++ ++I M
Sbjct: 296 PIGCQDIDDALHARSLPNGNYEVGVHIADVSNFVKPLTAMDNEASIRGTSVYLVDKRIDM 355
Query: 582 LPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDG 641
LP+LL ++ SLNP ++R AFS+ W+LN D+V+ ++VI+S LSYE AQ +D
Sbjct: 356 LPMLLGTDLCSLNPYIERFAFSVIWELNENADIVNVRFTKSVIKSREALSYEQAQLRVD- 414
Query: 642 KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVF 700
++S T D+ + I+ L ++S+ LK KR GAL L + + V
Sbjct: 415 ----DASQT--------------DDLTQGIRMLMKLSRKLKQKRMDAGALSLSSPEVKVQ 456
Query: 701 LFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLR 760
+ E P D D L EEFML AN + A I AFP +A+LRRH AP
Sbjct: 457 MESETSDPIDVKTKELLDTMSLVEEFMLFANVSVAAKIYEAFPQTAILRRHGAPPKTNFD 516
Query: 761 EF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCS 818
E K GL+L SS SL+ + + F+ L+ ATR M A YFCS
Sbjct: 517 ELANQLKVKKGLELRVDSSKALADSLDTC---VDPENPFFNTLVRIMATRCMMSAEYFCS 573
Query: 819 GDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
G D ++ HY LA +YTHFTSP+RRY DL HR L AA+ E ++
Sbjct: 574 GTQTYD-EFRHYGLASEIYTHFTSPIRRYADLQAHRQLAAAIGYEAVH 620
>gi|67465834|ref|XP_649075.1| exosome complex exonuclease [Entamoeba histolytica HM-1:IMSS]
gi|56465429|gb|EAL43686.1| exosome complex exonuclease, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449707926|gb|EMD47488.1| exosome complex exonuclease, putative [Entamoeba histolytica KU27]
Length = 901
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 172/518 (33%), Positives = 257/518 (49%), Gaps = 55/518 (10%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 407
+PTG++V II+R+ W G ++++ + S+ + PT
Sbjct: 312 KPTGKIVGIIKRN--------------WKPLPGYIKQESSGSYST-------NLLFLPTD 350
Query: 408 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 467
++P P IK R A + + + ID W+ S +P H + G G+
Sbjct: 351 KRFP---------PIRIKAR---DPAKLASQRILVLIDAWDTTSKYPTGHYVATLGNVGD 398
Query: 468 VEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATD 527
+ AIL + I F L CLP +P+E+ ++ L R+D R + +IDP TD
Sbjct: 399 KASETEAILELHEIPHYEFPEIVLKCLPVLPFEITEDYLKGRRDFRKENVCSIDPPGCTD 458
Query: 528 LDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLS 587
+DDAL + L +G +GVHIADVS FV P TALD EA R T+VY+ R+I MLP L+
Sbjct: 459 IDDALHCKILPNGNYEIGVHIADVSCFVKPHTALDEEAAKRGTTVYLADRRIDMLPKPLT 518
Query: 588 EEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVES 647
E + S+ D L FS+ W+L+ +V++ + ++ S +Y AQ +ID K
Sbjct: 519 EVICSITQNTDTLTFSVVWELDKDANVINCTYHKGIVHSYRAYAYGQAQSVIDDK----- 573
Query: 648 SNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGT 707
SN S+ + ++++ +SK LK KR GAL L +S+ DE
Sbjct: 574 SNQ--------------SEYAQQLRAMLMLSKKLKQKRIDAGALMLASSEIKIEKDEQFN 619
Query: 708 PYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCS 767
P + N + EE+MLLAN A+ I AFP A+LRRHP P+
Sbjct: 620 PIGVKEYQTYETNSMVEEYMLLANVWVAKKIYDAFPHCAMLRRHPPPDEHTFEWLANVLK 679
Query: 768 KHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDW 827
G LD SSS +SL++ +D ++ I+ TR MQ A YF SG F + ++
Sbjct: 680 HKGKSLDFSSSKALSESLDKC--GTNEDPIIGKIMRILVTRCMQQAKYFSSGYFSYN-EF 736
Query: 828 GHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 865
HY LA +YTHFTSP+RRY D++VHR L A+ +++
Sbjct: 737 RHYGLAAEIYTHFTSPIRRYADVMVHRLLAQAIGFDQI 774
>gi|336172138|ref|YP_004579276.1| ribonuclease R [Lacinutrix sp. 5H-3-7-4]
gi|334726710|gb|AEH00848.1| ribonuclease R [Lacinutrix sp. 5H-3-7-4]
Length = 734
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 172/514 (33%), Positives = 258/514 (50%), Gaps = 42/514 (8%)
Query: 371 NVNQWFN------YKGGSRKDAKKNRSSLSVPDR---EYIQLTPTHPKYPKMVVLV---- 417
NVN+ N Y RK K ++ +R +Y+ + HPK V+V
Sbjct: 113 NVNKALNGDEVELYVYKRRKRGKLEGEITNIIERAKTDYVGIIQIHPKNNYAFVVVDGNK 172
Query: 418 --KDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAI 475
KD+ I K L+ D + V +++W E++ P VL V G+ GE +I+AI
Sbjct: 173 MNKDIFVPINKTLKAQDG----DKVLVTLEDWPEKADSPNGKVLKVLGKAGEHNTEIHAI 228
Query: 476 LYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIE 535
L + + F E + ++ EE+ R+D+R FTIDP A D DDALS
Sbjct: 229 LADYGLPYE-FPKEVEDYANNIDLKIQPEEIKKRRDMRKDLTFTIDPKDAKDFDDALSFT 287
Query: 536 RLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNP 595
L +G +G+HIADVS+++ GT LD EA R+TSVY++ R +PMLP +LS SL P
Sbjct: 288 VLENGNYEIGIHIADVSHYLQEGTVLDDEAYERATSVYLVDRVVPMLPEILSNGACSLRP 347
Query: 596 GVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGW 655
++ FS ++L++ + + W GRTV S + +YE AQ II+ K + +N
Sbjct: 348 HEEKYTFSAVFELDNKAQIKNEWFGRTVTYSDARFAYEEAQAIIENKNNTIPANV----- 402
Query: 656 PQLYGQFEWSD--VVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVL 713
L G+ +D + ++ + E++KI++ KR GA+ + + F DE P
Sbjct: 403 -SLTGKEYKTDQAIADAVLKMDELAKIMRSKRMRSGAISFDKVEVKFNLDEDANPVGVFF 461
Query: 714 SGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRR-HPAPNMRKLREFEAFCSKHGLQ 772
+D N L EEFMLLAN+ +E + + P+ + R H P+ KL + +K G +
Sbjct: 462 KTSKDANKLIEEFMLLANRKVSEFVGKQKPEKTFVYRVHDEPDESKLAALQGVVAKFGHK 521
Query: 773 LDTSSSGQFHQSLEQAREKL--KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHY 830
L+ + G QSL + + K + L D L A R M A Y + GHY
Sbjct: 522 LNF-NKGNVSQSLNKLLVDVQGKKEQNLVDTL---AIRTMSKAEYTTH-------NIGHY 570
Query: 831 ALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
LAF Y+HFTSP+RRYPD++ HR L L+ EK
Sbjct: 571 GLAFDYYSHFTSPIRRYPDVMAHRLLQRYLDGEK 604
>gi|169764839|ref|XP_001816891.1| exosome complex exonuclease DIS3 [Aspergillus oryzae RIB40]
gi|83764745|dbj|BAE54889.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391863230|gb|EIT72541.1| exosomal 3'-5' exoribonuclease complex, subunit Rrp44/Dis3
[Aspergillus oryzae 3.042]
Length = 1032
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 188/563 (33%), Positives = 276/563 (49%), Gaps = 69/563 (12%)
Query: 316 SDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQW 375
++ E V + ++ + R + S+ +PT +VV +I+R+ W
Sbjct: 348 AEDNEAVVTERERKALQEEVRQAHGKSTEGRPQPTAKVVGVIKRN--------------W 393
Query: 376 FNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATI 435
Y G + +++S S ++ + + P + PK+ V + + + +R
Sbjct: 394 RQYVGHVDSGSTGSQAS-SGRRQQNVFVLPMDKRVPKIRVRTRQASELLGQR-------- 444
Query: 436 EMELVAARIDEWNEESPFPQAHVLHVFG----RGGEVEPQINAILYENAICCSGFSPESL 491
+ ID W+ +S +P H + G +G E E A+L E + F L
Sbjct: 445 ----ILVTIDAWDRDSRYPTGHFIRSLGELETKGAETE----ALLLEYDVQYKPFPQAVL 496
Query: 492 SCLPCV--PWEVP--QEEL--LSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVG 545
CLP W VP +E++ R+DLR+ I +IDP D+DDAL L +G VG
Sbjct: 497 DCLPAEGHDWRVPASKEDIGWKGRRDLRDLLICSIDPPGCQDIDDALHARPLPNGNFEVG 556
Query: 546 VHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIF 605
VHIADVS+FV P A+D+EA +R T+VY++ ++I MLP LL ++ SL P V+R AFS+
Sbjct: 557 VHIADVSHFVKPNNAMDLEASLRGTTVYLVDKRIDMLPHLLGTDLCSLKPYVERYAFSVL 616
Query: 606 WDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWS 665
W++ +VV ++VIRS SYE AQ ID D + L E
Sbjct: 617 WEMTPNAEVVSTDFTKSVIRSREAFSYEQAQMRID---DPSKKDELTE------------ 661
Query: 666 DVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF--DEYGTPYDSVLS-GREDLNFL 722
S+++L SKIL+ KR GAL L + + DE G P V + N L
Sbjct: 662 ----SMRTLLRFSKILRQKRMDAGALNLASPEVRIEADNDEVGDPLTDVKTKAMLATNSL 717
Query: 723 FEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF-EAFCSKHGLQLDTSSSGQF 781
EEFML AN T A I F +A+LRRH P + E K ++LD SSS
Sbjct: 718 VEEFMLHANITVAAKIYSTFSQTAMLRRHATPPPQNFEELINQLSKKRDMRLDVSSSRAL 777
Query: 782 HQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHF 840
SL+Q + F+ L+ ATR M A YFC+G ++++ HY LA P+YTHF
Sbjct: 778 ADSLDQC---VDSKNPFFNTLVRILATRCMTSAEYFCAGAHA-ESEFRHYGLASPIYTHF 833
Query: 841 TSPLRRYPDLVVHRTLNAALEAE 863
TSP+RRY DL+VHR L +A+ E
Sbjct: 834 TSPIRRYADLLVHRQLASAIGYE 856
Score = 43.5 bits (101), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 155 ARCKIFAP-HWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQN 213
AR ++F P +++M + L G + ++ V+ +N LE + +LI G N
Sbjct: 250 ARGELFYPEYYTMSKIMTGLRAGTLHQGVFNVSPYNYLEGSVNVAAFDKPLLILGRDNSN 309
Query: 214 RAVEGDFVLIKV 225
RA+ GD V+I+V
Sbjct: 310 RAISGDVVVIEV 321
>gi|47213260|emb|CAF92921.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1074
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 186/552 (33%), Positives = 271/552 (49%), Gaps = 70/552 (12%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTGRVV I++R+ RD +V F P RE Q P
Sbjct: 312 PTGRVVGILQRN-WRDYVVTF--------------------------PPREGPQSQGRGP 344
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
K+ V + +P I+ ++ DA ++ V RID W S +P H++ V GR GE+
Sbjct: 345 KHVLTVPWDRRIP-KIRVGTQQADA-LQGHRVVVRIDSWESTSQYPNGHMVRVLGRAGEL 402
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLR-NFCIFTIDPS 523
E +I +L EN I S FS L +P PW V ++ +R+DLR + +F+IDP
Sbjct: 403 ETEIQTVLVENGIHLSPFSDAQLREMPVSSPERPWRVDPDQAAARRDLRESHLVFSIDPR 462
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
D+DDALS+ RL G+ +GVHIADV++FV G+ D+EA++R+T+ Y+ R+ MLP
Sbjct: 463 GCEDVDDALSVRRLDGGLLELGVHIADVTHFVKEGSLTDVEARLRATTYYLADRRYDMLP 522
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV-DRWIGRTVIRSCCKLSYEHAQDIIDGK 642
+LS ++ SL GV R A S+ W L++ V D W GRTVIRS +L YE AQ +++G+
Sbjct: 523 PVLSSDLCSLLGGVGRYAMSVMWQLDAHTLAVKDVWFGRTVIRSSYQLHYELAQALLNGE 582
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
E G G + + + + ++++ L +V++ L+ R GAL LE +
Sbjct: 583 -QAEVPELAGLGPEERDARL--AKLTQALEMLTQVARRLRAHRDRGGALELEGVEVRAQL 639
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
D+ V +++ E M+ AN A I AFP ALLRRHP P +
Sbjct: 640 DKDKNITALVPRQPLEVHETVAECMIHANHWVARRIQEAFPHQALLRRHPPPRQEVFGQL 699
Query: 763 EAFCSKHGLQLDT----------------------------SSSGQFHQSLEQAREKLKD 794
+ G + T S+ + +SL++A +
Sbjct: 700 VDSAAAKGFAITTRHTFSPRGGCLPLNLQRMSPLIFCFYLCRSNKELAESLDRAVD--PQ 757
Query: 795 DYVLFDILINYATRPMQLASYFCSG--DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 852
D ++ +L AT M A YF +G D D HY LA YTHFTSP+RRY D+VV
Sbjct: 758 DALVNRLLRMMATSAMSQALYFSTGAQDQAQDQYQYHYGLALEKYTHFTSPIRRYADMVV 817
Query: 853 HRTLNAALEAEK 864
HR L AA+ EK
Sbjct: 818 HRLLAAAISLEK 829
>gi|448262642|pdb|4IFD|J Chain J, Crystal Structure Of An 11-subunit Eukaryotic Exosome
Complex Bound To Rna
Length = 1003
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 231/751 (30%), Positives = 344/751 (45%), Gaps = 136/751 (18%)
Query: 160 FAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEGD 219
F ++S V L+ G ++ +++ +N LE + VLI G NRA GD
Sbjct: 257 FPEYYSTARVMGGLKNGVLYQGNIQISEYNFLEGSVSLPRFSKPVLIVGQKNLNRAFNGD 316
Query: 220 FVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCTLL 279
V++++ S W SSIV DS H D+ D+
Sbjct: 317 QVIVELLPQSEWKA------PSSIVLDSE--------HFDV---NDNPDI---------- 349
Query: 280 SEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSA 339
E G DDD ++E +S +T +S Q+ + A
Sbjct: 350 -EAG---DDDDNNE---------------------SSSNTTVISDKQRR-----LLAKDA 379
Query: 340 MISSYPTK-RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDR 398
MI+ K +PT +VV I RS W Y G + +SS +
Sbjct: 380 MIAQRSKKIQPTAKVVYIQRRS--------------WRQYVGQLAPSSVDPQSSST---- 421
Query: 399 EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHV 458
+ ++++ K LP ++ R ++ +V + ID W +P H
Sbjct: 422 ----------QNVFVILMDKCLP-KVRIRTRRAAELLDKRIVIS-IDSWPTTHKYPLGHF 469
Query: 459 LHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV------------PWEVPQEEL 506
+ G + + A+L E+ + FS + L CLP P V ++ L
Sbjct: 470 VRDLGTIESAQAETEALLLEHDVEYRPFSKKVLECLPAEGHDWKAPTKLDDPEAVSKDPL 529
Query: 507 LS-RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEA 565
L+ RKDLR+ I +IDP D++DAL ++L +G VGVHIADV++FV PGTALD E
Sbjct: 530 LTKRKDLRDKLICSIDPPGCVDINDALHAKKLPNGNWEVGVHIADVTHFVKPGTALDAEG 589
Query: 566 QVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIR 625
R TSVY++ ++I MLP+LL ++ SL P VDR AFS+ W+L+ + ++V+ ++VIR
Sbjct: 590 AARGTSVYLVDKRIDMLPMLLGTDLCSLKPYVDRFAFSVIWELDDSANIVNVNFMKSVIR 649
Query: 626 SCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKR 685
S SYE AQ ID K ++ L G +++L ++S LK KR
Sbjct: 650 SREAFSYEQAQLRIDDK---TQNDELTMG----------------MRALLKLSVKLKQKR 690
Query: 686 FTDGALRLENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPD 744
GAL L + + V + E P + + N L EEFMLLAN + A I AFP
Sbjct: 691 LEAGALNLASPEVKVHMDSETSDPNEVEIKKLLATNSLVEEFMLLANISVARKIYDAFPQ 750
Query: 745 SALLRRHPAP---NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDI 801
+A+LRRH AP N L E ++ + + SS SL++ + +D Y F+
Sbjct: 751 TAMLRRHAAPPSTNFEILNEM--LNTRKNMSISLESSKALADSLDRCVDP-EDPY--FNT 805
Query: 802 LIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
L+ +TR M A YF SG + D+ HY LA +YTHFTSP+RRY D+V HR L A+
Sbjct: 806 LVRIMSTRCMMAAQYFYSGAYS-YPDFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAI 864
Query: 861 EAEKLYWKHR-----RMLPKNNHREGVRGRF 886
E L HR M+ +N +R+ +F
Sbjct: 865 GYEPLSLTHRDKNKMDMICRNINRKHRNAQF 895
>gi|392587639|gb|EIW76973.1| RNB-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 997
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 187/546 (34%), Positives = 264/546 (48%), Gaps = 69/546 (12%)
Query: 336 RLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDA--KKNRSSL 393
R+SA K+PTGR+V +++R+ W Y + + N +SL
Sbjct: 365 RVSAEEKKAAEKQPTGRIVGVVKRN--------------WRAYVCHIDRTSLTSSNATSL 410
Query: 394 SVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPF 453
S ++ + TP P++ + + P T+ + + ID W+ S +
Sbjct: 411 S---QQTVFATPVSRLLPRIRIRTRQAP------------TLLGQKIIVSIDRWDPSSRY 455
Query: 454 PQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP--CVPWEVP-----QEEL 506
P+ H + G E + ++L E + F L CLP W VP E
Sbjct: 456 PEGHFVRALGHSESKEAEQESLLLEFDVPYRPFGRAILDCLPKEGEQWVVPPMSASSEVW 515
Query: 507 LSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQ 566
+R DLR+ + +IDP D+DDAL RL++G GVHIADVS+FV T +D EA
Sbjct: 516 RNRTDLRHLNVCSIDPPGCQDIDDALHARRLTNGNIEAGVHIADVSHFVHADTPMDTEAA 575
Query: 567 VRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRS 626
R T+VY++ ++I MLP LL + SL P V+RLAFS W+L D+V+ ++VI S
Sbjct: 576 ARGTTVYLVDKRIDMLPSLLGTNLCSLRPHVERLAFSAIWELTPEADIVNVRFTKSVIAS 635
Query: 627 CCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRF 686
Y AQ D D ++ L E SI+ L +++ K KR
Sbjct: 636 KAAFEYGEAQIRKD---DPNRTDELTE----------------SIRLLNTLAEKFKAKRM 676
Query: 687 TDGALRLENSKPVFLFD--EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPD 744
GAL L + + D E P D + N L EEFMLLAN + A+ I AFP
Sbjct: 677 QAGALNLASPEVKIHLDSPESSDPIDVEQKALHETNSLVEEFMLLANISVAKRIQEAFPQ 736
Query: 745 SALLRRH---PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDI 801
+A+LRRH P N KL++ + GL LD SSSG SL+ + KD F+
Sbjct: 737 TAVLRRHMPPPKTNFEKLQDI--LMKRKGLTLDVSSSGALADSLDHCIDP-KD--ATFNT 791
Query: 802 LIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
L+ ATR M A YF SG DT + HY LA P+YTHFTSP+RRY D++ HR L AA+
Sbjct: 792 LVRIMATRCMLSAEYFSSGSVARDT-FAHYGLATPIYTHFTSPIRRYADVLAHRQLAAAI 850
Query: 861 EAEKLY 866
+ L+
Sbjct: 851 DYAPLH 856
>gi|347534972|ref|YP_004842397.1| ribonuclease R [Flavobacterium branchiophilum FL-15]
gi|345528130|emb|CCB68160.1| Ribonuclease R [Flavobacterium branchiophilum FL-15]
Length = 726
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 177/550 (32%), Positives = 275/550 (50%), Gaps = 70/550 (12%)
Query: 327 QNDGMN-AIERLSAMISSY---PTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGS 382
QN+ +N A+++ + + Y K+P G VV +IER + VG + + + F +
Sbjct: 108 QNNNLNHALDKDTVKVYVYNRRKGKKPEGEVVEVIER--HKSEFVGVIEIQKNFAF---- 161
Query: 383 RKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAA 442
+T +PK + + KD + GDAT ++V
Sbjct: 162 --------------------VTTANPKMYTDIFIPKD---------KIGDAT-HGDVVLV 191
Query: 443 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVP 502
I++W + + P V+ V G+ GE +I+AIL E + S F + + +
Sbjct: 192 HIEDWPKRADSPFGAVIKVLGKPGEHNTEIHAILAEYGLP-SEFDLDVTLFAQKIDTSIQ 250
Query: 503 QEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALD 562
+ E+ +R+D+R+ FTIDP A D DDALS + L +G +G+HIADVSY++ T LD
Sbjct: 251 ESEIANRRDMRDTLTFTIDPKDAKDFDDALSYKVLDNGNFEIGIHIADVSYYLKENTILD 310
Query: 563 IEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRT 622
EA R+TSVY++ R +PMLP +LS SL P ++ FS +++NS VV W GRT
Sbjct: 311 DEAYQRATSVYLVDRVVPMLPEVLSNFACSLRPNEEKYTFSAVFEINSKAQVVSEWFGRT 370
Query: 623 VIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQ-FEWSD-VVRSIKSLYEVSKI 680
VI S + +YE AQ +I+ + S+T+ + G +E + V+ ++ L ++KI
Sbjct: 371 VIYSNQRFAYEEAQYLIENQ-----SDTIIPSAISITGTAYEVAQPVIDAVLKLDTLAKI 425
Query: 681 LKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR 740
L+ KR DGA+ + + F E G P +D N L EEFMLLAN+ AE I +
Sbjct: 426 LRKKRMADGAISFDKVEVKFHLSEDGNPDGVYFKISKDANHLIEEFMLLANRKVAEFIGK 485
Query: 741 AFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLD------TSSSGQFHQSLEQAREKLKD 794
+ + R H PN KL + SK G +++ + + Q Q + ++E+
Sbjct: 486 Q-KKTFIYRIHDEPNEDKLFAMQDLISKFGYKVNFKKGDVSKALNQLMQDVHGSKEQ--- 541
Query: 795 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 854
+++ A R M A Y + GHY LAF Y+HFTSP+RRYPD++VHR
Sbjct: 542 -----NLIDTLAIRSMSKAKYTTQ-------NIGHYGLAFDYYSHFTSPIRRYPDVMVHR 589
Query: 855 TLNAALEAEK 864
L L+ K
Sbjct: 590 LLQFYLDGGK 599
>gi|390595687|gb|EIN05091.1| RNB-domain-containing protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 982
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 192/551 (34%), Positives = 264/551 (47%), Gaps = 73/551 (13%)
Query: 347 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNY--KGGSRKDAKKNRSSLSVPDREYIQLT 404
K+PTGRVV +I+R+ W Y S + N +SLS ++ + T
Sbjct: 363 KQPTGRVVGVIKRN--------------WRAYVCHIDSTSLSSLNATSLS---QQTVFAT 405
Query: 405 PTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGR 464
P P++ + + P I ++ + ID W S +P+ H + GR
Sbjct: 406 PVSRLLPRIRMRTRQAPTLIGQK------------ILVTIDRWEPTSRYPEGHFVRALGR 453
Query: 465 GGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQE-----ELLSRKDLRNFCI 517
E + ++L E + F L CLP W VP + E R+DLR+ I
Sbjct: 454 VESKEAEQESLLLEYEVPYRPFGKAILDCLPVEGDKWVVPTKSDTSPEWRDREDLRDMII 513
Query: 518 FTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 577
+IDP D+DDAL L +G GVHIADVS+FV T +D EA R T+VY++ +
Sbjct: 514 CSIDPPGCQDIDDALHARLLPNGNIEAGVHIADVSHFVHADTPMDNEAAARGTTVYLVDK 573
Query: 578 KIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQD 637
+I MLP LL + SL P V+RLAFS W+L +V ++VI S +Y+ AQ
Sbjct: 574 RIDMLPSLLGTNLCSLRPYVERLAFSCIWELTPNAQIVKVRFTKSVIASKAAFTYKEAQM 633
Query: 638 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 697
D P L ++ +SI+ L ++ LK R GAL L + +
Sbjct: 634 RKDD--------------PNLN-----DELTKSIRLLNSLALKLKAGRMAAGALNLASPE 674
Query: 698 PVFLFD--EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH---P 752
D E P D + N L EEFMLLAN + A+ I FP +A+LRRH P
Sbjct: 675 VKIHMDSAESSDPIDVEQKEMLETNSLVEEFMLLANISVAQKIQETFPQTAVLRRHLPPP 734
Query: 753 APNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQ 811
N KL++ + GL LD SSSG +SL+Q L F+ L+ ATR M
Sbjct: 735 RTNFEKLQDI--LQKRKGLTLDVSSSGALAKSLDQC---LDPKEPAFNTLVRIMATRCML 789
Query: 812 LASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRR 871
A YF SG DT +GHY LA P+YTHFTSP+RRY D++VHR L+AA+ YW
Sbjct: 790 SAEYFNSGSVARDT-FGHYGLASPIYTHFTSPIRRYADVLVHRQLSAAIS----YWPLHP 844
Query: 872 MLPKNNHREGV 882
L +H E V
Sbjct: 845 SLHSKSHVERV 855
>gi|343084834|ref|YP_004774129.1| ribonuclease R [Cyclobacterium marinum DSM 745]
gi|342353368|gb|AEL25898.1| ribonuclease R [Cyclobacterium marinum DSM 745]
Length = 725
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 169/492 (34%), Positives = 250/492 (50%), Gaps = 45/492 (9%)
Query: 381 GSRKDAKKNRSSLSVPDR---EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEM 437
G+R++ K L + +R E++ P++ +V K + I R +
Sbjct: 144 GNRREGK----VLEIMERSRDEFVGRIEISPRFAFVVPDFKKMHHDIFVRKSDLAGAQHN 199
Query: 438 ELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV 497
+ V ++ +W E P ++HV G+ G+ E +I++I+ E + + E + +
Sbjct: 200 QKVVVKLTDWKEGDKSPSGKIIHVLGKAGDHEVEIHSIMAEFGLPFD-YPEEVEAEAESI 258
Query: 498 PWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLP 557
+P++E+ RKD R+ FTIDP+ A D DDA+S L +G +GVHIADV+++V P
Sbjct: 259 SEVIPEDEIKKRKDFRDIDTFTIDPADAKDFDDAISFRYLDNGNMEIGVHIADVTHYVKP 318
Query: 558 GTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR 617
T ++ EA R+TSVY++ R IPMLP LS + SL P D+L FS +++ +V D
Sbjct: 319 KTLMEKEAYDRATSVYLVDRTIPMLPERLSNGLCSLRPNEDKLTFSCVFEITDQAEVKDF 378
Query: 618 WIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEV 677
WIGRTVI S + +YE AQ+ +D N G E++ + I SL
Sbjct: 379 WIGRTVIHSNRRFTYEEAQENMD--------NESG----------EYAKDLLKINSL--- 417
Query: 678 SKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEV 737
+K+L+ RF GA+ E + F DE GTP ++ R+D++ L EEFMLLANKT A
Sbjct: 418 AKLLRSARFKKGAINFETVEVKFQLDESGTPTGLIIKERKDVHKLIEEFMLLANKTVATY 477
Query: 738 I--ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDD 795
I + + R H P++ KL F F K G ++ + SL KL DD
Sbjct: 478 IYNKNKGKSTFVYRVHDYPDLEKLATFSNFAKKFGHEIKILDEKKVSNSL----NKLMDD 533
Query: 796 YV---LFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 852
V +IL A R M A Y H+ LAF YTHFTSP+RRYPD++V
Sbjct: 534 IVGKPEQNILEQLAIRSMAKAKYTTEPK-------QHFGLAFDHYTHFTSPIRRYPDMMV 586
Query: 853 HRTLNAALEAEK 864
HR L L+ K
Sbjct: 587 HRLLQHYLDGGK 598
>gi|332019034|gb|EGI59568.1| Exosome complex exonuclease RRP44 [Acromyrmex echinatior]
Length = 976
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 181/530 (34%), Positives = 267/530 (50%), Gaps = 64/530 (12%)
Query: 342 SSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDA-KKNRSSLSVPDREY 400
S K PTG++V II R +W Y G + A K N L VP
Sbjct: 328 SKMQEKIPTGKIVGIIRR--------------KWRQYCGILQPSAIKTNVRHLFVP---- 369
Query: 401 IQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATI-EMELVAARIDEWNEESPFPQAHVL 459
K PK+ R+E A I + + +D W S +P H +
Sbjct: 370 -----AERKIPKI-------------RIETRQAEILSKQRIIVALDSWPRNSRYPLGHFV 411
Query: 460 HVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFT 519
G G+ E + +L E+ + S FS LS LP +PW + + ++ R+DLR I +
Sbjct: 412 RALGNIGDKETENEVLLLEHDVPHSRFSDAVLSFLPKLPWIITETDVAQREDLRYLDICS 471
Query: 520 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 579
+DP TD+DDAL LS+G VGVHIADVS+F+ PGTALD EA +R+T+VY++ ++I
Sbjct: 472 VDPPGCTDIDDALHCRSLSNGNFDVGVHIADVSHFIRPGTALDKEAALRATTVYLVDKRI 531
Query: 580 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDII 639
M+P LLS + SL +R AFS W+++S ++++ +++I S ++YE AQ I
Sbjct: 532 DMVPELLSSNLCSLRGKEERFAFSCIWEIDSDANIINMRFCKSIICSRQAMTYEEAQLKI 591
Query: 640 DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPV 699
D ++ + +S++ L +++K LK KR +GAL L + +
Sbjct: 592 DDATQQDA-------------------IAKSLRGLNQLAKKLKKKRLENGALTLASPEIR 632
Query: 700 FLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRK 758
F D E P D D N + EEFMLLAN + AE I FP+ A+LRRHP P
Sbjct: 633 FQVDSETHDPIDVEAKKLRDTNSMVEEFMLLANISVAEKILAEFPECAMLRRHPEPPQSN 692
Query: 759 LREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFC 817
G ++TS+ +F +SLE+ K+ F+ ++ ATR M A YF
Sbjct: 693 FEPLIKAAKNQGFIINTSTGKEFARSLEETH---KESNPYFNTMLKILATRCMLQAVYFI 749
Query: 818 SGDFKDDTDWGHYALAFPVYTHFTSPLRR-YPDLVVHRTLNAALEAEKLY 866
SG + + ++ HY LA +YTHFTSP+RR Y D++VHR L + A+ Y
Sbjct: 750 SGMHQPE-EFKHYGLACSIYTHFTSPIRRQYADIIVHRLLAVCIGADATY 798
Score = 40.4 bits (93), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 34/68 (50%)
Query: 158 KIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVE 217
++F H S V+ + G + + + N LE +EG + + + G A NRAV+
Sbjct: 222 ELFPCHLSPTEVHNGISSGKLLQGTFLASRENFLEGNVNVEGREKHIFVQGRAHLNRAVD 281
Query: 218 GDFVLIKV 225
GD V +++
Sbjct: 282 GDIVAVEM 289
>gi|266618486|pdb|2WP8|J Chain J, Yeast Rrp44 Nuclease
Length = 977
Score = 257 bits (656), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 231/751 (30%), Positives = 344/751 (45%), Gaps = 136/751 (18%)
Query: 160 FAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEGD 219
F ++S V L+ G ++ +++ +N LE + VLI G NRA GD
Sbjct: 231 FPEYYSTARVMGGLKNGVLYQGNIQISEYNFLEGSVSLPRFSKPVLIVGQKNLNRAFNGD 290
Query: 220 FVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCTLL 279
V++++ S W SSIV DS H D+ D+
Sbjct: 291 QVIVELLPQSEWKA------PSSIVLDSE--------HFDV---NDNPDI---------- 323
Query: 280 SEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSA 339
E G DDD ++E +S +T +S Q+ + A
Sbjct: 324 -EAG---DDDDNNE---------------------SSSNTTVISDKQRR-----LLAKDA 353
Query: 340 MISSYPTK-RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDR 398
MI+ K +PT +VV I RS W Y G + +SS +
Sbjct: 354 MIAQRSKKIQPTAKVVYIQRRS--------------WRQYVGQLAPSSVDPQSSST---- 395
Query: 399 EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHV 458
+ ++++ K LP ++ R ++ +V + ID W +P H
Sbjct: 396 ----------QNVFVILMDKCLP-KVRIRTRRAAELLDKRIVIS-IDSWPTTHKYPLGHF 443
Query: 459 LHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV------------PWEVPQEEL 506
+ G + + A+L E+ + FS + L CLP P V ++ L
Sbjct: 444 VRDLGTIESAQAETEALLLEHDVEYRPFSKKVLECLPAEGHDWKAPTKLDDPEAVSKDPL 503
Query: 507 LS-RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEA 565
L+ RKDLR+ I +IDP D++DAL ++L +G VGVHIADV++FV PGTALD E
Sbjct: 504 LTKRKDLRDKLICSIDPPGCVDINDALHAKKLPNGNWEVGVHIADVTHFVKPGTALDAEG 563
Query: 566 QVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIR 625
R TSVY++ ++I MLP+LL ++ SL P VDR AFS+ W+L+ + ++V+ ++VIR
Sbjct: 564 AARGTSVYLVDKRIDMLPMLLGTDLCSLKPYVDRFAFSVIWELDDSANIVNVNFMKSVIR 623
Query: 626 SCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKR 685
S SYE AQ ID K ++ L G +++L ++S LK KR
Sbjct: 624 SREAFSYEQAQLRIDDK---TQNDELTMG----------------MRALLKLSVKLKQKR 664
Query: 686 FTDGALRLENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPD 744
GAL L + + V + E P + + N L EEFMLLAN + A I AFP
Sbjct: 665 LEAGALNLASPEVKVHMDSETSDPNEVEIKKLLATNSLVEEFMLLANISVARKIYDAFPQ 724
Query: 745 SALLRRHPAP---NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDI 801
+A+LRRH AP N L E ++ + + SS SL++ + +D Y F+
Sbjct: 725 TAMLRRHAAPPSTNFEILNEM--LNTRKNMSISLESSKALADSLDRCVDP-EDPY--FNT 779
Query: 802 LIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
L+ +TR M A YF SG + D+ HY LA +YTHFTSP+RRY D+V HR L A+
Sbjct: 780 LVRIMSTRCMMAAQYFYSGAYS-YPDFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAI 838
Query: 861 EAEKLYWKHR-----RMLPKNNHREGVRGRF 886
E L HR M+ +N +R+ +F
Sbjct: 839 GYEPLSLTHRDKNKMDMICRNINRKHRNAQF 869
>gi|402220533|gb|EJU00604.1| RNB-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 983
Score = 257 bits (656), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 165/474 (34%), Positives = 242/474 (51%), Gaps = 46/474 (9%)
Query: 404 TPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG 463
TP P P++ + + P + ++ + ID+W+ +S +P+ H + G
Sbjct: 417 TPVSPNLPRIRLRTRQAPQLVHQK------------IVVSIDKWDVDSRYPEGHFVRALG 464
Query: 464 RGGEVEPQINAILYENAICCSGFSPESLSCLP--CVPWEVPQEELLS-----RKDLRNFC 516
+ G E + ++L E + F L CLP W VP + S R+DLR
Sbjct: 465 QVGSKEAEQESLLLEWEVPYRAFGRAILDCLPKEGDAWVVPPKTEDSIVWRDREDLREMI 524
Query: 517 IFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQ 576
I +IDP D+DDAL RL +G GVHIADVS+FVLP A+D EA R T+VY++
Sbjct: 525 ICSIDPPGCQDIDDALHARRLPNGNIEAGVHIADVSHFVLPDNAMDTEAAARGTTVYLVD 584
Query: 577 RKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQ 636
++I MLP LL + SL V+RLAFS+ W+L +++ ++VI S +Y+ AQ
Sbjct: 585 KRIDMLPSLLGTNLCSLRAHVERLAFSVIWELTPEAKIINVRFTKSVIASKAAFTYKEAQ 644
Query: 637 DIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENS 696
D ++ ++ + E SI+ L ++K L+ R GAL L +
Sbjct: 645 TRKD---NLALTDPVSE----------------SIRLLNALAKKLRAARMAAGALNLASP 685
Query: 697 KPVFLFD--EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAP 754
+ + E P D + + N L EEFMLLAN + A I FP +A+LRRH P
Sbjct: 686 EVRIQMESPESSDPVDVEQKEQLETNSLVEEFMLLANISVAAKIQETFPQTAVLRRHQPP 745
Query: 755 NMRKLREFE-AFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQL 812
E + G++LD SSSG SL+ + D F+IL+ ATR M+
Sbjct: 746 PASNFELLEDVLLKRKGMKLDISSSGALANSLDTC---VIADEPDFNILVRIMATRCMRP 802
Query: 813 ASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
A YFC+G +T +GHY LA P+YTHFTSP+RR+ D++VHR L AA+ L+
Sbjct: 803 AEYFCAGSVSRET-FGHYGLASPIYTHFTSPIRRFADVLVHRQLAAAINYTPLH 855
>gi|50552065|ref|XP_503507.1| YALI0E03630p [Yarrowia lipolytica]
gi|49649376|emb|CAG79086.1| YALI0E03630p [Yarrowia lipolytica CLIB122]
Length = 986
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 217/748 (29%), Positives = 333/748 (44%), Gaps = 137/748 (18%)
Query: 150 SHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGI 209
S +SEA ++ ++ M + ++ G F+ ++ +N LE + +LI G
Sbjct: 244 SGKSEA---LYPEYYPMSRLLGGIKNGTLFQGNLTISPYNVLEGSVSTKAYPKPLLILGR 300
Query: 210 AAQNRAVEGDFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDV 269
+ NRA GD V+++ L K K + ++S++E +L G
Sbjct: 301 QSLNRAFSGDQVVVE-----LLPKDKWKTPSTSVIESEDLAANEGG-------------- 341
Query: 270 SYEYSNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQND 329
E S T++SE D + +A+ E +D+ E+V
Sbjct: 342 --EESGDTVMSESERKLLADDALKAHKNE-----------------ADAAERV------- 375
Query: 330 GMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKN 389
+PT RVV II+RS W Y G
Sbjct: 376 ------------------QPTARVVGIIKRS--------------WRYYVG--------- 394
Query: 390 RSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNE 449
+ I P+ + ++ K LP ++ R + A +V A +D W
Sbjct: 395 ----HIAPGSIIDDVSRGPRSVLVALMDKTLP-RVRIRTRQAAALQGRRIVVA-VDSWPA 448
Query: 450 ESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC--VPWEVPQEEL- 506
+S P+ H G + + A+L E+ + F+ L CLP W+VPQ+ +
Sbjct: 449 DSRHPEGHFCRDLGPIESKQAETEALLLEHDVEYRPFTKAVLDCLPAEGPDWKVPQDLVK 508
Query: 507 ---------LSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLP 557
R+DLR+ I +IDP D+DDAL L +G +GVHIADV++FV P
Sbjct: 509 EAAEKDPLVAKRRDLRHLNICSIDPPGCQDIDDALHARVLPNGNYELGVHIADVTHFVKP 568
Query: 558 GTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR 617
TALD E R TSVY++ ++I MLP+LL + S+NP V+R AFS+ W++ G +V+
Sbjct: 569 DTALDQEGASRGTSVYLVDKRIDMLPMLLGTNLCSINPYVERYAFSVLWEMTPDGKIVNT 628
Query: 618 WIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEV 677
+++I S SY AQ ID D ++ L EG ++ L +
Sbjct: 629 DFTKSIISSREAFSYAEAQARID---DPSKTDELTEG----------------MRVLLKF 669
Query: 678 SKILKDKRFTDGALRLENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 736
SK LK R GAL L + + V + E P + + + N L EEFMLLAN + A+
Sbjct: 670 SKQLKQGRIDAGALNLASPEVKVHIDSETSDPGEVEVKELLETNSLVEEFMLLANTSVAK 729
Query: 737 VIARAFPDSALLRRHPAPNMRKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDD 795
I +FP +A+LRRH AP + + G+ + SS SL++ + +
Sbjct: 730 KIYESFPQTAMLRRHGAPPATNFETLNDQLRTIKGMSISLESSKALADSLDKC---IDPN 786
Query: 796 YVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 854
F+ L+ ATR M A YF SG + ++ HY LA +YTHFTSP+RRY D+V HR
Sbjct: 787 EPFFNTLVRIVATRSMLAAEYFSSGSYA-YPEFRHYGLASEIYTHFTSPIRRYADVVAHR 845
Query: 855 TLNAALEAEKLYWKHRRMLPKNNHREGV 882
L AA+ E L+ HR + +H E +
Sbjct: 846 QLAAAIGYEPLHQSHR----EKDHMESI 869
>gi|254584977|ref|XP_002498056.1| ZYRO0G01166p [Zygosaccharomyces rouxii]
gi|238940950|emb|CAR29123.1| ZYRO0G01166p [Zygosaccharomyces rouxii]
Length = 993
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 188/541 (34%), Positives = 268/541 (49%), Gaps = 73/541 (13%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 407
+PT RVVSI RS R+ VG + N GG++
Sbjct: 379 QPTARVVSITRRSWRQ--YVGQIAPNSVDAQNGGTQN----------------------- 413
Query: 408 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 467
V+L+ I+ R + +V + +D W E +P H + G
Sbjct: 414 ----VFVILMDKCLPKIRIRTRRAHELLSQRIVIS-VDSWPETHKYPLGHFVRNLGEVES 468
Query: 468 VEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQ----------EELL-SRKDLRN 514
V+ + A+L E+ + FS + L CLP W+ P+ + LL R+DLR+
Sbjct: 469 VQAETEALLLEHDVEYRPFSKKVLECLPPEGHDWKAPETLDDASAVSKDPLLPKRRDLRD 528
Query: 515 FCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYM 574
I +IDP D+DDAL ++L +G VGVHIADV++FV P TALD E R TSVY+
Sbjct: 529 KLICSIDPPGCVDIDDALHAKKLPNGNWEVGVHIADVTHFVKPNTALDGEGASRGTSVYL 588
Query: 575 LQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEH 634
+ ++I MLP+LL ++ SL P VDR AFS+ W+LN D+V+ ++VI+S SYE
Sbjct: 589 VDKRIDMLPMLLGTDLCSLKPYVDRFAFSVLWELNENADIVNVDFAKSVIKSREAFSYEQ 648
Query: 635 AQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLE 694
AQ ID D + L G +++L ++S LK+KR GAL L
Sbjct: 649 AQLRID---DPNQQDELTHG----------------MRALLKLSIKLKEKRINAGALNLA 689
Query: 695 NSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPA 753
+ + V + E P + + N L EEFMLLAN + A I +FP +A+LRRH +
Sbjct: 690 SPEVKVHMDSETSDPNEVEIKKLLATNSLVEEFMLLANISVARKIYDSFPQTAMLRRHAS 749
Query: 754 P---NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRP 809
P N L E ++ G+ + SS SL++ + KD Y F+ L+ +TR
Sbjct: 750 PPSTNFELLNEM--LQTRKGMSISLESSKALADSLDRCIDP-KDPY--FNTLVRIMSTRC 804
Query: 810 MQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKH 869
M A YF SG + +D+ HY LA +YTHFTSP+RRY D+V HR L A+ E L H
Sbjct: 805 MMAAQYFYSGAYS-YSDFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYEPLDLSH 863
Query: 870 R 870
R
Sbjct: 864 R 864
>gi|429750142|ref|ZP_19283202.1| ribonuclease R [Capnocytophaga sp. oral taxon 332 str. F0381]
gi|429165800|gb|EKY07832.1| ribonuclease R [Capnocytophaga sp. oral taxon 332 str. F0381]
Length = 733
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 154/431 (35%), Positives = 233/431 (54%), Gaps = 28/431 (6%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 499
V RI+EW ++S P V V G+ GE ++++IL E + + + E + +
Sbjct: 195 VLVRIEEWKDKSDSPTGVVEQVLGKPGEQNTEMHSILAEYGLPYT-YPEEVDTYAKALDV 253
Query: 500 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 559
+ +EE+ R+D+R FTIDP A D DDALS L +G VGVHIADVS++V GT
Sbjct: 254 TITEEEIAKRRDMREVLTFTIDPKDAKDFDDALSFRVLGNGNYEVGVHIADVSHYVKEGT 313
Query: 560 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 619
LD EA R+TSVY++ R +PMLP +LS SL P D+ FS +++N ++V++WI
Sbjct: 314 ILDEEAYNRATSVYLVDRVVPMLPEVLSNFACSLRPNEDKYTFSAIFEMNGKAEIVNQWI 373
Query: 620 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGW---PQL----YGQFEWSDVVRSIK 672
GRTVI S + +YE AQ II+ ++GE + P+L + +++V ++
Sbjct: 374 GRTVIHSSQRFAYEEAQAIIE-------EGSVGEHYTLQPELSITNSERTIPAEIVDAVL 426
Query: 673 SLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANK 732
+L ++++L+ KR GA+ + + F DE P ++ N L EEFMLLAN+
Sbjct: 427 TLNTLAQVLRHKRMQRGAISFDKIEVKFQLDENDNPIGVYFKESKEANKLIEEFMLLANR 486
Query: 733 TAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKL 792
AE +++ + + R H P+ KL + S+ G ++ + SL E++
Sbjct: 487 RVAEFVSK-MKKTFVYRVHDEPDAEKLEQLNGVISRFGYAINLQNKNTITHSLNTLLEEV 545
Query: 793 --KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDL 850
K + L D L A R M A+Y + GHY LAF YTHFTSP+RRYPD+
Sbjct: 546 KGKKEQNLVDTL---AIRSMAKAAYSTK-------NIGHYGLAFDDYTHFTSPIRRYPDV 595
Query: 851 VVHRTLNAALE 861
+VHR L L+
Sbjct: 596 MVHRLLQLYLD 606
>gi|21673344|ref|NP_661409.1| ribonuclease II family protein [Chlorobium tepidum TLS]
gi|21646438|gb|AAM71751.1| ribonuclease II family protein [Chlorobium tepidum TLS]
Length = 720
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 192/544 (35%), Positives = 271/544 (49%), Gaps = 84/544 (15%)
Query: 345 PTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLT 404
P +R G VV++IER R +VG L+ ++NR L PD+ I L
Sbjct: 123 PHQRCEGLVVNVIER--RLVTVVGTLH---------------RENRRFLLKPDQRKI-LP 164
Query: 405 PTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGR 464
H +P K+ + GD + EL + S QA V+ + G
Sbjct: 165 EIH------------IPLKAAKKAKAGDKVLAGELEFLK-------SGTIQARVIEILGT 205
Query: 465 GGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPST 524
GE + +++AI I + F PE L+ V + E+L R D+R+ +FTIDP
Sbjct: 206 AGESQVEVSAIARGLGIDET-FEPELLTFAEKVREAITDEDLKERLDIRDKDVFTIDPVD 264
Query: 525 ATDLDDALSIERLSDGIS-RVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
A D DDALSIE L +G +VGVHIADVS++V +ALD EA+ R+TSVY++ R IPMLP
Sbjct: 265 AKDFDDALSIETLGNGGGYKVGVHIADVSHYVPENSALDKEARKRATSVYLVDRVIPMLP 324
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKF 643
LSE+V SLNPGVDRLAFS+F+++ G+V +TVI S + +YE Q I+D
Sbjct: 325 SRLSEKVCSLNPGVDRLAFSVFFNITKKGEVTKFEFHKTVIHSKRRFTYEDVQQILDA-- 382
Query: 644 DVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD 703
G+G D R +++L ++SK ++ +R G L E + F
Sbjct: 383 --------GKG-----------DYFRELQALDQLSKKIRAQRMESGGLEFETEEVRFKLG 423
Query: 704 EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAF------PDSALLRRHPAPNMR 757
G P + + R D + L EEFMLLAN+T A + + P + R H AP M
Sbjct: 424 SNGEPVEVIKKERLDSHRLIEEFMLLANRTVAAYLTARYAENEKNPHPVIYRVHGAPQME 483
Query: 758 KLREFEAFCSKHGLQLDTSSSGQ-----FHQSLEQAREKLKDDYVLFDILIN-YATRPMQ 811
K++ +F K G L G+ ++L + +K++ V F L+N R M
Sbjct: 484 KVQVLASFVRKIGFDLKLDRKGKDSATVSSKALRELLQKVRGTNVEF--LVNELVLRSMS 541
Query: 812 LASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRR 871
A Y D GH+ L F YTHFTSP+RRYPDL+VHR L E E K R+
Sbjct: 542 KAVYSPLND-------GHFGLGFEHYTHFTSPIRRYPDLIVHRIL---FEYETTRKKRRK 591
Query: 872 MLPK 875
+ P+
Sbjct: 592 VTPE 595
>gi|342319090|gb|EGU11041.1| Mitotic control protein dis3 [Rhodotorula glutinis ATCC 204091]
Length = 1020
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 172/470 (36%), Positives = 241/470 (51%), Gaps = 44/470 (9%)
Query: 444 IDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP--CVPWEV 501
ID W S +P+ H + V G+ G E ++ ++L E + FS LSCLP W V
Sbjct: 459 IDRWPITSRYPEGHFVRVLGQVGSKEGEVESLLEEWEVPYRPFSSAILSCLPEEGDKWAV 518
Query: 502 P-------QEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYF 554
P + +R+DLR+ I +IDP D+DDAL +RL +G + GVHIADVS+F
Sbjct: 519 PPKGEADVKNVWRAREDLRDEIICSIDPPGCQDIDDALHAKRLPNGNIQAGVHIADVSHF 578
Query: 555 VLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDV 614
V P +D EA R T+VY++ ++I MLP LL + SL P V+RLAFS+ W+L+ ++
Sbjct: 579 VHPDNPMDAEAASRGTTVYLVDKRIDMLPSLLGTNLCSLRPYVERLAFSVIWELDDDANI 638
Query: 615 VDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSL 674
VD ++VI S +YE AQ D D ++ L EG I+ L
Sbjct: 639 VDVRFTKSVIASKEAFTYEAAQRRKD---DKSLTDPLTEG----------------IRLL 679
Query: 675 YEVSKILKDKRFTDGALRLENSKPVFLFD--EYGTPYDSVLSGREDLNFLFEEFMLLANK 732
++ LK KR GAL L + + + E P D + N L EEFMLLAN
Sbjct: 680 NSIAIKLKAKRMAAGALNLASPEVKIHLEQSEQSGPVDVEHKELFETNSLVEEFMLLANI 739
Query: 733 TAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSK-HGLQLDTSSSGQFHQSLEQAREK 791
+ AE I + FP +A+LRRH P + K G+ LD S+SG SL++
Sbjct: 740 SVAERIYKQFPQTAVLRRHAPPPKTNFEVLQDVLQKRRGMTLDVSTSGALADSLDKC--- 796
Query: 792 LKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDL 850
+ + F+ L+ ATR M A YFCSG + + HY LA P+YTHFTSP+RRY D+
Sbjct: 797 VDPSFPAFNTLVRIMATRCMLSAEYFCSGSLP-ASQFSHYGLASPIYTHFTSPIRRYADV 855
Query: 851 VVHRTLNAALEAEKLY-------WKHRRMLPKNNHREGVRGRFLTGI-FY 892
+VHR L+AA+ L+ W + + N G +G I FY
Sbjct: 856 LVHRQLSAAISGLPLHTGLQTRAWVDKTLEVVNKRHRGAQGAARASIEFY 905
>gi|154490007|ref|ZP_02030268.1| hypothetical protein PARMER_00236 [Parabacteroides merdae ATCC
43184]
gi|423723010|ref|ZP_17697163.1| ribonuclease R [Parabacteroides merdae CL09T00C40]
gi|154089449|gb|EDN88493.1| ribonuclease R [Parabacteroides merdae ATCC 43184]
gi|409241840|gb|EKN34607.1| ribonuclease R [Parabacteroides merdae CL09T00C40]
Length = 726
Score = 256 bits (655), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 190/616 (30%), Positives = 291/616 (47%), Gaps = 87/616 (14%)
Query: 267 VDVSYEYSNCTLLSE--KGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSS 324
VD+ Y+ S+ +SE +G + +D + A M + G N P + V+
Sbjct: 69 VDILYDLSSDNFISEIDRGRYRYNDWGTTAVGTFMRRQNGKN---SFIPEDGGTPIFVAE 125
Query: 325 SQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRK 384
+N + + + P G V+ I+E +R I G L V + F +
Sbjct: 126 RNSAHALNGDKVKIQLHAKRKGADPEGEVIEILE--SQRRLITGKLQVTRGFAF------ 177
Query: 385 DAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDL--PDSIKKRLEEGDATIEMELVAA 442
L D+ L D+ P K + GD I
Sbjct: 178 --------LITEDK----------------TLANDIFIPKDKLKGGKSGDKAI------V 207
Query: 443 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVP 502
RI EW EE+ P V+ + G G+ + ++NAIL E + + + +P
Sbjct: 208 RITEWPEEAKNPLGEVVDILGTAGDNDAEMNAILAEFDLPYK-YPANVEKAAEKISDAIP 266
Query: 503 QEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALD 562
+EE+ R+D R FTIDP A D DDALS +L +G VGVHIADV+Y+V P + +D
Sbjct: 267 EEEIAKREDFRGVTTFTIDPKDAKDFDDALSARKLDNGNWEVGVHIADVTYYVKPESLID 326
Query: 563 IEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRT 622
EA R+TSVY++ R IPMLP L ++ SL P ++L FS+ ++LN ++ I RT
Sbjct: 327 REAFSRATSVYLVDRTIPMLPERLCNQICSLRPNEEKLCFSVIFELNKNAEIQQSHITRT 386
Query: 623 VIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILK 682
+I+S + +YE AQ +I+ GEG E+ + + ++ L ++ L+
Sbjct: 387 IIKSDRRFTYEEAQAVIE----------TGEG--------EYKEEILALNGL---AQKLR 425
Query: 683 DKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARA- 741
D+RF DGA+ + + F DE G P + + ++ N L EEFMLLAN+T AE I ++
Sbjct: 426 DRRFKDGAIAFDRYEVKFDIDENGKPLGTYIKESKEANKLIEEFMLLANRTVAEFIGKSK 485
Query: 742 --FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREKLKD 794
+ + R H P+ KLR+F AF S+ G ++ T S ++ L+ + K ++
Sbjct: 486 NKTKKTFVYRIHEQPDPEKLRDFSAFISRFGYKMRTEGTKTDISKGINKLLDSVQGKPEE 545
Query: 795 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 854
+ V A R MQ A Y + GHY LA YTHFTSP+RRYPD++VHR
Sbjct: 546 NLVE-----TLAIRSMQKAHYTTD-------NIGHYGLAMDYYTHFTSPIRRYPDMMVHR 593
Query: 855 TLNAALEAEKLYWKHR 870
L L + K++
Sbjct: 594 LLERYLAGGRSVIKNK 609
>gi|156845640|ref|XP_001645710.1| hypothetical protein Kpol_1043p42 [Vanderwaltozyma polyspora DSM
70294]
gi|156116377|gb|EDO17852.1| hypothetical protein Kpol_1043p42 [Vanderwaltozyma polyspora DSM
70294]
Length = 988
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 195/562 (34%), Positives = 273/562 (48%), Gaps = 78/562 (13%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 407
+PT RVV+I RS R+ VG + N GG++
Sbjct: 374 QPTARVVAIPRRSWRQ--YVGQIAPNSVDTQTGGTQN----------------------- 408
Query: 408 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 467
V+L+ I+ R + +V + ID W FP H + G E
Sbjct: 409 ----VFVILMDKCLPKIRIRTRRATELLSKRIVVS-IDSWPSNHKFPLGHFVRNLGGVEE 463
Query: 468 VEPQINAILYENAICCSGFSPESLSCLP--CVPWEVP----------QEELLSRK-DLRN 514
+ + A+L E+ + FS + L CLP W+ P ++ LL ++ DLR+
Sbjct: 464 AQAETEALLLEHDVEYRPFSKKVLECLPEEGHDWKAPVDLKSQDAIAKDPLLQKRVDLRD 523
Query: 515 FCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYM 574
I +IDP D+DDAL ++L +G VGVHIADV++FV GT LD E R TSVY+
Sbjct: 524 KLICSIDPPGCVDIDDALHAKKLPNGHFEVGVHIADVTHFVKAGTPLDAEGASRGTSVYL 583
Query: 575 LQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEH 634
+ ++I MLP+LL ++ SL P VDR AFS+ W+L+ D+V ++VIRS SYE
Sbjct: 584 VDKRIDMLPMLLGTDLCSLKPYVDRFAFSVIWELDENADIVKVDFSKSVIRSREAFSYEQ 643
Query: 635 AQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLE 694
AQ ID K + TLG +++L ++S LK KR GAL L
Sbjct: 644 AQLRIDDKNQTDEL-TLG------------------MRALLDLSIKLKQKRLDAGALNLA 684
Query: 695 NSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPA 753
+ + V + E P + + N L EEFMLLAN + A I +FP +A+LRRH A
Sbjct: 685 SPEVKVHMDSETSDPGEVEIKKLLATNSLVEEFMLLANISVARKIYDSFPQTAMLRRHAA 744
Query: 754 P---NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRP 809
P N L E + GL + SS SL++ +K KD Y F+ L+ +TR
Sbjct: 745 PPSTNFEILNEM--LQKRKGLSISLESSKALADSLDRCVDK-KDPY--FNTLVRIMSTRC 799
Query: 810 MQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKH 869
M A YF SG + +D+ HY LA +YTHFTSP+RRY D+V HR L A+ E L H
Sbjct: 800 MMAAQYFYSGAYS-YSDFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYEPLDLSH 858
Query: 870 R-----RMLPKNNHREGVRGRF 886
R M+ KN +R +F
Sbjct: 859 RDKNKMEMICKNINRRHRNAQF 880
>gi|407036449|gb|EKE38169.1| exosome complex exonuclease, putative [Entamoeba nuttalli P19]
Length = 901
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 173/518 (33%), Positives = 256/518 (49%), Gaps = 55/518 (10%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 407
+PTG++V II+R+ W G ++++ + S+ + PT
Sbjct: 312 KPTGKIVGIIKRN--------------WKPLPGYIKQESSGSYST-------NLLFLPTD 350
Query: 408 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 467
++P P IK R A + + + ID W+ S +P H + G G+
Sbjct: 351 KRFP---------PIRIKAR---DPAKLASQRILVLIDAWDTTSKYPTGHYVATLGNVGD 398
Query: 468 VEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATD 527
+ AIL + I F L CLP +P+E+ ++ L R D R + +IDP TD
Sbjct: 399 KASETEAILELHEIPHYEFPEIVLKCLPVLPFEITEDYLKGRYDFRKENVCSIDPPGCTD 458
Query: 528 LDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLS 587
+DDAL + L +G +GVHIADVS FV P TALD EA R T+VY+ R+I MLP L+
Sbjct: 459 IDDALHCKILPNGNYEIGVHIADVSCFVKPHTALDEEASKRGTTVYLADRRIDMLPKPLT 518
Query: 588 EEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVES 647
E + S+ D L FS+ W+L+ +V++ + ++ S +Y AQ +ID K
Sbjct: 519 EVICSITQNTDTLTFSVVWELDKDANVINCTYHKGIVHSYRAYAYGQAQAVIDDK----- 573
Query: 648 SNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGT 707
SN S+ + ++++ +SK LK KR GAL L +S+ DE
Sbjct: 574 SNQ--------------SEYAQQLRAMLMLSKKLKQKRIDAGALMLASSEIKIEKDEQFN 619
Query: 708 PYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCS 767
P + N + EE+MLLAN A+ I AFP A+LRRHP P+
Sbjct: 620 PIGVKEYQTYETNSMVEEYMLLANVWVAKKIYDAFPHCAMLRRHPPPDEHTFEWLANVLK 679
Query: 768 KHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDW 827
G LD SSS +SL++ +D V+ I+ TR MQ A YF SG F + ++
Sbjct: 680 HKGKSLDFSSSKALSESLDKC--GTNEDPVIGKIMRILVTRCMQQAKYFSSGYFSYN-EF 736
Query: 828 GHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 865
HY LA +YTHFTSP+RRY D++VHR L A+ +++
Sbjct: 737 RHYGLAAEIYTHFTSPIRRYADVMVHRLLAQAIGFDQI 774
>gi|365989884|ref|XP_003671772.1| hypothetical protein NDAI_0H03560 [Naumovozyma dairenensis CBS 421]
gi|343770545|emb|CCD26529.1| hypothetical protein NDAI_0H03560 [Naumovozyma dairenensis CBS 421]
Length = 1012
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 189/541 (34%), Positives = 264/541 (48%), Gaps = 73/541 (13%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 407
+PT RVV+I RS W Y G N L + + +
Sbjct: 398 QPTARVVAITRRS--------------WRQYVG----QIAPNSVDLQTGGTQNVFVILMD 439
Query: 408 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 467
PK+ + + D + KR + ID W + +P H + G
Sbjct: 440 KCLPKIRIRTRRAHDLLDKR------------IVISIDSWPTDQKYPLGHFVRDLGGIET 487
Query: 468 VEPQINAILYENAICCSGFSPESLSCLPCV--PWEVP----------QEELLS-RKDLRN 514
E + A+L E+ + FS + L CLP W+ P ++ LL+ RKDLR+
Sbjct: 488 AEAETEALLLEHDVEYRPFSKKVLECLPAEGHEWKAPASLTDPASLAKDPLLANRKDLRD 547
Query: 515 FCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYM 574
I +IDP D+DDAL ++L +G VGVHIADV++FV GTALD E R TSVY+
Sbjct: 548 KLICSIDPPGCVDIDDALHAKKLPNGNWEVGVHIADVTHFVKQGTALDAEGASRGTSVYL 607
Query: 575 LQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEH 634
+ ++I MLP+LL ++ SL P VDR AFS+ W+L+S D+V ++VI+S SYE
Sbjct: 608 VDKRIDMLPMLLGTDLCSLKPYVDRFAFSVLWELDSNADIVKVDFTKSVIKSREAFSYEQ 667
Query: 635 AQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLE 694
AQ ID D ++ L +G +++L ++S LK KR +GAL L
Sbjct: 668 AQLRID---DPNQTDDLTQG----------------MRALLQLSIKLKQKRLDNGALNLA 708
Query: 695 NSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPA 753
+ + V + E P + + N L EEFMLLAN + A I AFP +A+LRRH A
Sbjct: 709 SPEVKVHMDSETSDPGEVEIKKLLATNSLVEEFMLLANISVARKIYDAFPQTAMLRRHAA 768
Query: 754 P---NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRP 809
P N L E + + + SS SL++ E KD Y F+ L+ +TR
Sbjct: 769 PPSTNFELLNEM--LHRRKNMSISLESSKALADSLDRC-EDPKDPY--FNTLVRIMSTRC 823
Query: 810 MQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKH 869
M A YF SG + D+ HY LA +YTHFTSP+RRY D+V HR L A+ E L H
Sbjct: 824 MMAAQYFYSGAYS-YPDFKHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYEPLSLSH 882
Query: 870 R 870
R
Sbjct: 883 R 883
>gi|319953015|ref|YP_004164282.1| rnase r [Cellulophaga algicola DSM 14237]
gi|319421675|gb|ADV48784.1| RNAse R [Cellulophaga algicola DSM 14237]
Length = 729
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 160/437 (36%), Positives = 225/437 (51%), Gaps = 26/437 (5%)
Query: 429 EEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSP 488
E+GD I +EW +++ P + V G+ GE +I++IL E + F
Sbjct: 185 EDGDKVI------VEYNEWPDKTDSPYGTITQVLGKPGEHNTEIHSILAEYGLPYE-FPV 237
Query: 489 ESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHI 548
E + + EE+ R+D+R+ FTIDP A D DDALS E L +G +G+HI
Sbjct: 238 EVEQFANDLDTSIKPEEIAKRRDMRDTLTFTIDPRDAKDFDDALSFEVLDNGNFEIGIHI 297
Query: 549 ADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDL 608
ADVS+++ P T +D EA R+TSVY++ R +PMLP +LS SL P ++ FS +++
Sbjct: 298 ADVSHYLTPDTVMDDEAYERATSVYLVDRVVPMLPEVLSNNACSLRPHEEKYTFSAIFEI 357
Query: 609 NSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWS-DV 667
+ V+ W GRTVI S + SYE AQ II+ K N++ E +E S +V
Sbjct: 358 DKKAHVIKEWFGRTVINSNERFSYEEAQHIIENKV-----NSIPEDISIRAAAYEVSEEV 412
Query: 668 VRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFM 727
V + L E++KI++ +R GA+ + + F G P +D N L EEFM
Sbjct: 413 VNATLKLDELAKIMRSRRMNAGAISFDKVEVRFNLTPEGEPESVYFKEAKDANKLIEEFM 472
Query: 728 LLANKTAAEVIARAFPDSALLRR-HPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLE 786
LLAN+ AE I + P+ + R H PN KL S+ G +LD S SL
Sbjct: 473 LLANRKVAEFIGKQKPEKTFVYRVHDEPNEEKLMALNGIISRFGHKLDFKSKKTISSSLN 532
Query: 787 QARE--KLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPL 844
Q E K K + + D L A R M A Y + GHY LAF YTHFTSP+
Sbjct: 533 QLLEDVKGKGEQNMVDTL---AIRTMSKAIYTTD-------NIGHYGLAFDYYTHFTSPI 582
Query: 845 RRYPDLVVHRTLNAALE 861
RRYPD++VHR L L+
Sbjct: 583 RRYPDVMVHRLLQHYLD 599
>gi|393780515|ref|ZP_10368727.1| ribonuclease R [Capnocytophaga sp. oral taxon 412 str. F0487]
gi|392608243|gb|EIW91098.1| ribonuclease R [Capnocytophaga sp. oral taxon 412 str. F0487]
Length = 743
Score = 256 bits (654), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 157/433 (36%), Positives = 230/433 (53%), Gaps = 32/433 (7%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVP 498
V RI++W ++S P V + G+ GE ++++IL E + + PE + +
Sbjct: 204 VIVRIEDWKDKSDSPMGVVEQILGKPGEQTTEMHSILAEYGLPYT--YPEEVEAFAKNLD 261
Query: 499 WEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPG 558
+ EE+ R+D+R FTIDP A D DDALS + L +G +GVHIADVS++V G
Sbjct: 262 LSITDEEIARRRDMRETLTFTIDPRDAKDFDDALSFKVLENGNYEIGVHIADVSHYVKEG 321
Query: 559 TALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW 618
T LD EA R+TSVY++ R +PMLP +L SL P D+ FS +++N +VVD W
Sbjct: 322 TILDEEAYNRATSVYLVDRVVPMLPEILCNFACSLRPDEDKYTFSAVFEMNKKAEVVDIW 381
Query: 619 IGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSD--------VVRS 670
IGRTV S + +YE AQ +I+ +GEG+ + + +D VV +
Sbjct: 382 IGRTVTHSSFRFAYEEAQSVIE-------QAKVGEGYT-IPAETSITDKERAVPAEVVEA 433
Query: 671 IKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLA 730
I +L +++ L+ KR GA+ + + F DE G P ++ N L EEFMLLA
Sbjct: 434 ILTLNTLAEKLRGKRMRLGAITFDKVEVKFDLDENGNPTGVYFKESKEANKLIEEFMLLA 493
Query: 731 NKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQARE 790
N+ AE +A+ + + R H P+ KL++F ++ G LD + SL E
Sbjct: 494 NRKVAEYVAK-MKKTFVYRVHDEPDAEKLQQFNTVINRFGYSLDLKNRQTTTDSLNNLLE 552
Query: 791 KL--KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYP 848
++ K + L D L A R M A+Y + GHY LAF YTHFTSP+RRYP
Sbjct: 553 EVKGKKEQNLVDTL---AIRSMAKATYTTK-------NIGHYGLAFDYYTHFTSPIRRYP 602
Query: 849 DLVVHRTLNAALE 861
D++VHR L L+
Sbjct: 603 DVMVHRLLQLYLD 615
>gi|170095541|ref|XP_001878991.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646295|gb|EDR10541.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1000
Score = 256 bits (653), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 180/535 (33%), Positives = 258/535 (48%), Gaps = 69/535 (12%)
Query: 347 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNY--KGGSRKDAKKNRSSLSVPDREYIQLT 404
K+PTGR+V +I+R+ W Y S N +SLS+ + + T
Sbjct: 374 KQPTGRIVGVIKRN--------------WRAYVCHIDSTSLTSSNATSLSL---QTVFAT 416
Query: 405 PTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGR 464
P P++ + + P I ++ + ID W+ S +P+ H + G+
Sbjct: 417 PVSRLLPRIRLRTRQAPILIGQK------------ILVTIDRWDTTSRYPEGHFVRALGK 464
Query: 465 GGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQE-----ELLSRKDLRNFCI 517
E + ++L E + F L CLP W VP + E R+DLR I
Sbjct: 465 VESKEAEQESLLLEFEVPYRPFGKAILDCLPPQGEQWVVPPKSPDSPEWKDREDLRGLII 524
Query: 518 FTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 577
+IDP D+DDAL +L +G GVHIADVS+FV P +D EA R T+VY++ +
Sbjct: 525 CSIDPPNCQDIDDALHARKLPNGNIEAGVHIADVSHFVHPDNPMDSEAASRGTTVYLVDK 584
Query: 578 KIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQD 637
+I MLP LL + SL P V+RLAFS W++ ++V+ ++VI S +YE AQ
Sbjct: 585 RIDMLPSLLGTNLCSLRPFVERLAFSAIWEMTPEAEIVNVRFTKSVIASKAAFTYEEAQI 644
Query: 638 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 697
D + ++ +SI+ L ++ LK R GAL L + +
Sbjct: 645 RKDDP-------------------HQQDELTQSIRLLNSLALKLKAGRMAAGALNLASPE 685
Query: 698 PVFLFD--EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH---P 752
D E P D + N L EEFMLLAN + A I FP +A+LRRH P
Sbjct: 686 VKIQLDTSESSDPIDVEQKELRETNSLVEEFMLLANISVARKIQETFPQTAVLRRHLPPP 745
Query: 753 APNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQ 811
N KL++ + G++LD SSSG SL+ + + F+ L+ ATR M
Sbjct: 746 RTNFEKLQDI--LMKRKGMKLDVSSSGALAASLDLC---VDPELPAFNTLVRIMATRCML 800
Query: 812 LASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
A YFCSG DT +GHY LA P+YTHFTSP+RRY D++ HR L AA+ L+
Sbjct: 801 SAEYFCSGSVARDT-FGHYGLASPIYTHFTSPIRRYADVLAHRQLAAAIGYTPLH 854
>gi|256819668|ref|YP_003140947.1| ribonuclease R [Capnocytophaga ochracea DSM 7271]
gi|256581251|gb|ACU92386.1| ribonuclease R [Capnocytophaga ochracea DSM 7271]
Length = 742
Score = 256 bits (653), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 158/433 (36%), Positives = 232/433 (53%), Gaps = 32/433 (7%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC-VP 498
V RI++W ++S P V + G+ GE ++++IL E + + PE + +
Sbjct: 204 VIVRIEDWKDKSDSPMGVVEQILGKPGEQTTEMHSILAEYGLPYT--YPEEVEAFAKKLD 261
Query: 499 WEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPG 558
+ EE+ R+D+R FTIDP A D DDALS + L +G +GVHIADVS++V G
Sbjct: 262 LSITDEEIARRRDMRENLTFTIDPRDAKDFDDALSFKLLENGNYEIGVHIADVSHYVKEG 321
Query: 559 TALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW 618
T LD EA R+TSVY++ R +PMLP +L SL P D+ FS +++N +VVD W
Sbjct: 322 TILDEEAYNRATSVYLVDRVVPMLPEVLCNFACSLRPDEDKYTFSAVFEMNKKAEVVDIW 381
Query: 619 IGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSD--------VVRS 670
IGRTV S + +YE AQ +I+ +GEG+ + + +D VV +
Sbjct: 382 IGRTVTHSSFRFAYEEAQSVIE-------QAKVGEGYT-IPAETSITDKERAIPAEVVEA 433
Query: 671 IKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLA 730
I +L +++ L+ KR GA+ + + F DE G P ++ N L EEFMLLA
Sbjct: 434 ILTLNTLAEKLRRKRMRLGAITFDKVEVKFDLDENGNPTGVYFKESKEANKLIEEFMLLA 493
Query: 731 NKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQARE 790
N+ AE +A+ + + R H P+ KL++F A S+ G L+ ++ SL E
Sbjct: 494 NRKVAEYVAK-MKKTFVYRVHDEPDADKLQQFNAVISRFGYSLNLNNRQTTTDSLNNLLE 552
Query: 791 KL--KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYP 848
++ K + L D L A R M A+Y + GHY LAF YTHFTSP+RRYP
Sbjct: 553 EVKGKKEQNLVDTL---AIRSMAKATYTTK-------NIGHYGLAFEYYTHFTSPIRRYP 602
Query: 849 DLVVHRTLNAALE 861
D++VHR L L+
Sbjct: 603 DVMVHRLLQLYLD 615
>gi|406605933|emb|CCH42570.1| exosome complex exonuclease [Wickerhamomyces ciferrii]
Length = 984
Score = 256 bits (653), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 196/619 (31%), Positives = 298/619 (48%), Gaps = 90/619 (14%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 407
+PTGRVV I++RS W +Y G + + + T
Sbjct: 369 QPTGRVVGIVKRS--------------WRSYVG-------------QIVENSVSKQTTNS 401
Query: 408 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 467
K + ++ + LP I+ + + ++V A ID WN S P+ H + G
Sbjct: 402 AKSCFVKLMDRSLP-RIRIKTRRAQELLGQKIVIA-IDSWNITSKNPEGHFVKSLGAADT 459
Query: 468 VEPQINAILYENAICCSGFSPESLSCLP--CVPWEVPQEE-----------LLSRKDLRN 514
V + A+L E+ + FS L CLP W+VP++ L RKD R+
Sbjct: 460 VGAETEALLLEHDVEYRPFSKNVLDCLPKEGHDWKVPEDLTDETVLKADPLLPKRKDFRD 519
Query: 515 FCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYM 574
I +IDP D+DDAL ++L +G VGVHIADV++FV G+ALD E R TSVY+
Sbjct: 520 KLICSIDPPGCVDIDDALHAKKLPNGNWEVGVHIADVTHFVKAGSALDAEGASRGTSVYL 579
Query: 575 LQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEH 634
+ ++I MLP+LL ++ SL P V+R AFS+ W+L+ ++++ +++I+S SYE
Sbjct: 580 VDKRIDMLPMLLGTDLCSLKPYVERFAFSVIWELDDDANIINVDYNKSIIKSREAFSYEQ 639
Query: 635 AQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLE 694
AQ ID K + + T+G +++L +SK LK +R GAL L
Sbjct: 640 AQLRIDDKSN-QDELTVG------------------MRALLHLSKKLKQQRLDAGALNLA 680
Query: 695 NSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPA 753
+ + V + E P + + + N L EEFMLLAN + A I FP +A+LRRH A
Sbjct: 681 SPEVKVHMDSETSDPGEVEIKKLLETNSLVEEFMLLANISVARKIFNEFPQTAMLRRHAA 740
Query: 754 P---NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRP 809
P N KL + K + + SS SL++ + KD+Y F+ L+ +TR
Sbjct: 741 PPSTNFEKLNDMLRI--KKNMSVSLESSKALADSLDRCIDP-KDEY--FNTLVRIMSTRC 795
Query: 810 MQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKH 869
M A YF SG + ++ HY LA +YTHFTSP+RRY D+V HR L AA+ E L H
Sbjct: 796 MMAAEYFSSGSY-GYPEFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAAAISYEPLDLTH 854
Query: 870 R-----RMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREA-------------LSVAAL 911
R ++ KN ++ +F + + ++ E+ + V
Sbjct: 855 RDKTKMELICKNINKRHRNAQFAGRASIEYYVGQVMKNNESTETGYVIRVFSNGIVVLVP 914
Query: 912 KYGVPCADILVNVATHCND 930
K+GV L ++ +H ND
Sbjct: 915 KFGVESLIKLEDITSHVND 933
>gi|255534171|ref|YP_003094542.1| Ribonuclease R [Flavobacteriaceae bacterium 3519-10]
gi|255340367|gb|ACU06480.1| Ribonuclease R [Flavobacteriaceae bacterium 3519-10]
Length = 718
Score = 256 bits (653), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 154/430 (35%), Positives = 228/430 (53%), Gaps = 35/430 (8%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 499
V ++ +W P+ ++ V G GE E +I++IL E + S F E +
Sbjct: 194 VVVKMTDWKSGEKNPEGEIIKVLGAPGEHETEIHSILAEYGLPYS-FPAEVEKEADDIDR 252
Query: 500 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 559
+ E+ R+D+R C FTIDP A D DDALSI++L++G +GVHIADVS++V PGT
Sbjct: 253 TIHDSEVAKRRDMRGICTFTIDPKDAKDFDDALSIQKLNNGNWEIGVHIADVSHYVQPGT 312
Query: 560 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 619
LD EA R+TSVY++ R +PMLP +LS +V SL P D+ FS ++++ DVV+ W
Sbjct: 313 LLDDEAYDRATSVYLVDRVVPMLPEVLSNDVCSLRPNEDKYTFSAVFEMDENADVVNEWF 372
Query: 620 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 679
GRTVI S + +YE AQ+ I+ G G D+ I +L ++K
Sbjct: 373 GRTVIHSDRRFAYEEAQERIE----------TGTG-----------DLAEEILTLDRLAK 411
Query: 680 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 739
IL+ +R +GA+ + S+ F DE P +D N L EEFMLLAN+ +E I+
Sbjct: 412 ILRKERIRNGAITFDRSEVRFNLDENSEPIGVYFKISKDSNHLIEEFMLLANRKVSEFIS 471
Query: 740 ---RAFP--DSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 794
+ P ++ + R H P+ KL F G Q+D +++ + +SL + + +K
Sbjct: 472 LNRKGEPTANTFIYRIHDDPDPTKLEALRDFVGTFGYQMDLANTKKVAESLNRLLQDVKG 531
Query: 795 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 854
+++ A R M A Y + GHY L F Y+HFTSP+RRYPDL+ HR
Sbjct: 532 KGEE-NMIETLAMRSMSKAVYSTN-------PIGHYGLGFDFYSHFTSPIRRYPDLIAHR 583
Query: 855 TLNAALEAEK 864
L L+ K
Sbjct: 584 LLQHYLDGGK 593
>gi|349605179|gb|AEQ00502.1| DIS3-like exonuclease 1-like protein, partial [Equus caballus]
Length = 646
Score = 256 bits (653), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 150/414 (36%), Positives = 233/414 (56%), Gaps = 9/414 (2%)
Query: 457 HVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDL 512
H + V GR G++E +I IL EN+I FS + +P PW+V E+ R+DL
Sbjct: 1 HFVRVLGRIGDLEAEIATILAENSISVVPFSEAQMCEMPVNTPENPWKVNPEDERERRDL 60
Query: 513 R-NFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTS 571
R +F+IDP D+DD LS+ L +G +GVHIADV++FV P + +DIEA+ R+T+
Sbjct: 61 RKTHLVFSIDPKGCEDVDDTLSVRTLHNGNLELGVHIADVTHFVAPNSYIDIEARTRATT 120
Query: 572 VYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLN-SAGDVVDRWIGRTVIRSCCKL 630
Y+ R+ MLP +LS ++ SL GVDR A S+ W+L+ ++ ++ W GRT+IRS KL
Sbjct: 121 YYLADRRYDMLPSVLSADLCSLLGGVDRYAVSVMWELDKTSYEIKKVWYGRTIIRSAYKL 180
Query: 631 SYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGA 690
YE AQ+++DG + + + ++V +I L ++++ ++ KR GA
Sbjct: 181 FYEAAQELLDGNVSIVDDIPEFRNLDEKSREARLKELVWAIGKLTDIARHVRAKRDRCGA 240
Query: 691 LRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRR 750
L LE + DE +D + +++ E M+LAN A+ I +FP ALLR+
Sbjct: 241 LELEGVEVRVQLDEKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQ 300
Query: 751 HPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPM 810
HP P+ E G +DT S+ SL++A + +D ++ +L + AT+ M
Sbjct: 301 HPPPHQEFFSELRECAKAKGFVIDTRSNKTLADSLDKAND--PNDPIVNRLLRSMATQAM 358
Query: 811 QLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
A YF +G ++ ++ HY LA YTHFTSP+RRY D++VHR L AA+ +K
Sbjct: 359 SNALYFSTGSCAEE-EFHHYGLALDKYTHFTSPIRRYSDIIVHRLLMAAISKDK 411
>gi|347832029|emb|CCD47726.1| similar to exosome complex exonuclease exoribonuclease (Rrp44)
[Botryotinia fuckeliana]
Length = 996
Score = 256 bits (653), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 186/532 (34%), Positives = 263/532 (49%), Gaps = 69/532 (12%)
Query: 348 RPTGRVVSIIERSPRR-DGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 406
+PT RVV +++R+ R+ G V +V+Q S K +K ++ + L P
Sbjct: 382 QPTARVVGVVKRNWRQYVGHVDESSVSQ-------SVKQGRKQQT---------VFLIPM 425
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG--- 463
+ PK+ V + + + KR V ID W+ +S +P H + G
Sbjct: 426 DKRIPKIRVRTRQAGEILGKR------------VLVTIDSWDRDSRYPVGHFVRSLGELE 473
Query: 464 -RGGEVEPQINAILYENAICCSGFSPESLSCLPC------VPWEVPQEELLSRKDLRNFC 516
+G E E A+L E + F L CLP VP V +R+DLR
Sbjct: 474 TKGAETE----ALLLEYDVQYRPFPKTVLDCLPAEGHDWIVPPSVDDPGWKNRRDLRGLN 529
Query: 517 IFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQ 576
I +IDP D+DDAL L +G VGVHIADVS+FV P A+D EA +R T+VY++
Sbjct: 530 ICSIDPIGCQDIDDALHARPLPNGNYEVGVHIADVSHFVKPNNAMDAEASIRGTTVYLVD 589
Query: 577 RKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQ 636
++I MLP+LL ++ SL P V+R AFS W++ ++V+ ++VI+S SYE AQ
Sbjct: 590 KRIDMLPMLLGTDLCSLKPYVERYAFSCLWEITPDAEIVNSEYTKSVIKSREAFSYEDAQ 649
Query: 637 DIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENS 696
+D D + + L +I++L +SK K KR GAL L +
Sbjct: 650 KRVD---DASAQDEL----------------TTNIRTLLMLSKKFKQKRMDAGALSLSSP 690
Query: 697 K-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPN 755
+ V + E P D D L EEFMLLAN + A I AFP +A+LRRH AP
Sbjct: 691 EVKVEMESETSDPIDIKQKKHLDTMSLVEEFMLLANTSVAAKIYSAFPQTAMLRRHAAPP 750
Query: 756 MRKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLA 813
E K GL+L SS + +L+ + + F+ L+ ATR M A
Sbjct: 751 KTNFEELANQLKVKRGLELKVGSSRELADTLDGCVDPAEP---FFNTLVRIMATRCMMSA 807
Query: 814 SYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 865
YFCSG + ++ HY LA +YTHFTSP+RRY DLV HR L AA++ E L
Sbjct: 808 EYFCSGT-QAYPEFRHYGLASEIYTHFTSPIRRYADLVAHRQLAAAIDYEPL 858
Score = 40.0 bits (92), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 22/111 (19%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 145 KDDNPSHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDV 204
++D + + ++ ++S+ + ++ G + ++ V+ +N LE + +
Sbjct: 243 QEDKEARDARTSGNLYQEYYSVSKMMTGVKNGTLHQGIFNVSPYNYLEGSVNVPAFDKSL 302
Query: 205 LITGIAAQNRAVEGDFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANG 255
L+ G NR+V+GD V+I+V W + ++ I+E+ L + N
Sbjct: 303 LVLGRENINRSVQGDVVVIEVLPKDQWKE-----PSTKIIEEETLNKDENA 348
>gi|213963000|ref|ZP_03391259.1| ribonuclease R [Capnocytophaga sputigena Capno]
gi|213954341|gb|EEB65664.1| ribonuclease R [Capnocytophaga sputigena Capno]
Length = 743
Score = 256 bits (653), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 158/433 (36%), Positives = 232/433 (53%), Gaps = 32/433 (7%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC-VP 498
V RI++W ++S P V + G+ GE ++++IL E + + PE + +
Sbjct: 204 VIVRIEDWKDKSDSPMGVVEQILGKPGEQTTEMHSILAEYGLPYT--YPEEVEAFAKKLD 261
Query: 499 WEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPG 558
+ EE+ R+D+R FTIDP A D DDALS + L +G +GVHIADVS++V G
Sbjct: 262 LSITDEEIARRRDMRQTLNFTIDPRDAKDFDDALSFKVLENGNYEIGVHIADVSHYVKEG 321
Query: 559 TALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW 618
T LD EA R+TSVY++ R +PMLP +L SL P D+ FS +++N +VVD W
Sbjct: 322 TILDEEAYNRATSVYLVDRVVPMLPEILCNFACSLRPDEDKYTFSAVFEMNKKAEVVDIW 381
Query: 619 IGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSD--------VVRS 670
IGRTV S + +YE AQ +I+ +GEG+ + + +D VV +
Sbjct: 382 IGRTVTHSSFRFAYEEAQSVIE-------QAKVGEGYT-IPAETSITDKERAVPANVVEA 433
Query: 671 IKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLA 730
I +L +++ L+ KR GA+ + + F DE G P ++ N L EEFMLLA
Sbjct: 434 ILTLNTLAEKLRSKRMRLGAITFDKVEVKFDLDENGNPTGVYFKESKEANKLIEEFMLLA 493
Query: 731 NKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQARE 790
N+ AE +A+ + + R H P+ KL++F A S+ G L+ ++ SL E
Sbjct: 494 NRKVAEYVAK-MKKTFVYRVHDEPDADKLQQFNAVISRFGYSLNLNNRQTTTDSLNNLLE 552
Query: 791 KL--KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYP 848
++ K + L D L A R M A+Y + GHY LAF YTHFTSP+RRYP
Sbjct: 553 EVKGKKEQNLVDTL---AIRSMAKATYTTK-------NIGHYGLAFDYYTHFTSPIRRYP 602
Query: 849 DLVVHRTLNAALE 861
D++VHR L L+
Sbjct: 603 DVMVHRLLQLYLD 615
>gi|444510372|gb|ELV09589.1| DIS3-like exonuclease 2 [Tupaia chinensis]
Length = 447
Score = 255 bits (652), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 130/288 (45%), Positives = 175/288 (60%), Gaps = 5/288 (1%)
Query: 579 IPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDI 638
+PMLP LL EE+ SLNP D+L FS+ W L G ++ W GRT+I SC KLSYEHAQ +
Sbjct: 9 VPMLPRLLCEELCSLNPMTDKLTFSVIWTLTPEGKILAEWFGRTIIHSCAKLSYEHAQSM 68
Query: 639 IDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKP 698
ID + E P + + +V +++ +L+ ++K L+ +RF DGALRL+ K
Sbjct: 69 IDSP----TETVPEEELPAISPEHSSKEVHQAVLNLHRIAKQLRRQRFVDGALRLDQVKL 124
Query: 699 VFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMR 757
F D E G P + D N L EEFMLLAN A I RAFP ALLRRHP P ++
Sbjct: 125 AFTLDHETGLPQGCHVYEYRDSNKLVEEFMLLANMAVAHKIHRAFPTRALLRRHPPPQVK 184
Query: 758 KLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFC 817
L + E FC + GL +D SS+G ++SL + K ++L N +RPMQ+A YFC
Sbjct: 185 MLEDLEEFCDQMGLSMDFSSAGALNKSLTETFGDDKYSLARKEVLTNMCSRPMQMAVYFC 244
Query: 818 SGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 865
SG +D + HYAL P+YTHFTSP+RR+ D++VHR L AAL ++L
Sbjct: 245 SGVLRDLVQFRHYALNVPLYTHFTSPIRRFADVLVHRLLAAALGYQEL 292
>gi|167387139|ref|XP_001738038.1| exosome complex exonuclease RRP44 [Entamoeba dispar SAW760]
gi|165898904|gb|EDR25648.1| exosome complex exonuclease RRP44, putative [Entamoeba dispar
SAW760]
Length = 901
Score = 255 bits (652), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 174/518 (33%), Positives = 254/518 (49%), Gaps = 55/518 (10%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 407
+PTG++V II+R+ W G ++++ N S+ + PT
Sbjct: 312 KPTGKIVGIIKRN--------------WKPLPGYIKQESSGNYST-------NLLFLPTD 350
Query: 408 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 467
++P P IK R A + + + ID W+ S +P H + G G+
Sbjct: 351 KRFP---------PIRIKAR---DPAKLASQRILVLIDAWDTTSKYPTGHYVATLGNVGD 398
Query: 468 VEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATD 527
+ AIL + I F L CLP +P+E+ + L R D R + +IDP TD
Sbjct: 399 KASETEAILELHEIPHYEFPEIVLKCLPLLPFEITDDYLKGRYDFRKENVCSIDPPGCTD 458
Query: 528 LDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLS 587
+DDAL + L +G +GVHIADVS FV P TALD EA R T+VY+ R+I MLP L+
Sbjct: 459 IDDALHCKILPNGNYEIGVHIADVSCFVKPHTALDEEAAKRGTTVYLADRRIDMLPKPLT 518
Query: 588 EEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVES 647
E + S+ D L FS+ W+L+ +V++ + ++ S +Y AQ +ID K
Sbjct: 519 EVICSITQNTDTLTFSVVWELDKNANVINCTYHKGIVHSYRAYAYGQAQAVIDDK----- 573
Query: 648 SNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGT 707
SN S+ + ++ + +SK LK KR GAL L +S+ DE
Sbjct: 574 SNQ--------------SEYAQQLRVMLMLSKKLKQKRIDAGALMLASSEIKIEKDEQFN 619
Query: 708 PYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCS 767
P + N + EE+MLLAN A+ I AFP A+LRRHP P+
Sbjct: 620 PIGVKEYQTYETNSMVEEYMLLANVWVAKKIYDAFPHCAMLRRHPPPDEHTFEWLANVLK 679
Query: 768 KHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDW 827
G LD SSS +SL++ +D V+ I+ TR MQ A YF SG F + ++
Sbjct: 680 HKGKSLDFSSSKALSESLDKC--GTNEDPVVGRIMRILVTRCMQQAKYFSSGYFSYN-EF 736
Query: 828 GHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 865
HY LA +YTHFTSP+RRY D++VHR L A+ +++
Sbjct: 737 RHYGLAAEIYTHFTSPIRRYADVMVHRLLAQAIGFDQI 774
>gi|358388849|gb|EHK26442.1| hypothetical protein TRIVIDRAFT_167067, partial [Trichoderma virens
Gv29-8]
Length = 986
Score = 255 bits (652), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 216/729 (29%), Positives = 339/729 (46%), Gaps = 129/729 (17%)
Query: 150 SHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGI 209
S + ++ ++ +++ + ++ G + ++ V+ +N LE K+ +LI G
Sbjct: 243 SFKQSSQQPLYPEYYTSSRMMTGVKAGLLHQGIFNVSPYNYLEGSIKVPAFPKPLLILGR 302
Query: 210 AAQNRAVEGDFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDV 269
NR+++GD V++++ W S ++ I+E+ + N + + D
Sbjct: 303 ENINRSIDGDVVVVELLPQDQWK-----SPSTKIIEEDTITKNEN------ADTEERQD- 350
Query: 270 SYEYSNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQND 329
+S+K ER+ E+V +Q+
Sbjct: 351 --------FVSDK------------------ERKALQ-------------EEVKRTQKAS 371
Query: 330 GMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKG---GSRKDA 386
G N ++ PT +VV +++R+ R+ VG ++ + KG G R D+
Sbjct: 372 GENQLQ-------------PTAKVVGVVKRNWRQ--YVGHIDPST--ASKGPSQGRRLDS 414
Query: 387 KKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDE 446
+ L P K PK+ + + + + + KRL LV +D
Sbjct: 415 --------------VFLIPMDKKIPKIRLRTRQVSELLGKRL----------LVT--VDS 448
Query: 447 WNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP--CVPWEVPQE 504
W+ +S P H++ G + A+L E + F L CLP W VP+
Sbjct: 449 WDRDSRHPVGHLVRSLGELETKAAETEALLLEWDVQYRPFPKTVLDCLPKEGHDWRVPEN 508
Query: 505 E----LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 560
+ R+DLR+ I +IDP D+DDAL L +G VGVHIADVS+FV P A
Sbjct: 509 KEDPGWRDREDLRDLLICSIDPPGCQDIDDALHARLLPNGNYEVGVHIADVSHFVKPANA 568
Query: 561 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIG 620
+D EA +R T+VY++ ++I MLP+LL ++ SL P V+R AF++ W+L+ D+V+
Sbjct: 569 MDTEASIRGTTVYLVDKRIDMLPMLLGTDLCSLKPYVERFAFTVIWELDENADIVNVRFT 628
Query: 621 RTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKI 680
++VI+S SYE AQ ID + D+ + ++ L +SK
Sbjct: 629 KSVIKSREAFSYEQAQLRID-------------------DNSQQDDLTKGMRMLLMLSKK 669
Query: 681 LKDKRFTDGALRLENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 739
LK KR GAL L + + V + E P D D N L EEFML AN + A I
Sbjct: 670 LKKKRMDAGALSLSSPEIKVHMESESSDPIDVKTKELLDTNSLVEEFMLFANVSVAAKIY 729
Query: 740 RAFPDSALLRRHPAPNMRKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVL 798
AFP +A+LRRH AP E + K GL+L T SS SL++ ++ KD +
Sbjct: 730 EAFPQTAILRRHGAPPKTNFDELADQLRIKRGLELRTDSSKALADSLDKCVDE-KDPF-- 786
Query: 799 FDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLN 857
F+ L+ ATR M A YFCSG + ++ HY LA +YTHFTSP+RRY DL+ HR L
Sbjct: 787 FNTLVRIMATRCMMSAEYFCSGT-QAYPEFRHYGLASEIYTHFTSPIRRYADLLAHRQLA 845
Query: 858 AALEAEKLY 866
AA+ E ++
Sbjct: 846 AAIGYEAVH 854
>gi|376316415|emb|CCF99807.1| ribonuclease R [uncultured Flavobacteriia bacterium]
Length = 736
Score = 255 bits (652), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 174/527 (33%), Positives = 262/527 (49%), Gaps = 62/527 (11%)
Query: 346 TKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTP 405
+K+ G +V I+ER + + VG + + + F + S + K R+ + VP
Sbjct: 131 SKKHEGEIVEILER--KTEEFVGVIQMQKNFAFVNTSAEG--KMRTDVFVP--------- 177
Query: 406 THPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
K ++ GDA + E V +I++W E++ P V+ V G
Sbjct: 178 -------------------KNKI--GDAK-DGEKVLVKIEDWPEKADSPFGKVIKVLGMP 215
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
GE +I++IL + + F E + + ++E+ R+D+R+ FTIDP A
Sbjct: 216 GEHNTEIHSILAQYGLPHD-FPKEVEDYANNIDTSIKEDEIKKRRDMRDVLTFTIDPKDA 274
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
D DDALS ++L +G +G+HIADVS++V+PGT LD EA R+TSVY++ R +PMLP +
Sbjct: 275 KDFDDALSFQKLENGNYEIGIHIADVSHYVVPGTILDDEAYERATSVYLVDRVVPMLPEI 334
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLN-SAGDVVDRWIGRTVIRSCCKLSYEHAQDII---DG 641
LS SL P ++ FS ++L+ S+G V+D+W GRTV S + +YE AQ II +G
Sbjct: 335 LSNNACSLRPNEEKYTFSAVFELDKSSGKVLDQWFGRTVTYSDARFAYEEAQHIIETREG 394
Query: 642 KFDVESSNTLGEGWPQLYGQFEWSD-VVRSIKSLYEVSKILKDKRFTDGALRLENSKPVF 700
E S T E + +D +V + L ++KI++ +R +GA+ + + F
Sbjct: 395 TIPAEISLTGKE--------YTSTDAIVEATIELDRLAKIMRKQRMKNGAISFDKVEVKF 446
Query: 701 LFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRR-HPAPNMRKL 759
DE P +D N L EEFMLLANK AE I + P + R H PN KL
Sbjct: 447 NLDEDNEPVGVFFKSSKDANKLIEEFMLLANKKVAEFIGKQTPKKTFVYRIHDEPNDEKL 506
Query: 760 REFEAFCSKHGLQLDTSSSGQFHQSLEQAREKL--KDDYVLFDILINYATRPMQLASYFC 817
+ + G +++ SL + K + L D L R M A Y
Sbjct: 507 AALQTIAGRFGYKMNYKDRKSTTASLNNLLSDVAGKKEQNLIDTL---TIRTMSKAVYST 563
Query: 818 SGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
+ GHY LAF Y+HFTSP+RRYPD++VHR L L+ K
Sbjct: 564 D-------NIGHYGLAFDYYSHFTSPIRRYPDVMVHRLLQHYLDQGK 603
>gi|399925993|ref|ZP_10783351.1| ribonuclease R [Myroides injenensis M09-0166]
Length = 639
Score = 255 bits (652), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 171/522 (32%), Positives = 261/522 (50%), Gaps = 64/522 (12%)
Query: 347 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 406
K+P VV IIER + VG + + +KN + ++ D
Sbjct: 45 KKPEAEVVEIIERYKTQ--FVGVIEI--------------QKNFAFVATAD--------- 79
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 466
PKM + +P +GD +V I++W +++ P V+ V G+ G
Sbjct: 80 ----PKMYTDIF-IPKDKVGEARDGD------VVVVEIEDWLDKADSPFGKVVKVLGKQG 128
Query: 467 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 526
E +I+AIL E + F E + + EE+ RKD+R+ FTIDP A
Sbjct: 129 EHNTEIHAILAEYGLPYD-FPKEVEDFANKLDTSINDEEVSKRKDMRDVLTFTIDPKDAK 187
Query: 527 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 586
D DDALS +L +G +G+HIADVS++V GT LD EA R+TS+Y++ R IPMLP +L
Sbjct: 188 DFDDALSFRKLENGNYEIGIHIADVSHYVQEGTKLDEEAYNRATSIYLVDRTIPMLPEVL 247
Query: 587 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK---- 642
S SL P D+ FS ++LN ++V++W GRTV S +++YE AQ II+ K
Sbjct: 248 SNFACSLRPNEDKFTFSALFELNDKAEIVNKWFGRTVTHSDQRMAYEEAQHIIETKESTI 307
Query: 643 -FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFL 701
++ + + E P+ V ++ L +++KIL+ KR DGA+ + + F
Sbjct: 308 PKEISLTGEVQEISPE---------VTEAVLKLNDLAKILRAKRMGDGAISFDKIEVKFN 358
Query: 702 FDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLRE 761
DE P ++ N L EEFMLLAN+ +E I + + + R H P+ KL
Sbjct: 359 LDENDIPTGVFFKEAKEANHLIEEFMLLANRKVSEFIGKQ-KKTFVYRVHDEPDEEKLLG 417
Query: 762 FEAFCSKHGLQLDTSSSGQFHQSLEQAREKL--KDDYVLFDILINYATRPMQLASYFCSG 819
+A ++ G +++ + G +SL + + + K + L D L R M ASY +
Sbjct: 418 LQAVIARFGHKINLKTKGGISKSLNKLLKDVNGKKEQNLVDTL---TIRCMSKASYSTN- 473
Query: 820 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 861
+ GHY LAF Y+HFTSP+RRYPD++ HR L L+
Sbjct: 474 ------NIGHYGLAFDYYSHFTSPIRRYPDVMAHRLLQHYLD 509
>gi|420150804|ref|ZP_14657959.1| ribonuclease R [Capnocytophaga sp. oral taxon 335 str. F0486]
gi|394751368|gb|EJF35141.1| ribonuclease R [Capnocytophaga sp. oral taxon 335 str. F0486]
Length = 743
Score = 255 bits (652), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 156/425 (36%), Positives = 229/425 (53%), Gaps = 16/425 (3%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC-VP 498
V RI++W ++S P V + G+ GE ++++IL E + + PE + +
Sbjct: 204 VIVRIEDWKDKSDSPMGVVEQILGKPGEQTTEMHSILAEYGLPYT--YPEEVEAFAKKLD 261
Query: 499 WEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPG 558
+ +EE+ R+D+R FTIDP A D DDALS + L +G +GVHIADVS++V G
Sbjct: 262 LSITEEEIARRRDMRETLTFTIDPRDAKDFDDALSFKVLENGNYEIGVHIADVSHYVKEG 321
Query: 559 TALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW 618
T LD EA R+TSVY++ R +PMLP +L SL P D+ FS +++N +VVD W
Sbjct: 322 TILDEEAYNRATSVYLVDRVVPMLPEILCNFACSLRPDEDKYTFSAVFEMNKKAEVVDIW 381
Query: 619 IGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVS 678
IGRTV S + +YE AQ +I+ E E + ++VV +I +L ++
Sbjct: 382 IGRTVTHSSFRFAYEEAQSVIEQAKVGEEYTIPAETSIIDKERAVPAEVVEAILTLNTLA 441
Query: 679 KILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVI 738
+ L+ KR GA+ + + F DE G P ++ N L EEFMLLAN+ AE +
Sbjct: 442 EKLRGKRMRLGAITFDKVEVKFDLDENGNPTGVYFKESKEANKLIEEFMLLANRKVAEYV 501
Query: 739 ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKL--KDDY 796
A+ + + R H P+ KL++F A S+ G L+ ++ SL E++ K +
Sbjct: 502 AK-MKKTFVYRVHDEPDADKLQQFNAVISRFGYSLNLNNRQTTTDSLNNLLEEVKGKKEQ 560
Query: 797 VLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTL 856
L D L A R M A+Y + GHY LAF YTHFTSP+RRYPD++VHR L
Sbjct: 561 NLVDTL---AIRSMAKATYTTK-------NIGHYGLAFDYYTHFTSPIRRYPDVMVHRLL 610
Query: 857 NAALE 861
L+
Sbjct: 611 QLYLD 615
>gi|315225125|ref|ZP_07866942.1| ribonuclease R [Capnocytophaga ochracea F0287]
gi|420159399|ref|ZP_14666202.1| ribonuclease R [Capnocytophaga ochracea str. Holt 25]
gi|314944808|gb|EFS96840.1| ribonuclease R [Capnocytophaga ochracea F0287]
gi|394762233|gb|EJF44499.1| ribonuclease R [Capnocytophaga ochracea str. Holt 25]
Length = 743
Score = 255 bits (652), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 158/433 (36%), Positives = 232/433 (53%), Gaps = 32/433 (7%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC-VP 498
V RI++W ++S P V + G+ GE ++++IL E + + PE + +
Sbjct: 204 VIVRIEDWKDKSDSPMGVVEQILGKPGEQTTEMHSILAEYGLPYT--YPEEVEAFAKKLD 261
Query: 499 WEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPG 558
+ EE+ R+D+R FTIDP A D DDALS + L +G +GVHIADVS++V G
Sbjct: 262 LSITDEEIARRRDMRETLTFTIDPRDAKDFDDALSFKVLENGNYEIGVHIADVSHYVKEG 321
Query: 559 TALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW 618
T LD EA R+TSVY++ R +PMLP +L SL P D+ FS +++N +VVD W
Sbjct: 322 TILDEEAYNRATSVYLVDRVVPMLPEVLCNFACSLRPDEDKYTFSAVFEMNKKAEVVDIW 381
Query: 619 IGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSD--------VVRS 670
IGRTV S + +YE AQ +I+ +GEG+ + + +D VV +
Sbjct: 382 IGRTVTYSSFRFAYEEAQSVIE-------QAKVGEGYT-IPAKTSITDKERSVPAEVVEA 433
Query: 671 IKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLA 730
I +L +++ L+ KR GA+ + + F DE G P ++ N L EEFMLLA
Sbjct: 434 ILTLNALAEKLRGKRMRLGAITFDKVEVKFDLDENGNPTGVYFKESKEANKLIEEFMLLA 493
Query: 731 NKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQARE 790
N+ AE +A+ + + R H P+ KL++F A S+ G L+ ++ SL E
Sbjct: 494 NRKVAEYVAK-MKKTFVYRVHDEPDADKLQQFNAVISRFGYSLNLNNRQTTTDSLNNLLE 552
Query: 791 KL--KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYP 848
++ K + L D L A R M A+Y + GHY LAF YTHFTSP+RRYP
Sbjct: 553 EVKGKKEQNLVDTL---AIRSMAKATYTTK-------NIGHYGLAFDYYTHFTSPIRRYP 602
Query: 849 DLVVHRTLNAALE 861
D++VHR L L+
Sbjct: 603 DVMVHRLLQLYLD 615
>gi|229495883|ref|ZP_04389609.1| ribonuclease R [Porphyromonas endodontalis ATCC 35406]
gi|229317196|gb|EEN83103.1| ribonuclease R [Porphyromonas endodontalis ATCC 35406]
Length = 736
Score = 255 bits (652), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 183/561 (32%), Positives = 267/561 (47%), Gaps = 84/561 (14%)
Query: 317 DSTEKVSSSQQNDGMNAIERLSAMISSYPTK---RPTGRVVSIIERSPRRDGIVGFLNVN 373
D + +V S +N+ +A+ ++ +P K TG+VV +++R RR VG + V
Sbjct: 121 DESAEVIVSDRNNPEHALPGDRVRVALFPLKARRTRTGQVVEVLQR--RRSTYVGRVVVT 178
Query: 374 QWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDA 433
+ F+Y L DR ++L ++ K D
Sbjct: 179 KGFSY--------------LHTEDR----------ALDSRILLPREALAGAKN----NDK 210
Query: 434 TIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSC 493
I RI W P P V+ V G G+ +++AIL E + S + E+
Sbjct: 211 AI------VRIAHWGAREPEPTGEVVEVLGAAGDNNTEMHAILAEYDLPYS-YPEEAEEA 263
Query: 494 LPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSY 553
+P E+P EE+ R+D R TIDP+ A D DDALS +L G+ VGVHIADVSY
Sbjct: 264 ARQIPSEIPSEEMAKREDFREVFTLTIDPADAKDFDDALSWRKLEGGLVEVGVHIADVSY 323
Query: 554 FVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGD 613
+V PG+ +D EA R+TS+Y++ R IPMLP L ++ SL P RLAFS + LN A +
Sbjct: 324 YVTPGSVIDKEAYDRATSIYLVDRTIPMLPERLCNDLCSLRPNEARLAFSCVFVLNEAAE 383
Query: 614 VVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKS 673
V IGRT+I S + +YE AQ +ID K EG D I S
Sbjct: 384 VQSYRIGRTIIESNRRYAYEEAQQVIDTK----------EG-----------DDAEVILS 422
Query: 674 LYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKT 733
L+ ++++L+ +RF GA+ + + F+ D G P D + N L EEFMLLAN+T
Sbjct: 423 LHSLAQLLRKRRFAQGAINFSSQEVQFVLDAEGRPVDVMARPHGTANELIEEFMLLANRT 482
Query: 734 AAEVIARAFPDSA------LLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFH 782
A + +S + R H P+ KL + AF + G Q ++ S +
Sbjct: 483 VATEFGKKQRNSNGDAKTFIYRIHDLPDGDKLNQMGAFIRRFGYQFKNATEASAISKNLN 542
Query: 783 QSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTS 842
+E +++K + ++ A R M A Y + GHY LAF YTHFTS
Sbjct: 543 AVIEASQDKPEA-----TLIQTMAVRTMARAEYSTE-------NIGHYGLAFEYYTHFTS 590
Query: 843 PLRRYPDLVVHRTLNAALEAE 863
P+RRYPDL+VHR + + E
Sbjct: 591 PIRRYPDLLVHRLVARYMAGE 611
>gi|156062888|ref|XP_001597366.1| hypothetical protein SS1G_01560 [Sclerotinia sclerotiorum 1980]
gi|154696896|gb|EDN96634.1| hypothetical protein SS1G_01560 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 998
Score = 255 bits (652), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 185/531 (34%), Positives = 259/531 (48%), Gaps = 67/531 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 407
+PT RVV +++R+ R+ VG ++ + SRK ++ + L P
Sbjct: 382 QPTARVVGVLKRNWRQ--YVGHVDESSVSQSVKQSRK-------------QQTVFLIPMD 426
Query: 408 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG---- 463
+ PK+ V + + + KR V ID W+ +S +P H + G
Sbjct: 427 KRIPKIRVRTRQAGEILGKR------------VLVTIDSWDRDSRYPVGHFVRSLGELET 474
Query: 464 RGGEVEPQINAILYENAICCSGFSPESLSCLPC------VPWEVPQEELLSRKDLRNFCI 517
+G E E A+L E + F L CLP VP +R+DLR I
Sbjct: 475 KGAETE----ALLLEYDVQYRPFPKAVLDCLPAEGHDWIVPPSTDDPGWKNRRDLRGLNI 530
Query: 518 FTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 577
+IDP D+DDAL L +G VGVHIADVS+FV P A+D EA +R T+VY++ +
Sbjct: 531 CSIDPIGCQDIDDALHARPLPNGNYEVGVHIADVSHFVKPNNAMDAEASIRGTTVYLVDK 590
Query: 578 KIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQD 637
+I MLP+LL ++ SL P V+R AFS W++ ++V+ ++VI+S SYE AQ
Sbjct: 591 RIDMLPMLLGTDLCSLKPYVERYAFSCLWEITPDAEIVNAEYTKSVIKSREAFSYEDAQK 650
Query: 638 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 697
+D D + L +I++L +SK K KR GAL L + +
Sbjct: 651 RVD---DASQQDEL----------------TTNIRTLLMLSKKFKQKRMDAGALSLSSPE 691
Query: 698 -PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNM 756
V + E P D D L EEFMLLAN + A I AFP +A+LRRH AP
Sbjct: 692 VKVEMESETSDPIDIKQKKHLDTMSLVEEFMLLANTSVAAKIYSAFPQTAMLRRHAAPPK 751
Query: 757 RKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLAS 814
E K GL+L SS Q SL+ + + F+ L+ ATR M A
Sbjct: 752 TNFEELANQLKVKRGLELKVGSSRQLADSLDGCVDPTEP---FFNTLVRIMATRCMMSAE 808
Query: 815 YFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 865
YFCSG + ++ HY LA +YTHFTSP+RRY DLV HR L AA++ E L
Sbjct: 809 YFCSGT-QAYPEFRHYGLASEIYTHFTSPIRRYADLVAHRQLAAAIDYEPL 858
Score = 39.7 bits (91), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 22/110 (20%), Positives = 53/110 (48%), Gaps = 5/110 (4%)
Query: 145 KDDNPSHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDV 204
++D + + ++ ++S+ + ++ G + ++ V+ +N LE + +
Sbjct: 243 QEDKEARDARTSGNLYQEYFSVSKMMTGVKNGTLHQGIFNVSPYNYLEGSVNVPAFDKSL 302
Query: 205 LITGIAAQNRAVEGDFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEAN 254
L+ G NR+V+GD V+I+V W + ++ I+E+ +L + N
Sbjct: 303 LVLGRENINRSVQGDVVVIEVLPKDQWKE-----PSTKIIEEESLNKDEN 347
>gi|402495166|ref|ZP_10841899.1| ribonuclease R [Aquimarina agarilytica ZC1]
Length = 739
Score = 255 bits (651), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 154/432 (35%), Positives = 229/432 (53%), Gaps = 22/432 (5%)
Query: 438 ELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV 497
ELV +D+W E++ P V V G GE E +I+AIL + + F + +
Sbjct: 189 ELVLVSMDDWPEKADSPFGTVKEVLGTPGEHETEIHAILLQYGLPYE-FPKKVEEYANKL 247
Query: 498 PWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLP 557
+ +EE+ R+D+R+ FTIDP A D DDALS + L +G +G+HIADVS++V P
Sbjct: 248 DTSIQKEEIAKRRDMRDTLTFTIDPKDAKDFDDALSFKTLKNGNYEIGIHIADVSHYVKP 307
Query: 558 GTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR 617
GT LD EA R+TSVY++ R +PMLP +LS SL P ++ FS +++ +V+
Sbjct: 308 GTILDDEAYERATSVYLVDRVVPMLPEVLSNNACSLRPHEEKYTFSAVFEITPNTKIVNE 367
Query: 618 WIGRTVIRSCCKLSYEHAQDIID-GKFDVESSNTL-GEGWPQLYGQFEWSDVVRSIKSLY 675
W GRTV S + +YE AQ II+ G+ + +S +L GE + +++ ++ L
Sbjct: 368 WFGRTVTYSDARFAYEEAQQIIETGESTIPASISLTGEAYQA------SAEITEAVLKLD 421
Query: 676 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 735
E++K++++ R GAL + ++ F +E P +D N L EEFMLLANK A
Sbjct: 422 ELAKVMREARMKSGALSFDKTEVKFQLNENNEPTGVFFKTSKDANKLIEEFMLLANKKVA 481
Query: 736 EVIARAFPDSALLRR-HPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLK- 793
E I + P + R H PN KL + S+ G L+ + SL + +K
Sbjct: 482 EFIGKQTPKKTFVYRIHDEPNEEKLVALQNIVSQFGHSLNLQNKKTVTSSLNKLLSDVKG 541
Query: 794 -DDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 852
+ + D L A R M A Y + GHY L+F Y+HFTSP+RRYPD++
Sbjct: 542 QKEQNMVDTL---AIRTMSKAVYTTQ-------NIGHYGLSFDYYSHFTSPIRRYPDVMA 591
Query: 853 HRTLNAALEAEK 864
HR L L+A K
Sbjct: 592 HRLLQHYLDAGK 603
>gi|423346443|ref|ZP_17324131.1| ribonuclease R [Parabacteroides merdae CL03T12C32]
gi|409220261|gb|EKN13217.1| ribonuclease R [Parabacteroides merdae CL03T12C32]
Length = 726
Score = 255 bits (651), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 155/437 (35%), Positives = 232/437 (53%), Gaps = 42/437 (9%)
Query: 442 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEV 501
RI EW EE+ P V+ + G G+ ++NAIL E + + + +
Sbjct: 207 VRITEWPEEAKNPLGEVVDILGTAGDNNAEMNAILAEFDLPYK-YPANVEKAAEKISDAI 265
Query: 502 PQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTAL 561
P+EE+ R+D R FTIDP A D DDALS +L +G VGVHIADV+Y+V P + +
Sbjct: 266 PEEEIAKREDFRGVTTFTIDPKDAKDFDDALSARKLDNGNWEVGVHIADVTYYVKPESLI 325
Query: 562 DIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGR 621
D EA R+TSVY++ R IPMLP L ++ SL P ++L FS+ ++LN ++ I R
Sbjct: 326 DREAFSRATSVYLVDRTIPMLPERLCNQICSLRPDEEKLCFSVIFELNKNAEIQQSHITR 385
Query: 622 TVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKIL 681
T+I+S + +YE AQ +I+ GEG E+ + + ++ L ++ L
Sbjct: 386 TIIKSDRRFTYEEAQAVIE----------TGEG--------EYKEEILALNGL---AQKL 424
Query: 682 KDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARA 741
+D+RF DGA+ + + F DE G P + + ++ N L EEFMLLAN+T AE I ++
Sbjct: 425 RDRRFKDGAIAFDRYEVKFDIDENGKPLGTYIKESKEANKLIEEFMLLANRTVAEFIGKS 484
Query: 742 ---FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREKLK 793
+ + R H P+ KLR+F AF S+ G ++ T S ++ L+ + K +
Sbjct: 485 KNKTKKTFVYRIHEQPDPEKLRDFSAFISRFGYKMRTEGTKTDISKGINKLLDSVQGKPE 544
Query: 794 DDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVH 853
++ V A R MQ A Y + GHY LA YTHFTSP+RRYPD++VH
Sbjct: 545 ENLVE-----TLAIRSMQKAHYTTD-------NIGHYGLAMDYYTHFTSPIRRYPDMMVH 592
Query: 854 RTLNAALEAEKLYWKHR 870
R L L + K++
Sbjct: 593 RLLERYLAGGRSVIKNK 609
>gi|351715235|gb|EHB18154.1| Exosome complex exonuclease RRP44 [Heterocephalus glaber]
Length = 986
Score = 255 bits (651), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 183/551 (33%), Positives = 261/551 (47%), Gaps = 116/551 (21%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 406
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 363 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 399
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDAT-IEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+ P++ R+E A+ +E + ID W S +P H + G
Sbjct: 400 DKRIPRI-------------RIETRQASALEGRRIIVAIDGWPRNSRYPNGHFVKNLGDV 446
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
GE E + +L E+ + FS LS LP +PW + + +L +R+DLR+ C+ ++DP
Sbjct: 447 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITENDLKNREDLRHLCVCSVDPPGC 506
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 507 TDIDDALHCRELKNGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 566
Query: 586 LSEEVGSLNPGVD-----------------------------RLAFSIFWDLNSAGDVVD 616
LS + SL VD RLAFS W++N +++
Sbjct: 567 LSSNLCSLRCNVDRYLCMLFHKNVVFTILTGSHQQILSVFTHRLAFSCIWEMNHNAEILK 626
Query: 617 RWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 676
++VI S L+Y AQ ID S T+ + D+ S++ L +
Sbjct: 627 TRFTKSVINSKASLTYAEAQMRID-------SATMND------------DITTSLRGLNK 667
Query: 677 VSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 735
++KILK R GAL L + + F D E P D + N + EEFMLLAN + A
Sbjct: 668 LAKILKKGRIEKGALTLSSPEVRFHMDSETHDPIDLQTKELRETNSMVEEFMLLANISVA 727
Query: 736 EVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDD 795
+ I F +KH L++ T ++ SL++A E
Sbjct: 728 KKIHEGF------------------------AKHNLEIKTDTAKSLADSLDRA-ESPAFP 762
Query: 796 YVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRT 855
Y L +L ATR M A YFCSG D D+ HY LA P+YTHFTSP+RRY D++VHR
Sbjct: 763 Y-LNTLLRILATRCMMQAVYFCSG---MDNDFHHYGLASPIYTHFTSPIRRYADIIVHRL 818
Query: 856 LNAALEAEKLY 866
L A+ A+ Y
Sbjct: 819 LAVAIGADCTY 829
>gi|218258472|ref|ZP_03474839.1| hypothetical protein PRABACTJOHN_00494 [Parabacteroides johnsonii
DSM 18315]
gi|423342570|ref|ZP_17320284.1| ribonuclease R [Parabacteroides johnsonii CL02T12C29]
gi|218225444|gb|EEC98094.1| hypothetical protein PRABACTJOHN_00494 [Parabacteroides johnsonii
DSM 18315]
gi|409217487|gb|EKN10463.1| ribonuclease R [Parabacteroides johnsonii CL02T12C29]
Length = 726
Score = 255 bits (651), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 156/427 (36%), Positives = 224/427 (52%), Gaps = 42/427 (9%)
Query: 442 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEV 501
RI EW EE+ P V+ + G GE ++NAIL E + + + +
Sbjct: 207 VRITEWPEEAKNPLGEVVDILGTAGENNAEMNAILAEFNLPYK-YPVNVEKAAEKISEAI 265
Query: 502 PQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTAL 561
P+EE+ R+D R FTIDP A D DDALS +L +G VGVHIADV+Y+V P + +
Sbjct: 266 PEEEIAKREDFRGITTFTIDPKDAKDFDDALSARKLDNGNWEVGVHIADVTYYVKPESLI 325
Query: 562 DIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGR 621
D EA R+TSVY++ R IPMLP L ++ SL P ++L FS ++LN +V I R
Sbjct: 326 DREAFSRATSVYLVDRTIPMLPERLCNQICSLRPDEEKLCFSAVFELNKDAEVQQSHITR 385
Query: 622 TVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKIL 681
T+I+S + +YE AQ +I+ GEG D I L +++ L
Sbjct: 386 TIIKSDRRFTYEEAQVVIE----------TGEG-----------DYKEEILMLNSMAQKL 424
Query: 682 KDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARA 741
+D+RF DGA+ + + F DE G P + + ++ N L EEFMLLAN+T AE + ++
Sbjct: 425 RDRRFKDGAIAFDRYEVKFDIDENGKPLGTYIKESKEANKLIEEFMLLANRTVAEFVGKS 484
Query: 742 ---FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREKLK 793
+ + R H P+ KLR+F AF S+ G ++ T S ++ L+ + K +
Sbjct: 485 KNRTKKTFVYRIHEQPDPEKLRDFSAFISRFGYKMRTEGTKTDISKGINKLLDNVQGKPE 544
Query: 794 DDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVH 853
++ V A R MQ A Y + GHY LA YTHFTSP+RRYPD++VH
Sbjct: 545 ENLVE-----TLAIRSMQKAHYTTD-------NIGHYGLAMDYYTHFTSPIRRYPDMMVH 592
Query: 854 RTLNAAL 860
R L L
Sbjct: 593 RLLERYL 599
>gi|412987920|emb|CCO19316.1| predicted protein [Bathycoccus prasinos]
Length = 1147
Score = 255 bits (651), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 173/528 (32%), Positives = 269/528 (50%), Gaps = 53/528 (10%)
Query: 351 GRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKY 410
+VV I++R+ R G L++ + +++ +N + + + P K
Sbjct: 491 AKVVRIVKRNWRDRGYACALDIESCADLARKQHENSNENETEDGGGRAKRVLCVPNDRKT 550
Query: 411 PKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEP 470
PK+ + + I + + ID W SP+P+ H + G GE
Sbjct: 551 PKIRINTRHA------------HQIASQRIVVVIDAWLASSPYPEGHFVRALGEIGETAS 598
Query: 471 QINAILYENAICCSGFSPESLSCLPCVPWEVPQE--ELLSRKDLRNFCIFTIDPSTATDL 528
+ A+L E + F+P C+P +PW+V +E E R+DLRN + ++DP D+
Sbjct: 599 ETAALLLEADVDDRPFAPAVHKCVPPLPWKVTEEHIEEPKREDLRNLRVCSVDPPGCRDI 658
Query: 529 DDALSI-------ERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPM 581
DDALS + +GVHIADV+ F+ PGT +D EA R T+ Y++QR++ M
Sbjct: 659 DDALSAVVVPKNDGVEGEEEIEIGVHIADVTTFLKPGTPMDDEALRRGTTTYLVQRRLDM 718
Query: 582 LPVLLSEEVGSLNPGVDRLAFSIFWDLNSA-----GDVVDRWIGRTVIRSCCKLSYEHAQ 636
LP L+E++ SL V+RLAFS+FW ++ A DV R+ +++I+S L+Y+ AQ
Sbjct: 719 LPKPLTEDICSLRADVERLAFSVFWRVDPATMLPRKDVKPRFT-KSIIKSSKALTYQKAQ 777
Query: 637 DIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENS 696
+IID + + + SD+ ++ L +VSK L+ KR GAL L +
Sbjct: 778 EIIDDETN------------------DKSDLANDLRRLRDVSKALRAKRMEQGALTLASP 819
Query: 697 KPVF-LFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPN 755
+ F L DE P D L + N + EE MLLAN AE I+ +P ALLRRHP P
Sbjct: 820 EVRFELDDETSNPLDVSLYISRETNKMVEEMMLLANIAVAERISEHYPSFALLRRHPEPR 879
Query: 756 MRKLREFEAFCSKHGLQ--LDTSSSGQFHQSLEQAREKLKDDYVLFDILINY-ATRPMQL 812
+ GL+ ++ +S+ +SL+ +++D F+ L+ ATR M
Sbjct: 880 EKMFLPLLETVQLLGLENKINCASNKTLAESLDAC---VREDDPYFNTLLRLQATRCMST 936
Query: 813 ASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
A Y +G F + + HY LA P+YTHFTSP+RRY D++VHR L+A+L
Sbjct: 937 AKYCSTGSFPRNELY-HYGLASPLYTHFTSPIRRYADVIVHRLLSASL 983
>gi|429746220|ref|ZP_19279585.1| ribonuclease R [Capnocytophaga sp. oral taxon 380 str. F0488]
gi|429166804|gb|EKY08756.1| ribonuclease R [Capnocytophaga sp. oral taxon 380 str. F0488]
Length = 742
Score = 255 bits (651), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 157/433 (36%), Positives = 230/433 (53%), Gaps = 32/433 (7%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC-VP 498
V RI++W ++S P V + G+ GE ++++IL E + + PE + +
Sbjct: 204 VIVRIEDWKDKSDSPMGVVEQILGKPGEQTTEMHSILAEYGLPYT--YPEEVEAFAKKLD 261
Query: 499 WEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPG 558
+ EE+ R+D+R FTIDP A D DDALS + L +G +GVHIADVS++V G
Sbjct: 262 LSITDEEIARRRDMRETLTFTIDPRDAKDFDDALSFKVLENGNYEIGVHIADVSHYVKEG 321
Query: 559 TALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW 618
T LD EA R+TSVY++ R +PMLP +L SL P D+ FS +++N +VVD W
Sbjct: 322 TILDEEAYNRATSVYLVDRVVPMLPEILCNFACSLRPDEDKYTFSAVFEMNKKAEVVDIW 381
Query: 619 IGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSD--------VVRS 670
IGRTV S + +YE AQ +I+ +GEG+ + + +D VV +
Sbjct: 382 IGRTVTHSSFRFAYEEAQSVIE-------QAKVGEGYT-IPAETSITDKERSVPAEVVDA 433
Query: 671 IKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLA 730
I +L +++ L+ KR GA+ + + F DE G P ++ N L EEFMLLA
Sbjct: 434 ILTLNTLAEKLRGKRMRLGAITFDKVEVKFDLDENGNPTGVYFRESKEANKLIEEFMLLA 493
Query: 731 NKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQARE 790
N+ AE +A+ + + R H P+ KL++F ++ G LD + SL E
Sbjct: 494 NRKVAEYVAK-MKKTFVYRVHDEPDAEKLQQFNTVINRFGYSLDLKNRQTTTDSLNNLLE 552
Query: 791 KL--KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYP 848
++ K + L D L A R M A+Y + GHY LAF YTHFTSP+RRYP
Sbjct: 553 EVKGKKEQNLVDTL---AIRSMAKATYTTK-------NIGHYGLAFDYYTHFTSPIRRYP 602
Query: 849 DLVVHRTLNAALE 861
D++VHR L L+
Sbjct: 603 DVMVHRLLQLYLD 615
>gi|429755398|ref|ZP_19288055.1| ribonuclease R [Capnocytophaga sp. oral taxon 324 str. F0483]
gi|429174656|gb|EKY16129.1| ribonuclease R [Capnocytophaga sp. oral taxon 324 str. F0483]
Length = 743
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 156/434 (35%), Positives = 231/434 (53%), Gaps = 32/434 (7%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC-VP 498
V RI++W ++S P V + G+ GE ++++IL E + + PE + +
Sbjct: 204 VIVRIEDWKDKSDSPMGVVEQILGKPGEQTTEMHSILAEYGLPYT--YPEEVEAFAKKLD 261
Query: 499 WEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPG 558
+ + +E+ R+D+R FTIDP A D DDALS + L +G +GVHIADVS++V G
Sbjct: 262 FSITDDEIARRRDMRETLTFTIDPRDAKDFDDALSFKVLENGNYEIGVHIADVSHYVKEG 321
Query: 559 TALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW 618
T LD EA R+TSVY++ R +PMLP +L SL P D+ FS +++N +VVD W
Sbjct: 322 TILDEEAYNRATSVYLVDRVVPMLPEVLCNFACSLRPDEDKYTFSAVFEMNKKAEVVDIW 381
Query: 619 IGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSD--------VVRS 670
IGRTV S + +YE AQ +I+ +GEG+ + + +D VV +
Sbjct: 382 IGRTVTHSSFRFAYEEAQSVIE-------QAKVGEGYT-IPAETSITDKERAVPAEVVDA 433
Query: 671 IKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLA 730
I +L +++ L+ KR GA+ + + F DE G P ++ N L EEFMLLA
Sbjct: 434 ILTLNALAEKLRGKRMRLGAITFDKVEVKFDLDENGNPTGVYFKESKEANKLIEEFMLLA 493
Query: 731 NKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQARE 790
N+ AE +A+ + + R H P+ KL++F ++ G LD + SL E
Sbjct: 494 NRKVAEYVAK-MKKTFVYRVHDEPDAEKLQQFNTVINRFGYSLDLKNRQTTTDSLNNLLE 552
Query: 791 KL--KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYP 848
++ K + L D L A R M A+Y + GHY LAF YTHFTSP+RRYP
Sbjct: 553 EVKGKKEQNLVDTL---AIRSMAKATYTTK-------NIGHYGLAFDYYTHFTSPIRRYP 602
Query: 849 DLVVHRTLNAALEA 862
D++VHR L L+
Sbjct: 603 DVMVHRLLQLYLDG 616
>gi|345867996|ref|ZP_08819992.1| ribonuclease R [Bizionia argentinensis JUB59]
gi|344047478|gb|EGV43106.1| ribonuclease R [Bizionia argentinensis JUB59]
Length = 745
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 159/490 (32%), Positives = 237/490 (48%), Gaps = 45/490 (9%)
Query: 399 EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHV 458
EY+ + H Y +VV + I + + + + + V ++EW E+S P V
Sbjct: 149 EYVGVIQLHNNYAFVVVDSNKMYTDIFVPINKTNKAKDGDKVLVSLEEWPEKSDSPNGKV 208
Query: 459 LHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIF 518
+ V GR GE +I+AIL E + F E + + +EE+ R+D+R F
Sbjct: 209 IEVLGRPGEHNTEIHAILAEYGLPLE-FPKEVEDFANKIDTSITKEEIAKRRDMRKDLTF 267
Query: 519 TIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRK 578
TIDP A D DDALS E L +G+ +G+HIADVS+++ PGT LD EA R+TSVY++ R
Sbjct: 268 TIDPKDAKDFDDALSFEILDNGLYEIGIHIADVSHYLQPGTILDDEAYERATSVYLVDRV 327
Query: 579 IPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDI 638
+PMLP +LS SL P ++ FS + +N G+VVD W G+TV S + +YE AQ I
Sbjct: 328 VPMLPEVLSNNACSLRPNEEKYTFSAVFKMNDKGEVVDEWFGKTVTFSNARFAYEEAQAI 387
Query: 639 IDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVS-------------------- 678
I+ ++ N + + E +D+ SI + +S
Sbjct: 388 IENNAEL---NVISKA-------VEMADIDTSIPADVAISGKDYNTTKEIAFAVLKMDAF 437
Query: 679 -KILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEV 737
K ++ KR GA+ + + F D+ P +D N + EEFMLLAN+ +E
Sbjct: 438 AKKMRSKRMRSGAISFDKVEVKFELDKDANPIGVFFKSSKDANKMIEEFMLLANRKVSEF 497
Query: 738 IARAFPDSALLRR-HPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKL--KD 794
+ + P+ + R H P+ KL + + G +LD SL ++
Sbjct: 498 VGKQKPEKTFIYRVHDEPDESKLASLQNVVGRFGYKLDFKDKKSISSSLNNLLSEVVGTK 557
Query: 795 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 854
+ L D L R M A Y + GHY LAF Y+HFTSP+RRYPD++ HR
Sbjct: 558 EQNLVDTL---TIRTMSKAEYTTD-------NIGHYGLAFDYYSHFTSPIRRYPDIMAHR 607
Query: 855 TLNAALEAEK 864
L L+ EK
Sbjct: 608 LLQMYLDGEK 617
>gi|228472159|ref|ZP_04056925.1| ribonuclease R [Capnocytophaga gingivalis ATCC 33624]
gi|228276362|gb|EEK15086.1| ribonuclease R [Capnocytophaga gingivalis ATCC 33624]
Length = 732
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 161/444 (36%), Positives = 234/444 (52%), Gaps = 28/444 (6%)
Query: 429 EEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSP 488
E+GD V RI +W + P + + G+ GE + +I+AIL E + F
Sbjct: 183 EDGDK------VLVRITQWTSRANSPYGVIEKILGKPGEHDTEIHAILAEYGLPHE-FPK 235
Query: 489 ESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHI 548
E + + +EE+ R+D+R FTIDP A D DDALS + L +G +GVHI
Sbjct: 236 EVEEYAQGLDTSIKEEEIAKRRDMREVLTFTIDPRDAKDFDDALSFQVLENGNFEIGVHI 295
Query: 549 ADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDL 608
ADVS++V P T LD EA R+TSVY++ R +PMLP +LS SL P ++ FS ++L
Sbjct: 296 ADVSHYVQPNTILDDEAYQRATSVYLVDRVVPMLPEVLSNFACSLRPEEEKYTFSAIFEL 355
Query: 609 NSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEG-WPQLY-----GQF 662
+ ++ + W+GRTVIRS + +YE AQ +I+ FD L + PQ G +
Sbjct: 356 SPKAEIRNTWLGRTVIRSDARFAYEEAQAVIEA-FDTPYMEVLTDFVMPQEISIRPEGSY 414
Query: 663 EWS-DVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNF 721
S ++V +I SL +++IL++KR GA+ + + FL DE P ++ N
Sbjct: 415 TVSKEIVEAILSLNALAEILREKRMRAGAISFDKVEVKFLLDENNNPLGVYTKESKEANK 474
Query: 722 LFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQF 781
L EEFMLLAN+ AE A + + R H P+ KL + + S+ G +L+
Sbjct: 475 LIEEFMLLANRKVAEY-ASKLQKTFVYRIHDVPDEEKLLQMQGIISRFGYRLNLKDKKNI 533
Query: 782 HQSLEQAREKL--KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTH 839
S+ E++ K + L D L A R M A+Y + GHY LAF YTH
Sbjct: 534 SHSINHLLEEVHGKKEQNLVDTL---AIRSMSKAAYSTH-------NIGHYGLAFDDYTH 583
Query: 840 FTSPLRRYPDLVVHRTLNAALEAE 863
FTSP+RRYPD++VHR L L+ E
Sbjct: 584 FTSPIRRYPDVMVHRLLQRYLDKE 607
>gi|149239608|ref|XP_001525680.1| exosome complex exonuclease RRP44 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451173|gb|EDK45429.1| exosome complex exonuclease RRP44 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 990
Score = 254 bits (649), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 171/491 (34%), Positives = 251/491 (51%), Gaps = 42/491 (8%)
Query: 413 MVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQI 472
++++ K LP I+ R + + +V +D W +S +P H + G E +
Sbjct: 419 VILMDKTLP-KIRIRTRKAKEYLGQRIVVV-VDSWPSDSKYPNGHFVRALGDVESAEAET 476
Query: 473 NAILYENAICCSGFSPESLSCLPCVP--WEVPQ------EELLSRKDLRNFCIFTIDPST 524
A+L E+ + FS L CLP W VP ++L R DLR+ + +IDP
Sbjct: 477 EALLLEHDVEYRPFSKNVLDCLPKEGDNWVVPDITNTTDKQLQKRVDLRDKLVCSIDPPN 536
Query: 525 ATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPV 584
D+DDAL ++L +G VGVHIADV++FV GTALD E R TS Y++ ++I MLP+
Sbjct: 537 CVDIDDALHAQKLPNGNFEVGVHIADVTHFVKAGTALDQEGASRGTSTYLVDKRIDMLPM 596
Query: 585 LLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFD 644
LL + SL P VDR AFS+ W++++ ++++ +++I+S SYE AQ ID D
Sbjct: 597 LLGTNLCSLKPFVDRFAFSVIWEVDAEANIINVKFMKSIIKSRQAFSYEQAQARID---D 653
Query: 645 VESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFLFD 703
+ L E S++ L +SK LK KR GAL L + + V++
Sbjct: 654 ATQKDELTE----------------SMRILLRLSKKLKQKRIDAGALNLASPEVKVYMDS 697
Query: 704 EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFE 763
E P + + + N L EEFML AN + A I A+P +A+LRRH AP
Sbjct: 698 ETSDPQEVEIKKLLETNSLVEEFMLFANISVARKIYDAYPQTAMLRRHAAPPATNFETLN 757
Query: 764 AFCS--KHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGD 820
+ K+GL + SS SL++ + D Y F+ LI +TR M A YF SG
Sbjct: 758 DMLNVRKNGLSISLESSKALADSLDRCIDP-TDPY--FNTLIRIMSTRCMMAAEYFPSGS 814
Query: 821 FKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR-----RMLPK 875
+ ++ HY LA +YTHFTSP+RRY D+V HR L A+ E L HR M+ K
Sbjct: 815 Y-GYPEFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYENLDLSHRDKHKMEMIVK 873
Query: 876 NNHREGVRGRF 886
N ++ +F
Sbjct: 874 NINKRHRNAQF 884
>gi|124003005|ref|ZP_01687856.1| ribonuclease R [Microscilla marina ATCC 23134]
gi|123991655|gb|EAY31063.1| ribonuclease R [Microscilla marina ATCC 23134]
Length = 736
Score = 254 bits (649), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 155/432 (35%), Positives = 224/432 (51%), Gaps = 38/432 (8%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 499
V + EW+ E P A V V G G E +++AI+ E + F E L +
Sbjct: 206 VIVEVLEWHNEKNSPVAKVKEVLGAPGVNETEMHAIMAEFGLA-RHFPAEVLKDAEKIRG 264
Query: 500 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 559
+ + E+ R+D+R FTIDP A D DDALSI++L +G +G+HIADV+++V P +
Sbjct: 265 RITKVEIKKRRDIRETLTFTIDPENAKDFDDALSIKKLDNGNWEIGIHIADVTHYVKPDS 324
Query: 560 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 619
+D E R+TSVY++ R +PMLP LS E+ SL P D+L FS ++L+ V+ W
Sbjct: 325 KVDKEGAERATSVYLVDRVVPMLPERLSNELCSLRPHEDKLTFSAMFELDENAHVIKEWF 384
Query: 620 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 679
GRTVI S + SYE AQ+++D G G D V +++L ++K
Sbjct: 385 GRTVIHSDRRFSYEEAQEVMDS----------GNG-----------DHVDELRTLNALAK 423
Query: 680 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVI- 738
L +RF GA+ E + F DE GTP R+D + L EEFMLLAN+ AE +
Sbjct: 424 KLTAQRFEKGAMSFETVEVKFKLDENGTPIGLYTKERKDAHKLIEEFMLLANRKVAEFVF 483
Query: 739 ------ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKL 792
+A ++ + R H PN+ KL+ F F K G ++ + +SL + +
Sbjct: 484 KLPVKGTKAESNTMVYRTHDDPNVEKLKNFSGFAKKLGHEVKLNGKA-MTRSLNKLMTDI 542
Query: 793 KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 852
+D ++L A R M A Y GH+ LAF YTHFTSP+RRYPD++V
Sbjct: 543 -EDTPQQNVLQGLAIRTMAKAIYTTEA-------TGHFGLAFDHYTHFTSPIRRYPDMMV 594
Query: 853 HRTLNAALEAEK 864
HR L L+ K
Sbjct: 595 HRLLQHYLDHGK 606
>gi|116180372|ref|XP_001220035.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88185111|gb|EAQ92579.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 987
Score = 254 bits (649), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 182/532 (34%), Positives = 264/532 (49%), Gaps = 59/532 (11%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 407
+PT +VV +++R+ R+ VG ++ + RK ++ + + P
Sbjct: 376 QPTAKVVGVVKRNWRQ--YVGHIDQSSVSQSAQQGRK-------------QDTVFVIPMD 420
Query: 408 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 467
K P++ + + + + + KR + ID W+ S P H + G
Sbjct: 421 KKIPRIRLRTRQVAELVGKR------------ILITIDAWDRGSRHPTGHFVRSLGELET 468
Query: 468 VEPQINAILYENAICCSGFSPESLSCLP--CVPWEVPQEE----LLSRKDLRNFCIFTID 521
+ A+L E + F L CLP W+VP+ R+DLR I +ID
Sbjct: 469 KAAETEALLLEYDVQYRPFPKTVLDCLPKEGHDWKVPESMEDPGWKDREDLRGLLICSID 528
Query: 522 PSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPM 581
P D+DDAL L +G + VGVHIADVS+FV P A+D EA +R T+VYM+ ++I M
Sbjct: 529 PVGCQDIDDALHSRPLPNGNTEVGVHIADVSHFVKPNNAMDAEASIRGTTVYMVDKRIDM 588
Query: 582 LPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDG 641
LP+LL ++ SL P V+R AFS+ W+L+ D+V+ ++VI+S SYE AQ +D
Sbjct: 589 LPMLLGTDLCSLKPYVERYAFSVLWELSPDADIVNVRFTKSVIKSREAFSYEQAQLRVD- 647
Query: 642 KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVF 700
+SS ++ SI++L +SK LK KR GAL L + + V
Sbjct: 648 ----DSSQN--------------DELTTSIRTLLALSKKLKQKRLDAGALSLSSPEVKVQ 689
Query: 701 LFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLR 760
+ E P D D L EEFMLLAN + A I AFP +A+LRRH AP
Sbjct: 690 MESETSDPIDVKTKVLLDTMSLVEEFMLLANVSVARKIHEAFPQTAILRRHGAPPKTNFD 749
Query: 761 EF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCS 818
E +K G+ L SS SL+ + K+ + F+ LI ATR M A YFCS
Sbjct: 750 ELANQLRAKRGMDLSVESSRALADSLDACVDP-KEPF--FNTLIRIMATRCMMAAEYFCS 806
Query: 819 GDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR 870
G + ++ HY LA +YTHFTSP+RRY DL+ HR L AA+ E ++ R
Sbjct: 807 GT-QAYPEFRHYGLASEIYTHFTSPIRRYADLMAHRQLAAAIGYEAIHPTTR 857
>gi|380483240|emb|CCF40746.1| mitotic control protein dis3 [Colletotrichum higginsianum]
Length = 567
Score = 254 bits (649), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 173/467 (37%), Positives = 235/467 (50%), Gaps = 44/467 (9%)
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK+ + + +P+ + KRL LV ID W+ +S +P H + G
Sbjct: 4 RIPKIKLRSRQVPELLGKRL----------LVT--IDAWDRDSRYPVGHFVRSLGELETK 51
Query: 469 EPQINAILYENAICCSGFSPESLSCLP--CVPWEVPQE----ELLSRKDLRNFCIFTIDP 522
+ A+L E+ + F L CLP W VPQ R+DLR I +IDP
Sbjct: 52 AAETEALLLEHDVQYRPFPKTVLDCLPKEGHDWRVPQNLEDPGWRDREDLRKLLICSIDP 111
Query: 523 STATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPML 582
D+DD L L +G VGVHIADVS+FV PG A+D EA +R TSVY++ ++I ML
Sbjct: 112 IGCQDIDDTLHARPLPNGNFEVGVHIADVSHFVKPGNAMDTEASLRGTSVYLVDKRIDML 171
Query: 583 PVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
P+LL ++ SL P V+R AFS+ W++N D+V ++VI+S SYE AQ +D
Sbjct: 172 PMLLGTDLCSLKPYVERYAFSVIWEMNPNADIVGARFTKSVIQSKEAFSYEAAQLRVD-- 229
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFL 701
+ D+ SI++L +SK LK KR GAL L + + V +
Sbjct: 230 -----------------DASQQDDLTNSIRTLMMLSKKLKQKRMDAGALSLSSPEVKVQM 272
Query: 702 FDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLRE 761
E P D D L EEFMLLAN + A I AFP +A+LRRH AP E
Sbjct: 273 ESETSDPIDVKTKQHLDTMSLVEEFMLLANVSVASKIYEAFPQTAILRRHGAPPKTNFDE 332
Query: 762 FE-AFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSG 819
K GL+L SS SL+ + F+ L+ ATR M A YFCSG
Sbjct: 333 LSNQLRVKKGLELRVDSSKALADSLDNCVDPADP---FFNTLVRIMATRCMMSAEYFCSG 389
Query: 820 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
+ ++ HY LA +YTHFTSP+RRY DLV HR L A + E ++
Sbjct: 390 T-QAYPEFRHYGLASEIYTHFTSPIRRYADLVAHRQLAAXIGYEAIH 435
>gi|391337831|ref|XP_003743268.1| PREDICTED: exosome complex exonuclease RRP44-like [Metaseiulus
occidentalis]
Length = 978
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 174/506 (34%), Positives = 244/506 (48%), Gaps = 45/506 (8%)
Query: 433 ATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLS 492
A + + + ID W S +P H + G G+ + + +L E+ I FS L+
Sbjct: 402 AALTGKRIVVAIDSWPRHSRYPLGHYVRTLGDIGDRKVENQVLLLEHDIPHQPFSQAVLN 461
Query: 493 CLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVS 552
CLP +PW + + R+D R+ ++DP TD+DDAL L +G +GVHIADVS
Sbjct: 462 CLPKMPWLITPLDESKRQDFRSVPTCSVDPPGCTDIDDALHARSLPNGNFEIGVHIADVS 521
Query: 553 YFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAG 612
+F+ P TALD EA R T+VY++ ++I M+P LLS + SL VDR AFS +++
Sbjct: 522 HFIRPHTALDREAATRGTTVYLVDQRIDMIPDLLSSNLCSLISDVDRFAFSAVFEMTEDA 581
Query: 613 DVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIK 672
VV +++IRS +Y AQ ID K +V ++
Sbjct: 582 KVVGAKYCKSIIRSKNSFTYAEAQARIDDK-------------------ARKDEVTEGLR 622
Query: 673 SLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLAN 731
L ++K +K KR +GAL L +S+ F D E P D ++N + EEFMLLAN
Sbjct: 623 VLNSLAKKMKLKRMENGALNLASSEVRFQVDSETHDPIDVKTKELLEVNSMVEEFMLLAN 682
Query: 732 KTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREK 791
K+ AE I ALLRRHP P + + G + SL++A
Sbjct: 683 KSVAEFIYNELSHCALLRRHPVPPVGNFDPLVRAAATRGFDIQVDCGKHLADSLDRA--S 740
Query: 792 LKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 851
+ D +L ATR M A YFCSG + D+ HY LA P YTHFTSP+RRY DL+
Sbjct: 741 IDTDPFFNTMLRMVATRCMSQAIYFCSGTIAKE-DFLHYGLALPFYTHFTSPIRRYSDLI 799
Query: 852 VHRTLNAALEAEKLY---------------WKHRRMLPKNNHREGVRGRFLTGIFY-DKD 895
VHR L A+ A+ Y +R + + R V T I++ DK+
Sbjct: 800 VHRLLAVAIGADATYPELLDKVRVQNLCNNLNYRHKMAQYAGRASV--TLYTQIYFRDKN 857
Query: 896 AAES---LEGRE-ALSVAALKYGVPC 917
E L RE AL V KYG+ C
Sbjct: 858 VLEDGYILFVRENALQVLLPKYGMEC 883
>gi|163754550|ref|ZP_02161672.1| putative exoribonuclease [Kordia algicida OT-1]
gi|161325491|gb|EDP96818.1| putative exoribonuclease [Kordia algicida OT-1]
Length = 731
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 156/433 (36%), Positives = 225/433 (51%), Gaps = 28/433 (6%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 499
V I++W + P +V + G+ GE + +I++IL E + F E +
Sbjct: 188 VLVEIEDWPARADSPFGNVTQILGKPGEHDTEIHSILAEYGLPYE-FPAEVEKFANKIDL 246
Query: 500 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 559
+ +E+ R+D+R+ FTIDP A D DDALS + L +G +G+HIADVS++V PGT
Sbjct: 247 SIQADEIKKRRDMRDVLTFTIDPKDAKDFDDALSFQTLENGNYEIGIHIADVSHYVKPGT 306
Query: 560 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 619
LD EA R+TSVY++ R +PMLP +LS SL P ++ FS +++N +V+++W
Sbjct: 307 VLDEEAYNRATSVYLVDRVVPMLPEILSNGACSLRPNEEKYTFSAVFEINKKAEVLNQWF 366
Query: 620 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWP---QLYGQFEWSD--VVRSIKSL 674
GRTV S + +YE AQ II+ K G P L G+ D +V + L
Sbjct: 367 GRTVTYSDKRFAYEEAQVIIETK---------GNEIPADISLTGKAYKVDQAIVEATLKL 417
Query: 675 YEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTA 734
E++KI++ KR GA+ + + F DE P ++D N L EEFMLLAN+
Sbjct: 418 DELAKIMRAKRMQHGAISFDKVEVRFNLDENNNPEGVYFKTQKDANKLIEEFMLLANRKV 477
Query: 735 AEVIARAFPDSALLRR-HPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQ--AREK 791
A I + P + R H P++ KL + S+ G L+ S SL Q A K
Sbjct: 478 AAYIGKQEPKKTFVYRIHDEPDIDKLANLQTIISRFGYSLNLKSRKSTTSSLNQLLADVK 537
Query: 792 LKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 851
K + + D L A R M A Y + GHY LAF Y+HFTSP+RRYPD++
Sbjct: 538 GKGEQNMVDTL---AIRSMSKAKYTTD-------NIGHYGLAFDYYSHFTSPIRRYPDVM 587
Query: 852 VHRTLNAALEAEK 864
VHR L L+ K
Sbjct: 588 VHRLLQHYLDGGK 600
>gi|367013066|ref|XP_003681033.1| hypothetical protein TDEL_0D02380 [Torulaspora delbrueckii]
gi|359748693|emb|CCE91822.1| hypothetical protein TDEL_0D02380 [Torulaspora delbrueckii]
Length = 997
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 188/541 (34%), Positives = 268/541 (49%), Gaps = 73/541 (13%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 407
+PT RVV+I RS R+ VG + N GGS+ + +
Sbjct: 383 QPTARVVAIPRRSWRQ--YVGQIAPNSVDAKTGGSQN----------------VFVILMD 424
Query: 408 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 467
PK+ + + D + KR + +D W +P H + G
Sbjct: 425 KCLPKVRIRTRRANDLLGKR------------IVISLDSWPATHKYPLGHFVRDLGEVES 472
Query: 468 VEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQE----ELLS-------RKDLRN 514
E + A+L E+ + FS + L CLP W+ P + E+++ R+DLR+
Sbjct: 473 AEAETEALLLEHDVEYRPFSKKVLECLPAEGHDWKAPADLNDPEMIAKDSLLQKRRDLRD 532
Query: 515 FCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYM 574
I +IDP D+DDAL +RLS+G VGVHIADV++FV P TALD E R TSVY+
Sbjct: 533 KLICSIDPPGCVDIDDALHAKRLSNGNWEVGVHIADVTHFVKPNTALDAEGASRGTSVYL 592
Query: 575 LQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEH 634
+ ++I MLP+LL ++ SL P V+R AFS+ W+L+ ++V+ ++VI+S SYE
Sbjct: 593 VDKRIDMLPMLLGTDLCSLKPYVERFAFSVIWELDDNANIVNVDFMKSVIKSREAFSYEQ 652
Query: 635 AQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLE 694
AQ ID D + L EG +++L ++S LK KR GAL L
Sbjct: 653 AQLRID---DPNQKDELTEG----------------MRALLQLSIKLKQKRLDAGALNLA 693
Query: 695 NSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPA 753
+ + V + E P + + N L EEFMLLAN + A I AFP +A+LRRH A
Sbjct: 694 SPEVKVHMDSETSDPNEVEIKKLLATNSLVEEFMLLANISVARKIFDAFPQTAMLRRHAA 753
Query: 754 P---NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRP 809
P N L E ++ GL + SS SL++ + +D Y F+ L+ +TR
Sbjct: 754 PPSTNFETLNEM--LQTRKGLSISIESSKALADSLDRCIDP-QDPY--FNTLVRIMSTRC 808
Query: 810 MQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKH 869
M A YF SG + D+ HY LA +YTHFTSP+RRY D+V HR L A+ E L H
Sbjct: 809 MMAAQYFYSGAYS-YADFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYEPLDLMH 867
Query: 870 R 870
R
Sbjct: 868 R 868
>gi|326800487|ref|YP_004318306.1| ribonuclease R [Sphingobacterium sp. 21]
gi|326551251|gb|ADZ79636.1| ribonuclease R [Sphingobacterium sp. 21]
Length = 711
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 179/528 (33%), Positives = 257/528 (48%), Gaps = 98/528 (18%)
Query: 347 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 406
++ G VV IIER R G L++++ F + L DR+ +
Sbjct: 132 RKKEGEVVEIIERF--RSDFTGILSISKRFAF--------------LIADDRKML----- 170
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 466
H Y +P +E+ + + + V I +W + S P V HV G+ G
Sbjct: 171 HDIY---------IP------IEDLNGAKDQDKVVVTITDWPQGSKNPVGRVKHVLGKQG 215
Query: 467 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQ-EELLS------RKDLRNFCIFT 519
E ++NAIL + GF L+ V E + EE++S RKD R+ FT
Sbjct: 216 ENNTEMNAILAD-----FGFP---LAFPTAVEQEADKIEEVISPVEISRRKDFRSVLTFT 267
Query: 520 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 579
IDP+ A D DDA+S ++ DG VGVHIADV+++V P +ALD EA R TSVY++ R I
Sbjct: 268 IDPADAKDFDDAISFRKMPDGNYEVGVHIADVTHYVQPDSALDKEAYERGTSVYLVDRVI 327
Query: 580 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDII 639
PMLP LS + SL P D+L FS + ++ V ++W GRT+I S + +YE AQ+II
Sbjct: 328 PMLPERLSNNLCSLRPNEDKLCFSAVFIIDDQAHVKEQWFGRTIIHSDRRFTYEEAQEII 387
Query: 640 DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPV 699
+ K GQF ++ L +++ IL+D++F GA+ E+++
Sbjct: 388 ENK----------------EGQFSEELLI-----LNKLAYILRDRKFKQGAINFESTEVK 426
Query: 700 FLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALL----RRHPAPN 755
F DE G P R+D + L E+FMLLAN+ AE I + L R H APN
Sbjct: 427 FKLDENGKPLGVYTKERKDAHKLIEDFMLLANRKVAEFIGKQGKGKNKLPFVYRSHDAPN 486
Query: 756 MRKLREFEAFCSKHGLQLDTSSSGQFHQSL-------EQAREKLKDDYVLFDILINYATR 808
L F F ++ G ++ T S + +SL E +E+ ++L A R
Sbjct: 487 EESLASFAQFAARFGYKVSTKSEKEIAKSLNALMHDVEGTKEQ--------NVLTTLAIR 538
Query: 809 PMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTL 856
M A Y HY LAF YTHFTSP+RRYPD++VHR L
Sbjct: 539 SMAKAIYTTK-------KHSHYGLAFDYYTHFTSPIRRYPDVMVHRLL 579
>gi|407926512|gb|EKG19479.1| Ribonuclease II/R [Macrophomina phaseolina MS6]
Length = 1364
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 196/729 (26%), Positives = 329/729 (45%), Gaps = 97/729 (13%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R +F P+ + L G + RVN NR +AY + + D+ I G +NRA
Sbjct: 417 RKTLFTPYLPQATLPALLSDGQLVAGILRVNKKNRSDAYVTTQDLDADIFICGSKDRNRA 476
Query: 216 VEGDFVLIK-VDRLSLWAKMK----------GFSNNSSI-VEDSNLPTEANGMHSDICKG 263
+EGD+V ++ +D +W++ + +SSI V D+ E G I +
Sbjct: 477 LEGDYVAVELLDVDEVWSQKREKEEKKKRKDNTDRSSSIAVNDATTQPETGGADGGIRR- 535
Query: 264 KSKVDVSYEYSNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVS 323
+L +DD E + ++E E N D + +
Sbjct: 536 -----------RGSLRQRPTQKKNDDVEVEGQSLLLMEEEEIN----------DEQKPLY 574
Query: 324 SSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLN-VNQWFNYKGGS 382
+ + IER++ + S G +G L +Q K +
Sbjct: 575 AGHI---VAVIERVAGQMFS---------------------GTLGLLRPSSQATKEKQEA 610
Query: 383 RKDAKKNRSSLSVPDRE-----YIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEM 437
+ A++ S P+R+ + PT + P + + + P +R ++
Sbjct: 611 ERAAREGGSGRQQPERQQDKPKIVWFKPTDKRVPLIAIPTEQAPRDFVERHQD----YAN 666
Query: 438 ELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV 497
+ A I W S P ++ G G+++ + +A+L +N FS L +
Sbjct: 667 RIFVACIKRWPITSLHPFGTLVEQLGEMGDLKVETDALLRDNNFGPDDFSDAVLRNVGFE 726
Query: 498 PWEVPQE---ELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYF 554
W V + L R+D R FTIDP+ + +LDDA+ + L DG +G+H+ADV++F
Sbjct: 727 DWSVANDGEAALEGRRDFREEQTFTIDPNGSKELDDAIHFKSLEDGNLEIGIHVADVAHF 786
Query: 555 VLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLN-SAGD 613
V + +D EA+ R T+VY++ R + MLP LS ++ L+PG +R S+ + ++ S G
Sbjct: 787 VKANSLVDREAKKRGTAVYLMDRAVNMLPAKLSSDILCLSPGEERYTVSVVFKVDPSTGK 846
Query: 614 VV--DRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSI 671
V D +IG+ +I+S KLSYE II+G+ G + + + I
Sbjct: 847 VFDDDTFIGKGIIKSSGKLSYEQVDAIINGR-----------------GASDLAVKEQDI 889
Query: 672 KSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLAN 731
+ L+ +++ L++ RF + + + + + ++ D+ P + + + L EE AN
Sbjct: 890 QKLHSITQKLREARFGNRSTDIPSLRLLYQLDDENVPVEENIFHSSPSHELIEELSHKAN 949
Query: 732 KTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREK 791
A++I + ALLRRH PN R+L+ F S G ++D +SSG SL Q +
Sbjct: 950 AAVAQLIQAKLGEKALLRRHAGPNPRRLQTFVDRMSAIGFEIDPTSSGTLQSSLFQVQ-- 1007
Query: 792 LKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 851
D ++ + + MQ A YF +G +D W HYAL P+YTHFT+P RRY D++
Sbjct: 1008 ---DPIIRQGMETLLVKTMQRAKYFVAGKQAED-QWSHYALNLPLYTHFTNPSRRYADII 1063
Query: 852 VHRTLNAAL 860
VHR L AAL
Sbjct: 1064 VHRQLEAAL 1072
>gi|363581142|ref|ZP_09313952.1| ribonuclease R [Flavobacteriaceae bacterium HQM9]
Length = 739
Score = 253 bits (647), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 157/432 (36%), Positives = 228/432 (52%), Gaps = 22/432 (5%)
Query: 438 ELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV 497
ELV +D+W E++ P + V G GE E +I+AIL + + F + +
Sbjct: 189 ELVLVTMDDWPEKADSPFGTIKEVLGTPGEHETEIHAILLQYGLPYE-FPKKVEDYANQL 247
Query: 498 PWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLP 557
+ +EE+ R+D+R FTIDP A D DDALS + L +G VG+HIADVS++V P
Sbjct: 248 DTSIQKEEIAKRRDMRKTLTFTIDPKDAKDFDDALSFKILENGNYEVGIHIADVSHYVKP 307
Query: 558 GTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR 617
GT LD EA R+TSVY++ R +PMLP +LS SL P ++ FS +++ +V+
Sbjct: 308 GTILDDEAYERATSVYLVDRVVPMLPEVLSNNACSLRPHEEKYTFSAVFEITPNAKIVNE 367
Query: 618 WIGRTVIRSCCKLSYEHAQDIID-GKFDVESSNTL-GEGWPQLYGQFEWSDVVRSIKSLY 675
W GRTVI S + +YE AQ II+ GK + ++ +L GE + S V ++I L
Sbjct: 368 WFGRTVIYSDSRFAYEEAQQIIETGKTTIPANISLTGETYEA------CSYVAQAILKLD 421
Query: 676 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 735
+++KI+++ R GAL + ++ F DE P +D N L EEFMLLANK +
Sbjct: 422 DLAKIMRNARMKSGALSFDKTEVKFKLDENNEPIGVFFKTSKDANKLIEEFMLLANKKVS 481
Query: 736 EVIARAFPDSALLRR-HPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLK- 793
E I + P + R H PN KL + S+ G L+ + SL + +K
Sbjct: 482 EFIGKQTPKKTFVYRIHDEPNEEKLVALQNIVSQFGHSLNLQNKKTVTSSLNKLLLDVKG 541
Query: 794 -DDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 852
+ + D L A R M A Y + GHY L+F Y+HFTSP+RRYPD++
Sbjct: 542 QKEQNMVDTL---AIRTMSKAVYTTQ-------NIGHYGLSFDYYSHFTSPIRRYPDVMA 591
Query: 853 HRTLNAALEAEK 864
HR L L+ K
Sbjct: 592 HRLLQHYLDGGK 603
>gi|150026517|ref|YP_001297343.1| ribonuclease R [Flavobacterium psychrophilum JIP02/86]
gi|149773058|emb|CAL44542.1| Ribonuclease R [Flavobacterium psychrophilum JIP02/86]
Length = 724
Score = 253 bits (647), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 170/522 (32%), Positives = 264/522 (50%), Gaps = 59/522 (11%)
Query: 347 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 406
KRP G V+ ++ER+ + VG +++ + F + ++
Sbjct: 132 KRPEGEVIEVVERA--KTDFVGVIDIQKNFAF------------------------VSTA 165
Query: 407 HPK-YPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
+PK Y + + + + ++ ++GD +V I++W +++ P V V G+
Sbjct: 166 NPKMYTDIFIPLAKIAEA-----QQGD------VVLVHIEDWPKKADSPFGAVTKVLGKP 214
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
GE +I+AIL E + S F E + + + E+ R+D+R FTIDP A
Sbjct: 215 GEHNTEIHAILAEYGLP-SEFPVEVEIFAQKIDTSIQESEIAKRRDMRQTLTFTIDPKDA 273
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
D DDALS ++L +G +G+HIADVS+++ GT LD EA R+TSVY++ R +PMLP +
Sbjct: 274 KDFDDALSFKKLENGNYEIGIHIADVSHYLQEGTILDDEAYQRATSVYLVDRVVPMLPEV 333
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS SL P ++ FS ++++ V+++W GRTVI S + +YE AQ II+ K
Sbjct: 334 LSNFACSLRPNEEKYTFSAIFEIDEKATVINQWFGRTVIDSNQRFAYEEAQYIIETK--- 390
Query: 646 ESSNTLGEGWPQLYGQFEWSD-VVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDE 704
NT+ + SD +V + L E++KI++ KR DGA+ + + F +
Sbjct: 391 --DNTIPVDISITGSSYIVSDEIVAATLKLDELAKIMRRKRMNDGAISFDKVEVKFNLSQ 448
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
G P +D N L EEFMLLAN+ AE I + + + R H PN KL +A
Sbjct: 449 DGEPEGVFFKVSKDANHLIEEFMLLANRKVAEYIGKQ-KKTFIYRIHDEPNEDKLFAMQA 507
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLK--DDYVLFDILINYATRPMQLASYFCSGDFK 822
+K G ++D G+ +SL ++ + L D L A R M A Y
Sbjct: 508 VIAKFGYKIDF-RGGEISKSLNALMAEVNGTKEQNLIDTL---AIRTMSKAKYSTE---- 559
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
+ GHY LAF Y+HFTSP+RRYPD++VHR L L+ K
Sbjct: 560 ---NIGHYGLAFDYYSHFTSPIRRYPDVMVHRLLQFYLDGGK 598
>gi|449268388|gb|EMC79256.1| DIS3-like exonuclease 2 [Columba livia]
Length = 422
Score = 253 bits (647), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 141/374 (37%), Positives = 202/374 (54%), Gaps = 53/374 (14%)
Query: 581 MLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIID 640
MLP LL EE+ SLNP DRL FS+ W + G ++D W GRTVI SC KLSY+HAQ +I+
Sbjct: 1 MLPKLLCEELCSLNPMRDRLTFSVVWKVTPEGKILDEWFGRTVICSCVKLSYDHAQSMIE 60
Query: 641 GKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVF 700
V S L P + Q +++ +++ +L+ +++ L+ +RF DGALRL+ K F
Sbjct: 61 SPGKVFSPEEL----PPVSPQHSVAEIQQAVLNLHRIAQHLRRQRFIDGALRLDQLKLSF 116
Query: 701 LFDE-YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKL 759
D+ G P + D N L EEFMLLAN A I R+FP+ ALLRRHP P + L
Sbjct: 117 TLDQDSGMPQGCYIYQYRDSNKLVEEFMLLANMAVAHQIYRSFPEQALLRRHPPPQTKLL 176
Query: 760 REFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSG 819
++ FC++ GL +D SS+G H+SL + K ++L N +RPMQ+A YFC+G
Sbjct: 177 KDLMEFCNQVGLDIDFSSAGTLHKSLNETFGADKYSEARKEVLTNMFSRPMQMALYFCTG 236
Query: 820 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHR 879
KD+T + HYAL P YTHFTSP+RRY D++VHR L+A+L A P +
Sbjct: 237 VLKDETLFRHYALNVPFYTHFTSPIRRYADIIVHRLLSASLGASS---------PIKMKK 287
Query: 880 EGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVK 939
E ++ + A HCNDRK+A + V+
Sbjct: 288 EAIQKQ---------------------------------------ADHCNDRKMASKRVQ 308
Query: 940 DACVKLYMWILLKK 953
+ L+ + +++
Sbjct: 309 ELSADLFFAVFVRE 322
>gi|448112215|ref|XP_004202038.1| Piso0_001511 [Millerozyma farinosa CBS 7064]
gi|359465027|emb|CCE88732.1| Piso0_001511 [Millerozyma farinosa CBS 7064]
Length = 987
Score = 253 bits (647), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 169/470 (35%), Positives = 244/470 (51%), Gaps = 36/470 (7%)
Query: 413 MVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQI 472
V+L+ L I+ + + + +V +D W S +PQ H + G E +
Sbjct: 415 FVILMDKLLPRIRIKTRKARELLGKRIVVV-VDSWPSNSKYPQGHFVRCLGDVESAEAET 473
Query: 473 NAILYENAICCSGFSPESLSCLP--CVPWEV-----PQE-ELLSRKDLRNFCIFTIDPST 524
A+L E+ + FS LSCLP W V P++ + R DLR+ + +IDP
Sbjct: 474 EALLLEHDVEYRPFSKSVLSCLPEDGDNWTVENHSNPEDPKFAKRVDLRDRLVCSIDPPN 533
Query: 525 ATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPV 584
D+DDAL +L +G VGVHIADV++FV TALD EA R TSVY+++++I MLP+
Sbjct: 534 CVDIDDALHARKLPNGNYEVGVHIADVTHFVRANTALDAEAASRGTSVYLVEKRIDMLPM 593
Query: 585 LLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFD 644
+L + SL P VDR AFS+ W+++ ++V +++I+S +YE AQ ID K
Sbjct: 594 VLGTNLCSLKPYVDRFAFSVIWEVDEDANIVKADFMKSIIKSRKAFAYEEAQIRIDDK-- 651
Query: 645 VESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFLFD 703
S N ++ +S++ L +SK LK KR GAL L + + V + +
Sbjct: 652 --SQN---------------DELTQSMRILLNLSKKLKSKRVKAGALNLASPEVKVHMDN 694
Query: 704 EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFE 763
E P + + + N L EEFML AN + A I A+P +A+LRRH AP E
Sbjct: 695 ETSDPGEVEIKQLLETNSLVEEFMLFANISVARKIFDAYPQTAMLRRHAAPPATNFEELN 754
Query: 764 AF--CSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGD 820
K + L SS SL++ ++ KD Y F+ L+ +TR M A YF SG
Sbjct: 755 NMLRARKKNMALSLESSKALADSLDRCVDE-KDPY--FNTLLRIMSTRCMMAAEYFPSGS 811
Query: 821 FKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR 870
+ W HY LA +YTHFTSP+RRY D+VVHR L A+ E+L HR
Sbjct: 812 YGYPEFW-HYGLAVDIYTHFTSPIRRYCDVVVHRQLAGAIGYEQLDLSHR 860
>gi|346225792|ref|ZP_08846934.1| ribonuclease R [Anaerophaga thermohalophila DSM 12881]
gi|346226965|ref|ZP_08848107.1| ribonuclease R [Anaerophaga thermohalophila DSM 12881]
Length = 720
Score = 253 bits (647), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 178/564 (31%), Positives = 267/564 (47%), Gaps = 83/564 (14%)
Query: 313 PSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNV 372
P D V+ S +N + P K+ G VV IIERS RD VG L V
Sbjct: 100 PDEGDEDIFVAQSNLGHALNGDRVKVLQYARKPRKQAEGEVVEIIERS--RDHFVGTLEV 157
Query: 373 NQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGD 432
++ F + D++ + +P P H K G
Sbjct: 158 SKGFAFLVA---DSRVMHHDIFIP--------PEHLK---------------------GG 185
Query: 433 ATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLS 492
+ +V I EW + P V+ + G GE +++AIL E + + ++
Sbjct: 186 KNGQKAVVC--ITEWPGRAKNPIGKVVDILGNPGENNTEMHAILAEFNLPYK-YPANVVA 242
Query: 493 CLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVS 552
+ ++P E+ R+D R FTIDP+ A D DDALS+ +L +G VG+HIADV+
Sbjct: 243 AAEKIKDKIPAAEIKKRRDFRKVTTFTIDPADAKDFDDALSLRKLKNGNWEVGIHIADVT 302
Query: 553 YFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAG 612
++V P T +D EA R+TSVY++ R +PMLP LS E+ SL P D+L FS ++L++
Sbjct: 303 HYVHPNTVIDKEAADRATSVYLVDRVVPMLPERLSNELCSLRPDEDKLCFSAVFELDNDA 362
Query: 613 DVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIK 672
V+D W+GRT+IRS + +YE AQ +I+ GEG D+ +K
Sbjct: 363 RVLDSWVGRTIIRSDRRFTYEEAQTVIE----------TGEG-----------DLNSELK 401
Query: 673 SLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANK 732
L ++++ L+ +RF+ G++ E + F DE G P ++ N L EEFMLLAN+
Sbjct: 402 VLNDLAQKLRKERFSKGSIDFERVEVKFELDENGNPLSVFFKEAKEANKLIEEFMLLANR 461
Query: 733 TAAEVIARAFPD-----------SALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQF 781
AE+I + D + + R H PN K F F K G + + +
Sbjct: 462 RVAEIIGQNELDGKNSAPGKNAKTFVYRIHDEPNPEKYETFSKFVRKLGFE----AMPKG 517
Query: 782 HQSLEQAREKLKDDYV---LFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYT 838
H+++ + +L D+ +I+ A R M A Y + GHY L F YT
Sbjct: 518 HETIGHSLNRLLDEVQGKKHQNIVETLAIRTMSKAVYSTH-------NIGHYGLGFKYYT 570
Query: 839 HFTSPLRRYPDLVVHRTLNAALEA 862
HFTSP+RRYPD++VHR L L+
Sbjct: 571 HFTSPIRRYPDMMVHRLLQRYLDG 594
>gi|156048798|ref|XP_001590366.1| hypothetical protein SS1G_09131 [Sclerotinia sclerotiorum 1980]
gi|154693527|gb|EDN93265.1| hypothetical protein SS1G_09131 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 1353
Score = 253 bits (647), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 198/737 (26%), Positives = 339/737 (45%), Gaps = 87/737 (11%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEG--VQTDVLITGIAAQN 213
R +F P+ + L G + RVN NR +AY + D+ I G +N
Sbjct: 406 RKTLFTPYLPQATLPALLGDGQLVSGILRVNKKNRSDAYVTTHDGLLDADIFICGSKDRN 465
Query: 214 RAVEGDFVLIKV-DRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYE 272
RA+EGD V +++ D +W + + DI ++ S
Sbjct: 466 RALEGDLVAVELLDVDEVWGQKREKEEKKKR--------------KDITDTRTGGSTSGN 511
Query: 273 YSNCTLLSEKGIHHDDDSSSEAYNQEM-IEREGYNYINGHHPSTSDSTEKVSSSQQNDGM 331
+++ H D+ ++ + NQE + R G S + + ++ND +
Sbjct: 512 -------NDRNHHRDNPTNGDEQNQEGGLRRRG-------------SLRQRPTQKKNDDV 551
Query: 332 NAIERLSAMISSYPT----KRP--TGRVVSIIERSPRR--DGIVGFLN-VNQWFNYKGGS 382
+E S ++ ++P G +V++IER + G +G L +Q K +
Sbjct: 552 E-VEGQSLLLVEEEEVNDEQKPLYAGHIVAVIERVAGQMFSGTLGLLRPSSQATKEKQEA 610
Query: 383 RKDAKKNRSSLSVPDREY-----IQLTPTHPKYPKMVVLVKDLP-DSIKKRLEEGDATIE 436
+ A+ S R+ + PT + P + + + P D ++K + D
Sbjct: 611 ERQARDGNSGRHQEQRQQDKPKIVWFKPTDKRVPLIAIPTEQAPRDFVEKHQDYAD---- 666
Query: 437 MELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC 496
+ A I W S P ++ G+ GE++ + +A+L +N FS +
Sbjct: 667 -RIFVACIKRWPITSLHPFGTLVEQLGKMGELKVETDALLRDNNFASDEFSDAVTRSVGL 725
Query: 497 VPWEVPQEE---LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSY 553
W + +E+ + +R+D R FTIDP+ A +LDDA+ ++ +DG +G+HIADV++
Sbjct: 726 DDWSLEKEDETSISTRRDFREEKTFTIDPNGADELDDAIHVKTEADGKIEIGIHIADVAH 785
Query: 554 FVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGD 613
F+ + +D EA+ R T+VY++ R MLP ++ ++ SL PG DRL S+ + +N+
Sbjct: 786 FIKANSLVDREARKRGTAVYLMNRSCAMLPPKIASDICSLTPGQDRLTVSVVFKVNAQTG 845
Query: 614 VV---DRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRS 670
V + WIG+++I+S KL+Y+ ++ G+ DV + E ++ V+
Sbjct: 846 TVFEEETWIGKSIIKSGGKLTYKDVDAVLSGQTDV---------------KLEGAE-VKD 889
Query: 671 IKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLA 730
I+ L V++ ++ R + + V+ D+ P + + + L EE M A
Sbjct: 890 IQILNAVTQKFRESRLGSDGETIAPLRLVYQLDDENVPVEQNIFDSTPSHELIEELMNKA 949
Query: 731 NKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQARE 790
N A+ I + P+ ALLRR PN R+L+ F +K G ++DTSSSG+ SL +
Sbjct: 950 NSYVAQKIYQGLPEKALLRRQGPPNSRRLQTFADRMNKIGYEIDTSSSGRLQNSLFKV-- 1007
Query: 791 KLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDL 850
DD + + + M A YF +G + + HYAL P+YTHFT+P RRY DL
Sbjct: 1008 ---DDTNIRKGMETLLVKSMHRAKYFVAGKTQPHL-YPHYALNLPLYTHFTNPSRRYADL 1063
Query: 851 VVHRTLNAALEAEKLYW 867
VVHR L A L K+ +
Sbjct: 1064 VVHRQLEAVLSDGKIEY 1080
>gi|374599198|ref|ZP_09672200.1| RNAse R [Myroides odoratus DSM 2801]
gi|423324342|ref|ZP_17302183.1| ribonuclease R [Myroides odoratimimus CIP 103059]
gi|373910668|gb|EHQ42517.1| RNAse R [Myroides odoratus DSM 2801]
gi|404608434|gb|EKB07898.1| ribonuclease R [Myroides odoratimimus CIP 103059]
Length = 725
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 182/570 (31%), Positives = 279/570 (48%), Gaps = 69/570 (12%)
Query: 306 NYINGHHPSTSDSTEK-VSSSQQNDGMNAIERLSA-----MISSY-----PTKRPTGRVV 354
NY+ GH TS T VS + D L+ ++ +Y ++P G VV
Sbjct: 79 NYVEGHIDMTSKKTAYLVSEELEEDVFIPTNNLNKALDGDLVKAYIYNKRKGRKPEGEVV 138
Query: 355 SIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMV 414
++ER R VG +++ + N+ + DAK + + +P +++ P
Sbjct: 139 EVLER--HRTQFVGVIDIQK--NFAFVTTADAKM-YTDIFIPKDKFLGAQP--------- 184
Query: 415 VLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINA 474
GD +V +++W E++ P V+ V G+ GE +I+A
Sbjct: 185 ----------------GD------VVLVDLEDWPEKADSPFGKVVKVLGKQGEHNTEIHA 222
Query: 475 ILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSI 534
IL E + + F E + + +EE+ R+D+R FTIDP A D DDALS
Sbjct: 223 ILAEYGLP-NEFPKEVEEFANKLDTSIQEEEVAKRRDMREVLTFTIDPKDAKDFDDALSF 281
Query: 535 ERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLN 594
+ L +G +G+HIADVS++V GT LD EA R+TSVY++ R +PMLP +LS SL
Sbjct: 282 QTLENGNYEIGIHIADVSHYVREGTILDDEAFHRATSVYLVDRTVPMLPEVLSNFACSLR 341
Query: 595 PGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV--ESSNTLG 652
P D+ FS +++N+ G++V+ W GRTV S +++YE AQ II+ + ES + G
Sbjct: 342 PHEDKYTFSAVFEMNAKGELVNSWFGRTVTHSDQRMAYEEAQYIIETQDRTVPESISITG 401
Query: 653 EGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSV 712
E Q +V ++ +L +++ IL+ KR GA+ + + F + P
Sbjct: 402 E------VQEISEEVAHAVLTLNKLAHILRQKRMKAGAISFDKVEVKFNLNSESEPVGVF 455
Query: 713 LSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQ 772
+D N L EEFMLLAN+ +E I + + + R H P+ KL +A S+ G
Sbjct: 456 FKEAKDANHLIEEFMLLANRKVSEFIGKQ-KKTFVYRIHDEPDQDKLFGLQAIISRFGHS 514
Query: 773 LDTSSSGQFHQSLEQAREKL--KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHY 830
L+ S +SL + + + K + L D L A R M ASY + GHY
Sbjct: 515 LNFKSRDTISKSLNELLKNVQGKKEQNLVDTL---AIRSMSKASYSTQ-------NIGHY 564
Query: 831 ALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
LAF Y+HFTSP+RRYPD++ HR L L
Sbjct: 565 GLAFDYYSHFTSPIRRYPDVMAHRLLEFYL 594
>gi|284040706|ref|YP_003390636.1| ribonuclease R [Spirosoma linguale DSM 74]
gi|283819999|gb|ADB41837.1| ribonuclease R [Spirosoma linguale DSM 74]
Length = 825
Score = 253 bits (646), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 180/553 (32%), Positives = 266/553 (48%), Gaps = 98/553 (17%)
Query: 327 QNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDA 386
+N G NA R R G+V S++ER R +VG + V W Y G D+
Sbjct: 176 RNGGRNAARR-----------RIEGKVASVVERG--RTELVGRIEV--WPTY-GFVVPDS 219
Query: 387 KKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPD--SIKKRLEEGDATIEMELVAARI 444
KK + +P + K++V + PD S K+R E
Sbjct: 220 KKIYDDIFIPKEKLGGANDGE----KVIVRLTKFPDPNSSKQRFE--------------- 260
Query: 445 DEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQE 504
V+ V G G+ +++AIL E + F + +P ++ ++
Sbjct: 261 -----------GEVITVLGVAGQNNTEMHAILAEFGLPIH-FPADVEKEAEAIPTKILKK 308
Query: 505 ELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIE 564
+L R+D+R+ FTIDP A D DDALS++ L +G +G+HIADV+++VLPG+ L+ E
Sbjct: 309 DLAKRRDMRDVTTFTIDPIDAKDFDDALSVQILDNGNFEIGIHIADVTHYVLPGSKLEEE 368
Query: 565 AQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVI 624
A R+TSVY++ R +PMLP LS + SL P D+L FS +++ S +V+ W GRT I
Sbjct: 369 AFKRATSVYLVDRVVPMLPEKLSNGLCSLRPNEDKLTFSAVFEMTSDAKIVNEWFGRTAI 428
Query: 625 RSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDK 684
S + +YE AQDI++ SN+ D + ++ L E++ L+D+
Sbjct: 429 HSNRRFAYEEAQDILN-------SNS--------------GDYIEELRLLNELAYKLRDE 467
Query: 685 RFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVI------ 738
RF +GA+ E + F DE G P R+D N L EEFMLLANK AE +
Sbjct: 468 RFKNGAINFETVEVRFRLDENGVPLAVYPKIRQDTNKLIEEFMLLANKRVAEFVHSLSKR 527
Query: 739 -ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLD------TSSSGQFHQSLEQAREK 791
++ + R H +P KLR F F K G +L+ ++S +F S+E E
Sbjct: 528 NKGGEENTMVYRVHESPAEDKLRSFSDFARKLGYKLNVDDEHLSNSMNRFMASIEGKPEA 587
Query: 792 LKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 851
++L A R M A Y D GH+ LAF Y+HFTSP+RRYPD++
Sbjct: 588 --------NMLQQLAVRTMSKARYSTE-------DLGHFGLAFKRYSHFTSPIRRYPDMM 632
Query: 852 VHRTLNAALEAEK 864
HR L L+ K
Sbjct: 633 AHRLLQHYLDKGK 645
>gi|281203121|gb|EFA77322.1| Putative mitotic control protein [Polysphondylium pallidum PN500]
Length = 1275
Score = 253 bits (646), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 172/550 (31%), Positives = 268/550 (48%), Gaps = 55/550 (10%)
Query: 326 QQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKD 385
QQ G A + K TG+VV I +R+ W +Y K
Sbjct: 399 QQTAGQTAGQTTGKTTGDNGNKLITGKVVGIFQRN--------------WRDYVATIEKG 444
Query: 386 AKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARID 445
A SV Y+ + P + P + V ++ + + KRL R+D
Sbjct: 445 A-------SVAS-NYVMVVPLDKRIPLIHVPTRNAVNYVGKRL------------VVRLD 484
Query: 446 EWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEE 505
W S P H++ G G++E ++ +++ E+ + ++P+ L LP W+VP E
Sbjct: 485 RWELGSSHPSGHIVKALGTTGDLETELLSLINEHEVALPKWTPQLLEGLPSPGWKVPDAE 544
Query: 506 LLSRKDL-RNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIE 564
R+ + + +IDP + D+DDA+S+ L++ +GVHIADVS+FVL GT LD E
Sbjct: 545 RKYRRSIVTSHRTMSIDPLGSKDIDDAISLGYLANNRIEIGVHIADVSFFVLDGTKLDEE 604
Query: 565 AQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD-RWIGRTV 623
A R T++Y+ R+ MLP +LSE+V SL G +R A S+ W +N ++ W GRT+
Sbjct: 605 AARRGTTLYLPDRRFDMLPAILSEDVCSLVGGQERCAMSVIWTVNLNNMTIESTWFGRTI 664
Query: 624 IRSCCKLSYEHAQDIIDGKF-------DVESSNTLGEGWP-QLYGQFEWSDVVRSIKSLY 675
I S +L Y+ AQDIIDG+ D + L G+ ++Y + ++ + L
Sbjct: 665 IFSSAELHYQLAQDIIDGRVKQGMDKDDDVTGGGLNAGYKRRVYNDTKIEELRNDLLVLR 724
Query: 676 EVSKILKDKRFTDGALRLENSKPVFLFDE--YGTPYDSVLSGREDLNFLFEEFMLLANKT 733
++++ +R G L LE+ + F F++ P VL +++ L E+M+LAN +
Sbjct: 725 NFYRVMRKQREMSGGLDLESIEVRFKFNQNDKTQPDKIVLKNDLEVHSLVAEYMILANAS 784
Query: 734 AAEVIARAFPDSALLRRHPAPN---MRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQARE 790
I +P ALLRRHP PN + LRE C G +L+T ++ SL A +
Sbjct: 785 VGTKIHSHYPGGALLRRHPKPNQLGFQSLRELFDLC---GFKLETDTNKDLASSLNNAVD 841
Query: 791 KLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDL 850
DD I+ + A YF +G + ++ HY LA YTHFTSP+RRY D+
Sbjct: 842 --GDDPFTNTIIRLKTVNILSEAIYFSTGSL-NVIEYYHYGLALEKYTHFTSPIRRYADI 898
Query: 851 VVHRTLNAAL 860
+VHR L A+
Sbjct: 899 IVHRQLWDAI 908
>gi|390953990|ref|YP_006417748.1| RNAse R [Aequorivita sublithincola DSM 14238]
gi|390419976|gb|AFL80733.1| RNAse R [Aequorivita sublithincola DSM 14238]
Length = 735
Score = 253 bits (646), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 151/434 (34%), Positives = 224/434 (51%), Gaps = 23/434 (5%)
Query: 438 ELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV 497
E+V +++W E++ P V+ V G GE +I+AIL + + F PE + +
Sbjct: 187 EIVLVAMEDWPEKADSPFGSVIKVLGMPGEHNTEIHAILAQYGLPYE-FPPEVEAYANKI 245
Query: 498 PWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLP 557
+ E+ R+D+R FTIDP A D DDALS E+L +G +G+HIADVS++V P
Sbjct: 246 DTSIKASEIKKRRDMRKSLTFTIDPKDAKDFDDALSFEKLDNGNYEIGIHIADVSHYVTP 305
Query: 558 GTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR 617
G LD EA R+TSVY++ R +PMLP +LS SL P ++ FS +++N +VV +
Sbjct: 306 GNELDDEAYERATSVYLVDRVVPMLPEILSNNACSLRPNEEKYTFSAVFEMNQKAEVVKQ 365
Query: 618 WIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWS-DVVRSIKSLYE 676
W G+TV S + +YE AQ +I+ E ++ + Q+ ++ +I +
Sbjct: 366 WFGKTVTYSDARFAYEEAQHVIENP--KEETHIIPSNISITDKQYTVKPEIAEAILEMDR 423
Query: 677 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 736
++K L+ KR GA+ + + F+ DE P +D N + EEFMLLAN++ AE
Sbjct: 424 LAKTLRTKRMRAGAISFDKVEVKFILDEQSNPEGVYFKESKDANKMIEEFMLLANRSVAE 483
Query: 737 VIARAFPDSALLRR-HPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD- 794
I + P + R H P+ K+ E + G +L+T H + + LKD
Sbjct: 484 FIGKQQPKKTFVYRVHDEPDDEKIAALENIIKRFGYKLNTKDR---HTTATSMNKLLKDV 540
Query: 795 ----DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDL 850
+ L D L R M A Y + GHY LAF YTHFTSP+RRYPD+
Sbjct: 541 QGKKEQNLIDTL---TIRSMSKAMYTTH-------NIGHYGLAFDYYTHFTSPIRRYPDV 590
Query: 851 VVHRTLNAALEAEK 864
+VHR L LE K
Sbjct: 591 MVHRLLQHYLENGK 604
>gi|448114783|ref|XP_004202663.1| Piso0_001511 [Millerozyma farinosa CBS 7064]
gi|359383531|emb|CCE79447.1| Piso0_001511 [Millerozyma farinosa CBS 7064]
Length = 988
Score = 253 bits (646), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 167/470 (35%), Positives = 244/470 (51%), Gaps = 36/470 (7%)
Query: 413 MVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQI 472
V+L+ L I+ + + + +V +D W+ S +PQ H + G E +
Sbjct: 416 FVILMDKLLPRIRIKTRKARELLGKRIVVV-VDSWSSNSKYPQGHFVRCLGDVESAEAET 474
Query: 473 NAILYENAICCSGFSPESLSCLP--CVPWEV-----PQE-ELLSRKDLRNFCIFTIDPST 524
A+L E+ + FS LSCLP W V P++ + R DLR+ + +IDP
Sbjct: 475 EALLLEHDVEYRPFSKSVLSCLPEDGDNWTVENNSNPEDPKFAKRVDLRDRLVCSIDPPN 534
Query: 525 ATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPV 584
D+DDAL +L +G VGVHIADV++FV TALD EA R TSVY+++++I MLP+
Sbjct: 535 CVDIDDALHARKLPNGNYEVGVHIADVTHFVRANTALDAEAASRGTSVYLVEKRIDMLPM 594
Query: 585 LLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFD 644
+L + SL P VDR AFS+ W+++ ++V +++I+S +YE AQ ID K
Sbjct: 595 VLGTNLCSLKPYVDRFAFSVIWEVDEDANIVKVDFMKSIIKSRKAFAYEEAQIRIDDK-- 652
Query: 645 VESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFLFD 703
+ ++ +S++ L +SK LK KR GAL L + + V + +
Sbjct: 653 -----------------TQNDELTQSMRILLNLSKKLKSKRVKAGALNLASPEVKVHMDN 695
Query: 704 EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFE 763
E P + + + N L EEFML AN + A I A+ +A+LRRH AP E
Sbjct: 696 ETSDPGEVEIKQLLETNSLVEEFMLFANISVARKIFDAYSQTAMLRRHAAPPATNFEELN 755
Query: 764 AF--CSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGD 820
K G+ L SS SL++ ++ KD Y F+ L+ +TR M A YF SG
Sbjct: 756 NMLRARKKGMALSLESSKALADSLDRCMDE-KDPY--FNTLLRIMSTRCMMAAEYFPSGS 812
Query: 821 FKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR 870
+ W HY LA +YTHFTSP+RRY D+VVHR L A+ E+L HR
Sbjct: 813 YGYPEFW-HYGLAVDIYTHFTSPIRRYCDVVVHRQLAGAIGYEQLDLSHR 861
>gi|402831931|ref|ZP_10880601.1| ribonuclease R [Capnocytophaga sp. CM59]
gi|402280364|gb|EJU29075.1| ribonuclease R [Capnocytophaga sp. CM59]
Length = 732
Score = 253 bits (645), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 163/443 (36%), Positives = 233/443 (52%), Gaps = 28/443 (6%)
Query: 429 EEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSP 488
E+GD V RI +W + P V + G+ GE +I+AIL E + S F
Sbjct: 183 EDGDK------VLVRITQWTSRANSPYGVVEKILGKPGEHNTEIHAILAEYGL-PSEFPQ 235
Query: 489 ESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHI 548
E + + + +EE+ R+D+R FTIDP A D DDALS L +G VGVHI
Sbjct: 236 EVEAYAQQLDTTIKEEEIARRRDMRGVLTFTIDPRDAKDFDDALSFRVLENGNFEVGVHI 295
Query: 549 ADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDL 608
ADVS++V PGT LD EA R+TSVY++ R +PMLP +LS SL P ++ FS ++L
Sbjct: 296 ADVSHYVQPGTILDDEAYQRATSVYLVDRVVPMLPEVLSNFACSLRPEEEKYTFSAIFEL 355
Query: 609 NSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEG-WPQLY-----GQF 662
+ +V + W+GRTVIRS + +YE AQ +I+ FD L + P+ G +
Sbjct: 356 SPQAEVRNVWLGRTVIRSDARFAYEEAQAVIEA-FDTPYMEVLSDFVMPEEISIRPEGSY 414
Query: 663 EWS-DVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNF 721
S +V +I SL +++IL++KR GA+ + + F DE P ++ N
Sbjct: 415 TVSKKIVEAILSLNAMAEILREKRMRAGAISFDKLEVKFFLDENNNPLGVYTKESKEANK 474
Query: 722 LFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQF 781
L EEFMLLAN+ AE A + + R H P+ KL + + S+ G +L+
Sbjct: 475 LIEEFMLLANRKVAEY-ASKLQKTFVYRIHDVPDEEKLLQMQGVISRFGYKLNLKDKKNI 533
Query: 782 HQSLEQAREKL--KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTH 839
S+ +++ K + L D L A R M A+Y + GHY LAF YTH
Sbjct: 534 SHSINHLLQEVHGKKEQNLVDTL---AIRSMSKAAYSTH-------NIGHYGLAFADYTH 583
Query: 840 FTSPLRRYPDLVVHRTLNAALEA 862
FTSP+RRYPD++VHR L L+A
Sbjct: 584 FTSPIRRYPDVMVHRLLQLYLDA 606
>gi|408491086|ref|YP_006867455.1| 3'-to-5' exoribonuclease R VacB [Psychroflexus torquis ATCC 700755]
gi|408468361|gb|AFU68705.1| 3'-to-5' exoribonuclease R VacB [Psychroflexus torquis ATCC 700755]
Length = 741
Score = 253 bits (645), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 153/434 (35%), Positives = 223/434 (51%), Gaps = 28/434 (6%)
Query: 439 LVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVP 498
LV RI +W ++ P+ + V G GE +++AIL + F PE +
Sbjct: 193 LVKVRIVQWKDKDDSPKGEITEVLGVPGEHNTEMHAILAGYGLP-EQFPPEVEEFANGID 251
Query: 499 WEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPG 558
++ E+ R+DLR+ FTIDP+ A D DDALS +++ +G +G+HIADV+++V PG
Sbjct: 252 TKIHSSEIKKRRDLRDTLTFTIDPADAKDFDDALSFKKMDNGNYEIGIHIADVAHYVQPG 311
Query: 559 TALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW 618
T LD EA R+TS+Y++ R +PMLP +LS SL P ++ FS ++L GDV W
Sbjct: 312 TILDDEAYNRATSIYLVDRVVPMLPEILSNGACSLRPNEEKYTFSALFELTPRGDVKSEW 371
Query: 619 IGRTVIRSCCKLSYEHAQDIIDGK-----FDVESSNTLGEGWPQLYGQFEWSDVVRSIKS 673
GRTV S + +YE AQ +ID K D+ S + P+L V +I +
Sbjct: 372 FGRTVTYSDARFAYEEAQFVIDSKDKHIPSDISLSKKAYDIQPEL---------VDAITT 422
Query: 674 LYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKT 733
+ ++SKI++ +R GA+ + + F DE P + +D N L EEFMLLAN+
Sbjct: 423 MNDLSKIMRKERMNQGAISFDKVEVKFHLDEDNNPKGVYVKTSQDANKLIEEFMLLANRK 482
Query: 734 AAEVIA-RAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQARE-- 790
+E I R P + + R H P +L SK G LD + +L E
Sbjct: 483 VSEFIGKRKPPKTFVFRCHDEPQPDRLEALNTVVSKFGYSLDFKNKKNIANTLNGLLEDV 542
Query: 791 KLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDL 850
K K + L D L R M A Y + GHY LAF Y+HFTSP+RRYPD+
Sbjct: 543 KGKKEQNLVDTL---TIRTMSKAYYSTQ-------NIGHYGLAFDYYSHFTSPIRRYPDV 592
Query: 851 VVHRTLNAALEAEK 864
+ HR L ++ E+
Sbjct: 593 MAHRLLQRYIDKEQ 606
>gi|88801781|ref|ZP_01117309.1| ribonuclease R [Polaribacter irgensii 23-P]
gi|88782439|gb|EAR13616.1| ribonuclease R [Polaribacter irgensii 23-P]
Length = 740
Score = 253 bits (645), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 153/432 (35%), Positives = 231/432 (53%), Gaps = 20/432 (4%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 499
V A+I +W + S P ++ V G+ GE ++++IL E + F E +
Sbjct: 192 VQAKIIDWPQNSKNPFGKIITVLGKPGEHNTEMHSILLEYDLPYE-FESEVEKEAENLSI 250
Query: 500 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 559
E+ +EE+ R+D+R FTIDP A D DDALS ++L +G +G+HIADVS+++ P T
Sbjct: 251 EITKEEISKRRDMRKDLTFTIDPKDAKDFDDALSFKKLENGNFEIGIHIADVSHYLEPKT 310
Query: 560 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 619
LD EA R+TSVY++ R +PMLP +LS V SL P ++L FS +++N ++ +W
Sbjct: 311 ILDDEAYKRATSVYLVDRVVPMLPEMLSNGVCSLRPNEEKLTFSAVFEINQKAQIISQWF 370
Query: 620 GRTVIRSCCKLSYEHAQDIIDG-KF-DVESSNTLGEGWPQLYGQFEWS-DVVRSIKSLYE 676
GRTV S + +YE AQ II+ K D S T+ + +++ + ++V + L E
Sbjct: 371 GRTVTYSDQRFAYEEAQSIIENCKLSDSISPYTMPADTSIIDKEYQVTPEIVAATLKLNE 430
Query: 677 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 736
+SKIL+ KR DGA+ + + F D+ P +D N L EEFMLLAN+ AE
Sbjct: 431 LSKILRKKRMKDGAISFDRVEVKFDLDKEANPVGVFFKESKDANKLIEEFMLLANRKVAE 490
Query: 737 VI----ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKL 792
I +A + + R H P++ KL + SK G +++T + SL Q +
Sbjct: 491 FIGFSKGKATNKTFIYRVHDEPDVEKLASLQNMVSKFGYKINTDTKEATSDSLNQLLSDV 550
Query: 793 --KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDL 850
K + + + L R M A Y + GHY L+F Y+HFTSP+RRYPD+
Sbjct: 551 HGKPESNMIETL---TIRTMSKAVYTTQ-------NIGHYGLSFDYYSHFTSPIRRYPDI 600
Query: 851 VVHRTLNAALEA 862
+ HR L LE
Sbjct: 601 MTHRLLQHYLEG 612
>gi|449305216|gb|EMD01223.1| hypothetical protein BAUCODRAFT_144773 [Baudoinia compniacensis UAMH
10762]
Length = 1413
Score = 253 bits (645), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 212/765 (27%), Positives = 331/765 (43%), Gaps = 117/765 (15%)
Query: 132 PIANDSSCWAYTNKDDNPSHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRL 191
P+AN + N + Q + R +F P+ + L G + RVN NR
Sbjct: 431 PVANVAQLTGQHNGPTFSNQQQQQRKTLFTPYLPQATLPALLADGQLVAGILRVNKKNRS 490
Query: 192 EAYCKIEGVQTDVLITGIAAQNRAVEGDFVLIK-VDRLSLWAKMKGF------------- 237
+AY + D+ I G +NRA+EGD V ++ +D +W + +
Sbjct: 491 DAYVTTTDLDADIFICGSKDRNRALEGDLVAVELLDVDEVWGQKREKEEKKKRKDVTDQR 550
Query: 238 SNNSSIVEDSNLPTEANGMHSDICK---------GKSKVDVSYEYSNCTLLSEKGIHHDD 288
S + + V D+ E++ S + + K DV E + L+ E I+ +
Sbjct: 551 SGSITAVNDATTAPESSAQDSGLRRRGSLKQRPTQKKNDDVEVEGQSLLLMEEDEINDEQ 610
Query: 289 DSSSEAYNQEMIEREGYNYINGH----HPSTSDSTEKVSSSQQNDGMNAIERLSAMISSY 344
+ +IER +G PS+ + EK + ++ ER S
Sbjct: 611 KPLYAGHVVAVIERVPGQMFSGTLGLLRPSSQATKEKQEAERR-------EREGGNFS-- 661
Query: 345 PTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLT 404
RP ER R IV WF
Sbjct: 662 ---RP--------ERQNERPKIV-------WFK--------------------------- 676
Query: 405 PTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGR 464
PT + P + + + P +R ++ ++ A I W S P ++ G
Sbjct: 677 PTDKRVPLIAIPTEQAPKDFVERHQD----YANKIFVACIKRWPITSLHPFGTLVEQLGD 732
Query: 465 GGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVP---QEELLSRKDLRNFCIFTID 521
G++ + +A+L +N FS + W V + L R+D R+ FTID
Sbjct: 733 AGDLRVETDALLRDNNFGPDDFSEAVAKSVGYEEWSVAADGEAALAGRRDFRDDKTFTID 792
Query: 522 PSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPM 581
P+ + +LDDAL ++ L DG+ +G+H+AD+++FV + +D EA+ R T VY++ R + M
Sbjct: 793 PNGSKELDDALHLKDLGDGMVEIGIHVADMAHFVKANSLVDREAKKRGTGVYLMNRSVNM 852
Query: 582 LPVLLSEEVGSLNPGVDRLAFSIFWDLNSA-GDVVDR--WIGRTVIRSCCKLSYEHAQDI 638
LP LS+E+ L+PG +R S+ + +N+A G VVD WIG+ VIRS KL+YE +
Sbjct: 853 LPPKLSQEICCLSPGEERYTVSVVFKVNAATGRVVDEQTWIGKGVIRSDGKLAYEEVDAV 912
Query: 639 IDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKP 698
I+GK SS+++ E Q I LY +++ + RF G + + +P
Sbjct: 913 INGK---PSSSSIDEARKQ------------QILMLYGITQKFRQARF--GGADVVDVQP 955
Query: 699 VFLF---DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPN 755
+ LF D+ P + + + + EE N AE I A PD ALLRR PN
Sbjct: 956 LRLFYQLDDENVPVEQNIFDSSPSHEMIEELSHKTNAMVAERIFAAMPDRALLRRQANPN 1015
Query: 756 MRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASY 815
R+L+ F S G+++D SSS SL + +D + + + M A Y
Sbjct: 1016 PRRLQTFAERMSNIGIEIDISSSAALQNSLFRI-----EDADIRKGMETLVIKSMLRAKY 1070
Query: 816 FCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
F D+ HYAL P+YTHFT+P RRY D+VVHR L A L
Sbjct: 1071 FVPAKIPDEF-LSHYALNLPLYTHFTNPSRRYADIVVHRQLEAVL 1114
>gi|164662369|ref|XP_001732306.1| hypothetical protein MGL_0081 [Malassezia globosa CBS 7966]
gi|159106209|gb|EDP45092.1| hypothetical protein MGL_0081 [Malassezia globosa CBS 7966]
Length = 940
Score = 253 bits (645), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 187/548 (34%), Positives = 269/548 (49%), Gaps = 78/548 (14%)
Query: 347 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKK-NRSSLSVPDREYIQLTP 405
++P GRVV I R+ W +Y + DA N +L+ + + +P
Sbjct: 306 RQPMGRVVGIARRN--------------WRSYV--AHIDASTVNEGALATLGPQTLFASP 349
Query: 406 THPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
K P+ IK R + A I +++ A +DEW S +P+ H + G
Sbjct: 350 VDRKIPR-----------IKIRTRQAGALIGCKILVA-MDEWKSTSRYPEGHFIRSLGAI 397
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEELL------------SRKD 511
E + ++L E + FS L+CLP W VP ++ +R D
Sbjct: 398 ESKEAEQESLLLEFDVPYRPFSKAILACLPAEGDAWTVPPKDAALEGETRAAKIWQNRVD 457
Query: 512 LRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTS 571
LR I +IDP D+DDAL +RL +G GVHIADVS+FV P T +D EA R T+
Sbjct: 458 LRAETICSIDPPGCQDIDDALHAKRLPNGNIEAGVHIADVSFFVRPDTPMDAEAASRGTT 517
Query: 572 VYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLS 631
VY++ R+I MLP LL + SL P V+RLAFS+ W++ VV ++VI S +
Sbjct: 518 VYLVDRRIDMLPHLLGTNLCSLRPYVERLAFSVVWEMTPDAQVVQARFFKSVIASKAAFT 577
Query: 632 YEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGAL 691
Y+ AQ D D++ ++T+ E SI+ L ++ L++ R + GAL
Sbjct: 578 YKEAQTRKD---DMKQTDTITE----------------SIRLLNHLAIKLREARMSAGAL 618
Query: 692 RLENSKPVFLFD--EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLR 749
L + + + E P D + N L EEFMLLAN + A I A+P +A+LR
Sbjct: 619 NLASPEVRIHLESAESSAPIDVEQKEVLETNSLVEEFMLLANTSVARRIYEAYPTTAVLR 678
Query: 750 RH---PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDY-VLFDILINY 805
RH PA N L++ + + LD SSSG SL++ +K + L IL
Sbjct: 679 RHVPPPADNFETLQDI--LKKRRNMDLDVSSSGALAASLDKCIDKRDPAFNTLVRIL--- 733
Query: 806 ATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE-- 863
ATR M A YFC+G + +GHY LA +YTHFTSP+RRY D++ HR L AA++ E
Sbjct: 734 ATRCMLSAEYFCTGSVPRNA-FGHYGLAMDMYTHFTSPIRRYADVLAHRQLAAAIQYEPL 792
Query: 864 --KLYWKH 869
LY KH
Sbjct: 793 PSNLYSKH 800
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Query: 147 DNPSHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLI 206
D+ SH +IF +W + + G K + NA+N LE + + + +L+
Sbjct: 178 DDDSHTQPRGTRIFDEYWPASQLEAGFKAGTLHKGFFNANAYNFLEGTVRSDSLSKPILL 237
Query: 207 TGIAAQNRAVEGDFVLIKVDRLSLWAKMKGFSN 239
G + NRAV+GD V + + S W KG S+
Sbjct: 238 QGRDSMNRAVDGDVVYVALLPKSEW---KGASD 267
>gi|225010325|ref|ZP_03700797.1| ribonuclease R [Flavobacteria bacterium MS024-3C]
gi|225005804|gb|EEG43754.1| ribonuclease R [Flavobacteria bacterium MS024-3C]
Length = 736
Score = 252 bits (644), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 157/433 (36%), Positives = 225/433 (51%), Gaps = 32/433 (7%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAIL------YENAICCSGFSPESLSC 493
V + +W + S P+ + V G GE + +I+AIL YE S F+ +
Sbjct: 192 VVVELTKWEQNSSSPEGKITQVLGVPGEHQTEIHAILAAYGLPYEFPFEVSEFANQ---- 247
Query: 494 LPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSY 553
+ + E+ R+D+R+ FTIDP A D DDALS ++L +G +G+HIADVS+
Sbjct: 248 ---IDTSIQASEIAKRRDMRDVLTFTIDPKDAKDFDDALSFQKLDNGHFEIGIHIADVSH 304
Query: 554 FVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGD 613
++ T LD EA R+TSVY++ R +PMLP +LS E SL P ++ FS +++N
Sbjct: 305 YLQEDTVLDDEAFQRATSVYLVDRVVPMLPEVLSNEACSLRPHEEKYTFSAIFEINHQAQ 364
Query: 614 VVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVR-SIK 672
+V W GRTVI S + +YE AQ II+ + SN + ++ S+ ++ ++
Sbjct: 365 IVSEWFGRTVINSNERFAYEEAQHIIETE-----SNEIPANISIRETAYKVSNEIKEAVL 419
Query: 673 SLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANK 732
+L ++KIL+ KR GA+ + + F DE P +D N L EEFMLLANK
Sbjct: 420 TLDNLAKILRTKRMKQGAISFDKVEVRFALDEDFNPTTVFFKESKDANKLIEEFMLLANK 479
Query: 733 TAAEVIARAFPDSALLRR-HPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQARE- 790
A I + P+ + R H P+ KL + S+ G QLD S +QSL +
Sbjct: 480 QVAAFIGKQKPEKPFVYRVHDEPDEDKLIALQGVVSRFGHQLDFKSKVTMNQSLNTLLQN 539
Query: 791 -KLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPD 849
K K + L D L A R M A Y + GHY LAF YTHFTSP+RRYPD
Sbjct: 540 VKGKKEQNLVDTL---AIRSMSKAIYTTD-------NIGHYGLAFEHYTHFTSPIRRYPD 589
Query: 850 LVVHRTLNAALEA 862
++VHR L LE
Sbjct: 590 VMVHRLLQYYLEG 602
>gi|302675629|ref|XP_003027498.1| hypothetical protein SCHCODRAFT_83349 [Schizophyllum commune H4-8]
gi|300101185|gb|EFI92595.1| hypothetical protein SCHCODRAFT_83349 [Schizophyllum commune H4-8]
Length = 988
Score = 252 bits (644), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 182/535 (34%), Positives = 260/535 (48%), Gaps = 65/535 (12%)
Query: 347 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 406
K+PTGRVV II+R+ W +Y + + N ++ S + + PT
Sbjct: 371 KQPTGRVVGIIKRN--------------WRSYVCHIDRASLSNAAATS-HALQSVFAQPT 415
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 466
+ P++ + + P I ++ + ID W+ S +P+ H + G G
Sbjct: 416 ARQLPRIRMRTRQAPRLIGQK------------ILVTIDRWDATSRYPEGHFVRALGAVG 463
Query: 467 EVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVP---------QEELLSRKDLRNF 515
E + ++L E + F LSCLP W VP + R+DLR
Sbjct: 464 GKETEQESLLLEFDVPYRPFGAAVLSCLPPEGDSWVVPPRPDDTAVDKGAWRDREDLRGE 523
Query: 516 CIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYML 575
I +IDP D+DDAL ++L +G GVHIADVS+FVLP A+D EA R T+VY++
Sbjct: 524 IICSIDPPGCQDIDDALHAKQLPNGNIEAGVHIADVSHFVLPDNAMDHEAASRGTTVYLV 583
Query: 576 QRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHA 635
++I MLP LL + SL P V+RLAFS W+L ++V+ ++VI S +YE A
Sbjct: 584 DKRIDMLPSLLGTNLCSLRPFVERLAFSAIWELTPEAEIVNVRFTKSVIASKAAFTYEEA 643
Query: 636 QDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLEN 695
Q D DV + L SI+ L ++ LK KR GAL L +
Sbjct: 644 QIRKD---DVHQQDAL----------------TNSIRLLNSLAIRLKAKRMAAGALNLAS 684
Query: 696 SKPVFLFD--EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPA 753
+ D E P D + N L EEFMLLAN + A I F +A+LRRH
Sbjct: 685 PEVKIHLDSAESSDPIDVEQKELRETNSLVEEFMLLANISVARKIQETFVQTAVLRRHLP 744
Query: 754 PNMRKLREFEAFCSKH-GLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQ 811
P + + K GL+LD SSSG SL++ + + F+ L+ ATR M
Sbjct: 745 PPRDNFKNLQDILKKRKGLELDVSSSGALAASLDKC---IDPNEPAFNTLVRIMATRCML 801
Query: 812 LASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
A YF +G +T +GHY LA +YTHFTSP+RRY D++VHR L+AA+ L+
Sbjct: 802 SAEYFAAGSVARET-YGHYGLASEIYTHFTSPIRRYADVLVHRQLSAAIGHTPLH 855
>gi|300774533|ref|ZP_07084396.1| ribonuclease R [Chryseobacterium gleum ATCC 35910]
gi|300506348|gb|EFK37483.1| ribonuclease R [Chryseobacterium gleum ATCC 35910]
Length = 717
Score = 252 bits (644), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 154/450 (34%), Positives = 232/450 (51%), Gaps = 41/450 (9%)
Query: 420 LPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYEN 479
+P + E+GD I ++ EW P+ ++ V G GE E +I++IL E
Sbjct: 180 IPKTKFNNAEDGDKVI------VKMTEWKPGDKNPEGEIIQVLGAPGEHETEIHSILAEY 233
Query: 480 AICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSD 539
+ F E + + + EE+ R D+R C FTIDP A D DDALSI +L +
Sbjct: 234 GLPYE-FPQEVEADADKIDRSITDEEVAKRWDMRKICTFTIDPKDAKDFDDALSIRKLEN 292
Query: 540 GISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDR 599
G +GVHIADVS++V+PGT LD EA R+TSVY++ R +PMLP +LS +V SL P D+
Sbjct: 293 GNWEIGVHIADVSHYVVPGTILDDEAYQRATSVYLVDRVVPMLPEVLSNDVCSLRPNEDK 352
Query: 600 LAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLY 659
FS ++LN ++ +W GRTVI S + +YE AQ+ I+ G+G
Sbjct: 353 YTFSAVFELNDQAEIQKQWFGRTVIHSDRRFTYEEAQERIE----------TGKG----- 397
Query: 660 GQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDL 719
D+ I +L +++KI++++R GA+ + S+ F DE P +D
Sbjct: 398 ------DLAEEINTLDKLAKIMRNERIRKGAITFDRSEVRFNLDENNEPVGVYFKISKDS 451
Query: 720 NFLFEEFMLLANKTAAEVIA-----RAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLD 774
N L EEFMLLANK +E ++ ++ + R H P+ KL F + G +++
Sbjct: 452 NHLIEEFMLLANKKVSEFVSLTRKGEITNNTFIYRVHDDPDPAKLESLRDFVATFGYKMN 511
Query: 775 TSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAF 834
+++ + +SL + +K +++ A R M A Y GHY L F
Sbjct: 512 LANTKKVAESLNKLLHDVKGKGEE-NMIETLAMRSMSKAVYSTE-------PIGHYGLGF 563
Query: 835 PVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
Y+HFTSP+RRYPDL+ HR L L+ K
Sbjct: 564 EYYSHFTSPIRRYPDLLAHRLLQHYLDGGK 593
>gi|423226569|ref|ZP_17213034.1| ribonuclease R [Bacteroides cellulosilyticus CL02T12C19]
gi|392629048|gb|EIY23064.1| ribonuclease R [Bacteroides cellulosilyticus CL02T12C19]
Length = 714
Score = 252 bits (644), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 156/433 (36%), Positives = 226/433 (52%), Gaps = 53/433 (12%)
Query: 442 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWE 500
++ EW +++ P V+ + G+ G+ +++AIL E + P S+ +P E
Sbjct: 193 VKVIEWPDKAKNPIGQVIDILGKAGDNTTEMHAILAEFGLPY--VYPSSVEKAADKIPAE 250
Query: 501 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 560
+ EE+ R+D RN FTIDP A D DDALSI +L DG+ VGVHIADV+++V G+
Sbjct: 251 ISDEEIAKREDFRNVTTFTIDPKDAKDFDDALSIRKLKDGLWEVGVHIADVTHYVTEGST 310
Query: 561 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIG 620
+D EA+ R+TSVY++ R IPMLP L + SL P ++LA+S+ +++N GDV D +
Sbjct: 311 IDKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPDEEKLAYSVIFNINEKGDVKDSRVV 370
Query: 621 RTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKI 680
TVI+S + +YE AQ II+ K EG D I L ++K
Sbjct: 371 HTVIKSDRRFTYEEAQQIIETK----------EG-----------DFKEEILMLDTIAKA 409
Query: 681 LKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVI-- 738
L+ KRF GA+ + + F DE G P +D N L EEFMLLAN+T AE I
Sbjct: 410 LRQKRFVAGAINFDRYEVKFEIDEKGKPISVYFKVSKDANKLVEEFMLLANRTVAEKIGR 469
Query: 739 ------ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQ 787
A+ FP R H P+ KL F ++ G ++ T S + L+
Sbjct: 470 VPKNKKAKVFP----YRIHDLPDPEKLDNLAQFIARFGYKIRTGGTKTDVSKSINHLLDD 525
Query: 788 AREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRY 847
+ K ++ +++ + R MQ A Y + GHY LAF YTHFTSP+RR+
Sbjct: 526 IQGKKEE-----NLIETVSIRAMQKARYSTH-------NIGHYGLAFEYYTHFTSPIRRF 573
Query: 848 PDLVVHRTLNAAL 860
PD++VHR L L
Sbjct: 574 PDMMVHRLLTKYL 586
>gi|449015425|dbj|BAM78827.1| mitotic control protein dis3 [Cyanidioschyzon merolae strain 10D]
Length = 1048
Score = 252 bits (644), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 193/575 (33%), Positives = 287/575 (49%), Gaps = 72/575 (12%)
Query: 316 SDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRP-TGRVVSIIERSPRRDGIVGFLNVNQ 374
S TE+V ++ G + S ++S P++ P G++V+++ER +
Sbjct: 340 SSVTEQVVTAASALGSES----SDPLASTPSQGPRLGKIVAVLER--------------R 381
Query: 375 WFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDAT 434
W GS + AK +LS R P + P +++ KR
Sbjct: 382 WRAQYCGSLQ-AKYTADTLSFQGRRRHLFLPVDRRIPPILLETLQAASLYGKR------- 433
Query: 435 IEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCL 494
VA +D W+ +S FP HV+ V GR G+ + + +L EN I FS +L+CL
Sbjct: 434 -----VAVALDRWDTQSRFPVGHVVSVLGRIGDEQVETQVLLLENGIVTRPFSEAALACL 488
Query: 495 PCVPWEV---PQEE-LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGIS-------- 542
P + V P + L+ R DLR+ +F+IDP TD+DDAL RL D +
Sbjct: 489 PPPDFSVAPAPMDTTLVGRLDLRSMFVFSIDPPGCTDIDDALHC-RLVDRSNGQGANARA 547
Query: 543 ----RVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVD 598
+VGVHIADV+ FV GTALD EA+ R +VY++ ++I MLP LL+ + SL G D
Sbjct: 548 STRLQVGVHIADVASFVRAGTALDEEARERGCTVYLVDQRIEMLPALLTSNLCSLVAGKD 607
Query: 599 RLAFSIFWDLN-SAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDG-KFDVESSNTLGEGWP 656
R AFS+ ++L+ + + D R++IRS L+YE AQ ++D D +S+ L G P
Sbjct: 608 RYAFSVLFELDVESAQINDVQFTRSMIRSRASLTYEQAQLMLDALVVDKQSAKQL--GIP 665
Query: 657 QLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGR 716
G+ ++ L V+ L+ +R +GAL L + P F+ S G
Sbjct: 666 PELGE--------ALPLLARVAGRLRAERLANGALIL--ASPEIRFERADGESPSPSVGS 715
Query: 717 E------DLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHG 770
D + L EEFMLLAN T A+ I FP SA LRRHP P++ + + +G
Sbjct: 716 GSSCRSFDTHHLVEEFMLLANVTVAKRIVHQFPHSACLRRHPPPSVEQFEPLVRAAAAYG 775
Query: 771 LQLDTSSSGQFHQSLE--QAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWG 828
+++ SS SL+ ++D +L ++ ATR M A+Y CS + +
Sbjct: 776 IEMHVDSSKALAASLDAVSTTSAGQEDPLLEELFRMLATRCMMQAAY-CSAGSAPASSYY 834
Query: 829 HYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE 863
HY LA P+YTHFTSP+RRY D++VHR L A+L E
Sbjct: 835 HYGLAVPLYTHFTSPIRRYADIIVHRQLAASLGYE 869
>gi|402077965|gb|EJT73314.1| mitotic control protein dis3 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 991
Score = 252 bits (644), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 187/553 (33%), Positives = 264/553 (47%), Gaps = 60/553 (10%)
Query: 322 VSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG 381
VS ++ ++R+ A + +PT +VV +I+R+ W Y G
Sbjct: 359 VSEKERKALQEEVKRMQAK-GAEAQAQPTAKVVGVIKRN--------------WRQYVGH 403
Query: 382 SRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVA 441
+ + ++S+ +E + L P K PK+ + + + + + KR +
Sbjct: 404 IDQTSV-SQSATQGRKQETVFLIPMDKKVPKIRLRTRQVGELLGKR------------IL 450
Query: 442 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP--CVPW 499
ID W+ +S P H + G + A+L E + F L CLP W
Sbjct: 451 VTIDAWDRDSRHPVGHFVRSLGELETKAAETEALLLEYDVQYRPFPKTVLDCLPKEGHDW 510
Query: 500 EVPQEE----LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFV 555
VP R+DLR I +IDP D+DDAL L +G VGVHIADVS+FV
Sbjct: 511 RVPASTEDPGWRDREDLRPLLICSIDPIGCQDIDDALHARTLPNGNFEVGVHIADVSHFV 570
Query: 556 LPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV 615
P A+D EA +R T+VY++ ++I MLP+LL ++ SL P V+R AFS+ W++ + +VV
Sbjct: 571 KPNNAMDTEASIRGTTVYLVDKRIDMLPMLLGTDLCSLKPYVERYAFSVLWEMTAEAEVV 630
Query: 616 DRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 675
++VI+S SYE AQ ID D ++ L EG I++L
Sbjct: 631 GVRFTKSVIKSREAFSYEQAQIRID---DASQTDELTEG----------------IRTLL 671
Query: 676 EVSKILKDKRFTDGALRLENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTA 734
+SK LK KR GAL L + + V + E P D D L EEFMLLAN +
Sbjct: 672 RLSKKLKQKRMDAGALSLSSPEVKVQMESETSDPIDIKTKVHLDTMSLVEEFMLLANISV 731
Query: 735 AEVIARAFPDSALLRRHPAPNMRKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLK 793
A I A P +A+LRRH AP E K G +L SS SL+ E
Sbjct: 732 AGKIYEASPQTAILRRHGAPPKTNFDELANQLRVKKGFELRADSSRALADSLDACVEPAD 791
Query: 794 DDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 852
F+ L+ ATR M A YFCSG + ++ HY LA +YTHFTSP+RRY DLV
Sbjct: 792 P---FFNTLVRIMATRCMMSAEYFCSGT-QAYPEFRHYGLASEIYTHFTSPIRRYADLVA 847
Query: 853 HRTLNAALEAEKL 865
HR L AA+ E +
Sbjct: 848 HRQLAAAIGYEAV 860
>gi|365877396|ref|ZP_09416900.1| rnase r [Elizabethkingia anophelis Ag1]
gi|442587671|ref|ZP_21006486.1| ribonuclease R [Elizabethkingia anophelis R26]
gi|365754829|gb|EHM96764.1| rnase r [Elizabethkingia anophelis Ag1]
gi|442562525|gb|ELR79745.1| ribonuclease R [Elizabethkingia anophelis R26]
Length = 717
Score = 252 bits (644), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 154/432 (35%), Positives = 228/432 (52%), Gaps = 39/432 (9%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 499
V ++ W+++S P+ ++ V G GE E +I+AIL E + + F PE + +
Sbjct: 194 VIVKMLGWDDKSKNPEGEIVDVLGHPGEHETEIHAILAEYGLPYN-FPPEVEAEAQKIDK 252
Query: 500 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 559
+ ++E+ R D+R+ FTIDP A D DDALS+ +L +G VGVHIADVSY+V PGT
Sbjct: 253 TLSEQEIAKRWDMRDILTFTIDPKDAKDFDDALSLRKLENGNIEVGVHIADVSYYVQPGT 312
Query: 560 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 619
LD EA R+TS+Y++ R +PMLP +LS E+ SL P D+ FS ++LN ++ +W
Sbjct: 313 LLDQEAYDRATSIYLVDRVVPMLPEVLSNELCSLRPNEDKFTFSAVFELNDKAEIQKQWF 372
Query: 620 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 679
GRTVI S + SYE AQ+ I+ K EG D+ I L ++K
Sbjct: 373 GRTVINSDRRFSYEEAQERIETK----------EG-----------DLAEEINLLDSLAK 411
Query: 680 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 739
IL+ R GA+ + ++ F +E P +D N L EEFMLLANK +E ++
Sbjct: 412 ILRKDRMKHGAIAFDRAEVRFNLNEESQPIGVYFKISKDANHLIEEFMLLANKKVSEFVS 471
Query: 740 -----RAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQ--AREKL 792
++ + R H P+ KL F G +++ S+ + +S+ + A K
Sbjct: 472 LTRKNEPTNNTFIYRIHDDPDPTKLASLRDFVHTFGYKMNISNRNKISESMNKLLAEVKG 531
Query: 793 KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 852
K + + + L A R M A Y + GHY LAF Y+HFTSP+RRYPD++
Sbjct: 532 KGEENMIETL---AMRSMSKAVYSTE-------NIGHYGLAFEYYSHFTSPIRRYPDVMA 581
Query: 853 HRTLNAALEAEK 864
HR L L+ K
Sbjct: 582 HRLLQHYLDGGK 593
>gi|332291802|ref|YP_004430411.1| ribonuclease R [Krokinobacter sp. 4H-3-7-5]
gi|332169888|gb|AEE19143.1| ribonuclease R [Krokinobacter sp. 4H-3-7-5]
Length = 734
Score = 252 bits (643), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 170/548 (31%), Positives = 268/548 (48%), Gaps = 68/548 (12%)
Query: 328 NDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAK 387
N +N E + +K+ G + II+R + + VG + + + F
Sbjct: 113 NKALNGDEVEVYIYRQRRSKKHEGEITKIIKR--KTEEFVGVVKLQKKF----------- 159
Query: 388 KNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEW 447
++ + ++ Y + V +K L + E+GD V I++W
Sbjct: 160 -----------AFVLTSESNKMYTDVFVPLKKLG-----KAEDGDK------VVVTIEDW 197
Query: 448 NEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELL 507
+++ P + V G+ GE +I++IL + + F E + + EE+
Sbjct: 198 PDKADSPFGRITKVLGKPGEHNTEIHSILAQYGLPYE-FPEEVEEFANKIDTSIKAEEIA 256
Query: 508 SRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQV 567
R+D+R+ +TIDP A D DDALS ++L +G +G+HIADVS++++PGT LD EA
Sbjct: 257 KRRDMRDVLTYTIDPKDAKDFDDALSFQKLENGNYEIGIHIADVSHYLVPGTILDDEAYE 316
Query: 568 RSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNS-AGDVVDRWIGRTVIRS 626
R+TSVY++ R +PMLP +LS SL P ++ FS +++ + +G +VD W GRTV S
Sbjct: 317 RATSVYLVDRVVPMLPEILSNGACSLRPHEEKYTFSAVFEMKADSGKIVDSWYGRTVTYS 376
Query: 627 CCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQ-FEWSD-VVRSIKSLYEVSKILKDK 684
+ +YE AQ II ES + L L G+ ++ SD +V + + ++KI++ +
Sbjct: 377 DARFAYEEAQAII------ESRSNLIPAEVSLTGEAYKVSDELVEATLEMDRIAKIMRRQ 430
Query: 685 RFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPD 744
R DGA+ + + F D+ P +D N L EEFMLLAN+ +E I + P
Sbjct: 431 RMKDGAISFDKVEVKFKLDDDMNPEGVYFKTSKDANKLIEEFMLLANRKVSEFIGKQAPK 490
Query: 745 SALLRR-HPAPNMRKLREFEAFCSKHGLQLD-------TSSSGQFHQSLEQAREKLKDDY 796
+ R H PN KL E K G +LD TSS Q ++ +E+
Sbjct: 491 KTFVYRIHDEPNDEKLASLEKVIGKFGYKLDLKDRKTTTSSLNQLLTDVQGKKEQ----- 545
Query: 797 VLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTL 856
+++ A R M A Y + GHY LAF Y+HFTSP+RRYPD++VHR L
Sbjct: 546 ---NMVDTLAIRTMSKAVYSTD-------NIGHYGLAFDYYSHFTSPIRRYPDVMVHRLL 595
Query: 857 NAALEAEK 864
L+ K
Sbjct: 596 QHYLDGGK 603
>gi|224537309|ref|ZP_03677848.1| hypothetical protein BACCELL_02187 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521084|gb|EEF90189.1| hypothetical protein BACCELL_02187 [Bacteroides cellulosilyticus
DSM 14838]
Length = 714
Score = 252 bits (643), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 156/433 (36%), Positives = 226/433 (52%), Gaps = 53/433 (12%)
Query: 442 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWE 500
++ EW +++ P V+ + G+ G+ +++AIL E + P S+ +P E
Sbjct: 193 VKVIEWPDKAKNPIGQVIDILGKAGDNTTEMHAILAEFGLPY--VYPSSVEKAADKIPAE 250
Query: 501 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 560
+ EE+ R+D RN FTIDP A D DDALSI +L DG+ VGVHIADV+++V G+
Sbjct: 251 ISDEEIAKREDFRNVSTFTIDPKDAKDFDDALSIRKLKDGLWEVGVHIADVTHYVTEGSI 310
Query: 561 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIG 620
+D EA+ R+TSVY++ R IPMLP L + SL P ++LA+S+ +++N GDV D +
Sbjct: 311 IDKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPDEEKLAYSVIFNINEKGDVKDSRVV 370
Query: 621 RTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKI 680
TVI+S + +YE AQ II+ K EG D I L ++K
Sbjct: 371 HTVIKSDRRFTYEEAQQIIETK----------EG-----------DFKEEILMLDTIAKA 409
Query: 681 LKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVI-- 738
L+ KRF GA+ + + F DE G P +D N L EEFMLLAN+T AE I
Sbjct: 410 LRQKRFVAGAINFDRYEVKFEIDEKGKPISVYFKVSKDANKLVEEFMLLANRTVAEKIGR 469
Query: 739 ------ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQ 787
A+ FP R H P+ KL F ++ G ++ T S + L+
Sbjct: 470 VPKNKKAKVFP----YRIHDLPDPEKLDNLAQFIARFGYKIRTGGTKTDVSKSINHLLDD 525
Query: 788 AREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRY 847
+ K ++ +++ + R MQ A Y + GHY LAF YTHFTSP+RR+
Sbjct: 526 IQGKKEE-----NLIETVSIRAMQKARYSTH-------NIGHYGLAFEYYTHFTSPIRRF 573
Query: 848 PDLVVHRTLNAAL 860
PD++VHR L L
Sbjct: 574 PDMMVHRLLTKYL 586
>gi|325187035|emb|CCA21578.1| DIS3like exonuclease 1 putative [Albugo laibachii Nc14]
gi|325189780|emb|CCA24260.1| DIS3like exonuclease 1 putative [Albugo laibachii Nc14]
Length = 1318
Score = 252 bits (643), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 200/706 (28%), Positives = 324/706 (45%), Gaps = 100/706 (14%)
Query: 316 SDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQW 375
SD +SSS +D M ++E S + TGR++++I RS R I+ +
Sbjct: 351 SDDNPVLSSSPFDDVMLSVE-------STASGWATGRIINVISRSHRV--IIATIPSKM- 400
Query: 376 FNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATI 435
KGG + ++L++P ++ K+ + L KRL+
Sbjct: 401 --IKGG-------DNTALAIP---------VSMRFSKVRIRSNHLDILTDKRLK------ 436
Query: 436 EMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP 495
ID W +S +P H + + G +V +++AIL EN + S FS +++CLP
Sbjct: 437 ------IIIDSWPIDSAYPHGHYIGILGNVQDVTTEVSAILVENELIESPFSQAAIACLP 490
Query: 496 -------------------------CVPWEVPQEE--LLSRKDLRN-FCIFTIDPSTATD 527
+ WE+P EE + R+DLR +F++DP+ D
Sbjct: 491 RISEAVMESYQIAECCTAKRPSKCPLLEWEIPTEEFEMSLRRDLRTTHKVFSVDPAGCQD 550
Query: 528 LDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLS 587
+DDA+SI LS+G +GVHIADVSYFV P +ALD EA+ R TSVY++ +++ M+P +LS
Sbjct: 551 IDDAMSISVLSNGNIELGVHIADVSYFVKPESALDCEARRRGTSVYLVGQRLDMIPAVLS 610
Query: 588 EEVGSLNPGVDRLAFSIFWDLNSAGDVV---DRWIGRTVIRSCCKLSYEHAQDIIDGKFD 644
++ SL+ DRLA S+ W++N+ V WIGRT +RSC L+YE A I+ K
Sbjct: 611 ADLCSLHHSRDRLAVSVIWEVNATSLAVVEDKTWIGRTAVRSCASLTYEQAHGILHNKPI 670
Query: 645 VESS-----NTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPV 699
SS +G P + + ++ L ++++ L+ R +G L L S+ V
Sbjct: 671 PASSIPDNVGMVGGDIPNALKRH----LREGLQHLTQIARTLERSRMQNGGLDLSRSEEV 726
Query: 700 FL---FDEYGTPYDSVLSGRE-DLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPN 755
+ P SV S +++ E M+L N T A+ I +AFP ALLRRH P+
Sbjct: 727 HIALGASNLKDPDVSVDSCENLEIHHTIAEIMILTNTTVAKKIFQAFPQHALLRRHLPPS 786
Query: 756 MRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASY 815
+ + +G++ D +++ QS+ + D +L + R MQ A Y
Sbjct: 787 SSRFSQVLDIARVNGIKFDPTTNSTLQQSILRCENSGVMDSKTMALLKSLVVREMQQAEY 846
Query: 816 FC-----------SGDFKD-DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE 863
C + + KD D HY L YTHFTSP+RRY D+VVHR L ++
Sbjct: 847 ICAHEALAAPRMIAANAKDYDNRIAHYGLGVECYTHFTSPIRRYADIVVHRQLLQVVQES 906
Query: 864 KLYWKHRRML--PKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADI- 920
K +L P++ + L E +E R + + G P +
Sbjct: 907 SKITKPAILLPIPQSASMPLDQSDELLDDLIAHVHGELIECRPEETSPSRDVGTPGVPLT 966
Query: 921 -LVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLFSCLILYL 965
L+ + H N + + + C +L++ + + +++ +I L
Sbjct: 967 DLIQMTHHLNVKHQSAKRASQQCKELFLALYFSENKIVTVGIITSL 1012
>gi|86144129|ref|ZP_01062466.1| putative exoribonuclease [Leeuwenhoekiella blandensis MED217]
gi|85829391|gb|EAQ47856.1| putative exoribonuclease [Leeuwenhoekiella blandensis MED217]
Length = 734
Score = 252 bits (643), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 173/525 (32%), Positives = 256/525 (48%), Gaps = 58/525 (11%)
Query: 346 TKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTP 405
+K+ G +V I+ER + D VG + + + F + S + K R+ + VP
Sbjct: 132 SKKHEGEIVEILER--KTDEFVGVVQMQKNFAFVNTSAEG--KMRTDIFVP--------- 178
Query: 406 THPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRG 465
K +L + + E V +I++W E++ P ++ V G
Sbjct: 179 -------------------KNKL---NGAQDGEKVLVKIEDWPEKADSPFGKIIKVLGLP 216
Query: 466 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
GE +I++IL + + F E + + + EE+ R+D+R+ FTIDP A
Sbjct: 217 GEHNTEIHSILAQYGLPHD-FPNEVEAYANTIDTSIKPEEIAKRRDMRDVLTFTIDPKDA 275
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
D DDALS + L +G VG+HIADVS++V+PGT LD EA R+TSVY++ R +PMLP +
Sbjct: 276 KDFDDALSFQVLENGNYEVGIHIADVSHYVVPGTILDEEAYERATSVYLVDRVVPMLPEV 335
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLN-SAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFD 644
LS SL P ++ FS ++L+ S+G V +W GRTV S + +YE AQ II
Sbjct: 336 LSNNACSLRPNEEKYTFSAVFELDKSSGKVKKQWFGRTVTYSDARFAYEEAQQII----- 390
Query: 645 VESSNTLGEGWPQLYGQFEWSD--VVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
E+ L L G+ D +V + L ++KI++ +R DGA+ + + F
Sbjct: 391 -ETREGLIPEDISLTGKSYNVDPAIVNATLELDRIAKIMRRQRMKDGAISFDKVEVKFEL 449
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRR-HPAPNMRKLRE 761
D+ P +D N L EEFMLLAN+ AE I + P + R H PN KL
Sbjct: 450 DQENDPVGVFFKSSKDANKLIEEFMLLANRKVAEFIGKQSPKKTFVYRIHDEPNDEKLAA 509
Query: 762 FEAFCSKHGLQLDTSSSGQFHQSLEQAREKL--KDDYVLFDILINYATRPMQLASYFCSG 819
+ + G +++ SL + K + L D L A R M A Y
Sbjct: 510 LQTIAGRFGYKMNLKDRKSTTASLNNLLTDVVGKKEQNLIDTL---AIRTMSKAVYSTE- 565
Query: 820 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
+ GHY LAF YTHFTSP+RRYPD++VHR L L+ K
Sbjct: 566 ------NIGHYGLAFDYYTHFTSPIRRYPDVMVHRLLQHYLDQGK 604
>gi|426192156|gb|EKV42094.1| hypothetical protein AGABI2DRAFT_212705 [Agaricus bisporus var.
bisporus H97]
Length = 995
Score = 252 bits (643), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 184/535 (34%), Positives = 260/535 (48%), Gaps = 69/535 (12%)
Query: 347 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNY--KGGSRKDAKKNRSSLSVPDREYIQLT 404
++PTGRVV II+R+ W Y S N +SL+ ++ + T
Sbjct: 374 RQPTGRVVGIIKRN--------------WRAYVCHIDSTSLTSLNATSLA---QQTVFAT 416
Query: 405 PTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGR 464
P P++ + + P I ++ + ID W+ S +P+ H + G+
Sbjct: 417 PVSRLLPRIRLRTRQAPTLIGQK------------ILVTIDRWDINSRYPEGHFVRSLGK 464
Query: 465 GGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQE-----ELLSRKDLRNFCI 517
E + +++ E + F L CLP W VP + E +R+DLR I
Sbjct: 465 VESKEAEQESLMLEFDVRYRPFGKAILDCLPPQGEQWVVPPKDDVNPEWKNREDLRQLLI 524
Query: 518 FTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 577
+IDP D+DDAL L +G GVHIADVS+FV T +D EA R T+VY++ R
Sbjct: 525 CSIDPPGCQDIDDALHARPLPNGNIEAGVHIADVSHFVHADTPIDNEAADRGTTVYLVDR 584
Query: 578 KIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQD 637
+I MLP LL + SL P V+RLAFS W+L ++V+ ++VI S +YE AQ
Sbjct: 585 RIDMLPSLLGTNLCSLRPFVERLAFSAIWELTPEAEIVNVRFTKSVIASKAAFTYEEAQI 644
Query: 638 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 697
D P + D+ SI+ L ++K LK+KR GAL L + +
Sbjct: 645 RKDD--------------PN-----QQDDLSHSIRLLNTLAKKLKEKRMKAGALNLASPE 685
Query: 698 PVFLFD--EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH---P 752
D E P D + N L EEFMLLAN + AE I FP +A+LRRH P
Sbjct: 686 VKIYLDSSESSDPIDVEQKELRETNSLVEEFMLLANISVAEKIQETFPQTAVLRRHLPPP 745
Query: 753 APNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQ 811
N KL++ + G++LD SSS SL+ + + F+ L+ ATR M
Sbjct: 746 KANFEKLQDI--LMKRRGIKLDVSSSRALADSLDTCVDPQEPS---FNTLVRIMATRCML 800
Query: 812 LASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
A YFCSG DT +GHY LA +YTHFTSP+RRY D++ HR L AA+ L+
Sbjct: 801 SAEYFCSGSVARDT-FGHYGLASAIYTHFTSPIRRYADVLAHRQLAAAIGNSPLH 854
>gi|444319726|ref|XP_004180520.1| hypothetical protein TBLA_0D05070 [Tetrapisispora blattae CBS 6284]
gi|387513562|emb|CCH61001.1| hypothetical protein TBLA_0D05070 [Tetrapisispora blattae CBS 6284]
Length = 997
Score = 252 bits (643), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 170/455 (37%), Positives = 238/455 (52%), Gaps = 47/455 (10%)
Query: 438 ELVAARI----DEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSC 493
ELV RI D W +P H + G V+ + ++L E+ + FS + L C
Sbjct: 439 ELVGRRIVISVDSWPANHKYPLGHFVRDLGEVESVQAETESLLLEHDVEYRPFSKKVLDC 498
Query: 494 LPCV--PWEVPQE-----------ELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDG 540
LP W+VP + +L RKDLR+ I +IDP D+DDAL ++L +G
Sbjct: 499 LPSEGHEWKVPSDLTSSDALAKDPQLARRKDLRDKLICSIDPPGCVDIDDALHAKKLPNG 558
Query: 541 ISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRL 600
VGVHIADV++FV P T LD E R TSVY++ ++I MLP+LL ++ SL P VDR
Sbjct: 559 NWEVGVHIADVTHFVKPNTPLDAEGASRGTSVYLVDKRIDMLPLLLGTDLCSLKPYVDRY 618
Query: 601 AFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYG 660
AFS+ W+L+ ++VD ++VIRS SYE AQ ID K ++ L +G
Sbjct: 619 AFSVLWELDDNANIVDVNFTKSVIRSREAFSYEQAQIRIDDK---SQTDELTQG------ 669
Query: 661 QFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFLFDEYGTPYDSVLSGREDL 719
+++L ++S LK KR GAL L + + V + E P + +
Sbjct: 670 ----------MRALLKLSIKLKQKRLDAGALNLASPEVKVHMDSETSDPNEVEIKKLLAT 719
Query: 720 NFLFEEFMLLANKTAAEVIARAFPDSALLRRH---PAPNMRKLREFEAFCSKHGLQLDTS 776
N L EEFMLLAN + A I +FP +A+LRRH P+ N L E + + +
Sbjct: 720 NSLVEEFMLLANISVARKIFESFPQTAMLRRHGVPPSTNFETLNEM--LHQRKQMTISLE 777
Query: 777 SSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFP 835
SS SL++ + KD Y F+ LI +TR M A YF SG + +++ HY LA
Sbjct: 778 SSKALADSLDRCVDP-KDPY--FNTLIRIMSTRCMMAAQYFYSGAYS-YSEFRHYGLAVD 833
Query: 836 VYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR 870
+YTHFTSP+RRY D+V HR L A+ E L HR
Sbjct: 834 IYTHFTSPIRRYCDVVAHRQLAGAIGYEPLDLSHR 868
>gi|429752870|ref|ZP_19285703.1| ribonuclease R [Capnocytophaga sp. oral taxon 326 str. F0382]
gi|429175557|gb|EKY16995.1| ribonuclease R [Capnocytophaga sp. oral taxon 326 str. F0382]
Length = 763
Score = 252 bits (643), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 155/426 (36%), Positives = 226/426 (53%), Gaps = 16/426 (3%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC-VP 498
V RI++W ++S P V + G+ GE ++++IL E + + PE + +
Sbjct: 224 VIVRIEDWKDKSDSPMGVVEQILGKPGEQTTEMHSILAEYGLPYT--YPEEVEAFAKKLD 281
Query: 499 WEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPG 558
+ EE+ R+D+R FTIDP A D DDALS + L +G +GVHIADVS++V G
Sbjct: 282 LSITDEEIARRRDMRETLTFTIDPRDAKDFDDALSFKLLENGNYEIGVHIADVSHYVKEG 341
Query: 559 TALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW 618
T LD EA R+TSVY++ R +PMLP +L SL P D+ FS +++N +VVD W
Sbjct: 342 TILDEEAYNRATSVYLVDRVVPMLPEILCNFACSLRPDEDKYTFSAVFEMNKKAEVVDIW 401
Query: 619 IGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVS 678
IGRTV S + +YE AQ +I+ E E + ++VV +I +L ++
Sbjct: 402 IGRTVTHSSFRFAYEEAQSVIEQAKVGEEYTIPAETSITDKERSVPANVVEAILTLNILA 461
Query: 679 KILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVI 738
+ L+ KR GA+ + + F DE G P ++ N L EEFMLLAN+ AE +
Sbjct: 462 EKLRGKRMRLGAITFDKVEVKFDLDENGNPTGVYFKESKEANKLIEEFMLLANRKVAEYV 521
Query: 739 ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKL--KDDY 796
A+ + + R H P+ KL++F ++ G LD + SL E++ K +
Sbjct: 522 AK-MKKTFVYRVHDEPDADKLQQFNTVINRFGYSLDLKNRQTTTDSLNNLLEEVKGKKEQ 580
Query: 797 VLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTL 856
L D L A R M A+Y + GHY LAF YTHFTSP+RRYPD++VHR L
Sbjct: 581 NLVDTL---AIRSMAKATYTTK-------NIGHYGLAFDYYTHFTSPIRRYPDVMVHRLL 630
Query: 857 NAALEA 862
L+
Sbjct: 631 QLYLDG 636
>gi|167763926|ref|ZP_02436053.1| hypothetical protein BACSTE_02308 [Bacteroides stercoris ATCC
43183]
gi|167698042|gb|EDS14621.1| ribonuclease R [Bacteroides stercoris ATCC 43183]
Length = 719
Score = 252 bits (643), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 157/430 (36%), Positives = 225/430 (52%), Gaps = 45/430 (10%)
Query: 442 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWE 500
++ EW +++ P V+ + G+ G+ +++AIL E + P S+ +P E
Sbjct: 197 VKVVEWPDKAKNPIGQVIDILGKAGDNTTEMHAILAEFGLPY--VYPASVEKAADRIPAE 254
Query: 501 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 560
+P EE R+D RN FTIDP A D DDALSI +L D + VGVHIADV+++V G+
Sbjct: 255 IPAEEYAKREDFRNVTTFTIDPKDAKDFDDALSIRKLKDNLWEVGVHIADVTHYVTEGSI 314
Query: 561 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIG 620
+D EA+ R+TSVY++ R IPMLP L + SL P ++LA+S +++ G+V + I
Sbjct: 315 IDKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPDEEKLAYSAIFEMTDKGEVKNSRIV 374
Query: 621 RTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKI 680
TVI+S + +YE AQ II+ K EG D I L ++KI
Sbjct: 375 HTVIKSDRRFTYEEAQQIIETK----------EG-----------DFKEEILKLDSLAKI 413
Query: 681 LKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR 740
L++KRFT GA+ + + F DE G P +D N L EEFMLLAN+T AE I R
Sbjct: 414 LREKRFTAGAINFDRYEVKFEIDEQGKPVSVYFKESKDANKLVEEFMLLANRTVAEKIGR 473
Query: 741 A----FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREK 791
P R H P+ KL F ++ G +L T S + L+ + K
Sbjct: 474 VPKNKKPKVFPYRIHDLPDPEKLDNLAQFIARFGYKLRTGGTKTDVSKSINHLLDDIQGK 533
Query: 792 LKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 851
++ +++ + R MQ A Y + GHY LAF YTHFTSP+RRYPD++
Sbjct: 534 KEE-----NLIETVSIRAMQKARYSVH-------NIGHYGLAFDYYTHFTSPIRRYPDML 581
Query: 852 VHRTLNAALE 861
VHR L L+
Sbjct: 582 VHRLLTKYLD 591
>gi|340517369|gb|EGR47613.1| predicted protein [Trichoderma reesei QM6a]
Length = 985
Score = 252 bits (643), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 211/717 (29%), Positives = 329/717 (45%), Gaps = 123/717 (17%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
++ +++ + ++ G + ++ V+ +N LE K+ +LI G NR+++G
Sbjct: 251 LYPEYYTSSRMMTGVKAGLLHQGIFNVSPYNYLEGSIKVPAFPKPLLILGRENINRSIDG 310
Query: 219 DFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCTL 278
D V++++ W S ++ I+E+ + N + + D
Sbjct: 311 DVVVVELLPQDQWK-----SPSTKIIEEDTITKNENA------DTEERQD---------F 350
Query: 279 LSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLS 338
+S+K ER+ E+V +Q+ G N ++
Sbjct: 351 ISDK------------------ERKALQ-------------EEVKRTQKATGENQLQ--- 376
Query: 339 AMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDR 398
PT +VV +++R+ R+ VG ++ + R+
Sbjct: 377 ----------PTAKVVGVVKRNWRQ--YVGHIDPSTASKAPSQGRR-------------L 411
Query: 399 EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHV 458
+ + L P K PK+ + + + + + KRL LV +D W+ +S P H+
Sbjct: 412 DSVFLIPMDKKIPKIRLRTRQVSELLGKRL----------LVT--VDSWDRDSRHPVGHL 459
Query: 459 LHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP--CVPWEVPQEE----LLSRKDL 512
+ G A+L E + F L CLP W VP+ + R+DL
Sbjct: 460 VRSLGELETKAAATEALLLEWDVQYRPFPKTVLDCLPKEGHDWRVPESKEDPGWRDREDL 519
Query: 513 RNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSV 572
R+ I +IDP D+DDAL L +G VGVHIADVS+FV P A+D EA +R T+V
Sbjct: 520 RDLLICSIDPPGCQDIDDALHARLLPNGNYEVGVHIADVSHFVKPANAMDTEASIRGTTV 579
Query: 573 YMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSY 632
Y++ ++I MLP+LL ++ SL P V+R AF++ W+L+ D+V+ ++VI+S SY
Sbjct: 580 YLVDKRIDMLPMLLGTDLCSLKPYVERFAFTVIWELDENADIVNVRFTKSVIKSREAFSY 639
Query: 633 EHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALR 692
E AQ ID D + L +G ++ L +SK LK KR GAL
Sbjct: 640 EQAQLRID---DASQQDDLTKG----------------MRMLLMLSKKLKKKRMDAGALS 680
Query: 693 LENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH 751
L + + V + E P D D N L EEFML AN + A I AFP +A+LRRH
Sbjct: 681 LSSPEIKVHMESESSDPIDVKTKELLDTNSLVEEFMLFANVSVAAKIYEAFPQTAILRRH 740
Query: 752 PAPNMRKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRP 809
AP E + K GL+L T SS SL++ + + F+ L+ ATR
Sbjct: 741 AAPPKTNFDELADQLRIKRGLELRTDSSKALADSLDKCVDPKEP---FFNTLVRIMATRC 797
Query: 810 MQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
M A YFCSG + ++ HY LA +YTHFTSP+RRY DL+ HR L AA+ E ++
Sbjct: 798 MMSAEYFCSGT-QAYPEFRHYGLASEIYTHFTSPIRRYADLLAHRQLAAAIGYEAVH 853
>gi|193652752|ref|XP_001942877.1| PREDICTED: DIS3-like exonuclease 2-like [Acyrthosiphon pisum]
Length = 820
Score = 252 bits (643), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 169/463 (36%), Positives = 246/463 (53%), Gaps = 23/463 (4%)
Query: 400 YIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIE-MELVAARIDEW-NEESPFPQAH 457
Y L P + P+++V P I+ R D T E EL A W N ++PF
Sbjct: 226 YSTLIPRDCRIPRLLVDTSIWPFPIELR----DGTKESKELFYAVFSRWDNYKTPF--GV 279
Query: 458 VLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCI 517
+ V G G++ + IL + I + PE++ P+ V +EEL RKD R CI
Sbjct: 280 LKGVLGESGKINAETEGILIAHDIQEHPY-PENIDKYFPPPFSV-EEELKHRKDFRKNCI 337
Query: 518 FTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 577
F+IDP TA DLDDALS L +G +G+HI+DVSYFV GT LD A+ +TSVY++Q+
Sbjct: 338 FSIDPPTAKDLDDALSCVPLPNGNFEIGIHISDVSYFVKQGTPLDEIAEKLATSVYLIQK 397
Query: 578 KIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQD 637
MLP L+ + SL PG D+LA SI ++ V+ +++I SC +L Y HAQ
Sbjct: 398 VYHMLPPALT-MMASLLPGTDKLAVSITLEMTPDASVISHSFSQSIIHSCAQLHYAHAQI 456
Query: 638 IIDG--KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLEN 695
++ K D + S +P +Y + SD ++ L++++ +++++RF GAL +
Sbjct: 457 FLENPDKKDWDESE-----FPTVYNGYTVSDCATAVSHLHKLAALMRERRFGSGALAINQ 511
Query: 696 SKPVFLFDEYGT-PYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAP 754
K F D P L + N+L EEFMLLAN AE + FP +A+LR H AP
Sbjct: 512 PKLSFEIDRATCEPLSYSLYILHESNWLIEEFMLLANTMVAEHLKTHFPTTAMLRNHHAP 571
Query: 755 NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILI-NYATRPMQLA 813
++ + + H + +D +S+G H+S + +DI+I N ++PM A
Sbjct: 572 DVAPMEKVVKLLKTHDIDIDFTSAGSIHKSKAVYCQGENSKNSHWDIIINNILSKPMVRA 631
Query: 814 SYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTL 856
Y C D D H+AL P YTHFTSP+RRYPD+VVHR L
Sbjct: 632 EY-CVID--PDRIMSHFALNVPYYTHFTSPIRRYPDIVVHRML 671
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 10/100 (10%)
Query: 142 YTNKDDNPSHQSEARCKIFAP----------HWSMEAVNEALEKGDAFKALYRVNAHNRL 191
Y + NP+ Q+ + P + ++ V + LE GD F+ R++
Sbjct: 87 YEKHNINPNEQNRSTTNTTEPLSNQKDFYLDYMQLDDVKKGLESGDLFEGNIRISQKCPT 146
Query: 192 EAYCKIEGVQTDVLITGIAAQNRAVEGDFVLIKVDRLSLW 231
EAY D+LI GI ++NRA++GD V++K+ S W
Sbjct: 147 EAYVPSPDKSKDILINGIRSRNRALDGDKVVVKILDKSNW 186
>gi|407451488|ref|YP_006723212.1| hypothetical protein B739_0712 [Riemerella anatipestifer RA-CH-1]
gi|403312473|gb|AFR35314.1| hypothetical protein B739_0712 [Riemerella anatipestifer RA-CH-1]
Length = 721
Score = 252 bits (643), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 153/430 (35%), Positives = 226/430 (52%), Gaps = 35/430 (8%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 499
V ++ EWN P ++ V G G E +I++IL E + + F E +
Sbjct: 194 VVVKMVEWNPTEKNPHGEIVKVLGTPGSHETEIHSILAEYGLPYA-FPEEVEQEADAIDR 252
Query: 500 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 559
E+ +E+ R D+R C FTIDP A D DDALSI +L +G +GVHIADVS++V+P T
Sbjct: 253 EIRDDEVKKRWDMRGICTFTIDPKDAKDFDDALSIRKLENGNWEIGVHIADVSHYVVPNT 312
Query: 560 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 619
LD EA R+TSVY++ R +PMLP +LS EV SL P D+ FS ++LN ++ +W
Sbjct: 313 LLDQEAYQRATSVYLVDRVVPMLPEVLSNEVCSLRPNEDKYTFSAVFELNDKAEIKKQWF 372
Query: 620 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 679
GRTVI S + +YE AQ+ I+ G+G D+ I +L +++K
Sbjct: 373 GRTVIHSDRRFTYEEAQERIE----------TGKG-----------DLADEILTLDKLAK 411
Query: 680 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 739
IL+++R GA+ + S+ F DE P +D N L EEFMLLAN+ +E I+
Sbjct: 412 ILREERIRKGAITFDRSEVRFNLDENNEPIGVYFKVSKDSNHLIEEFMLLANRKVSEFIS 471
Query: 740 ---RAFP--DSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 794
+ P + + R H P+ KL F + G +++ ++S + +S+ + + +K
Sbjct: 472 LNKKGSPTGKTFIYRVHDDPDPTKLEALRDFVATFGYKMNLANSQKVAESMNELLKSVKG 531
Query: 795 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 854
+++ A R M A Y GHY L F YTHFTSP+RRYPDL+ HR
Sbjct: 532 KGEE-NMIETLAMRSMSKAIYSTE-------PIGHYGLGFEYYTHFTSPIRRYPDLIAHR 583
Query: 855 TLNAALEAEK 864
L L+ K
Sbjct: 584 LLQHYLDQGK 593
>gi|260943097|ref|XP_002615847.1| hypothetical protein CLUG_04729 [Clavispora lusitaniae ATCC 42720]
gi|238851137|gb|EEQ40601.1| hypothetical protein CLUG_04729 [Clavispora lusitaniae ATCC 42720]
Length = 978
Score = 251 bits (642), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 229/758 (30%), Positives = 343/758 (45%), Gaps = 133/758 (17%)
Query: 147 DNPSHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLI 206
+N S A F ++S ++ G ++ + ++ +N LE + + +LI
Sbjct: 230 ENESFDKNAAEVAFPEYYSTSRTMAGVKNGTLYQGILNISTYNFLEGTVQTPAFKKPLLI 289
Query: 207 TGIAAQNRAVEGDFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSK 266
G NRA GD V+++ L K K +++IVE+S++ N
Sbjct: 290 VGTKNLNRAFNGDLVIVE-----LLPKDKWREPSTTIVEESSIGANDN------------ 332
Query: 267 VDVSYEYSNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQ 326
+E NQE I SD +V + +
Sbjct: 333 -------------------------AEEENQESI--------------ISDKERRVLAQE 353
Query: 327 QNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDA 386
A++ SA S +PT R+VSI RS W Y G
Sbjct: 354 ------AVKATSA--SEAHRLQPTARIVSITRRS--------------WRYYVG------ 385
Query: 387 KKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDE 446
+ SS+SV + + VVL+ L I+ + + + +V + +D
Sbjct: 386 QIAPSSVSVEEDN------GNASKTCFVVLMDKLLPKIRIKTRKAKDLLGQRIVVS-VDS 438
Query: 447 WNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVP--WEVPQ- 503
W S +P H + G E + A+L E+ + FS L CLP W VP+
Sbjct: 439 WPSYSKYPLGHFVRSLGEIESAEAETEALLLEHDVEYRPFSKAVLECLPKEGDNWVVPEN 498
Query: 504 -----EELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPG 558
E+L R DLR+ + +IDP D+DDAL E L +G VGVHIADV++FV P
Sbjct: 499 LDNGDEQLKKRVDLRHKLVCSIDPPNCVDIDDALHAEPLPNGNYEVGVHIADVTHFVKPN 558
Query: 559 TALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW 618
T LD E R TSVY++ ++I MLP+LL + SL P V+R +FS+ W+++ ++VD
Sbjct: 559 TPLDNEGASRGTSVYLVDKRIDMLPMLLGTNLCSLKPFVERFSFSVIWEVDEDANIVDVK 618
Query: 619 IGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVS 678
+++I+S SYE AQ ID +N + ++ S++ L ++S
Sbjct: 619 YMKSIIKSRQAFSYEQAQLRID------DAN-------------QQDELTNSMRILLKLS 659
Query: 679 KILKDKRFTDGALRLENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEV 737
K LK KR GAL L + + V + E P + + + N L EEFMLLAN + A
Sbjct: 660 KKLKQKRLDAGALNLASPEVKVHMDSETSDPGEVEIKKLLETNSLVEEFMLLANISVARK 719
Query: 738 IARAFPDSALLRRHPAP---NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 794
I A+P +A+LRRH AP N L E K+G+ + T SS SL++ E +D
Sbjct: 720 IFDAYPQTAMLRRHAAPPATNFEALNEM-LRVRKNGMSISTESSKALADSLDRC-EDPED 777
Query: 795 DYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVH 853
+Y F+ L+ +TR M A YF SG + D+ HY LA +YTHFTSP+RRY D+V H
Sbjct: 778 EY--FNTLVRIMSTRCMMAAEYFSSGSY-GYPDFRHYGLAVDIYTHFTSPIRRYCDVVAH 834
Query: 854 RTLNAALEAEKLYWKHR-----RMLPKNNHREGVRGRF 886
R L A+ E L HR ++ KN +R +F
Sbjct: 835 RQLAGAIGYENLDLSHRDKTKMELIVKNINRRHRNAQF 872
>gi|110636884|ref|YP_677091.1| exoribonuclease II [Cytophaga hutchinsonii ATCC 33406]
gi|110279565|gb|ABG57751.1| RNAse R [Cytophaga hutchinsonii ATCC 33406]
Length = 750
Score = 251 bits (642), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 168/532 (31%), Positives = 253/532 (47%), Gaps = 76/532 (14%)
Query: 346 TKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTP 405
TK G +V I+ER +R VG + V+ R + VPD + +
Sbjct: 144 TKSAEGEIVEIVER--KRTSFVGRIEVSA---------------RHAFVVPDGRKMHVDI 186
Query: 406 THPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEW-NEESPFPQAHVLHVFGR 464
PK E + E V I W + P V V G
Sbjct: 187 FIPK-------------------EHINGAKTGEKVLVDITAWPTRDEKSPTGKVTEVLGM 227
Query: 465 GGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPST 524
GE E +++AIL E + F + + + E + E+ R+D+R FTIDP
Sbjct: 228 AGENETEMHAILAEFGLPYE-FPNQVIKAAQDITAETSEAEIKKRRDMRGTTTFTIDPED 286
Query: 525 ATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPV 584
A D DDA+S + L +G +GVHIADVS++V PG LD EA R+TSVY++ R +PMLP
Sbjct: 287 AKDFDDAISFKYLDNGNWEIGVHIADVSHYVQPGDTLDKEAYRRATSVYLVDRCVPMLPE 346
Query: 585 LLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFD 644
LS E+ SL P D+L FS +++++ V+D W GRT+I S + SYE AQ++I
Sbjct: 347 RLSNELCSLRPNEDKLTFSAIFEIDADAKVLDEWFGRTIIHSTRRFSYEQAQEVI----- 401
Query: 645 VESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDE 704
+ + D+V+ + L ++K ++ +RF +GA+ E + F D
Sbjct: 402 ----------------ETQQGDLVKELTILNTLAKKMRAQRFKEGAISFETVEVKFQLDA 445
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVI-----ARAFPDSALLRRHPAPNMRKL 759
G P V R+D + L EEFMLLANK AE + + ++ + R H APN KL
Sbjct: 446 KGKPLAVVPKVRKDAHKLIEEFMLLANKRVAEFVFNLRKGKGTSNTMVYRTHDAPNPEKL 505
Query: 760 REFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSG 819
F + G +++ ++L + ++++ ++L + A R M A Y
Sbjct: 506 ASLATFAKRFGHKVELDDENAIAKNLNKLSDEVEGKPEQ-NVLQSLAIRTMSKAIYSIEP 564
Query: 820 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE----AEKLYW 867
D H+ LAF Y+HFTSP+RRYPD++ HR L L+ A+K Y+
Sbjct: 565 DM-------HFGLAFKHYSHFTSPIRRYPDVMAHRLLQHYLDGGKSADKEYY 609
>gi|168027129|ref|XP_001766083.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682726|gb|EDQ69142.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1050
Score = 251 bits (642), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 185/556 (33%), Positives = 264/556 (47%), Gaps = 78/556 (14%)
Query: 336 RLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSV 395
R+ A+ RPTGRVV II+R+ R+ + + GGS + +
Sbjct: 343 RVDAVDGKSAPSRPTGRVVGIIKRNWRQ-----YCGSIEPMKMPGGSGGTVQ---ALFVS 394
Query: 396 PDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQ 455
DR + PK+ + + L + I KR + +D W S +P
Sbjct: 395 ADR----------RIPKIRIQTRQLANLIDKR------------IMVSVDSWEPTSRYPN 432
Query: 456 AHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLS--RKDLR 513
H + G G+ + + +L EN I FS L+CLP +PW ++E L+ R+DLR
Sbjct: 433 GHYVRTIGEIGDRATESDVLLLENDINSRPFSEAVLACLPPLPWSFSEQEHLNNQRQDLR 492
Query: 514 NFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVY 573
+ +F++DP D+DDAL L D I ADV+ FVLP LD EA R TSVY
Sbjct: 493 HIRVFSVDPLGCRDIDDALHCTLLPDDI-------ADVTNFVLPNLPLDEEASQRGTSVY 545
Query: 574 MLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYE 633
+++R+I MLP L+E++ SL V+RLAFS W +NS ++ ++VI+SC +SY
Sbjct: 546 LVERRIDMLPKPLTEDICSLRADVERLAFSCIWVMNSEAEIESVRFTKSVIKSCAAMSYL 605
Query: 634 HAQDIIDGKFDVESSNTLGEGWPQLYGQF--EWSDVVRSIKSLYEVSKILKDKRFTDGAL 691
AQ +D +F W +F E S S + + I++ +R GAL
Sbjct: 606 EAQTRMDDRF-----------W-----RFSEEISITSTSRLTFLLLQHIMRLRRIERGAL 649
Query: 692 RLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRR 750
L + + F D E P D + + N + EEFML AN + A I FP +LLRR
Sbjct: 650 TLASPEVKFEIDTETHDPLDVGMYQVREANQMVEEFMLAANMSVAAKILEHFPSCSLLRR 709
Query: 751 HPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPM 810
HP P + + G+ LD SSS +L+ A + DD ++ ATR M
Sbjct: 710 HPEPTPQMFEPLLRTAAAVGVTLDISSSKALADALDHA---VGDDPYFNKLIRIMATRCM 766
Query: 811 QLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYP----------------DLVVHR 854
A YFCSG+ ++ HY LA P+YTHFTSP+RRY D++VHR
Sbjct: 767 TQAVYFCSGELS-YPEYLHYGLAAPLYTHFTSPIRRYAGTLALHFILFFRKLIGDVIVHR 825
Query: 855 TLNAALEAEKLYWKHR 870
L AAL L K R
Sbjct: 826 LLAAALGLNTLPEKLR 841
Score = 47.4 bits (111), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
++ H M + L G + RVN +N EAY E V +++LI G NRA +G
Sbjct: 236 VYGEHKVMSEIAAGLHNGRFHQGKLRVNRYNPFEAYVGSESVGSEILILGRQDMNRAFDG 295
Query: 219 DFVLIKVDRLSLWA 232
D V +++ S WA
Sbjct: 296 DVVAVELLPQSSWA 309
>gi|312070717|ref|XP_003138275.1| hypothetical protein LOAG_02690 [Loa loa]
Length = 956
Score = 251 bits (642), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 155/440 (35%), Positives = 230/440 (52%), Gaps = 38/440 (8%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 499
+ ID W +S +P H + G G+ E + +L E+ + FS +CLP +PW
Sbjct: 404 IIVAIDNWPRDSRYPVGHYVRSIGVAGDRETENEVLLLEHDVPHGPFSDAVYACLPRIPW 463
Query: 500 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVH-----------I 548
++P E RKDLR+ I ++DP TD+DDA +++ V +H I
Sbjct: 464 QMPDEN--HRKDLRSLTICSVDPPGCTDIDDAFHCIQIASDRYEVIIHHYFLILYNFILI 521
Query: 549 ADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDL 608
++ ++ TA+D EA R T+VY+ ++I MLP LLS ++ SL VDRLAFS+ W L
Sbjct: 522 SEYVIIIISDTAMDAEAAHRGTTVYLCDKRIDMLPELLSSDLCSLRENVDRLAFSVIWTL 581
Query: 609 NSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVV 668
S D++D +++IRS L+YE AQ+ ID + S T+G
Sbjct: 582 TSDADIIDTKFHKSLIRSSGALTYEQAQNRIDDP-SLSDSVTVG---------------- 624
Query: 669 RSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFM 727
+++L E+SK LK KR +GAL L +S+ F D E P N + EEFM
Sbjct: 625 --LRTLLELSKKLKAKRHANGALTLASSEIRFSIDSETKDPISVQEKKMLATNSMVEEFM 682
Query: 728 LLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQ 787
LLAN + AE I FPD ALLRRHP P + G +++ S +SL++
Sbjct: 683 LLANISVAERITSDFPDCALLRRHPIPPEENYKPVIDMAKAKGFKMNVESGKALSESLDK 742
Query: 788 AREKLKDDYVLFDILINY-ATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRR 846
A + ++ V+ + L TR M A YF SG + + H+ LA P+YTHFTSP+RR
Sbjct: 743 A---VDENNVMLNTLFRMLTTRCMTQAVYFSSGSLPTE-QYVHFGLAAPIYTHFTSPIRR 798
Query: 847 YPDLVVHRTLNAALEAEKLY 866
Y D++VHR L+A++ A+ +
Sbjct: 799 YADIMVHRLLSASIYADSTF 818
>gi|156101367|ref|XP_001616377.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148805251|gb|EDL46650.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 1000
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 159/441 (36%), Positives = 229/441 (51%), Gaps = 38/441 (8%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 499
V ID+W+ S +P L V G ++E + I E I FS + CLP W
Sbjct: 459 VIVVIDKWDYNSKYPLGRCLSVLGICDDIETETKLIYNEYNISTKEFSESAYKCLPPNDW 518
Query: 500 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDG--ISRVGVHIADVSYFVLP 557
+P+EE R+D RN F+IDP D+DDALS+ R+ +G + VGVHIADVSYFV
Sbjct: 519 AIPEEEYAKRRDFRNVITFSIDPPGCEDIDDALSV-RMMEGQNVIEVGVHIADVSYFVKQ 577
Query: 558 GTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR 617
+ALD+EA R T+VY++ +++ MLP LL+ ++ SL G DRL +S + ++ VVD
Sbjct: 578 NSALDLEASKRCTTVYLINQRVEMLPKLLTTDLCSLVEGQDRLTYSCIFTFDANYQVVDI 637
Query: 618 WIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEV 677
+ + +IRS SYE AQ +ID D E S+ E +++ L +
Sbjct: 638 NVCKCIIRSNKSFSYEQAQKLID---DGEDSSPTAE----------------ALRLLNNI 678
Query: 678 SKILKDKRFTDGALRLE-NSKPVFLFDEYG-------TPYDSVLSGREDLNFLFEEFMLL 729
+K LK+K +GAL L NS+ +F F+ PY S D N L E FMLL
Sbjct: 679 AKHLKEKWLNEGALELRGNSEVLFEFESNDFSKTKNLKPYVSY-----DTNKLIEAFMLL 733
Query: 730 ANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQ-LDTSSSGQFHQSLEQA 788
AN++ A +I + F +++LRRHP P L+E + + +S + S+
Sbjct: 734 ANRSVARIIYQGFKAASVLRRHPPPKNEHLKELNDYLESINIHDFKYGTSKELSHSINNI 793
Query: 789 REKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYP 848
LK+D VL +IL T+ M A + ++ HY LA +YT FTSP+RRY
Sbjct: 794 N--LKEDKVLCNILKILITKCMNEAVFISGYSVHNNEMLRHYGLAADIYTFFTSPIRRYA 851
Query: 849 DLVVHRTLNAALEAEKLYWKH 869
D++VHR LN E L K+
Sbjct: 852 DIMVHRVLNHIYGVENLDSKY 872
>gi|195336253|ref|XP_002034756.1| GM14317 [Drosophila sechellia]
gi|194127849|gb|EDW49892.1| GM14317 [Drosophila sechellia]
Length = 1025
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 152/413 (36%), Positives = 221/413 (53%), Gaps = 35/413 (8%)
Query: 456 AHVLHVFGRGGEVEPQINAILYENAICCSGFSP-----ESLSCLPCVPWEVPQEELLSRK 510
A ++ GR G ++ ++ AIL+ N + P + P P + Q++L RK
Sbjct: 507 ADLIQPVGRVGNLDDELKAILFHNGL--RDIKPFEQRFNDIFSQPSPP--ISQDDLHQRK 562
Query: 511 DLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRST 570
DLR CIFTIDP TA DLDDA+SIE+L D +GVHI+DVS+F++ LD + RST
Sbjct: 563 DLRKMCIFTIDPMTARDLDDAVSIEKLGDNEYEIGVHISDVSHFLIEDNELDNIVKERST 622
Query: 571 SVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW--IGRTVIRSCC 628
S+Y+ I MLP L SL PG D+ AFS+FW +N G ++ + RTVI SC
Sbjct: 623 SIYLANEVIHMLPQSLCMRC-SLLPGEDKFAFSVFWRMNGEGVMLQKEPEFCRTVINSCS 681
Query: 629 KLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTD 688
+ +YEHAQ IID + + N +P + F D+ + L++++ ++ R +
Sbjct: 682 QFAYEHAQKIIDNPNERFTEN----DFPTILNGFNPDDIRNRVLWLHDIASSIRKTRLDN 737
Query: 689 GALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALL 748
GAL + N+K F+ D +SG E L+F + A I +FPD A+L
Sbjct: 738 GALTINNAKLRFVLDP--------ISG-EPLSF----------EAVARFIHESFPDIAVL 778
Query: 749 RRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATR 808
R HP P + L+ G +LD SSS +S+ + + + + L +
Sbjct: 779 RNHPPPLTKSLKALREKFLALGFELDYSSSKALQESMVRLCNEAPNPVAMNACLSQLLMK 838
Query: 809 PMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 861
PM A+YFCS + D HYAL+ P+YTHFTSP+RRYPD++VHR L A L+
Sbjct: 839 PMARATYFCSEGKSEPADLWHYALSIPIYTHFTSPIRRYPDIMVHRLLAAGLK 891
>gi|373956721|ref|ZP_09616681.1| ribonuclease R [Mucilaginibacter paludis DSM 18603]
gi|373893321|gb|EHQ29218.1| ribonuclease R [Mucilaginibacter paludis DSM 18603]
Length = 711
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 149/431 (34%), Positives = 225/431 (52%), Gaps = 34/431 (7%)
Query: 438 ELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV 497
E A I +W E+ P + +V G+ GE + ++NAIL E S F E +
Sbjct: 186 EKALAEITDWPPEAKNPVGRIKNVLGKQGENDTEMNAILAEYGFPLS-FPAEVEHDAEAI 244
Query: 498 PWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLP 557
+ EE+ RKD R+ FTIDP A D DDALS + L +G +G+HIADVS++++P
Sbjct: 245 SDIITPEEIAKRKDFRDVLTFTIDPFDAKDFDDALSFKYLDNGNYEIGIHIADVSHYIIP 304
Query: 558 GTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR 617
+ LD EA R TSVY++ R IPMLP LS + SL P D+L FS ++L+ V++
Sbjct: 305 DSPLDKEAFERGTSVYLVDRVIPMLPERLSNGLCSLRPNEDKLCFSAVFELDQNAFVINE 364
Query: 618 WIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEV 677
W G+T+I S + +YE Q+II+ G+G + ++ I L ++
Sbjct: 365 WFGKTIIHSNRRFTYEEVQEIIEN----------GDG-----------EYIKEITILNQL 403
Query: 678 SKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEV 737
+ L+D++F +GA+ E ++ F D G P + R+D + L E++MLLAN+ AE
Sbjct: 404 AYQLRDRKFKNGAISFETTEVKFKLDASGKPIGVYVKERKDAHKLIEDYMLLANRKVAEF 463
Query: 738 IARAFPD----SALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLK 793
+A+ + + R H +P L F F ++ G +++T S + +SL E ++
Sbjct: 464 VAKKAKGKNKYTFVYRSHDSPKQETLAGFAQFAARFGYKINTKSDKEIARSLNHLMEDVE 523
Query: 794 DDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVH 853
++L A R M A Y HY LAF YTHFTSP+RRYPD++VH
Sbjct: 524 GKKEQ-NVLTQLAIRSMAKAIYTTK-------KTSHYGLAFDYYTHFTSPIRRYPDVMVH 575
Query: 854 RTLNAALEAEK 864
R L L+ K
Sbjct: 576 RLLQHYLDGGK 586
>gi|86134792|ref|ZP_01053374.1| ribonuclease R [Polaribacter sp. MED152]
gi|85821655|gb|EAQ42802.1| ribonuclease R [Polaribacter sp. MED152]
Length = 739
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 153/431 (35%), Positives = 227/431 (52%), Gaps = 18/431 (4%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 499
V A I +W E S P + V G+ G+ ++++IL E + F PE +P
Sbjct: 192 VQATISDWPENSKNPFGKITTVLGKPGDHNTEMHSILLEYDLPYE-FEPEVEKEAQELPI 250
Query: 500 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 559
E+ +E+ R+D+RN FTIDP A D DDALS +L +G +G+HIADVS+++ P T
Sbjct: 251 EITDKEIAKRRDMRNDLTFTIDPKDAKDFDDALSFTKLENGNYEIGIHIADVSHYLQPKT 310
Query: 560 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 619
LD EA R+TSVY++ R +PMLP +LS V SL P ++L FS +++N + +W
Sbjct: 311 ILDDEAYDRATSVYLVDRVVPMLPEMLSNGVCSLRPNEEKLTFSAVFEINEKAQIKKQWF 370
Query: 620 GRTVIRSCCKLSYEHAQDIIDG---KFDVESSNTLGEGWPQLYGQFEW-SDVVRSIKSLY 675
GRTV S + +YE AQ II+ DV+ T+ E +E ++VV + L
Sbjct: 371 GRTVTYSDQRFAYEEAQYIIENCKLSDDVQPF-TMPENVSITDSAYEVKAEVVEATLQLD 429
Query: 676 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 735
+++KIL+ KR GA+ + + F DE P +D N L EEFMLLAN+ A
Sbjct: 430 KLAKILRKKRMKQGAISFDRVEVKFNLDEEANPVGVFFKSSKDANKLIEEFMLLANRKVA 489
Query: 736 EVI----ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREK 791
E I + + + R H P++ KL + SK G +++T + +SL Q
Sbjct: 490 EYIGSKQGKPSNKTFIYRVHDEPDVEKLASLQNIISKFGYKINTETKESTSESLNQLLND 549
Query: 792 LKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 851
++ +++ A R M A Y + GHY LAF Y+HFTSP+RRYPD++
Sbjct: 550 VQGK-AESNMIETLAIRSMSKAVYTTQ-------NIGHYGLAFDYYSHFTSPIRRYPDVM 601
Query: 852 VHRTLNAALEA 862
HR L L+
Sbjct: 602 THRLLQLYLDG 612
>gi|409074552|gb|EKM74947.1| hypothetical protein AGABI1DRAFT_80468 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 995
Score = 251 bits (641), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 184/535 (34%), Positives = 260/535 (48%), Gaps = 69/535 (12%)
Query: 347 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNY--KGGSRKDAKKNRSSLSVPDREYIQLT 404
++PTGRVV II+R+ W Y S N +SL+ ++ + T
Sbjct: 374 RQPTGRVVGIIKRN--------------WRAYVCHIDSTSLTSLNATSLA---QQTVFAT 416
Query: 405 PTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGR 464
P P++ + + P I ++ + ID W+ S +P+ H + G+
Sbjct: 417 PVSRLLPRIRLRTRQAPMLIGQK------------ILVTIDRWDINSRYPEGHFVRSLGK 464
Query: 465 GGEVEPQINAILYENAICCSGFSPESLSCLP--CVPWEVPQE-----ELLSRKDLRNFCI 517
E + +++ E + F L CLP W VP + E +R+DLR I
Sbjct: 465 VESKEAEQESLMLEFDVRYRPFGKAILDCLPPEGEQWVVPLKDDVNPEWKNREDLRQLLI 524
Query: 518 FTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 577
+IDP D+DDAL L +G GVHIADVS+FV T +D EA R T+VY++ R
Sbjct: 525 CSIDPPGCQDIDDALHARPLPNGNIEAGVHIADVSHFVHADTPIDNEAADRGTTVYLVDR 584
Query: 578 KIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQD 637
+I MLP LL + SL P V+RLAFS W+L ++V+ ++VI S +YE AQ
Sbjct: 585 RIDMLPSLLGTNLCSLRPFVERLAFSAIWELTPEAEIVNVRFTKSVIASKAAFTYEEAQI 644
Query: 638 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 697
D P + D+ SI+ L ++K LK+KR GAL L + +
Sbjct: 645 RKDD--------------PN-----QQDDLSHSIRLLNTLAKKLKEKRMKAGALNLASPE 685
Query: 698 PVFLFD--EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH---P 752
D E P D + N L EEFMLLAN + AE I FP +A+LRRH P
Sbjct: 686 VKIYLDSSESSDPIDVEQKELRETNSLVEEFMLLANISVAEKIQETFPQTAVLRRHLPPP 745
Query: 753 APNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQ 811
N KL++ + G++LD SSS SL+ + + F+ L+ ATR M
Sbjct: 746 KANFEKLQDI--LMKRRGIKLDVSSSRALADSLDTCVDPQEPS---FNTLVRIMATRCML 800
Query: 812 LASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
A YFCSG DT +GHY LA +YTHFTSP+RRY D++ HR L AA+ L+
Sbjct: 801 SAEYFCSGSVARDT-FGHYGLASAIYTHFTSPIRRYADVLAHRQLAAAIGNSPLH 854
>gi|189464648|ref|ZP_03013433.1| hypothetical protein BACINT_00991 [Bacteroides intestinalis DSM
17393]
gi|189436922|gb|EDV05907.1| ribonuclease R [Bacteroides intestinalis DSM 17393]
Length = 714
Score = 251 bits (640), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 155/433 (35%), Positives = 226/433 (52%), Gaps = 53/433 (12%)
Query: 442 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWE 500
++ EW +++ P V+ + G+ G+ +++AIL E + P S+ +P E
Sbjct: 193 VKVVEWPDKAKNPIGQVIDILGKAGDNTTEMHAILAEFGLPY--VYPSSVEKAADRIPAE 250
Query: 501 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 560
+ EE+ R+D RN FTIDP A D DDALSI ++ DG+ VGVHIADV+++V G+
Sbjct: 251 ISAEEIAKREDFRNVTTFTIDPKDAKDFDDALSIRKIKDGLWEVGVHIADVTHYVTEGSI 310
Query: 561 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIG 620
+D EA+ R+TSVY++ R IPMLP L + SL P ++LA+S+ +++N GDV D +
Sbjct: 311 IDKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPDEEKLAYSVIFEINEKGDVKDSRVV 370
Query: 621 RTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKI 680
TVI+S + +YE AQ +I+ K EG D I L ++K
Sbjct: 371 HTVIKSDRRFTYEEAQQVIETK----------EG-----------DFKEEILMLDTIAKA 409
Query: 681 LKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVI-- 738
L+ KRF GA+ + + F D G P +D N L EEFMLLAN+T AE I
Sbjct: 410 LRQKRFVSGAINFDRYEVKFEIDAKGKPISVYFKVSQDANKLVEEFMLLANRTVAEKIGR 469
Query: 739 ------ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQ 787
A+ FP R H P+ KL F ++ G +L TS S + L+
Sbjct: 470 VPKNKKAKVFP----YRIHDLPDPEKLDNLAQFIARFGYKLRTSGTKTDVSKSINHLLDD 525
Query: 788 AREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRY 847
+ K ++ +++ + R MQ A Y + GHY LAF YTHFTSP+RR+
Sbjct: 526 IQGKKEE-----NLIETVSIRAMQKARYSTH-------NIGHYGLAFDYYTHFTSPIRRF 573
Query: 848 PDLVVHRTLNAAL 860
PD++VHR L L
Sbjct: 574 PDMMVHRLLTKYL 586
>gi|313886681|ref|ZP_07820391.1| ribonuclease R [Porphyromonas asaccharolytica PR426713P-I]
gi|312923843|gb|EFR34642.1| ribonuclease R [Porphyromonas asaccharolytica PR426713P-I]
Length = 725
Score = 251 bits (640), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 162/432 (37%), Positives = 228/432 (52%), Gaps = 54/432 (12%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 499
V I EW P VL V G+ G+ + ++ AIL E I G+ ++ +
Sbjct: 202 VEVAITEWPSSDKIPTGRVLKVLGKAGDNDTEMRAILTEYNIDY-GYPQAAIDEAEQLSG 260
Query: 500 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 559
E+ QE+L R+D R TIDP+ A D DDALS L DG VGVHIADVSYFV G+
Sbjct: 261 EITQEQLAQREDFREVPTLTIDPADAKDFDDALSYRDLGDGRHEVGVHIADVSYFVTEGS 320
Query: 560 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 619
+D EA R TSVY++ R IPMLP L + SL P D+ A+S L++A V I
Sbjct: 321 KIDEEAYARGTSVYLVDRTIPMLPEALCNNLCSLRPNEDKYAYSCILTLDNAAHVQQYRI 380
Query: 620 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 679
RTVIRS +++YE AQD+I+G+ D + + I+ L+E+S+
Sbjct: 381 CRTVIRSDQRMTYEEAQDVIEGRSDTQQA---------------------IIQPLFELSQ 419
Query: 680 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDL-----NFLFEEFMLLANKTA 734
L+ +RF +GA++ ++ + F+ D G P +G E++ + L EEFMLLAN+T
Sbjct: 420 QLRKRRFDEGAIKFQSQEVRFVLDPKGRP-----TGVEEVIDNESHHLIEEFMLLANRTV 474
Query: 735 AEVIA--RAFPDSA---LLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQS 784
AE I RA A + R H P+ KL +F K G +++ S S F++
Sbjct: 475 AEDIGLVRAKGKKAKNFVYRVHAQPSEEKLMALASFAGKFGYKVNLSGENRQVSRSFNKL 534
Query: 785 LEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPL 844
L+ + K ++ ++ A R M A Y S D + GHY L+F YTHFTSP+
Sbjct: 535 LDSVQGKREE-----SLIETLAIRSMTRAEY--SPD-----NIGHYGLSFAYYTHFTSPI 582
Query: 845 RRYPDLVVHRTL 856
RRYPDL+VHR L
Sbjct: 583 RRYPDLMVHRLL 594
>gi|258647303|ref|ZP_05734772.1| ribonuclease R [Prevotella tannerae ATCC 51259]
gi|260852821|gb|EEX72690.1| ribonuclease R [Prevotella tannerae ATCC 51259]
Length = 761
Score = 251 bits (640), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 195/601 (32%), Positives = 285/601 (47%), Gaps = 81/601 (13%)
Query: 282 KGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMI 341
KG +H +A Q ++E NG++ D ++K + + ++A++ +
Sbjct: 67 KGHYH------KAQRQHIMEGVFKRKRNGYNSFIPDGSDKPILVSERNALHALDGDRVQV 120
Query: 342 SSYPTKRPTGR---VVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDR 398
+ +R R V++I+ERS D VG L V +KN + L P R
Sbjct: 121 AMMARRRGHEREAEVIAILERS--NDTFVGRLKV--------------EKNYAFLITPSR 164
Query: 399 EYIQLTPTHPKYPKMVVLVKDL--PDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQA 456
VL D+ P K + GD V +I EW E+ P
Sbjct: 165 ----------------VLANDIFIPTQNLKGGKTGDK------VVVKIVEWPMEAKSPIG 202
Query: 457 HVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFC 516
V+ + G+ GE ++NAIL E + + + +P V EE+ R+D+R+
Sbjct: 203 KVVDILGQEGENNAEMNAILAEFNLPYT-YPNRVTEAADKIPDGVTAEEIAQREDMRDVL 261
Query: 517 IFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQ 576
FTIDP A D DDALSI L+DG VGVHIADV+ +V G +D EA R+TS+Y++
Sbjct: 262 TFTIDPRDAKDFDDALSIRTLADGAWEVGVHIADVTAYVHEGDIIDREALKRATSIYLVD 321
Query: 577 RKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQ 636
R IPMLP LS ++ SL D+LA+S+ + +N AG+V+D + TVIRS + YE Q
Sbjct: 322 RTIPMLPERLSNQLCSLRQDEDKLAYSVIFKMNDAGEVLDWHLAHTVIRSDRRFVYEEVQ 381
Query: 637 DIID--GKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLE 694
I++ G+ E T GE + G + + +L ++K L+ KRF GA+ +
Sbjct: 382 YILEQNGEASAEDLATPGEHPKVVKGTTPVGEYAAQLITLNRLAKQLRSKRFKHGAIGFD 441
Query: 695 NSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVI--------ARAFPDSA 746
+ F D+ G P + + +D N L EEFMLLAN+T AE I A+ FP
Sbjct: 442 RPEIRFEIDDKGHPVSTFIRLAKDANKLVEEFMLLANRTVAEHIGRVARGKKAKVFP--- 498
Query: 747 LLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQ-----FHQSLEQAREKLKDDYVLFDI 801
R H P+ KL F +K G ++ T S + ++ LE + K + V
Sbjct: 499 -YRIHDVPDPEKLITLSGFIAKFGYKIRTEGSKKDVSKSLNRLLEDVKGKKEQGMVEMVT 557
Query: 802 LINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 861
L R M A Y + GHY L F YTHFTSP+RRYPD++VHR L E
Sbjct: 558 L-----RAMAKARYSIE-------NIGHYGLMFDYYTHFTSPIRRYPDMMVHRLLTRYAE 605
Query: 862 A 862
Sbjct: 606 G 606
>gi|332300072|ref|YP_004441993.1| ribonuclease R [Porphyromonas asaccharolytica DSM 20707]
gi|332177135|gb|AEE12825.1| ribonuclease R [Porphyromonas asaccharolytica DSM 20707]
Length = 725
Score = 251 bits (640), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 162/432 (37%), Positives = 228/432 (52%), Gaps = 54/432 (12%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 499
V I EW P VL V G+ G+ + ++ AIL E I G+ ++ +
Sbjct: 202 VEVAITEWPSSDKIPTGRVLKVLGKAGDNDTEMRAILTEYNIDY-GYPQAAIDEAEQLSG 260
Query: 500 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 559
E+ QE+L R+D R TIDP+ A D DDALS L DG VGVHIADVSYFV G+
Sbjct: 261 EITQEQLAQREDFREVPTLTIDPADAKDFDDALSYRDLGDGRHEVGVHIADVSYFVTEGS 320
Query: 560 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 619
+D EA R TSVY++ R IPMLP L + SL P D+ A+S L++A V I
Sbjct: 321 KIDEEAYARGTSVYLVDRTIPMLPEALCNNLCSLRPNEDKYAYSCILTLDNAAHVQQYRI 380
Query: 620 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 679
RTVIRS +++YE AQD+I+G+ D + + I+ L+E+S+
Sbjct: 381 CRTVIRSDQRMTYEEAQDVIEGRSDTQQA---------------------IIQPLFELSQ 419
Query: 680 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDL-----NFLFEEFMLLANKTA 734
L+ +RF +GA++ ++ + F+ D G P +G E++ + L EEFMLLAN+T
Sbjct: 420 QLRKRRFDEGAIKFQSQEVRFVLDPKGRP-----TGVEEVIDNESHHLIEEFMLLANRTV 474
Query: 735 AEVIA--RAFPDSA---LLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQS 784
AE I RA A + R H P+ KL +F K G +++ S S F++
Sbjct: 475 AEDIGLVRAKGKKAKNFVYRVHAQPSEEKLMALASFAGKFGYKVNLSGENRQVSRSFNKL 534
Query: 785 LEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPL 844
L+ + K ++ ++ A R M A Y S D + GHY L+F YTHFTSP+
Sbjct: 535 LDSVQGKREE-----SLIETLAIRSMTRAEY--SPD-----NIGHYGLSFAYYTHFTSPI 582
Query: 845 RRYPDLVVHRTL 856
RRYPDL+VHR L
Sbjct: 583 RRYPDLMVHRLL 594
>gi|392575716|gb|EIW68849.1| hypothetical protein TREMEDRAFT_63316 [Tremella mesenterica DSM
1558]
Length = 1021
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 164/462 (35%), Positives = 239/462 (51%), Gaps = 36/462 (7%)
Query: 416 LVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAI 475
L + LP I+ R + + ++ +++ ID W+ S +P H + G+ E + ++
Sbjct: 433 LSRTLP-RIRLRTRQAPSLLDQKILVT-IDSWSINSRYPDGHFVRSLGKVESKEAEQESL 490
Query: 476 LYENAICCSGFSPESLSCLPCV--PWEVPQEE-----LLSRKDLRNFCIFTIDPSTATDL 528
L E + F L CLP W+VP +E R+DLR+ + +IDP D+
Sbjct: 491 LLEYEVPYRPFGKAILDCLPLEGEDWKVPSKEEGDVIWRDREDLRDLIVCSIDPPACQDI 550
Query: 529 DDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSE 588
DDAL L +G GVHIADVS+FVLP +D EA R T+VY++ ++I MLP LL
Sbjct: 551 DDALHARELPNGNIEAGVHIADVSHFVLPDNPMDSEAAARGTTVYLVDKRIDMLPALLGT 610
Query: 589 EVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESS 648
+ SL P V+RLAFS+ W+L D+V+ ++VI S +YE AQ+ D D+ +
Sbjct: 611 NLCSLRPFVERLAFSVIWELTPEADIVNARFTKSVISSKEAFTYEAAQNRKD---DLSLN 667
Query: 649 NTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD--EYG 706
+ L +SI+ L ++ LK KR GAL L + + D E
Sbjct: 668 DPL----------------TQSIRLLNSLAIKLKSKRMKAGALSLSSPELKIHLDSSESA 711
Query: 707 TPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFC 766
P D + + N L EEFMLLAN + A I FP +A+LRRH P +
Sbjct: 712 EPIDVEQKHQRETNSLVEEFMLLANISVASKIQETFPGTAVLRRHSPPPKTNFEALQDVL 771
Query: 767 SKH-GLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDD 824
+K + LD SSSG +SL+ + + + F+ L+ ATR M A YFCSG +
Sbjct: 772 TKRKNMGLDVSSSGALARSLDACVDPNEPE---FNTLVRIMATRCMLAAEYFCSGSVTKE 828
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
+ +GHY LA +YTHFTSP+RRY D++ HR L AA+ L+
Sbjct: 829 S-YGHYGLASKIYTHFTSPIRRYADVLAHRQLAAAIGYSPLH 869
Score = 42.7 bits (99), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%)
Query: 158 KIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVE 217
KI+ + + + ++ G + + NA+N LE + G+ VL+ G NR+V+
Sbjct: 263 KIYDDYLPQDVLVAGVKTGRYHQGHFSANAYNYLEGTVNVPGLDKPVLLVGRENMNRSVQ 322
Query: 218 GDFVLIKVDRLSLW 231
GD V+I++ S W
Sbjct: 323 GDVVVIEIFPKSQW 336
>gi|354604032|ref|ZP_09022025.1| ribonuclease R [Alistipes indistinctus YIT 12060]
gi|353348464|gb|EHB92736.1| ribonuclease R [Alistipes indistinctus YIT 12060]
Length = 737
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 166/527 (31%), Positives = 258/527 (48%), Gaps = 81/527 (15%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
P G V+ I+E S ++ VG L ++ F + + D++K + + +P R+
Sbjct: 141 PEGEVIEILEHSDKK--YVGVLELSDSFAF---VKVDSRKFPTDVFIPLRD--------- 186
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+K D K V R+ EW + P ++ V G G+
Sbjct: 187 --------LKGAKDGQK--------------VLVRVTEWPDTMKNPAGEIVDVLGTPGDN 224
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDL 528
+++AIL E + + + E +P E+ +E+ +R+D R TIDP+ A D
Sbjct: 225 NTEMHAILAEYDLPYT-YPKEVEQEADKIPAELSADEIAARRDFRGITTLTIDPADAKDF 283
Query: 529 DDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSE 588
DDALS+ RL +G VGVHIADV+Y+V PG +D EA+ R+TSVY++ R IPMLP LS
Sbjct: 284 DDALSMRRLPNGNIEVGVHIADVTYYVHPGDIIDAEAENRATSVYLVDRTIPMLPERLSN 343
Query: 589 EVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESS 648
+ SL P ++ FS ++LN +V + W GRTVI S + +Y+ AQ +I+
Sbjct: 344 GLCSLRPNEEKFCFSAVFELNEEAEVQNEWFGRTVILSDRRFTYDEAQQVIES------- 396
Query: 649 NTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTP 708
GQ + SD + ++ +L ++ L+ RF +G++ E + F DE G P
Sbjct: 397 -----------GQGDLSDEITALNAL---ARKLRAARFRNGSISFEREEAKFDLDENGKP 442
Query: 709 YDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPD------SALLRRHPAPNMRKLREF 762
++ N L EEFMLLAN+ AE + R + + R H PN KL +
Sbjct: 443 LRVYFKEMKEANQLIEEFMLLANRKVAEFVGRKRQGVQNSERTFVYRVHDKPNSDKLAQL 502
Query: 763 EAFCSKHGLQLDTSSSGQ-----FHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFC 817
+F + G Q+ + + G+ ++ + K ++ +++ A R M A+Y
Sbjct: 503 RSFVMRFGYQMKSDAVGKALAKDINKLMTNVHGKQEE-----NLISTLAIRTMAKATYTT 557
Query: 818 SGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
T+ GHY LAF YTHFTSP+RRYPD++VHR L L K
Sbjct: 558 -------TNIGHYGLAFDYYTHFTSPIRRYPDMMVHRLLAHYLAGGK 597
>gi|384097159|ref|ZP_09998280.1| ribonuclease R [Imtechella halotolerans K1]
gi|383837127|gb|EID76527.1| ribonuclease R [Imtechella halotolerans K1]
Length = 736
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 156/430 (36%), Positives = 230/430 (53%), Gaps = 19/430 (4%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 499
V I++W E++ P + V G+ G+ + +I+AIL E + S F E +
Sbjct: 190 VIVSINDWPEKADSPYGTITQVLGKPGDHDTEIHAILAEYGLPYS-FPLEVEHYANQLDT 248
Query: 500 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 559
+ ++E+ R+D+R+ FTIDP A D DDALS RL +G +G+HIADVS++V PGT
Sbjct: 249 SITKDEISRRRDMRDVLTFTIDPRDAKDFDDALSFRRLENGNFEIGIHIADVSHYVTPGT 308
Query: 560 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 619
LD EA R+TSVY++ R +PMLP +LS SL P ++ FS ++LN + ++V++W
Sbjct: 309 LLDDEAYNRATSVYLVDRVVPMLPEILSNNACSLRPNEEKYTFSAVFELNGSAELVNKWF 368
Query: 620 GRTVIRSCCKLSYEHAQDIID----GKFDVESSNTLGEGWPQLYGQFEWS-DVVRSIKSL 674
G+TV S + +YE AQ II+ K SS + E + S ++V ++ ++
Sbjct: 369 GKTVTYSDQRFAYEEAQAIIEHYTLNKQSDYSSFLMPENIAITDTSYTVSKEIVEAVMTM 428
Query: 675 YEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTA 734
++K L+ KR GA+ + + F DE P +D N L EEFMLLAN+
Sbjct: 429 DVLAKKLRSKRMQSGAISFDKVEVKFRLDENSNPIGVYFKEAKDANKLIEEFMLLANRKV 488
Query: 735 AEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKL-- 792
AE IA+ + + R H P+ KL + + + G L+ S SL ++
Sbjct: 489 AEFIAKQ-EKTFVYRVHDEPDEEKLMQLQGIIGRFGYSLNMRSKQTITSSLNSLLTEVQG 547
Query: 793 KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 852
K + L D L A R M A Y S D + GHY LAF YTHFTSP+RRYPD++V
Sbjct: 548 KKEQNLVDTL---AIRSMSKAIY--STD-----NIGHYGLAFDYYTHFTSPIRRYPDVMV 597
Query: 853 HRTLNAALEA 862
HR L L+
Sbjct: 598 HRLLQQYLDG 607
>gi|423230707|ref|ZP_17217111.1| ribonuclease R [Bacteroides dorei CL02T00C15]
gi|423244418|ref|ZP_17225493.1| ribonuclease R [Bacteroides dorei CL02T12C06]
gi|392630357|gb|EIY24350.1| ribonuclease R [Bacteroides dorei CL02T00C15]
gi|392641992|gb|EIY35764.1| ribonuclease R [Bacteroides dorei CL02T12C06]
Length = 715
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 177/564 (31%), Positives = 272/564 (48%), Gaps = 85/564 (15%)
Query: 309 NGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVG 368
N P T ++ MN + A+ + + P G V+ I+ER+ D VG
Sbjct: 96 NSFIPDDGGETIFIAERNSAHAMNNDKVKIALFAKRKNRNPEGEVIEILERA--NDTFVG 153
Query: 369 FLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDL--PDSIKK 426
L V +++ + +NR+ L D+ P K
Sbjct: 154 TLKVEKFYAFL------LTENRT------------------------LANDIFIPKDKLK 183
Query: 427 RLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGF 486
+ GD + +I EW EE+ P V+ + G+ GE +++AIL E +
Sbjct: 184 GGKNGDKAV------VKIVEWPEEAKNPIGQVIDILGKAGENTTEMHAILAEFGLPY--V 235
Query: 487 SPESL-SCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVG 545
P+++ + +P E+ + + R+D RN FTIDP A D DDALSI + G+ VG
Sbjct: 236 YPKNVETAAEKIPAEISEADYAEREDFRNVTTFTIDPKDAKDFDDALSIRLIKPGLWEVG 295
Query: 546 VHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIF 605
VHIADV+++V G+ +D EA+ R+TSVY++ R IPMLP L + SL P ++LAFS+
Sbjct: 296 VHIADVTHYVKEGSVIDKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPDEEKLAFSVI 355
Query: 606 WDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWS 665
+++N G+V D I T+I+S + +YE AQ +I+ GEG
Sbjct: 356 FNMNEKGEVKDSRIVHTIIKSDRRFTYEEAQKVIE----------TGEG----------- 394
Query: 666 DVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEE 725
D I L ++++IL+ +R GA+ + + F DE G P ++ N L EE
Sbjct: 395 DYKEEILELNKLTQILRKQRLAAGAIDFDRIEVKFEIDETGKPLSVYFKESKEANKLIEE 454
Query: 726 FMLLANKTAAEVI--------ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS 777
FMLLAN+T AE I A+ FP R H P+ KL F ++ G ++ TS
Sbjct: 455 FMLLANRTVAERIGKVPKNKKAKVFP----YRIHDLPDPDKLENLNWFINRFGYKIRTSG 510
Query: 778 SG-QFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPV 836
S + +S+ + + +K+ +++ + R MQ A Y + GHY LAF
Sbjct: 511 SKTEISKSINRLLDDIKNKKEQ-NLVETVSLRAMQKARYSTH-------NIGHYGLAFDY 562
Query: 837 YTHFTSPLRRYPDLVVHRTLNAAL 860
YTHFTSP+RR+PD++VHR L L
Sbjct: 563 YTHFTSPIRRFPDMMVHRLLTRYL 586
>gi|163786944|ref|ZP_02181392.1| putative exoribonuclease [Flavobacteriales bacterium ALC-1]
gi|163789222|ref|ZP_02183664.1| putative exoribonuclease [Flavobacteriales bacterium ALC-1]
gi|159875437|gb|EDP69499.1| putative exoribonuclease [Flavobacteriales bacterium ALC-1]
gi|159878804|gb|EDP72860.1| putative exoribonuclease [Flavobacteriales bacterium ALC-1]
Length = 732
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 157/461 (34%), Positives = 239/461 (51%), Gaps = 36/461 (7%)
Query: 414 VVLVKDL--PDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQ 471
V + KD+ P + K+ E+GD V +++W E++ P V+ V G+ GE +
Sbjct: 170 VKMYKDIFVPINKIKKAEDGDK------VLVSLEDWPEKADSPYGKVIEVLGKPGEHNTE 223
Query: 472 INAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDA 531
IN+I+ E + F + + + + EE+ R+D+R FTIDP A D DDA
Sbjct: 224 INSIMAEYGLPLE-FPHDVETYANNLDISIKPEEIAKRRDMRKDLTFTIDPKDAKDFDDA 282
Query: 532 LSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVG 591
LS L +G+ VG+HIADVS++V PGT LD EA R+TS+Y++ R +PMLP LS
Sbjct: 283 LSFTVLENGLYEVGIHIADVSHYVQPGTVLDDEAYERATSIYLVDRVVPMLPERLSNGAC 342
Query: 592 SLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTL 651
SL P ++ FS + +N+ ++ + W GRTV S + +YE AQ +I+ K +N +
Sbjct: 343 SLRPHEEKYTFSAVFQMNNKCEIKNEWFGRTVTYSDARFAYEEAQAVIESK-----TNEI 397
Query: 652 GEGWPQ---LYGQFEWSD--VVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYG 706
PQ L G+ +D + +I + E++K ++ +R +GA+ + + F D+
Sbjct: 398 ----PQDVSLTGKTYKTDQAIADAILKMDELAKKMRSQRMREGAISFDKVEVKFNLDDQA 453
Query: 707 TPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRR-HPAPNMRKLREFEAF 765
P +D N L EEFMLLAN+ +E I + P + R H P+ KL + +
Sbjct: 454 NPVGVFFKTSKDANKLIEEFMLLANRKVSEFIGKQNPKKTFVYRVHDEPDESKLAQLQTV 513
Query: 766 CSKHGLQLDTSSSGQFHQSLEQAREKL--KDDYVLFDILINYATRPMQLASYFCSGDFKD 823
S+ G +L+ G SL + + K + L D L R M A Y
Sbjct: 514 VSRFGHKLNFRDKGSIASSLNNLLKDVVGKKEQNLVDTL---TIRTMSKAEYTTH----- 565
Query: 824 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
+ GHY LAF Y+HFTSP+RRYPD++ HR L L+ EK
Sbjct: 566 --NIGHYGLAFNYYSHFTSPIRRYPDVMAHRLLQQYLDGEK 604
>gi|340502589|gb|EGR29265.1| rnb family protein, putative [Ichthyophthirius multifiliis]
Length = 852
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 171/489 (34%), Positives = 251/489 (51%), Gaps = 44/489 (8%)
Query: 405 PTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGR 464
P + +YP+M+ + L D+IKK I+ V + W P + G
Sbjct: 298 PNNNRYPRMIPI---LGDNIKK----FQGQIKDFYVKGTLKNWERNQQNPTILCEDILGS 350
Query: 465 GGEVEPQINAILYENAICCSGFSPESLSCLPCVPWE----VPQEELLSRKDLRNFCIFTI 520
G++E + A+L EN I FS ++ L E +P+EE R DL IFTI
Sbjct: 351 IGDIEIECRALLEENQIISDDFSIKTKEYLDKKVNEQEEIIPKEERKKRLDLTKEIIFTI 410
Query: 521 DPSTATDLDDALSIERL-SDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 579
DP A DLDDALSI+ + + I +GVHIADVS+FV G+ +D++AQ+R+TSVY++ R I
Sbjct: 411 DPVDARDLDDALSIKLIEKNKIVEIGVHIADVSFFVKEGSPVDLDAQLRTTSVYLVHRVI 470
Query: 580 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW---IGRTVIRSCCKLSYEHAQ 636
MLP +L + + SLN +RLAFS+F+ ++ G+++ + +++I SC K SY+ Q
Sbjct: 471 TMLPRILCDNLCSLNSNAERLAFSVFFQMDFQGNLIQDFKPIFVKSIINSCSKFSYDTVQ 530
Query: 637 DIIDGKFDVESSNTLGEGWPQLY-------GQFEWSDVVRS-------IKSLYEVSKI-- 680
IIDG+ S + QLY Q + VR + + +SKI
Sbjct: 531 KIIDGEIQNYSQIII-----QLYINKYIINRQLPEQNKVREGINGDEMFEKILLLSKIGM 585
Query: 681 -LKDKRFTDGALRLENSKPVFLFDEYGT-PYDSVLSGREDLNFLFEEFMLLANKTAAEVI 738
+ +R +G L +ENSK F D P + R++ NF+ EEFMLLAN+ + I
Sbjct: 586 EKRKRRTENGVLTIENSKKRFCLDPNTLFPQSYTIEVRKEANFIVEEFMLLANQLVGKKI 645
Query: 739 ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQ-LDTSSSGQFHQSLE--QAREKLKDD 795
+ + ++LRRH P +K F K LQ + + Q L+ Q E + +
Sbjct: 646 VESCEEISVLRRHEYPQEKKQERFNDTLEKLKLQKIQFKNLNQLINFLKEIQQNENISEQ 705
Query: 796 YVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRT 855
+F L ++ A YF + + D W H+AL F VYTHFTSP+RRYPDL+VHR
Sbjct: 706 KKIF--LKKQLFLILEPAQYFIANLLEKDQ-WKHFALNFDVYTHFTSPIRRYPDLIVHRV 762
Query: 856 LNAALEAEK 864
L L EK
Sbjct: 763 LEQVLLHEK 771
>gi|256072320|ref|XP_002572484.1| ribonuclease II-related [Schistosoma mansoni]
Length = 1333
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 174/531 (32%), Positives = 254/531 (47%), Gaps = 89/531 (16%)
Query: 441 AARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVP-- 498
RI +W E S +P + FG E+E IL E I F+PE L LP P
Sbjct: 747 VCRITKWFENSKYPHGVIEQNFGNLNELEKATENILLEYGITDDQFTPEELQGLPTSPQE 806
Query: 499 WEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPG 558
+++P+ E R+D R+ C+ TIDP A D DDAL I RL++G+ +VG+HIADVSYFV P
Sbjct: 807 FQIPKIEYERRRDFRSHCVITIDPKDAKDFDDALHITRLNNGLYQVGIHIADVSYFVYPN 866
Query: 559 TALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW 618
+ LD A R+TSVY++Q+ IPMLP +LS+ + SL P DRLAFSI + G++VD W
Sbjct: 867 SPLDKRAADRTTSVYLVQKVIPMLPPILSQHLCSLVPNEDRLAFSILLTVKENGEIVDEW 926
Query: 619 IGRTVIRSCCKLSYEHAQDII---DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 675
GR++IRS C+L+Y+ A II +E + L E P+ F + D+ + SL+
Sbjct: 927 FGRSIIRSRCRLTYDEAWSIIQMTQSNPAIEDKSCLLEFLPKPEAPFTFEDLQHCLSSLH 986
Query: 676 EVSKILKDKRFTDGALRLENSKPVFLF-----------DEYGT---PYDSVLSGREDLNF 721
+++ L+ R +GA+ LE + F F +E T P + R +
Sbjct: 987 LIAQNLRSHRIENGAVSLEKLELNFNFPKPLSVMEKCTNECSTTRWPQGFSVKVRNPAHH 1046
Query: 722 LFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQF 781
L EE+M++AN++ A + F A LR HP P + + + F L D
Sbjct: 1047 LIEEWMIVANQSVARFLFGNFIKRATLRNHPKPEKKNISYDDHFL--RMLSFDP------ 1098
Query: 782 HQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFT 841
QS+ Q ++NY W HY L+ P+YTHFT
Sbjct: 1099 -QSILQQNNI---------TMLNYT--------------------W-HYGLSIPLYTHFT 1127
Query: 842 SPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLE 901
SP+RRY DL+VHR + L + + ++ ++N KD +S
Sbjct: 1128 SPIRRYADLMVHRQIARILGCDNYVYPELQISFQSNDDS-----------IQKDIKDS-- 1174
Query: 902 GREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLK 952
DI + VA CNDR+L R +A L++ L+
Sbjct: 1175 -----------------DIDLLVA-WCNDRRLKARRAGEASQHLFLTACLR 1207
Score = 245 bits (626), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 139/338 (41%), Positives = 200/338 (59%), Gaps = 13/338 (3%)
Query: 544 VGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFS 603
VGVHIADVSYFV P + +D EA R+TS+Y++Q +PMLP LL EE SLNPG D+LAFS
Sbjct: 15 VGVHIADVSYFVKPNSLVDKEAASRATSIYLVQLCVPMLPRLLCEEQCSLNPGEDKLAFS 74
Query: 604 IFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFE 663
+ + + ++ W GRT IRSCCKLSYE AQ ID D + S++ G+ ++ +
Sbjct: 75 VVFTVTEDAKILTTWFGRTFIRSCCKLSYEDAQGFIDHP-DRDWSSS---GFVKVDEPYT 130
Query: 664 WSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVF-LFDEYGTPYDSVLSGREDLNFL 722
D+ +++ L +++ ++ RF GALRL+ K F L +E G P + N+L
Sbjct: 131 IMDICQNVLKLNDLATKMRKSRFHSGALRLDQVKSTFSLNNETGLPLGIAPYISKQSNWL 190
Query: 723 FEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFH 782
EE+ML ANK+ AE +A+ PDSA LRRHP+P++++L E + + G+ ++ S+G
Sbjct: 191 IEEWMLAANKSVAERLAKYLPDSAFLRRHPSPSVKQLTEVSSSLNVAGININIDSAGSIQ 250
Query: 783 QSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTS 842
L + L+ + L + + T+ M LA YFC G + HYAL +YTHFTS
Sbjct: 251 DKL--PLKTLEHEARLL-VTVALLTKTMNLAVYFCLGLLPSELSPAHYALNMQLYTHFTS 307
Query: 843 PLRRYPDLVVHRTLNAAL-----EAEKLYWKHRRMLPK 875
P+RRY D++VHR L+A L + EK W PK
Sbjct: 308 PIRRYADVIVHRQLSAILAKEESDPEKADWYLSTAFPK 345
>gi|329956491|ref|ZP_08297088.1| ribonuclease R [Bacteroides clarus YIT 12056]
gi|328524388|gb|EGF51458.1| ribonuclease R [Bacteroides clarus YIT 12056]
Length = 719
Score = 250 bits (639), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 156/430 (36%), Positives = 224/430 (52%), Gaps = 45/430 (10%)
Query: 442 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWE 500
++ EW +++ P V+ + G+ G+ +++AIL E + P S+ +P E
Sbjct: 197 VKVVEWPDKAKNPIGQVIDILGKAGDNTTEMHAILAEFGLPY--VYPASVEKAADKIPAE 254
Query: 501 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 560
+P EE R+D RN FTIDP A D DDALS+ +L D + VGVHIADV+++V G
Sbjct: 255 IPAEEYAKREDFRNITTFTIDPKDAKDFDDALSVRKLKDNLWEVGVHIADVTHYVTEGGI 314
Query: 561 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIG 620
+D EA+ R+TSVY++ R IPMLP L + SL P ++LA+S +++ G+V + I
Sbjct: 315 IDKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPDEEKLAYSAIFEMTDKGEVKNSRIV 374
Query: 621 RTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKI 680
TVI+S + +YE AQ II+ K EG D I L ++KI
Sbjct: 375 HTVIKSDRRFTYEEAQQIIETK----------EG-----------DFKEEILKLDSLAKI 413
Query: 681 LKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR 740
L++KRF GA+ + + F DE G P +D N L EEFMLLAN+T AE I R
Sbjct: 414 LREKRFAAGAINFDRYEVKFEIDEKGKPVSVYFKESKDANKLVEEFMLLANRTVAEKIGR 473
Query: 741 A----FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREK 791
P R H P+ KL F ++ G +L TS S + L+ + K
Sbjct: 474 VPKNKKPKVFPYRIHDLPDPEKLDNLSQFIARFGYKLRTSGTKTDVSKSINHLLDDIQGK 533
Query: 792 LKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 851
++ +++ + R MQ A Y + GHY LAF YTHFTSP+RRYPD++
Sbjct: 534 KEE-----NLIETVSIRAMQKARYSVH-------NIGHYGLAFDYYTHFTSPIRRYPDMM 581
Query: 852 VHRTLNAALE 861
VHR L L+
Sbjct: 582 VHRLLTKYLD 591
>gi|212692333|ref|ZP_03300461.1| hypothetical protein BACDOR_01829 [Bacteroides dorei DSM 17855]
gi|237711407|ref|ZP_04541888.1| ribonuclease R [Bacteroides sp. 9_1_42FAA]
gi|265752813|ref|ZP_06088382.1| ribonuclease R [Bacteroides sp. 3_1_33FAA]
gi|345514123|ref|ZP_08793637.1| ribonuclease R [Bacteroides dorei 5_1_36/D4]
gi|423240669|ref|ZP_17221783.1| ribonuclease R [Bacteroides dorei CL03T12C01]
gi|212665210|gb|EEB25782.1| ribonuclease R [Bacteroides dorei DSM 17855]
gi|229435940|gb|EEO46017.1| ribonuclease R [Bacteroides dorei 5_1_36/D4]
gi|229454102|gb|EEO59823.1| ribonuclease R [Bacteroides sp. 9_1_42FAA]
gi|263235999|gb|EEZ21494.1| ribonuclease R [Bacteroides sp. 3_1_33FAA]
gi|392643631|gb|EIY37380.1| ribonuclease R [Bacteroides dorei CL03T12C01]
Length = 715
Score = 250 bits (639), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 177/564 (31%), Positives = 272/564 (48%), Gaps = 85/564 (15%)
Query: 309 NGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVG 368
N P T ++ MN + A+ + + P G V+ I+ER+ D VG
Sbjct: 96 NSFIPDDGGETIFIAERNSAHAMNNDKVKIALFAKRKNRNPEGEVIEILERA--NDTFVG 153
Query: 369 FLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDL--PDSIKK 426
L V +++ + +NR+ L D+ P K
Sbjct: 154 TLKVEKFYAFL------LTENRT------------------------LANDIFIPKDKLK 183
Query: 427 RLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGF 486
+ GD + +I EW EE+ P V+ + G+ GE +++AIL E +
Sbjct: 184 GGKNGDKAV------VKIVEWPEEAKNPIGQVIDILGKAGENTTEMHAILAEFGLPY--V 235
Query: 487 SPESL-SCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVG 545
P+++ + +P E+ + + R+D RN FTIDP A D DDALSI + G+ VG
Sbjct: 236 YPKNVETAAEKIPAEISEADYAEREDFRNVTTFTIDPKDAKDFDDALSIRLIKPGLWEVG 295
Query: 546 VHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIF 605
VHIADV+++V G+ +D EA+ R+TSVY++ R IPMLP L + SL P ++LAFS+
Sbjct: 296 VHIADVTHYVKEGSVIDKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPDEEKLAFSVI 355
Query: 606 WDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWS 665
+++N G+V D I T+I+S + +YE AQ +I+ GEG
Sbjct: 356 FNMNEKGEVKDSRIVHTIIKSDRRFTYEEAQKVIE----------TGEG----------- 394
Query: 666 DVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEE 725
D I L ++++IL+ +R GA+ + + F DE G P ++ N L EE
Sbjct: 395 DYKEEILELNKLAQILRKQRLAAGAIDFDRIEVKFEIDETGKPLSVYFKESKEANKLIEE 454
Query: 726 FMLLANKTAAEVI--------ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS 777
FMLLAN+T AE I A+ FP R H P+ KL F ++ G ++ TS
Sbjct: 455 FMLLANRTVAERIGKVPKNKKAKVFP----YRIHDLPDPDKLENLNWFINRFGYKIRTSG 510
Query: 778 SG-QFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPV 836
S + +S+ + + +K+ +++ + R MQ A Y + GHY LAF
Sbjct: 511 SKTEISKSINRLLDDIKNKKEQ-NLVETVSLRAMQKARYSTH-------NIGHYGLAFDY 562
Query: 837 YTHFTSPLRRYPDLVVHRTLNAAL 860
YTHFTSP+RR+PD++VHR L L
Sbjct: 563 YTHFTSPIRRFPDMMVHRLLTRYL 586
>gi|436834031|ref|YP_007319247.1| ribonuclease R [Fibrella aestuarina BUZ 2]
gi|384065444|emb|CCG98654.1| ribonuclease R [Fibrella aestuarina BUZ 2]
Length = 898
Score = 250 bits (639), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 181/528 (34%), Positives = 253/528 (47%), Gaps = 84/528 (15%)
Query: 346 TKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTP 405
+KR GRV SI +R R +VG L K+ + VPD I
Sbjct: 243 SKRLVGRVASIAKRG--RPELVGTLE---------------KRGKGLAVVPDSRRI---- 281
Query: 406 THPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVA--ARIDEWNEESPFPQAHVLHVFG 463
Y +++ PD + G A + +++ R + +E + V+ V G
Sbjct: 282 ----YHDILI-----PDD-----KLGGAVLNEKVLVRLTRYPDAGDEDGLFEGEVVTVLG 327
Query: 464 RGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPS 523
+ GE +++AIL E + F E +P + + E+ R+D R FTIDP
Sbjct: 328 KAGEHNTEMHAILAEFGLPNE-FPAEVERESEEIPVTIDEAEIARRRDFRGVTTFTIDPV 386
Query: 524 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 583
A D DDALS+ L +G +GVHIADV+++VLPGT L+ EA R+TSVY++ R +PMLP
Sbjct: 387 DAKDFDDALSVRYLDNGNYEIGVHIADVTHYVLPGTELEEEAYKRATSVYLVDRVVPMLP 446
Query: 584 VLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKF 643
LS V SL P D+L FS ++L + + W GRT I S + SYE AQ I++
Sbjct: 447 EKLSNGVCSLRPHEDKLTFSAVFELTTDAKIEAEWFGRTAIHSDRRFSYEEAQAILNA-- 504
Query: 644 DVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD 703
GEG D V+ + L E++ L+D+RF GA+ E + F D
Sbjct: 505 --------GEG-----------DFVKELTLLNELAHKLRDQRFRHGAINFETPEVRFKLD 545
Query: 704 EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA--RAFPD--SALLRRHPAPNMRKL 759
E G P V R+D N L EEFMLLANK AE + PD + + R H PN KL
Sbjct: 546 ENGVPLAVVPKIRQDTNKLIEEFMLLANKRVAEFVVSLSKGPDENTMVYRVHEGPNEDKL 605
Query: 760 REFEAFCSKHGLQLDTSSS------GQFHQSLEQAREKLKDDYVLFDILINYATRPMQLA 813
+ F F K G +L+ +S +F +E E+ +L A R M A
Sbjct: 606 QVFADFARKLGYKLNVTSDKLSTAMNKFMADIEGKPEQT--------MLSQLAVRTMSKA 657
Query: 814 SYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 861
Y D GH+ LAF Y+HFTSP+RRYPD++ HR L L+
Sbjct: 658 RYSTD-------DIGHFGLAFRRYSHFTSPIRRYPDMMAHRLLQHYLD 698
>gi|409042780|gb|EKM52263.1| hypothetical protein PHACADRAFT_211534 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1004
Score = 250 bits (639), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 182/540 (33%), Positives = 263/540 (48%), Gaps = 74/540 (13%)
Query: 347 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNY--KGGSRKDAKKNRSSLSVPDREYIQLT 404
++PTGR+V +I+R+ W +Y S + +SLS ++ + T
Sbjct: 375 RQPTGRIVGVIKRN--------------WRSYVCHIDSSSLTSSHETSLS---QQTVFAT 417
Query: 405 PTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGR 464
P P+ I+ R + A + +++ ID W+ S +P+ H + G+
Sbjct: 418 PVSRSLPR-----------IRLRTRQAPALLGQKILVT-IDRWDNTSRYPEGHFVRALGK 465
Query: 465 GGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQE-----ELLSRKDLRNFCI 517
E + ++L E + F L CLP W VP + E R+DLR+ I
Sbjct: 466 VESKEAEQESLLLEFDVPYRPFGKAILDCLPPEGDAWVVPPKSDANPEWRDREDLRDLLI 525
Query: 518 FTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 577
+IDP D+DDAL L +G GVHIADVS FVLP T +D EA R T+VY++ +
Sbjct: 526 CSIDPPGCQDIDDALHARPLPNGNVEAGVHIADVSRFVLPDTPMDSEAAARGTTVYLVDK 585
Query: 578 KIPMLPVLLSEEVGSLNPGVDRLAFSIFW-----DLNSAGDVVDRWIGRTVIRSCCKLSY 632
+I MLP LL + SL P V+RLAFS+ W ++ ++V+ ++VI S +Y
Sbjct: 586 RIDMLPALLGTNLCSLRPFVERLAFSVIWVSAAREMTPEAEIVNVRFTKSVIASKQAFTY 645
Query: 633 EHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALR 692
E AQ D D ++ L EG I+ L ++ L+ R GAL
Sbjct: 646 EEAQIRKD---DPTQTDALTEG----------------IRLLNRLAVQLRAGRMAAGALN 686
Query: 693 LENSKPVFLFD--EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRR 750
L + + + E P D + N L EEFMLLAN + A I FP +A+LRR
Sbjct: 687 LASPEVKIHLESAESSDPVDVEQKELRETNSLVEEFMLLANISVARKIQETFPQTAVLRR 746
Query: 751 H---PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YA 806
H P N KL+ + + GL LD SSSG SL++ + + F+ L+ A
Sbjct: 747 HMPPPRTNFEKLQ--DVLKKRRGLALDVSSSGALAASLDKCTDAAEP---AFNTLVRIMA 801
Query: 807 TRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
TR M A YFC+G DT +GHY LA P+YTHFTSP+RRY D++ HR L AA+ L+
Sbjct: 802 TRCMLSAEYFCAGSVGRDT-FGHYGLATPIYTHFTSPIRRYADVLAHRQLAAAIGHAPLH 860
>gi|320169157|gb|EFW46056.1| DIS3-like exonuclease 1 [Capsaspora owczarzaki ATCC 30864]
Length = 1145
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 176/569 (30%), Positives = 273/569 (47%), Gaps = 69/569 (12%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKD---AKKNRSSLSV--PDREYIQL 403
PTGRVV+I++R QW +Y +D A+ +SL+ + +
Sbjct: 496 PTGRVVAIVQR--------------QWRDYVCTIVRDSAAAQSTSTSLASTGANVSRVLC 541
Query: 404 TPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG 463
P + PK+ + + +E + + RID W S +P H+++ G
Sbjct: 542 VPMDSRIPKIRIATRQA------------VQLEGQRLVVRIDRWEYNSQYPTGHLVNSLG 589
Query: 464 RGGEVEPQINAILYENAICCSGFSPESLSCLPC----VPWEVPQEELLSRKDLRNFCIFT 519
++ + AIL E+ I + S L LP PW++P ++ R+D+R+ + +
Sbjct: 590 PIENLDTETAAILVEHDIVLNPPSERQLQELPVHTPESPWQLPPDQAARRRDIRDSLVMS 649
Query: 520 IDPSTATDLDDALSIERLSDGISR-------------------------VGVHIADVSYF 554
IDP + D+DDALS+ RL+ + +GVHIADVSYF
Sbjct: 650 IDPLGSKDVDDALSVRRLTPAEQQYQTRHLAKKRQAAKEAPLSTAPTYELGVHIADVSYF 709
Query: 555 VLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDV 614
V + D+EA+ RST++Y+ R+ MLP +LSE++ SL DR A S+ W L+ D+
Sbjct: 710 VKENSLTDVEARARSTTIYLADRRFDMLPAVLSEQLCSLLSCEDRCAMSVIWILDENYDM 769
Query: 615 VDRWIGRTVIRSCCKLSYEHAQDI-IDGKFDVESSNTLGE-----GWPQLYGQFEWSDVV 668
+D W GRT++RS +L YE AQDI K D E + + E + + +
Sbjct: 770 LDVWYGRTLLRSSFQLYYELAQDIATHAKPDPELAELVRELRTDKSLTAAAKLAKIALMR 829
Query: 669 RSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFML 728
+I+ L +V++ + R +GAL LE ++ F FDE T D V +++ E M+
Sbjct: 830 EAIQLLMQVARKFRADRIANGALELEGTEIRFKFDENHTITDVVPKRELEIHKTVAEAMI 889
Query: 729 LANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQA 788
LAN A IA FP ALLR H P+ L A + G +D +S+ SL+
Sbjct: 890 LANHYVARQIATVFPTHALLRHHTLPSKSNLDRLVAVATACGFSMDVTSNKTIADSLDAC 949
Query: 789 REKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYP 848
+ D + ++ AT+ M A+Y +G ++ HY LA YTHFTSP+RRY
Sbjct: 950 --VVPGDPSVNKMIRTLATQAMSEAAYVSTG-MVQPSELYHYGLALDYYTHFTSPIRRYA 1006
Query: 849 DLVVHRTLNAALEAEKLYWKHRRMLPKNN 877
D+ VHR L A+L A+ + +ML N
Sbjct: 1007 DVYVHRQLMASLAADNPQREEYQMLSNPN 1035
>gi|432092218|gb|ELK24842.1| DIS3-like exonuclease 1 [Myotis davidii]
Length = 900
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 152/408 (37%), Positives = 232/408 (56%), Gaps = 9/408 (2%)
Query: 463 GRGGEVEPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLR-NFCI 517
GR G++E +I IL EN I + FS + +P PW+V EE R+DLR +
Sbjct: 252 GRIGDLEGEIATILVENNISVAPFSEAQMCKMPVNTPENPWKVSPEEERERRDLRKTHLV 311
Query: 518 FTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 577
F+IDP D+DD LS+ L++G +GVHIADV++FV P + +DIEA+ R+T+ Y+ R
Sbjct: 312 FSIDPKGCEDVDDTLSVRTLNNGNLELGVHIADVTHFVAPNSYIDIEAKTRATTYYLADR 371
Query: 578 KIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLN-SAGDVVDRWIGRTVIRSCCKLSYEHAQ 636
+ MLP +LS ++ SL GVDR A SI W+L+ ++ ++ W GRT+IRS KL YE AQ
Sbjct: 372 RYDMLPSILSADLCSLLGGVDRYAVSIMWELDKTSYEIKKVWYGRTIIRSSYKLFYEAAQ 431
Query: 637 DIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENS 696
+++DG F++ + Q + ++V +I L ++++ ++ KR GAL LE
Sbjct: 432 ELLDGNFNIIDDIPEFRDLDEKSRQAKLEELVWAIGKLTDIARHVRAKRDLCGALELEGV 491
Query: 697 KPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNM 756
+ DE D + +++ E M+LAN A+ I +FP ALLR+HP P+
Sbjct: 492 EVRVQLDEKKNIRDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQ 551
Query: 757 RKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYF 816
E G +DT S+ SL+ A + +D ++ +L + AT+ M A YF
Sbjct: 552 EFFSELRECAKAKGFFIDTRSNKTLADSLDNAND--PNDPIVNRLLRSMATQAMSNALYF 609
Query: 817 CSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
+G ++ ++ HY LA YTHFTSP+RRY D++VHR L AA+ +K
Sbjct: 610 STGSCAEE-EFHHYGLALDKYTHFTSPIRRYADIIVHRLLMAAISKDK 656
Score = 47.0 bits (110), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 53/99 (53%), Gaps = 8/99 (8%)
Query: 141 AYTNKDDNPSHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHN-RLEAYCKIEG 199
++ ++ + + E+ K + H +E + ++ G + + VN H ++EA+ +++G
Sbjct: 126 SFKSRRERENESQESHRKEYPEHLPLEVLEAGIKSGRYIQGILNVNKHRAQIEAFVRLQG 185
Query: 200 VQT-------DVLITGIAAQNRAVEGDFVLIKVDRLSLW 231
+ D+LI G+ A+NR++ GD V++++ S W
Sbjct: 186 ASSKDSDLVSDILIHGMKARNRSIHGDMVVVELLPKSEW 224
>gi|317474743|ref|ZP_07934017.1| ribonuclease R [Bacteroides eggerthii 1_2_48FAA]
gi|316909424|gb|EFV31104.1| ribonuclease R [Bacteroides eggerthii 1_2_48FAA]
Length = 719
Score = 249 bits (637), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 154/430 (35%), Positives = 225/430 (52%), Gaps = 45/430 (10%)
Query: 442 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWE 500
++ EW +++ P V+ + G+ G+ +++AIL E + P S+ +P E
Sbjct: 197 VKVVEWPDKAKNPIGQVIDILGKAGDNTTEMHAILAEFGLPY--VYPTSVEKAADKIPAE 254
Query: 501 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 560
+P EE R+D RN FTIDP A D DDALS+ +L D + VGVHIADV+++V G+
Sbjct: 255 IPAEEYAKREDFRNITTFTIDPKDAKDFDDALSVRKLKDNLWEVGVHIADVTHYVTEGSI 314
Query: 561 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIG 620
+D EA+ R+TSVY++ R IPMLP L + SL P ++LA+S +++ G++ + I
Sbjct: 315 IDKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPNEEKLAYSAIFEMTDKGEIKNSRIV 374
Query: 621 RTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKI 680
TVI+S + +YE AQ II+ K EG D I L ++KI
Sbjct: 375 HTVIKSDRRFTYEEAQQIIETK----------EG-----------DFKEEILKLDALAKI 413
Query: 681 LKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR 740
L++KRF GA+ + + F DE G P +D N L EEFMLLAN+T AE I R
Sbjct: 414 LREKRFAAGAINFDRYEVKFEIDEKGKPISVYFKESKDANKLVEEFMLLANRTVAEKIGR 473
Query: 741 A----FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREK 791
P R H P+ KL F ++ G +L TS S + L+ + K
Sbjct: 474 VPKSKKPKVFPYRIHDLPDPEKLDNLSQFIARFGYKLRTSGTKTDVSKSINHLLDDIQGK 533
Query: 792 LKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 851
++ +++ + R MQ A Y + GHY L+F YTHFTSP+RRYPD++
Sbjct: 534 KEE-----NLIETVSIRAMQKARYSVH-------NIGHYGLSFDYYTHFTSPIRRYPDML 581
Query: 852 VHRTLNAALE 861
VHR L L+
Sbjct: 582 VHRLLTKYLD 591
>gi|374596087|ref|ZP_09669091.1| RNAse R [Gillisia limnaea DSM 15749]
gi|373870726|gb|EHQ02724.1| RNAse R [Gillisia limnaea DSM 15749]
Length = 736
Score = 249 bits (637), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 168/537 (31%), Positives = 256/537 (47%), Gaps = 54/537 (10%)
Query: 328 NDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAK 387
N +N E + + ++ G VV II+R +R VG L + + F +
Sbjct: 114 NKALNGDEVEIYIYNKRNKRKSEGEVVKIIKR--KRTEFVGILQLKENFGF--------- 162
Query: 388 KNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEW 447
+++ D PKM D+ K L+ D + V ++EW
Sbjct: 163 -----VAIAD-------------PKMST---DIFVQKNKILDAQDG----DKVVVILEEW 197
Query: 448 NEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELL 507
E++ P + V G+ GE + ++++IL + + F E + + E+
Sbjct: 198 PEKADSPFGRIKEVLGKPGEHQTEMHSILAQYGLPHE-FPKEIEDFANSIDTTIKDAEIK 256
Query: 508 SRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQV 567
R+DLR FTIDP A D DDALS E L +G +G+HIADVS+++LPGT LD EA
Sbjct: 257 KRRDLRETLTFTIDPQDAKDFDDALSFEVLKNGNYNIGIHIADVSHYLLPGTVLDQEAYE 316
Query: 568 RSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSC 627
R+TS+Y++ R +PMLP +LS SL P ++ FS +++++ G ++D+W GRTV S
Sbjct: 317 RATSIYLVDRVVPMLPEVLSNNACSLRPNEEKYTFSAIFEIDTEGHLIDQWFGRTVTNSD 376
Query: 628 CKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFT 687
+ +YE AQ II + + GE Q G DVV +I ++ +++ ++++R
Sbjct: 377 YRFAYEEAQHII----ETNQAEIPGEISIQESGYRVNDDVVSAITTMNDLAIKMRERRMK 432
Query: 688 DGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSAL 747
GA+ + + F E P + N L EEFMLLANK AE I + P
Sbjct: 433 AGAISFDKVEVKFQLSETNEPVGVYFKTSNEANKLIEEFMLLANKKVAEFIGKQTPKKTF 492
Query: 748 LRR-HPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKL--KDDYVLFDILIN 804
+ R H P+ KL + SK G ++D SL + K + + D L
Sbjct: 493 VYRCHDEPDESKLNSLQTVISKFGYKIDLKDKKSIANSLNTLLSDVQGKKEQNMVDTL-- 550
Query: 805 YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 861
R M A Y + GHY LAF Y+HFTSP+RRYPD++ HR L L+
Sbjct: 551 -TIRTMSKAYYSTK-------NIGHYGLAFDHYSHFTSPIRRYPDVMTHRLLQEYLD 599
>gi|150003660|ref|YP_001298404.1| ribonuclease R [Bacteroides vulgatus ATCC 8482]
gi|294777520|ref|ZP_06742971.1| ribonuclease R [Bacteroides vulgatus PC510]
gi|319640119|ref|ZP_07994846.1| ribonuclease R [Bacteroides sp. 3_1_40A]
gi|345517140|ref|ZP_08796618.1| ribonuclease R [Bacteroides sp. 4_3_47FAA]
gi|149932084|gb|ABR38782.1| ribonuclease R [Bacteroides vulgatus ATCC 8482]
gi|254833905|gb|EET14214.1| ribonuclease R [Bacteroides sp. 4_3_47FAA]
gi|294448588|gb|EFG17137.1| ribonuclease R [Bacteroides vulgatus PC510]
gi|317388397|gb|EFV69249.1| ribonuclease R [Bacteroides sp. 3_1_40A]
Length = 715
Score = 249 bits (637), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 177/564 (31%), Positives = 271/564 (48%), Gaps = 85/564 (15%)
Query: 309 NGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVG 368
N P T ++ MN + A+ + + P G V+ I+ER+ D VG
Sbjct: 96 NSFIPDDGGETIFIAERNSAHAMNNDKVKIALFAKRKNRNPEGEVIEILERA--NDTFVG 153
Query: 369 FLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDL--PDSIKK 426
L V +++ + +NR+ L D+ P K
Sbjct: 154 TLKVEKFYAFL------LTENRT------------------------LANDIFIPKDKLK 183
Query: 427 RLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGF 486
+ GD + +I EW EE+ P V+ + G+ GE +++AIL E +
Sbjct: 184 GGKNGDKAV------VKIVEWPEEAKNPIGQVIDILGKAGENTTEMHAILAEFGLPY--V 235
Query: 487 SPESL-SCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVG 545
P+++ + +P E+ + + R+D RN FTIDP A D DDALSI + G+ VG
Sbjct: 236 YPKNVETAAEKIPAEISEADYAEREDFRNVTTFTIDPKDAKDFDDALSIRLIKPGLWEVG 295
Query: 546 VHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIF 605
VHIADV+++V G +D EA+ R+TSVY++ R IPMLP L + SL P ++LAFS+
Sbjct: 296 VHIADVTHYVKEGGVIDKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPDEEKLAFSVI 355
Query: 606 WDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWS 665
+++N G+V D I T+I+S + +YE AQ +I+ GEG
Sbjct: 356 FNMNEKGEVKDSRIVHTIIKSDRRFTYEEAQKVIE----------TGEG----------- 394
Query: 666 DVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEE 725
D I L ++++IL+ +R GA+ + + F DE G P ++ N L EE
Sbjct: 395 DYKEEILELNKLAQILRKQRLAAGAIDFDRVEVKFEIDETGKPLSVYFKESKEANKLIEE 454
Query: 726 FMLLANKTAAEVI--------ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS 777
FMLLAN+T AE I A+ FP R H P+ KL F ++ G ++ TS
Sbjct: 455 FMLLANRTVAEKIGKVPKNKKAKVFP----YRIHDLPDPDKLENLNWFINRFGYKIRTSG 510
Query: 778 SG-QFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPV 836
S + +S+ + + +K+ +++ + R MQ A Y + GHY LAF
Sbjct: 511 SKTEISKSINRLLDDIKNKKEQ-NLVETVSLRAMQKARYSTH-------NIGHYGLAFDY 562
Query: 837 YTHFTSPLRRYPDLVVHRTLNAAL 860
YTHFTSP+RR+PD++VHR L L
Sbjct: 563 YTHFTSPIRRFPDMMVHRLLTRYL 586
>gi|126275931|ref|XP_001387162.1| 3'-5' exoribonuclease required for 3 end formation of 5.8S rRNA
[Scheffersomyces stipitis CBS 6054]
gi|126213031|gb|EAZ63139.1| 3'-5' exoribonuclease required for 3 end formation of 5.8S rRNA
[Scheffersomyces stipitis CBS 6054]
Length = 989
Score = 249 bits (637), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 217/724 (29%), Positives = 336/724 (46%), Gaps = 120/724 (16%)
Query: 160 FAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEGD 219
F ++S + ++ G ++ + ++++N L+ ++ + +LI G NRA D
Sbjct: 246 FPEYYSNSRIMAGVKNGTLYQGMLNISSYNFLQGTVQVPAFRKPLLIVGSQNLNRAFNSD 305
Query: 220 FVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCTLL 279
V+++ L K K +++IVE+SN
Sbjct: 306 SVIVE-----LLPKDKWREPSTTIVEESN------------------------------- 329
Query: 280 SEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSA 339
I +D+++ E ++E + G ++ E++ +Q+ A++ S+
Sbjct: 330 ----IGSNDNANDE--DEEDVGSAGSGVVS--------DKERILLAQE-----ALKATSS 370
Query: 340 MISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDRE 399
+PT RVV I+ RS W Y G + SS+S D
Sbjct: 371 SAGVQKRLQPTARVVGIMRRS--------------WRYYVG------QIAPSSVSSDD-- 408
Query: 400 YIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVL 459
T K ++++ K LP I+ R + + +V +D W +S +P H +
Sbjct: 409 ----TGNASKSCFVILMDKVLP-KIRIRTRKAKEFLGQRIVVV-VDSWPADSRYPNGHFV 462
Query: 460 HVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP--CVPWEVPQ------EELLSRKD 511
G E + A+L E+ + FS L CLP W VP +L R D
Sbjct: 463 RTLGEIESAEAETEALLLEHDVEYRPFSKNVLDCLPEEGDNWVVPDLVNTDDPKLKKRVD 522
Query: 512 LRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTS 571
LR+ + +IDP D+DDAL + L +G VGVHIADV++FV P TALD E R TS
Sbjct: 523 LRDKLVCSIDPPNCVDIDDALHAKPLPNGNYEVGVHIADVTHFVKPNTALDQEGASRGTS 582
Query: 572 VYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLS 631
VY++ ++I MLP+LL + SL P VDR AFS+ W+L+ ++V ++VI+S S
Sbjct: 583 VYLVDKRIDMLPMLLGTNLCSLKPYVDRFAFSVIWELDDNANIVKVEYMKSVIKSREAFS 642
Query: 632 YEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGAL 691
YE AQ ID K + ++ S++ L ++SK LK +R GAL
Sbjct: 643 YERAQTRIDDKSQTD-------------------ELTESMRILLKLSKKLKQQRLDAGAL 683
Query: 692 RLENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRR 750
L + + V + E P + + + N L EEFMLLAN + A I ++P +A+LRR
Sbjct: 684 NLASPEVKVHMDSETSDPNEVEIKKLLETNSLVEEFMLLANISVARKIYDSYPQTAMLRR 743
Query: 751 H---PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YA 806
H PA N +L + + K GL + SS SL++ E +D Y F+ L+ +
Sbjct: 744 HAPPPATNFEQLNDMLS-VRKPGLSISLESSRALADSLDRC-EDPQDPY--FNTLLRIMS 799
Query: 807 TRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
TR M A YF SG + ++ HY LA +YTHFTSP+RRY D+V HR L A+ E L
Sbjct: 800 TRCMMAAEYFSSGSYG-YPEFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYENLD 858
Query: 867 WKHR 870
HR
Sbjct: 859 LSHR 862
>gi|255720322|ref|XP_002556441.1| KLTH0H13420p [Lachancea thermotolerans]
gi|238942407|emb|CAR30579.1| KLTH0H13420p [Lachancea thermotolerans CBS 6340]
Length = 986
Score = 249 bits (637), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 186/541 (34%), Positives = 265/541 (48%), Gaps = 73/541 (13%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 407
+PT RVVSI RS W Y G P +Q T
Sbjct: 372 QPTARVVSITRRS--------------WRQYVGQI------------APTSIDLQTGGTQ 405
Query: 408 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 467
+ ++++ K LP I+ R + +V A +D W + +P H + G
Sbjct: 406 NAF--VILMDKCLP-KIRIRTRRAKELLNKRIVIA-VDSWPDTYKYPLGHFVRELGEIES 461
Query: 468 VEPQINAILYENAICCSGFSPESLSCLPC------------VPWEVPQEELL-SRKDLRN 514
V+ + A+L E+ + FS + L CLP P + ++ LL R+DLR+
Sbjct: 462 VQAETEALLLEHDVEYRPFSKKVLDCLPAEGDDWKAPVDLSSPEAIAKDHLLPKRRDLRD 521
Query: 515 FCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYM 574
I +IDP D+DDAL ++L +G VGVHIADV++FV T LD E R TSVY+
Sbjct: 522 KLICSIDPPGCVDIDDALHAKKLPNGNWEVGVHIADVTHFVKANTPLDAEGASRGTSVYL 581
Query: 575 LQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEH 634
+ ++I MLP+LL + SL P VDR AFS+ W+L+ ++V+ ++VI+S SYE
Sbjct: 582 VDKRIDMLPMLLGTNLCSLKPYVDRFAFSVLWELDENANIVNVDFTKSVIKSREAFSYEQ 641
Query: 635 AQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLE 694
AQ ID D + L +G +++L ++S LK KR GAL L
Sbjct: 642 AQLRID---DESQKDELTQG----------------MRALLQLSIKLKQKRLDAGALNLA 682
Query: 695 NSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPA 753
+ + V + E P + + N L EEFMLLAN + A I AFP +A+LRRH A
Sbjct: 683 SPEVKVHMDSETSDPGEVEIKKLLATNSLVEEFMLLANISVARRIYEAFPQTAMLRRHAA 742
Query: 754 P---NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRP 809
P N L E + G+ + SS SL++ + L+D Y F+ L+ +TR
Sbjct: 743 PPATNFETLNEMLQL--RKGMSISLESSKALANSLDRCVD-LEDPY--FNTLVRIMSTRC 797
Query: 810 MQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKH 869
M A YF +G + D+ HY LA +YTHFTSP+RRY D+V HR L AA+ E L H
Sbjct: 798 MMAAQYFYAGAYS-YPDFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAAAIGYEPLDLNH 856
Query: 870 R 870
R
Sbjct: 857 R 857
>gi|373109324|ref|ZP_09523603.1| ribonuclease R [Myroides odoratimimus CCUG 10230]
gi|371645322|gb|EHO10848.1| ribonuclease R [Myroides odoratimimus CCUG 10230]
Length = 725
Score = 249 bits (637), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 168/517 (32%), Positives = 258/517 (49%), Gaps = 54/517 (10%)
Query: 347 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 406
K+P G VV I+ER ++ VG + + + F + S DAK
Sbjct: 131 KKPEGEVVEILERHKKQ--FVGVIEIQKNFAFV--STADAKM------------------ 168
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 466
Y + V P +GD +V I++W E++ P V+ V G+ G
Sbjct: 169 ---YTDIFV-----PKEKVGEARDGD------VVVVEIEDWPEKADSPFGKVMKVLGKQG 214
Query: 467 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 526
E +I+AIL E + F E + + +EE+ R+D+R+ FTIDP A
Sbjct: 215 EHNTEIHAILAEYGLTAE-FPKEVDEYANHLDTSITEEEIAKRRDMRDILTFTIDPKDAK 273
Query: 527 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 586
D DDALS +L +G +G+HIADVS++V GT LD EA R+TSVY++ R +PMLP +L
Sbjct: 274 DFDDALSFRQLENGFYEIGIHIADVSHYVKEGTILDEEAYNRATSVYLVDRTVPMLPEVL 333
Query: 587 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 646
S SL P D+ FS ++L+ ++ ++W GRTV S +++YE AQ IID K V
Sbjct: 334 SNFACSLRPNEDKYTFSAVFELDDKAEIRNKWFGRTVTHSDQRMAYEEAQYIIDSKDRVI 393
Query: 647 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYG 706
++ G Q + +V ++ L E++ I++ R +DGA+ + + F +E
Sbjct: 394 PADISLTGEDQEVSE----EVADAVLKLNELAMIMRKNRMSDGAISFDKVEVKFNLNEAA 449
Query: 707 TPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFC 766
P ++ N L EEFMLLAN+ +E I + + + R H P+ KL +
Sbjct: 450 EPVGVFFKQSKEANHLIEEFMLLANRKVSEFIGKQ-KKTFVYRIHDEPDQEKLFGLQTVI 508
Query: 767 SKHGLQLDTSSSGQFHQSLEQAREKL--KDDYVLFDILINYATRPMQLASYFCSGDFKDD 824
++ G ++ S +S+ + + + K + L D L A R M ASY +
Sbjct: 509 ARFGHNINFKSKSSISKSINKLLKDVEGKKEQNLVDTL---AIRCMSKASYSTN------ 559
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 861
+ GHY LAF Y+HFTSP+RRYPD++ HR L L+
Sbjct: 560 -NIGHYGLAFDYYSHFTSPIRRYPDVMAHRLLQHYLD 595
>gi|301103576|ref|XP_002900874.1| DIS3-like exonuclease 1, putative [Phytophthora infestans T30-4]
gi|262101629|gb|EEY59681.1| DIS3-like exonuclease 1, putative [Phytophthora infestans T30-4]
Length = 1369
Score = 249 bits (637), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 181/579 (31%), Positives = 273/579 (47%), Gaps = 93/579 (16%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
PTG++V I+ RSPR A S++S D +Y P
Sbjct: 620 PTGQIVGILSRSPRY--------------------HVATVIASTVSTGD-DYALAVPMDQ 658
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ PK+ + + L + KRL+ ID W +S +P H + + G G +
Sbjct: 659 RLPKVRIRSQRLDALLDKRLK------------VVIDSWAADSSYPNGHYVGILGTPGSL 706
Query: 469 EPQINAILYENAICCSGFSPESLSCLP------------CVP---------------WEV 501
+ +++A+L +N + + FS +L+CLP CV WEV
Sbjct: 707 QTELSALLVDNEVEEAPFSEAALACLPSSEECPIDIEGGCVAECSTAKRPARCGLLNWEV 766
Query: 502 PQEELLSRKDLRN-FCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 560
P+EE R+DLR +F++DP D+DDA+SI RL +G +GVHIADVSYFV G+A
Sbjct: 767 PEEETPRRRDLRTTHRVFSVDPHGCQDIDDAMSICRLPNGNVELGVHIADVSYFVEHGSA 826
Query: 561 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDR-- 617
LD+E + R T+VY++ +++ MLP +LS ++ SL+ DR A S+ W+LN DVVD
Sbjct: 827 LDLEGRRRGTTVYLVGQRLDMLPSVLSADLCSLHENRDRFAVSVMWELNGETYDVVDNST 886
Query: 618 WIGRTVIRSCCKLSYEHAQDII-DGKFDVESSNTLGEGWPQLY----------GQFEW-- 664
W GRT+IR+C ++YE A ++ D DV+ G Q + G+
Sbjct: 887 WFGRTIIRNCSSMTYEQAHRLLQDVNADVDDVPRRGSTRSQPHKDEHVEGVAGGRIPLQL 946
Query: 665 -SDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFL---FDEYGTPYDSVLSGREDLN 720
++ ++ + +V + L R + G L L + V E G D ++ +E L
Sbjct: 947 QQEIREDLRMITDVGRRLSRTRGSQGGLDLSKQEEVRFSLNVSELGQ-EDVEITVKESLE 1005
Query: 721 F--LFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSS 778
E M+ AN T A + +P ALLRRHP P+ + + + +D +++
Sbjct: 1006 IHGTIAELMIFANSTVARRLVECYPTHALLRRHPPPSGDRFTQLVQLAKARDVVIDATNN 1065
Query: 779 GQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK---------DDTDWGH 829
QSL A + D +L + A R M A Y SG D T + H
Sbjct: 1066 FTLQQSLAAAERSGRMDIKTMSLLKSLAVRVMTEAEYVSSGAVAAGDAASANGDVTRFAH 1125
Query: 830 YALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWK 868
Y L YTHFTSP+RRY D++VHR L A++ A K K
Sbjct: 1126 YGLGLQYYTHFTSPIRRYADVIVHRQLLASIAAPKTPLK 1164
>gi|325087954|gb|EGC41264.1| mitotic control protein dis3 [Ajellomyces capsulatus H88]
Length = 1037
Score = 249 bits (637), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 193/563 (34%), Positives = 274/563 (48%), Gaps = 68/563 (12%)
Query: 317 DSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWF 376
D E V S ++ + R + +S +PT RVV I++R+ W
Sbjct: 349 DEKEVVVSEKERRALQEEVRRAHGKTSEGRPQPTARVVGIVKRN--------------WR 394
Query: 377 NYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIE 436
Y G K + ++ S ++ + + P + PK+ + + D +R
Sbjct: 395 QYVGNIDKISTASQVQ-SSRRQQTVFVIPMDKRIPKIRIRTRQAQDLFGQR--------- 444
Query: 437 MELVAARIDEWNEESPFPQAHVLHVFG----RGGEVEPQINAILYENAICCSGFSPESLS 492
+ +D WN +S +P H + G +G E E A+L E + F L
Sbjct: 445 ---ILVTVDAWNRDSRYPTGHFVRSLGELETKGAETE----ALLLEYDVQYRPFPQVVLD 497
Query: 493 CLPCVP--WEVPQE----ELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGV 546
CLP W+VPQ RKDLR+ + +IDP D+DDAL L +G VGV
Sbjct: 498 CLPPEGHNWKVPQNMDDPGWRDRKDLRDLLVCSIDPPGCQDIDDALHARPLPNGNFEVGV 557
Query: 547 HIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFW 606
HIADVS+FV P T +D EA +R T+VY++ ++I MLP+LL ++ SL P V R AFS W
Sbjct: 558 HIADVSHFVKPNTPMDTEASMRGTTVYLVDKRIDMLPMLLGTDLCSLKPHVQRYAFSTIW 617
Query: 607 DLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSD 666
++ + +VV ++VI S SYE AQ ID K + +
Sbjct: 618 EMTPSAEVVSSICTKSVILSREAFSYEQAQLRIDDKSKTD-------------------E 658
Query: 667 VVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLS-GREDLNFLFE 724
+ S++ L ++SK+LK KR GAL L + + D E P V + D N L E
Sbjct: 659 LTESMRLLLKLSKLLKQKRMDAGALNLASPEVRIETDSELSDPVADVKTKALLDTNSLVE 718
Query: 725 EFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCS-KHGLQLDTSSSGQFHQ 783
EFML AN T A I ++FP +ALLRRH P E A S K + LD SSS +
Sbjct: 719 EFMLHANTTVASKIFKSFPQTALLRRHATPPPSNFEELIAQLSKKRNMTLDVSSSLALAR 778
Query: 784 SLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTS 842
SL++ + F+ L+ ATR M A YFC+G ++++ HY LA +YTHFTS
Sbjct: 779 SLDRCVDPANP---FFNTLVRILATRCMTSAEYFCAGAHA-ESEFRHYGLASSIYTHFTS 834
Query: 843 PLRRYPDLVVHRTLNAALEAEKL 865
P+RRY DLVVHR L AA+ E L
Sbjct: 835 PIRRYADLVVHRQLAAAIGYEGL 857
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 151 HQSEA-RCKIFAP-HWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITG 208
H S A R + F P ++SM V L G + ++ V+ +N LE ++ +LI G
Sbjct: 245 HDSRATRGETFYPEYYSMSKVMTGLRAGTLHQGIFNVSPYNYLEGSVQVAAFNKSLLILG 304
Query: 209 IAAQNRAVEGDFVLIKVDRLSLW-AKMKGFSNNSSIVEDSN 248
NRA+ GD V+++V W A + ++ +D N
Sbjct: 305 RDNSNRAIAGDIVVVEVLPKDQWKAPSTKIIDEETVTKDEN 345
>gi|423313194|ref|ZP_17291130.1| ribonuclease R [Bacteroides vulgatus CL09T03C04]
gi|392686408|gb|EIY79714.1| ribonuclease R [Bacteroides vulgatus CL09T03C04]
Length = 715
Score = 249 bits (637), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 177/564 (31%), Positives = 271/564 (48%), Gaps = 85/564 (15%)
Query: 309 NGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVG 368
N P T ++ MN + A+ + + P G V+ I+ER+ D VG
Sbjct: 96 NSFIPDDGGETIFIAERNSAHAMNNDKVKIALFAKRKNRNPEGEVIEILERA--NDTFVG 153
Query: 369 FLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDL--PDSIKK 426
L V +++ + +NR+ L D+ P K
Sbjct: 154 TLKVEKFYAFL------LTENRT------------------------LANDIFIPKDKLK 183
Query: 427 RLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGF 486
+ GD + +I EW EE+ P V+ + G+ GE +++AIL E +
Sbjct: 184 GGKNGDKAV------VKIVEWPEEAKNPIGQVIDILGKAGENTTEMHAILAEFGLPY--V 235
Query: 487 SPESL-SCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVG 545
P+++ + +P E+ + + R+D RN FTIDP A D DDALSI + G+ VG
Sbjct: 236 YPKNVETAAEKIPAEISEADYAEREDFRNVTTFTIDPKDAKDFDDALSIRLIKPGLWEVG 295
Query: 546 VHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIF 605
VHIADV+++V G +D EA+ R+TSVY++ R IPMLP L + SL P ++LAFS+
Sbjct: 296 VHIADVTHYVKEGGVIDKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPDEEKLAFSVI 355
Query: 606 WDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWS 665
+++N G+V D I T+I+S + +YE AQ +I+ GEG
Sbjct: 356 FNMNEKGEVKDSRIVHTIIKSDRRFTYEEAQKVIE----------TGEG----------- 394
Query: 666 DVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEE 725
D I L ++++IL+ +R GA+ + + F DE G P ++ N L EE
Sbjct: 395 DYKEEILELNKLAQILRKQRLVAGAIDFDRVEVKFEIDETGKPLSVYFKESKEANKLIEE 454
Query: 726 FMLLANKTAAEVI--------ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS 777
FMLLAN+T AE I A+ FP R H P+ KL F ++ G ++ TS
Sbjct: 455 FMLLANRTVAEKIGKVPKNKKAKVFP----YRIHDLPDPDKLENLNWFINRFGYKIRTSG 510
Query: 778 SG-QFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPV 836
S + +S+ + + +K+ +++ + R MQ A Y + GHY LAF
Sbjct: 511 SKTEISKSINRLLDDIKNKKEQ-NLVETVSLRAMQKARYSTH-------NIGHYGLAFDY 562
Query: 837 YTHFTSPLRRYPDLVVHRTLNAAL 860
YTHFTSP+RR+PD++VHR L L
Sbjct: 563 YTHFTSPIRRFPDMMVHRLLTRYL 586
>gi|156083040|ref|XP_001609004.1| RNB-like domain containing protein [Babesia bovis T2Bo]
gi|154796254|gb|EDO05436.1| RNB-like domain containing protein [Babesia bovis]
Length = 951
Score = 249 bits (637), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 155/433 (35%), Positives = 231/433 (53%), Gaps = 28/433 (6%)
Query: 435 IEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCL 494
+E + + ID W+ S P H + + G ++E + IL E+ + F P++ L
Sbjct: 426 LENKRIVVVIDSWDRFSRKPSGHWVEIIGDVEDLETESAVILREHEVITREFPPKAYMEL 485
Query: 495 PCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYF 554
P W+ E++ RKD R +F++DP D+DDAL L +G V VHIADV++F
Sbjct: 486 PPADWKPGAEDIKLRKDFRKNLVFSVDPPGCKDIDDALGFSVLDNGNIEVSVHIADVTHF 545
Query: 555 VLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDV 614
V G+ +D EA R T+VY++ R+ MLP LL+ + SL P DRL FS+ W + ++
Sbjct: 546 VKAGSFIDKEASKRCTTVYLVDRRTDMLPSLLTTNLCSLVPNEDRLCFSVVWQFDRNNEI 605
Query: 615 VDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSL 674
VD + +IRS +Y+ AQD+ID S+ + E ++K L
Sbjct: 606 VDTQFYKGIIRSSRAFTYKDAQDLIDAG----GSDNITE----------------ALKGL 645
Query: 675 YEVSKILKDKRFTDGALRLENSKPVFLFD--EYGTPYDSVLSGREDLNFLFEEFMLLANK 732
++KIL+ KRF GA+ LE+ + F ++ + VL D N + EEFMLLAN
Sbjct: 646 DNIAKILRAKRFESGAVELESPEVKFEYELTDVRKMQKYVLY---DTNRMVEEFMLLANV 702
Query: 733 TAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKL 792
+ A I FP SALLRRHP P +L+ + S+HG++ + +S + SL++ +
Sbjct: 703 SVATKIFERFPTSALLRRHPPPVDERLKVLQRSLSQHGIEFEFGNSRDLNLSLKRLVQ-- 760
Query: 793 KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 852
D L L TR M A Y SG+ T + HY L+ +YTHFTSP+RRY D++V
Sbjct: 761 SGDPRLGSALRIMTTRCMSQAVYCHSGE-AGVTSFKHYGLSSELYTHFTSPIRRYADVIV 819
Query: 853 HRTLNAALEAEKL 865
HR L AAL+ E +
Sbjct: 820 HRMLAAALDIEAM 832
>gi|68072245|ref|XP_678036.1| mitotic control protein [Plasmodium berghei strain ANKA]
gi|56498374|emb|CAI00312.1| mitotic control protein dis3 homologue, putative [Plasmodium
berghei]
Length = 1015
Score = 249 bits (636), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 174/533 (32%), Positives = 267/533 (50%), Gaps = 66/533 (12%)
Query: 347 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 406
K+ G+V+ II RS + GG K ++++ + + +
Sbjct: 411 KKLYGKVIGIISRSRKE---------------YGGVIKSCDNDKNNKYIEKLLFFK--AF 453
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 466
+ K P ++ IK +EE + + V ID+W+ S +P L V G
Sbjct: 454 NSKIPHII---------IKSNMEE---ELSNKRVIVTIDKWDFNSKYPLGRCLSVLGVCD 501
Query: 467 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 526
++E + I E I FS + LP W +P+EE R D RN F+IDP
Sbjct: 502 DIEAETKLIYNEYNISTKEFSESAYLSLPPSNWVIPEEEFSKRIDFRNILTFSIDPPGCQ 561
Query: 527 DLDDALSIERLSD-GISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
D+DDALS+E L D I +VGVHIADVSYFV +ALD+EA R T+VY+ +++ MLP L
Sbjct: 562 DIDDALSVEILEDEKIIKVGVHIADVSYFVKQNSALDLEASKRCTTVYLTNQRVDMLPKL 621
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
L+ ++ SL DRL +S + N+ D++D I + +I S +YE AQ+IID
Sbjct: 622 LTTDLCSLVEKQDRLTYSCIFTFNTNYDILDINIAKCIINSDRSFTYEQAQNIID----- 676
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLE-NSKPVFLFDE 704
+S++T S + S++ L ++K LK K++ + AL L+ NS+ VF F++
Sbjct: 677 DSNDT--------------SSIAISLRLLNSIAKDLK-KKWLNDALELKGNSEVVFEFEQ 721
Query: 705 YG-------TPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMR 757
PY + + R L E FMLLAN++ A +I + F + +LRRHP P
Sbjct: 722 KDFTKTKNLKPYITYETNR-----LIEAFMLLANRSVARIIFQNFKAACILRRHPPPKYD 776
Query: 758 KLREFEAFC-SKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYF 816
L+E + + S ++S + S+ LK+D +L +IL T+ M A +
Sbjct: 777 TLKELDEYLQSIKVYDFKFNTSKELSYSINNIN--LKNDKILSNILKTLVTKCMNEAIFI 834
Query: 817 CSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKH 869
+ ++ HY LA +YT FTSP+RRY D++VHR LN EKL+ K+
Sbjct: 835 SGYNVHNNDMLRHYGLAADIYTFFTSPIRRYADIMVHRILNHIYGIEKLHNKY 887
>gi|332663653|ref|YP_004446441.1| ribonuclease R [Haliscomenobacter hydrossis DSM 1100]
gi|332332467|gb|AEE49568.1| ribonuclease R [Haliscomenobacter hydrossis DSM 1100]
Length = 728
Score = 249 bits (636), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 160/461 (34%), Positives = 235/461 (50%), Gaps = 38/461 (8%)
Query: 410 YPKMVVLVKDLPDSIKKRLEEGD--ATIEMELVAARIDEWNE-ESPFPQAHVLHVFGRGG 466
YP+ V+V D P S++ ++ + E V +I+ W + P + +V G+ G
Sbjct: 169 YPRYAVVVVDPPSSLEILVDPSKLMGAKDEERVVVKIESWTTGQHRQPMGVLTYVLGKAG 228
Query: 467 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 526
+ ++ IL N F PE + + E+P+ E+ R+D+R FTIDP A
Sbjct: 229 THDIEMKGILINNGFNLE-FPPEVIKEAEALGTEIPEVEIAIRRDMRKTPTFTIDPENAR 287
Query: 527 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 586
D DDALS L +G VGVHIADV+++V T LD EA RSTSVY++ R PMLP L
Sbjct: 288 DFDDALSFLYLPNGNLEVGVHIADVTHYVHENTTLDKEALARSTSVYLVDRVCPMLPEKL 347
Query: 587 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 646
S E+ SL P D+L FS + ++ +V+RW G+TVI S + SYE AQ ++D
Sbjct: 348 SNELCSLRPNEDKLTFSAVFTFDAHDKIVERWFGKTVIHSDRRFSYEEAQAVLDS----- 402
Query: 647 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYG 706
GEG D + +K L ++ L+ +RF GA+ E+ + F D+ G
Sbjct: 403 -----GEG-----------DFAKELKVLNALAHKLRKERFKKGAINFESEEVRFRLDDNG 446
Query: 707 TPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA-RAFPDSA----LLRRHPAPNMRKLRE 761
P + R+D + L E+FMLLANK A ++ + D A + R H PN K+ E
Sbjct: 447 VPIEVFTKERKDAHMLIEDFMLLANKEVATFVSNKGTQDGAEIPFVYRVHDEPNTDKVEE 506
Query: 762 FEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDF 821
F + G++++ ++ S + L ++ IL A R M A Y S D
Sbjct: 507 LARFARQMGVEMNVTTPKDIANSFNKL-AALAEENEALSILGPIAIRTMAKAEY--SSD- 562
Query: 822 KDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEA 862
+ GHY LAF Y+HFTSP+RRY D++ HR L L+A
Sbjct: 563 ----NIGHYGLAFDFYSHFTSPIRRYSDVLAHRILFDNLKA 599
>gi|336412863|ref|ZP_08593216.1| ribonuclease R [Bacteroides ovatus 3_8_47FAA]
gi|335942909|gb|EGN04751.1| ribonuclease R [Bacteroides ovatus 3_8_47FAA]
Length = 718
Score = 249 bits (636), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 153/435 (35%), Positives = 228/435 (52%), Gaps = 53/435 (12%)
Query: 442 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWE 500
++ EW +++ P V+ + G+ G+ +++AIL E + P+++ + +P E
Sbjct: 196 VKVTEWPDKAKNPIGQVIDILGQAGDNTTEMHAILAEFGLPY--VYPKTVETAADKIPAE 253
Query: 501 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 560
+ EE+ R+D R FTIDP A D DDALSI +L DG+ VGVHIADV+++V G+
Sbjct: 254 ISAEEIAKREDFRKVTTFTIDPKDAKDFDDALSIRKLKDGLWEVGVHIADVTHYVKEGSI 313
Query: 561 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIG 620
+D EA+ R+TSVY++ R IPMLP L + SL P ++LAFS+ +D+ G+V D I
Sbjct: 314 IDKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPNEEKLAFSVIFDITEKGEVRDSRIV 373
Query: 621 RTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKI 680
TVI S + +YE AQ II+ K EG D + +L ++K
Sbjct: 374 HTVINSDRRFTYEEAQQIIETK----------EG-----------DFKEEVLTLDTIAKA 412
Query: 681 LKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVI-- 738
L++KRF+ GA+ + + F DE G P +D N L EEFMLLANKT AE I
Sbjct: 413 LREKRFSAGAINFDRYEVKFEIDEKGKPISVYFKESKDANKLVEEFMLLANKTVAEKIGC 472
Query: 739 ------ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQ 787
A+ P R H P+ KL F ++ G ++ TS S + L+
Sbjct: 473 VPKNKKAKVLP----YRIHDLPDPEKLENLSQFIARFGYKVRTSGTKTDISKSINHLLDD 528
Query: 788 AREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRY 847
K ++ +++ + R MQ A Y + GHY LAF YTHFTSP+RR+
Sbjct: 529 IHGKKEE-----NLIETVSIRAMQKARYSTH-------NIGHYGLAFEYYTHFTSPIRRF 576
Query: 848 PDLVVHRTLNAALEA 862
PD++VHR + ++
Sbjct: 577 PDMMVHRLVTKYMDG 591
>gi|85818501|gb|EAQ39661.1| ribonuclease R [Dokdonia donghaensis MED134]
Length = 734
Score = 249 bits (636), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 167/542 (30%), Positives = 263/542 (48%), Gaps = 56/542 (10%)
Query: 328 NDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAK 387
N +N E + +K+ G + II+R + + VG + + + F
Sbjct: 113 NKALNGDEVEVYIYRQRRSKKHEGEITKIIKR--KTEEFVGVVKLQKKF----------- 159
Query: 388 KNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEW 447
++ + ++ Y + V +K + D+ ++GD V I++W
Sbjct: 160 -----------AFVLTSESNKMYTDIFVPLKKIGDA-----QDGDK------VVVTIEDW 197
Query: 448 NEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELL 507
E++ P + V G+ GE +I++IL + + F E + + +EE+
Sbjct: 198 PEKADSPYGKITKVLGKPGEHNTEIHSILAQYGLPYE-FPKEVEEYANKIDTSIKEEEIA 256
Query: 508 SRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQV 567
R+D+R+ +TIDP A D DDALS ++L +G VGVHIADVS++++PGT LD EA
Sbjct: 257 KRRDMRDVLTYTIDPKDAKDFDDALSFQKLQNGNYEVGVHIADVSHYLVPGTILDDEAYE 316
Query: 568 RSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFS-IFWDLNSAGDVVDRWIGRTVIRS 626
R+TSVY++ R +PMLP +LS SL P ++ FS +F + +V+ W GRTV S
Sbjct: 317 RATSVYLVDRVVPMLPEILSNGACSLRPNEEKYTFSAVFEMVPETSKIVNSWFGRTVTYS 376
Query: 627 CCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSD-VVRSIKSLYEVSKILKDKR 685
+ +YE AQ II+ + SN + ++ +D +V + L ++KI++ +R
Sbjct: 377 DARFAYEEAQAIIESR-----SNIIPAAVSLTGEEYTVTDELVEATLELDRLAKIMRRQR 431
Query: 686 FTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDS 745
DGA+ + + F D+ P +D N L EEFMLLAN+ +E I + P
Sbjct: 432 MKDGAISFDKVEVKFNLDDDANPTGVFFKTSKDANKLIEEFMLLANRKVSEFIGKQRPKK 491
Query: 746 ALLRR-HPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKL--KDDYVLFDIL 802
+ R H PN KL E K G +++ + SL Q + K + + D L
Sbjct: 492 TFVYRIHDEPNDEKLASLEKVVGKFGYKMNLTDRKSVTSSLNQLLVDVQGKKEQNMVDTL 551
Query: 803 INYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEA 862
A R M A Y + GHY LAF Y+HFTSP+RRYPD++VHR L L+
Sbjct: 552 ---AIRTMSKAVYSTE-------NIGHYGLAFEYYSHFTSPIRRYPDVMVHRLLQHYLDG 601
Query: 863 EK 864
K
Sbjct: 602 GK 603
>gi|423129008|ref|ZP_17116683.1| ribonuclease R [Myroides odoratimimus CCUG 12901]
gi|371649850|gb|EHO15326.1| ribonuclease R [Myroides odoratimimus CCUG 12901]
Length = 725
Score = 249 bits (636), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 168/517 (32%), Positives = 258/517 (49%), Gaps = 54/517 (10%)
Query: 347 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 406
K+P G VV I+ER ++ VG + + + F + S DAK
Sbjct: 131 KKPEGEVVEILERHKKQ--FVGVIEIQKNFAFV--STADAKM------------------ 168
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 466
Y + V P +GD +V I++W E++ P V+ V G+ G
Sbjct: 169 ---YTDIFV-----PKEKVGEARDGD------VVVVEIEDWPEKADSPFGKVMKVLGKQG 214
Query: 467 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 526
E +I+AIL E + F E + + +EE+ R+D+R+ FTIDP A
Sbjct: 215 EHNTEIHAILAEYGLTAE-FPKEVDEYANHLDTSITEEEIAKRRDMRDILTFTIDPKDAK 273
Query: 527 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 586
D DDALS +L +G +G+HIADVS++V GT LD EA R+TSVY++ R +PMLP +L
Sbjct: 274 DFDDALSFRQLENGFYEIGIHIADVSHYVKEGTILDEEAYNRATSVYLVDRTVPMLPEVL 333
Query: 587 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 646
S SL P D+ FS ++L+ ++ ++W GRTV S +++YE AQ IID K V
Sbjct: 334 SNFACSLRPNEDKYTFSAVFELDDKAEIRNKWFGRTVTHSDQRMAYEEAQYIIDSKDRVI 393
Query: 647 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYG 706
++ G Q + +V ++ L E++ I++ R +DGA+ + + F +E
Sbjct: 394 PADISLTGEDQEVSE----EVADAVLKLNELAMIMRKNRMSDGAISFDKVEVKFNLNEAA 449
Query: 707 TPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFC 766
P ++ N L EEFMLLAN+ +E I + + + R H P+ KL +
Sbjct: 450 EPVGVFFKQSKEANHLIEEFMLLANRKVSEFIGKQ-KKTFVYRIHDEPDQEKLFGLQTVI 508
Query: 767 SKHGLQLDTSSSGQFHQSLEQAREKL--KDDYVLFDILINYATRPMQLASYFCSGDFKDD 824
++ G ++ S +S+ + + + K + L D L A R M ASY +
Sbjct: 509 ARFGHNINFKSKSSISKSINKLLKDVEGKKEQNLVDTL---AIRCMSKASYSTN------ 559
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 861
+ GHY LAF Y+HFTSP+RRYPD++ HR L L+
Sbjct: 560 -NIGHYGLAFDYYSHFTSPIRRYPDVMAHRLLQHYLD 595
>gi|361124483|gb|EHK96571.1| putative protein SSD1 [Glarea lozoyensis 74030]
Length = 1301
Score = 249 bits (636), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 198/735 (26%), Positives = 342/735 (46%), Gaps = 83/735 (11%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEG--VQTDVLITGIAAQN 213
R +F P+ + L G + RVN NR +AY + + D+ I G +N
Sbjct: 350 RKTLFTPYLPQATLPALLGDGQLVSGILRVNKKNRSDAYVSTQDGLLDADIFICGSKDRN 409
Query: 214 RAVEGDFVLIKV-DRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYE 272
RA+EGD V +++ D +W + + + ++ ++G ++D + + +
Sbjct: 410 RALEGDLVAVELLDVDEVWGQKREKEEKKKRKDITDTRGGSSGGNADTSHRDNSTNGDRQ 469
Query: 273 YSNCTLLSEKGIHHDDDSSSEAYNQEM---IEREGYNYINGHHPSTSDSTEKVSSSQQND 329
N E G S + Q+ +E EG + + +D + + +
Sbjct: 470 THN-----ENGTMRRRGSLRQRPTQKKNDDVEVEGQSLLLVEEEEVNDEQKPLYAGHI-- 522
Query: 330 GMNAIERLSAMISSYPTK--RPTGRVVSIIERSPR--RDGIVGFLNVNQWFNYKGGSRKD 385
+ +ER++ + S RP+ + + + R RDG G R+
Sbjct: 523 -VAVVERVAGQMFSGTLGLLRPSSQATKEKQEAERQARDG--------------GNGRQH 567
Query: 386 AKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLP-DSIKKRLEEGDATIEMELVAARI 444
++ + + + PT + P + + + P D ++K ++ D + A I
Sbjct: 568 EQRQQDKPKI-----VWFKPTDKRVPLIAIPTEQAPRDFVEKHMDYAD-----RIFVACI 617
Query: 445 DEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQE 504
W S P ++ G+ GE++ + +A+L +N FS + W + +E
Sbjct: 618 KRWPITSLHPFGTLVEQLGKMGELKVETDALLRDNNFASDEFSDAVTRSVGLDDWSLAKE 677
Query: 505 E---LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTAL 561
+ + +R+D R+ FTIDP+ A +LDDA+ ++ DG +G+HIADV++F+ + +
Sbjct: 678 DETAISARRDFRDEKTFTIDPNGAKELDDAIHVKSEGDGKIEIGIHIADVAHFIKANSLV 737
Query: 562 DIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV---DRW 618
D EA+ RST+V+++ R+ MLP ++ E+ SL PG +RL S+ + +N+ VV D W
Sbjct: 738 DREAKKRSTAVFLMNRESAMLPPKIATEICSLTPGEERLTVSVVFKVNAHTGVVSDEDTW 797
Query: 619 IGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVS 678
+G+++I+S KLSY+ ++ G D+ +L G E D I+ L+ V+
Sbjct: 798 VGKSIIKSSGKLSYKDVDAVLTGHVDI-----------KLPG-VEAKD----IQILHAVA 841
Query: 679 KILKDKRF-TDG----ALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKT 733
+ +++R TDG LRL ++ D+ P + + + L EE M AN
Sbjct: 842 QKFREQRLGTDGETIAPLRL-----IYQLDDENVPVEHNIFDSTPSHELIEELMHKANAY 896
Query: 734 AAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLK 793
A+ I P+ A LRR PN R+L+ F +K G ++DT+SSG SL +
Sbjct: 897 VAQKIYEGMPEKAFLRRQGPPNPRRLQTFSDRMNKIGFEIDTTSSGSLQNSLFKV----- 951
Query: 794 DDYVLFDILINYATRPMQLASYFCSGDFKDDTD-WGHYALAFPVYTHFTSPLRRYPDLVV 852
DD + + + M A Y+ +G K T + HYAL P+YTHFT+P RRY DLVV
Sbjct: 952 DDTNIRKGMETLLVKTMHRAKYYIAG--KTPTHLYPHYALNLPLYTHFTNPSRRYADLVV 1009
Query: 853 HRTLNAALEAEKLYW 867
HR L A L K+ +
Sbjct: 1010 HRQLEAVLSEGKIEY 1024
>gi|240281814|gb|EER45317.1| mitotic control protein dis3 [Ajellomyces capsulatus H143]
Length = 1037
Score = 249 bits (636), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 193/563 (34%), Positives = 274/563 (48%), Gaps = 68/563 (12%)
Query: 317 DSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWF 376
D E V S ++ + R + +S +PT RVV I++R+ W
Sbjct: 349 DEKEVVVSEKERRALQEEVRRAHGKTSEGRPQPTARVVGIVKRN--------------WR 394
Query: 377 NYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIE 436
Y G K + ++ S ++ + + P + PK+ + + D +R
Sbjct: 395 QYVGNIDKISTASQVQ-SSRRQQTVFVIPMDKRIPKIRIRTRQAQDLFGQR--------- 444
Query: 437 MELVAARIDEWNEESPFPQAHVLHVFG----RGGEVEPQINAILYENAICCSGFSPESLS 492
+ +D WN +S +P H + G +G E E A+L E + F L
Sbjct: 445 ---ILVTVDAWNRDSRYPTGHFVRSLGELETKGAETE----ALLLEYDVQYRPFPQVVLD 497
Query: 493 CLPCVP--WEVPQE----ELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGV 546
CLP W+VPQ RKDLR+ + +IDP D+DDAL L +G VGV
Sbjct: 498 CLPPEGHNWKVPQNMDDPGWRDRKDLRDLLVCSIDPPGCQDIDDALHARPLPNGNFEVGV 557
Query: 547 HIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFW 606
HIADVS+FV P T +D EA +R T+VY++ ++I MLP+LL ++ SL P V R AFS W
Sbjct: 558 HIADVSHFVKPNTPMDTEASMRGTTVYLVDKRIDMLPMLLGTDLCSLKPHVQRYAFSTIW 617
Query: 607 DLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSD 666
++ + +VV ++VI S SYE AQ ID K + +
Sbjct: 618 EMTPSAEVVSSICTKSVILSREAFSYEQAQLRIDDKSKTD-------------------E 658
Query: 667 VVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLS-GREDLNFLFE 724
+ S++ L ++SK+LK KR GAL L + + D E P V + D N L E
Sbjct: 659 LTESMRLLLKLSKLLKQKRMDAGALNLASPEVRIETDSELSDPVADVKTKALLDTNSLVE 718
Query: 725 EFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCS-KHGLQLDTSSSGQFHQ 783
EFML AN T A I ++FP +ALLRRH P E A S K + LD SSS +
Sbjct: 719 EFMLHANTTVASKIFKSFPQTALLRRHATPPPSNFEELIAQLSKKRNMTLDVSSSLALAR 778
Query: 784 SLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTS 842
SL++ + F+ L+ ATR M A YFC+G ++++ HY LA +YTHFTS
Sbjct: 779 SLDRCVDPANP---FFNTLVRILATRCMTSAEYFCAGAHA-ESEFRHYGLASSIYTHFTS 834
Query: 843 PLRRYPDLVVHRTLNAALEAEKL 865
P+RRY DLVVHR L AA+ E L
Sbjct: 835 PIRRYADLVVHRQLAAAIGYEGL 857
Score = 45.1 bits (105), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 151 HQSEA-RCKIFAP-HWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITG 208
H S A R + F P ++SM V L G + ++ V+ +N LE ++ +LI G
Sbjct: 245 HDSRATRGETFYPEYYSMSKVMTGLRAGTLHQGIFNVSPYNYLEGSVQVAAFDKSLLILG 304
Query: 209 IAAQNRAVEGDFVLIKVDRLSLW-AKMKGFSNNSSIVEDSN 248
NRA+ GD V+++V W A + ++ +D N
Sbjct: 305 RDNSNRAIAGDIVVVEVLPKDQWKAPSTKIIDEETVTKDEN 345
>gi|423132666|ref|ZP_17120313.1| ribonuclease R [Myroides odoratimimus CIP 101113]
gi|371650043|gb|EHO15517.1| ribonuclease R [Myroides odoratimimus CIP 101113]
Length = 725
Score = 249 bits (636), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 168/517 (32%), Positives = 258/517 (49%), Gaps = 54/517 (10%)
Query: 347 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 406
K+P G VV I+ER ++ VG + + + F + S DAK
Sbjct: 131 KKPEGEVVEILERHKKQ--FVGVIEIQKNFAFV--STADAKM------------------ 168
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 466
Y + V P +GD +V I++W E++ P V+ V G+ G
Sbjct: 169 ---YTDIFV-----PKEKVGEARDGD------VVVVEIEDWPEKADSPFGKVMKVLGKQG 214
Query: 467 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 526
E +I+AIL E + F E + + +EE+ R+D+R+ FTIDP A
Sbjct: 215 EHNTEIHAILAEYGLTAE-FPKEVDEYANHLDTSITEEEIAKRRDMRDILTFTIDPKDAK 273
Query: 527 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 586
D DDALS +L +G +G+HIADVS++V GT LD EA R+TSVY++ R +PMLP +L
Sbjct: 274 DFDDALSFRQLENGFYEIGIHIADVSHYVKEGTILDEEAYNRATSVYLVDRTVPMLPEVL 333
Query: 587 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 646
S SL P D+ FS ++L+ ++ ++W GRTV S +++YE AQ IID K V
Sbjct: 334 SNFACSLRPNEDKYTFSAVFELDDKAEIRNKWFGRTVTHSDQRMAYEEAQYIIDSKDRVI 393
Query: 647 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYG 706
++ G Q + +V ++ L E++ I++ R +DGA+ + + F +E
Sbjct: 394 PADISLTGENQEISE----EVADAVLKLNELAMIMRKNRMSDGAISFDKVEVKFNLNEAA 449
Query: 707 TPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFC 766
P ++ N L EEFMLLAN+ +E I + + + R H P+ KL +
Sbjct: 450 EPVGVFFKQSKEANHLIEEFMLLANRKVSEFIGKQ-KKTFVYRIHDEPDQEKLFGLQTVI 508
Query: 767 SKHGLQLDTSSSGQFHQSLEQAREKL--KDDYVLFDILINYATRPMQLASYFCSGDFKDD 824
++ G ++ S +S+ + + + K + L D L A R M ASY +
Sbjct: 509 ARFGHNINFKSKSSISKSINKLLKDVEGKKEQNLVDTL---AIRCMSKASYSTN------ 559
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 861
+ GHY LAF Y+HFTSP+RRYPD++ HR L L+
Sbjct: 560 -NIGHYGLAFDYYSHFTSPIRRYPDVMAHRLLQHYLD 595
>gi|293373757|ref|ZP_06620103.1| ribonuclease R [Bacteroides ovatus SD CMC 3f]
gi|292631247|gb|EFF49879.1| ribonuclease R [Bacteroides ovatus SD CMC 3f]
Length = 718
Score = 249 bits (636), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 153/435 (35%), Positives = 228/435 (52%), Gaps = 53/435 (12%)
Query: 442 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWE 500
++ EW +++ P V+ + G+ G+ +++AIL E + P+++ + +P E
Sbjct: 196 VKVTEWPDKAKNPIGQVIDILGQAGDNTTEMHAILAEFGLPY--VYPKAVETAADKIPAE 253
Query: 501 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 560
+ EE+ R+D R FTIDP A D DDALSI +L DG+ VGVHIADV+++V G+
Sbjct: 254 ISAEEIAKREDFRKVTTFTIDPKDAKDFDDALSIRKLKDGLWEVGVHIADVTHYVKEGSI 313
Query: 561 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIG 620
+D EA+ R+TSVY++ R IPMLP L + SL P ++LAFS+ +D+ G+V D I
Sbjct: 314 IDKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPNEEKLAFSVIFDITEKGEVRDSRIV 373
Query: 621 RTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKI 680
TVI S + +YE AQ II+ K EG D + +L ++K
Sbjct: 374 HTVINSDRRFTYEEAQQIIETK----------EG-----------DFKEEVLTLDTIAKA 412
Query: 681 LKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVI-- 738
L++KRF+ GA+ + + F DE G P +D N L EEFMLLANKT AE I
Sbjct: 413 LREKRFSAGAINFDRYEVKFEIDEKGKPISVYFKESKDANKLVEEFMLLANKTVAEKIGC 472
Query: 739 ------ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQ 787
A+ P R H P+ KL F ++ G ++ TS S + L+
Sbjct: 473 VPKNKKAKVLP----YRIHDLPDPEKLENLSQFIARFGYKVRTSGTKTDISKSINHLLDD 528
Query: 788 AREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRY 847
K ++ +++ + R MQ A Y + GHY LAF YTHFTSP+RR+
Sbjct: 529 IHGKKEE-----NLIETVSIRAMQKARYSTH-------NIGHYGLAFEYYTHFTSPIRRF 576
Query: 848 PDLVVHRTLNAALEA 862
PD++VHR + ++
Sbjct: 577 PDMMVHRLVTKYMDG 591
>gi|228470878|ref|ZP_04055723.1| ribonuclease R [Porphyromonas uenonis 60-3]
gi|228307275|gb|EEK16289.1| ribonuclease R [Porphyromonas uenonis 60-3]
Length = 725
Score = 249 bits (636), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 161/432 (37%), Positives = 228/432 (52%), Gaps = 54/432 (12%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 499
V I +W P VL V G+ G+ + ++ AIL E I + ++ +
Sbjct: 202 VEVAITDWPSSDKIPTGRVLKVLGKAGDNDTEMRAILTEYNIDYD-YPQAAIDEAERLSG 260
Query: 500 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 559
E+ QE+L R+D R TIDP+ A D DDALS L DG VGVHIADVSYFV G+
Sbjct: 261 EITQEQLAQREDFREVPTLTIDPADAKDFDDALSYRDLGDGRHEVGVHIADVSYFVTEGS 320
Query: 560 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 619
+D EA R TSVY++ R IPMLP +L + SL P D+ A+S L++A V I
Sbjct: 321 KIDEEAYARGTSVYLVDRTIPMLPEVLCNNLCSLRPNEDKYAYSCILTLDNAAHVQQYRI 380
Query: 620 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 679
RTVIRS +++YE AQD+I+G+ D + + I+ L+E+S+
Sbjct: 381 CRTVIRSDQRMTYEEAQDVIEGRSDTQQA---------------------IIQPLFELSQ 419
Query: 680 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDL-----NFLFEEFMLLANKTA 734
L+ +RF DGA++ ++ + F D G P +G E++ + L EEFMLLAN+T
Sbjct: 420 QLRKRRFDDGAIKFQSQEVRFTLDPKGRP-----TGVEEVVDNESHHLIEEFMLLANRTV 474
Query: 735 AEVIA--RAFPDSA---LLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQS 784
AE I RA A + R H P+ KL +F K G +++ S S F++
Sbjct: 475 AEDIGQVRAKGKKAKNFVYRVHAQPSEEKLMALASFAGKFGYKVNLSGENRQVSRSFNKL 534
Query: 785 LEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPL 844
L+ + K ++ +++ A R M A Y S D + GHY L+F YTHFTSP+
Sbjct: 535 LDSVQGKREE-----NLIETLAIRSMTRAEY--SPD-----NIGHYGLSFAFYTHFTSPI 582
Query: 845 RRYPDLVVHRTL 856
RRYPDL+VHR L
Sbjct: 583 RRYPDLMVHRLL 594
>gi|160884747|ref|ZP_02065750.1| hypothetical protein BACOVA_02736 [Bacteroides ovatus ATCC 8483]
gi|237721941|ref|ZP_04552422.1| ribonuclease R [Bacteroides sp. 2_2_4]
gi|423291213|ref|ZP_17270061.1| ribonuclease R [Bacteroides ovatus CL02T12C04]
gi|423293671|ref|ZP_17271798.1| ribonuclease R [Bacteroides ovatus CL03T12C18]
gi|156109782|gb|EDO11527.1| ribonuclease R [Bacteroides ovatus ATCC 8483]
gi|229448810|gb|EEO54601.1| ribonuclease R [Bacteroides sp. 2_2_4]
gi|392663824|gb|EIY57369.1| ribonuclease R [Bacteroides ovatus CL02T12C04]
gi|392677629|gb|EIY71045.1| ribonuclease R [Bacteroides ovatus CL03T12C18]
Length = 718
Score = 249 bits (636), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 153/435 (35%), Positives = 228/435 (52%), Gaps = 53/435 (12%)
Query: 442 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWE 500
++ EW +++ P V+ + G+ G+ +++AIL E + P+++ + +P E
Sbjct: 196 VKVTEWPDKAKNPIGQVIDILGQAGDNTTEMHAILAEFGLPY--VYPKAVETAADKIPAE 253
Query: 501 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 560
+ EE+ R+D R FTIDP A D DDALSI +L DG+ VGVHIADV+++V G+
Sbjct: 254 ISAEEIAKREDFRKVTTFTIDPKDAKDFDDALSIRKLKDGLWEVGVHIADVTHYVKEGSI 313
Query: 561 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIG 620
+D EA+ R+TSVY++ R IPMLP L + SL P ++LAFS+ +D+ G+V D I
Sbjct: 314 IDKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPNEEKLAFSVIFDITEKGEVRDSRIV 373
Query: 621 RTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKI 680
TVI S + +YE AQ II+ K EG D + +L ++K
Sbjct: 374 HTVINSDRRFTYEEAQQIIETK----------EG-----------DFKEEVLTLDTIAKA 412
Query: 681 LKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVI-- 738
L++KRF+ GA+ + + F DE G P +D N L EEFMLLANKT AE I
Sbjct: 413 LREKRFSAGAINFDRYEVKFEIDEKGKPISVYFKESKDANKLVEEFMLLANKTVAEKIGC 472
Query: 739 ------ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQ 787
A+ P R H P+ KL F ++ G ++ TS S + L+
Sbjct: 473 VPKNKKAKVLP----YRIHDLPDPEKLENLSQFIARFGYKVRTSGTKTDISKSINHLLDD 528
Query: 788 AREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRY 847
K ++ +++ + R MQ A Y + GHY LAF YTHFTSP+RR+
Sbjct: 529 IHGKKEE-----NLIETVSIRAMQKARYSTH-------NIGHYGLAFEYYTHFTSPIRRF 576
Query: 848 PDLVVHRTLNAALEA 862
PD++VHR + ++
Sbjct: 577 PDMMVHRLVTKYMDG 591
>gi|423328277|ref|ZP_17306084.1| ribonuclease R [Myroides odoratimimus CCUG 3837]
gi|404605180|gb|EKB04793.1| ribonuclease R [Myroides odoratimimus CCUG 3837]
Length = 725
Score = 249 bits (636), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 168/517 (32%), Positives = 258/517 (49%), Gaps = 54/517 (10%)
Query: 347 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 406
K+P G VV I+ER ++ VG + + + F + S DAK
Sbjct: 131 KKPEGEVVEILERHKKQ--FVGVIEIQKNFAFV--STADAKM------------------ 168
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 466
Y + V P +GD +V I++W E++ P V+ V G+ G
Sbjct: 169 ---YTDIFV-----PKEKVGEARDGD------VVVVEIEDWPEKADSPFGKVMKVLGKQG 214
Query: 467 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 526
E +I+AIL E + F E + + +EE+ R+D+R+ FTIDP A
Sbjct: 215 EHNTEIHAILAEYGLTAE-FPKEVDEYANHLDTSITEEEIAKRRDMRDILTFTIDPKDAK 273
Query: 527 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 586
D DDALS +L +G +G+HIADVS++V GT LD EA R+TSVY++ R +PMLP +L
Sbjct: 274 DFDDALSFRQLENGFYEIGIHIADVSHYVKEGTILDEEAYNRATSVYLVDRTVPMLPEVL 333
Query: 587 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 646
S SL P D+ FS ++L+ ++ ++W GRTV S +++YE AQ IID K V
Sbjct: 334 SNFACSLRPNEDKYTFSAVFELDDKAEIRNKWFGRTVTHSDQRMAYEEAQYIIDSKDRVI 393
Query: 647 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYG 706
++ G Q + +V ++ L E++ I++ R +DGA+ + + F +E
Sbjct: 394 PADISLTGENQEISE----EVADAVLKLNELAMIMRKNRMSDGAISFDKVEVKFNLNEAA 449
Query: 707 TPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFC 766
P ++ N L EEFMLLAN+ +E I + + + R H P+ KL +
Sbjct: 450 EPVGVFFKQSKEANHLIEEFMLLANRKVSEFIGKQ-KKTFVYRIHDEPDQEKLFGLQTVI 508
Query: 767 SKHGLQLDTSSSGQFHQSLEQAREKL--KDDYVLFDILINYATRPMQLASYFCSGDFKDD 824
++ G ++ S +S+ + + + K + L D L A R M ASY +
Sbjct: 509 ARFGHNINFKSKSSISKSINKLLKDVEGKKEQNLVDTL---AIRCMSKASYSTN------ 559
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 861
+ GHY LAF Y+HFTSP+RRYPD++ HR L L+
Sbjct: 560 -NIGHYGLAFDYYSHFTSPIRRYPDVMAHRLLQHYLD 595
>gi|299144985|ref|ZP_07038053.1| ribonuclease R [Bacteroides sp. 3_1_23]
gi|298515476|gb|EFI39357.1| ribonuclease R [Bacteroides sp. 3_1_23]
Length = 718
Score = 249 bits (636), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 153/435 (35%), Positives = 228/435 (52%), Gaps = 53/435 (12%)
Query: 442 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWE 500
++ EW +++ P V+ + G+ G+ +++AIL E + P+++ + +P E
Sbjct: 196 VKVTEWPDKAKNPIGQVIDILGQAGDNTTEMHAILAEFGLPY--VYPKAVETAADKIPAE 253
Query: 501 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 560
+ EE+ R+D R FTIDP A D DDALSI +L DG+ VGVHIADV+++V G+
Sbjct: 254 ISAEEIAKREDFRKVTTFTIDPKDAKDFDDALSIRKLKDGLWEVGVHIADVTHYVKEGSI 313
Query: 561 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIG 620
+D EA+ R+TSVY++ R IPMLP L + SL P ++LAFS+ +D+ G+V D I
Sbjct: 314 IDKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPNEEKLAFSVIFDITEKGEVRDSRIV 373
Query: 621 RTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKI 680
TVI S + +YE AQ II+ K EG D + +L ++K
Sbjct: 374 HTVINSDRRFTYEEAQQIIETK----------EG-----------DFKEEVLTLDTIAKA 412
Query: 681 LKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVI-- 738
L++KRF+ GA+ + + F DE G P +D N L EEFMLLANKT AE I
Sbjct: 413 LREKRFSAGAINFDRYEVKFEIDEKGKPISVYFKESKDANKLVEEFMLLANKTVAEKIGC 472
Query: 739 ------ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQ 787
A+ P R H P+ KL F ++ G ++ TS S + L+
Sbjct: 473 VPKNKKAKVLP----YRIHDLPDPEKLENLSQFIARFGYKVRTSGTKTDISKSINHLLDD 528
Query: 788 AREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRY 847
K ++ +++ + R MQ A Y + GHY LAF YTHFTSP+RR+
Sbjct: 529 IHGKKEE-----NLIETVSIRAMQKARYSTH-------NIGHYGLAFEYYTHFTSPIRRF 576
Query: 848 PDLVVHRTLNAALEA 862
PD++VHR + ++
Sbjct: 577 PDMMVHRLVTKYMDG 591
>gi|78188726|ref|YP_379064.1| ribonuclease R [Chlorobium chlorochromatii CaD3]
gi|78170925|gb|ABB28021.1| RNAse R [Chlorobium chlorochromatii CaD3]
Length = 794
Score = 249 bits (636), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 173/483 (35%), Positives = 250/483 (51%), Gaps = 56/483 (11%)
Query: 401 IQLTPTHPK-YPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVL 459
QL P K P++ V +K ++ ++G + EL ++ E N V+
Sbjct: 227 FQLKPDDRKILPEIFVALKH-----ARKAKDGQKVLVGELDFTQLGEIN-------GKVV 274
Query: 460 HVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFT 519
+ G G+ +++AI I + F L + V + + ++ R D+R+ +FT
Sbjct: 275 EILGTAGDSAVEVSAIARSKGIDET-FDDALLQQVQSVSDTISEADIKDRLDIRDKVVFT 333
Query: 520 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 579
IDP A D DDALS+E L DG+ RVGVHIADVS++V + LD EAQ R+TSVY++ R I
Sbjct: 334 IDPIDAKDFDDALSVEMLEDGLCRVGVHIADVSHYVQENSPLDREAQKRATSVYLVDRVI 393
Query: 580 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDII 639
PMLP LSE++ SLNPGVDR+A+SIF+ L +V + +TVI S + +YE
Sbjct: 394 PMLPARLSEQICSLNPGVDRMAYSIFFTLTPEAEVRNYEFHKTVIHSKRRFTYE------ 447
Query: 640 DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPV 699
DVE GEG D ++ ++ L S IL++KRF DG L E +
Sbjct: 448 ----DVEEILHKGEG-----------DYLQELQLLDRYSTILREKRFRDGGLDFETEEVR 492
Query: 700 FLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAF------PDSALLRRHPA 753
F + G P + + R + L EEFMLLAN+ A+ + + F P L R H +
Sbjct: 493 FKLGKEGEPLEVIKKERLGSHRLIEEFMLLANRKVAKHLTKTFRENRKTPLPVLYRVHGS 552
Query: 754 PNMRKLREFEAFCSKHG--LQLDTSSSGQF--HQSLEQAREKLKDDYVLFDILINYATRP 809
P K+ F + G L+++ S G QSL Q +++K V F ++ R
Sbjct: 553 PQEEKVVMVANFVKRLGYDLKINRSKEGIIVSAQSLRQLLQQVKGTNVEF-LVSELVLRC 611
Query: 810 MQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKH 869
M A Y +GD + GHY L F YTHFTSP+RRYPDL++HR L E E++ K
Sbjct: 612 MSKAVY--TGD-----NIGHYGLGFEHYTHFTSPIRRYPDLLIHRML---FEYERMRKKR 661
Query: 870 RRM 872
R+M
Sbjct: 662 RKM 664
>gi|225558893|gb|EEH07176.1| mitotic control protein dis3 [Ajellomyces capsulatus G186AR]
Length = 1037
Score = 249 bits (636), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 193/563 (34%), Positives = 274/563 (48%), Gaps = 68/563 (12%)
Query: 317 DSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWF 376
D E V S ++ + R + +S +PT RVV I++R+ W
Sbjct: 349 DEKEVVVSEKERRALQEEVRRAHGKTSEGRPQPTARVVGIVKRN--------------WR 394
Query: 377 NYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIE 436
Y G K + ++ S ++ + + P + PK+ + + D +R
Sbjct: 395 QYVGNIDKISTASQVQ-SSRRQQTVFVIPMDKRIPKIRIRTRQAQDLFGQR--------- 444
Query: 437 MELVAARIDEWNEESPFPQAHVLHVFG----RGGEVEPQINAILYENAICCSGFSPESLS 492
+ +D WN +S +P H + G +G E E A+L E + F L
Sbjct: 445 ---ILVTVDAWNRDSRYPTGHFVRSLGELETKGAETE----ALLLEYDVQYRPFPQVVLD 497
Query: 493 CLPCVP--WEVPQE----ELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGV 546
CLP W+VPQ RKDLR+ + +IDP D+DDAL L +G VGV
Sbjct: 498 CLPPEGHNWKVPQNMDDPGWRDRKDLRDLLVCSIDPPGCQDIDDALHARPLPNGNFEVGV 557
Query: 547 HIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFW 606
HIADVS+FV P T +D EA +R T+VY++ ++I MLP+LL ++ SL P V R AFS W
Sbjct: 558 HIADVSHFVKPNTPMDTEASMRGTTVYLVDKRIDMLPMLLGTDLCSLKPHVQRYAFSTIW 617
Query: 607 DLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSD 666
++ + +VV ++VI S SYE AQ ID K + +
Sbjct: 618 EMTPSAEVVSSICTKSVILSREAFSYEQAQLRIDDKSKTD-------------------E 658
Query: 667 VVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLS-GREDLNFLFE 724
+ S++ L ++SK+LK KR GAL L + + D E P V + D N L E
Sbjct: 659 LTESMRLLLKLSKLLKQKRMDAGALNLASPEVRIETDSELSDPVADVKTKALLDTNSLVE 718
Query: 725 EFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCS-KHGLQLDTSSSGQFHQ 783
EFML AN T A I ++FP +ALLRRH P E A S K + LD SSS +
Sbjct: 719 EFMLHANTTVASKIFKSFPQTALLRRHATPPPSNFEELIAQLSKKRNMTLDVSSSLALAR 778
Query: 784 SLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTS 842
SL++ + F+ L+ ATR M A YFC+G ++++ HY LA +YTHFTS
Sbjct: 779 SLDRCVDPANP---FFNTLVRILATRCMTSAEYFCAGAHA-ESEFRHYGLASSIYTHFTS 834
Query: 843 PLRRYPDLVVHRTLNAALEAEKL 865
P+RRY DLVVHR L AA+ E L
Sbjct: 835 PIRRYADLVVHRQLAAAIGYEGL 857
Score = 43.9 bits (102), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Query: 156 RCKIFAP-HWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNR 214
R + F P ++SM V L G + ++ V+ +N LE ++ +LI G NR
Sbjct: 251 RGETFYPEYYSMSKVMTGLRAGTLHQGIFNVSPYNYLEGSVQVAAFDKSLLILGRDNSNR 310
Query: 215 AVEGDFVLIKVDRLSLW-AKMKGFSNNSSIVEDSN 248
A+ GD V+++V W A + ++ +D N
Sbjct: 311 AIAGDIVVVEVLPKDQWKAPSTKIIDEETVTKDEN 345
>gi|328872026|gb|EGG20396.1| Putative mitotic control protein [Dictyostelium fasciculatum]
Length = 1261
Score = 249 bits (636), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 164/505 (32%), Positives = 250/505 (49%), Gaps = 48/505 (9%)
Query: 366 IVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIK 425
+VG N W +Y G S S ++ + P + P + V K +
Sbjct: 438 VVGIFQRN-WRDYVG--------TIESGSTVYSNFVNVVPLDSRIPIIRVATKSAEAFVN 488
Query: 426 KRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSG 485
KR + RID W+ S +P H + G G +E ++ ++ E+ I
Sbjct: 489 KR------------IIVRIDRWDLSSSYPAGHYVSSVGERGSLETELGCLMVEHDISLRP 536
Query: 486 FSPESLSCLPCV-PWEVPQEELLSRKDLRN--FCIFTIDPSTATDLDDALSIERL-SDGI 541
+S + L LP W +P++E R+ + + + +IDP + D+DD +S+ RL D +
Sbjct: 537 WSKQILDSLPTSDTWSIPKDERKKRRIMADSGHRVMSIDPLGSKDIDDTISLARLDGDRV 596
Query: 542 SRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLA 601
+GVHIADV++FV G+ LDIEAQ R T++Y+ R+ MLP +LSE++ SL G +R A
Sbjct: 597 IEIGVHIADVTHFVAKGSPLDIEAQRRGTTIYLPDRRFDMLPAVLSEDLCSLWGGKERCA 656
Query: 602 FSIFWDL-----NSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWP 656
S+ W + +VD W G+T+I SC + Y+ AQDIIDGK
Sbjct: 657 MSVVWRMELDATTQEYKIVDSWFGKTIINSCGEFHYQLAQDIIDGKV------------- 703
Query: 657 QLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDE-YGTPYDSVLSG 715
+ G+ DV K+ +++ ++R GAL LE+ + F F+E TP VL
Sbjct: 704 -VDGKDRDEDVTNGGKNAGYRNRLHNNRRELAGALDLESIEVRFTFNESTKTPDRIVLKS 762
Query: 716 REDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDT 775
+++ L E+M+LAN I + P +ALLRRHP PN + G D+
Sbjct: 763 DLEVHSLVAEYMILANAAVGTRIHQYHPGAALLRRHPPPNQLGFSNIQQLFDMFGFPFDS 822
Query: 776 SSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFP 835
SS+ + +SL+ A + D + I+ + A YF +G F D D+ HY LA
Sbjct: 823 SSNSRLAESLKNA--VVPGDPLANQIIKLKTVNVVSEAVYFSTGGFNVD-DFYHYGLALN 879
Query: 836 VYTHFTSPLRRYPDLVVHRTLNAAL 860
YTHFTSP+RRY D++VHR L A+
Sbjct: 880 KYTHFTSPIRRYADIIVHRQLMDAV 904
>gi|375254472|ref|YP_005013639.1| ribonuclease R [Tannerella forsythia ATCC 43037]
gi|363406269|gb|AEW19955.1| ribonuclease R [Tannerella forsythia ATCC 43037]
Length = 732
Score = 249 bits (636), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 143/424 (33%), Positives = 228/424 (53%), Gaps = 45/424 (10%)
Query: 443 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLS-CLPCVPWEV 501
RI EW E + P V+ + G+ G+ +++AIL E + + PE + +P E+
Sbjct: 212 RIIEWPEGAKNPLGEVIDILGKAGDNNTEMHAILAEFGLPYT--YPEKVEEAANRIPTEI 269
Query: 502 PQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTAL 561
E+ R+D R FTIDP A D DDALS+ +L +G+ VGVHIADV+++V PG+ +
Sbjct: 270 TDEDRAGREDFRGVVTFTIDPKDAKDFDDALSLRKLENGLWEVGVHIADVTHYVKPGSII 329
Query: 562 DIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGR 621
D EA R+TSVY++ R IPMLP L + SL P ++L FS+ +++N +++ IGR
Sbjct: 330 DKEAYERATSVYLVDRTIPMLPESLCNNLCSLRPNEEKLTFSVIFEMNDEAEILASRIGR 389
Query: 622 TVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKIL 681
T+I S + +YE AQ++I+ GQ ++ D + +L+ +++ L
Sbjct: 390 TIIESDRRFTYEEAQNVIET------------------GQGDYKD---EVLTLHHLAQQL 428
Query: 682 KDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR- 740
++ RF G++ + + F DE G P + ++ N L EEFML+AN+ AE + +
Sbjct: 429 RNIRFASGSIDFDRYEVKFEIDEKGKPLNVYFKESKEANKLIEEFMLIANRAVAESMGKQ 488
Query: 741 ---AFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQ-----FHQSLEQAREKL 792
+ + R H P+ K++ F F + G +L T S + L++A+ K
Sbjct: 489 PKGKTKKTFVYRVHEQPDPEKMKNFAGFIRRFGYKLKTDGSKSELTKGINNLLDKAQGKP 548
Query: 793 KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 852
++ +++ A R MQ A Y + GHY LAFP Y+HFTSP+RRYPD++
Sbjct: 549 EE-----NLIETLAIRSMQKARYSTE-------NIGHYGLAFPYYSHFTSPIRRYPDMMA 596
Query: 853 HRTL 856
HR L
Sbjct: 597 HRLL 600
>gi|298482589|ref|ZP_07000774.1| ribonuclease R [Bacteroides sp. D22]
gi|336405445|ref|ZP_08586124.1| ribonuclease R [Bacteroides sp. 1_1_30]
gi|295085725|emb|CBK67248.1| RNAse R [Bacteroides xylanisolvens XB1A]
gi|298271296|gb|EFI12872.1| ribonuclease R [Bacteroides sp. D22]
gi|335938026|gb|EGM99920.1| ribonuclease R [Bacteroides sp. 1_1_30]
Length = 718
Score = 249 bits (636), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 153/435 (35%), Positives = 228/435 (52%), Gaps = 53/435 (12%)
Query: 442 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWE 500
++ EW +++ P V+ + G+ G+ +++AIL E + P+++ + +P E
Sbjct: 196 VKVTEWPDKAKNPIGQVIDILGQAGDNTTEMHAILAEFGLPY--VYPKAVETAADKIPAE 253
Query: 501 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 560
+ EE+ R+D R FTIDP A D DDALSI +L DG+ VGVHIADV+++V G+
Sbjct: 254 ISAEEIAKREDFRKVTTFTIDPKDAKDFDDALSIRKLKDGLWEVGVHIADVTHYVKEGSI 313
Query: 561 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIG 620
+D EA+ R+TSVY++ R IPMLP L + SL P ++LAFS+ +D+ G+V D I
Sbjct: 314 IDKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPNEEKLAFSVIFDITEKGEVRDSRIV 373
Query: 621 RTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKI 680
TVI S + +YE AQ II+ K EG D + +L ++K
Sbjct: 374 HTVINSDRRFTYEEAQQIIETK----------EG-----------DFKEEVLTLDTIAKA 412
Query: 681 LKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVI-- 738
L++KRF+ GA+ + + F DE G P +D N L EEFMLLANKT AE I
Sbjct: 413 LREKRFSAGAINFDRYEVKFEIDEKGKPISVYFKESKDANKLVEEFMLLANKTVAEKIGC 472
Query: 739 ------ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQ 787
A+ P R H P+ KL F ++ G ++ TS S + L+
Sbjct: 473 VPKNKKAKVLP----YRIHDLPDPEKLENLSQFIARFGYKVRTSGTKTDISKSINHLLDD 528
Query: 788 AREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRY 847
K ++ +++ + R MQ A Y + GHY LAF YTHFTSP+RR+
Sbjct: 529 IHGKKEE-----NLIETVSIRAMQKARYSTH-------NIGHYGLAFEYYTHFTSPIRRF 576
Query: 848 PDLVVHRTLNAALEA 862
PD++VHR + ++
Sbjct: 577 PDMMVHRLVTKYMDG 591
>gi|397586419|gb|EJK53608.1| hypothetical protein THAOC_26924, partial [Thalassiosira oceanica]
Length = 752
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 146/384 (38%), Positives = 213/384 (55%), Gaps = 20/384 (5%)
Query: 483 CSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGIS 542
SGF L+CLP +++ E R DLR+ + +IDP D+DDAL L +G
Sbjct: 214 VSGFV---LACLPPADYKIELEP--GRTDLRHLPVLSIDPPGCKDIDDALHCIELPNGNW 268
Query: 543 RVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAF 602
+VGVHIADV+++V GTA+D+EA RSTS Y++ R++ MLP LL+ ++ SL VDR AF
Sbjct: 269 QVGVHIADVTHYVEAGTAIDLEAADRSTSTYLVNRRLDMLPSLLTTDLCSLKGNVDRFAF 328
Query: 603 SIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQF 662
++ W++ ++V +++I S L+Y+ AQ +ID G+G ++
Sbjct: 329 TVLWEVTPDAEIVGVDFVKSIIHSIAALTYQQAQSLID-----RPDGAGGDGDVEIQAG- 382
Query: 663 EWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNF 721
++K L ++++ + +R GAL L + + F+ D E P D + N
Sbjct: 383 -------AVKRLARLARLFRKRRIDAGALTLASPEVKFVLDSESLNPTDVQAYTLYEANA 435
Query: 722 LFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQF 781
L EEFMLLAN T A+ I R +P ++LRRHPAPN + G+ L S +
Sbjct: 436 LVEEFMLLANVTVAKKILRHYPTLSILRRHPAPNRSMFDGLISKARTRGVSLCIDDSKKL 495
Query: 782 HQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFT 841
SL+ A + DD L +L +TR M A YFCSG++ DW HY LA PVYTHFT
Sbjct: 496 ADSLDAAGRAMSDDPYLDKLLRVLSTRCMSPAQYFCSGEYS-AKDWHHYGLAAPVYTHFT 554
Query: 842 SPLRRYPDLVVHRTLNAALEAEKL 865
SP+RRY D+ VHR L +A+ + L
Sbjct: 555 SPIRRYADVCVHRLLASAIGVQPL 578
>gi|153807031|ref|ZP_01959699.1| hypothetical protein BACCAC_01308 [Bacteroides caccae ATCC 43185]
gi|423219986|ref|ZP_17206482.1| ribonuclease R [Bacteroides caccae CL03T12C61]
gi|149130151|gb|EDM21361.1| ribonuclease R [Bacteroides caccae ATCC 43185]
gi|392624249|gb|EIY18342.1| ribonuclease R [Bacteroides caccae CL03T12C61]
Length = 718
Score = 249 bits (635), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 151/425 (35%), Positives = 224/425 (52%), Gaps = 45/425 (10%)
Query: 442 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWE 500
++ EW +++ P V+ + G+ GE +++AIL E + P+S+ + +P E
Sbjct: 196 VKVTEWPDKAKNPIGQVIDILGKAGENTTEMHAILAEFGLPY--VYPKSVETAADKIPAE 253
Query: 501 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 560
+ EE+ R+D R FTIDP A D DDALSI +L +G+ VGVHIADV+++V G
Sbjct: 254 ISAEEIAKREDFRKVTTFTIDPKDAKDFDDALSIRKLKEGLWEVGVHIADVTHYVKEGGI 313
Query: 561 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIG 620
+D EA+ R+TSVY++ R IPMLP L + SL P ++LAFS+ +++ G+V D I
Sbjct: 314 IDKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPNEEKLAFSVIFNITEKGEVKDSRIV 373
Query: 621 RTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKI 680
TVI S + +YE AQ II+ K EG D + +L ++K
Sbjct: 374 HTVINSDRRFTYEEAQQIIETK----------EG-----------DFKEEVLTLDTIAKA 412
Query: 681 LKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR 740
L++KRF+ GA+ + + F DE G P +D N L EEFMLLAN+T AE + R
Sbjct: 413 LREKRFSAGAINFDRYEVKFEIDEKGKPISVYFKESKDANKLVEEFMLLANRTVAEKVGR 472
Query: 741 AFPDSAL----LRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREK 791
+ R H P+ KL F ++ G ++ TS S + L+ K
Sbjct: 473 VPKNKKAKVLPYRIHDLPDPEKLENLSQFIARFGYKVRTSGTKTDISKSINHLLDDIHGK 532
Query: 792 LKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 851
++ +++ + R MQ A Y + GHY LAF YTHFTSP+RR+PD++
Sbjct: 533 KEE-----NLIETVSIRAMQKARYSTH-------NIGHYGLAFEYYTHFTSPIRRFPDMM 580
Query: 852 VHRTL 856
VHR L
Sbjct: 581 VHRLL 585
>gi|427385040|ref|ZP_18881545.1| ribonuclease R [Bacteroides oleiciplenus YIT 12058]
gi|425727208|gb|EKU90068.1| ribonuclease R [Bacteroides oleiciplenus YIT 12058]
Length = 713
Score = 249 bits (635), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 154/431 (35%), Positives = 224/431 (51%), Gaps = 45/431 (10%)
Query: 442 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWE 500
++ EW +++ P V+ + G+ G+ +++AIL E + P S+ +P E
Sbjct: 193 VKVVEWPDKAKNPIGQVIDILGKAGDNTTEMHAILAEFGLPY--VYPASVEKAADKIPAE 250
Query: 501 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 560
+ EE+ R+D R FTIDP A D DDALSI +L +G+ VGVHIADVS++V G
Sbjct: 251 ISDEEIAKREDFRGVTTFTIDPKDAKDFDDALSIRKLKEGLWEVGVHIADVSHYVTEGGI 310
Query: 561 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIG 620
+D EA+ R+TSVY++ R IPMLP L + SL P ++LA+S+ +D+N GDV + +
Sbjct: 311 IDKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPNEEKLAYSVIFDINEKGDVKNARVV 370
Query: 621 RTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKI 680
TVI+S + +YE AQ II+ K EG D + L ++K
Sbjct: 371 HTVIKSDRRFTYEEAQQIIETK----------EG-----------DFKEEVLMLDTIAKA 409
Query: 681 LKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR 740
L+ KRF GA+ + + F D+ G P +D N L EEFMLLAN+T AE I R
Sbjct: 410 LRQKRFVAGAINFDRYEVKFEIDDKGKPISVYFKESKDANKLVEEFMLLANRTVAEKIGR 469
Query: 741 A----FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREK 791
P R H P+ KL F ++ G +L TS S + L+ + K
Sbjct: 470 VPKNKKPKVFPYRIHDLPDPEKLDNLAQFIARFGYKLRTSGTKTDVSKSINHLLDDIQGK 529
Query: 792 LKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 851
++ +++ + R MQ A Y + GHY LAF YTHFTSP+RR+PD++
Sbjct: 530 KEE-----NLIETVSIRAMQKARYSTH-------NIGHYGLAFDYYTHFTSPIRRFPDMM 577
Query: 852 VHRTLNAALEA 862
VHR L L+
Sbjct: 578 VHRLLTKYLDG 588
>gi|374373387|ref|ZP_09631047.1| ribonuclease R [Niabella soli DSM 19437]
gi|373234360|gb|EHP54153.1| ribonuclease R [Niabella soli DSM 19437]
Length = 664
Score = 249 bits (635), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 175/529 (33%), Positives = 254/529 (48%), Gaps = 77/529 (14%)
Query: 340 MISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDRE 399
+ S Y TK G++ +++R R +G L +N+ F + G R+
Sbjct: 63 LTSGYDTKL-KGKITEVVQRG--RTEFIGSLQMNKGFGFVLGDRE--------------- 104
Query: 400 YIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVL 459
K LPD I E + + + V A++ W +E P +L
Sbjct: 105 ------------------KGLPD-IYIPEENLNGALNGQKVVAKMLRWEKEDKRPVGTIL 145
Query: 460 HVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFT 519
V + + L E S FS E++ +P + +++L RKD+R FT
Sbjct: 146 SVLDEAQAGDIAMKETLLEKGFPLS-FSDEAMEVANRIPDRITKDDLAKRKDVRGILTFT 204
Query: 520 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 579
IDP A D DDA+S L +G VGVHIADVS++V PGTALD EA R+TSVY+ R
Sbjct: 205 IDPEDAKDFDDAISFRVLKNGNYEVGVHIADVSHYVTPGTALDDEAYQRATSVYLPDRVN 264
Query: 580 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDII 639
PMLP +S + SL P D+L FS + LN +V W+G+TVI S + +YE AQ II
Sbjct: 265 PMLPEHISNVLCSLRPNEDKLTFSAIFQLNDKAEVKQYWLGKTVIHSNRRYTYEDAQQII 324
Query: 640 DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPV 699
+ G G D ++ +++++S+ L+ RF +GA+ +++
Sbjct: 325 E----------TGAG-----------DNAAALLTVHKLSQRLRQNRFDEGAINFNSTEVR 363
Query: 700 FLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALL----RRHPAPN 755
F DE G P L ++ N L EE MLLANK AE ++ ++ L R H P+
Sbjct: 364 FKLDENGVPVGITLKVSKEANQLIEELMLLANKYVAESASKVKINNKTLPFPYRIHDTPD 423
Query: 756 MRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLK---DDYVLFDILINYATRPMQL 812
KL F AF +K G + D SS+ S ++ + +K ++ VL + I R M
Sbjct: 424 EEKLLPFVAFTNKFGYKFDISSAESIAASFDKLLKDIKGRPEEAVLQQLGI----RTMAK 479
Query: 813 ASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 861
A Y S + GHY L F Y HFTSP+RRYPD++VHR L LE
Sbjct: 480 AKYTSS-------NIGHYGLGFENYCHFTSPIRRYPDIMVHRILEEILE 521
>gi|313675162|ref|YP_004053158.1| RNAse r [Marivirga tractuosa DSM 4126]
gi|312941860|gb|ADR21050.1| RNAse R [Marivirga tractuosa DSM 4126]
Length = 721
Score = 248 bits (634), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 154/432 (35%), Positives = 229/432 (53%), Gaps = 41/432 (9%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 499
V A I W + P+A V+ V G GE E +I++I+ E + F + +
Sbjct: 196 VIAEIKSWGDLDRKPEAKVIKVLGPAGENEAEIHSIMAEFELPME-FPEAVIKESEKISD 254
Query: 500 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 559
++P++E+ R+D+R+ FTIDP A D DDA+S +RL +G +G+HIADV+Y+V PGT
Sbjct: 255 KLPEKEIAKRRDMRDTTTFTIDPEDAKDFDDAISFKRLDNGHYEIGIHIADVTYYVQPGT 314
Query: 560 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 619
L+ EA R+TSVY++ R IPMLP LS + SL P D+ FS ++L+ G + + W
Sbjct: 315 LLEEEAFHRATSVYLVDRTIPMLPERLSNGLCSLRPNEDKFTFSAVFELDDNGTIHNEWF 374
Query: 620 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 679
GRT+ S + +YE AQ I++ + +G+ +L+ SL ++K
Sbjct: 375 GRTITHSDRRFAYEEAQAILEAR--------IGDHAEELH-------------SLNSIAK 413
Query: 680 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 739
LK RF GA+ E+ + F DE G P V R+D + L EE+MLLAN+ AE IA
Sbjct: 414 NLKATRFKHGAIAFESVEVKFKLDENGKPLGVVPKVRQDAHKLVEEYMLLANRKVAEFIA 473
Query: 740 -RAFPDSAL---LRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDD 795
+ D L R+H P+ KL F F + G +L+ +++ ++ L +D
Sbjct: 474 TKKKGDQKLTFVYRQHDYPDPEKLSTFSIFAKRFGHELEIEE-----KAVAKSLNSLMND 528
Query: 796 YV---LFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 852
++L + A R M A Y F H+ LAF YTHFTSP+RRYPD++V
Sbjct: 529 IQGKPEQNVLESLAIRSMAKAKYTTKNSF-------HFGLAFQYYTHFTSPIRRYPDVMV 581
Query: 853 HRTLNAALEAEK 864
HR L L+ K
Sbjct: 582 HRLLQHYLDQGK 593
>gi|386321357|ref|YP_006017519.1| Exoribonuclease R [Riemerella anatipestifer RA-GD]
gi|325335900|gb|ADZ12174.1| Exoribonuclease R [Riemerella anatipestifer RA-GD]
Length = 695
Score = 248 bits (634), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 152/430 (35%), Positives = 224/430 (52%), Gaps = 35/430 (8%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 499
V ++ EWN P ++ V G G E +I++IL E + + F E +
Sbjct: 168 VVVKMVEWNPTEKNPHGEIVKVLGTPGSHETEIHSILAEYGLPYA-FPEEVEKEADAIDR 226
Query: 500 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 559
E+ +E+ R D+R C FTIDP A D DDALSI +L +G +GVHIADVS++V+ T
Sbjct: 227 EIRDDEVKKRWDMRGICTFTIDPKDAKDFDDALSIRKLENGNWEIGVHIADVSHYVVSNT 286
Query: 560 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 619
LD EA R+TSVY++ R +PMLP +LS EV SL P D+ FS ++LN ++ +W
Sbjct: 287 LLDQEAYQRATSVYLVDRVVPMLPEVLSNEVCSLRPNEDKYTFSAVFELNDKAEIKKQWF 346
Query: 620 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 679
GRTVI S + +YE AQ+ I+ G+G D+ I +L ++K
Sbjct: 347 GRTVIHSDRRFTYEEAQERIE----------TGKG-----------DLADEILTLDRLAK 385
Query: 680 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 739
IL+++R GA+ + S+ F DE P +D N L EEFMLLAN+ +E I+
Sbjct: 386 ILREERIRKGAITFDRSEVRFNLDENNEPLGVYFKVSKDSNHLIEEFMLLANRKVSEFIS 445
Query: 740 ---RAFP--DSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 794
+ P + + R H P+ KL F + G +++ ++S + +S+ + + +K
Sbjct: 446 LNKKGSPTGKTFIYRVHDDPDPTKLEALRDFVATFGYKMNLANSQKVAESMNELLKSVKG 505
Query: 795 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 854
+++ A R M A Y GHY L F YTHFTSP+RRYPDL+ HR
Sbjct: 506 KGEE-NMIETLAMRSMSKAVYSTE-------PIGHYGLGFEYYTHFTSPIRRYPDLIAHR 557
Query: 855 TLNAALEAEK 864
L L+ K
Sbjct: 558 LLQHYLDQGK 567
>gi|358333592|dbj|GAA52077.1| DIS3-like exonuclease 1 [Clonorchis sinensis]
Length = 1067
Score = 248 bits (634), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 188/581 (32%), Positives = 280/581 (48%), Gaps = 88/581 (15%)
Query: 433 ATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLS 492
AT+ E RID W+ S +P H +H G G++E + +L E+ + FS L
Sbjct: 298 ATLAKERFVVRIDSWDAGSNYPHGHFVHSLGPIGDLETETQTLLIEHNLPIRAFSDAQLR 357
Query: 493 CLPCV----PWEVPQEELLSRKDLR-----------NFCIFTIDPSTATDLDDALSIERL 537
L PW+V E+ R+DLR + IF+IDP D+DD LS+ L
Sbjct: 358 ELSPYSVQRPWKVDPAEVARRRDLRSPAVSGNPASEDVLIFSIDPQGCQDVDDTLSVRWL 417
Query: 538 -----SDGIS----RVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSE 588
DG + ++GVHIADV++FV PG +D EA+ R+TSVY+ R+ MLP LLS
Sbjct: 418 DPIVMEDGSTHRRLQLGVHIADVTFFVPPGGFVDAEARRRTTSVYLADRRYDMLPGLLSG 477
Query: 589 EVGSLNPGVDRLAFSIFWDLN-SAGDVVDRWIGRTVIRSCCKLSYEHAQDIID---GKFD 644
++ SL GVDR A S+ W+L+ ++ DV+D W GRTVIRS KL+YE AQ I D K D
Sbjct: 478 DLCSLWSGVDRYAVSVLWELDMNSFDVLDVWYGRTVIRSAYKLTYEVAQQIYDTPVTKND 537
Query: 645 VESSNT--------------LGEGWPQLYG---QFEWSDVVR---SIKSLYEVSKILKDK 684
+ + LGE P+L G + +++V+ SI+ L +V+ ++ +
Sbjct: 538 TAAGASHAEQLLAKMGGPEKLGELIPELKGLKKDRQLAELVKLESSIRLLVDVASAVRTR 597
Query: 685 RFTDGALRLENSKPVFLF----DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR 740
R G L L++ + F G D V +++ E M+ AN A
Sbjct: 598 RVARGGLELDSIEIGVRFANPETRSGKLEDLVPKEPLEMHGTVAELMIFANHWVARRCLE 657
Query: 741 AFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFD 800
+PD + LRRHP P E + + G QLD S+ SL +A + +D +
Sbjct: 658 TYPDRSCLRRHPPPRPEFFDELQRCAASRGFQLDIESNRSLGASLAKADD--PNDPEVKR 715
Query: 801 ILINYATRPMQLASYFCSG-DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAA 859
+L+ TR M A YF +G D + HY LA +YTHFTSP+RRY D++VHR L A
Sbjct: 716 VLLQLTTRAMTNALYFSTGVDNLTREQFAHYGLALNLYTHFTSPIRRYADVLVHRVLLTA 775
Query: 860 LEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREAL------SVAALKY 913
L + R + GR A+ + GR A +V ++
Sbjct: 776 L---------------GDCRSAISGR-----------ADEVLGRSAKPPHLNPTVFGPEH 809
Query: 914 GVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKK 954
+P + L + H N++ A + V+ A V+L+ + K +
Sbjct: 810 LMPSEE-LSEICQHMNEQHWAAQQVQRASVELFQALFFKDR 849
>gi|295668038|ref|XP_002794568.1| mitotic control protein dis3 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226285984|gb|EEH41550.1| mitotic control protein dis3 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1036
Score = 248 bits (634), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 188/530 (35%), Positives = 264/530 (49%), Gaps = 68/530 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 407
+PT RVV I++R+ W Y G K + ++ S ++ + + P
Sbjct: 379 QPTARVVGIVKRN--------------WRQYVGNIDKISTAAQAK-SGRRQQTVFVIPMD 423
Query: 408 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG---- 463
+ PK+ + + + +R + +D W+ +S +P H + G
Sbjct: 424 KRIPKIRIRTRQAQELFGQR------------ILVTVDAWDRDSRYPTGHFVRSLGELET 471
Query: 464 RGGEVEPQINAILYENAICCSGFSPESLSCLPCVP--WEVPQE----ELLSRKDLRNFCI 517
+G E E A+L E + F L CLP W+VPQ RKDLR +
Sbjct: 472 KGAETE----ALLLEYDVQYRPFPQIVLDCLPPEGHNWKVPQNMDDPGWHDRKDLRELLV 527
Query: 518 FTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 577
+IDP D+DDAL L +G VGVHIADVS+FV P T +D EA +R T+VY++ +
Sbjct: 528 CSIDPPGCQDIDDALHARPLPNGNIEVGVHIADVSHFVKPNTPMDTEASMRGTTVYLVDK 587
Query: 578 KIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQD 637
+I MLP+LL ++ SL P V R AFS W++ + +VV ++VI S SYE AQ
Sbjct: 588 RIDMLPMLLGTDLCSLKPHVQRYAFSTIWEMTPSAEVVSSTCTKSVIFSREAFSYEQAQL 647
Query: 638 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 697
ID D+ ++ L E S+++L ++SK+LK KR GAL L + +
Sbjct: 648 RID---DISKTDELTE----------------SMRTLLKLSKLLKQKRMDAGALNLASPE 688
Query: 698 PVFLFD-EYGTPYDSVLS-GREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPN 755
D E P V + + N L EEFMLLAN T A I +AFP +A+LRRH P
Sbjct: 689 VRIETDSELSDPVTDVKTKALLETNSLVEEFMLLANITVASKIFKAFPQTAMLRRHATPP 748
Query: 756 MRKLREFEAFCS-KHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLA 813
E A S K + LD SSS SL+ + F+ LI ATR M A
Sbjct: 749 PSNFEELIAQLSKKRNMTLDVSSSLALATSLDHCVDPANP---FFNTLIRILATRCMTSA 805
Query: 814 SYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE 863
YFC+G ++++ HY LA P+YTHFTSP+RRY DLVVHR L AA+ E
Sbjct: 806 EYFCAGAHA-ESEFRHYGLASPIYTHFTSPIRRYADLVVHRQLAAAIGYE 854
Score = 43.5 bits (101), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Query: 150 SHQSEA-RCKIFAP-HWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLIT 207
+H S A R ++F P ++S+ + L G + ++ V+ +N LE ++ +LI
Sbjct: 244 AHSSRATRGQLFYPEYYSISKMMTGLRAGTLHQGVFNVSPYNYLEGSVQVAAFDKSLLIL 303
Query: 208 GIAAQNRAVEGDFVLIKVDRLSLW-AKMKGFSNNSSIVEDSN 248
G NRA+ GD V+++V W A + ++ +D N
Sbjct: 304 GRDNSNRAISGDIVVVEVLPKDQWKAPSTKIVDEETVTKDEN 345
>gi|313206658|ref|YP_004045835.1| rnase r [Riemerella anatipestifer ATCC 11845 = DSM 15868]
gi|383485963|ref|YP_005394875.1| rnase r [Riemerella anatipestifer ATCC 11845 = DSM 15868]
gi|416112219|ref|ZP_11593184.1| Ribonuclease R [Riemerella anatipestifer RA-YM]
gi|442314133|ref|YP_007355436.1| hypothetical protein G148_0437 [Riemerella anatipestifer RA-CH-2]
gi|312445974|gb|ADQ82329.1| RNAse R [Riemerella anatipestifer ATCC 11845 = DSM 15868]
gi|315022155|gb|EFT35184.1| Ribonuclease R [Riemerella anatipestifer RA-YM]
gi|380460648|gb|AFD56332.1| rnase r [Riemerella anatipestifer ATCC 11845 = DSM 15868]
gi|441483056|gb|AGC39742.1| hypothetical protein G148_0437 [Riemerella anatipestifer RA-CH-2]
Length = 721
Score = 248 bits (634), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 152/430 (35%), Positives = 224/430 (52%), Gaps = 35/430 (8%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 499
V ++ EWN P ++ V G G E +I++IL E + + F E +
Sbjct: 194 VVVKMVEWNPTEKNPHGEIVKVLGTPGSHETEIHSILAEYGLPYA-FPEEVEKEADAIDR 252
Query: 500 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 559
E+ +E+ R D+R C FTIDP A D DDALSI +L +G +GVHIADVS++V+ T
Sbjct: 253 EIRDDEVKKRWDMRGICTFTIDPKDAKDFDDALSIRKLENGNWEIGVHIADVSHYVVSNT 312
Query: 560 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 619
LD EA R+TSVY++ R +PMLP +LS EV SL P D+ FS ++LN ++ +W
Sbjct: 313 LLDQEAYQRATSVYLVDRVVPMLPEVLSNEVCSLRPNEDKYTFSAVFELNDKAEIKKQWF 372
Query: 620 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 679
GRTVI S + +YE AQ+ I+ G+G D+ I +L ++K
Sbjct: 373 GRTVIHSDRRFTYEEAQERIE----------TGKG-----------DLADEILTLDRLAK 411
Query: 680 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 739
IL+++R GA+ + S+ F DE P +D N L EEFMLLAN+ +E I+
Sbjct: 412 ILREERIRKGAITFDRSEVRFNLDENNEPLGVYFKVSKDSNHLIEEFMLLANRKVSEFIS 471
Query: 740 ---RAFP--DSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 794
+ P + + R H P+ KL F + G +++ ++S + +S+ + + +K
Sbjct: 472 LNKKGSPTGKTFIYRVHDDPDPTKLEALRDFVATFGYKMNLANSQKVAESMNELLKSVKG 531
Query: 795 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 854
+++ A R M A Y GHY L F YTHFTSP+RRYPDL+ HR
Sbjct: 532 KGEE-NMIETLAMRSMSKAVYSTE-------PIGHYGLGFEYYTHFTSPIRRYPDLIAHR 583
Query: 855 TLNAALEAEK 864
L L+ K
Sbjct: 584 LLQHYLDQGK 593
>gi|443243331|ref|YP_007376556.1| ribonuclease R [Nonlabens dokdonensis DSW-6]
gi|442800730|gb|AGC76535.1| ribonuclease R [Nonlabens dokdonensis DSW-6]
Length = 732
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 152/431 (35%), Positives = 226/431 (52%), Gaps = 20/431 (4%)
Query: 438 ELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV 497
++V EWN++ P V + G GE + +I+AIL + + F E +
Sbjct: 187 QVVLVEFVEWNDKQDSPNGRVKDILGEPGEHDTEIHAILAQYGLPYE-FPAEVEEYTEKL 245
Query: 498 PWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLP 557
+ +E+ R+D+RN +TIDP+ A D DDALS + L +G +G+HIADVS++V
Sbjct: 246 DKSISGKEIEKRRDMRNTLTYTIDPADAKDFDDALSFKTLENGNYEIGIHIADVSHYVKE 305
Query: 558 GTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR 617
GT LD EA R+TSVY++ R +PMLP +LS V SLNP D+L FS +++++ +
Sbjct: 306 GTVLDDEAYERATSVYLVDRVVPMLPEVLSNGVCSLNPHEDKLCFSAVFEMDNDCKIHKE 365
Query: 618 WIGRTVIRSCCKLSYEHAQDIID-GKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 676
W GRTVI S + +YE AQ II+ GK ++ +L + +++V + L E
Sbjct: 366 WFGRTVIHSDQRFAYEEAQHIIETGKGEIPVEISLSRKQTSI-----KAEIVEATLKLDE 420
Query: 677 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 736
++K +++KR GAL + ++ F ++ P +D N L EEFMLLAN+ A
Sbjct: 421 LAKKMREKRMDSGALSFDKTEVKFNLNDAAEPVGVYFKTSKDANKLIEEFMLLANRKVAA 480
Query: 737 VIARAFPDSALLRR-HPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLK-- 793
I + P + R H PN KL + K G LD +SL + +K
Sbjct: 481 FIGKKQPKKTFIYRIHDEPNDEKLGALKNIVVKFGHSLDLRDRKTVTKSLNKLLSDVKGA 540
Query: 794 DDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVH 853
+ + D L A R M A Y + + GHY LAF Y+HFTSP+RRYPD++VH
Sbjct: 541 KEQNMVDTL---AIRTMSKAVYSTN-------NIGHYGLAFDYYSHFTSPIRRYPDVMVH 590
Query: 854 RTLNAALEAEK 864
R L L+ K
Sbjct: 591 RLLQHYLDGGK 601
>gi|221057578|ref|XP_002261297.1| mitotic control protein dis3 homologue [Plasmodium knowlesi strain
H]
gi|194247302|emb|CAQ40702.1| mitotic control protein dis3 homologue,putative [Plasmodium
knowlesi strain H]
Length = 992
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 158/442 (35%), Positives = 229/442 (51%), Gaps = 40/442 (9%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 499
V ID W+ S +P L V G +VE + I E I FS + CLP W
Sbjct: 451 VIVVIDRWDYNSKYPLGRCLSVLGICDDVETETKLIYNEYNISTKEFSESAYKCLPPSDW 510
Query: 500 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDG-ISRVGVHIADVSYFVLPG 558
+P++E R+D R+ F+IDP D+DDALS++ L + I VGVHIADVSYFV
Sbjct: 511 VIPEDEYYKRRDFRDVLTFSIDPPGCEDIDDALSVQVLEEQQIIEVGVHIADVSYFVKQN 570
Query: 559 TALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW 618
+ALD+EA R T+VY++ +++ MLP LL+ ++ SL G DRL +S + + ++ D
Sbjct: 571 SALDLEASKRCTTVYLINQRVEMLPKLLTTDLCSLVEGQDRLTYSCIFTFDMNYEIRDIN 630
Query: 619 IGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVS 678
I + +IRS SYE AQ++ID + D S +++ L ++
Sbjct: 631 INKCIIRSNKSFSYEEAQNMIDDRKDC-------------------SRTAEALRLLNNIA 671
Query: 679 KILKDKRFTDGALRLE-NSKPVFLFDEYG-------TPYDSVLSGREDLNFLFEEFMLLA 730
K LK K +GAL L NS+ +F F+ PY S D N L E FMLLA
Sbjct: 672 KYLKKKWLNEGALELRGNSEVLFEFESNDFSKTKNLKPYVSY-----DTNKLIEAFMLLA 726
Query: 731 NKTAAEVIARAFPDSALLRRHPAP---NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQ 787
N++ A +I + F + +LRRHP P N+++L ++ + H + TS + S+
Sbjct: 727 NRSVARIIYQGFKAACVLRRHPPPKNENLKELNDYLESINIHDFKYGTSK--ELSYSINN 784
Query: 788 AREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRY 847
LKDD VL +IL T+ M A + + ++ HY LA +YT FTSP+RRY
Sbjct: 785 IN--LKDDKVLSNILKILITKCMNEAVFISGYNVHNNEMLRHYGLAADIYTFFTSPIRRY 842
Query: 848 PDLVVHRTLNAALEAEKLYWKH 869
D++VHR LN E L K+
Sbjct: 843 ADIMVHRVLNHIYGIEVLDKKY 864
>gi|329962724|ref|ZP_08300647.1| ribonuclease R [Bacteroides fluxus YIT 12057]
gi|328529558|gb|EGF56461.1| ribonuclease R [Bacteroides fluxus YIT 12057]
Length = 715
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 155/430 (36%), Positives = 225/430 (52%), Gaps = 45/430 (10%)
Query: 442 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWE 500
+I EW +++ P V+ + GR G+ +++AIL E + P ++ +P E
Sbjct: 194 VKIVEWPDKAKNPIGQVIDILGRAGDNTTEMHAILAEFGLPY--VYPSAVEKAADKIPDE 251
Query: 501 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 560
+P EE+ R+D RN FTIDP A D DDALSI RL D + VGVHIADV+++V G
Sbjct: 252 IPAEEIARREDFRNVTTFTIDPKDAKDFDDALSIRRLKDNLWEVGVHIADVTHYVKEGGI 311
Query: 561 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIG 620
+D EA+ R+TSVY++ R IPMLP L + SL P ++LA+S+ +++ G++ +
Sbjct: 312 IDKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPDEEKLAYSVIFEMTEKGEIKHSRVV 371
Query: 621 RTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKI 680
TVI+S + +YE AQDII+ G+G D I L +KI
Sbjct: 372 HTVIKSNRRFTYEEAQDIIE----------TGKG-----------DFKEEILQLDRFAKI 410
Query: 681 LKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR 740
L+D RF GA+ + + F DE G P +D N L EEFMLLAN+T AE I R
Sbjct: 411 LRDNRFKAGAINFDRYEVKFEIDEKGKPVSVYFKVSKDANKLVEEFMLLANRTVAEKIGR 470
Query: 741 A--FPDSALL--RRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREK 791
+ +L R H P+ KL F ++ G +L T S + L+ + K
Sbjct: 471 VPKGKKAKVLPYRIHDLPDPEKLDNLAQFIARFGYKLRTGGTKTDISKSINHLLDDIQGK 530
Query: 792 LKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 851
++ +++ + R MQ A Y + GHY LAF YTHFTSP+RR+PD++
Sbjct: 531 KEE-----NLIETVSIRAMQKARYSVH-------NVGHYGLAFDYYTHFTSPIRRFPDMM 578
Query: 852 VHRTLNAALE 861
VHR L L+
Sbjct: 579 VHRLLTKYLD 588
>gi|340386056|ref|XP_003391524.1| PREDICTED: DIS3-like exonuclease 1-like, partial [Amphimedon
queenslandica]
Length = 524
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 182/517 (35%), Positives = 261/517 (50%), Gaps = 41/517 (7%)
Query: 343 SYPTKRPTGRVVSIIERSPRRDGIVGF-LNVNQWFNYKGGSRKDAKKNRSSLSVPDREYI 401
SY + RPTGRVV I RS R D I F + Q K S +K +
Sbjct: 41 SYDSPRPTGRVVGIWSRSDR-DIIASFPVKFKQRRCLKNVSSDKMRK------------V 87
Query: 402 QLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHV 461
+ P PK+ I RL ++ + R D+W+ S +P H +
Sbjct: 88 LVVPYDIGIPKI---------RINTRLSN---ELKHHRIVVRFDDWDINSHYPNGHFVRS 135
Query: 462 FGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEELLSRKDLRNFCIFTI 520
G G+ E +I AIL EN + S F+ LS LP W++ EEL R+DLR+ I++I
Sbjct: 136 IGPIGDTETEIQAILIENELSTSSFTQSILSELPDGDSWKIEDEELRKRRDLRSHLIYSI 195
Query: 521 DPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIP 580
DP D+DDALS++ L GI +GVHIADVSYFV G+ D EA+ RST+VY+ R+
Sbjct: 196 DPKGCEDVDDALSVKSLRRGIE-LGVHIADVSYFVRSGSYTDREAKERSTTVYLADRRYD 254
Query: 581 MLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIID 640
MLP +LS + SL VDR A S+ L+ ++ W GRT+IRS KL+YE AQD+ +
Sbjct: 255 MLPAVLSSNLCSLLSNVDRYAVSVICTLDPHYEIKSIWYGRTIIRSAYKLTYEVAQDLFE 314
Query: 641 GKFDVESSNTLGE------GWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLE 694
K D + + E P+L + S++ SIK L E++++L++KR +GAL LE
Sbjct: 315 DKDDEYMISLIPELSESKLTPPELAEKV--SELRHSIKKLVEIARVLREKRNRNGALELE 372
Query: 695 NSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAP 754
+ + D + ++++ E M+ AN+ A I+ P ALLR H AP
Sbjct: 373 GVEVKIQMTDKDNIDDIIPKKPQEIHETVAECMIFANEWVARKISHQLPSKALLRSHGAP 432
Query: 755 NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLAS 814
+ S G + TSS+ + QSL+ A ++ D + +L AT+ M A
Sbjct: 433 PQDMFSSLKECASARGYVIKTSSNLKLAQSLDNAVDEF--DPEVNKVLRMLATQSMIQAL 490
Query: 815 YFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 851
Y +G + HY L YTHFTSP+RRY DL+
Sbjct: 491 YTSTG---SNHKLSHYGLGIECYTHFTSPIRRYADLL 524
>gi|340617688|ref|YP_004736141.1| ribonuclease r [Zobellia galactanivorans]
gi|339732485|emb|CAZ95753.1| Ribonuclease R [Zobellia galactanivorans]
Length = 731
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 153/432 (35%), Positives = 219/432 (50%), Gaps = 30/432 (6%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 499
V + + W + P + V G+ GE +I+AIL E + F E +
Sbjct: 191 VVVKFESWPDGDDSPTGKITEVLGKPGEHNTEIHAILAEYGLPYD-FPEEVEHFADKIDT 249
Query: 500 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 559
+ +EE+ R+D+R+ FTIDP A D DDALS E L +G +G+HIADVS+++ P T
Sbjct: 250 SIKEEEIAKRRDMRDTLTFTIDPKDAKDFDDALSFEVLENGNYEIGIHIADVSHYLEPDT 309
Query: 560 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 619
LD EA R+TSVY++ R +PMLP +LS SL P ++ FS ++++ + ++W
Sbjct: 310 ILDDEAYERATSVYLVDRVVPMLPEVLSNNACSLRPNEEKYTFSAIFEIDKKAQIKNQWF 369
Query: 620 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGW-PQLYGQFEWS-----DVVRSIKS 673
GRTVI S + +YE AQ II+ GEG P+ E + DVV++
Sbjct: 370 GRTVINSNERFAYEEAQHIIE----------TGEGHIPEDISIREEAYSVSDDVVKATLE 419
Query: 674 LYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKT 733
+ ++KI++DKR GA+ + + F +E P +D N L EEFMLLAN+
Sbjct: 420 MDRLAKIMRDKRMQQGAISFDKVEVRFNLNENSEPIGVFFKESKDANKLIEEFMLLANRK 479
Query: 734 AAEVIARAFPDSALLRR-HPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQ--ARE 790
AE I + P + R H P+ KL S+ G ++D SL Q +
Sbjct: 480 VAEFIGKQKPKKTFVYRIHDDPDEDKLIALNGLISRFGHKIDFQDKKSISASLNQLLSDV 539
Query: 791 KLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDL 850
K K + L D L R M A Y + GHY LAF YTHFTSP+RRYPD+
Sbjct: 540 KGKKEQNLVDTL---TIRSMSKAIYTTQ-------NIGHYGLAFDYYTHFTSPIRRYPDV 589
Query: 851 VVHRTLNAALEA 862
+VHR L L+
Sbjct: 590 MVHRLLQHYLDG 601
>gi|262405839|ref|ZP_06082389.1| ribonuclease R [Bacteroides sp. 2_1_22]
gi|294647800|ref|ZP_06725352.1| ribonuclease R [Bacteroides ovatus SD CC 2a]
gi|345510350|ref|ZP_08789918.1| ribonuclease R [Bacteroides sp. D1]
gi|229443054|gb|EEO48845.1| ribonuclease R [Bacteroides sp. D1]
gi|262356714|gb|EEZ05804.1| ribonuclease R [Bacteroides sp. 2_1_22]
gi|292636708|gb|EFF55174.1| ribonuclease R [Bacteroides ovatus SD CC 2a]
Length = 718
Score = 248 bits (632), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 151/435 (34%), Positives = 227/435 (52%), Gaps = 53/435 (12%)
Query: 442 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWE 500
++ EW +++ P ++ + G+ G+ +++AIL E + P+++ + +P E
Sbjct: 196 VKVTEWPDKAKNPIGQIIDILGQAGDNTTEMHAILAEFGLPY--VYPKAVETAADKIPAE 253
Query: 501 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 560
+ EE+ R+D R FTIDP A D DDALSI +L DG+ VGVHIADV+++V G
Sbjct: 254 ISAEEIAKREDFRKVTTFTIDPKDAKDFDDALSIRKLKDGLWEVGVHIADVTHYVKEGGI 313
Query: 561 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIG 620
+D EA+ R+TSVY++ R IPMLP L + SL P ++LAFS+ +D+ G++ D I
Sbjct: 314 IDKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPNEEKLAFSVIFDITEKGEIKDSRIV 373
Query: 621 RTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKI 680
TVI S + +YE AQ II+ K EG D + +L ++K
Sbjct: 374 HTVINSDRRFTYEEAQQIIETK----------EG-----------DFKEEVLTLDTIAKA 412
Query: 681 LKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVI-- 738
L++KRF+ GA+ + + F DE G P +D N L EEFMLLANKT AE I
Sbjct: 413 LREKRFSAGAINFDRYEVKFEIDEKGKPISVYFKESKDANKLVEEFMLLANKTVAEKIGC 472
Query: 739 ------ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQ 787
A+ P R H P+ KL F ++ G ++ TS S + L+
Sbjct: 473 VPKNKKAKVLP----YRIHDLPDPEKLENLSQFIARFGYKVRTSGTKTDISKSINHLLDD 528
Query: 788 AREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRY 847
K ++ +++ + R MQ A Y + GHY LAF YTHFTSP+RR+
Sbjct: 529 IHGKKEE-----NLIETVSIRAMQKARYSTH-------NIGHYGLAFEYYTHFTSPIRRF 576
Query: 848 PDLVVHRTLNAALEA 862
PD++VHR + ++
Sbjct: 577 PDMMVHRLVTKYMDG 591
>gi|348686498|gb|EGZ26313.1| hypothetical protein PHYSODRAFT_345136 [Phytophthora sojae]
Length = 1105
Score = 248 bits (632), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 221/773 (28%), Positives = 327/773 (42%), Gaps = 182/773 (23%)
Query: 150 SHQSEARCKIFAPHWSMEAVNEALEK--GDAFKALYRVNAHNRLEAYCKIEGVQTDVLIT 207
S QSE FAPH + EAL + V+ HN +EAY +EG
Sbjct: 295 SSQSE-----FAPHLKPAQLEEALAQPASRVLAGKLEVSTHNPMEAYVLVEGPH------ 343
Query: 208 GIAAQNRAVEGDFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKV 267
AVE FV + A M G+H D + V
Sbjct: 344 -------AVEKVFVFGR-------AAMN------------------RGVHGD----RVAV 367
Query: 268 DVSYEYSNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQ 327
++ + T S++ + H Y Q+ E + H S SD+ E+V
Sbjct: 368 EILPKAHWRTPQSDRLLVH--------YTQDEDEHQ--------HESESDADEQV----- 406
Query: 328 NDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRD-GIVGFLNVNQWFNYKGGSRKDA 386
P PTG+VV II RSPR V VN GG
Sbjct: 407 -----------------PGAIPTGQVVGIISRSPRYHVATVIASTVN------GGD---- 439
Query: 387 KKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDE 446
+Y P + PK+ + + L + KRL+ ID
Sbjct: 440 ------------DYALAVPMDVRLPKVRLRSQRLDALLDKRLK------------VVIDS 475
Query: 447 WNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP----------- 495
W +S +P H + + G G ++ +++A+L +N + + FS +L+CLP
Sbjct: 476 WAADSSYPNGHYVGILGAPGSLQTELSALLVDNEVEEAPFSEAALACLPSSDECPIDIEG 535
Query: 496 -CVP---------------WEVPQEELLSRKDLR-NFCIFTIDPSTATDLDDALSIERLS 538
CV W+VP EE+ R+DLR +F++DP D+DDA+SI+RL
Sbjct: 536 GCVAECSTAKRPARCGLLNWKVPDEEVPHRRDLRKTHRVFSVDPHGCQDIDDAMSIQRLP 595
Query: 539 DGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVD 598
+G +GVHIADVSYFV G+ALD+E + R T+VY++ +++ MLP +LS ++ SL+ D
Sbjct: 596 NGNVELGVHIADVSYFVKHGSALDLEGRRRGTTVYLVGQRLDMLPSVLSADLCSLHENRD 655
Query: 599 RLAFSIFWDLNSAGDVV---DRWIGRTVIRSCCKLSYEHAQDIIDG-KFDVESSNTLG-- 652
R A S+ +L+ + W GRT+IR+C ++YE A ++ G D + S G
Sbjct: 656 RFAVSVMCELDGETYAIIENSTWFGRTIIRNCSSMTYEQAHRLLQGVNADADDSPRRGSA 715
Query: 653 ----------EGWPQLYGQFEWSDVVRS-IKSLYEVSKILKDKRFTDGALRLENSKPVFL 701
EG + ++R ++ L +V + L R + G L L + V
Sbjct: 716 RSQPPPSEHVEGVAGGRIPMKLQQLIREDLRILTDVGRRLGRTRGSQGGLDLSKQEEVRF 775
Query: 702 ---FDEYGTPYDSVLSGREDLNF--LFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNM 756
E G D ++ +E L E M+ AN T A + FP ALLRRHP P+
Sbjct: 776 SLNVSELGQ-EDVEITVKESLEIHGTIAELMIFANSTVARKLVERFPTHALLRRHPPPSG 834
Query: 757 RKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYF 816
+ + + +D +++ QSL A + D +L + A R M A Y
Sbjct: 835 DRFTQLVQLAKARDVVIDATNNFTLQQSLAAAERSGRMDSKTMSLLKSLAVRVMTEAEYV 894
Query: 817 CSGDFK---------DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
SG D T + HY L YTHFTSP+RRY D++VHR L AA+
Sbjct: 895 SSGAVAAVDAASSNGDVTRFAHYGLGLQYYTHFTSPIRRYADVIVHRQLLAAI 947
>gi|254572349|ref|XP_002493284.1| Catalytic component of the exosome, involved in RNA processing and
degradation [Komagataella pastoris GS115]
gi|238033082|emb|CAY71105.1| Catalytic component of the exosome, involved in RNA processing and
degradation [Komagataella pastoris GS115]
gi|328352699|emb|CCA39097.1| exosome complex exonuclease DIS3/RRP44 [Komagataella pastoris CBS
7435]
Length = 958
Score = 248 bits (632), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 176/486 (36%), Positives = 261/486 (53%), Gaps = 44/486 (9%)
Query: 418 KDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILY 477
K +P +++ + + + + M +V A ID+W S P+ H + G + + + A+L
Sbjct: 394 KSMP-AVRIKTRKANDLLNMRIVVA-IDDWPGTSKHPEGHFVRTLGPIEDKDTEQEALLL 451
Query: 478 ENAICCSGFSPESLSCLP--CVPWEVP-----QEELLSRKDLRNFCIFTIDPSTATDLDD 530
E+ + FS L CLP W VP E+L R+DLR+ + +IDP D+DD
Sbjct: 452 EHDVEYRPFSKNVLDCLPKEGHEWIVPVDLSSDEQLKKRRDLRDKLVCSIDPPGCVDIDD 511
Query: 531 ALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEV 590
AL +L +G VGVHIADV++FV P TALD E RSTSVY++ ++I MLP LL ++
Sbjct: 512 ALHARKLPNGNFEVGVHIADVTHFVKPATALDQEGASRSTSVYLVDKRIDMLPTLLGTDL 571
Query: 591 GSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNT 650
SL P VDR +FS+ W+L+ ++++ +++I+S SY+ AQD ID +SSN
Sbjct: 572 CSLKPYVDRFSFSVIWELDEDANIINVDFMKSIIKSREAFSYQDAQDRID-----DSSNN 626
Query: 651 LGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFLFDEYGTPY 709
++ + ++SL +SK LK KR GAL L + + V + E P
Sbjct: 627 --------------DELTQGMRSLLALSKKLKKKRMDAGALNLSSPEVKVHMDSETSDPG 672
Query: 710 DSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH---PAPNMRKLREFEAFC 766
+ + D N L EEFMLLAN + A I AFP A+LRRH P+ N L E
Sbjct: 673 EVEIKKLLDTNSLVEEFMLLANISVARKIYDAFPQIAMLRRHAPPPSTNFEALNEM--LH 730
Query: 767 SKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDT 825
+ G+ + +S SL++ +K D+Y F+ L+ ATR M A YF SG+F
Sbjct: 731 IRKGMTISVENSRALSDSLDRCVDK-NDEY--FNTLVRIMATRCMMAAEYFVSGNFSYQ- 786
Query: 826 DWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR-----RMLPKNNHRE 880
++ HY LA +YTHFTSP+RRY D++ HR L AA+ E L+ R ++ KN +R
Sbjct: 787 EFKHYGLAADIYTHFTSPIRRYCDVLAHRQLAAAIGYEPLHPIQRDKTKMDLIVKNMNRR 846
Query: 881 GVRGRF 886
+F
Sbjct: 847 HRNAQF 852
>gi|395217105|ref|ZP_10401519.1| exoribonuclease II [Pontibacter sp. BAB1700]
gi|394455128|gb|EJF09666.1| exoribonuclease II [Pontibacter sp. BAB1700]
Length = 752
Score = 248 bits (632), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 174/522 (33%), Positives = 261/522 (50%), Gaps = 77/522 (14%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 407
R G VV ++ERS R +VG + +++ F + VPD + +
Sbjct: 170 RAEGIVVEVLERS--RTELVGIMELSKNFGF---------------VVPDFKKL------ 206
Query: 408 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEE-SPFPQAHVLHVFGRGG 466
Y + V ++L + E GD V +I EW +E P V+ VFG G
Sbjct: 207 --YFDVFVGERNLNGA-----EAGDK------VLVKIVEWPKEPGKNPTGEVIRVFGPAG 253
Query: 467 EVEPQINAILYENAICCSGFSPESLSC-LPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
E E +I++I+ E + PE++ + ++P E+ R+D+R+ FTIDP+ A
Sbjct: 254 EHEAEIHSIMAEFGLPFE--FPEAVEEEANQISDKIPAGEIAKRRDMRDVTTFTIDPADA 311
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
D DDALSI++L +G +GVHIADV+++V P + L+ EA R+TSVY++ R IPMLP
Sbjct: 312 KDFDDALSIQKLENGNWEIGVHIADVTHYVHPRSLLEKEAFHRATSVYLVDRTIPMLPER 371
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS + SL P ++ FS+ ++++ G + D W GRTV S + +YE AQ+ I+
Sbjct: 372 LSNGLCSLRPNEEKFTFSVVFEIDDNGKLYDTWYGRTVTYSDRRFAYEEAQERIE----- 426
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEY 705
GEG D I L ++K L+ KRF +GA+ E ++ F DE
Sbjct: 427 -----TGEG-----------DFAEEINVLNNIAKKLQAKRFKNGAISFETTEVKFKLDEN 470
Query: 706 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVI-----ARAFPDSALLRRHPAPNMRKLR 760
G P + R+D + L EEFMLLANK AE + + P + + R H +P+ KL
Sbjct: 471 GKPLSIYVKERKDAHKLIEEFMLLANKKVAEFVYNKGKGKKRP-TMVYRTHGSPDPDKLN 529
Query: 761 EFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGD 820
F F K G ++D G + L +++ +L N A R M A Y +
Sbjct: 530 TFSVFARKFGYKVD--PDGDISEELNNLTHEIEGKPEQ-SVLQNLAIRTMAKAKYSTEPE 586
Query: 821 FKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEA 862
GH+ LAF Y+HFTSP+RRYPD++ HR L L+
Sbjct: 587 -------GHFGLAFDHYSHFTSPIRRYPDMMAHRLLQHYLDG 621
>gi|115450491|ref|NP_001048846.1| Os03g0129200 [Oryza sativa Japonica Group]
gi|23306125|gb|AAN17392.1| Putative mitotic control protein dis3 [Oryza sativa Japonica Group]
gi|108705992|gb|ABF93787.1| RNB-like protein, expressed [Oryza sativa Japonica Group]
gi|113547317|dbj|BAF10760.1| Os03g0129200 [Oryza sativa Japonica Group]
Length = 896
Score = 248 bits (632), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 179/522 (34%), Positives = 258/522 (49%), Gaps = 96/522 (18%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 407
RP GRVV II+R+ W +Y GS + S V ++
Sbjct: 338 RPVGRVVGIIKRN--------------WNSY-CGSLEPMPMPAGSGGVAHALFVS---KD 379
Query: 408 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 467
+ PK+ + + L + + KR+ +VA +D W+ S +P H +
Sbjct: 380 RRIPKIRIQTRQLGNLLDKRI----------IVA--VDSWDVLSRYPSGHYV-------- 419
Query: 468 VEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLS--RKDLRNFCIFTIDPSTA 525
+L EN I FS + L+CLP +PW + E+L + R+DLR+ +F++DP
Sbjct: 420 -------VLIENDINTRPFSTQVLACLPPLPWTLSPEDLANPNRQDLRHVRVFSVDPPD- 471
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
IADV+ FV PGT LD EA R TSVY++ ++I MLP
Sbjct: 472 ----------------------IADVTNFVHPGTPLDEEASQRGTSVYLVGQRIDMLPKP 509
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
L+E+V SL V+RLAFS+ W++ D++ ++VI+SC +SY AQ +D V
Sbjct: 510 LTEDVCSLRADVERLAFSVIWEMTPHADIISTRYTKSVIKSCAAMSYVEAQARMDDSRLV 569
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
+ + +++L ++KI++ +R GAL L +++ F D E
Sbjct: 570 DP-------------------LTVDLRNLNSLAKIMRHRRCERGALTLASAEVKFEIDSE 610
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + + N + EEFML AN + AE I + FP +LLRRHP+P L
Sbjct: 611 THDPLDIGIYQIREANQMIEEFMLAANISVAEKILKHFPLCSLLRRHPSPTKEMLEPLLR 670
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKD 823
S GL LD SSS +SL+ A K+D F+ LI ATR M A YFCSGD
Sbjct: 671 TASSVGLNLDVSSSKALAESLDNA----KNDDPYFNKLIRILATRCMTQAVYFCSGDLT- 725
Query: 824 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 865
+++ HY LA +YTHFTSP+RRY D++VHR L AALE KL
Sbjct: 726 FSEYYHYGLAASLYTHFTSPIRRYADVIVHRLLAAALEIAKL 767
Score = 46.2 bits (108), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
I++ H M + L G + RVN +N EAY E + +++I G + NRA +G
Sbjct: 217 IYSEHKPMSEITAGLRCGIYHQGKLRVNRYNPFEAYVGSESIGDEIVIHGRSNMNRAFDG 276
Query: 219 DFVLIKVDRLSLWAKMKGF 237
D V +++ W + K F
Sbjct: 277 DIVAVELLPQDQWHESKSF 295
>gi|294806194|ref|ZP_06765041.1| ribonuclease R [Bacteroides xylanisolvens SD CC 1b]
gi|294446450|gb|EFG15070.1| ribonuclease R [Bacteroides xylanisolvens SD CC 1b]
Length = 703
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 151/435 (34%), Positives = 227/435 (52%), Gaps = 53/435 (12%)
Query: 442 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWE 500
++ EW +++ P ++ + G+ G+ +++AIL E + P+++ + +P E
Sbjct: 181 VKVTEWPDKAKNPIGQIIDILGQAGDNTTEMHAILAEFGLPY--VYPKAVETAADKIPAE 238
Query: 501 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 560
+ EE+ R+D R FTIDP A D DDALSI +L DG+ VGVHIADV+++V G
Sbjct: 239 ISAEEIAKREDFRKVTTFTIDPKDAKDFDDALSIRKLKDGLWEVGVHIADVTHYVKEGGI 298
Query: 561 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIG 620
+D EA+ R+TSVY++ R IPMLP L + SL P ++LAFS+ +D+ G++ D I
Sbjct: 299 IDKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPNEEKLAFSVIFDITEKGEIKDSRIV 358
Query: 621 RTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKI 680
TVI S + +YE AQ II+ K EG D + +L ++K
Sbjct: 359 HTVINSDRRFTYEEAQQIIETK----------EG-----------DFKEEVLTLDTIAKA 397
Query: 681 LKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVI-- 738
L++KRF+ GA+ + + F DE G P +D N L EEFMLLANKT AE I
Sbjct: 398 LREKRFSAGAINFDRYEVKFEIDEKGKPISVYFKESKDANKLVEEFMLLANKTVAEKIGC 457
Query: 739 ------ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQ 787
A+ P R H P+ KL F ++ G ++ TS S + L+
Sbjct: 458 VPKNKKAKVLP----YRIHDLPDPEKLENLSQFIARFGYKVRTSGTKTDISKSINHLLDD 513
Query: 788 AREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRY 847
K ++ +++ + R MQ A Y + GHY LAF YTHFTSP+RR+
Sbjct: 514 IHGKKEE-----NLIETVSIRAMQKARYSTH-------NIGHYGLAFEYYTHFTSPIRRF 561
Query: 848 PDLVVHRTLNAALEA 862
PD++VHR + ++
Sbjct: 562 PDMMVHRLVTKYMDG 576
>gi|357114234|ref|XP_003558905.1| PREDICTED: exosome complex exonuclease RRP44-like isoform 2
[Brachypodium distachyon]
Length = 896
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 172/521 (33%), Positives = 256/521 (49%), Gaps = 94/521 (18%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 407
RP GR+V II+R+ W +Y GS + S V ++
Sbjct: 338 RPVGRIVGIIKRN--------------WNSY-CGSLEPMPMPAGSGGVAHALFVS---KD 379
Query: 408 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 467
+ PK+ + + L + + KR + +D W+ S +P H +
Sbjct: 380 RRIPKIRIQTRQLGNLLNKR------------IVVAVDSWDVLSRYPSGHYV-------- 419
Query: 468 VEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLS--RKDLRNFCIFTIDPSTA 525
+L EN I FS + L+CLP +PW + ++L + R+DLR+ +F++DP
Sbjct: 420 -------VLIENDINTRPFSTQVLACLPPLPWSLSPDDLANPNRQDLRHVRVFSVDPP-- 470
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
IADV+ FVLPGT LD EA R+TSVY++ ++I MLP
Sbjct: 471 ---------------------DIADVTNFVLPGTPLDEEASQRATSVYLVGQRIDMLPKP 509
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
L+E+V SL V+RLAFS+ W++ D++ ++VI+SC +SY AQ +D V
Sbjct: 510 LTEDVCSLRADVERLAFSVIWEMTPDADIISSRYTKSVIKSCAAMSYVEAQARMDDSRLV 569
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
+ + +++L ++KI++++R GAL L +++ F D E
Sbjct: 570 DP-------------------LTVDLRNLNSLAKIMRNRRCERGALTLASAEVKFEIDSE 610
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + + N + EEFML AN + AE I + +P +LLRRHP+P L
Sbjct: 611 THDPLDIGIYQIREANQMIEEFMLAANVSVAEKILKHYPLCSLLRRHPSPTKEMLEPLLR 670
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 824
S GL LD SSS SL+ A+ +DD ++ ATR M A YFCSGD
Sbjct: 671 TASSVGLNLDVSSSKALADSLDNAK---RDDPYFNKLIRILATRCMTQAVYFCSGDLS-L 726
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 865
+++ HY LA +YTHFTSP+RRY D+VVHR L AAL+ KL
Sbjct: 727 SEYYHYGLASALYTHFTSPIRRYADVVVHRLLAAALDIAKL 767
Score = 47.4 bits (111), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R I++ H M + L G + RVN +N EAY E + +++I G + NRA
Sbjct: 214 RKVIYSEHKPMSEITSGLRCGIFHQGKLRVNRYNPFEAYVGSESIGDEIIIRGRSNMNRA 273
Query: 216 VEGDFVLIKVDRLSLWAKMKGF 237
+GD V +++ W + K F
Sbjct: 274 FDGDIVAVELLPQDQWNESKSF 295
>gi|393244997|gb|EJD52508.1| RNB-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 983
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 164/452 (36%), Positives = 228/452 (50%), Gaps = 35/452 (7%)
Query: 427 RLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSG 485
RL G A ++ + + ID W S +P+ H + G E + ++L E +
Sbjct: 417 RLRTGQAPSLLGQKILVAIDRWEPTSKYPEGHFVRALGTVESKEAETESLLLEFDVPYRP 476
Query: 486 FSPESLSCLPCV--PWEVP-----QEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLS 538
F L+CLP W VP + E R+DLR + +IDP D+DDAL L
Sbjct: 477 FGKAILNCLPPEGDTWVVPPKDSARPEWRDREDLRELLVCSIDPPKCQDIDDALHARPLP 536
Query: 539 DGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVD 598
+G GVHIADVS+FVLP +D EA R T+VY++ ++I MLP LL + SL P V+
Sbjct: 537 NGNIEAGVHIADVSHFVLPDNPMDSEAAARGTTVYLVDKRIDMLPSLLGTNLCSLRPHVE 596
Query: 599 RLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQL 658
RLAFS+ W+L++ ++V ++VI S +YE AQ D P +
Sbjct: 597 RLAFSVIWELDTNAEIVKVRFTKSVIASKQAFTYEEAQIWKDD--------------PNM 642
Query: 659 YGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD--EYGTPYDSVLSGR 716
D+ +SI+ L ++ LK KR GAL L + + D E P D
Sbjct: 643 Q-----DDLTKSIRLLNSLAIKLKAKRMAAGALNLASPEVKIHMDSAESSDPVDVEQKEL 697
Query: 717 EDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH-PAPNMRKLREFEAFCSKHGLQLDT 775
+ N L EEFMLLAN + A FP A+LRRH P P + + + G+ LD
Sbjct: 698 RETNSLVEEFMLLANISVAAKNQETFPQIAVLRRHLPPPKASFEKLQDVLMKRRGMTLDV 757
Query: 776 SSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAF 834
SSSG QSL++ + F+ L+ ATR M A YF SG DT +GHY LA
Sbjct: 758 SSSGALAQSLDKC---IDPKEPAFNTLVRIMATRCMLPAEYFVSGSVPRDT-FGHYGLAS 813
Query: 835 PVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
P+YTHFTSP+RRY D++ HR L A++ L+
Sbjct: 814 PIYTHFTSPIRRYADVLAHRQLAASIGYSSLH 845
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 39/85 (45%)
Query: 141 AYTNKDDNPSHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGV 200
A T D P+ AR ++ + A+ ++ G ++ + N +N LE +
Sbjct: 223 ASTQDDVEPTATQAARTALYPEYLPTAALIAGVKAGQLYQGYFNANQYNYLEGSVNVPAF 282
Query: 201 QTDVLITGIAAQNRAVEGDFVLIKV 225
+L+ G NRAV+GD V ++V
Sbjct: 283 SQPILLVGRENMNRAVQGDVVAVEV 307
>gi|255693553|ref|ZP_05417228.1| ribonuclease R [Bacteroides finegoldii DSM 17565]
gi|260620618|gb|EEX43489.1| ribonuclease R [Bacteroides finegoldii DSM 17565]
Length = 718
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 151/431 (35%), Positives = 223/431 (51%), Gaps = 45/431 (10%)
Query: 442 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWE 500
+I EW +++ P V+ + G+ G+ +++AIL E + P+++ + +P E
Sbjct: 196 VKITEWPDKAKNPIGQVIDILGKAGDNTTEMHAILAEFGLPY--VYPKAVETAADKIPAE 253
Query: 501 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 560
+ EE+ R+D R FTIDP A D DDALSI + +G+ VGVHIADV+++V G
Sbjct: 254 ITPEEIAKREDFRKVTTFTIDPKDAKDFDDALSIRSIKNGLWEVGVHIADVTHYVKEGGI 313
Query: 561 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIG 620
+D EA+ R+TSVY++ R IPMLP L + SL P ++LAFS+ +D+ G++ D I
Sbjct: 314 IDKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPNEEKLAFSVIFDITEKGEIKDSRIA 373
Query: 621 RTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKI 680
TVI S + +YE AQ II+ K EG D + L ++K
Sbjct: 374 HTVINSDRRFTYEEAQQIIETK----------EG-----------DYKEEVLMLDTIAKA 412
Query: 681 LKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR 740
L++KRF GA+ + + F DE G P +D N L EEFMLLANKT AE I R
Sbjct: 413 LREKRFAAGAINFDRYEVKFEIDEKGKPISVYFKESKDANKLVEEFMLLANKTVAEKIGR 472
Query: 741 A----FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREK 791
P R H P+ KL F ++ G ++ TS S + L+ K
Sbjct: 473 VPKNKKPKVLPYRIHDLPDPEKLENLSQFIARFGYKVRTSGTKTDISKSINHLLDDIHGK 532
Query: 792 LKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 851
++ +++ + R MQ A Y + GHY LAF YTHFTSP+RR+PD++
Sbjct: 533 KEE-----NLIETVSIRAMQKARYSTH-------NIGHYGLAFDYYTHFTSPIRRFPDMM 580
Query: 852 VHRTLNAALEA 862
VHR + ++
Sbjct: 581 VHRLVTKYMDG 591
>gi|429328280|gb|AFZ80040.1| hypothetical protein BEWA_028900 [Babesia equi]
Length = 892
Score = 247 bits (630), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 156/442 (35%), Positives = 228/442 (51%), Gaps = 39/442 (8%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 499
+ D W+ S P H + + G + + + IL E+ + F E+ LP W
Sbjct: 363 IVVNFDSWDRFSKRPSGHWVEILGPIDDRDVESAVILKEHQVKTEDFPLEAYKELPEQDW 422
Query: 500 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 559
++P +E R D C+F++DP D+DDAL +RL DG VHIADV+YFV PG+
Sbjct: 423 KIPDDERAKRMDYTKACLFSVDPPGCKDIDDALGFKRLKDGSMEFSVHIADVTYFVKPGS 482
Query: 560 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 619
LD EA R T+VY++ R+ MLP LL+ ++ SL P +RLAFS+ +N +G +++
Sbjct: 483 HLDQEASERCTTVYLVDRRTDMLPSLLTTDLCSLVPERERLAFSVICRMNESGAILETKF 542
Query: 620 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 679
G++VIRS +Y+ AQD+ID + E S L K + ++K
Sbjct: 543 GKSVIRSVRAFTYKEAQDLIDANGNDEISVAL--------------------KEMNAMAK 582
Query: 680 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGR-EDLNFLFEEFMLLANKTAAEVI 738
L++ RF GA+ L +S F FD +V S + D N + EEFMLLAN A I
Sbjct: 583 KLREMRFKRGAIELGSSDVKFEFD--AVTVSNVESYKIYDTNKMIEEFMLLANVMVASKI 640
Query: 739 ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDT-SSSGQFHQSLEQAREKLKDDYV 797
+FP S LLRRHP P +L + + + G+ + +S + ++SL++ + KD
Sbjct: 641 HASFPKSCLLRRHPPPAEERLEDLKRLLEEKGINFFSFGNSKELNESLQKLTKFPKDFLN 700
Query: 798 LFDILINYATRPMQ-----------LASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRR 846
IL TR M A Y S D + + + HY L +YTHFTSP+RR
Sbjct: 701 AAQIL---TTRCMSQVGHLPSPHSPQAIYINSSDLELEQ-FKHYGLCTDLYTHFTSPIRR 756
Query: 847 YPDLVVHRTLNAALEAEKLYWK 868
Y D+VVHR L A LE E + W+
Sbjct: 757 YADVVVHRLLAACLEIESMDWR 778
>gi|41581219|emb|CAE47868.1| protein phosphatase ssd1 homologue, putative [Aspergillus fumigatus]
Length = 1388
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 203/731 (27%), Positives = 330/731 (45%), Gaps = 84/731 (11%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R +F P+ + L G + RVN NR +AY + D+ I G +NRA
Sbjct: 428 RKTLFTPYLPQANLPALLSNGQLVAGILRVNKKNRSDAYVTTPDLDADIFICGSKDRNRA 487
Query: 216 VEGDFVLIKV-DRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYS 274
+EGDFV +++ D +W++ K + D++ S
Sbjct: 488 LEGDFVAVELLDVDEVWSQKKEKEEKKK-----------------------RKDITDARS 524
Query: 275 NCTLLSEKGIHHDDDSSSEAYNQEM-----IEREGYNYINGHHPSTSDSTEKVSSSQQND 329
T ++K DS++ QE+ I R G T+K + + +
Sbjct: 525 GSTAGTDK--LSRSDSAANGDRQEIGPDGSIRRRGS--------LRQRPTQKKNDDVEVE 574
Query: 330 GMNAIERLSAMISSYPTKRPTGRVVSIIERSPRR--DGIVGFLN-VNQWFNYKGGSRKDA 386
G + + IS G +V++IER + G +G L +Q K + + A
Sbjct: 575 GQSLLLVEEDEISDEQKPLYAGHIVAVIERIAGQMFSGTLGLLRPSSQATKEKQEAERQA 634
Query: 387 KKNRSSLSVPDRE-----YIQLTPTHPKYPKMVVLVKDLP-DSIKKRLEEGDATIEMELV 440
++ S+ DR+ + PT + P + + + P D ++K E + +
Sbjct: 635 REGGSARQQHDRQQEKPKIVWFKPTDKRVPLIAIPTEQAPRDFVEKHQEYAN-----RIF 689
Query: 441 AARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWE 500
A I W S P ++ G G+++ + +A+L +N FS L + W
Sbjct: 690 VACIKRWPITSLHPFGTLVEQLGEMGDLKVETDALLRDNNFGADEFSDAVLKSIGWEDWS 749
Query: 501 VPQEE---LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLP 557
V E L SR+D R+ FTIDPS A +LD+A I+ L+DG +G+H++D+++FV
Sbjct: 750 VSSEGDALLESRRDFRSETTFTIDPSGAIELDNAYHIKPLADGKVEIGIHVSDIAHFVKA 809
Query: 558 GTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR 617
+ +D EA+ R T+VY++ R + MLP +S E+ SL P DRL S+ + N VD
Sbjct: 810 NSLVDREAKKRGTAVYLMDRLVNMLPRRVSTELCSLLPEQDRLTVSVVFTANPETGAVDD 869
Query: 618 --WIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 675
WIG+++I+S +LSY+ +I G+ +V + I++L
Sbjct: 870 DVWIGKSIIKSAGRLSYDEVNSVIKGETNVSVAGI----------------SANIIQTLN 913
Query: 676 EVSKILKDKRFTDGALRLENSKPVFL---FDEYGTPYDSVLSGREDLNFLFEEFMLLANK 732
+++ ++ RF + R+ N P+ L D+ P + + D L EE AN
Sbjct: 914 TITRKFREARFGN---RVSNPPPLRLLYQLDDENVPVERNIFDSTDARELVEELRHKANF 970
Query: 733 TAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAR-EK 791
A + A PD A LRR P+PN R+L F ++ G D SSSG SL + + +
Sbjct: 971 FVARKLVSAMPDKAFLRRQPSPNSRRLHSFIDRMNRLGYDFDPSSSGTLQSSLCKVQDDD 1030
Query: 792 LKDDYVLFDILINYA--TRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPD 849
L+ VL L++ ++ A Y+ + +D+ HY L PVYTHFT+P RRY D
Sbjct: 1031 LRKVRVLLRTLLHSTDILTGIRRAKYYVASTVQDEQRH-HYTLNLPVYTHFTNPSRRYAD 1089
Query: 850 LVVHRTLNAAL 860
++VHR L A L
Sbjct: 1090 IIVHRQLEAVL 1100
>gi|399022619|ref|ZP_10724691.1| ribonuclease R [Chryseobacterium sp. CF314]
gi|398084455|gb|EJL75140.1| ribonuclease R [Chryseobacterium sp. CF314]
Length = 716
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 154/431 (35%), Positives = 221/431 (51%), Gaps = 37/431 (8%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 499
V ++ EW P+ ++ V G GE E +I++IL E + F E +
Sbjct: 193 VIVKMTEWKPGDKNPEGEIIQVLGAPGEHETEIHSILAEYGLPYQ-FPEEVEKDADKIDR 251
Query: 500 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 559
+ EE+ R D+R FTIDP A D DDALSI +L +G +GVHIADVS++V+PGT
Sbjct: 252 RITDEEVAKRWDMREITTFTIDPKDAKDFDDALSIRKLENGNWEIGVHIADVSHYVIPGT 311
Query: 560 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 619
LD EA R+TSVY++ R +PMLP +LS +V SL P D+ FS ++LN +V +W
Sbjct: 312 LLDDEAYDRATSVYLVDRVVPMLPEVLSNDVCSLRPNEDKYTFSAVFELNDNAEVQKQWF 371
Query: 620 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 679
GRTVI S + +YE AQ+ I+ K EG D I L ++K
Sbjct: 372 GRTVIHSDRRFTYEEAQERIETK----------EG-----------DYAEEILVLDRLAK 410
Query: 680 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 739
I++ +R GA+ + S+ F DE P +D N L EEFMLLAN+ +E ++
Sbjct: 411 IMRAERIRKGAITFDRSEVRFSLDENNEPVGVYFKISKDSNHLIEEFMLLANRKVSEFVS 470
Query: 740 -----RAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 794
++ + R H P+ KL F S G ++D +++ + +SL + +K
Sbjct: 471 LSRRGEISNNTFIYRVHDDPDPAKLEALRDFVSTFGYKMDLANTKKVAESLNRLLHDVKG 530
Query: 795 DYVLFDILINYATRPMQLASYFCSGDFKDDTD-WGHYALAFPVYTHFTSPLRRYPDLVVH 853
+++ A R M A Y TD GHY L F Y+HFTSP+RRYPDL+ H
Sbjct: 531 KGEE-NMIETLAMRSMSKAVY--------STDPIGHYGLGFEYYSHFTSPIRRYPDLIAH 581
Query: 854 RTLNAALEAEK 864
R L L+ K
Sbjct: 582 RLLQHYLDGGK 592
>gi|357061128|ref|ZP_09121888.1| ribonuclease R [Alloprevotella rava F0323]
gi|355375145|gb|EHG22435.1| ribonuclease R [Alloprevotella rava F0323]
Length = 779
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 168/474 (35%), Positives = 240/474 (50%), Gaps = 57/474 (12%)
Query: 424 IKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICC 483
I K+ +G T + +V +I EW +S P V+ + G GE ++ AIL E +
Sbjct: 159 IPKKFLKGGKTGDKAVV--KIVEWPHDSKSPIGKVVDILGHQGENNAEMCAILAEYNLPY 216
Query: 484 SGFSPESLSCLPC-VPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLS---- 538
S PE + +P E+P EE+ R+D R+ FTIDP A D DDA+SI R+S
Sbjct: 217 S--YPEKVELAANNIPVEIPAEEIKRREDFRDAVTFTIDPRDAKDFDDAISIRRISGKGL 274
Query: 539 ------------DGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 586
+ VGVHIADVSY+V G +D EA R+TSVY++ R IPMLP L
Sbjct: 275 PLSTARPKTTSSKAVWEVGVHIADVSYYVKEGDTIDREAYNRATSVYLVDRTIPMLPEKL 334
Query: 587 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 646
++ SL +++A+S + +N G+V+D + TVIRS + +YE Q I++ +
Sbjct: 335 CNQLCSLRQDEEKVAYSTIFHINERGEVLDWHLAHTVIRSNRRFTYEEVQYILEHNGEAS 394
Query: 647 SSN---------TLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 697
+++ L EG P L G+F VV L ++K+L+DKRF +GA+ + +
Sbjct: 395 AADLQTPGEHPEVLPEGTP-LTGEFAEELVV-----LNRLAKLLRDKRFKNGAIGFDRPE 448
Query: 698 PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAF----PDSALLRRHPA 753
F D+ G P + L D N L EEFMLLAN++ AE I + P + + R H
Sbjct: 449 VRFEIDDKGHPVSTYLKIARDANKLVEEFMLLANRSVAERIGKVARGKKPKTFVYRIHDI 508
Query: 754 PNMRKLREFEAFCSKHGLQLDTSSSGQ-----FHQSLEQAREKLKDDYVLFDILINYATR 808
P+ KL + F + G +L T S Q +Q LE + +++ V A R
Sbjct: 509 PDPEKLEKLNGFIGRFGYKLRTEGSKQEVSKSLNQLLEDVHNRPEENMVEM-----VALR 563
Query: 809 PMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEA 862
M A Y + GHY L F YTHFTSP+RRYPDL+VHR L E
Sbjct: 564 AMMKARYSIH-------NIGHYGLMFDYYTHFTSPIRRYPDLMVHRLLTRYAEG 610
>gi|333382728|ref|ZP_08474394.1| ribonuclease R [Dysgonomonas gadei ATCC BAA-286]
gi|332828329|gb|EGK01038.1| ribonuclease R [Dysgonomonas gadei ATCC BAA-286]
Length = 716
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 153/429 (35%), Positives = 222/429 (51%), Gaps = 45/429 (10%)
Query: 444 IDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC-VPWEVP 502
I EW +++ P VL + G+ GE ++NAIL E + PE + +P E+
Sbjct: 196 IVEWPQKAKNPIGKVLDILGQAGENNTEMNAILAEFGLPYK--YPEKIEAFANKIPDEIT 253
Query: 503 QEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALD 562
EE+ R+D RN FTIDP A D DDALSI+++ +G VGVHIADV+++V G +D
Sbjct: 254 PEEIAKREDFRNTLTFTIDPRDAKDFDDALSIKQIKNGRWEVGVHIADVTHYVQEGDIID 313
Query: 563 IEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRT 622
E + R+TS+Y++ R IPMLP LS + SL P D+L +S ++L+ ++ I RT
Sbjct: 314 KEGESRATSIYLVDRTIPMLPERLSNGLCSLRPHEDKLCYSAIFELDDDANIKKSRIART 373
Query: 623 VIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILK 682
VI S + +YE AQDII+ GEG D I L +++K L+
Sbjct: 374 VIHSDRRFTYEEAQDIIE----------TGEG-----------DYKDEILKLNDLAKKLR 412
Query: 683 DKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAF 742
KRF +GA+ + + F DE G P +D N L EEFMLLAN+T AE I
Sbjct: 413 GKRFDNGAIAFDRHEVRFEIDEKGKPISVYFKYAKDSNKLIEEFMLLANRTVAEFIGNVP 472
Query: 743 PD----SALLRRHPAPNMRKLREFEAFCSKHGLQL-----DTSSSGQFHQSLEQAREKLK 793
+ + + R H PN K+ F + G ++ T+ S + L++ K +
Sbjct: 473 KNKNAKTFVYRIHDLPNAEKMENLSEFIRRFGYKIKVDGSKTNVSKSINHLLDEVSGKPE 532
Query: 794 DDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVH 853
+ +++ A R M A Y + GHY LAF YTHFTSP+RRYPD++VH
Sbjct: 533 E-----NLISTIAIRAMAKAIYST-------VNIGHYGLAFEYYTHFTSPIRRYPDMMVH 580
Query: 854 RTLNAALEA 862
R L ++
Sbjct: 581 RLLTRYMDG 589
>gi|408673906|ref|YP_006873654.1| ribonuclease R [Emticicia oligotrophica DSM 17448]
gi|387855530|gb|AFK03627.1| ribonuclease R [Emticicia oligotrophica DSM 17448]
Length = 792
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 172/530 (32%), Positives = 250/530 (47%), Gaps = 69/530 (13%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
P G ++ IIER R IVG + + NY +L PD + + P
Sbjct: 133 PEGAIIEIIERG--RKEIVG--KIQTFGNY-------------ALVHPDHKNLHDDIFVP 175
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
K D IK + +LV RI + V+ + G+ GE
Sbjct: 176 K------------DKIK-------GATKDDLVIVRILTYPTNVQQGTGEVIEILGKSGEN 216
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDL 528
+++AIL E + F + + +EE+ R+D RN FTIDP A D
Sbjct: 217 NAEMHAILAEFGLPIR-FDKAIEEEAAAISEVITEEEIKKRRDFRNILTFTIDPHDAKDF 275
Query: 529 DDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSE 588
DDALS L + +GVHIADV+++V GT L+ EA R+TSVY++ R IPMLP LS
Sbjct: 276 DDALSFRVLENHNFEIGVHIADVTHYVREGTRLEEEAYNRATSVYLVDRTIPMLPEKLSN 335
Query: 589 EVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESS 648
+ SL P D+L FS +++ G V+ W GRT+I S + +YE AQ++++
Sbjct: 336 NLCSLRPNEDKLTFSAVFEMTHDGRVISEWFGRTIIHSDKRFTYEEAQEVLE-------- 387
Query: 649 NTLGEGWPQLYGQFEWSDVVR-SIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGT 707
N G+ + E + R + +L ++KILK +RF +GA+ E ++ F DE G
Sbjct: 388 NEEGDVLNPITEPNEILEKYRFPLHTLNHLAKILKKERFRNGAINFETNEVKFKLDETGK 447
Query: 708 PYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR---------------AFPDSALLRRHP 752
P VL R+D + L EEFMLLANK AE + + + + R H
Sbjct: 448 PLGVVLKIRKDAHKLIEEFMLLANKKVAEFVFKLGGKKQGKQSEESQTQHSTTMVYRVHE 507
Query: 753 APNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQL 812
PN KL+ F F + G + T S S+ + +++ V ++L A R M
Sbjct: 508 PPNPEKLQNFANFAGRFGFSIRTDSDKSLSNSMNKMMSEVEGTPVQ-NVLEQLAVRTMSK 566
Query: 813 ASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEA 862
A Y GH+ LAF Y+HFTSP+RRYPD++ HR L+ L A
Sbjct: 567 ARYTTES-------LGHFGLAFDHYSHFTSPIRRYPDMMAHRLLHHYLTA 609
>gi|299747393|ref|XP_002911164.1| mitotic control protein dis3 [Coprinopsis cinerea okayama7#130]
gi|298407498|gb|EFI27670.1| mitotic control protein dis3 [Coprinopsis cinerea okayama7#130]
Length = 1002
Score = 246 bits (629), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 170/450 (37%), Positives = 232/450 (51%), Gaps = 39/450 (8%)
Query: 424 IKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICC 483
I+ R + + + +++ + ID W S +P+ H + G+ E + ++L E +
Sbjct: 429 IRLRTRQAPSLVGQKILVS-IDRWEVTSRYPEGHFVRALGKVESKEAEQESLLLEFDVPY 487
Query: 484 SGFSPESLSCLP--CVPWEVPQEE-----LLSRKDLRNFCIFTIDPSTATDLDDALSIER 536
F L CLP W VP ++ R+DLR I +IDP D+DDAL +
Sbjct: 488 RPFGKAILDCLPKEGDQWVVPPKDDSHPDWRGREDLRYLNICSIDPPGCQDIDDALHARK 547
Query: 537 LSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPG 596
L +G GVHIADVS+FVLP T +D EA R T+VY++ ++I MLP LL + SL P
Sbjct: 548 LPNGNIEAGVHIADVSHFVLPDTPMDNEAASRGTTVYLVDKRIDMLPALLGTNLCSLRPF 607
Query: 597 VDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWP 656
V+RLAFS W+L D+V ++VI S +YE AQ D K L +
Sbjct: 608 VERLAFSTIWELTPEADIVSVRFFKSVIASKAAFTYEEAQIRKDDK-------NLKD--- 657
Query: 657 QLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD--EYGTPYDSVLS 714
D+ SI+ L ++ LK KR GAL L + + D E P D
Sbjct: 658 ---------DITESIRLLNHLAIKLKGKRMAAGALNLASPEVKIHLDSSESSDPIDVEQK 708
Query: 715 GREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH---PAPNMRKLREFEAFCSKHGL 771
+ N L EEFMLLAN + A+ I FP +A+LRRH P N KL++ + GL
Sbjct: 709 ELRETNSLVEEFMLLANISVAKKIQETFPQTAVLRRHLSPPKTNFEKLQDI--LLKRKGL 766
Query: 772 QLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHY 830
LD SSSG SL+ + D F+ L+ ATR M A YFCSG DT +GHY
Sbjct: 767 NLDVSSSGALASSLDNC---VDPDEPAFNTLVRIMATRCMLSAEYFCSGSVSKDT-FGHY 822
Query: 831 ALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
LA P+YTHFTSP+RRY D++ HR L AA+
Sbjct: 823 GLATPIYTHFTSPIRRYSDVLAHRQLAAAI 852
>gi|340620788|ref|YP_004739239.1| VacB protein-like protein [Capnocytophaga canimorsus Cc5]
gi|339901053|gb|AEK22132.1| VacB protein-like protein [Capnocytophaga canimorsus Cc5]
Length = 737
Score = 246 bits (628), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 172/524 (32%), Positives = 254/524 (48%), Gaps = 62/524 (11%)
Query: 351 GRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT-HPK 409
G V IIER R VG + + + F + + PT H
Sbjct: 137 GEVTKIIERKKMR--FVGVVQMQKNFAF------------------------VLPTDHRM 170
Query: 410 YPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVE 469
Y + V D+ + E GD I RI++W +S P + + G+ GE
Sbjct: 171 YTDIFVSKNDINGA-----ENGDKVI------VRIEKWEGKSNSPFGVIEQILGKPGEQS 219
Query: 470 PQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLD 529
++++IL E + F E + + + +EE+ R+D+RN FTIDP A D D
Sbjct: 220 TEMHSILAEYGLPYE-FPHEVEAFAKQLDTSITEEEIAKRRDMRNVLTFTIDPKDAKDFD 278
Query: 530 DALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEE 589
DALS + L +G +GVHIADVS++V GT LD EA R+TSVY++ R +PMLP +LS
Sbjct: 279 DALSFQILENGNYEIGVHIADVSHYVQEGTILDEEAYNRATSVYLVDRVVPMLPEVLSNF 338
Query: 590 VGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDG-------- 641
SL P ++ FS +++N ++++ W GRTV S + +YE AQ+II+
Sbjct: 339 ACSLRPNEEKYTFSAVFEMNKKAEILNTWFGRTVTLSDHRFAYEEAQEIIENFAGVGEKQ 398
Query: 642 -KFDVESSNTLGEGWPQLYGQFEW-SDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPV 699
K ++ E + G + +VV++I + +++K L+ KR GA+ + +
Sbjct: 399 EKVEISDFQMPSEISIRKEGSYSVPKEVVQAILLMDDLAKKLRIKRMRLGAISFDKIEVK 458
Query: 700 FLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKL 759
F DE P +D N L EEFMLLAN+ AE IA+ + + R H P+ KL
Sbjct: 459 FHLDENDNPTHVYFKESKDANKLIEEFMLLANRKVAEFIAKQ-KKTFVYRVHDEPDDEKL 517
Query: 760 REFEAFCSKHGLQLDTSSSGQFHQSLEQAREKL--KDDYVLFDILINYATRPMQLASYFC 817
+ S+ G ++ SL E++ K + L D L A R M ASY
Sbjct: 518 MQLNGVISRFGYGINMKDRKSITHSLNSLLEEVKGKKEQNLVDTL---AIRSMAKASYST 574
Query: 818 SGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 861
+ GHY LAF YTHFTSP+RRYPD++VHR L L+
Sbjct: 575 E-------NIGHYGLAFDFYTHFTSPIRRYPDVMVHRLLQKYLD 611
>gi|224000053|ref|XP_002289699.1| ribonuclease [Thalassiosira pseudonana CCMP1335]
gi|220974907|gb|EED93236.1| ribonuclease [Thalassiosira pseudonana CCMP1335]
Length = 600
Score = 246 bits (628), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 154/388 (39%), Positives = 216/388 (55%), Gaps = 33/388 (8%)
Query: 499 WEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPG 558
W+ +E R+D R+ +FTIDP+TA DLDDAL + +L DG +GVHIADVS+FV P
Sbjct: 132 WKPTEEMCRGRRDYRSHRVFTIDPTTARDLDDALHVTQLPDGRVEIGVHIADVSHFVQPS 191
Query: 559 TALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV--- 615
+A+D EA R+T+VY++ R IPMLP L E SLN V+RLAFS+ W +N G +
Sbjct: 192 SAVDEEALRRATTVYLVDRVIPMLPRPLCEIACSLNENVERLAFSVVWRMNMDGTLSKKK 251
Query: 616 ---------DRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEG----WP---QLY 659
D W GRTVI+SC +L Y AQ+IID K V ++N E WP Q
Sbjct: 252 GSAEKCKEDDIWYGRTVIKSCARLDYATAQNIIDNK--VAAANGESEVDETLWPKSRQPT 309
Query: 660 GQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYG-TPYDSVLSGRED 718
G ++V ++ +++V+ + RF +GAL L K F ++ G TP D
Sbjct: 310 GGHTIAEVAADVRLMHQVAMKRRKLRFENGALALNGIKLTFQLEDDGETPKLCAPYPIRD 369
Query: 719 LNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAP---NMRKLREF--EAFCSKHGLQL 773
N L EE+MLLAN A+ + ALLR+H P M+ + + E+F +
Sbjct: 370 SNRLIEEYMLLANFLVAQRLITHAKGRALLRQHSPPLEAGMQNVVDVSKESF----DFDI 425
Query: 774 DTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALA 833
D +SS +SL + D+ V+ + + T PM+ A Y +G+ D+ DW H+AL
Sbjct: 426 DITSSKTLQESLSRLSRTCDDELVIQCVTESLMT-PMRPAEYIAAGEVNDE-DWQHFALN 483
Query: 834 FPVYTHFTSPLRRYPDLVVHRTLNAALE 861
P YTHFTSP+RRY D++VHR L A L+
Sbjct: 484 IPYYTHFTSPIRRYADVIVHRLLQATLD 511
>gi|375012907|ref|YP_004989895.1| ribonuclease R [Owenweeksia hongkongensis DSM 17368]
gi|359348831|gb|AEV33250.1| ribonuclease R [Owenweeksia hongkongensis DSM 17368]
Length = 715
Score = 246 bits (628), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 167/521 (32%), Positives = 251/521 (48%), Gaps = 71/521 (13%)
Query: 347 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 406
K+P G V IIER+ + VG + +++ + + L P
Sbjct: 132 KKPEGEVAEIIERA--KTEFVGIIEMSKNYGF------------------------LVPD 165
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 466
+ K + + K+L + K GD I A+I +W E + P V V GR G
Sbjct: 166 NKKMLVDLYIHKELLNGAK----HGDKAI------AKITDWPEHASSPFGEVTEVLGRPG 215
Query: 467 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 526
+ +I++IL E + F + V E+ +EE+ R+D R+ FTIDP A
Sbjct: 216 DHNVEIHSILAEYGLPRE-FPKLVENEAAKVAEEISKEEIAKRRDFRDVLTFTIDPHDAK 274
Query: 527 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 586
D DDALS+ +L +G +GVHIADV+++V PG+ L+ EA R+TSVY++ R +PMLP L
Sbjct: 275 DFDDALSLRKLENGNWEIGVHIADVTHYVTPGSELEEEAVKRATSVYLVDRVVPMLPEKL 334
Query: 587 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 646
S +V SL P ++L FS ++++ +V++ W GRTVI S + +Y AQ++I+
Sbjct: 335 SNKVCSLRPHEEKLTFSAVFEMDENANVLNEWFGRTVIYSDHRFAYADAQEVIE-----T 389
Query: 647 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYG 706
TL E + G ++KIL+ +R GAL + + F DE
Sbjct: 390 GKGTLAEEILIMNG----------------LAKILRQQRMKSGALAFDKVEVKFELDEEN 433
Query: 707 TPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARA-----FPDSALLRRHPAPNMRKLRE 761
P +D N L EEFMLLANK+ A I + + + R H P +L +
Sbjct: 434 NPTGVYFKESKDANHLIEEFMLLANKSVARFIGKGKNGKPSDKTFVYRIHDEPKPDRLMD 493
Query: 762 FEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDF 821
F + G Q+DT + +SL + +K +++ R M A Y
Sbjct: 494 LSNFVKQFGYQVDTKNRNGISRSLNKMLSDVKGKGEA-NMIETLTIRSMAKAVYSTQ--- 549
Query: 822 KDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEA 862
+ GHY LAF YTHFTSP+RRYPD++VHR L L+
Sbjct: 550 ----NIGHYGLAFDYYTHFTSPIRRYPDMMVHRLLQHYLDG 586
>gi|58267012|ref|XP_570662.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134111352|ref|XP_775592.1| hypothetical protein CNBD5470 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258254|gb|EAL20945.1| hypothetical protein CNBD5470 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226895|gb|AAW43355.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1002
Score = 246 bits (628), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 183/538 (34%), Positives = 258/538 (47%), Gaps = 79/538 (14%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQL----- 403
PTGRVV I++R+ W Y +RSSLS D + L
Sbjct: 382 PTGRVVGIVKRN--------------WRAYV------CHLDRSSLS--DSAFTSLAQQTV 419
Query: 404 --TPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHV 461
TP P++ + + P + ++ + ID W+ S +P H +
Sbjct: 420 FATPLSRALPRIRLRTRQAPQLVDQK------------ILVTIDNWSPTSRYPDGHFVRA 467
Query: 462 FGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVP--WEVPQEEL-----LSRKDLRN 514
G+ E + ++L E + F L+CLP W VP++++ R+DLR+
Sbjct: 468 LGKVASKEAEQESLLLEYEVPYRPFGKAILNCLPAEGDNWVVPKKDMECLEWRDREDLRD 527
Query: 515 FCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYM 574
I +IDP D+DDAL RL +G GVHIADVS+FV P +D EA R T+VY+
Sbjct: 528 LDICSIDPPGCQDIDDALHARRLPNGNIEAGVHIADVSHFVHPDNPMDSEAASRGTTVYL 587
Query: 575 LQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEH 634
+ ++I MLP LL + SL P V+RLAFS+ W+LN +VVD ++VI S +YE
Sbjct: 588 VDKRIDMLPSLLGTNLCSLRPFVERLAFSVIWELNQDAEVVDVRFVKSVISSKEAFTYEA 647
Query: 635 AQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLE 694
AQ D K S N + SI+ L ++ LKD R GAL L
Sbjct: 648 AQLRKDDK----SMN---------------DPLTNSIRLLNHLAIKLKDARMRAGALSLS 688
Query: 695 NS--KPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH- 751
+ K E P + + N L EEFMLLAN A+ I FP +A+LRRH
Sbjct: 689 SPELKIHLASSESAEPINVEQKKLLETNSLVEEFMLLANIWVAKKIQEVFPATAVLRRHS 748
Query: 752 --PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATR 808
P N L++ + G+ LD S+S SL+ + + F+ L+ ATR
Sbjct: 749 PPPKTNFEVLQDI--LMKRKGITLDVSTSKALADSLDACVIAGEPE---FNTLVRIMATR 803
Query: 809 PMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
M A YFCSG ++ +GHY LA P+YTHFTSP+RRY D++ HR L AA+ L+
Sbjct: 804 CMLSAEYFCSGSVSKES-YGHYGLASPIYTHFTSPIRRYADVLAHRQLAAAINYTPLH 860
>gi|372209869|ref|ZP_09497671.1| ribonuclease R [Flavobacteriaceae bacterium S85]
Length = 737
Score = 246 bits (627), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 154/435 (35%), Positives = 231/435 (53%), Gaps = 26/435 (5%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 499
V A I +W +S P + V G+ GE +I+AIL E + F + +
Sbjct: 194 VVAEITDWPSDSKNPFGIITRVLGKSGEHNTEIHAILAEYDLPYE-FPSQVEEAAKALEI 252
Query: 500 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 559
E+ ++E+ R+DLR+ FTIDP A D DDALS + L +G ++G+HIADVS++V G+
Sbjct: 253 EITEDEIAKRRDLRDVLTFTIDPKDAKDFDDALSFQVLENGNYQIGIHIADVSHYVQEGS 312
Query: 560 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 619
LD EA R+TSVY++ R +PMLP +LS V SL P ++L FS +++N +++ +W
Sbjct: 313 VLDNEAFERATSVYLVDRVVPMLPEMLSNGVCSLRPNEEKLTFSAIFEMNEKAELLHQWF 372
Query: 620 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQ-FEW-SDVVRSIKSLYEV 677
GRTV S + +YE AQ II+ + E++ L G+ +E +++ ++I +L +
Sbjct: 373 GRTVTYSDKRFAYEEAQVIIE---NPEANPPTIPSEISLTGESYEVDTNIAKAILTLDSL 429
Query: 678 SKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEV 737
+K ++ KR GAL + + F +E P +D N L EEFMLLANK AE
Sbjct: 430 AKKMRAKRLKSGALAFDKIETKFNLNEKSEPVGVFFKESKDANKLIEEFMLLANKKVAEF 489
Query: 738 IAR---AFPDSALLRR-HPAPNMRKLREFEAFCSKHGLQLDT----SSSGQFHQSLEQAR 789
I R P + R H PN+ KL SK G ++T S+S ++ L+ A
Sbjct: 490 IGRTKSGQPKKTFIYRVHDEPNVDKLEALGNLVSKFGYAINTKSRISTSSSLNKLLKDAH 549
Query: 790 EKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPD 849
K + +++ R M A Y + GHY LAF Y+HFTSP+RRYPD
Sbjct: 550 GKAES-----NMIETLTIRSMSKAEYTTE-------NIGHYGLAFDYYSHFTSPIRRYPD 597
Query: 850 LVVHRTLNAALEAEK 864
++ HR L L+ K
Sbjct: 598 VMAHRLLQHYLDRGK 612
>gi|332878670|ref|ZP_08446387.1| ribonuclease R [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332683307|gb|EGJ56187.1| ribonuclease R [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 692
Score = 246 bits (627), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 169/522 (32%), Positives = 255/522 (48%), Gaps = 68/522 (13%)
Query: 351 GRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKY 410
G V IIER +R VG + +++ F + + PT P+
Sbjct: 99 GEVTKIIERKKQR--FVGTVQLHKNFAF------------------------VVPTDPRM 132
Query: 411 PKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEP 470
+ KD ++GD I RID+W + P V V G G
Sbjct: 133 YTDFFVKKDKLGGA----QDGDRVI------VRIDDWKDHHDSPIGVVEQVLGIPGHQTT 182
Query: 471 QINAILYENAICCSGFSPESLSCLP-CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLD 529
++++IL E + + PE + + + +EE+ R+D+R+ FTIDP A D D
Sbjct: 183 EMHSILAEYGLPYT--YPEEVEAFAKSLDLSIKEEEISHRRDMRDTLTFTIDPRDAKDFD 240
Query: 530 DALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEE 589
DALS + L +G +GVHIADVS++V GT LD EA R+TSVY++ R +PMLP +L
Sbjct: 241 DALSFKMLDNGNYEIGVHIADVSHYVKEGTILDEEAYNRATSVYLVDRVVPMLPEVLCNF 300
Query: 590 VGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSN 649
SL P D+ FS +++N +V++ W+GRT S + +YE AQ +I+
Sbjct: 301 ACSLRPDEDKYTFSAVFEMNQRAEVLNVWLGRTATHSSFRFAYEEAQSVIE-------EA 353
Query: 650 TLGEGWPQLYGQFEWSD--------VVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFL 701
+GEG+ + +D VV +I +L +++ L+ KR GA+ + + F
Sbjct: 354 KVGEGYT-IPADISITDTERSIPANVVEAILTLNTLAQRLRSKRIRLGAITFDKVEVKFD 412
Query: 702 FDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLRE 761
D+ G P ++ N L EEFMLLAN+ AE +A+ + + R H P+ KL++
Sbjct: 413 LDDNGNPTGVYFKESKEANKLIEEFMLLANRKVAEYVAK-MKKTFVYRIHDEPDADKLQQ 471
Query: 762 FEAFCSKHGLQLDTSSSGQFHQSLEQAREKL--KDDYVLFDILINYATRPMQLASYFCSG 819
F ++ G L+ ++ SL E++ K + L D L A R M ASY
Sbjct: 472 FNGVIARFGYSLNLNNKKTITDSLNNLLEEVKGKKEQNLVDTL---AIRSMAKASYSTR- 527
Query: 820 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 861
+ GHY LAF YTHFTSP+RRYPD++VHR L L+
Sbjct: 528 ------NIGHYGLAFDYYTHFTSPIRRYPDVMVHRLLQLYLD 563
>gi|89889727|ref|ZP_01201238.1| ribonuclease R [Flavobacteria bacterium BBFL7]
gi|89518000|gb|EAS20656.1| ribonuclease R [Flavobacteria bacterium BBFL7]
Length = 732
Score = 246 bits (627), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 154/440 (35%), Positives = 232/440 (52%), Gaps = 29/440 (6%)
Query: 438 ELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV 497
++V EWN++ P V + G GE +I+AIL + + F +
Sbjct: 187 QVVLVEFVEWNDKQDSPNGKVKSILGEPGEHNTEIHAILAQYGLPYE-FPTAVEEYANQL 245
Query: 498 PWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLP 557
+ +E+ R+D+R +TIDP+ A D DDALS E+L +G +G+HIADVS++V
Sbjct: 246 DKSITDQEISKRRDMRESLTYTIDPADAKDFDDALSFEKLENGHYEIGIHIADVSHYVKE 305
Query: 558 GTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR 617
GT LD EA R+TSVY++ R +PMLP +LS V SLNP D+L FS ++++ +G V +
Sbjct: 306 GTPLDDEAYERATSVYLVDRVVPMLPEVLSNGVCSLNPHEDKLCFSSVFEMDDSGKVYKQ 365
Query: 618 WIGRTVIRSCCKLSYEHAQDIID-GKFDVESSNTLGEGWPQLYGQFEWSD--VVRSIKSL 674
W GRT+I S + +YE AQ II+ GK ++ + +L + + +D +V + +L
Sbjct: 366 WFGRTIIHSDQRFAYEEAQHIIETGKGEIPAEISLTQ-------KDTTADPAIVEATLTL 418
Query: 675 YEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTA 734
++K ++++R GAL + ++ F +E P +D N L EEFMLLAN+
Sbjct: 419 DSIAKKMRNERMVQGALSFDKTEVKFNLNENSEPVGVYFKTSKDANKLIEEFMLLANRKV 478
Query: 735 AEVIARAFPDSALLRR-HPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLK 793
A I + P + R H PN KL ++ G +LD QSL + +K
Sbjct: 479 AAFIGKRDPKHTFVYRIHDEPNDEKLGALAKIVTRFGHKLDLRDRKHVTQSLNKLLIDVK 538
Query: 794 --DDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 851
+ + D L A R M A Y + GHY LAF Y+HFTSP+RRYPD++
Sbjct: 539 GNKEQNMVDTL---AIRTMSKAEYSTQ-------NIGHYGLAFDYYSHFTSPIRRYPDVM 588
Query: 852 VHRTLNAALE-----AEKLY 866
VHR L L+ +E+LY
Sbjct: 589 VHRLLQHYLDKGKSVSEELY 608
>gi|423300891|ref|ZP_17278915.1| ribonuclease R [Bacteroides finegoldii CL09T03C10]
gi|408472226|gb|EKJ90754.1| ribonuclease R [Bacteroides finegoldii CL09T03C10]
Length = 718
Score = 246 bits (627), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 150/431 (34%), Positives = 223/431 (51%), Gaps = 45/431 (10%)
Query: 442 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWE 500
+I EW +++ P V+ + G+ G+ +++AIL E + P+++ + +P E
Sbjct: 196 VKITEWPDKAKNPIGQVIDILGKAGDNTTEMHAILAEFGLPY--VYPKAVETAADKIPAE 253
Query: 501 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 560
+ EE+ R+D R FTIDP A D DDALSI + +G+ VGVHIADV+++V G
Sbjct: 254 ITPEEIAKREDFRKVTTFTIDPKDAKDFDDALSIRSIKNGLWEVGVHIADVTHYVKEGGI 313
Query: 561 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIG 620
+D EA+ R+TSVY++ R IPMLP L + SL P ++LAFS+ +D+ G++ D I
Sbjct: 314 IDKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPNEEKLAFSVIFDITEKGEIKDSRIA 373
Query: 621 RTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKI 680
TVI S + +YE AQ II+ K EG D + L ++K
Sbjct: 374 HTVINSDRRFTYEEAQQIIETK----------EG-----------DYKEEVLMLDTIAKA 412
Query: 681 LKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR 740
L++KRF GA+ + + F DE G P +D N L EEFMLLANKT AE I R
Sbjct: 413 LREKRFAAGAINFDRYEVKFEIDEKGKPISVYFKESKDANKLVEEFMLLANKTVAEKIGR 472
Query: 741 A----FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREK 791
P R H P+ KL F ++ G ++ T+ S + L+ K
Sbjct: 473 VPKNKKPKVLPYRIHDLPDPEKLENLSQFIARFGYKVRTNGTKTDISKSINHLLDDIHGK 532
Query: 792 LKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 851
++ +++ + R MQ A Y + GHY LAF YTHFTSP+RR+PD++
Sbjct: 533 KEE-----NLIETVSIRAMQKARYSTH-------NIGHYGLAFDYYTHFTSPIRRFPDMM 580
Query: 852 VHRTLNAALEA 862
VHR + ++
Sbjct: 581 VHRLVTKYMDG 591
>gi|190346539|gb|EDK38643.2| hypothetical protein PGUG_02741 [Meyerozyma guilliermondii ATCC
6260]
Length = 978
Score = 246 bits (627), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 224/745 (30%), Positives = 335/745 (44%), Gaps = 128/745 (17%)
Query: 160 FAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEGD 219
F ++S + ++ G ++ + ++ +N L+ + + +LI G NRA D
Sbjct: 237 FPEYYSNSRIMGGIKNGTLYQGIINISPYNILQGSVSVPAFKKPLLIIGSKNLNRAFHSD 296
Query: 220 FVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCTLL 279
V+++ L K K +S+IVE+S + N D G
Sbjct: 297 SVIVE-----LLPKDKWREPSSTIVEESAVAQNDNPDEDDDINGSEP------------- 338
Query: 280 SEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSA 339
KG+ D++ + ++ +E + TS+S ++ S Q
Sbjct: 339 --KGVISDNE-------RRLLAQEALHV-------TSESKKQQSRLQ------------- 369
Query: 340 MISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDRE 399
PT +VV I RS W Y G D
Sbjct: 370 ---------PTAKVVGISRRS--------------WRYYVGQV--------------DPS 392
Query: 400 YIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVL 459
+ + K +V++ K LP I+ R + + +V +D W S PQ H +
Sbjct: 393 SVSESGNASKTCFVVLMDKVLP-KIRIRTRKATDLLGKRIVVV-VDSWPSTSKHPQGHFV 450
Query: 460 HVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP--CVPWEVPQE------ELLSRKD 511
G E + A+L E+ + FS L CLP W+VP+ +L RKD
Sbjct: 451 RSLGDVESAEAETEALLLEHDVEYRPFSKNVLDCLPKEGANWKVPETLNMADGQLAQRKD 510
Query: 512 LRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTS 571
LR+ + +IDP D+DDAL +L +G VGVHIADV++FV P TALD E R TS
Sbjct: 511 LRDKLVCSIDPPGCVDIDDALHARKLPNGNYEVGVHIADVTHFVKPNTALDQEGASRGTS 570
Query: 572 VYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLS 631
VY++ ++I MLP+LL + SL P VDR AFS+ W+L+ ++V+ +++I+S S
Sbjct: 571 VYLVDKRIDMLPMLLGTNLCSLKPYVDRFAFSVIWELDQNAEIVNVDYMKSIIKSREAFS 630
Query: 632 YEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGAL 691
YE AQ ID K S N ++ +S++ L ++SK LK KR GAL
Sbjct: 631 YEQAQLRIDDK----SQN---------------DELTQSMRILLKLSKKLKQKRLDAGAL 671
Query: 692 RLENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRR 750
L + + V + E P + + + N L EEFML AN + A I A+P +A+LRR
Sbjct: 672 NLASPEVKVHMDSETSDPGEVEIKKLLETNSLVEEFMLFANISVARKIYDAYPQTAMLRR 731
Query: 751 H---PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YA 806
H PA N L E K G+ + SS SL++ E D Y F+ L+ +
Sbjct: 732 HAPPPATNFEALNEM-LRVRKKGMSISLESSKALADSLDRC-EDPNDPY--FNTLLRIMS 787
Query: 807 TRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
TR M A YF SG + ++ HY LA +YTHFTSP+RRY D+V HR L A+ E L
Sbjct: 788 TRCMMAAEYFPSGSY-GYPEFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYENLD 846
Query: 867 WKHR-----RMLPKNNHREGVRGRF 886
HR ++ KN +R +F
Sbjct: 847 LSHRDKTKMELIVKNINRRHRNAQF 871
>gi|110596746|ref|ZP_01385036.1| VacB and RNase II family 3'-5' exoribonucleases:Ribonuclease R
[Chlorobium ferrooxidans DSM 13031]
gi|110341433|gb|EAT59893.1| VacB and RNase II family 3'-5' exoribonucleases:Ribonuclease R
[Chlorobium ferrooxidans DSM 13031]
Length = 807
Score = 246 bits (627), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 155/428 (36%), Positives = 229/428 (53%), Gaps = 43/428 (10%)
Query: 455 QAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRN 514
QA VL V G G+ +++AI I + F + + + + +++L R D+R+
Sbjct: 270 QAKVLEVLGEAGDSSVEVSAIARSKGIDET-FDKQIVDFASSIREGITEKDLEGRLDIRD 328
Query: 515 FCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYM 574
+FTIDP A D DDALS+E L DG+ R+GVHIADVS++V + LD EA R+TSVY+
Sbjct: 329 KVVFTIDPVDAKDFDDALSVETLEDGLYRIGVHIADVSHYVPENSPLDREALKRATSVYL 388
Query: 575 LQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEH 634
+ R IPMLP LSEE+ SLNPGVDR+AFS+F+ + + G+V +TVI S + +YE
Sbjct: 389 VDRVIPMLPSRLSEEICSLNPGVDRMAFSVFFTMTAEGEVRKHEFQKTVIHSKRRYAYED 448
Query: 635 AQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLE 694
++I+ G+ ++ D ++ L +S +L++KRF G L E
Sbjct: 449 VEEILKK------------------GKGDYCD---ELQLLDRISVLLREKRFKHGGLDFE 487
Query: 695 NSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDS------ALL 748
+ F G P + + R + L EEFMLLAN+ AE + R F ++ +
Sbjct: 488 TEEVRFKLGSKGEPLEVMRKERLGSHRLIEEFMLLANRKVAEYLTRTFKENKKEAQPVIY 547
Query: 749 RRHPAPNMRKLREFEAFCSKHG--LQLDTSSSGQF--HQSLEQAREKLKDDYVLFDILIN 804
R H +P K+ F + G L+L+ G ++L Q +++K V F ++
Sbjct: 548 RVHGSPQQEKVIILSNFVKRFGFDLKLNRGKEGPIVTAKALRQLLQQVKGTNVEF-LVSE 606
Query: 805 YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
R M A Y +GD + GH+ L F YTHFTSP+RRYPDL+VHR L E E
Sbjct: 607 LVLRSMSKAVY--TGD-----NLGHFGLGFEHYTHFTSPIRRYPDLIVHRLL---FEYEG 656
Query: 865 LYWKHRRM 872
L K R++
Sbjct: 657 LRKKRRKI 664
>gi|126662735|ref|ZP_01733734.1| ribonuclease R [Flavobacteria bacterium BAL38]
gi|126626114|gb|EAZ96803.1| ribonuclease R [Flavobacteria bacterium BAL38]
Length = 725
Score = 246 bits (627), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 171/526 (32%), Positives = 262/526 (49%), Gaps = 64/526 (12%)
Query: 346 TKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTP 405
+++P V+ ++ER ++ VG +++ + F + +T
Sbjct: 130 SRKPEAEVLEVLER--KKSEFVGVIDIQKNFAF------------------------VTT 163
Query: 406 THPK-YPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGR 464
T+ K Y + + + D+ E GD +V +++W +++ P V+ V G+
Sbjct: 164 TNAKMYTDIFIPKNKINDA-----EHGD------VVLVTLEDWPKKADSPFGSVIKVLGK 212
Query: 465 GGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPST 524
GE +I+AIL E + F E + + + +EE+ R+D+R+ FTIDP
Sbjct: 213 PGEHNTEIHAILAEYGLPYD-FPIEVEAYANKIDTSITEEEIKKRRDMRDVLTFTIDPKD 271
Query: 525 ATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPV 584
A D DDALS + L +G +GVHIADVS+++ GT LD EA R+TSVY++ R +PMLP
Sbjct: 272 AKDFDDALSFQILENGNYEIGVHIADVSHYLQEGTILDEEAYNRATSVYLVDRVVPMLPE 331
Query: 585 LLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFD 644
+LS SL P ++ FS + LN+ +V+D W GRTV S + +YE AQ+II+ K D
Sbjct: 332 VLSNFACSLRPHEEKYTFSAVFQLNNKAEVLDAWFGRTVTYSDQRFAYEEAQNIIETKSD 391
Query: 645 V---ESSNTLGEGW-PQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVF 700
V E S T E P+ +V + + E++KIL+ KR GA+ + + F
Sbjct: 392 VIPAEISLTRKEYIVPK--------PIVDATLKMDELAKILRRKRMAAGAISFDKVEVKF 443
Query: 701 LFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLR 760
+E P +D N L EEFMLLAN+ AE I + + + R H PN KL
Sbjct: 444 NLNEEAEPIGVYFKQSKDANHLIEEFMLLANRKVAEFIGKQ-KKTFIYRIHDEPNEDKLI 502
Query: 761 EFEAFCSKHGLQLDTSSSGQFHQSLEQAREKL--KDDYVLFDILINYATRPMQLASYFCS 818
+ +K G ++ S SL E++ K + L D L R M A+Y
Sbjct: 503 NLQTVIAKFGYSINFRSKIDISSSLNNLLEEVQGKKEQNLVDTL---TIRSMSKAAYSTE 559
Query: 819 GDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
+ GHY LAF Y+HFTSP+RRYPD++ HR L ++ K
Sbjct: 560 -------NIGHYGLAFDYYSHFTSPIRRYPDVMAHRLLQFYIDGGK 598
>gi|322708538|gb|EFZ00115.1| mitotic control protein dis3 [Metarhizium anisopliae ARSEF 23]
Length = 928
Score = 246 bits (627), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 194/570 (34%), Positives = 271/570 (47%), Gaps = 59/570 (10%)
Query: 306 NYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDG 365
N + T D + VS ++ +R + SS +PT +VV +I+R+
Sbjct: 277 NITKNENADTEDRNDFVSDKERKALQEEAKR-THKSSSESQLQPTAKVVGVIKRN----- 330
Query: 366 IVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIK 425
W Y G + +S ++ + L P K PK+ + + + + +
Sbjct: 331 ---------WRQYVGHIDPSSASKSASSQGRKQDSVFLIPMDKKIPKIRLRTRQVSELLG 381
Query: 426 KRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSG 485
KRL LV ID W +S P H + G + A+L E +
Sbjct: 382 KRL----------LVT--IDAWERDSRHPVGHFVRSLGELETKAAETEALLLEWDVQYRP 429
Query: 486 FSPESLSCLPC------VPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSD 539
F L CLP VP V R+DLR I +IDP D+DDAL +L +
Sbjct: 430 FPKTVLDCLPKEGHDWRVPASVEDPGWRDREDLRGLLICSIDPVGCQDIDDALHARKLPN 489
Query: 540 GISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDR 599
G VGVHIADVS+FV P A+D EA +R T+VY++ ++I MLP LL ++ SL P V+R
Sbjct: 490 GNVEVGVHIADVSHFVKPANAMDTEASIRGTTVYLVDKRIDMLPPLLGTDLCSLKPYVER 549
Query: 600 LAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLY 659
AFS+ W+LN D+V ++VI+S SYE AQ ID D + L G
Sbjct: 550 YAFSVLWELNDNADIVSVRFTKSVIKSREAFSYEQAQLRID---DTSQQDDLTNG----- 601
Query: 660 GQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFLFDEYGTPYDSVLSGRED 718
++ L ++SK LK KR GAL L + + V + E P D D
Sbjct: 602 -----------MRMLLKLSKKLKKKRMDAGALSLSSPEVKVQMESETSDPIDVKTKELLD 650
Query: 719 LNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF-EAFCSKHGLQLDTSS 777
N L EEFML AN + A I AFP +A+LRRH AP E + K G +L T +
Sbjct: 651 TNSLVEEFMLFANISVAAKIYDAFPQTAILRRHAAPPKTNFDELADQLRVKRGFELRTDT 710
Query: 778 SGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPV 836
S SL+ +K D + F+ L+ ATR M A YFCSG + ++ HY LA +
Sbjct: 711 SKALADSLDACVDK-SDPF--FNTLVRIMATRCMMSAEYFCSGT-QAYPEFRHYGLASEI 766
Query: 837 YTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
YTHFTSP+RRY DL+ HR L AA+ E ++
Sbjct: 767 YTHFTSPIRRYADLLAHRQLAAAIGYEAVH 796
Score = 41.2 bits (95), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
++ ++S+ + ++ G + ++ V+ +N LE K+ +LI G + NRAV+G
Sbjct: 193 LYPEYYSLSRMMTGVKAGLMHQGIFNVSPYNYLEGSIKVPAFSKPLLILGRESINRAVDG 252
Query: 219 DFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSD 259
D V++++ W + ++ I+E+ N+ N D
Sbjct: 253 DVVVVEMLPQDKWKE-----PSTKIIEEDNITKNENADTED 288
>gi|372223167|ref|ZP_09501588.1| ribonuclease R [Mesoflavibacter zeaxanthinifaciens S86]
Length = 730
Score = 245 bits (626), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 173/545 (31%), Positives = 261/545 (47%), Gaps = 58/545 (10%)
Query: 322 VSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG 381
+ +S+ N + E + ++ S KRP G +V ++ R + VG L N+ F +
Sbjct: 108 IPNSKLNGAFHQDEVMVSLRPSRKGKRPEGEIVKVLNRF--KTEYVGVLERNRNFAF--- 162
Query: 382 SRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVA 441
R + + + VP ++K +E D + V
Sbjct: 163 VRPMDNRMYTDIFVP---------------------------LEKTMEAEDGS----KVL 191
Query: 442 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEV 501
+ +W +E+ P V+ V G GE +I++IL E + F E + +
Sbjct: 192 VALGDWPKEADSPYGKVVKVLGMPGEHNTEIHSILAEYGLPYE-FPYEVEQFANKLDTSI 250
Query: 502 PQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTAL 561
EE+ R+D+R FTIDP A D DDALS +L +G +G+HIADVS++V P + L
Sbjct: 251 KAEEIAKRRDMRQDLTFTIDPKDAKDFDDALSFTKLENGNFEIGIHIADVSHYVTPDSIL 310
Query: 562 DIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGR 621
D EA R+TSVY++ R +PMLP +LS SL P ++ FS ++L+ ++++W GR
Sbjct: 311 DEEAYNRATSVYLVDRVVPMLPEILSNNACSLRPREEKYTFSAIFELDKEAKLINQWFGR 370
Query: 622 TVIRSCCKLSYEHAQDIIDGKFDV--ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 679
TVI S + +YE AQ II+ K + + + EG+ +V +I +L ++K
Sbjct: 371 TVIDSNERFAYEEAQHIIETKAGIIPKEISIREEGYAV------DETIVEAILTLDGLAK 424
Query: 680 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 739
I++ KR GA+ + + F DE P +D N L EEFMLLAN+ AE I
Sbjct: 425 IMRSKRMDSGAISFDKIEVRFNLDEENNPESVYFKEAKDANKLIEEFMLLANRKVAEYIG 484
Query: 740 RAFPDSALLRR-HPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQARE--KLKDDY 796
+ P + R H P++ KL S+ G + + SL + E K K +
Sbjct: 485 KQKPKKTFVYRVHDQPDLDKLMALNGVISRFGHSIALKDRKTINSSLNKLLEDVKGKKEQ 544
Query: 797 VLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTL 856
L D L A R M A Y + GHY LAF YTHFTSP+RRYPD++VHR L
Sbjct: 545 NLVDTL---AIRSMSKAIYTTE-------NIGHYGLAFDYYTHFTSPIRRYPDVMVHRLL 594
Query: 857 NAALE 861
L+
Sbjct: 595 QHYLD 599
>gi|305665811|ref|YP_003862098.1| putative exoribonuclease [Maribacter sp. HTCC2170]
gi|88710579|gb|EAR02811.1| putative exoribonuclease [Maribacter sp. HTCC2170]
Length = 729
Score = 245 bits (626), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 155/443 (34%), Positives = 226/443 (51%), Gaps = 28/443 (6%)
Query: 427 RLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGF 486
+ E+GD V I EW +++ P + + G+ GE +I++IL E + F
Sbjct: 183 KAEDGDK------VVVEITEWPDKASSPFGTITSILGKPGEHHTEIHSILAEYGLPYE-F 235
Query: 487 SPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGV 546
E + + EE+ R+D+R FTIDP A D DDALS E L +G +G+
Sbjct: 236 PYEVEQYANTLDTSIKAEEIAKRRDMREVLTFTIDPKDAKDFDDALSFEILENGNYEIGI 295
Query: 547 HIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFW 606
HIADVS+++ P T LD EA R+TSVY++ R +PMLP +LS SL P ++ FS +
Sbjct: 296 HIADVSHYLKPDTILDEEAYDRATSVYLVDRVVPMLPEVLSNNACSLRPNEEKYTFSAIF 355
Query: 607 DLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIID-GKFDVESSNTL-GEGWPQLYGQFEW 664
+L+ + ++W GRTVI S + +YE AQ II+ G + + ++ G G+
Sbjct: 356 ELDDKAIIKNQWFGRTVIDSNERFAYEEAQYIIENGNGSIPNEISIRGNGYSV------S 409
Query: 665 SDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFE 724
D+V + +L ++KI++ KR GA+ + + F ++ P +D N L E
Sbjct: 410 EDIVNATLTLDRLAKIMRSKRMQQGAISFDKVEVRFNLNKNNEPESVYFKEAKDANKLIE 469
Query: 725 EFMLLANKTAAEVIARAFPDSALLRR-HPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQ 783
EFMLLAN+ AE I + P + R H PN KL S+ G +L+
Sbjct: 470 EFMLLANRKVAEFIGKQKPKKTFIYRIHDDPNEEKLMALNGIISRFGHKLNFKDKKSISA 529
Query: 784 SLEQAREKLK--DDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFT 841
SL Q E +K + L D L A R M A Y + GHY LAF Y+HFT
Sbjct: 530 SLNQLLEDVKGQKEQNLVDTL---AIRSMSKAIYTTD-------NIGHYGLAFDYYSHFT 579
Query: 842 SPLRRYPDLVVHRTLNAALEAEK 864
SP+RRYPD++VHR L L+ K
Sbjct: 580 SPIRRYPDVMVHRLLQHYLDEGK 602
>gi|121701743|ref|XP_001269136.1| cell wall biogenesis protein phosphatase Ssd1, putative [Aspergillus
clavatus NRRL 1]
gi|119397279|gb|EAW07710.1| cell wall biogenesis protein phosphatase Ssd1, putative [Aspergillus
clavatus NRRL 1]
Length = 1316
Score = 245 bits (626), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 205/733 (27%), Positives = 330/733 (45%), Gaps = 96/733 (13%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R +F P+ + L G + RVN NR +AY + D+ I G +NRA
Sbjct: 364 RKTLFTPYLPQANLPALLSNGQLVAGILRVNKKNRSDAYVTSPDLDADIFICGSKDRNRA 423
Query: 216 VEGDFVLIKV-DRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYS 274
+EGDFV +++ D +W++ + + ++ + +N G K+ S
Sbjct: 424 LEGDFVAVELLDVDEVWSQKREKEEKKKRKDITDARSGSNA-------GTDKLSRS---- 472
Query: 275 NCTLLSEKGIHHDDDSSSEAYNQEM-----IEREGYNYINGHHPSTSDSTEKVSSSQQND 329
DS + QE+ I R G T+K + + +
Sbjct: 473 --------------DSGANGDRQEIGPDGSIRRRGS--------LRQRPTQKKNDDVEVE 510
Query: 330 GMNAIERLSAMISSYPTKRPTGRVVSIIERSPRR--DGIVGFLN-VNQWFNYKGGSRKDA 386
G + + IS G +V++IER + G +G L +Q K + + A
Sbjct: 511 GQSLLLVEEDEISDEQKPLYAGHIVAVIERIAGQMFSGTLGLLRPSSQATKEKQEAERMA 570
Query: 387 KKNRSSLSVPDRE-----YIQLTPTHPKYPKMVVLVKDLP-DSIKKRLEEGDATIEMELV 440
+ DR+ + PT + P + + + P D ++K + + +
Sbjct: 571 RDGGHGRHHQDRQQDKPKIVWFKPTDKRVPLIAIPTEQAPRDFVEKHQDYAN-----RIF 625
Query: 441 AARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWE 500
A I W S P ++ G G+++ + +A+L +N FS + + W
Sbjct: 626 VACIKRWPITSLHPFGTLVEQLGEMGDLKVETDALLRDNNFGADEFSEAVMKSIGWEDWS 685
Query: 501 VPQEE---LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLP 557
V E L SR+D R+ FTI+P+ A DLD+A ++RL DG VG+H+AD+++FV
Sbjct: 686 VSNEAEALLASRRDFRSETTFTIEPNGAKDLDNAYHVKRLPDGKVEVGIHVADIAHFVKA 745
Query: 558 GTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR 617
+ +D EA+ R T+VY++ R + MLP +S E+ +L PG DRL S+ + N VD
Sbjct: 746 NSLVDREAKKRGTAVYLMDRLVNMLPQRVSTELCALLPGQDRLTVSVVFTANPETGAVDE 805
Query: 618 --WIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 675
WIG+ +I+S +LSY+ I G+ +V + + I++L
Sbjct: 806 EVWIGKGIIKSAGRLSYDDVNTAIGGESNVPVAGVTAD----------------MIQTLN 849
Query: 676 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTP-----YDSVLSGREDLNFLFEEFMLLA 730
++ ++ RF + L + ++ D+ P +DS ++ RE L EE A
Sbjct: 850 AIAVKFRETRFGNRVSNLPPLRLLYQLDDENVPVERNIFDSTVA-RE----LVEELRHKA 904
Query: 731 NKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQARE 790
N A + A PD ALLRR +PN R+L+ F + G D SSSG SL
Sbjct: 905 NFFVARKLVSAIPDKALLRRQSSPNARRLQSFMDRMDRLGFDFDPSSSGTLQSSL----C 960
Query: 791 KLKDDYV---LFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRY 847
K++DD + + IL+ + MQ A Y+ +G +D+ HY L PVYTHFT+P RRY
Sbjct: 961 KVQDDDLRKGMETILV----KAMQRAKYYVAGTVQDEQRH-HYTLNLPVYTHFTNPSRRY 1015
Query: 848 PDLVVHRTLNAAL 860
D+VVHR L A L
Sbjct: 1016 ADIVVHRQLEAVL 1028
>gi|225438440|ref|XP_002276909.1| PREDICTED: exosome complex exonuclease RRP44 isoform 1 [Vitis
vinifera]
Length = 899
Score = 245 bits (626), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 170/521 (32%), Positives = 256/521 (49%), Gaps = 94/521 (18%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 407
RP+GRVV II+R+ W +Y GS + + + ++
Sbjct: 338 RPSGRVVGIIKRN--------------WHSY-CGSLEPMPMPAGNGGIAHALFVS---KD 379
Query: 408 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 467
+ PK+ + + L + + KR+ +VA +D W+ S +P H +
Sbjct: 380 RRIPKIRIQTRQLGNLLDKRI----------IVA--VDSWDCLSRYPSGHYV-------- 419
Query: 468 VEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLS--RKDLRNFCIFTIDPSTA 525
+L EN I FS + L+CLP +PW V E+L + R DLR+ C+F++DP
Sbjct: 420 -------VLIENDINSRPFSLQVLACLPPLPWSVSSEDLANPCRLDLRHVCVFSVDPPD- 471
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
IADV+ FV PGT LD EA R TSVY+++R+I MLP
Sbjct: 472 ----------------------IADVTNFVHPGTPLDDEAAQRGTSVYLVERRIDMLPKP 509
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
L+E++ SL V+RLAFS+ W++ +++ +++I+SC LSY AQ +D +
Sbjct: 510 LTEDICSLRSDVERLAFSVIWEMTPQAEIISTKYTKSIIKSCAALSYIEAQARMDDSRLM 569
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 704
+ + ++++ ++K+++ +R GAL L +++ F D E
Sbjct: 570 DP-------------------LTMDLRNMNALAKVMRLRRIERGALTLASAEVKFQIDTE 610
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 764
P D + + N + EEFML AN + AE I + FP +LLRRHP+P L
Sbjct: 611 THDPLDIGMYQIREANQMVEEFMLAANVSVAEKILKHFPLCSLLRRHPSPTREMLEPLLR 670
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 824
+ GL LD SSS SL+ A + DD ++ ATR M A YFCSGD
Sbjct: 671 TAAAVGLNLDVSSSKALADSLDHA---VGDDPYFNKLIRILATRCMTQAVYFCSGDLS-P 726
Query: 825 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 865
++ HY LA P+YTHFTSP+RRY D++VHR L A+L KL
Sbjct: 727 PEFHHYGLAAPLYTHFTSPIRRYADVIVHRLLAASLGLYKL 767
Score = 48.1 bits (113), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 40/83 (48%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R I++ H M + L +G + RVN +N EAY E + +++I G NRA
Sbjct: 214 RKVIYSEHKPMSEITSGLHRGIYHQGKLRVNRYNPFEAYVGSESIGDEIIIYGRGNMNRA 273
Query: 216 VEGDFVLIKVDRLSLWAKMKGFS 238
+GD V +++ W + K S
Sbjct: 274 FDGDVVAVELLPQDQWQEEKSLS 296
>gi|296005540|ref|XP_001350300.2| mitotic control protein dis3 homologue, putative [Plasmodium
falciparum 3D7]
gi|225632034|emb|CAD52709.2| mitotic control protein dis3 homologue, putative [Plasmodium
falciparum 3D7]
Length = 1073
Score = 245 bits (626), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 156/449 (34%), Positives = 228/449 (50%), Gaps = 38/449 (8%)
Query: 433 ATIEMEL----VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSP 488
A +E EL V ID W+ S P + V G ++E + I E I FS
Sbjct: 515 AQLEDELRNKRVIVTIDNWDIYSRNPLGRCISVLGNCDDIETETKLIYNEYNISTREFSE 574
Query: 489 ESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLS-DG------I 541
CLP W +P EE R D RN F+IDP D+DDALS+E L DG I
Sbjct: 575 NVYKCLPPNNWVIPDEEYEKRNDFRNVLTFSIDPPGCQDIDDALSVEFLQQDGNIEKNYI 634
Query: 542 SRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLA 601
R+GVHIADVSYFV + +D+EA R T+VY++ +++ MLP LL+ + SL G +RL
Sbjct: 635 YRIGVHIADVSYFVKQNSPIDLEASKRCTTVYLINQRVDMLPKLLTTNLCSLVEGEERLT 694
Query: 602 FSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQ 661
+S + N D++D + + +I+S SYE AQ++ID K D
Sbjct: 695 YSCIFCFNKDFDIIDISVKKCIIKSNKSFSYEQAQNVIDDKND----------------- 737
Query: 662 FEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGR----E 717
SD +S++ L +++K LK K DGAL L + V LF+ + + +
Sbjct: 738 --QSDTAKSLRLLNKIAKHLKQKWSNDGALELRGNTEV-LFEFEANDFSKAKNLKPYVCY 794
Query: 718 DLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFC-SKHGLQLDTS 776
+ N L E FMLLAN++ A +I + F +++LRRHP P L+E + + +
Sbjct: 795 ETNKLIEAFMLLANRSVARIIFQNFKAASVLRRHPPPKHEYLKELNDYLKTIQVFDFKYN 854
Query: 777 SSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPV 836
+S S+ LK+D +L +IL T+ M A + + ++ HY LA +
Sbjct: 855 TSKDLSHSINNIN--LKNDNILSNILKVMVTKCMNEAVFISGYNVHNNDMLRHYGLAADI 912
Query: 837 YTHFTSPLRRYPDLVVHRTLNAALEAEKL 865
YT FTSP+RRY D++VHR LN + E+L
Sbjct: 913 YTFFTSPIRRYADIMVHRILNHIYQIEEL 941
>gi|149369339|ref|ZP_01889191.1| exoribonuclease II [unidentified eubacterium SCB49]
gi|149356766|gb|EDM45321.1| exoribonuclease II [unidentified eubacterium SCB49]
Length = 741
Score = 245 bits (625), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 149/436 (34%), Positives = 221/436 (50%), Gaps = 24/436 (5%)
Query: 438 ELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV 497
E V I +W E++ P +V+ G GE +I++IL + + F E +
Sbjct: 190 ERVLVEIIDWPEKADSPNGNVIKSLGMPGEHNTEIHSILAQYGLPYE-FPAEVEDYANKI 248
Query: 498 PWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLP 557
+ E+ R+D+R FTIDP A D DDALS L +G +G+HIADVS+++ P
Sbjct: 249 DTSIHASEIAKRRDMRKDLTFTIDPKDAKDFDDALSFTELENGNYEIGIHIADVSHYLKP 308
Query: 558 GTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR 617
GT LD EA R+TSVY++ R +PMLP +LS SL P ++ FS +++N +VV+
Sbjct: 309 GTVLDDEAFERATSVYLVDRVVPMLPEILSNGACSLRPHEEKYTFSAVFEMNKKAEVVNE 368
Query: 618 WIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSD--------VVR 669
W GRTV S + +YE AQ II+ E G+ + + +D + +
Sbjct: 369 WFGRTVTYSDARFAYEEAQLIIENNSHPEPVE--GQLNTTITSEISITDKEYEVEQPIAK 426
Query: 670 SIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLL 729
+I + ++KIL+ R +GA+ + + F+ D+ P +D N L EEFMLL
Sbjct: 427 AILEMDRLAKILRKARMNNGAISFDKVEVKFILDKEANPEGVYFKESKDANKLIEEFMLL 486
Query: 730 ANKTAAEVIARAFPDSALLRR-HPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQA 788
AN++ A I + P + R H P+ K+ E + G ++DT QSL Q
Sbjct: 487 ANRSVAAFIGKQNPKKTFVYRVHDEPDDEKIAALENLIKQFGYKMDTRDKKSTSQSLNQL 546
Query: 789 REKL--KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRR 846
+ K + L D L A R M A Y + + GHY LAF Y+HFTSP+RR
Sbjct: 547 LSDVVGKKEQNLIDTL---AIRSMSKAVYTTN-------NIGHYGLAFDYYSHFTSPIRR 596
Query: 847 YPDLVVHRTLNAALEA 862
YPD++VHR L L+
Sbjct: 597 YPDVMVHRLLQHYLDG 612
>gi|298372925|ref|ZP_06982915.1| ribonuclease R [Bacteroidetes oral taxon 274 str. F0058]
gi|298275829|gb|EFI17380.1| ribonuclease R [Bacteroidetes oral taxon 274 str. F0058]
Length = 713
Score = 245 bits (625), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 182/577 (31%), Positives = 271/577 (46%), Gaps = 85/577 (14%)
Query: 292 SEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPT- 350
+ AY I+R+ + P + ++ N +N +++ M+ YP +R
Sbjct: 74 TAAYITGTIDRQSVAHKTYLVPDDGSESVFIAERSMNRALNG-DKVKVML--YPLRRKKE 130
Query: 351 --GRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 408
G VV IIER R+ VG + D+K + L +++
Sbjct: 131 LEGEVVEIIERV--RERFVGII--------------DSKHGVTILKANNKQL-------- 166
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
P +++ P K + G I A I W ++ P ++ + G G
Sbjct: 167 --PMNIII----PPDKTKGAKNGQKCI------AAITYWGDKYENPIGEIVDILGDTGNN 214
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDL 528
+++AIL E + S + E +P + ++E+ R D R FTIDP A D
Sbjct: 215 NTEMHAILAEYGLPYS-YPQEIEKEANKIPETITEDEIKRRIDFRTTTTFTIDPRDAKDF 273
Query: 529 DDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSE 588
DDALSI+ L DG+ VGVHIADV++FV G +D EA R+TSVY++ R +PMLP LS
Sbjct: 274 DDALSIKDLGDGLWEVGVHIADVTHFVPEGGIIDQEAVKRATSVYLVDRTVPMLPEHLSN 333
Query: 589 EVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESS 648
+ SL P ++L +S + +N +V+D I RTVI+S + +YE AQ+II+
Sbjct: 334 FICSLRPDEEKLTYSCIFTINDLAEVIDYKIARTVIKSDRRFTYEEAQEIIE-------- 385
Query: 649 NTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTP 708
G+G D + L +++K L++KRF GA+ E S+ F D+ G P
Sbjct: 386 --TGKG-----------DFATEVLRLNDLAKKLREKRFASGAIAFERSEVRFEIDDTGKP 432
Query: 709 YDSVLSGREDLNFLFEEFMLLANKTAAEVIA----RAFPDSALLRRHPAPNMRKLREFEA 764
+D N L EEFMLLANK A+ I R P + + R H PN KL F
Sbjct: 433 VSVFFKESKDSNKLIEEFMLLANKYVAQHIGMPRNREKPKTFVYRIHDVPNPEKLSNFAT 492
Query: 765 FCSKHGLQL-----DTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSG 819
F K G ++ T+ S + L+Q K + +++ A R M A+Y
Sbjct: 493 FIKKFGYKIKTDGKKTAVSSSINHLLDQIEGKKEQ-----NMIETLAIRSMAKAAYSTK- 546
Query: 820 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTL 856
+ GHY LA YTHFTSP+RRYPD++VHR L
Sbjct: 547 ------NIGHYGLAMKYYTHFTSPIRRYPDMMVHRLL 577
>gi|302804083|ref|XP_002983794.1| hypothetical protein SELMODRAFT_445658 [Selaginella moellendorffii]
gi|300148631|gb|EFJ15290.1| hypothetical protein SELMODRAFT_445658 [Selaginella moellendorffii]
Length = 1047
Score = 245 bits (625), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 175/523 (33%), Positives = 254/523 (48%), Gaps = 90/523 (17%)
Query: 443 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSP--ESLSCLP----C 496
RID W +S FP+ HV+ G G++ ++NAIL EN I + FS SL LP
Sbjct: 317 RIDNWELDSRFPRGHVVRSLGPIGDLNAELNAILVENGISVAPFSNFIRSLQELPEDSLD 376
Query: 497 VPWEVPQEELLSRKDLR---NFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSY 553
PW +P+EE R+D+R C +IDP + D+DD LS+ L +G+ +GVHIADVSY
Sbjct: 377 NPWSIPEEEFAVRRDIRFSHRSC--SIDPPGSKDVDDVLSVSDLENGMVEIGVHIADVSY 434
Query: 554 FVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAG- 612
FV G+ LD+EA+ R T+VYM+ + MLP +LSE + SL G DRLA S+ W L+
Sbjct: 435 FVKQGSLLDLEARSRGTTVYMVGKSWHMLPSVLSENLCSLVGGKDRLAVSVIWTLDRQNN 494
Query: 613 -DVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSI 671
+VV W GRT+IRS +L Y A+ I++GK L GW G + S + +
Sbjct: 495 FEVVKTWFGRTIIRSRYQLFYAQAETIMEGK-------RLLPGWEIKSGSNDLSQLQSDL 547
Query: 672 KSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLAN 731
L ++ + R +GAL L +++ F DE P +N++ E M+ AN
Sbjct: 548 LLLGTFAQSRRLFRRLNGALELASTELKFEIDERREPVQVETKVELPMNWIVAEMMIYAN 607
Query: 732 KTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREK 791
E I RAFP ALLR+H P K+ F T+ Q SL++ R+
Sbjct: 608 ACVGEKIYRAFPSCALLRKHSPP---KIDSF------------TTLLEQLAASLDRMRD- 651
Query: 792 LKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 851
D+V+ A YF +G+ + + + HY LA YTHFTSP+RRY D++
Sbjct: 652 -SGDFVVE-------------AEYFSTGEDLEPSHFYHYGLALEFYTHFTSPIRRYADIL 697
Query: 852 VHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAAL 911
HR L AA + + L +GI S+E +E
Sbjct: 698 AHRMLIAACQEQNLE---------------------SGIVKVPHIMSSIELQE------- 729
Query: 912 KYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKK 954
VA H N++ + + C +LY+ + L+K+
Sbjct: 730 ------------VAEHVNEKHRTSKRAQKECNELYLLMFLQKQ 760
Score = 40.0 bits (92), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYC----KIEGVQTDVLITGIAAQNR 214
++ H S ++ + +GD ++ VN H EA K E + ++++ G QNR
Sbjct: 148 LYKEHLSTISLEAGISRGDLRVGVFFVNRHAPSEALVRPSNKGEASRLEIVVAGRVLQNR 207
Query: 215 AVEGDFVLIKVDRLSL 230
A+ GD V++K +L L
Sbjct: 208 AIHGDTVVVKTCKLRL 223
>gi|53715849|ref|YP_101841.1| ribonuclease R [Bacteroides fragilis YCH46]
gi|60683768|ref|YP_213912.1| exoribonuclease [Bacteroides fragilis NCTC 9343]
gi|265764716|ref|ZP_06092991.1| ribonuclease R [Bacteroides sp. 2_1_16]
gi|336407528|ref|ZP_08588025.1| ribonuclease R [Bacteroides sp. 2_1_56FAA]
gi|375360672|ref|YP_005113444.1| putative exoribonuclease [Bacteroides fragilis 638R]
gi|383116347|ref|ZP_09937097.1| ribonuclease R [Bacteroides sp. 3_2_5]
gi|423248016|ref|ZP_17229032.1| ribonuclease R [Bacteroides fragilis CL03T00C08]
gi|423252967|ref|ZP_17233898.1| ribonuclease R [Bacteroides fragilis CL03T12C07]
gi|423259671|ref|ZP_17240594.1| ribonuclease R [Bacteroides fragilis CL07T00C01]
gi|423263354|ref|ZP_17242357.1| ribonuclease R [Bacteroides fragilis CL07T12C05]
gi|423270099|ref|ZP_17249071.1| ribonuclease R [Bacteroides fragilis CL05T00C42]
gi|423272445|ref|ZP_17251392.1| ribonuclease R [Bacteroides fragilis CL05T12C13]
gi|423282684|ref|ZP_17261569.1| ribonuclease R [Bacteroides fragilis HMW 615]
gi|52218714|dbj|BAD51307.1| ribonuclease R [Bacteroides fragilis YCH46]
gi|60495202|emb|CAH10023.1| putative exoribonuclease [Bacteroides fragilis NCTC 9343]
gi|251948396|gb|EES88678.1| ribonuclease R [Bacteroides sp. 3_2_5]
gi|263254100|gb|EEZ25534.1| ribonuclease R [Bacteroides sp. 2_1_16]
gi|301165353|emb|CBW24925.1| putative exoribonuclease [Bacteroides fragilis 638R]
gi|335947432|gb|EGN09223.1| ribonuclease R [Bacteroides sp. 2_1_56FAA]
gi|387775981|gb|EIK38084.1| ribonuclease R [Bacteroides fragilis CL07T00C01]
gi|392657494|gb|EIY51127.1| ribonuclease R [Bacteroides fragilis CL03T12C07]
gi|392660890|gb|EIY54488.1| ribonuclease R [Bacteroides fragilis CL03T00C08]
gi|392699644|gb|EIY92818.1| ribonuclease R [Bacteroides fragilis CL05T00C42]
gi|392707649|gb|EIZ00765.1| ribonuclease R [Bacteroides fragilis CL07T12C05]
gi|392708875|gb|EIZ01977.1| ribonuclease R [Bacteroides fragilis CL05T12C13]
gi|404582252|gb|EKA86947.1| ribonuclease R [Bacteroides fragilis HMW 615]
Length = 714
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 156/432 (36%), Positives = 224/432 (51%), Gaps = 45/432 (10%)
Query: 441 AARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPW 499
++ EW +++ P VL + G+ G+ +++AIL E + P+S+ +P
Sbjct: 192 VVKVTEWPDKAKNPIGQVLDILGKAGDNTTEMHAILAEFGLPY--VYPQSVEKAADKIPA 249
Query: 500 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 559
E+ EE+ R+D R FTIDP A D DDALSI L DG+ VGVHIADV+++V G+
Sbjct: 250 EISAEEIARREDFRKVTTFTIDPKDAKDFDDALSIRPLKDGLWEVGVHIADVTHYVKEGS 309
Query: 560 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 619
+D EA+ R+TSVY++ R IPMLP L + SL P ++LAFS +D+ G+V D I
Sbjct: 310 IIDKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPNEEKLAFSAIFDITEKGEVRDSRI 369
Query: 620 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 679
TVI S + +YE AQ II+ K EG D I L ++K
Sbjct: 370 VHTVIESDRRFTYEEAQQIIETK----------EG-----------DFKDEILMLDTIAK 408
Query: 680 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 739
L++KRFT GA+ + + F DE G P +D N L EEFMLLAN+T AE I
Sbjct: 409 ALREKRFTAGAINFDRYEVKFEIDEKGKPISVYFKESKDANKLVEEFMLLANRTVAEKIG 468
Query: 740 RAFPDSAL----LRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQARE 790
+A R H P+ KL F ++ G +L TS S + L+ +
Sbjct: 469 KAPKGKKPKVLPYRIHDLPDPEKLDNLAQFIARFGYRLRTSGTKTDVSKSINHLLDDIQG 528
Query: 791 KLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDL 850
K ++ +++ + R MQ A Y + GHY LAF YTHFTSP+RR+PD+
Sbjct: 529 KKEE-----NLIETVSIRAMQKARYSTH-------NIGHYGLAFDYYTHFTSPIRRFPDM 576
Query: 851 VVHRTLNAALEA 862
+VHR + ++
Sbjct: 577 MVHRLVTRYMDG 588
>gi|423214392|ref|ZP_17200920.1| ribonuclease R [Bacteroides xylanisolvens CL03T12C04]
gi|392692807|gb|EIY86043.1| ribonuclease R [Bacteroides xylanisolvens CL03T12C04]
Length = 718
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 147/431 (34%), Positives = 226/431 (52%), Gaps = 45/431 (10%)
Query: 442 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWE 500
++ EW +++ P ++ + G+ G+ +++AIL E + P+++ + +P E
Sbjct: 196 VKVTEWPDKAKNPIGQIIDILGQAGDNTTEMHAILAEFGLPY--VYPKAVETAADKIPAE 253
Query: 501 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 560
+ EE+ R+D R FTIDP A D DDALSI +L DG+ VGVHIADV+++V G
Sbjct: 254 ISAEEIAKREDFRKVTTFTIDPKDAKDFDDALSIRKLKDGLWEVGVHIADVTHYVKEGGI 313
Query: 561 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIG 620
+D EA+ R+TSVY++ R IPMLP L + SL P ++LAFS+ +D+ G++ D I
Sbjct: 314 IDKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPNEEKLAFSVIFDITEKGEIKDSRIV 373
Query: 621 RTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKI 680
TVI S + +YE AQ II+ K EG D + +L ++K
Sbjct: 374 HTVINSDRRFTYEEAQQIIETK----------EG-----------DFKEEVLTLDTIAKA 412
Query: 681 LKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR 740
L++KRF+ GA+ + + F DE G P +D N L EEFMLLAN+T AE + +
Sbjct: 413 LREKRFSAGAINFDRYEVKFEIDEKGKPISVYFKESKDANKLVEEFMLLANRTVAEFVGK 472
Query: 741 AFPDSAL----LRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREK 791
+ R H P+ KL F ++ G ++ TS S + L+ K
Sbjct: 473 VPKNKKPKVLPYRIHDLPDPEKLENLSQFIARFGYKVRTSGTKTDISKSINHLLDDIHGK 532
Query: 792 LKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 851
++ +++ + R MQ A Y + GHY LAF YTHFTSP+RR+PD++
Sbjct: 533 KEE-----NLIETVSIRAMQKARYSTH-------NIGHYGLAFEYYTHFTSPIRRFPDMM 580
Query: 852 VHRTLNAALEA 862
VHR + ++
Sbjct: 581 VHRLVTKYMDG 591
>gi|383115522|ref|ZP_09936278.1| ribonuclease R [Bacteroides sp. D2]
gi|313695072|gb|EFS31907.1| ribonuclease R [Bacteroides sp. D2]
Length = 718
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 149/431 (34%), Positives = 225/431 (52%), Gaps = 45/431 (10%)
Query: 442 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWE 500
++ EW +++ P V+ + G+ G+ +++AIL E + P+++ + +P E
Sbjct: 196 VKVTEWPDKAKNPIGQVIDILGQAGDNTTEMHAILAEFGLPY--VYPKAVETAADKIPAE 253
Query: 501 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 560
+ EE+ R+D R FTIDP A D DDALSI +L DG+ VGVHIADV+++V G
Sbjct: 254 ISAEEIAKREDFRKTTTFTIDPKDAKDFDDALSIRKLKDGLWEVGVHIADVTHYVKEGGI 313
Query: 561 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIG 620
+D EA+ R+TSVY++ R IPMLP L + SL P ++LAFS+ +D+ G+V D I
Sbjct: 314 IDKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPNEEKLAFSVIFDITEKGEVRDSRIV 373
Query: 621 RTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKI 680
TVI S + +YE AQ II+ K EG D + +L ++K
Sbjct: 374 HTVINSDRRFTYEEAQQIIETK----------EG-----------DYKEEVLTLDTIAKA 412
Query: 681 LKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR 740
L++KRF GA+ + + F DE G P +D N L EEFMLLAN+T AE + +
Sbjct: 413 LREKRFAAGAINFDRYEVKFEIDEKGKPISVYFKESKDANKLVEEFMLLANRTVAEFVGK 472
Query: 741 AFPDSAL----LRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREK 791
+ R H P+ KL F ++ G ++ TS S + L+ K
Sbjct: 473 VPKNKKPKVLPYRIHDLPDPEKLENLSQFIARFGYKVRTSGTKTDISKSINHLLDDIHGK 532
Query: 792 LKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 851
++ +++ + R MQ A Y + GHY LAF YTHFTSP+RR+PD++
Sbjct: 533 KEE-----NLIETVSIRAMQKARYSTH-------NIGHYGLAFEYYTHFTSPIRRFPDMM 580
Query: 852 VHRTLNAALEA 862
VHR + ++
Sbjct: 581 VHRLVTKYMDG 591
>gi|260061306|ref|YP_003194386.1| ribonuclease R [Robiginitalea biformata HTCC2501]
gi|88785438|gb|EAR16607.1| ribonuclease R [Robiginitalea biformata HTCC2501]
Length = 727
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 166/522 (31%), Positives = 251/522 (48%), Gaps = 58/522 (11%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 407
+P G+VV ++ER R++ VG ++ ++ F + + PT
Sbjct: 133 KPEGKVVRVVER--RKNAFVGIVDQSKSFAF------------------------VRPTD 166
Query: 408 PK-YPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 466
+ Y + V + DL + + E V I W E++ P V V G G
Sbjct: 167 SRMYTDIFVSLDDL-----------NGAKDKEKVLVEIKSWPEDADSPYGKVTQVLGVPG 215
Query: 467 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 526
E +I+AIL E + F E + + E+ R+D+R+ FTIDP A
Sbjct: 216 EHNTEIHAILAEYGLPYE-FPAEVEHYANSLDTRIHPNEVSKRRDMRDTLTFTIDPKDAK 274
Query: 527 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 586
D DDALS L G +G+HIADVS+++ + L+ EA R+TSVY++ R +PMLP +L
Sbjct: 275 DFDDALSFRELDGGDYEIGIHIADVSHYLNEDSILEEEAYNRATSVYLVDRVVPMLPEIL 334
Query: 587 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIID-GKFDV 645
S SL P D+ FS + ++ V D+W GRTV S + +YE AQ +I+ G+ +
Sbjct: 335 SNNACSLRPHEDKYTFSAVFIMDDQARVKDQWFGRTVTHSNERFAYEEAQHVIETGRGSI 394
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEY 705
+ ++ Q+ G+ +V +I ++ ++++ ++ R GA+ + + F DE
Sbjct: 395 PADISIRGKAYQISGE-----IVNAIYTMDQLARKMRKLRMQHGAISFDKVEVKFNLDEE 449
Query: 706 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRR-HPAPNMRKLREFEA 764
P +D N L EEFMLLAN+ AE I + P + R H P+ KL
Sbjct: 450 NNPVGVFFKESKDANKLIEEFMLLANRKVAEFIGKQQPKKTFVYRVHDEPDEDKLIALNG 509
Query: 765 FCSKHGLQLDTSSSGQFHQSLEQAREKLK--DDYVLFDILINYATRPMQLASYFCSGDFK 822
+ G QL+ + + SL Q E +K + L D L A R M ASY
Sbjct: 510 IVKRFGHQLNFKNKKNLNHSLNQLLEDVKGRKEQNLVDTL---AIRSMSKASYTTD---- 562
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
+ GHY LAF YTHFTSP+RRYPD++VHR L+ L K
Sbjct: 563 ---NIGHYGLAFDYYTHFTSPIRRYPDVMVHRLLHQYLNGAK 601
>gi|218131623|ref|ZP_03460427.1| hypothetical protein BACEGG_03243 [Bacteroides eggerthii DSM 20697]
gi|217985926|gb|EEC52265.1| ribonuclease R [Bacteroides eggerthii DSM 20697]
Length = 719
Score = 244 bits (623), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 152/430 (35%), Positives = 223/430 (51%), Gaps = 45/430 (10%)
Query: 442 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWE 500
++ EW +++ P V+ + G+ G+ +++AIL E + P S+ +P E
Sbjct: 197 VKVVEWPDKAKNPIGQVIDILGKAGDNTTEMHAILAEFGLPY--VYPASVEKAADKIPAE 254
Query: 501 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 560
+P EE R+D RN TIDP A D DDALS+ +L D + VGVHIADV+++V +
Sbjct: 255 IPAEEYAKREDFRNITTLTIDPKDAKDFDDALSVRKLKDNLWEVGVHIADVTHYVTEDSI 314
Query: 561 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIG 620
+D EA+ R+TSVY++ R IPMLP L + SL P ++LA+S +++ G++ + I
Sbjct: 315 IDKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPNEEKLAYSAIFEMTDKGEIKNSRIV 374
Query: 621 RTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKI 680
TVI+S + +YE AQ II+ K EG D I L ++KI
Sbjct: 375 HTVIKSDRRFTYEEAQQIIETK----------EG-----------DFKEEILKLDALAKI 413
Query: 681 LKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR 740
L++KRF GA+ + + F DE G P +D N L EEFMLLAN+T AE I R
Sbjct: 414 LREKRFAAGAINFDRYEVKFEIDEKGKPISVYFKESKDANKLVEEFMLLANRTVAEKIGR 473
Query: 741 A----FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREK 791
P R H P+ KL F ++ G +L TS S + L+ + K
Sbjct: 474 VPKSKKPKVFPYRIHDLPDPEKLDNLSQFIARFGYKLRTSGTKTDVSKSINHLLDDIQGK 533
Query: 792 LKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 851
++ +++ + R MQ A Y + GHY L+F YTHFTSP+RRYPD++
Sbjct: 534 KEE-----NLIETVSIRAMQKARYSVH-------NIGHYGLSFDYYTHFTSPIRRYPDML 581
Query: 852 VHRTLNAALE 861
VHR L L+
Sbjct: 582 VHRLLTKYLD 591
>gi|189499728|ref|YP_001959198.1| ribonuclease R [Chlorobium phaeobacteroides BS1]
gi|189495169|gb|ACE03717.1| ribonuclease R [Chlorobium phaeobacteroides BS1]
Length = 795
Score = 244 bits (623), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 178/523 (34%), Positives = 257/523 (49%), Gaps = 77/523 (14%)
Query: 345 PTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLT 404
P +R G + +I+RS IVG L + NR PD + I
Sbjct: 198 PHQRCEGLITKVIDRSLH--SIVGTL---------------VRNNRKFTLAPDLKKI--- 237
Query: 405 PTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGR 464
P++ V +KD G A+ ++V +D +++ +A VL V G
Sbjct: 238 -----LPEINVRIKD----------SGGASDGQKVVVGNLD--FQKNGVIRAVVLEVLGD 280
Query: 465 GGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPST 524
G + +++AI I S F E L+ + V + ++ R D+R+ +FTIDP
Sbjct: 281 AGSSQVEVSAIARSKGIDES-FDEELLTYVESVSDHISDADIEGRLDIRDKNVFTIDPVD 339
Query: 525 ATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPV 584
A D DDALSI+ LS G+ R+GVHIADVS++V + LD EAQ R+TSVY++ R IPMLP
Sbjct: 340 AKDFDDALSIQTLSRGLYRIGVHIADVSHYVSEDSPLDREAQKRATSVYLVDRVIPMLPA 399
Query: 585 LLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFD 644
LSE++ SLNPGVDR+AFS+F+ + + G+V+ + +TVI S + +YE Q++
Sbjct: 400 RLSEQICSLNPGVDRMAFSVFFKMKADGEVLQQEFVKTVINSKRRFTYEDVQEV------ 453
Query: 645 VESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDE 704
L G + Y + D +S L++ R ++G L E + F
Sbjct: 454 ------LNNGKGKYYKELHLLDT---------ISTRLRETRLSEGGLEFETEEVRFKLGS 498
Query: 705 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAF------PDSALLRRHPAPNMRK 758
G P + V R + L EEFMLLAN+ AE I+ F ++ R H AP K
Sbjct: 499 KGEPVEVVKKERLGSHRLIEEFMLLANRKVAEYISTKFMLKDKQSQPSIYRVHGAPQEEK 558
Query: 759 LREFEAFCSKHG--LQLDTSSSGQFHQSLEQA-REKLKDDY-VLFDILIN-YATRPMQLA 813
+ F + G L+LD + G + QA R LK + + L+N R M A
Sbjct: 559 VAILTNFVRRIGYTLKLDGKAKGGAPKVSSQALRNLLKQVHGTNVEFLVNELVLRSMAKA 618
Query: 814 SYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTL 856
Y + D GH+ L F YTHFTSP+RRYPDL+VHR L
Sbjct: 619 LYTSAND-------GHFGLGFEHYTHFTSPIRRYPDLMVHRLL 654
>gi|390945738|ref|YP_006409498.1| RNAse R [Alistipes finegoldii DSM 17242]
gi|390422307|gb|AFL76813.1| RNAse R [Alistipes finegoldii DSM 17242]
Length = 743
Score = 244 bits (623), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 145/426 (34%), Positives = 214/426 (50%), Gaps = 37/426 (8%)
Query: 438 ELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV 497
E V RI +W E S P ++ G G + +++AIL E + F PE +
Sbjct: 191 EKVVVRIADWAEGSKSPVGELVERLGMAGNNDTEMHAILAEYELPYR-FDPEIEQAAEAI 249
Query: 498 PWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLP 557
+ +E+ +R+D R FT+DP+ A D DDALS+ R+ DG+ +GVHIADV+++V P
Sbjct: 250 DGSITAKEIAARRDFRQVTTFTVDPADAKDFDDALSVRRVRDGVWEIGVHIADVTHYVRP 309
Query: 558 GTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR 617
+ +D EA R TSVY++ R +PMLP LS E+ SL P L FS + LN D+++
Sbjct: 310 QSTIDDEAVERGTSVYLVDRTVPMLPERLSNELCSLRPHETSLCFSAVFTLNENLDILEE 369
Query: 618 WIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEV 677
W GRTVI S + +Y AQ++I+ G G D I +L +
Sbjct: 370 WFGRTVIYSDRRFTYAEAQEVIE----------TGRG-----------DYAEEILTLNRL 408
Query: 678 SKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEV 737
++ L+ +RF +GA+ + + F DE G P +++ N + EEFMLLAN+ AE
Sbjct: 409 AQALRRQRFKNGAISFDREEVKFKLDETGKPLGVYFKEQKESNQMIEEFMLLANRRVAEF 468
Query: 738 IARAFPDSA-------LLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQARE 790
+ D + R H +P+ KL F F + G + + L +
Sbjct: 469 CGKRKTDKGRTVERPMVYRVHDSPSEEKLDRFRQFILRFGHIFKATKGRAIAKELNKLFA 528
Query: 791 KLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDL 850
++K + + A R M A Y + GHY LAFP YTHFTSP+RRYPD+
Sbjct: 529 QIKGT-TEENAVSTMAVRSMAKAYYTTD-------NIGHYGLAFPYYTHFTSPIRRYPDM 580
Query: 851 VVHRTL 856
+VHR L
Sbjct: 581 MVHRLL 586
>gi|380692948|ref|ZP_09857807.1| ribonuclease R [Bacteroides faecis MAJ27]
Length = 718
Score = 244 bits (623), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 148/431 (34%), Positives = 221/431 (51%), Gaps = 45/431 (10%)
Query: 442 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWE 500
++ EW +++ P V+ + G+ G+ +++AIL E + P+++ + +P E
Sbjct: 196 VKVTEWPDKAKNPIGQVIDILGKAGDNTTEMHAILAEFGLPY--VYPKAVETAADKIPAE 253
Query: 501 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 560
+ EE+ R+D R FTIDP A D DDALSI + DG+ VGVHIADV+++V G
Sbjct: 254 ITPEEIARREDFRKVTTFTIDPKDAKDFDDALSIRPIKDGLWEVGVHIADVTHYVKEGGI 313
Query: 561 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIG 620
+D EA+ R+TSVY++ R IPMLP L + SL P ++LAFS+ +D+ G+V D I
Sbjct: 314 IDKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPNEEKLAFSVIFDITEKGEVRDSRIV 373
Query: 621 RTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKI 680
TVI S + +YE AQ II+ K D + L ++K
Sbjct: 374 HTVINSDRRFTYEEAQQIIETK---------------------AGDFKEEVLMLDTIAKA 412
Query: 681 LKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR 740
L++KRF GA+ + + F DE G P +D N L EEFMLLAN+T AE + R
Sbjct: 413 LREKRFAAGAINFDRYEVKFEIDEKGKPISVYFKESKDANKLVEEFMLLANRTVAEKVGR 472
Query: 741 A----FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREK 791
P R H P+ KL F ++ G ++ TS S + L+ K
Sbjct: 473 VPKNKKPKVLPYRIHDLPDPEKLENLSQFIARFGYKVRTSGTKTDISKSINHLLDDIHGK 532
Query: 792 LKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 851
++ +++ + R MQ A Y + GHY LAF YTHFTSP+RR+PD++
Sbjct: 533 KEE-----NLIETVSIRAMQKARYSTH-------NIGHYGLAFDYYTHFTSPIRRFPDMM 580
Query: 852 VHRTLNAALEA 862
VHR + ++
Sbjct: 581 VHRLVTKYMDG 591
>gi|322697987|gb|EFY89761.1| mitotic control protein dis3 [Metarhizium acridum CQMa 102]
Length = 947
Score = 244 bits (623), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 187/534 (35%), Positives = 258/534 (48%), Gaps = 58/534 (10%)
Query: 342 SSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYI 401
SS +PT +VV +I+R+ W Y G + +S ++ +
Sbjct: 331 SSESQLQPTAKVVGVIKRN--------------WRQYVGHIDPSSASKSASSQGRKQDSV 376
Query: 402 QLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHV 461
L P K PK+ + + + + + KRL LV ID W +S P H +
Sbjct: 377 FLIPMDKKIPKIRLRTRQVSELLGKRL----------LVT--IDAWERDSRHPVGHFVRS 424
Query: 462 FGRGGEVEPQINAILYENAICCSGFSPESLSCLPC------VPWEVPQEELLSRKDLRNF 515
G + A+L E + F L CLP VP V R+DLR
Sbjct: 425 LGELETKAAETEALLLEWDVQYRPFPKTVLDCLPKEGHDWKVPASVEDPGWKDREDLRGL 484
Query: 516 CIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYML 575
I +IDP D+DDAL +L +G VGVHIADVS+FV P A+D EA +R T+VY++
Sbjct: 485 LICSIDPVGCQDIDDALHARKLPNGNFEVGVHIADVSHFVKPANAMDTEASIRGTTVYLV 544
Query: 576 QRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHA 635
++I MLP LL ++ SL P V+R AFS+ W+LN D+V+ ++VI+S SYE A
Sbjct: 545 DKRIDMLPPLLGTDLCSLKPYVERYAFSVLWELNDNADIVNVRFTKSVIKSREAFSYEQA 604
Query: 636 QDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLEN 695
Q ID D + L G ++ L +SK LK KR GAL L +
Sbjct: 605 QLRID---DTSQQDELTNG----------------MRMLLALSKKLKKKRMDAGALSLSS 645
Query: 696 SK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAP 754
+ V + E P D D N L EEFML AN + A I AFP +A+LRRH P
Sbjct: 646 PEVKVQMESETSDPIDVKTKELLDTNSLVEEFMLFANVSVAAKIYDAFPQTAILRRHAPP 705
Query: 755 NMRKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQL 812
E + K G +L T +S SL+ +K D + F+ L+ ATR M
Sbjct: 706 PKTNFDELADQLRVKRGFELRTDTSKALADSLDACVDK-SDPF--FNTLVRIMATRCMMS 762
Query: 813 ASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
A YFCSG + ++ HY LA +YTHFTSP+RRY DL+ HR L AA+ E ++
Sbjct: 763 AEYFCSGT-QAYPEFRHYGLASEIYTHFTSPIRRYADLLAHRQLAAAIGYEAVH 815
Score = 41.2 bits (95), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
++ ++S+ + ++ G + ++ V+ +N LE K+ +LI G + NRAV+G
Sbjct: 212 LYPEYFSLSRMMTGVKAGLMHQGIFNVSPYNYLEGSIKVPAFSKPLLILGRESINRAVDG 271
Query: 219 DFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSD 259
D V++++ W + ++ I+E+ N+ N D
Sbjct: 272 DVVVVEMLPQDKWK-----APSTKIIEEDNITKNENADTED 307
>gi|194336956|ref|YP_002018750.1| ribonuclease R [Pelodictyon phaeoclathratiforme BU-1]
gi|194309433|gb|ACF44133.1| ribonuclease R [Pelodictyon phaeoclathratiforme BU-1]
Length = 770
Score = 244 bits (623), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 160/428 (37%), Positives = 224/428 (52%), Gaps = 43/428 (10%)
Query: 455 QAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRN 514
QA VL + G G+ +++AI I + F L + + E+L R D+R+
Sbjct: 248 QAKVLEILGTAGDSAVEVSAIARSRGIDET-FDKPLLDFAASIREGITDEDLKGRLDIRD 306
Query: 515 FCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYM 574
+FTIDP A D DDALSIE L DG ++GVHIADVS++V + LD EA R+TSVY+
Sbjct: 307 KVVFTIDPVDAKDFDDALSIEMLEDGQYKIGVHIADVSHYVPENSPLDREALKRATSVYL 366
Query: 575 LQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEH 634
+ R IPMLP LSE++ SLNPGVDR+AFS+F L++ G+V +TVI S + +YE
Sbjct: 367 VDRVIPMLPARLSEQICSLNPGVDRMAFSVFLTLSADGEVRKHEFNKTVIHSKRRFAYE- 425
Query: 635 AQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLE 694
DVE G+G D V +++L +S +L++KRF G L E
Sbjct: 426 ---------DVEEILKQGKG-----------DFVDELQALDRLSVLLREKRFKHGGLDFE 465
Query: 695 NSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAF------PDSALL 748
+ F G P + + R + L EEFMLLAN+ A+ + + F P +
Sbjct: 466 TEEVRFKLGSKGEPLEVMKKERLGSHRLIEEFMLLANRKVAKYLTKTFKENKKEPQPVIY 525
Query: 749 RRHPAPNMRKLREFEAFCSKHG--LQLDTSSSGQF--HQSLEQAREKLKDDYVLFDILIN 804
R H AP K+ F + G L+L+ G +L Q +++K + F ++
Sbjct: 526 RVHGAPQQEKVLILANFVKRLGFDLKLNRGKEGPIVSASALRQLLQQVKGSNIEF-LVSE 584
Query: 805 YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
R M A Y +GD + GHY L F YTHFTSP+RRYPDL+VHR L E E
Sbjct: 585 LVLRCMSKAVY--TGD-----NVGHYGLGFEHYTHFTSPIRRYPDLIVHRML---FEYEN 634
Query: 865 LYWKHRRM 872
L K R++
Sbjct: 635 LRKKRRKI 642
>gi|334365680|ref|ZP_08514630.1| ribonuclease R [Alistipes sp. HGB5]
gi|313158113|gb|EFR57518.1| ribonuclease R [Alistipes sp. HGB5]
Length = 743
Score = 244 bits (623), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 146/426 (34%), Positives = 214/426 (50%), Gaps = 37/426 (8%)
Query: 438 ELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV 497
E V RI +W E S P ++ G G + +++AIL E + F PE +
Sbjct: 191 EKVVVRIADWAEGSKSPVGELVERLGMAGNNDTEMHAILAEYELPYR-FDPEIEQAAEAI 249
Query: 498 PWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLP 557
+ +E+ +R+D R FT+DP+ A D DDALS+ R+ DGI +GVHIADV+++V P
Sbjct: 250 DGSITAKEIAARRDFRQVTTFTVDPADAKDFDDALSVRRVRDGIWEIGVHIADVTHYVRP 309
Query: 558 GTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR 617
+ +D EA R TSVY++ R +PMLP LS E+ SL P L FS + LN D+++
Sbjct: 310 QSTIDDEAVERGTSVYLVDRTVPMLPERLSNELCSLRPHETSLCFSAVFTLNENLDILEE 369
Query: 618 WIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEV 677
W GRTVI S + +Y AQ++I+ G G D I +L +
Sbjct: 370 WFGRTVIYSDRRFTYAEAQEVIE----------TGRG-----------DYAEEILTLNRL 408
Query: 678 SKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEV 737
++ L+ +RF +GA+ + + F DE G P +++ N + EEFMLLAN+ AE
Sbjct: 409 AQALRRQRFKNGAISFDREEVKFKLDETGKPLGVYFKEQKESNQMIEEFMLLANRRVAEF 468
Query: 738 IARAFPDSA-------LLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQARE 790
+ D + R H +P+ KL F F + G + + L +
Sbjct: 469 CGKRKTDKGRTVERPMVYRVHDSPSEEKLDRFRQFILRFGHIFKATKGRAIAKELNKLFA 528
Query: 791 KLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDL 850
++K + + A R M A Y + GHY LAFP YTHFTSP+RRYPD+
Sbjct: 529 QIKGT-TEENAVSTMAVRSMAKAYYTTD-------NIGHYGLAFPYYTHFTSPIRRYPDM 580
Query: 851 VVHRTL 856
+VHR L
Sbjct: 581 MVHRLL 586
>gi|441495903|ref|ZP_20978141.1| 3'-to-5' exoribonuclease RNase R [Fulvivirga imtechensis AK7]
gi|441440438|gb|ELR73703.1| 3'-to-5' exoribonuclease RNase R [Fulvivirga imtechensis AK7]
Length = 719
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 161/518 (31%), Positives = 250/518 (48%), Gaps = 71/518 (13%)
Query: 347 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 406
++P G+V+ IIER+ +D VG + +
Sbjct: 136 RKPEGKVIEIIERA--KDQFVGRIEFS--------------------------------- 160
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 466
P++ ++ + + I +L+ + V +I EW P+ V++V G G
Sbjct: 161 -PRFAFVIADNRKIYQDIFVKLDATKGAAHNDKVIVKITEWPGPDRSPEGEVINVLGPAG 219
Query: 467 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 526
+ E +I++I+ E + F + ++ ++E+ RKD R+ FTIDP A
Sbjct: 220 DNEAEIHSIMAEFDLPFE-FPQHVEKEAEKISEKITKQEIEKRKDFRDVLTFTIDPEDAK 278
Query: 527 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 586
D DDALS + L +G +GVHIADV+++V PGT L+ EA R+TSVY++ R +PMLP L
Sbjct: 279 DFDDALSFKNLENGNFEIGVHIADVTHYVQPGTILEQEAFDRATSVYLVDRTVPMLPERL 338
Query: 587 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 646
S + SL P D+L F+ ++++ +V+ W GRT+I S + +YE AQ I+
Sbjct: 339 SNGLCSLRPKEDKLTFAAVFEMDEEANVIKEWFGRTIIHSDRRFTYEEAQGGIE------ 392
Query: 647 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYG 706
G G D + ++ L +++K L+ +RF GA+ E ++ F DE G
Sbjct: 393 ----TGVG-----------DYAKELQKLNDLAKKLRKERFNRGAVNFETTEVKFKLDEKG 437
Query: 707 TPYDSVLSGREDLNFLFEEFMLLANKTAAEVI----ARAFPDSALLRRHPAPNMRKLREF 762
P + R+D + L EEFMLLANK A + ++ + R H P+ K+ F
Sbjct: 438 KPLGVIPKVRKDAHKLIEEFMLLANKKVATFVFGMKKGEDKNTFVYRTHDFPDPEKVGTF 497
Query: 763 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 822
F + G +L T G QSL + ++ ++L A R M A Y
Sbjct: 498 AQFAKRFGHELKT-DQGAISQSLNKLMTSIEGKPEE-NVLQQLAIRSMAKAKYTTEA--- 552
Query: 823 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
GH+ LAFP YTHFTSP+RRYPD++VHR L L
Sbjct: 553 ----TGHFGLAFPHYTHFTSPIRRYPDMMVHRLLQHYL 586
>gi|409199123|ref|ZP_11227786.1| RNAse r [Marinilabilia salmonicolor JCM 21150]
Length = 720
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 178/557 (31%), Positives = 261/557 (46%), Gaps = 81/557 (14%)
Query: 320 EKVSSSQQNDGMNAIERLSAMISSYPTKR---PTGRVVSIIERSPRRDGIVGFLNVNQWF 376
E + SQ N G +A+ + Y KR G VV I+ERS RD VG L V+ F
Sbjct: 105 EDIFVSQNNLG-HALNGDRVKVLQYARKRNRQAEGEVVEILERS--RDQFVGTLEVSDNF 161
Query: 377 NYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIE 436
+ D++ + +P P+ + + A +
Sbjct: 162 AFLVA---DSRVMHHDIFIP------------------------PNQLNGGKQGQKAVV- 193
Query: 437 MELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC 496
I EW E++ P V+ V G G+ +++AIL E + + + +
Sbjct: 194 ------CITEWPEKAKNPIGKVVDVLGDPGDNNTEMHAILAEFNLPYK-YPEKVVEAAEK 246
Query: 497 VPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVL 556
+ ++P EE+ R+D R FTIDP+ A D DDALS+++L +G VGVHIADV+++V
Sbjct: 247 IQDKLPVEEIKKRRDFRKVTTFTIDPADAKDFDDALSVQKLKNGHWEVGVHIADVTHYVT 306
Query: 557 PGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD 616
P T LD EA R+TSVY++ R +PMLP LS E+ SL P D+L FS ++++ G V D
Sbjct: 307 PDTILDKEAVSRATSVYLVDRVVPMLPERLSNELCSLRPNEDKLCFSAVFEMDDQGVVFD 366
Query: 617 RWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 676
W+GRTVI S + SYE AQ +I+ L +L +
Sbjct: 367 SWVGRTVIHSDRRFSYEEAQSVIEKGEGELKEEIL---------------------TLND 405
Query: 677 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 736
+++ L+ RF+ GA+ E + F DE G P + ++ N L EEFMLLAN+ AE
Sbjct: 406 LAQKLRSIRFSKGAIDFERVEVKFELDEKGKPLNVFFKEAKEANKLIEEFMLLANRRVAE 465
Query: 737 VIAR--AFPDSA---------LLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSL 785
+I R P++ + R H P+ K F F K G + S SL
Sbjct: 466 IIGRNELTPENKRSSKNSKTFVYRIHDEPDPEKYESFSKFVRKFGFEAAPKQSETISSSL 525
Query: 786 EQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLR 845
+ +++ +I+ A R M A Y + GHY L F YTHFTSP+R
Sbjct: 526 NRVLGEVQGKKQQ-NIVETLAIRTMSKAVYSTH-------NIGHYGLGFKHYTHFTSPIR 577
Query: 846 RYPDLVVHRTLNAALEA 862
RYPD++VHR L L+
Sbjct: 578 RYPDMMVHRLLQRYLDG 594
>gi|194333503|ref|YP_002015363.1| ribonuclease R [Prosthecochloris aestuarii DSM 271]
gi|194311321|gb|ACF45716.1| ribonuclease R [Prosthecochloris aestuarii DSM 271]
Length = 795
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 168/465 (36%), Positives = 242/465 (52%), Gaps = 42/465 (9%)
Query: 403 LTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVF 462
L T+ K+ + L K LP+ I R+++ ++ + V A E+ + +A V+ V
Sbjct: 221 LKRTNRKFVLLPDLKKILPE-ISIRIKDSAGALDGQKVMAGNLEFLKNGSI-RAVVVEVL 278
Query: 463 GRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDP 522
G G +++AI I + F L + + +E+ R D+R+ +FTIDP
Sbjct: 279 GDAGSSAVEVSAIARGLGIDET-FDDPLLKEVASISDSYTEEDFRDRLDIRDKVVFTIDP 337
Query: 523 STATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPML 582
A D DDALS+E L G R+GVHIADVS++V G LDIEAQ RSTSVY++ R IPML
Sbjct: 338 VDAKDFDDALSLEPLPKGHFRIGVHIADVSHYVKEGNLLDIEAQKRSTSVYLVDRVIPML 397
Query: 583 PVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
P LSEE+ SLNP VDRLAFSIF+ ++ G+V+ +TVI S + +YE I++
Sbjct: 398 PSKLSEEICSLNPKVDRLAFSIFFKMSPQGEVLQHEFQKTVINSKRRFTYEEVDAILNA- 456
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
G+ E+ D +K+L ++S+IL++KR +G L E + F
Sbjct: 457 -----------------GKGEYHD---ELKNLDQISRILREKRLDEGGLEFETQEVRFKL 496
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDS------ALLRRHPAPNM 756
G P + + R + L EEFMLLAN+ AE I+ F + ++ R H +P
Sbjct: 497 GSKGEPVEVIKKERLASHRLIEEFMLLANRKVAEYISTRFAEKGKMAYPSIYREHGSPQE 556
Query: 757 RKLREFEAFCSKHGLQLDTSSSGQFHQSLEQA---REKLKDDY-VLFDILIN-YATRPMQ 811
K+ F K G L + G+ + +A R+ LK + + L+N R M
Sbjct: 557 EKVAILANFVKKIGYTLQLTGKGKNGAPVVKAKALRDLLKQVHGTNVEFLVNELVLRSMA 616
Query: 812 LASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTL 856
A Y + D GH+ L F YTHFTSP+RRYPDLVVHR L
Sbjct: 617 KAQYTGTSD-------GHFGLGFEHYTHFTSPIRRYPDLVVHRLL 654
>gi|333029457|ref|ZP_08457518.1| ribonuclease R [Bacteroides coprosuis DSM 18011]
gi|332740054|gb|EGJ70536.1| ribonuclease R [Bacteroides coprosuis DSM 18011]
Length = 723
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 150/427 (35%), Positives = 224/427 (52%), Gaps = 35/427 (8%)
Query: 441 AARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWE 500
++ EW +++ P VL + G+ G + +++AIL E + S + E + E
Sbjct: 192 VVKVIEWPDKAKNPIGEVLDILGKAGNNDTEMHAILAEFGLPYS-YPKEVELFADKISAE 250
Query: 501 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 560
+P++E+ R+D RN FTIDP A D DDALSI +L +G VGVHIADV+++V G
Sbjct: 251 IPKDEIEKREDFRNIATFTIDPKDAKDFDDALSIRQLKNGNWEVGVHIADVTHYVQEGDI 310
Query: 561 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIG 620
+D EA+ R+TS+Y++ R IPMLP L + SL P ++LAFS+ ++L+ AG+V +
Sbjct: 311 IDQEAEKRATSIYLVDRTIPMLPERLCNFICSLRPNEEKLAFSVIFELDEAGEVKHSHVA 370
Query: 621 RTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKI 680
TVI+S + +YE AQ II+ K EG + I L +++
Sbjct: 371 HTVIKSDRRFTYEEAQAIIESK----------EG-----------EYATEILMLNHLAQE 409
Query: 681 LKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR 740
L+ RF+DGAL E + F DE G P ++ N L EEFMLLAN+T AE + +
Sbjct: 410 LRKLRFSDGALNFERVEVKFEIDEKGKPISVYFKESKEANKLIEEFMLLANRTVAEKVGK 469
Query: 741 AFPDSAL----LRRHPAPNMRKLREFEAFCSKHGLQLDTSSS-GQFHQSLEQAREKLKDD 795
+ R H P+ KL F ++ G ++ TS S SL E ++
Sbjct: 470 VGHNKKAKVLPYRIHDLPDPDKLDNLSQFIARFGYKIRTSGSKSTVAHSLNVLLEDIQGK 529
Query: 796 YVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRT 855
+++ + R MQ A Y + GHY LAF YTHFTSP+RRYPD++VHR
Sbjct: 530 KEA-NLIETISIRAMQKARYSTH-------NIGHYGLAFDYYTHFTSPIRRYPDMMVHRL 581
Query: 856 LNAALEA 862
+ ++
Sbjct: 582 ITRYMDG 588
>gi|119357755|ref|YP_912399.1| ribonuclease R [Chlorobium phaeobacteroides DSM 266]
gi|119355104|gb|ABL65975.1| RNAse R [Chlorobium phaeobacteroides DSM 266]
Length = 791
Score = 243 bits (621), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 184/544 (33%), Positives = 269/544 (49%), Gaps = 82/544 (15%)
Query: 343 SYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQ 402
S P +R G V S+++R R IVG L ++NR L PD I
Sbjct: 194 STPHQRCEGIVKSVVKR--RVTTIVGTLT---------------RENRRFLLKPDERKI- 235
Query: 403 LTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVF 462
P +VV +K+ + ++G + EL ++++E A VL V
Sbjct: 236 -------LPVIVVALKNAAKA-----KDGQKVLVGEL------DFSKEGVI-NAKVLEVL 276
Query: 463 GRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDP 522
G G+ + +++AI + I + F + + + E+L+ R D+R+ +FTIDP
Sbjct: 277 GSAGDSQVEVSAIARNHGIDET-FEAPIVEFAQSIRDGITDEDLVGRLDIRDKLVFTIDP 335
Query: 523 STATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPML 582
A D DDALS+E L+ R+GVHIADVS++V + LD EA R+TSVY++ R IPML
Sbjct: 336 VDAKDFDDALSLETLTGNRYRIGVHIADVSHYVPEDSLLDKEAMKRATSVYLVDRVIPML 395
Query: 583 PVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
P LSE++ SLNPGVDR+AFS+F + AG+V + +T I S + +YE Q I+D
Sbjct: 396 PSRLSEQICSLNPGVDRMAFSVFITMTDAGEVEKQEFQKTAIHSKRRFTYEDVQQILDS- 454
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
GEG D V +K L +S L++KRF G L E + F
Sbjct: 455 ---------GEG-----------DFVAELKLLDTLSTTLREKRFKHGGLDFETEEVRFRL 494
Query: 703 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAF------PDSALLRRHPAPNM 756
G P + + R + L EEFMLLAN+ AE + + F P + R H AP +
Sbjct: 495 GSKGEPLEVMKKERLGSHRLIEEFMLLANRKVAEYLTKTFGEGKKTPQPCIYRVHDAPQL 554
Query: 757 RKLREFEAFCSKHG--LQLDTSSSGQF--HQSLEQAREKLKDDYVLFDILIN-YATRPMQ 811
K+ F + G L+L+ G ++L Q ++++ + F L+N R M
Sbjct: 555 EKVVILSNFVKRLGYDLKLNRGKDGPIVTAKALRQLLQQVRGTNLEF--LVNELVLRSMS 612
Query: 812 LASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRR 871
A Y +GD + GHY L F YTHFTSP+RRYPDL++HR L E E L ++
Sbjct: 613 KAVY--TGD-----NAGHYGLGFEHYTHFTSPIRRYPDLIIHRLL---FEYESLRKSRKK 662
Query: 872 MLPK 875
+ K
Sbjct: 663 ITEK 666
>gi|255012826|ref|ZP_05284952.1| ribonuclease R [Bacteroides sp. 2_1_7]
gi|410102247|ref|ZP_11297174.1| ribonuclease R [Parabacteroides sp. D25]
gi|409238969|gb|EKN31757.1| ribonuclease R [Parabacteroides sp. D25]
Length = 728
Score = 243 bits (621), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 154/429 (35%), Positives = 223/429 (51%), Gaps = 45/429 (10%)
Query: 442 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWE 500
RI EW +E+ P V+ + G G+ +++AIL E + P S+ +P
Sbjct: 207 VRIVEWPDEAKNPLGEVIDILGIAGQNTAEMHAILAEFGLPYK--YPSSVEKAADKIPEA 264
Query: 501 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 560
+ EE+ +R+D R FTIDP A D DDALS RL +G VGVHIADV+++V
Sbjct: 265 ISPEEIENREDFRGITTFTIDPKDAKDFDDALSARRLDNGNWEVGVHIADVTHYVKTDGV 324
Query: 561 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIG 620
+D EAQ R+TSVY++ R IPMLP L ++ SL P ++L FS ++LNS V + I
Sbjct: 325 IDKEAQSRATSVYLVDRTIPMLPERLCNQICSLRPDEEKLCFSAVFELNSDAVVQNSRIC 384
Query: 621 RTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKI 680
RT+I+S + +YE AQ++I+ GEG D I +L +++K
Sbjct: 385 RTIIKSDRRFTYEEAQEVIE----------TGEG-----------DYKEEILALNDLAKK 423
Query: 681 LKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR 740
L+++RF GA+ + + F DE G P +D N L EEFMLLAN+T AE + R
Sbjct: 424 LRERRFKSGAINFDRYEVKFEIDEQGKPVRVYFKVSKDANKLIEEFMLLANRTVAEFVGR 483
Query: 741 ----AFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREK 791
+ + R H P+ K+ F +F + G +L T S + L+ + K
Sbjct: 484 PPKGKTKKTFVYRIHELPDPDKMENFASFIRRFGYKLKTDGTKTDVSKGINSLLDNVQGK 543
Query: 792 LKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 851
++ +++ A R MQ A Y + GHY LAF YTHFTSP+RRYPD++
Sbjct: 544 PEE-----NLIETVAIRAMQKARYSTE-------NIGHYGLAFEYYTHFTSPIRRYPDMM 591
Query: 852 VHRTLNAAL 860
VHR L L
Sbjct: 592 VHRLLERYL 600
>gi|150009927|ref|YP_001304670.1| ribonuclease R [Parabacteroides distasonis ATCC 8503]
gi|149938351|gb|ABR45048.1| ribonuclease R [Parabacteroides distasonis ATCC 8503]
Length = 728
Score = 243 bits (621), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 154/429 (35%), Positives = 223/429 (51%), Gaps = 45/429 (10%)
Query: 442 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWE 500
RI EW +E+ P V+ + G G+ +++AIL E + P S+ +P
Sbjct: 207 VRIVEWPDEAKNPLGEVIDILGIAGQNTAEMHAILAEFGLPYK--YPSSVEKAADKIPEA 264
Query: 501 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 560
+ EE+ +R+D R FTIDP A D DDALS RL +G VGVHIADV+++V
Sbjct: 265 ISPEEIENREDFRGITTFTIDPKDAKDFDDALSARRLDNGNWEVGVHIADVTHYVKTDGV 324
Query: 561 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIG 620
+D EAQ R+TSVY++ R IPMLP L ++ SL P ++L FS ++LNS V + I
Sbjct: 325 IDKEAQSRATSVYLVDRTIPMLPERLCNQICSLRPDEEKLCFSAVFELNSDAVVQNSRIC 384
Query: 621 RTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKI 680
RT+I+S + +YE AQ++I+ GEG D I +L +++K
Sbjct: 385 RTIIKSDRRFTYEEAQEVIE----------TGEG-----------DYKEEILALNDLAKK 423
Query: 681 LKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR 740
L+++RF GA+ + + F DE G P +D N L EEFMLLAN+T AE + R
Sbjct: 424 LRERRFKSGAINFDRYEVKFEIDEQGKPVRVYFKVSKDANKLIEEFMLLANRTVAEFVGR 483
Query: 741 ----AFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREK 791
+ + R H P+ K+ F +F + G +L T S + L+ + K
Sbjct: 484 PPKGKTKKTFVYRIHELPDPDKMENFASFIRRFGYKLKTDGTKTDVSKGINSLLDNVQGK 543
Query: 792 LKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 851
++ +++ A R MQ A Y + GHY LAF YTHFTSP+RRYPD++
Sbjct: 544 PEE-----NLIETVAIRAMQKARYSTE-------NIGHYGLAFEYYTHFTSPIRRYPDMM 591
Query: 852 VHRTLNAAL 860
VHR L L
Sbjct: 592 VHRLLERYL 600
>gi|408369475|ref|ZP_11167256.1| ribonuclease R [Galbibacter sp. ck-I2-15]
gi|407745221|gb|EKF56787.1| ribonuclease R [Galbibacter sp. ck-I2-15]
Length = 729
Score = 243 bits (621), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 152/429 (35%), Positives = 227/429 (52%), Gaps = 22/429 (5%)
Query: 438 ELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV 497
ELV + EW +++ P V+ V G GE E +++AIL E + F E +
Sbjct: 188 ELVIVELVEWPKKADSPVGKVVEVLGVPGEHETEMHAILAEYGLPYD-FPLEVTHYANGL 246
Query: 498 PWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLP 557
+ +EE+ R+D+R FTIDP A D DDALS E L DG +G+HIADVSY++
Sbjct: 247 DTSITEEEISKRRDMRKVLTFTIDPKDAKDFDDALSFEPLEDGNFEIGIHIADVSYYMDT 306
Query: 558 GTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR 617
+ L+ EA R+TSVY++ R +PMLP +LS SL P ++ FS + +N+ G ++D+
Sbjct: 307 NSVLEEEAYSRATSVYLVDRVVPMLPEILSNNACSLRPHEEKYTFSAVFKMNNDGQILDK 366
Query: 618 WIGRTVIRSCCKLSYEHAQDIIDGKFDV--ESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 675
W GRTV S + SYE AQ II+ + ++ + + GE + Q E + + +I L
Sbjct: 367 WFGRTVTYSDARFSYEEAQSIIETQSNIIPKRISLTGEEY-----QVE-TQISDAILKLN 420
Query: 676 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 735
+V+KI++ +R GA+ + + F ++ P ++ N L EEFMLLAN+ A
Sbjct: 421 DVAKIMRKRRMDAGAISFDKVEVKFDLNDNNEPIGVYFKTSKEANKLIEEFMLLANRKVA 480
Query: 736 EVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKL--K 793
E I + + + R H P+ KL + + +K G ++D S SL + + K
Sbjct: 481 EYIGKQ-KKTFVYRIHDDPDEEKLMQLQGVIAKFGYRIDMKSKKSLTSSLNSLLDDVQGK 539
Query: 794 DDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVH 853
+ L D L A R M A Y + GHY L F YTHFTSP+RRYPD++VH
Sbjct: 540 KEQNLVDTL---AIRTMSKAIYTTE-------NIGHYGLGFDYYTHFTSPIRRYPDVMVH 589
Query: 854 RTLNAALEA 862
R L L+
Sbjct: 590 RLLQHYLDG 598
>gi|313149833|ref|ZP_07812026.1| ribonuclease R [Bacteroides fragilis 3_1_12]
gi|313138600|gb|EFR55960.1| ribonuclease R [Bacteroides fragilis 3_1_12]
Length = 714
Score = 243 bits (621), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 155/436 (35%), Positives = 224/436 (51%), Gaps = 53/436 (12%)
Query: 441 AARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPW 499
++ EW +++ P VL + G+ G+ +++AIL E + P+S+ +P
Sbjct: 192 VVKVTEWPDKAKNPIGQVLDILGKAGDNTTEMHAILAEFGLPY--VYPQSVEKAADKIPA 249
Query: 500 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 559
E+ EE+ R+D R FTIDP A D DDALSI L +G+ VGVHIADV+++V G+
Sbjct: 250 EISAEEIARREDFRKVTTFTIDPKDAKDFDDALSIRPLKNGLWEVGVHIADVTHYVKEGS 309
Query: 560 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 619
+D EA+ R+TSVY++ R IPMLP L + SL P ++LAFS +D+ G+V D I
Sbjct: 310 IIDKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPNEEKLAFSAIFDITEKGEVRDSRI 369
Query: 620 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 679
TVI S + +YE AQ II+ K EG D I L ++K
Sbjct: 370 VHTVIESDRRFTYEEAQQIIETK----------EG-----------DFKDEILMLDTIAK 408
Query: 680 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVI- 738
L++KRF GA+ + + F DE G P +D N L EEFMLLAN+T AE I
Sbjct: 409 ALREKRFAAGAINFDRYEVKFEIDEKGKPISVYFKESKDANKLVEEFMLLANRTVAEKIG 468
Query: 739 -------ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLE 786
A+ P R H P+ KL F ++ G +L TS S + L+
Sbjct: 469 KVPKGKKAKVLP----YRIHDLPDPEKLDNLAQFIARFGYRLRTSGTKTDVSKSINHLLD 524
Query: 787 QAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRR 846
+ K ++ +++ + R MQ A Y + GHY LAF YTHFTSP+RR
Sbjct: 525 DIQGKKEE-----NLIETVSIRAMQKARYSTH-------NIGHYGLAFDYYTHFTSPIRR 572
Query: 847 YPDLVVHRTLNAALEA 862
+PD++VHR + ++
Sbjct: 573 FPDMMVHRLVTKYMDG 588
>gi|301307807|ref|ZP_07213763.1| ribonuclease R [Bacteroides sp. 20_3]
gi|423339600|ref|ZP_17317340.1| ribonuclease R [Parabacteroides distasonis CL09T03C24]
gi|300834150|gb|EFK64764.1| ribonuclease R [Bacteroides sp. 20_3]
gi|409230254|gb|EKN23121.1| ribonuclease R [Parabacteroides distasonis CL09T03C24]
Length = 728
Score = 243 bits (621), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 154/429 (35%), Positives = 223/429 (51%), Gaps = 45/429 (10%)
Query: 442 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWE 500
RI EW +E+ P V+ + G G+ +++AIL E + P S+ +P
Sbjct: 207 VRIVEWPDEAKNPLGEVIDILGIAGQNTAEMHAILAEFGLPYK--YPSSVEKAADKIPEA 264
Query: 501 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 560
+ EE+ +R+D R FTIDP A D DDALS RL +G VGVHIADV+++V
Sbjct: 265 ISPEEIENREDFRGITTFTIDPKDAKDFDDALSARRLDNGNWEVGVHIADVTHYVKTDGV 324
Query: 561 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIG 620
+D EAQ R+TSVY++ R IPMLP L ++ SL P ++L FS ++LNS V + I
Sbjct: 325 IDKEAQSRATSVYLVDRTIPMLPERLCNQICSLRPDEEKLCFSAVFELNSDAVVQNSRIC 384
Query: 621 RTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKI 680
RT+I+S + +YE AQ++I+ GEG D I +L +++K
Sbjct: 385 RTIIKSDRRFTYEEAQEVIE----------TGEG-----------DYKEEILALNDLAKK 423
Query: 681 LKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR 740
L+++RF GA+ + + F DE G P +D N L EEFMLLAN+T AE + R
Sbjct: 424 LRERRFKSGAINFDRYEVKFEIDEQGKPVRVYFKVSKDANKLIEEFMLLANRTVAEFVGR 483
Query: 741 ----AFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREK 791
+ + R H P+ K+ F +F + G +L T S + L+ + K
Sbjct: 484 PPKGKTKKTFVYRIHELPDPDKMENFASFIRRFGYKLKTDGTKTDVSKGINSLLDNVQGK 543
Query: 792 LKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 851
++ +++ A R MQ A Y + GHY LAF YTHFTSP+RRYPD++
Sbjct: 544 PEE-----NLIETVAIRAMQKARYSTE-------NIGHYGLAFEYYTHFTSPIRRYPDMM 591
Query: 852 VHRTLNAAL 860
VHR L L
Sbjct: 592 VHRLLERYL 600
>gi|242768414|ref|XP_002341564.1| cell wall biogenesis protein phosphatase Ssd1, putative [Talaromyces
stipitatus ATCC 10500]
gi|218724760|gb|EED24177.1| cell wall biogenesis protein phosphatase Ssd1, putative [Talaromyces
stipitatus ATCC 10500]
Length = 1338
Score = 243 bits (621), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 202/726 (27%), Positives = 325/726 (44%), Gaps = 88/726 (12%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R +F P+ + L G + RVN NR +AY + D+ I G +NRA
Sbjct: 392 RKTLFTPYLPQANLPALLSNGQLVAGILRVNKKNRSDAYVTCTELDADIFICGSKDRNRA 451
Query: 216 VEGDFVLIKV-DRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYS 274
+EGDFV +++ D +W++ + DI +S +S
Sbjct: 452 LEGDFVAVELLDVDEVWSQKREKEEKKKR--------------KDITDSRSGDKLSRS-- 495
Query: 275 NCTLLSEKGIHHDDDSSSEAYNQEM-----IEREGYNYINGHHPSTSDSTEKVSSSQQND 329
DS + NQ++ I R G T+K + + +
Sbjct: 496 --------------DSGANGDNQQVGPDGSIRRRGS--------LRQRPTQKKNDDVEVE 533
Query: 330 GMNAIERLSAMISSYPTKRPTGRVVSIIERSPRR--DGIVGFLNVNQWFNYKGGSRKDAK 387
G + + IS G +V++IER + G +G L + + + A
Sbjct: 534 GQSLLLVEEDEISDEQKPLYAGHIVAVIERVAGQMFSGTLGLLRPSSQATKEKQEAERAA 593
Query: 388 KNRSSLSVPDRE-----YIQLTPTHPKYPKMVVLVKDLP-DSIKKRLEEGDATIEMELVA 441
++ DR+ + PT + P + + + P D ++K + + +
Sbjct: 594 RDGGHGRQQDRQQDKPKIVWFKPTDKRVPLIAIPTEQAPRDFVEKHQDYAN-----RIFV 648
Query: 442 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEV 501
A I W S P ++ G G+++ + +A+L +N FS L + W V
Sbjct: 649 ACIKRWPITSLHPFGTLVEQLGEMGDLKVETDALLRDNNFAADEFSEAVLKNVGWEDWTV 708
Query: 502 PQE--ELLS-RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPG 558
E LLS R+D R+ FTIDPS + +LDDA+ I++L+DG VG+H+ADV++FV
Sbjct: 709 ASEGDSLLSNRRDFRDETTFTIDPSGSKELDDAIHIKKLADGKVEVGIHVADVAHFVKAN 768
Query: 559 TALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR- 617
+ +D EA+ R T VY++ R + MLP LS E+ SL PG +RL S+ + +++A VD
Sbjct: 769 SLVDREAKKRGTGVYLMNRVVNMLPPRLSTEICSLLPGQERLTVSVVFKVDTATGAVDDD 828
Query: 618 -WIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRS--IKSL 674
WIG++VI+S KL+Y+ I G ES + L D V + I+ L
Sbjct: 829 VWIGKSVIKSSGKLTYDDVNAAITG----ESGSPL--------------DGVNADDIRLL 870
Query: 675 YEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTA 734
++ K+ RF + A + + ++ D+ P + + + + EE AN
Sbjct: 871 EAITTKFKEARFGNRATDIPALRLIYQLDDENIPVELNIFDSSPAHEVIEELSYKANFFV 930
Query: 735 AEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 794
A + A P+ A LRR PN R+L+ F ++ G ++D SSSG SL + +
Sbjct: 931 ARKLFAAMPEKAFLRRQAVPNPRRLQTFVDRMNRLGYEIDPSSSGSLQASLFKVK----- 985
Query: 795 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 854
D L + + MQ A Y+ +G+ + HYAL P+Y HFTSP RRY D++VHR
Sbjct: 986 DADLRKGMETVLIKAMQRAKYYVAGNVT-EAQRQHYALNLPLYAHFTSPTRRYADVIVHR 1044
Query: 855 TLNAAL 860
L A L
Sbjct: 1045 QLEAVL 1050
>gi|298374284|ref|ZP_06984242.1| ribonuclease R [Bacteroides sp. 3_1_19]
gi|298268652|gb|EFI10307.1| ribonuclease R [Bacteroides sp. 3_1_19]
Length = 728
Score = 243 bits (621), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 154/429 (35%), Positives = 223/429 (51%), Gaps = 45/429 (10%)
Query: 442 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWE 500
RI EW +E+ P V+ + G G+ +++AIL E + P S+ +P
Sbjct: 207 VRIVEWPDEAKNPLGEVIDILGIAGQNTAEMHAILAEFGLPYK--YPSSVEKAADKIPEA 264
Query: 501 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 560
+ EE+ +R+D R FTIDP A D DDALS RL +G VGVHIADV+++V
Sbjct: 265 ISPEEIENREDFRGITTFTIDPKDAKDFDDALSARRLDNGNWEVGVHIADVTHYVKTDGV 324
Query: 561 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIG 620
+D EAQ R+TSVY++ R IPMLP L ++ SL P ++L FS ++LNS V + I
Sbjct: 325 IDKEAQSRATSVYLVDRTIPMLPERLCNQICSLRPDEEKLCFSAVFELNSDAVVQNSRIC 384
Query: 621 RTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKI 680
RT+I+S + +YE AQ++I+ GEG D I +L +++K
Sbjct: 385 RTIIKSDRRFTYEEAQEVIE----------TGEG-----------DYKEEILALNDLAKK 423
Query: 681 LKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR 740
L+++RF GA+ + + F DE G P +D N L EEFMLLAN+T AE + R
Sbjct: 424 LRERRFKSGAINFDRYEVKFEIDEQGKPVRVYFKVSKDANKLIEEFMLLANRTVAEFVGR 483
Query: 741 ----AFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREK 791
+ + R H P+ K+ F +F + G +L T S + L+ + K
Sbjct: 484 PPKGKTKKTFVYRIHELPDPDKMENFASFIRRFGYKLKTDGTKTDVSKGINSLLDNVQGK 543
Query: 792 LKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 851
++ +++ A R MQ A Y + GHY LAF YTHFTSP+RRYPD++
Sbjct: 544 PEE-----NLIETVAIRAMQKARYSTE-------NIGHYGLAFEYYTHFTSPIRRYPDMM 591
Query: 852 VHRTLNAAL 860
VHR L L
Sbjct: 592 VHRLLERYL 600
>gi|424665659|ref|ZP_18102695.1| ribonuclease R [Bacteroides fragilis HMW 616]
gi|404573912|gb|EKA78663.1| ribonuclease R [Bacteroides fragilis HMW 616]
Length = 714
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 155/432 (35%), Positives = 223/432 (51%), Gaps = 45/432 (10%)
Query: 441 AARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPW 499
++ EW +++ P VL + G+ G+ +++AIL E + P+S+ +P
Sbjct: 192 VVKVTEWPDKAKNPIGQVLDILGKAGDNTTEMHAILAEFGLPY--VYPQSVEKAADKIPA 249
Query: 500 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 559
E+ EE+ R+D R FTIDP A D DDALSI L DG+ VGVHIADV+++V G+
Sbjct: 250 EISAEEIARREDFRKVTTFTIDPKDAKDFDDALSIRPLKDGLWEVGVHIADVTHYVKEGS 309
Query: 560 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 619
+D EA+ R+TSVY++ R IPMLP L + SL P ++LAFS +D+ G+V D I
Sbjct: 310 IIDKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPNEEKLAFSAIFDITEKGEVRDSRI 369
Query: 620 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 679
TVI S + +YE AQ II+ K EG D I L ++K
Sbjct: 370 VHTVIESDRRFTYEEAQQIIETK----------EG-----------DFKDEILMLDTIAK 408
Query: 680 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 739
L++KRF GA+ + + F DE G P +D N L EEFMLLAN+T AE I
Sbjct: 409 ALREKRFAAGAINFDRYEVKFEIDEKGKPISVYFKESKDANKLVEEFMLLANRTVAEKIG 468
Query: 740 RAFPDSAL----LRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQARE 790
+A R H P+ KL F ++ G +L TS S + L+ +
Sbjct: 469 KAPKGKKAKVLPYRIHDLPDPEKLDNLAQFIARFGYRLRTSGTKTDVSKSINHLLDDIQG 528
Query: 791 KLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDL 850
K ++ +++ + R MQ A Y + GHY LAF YTHFTSP+RR+PD+
Sbjct: 529 KKEE-----NLIETVSIRAMQKARYSTH-------NIGHYGLAFDFYTHFTSPIRRFPDM 576
Query: 851 VVHRTLNAALEA 862
+VHR + ++
Sbjct: 577 MVHRLVTKYMDG 588
>gi|365121736|ref|ZP_09338651.1| ribonuclease R [Tannerella sp. 6_1_58FAA_CT1]
gi|363645023|gb|EHL84303.1| ribonuclease R [Tannerella sp. 6_1_58FAA_CT1]
Length = 717
Score = 243 bits (620), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 155/436 (35%), Positives = 229/436 (52%), Gaps = 45/436 (10%)
Query: 430 EGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPE 489
+G T E LV+ I EW E + P V+ V G+ G + +++AIL E + + +
Sbjct: 184 KGGKTGEKALVS--ITEWPESAKNPYGEVIAVLGKAGNNDTEMHAILAEFGLPYT-YPKN 240
Query: 490 SLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIA 549
+ + +E+L R+D R FTIDP A D DDALSI +L +G VGVHIA
Sbjct: 241 VERAADKISDILTEEDLKDREDFRGITTFTIDPRDAKDFDDALSIRQLDNGNWEVGVHIA 300
Query: 550 DVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLN 609
DV+++V PG+ +D EA R+TSVY++ R IPMLP L ++ SL P D+L FS ++LN
Sbjct: 301 DVTHYVTPGSVIDKEAYKRATSVYLVDRTIPMLPERLCNQICSLRPDEDKLCFSAIFELN 360
Query: 610 SAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVR 669
+V I RTVIRS + +YE AQ+II+ G G D
Sbjct: 361 EKSEVQHSHITRTVIRSDRRFTYEEAQEIIES----------GRG-----------DYSS 399
Query: 670 SIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLL 729
I L ++++ L+++RF++G++ + + F DE G P ++ N L EEFMLL
Sbjct: 400 EILKLNDLAQKLRERRFSEGSINFDRHEVKFEIDENGRPLSVYFKVSKEANKLVEEFMLL 459
Query: 730 ANKTAAEVI--------ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDT-SSSGQ 780
AN+T AE + A+AF + R H P+ K+ F + G L T + GQ
Sbjct: 460 ANRTVAESVGKVDGNRTAKAF----VYRVHDLPDPEKMNTMATFIRRFGYTLRTEGTKGQ 515
Query: 781 FHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHF 840
+S+ + +++ +++ A R M A+Y + GHY LAF YTHF
Sbjct: 516 ISRSINSLLDNIQNK-PEENLIETVAIRTMAKATYSTK-------NIGHYGLAFDYYTHF 567
Query: 841 TSPLRRYPDLVVHRTL 856
TSP+RRYPD++VHR L
Sbjct: 568 TSPIRRYPDMMVHRLL 583
>gi|423281396|ref|ZP_17260307.1| ribonuclease R [Bacteroides fragilis HMW 610]
gi|404583100|gb|EKA87783.1| ribonuclease R [Bacteroides fragilis HMW 610]
Length = 714
Score = 243 bits (620), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 155/432 (35%), Positives = 223/432 (51%), Gaps = 45/432 (10%)
Query: 441 AARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPW 499
++ EW +++ P VL + G+ G+ +++AIL E + P+S+ +P
Sbjct: 192 VVKVTEWPDKAKNPIGQVLDILGKAGDNTTEMHAILAEFGLPY--VYPQSVEKAADKIPA 249
Query: 500 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 559
E+ EE+ R+D R FTIDP A D DDALSI L DG+ VGVHIADV+++V G+
Sbjct: 250 EISAEEIARREDFRKVTTFTIDPKDAKDFDDALSIRPLKDGLWEVGVHIADVTHYVKEGS 309
Query: 560 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 619
+D EA+ R+TSVY++ R IPMLP L + SL P ++LAFS +D+ G+V D I
Sbjct: 310 IIDKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPNEEKLAFSAIFDITEKGEVRDSRI 369
Query: 620 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 679
TVI S + +YE AQ II+ K EG D I L ++K
Sbjct: 370 VHTVIESDRRFTYEEAQQIIETK----------EG-----------DFKDEILMLDTIAK 408
Query: 680 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 739
L++KRF GA+ + + F DE G P +D N L EEFMLLAN+T AE I
Sbjct: 409 ALREKRFAAGAINFDRYEVKFEIDEKGKPISVYFKESKDANKLVEEFMLLANRTVAEKIG 468
Query: 740 RAFPDSAL----LRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQARE 790
+A R H P+ KL F ++ G +L TS S + L+ +
Sbjct: 469 KAPKGKKAKVLPYRIHDLPDPEKLDNLAQFIARFGYRLRTSGTKTDVSKSINHLLDDIQG 528
Query: 791 KLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDL 850
K ++ +++ + R MQ A Y + GHY LAF YTHFTSP+RR+PD+
Sbjct: 529 KKEE-----NLIETVSIRAMQKARYSTH-------NIGHYGLAFDYYTHFTSPIRRFPDM 576
Query: 851 VVHRTLNAALEA 862
+VHR + ++
Sbjct: 577 MVHRLVTKYMDG 588
>gi|378729436|gb|EHY55895.1| hypothetical protein HMPREF1120_04009 [Exophiala dermatitidis
NIH/UT8656]
Length = 1363
Score = 243 bits (620), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 191/718 (26%), Positives = 319/718 (44%), Gaps = 72/718 (10%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R +F P+ + L G + RVN NR +AY + D+ I G +NRA
Sbjct: 420 RKTLFTPYLPQATLPALLNDGQLVAGILRVNKKNRSDAYVTTSDLDADIFICGSKDRNRA 479
Query: 216 VEGDFVLIK-VDRLSLWAKMKGFSNNSSI--VEDSNLPTEANGMHSDICKGKSKVDVSYE 272
+EGD V ++ +D +W++ + + D+ NG + +
Sbjct: 480 LEGDLVAVELLDVDEVWSQKREKEEKKKRKDITDTRSGNNQNGKNDASSNDTQSIAPDGS 539
Query: 273 YSNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMN 332
L ++ +D +E EG + + SD + + + +
Sbjct: 540 IRRRGSLRQRPTQKKNDD---------VEVEGQSLLLMEEEEISDEQKPLYAGHV---VA 587
Query: 333 AIERLSAMISSYPTK--RPTGRVVSIIERSPR--RDGIVGFLNVNQWFNYKGGSRKDAKK 388
IER++ + S RP+ + + + R RDG G SR ++++
Sbjct: 588 VIERVAGQMFSGTLGLLRPSSQATKEKQEAERNARDG--------------GHSRSESRQ 633
Query: 389 NRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLP-DSIKKRLEEGDATIEMELVAARIDEW 447
+ + PT + P + + + P D + K ++ + + A I W
Sbjct: 634 QDKP------KIVWFKPTDKRVPLIAIPTEQAPRDFVDKHMDYAN-----RIFVACIKRW 682
Query: 448 NEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEE-- 505
S P ++ G G++ + +A+L +N FS L + W + E
Sbjct: 683 PITSLHPFGTLVEQLGEMGDLRVETDALLRDNNFGSDEFSDAVLKSVGWDDWSLASESED 742
Query: 506 -LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIE 564
L +R+DLR+ FTIDP+ +DLDDA+ + + DG+ VG+H+ D+++FV + +D E
Sbjct: 743 FLAARRDLRDERTFTIDPNGTSDLDDAIHFKSVEDGLVEVGIHVTDIAHFVKANSLVDRE 802
Query: 565 AQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR--WIGRT 622
A+ R T VY++ R + MLP LS V SL PG RL S+ + +N V+ WIG+T
Sbjct: 803 AKKRGTGVYLVNRAVNMLPPKLSSGVCSLIPGEGRLTVSVIFKVNPETGKVEGEPWIGKT 862
Query: 623 VIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILK 682
+I+S KL+Y +I G+G L+G V IK+L+ ++ +
Sbjct: 863 IIQSSGKLAYRDVDAVIK-----------GDGNAGLHGA-----TVDDIKTLHTIANKFR 906
Query: 683 DKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAF 742
+ RF + + + ++ D+ P + + + + EE AN A+ I A
Sbjct: 907 EARFGHRSANISPLRLLYQLDDENVPVEQNIFNTSAAHEIVEEICCKANFFVAQKILAAL 966
Query: 743 PDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDIL 802
PD ALLRR PN R+L F ++ G ++DT+SSG SL + +D L +
Sbjct: 967 PDKALLRRQAPPNPRRLLTFADRMTRAGYEIDTTSSGTLQNSLFKV-----EDPDLRKGM 1021
Query: 803 INYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
+ +Q A Y+ + ++ HYAL P+YTHFT+P RRY D+VVHR L AAL
Sbjct: 1022 ETLLIKTLQRAKYYIADQVSEEQRQ-HYALNLPIYTHFTNPSRRYADIVVHRQLEAAL 1078
>gi|256838702|ref|ZP_05544212.1| ribonuclease R [Parabacteroides sp. D13]
gi|256739621|gb|EEU52945.1| ribonuclease R [Parabacteroides sp. D13]
Length = 727
Score = 243 bits (620), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 154/429 (35%), Positives = 223/429 (51%), Gaps = 45/429 (10%)
Query: 442 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWE 500
RI EW +E+ P V+ + G G+ +++AIL E + P S+ +P
Sbjct: 206 VRIVEWPDEAKNPLGEVIDILGIAGQNTAEMHAILAEFGLPYK--YPSSVEKAADKIPEA 263
Query: 501 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 560
+ EE+ +R+D R FTIDP A D DDALS RL +G VGVHIADV+++V
Sbjct: 264 ISPEEIENREDFRGITTFTIDPKDAKDFDDALSARRLDNGNWEVGVHIADVTHYVKTDGV 323
Query: 561 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIG 620
+D EAQ R+TSVY++ R IPMLP L ++ SL P ++L FS ++LNS V + I
Sbjct: 324 IDKEAQSRATSVYLVDRTIPMLPERLCNQICSLRPDEEKLCFSAVFELNSDAVVQNSRIC 383
Query: 621 RTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKI 680
RT+I+S + +YE AQ++I+ GEG D I +L +++K
Sbjct: 384 RTIIKSDRRFTYEEAQEVIE----------TGEG-----------DYKEEILALNDLAKK 422
Query: 681 LKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR 740
L+++RF GA+ + + F DE G P +D N L EEFMLLAN+T AE + R
Sbjct: 423 LRERRFKSGAINFDRYEVKFEIDEQGKPVRVYFKISKDANKLIEEFMLLANRTVAEFVGR 482
Query: 741 ----AFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREK 791
+ + R H P+ K+ F +F + G +L T S + L+ + K
Sbjct: 483 PPKGKTKKTFVYRIHELPDPDKMENFASFIRRFGYKLKTDGTKTDVSKGINSLLDNVQGK 542
Query: 792 LKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 851
++ +++ A R MQ A Y + GHY LAF YTHFTSP+RRYPD++
Sbjct: 543 PEE-----NLIETVAIRAMQKARYSTE-------NIGHYGLAFEYYTHFTSPIRRYPDMM 590
Query: 852 VHRTLNAAL 860
VHR L L
Sbjct: 591 VHRLLERYL 599
>gi|126644165|ref|XP_001388218.1| mitotic control protein dis3 [Cryptosporidium parvum Iowa II]
gi|126117291|gb|EAZ51391.1| mitotic control protein dis3, putative [Cryptosporidium parvum Iowa
II]
Length = 922
Score = 243 bits (620), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 157/468 (33%), Positives = 243/468 (51%), Gaps = 56/468 (11%)
Query: 433 ATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLS 492
+TIE + + IDEW+ S +P H++ V G+ G++E + + IL I S FSP L
Sbjct: 464 STIENQRLVVVIDEWDCSSFYPTGHIVGVLGKAGDLETETSVILRIRDINSSEFSPSVLK 523
Query: 493 CLPCVP----WEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLS--DGISR--- 543
CLP W+ + + R DLRN +F++DP D+DDALSIE ++ D S+
Sbjct: 524 CLPNNDRNDDWKPNEIDFRDRVDLRNKLVFSVDPPGCKDIDDALSIELINPNDDNSQEKW 583
Query: 544 --VGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLA 601
V VHIADV++FV P T +D EA RS + Y++ ++I MLP L+ + SL DRL+
Sbjct: 584 YLVSVHIADVTHFVKPNTPIDDEASRRSNTCYLVNKRIDMLPEELTTNICSLVSNKDRLS 643
Query: 602 FSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQ 661
F+ W++N ++ + + +T+I S +Y AQ+IID K +
Sbjct: 644 FTCNWEINENAEIRNVYFNKTIINSKYSFTYLQAQNIIDDKCN----------------- 686
Query: 662 FEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLS---GRED 718
S++ S++ L ++S++L+ R + GA+ L +S+ F+E Y + G+E
Sbjct: 687 --NSEIAISLRRLMKISQVLRKNRISRGAIELSSSEVKVDFEESRNLYQDLNHNDLGKEQ 744
Query: 719 L------------------NFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLR 760
+ N + EEFMLLAN + A I FP+ LLRRHP P +L
Sbjct: 745 ISSVILNIKNVYAYNYLNTNSMVEEFMLLANVSVARQIISKFPNCCLLRRHPEPKYDQLE 804
Query: 761 EFEAFCSKHGL-QLDTSSSGQFHQSLEQA--REKLKDDYVLFDILINYATRPMQLASYFC 817
+ + SK G+ +S SL+ E +K + ++ ++ TR M A YF
Sbjct: 805 KLKYVLSKVGISNFTYENSLSLSNSLKNILDSEIIKKNPIIGKLVRILTTRTMNQALYFT 864
Query: 818 SGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 865
+ + T HY LA +YTHFTSP+RRY D++VHR L+A++ E L
Sbjct: 865 TCKSVEGT--FHYGLAEEIYTHFTSPIRRYADIIVHRLLSASIGLEPL 910
Score = 43.1 bits (100), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 148 NPSHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLIT 207
N + Q E C IF + S + + +++G FK + R+ + NR E + + V I
Sbjct: 250 NDNSQPENNC-IFTEYASEREILQGIDRGVLFKGILRMISRNRGEIEVTNKNRKMTVNII 308
Query: 208 GIAAQNRAVEGDFVLIKVD 226
G NR+++GD V++K+D
Sbjct: 309 GHLNLNRSIDGDLVVVKLD 327
>gi|423333672|ref|ZP_17311453.1| ribonuclease R [Parabacteroides distasonis CL03T12C09]
gi|409226982|gb|EKN19884.1| ribonuclease R [Parabacteroides distasonis CL03T12C09]
Length = 727
Score = 243 bits (620), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 154/429 (35%), Positives = 223/429 (51%), Gaps = 45/429 (10%)
Query: 442 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWE 500
RI EW +E+ P V+ + G G+ +++AIL E + P S+ +P
Sbjct: 206 VRIVEWPDEAKNPLGEVIDILGIAGQNTAEMHAILAEFGLPYK--YPSSVEKAADKIPEA 263
Query: 501 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 560
+ EE+ +R+D R FTIDP A D DDALS RL +G VGVHIADV+++V
Sbjct: 264 ISPEEIENREDFRGITTFTIDPKDAKDFDDALSARRLDNGNWEVGVHIADVTHYVKTDGV 323
Query: 561 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIG 620
+D EAQ R+TSVY++ R IPMLP L ++ SL P ++L FS ++LNS V + I
Sbjct: 324 IDKEAQSRATSVYLVDRTIPMLPERLCNQICSLRPDEEKLCFSAVFELNSDAVVQNSRIC 383
Query: 621 RTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKI 680
RT+I+S + +YE AQ++I+ GEG D I +L +++K
Sbjct: 384 RTIIKSDRRFTYEEAQEVIE----------TGEG-----------DYKEEILALNDLAKK 422
Query: 681 LKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR 740
L+++RF GA+ + + F DE G P +D N L EEFMLLAN+T AE + R
Sbjct: 423 LRERRFKSGAINFDRYEVKFEIDEQGKPVRVYFKISKDANKLIEEFMLLANRTVAEFVGR 482
Query: 741 ----AFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREK 791
+ + R H P+ K+ F +F + G +L T S + L+ + K
Sbjct: 483 PPKGKTKKTFVYRIHELPDPDKMENFASFIRRFGYKLKTDGTKTDVSKGINSLLDNVQGK 542
Query: 792 LKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 851
++ +++ A R MQ A Y + GHY LAF YTHFTSP+RRYPD++
Sbjct: 543 PEE-----NLIETVAIRAMQKARYSTE-------NIGHYGLAFEYYTHFTSPIRRYPDMM 590
Query: 852 VHRTLNAAL 860
VHR L L
Sbjct: 591 VHRLLERYL 599
>gi|298207271|ref|YP_003715450.1| exoribonuclease [Croceibacter atlanticus HTCC2559]
gi|83849907|gb|EAP87775.1| putative exoribonuclease [Croceibacter atlanticus HTCC2559]
Length = 735
Score = 243 bits (619), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 150/431 (34%), Positives = 222/431 (51%), Gaps = 22/431 (5%)
Query: 439 LVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVP 498
+V +++W E++ P V+ V G GE E +I+AIL + + F E +
Sbjct: 189 MVVVELEDWPEKADSPFGRVIEVLGVPGEHETEIHAILAQYGLPHE-FPKEVEEFANKID 247
Query: 499 WEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPG 558
+ + E+ R+D+R+ FTIDP A D DDALS + L +G VG+HIADVS+++ PG
Sbjct: 248 TSIQESEIKKRRDMRDTLTFTIDPKDAKDFDDALSFKILENGHYEVGIHIADVSHYLKPG 307
Query: 559 TALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW 618
T LD EA R+TSVY++ R +PMLP +LS SL P ++ FS ++++ + ++W
Sbjct: 308 TILDDEAYERATSVYLVDRVVPMLPEVLSNNACSLRPNEEKYTFSAVFEIDENSKIHNQW 367
Query: 619 IGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSD--VVRSIKSLYE 676
G+TV S + +YE AQ II ES +T L G+ +D + +I + +
Sbjct: 368 FGKTVTYSDARFAYEEAQAII------ESKSTSIPADVSLTGKAYKTDDAIADAILKMDK 421
Query: 677 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 736
V+KI++ KR GA+ + + F +E P +D N L EE+MLLANK AE
Sbjct: 422 VAKIMRRKRMGQGAISFDKVEVKFELNEANEPVGVFFKTSKDANKLIEEYMLLANKKVAE 481
Query: 737 VIARAFPDSALLRR-HPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLK-- 793
I + P + R H PN KL + + G L+ S QSL + + +
Sbjct: 482 FIGKQDPKKTFVYRCHDEPNSDKLSALQNLVGRFGYTLNFKSRKTTTQSLNKLLQDVNGT 541
Query: 794 DDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVH 853
+ L D L R M A Y + GHY LAF Y+HFTSP+RRYPD++ H
Sbjct: 542 KEQNLIDTL---TIRTMSKAYYSTE-------NIGHYGLAFDYYSHFTSPIRRYPDVMAH 591
Query: 854 RTLNAALEAEK 864
R L L+ K
Sbjct: 592 RLLQYYLDKGK 602
>gi|160891706|ref|ZP_02072709.1| hypothetical protein BACUNI_04161 [Bacteroides uniformis ATCC 8492]
gi|270295199|ref|ZP_06201400.1| ribonuclease R [Bacteroides sp. D20]
gi|317478234|ref|ZP_07937400.1| ribonuclease R [Bacteroides sp. 4_1_36]
gi|156859113|gb|EDO52544.1| ribonuclease R [Bacteroides uniformis ATCC 8492]
gi|270274446|gb|EFA20307.1| ribonuclease R [Bacteroides sp. D20]
gi|316905627|gb|EFV27415.1| ribonuclease R [Bacteroides sp. 4_1_36]
Length = 714
Score = 243 bits (619), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 150/429 (34%), Positives = 225/429 (52%), Gaps = 43/429 (10%)
Query: 442 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEV 501
++ EW +++ P V+ + GR G+ +++AIL E + + +P E+
Sbjct: 193 VKVVEWPDKAKNPIGQVIDILGRAGDNTTEMHAILAEFGLPYV-YPAAVEKAADKIPAEI 251
Query: 502 PQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTAL 561
EE+ R+D R FTIDP A D DDALSI +L G+ VGVHIADV+++V G +
Sbjct: 252 SAEEIARREDFRGVTTFTIDPKDAKDFDDALSIRKLKGGLWEVGVHIADVTHYVKEGGII 311
Query: 562 DIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGR 621
D EA+ R+TSVY++ R IPMLP L + SL P ++LA+S+ +++ G+V + +
Sbjct: 312 DKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPDEEKLAYSVIFEMTEKGEVKNSRVVH 371
Query: 622 TVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKIL 681
TVI+S + +YE AQ+II+ G+G D + L +++KIL
Sbjct: 372 TVIKSDRRFTYEEAQEIIE----------TGKG-----------DFQEEVLQLDKLAKIL 410
Query: 682 KDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARA 741
++ RF GA+ + + F DE G P +D N L EEFMLLAN+T AE I R
Sbjct: 411 RENRFKAGAINFDRYEVKFEIDEKGKPVSVYFKESKDANKLIEEFMLLANRTVAEKIGRV 470
Query: 742 --FPDSALL--RRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREKL 792
+ +L R H P+ KL F ++ G +L TS S + L+ + K
Sbjct: 471 PKGKKAKVLPYRIHDLPDPEKLDNLAQFIARFGYKLRTSGTKTDISKSINHLLDDIQGKK 530
Query: 793 KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 852
++ +++ + R MQ A Y + GHY LAF YTHFTSP+RRYPD++V
Sbjct: 531 EE-----NLIETVSIRAMQKARYSVH-------NVGHYGLAFDYYTHFTSPIRRYPDMMV 578
Query: 853 HRTLNAALE 861
HR L L+
Sbjct: 579 HRLLTKYLD 587
>gi|327350656|gb|EGE79513.1| exosome complex exonuclease exoribonuclease [Ajellomyces
dermatitidis ATCC 18188]
Length = 1039
Score = 242 bits (618), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 188/561 (33%), Positives = 274/561 (48%), Gaps = 68/561 (12%)
Query: 317 DSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWF 376
D E V + ++ + R + ++ +PT RVV I++R+ W
Sbjct: 351 DEKEAVVTEKERRALQEEVRKAHGTTAEGRPQPTARVVGIVKRN--------------WR 396
Query: 377 NYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIE 436
Y G K + + S ++ + + P + PK+ + + + +R+
Sbjct: 397 QYVGNIDKISSGTQEQ-SGRRQQTVFVIPMDKRIPKIRIRTRQARELFGQRI-------- 447
Query: 437 MELVAARIDEWNEESPFPQAHVLHVFG----RGGEVEPQINAILYENAICCSGFSPESLS 492
L+ +D W+ +S +P H + G +G E E A+L E + F L
Sbjct: 448 --LIT--VDAWDRDSRYPTGHFVRSLGELETKGAETE----ALLLEYDVQYRPFPQMVLD 499
Query: 493 CLPCVP--WEVPQE----ELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGV 546
CLP W+VPQ RKDLR+ + +IDP D+DDAL L +G VGV
Sbjct: 500 CLPPEGHNWKVPQNMDDPGWRDRKDLRDLLVCSIDPPGCQDIDDALHARPLPNGNFEVGV 559
Query: 547 HIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFW 606
HIADVS+FV P T +D EA +R T+VY++ ++I MLP+LL ++ SL P V R AFS W
Sbjct: 560 HIADVSHFVKPNTPMDTEASMRGTTVYLVDKRIDMLPMLLGTDLCSLKPHVQRYAFSNIW 619
Query: 607 DLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSD 666
++ + +VV ++VI S SYE AQ ID K + +
Sbjct: 620 EMTPSAEVVSSTCTKSVILSREAFSYEQAQLRIDDKSKTD-------------------E 660
Query: 667 VVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLS-GREDLNFLFE 724
+ S+++L +++K+LK KR GAL L + + D E P V + D N L E
Sbjct: 661 LTESMRTLLKLAKLLKQKRMDAGALNLASPEVRIETDSELSDPMTDVKTKALLDTNSLVE 720
Query: 725 EFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCS-KHGLQLDTSSSGQFHQ 783
EFML AN T A I ++FP +ALLRRH P E A S K + LD SSS
Sbjct: 721 EFMLHANTTVAAKIFKSFPQTALLRRHATPPPSNFEELIAQLSKKRNMTLDVSSSLALAT 780
Query: 784 SLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTS 842
SL++ + F+ L+ ATR M A YFC+G ++++ HY LA +YTHFTS
Sbjct: 781 SLDRCVDPANP---FFNTLVRILATRCMTSAEYFCAGAHA-ESEFRHYGLASTIYTHFTS 836
Query: 843 PLRRYPDLVVHRTLNAALEAE 863
P+RRY DLVVHR L AA+ E
Sbjct: 837 PIRRYADLVVHRQLAAAIGYE 857
Score = 42.7 bits (99), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 156 RCKIFAP-HWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNR 214
R ++F P ++SM + L G + ++ V+ +N LE ++ +LI G NR
Sbjct: 253 RGELFYPEYYSMSKLMTGLRAGTLHQGVFNVSPYNYLEGSVQVAAFDKSLLILGRDNSNR 312
Query: 215 AVEGDFVLIKVDRLSLW 231
A+ GD V+++V W
Sbjct: 313 AIAGDIVVVEVLPRDQW 329
>gi|410096552|ref|ZP_11291539.1| ribonuclease R [Parabacteroides goldsteinii CL02T12C30]
gi|409226516|gb|EKN19425.1| ribonuclease R [Parabacteroides goldsteinii CL02T12C30]
Length = 726
Score = 242 bits (618), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 155/432 (35%), Positives = 234/432 (54%), Gaps = 46/432 (10%)
Query: 442 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWE 500
RI EW +E+ P V+ + G G+ +++AIL E + + PE++ +
Sbjct: 204 VRIVEWPDEAKNPLGEVVDILGVAGQNTAEMHAILAEFGLPYT--YPENVEKAANKISEI 261
Query: 501 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 560
+P+EE+ R+D R FTIDP A D DDALS+ +L +G VGVHIADV+++V P +
Sbjct: 262 IPEEEIAKREDFRKVLTFTIDPKDAKDFDDALSVRQLDNGNWEVGVHIADVTHYVKPESL 321
Query: 561 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIG 620
+D EA+ R+TSVY++ R IPMLP L ++ SL P ++L FS ++L+ +V IG
Sbjct: 322 IDREAESRATSVYLVDRTIPMLPERLCNQICSLRPDEEKLCFSAIFELDEEANVKKSRIG 381
Query: 621 RTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKI 680
RTVI+S + +YE AQ +I+ GEG ++ D + + +L +K
Sbjct: 382 RTVIKSDRRFTYEEAQLVIE----------TGEG--------DYKDEILVLDAL---AKK 420
Query: 681 LKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR 740
L++KRF +GA+ + + F DE G P + + +D N L EEFMLLAN+T AE + +
Sbjct: 421 LREKRFKNGAVNFDRFEVRFEIDETGKPISTYIKESKDANKLIEEFMLLANRTVAEFVGK 480
Query: 741 A----FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQS------LEQARE 790
+ + R H P+ KL F AF + G ++ T S + S L++ +
Sbjct: 481 VPKGKTKKTFVYRIHDLPDPDKLENFAAFIRRFGYKMKTEGSSKIDISRNLNRLLDEVHD 540
Query: 791 KLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDL 850
K ++ +++ A R MQ A Y + GHY LAF YTHFTSP+RRYPD+
Sbjct: 541 KPEE-----NLIETLAIRSMQKARYTTE-------NIGHYGLAFEYYTHFTSPIRRYPDM 588
Query: 851 VVHRTLNAALEA 862
+VHR L LE
Sbjct: 589 MVHRLLERYLEG 600
>gi|29348486|ref|NP_811989.1| ribonuclease R [Bacteroides thetaiotaomicron VPI-5482]
gi|298385815|ref|ZP_06995372.1| ribonuclease R [Bacteroides sp. 1_1_14]
gi|29340390|gb|AAO78183.1| ribonuclease R [Bacteroides thetaiotaomicron VPI-5482]
gi|298261043|gb|EFI03910.1| ribonuclease R [Bacteroides sp. 1_1_14]
Length = 718
Score = 242 bits (618), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 148/431 (34%), Positives = 220/431 (51%), Gaps = 45/431 (10%)
Query: 442 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWE 500
++ EW +++ P V+ + G G+ +++AIL E + P+++ + +P E
Sbjct: 196 VKVTEWPDKAKNPIGQVIDILGVAGDNTTEMHAILAEFGLPY--VYPKAVETAADKIPAE 253
Query: 501 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 560
+ EE+ R+D R FTIDP A D DDALSI + DG+ VGVHIADV+++V G
Sbjct: 254 ITPEEIARREDFRKVTTFTIDPKDAKDFDDALSIRPIKDGLWEVGVHIADVTHYVKEGGI 313
Query: 561 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIG 620
+D EA+ R+TSVY++ R IPMLP L + SL P ++LAFS+ +D+ G+V D I
Sbjct: 314 IDKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPNEEKLAFSVIFDITEKGEVRDSRIV 373
Query: 621 RTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKI 680
TVI S + +YE AQ II+ K D + L ++K
Sbjct: 374 HTVINSDRRFTYEEAQQIIETK---------------------TGDFKEEVLMLDTIAKA 412
Query: 681 LKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR 740
L++KRF GA+ + + F DE G P +D N L EEFMLLAN+T AE + R
Sbjct: 413 LREKRFAAGAINFDRYEVKFEIDEKGKPISVYFKESKDANKLVEEFMLLANRTVAEKVGR 472
Query: 741 A----FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREK 791
P R H P+ KL F ++ G ++ TS S + L+ K
Sbjct: 473 VPKNKKPKVLPYRIHDLPDPEKLENLSQFIARFGYKVRTSGTKTDISKSINHLLDDIHGK 532
Query: 792 LKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 851
++ +++ + R MQ A Y + GHY LAF YTHFTSP+RR+PD++
Sbjct: 533 KEE-----NLIETVSIRAMQKARYSTH-------NIGHYGLAFDYYTHFTSPIRRFPDMM 580
Query: 852 VHRTLNAALEA 862
VHR + ++
Sbjct: 581 VHRLVTKYMDG 591
>gi|423304593|ref|ZP_17282592.1| ribonuclease R [Bacteroides uniformis CL03T00C23]
gi|423310293|ref|ZP_17288277.1| ribonuclease R [Bacteroides uniformis CL03T12C37]
gi|392682489|gb|EIY75834.1| ribonuclease R [Bacteroides uniformis CL03T12C37]
gi|392684043|gb|EIY77375.1| ribonuclease R [Bacteroides uniformis CL03T00C23]
Length = 714
Score = 242 bits (617), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 150/429 (34%), Positives = 225/429 (52%), Gaps = 43/429 (10%)
Query: 442 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEV 501
++ EW +++ P V+ + GR G+ +++AIL E + + +P E+
Sbjct: 193 VKVVEWPDKAKNPIGQVIDILGRAGDNTTEMHAILAEFGLPYV-YPAAVEKAADKIPAEI 251
Query: 502 PQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTAL 561
EE+ R+D R FTIDP A D DDALSI +L G+ VGVHIADV+++V G +
Sbjct: 252 SAEEIARREDFRGVTTFTIDPKDAKDFDDALSIRKLKGGLWEVGVHIADVTHYVKEGGII 311
Query: 562 DIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGR 621
D EA+ R+TSVY++ R IPMLP L + SL P ++LA+S+ +++ G+V + +
Sbjct: 312 DKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPDEEKLAYSVIFEMTEKGEVKNSRVVH 371
Query: 622 TVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKIL 681
TVI+S + +YE AQ+II+ G+G D + L +++KIL
Sbjct: 372 TVIKSDRRFTYEEAQEIIE----------TGKG-----------DFQEEMLQLDKLAKIL 410
Query: 682 KDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARA 741
++ RF GA+ + + F DE G P +D N L EEFMLLAN+T AE I R
Sbjct: 411 RENRFKAGAINFDRYEVKFEIDEKGKPVSVYFKESKDANKLIEEFMLLANRTVAEKIGRV 470
Query: 742 --FPDSALL--RRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREKL 792
+ +L R H P+ KL F ++ G +L TS S + L+ + K
Sbjct: 471 PKGKKAKVLPYRIHDLPDPEKLDNLAQFIARFGYKLRTSGTKTDISKSINHLLDDIQGKK 530
Query: 793 KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 852
++ +++ + R MQ A Y + GHY LAF YTHFTSP+RRYPD++V
Sbjct: 531 EE-----NLIETVSIRAMQKARYSVH-------NVGHYGLAFDYYTHFTSPIRRYPDMMV 578
Query: 853 HRTLNAALE 861
HR L L+
Sbjct: 579 HRLLTKYLD 587
>gi|115491581|ref|XP_001210418.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114197278|gb|EAU38978.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1242
Score = 242 bits (617), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 201/720 (27%), Positives = 314/720 (43%), Gaps = 70/720 (9%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R +F P+ + L G + RVN NR +AY + D+ I G +NRA
Sbjct: 290 RKTLFTPYLPQANLPALLSNGQLVAGILRVNKKNRSDAYVTTPDLDADIFICGSKDRNRA 349
Query: 216 VEGDFVLIKV-DRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYS 274
+EGD+V +++ D +W++ K DI +S E
Sbjct: 350 LEGDYVAVELLDVDEVWSQKKEKEEKKKR--------------KDITDARSGSTAGTEKL 395
Query: 275 NCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAI 334
SE G + D E I R G T+K + + +G + +
Sbjct: 396 G---RSESGSNGD---RQEVGPDGSIRRRGS--------LRQRPTQKKNDDVEVEGQSLL 441
Query: 335 ERLSAMISSYPTKRPTGRVVSIIERSPRR--DGIVGFLN-VNQWFNYKGGSRKDAKKNRS 391
IS G +V++IER + G +G L +Q K + + A+
Sbjct: 442 LVEEDEISDEQKPLYAGHIVAVIERIAGQMFSGTLGLLRPSSQATKEKQEAERLARDGAH 501
Query: 392 SLSVPDR-----EYIQLTPTHPKYPKMVVLVKDLP-DSIKKRLEEGDATIEMELVAARID 445
S DR + + PT + P + + + P D ++K + + + A I
Sbjct: 502 GRSQQDRHQEKPKIVWFKPTDKRVPLIAIPTEQAPRDFVEKHQDYAN-----RIFVACIK 556
Query: 446 EWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEE 505
W S P ++ G G+++ + +A+L +N FS L + W V +
Sbjct: 557 RWPITSLHPFGTLVEQLGEMGDLKVETDALLRDNNFGSDEFSEAVLKSIGFEDWSVASQG 616
Query: 506 ---LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALD 562
L +R+D R FTI PS + +LD+A + L DG +G+H+ D+++FV + +D
Sbjct: 617 EALLATRRDFRQETTFTISPSGSKELDNAYHFKTLPDGKVEIGIHVTDIAHFVKANSLVD 676
Query: 563 IEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR--WIG 620
EA+ R T+VY+ R + MLP +S E+ +L P DRL S+ + N VD WIG
Sbjct: 677 REAKKRGTAVYLTDRLVNMLPPRVSTELCALLPDEDRLTVSVVFKANPETGAVDDDVWIG 736
Query: 621 RTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKI 680
++VI+S +LSY+ +I G +V + +I+SL V+
Sbjct: 737 KSVIKSSGRLSYDEVDAVIQGGSNVAVPGITAD----------------TIRSLATVTSK 780
Query: 681 LKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR 740
++ RF + A L + ++ D+ P + + + L EE AN A I
Sbjct: 781 FREARFGNRASNLPPLRLLYQMDDENVPVEDNIFNAAPVRELVEELSHKANFFVARKIVA 840
Query: 741 AFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFD 800
A PD A LRR P+PN R+L F ++ G LD +SSG SL Q ++ DD L
Sbjct: 841 ALPDKAFLRRQPSPNPRRLNAFIDRMNRLGFGLDATSSGTLQSSLCQVQD---DD--LRK 895
Query: 801 ILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
+ + MQ A YF +G +D HY L PVYTHFT+P RRY D++VHR L AL
Sbjct: 896 GMETLLVKAMQRAKYFVAGSVPEDQRQ-HYTLNLPVYTHFTNPSRRYTDIIVHRQLECAL 954
>gi|67598415|ref|XP_666217.1| mitotic control protein dis3 [Cryptosporidium hominis TU502]
gi|54657170|gb|EAL35988.1| mitotic control protein dis3 [Cryptosporidium hominis]
Length = 637
Score = 242 bits (617), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 156/468 (33%), Positives = 242/468 (51%), Gaps = 56/468 (11%)
Query: 433 ATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLS 492
+TIE + + IDEW+ S +P H++ V G+ G++E + + IL I S FSP L
Sbjct: 179 STIENQRLVVVIDEWDCSSFYPTGHIVGVLGKAGDLETETSVILRIRDINSSEFSPSVLK 238
Query: 493 CLPCVP----WEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLS--DGISR--- 543
CLP W+ + + R DLR +F++DP D+DDALSIE ++ D S+
Sbjct: 239 CLPNHDRNDDWKPNEIDFRDRVDLRKKLVFSVDPPGCKDIDDALSIELINPNDDNSQENW 298
Query: 544 --VGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLA 601
V VHIADV++FV P T +D EA RS + Y++ ++I MLP L+ + SL DRL+
Sbjct: 299 YLVSVHIADVTHFVKPNTPIDDEASRRSNTCYLVNKRIDMLPEELTTNICSLVSNKDRLS 358
Query: 602 FSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQ 661
F+ W++N ++ + + +T+I S +Y AQ+IID K +
Sbjct: 359 FTCNWEINENAEIRNVYFNKTIINSKYSFTYLQAQNIIDDKCN----------------- 401
Query: 662 FEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLS---GRED 718
S++ S++ L ++S++L+ R + GA+ L +S+ F+E Y + G+E
Sbjct: 402 --NSEIAISLRRLMKISQVLRKNRISRGAIELSSSEVKVDFEESRNLYQDLNHNDLGKEQ 459
Query: 719 L------------------NFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLR 760
+ N + EEFMLLAN + A I FP+ LLRRHP P +L
Sbjct: 460 ISSVILNIKNVYAYNYLNTNSMVEEFMLLANVSVARQIVSKFPNCCLLRRHPEPKYDQLE 519
Query: 761 EFEAFCSKHGL-QLDTSSSGQFHQSLEQA--REKLKDDYVLFDILINYATRPMQLASYFC 817
+ + SK G+ +S SL+ E +K + ++ ++ TR M A YF
Sbjct: 520 KLKHVLSKVGISNFTYENSLSLSNSLKNILDSEIIKKNPIIGKLVRILTTRTMNQALYFT 579
Query: 818 SGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 865
+ + T HY LA +YTHFTSP+RRY D++VHR L+A++ E L
Sbjct: 580 TCKSVEGT--FHYGLAEEIYTHFTSPIRRYADIIVHRLLSASIGLEPL 625
>gi|327403544|ref|YP_004344382.1| ribonuclease R [Fluviicola taffensis DSM 16823]
gi|327319052|gb|AEA43544.1| ribonuclease R [Fluviicola taffensis DSM 16823]
Length = 718
Score = 242 bits (617), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 170/502 (33%), Positives = 245/502 (48%), Gaps = 51/502 (10%)
Query: 372 VNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRL--- 428
V N KGGSR + + + V RE Q T + K L+ PD+ K +
Sbjct: 126 VRVALNKKGGSRPEGR----VIEVVSRERTQFVGTIQMFDKHAFLI---PDNTKTGVKIY 178
Query: 429 ---EEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSG 485
E+ + + +I W + + FP V+ G + ++ +IL I
Sbjct: 179 IPFEKLNKAKNKDKALVKITVWPKSAEFPFGEVIQTLGGNSLHDNEMISILIGQGIPIE- 237
Query: 486 FSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVG 545
F + ++ V E+ E+ R+D R FTIDP+ A D DDALSI +L +G +G
Sbjct: 238 FEADVMNEAEQVTLELDPVEVAKRRDFREILTFTIDPADAKDFDDALSIRKLENGHLEIG 297
Query: 546 VHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIF 605
VHIADVS +V P +A+D EA R SVY++ R IPMLP LS V SL P D+ FS
Sbjct: 298 VHIADVSQYVKPDSAMDKEALRRGNSVYLVDRVIPMLPEQLSNMVCSLRPKEDKFTFSAV 357
Query: 606 WDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWS 665
++L+ G + + W G+TVI S + +YE AQ+I++G EG +
Sbjct: 358 FELDENGKMYNEWFGKTVIHSDHRFAYEDAQEILEG----------AEGPYK-------- 399
Query: 666 DVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEE 725
+ L +++KI + +RF GAL + + + F DE P D V+ +D + L EE
Sbjct: 400 ---EELHILDKIAKIYRKERFKQGALMINSEEIRFKLDENKEPIDVVVKVSKDAHQLIEE 456
Query: 726 FMLLANKTAAEVIARAF----PDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQF 781
FMLLANK A + P + R H P+ K+ F F K G L+ +S +
Sbjct: 457 FMLLANKRVAMFVGAPQKGKDPVPFVYRIHDKPDPEKIALFGLFLDKFGYSLEFTSPEKA 516
Query: 782 HQSLEQARE--KLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTH 839
QS+ + +LK++Y I+ A R M A+Y D + GHY LAF Y H
Sbjct: 517 AQSINKLLNDIRLKNEY---SIIQQMAIRSMAKATY-------DTDNIGHYGLAFQYYGH 566
Query: 840 FTSPLRRYPDLVVHRTLNAALE 861
FTSP+RRY DL+VHR L LE
Sbjct: 567 FTSPIRRYADLMVHRILLECLE 588
>gi|350629602|gb|EHA17975.1| hypothetical protein ASPNIDRAFT_198713 [Aspergillus niger ATCC 1015]
Length = 1375
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 194/725 (26%), Positives = 321/725 (44%), Gaps = 77/725 (10%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R +F P+ + L G + RVN NR +AY + D+ I G +NRA
Sbjct: 419 RKTLFTPYLPQANLPALLSNGQLVAGILRVNKKNRSDAYVTTPDLDADIFICGSKDRNRA 478
Query: 216 VEGDFVLIK-VDRLSLWAKMKGFSNNSSI--VEDSNLPTEANG---MHSDICKGKSKVDV 269
+EGDFV ++ +D +W++ K + ++ + A G SD + +V
Sbjct: 479 LEGDFVAVELLDVDEVWSQKKEKEEKKKRKDITEARAGSSAGGDKLSRSDSGTNGDRQEV 538
Query: 270 SYEYS---NCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQ 326
+ S +L +DD +E EG + + SD + + +
Sbjct: 539 GPDGSIRRRGSLRQRPTQKKNDD----------VEVEGQSLLLVEEDEISDEQKPLYAGH 588
Query: 327 QNDGMNAIERLSAMISSYPTK--RPTGRVVSIIERSPR--RDGIVGFLNVNQWFNYKGGS 382
+ IER++ + S RP+ + + + R RDG G
Sbjct: 589 I---VAVIERIAGQMFSGTLGLLRPSSQATKEKQEAERLARDG--------------GHG 631
Query: 383 RKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLP-DSIKKRLEEGDATIEMELVA 441
R+ ++ + + + PT + P + + + P D ++K E + +
Sbjct: 632 RQQQERQQDKPKI-----VWFKPTDKRVPLIAIPTEQAPRDFVEKHQEYAN-----RIFV 681
Query: 442 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEV 501
A I W S P ++ G G+++ + A+L +N FS L + W V
Sbjct: 682 ACIKRWPITSLHPFGTLVEQLGEMGDLKVETEALLRDNNFGSDEFSDAVLKSIGWDDWSV 741
Query: 502 PQEE---LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPG 558
E L +R+D R FT++PS +LD+A I+ L+DG VG+H+ D+++FV
Sbjct: 742 SNENEAVLATRRDFRQETTFTVNPSGTKELDNAFHIKPLADGKVEVGIHVTDIAHFVKAN 801
Query: 559 TALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR- 617
+ +D EA+ R T+VY++ R + MLP +S E+ +L PG DR S+ + N +D
Sbjct: 802 SLVDREAKKRGTAVYLMNRLVNMLPTRVSNELCALLPGEDRFTVSVTFKANPETGAIDDD 861
Query: 618 -WIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 676
WIG+++I+S +LSY+ I G + + ++K+LY
Sbjct: 862 VWIGKSIIKSSGRLSYDEVDAAIQGTSALAVPGITAD----------------TLKALYA 905
Query: 677 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 736
V+ ++ R + R+ + ++ D+ P + + + L EE AN A
Sbjct: 906 VTSKFREARLGNRVSRIPPLRLLYQLDDENVPVEHNIFHSSPVRELVEELSYKANFLVAR 965
Query: 737 VIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAR-EKLKDD 795
+ A PD A LRR +PN R+L F +K G LD +SSG SL Q + + L+
Sbjct: 966 KLVTALPDKAFLRRQMSPNPRRLHLFVERMNKLGYGLDATSSGTLQSSLCQVQDDDLRKV 1025
Query: 796 YVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRT 855
+ +++ A MQ A Y+ +G +DD HY L PVYTHFT+P RRY D+VVHR
Sbjct: 1026 SFGMETILHKA---MQRAKYYVAGSVQDDQRQ-HYTLNLPVYTHFTNPFRRYADIVVHRQ 1081
Query: 856 LNAAL 860
L A L
Sbjct: 1082 LEAVL 1086
>gi|225012542|ref|ZP_03702978.1| ribonuclease R [Flavobacteria bacterium MS024-2A]
gi|225003519|gb|EEG41493.1| ribonuclease R [Flavobacteria bacterium MS024-2A]
Length = 717
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 160/430 (37%), Positives = 229/430 (53%), Gaps = 25/430 (5%)
Query: 438 ELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV 497
E V A + +W E+ P ++ G+ GE E +I+AIL+E + F E +
Sbjct: 181 EKVVAVLKDWQEKRESPSGRIIKSLGQPGEKETEIHAILHEYGLPYE-FPKEIEEAAEKI 239
Query: 498 PWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLP 557
++ Q+E+ R+D R+ FTIDP TA D DDALS + LS+G+ VG+HIADVSY+V P
Sbjct: 240 KKDLDQKEIKKRRDFRDVLTFTIDPITAKDFDDALSFKTLSNGLFEVGIHIADVSYYVQP 299
Query: 558 GTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR 617
T LD EA R+TSVY++ R +PMLP +LS + SL P ++ FS + LN G V +
Sbjct: 300 NTILDQEAYDRATSVYLVDRVVPMLPEVLSNGLCSLRPKEEKFTFSAVFILNIEGTVQEE 359
Query: 618 WIGRTVIRSCCKLSYEHAQDIIDG-KFDVESSNTL-GEGWPQLYGQFEWSDVVRSIKSLY 675
W GRTVI S + SYE QD+++ K V+SS +L G+ + +V ++I L
Sbjct: 360 WYGRTVINSDYRFSYEEVQDVLENQKAQVDSSVSLTGKTY------ILPDNVFKAINILD 413
Query: 676 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 735
+K L+ +R +GA+ + + F D+ P +D + L EEFMLLANK A
Sbjct: 414 FQAKKLRSQRMKNGAISFDRVEVNFHLDDENNPESVYFKTSKDAHKLIEEFMLLANKKVA 473
Query: 736 EVIARAFPDSALL-RRHPAPNMRKLREFEAFCSKHGLQLDTSS---SGQFHQSLEQAREK 791
I + P + R H P+ +KL + S G + + S + + L K
Sbjct: 474 GFINKIQPLPPFVYRTHDDPDEQKLFNLKQTISPFGYSFNPNKKNVSSEINGLLLACNGK 533
Query: 792 LKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 851
+ + L D L R M A Y S D + GHY LAF YTHFTSP+RRYPD++
Sbjct: 534 KEQN--LIDTL---TLRCMSKAEY--STD-----NIGHYGLAFSHYTHFTSPIRRYPDVM 581
Query: 852 VHRTLNAALE 861
VHR L L+
Sbjct: 582 VHRLLQTYLD 591
>gi|239611100|gb|EEQ88087.1| exosome complex exonuclease exoribonuclease [Ajellomyces
dermatitidis ER-3]
Length = 1037
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 187/561 (33%), Positives = 272/561 (48%), Gaps = 68/561 (12%)
Query: 317 DSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWF 376
D E V + ++ + R + ++ +PT RVV I++R+ W
Sbjct: 349 DEKEAVVTEKERRALQEEVRKAHGKTAEGRPQPTARVVGIVKRN--------------WR 394
Query: 377 NYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIE 436
Y G K + + S ++ + + P + PK+ + + + +R
Sbjct: 395 QYVGNIDKISSGTQEQ-SGRRQQTVFVIPMDKRIPKIRIRTRQARELFGQR--------- 444
Query: 437 MELVAARIDEWNEESPFPQAHVLHVFG----RGGEVEPQINAILYENAICCSGFSPESLS 492
+ +D W+ +S +P H + G +G E E A+L E + F L
Sbjct: 445 ---ILITVDAWDRDSRYPTGHFVRSLGELETKGAETE----ALLLEYDVQYRPFPQMVLD 497
Query: 493 CLPCVP--WEVPQE----ELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGV 546
CLP W+VPQ RKDLR+ + +IDP D+DDAL L +G VGV
Sbjct: 498 CLPPEGHNWKVPQNMDDPGWRDRKDLRDLLVCSIDPPGCQDIDDALHARPLPNGNFEVGV 557
Query: 547 HIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFW 606
HIADVS+FV P T +D EA +R T+VY++ ++I MLP+LL ++ SL P V R AFS W
Sbjct: 558 HIADVSHFVKPNTPMDTEASMRGTTVYLVDKRIDMLPMLLGTDLCSLKPHVQRYAFSNIW 617
Query: 607 DLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSD 666
++ + +VV ++VI S SYE AQ ID K + +
Sbjct: 618 EMTPSAEVVSSTCTKSVILSREAFSYEQAQLRIDDKSKTD-------------------E 658
Query: 667 VVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLS-GREDLNFLFE 724
+ S+++L +++K+LK KR GAL L + + D E P V + D N L E
Sbjct: 659 LTESMRTLLKLAKLLKQKRMDAGALNLASPEVRIETDSELSDPMTDVKTKALLDTNSLVE 718
Query: 725 EFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCS-KHGLQLDTSSSGQFHQ 783
EFML AN T A I ++FP +ALLRRH P E A S K + LD SSS
Sbjct: 719 EFMLHANTTVAAKIFKSFPQTALLRRHATPPPSNFEELIAQLSKKRNMTLDVSSSLALAT 778
Query: 784 SLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTS 842
SL++ + F+ L+ ATR M A YFC+G ++++ HY LA +YTHFTS
Sbjct: 779 SLDRCVDPANP---FFNTLVRILATRCMTSAEYFCAGAHA-ESEFRHYGLASTIYTHFTS 834
Query: 843 PLRRYPDLVVHRTLNAALEAE 863
P+RRY DLVVHR L AA+ E
Sbjct: 835 PIRRYADLVVHRQLAAAIGYE 855
Score = 42.7 bits (99), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 156 RCKIFAP-HWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNR 214
R ++F P ++SM + L G + ++ V+ +N LE ++ +LI G NR
Sbjct: 251 RGELFYPEYYSMSKLMTGLRAGTLHQGVFNVSPYNYLEGSVQVAAFDKSLLILGRDNSNR 310
Query: 215 AVEGDFVLIKVDRLSLW 231
A+ GD V+++V W
Sbjct: 311 AIAGDIVVVEVLPRDQW 327
>gi|386819388|ref|ZP_10106604.1| ribonuclease R [Joostella marina DSM 19592]
gi|386424494|gb|EIJ38324.1| ribonuclease R [Joostella marina DSM 19592]
Length = 729
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 155/446 (34%), Positives = 233/446 (52%), Gaps = 34/446 (7%)
Query: 429 EEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSP 488
E GD I I +W +++ P ++ V G+ GE + +I+AIL E + + F
Sbjct: 185 EHGDKVI------VEIIDWPKDADSPNGKIVQVLGKPGEHDTEIHAILAEYGLPYN-FPE 237
Query: 489 ESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHI 548
E + + +EE+ R+D+R+ FTIDP A D DDALS + L DG VG+HI
Sbjct: 238 EVEHYANKLDTSITKEEIAKRRDMRDVPTFTIDPKDAKDFDDALSFQVLEDGNFEVGIHI 297
Query: 549 ADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDL 608
ADVS+++ + L+ EA R+TSVY++ R +PMLP +LS SL P ++L FS + +
Sbjct: 298 ADVSHYIDLDSVLEEEAYNRATSVYLVDRVVPMLPEILSNNACSLRPNEEKLTFSAVFKM 357
Query: 609 NSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQ-FEWSD- 666
N V+D+W GRTV S + +YE AQ +I E+ N L G+ +E +
Sbjct: 358 NKDAQVLDKWFGRTVTYSDRRFAYEEAQAMI------ENQNNSVPADVSLTGESYEVENH 411
Query: 667 VVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEF 726
+ +I +L E++K+++ +R + GA+ + + F ++ P +D N L EEF
Sbjct: 412 IAEAIITLDEMAKLMRGRRLSAGAISFDKVEVKFELNDKSEPIGVYFKTTKDANKLIEEF 471
Query: 727 MLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLE 786
MLLAN+ AE I + + + R H P+ KL + SK G +D S SL
Sbjct: 472 MLLANRKVAEFIGKQ-KKTFVYRVHDEPDDEKLMLLQGVISKFGYSIDMKSKKAVTSSLN 530
Query: 787 QAREKLK--DDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPL 844
E+++ + L D L R M A Y + GHY LAF YTHFTSP+
Sbjct: 531 ALLEEVQGTKEQNLVDTL---TIRTMSKAVYTTD-------NIGHYGLAFDYYTHFTSPI 580
Query: 845 RRYPDLVVHRTLN------AALEAEK 864
RRYPD++VHR L A+++AEK
Sbjct: 581 RRYPDVMVHRLLQHYLDGGASVDAEK 606
>gi|261205888|ref|XP_002627681.1| exosome complex exonuclease exoribonuclease [Ajellomyces
dermatitidis SLH14081]
gi|239592740|gb|EEQ75321.1| exosome complex exonuclease exoribonuclease [Ajellomyces
dermatitidis SLH14081]
Length = 1039
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 188/561 (33%), Positives = 274/561 (48%), Gaps = 68/561 (12%)
Query: 317 DSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWF 376
D E V + ++ + R + ++ +PT RVV I++R+ W
Sbjct: 351 DEKEAVVTEKERRALQEEVRKAHGKTAEGRPQPTARVVGIVKRN--------------WR 396
Query: 377 NYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIE 436
Y G K + + S ++ + + P + PK+ + + + +R+
Sbjct: 397 QYVGNIDKISSGTQEQ-SGRRQQTVFVIPMDKRIPKIRIRTRQARELFGQRI-------- 447
Query: 437 MELVAARIDEWNEESPFPQAHVLHVFG----RGGEVEPQINAILYENAICCSGFSPESLS 492
L+ +D W+ +S +P H + G +G E E A+L E + F L
Sbjct: 448 --LIT--VDAWDRDSRYPTGHFVRSLGELETKGAETE----ALLLEYDVQYRPFPQMVLD 499
Query: 493 CLPCVP--WEVPQE----ELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGV 546
CLP W+VPQ RKDLR+ + +IDP D+DDAL L +G VGV
Sbjct: 500 CLPPEGHNWKVPQNMDDPGWRDRKDLRDLLVCSIDPPGCQDIDDALHARPLPNGNFEVGV 559
Query: 547 HIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFW 606
HIADVS+FV P T +D EA +R T+VY++ ++I MLP+LL ++ SL P V R AFS W
Sbjct: 560 HIADVSHFVKPNTPMDTEASMRGTTVYLVDKRIDMLPMLLGTDLCSLKPHVQRYAFSNIW 619
Query: 607 DLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSD 666
++ + +VV ++VI S SYE AQ ID K + +
Sbjct: 620 EMTPSAEVVSSTCTKSVILSREAFSYEQAQLRIDDKSKTD-------------------E 660
Query: 667 VVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLS-GREDLNFLFE 724
+ S+++L +++K+LK KR GAL L + + D E P V + D N L E
Sbjct: 661 LTESMRTLLKLAKLLKQKRMDAGALNLASPEVRIETDSELSDPMTDVKTKALLDTNSLVE 720
Query: 725 EFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCS-KHGLQLDTSSSGQFHQ 783
EFML AN T A I ++FP +ALLRRH P E A S K + LD SSS
Sbjct: 721 EFMLHANTTVAAKIFKSFPQTALLRRHATPPPSNFEELIAQLSKKRNMTLDVSSSLALAT 780
Query: 784 SLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTS 842
SL++ + F+ L+ ATR M A YFC+G ++++ HY LA +YTHFTS
Sbjct: 781 SLDRCVDPANP---FFNTLVRILATRCMTSAEYFCAGAHA-ESEFRHYGLASTIYTHFTS 836
Query: 843 PLRRYPDLVVHRTLNAALEAE 863
P+RRY DLVVHR L AA+ E
Sbjct: 837 PIRRYADLVVHRQLAAAIGYE 857
Score = 42.7 bits (99), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 156 RCKIFAP-HWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNR 214
R ++F P ++SM + L G + ++ V+ +N LE ++ +LI G NR
Sbjct: 253 RGELFYPEYYSMSKLMTGLRAGTLHQGVFNVSPYNYLEGSVQVAAFDKSLLILGRDNSNR 312
Query: 215 AVEGDFVLIKVDRLSLW 231
A+ GD V+++V W
Sbjct: 313 AIAGDIVVVEVLPRDQW 329
>gi|354548336|emb|CCE45072.1| hypothetical protein CPAR2_700760 [Candida parapsilosis]
Length = 985
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 216/723 (29%), Positives = 333/723 (46%), Gaps = 118/723 (16%)
Query: 160 FAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEGD 219
F ++S + ++ G ++ + ++++N L+ + + +LI G NRA D
Sbjct: 242 FPEYYSNARIMAGIKNGTLYQGVLNISSYNYLQGEVNVSAFKKPLLIQGSRNLNRAFNSD 301
Query: 220 FVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCTLL 279
V+++ L K K +++I+E+ E G++ + G N +
Sbjct: 302 SVIVE-----LLPKDKWKEPSTTIIEE-----ETIGVNDNPDDGGE--------DNGNVA 343
Query: 280 SEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSA 339
+ +G+ D + A QE ++ +T STE+ +RL
Sbjct: 344 ASEGVVSDKERLLLA--QEAMK------------TTKGSTEE-------------KRL-- 374
Query: 340 MISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDRE 399
+PT +VV I RS W Y G + +S+S D
Sbjct: 375 --------QPTAKVVGIARRS--------------WRYYVG------QIAPTSVSQED-- 404
Query: 400 YIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVL 459
+ K ++++ K LP I+ R + + +V +D W +S +P H +
Sbjct: 405 ----SGNSAKNCFVILMDKTLP-KIRIRTRKAKEYLGQRIVVV-VDSWPSDSKYPNGHFV 458
Query: 460 HVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVP--WEVPQ------EELLSRKD 511
G E + A+L E+ + FS L CLP W VP +L R D
Sbjct: 459 RALGEVESAEAETEALLLEHDVEYRPFSKNVLDCLPKEGDNWVVPDIANTDDTQLQKRVD 518
Query: 512 LRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTS 571
LR+ + +IDP D+DDAL ++L +G VGVHIADV++FV GTALD E R TS
Sbjct: 519 LRDKLVCSIDPPNCVDIDDALHAQKLPNGNYEVGVHIADVTHFVKAGTALDQEGASRGTS 578
Query: 572 VYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLS 631
VY++ ++I MLP+LL + SL P VDR AFS+ W+++ ++V+ +++I+S S
Sbjct: 579 VYLVDKRIDMLPMLLGTNLCSLKPFVDRFAFSVIWEVDEDANIVNVKFMKSIIKSRQAFS 638
Query: 632 YEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGAL 691
YE AQ ID P + D+ S++ L ++SK LK KR GAL
Sbjct: 639 YEQAQLRIDD--------------PN-----QNDDLTNSMRILLKLSKKLKQKRLDAGAL 679
Query: 692 RLENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRR 750
L + + V + E P + + + N L EEFML AN + A I A+P +A+LRR
Sbjct: 680 NLASPEVKVHMDSETSDPQEVEIKKLLETNSLVEEFMLFANISVARKIYDAYPQTAMLRR 739
Query: 751 HPAPNMRKLREFEAFCS--KHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YAT 807
H AP + K+GL + T SS SL++ + D Y F+ LI +T
Sbjct: 740 HAAPPATNFETLNDMLNVRKNGLSISTESSKALADSLDRCVDH-NDPY--FNTLIRIMST 796
Query: 808 RPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYW 867
R M A YF SG + ++ HY LA +YTHFTSP+RRY D+V HR L A+ E L
Sbjct: 797 RCMMAAEYFPSGSY-GYPEFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYENLDL 855
Query: 868 KHR 870
HR
Sbjct: 856 SHR 858
>gi|169607427|ref|XP_001797133.1| hypothetical protein SNOG_06769 [Phaeosphaeria nodorum SN15]
gi|160701406|gb|EAT85420.2| hypothetical protein SNOG_06769 [Phaeosphaeria nodorum SN15]
Length = 1386
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 193/723 (26%), Positives = 323/723 (44%), Gaps = 86/723 (11%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R +F P+ + L G + RVN NR +AY + D+ I G +NRA
Sbjct: 443 RKTLFTPYLPQATLPALLGDGQLVAGVLRVNKKNRSDAYVTTTDLDADIFICGSKDRNRA 502
Query: 216 VEGDFVLIKV-DRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYS 274
+EGD V +++ D +W + + +++ D G V+
Sbjct: 503 LEGDLVAVELLDVDEVWGQKREKEEKKKRKDNA-----------DPRGGSIAVN------ 545
Query: 275 NCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAI 334
D + E+ N+ I R G T+K + + +G + +
Sbjct: 546 ------------DATTQPESSNEGGIRRRGS--------LRQRPTQKKNDDVEVEGQSLL 585
Query: 335 ERLSAMISSYPTKRPTGRVVSIIERSPRR--DGIVGFLNVNQWFNY-KGGSRKDAKKNRS 391
I+ G +V++IER + G +G L + K + + A++ S
Sbjct: 586 LMEEEEINDEQKPLYAGHIVAVIERVAGQMFSGSLGLLRPSSAATKEKQEAERQAREGNS 645
Query: 392 SLSVPDRE----YIQLTPTHPKYPKMVVLVKDLP-DSIKKRLEEGDATIEMELVAARIDE 446
P+R+ + PT + P + + + P D ++K + D + A I
Sbjct: 646 GRPQPERQDKPKIVWFKPTDKRVPLIAIPTEQAPRDFVEKHQDYAD-----RIFVACIKR 700
Query: 447 WNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQE-- 504
W S P ++ G GE++ + +A+L +N FS + + W V +
Sbjct: 701 WPITSLHPFGTLVEQLGVMGELKVETDALLRDNNFGPDDFSDAVIKNVGFEDWSVANDGE 760
Query: 505 -ELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDI 563
L +R+D R+ FTIDP+ + +LDDA+ + L DG +G+H+ADV++F+ + +D
Sbjct: 761 TALENRRDFRSEETFTIDPNGSKELDDAIHFKDLDDGRVEIGIHVADVAHFIKANSLVDR 820
Query: 564 EAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV---DRWIG 620
EA+ R T+VY++ R + MLP LS ++ LNPG DR S+ + ++ + + W+G
Sbjct: 821 EAKKRGTAVYLMNRTVNMLPPRLSNDICCLNPGEDRYTVSVVFKVDPKTGRISEDETWVG 880
Query: 621 RTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKI 680
+ VI+S KL+Y+ +I+G G Q+ + + IK+L+ +++
Sbjct: 881 KAVIKSSGKLTYDEVDSVING------------GEAQVN-----AARAKDIKTLHHIAQK 923
Query: 681 LKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR 740
L+ RF + + ++ D+ P + + + EE +AN A+ +A
Sbjct: 924 LRQARFGGRTEDAPSLRLMYQLDDENVPVEQNIFDSSPAHECIEELSHIANAFVAKKLAA 983
Query: 741 AFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFD 800
A P+ ALLRR PN R+L G Q+DT SSG SL Q ++DD D
Sbjct: 984 ALPEKALLRRQQFPNPRRLTTIADRMGAIGYQIDTESSGSLQNSLFQ----VEDD----D 1035
Query: 801 ILINYAT---RPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLN 857
I T + M A YF +G +D + HYAL P+YTHFT+P RRY D++VHR L
Sbjct: 1036 IRKGMETLVIKSMPRAKYFVAGKLPED-QYPHYALNLPLYTHFTNPSRRYADIIVHRQLE 1094
Query: 858 AAL 860
AL
Sbjct: 1095 VAL 1097
>gi|120437635|ref|YP_863321.1| ribonuclease R [Gramella forsetii KT0803]
gi|117579785|emb|CAL68254.1| ribonuclease R [Gramella forsetii KT0803]
Length = 732
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 144/431 (33%), Positives = 226/431 (52%), Gaps = 24/431 (5%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 499
V +EW +++ P + V G GE +I++IL + + F E +
Sbjct: 188 VVVEFEEWPKKADSPLGKITRVLGTPGEHHTEIHSILAQYGLPHD-FPEEVEEFANKIDT 246
Query: 500 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 559
+ +EE+ R+D+R+ FTIDP A D DDALS E+L +G +G+HIADVS+++ PGT
Sbjct: 247 SINKEEISKRRDMRDVLTFTIDPKDAKDFDDALSFEKLKNGNYEIGIHIADVSHYLQPGT 306
Query: 560 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 619
LD EA R+TSVY++ R +PMLP +LS SL P ++ FS ++++ V ++W
Sbjct: 307 ILDEEAYERATSVYLVDRVVPMLPEILSNNACSLRPKEEKFTFSAVFEIDDNATVKNQWF 366
Query: 620 GRTVIRSCCKLSYEHAQDIID-GKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVS 678
GRTV S + +YE AQ I++ G + ++ + G ++ ++ +L ++
Sbjct: 367 GRTVTYSDERFAYEEAQHILETGTGTIPDDVSIRNHAYSVRGA-----LIEAVVTLNTLA 421
Query: 679 KILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVI 738
K ++ +R DGA+ + + F +E P +D N L EEFMLLAN+ AE I
Sbjct: 422 KKMRTRRMKDGAISFDKVEVKFNLNEDNNPVGVFFKTAKDANKLIEEFMLLANRKVAEYI 481
Query: 739 ARAFPDSALL-RRHPAPNMRKLREFEAFCSKHGLQLD----TSSSGQFHQSLEQAREKLK 793
+ P + R H P+ +KL + + G +L+ +S++ ++ LE + + +
Sbjct: 482 GKQSPKKTFVYRNHDEPDDQKLASLQTIVGRFGHKLNLKDRSSTTSSLNKLLEDVQGRKE 541
Query: 794 DDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVH 853
+ V D L A R M A Y GHY LAF YTHFTSP+RRYPD++VH
Sbjct: 542 QNMV--DTL---AIRTMSKAYYGTES-------IGHYGLAFDYYTHFTSPIRRYPDVMVH 589
Query: 854 RTLNAALEAEK 864
R L L+ K
Sbjct: 590 RLLQHYLDGAK 600
>gi|375144261|ref|YP_005006702.1| ribonuclease R [Niastella koreensis GR20-10]
gi|361058307|gb|AEV97298.1| ribonuclease R [Niastella koreensis GR20-10]
Length = 699
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 159/452 (35%), Positives = 228/452 (50%), Gaps = 51/452 (11%)
Query: 420 LPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYEN 479
+P++ ++GD I RI EW E+ P V+ + G E + + IL EN
Sbjct: 115 IPETALNGAKDGDRVI------VRITEW-EKQKKPVGAVIQIMEAGNEGDMAMKEILMEN 167
Query: 480 AICCSGFSPES-LSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLS 538
F PE+ + +P + +E+ R+D+R FTIDP A D DDALSI L
Sbjct: 168 GFPL--FFPENVIEETERIPDTISPDEIKLRRDVREVLTFTIDPVDARDFDDALSIRLLK 225
Query: 539 DGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVD 598
+G+ +GVHIADVS+FV P TALD EA R+TSVY+ R PMLP +S E+ SL P D
Sbjct: 226 NGLYEIGVHIADVSHFVEPDTALDKEAYDRATSVYLPDRVAPMLPERISNELCSLRPHED 285
Query: 599 RLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQL 658
+L FS + + AG++ W+G+TVI S + +YE Q+II+ GEG Q
Sbjct: 286 KLTFSAIFQITDAGEISQYWLGKTVIHSDHRFTYEEVQEIIEK----------GEGLYQ- 334
Query: 659 YGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGRED 718
I L ++++ + KRF GA+ + + F DE G P ++ ++
Sbjct: 335 ----------GEILLLNKLAQQFRAKRFNKGAINFSSQEVRFKLDETGKPIGIMVKESKE 384
Query: 719 LNFLFEEFMLLANKTAAEVIARAFPDSALL----RRHPAPNMRKLREFEAFCSKHGLQLD 774
+ L EEFMLLAN+ AE + + + L R H P+ +KL F F K+G D
Sbjct: 385 AHQLIEEFMLLANRIVAENVGKVKVNKKDLPFPYRVHDTPDEQKLAPFVEFAKKYGHTFD 444
Query: 775 TSS----SGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHY 830
TS+ + F+Q L+ + K + +L R M A Y + GHY
Sbjct: 445 TSTPEGIAASFNQMLQDVQGKPEQ-----HVLEQLGIRTMAKAIYTTE-------NIGHY 492
Query: 831 ALAFPVYTHFTSPLRRYPDLVVHRTLNAALEA 862
L F Y HFTSP+RRYPD++VHR L L+
Sbjct: 493 GLGFKQYCHFTSPIRRYPDVMVHRILQDVLKG 524
>gi|321263374|ref|XP_003196405.1| nucleolar exosome component, involved in rRNA processing and RNA
degradation; Dis3p [Cryptococcus gattii WM276]
gi|317462881|gb|ADV24618.1| Nucleolar exosome component, involved in rRNA processing and RNA
degradation, putative; Dis3p [Cryptococcus gattii WM276]
Length = 1002
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 183/540 (33%), Positives = 256/540 (47%), Gaps = 83/540 (15%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQL----- 403
PTGRVV I++R+ W Y +RSSLS D + L
Sbjct: 382 PTGRVVGIVKRN--------------WRAYV------CHLDRSSLS--DSAFTSLAQQTV 419
Query: 404 --TPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHV 461
TP P++ + + P + ++ + ID W S +P H +
Sbjct: 420 FATPLSRALPRIRLRTRQAPQLVDQK------------ILVTIDNWYPTSRYPDGHFVRA 467
Query: 462 FGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVP----WEVPQEEL-----LSRKDL 512
G+ E + ++L E + F L+CLP P W VP++++ R+DL
Sbjct: 468 LGKVASKEAEQESLLLEYEVPYRPFGKAILNCLP--PEGDNWVVPKKDMECLEWRDREDL 525
Query: 513 RNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSV 572
R I +IDP D+DDAL RL +G GVHIADVS+FV P +D EA R T+V
Sbjct: 526 RGLDICSIDPPGCQDIDDALHARRLPNGNIEAGVHIADVSHFVHPDNPMDSEAASRGTTV 585
Query: 573 YMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSY 632
Y++ ++I MLP LL + SL P V+RLAFS+ W+LN +VVD ++VI S +Y
Sbjct: 586 YLVDKRIDMLPSLLGTNLCSLRPFVERLAFSVIWELNEDAEVVDVRFVKSVIASKEAFTY 645
Query: 633 EHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALR 692
E AQ D K S N + SI+ L ++ LK R GAL
Sbjct: 646 EAAQLRKDDK----SMN---------------DQLTNSIRLLNHLAIKLKAARMRAGALS 686
Query: 693 LENS--KPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRR 750
L + K E P + + N L EEFMLLAN A+ I FP +A+LRR
Sbjct: 687 LSSPELKIHLASSESAEPINVEQKKLLETNSLVEEFMLLANIWVAKKIQEVFPATAVLRR 746
Query: 751 H---PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YA 806
H P N L++ + G+ LD S+S SL+ + + F+ L+ A
Sbjct: 747 HSPPPKTNFEVLQDI--LIKRKGIALDVSTSKALADSLDACVIAGEPE---FNTLVRIMA 801
Query: 807 TRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
TR M A YFCSG ++ +GHY LA P+YTHFTSP+RRY D++ HR L AA+ L+
Sbjct: 802 TRCMLSAEYFCSGSVSKES-YGHYGLASPIYTHFTSPIRRYADVLAHRQLAAAINYTPLH 860
>gi|145239647|ref|XP_001392470.1| cell wall biogenesis protein phosphatase Ssd1 [Aspergillus niger CBS
513.88]
gi|134076981|emb|CAK45390.1| unnamed protein product [Aspergillus niger]
Length = 1372
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 197/724 (27%), Positives = 320/724 (44%), Gaps = 78/724 (10%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R +F P+ + L G + RVN NR +AY + D+ I G +NRA
Sbjct: 419 RKTLFTPYLPQANLPALLSNGQLVAGILRVNKKNRSDAYVTTPDLDADIFICGSKDRNRA 478
Query: 216 VEGDFVLIK-VDRLSLWAKMKGFSNNSSI--VEDSNLPTEANG---MHSDICKGKSKVDV 269
+EGDFV ++ +D +W++ K + ++ + A G SD + +V
Sbjct: 479 LEGDFVAVELLDVDEVWSQKKEKEEKKKRKDITEARAGSSAGGDKLSRSDSGTNGDRQEV 538
Query: 270 SYEYS---NCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQ 326
+ S +L +DD +E EG + + SD + + +
Sbjct: 539 GPDGSIRRRGSLRQRPTQKKNDD----------VEVEGQSLLLVEEDEISDEQKPLYAGH 588
Query: 327 QNDGMNAIERLSAMISSYPTK--RPTGRVVSIIERSPR--RDGIVGFLNVNQWFNYKGGS 382
+ IER++ + S RP+ + + + R RDG G
Sbjct: 589 I---VAVIERIAGQMFSGTLGLLRPSSQATKEKQEAERLARDG--------------GHG 631
Query: 383 RKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLP-DSIKKRLEEGDATIEMELVA 441
R+ ++ + + + PT + P + + + P D ++K E + +
Sbjct: 632 RQQQERQQDKPKI-----VWFKPTDKRVPLIAIPTEQAPRDFVEKHQEYAN-----RIFV 681
Query: 442 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEV 501
A I W S P ++ G G+++ + A+L +N FS L + W V
Sbjct: 682 ACIKRWPITSLHPFGTLVEQLGEMGDLKVETEALLRDNNFGSDEFSDAVLKSIGWDDWSV 741
Query: 502 PQEE---LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPG 558
E L +R+D R FT++PS +LD+A I+ L+DG VG+H+ D+++FV
Sbjct: 742 SNENEAVLATRRDFRQETTFTVNPSGTKELDNAFHIKPLADGKVEVGIHVTDIAHFVKAN 801
Query: 559 TALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR- 617
+ +D EA+ R T+VY++ R + MLP +S E+ +L PG DR S+ + N +D
Sbjct: 802 SLVDREAKKRGTAVYLMNRLVNMLPTRVSNELCALLPGEDRFTVSVTFKANPETGAIDDD 861
Query: 618 -WIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 676
WIG+++I+S +LSY+ I G T P + ++K+LY
Sbjct: 862 VWIGKSIIKSSGRLSYDEVDAAIQG--------TSALAVPGI--------TADTLKALYA 905
Query: 677 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 736
V+ ++ R + R+ + ++ D+ P + + + L EE AN A
Sbjct: 906 VTSKFREARLGNRVSRIPPLRLLYQLDDENVPVEHNIFHSSPVRELVEELSYKANFLVAR 965
Query: 737 VIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDY 796
+ A PD A LRR +PN R+L F +K G LD +SSG SL Q ++ DD
Sbjct: 966 KLVTALPDKAFLRRQMSPNPRRLHLFVERMNKLGYGLDATSSGTLQSSLCQVQD---DD- 1021
Query: 797 VLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTL 856
L + + MQ A Y+ +G +DD HY L PVYTHFT+P RRY D+VVHR L
Sbjct: 1022 -LRKGMETILHKAMQRAKYYVAGSVQDDQRQ-HYTLNLPVYTHFTNPFRRYADIVVHRQL 1079
Query: 857 NAAL 860
A L
Sbjct: 1080 EAVL 1083
>gi|344202636|ref|YP_004787779.1| ribonuclease R [Muricauda ruestringensis DSM 13258]
gi|343954558|gb|AEM70357.1| ribonuclease R [Muricauda ruestringensis DSM 13258]
Length = 727
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 147/428 (34%), Positives = 221/428 (51%), Gaps = 18/428 (4%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 499
V + +W +++ P V+ V G+ GE +I+AIL E + + F E +
Sbjct: 190 VLVSLGDWPDDADSPYGEVIEVLGKPGEHNTEIHAILAEYGLP-NEFPYEVEEFAKTLDT 248
Query: 500 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 559
+ + E+ R+D+R+ FTIDP A D DDALS ++L +G +G+HIADVS++V P +
Sbjct: 249 SIKESEIAKRRDMRDVLTFTIDPKDAKDFDDALSFQKLENGNYEIGIHIADVSHYVQPDS 308
Query: 560 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 619
L+ EA R+TSVY++ R +PMLP +LS + SL P ++ FS ++++ +V +W
Sbjct: 309 ILEEEAYDRATSVYLVDRVVPMLPEVLSNKACSLRPNEEKYTFSAVFEMDDNAKLVKQWF 368
Query: 620 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 679
GRT I S + +YE AQ II + E + E + DVV ++ + ++K
Sbjct: 369 GRTAINSNERFAYEEAQHII----ETEQNKIPKEISIREKAYSVSDDVVEAVLTFDRLAK 424
Query: 680 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 739
I++ R GA+ + + F E P +D N L EEFMLLAN+ AE I
Sbjct: 425 IMRQARMDAGAISFDKIEVKFHLSENNEPVGVYFKEAKDANKLIEEFMLLANRKVAEFIG 484
Query: 740 RAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQARE--KLKDDYV 797
+ + + R H P+ KL S+ G ++ +QSL + E K K +
Sbjct: 485 KQ-KKTFVYRVHDKPDEDKLMALNGVISRFGHSINLKDPKSINQSLNKLLEDVKGKKEQN 543
Query: 798 LFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLN 857
L D L A R M A Y + GHY L F YTHFTSP+RRYPD++VHR L
Sbjct: 544 LVDTL---AIRSMSKAIYTTE-------NIGHYGLGFEYYTHFTSPIRRYPDVMVHRLLQ 593
Query: 858 AALEAEKL 865
L+ EK+
Sbjct: 594 HYLDKEKI 601
>gi|393782655|ref|ZP_10370838.1| ribonuclease R [Bacteroides salyersiae CL02T12C01]
gi|392672882|gb|EIY66348.1| ribonuclease R [Bacteroides salyersiae CL02T12C01]
Length = 713
Score = 241 bits (615), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 150/432 (34%), Positives = 224/432 (51%), Gaps = 45/432 (10%)
Query: 441 AARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPW 499
++ EW +++ P V+ + G+ G+ +++AIL E + P+++ +P
Sbjct: 192 VVKVIEWPDKAKNPIGQVIDILGKAGDNTTEMHAILAEFGLPY--VYPQAVEKAADKIPA 249
Query: 500 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 559
E+ EE+ R+D R FTIDP A D DDALSI +L D + VGVHIADV+++V G+
Sbjct: 250 EITAEEIARREDFRKVTTFTIDPKDAKDFDDALSIRKLKDNLWEVGVHIADVTHYVKEGS 309
Query: 560 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 619
+D EA+ R+TSVY++ R IPMLP L + SL P ++LAFS+ +D+ GDV + +
Sbjct: 310 IIDKEAEKRATSVYLVDRTIPMLPERLCNFLCSLRPHEEKLAFSVIFDITEKGDVKNSRV 369
Query: 620 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 679
TVI S + +YE AQ II+ K D + L ++K
Sbjct: 370 VHTVIYSDRRFTYEEAQQIIETK---------------------NGDFKDEVLMLDTIAK 408
Query: 680 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 739
L++KRF GA+ + + F DE G P +D N L EEFMLLAN+T AE I
Sbjct: 409 ALREKRFAAGAINFDRYEVKFEIDEKGKPVSVYFKESKDANKLVEEFMLLANRTVAEQIG 468
Query: 740 RA--FPDSALL--RRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQARE 790
R + +L R H P+ KL F ++ G +L TS S + L+ +
Sbjct: 469 RVPKGKKAKVLPYRIHDLPDPEKLDNLNQFIARFGYKLRTSGTKTDISKSINHLLDDIQG 528
Query: 791 KLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDL 850
K ++ +++ + R MQ A Y + GHY LAF YTHFTSP+RR+PD+
Sbjct: 529 KKEE-----NLIETVSIRAMQKARYSTH-------NIGHYGLAFDYYTHFTSPIRRFPDM 576
Query: 851 VVHRTLNAALEA 862
+VHR + L+
Sbjct: 577 MVHRLVTKYLDG 588
>gi|405120418|gb|AFR95189.1| mitotic control protein dis3 [Cryptococcus neoformans var. grubii
H99]
Length = 1002
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 182/538 (33%), Positives = 257/538 (47%), Gaps = 79/538 (14%)
Query: 349 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQL----- 403
PTGRVV I++R+ W Y +RSSLS D + L
Sbjct: 382 PTGRVVGIVKRN--------------WRAYV------CHLDRSSLS--DSAFTSLAQQTV 419
Query: 404 --TPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHV 461
TP P++ + + P ++++ + ID W+ S +P H +
Sbjct: 420 FATPLSRALPRIRLRTRQAPQLVEQK------------ILVTIDNWSPTSRYPDGHFVRA 467
Query: 462 FGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEEL-----LSRKDLRN 514
G+ E + ++L E + F L+CLP W VP++++ R+DLR
Sbjct: 468 LGKVASKEAEQESLLLEYEVPYRPFGKAILNCLPPEGDSWVVPKKDMECLEWRDREDLRG 527
Query: 515 FCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYM 574
I +IDP D+DDAL RL +G GVHIADVS+FV P +D EA R T+VY+
Sbjct: 528 LDICSIDPPGCQDIDDALHARRLPNGNIEAGVHIADVSHFVHPDNPMDSEAASRGTTVYL 587
Query: 575 LQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEH 634
+ ++I MLP LL + SL P V+RLAFS+ W+LN +VVD ++VI S +YE
Sbjct: 588 VDKRIDMLPSLLGTNLCSLRPFVERLAFSVIWELNEDAEVVDIRFVKSVIASKEAFTYEA 647
Query: 635 AQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLE 694
AQ D K S N + SI+ L ++ LK R GAL L
Sbjct: 648 AQLRKDDK----SMN---------------DPLTNSIRLLNHLAIKLKAARMRAGALSLS 688
Query: 695 NS--KPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH- 751
+ K E P + + N L EEFMLLAN A+ I FP +A+LRRH
Sbjct: 689 SPELKIHLASSESTEPINVEQKKLLETNSLVEEFMLLANIWVAKKIQEVFPATAVLRRHS 748
Query: 752 --PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATR 808
P N L++ + G+ LD S+S SL+ + + F+ L+ ATR
Sbjct: 749 PPPKTNFEVLQDI--LMKRKGITLDVSTSKALADSLDACVIAGEPE---FNTLVRIMATR 803
Query: 809 PMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 866
M A YFCSG ++ +GHY LA P+YTHFTSP+RRY D++ HR L AA+ L+
Sbjct: 804 CMLSAEYFCSGSVSKES-YGHYGLASPIYTHFTSPIRRYADVLAHRQLAAAINYTPLH 860
>gi|383124676|ref|ZP_09945339.1| ribonuclease R [Bacteroides sp. 1_1_6]
gi|251841167|gb|EES69248.1| ribonuclease R [Bacteroides sp. 1_1_6]
Length = 718
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 147/431 (34%), Positives = 220/431 (51%), Gaps = 45/431 (10%)
Query: 442 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWE 500
++ EW +++ P V+ + G G+ +++AIL E + P+++ + +P E
Sbjct: 196 VKVTEWPDKAKNPIGQVIDILGVAGDNTTEMHAILAEFGLPY--VYPKAVETAADKIPAE 253
Query: 501 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 560
+ EE+ R+D R FTIDP A D DDALSI + DG+ VGVHIADV+++V G
Sbjct: 254 ITPEEIARREDFRKVTTFTIDPKDAKDFDDALSIRPIKDGLWEVGVHIADVTHYVKEGGI 313
Query: 561 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIG 620
+D EA+ R+TSVY++ R IPMLP L + SL P ++LAFS+ +D+ G+V D I
Sbjct: 314 IDKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPNEEKLAFSVIFDITEKGEVKDSRIV 373
Query: 621 RTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKI 680
TVI S + +YE AQ II+ K D + L ++K
Sbjct: 374 HTVINSDRRFTYEEAQQIIETK---------------------TGDFKEEVLMLDTIAKA 412
Query: 681 LKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR 740
L++KRF GA+ + + F DE G P +D N L EEFMLLAN+T AE + R
Sbjct: 413 LREKRFAAGAINFDRYEVKFEIDEKGKPISVYFKESKDANKLVEEFMLLANRTVAEKVGR 472
Query: 741 AFPDSAL----LRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREK 791
+ R H P+ KL F ++ G ++ TS S + L+ K
Sbjct: 473 VPKNKKAKVLPYRIHDLPDPEKLENLSQFIARFGYKVRTSGTKTDISKSINHLLDDIHGK 532
Query: 792 LKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 851
++ +++ + R MQ A Y + GHY LAF YTHFTSP+RR+PD++
Sbjct: 533 KEE-----NLIETVSIRAMQKARYSTH-------NIGHYGLAFDYYTHFTSPIRRFPDMM 580
Query: 852 VHRTLNAALEA 862
VHR + ++
Sbjct: 581 VHRLVTKYMDG 591
>gi|403157686|ref|XP_003307080.2| hypothetical protein PGTG_00030 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375163515|gb|EFP74074.2| hypothetical protein PGTG_00030 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1075
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 184/542 (33%), Positives = 262/542 (48%), Gaps = 68/542 (12%)
Query: 334 IERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSL 393
I + S + T +PTGRVV +I R+ W Y +
Sbjct: 412 ISKTSKKTGAGTTSQPTGRVVGVITRN--------------WRPY--------------V 443
Query: 394 SVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKK-RLEEGDA-TIEMELVAARIDEWNEES 451
DR I ++ V L S+ K R+ A T+ + + ID W S
Sbjct: 444 CHIDRASIPISALQSSLSAHAVFAMPLSRSVPKIRIRTRQASTLANQKILVSIDRWEPSS 503
Query: 452 PFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEELLS- 508
+P+ H + G + + ++L E+ I F L CLP W VP++ +
Sbjct: 504 RYPEGHFVRALGIVESKDTEQESLLLEHDIPYRPFGKAILDCLPPAGDKWIVPEKNSSAL 563
Query: 509 ---RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEA 565
R+D R I +IDP D+DDAL RL++G VGVHIADVS+FVLP T +D+EA
Sbjct: 564 WNDREDFRELMICSIDPPGCQDIDDALHARRLANGNIEVGVHIADVSHFVLPDTPMDVEA 623
Query: 566 QVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW-IGRTVI 624
R T+VY++ ++I MLP LL + SL P V+RLAFS+ W+L ++ ++VI
Sbjct: 624 ASRGTTVYLVDKRIDMLPSLLGTNLCSLKPEVERLAFSVIWELREEDSKIEAVRFTKSVI 683
Query: 625 RSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDK 684
+S +YE AQ D ++L + ++ SI+ L +++ LK
Sbjct: 684 KSKAAFTYEAAQIRKD-------DSSLKD------------EISESIRLLNKLAIQLKKS 724
Query: 685 RFTDGALRLENS--KPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAF 742
R +GAL L + K E P D + N L EEFMLLAN + A I +F
Sbjct: 725 RMDNGALNLASPEIKIHMSSSESSDPVDVEQKESRETNSLVEEFMLLANISVARRIYESF 784
Query: 743 PDSALLRRH---PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLF 799
P +A+LRRH P N L+ + + GL+LD SSS SL++ + D F
Sbjct: 785 PQTAVLRRHNPPPKTNFEVLQ--DVLLKRRGLELDVSSSASLASSLDKC---IDPDVPAF 839
Query: 800 DILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNA 858
+ L+ ATR M A YF SG DT +GHY LA +YTHFTSP+RRY D++VHR L A
Sbjct: 840 NTLVRIMATRCMLPAEYFGSGSVSKDT-FGHYGLASEIYTHFTSPIRRYADVLVHRQLQA 898
Query: 859 AL 860
A+
Sbjct: 899 AI 900
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 45/89 (50%)
Query: 137 SSCWAYTNKDDNPSHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCK 196
S+ A+ + D N + + + + + + + + ++ G F+ +R N +N LE
Sbjct: 277 STGSAFESDDPNNAQKEKIKSNFYQEYLPLGQIQSGIQSGHLFQGTFRPNPYNYLEGSIF 336
Query: 197 IEGVQTDVLITGIAAQNRAVEGDFVLIKV 225
+ + VL+ G + NRA++GD V +++
Sbjct: 337 HDNFEKPVLLIGRESMNRAIDGDVVAVEL 365
>gi|452846843|gb|EME48775.1| hypothetical protein DOTSEDRAFT_40060 [Dothistroma septosporum NZE10]
Length = 1374
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 195/742 (26%), Positives = 317/742 (42%), Gaps = 114/742 (15%)
Query: 151 HQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIA 210
+Q + R +F P+ + L G + RVN NR +AY + D+ I G
Sbjct: 436 NQQQQRKTLFTPYLPQATLPALLADGQLVAGILRVNKKNRSDAYVTTTDLDADIFICGSK 495
Query: 211 AQNRAVEGDFVLIK-VDRLSLWAKMKGF-------------SNNSSIVEDSNLPTEANGM 256
+NRA+EGD V ++ +D +W + + S + + V D+ E++
Sbjct: 496 DRNRALEGDLVAVELLDVDEVWGQKREKEEKKKRKDVTDQRSGSVTAVNDATTQPESSAD 555
Query: 257 HSDICKG--------KSKVDVSYEYSNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYI 308
+G K DV E + L+ E I+ + + +IER
Sbjct: 556 GGLRRRGSLKQRPTQKKNDDVEVEGQSLLLMEEDEINDEQKPLYAGHIVAVIERVAGQMF 615
Query: 309 NGH----HPSTSDSTEKVSSSQQ-NDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRR 363
+G PS+ + EK + +Q +G + RP ER R
Sbjct: 616 SGSLGLLRPSSQATKEKQEAERQAREGGHG--------------RP--------ERQQER 653
Query: 364 DGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDS 423
IV WF PT + P + + + P
Sbjct: 654 PKIV-------WFK---------------------------PTDKRVPLIAIPTEQAPKD 679
Query: 424 IKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICC 483
R +E ++ A I W S P ++ G G+++ + +A+L +N
Sbjct: 680 FVDRHQE----YAGKIFVACIKRWPITSLHPFGTLVEQLGDAGDLKVETDALLRDNNFGP 735
Query: 484 SGFSPESLSCLPCVPWEVPQEE---LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDG 540
FS + + W + + L R+D R FTIDP+ + +LDDA+ + L+DG
Sbjct: 736 DDFSDAVIKNVGYEDWSIANDSEAALEGRRDFRGEQTFTIDPNGSKELDDAIHFKELADG 795
Query: 541 ISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRL 600
+G+H+ADV++FV + +D EA+ R T VY++ R + MLP LS++V L PG DR
Sbjct: 796 FVEIGIHVADVAHFVKANSLVDREAKKRGTGVYLMNRSVNMLPSKLSQDVCCLQPGEDRY 855
Query: 601 AFSIFWDLNSAGDVVDR--WIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQL 658
S+ +++ G VVD WIG++VI+S KLSY+ +I+G E +++G+
Sbjct: 856 TVSVVLKVDATGRVVDEDTWIGKSVIKSSGKLSYDEVDAVING----EKPSSVGD----- 906
Query: 659 YGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGRED 718
+ R I L+ +++ L+ R+ + + ++ D+ P + +
Sbjct: 907 -------ERTRQILQLHSIAQKLRQARYGSDESSIPPLRLLYQLDDENVPVEHNIFDSSP 959
Query: 719 LNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSS 778
+ + EE N A+ I + + ALLRR +PN R+LR F + G +D S+S
Sbjct: 960 SHEMIEELSHKTNALVAQKIHESLGERALLRRQASPNPRRLRTFAERMANIGYDIDISTS 1019
Query: 779 GQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYT 838
SL + DD + + + M A Y G D+D HYAL PVYT
Sbjct: 1020 AALQNSLFRI-----DDAEIRKGMETLIVKAMGRAKYTVPGRAA-DSDLTHYALNLPVYT 1073
Query: 839 HFTSPLRRYPDLVVHRTLNAAL 860
HFT+P RRY D++VHR L A L
Sbjct: 1074 HFTNPSRRYADIIVHRQLEAVL 1095
>gi|189346025|ref|YP_001942554.1| ribonuclease R [Chlorobium limicola DSM 245]
gi|189340172|gb|ACD89575.1| ribonuclease R [Chlorobium limicola DSM 245]
Length = 791
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 161/470 (34%), Positives = 244/470 (51%), Gaps = 45/470 (9%)
Query: 455 QAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRN 514
QA VL + G G+ +++AI + I + F E ++ + + ++L +R D+R+
Sbjct: 269 QARVLEILGSAGDSRVEVSAIARNHGIDET-FDEELINFAGAIKEGITDDDLKNRLDIRD 327
Query: 515 FCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYM 574
+FTIDP A D DDALSIE L D + R+GVHIADVS++V + LD EA R+TSVY+
Sbjct: 328 KNVFTIDPVDAKDFDDALSIETLDDNLYRIGVHIADVSHYVPENSPLDREAMKRATSVYL 387
Query: 575 LQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEH 634
+ R IPMLP LSE+V SLNPGVDR+AFS+F + +G+V + +TVI S + +YE
Sbjct: 388 VDRVIPMLPSRLSEQVCSLNPGVDRMAFSVFITMTESGEVREHAFHKTVIHSKRRYTYED 447
Query: 635 AQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLE 694
Q+I+ GEG D ++ L ++S L+++RF G L E
Sbjct: 448 VQEIL----------LKGEG-----------DNAAELQLLEKISVQLREERFRHGGLDFE 486
Query: 695 NSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAF------PDSALL 748
+ F G P + + R + L EEFMLLAN+ AE + + F P +
Sbjct: 487 TEEVRFRLGSKGEPVEVIKKERLSSHRLIEEFMLLANRKVAEYLTKTFRERKKNPQPVIY 546
Query: 749 RRHPAPNMRKLREFEAFCSKHG--LQLDTSSSGQF--HQSLEQAREKLKDDYVLFDILIN 804
R H AP ++ F K G L+++ +G ++L Q +++ V F L+N
Sbjct: 547 RVHDAPQQERVLVLANFVRKIGYTLKINREKTGPIVSAKALRQLLQQVHGSNVEF--LVN 604
Query: 805 -YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE 863
R M A Y D + GH+ L F YTHFTSP+RRYPDL+VHR L E E
Sbjct: 605 ELVLRCMSKAIY-------TDENTGHFGLGFEHYTHFTSPIRRYPDLIVHRLL---FEYE 654
Query: 864 KLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKY 913
L + +++ K + R + I +++ + RE++ + ++Y
Sbjct: 655 NLRNRKKKITDKRLAELSEKIRVTSRISNEREKSAVEAERESIKLKQVEY 704
>gi|146418092|ref|XP_001485012.1| hypothetical protein PGUG_02741 [Meyerozyma guilliermondii ATCC
6260]
Length = 978
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 178/492 (36%), Positives = 252/492 (51%), Gaps = 43/492 (8%)
Query: 413 MVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQI 472
VVL+ + I+ R + + +V +D W S PQ H + G E +
Sbjct: 405 FVVLMDKVLPKIRIRTRKATDLLGKRIVVV-VDSWPSTSKHPQGHFVRSLGDVESAEAET 463
Query: 473 NAILYENAICCSGFSPESLSCLP--CVPWEVPQE------ELLSRKDLRNFCIFTIDPST 524
A+L E+ + FS L CLP W+VP+ +L RKDLR+ + +IDP
Sbjct: 464 EALLLEHDVEYRPFSKNVLDCLPKEGANWKVPETLNMADGQLAQRKDLRDKLVCSIDPPG 523
Query: 525 ATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPV 584
D+DDAL +L +G VGVHIADV++FV P TALD E R TSVY++ ++I MLP+
Sbjct: 524 CVDIDDALHARKLPNGNYEVGVHIADVTHFVKPNTALDQEGASRGTSVYLVDKRIDMLPM 583
Query: 585 LLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFD 644
LL + SL P VDR AFS+ W+L+ ++V+ +++I+S SYE AQ ID K
Sbjct: 584 LLGTNLCSLKPYVDRFAFSVIWELDQNAEIVNVDYMKSIIKSREAFSYEQAQLRIDDK-- 641
Query: 645 VESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFLFD 703
S N ++ +S++ L ++SK LK KR GAL L + + V +
Sbjct: 642 --SQN---------------DELTQSMRILLKLSKKLKQKRLDAGALNLASPEVKVHMDS 684
Query: 704 EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH---PAPNMRKLR 760
E P + + + N L EEFML AN + A I A+P +A+LRRH PA N L
Sbjct: 685 ETSDPGEVEIKKLLETNSLVEEFMLFANISVARKIYDAYPQTAMLRRHAPPPATNFEALN 744
Query: 761 EFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSG 819
E K G+ + SS SL++ E D Y F+ L+ +TR M A YF SG
Sbjct: 745 EM-LRVRKKGMSISLESSKALADSLDRC-EDPNDPY--FNTLLRIMSTRCMMAAEYFPSG 800
Query: 820 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR-----RMLP 874
+ ++ HY LA +YTHFTSP+RRY D+V HR L A+ E L HR ++
Sbjct: 801 SY-GYPEFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYENLDLSHRDKTKMELIV 859
Query: 875 KNNHREGVRGRF 886
KN +R +F
Sbjct: 860 KNINRRHRNAQF 871
>gi|392397436|ref|YP_006434037.1| RNAse R [Flexibacter litoralis DSM 6794]
gi|390528514|gb|AFM04244.1| RNAse R [Flexibacter litoralis DSM 6794]
Length = 797
Score = 240 bits (613), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 150/427 (35%), Positives = 222/427 (51%), Gaps = 36/427 (8%)
Query: 440 VAARIDEWNEE-SPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVP 498
V ++ +W+EE P V V G+ GE E +I+AI+ E + F + + VP
Sbjct: 255 VIVKVLKWSEEKGKNPLGEVTEVLGKVGENEAEIHAIMVEFGLPMD-FDEKLIKKAEEVP 313
Query: 499 WEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPG 558
++ +E R+D R FTIDP A D DDA+S+ L +G +GVHIADV++++ P
Sbjct: 314 DDLTDKEFKKRRDFRPILTFTIDPHDAKDFDDAISLSYLPNGNYEIGVHIADVTHYIRPN 373
Query: 559 TALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW 618
T L+ EAQ R+TSVY++ R +PMLP +S + SL P ++LAFS ++L+ G V +RW
Sbjct: 374 TLLEKEAQKRATSVYLVDRVVPMLPERISNNLCSLRPQEEKLAFSAVFELDKNGSVHNRW 433
Query: 619 IGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVS 678
G+TVI S + +YE AQ+ I+ K EG D I L +++
Sbjct: 434 YGKTVIYSDRRFTYEEAQERIETK----------EG-----------DYADEINLLNDIA 472
Query: 679 KILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVI 738
K L+ KRF GA+ E + F DE G P + R+D + L EE+MLLANK+ AE +
Sbjct: 473 KKLQAKRFKHGAISFETQEVKFQLDENGKPLGVIQKIRKDAHKLVEEYMLLANKSVAEFV 532
Query: 739 AR----AFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 794
R ++ + R H P+ KL +A G ++ F SL + E +
Sbjct: 533 YRYKNGKEKNTMIYRVHDDPDPDKLANLKAMAKSFGYDINIEPEF-FAASLAKLVEDT-E 590
Query: 795 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 854
++ L + A R M A Y GH+ LAF Y+HFTSP+RRYPD++ HR
Sbjct: 591 GKPEYETLQSLAIRSMSKAVYTTKA-------TGHFGLAFDHYSHFTSPIRRYPDMMAHR 643
Query: 855 TLNAALE 861
+ L+
Sbjct: 644 LIEKYLK 650
>gi|353241038|emb|CCA72877.1| probable DIS3 3`-5` exoribonuclease required for 3` end formation
of 5.8S rRNA [Piriformospora indica DSM 11827]
Length = 1006
Score = 240 bits (612), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 212/734 (28%), Positives = 320/734 (43%), Gaps = 142/734 (19%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEA---------------YCKIEGVQTD 203
I+ H S +N ++ G + + N +N LEA ++
Sbjct: 248 IYPEHMSSIMINAGIKAGQLQQGHFNANDYNYLEASTAPQIYSTIDTFKGTVRVAAFPKP 307
Query: 204 VLITGIAAQNRAVEGDFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKG 263
VL+ G NRA+ GD V I+V + W
Sbjct: 308 VLVVGRQNMNRAMHGDIVAIEVFPETEW-------------------------------- 335
Query: 264 KSKVDVSYEYSNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVS 323
+S D + ++ + +DD +EA + +E + E
Sbjct: 336 RSPADAVVD-------QDEALKNDDADDTEAEGGDDLEAQ---------------EEARI 373
Query: 324 SSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSR 383
+++ DG ++ S PTGR+V II+R+ W Y
Sbjct: 374 ATKLRDGSGKVKEES----------PTGRIVGIIKRN--------------WRTYVC-HL 408
Query: 384 KDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAAR 443
A + SS + + + PT P++ + + P + ++ +
Sbjct: 409 DPASLSSSSETSTSVQAVFAIPTSALLPRIRMRTRQAPQLLDQK------------ILVT 456
Query: 444 IDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEV 501
ID W+ S +P+ H + G+ G E + A+L E + F CLP W V
Sbjct: 457 IDRWDSTSRYPEGHFVRSLGKVGGKEAEQEALLVEYGVAYGAFGKAIQDCLPPEGDSWVV 516
Query: 502 P---QEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPG 558
P + R+DLR+ I +IDP D+DDAL L +G GVHIADVS+FV
Sbjct: 517 PPKGHDIWKDREDLRDVLICSIDPPGCQDIDDALHARALPNGNIEAGVHIADVSHFVHAE 576
Query: 559 TALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW 618
T +D EA R T+VY++ ++I MLP LL + SL P V+RLAFS+ W+L +V+
Sbjct: 577 TPMDSEAAARGTTVYLVDKRIDMLPSLLGTNLCSLRPHVERLAFSVIWELTPEAKIVNVR 636
Query: 619 IGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVS 678
++VI S +YE AQ D + +L + Q SI+ L ++
Sbjct: 637 FTKSVIASKSAFTYEEAQIRKDDQ-------SLKDPLTQ------------SIRLLNSLA 677
Query: 679 KILKDKRFTDGALRLENSKPVFLFD--EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 736
+ L++ R GAL L + + + E P D + + N L EEFMLLAN + A+
Sbjct: 678 RNLREGRMRAGALNLASPEVKIQMESSESSDPIDVKQKEQLETNSLVEEFMLLANISVAK 737
Query: 737 VIARAFPDSALLRRH---PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLK 793
I FP +A+LRRH P N L++ GL+LD SSSG SL+ +
Sbjct: 738 KIQETFPLTAVLRRHMPPPTTNFETLKDI--LMKIKGLKLDVSSSGALASSLDLC---VD 792
Query: 794 DDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 852
+ F+ L+ ATR M A YFCSG+ DT +GHY LA P+YTHFTSP+RRY D++V
Sbjct: 793 SNEPAFNTLVRIMATRCMLSAEYFCSGNVPRDT-FGHYGLASPIYTHFTSPIRRYADVLV 851
Query: 853 HRTLNAALEAEKLY 866
HR L+AA+ L+
Sbjct: 852 HRQLSAAINHAPLH 865
>gi|451999099|gb|EMD91562.1| hypothetical protein COCHEDRAFT_1224675 [Cochliobolus heterostrophus
C5]
Length = 1360
Score = 240 bits (612), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 188/718 (26%), Positives = 314/718 (43%), Gaps = 76/718 (10%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R +F P+ + L G + RVN NR +AY + D+ I G +NRA
Sbjct: 418 RKTLFTPYLPQATLPALLGDGQLVAGILRVNKKNRSDAYVTTTDLDADIFICGSKDRNRA 477
Query: 216 VEGDFVLIK-VDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYS 274
+EGD V ++ +D +W + + ++++ P A+ +D
Sbjct: 478 LEGDLVAVELLDVDEVWGQKREKEEKKKRKDNAD-PRGASIAVNDATTQPETGSEGGIRR 536
Query: 275 NCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAI 334
+L +DD E + ++E E N +++ + I
Sbjct: 537 RGSLRQRPTQKKNDDVEVEGQSLLLMEEEEIN-------------DELKPLYAGHIVAVI 583
Query: 335 ERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLN-VNQWFNYKGGSRKDAKKNRSSL 393
ER++ + S G +G L +Q K + + A++ +
Sbjct: 584 ERVAGQMFS---------------------GSLGLLRPSSQATKEKQEAERQAREGNTGR 622
Query: 394 SVPDRE----YIQLTPTHPKYPKMVVLVKDLP-DSIKKRLEEGDATIEMELVAARIDEWN 448
+ P+R+ + PT + P + + + P D ++K E D + A I W
Sbjct: 623 TQPERQDKPKIVWFKPTDKRVPLIAIPTEQAPRDFVEKHQEYAD-----RIFVACIKRWP 677
Query: 449 EESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVP---QEE 505
S P ++ G G+++ + +A+L +N FS + + W V +E
Sbjct: 678 ITSLHPFGTLVEQLGVMGDLKVETDALLRDNNFGPDDFSDAVIKNVGFEDWSVANDGEEA 737
Query: 506 LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEA 565
L +R+D R FTIDP+ + +LDDA+ + L DG +GVH+ D+++F+ + +D EA
Sbjct: 738 LKNRRDFRGEETFTIDPNGSKELDDAIHFKYLDDGRVEIGVHVTDIAHFIKANSLVDREA 797
Query: 566 QVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV---DRWIGRT 622
+ R T+VY++ R + MLP LS ++ LNPG +R S+ + + A V + WIG++
Sbjct: 798 KKRGTAVYLMNRTVNMLPPKLSNDICCLNPGEERYTVSVVFKADPASGKVFEDETWIGKS 857
Query: 623 VIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILK 682
VI+S KLSY+ +I G D S+ + IK L+ +S+ +
Sbjct: 858 VIKSSGKLSYDEVDSVISGNDDSVSAAR-----------------AKDIKMLHHISQKFR 900
Query: 683 DKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAF 742
RF D ++ + ++ D+ P + + + EE L N T A+ +A
Sbjct: 901 QTRFGDRVSDVKALRLMYQLDDENVPVEQNIFDSSPAHECIEELSHLVNATVAKKLAAGL 960
Query: 743 PDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDIL 802
P+ ALLRR PN R+L G +L+T SSG SL + +D L +
Sbjct: 961 PEKALLRRQAPPNPRRLMTIAERMGAIGYELNTESSGSLQNSLFEV-----EDDDLRKGM 1015
Query: 803 INYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
+ M A YF +G ++ + HYAL P YTHFT+P RRY D+VVHR L A L
Sbjct: 1016 ETLVIKSMPRAKYFIAGKLPEE-QYPHYALNLPRYTHFTNPSRRYADIVVHRQLEAVL 1072
>gi|74000899|ref|XP_535520.2| PREDICTED: DIS3 mitotic control homolog (S. cerevisiae)-like [Canis
lupus familiaris]
Length = 885
Score = 240 bits (612), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 149/404 (36%), Positives = 224/404 (55%), Gaps = 19/404 (4%)
Query: 471 QINAILYENAICC--SGFSPESLSCLPCVPWEVPQEELLSRKDLR-NFCIFTIDPSTATD 527
QI A + C SG E P PW+V EE RKDLR +F+IDP D
Sbjct: 256 QIEAFVRLQGASCKDSGSMCEMPVNTPGNPWKVSPEEERERKDLRETHLVFSIDPKGCED 315
Query: 528 LDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLS 587
+DD LS+ L++G +GVHIADV++FV P + +D EA+ R+T+ Y+ R+ MLP +LS
Sbjct: 316 VDDTLSVRTLANGSLELGVHIADVTHFVPPSSYIDTEARTRATTYYLADRRYDMLPSILS 375
Query: 588 EEVGSLNPGVDRLAFSIFWDLN-SAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 646
++ SL GVDR A S+ W+L+ ++ ++ + W GRT+IRS KL YE AQ+++DG
Sbjct: 376 ADLCSLLGGVDRYAVSVIWELDRTSYEIKNVWFGRTIIRSAYKLFYEAAQELLDGNV--- 432
Query: 647 SSNTLGEGWPQLYG------QFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVF 700
T+ E P+L Q + ++V ++ L ++++ ++ KR GAL LE +
Sbjct: 433 ---TVVEDIPELKNLDTKSRQAKLEELVWALGKLTDIARHIRAKRDRCGALELEGVEVRV 489
Query: 701 LFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLR 760
DE +D + +++ E M+LAN A I +FP ALLR+HP P+
Sbjct: 490 QLDEKKNIHDLIPKQPLEVHETVAECMILANHWVARKIWESFPHQALLRQHPPPHQEFFS 549
Query: 761 EFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGD 820
E G +DT S+ SL+ A + +D ++ +L + AT+ M A YF +G
Sbjct: 550 ELRECAKAKGFFIDTRSNKTLADSLDNAND--PNDPIVNRLLRSMATQAMSNALYFSTGS 607
Query: 821 FKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ +K
Sbjct: 608 CAEE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDK 650
>gi|429725860|ref|ZP_19260675.1| ribonuclease R [Prevotella sp. oral taxon 473 str. F0040]
gi|429148658|gb|EKX91661.1| ribonuclease R [Prevotella sp. oral taxon 473 str. F0040]
Length = 802
Score = 240 bits (612), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 159/432 (36%), Positives = 234/432 (54%), Gaps = 35/432 (8%)
Query: 442 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLS-CLPCVPWE 500
+I +W E++ P+ V+ V G+ GE + +++AIL E + + PE++ +
Sbjct: 190 VKIVDWPEDTKSPRGEVVDVLGQEGENDTEMHAILAEYGLPYT--YPENVERAADKLHPG 247
Query: 501 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 560
+ +EE+ R+D R FTIDP A D DDALSI RL+D VGVHIADVS++VL +
Sbjct: 248 ITEEEIAKREDFRQIPTFTIDPRDAKDFDDALSIRRLTDDTWEVGVHIADVSHYVLEDSV 307
Query: 561 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIG 620
+D EA R+TSVY++ R IPMLP L + SL P ++LA+S+ +++N+ DV+ +
Sbjct: 308 IDQEALSRATSVYLVDRTIPMLPERLCNYICSLRPNEEKLAYSVIFEMNNNADVLHAQVA 367
Query: 621 RTVIRSCCKLSYEHAQDIID--GKFDVESSNTLGEGWPQLYG-----QFEWSDVVRSIKS 673
+TVI S + +YE AQ II+ G+ + GE P + G Q EW+ V +
Sbjct: 368 KTVICSDRRFTYEEAQTIIERNGQASPDDLALPGE-HPAVDGSKENPQGEWAMEVLQLDH 426
Query: 674 LYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKT 733
L +K L+ KRF G++ + + F DE G P + + +D N L EEFMLLAN+T
Sbjct: 427 L---AKQLRAKRFKGGSIGFDRPEVRFEIDEKGHPISTYVKIAKDANKLVEEFMLLANRT 483
Query: 734 AAEVIA----RAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQS 784
AE +A P R H P+ K+ + F SK G ++ T S +
Sbjct: 484 VAEKVAIVPKGKQPKVLPYRIHDVPDAEKMEKLRGFVSKFGYKMRTEGSKTDVSKSLNNL 543
Query: 785 LEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPL 844
L + + K K+++V+ + A R M A Y + GHY L F YTHFTSP+
Sbjct: 544 LAEVKGK-KEEHVVEMV----ALRAMMKARYSVH-------NIGHYGLMFRHYTHFTSPI 591
Query: 845 RRYPDLVVHRTL 856
RRYPDL+VHR L
Sbjct: 592 RRYPDLMVHRLL 603
>gi|189459727|ref|ZP_03008512.1| hypothetical protein BACCOP_00355 [Bacteroides coprocola DSM 17136]
gi|189433574|gb|EDV02559.1| ribonuclease R [Bacteroides coprocola DSM 17136]
Length = 716
Score = 240 bits (612), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 153/437 (35%), Positives = 224/437 (51%), Gaps = 59/437 (13%)
Query: 441 AARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPW 499
+I EW EE+ P V+ + G+ GE +++AIL E + P+++ + +
Sbjct: 193 VVKITEWPEEAKNPFGEVIDILGKAGENTTEMHAILAEYGLPY--VYPQAVEAAAEKISA 250
Query: 500 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 559
E+ E+ R+D R+ FTIDP A D DDALSI +L G+ VGVHIADVS++V G+
Sbjct: 251 EITPEDYAEREDFRDIVTFTIDPKDAKDFDDALSIRQLKPGLWEVGVHIADVSHYVKEGS 310
Query: 560 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 619
+D EA R+TSVY++ R IPMLP L + SL P ++LA+S+ +++N ++ D I
Sbjct: 311 IIDKEAVKRATSVYLVDRTIPMLPERLCNFICSLRPDEEKLAYSVIFNMNEKAEIKDYRI 370
Query: 620 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 679
TVI+S + +YE AQ+II+ GEG D I L ++++
Sbjct: 371 RHTVIKSNRRFTYEEAQNIIE----------TGEG-----------DYKEEILQLNKLAQ 409
Query: 680 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 739
IL++KR GA+ + + F DE G P ++ N L EEFMLLAN+T AE I
Sbjct: 410 ILREKRMAAGAINFDRCEVKFEIDEKGKPLSVYFKVSKEANKLIEEFMLLANRTVAEHIG 469
Query: 740 --------RAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSS--------GQFHQ 783
+ FP R H P+ KL F ++ G ++ T S +
Sbjct: 470 KVPKNKKPKVFP----YRIHDLPDPDKLDNLSQFIARFGYKIRTGGSKTDVSKSINRLLS 525
Query: 784 SLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSP 843
+E +E+ +++ + R MQ A Y + GHY LAF YTHFTSP
Sbjct: 526 DIEGKKEQ--------NLIETVSLRAMQKARYSI-------YNIGHYGLAFDFYTHFTSP 570
Query: 844 LRRYPDLVVHRTLNAAL 860
+RRYPDL+VHR L L
Sbjct: 571 IRRYPDLMVHRLLTRYL 587
>gi|451848255|gb|EMD61561.1| hypothetical protein COCSADRAFT_96596 [Cochliobolus sativus ND90Pr]
Length = 1360
Score = 240 bits (612), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 189/720 (26%), Positives = 318/720 (44%), Gaps = 80/720 (11%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R +F P+ + L G + RVN NR +AY + D+ I G +NRA
Sbjct: 418 RKTLFTPYLPQATLPALLGDGQLVAGILRVNKKNRSDAYVTTTDLDADIFICGSKDRNRA 477
Query: 216 VEGDFVLIK-VDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYS 274
+EGD V ++ +D +W + + ++++ +G S + V+ +
Sbjct: 478 LEGDLVAVELLDVDEVWGQKREKEEKKKRKDNAD------------PRGAS-IAVNDATT 524
Query: 275 NCTLLSEKGIHHDDDSSSEAYNQEM--IEREGYNYINGHHPSTSDSTEKVSSSQQNDGMN 332
SE GI ++ +E EG + + +D + + + +
Sbjct: 525 QPETGSEGGIRRRGSLRQRPTQKKNDDVEVEGQSLLLMEEEEINDELKPLYAGHI---VA 581
Query: 333 AIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLN-VNQWFNYKGGSRKDAKKNRS 391
IER++ + S G +G L +Q K + + A++ +
Sbjct: 582 VIERVAGQMFS---------------------GSLGLLRPSSQATKEKQEAERQAREGNT 620
Query: 392 SLSVPDRE----YIQLTPTHPKYPKMVVLVKDLP-DSIKKRLEEGDATIEMELVAARIDE 446
+ P+R+ + PT + P + + + P D ++K E D + A I
Sbjct: 621 GRTQPERQDKPKIVWFKPTDKRVPLIAIPTEQAPRDFVEKHQEYAD-----RIFVACIKR 675
Query: 447 WNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEV---PQ 503
W S P ++ G G+++ + +A+L +N FS + + W V +
Sbjct: 676 WPITSLHPFGTLVEQLGVMGDLKVETDALLRDNNFGPDDFSDAVIKNVGFEDWSVVNDGE 735
Query: 504 EELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDI 563
E L +R+D R FTIDP+ + +LDDA+ + L DG +GVH+ D+++F+ + +D
Sbjct: 736 EALKNRRDFRGEETFTIDPNGSKELDDAIHFKYLDDGRVEIGVHVTDIAHFIKANSLVDR 795
Query: 564 EAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV---DRWIG 620
EA+ R T+VY++ R + MLP LS ++ LNPG +R S+ + + A V + WIG
Sbjct: 796 EAKKRGTAVYLMNRTVNMLPPKLSNDICCLNPGEERYTVSVVFKADPASGKVFEDETWIG 855
Query: 621 RTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKI 680
++VI+S KLSY+ +I G D S+ + IK L+ +S+
Sbjct: 856 KSVIKSSGKLSYDEVDSVISGNDDSVSAAR-----------------AKDIKMLHHISQK 898
Query: 681 LKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR 740
+ RF D ++ + ++ D+ P + + + EE L N T A+ +A
Sbjct: 899 FRQTRFGDRVSDVKALRLMYQLDDENVPVEQNIFDSSPAHECIEELSHLVNATVAKKLAA 958
Query: 741 AFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFD 800
P+ ALLRR PN R+L G +L+T SSG SL + +D L
Sbjct: 959 GLPEKALLRRQAPPNPRRLMTIAERMGAIGYELNTESSGSLQNSLFEV-----EDDDLRK 1013
Query: 801 ILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
+ + M A YF +G ++ + HYAL P YTHFT+P RRY D+VVHR L A L
Sbjct: 1014 GMETLVIKSMPRAKYFIAGKLPEE-QYPHYALNLPRYTHFTNPSRRYADIVVHRQLEAVL 1072
>gi|291515528|emb|CBK64738.1| RNAse R [Alistipes shahii WAL 8301]
Length = 744
Score = 239 bits (611), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 146/434 (33%), Positives = 215/434 (49%), Gaps = 37/434 (8%)
Query: 438 ELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV 497
E V RI +W S P ++ G G + ++++IL E + F PE +
Sbjct: 190 EKVVVRIADWLPGSKSPVGELVERLGMAGNNDTEMHSILAEYELPYR-FEPEIEEAAQAI 248
Query: 498 PWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLP 557
V +E+ R+D R FT+DP+ A D DDALS+ ++ DG+ VGVHIADV+++V P
Sbjct: 249 DARVTAKEIAQRRDFRGVTTFTVDPADAKDFDDALSVRKIKDGVWEVGVHIADVTHYVRP 308
Query: 558 GTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR 617
+ +D EA R TSVY++ R +PMLP LS E+ SL P L FS + LN D+++
Sbjct: 309 HSVIDDEAVERGTSVYLVDRTVPMLPERLSNELCSLRPHETSLCFSAVFTLNENLDILEE 368
Query: 618 WIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEV 677
W GRTVI S + +Y AQ+II+ G G D + +L +
Sbjct: 369 WFGRTVIHSDRRFTYAEAQEIIE----------TGRG-----------DYAEEVLTLNRL 407
Query: 678 SKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEV 737
++ L+ +RF +GA+ + + F DE G P +++ N + EEFMLLAN+ AE
Sbjct: 408 AQALRKERFRNGAISFDREEVKFRLDENGKPLGVYFKEQKESNQMIEEFMLLANRRVAEF 467
Query: 738 IARAFPDSA-------LLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQARE 790
+ +S + R H P+ KL F F + G + + L + +
Sbjct: 468 CGKRRTESGRSAERTMVYRVHDTPSEEKLDRFRQFILRFGHIFKATKGRAVAKELNKLFK 527
Query: 791 KLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDL 850
++K + + A R M A Y + GHY LAFP YTHFTSP+RRYPD+
Sbjct: 528 QIKGT-TEENAVATMAVRSMAKAYYTTD-------NIGHYGLAFPYYTHFTSPIRRYPDM 579
Query: 851 VVHRTLNAALEAEK 864
+VHR L L K
Sbjct: 580 MVHRLLARYLAGGK 593
>gi|78186405|ref|YP_374448.1| 3'-5' exoribonuclease, VacB and RNase II [Chlorobium luteolum DSM
273]
gi|78166307|gb|ABB23405.1| RNAse R [Chlorobium luteolum DSM 273]
Length = 762
Score = 239 bits (611), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 176/542 (32%), Positives = 262/542 (48%), Gaps = 84/542 (15%)
Query: 343 SYPTKRPTGRVVSIIERSPRRDGIVGFL-NVNQWFNYKGGSRKDAKKNRSSLSVPDREYI 401
S P +R G V II+R + IVG L N+ F K RK
Sbjct: 165 STPHQRCEGMVTKIIQR--KVSTIVGTLVRGNRRFTLKADERK----------------- 205
Query: 402 QLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHV 461
P++++ +K+ + ++G + EL ++++E Q VL +
Sbjct: 206 -------ILPEIIISIKNAAKA-----KDGQKVMVGEL------DFSKEGAI-QGKVLEI 246
Query: 462 FGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTID 521
G G+ +++AI I + F E + + V ++L R D+R+ +FTID
Sbjct: 247 LGTAGDSAVEVSAIARSKGIDET-FDKEIVKAASAMKMGVTDKDLQERLDVRDKVLFTID 305
Query: 522 PSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPM 581
P A D DDALS+E L +G+ ++GVHIADVS++V + LD EA R+TSVY++ R IPM
Sbjct: 306 PVDAKDFDDALSVEPLENGLWKIGVHIADVSHYVTEDSPLDKEALKRATSVYLVDRVIPM 365
Query: 582 LPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDG 641
LP LSE++ SLNPGVDR+AFS+F+ + G V +TVI S + +YE Q+I++
Sbjct: 366 LPSRLSEDICSLNPGVDRMAFSVFFTMTEDGKVQKHEFHKTVIHSKRRFTYEDVQEILNN 425
Query: 642 KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFL 701
K D + ++ L ++S +L+++RF G L E + F
Sbjct: 426 K---------------------KGDYLMELQLLEKISVLLREERFRHGGLDFETEEVRFK 464
Query: 702 FDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAF------PDSALLRRHPAPN 755
+ G P + + R + L EEFMLLAN+ AE + + F P + R H +P
Sbjct: 465 LGKKGEPLEVMKKERLGSHRLIEEFMLLANRKVAEFLTKTFKEGKKVPQPVIYRVHDSPQ 524
Query: 756 MRKLREFEAFCSKHG--LQLDTSSSGQF--HQSLEQAREKLKDDYVLFDILIN-YATRPM 810
++ F K G L+++ G +SL + +K+ V F L+N R M
Sbjct: 525 QERVIILANFVKKIGYDLKINKGKDGPIVSAKSLRELLQKVHGTNVEF--LVNELVLRCM 582
Query: 811 QLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR 870
A Y D GHY L F YTHFTSP+RRYPDL+VHR L E E K R
Sbjct: 583 SKAVYTGEND-------GHYGLGFEHYTHFTSPIRRYPDLIVHRLL---FEYEAFRKKRR 632
Query: 871 RM 872
+M
Sbjct: 633 KM 634
>gi|255728591|ref|XP_002549221.1| exosome complex exonuclease RRP44 [Candida tropicalis MYA-3404]
gi|240133537|gb|EER33093.1| exosome complex exonuclease RRP44 [Candida tropicalis MYA-3404]
Length = 989
Score = 239 bits (611), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 212/747 (28%), Positives = 338/747 (45%), Gaps = 129/747 (17%)
Query: 160 FAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEGD 219
F ++S + ++ G ++ + ++++N L+ + + +LI G NRA D
Sbjct: 246 FPEYYSNSRIMAGIKNGTLYQGILNISSYNYLQGEVSVPAFKKPLLIQGSKNLNRAFNSD 305
Query: 220 FVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCTLL 279
V+++ L K K +++I+E+ + N + DI
Sbjct: 306 SVIVE-----LLPKDKWKEPSTTIIEEETIGANDNAGNDDI------------------- 341
Query: 280 SEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSA 339
D+ + S ++E I + KV+SS ++ +RL
Sbjct: 342 -----EEDEVTQSVVSDKERI-------------ILAQEAMKVTSSNNDE-----KRL-- 376
Query: 340 MISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDR 398
+PT ++V I+ RS W Y G + + ++ +
Sbjct: 377 --------QPTAKIVGIMRRS--------------WRYYVGQIAPSSVNIDETTGNASKN 414
Query: 399 EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHV 458
++ L PK PK+ + + + + +R + +D W S +P H
Sbjct: 415 CFVILM--DPKLPKIRIRTRKAKEYLGQR------------IVVVVDSWPINSRYPNGHF 460
Query: 459 LHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP--CVPWEVPQE-------ELLSR 509
+ G E + A+L E+ + FS L CLP W VPQ+ +L R
Sbjct: 461 VRALGAIESAEAETEALLLEHDVEYRPFSKNVLDCLPKEGDNWVVPQDLENTDDVQLQKR 520
Query: 510 KDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRS 569
DLR+ + +IDP D+DDAL ++L +G VGVHIADV++FV P T+LD E R
Sbjct: 521 VDLRDKLVCSIDPPNCVDIDDALHAKQLPNGNYEVGVHIADVTHFVKPNTSLDQEGASRG 580
Query: 570 TSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCK 629
TSVY++ ++I MLP LL + SL P V+R AFS+ W+++ ++V+ +++I+S
Sbjct: 581 TSVYLVDKRIDMLPQLLGTNLCSLKPFVERFAFSVIWEVDEDANIVNVNYMKSIIKSRQA 640
Query: 630 LSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDG 689
SYE AQ ID P + ++ S++ L ++SK LK KR G
Sbjct: 641 FSYEQAQMRIDD--------------PN-----QQDELTNSMRILLKLSKKLKQKRLDAG 681
Query: 690 ALRLENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALL 748
AL L + + V + E P + + + N L EEFML AN + A I A+P +A+L
Sbjct: 682 ALNLASPEVKVHMDSETSDPQEVEIKKLLETNSLVEEFMLFANISVARKIYDAYPQTAML 741
Query: 749 RRH---PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN- 804
RRH PA N L + K+G+ + SS SL++ + KD Y F+ L+
Sbjct: 742 RRHAPPPATNFETLNDM-LNVRKNGMSISLESSKALADSLDRCVDS-KDPY--FNTLVRI 797
Query: 805 YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 864
+TR M A YF SG + ++ HY LA +YTHFTSP+RRY D+V HR L A+ E
Sbjct: 798 MSTRCMMAAEYFPSGSY-GYPEFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYET 856
Query: 865 LYWKHR-----RMLPKNNHREGVRGRF 886
L HR M+ KN +R +F
Sbjct: 857 LDLSHRDKSKMEMIVKNINRRHRNAQF 883
>gi|212542579|ref|XP_002151444.1| cell wall biogenesis protein phosphatase Ssd1, putative [Talaromyces
marneffei ATCC 18224]
gi|210066351|gb|EEA20444.1| cell wall biogenesis protein phosphatase Ssd1, putative [Talaromyces
marneffei ATCC 18224]
Length = 1339
Score = 239 bits (611), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 196/724 (27%), Positives = 319/724 (44%), Gaps = 84/724 (11%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R +F P+ + L G + RVN NR +AY + D+ I G +NRA
Sbjct: 393 RKTLFTPYLPQANLPALLSNGQLVAGILRVNKKNRSDAYVTCTELDADIFICGSKDRNRA 452
Query: 216 VEGDFVLIKV-DRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYS 274
+EGDFV +++ D +W++ + DI +S +S
Sbjct: 453 LEGDFVAVELLDVDEVWSQKREKEEKKKR--------------KDITDSRSGDKLSRS-- 496
Query: 275 NCTLLSEKGIHHDDDSSSEAYNQEM-----IEREGYNYINGHHPSTSDSTEKVSSSQQND 329
DS + NQ++ I R G T+K + + +
Sbjct: 497 --------------DSGANGENQQVGPDGSIRRRGS--------LRQRPTQKKNDDVEVE 534
Query: 330 GMNAIERLSAMISSYPTKRPTGRVVSIIERSPRR--DGIVGFLNVNQWFNYKGGSRKDAK 387
G + + IS G +V++IER + G +G L + + + A
Sbjct: 535 GQSLLLVEEDEISDEQKPLYAGHIVAVIERVAGQMFSGTLGLLRPSSQATKEKQEAERAA 594
Query: 388 KNRSSLSVPDRE-----YIQLTPTHPKYPKMVVLVKDLP-DSIKKRLEEGDATIEMELVA 441
++ DR+ + PT + P + + + P D ++K + + +
Sbjct: 595 RDGGHGRQHDRQQDKPKIVWFKPTDKRVPLIAIPTEQAPRDFVEKHQDYAN-----RIFV 649
Query: 442 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEV 501
A I W S P ++ G G+++ + +A+L +N FS L + W V
Sbjct: 650 ACIKRWPITSLHPFGTLVEQLGEMGDLKVETDALLRDNNFAADEFSEAVLKNVGWEDWTV 709
Query: 502 PQEE---LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPG 558
E +R+DLR+ FTIDP+ +LDDA+ I++L DG +G+H+ADV++FV
Sbjct: 710 ASEGDALFTNRRDLRDETTFTIDPTGTKELDDAIHIKKLGDGKVEIGIHVADVAHFVKAN 769
Query: 559 TALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR- 617
+ +D EA+ R T V+++ R + MLP LS EV SL PG +RL S+ + +++ VD
Sbjct: 770 SLVDREAKKRGTGVHLMTRVVNMLPPRLSNEVCSLVPGQERLTVSVVFQVDTVTGAVDDD 829
Query: 618 -WIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 676
WIG++VI+S KLSY+ I+G G G P E + I+ L
Sbjct: 830 VWIGKSVIKSSGKLSYDDVNSAING----------GTGSP-----LEGVN-ADDIRLLGA 873
Query: 677 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 736
++ K+ RF + + + ++ D+ P + + + + EE AN A
Sbjct: 874 ITTKFKEARFGNRTTNIPAMRLIYQLDDENMPVELNIFDSSPAHEVIEELNYKANFFVAR 933
Query: 737 VIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDY 796
+ A P+ A LRR PN R+L+ F ++ G +D SSSG SL + + D
Sbjct: 934 KLFAAMPEKAFLRRQAVPNPRRLQAFVDRVNRLGYDIDPSSSGSLQASLFKVQ-----DV 988
Query: 797 VLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTL 856
L + + MQ A Y+ +G+ + HYAL P+Y HFTSP RRY D++VHR L
Sbjct: 989 DLRKGMETILIKAMQRAKYYVAGNVT-EAQRQHYALNLPLYAHFTSPTRRYADVIVHRQL 1047
Query: 857 NAAL 860
+A L
Sbjct: 1048 DAVL 1051
>gi|399217299|emb|CCF73986.1| unnamed protein product [Babesia microti strain RI]
Length = 893
Score = 239 bits (611), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 158/450 (35%), Positives = 232/450 (51%), Gaps = 43/450 (9%)
Query: 423 SIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAIC 482
+IK R+ + +E + + +I +W +S P + + + G G V+ + AIL EN+I
Sbjct: 375 NIKTRMSK---ELEGKRITVKIADWPADSKRPNGYWVRILGDIGHVDVETWAILIENSIT 431
Query: 483 CSGFSPESLSCLPCVPWEV-PQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGI 541
FS + LP W PQ + D ++DP TD+DDALS +++ + +
Sbjct: 432 VDEFSDSAHKELPLSSWIAEPQSGRIEWTD----TTVSVDPPGCTDIDDALSYKKIENNL 487
Query: 542 SRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLA 601
R+GVHIADVS+FV G+ALD+EA R +VY++ R+ MLP LL+ + SL V R A
Sbjct: 488 -RIGVHIADVSHFVKDGSALDMEASKRCNTVYLVDRRHEMLPELLTSNICSLRSNVHRYA 546
Query: 602 FSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQ 661
FS+ W ++ G+++D +++I S L+YE A II G V
Sbjct: 547 FSVIWTMDLEGNILDTKFTKSIICSSASLTYEQAHQIIQGHISVS--------------- 591
Query: 662 FEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGT-----PYDSVLSGR 716
S+V S+ L E+S L+ KR GAL L +++ F +DE PY +
Sbjct: 592 ---SEVKESLTGLLEISAKLRQKRIEKGALELASAEVSFDYDESSQIRGLRPYKLYPT-- 646
Query: 717 EDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGL-QLDT 775
N + EEFMLLAN + A+ + FP ++RRHP P + KL E G QL
Sbjct: 647 ---NQMVEEFMLLANTSVAKKLTNTFP-CTIIRRHPLPQLDKLEELNNTLKSCGFGQLRY 702
Query: 776 SSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFP 835
++S + ++SL+ K + IL +TR M A Y S D +W HY L
Sbjct: 703 NNSKELNESLQNISRKHPHIERILRIL---STRCMSQAVYSNSKDVP-RLEWHHYGLCVD 758
Query: 836 VYTHFTSPLRRYPDLVVHRTLNAALEAEKL 865
VYTHFTSP+RRY D++VHR L AALE +
Sbjct: 759 VYTHFTSPIRRYADILVHRLLEAALEISTI 788
>gi|406025405|ref|YP_006705706.1| ribonuclease R [Cardinium endosymbiont cEper1 of Encarsia
pergandiella]
gi|404433004|emb|CCM10286.1| Ribonuclease R [Cardinium endosymbiont cEper1 of Encarsia
pergandiella]
Length = 697
Score = 239 bits (609), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 150/430 (34%), Positives = 224/430 (52%), Gaps = 47/430 (10%)
Query: 451 SPFPQAH------VLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQE 504
+ FP H V+ G+ G E +++AI+ E + GF + + +P + ++
Sbjct: 180 TSFPNTHKQLTGTVVEHLGQAGLHEVEMHAIMAEFGLK-EGFPDHVVESIKNIPTVITEK 238
Query: 505 ELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIE 564
E+ R+D+R+ FTIDP A D DDALS + L++G +VG+HIADVS++V+P + LD E
Sbjct: 239 EITKRRDMRHIPTFTIDPVDAKDFDDALSYQPLANGHHQVGIHIADVSHYVIPDSLLDKE 298
Query: 565 AQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVI 624
A R+TSVY++ R IPMLP +LS + SL P +L FS ++L++ G V D+W+G T+I
Sbjct: 299 AYARNTSVYLVDRCIPMLPEILSNGLCSLRPNETKLTFSAIFELDAQGKVYDKWLGETII 358
Query: 625 RSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDK 684
S + SYE AQ ID F+ D +++ L ++K + K
Sbjct: 359 YSDKRFSYEEAQMAID---------------------FQRGDFYQALTVLNHLAKQIHAK 397
Query: 685 RFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA----- 739
R GA+ E VF D G P R D + L EEFMLLAN+ A A
Sbjct: 398 RSQKGAINFETRSLVFDLDTNGKPLKVTSKCRTDAHKLIEEFMLLANQEVATYAAYLKQK 457
Query: 740 -RAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFH--QSLEQAREKLKDDY 796
+ + R H P+ KL +F F ++ G +++ + + + LE+A + K+
Sbjct: 458 QENLRPTFIYRTHGYPDPDKLNDFFLFVNQLGYKINRAKTSIYKAMHDLEKAIQGKKEA- 516
Query: 797 VLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTL 856
I+ + A R M A Y D H+ALAF YTHFTSP+RRYPD++VHR L
Sbjct: 517 ---PIIQSLAIRSMAKALYTTKPD-------PHFALAFAHYTHFTSPIRRYPDVLVHRLL 566
Query: 857 NAALEAEKLY 866
L+ E +Y
Sbjct: 567 KQYLKGEHIY 576
>gi|393785787|ref|ZP_10373933.1| ribonuclease R [Bacteroides nordii CL02T12C05]
gi|392661406|gb|EIY54992.1| ribonuclease R [Bacteroides nordii CL02T12C05]
Length = 713
Score = 239 bits (609), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 149/432 (34%), Positives = 226/432 (52%), Gaps = 45/432 (10%)
Query: 441 AARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPW 499
++ EW +++ P VL + G+ G+ +++AIL E + P+++ +P
Sbjct: 192 VVKVIEWPDKAKNPIGQVLDILGKAGDNTTEMHAILAEFGLPY--VYPQAVEKAADKIPA 249
Query: 500 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 559
E+ +EE+ R+D R FTIDP A D DDALSI +L D + VGVHIADV+++V G
Sbjct: 250 EISEEEIAKREDFRKVTTFTIDPKDAKDFDDALSIRKLKDNLWEVGVHIADVTHYVKEGG 309
Query: 560 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 619
+D EA+ R+TSVY++ R IPMLP L + SL P ++LAFS+ +D+ G+V + I
Sbjct: 310 IIDKEAEKRATSVYLVDRTIPMLPERLCNFLCSLRPHEEKLAFSVIFDITEKGEVKNSRI 369
Query: 620 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 679
T+I S + +YE AQ II+ + EG D + + ++K
Sbjct: 370 VHTIIYSDRRFTYEEAQQIIETQ----------EG-----------DFKEEVLMMDTIAK 408
Query: 680 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 739
L+++RF GA+ + + F DE G P +D N L EEFMLLAN+T AE I
Sbjct: 409 ALRERRFAAGAINFDRYEVKFEIDEKGKPVSVYFKESKDANKLVEEFMLLANRTVAEKIG 468
Query: 740 RA--FPDSALL--RRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQARE 790
R + +L R H P+ KL F ++ G +L TS S + L+ +
Sbjct: 469 RVPKGKKAKVLPYRIHDLPDPEKLDNLSQFIARFGYKLRTSGTKTDISKSINHLLDDIQG 528
Query: 791 KLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDL 850
K ++ +++ + R MQ A Y + GHY LAF YTHFTSP+RR+PD+
Sbjct: 529 KKEE-----NLIETVSIRAMQKARYSTH-------NIGHYGLAFDYYTHFTSPIRRFPDM 576
Query: 851 VVHRTLNAALEA 862
+VHR + L+
Sbjct: 577 MVHRLVTKYLDG 588
>gi|345567046|gb|EGX49984.1| hypothetical protein AOL_s00076g625 [Arthrobotrys oligospora ATCC
24927]
Length = 975
Score = 239 bits (609), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 174/528 (32%), Positives = 250/528 (47%), Gaps = 64/528 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 407
+PT ++V +++R+ R VG ++ N K G + + + P
Sbjct: 379 QPTAKIVGVLKRNWR--SYVGHIDPNSVNRAKSGGQ---------------QVVFFRPLD 421
Query: 408 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 467
K P++ V + + +R + ID W+ S FP H + G
Sbjct: 422 KKIPRIRVFTRQATQLLGQR------------IVVNIDTWDRTSRFPVGHFVRALGELES 469
Query: 468 VEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEELLS---RKDLRNFCIFTIDP 522
E + A+L E + F L CLP W VP++ R DLR+ + +IDP
Sbjct: 470 KEAETEALLLEYDVQYRPFPKAVLDCLPSEGHDWIVPEKGTSGWEKRVDLRDLLVCSIDP 529
Query: 523 STATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPML 582
D+DDAL L +G GVHIADVS+FV P A+D EA R T+VY++ ++I ML
Sbjct: 530 PGCQDIDDALHARLLPNGNYEAGVHIADVSHFVKPNNAMDDEAASRGTTVYLVDKRIDML 589
Query: 583 PVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
P LL ++ SL P V+R AFS+ W++ +V+ ++VI+S +Y+ AQ ID K
Sbjct: 590 PPLLGTDLCSLKPYVERYAFSVIWEMTPDAKIVNTKFTKSVIKSREAFAYKAAQMRIDDK 649
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFL 701
++ L EG ++ L +SK LK R GAL L + + + +
Sbjct: 650 ---SQTDPLTEG----------------MRILLMLSKKLKQARMDAGALNLASPEVKIHM 690
Query: 702 FDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH---PAPNMRK 758
E P + + N L EEFML AN + A I AFP +A+LRRH PA N
Sbjct: 691 ESETSDPASIEVKELLETNSLVEEFMLCANISVARKIYEAFPQTAMLRRHGAPPATNFDD 750
Query: 759 LREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFC 817
LR ++ GL L SS SL+ + F+ L+ ATR M A YF
Sbjct: 751 LR--SQLRARKGLDLRVESSKALADSLDGC---VDPQEAYFNTLVRIIATRCMLPAEYFS 805
Query: 818 SGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 865
SG + ++ HY LA +YTHFTSP+RRY DL HR L AA+E E L
Sbjct: 806 SGT-QAYPEFRHYGLATDIYTHFTSPIRRYADLAAHRQLAAAIEYEAL 852
Score = 42.4 bits (98), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 38/75 (50%)
Query: 159 IFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEG 218
++A ++S+ +N + G + + + +N LE + +LI G+ NRA++G
Sbjct: 253 VYAEYFSLPKMNTGVRNGTLHQGTFHTSTYNSLEGTVGVPSFDKHLLIVGLENMNRAIDG 312
Query: 219 DFVLIKVDRLSLWAK 233
D V++++ W K
Sbjct: 313 DQVVVELLPQDQWKK 327
>gi|304382968|ref|ZP_07365449.1| ribonuclease R [Prevotella marshii DSM 16973]
gi|304335887|gb|EFM02136.1| ribonuclease R [Prevotella marshii DSM 16973]
Length = 732
Score = 239 bits (609), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 159/442 (35%), Positives = 237/442 (53%), Gaps = 27/442 (6%)
Query: 424 IKKRLEEGDATIEMELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAILYENAIC 482
I KR +G T + +V +I +W ES V+ V G G+ + ++N IL + +
Sbjct: 176 IPKRRLKGGHTGDKAVV--KITQWPGRESKNLVGEVVDVLGASGDNDVEMNTILAQYGLP 233
Query: 483 CSGFSPESLS-CLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGI 541
P+++ + E+ + +L R+D R+ TIDP A D DDALSI+RL G+
Sbjct: 234 YK--YPKAVEEAAEKISGEITETDLREREDFRDTFTCTIDPHDAKDFDDALSIKRLDKGL 291
Query: 542 SRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLA 601
+VGVHIADVS++V G+ +D EAQ R+TSVY++ R IPMLP L + SL P ++LA
Sbjct: 292 WQVGVHIADVSHYVAEGSIIDREAQKRATSVYLVDRTIPMLPERLCNFICSLRPDEEKLA 351
Query: 602 FSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQ 661
+S+ ++L+ D+ + TVIRS + +YE Q I++ D + G+ P
Sbjct: 352 YSVIFNLDDNADIKTWRLAHTVIRSNRRYAYEEVQQILE---DNGVKDGTGQPAPPAPKG 408
Query: 662 FEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNF 721
+ ++ +L ++K L++KRF GA++ + + F D+ G P + +D N
Sbjct: 409 GYRGENAEALITLDRLAKHLRNKRFKGGAVKFDREELHFDIDKTGKPVRAYFKMSKDANK 468
Query: 722 LFEEFMLLANKTAAE---VIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSS 778
L EEFMLLANKT AE ++ + P + R H AP+ KL F K G +L T+ +
Sbjct: 469 LIEEFMLLANKTVAESVGMVKKGKPKTLPYRIHDAPDPTKLETLRQFIVKFGYKLKTAGT 528
Query: 779 -GQFHQSLEQAREKLKDDYVLFD---ILINYATRPMQLASYFCSGDFKDDTDWGHYALAF 834
G+ +SL KL DD + ++ A R M A Y + GHY LAF
Sbjct: 529 KGEVSRSL----NKLLDDVQGRNEQKLIETVALRAMMKAKYSVH-------NIGHYGLAF 577
Query: 835 PVYTHFTSPLRRYPDLVVHRTL 856
P YTHFTSP+RRYPD +VHR L
Sbjct: 578 PYYTHFTSPIRRYPDTLVHRLL 599
>gi|392969383|ref|ZP_10334798.1| ribonuclease R [Fibrisoma limi BUZ 3]
gi|387841577|emb|CCH56856.1| ribonuclease R [Fibrisoma limi BUZ 3]
Length = 811
Score = 238 bits (608), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 183/543 (33%), Positives = 259/543 (47%), Gaps = 100/543 (18%)
Query: 342 SSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVP----- 396
SS +R G+V ++ER R IVG + V W Y G D+KK + +P
Sbjct: 168 SSNRGRRTEGKVAEVVERG--RTEIVGRIEV--WPTY-GFVVPDSKKLYEDIYIPKEKLG 222
Query: 397 -----DREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEES 451
D+ I+LT KYP P + R E
Sbjct: 223 DANDGDKVIIRLT----KYPD--------PRGNRGRFE---------------------- 248
Query: 452 PFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKD 511
V+ V G G+ +++AIL E + + F E + + + +L R+D
Sbjct: 249 ----GEVVTVLGLAGQNNTEMHAILAEFGLPIT-FPAEVEQEAEAISAVLTETDLKGRRD 303
Query: 512 LRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTS 571
+R FTIDP A D DDALS++ L +G +GVHIADV+++V PGT L+ EA R+TS
Sbjct: 304 IREVTTFTIDPVDAKDFDDALSVQILDNGHFEIGVHIADVTHYVKPGTQLEEEAFRRATS 363
Query: 572 VYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLS 631
VY++ R +PMLP LS + SL P D+L FS +++ VV W GRTVI S + S
Sbjct: 364 VYLVDRVVPMLPEKLSNNLCSLRPNEDKLTFSAVFEMTPEAKVVKEWFGRTVIHSNRRFS 423
Query: 632 YEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGAL 691
YE AQ+I+ NT G+G D + ++ L E++ L+D RF +GA+
Sbjct: 424 YEEAQEIL---------NT-GQG-----------DYLEELRLLNELAYKLRDVRFKNGAI 462
Query: 692 RLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR----AFPDSAL 747
E + F DE G P R+D N L EEFMLLANK AE + ++ +
Sbjct: 463 NFETVEVRFKLDENGVPLSVYPKIRQDTNKLIEEFMLLANKRVAEFVHSLSKPGQENTMV 522
Query: 748 LRRHPAPNMRKLREFEAFCSKHG--LQLD----TSSSGQFHQSLEQAREKLKDDYVLFDI 801
R H P+ KL++F F + G L+LD + S +F S+E E+ ++
Sbjct: 523 YRIHEGPDEAKLQQFADFAGRLGYKLKLDDEHLSGSMNRFMDSIEGKPEQ--------NM 574
Query: 802 LINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 861
L A R M A Y D GH+ LAF Y+HFTSP+RRYPD++ HR L L+
Sbjct: 575 LQQLAVRTMSKARYSTE-------DLGHFGLAFRRYSHFTSPIRRYPDMMAHRLLQHYLD 627
Query: 862 AEK 864
K
Sbjct: 628 KGK 630
>gi|430812952|emb|CCJ29669.1| unnamed protein product [Pneumocystis jirovecii]
Length = 992
Score = 238 bits (608), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 193/722 (26%), Positives = 331/722 (45%), Gaps = 127/722 (17%)
Query: 153 SEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQ 212
++ R ++ ++ ++ E ++ G ++ + VN +N LEA + + +++ G
Sbjct: 240 NKKRIFLYPEYYPYSSILENIKMGKLYQGTFNVNPYNFLEANVLVPNFEKPLIVFGKENM 299
Query: 213 NRAVEGDFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYE 272
NRA+ GD IV LP E +
Sbjct: 300 NRAIHGD-----------------------IVAVEVLPKE-----------------EWR 319
Query: 273 YSNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMN 332
++ ++ + D+++ + + +++ Y I+ ++ + +N+ M+
Sbjct: 320 APMSKIIEQEALTKDENAEVNESEEVITQKDQYEIIDEYY------------ALKNERMD 367
Query: 333 AIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSS 392
L+ + PT +VV II+R+ W Y G + + S
Sbjct: 368 ----LNKIF-------PTAKVVGIIKRN--------------WKTYVG------QIDPES 396
Query: 393 LSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESP 452
+ + ++ +Q T + + K +P I+ + +G + +++ ID W +S
Sbjct: 397 VVISNKTRVQQTVF------FISVDKRIP-KIRIKTRQGPILLNQKILV-NIDTWERDSR 448
Query: 453 FPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQ----EEL 506
+P H +H G+ + + A+L + I S F L CLP WE+
Sbjct: 449 YPSGHFVHALGKIDVDDTETEALLIQYDIEYSPFPKCVLDCLPPEGDKWEISSAMSSNNW 508
Query: 507 LSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQ 566
RKDLR+ I +IDP D+DDAL + L++ VGVH+ADVS+FV P T++D EA
Sbjct: 509 EKRKDLRHLPICSIDPPGCVDIDDALHVRVLANKNFEVGVHVADVSHFVNPNTSIDAEAS 568
Query: 567 VRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRS 626
R T+VY+L ++I MLP LL + SL PG +RLAFSI +++ +++ +++I+S
Sbjct: 569 KRGTTVYLLDKRIDMLPGLLGTNLCSLKPGFERLAFSIIFEITPEIEIIKTEFMKSIIKS 628
Query: 627 CCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRF 686
+YE+AQ ID K F+ ++ S++ L +SK L+ KR+
Sbjct: 629 RSAFTYENAQLQIDNK-------------------FQNDELTSSMRILLMLSKKLRQKRY 669
Query: 687 TDGALRLENSKPVFLFDEYGTPYDSVLSGREDL---NFLFEEFMLLANKTAAEVIARAFP 743
+GAL L S P + D + + L N L EEFMLLAN A I +P
Sbjct: 670 DNGALNL--SSPEVRLEIGNETSDKITLESKKLYETNTLVEEFMLLANIAVARKIYEVYP 727
Query: 744 DSALLRRHPAPNMRKLREFEAFCS-KHGLQLDTSSSGQFHQSLEQAREKLKDDY-VLFDI 801
D A+LRRH AP + + + L+ +SS SL + ++ + + L I
Sbjct: 728 DFAILRRHAAPPKENFETLQNVLKIRRNMILNINSSKDLADSLNKCIDQNEPYFNTLLRI 787
Query: 802 LINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 861
++ TR M A YF +G+ + +++ HY LA +YTH+TSP+RRY D++ HR L AA+
Sbjct: 788 MV---TRCMLSAEYFFAGNC-NYSEFKHYGLAVDIYTHWTSPIRRYADIMTHRQLAAAIG 843
Query: 862 AE 863
E
Sbjct: 844 YE 845
>gi|409122693|ref|ZP_11222088.1| ribonuclease R [Gillisia sp. CBA3202]
Length = 731
Score = 238 bits (608), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 143/427 (33%), Positives = 222/427 (51%), Gaps = 18/427 (4%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 499
V ++EW E++ P + V G+ GE +++AIL + + F E +
Sbjct: 189 VVVTMEEWPEKADSPFGSIKQVLGKPGEHHTEMHAILAQYGLPHE-FPKEIEDFANNIDT 247
Query: 500 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 559
+ + E+ R+DLR FTIDP A D DDALS ++L +G +G+HIADVS+++ PGT
Sbjct: 248 SIQENEIKKRRDLRETLTFTIDPKDAKDFDDALSFKKLENGNFEIGIHIADVSHYLQPGT 307
Query: 560 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 619
LD EA R+TSVY++ R +PMLP +LS SL P ++ FS +++++ G V + W
Sbjct: 308 ILDDEAYERATSVYLVDRVVPMLPEVLSNNACSLRPNEEKYTFSAVFEIDAKGYVKNEWF 367
Query: 620 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 679
GRTV S + +YE AQ II + E E + G +VV ++ +L +++K
Sbjct: 368 GRTVTLSDERFAYEEAQHII----ETEKGIIPTEISIRENGYNVGDNVVDAVVTLNDLAK 423
Query: 680 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 739
++ +R DGA+ + + F +E P ++ N L EEFMLLANK A+ I
Sbjct: 424 QMRVRRMADGAISFDKVEVKFNLNEENEPVGVFFKTSQEANKLIEEFMLLANKRVAQFIG 483
Query: 740 RAFPDSALLRR-HPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLK--DDY 796
+ P + R H P+ KL + SK G +++ SL + ++ +
Sbjct: 484 KQTPKKTFVYRCHDEPDDSKLNTLQTVISKFGYKINLKDKKSISNSLNELLSDVQGTKEQ 543
Query: 797 VLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTL 856
L D L R M A Y + GHY L+F Y+HFTSP+RRYPD++ HR L
Sbjct: 544 NLVDTL---TIRTMSKAYYSTK-------NIGHYGLSFDYYSHFTSPIRRYPDVMTHRLL 593
Query: 857 NAALEAE 863
+ L+++
Sbjct: 594 QSYLDSK 600
>gi|225679606|gb|EEH17890.1| cell wall biogenesis protein phosphatase Ssd1 [Paracoccidioides
brasiliensis Pb03]
Length = 1374
Score = 238 bits (608), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 166/528 (31%), Positives = 258/528 (48%), Gaps = 49/528 (9%)
Query: 351 GRVVSIIERSPRR--DGIVGFLN-VNQWFNYKGGSRKDAKKNRSSLSVPDRE-----YIQ 402
G VV++IER + G +G L +Q K + + A+ S DR+ +
Sbjct: 588 GHVVAVIERVAGQMFSGSLGVLRPSSQATKEKQEAERQARDGSHSRHHHDRQQEKPKIVW 647
Query: 403 LTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVF 462
PT + P + + + P + E A + A I W S P ++
Sbjct: 648 FKPTDKRVPLIAIPTEQAP----RDFVEKHADYANNIFVACIKRWPITSLHPFGTLVEQL 703
Query: 463 GRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW--EVPQEELLS-RKDLRNFCIFT 519
G G ++ + +A+L +N FS L + W EV E LLS R+D R FT
Sbjct: 704 GAMGNLKVETDALLRDNNFASDEFSDAVLKNVGFENWSVEVEGEALLSSRRDFRYETTFT 763
Query: 520 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 579
IDP+ +LDDA+ ++ LSDG +G+H+ADV++F+ + +D EA+ R T VY++ R +
Sbjct: 764 IDPNGTKELDDAIHVKTLSDGKVEIGIHVADVAHFIKGNSLVDREAKKRGTGVYLMNRVV 823
Query: 580 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV--DRWIGRTVIRSCCKLSYEHAQD 637
MLP LS E+ SL PG +RL S+ + +N A +V + WIG+ VI+S KL+Y+
Sbjct: 824 NMLPPRLSTEICSLLPGEERLTVSVVFQVNPATGIVEGEPWIGKAVIKSSGKLTYDEVDA 883
Query: 638 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 697
++ G D+ QL+G V IK+L +++ K+ RF + + R+ + +
Sbjct: 884 VLGGNSDI-----------QLHGV-----TVDDIKTLNDIASKFKEARFGNRSTRIPSLR 927
Query: 698 PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMR 757
++ D+ P + + + L EE AN AE + A P+ ALLRR PN R
Sbjct: 928 LLYQLDDENVPVEHNIFETTPAHELIEELSHKANTFVAEKLVSALPEKALLRRQAPPNFR 987
Query: 758 KLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYAT-----RPMQL 812
+L+ F ++ G +D++S G SL + + D+ I + MQ
Sbjct: 988 RLQTFVDRMTRLGYDIDSTSRGTLQTSL----------FKIGDVEIRKGMETLLLKAMQR 1037
Query: 813 ASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
A Y+ +G D+ HY L P+YTHFTSP RRY D+VVHR L A L
Sbjct: 1038 AKYYVAGSVTDEQRQ-HYVLNLPLYTHFTSPSRRYADIVVHRQLEAVL 1084
>gi|319900672|ref|YP_004160400.1| RNAse R [Bacteroides helcogenes P 36-108]
gi|319415703|gb|ADV42814.1| RNAse R [Bacteroides helcogenes P 36-108]
Length = 717
Score = 238 bits (608), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 147/430 (34%), Positives = 226/430 (52%), Gaps = 45/430 (10%)
Query: 442 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWE 500
++ EW +++ P V+ + GR G+ +++AIL E + P ++ + + E
Sbjct: 196 VKVVEWPDKAKNPIGQVIDILGRTGDNTTEMHAILAEFGLPY--VYPSAVENAADKISDE 253
Query: 501 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 560
+P EE+ R+D R+ FTIDP A D DDALSI +L +G+ VGVHIADV+++V G
Sbjct: 254 IPAEEIAKREDFRSVTTFTIDPKDAKDFDDALSIRKLKEGLWEVGVHIADVTHYVKEGGI 313
Query: 561 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIG 620
+D EA+ R+TSVY++ R IPMLP L + SL P ++LA+S+ +++ G+V + +
Sbjct: 314 IDKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPDEEKLAYSVIFEMTEKGEVNNSRVV 373
Query: 621 RTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKI 680
TVI+S + +YE AQ+II+ + D + L ++K+
Sbjct: 374 HTVIKSNRRFTYEEAQNIIETR---------------------KGDFKEEVLQLDRLAKL 412
Query: 681 LKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR 740
L++ RF GA+ + + F DE G P +D N L EEFMLLAN+T AE I R
Sbjct: 413 LRESRFKAGAINFDRYEVKFEIDEKGKPVSVYFKESKDANKLVEEFMLLANRTVAEKIGR 472
Query: 741 A--FPDSALL--RRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREK 791
+ +L R H P+ KL F ++ G +L T S + L+ + K
Sbjct: 473 VPKGKKAKVLPYRIHDLPDPEKLDNLAQFIARFGYKLRTGGTKTDVSKSINHLLDDIQGK 532
Query: 792 LKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 851
++ +++ + R MQ A Y + GHY LAF YTHFTSP+RRYPD++
Sbjct: 533 KEE-----NLIETVSIRAMQKARYSVH-------NVGHYGLAFDYYTHFTSPIRRYPDMM 580
Query: 852 VHRTLNAALE 861
VHR L L+
Sbjct: 581 VHRLLTKYLD 590
>gi|358372839|dbj|GAA89440.1| cell wall biogenesis protein phosphatase Ssd1 [Aspergillus kawachii
IFO 4308]
Length = 1372
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 193/724 (26%), Positives = 318/724 (43%), Gaps = 78/724 (10%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R +F P+ + L G + RVN NR +AY + D+ I G +NRA
Sbjct: 419 RKTLFTPYLPQANLPALLSNGQLVAGILRVNKKNRSDAYVTTPDLDADIFICGSKDRNRA 478
Query: 216 VEGDFVLIK-VDRLSLWAKMKGFSNNSSI--VEDSNLPTEANG---MHSDICKGKSKVDV 269
+EGDFV ++ +D +W++ K + ++ + A G SD + +V
Sbjct: 479 LEGDFVAVELLDVDEVWSQKKEKEEKKKRKDITEARAGSSAGGDKLSRSDSGANGDRQEV 538
Query: 270 SYEYS---NCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQ 326
+ S +L +DD +E EG + + SD + + +
Sbjct: 539 GPDGSIRRRGSLRQRPTQKKNDD----------VEVEGQSLLLVEEDEISDEQKPLYAGH 588
Query: 327 QNDGMNAIERLSAMISSYPTK--RPTGRVVSIIERSPR--RDGIVGFLNVNQWFNYKGGS 382
+ IER++ + S RP+ + + + R RDG G
Sbjct: 589 I---VAVIERIAGQMFSGTLGLLRPSSQATKEKQEAERLARDG--------------GHG 631
Query: 383 RKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLP-DSIKKRLEEGDATIEMELVA 441
R+ ++ + + + PT + P + + + P D ++K E + +
Sbjct: 632 RQQQERQQDKPKI-----VWFKPTDKRVPLIAIPTEQAPRDFVEKHQEYAN-----RIFV 681
Query: 442 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEV 501
A I W S P ++ G G+++ + A+L +N FS L + W V
Sbjct: 682 ACIKRWPITSLHPFGTLVEQLGEMGDLKVETEALLRDNNFGSDEFSDAVLKSIGWDDWSV 741
Query: 502 PQEE---LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPG 558
E L +R+D R FT++PS +LD+A I+ L+DG VGVH+ D+++FV
Sbjct: 742 SNENDAVLATRRDFRQETTFTVNPSGTKELDNAFHIKPLADGKVEVGVHVTDIAHFVKAN 801
Query: 559 TALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR- 617
+ +D EA+ R T+VY++ R + MLP +S E+ +L PG DR S+ + N +D
Sbjct: 802 SLVDREAKKRGTAVYLMNRLVNMLPTRVSNELCALLPGEDRFTVSVVFKANPETGAIDDD 861
Query: 618 -WIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 676
WIG+ +I+S +LSY+ I G + + ++++LY
Sbjct: 862 VWIGKAIIKSSGRLSYDEVDAAIQGTSALAVPGITAD----------------TLRALYA 905
Query: 677 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 736
V+ ++ R + R+ + ++ D+ P + + + L EE AN A
Sbjct: 906 VTSKFREARLGNRVSRIPPLRLLYQLDDENVPVEHNIFHSSPVRELVEELSYKANFLVAR 965
Query: 737 VIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDY 796
+ A PD A LRR +PN R+L F ++ G LD++SSG SL Q ++ DD
Sbjct: 966 KLVTALPDKAFLRRQMSPNARRLHLFVERMNRLGYGLDSTSSGTLQSSLCQVQD---DD- 1021
Query: 797 VLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTL 856
L + + MQ A Y+ + +DD HY L PVYTHFT+P RRY D+VVHR L
Sbjct: 1022 -LRKGMETILHKAMQRAKYYVASSVQDDQRQ-HYTLNLPVYTHFTNPFRRYADIVVHRQL 1079
Query: 857 NAAL 860
A L
Sbjct: 1080 EAVL 1083
>gi|425779309|gb|EKV17376.1| Cell wall biogenesis protein phosphatase Ssd1, putative [Penicillium
digitatum PHI26]
gi|425779594|gb|EKV17639.1| Cell wall biogenesis protein phosphatase Ssd1, putative [Penicillium
digitatum Pd1]
Length = 1362
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 196/719 (27%), Positives = 322/719 (44%), Gaps = 71/719 (9%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R +F P+ + L G + RVN NR +AY + + D+ I G +NRA
Sbjct: 414 RKTLFTPYLPQANLPALLSNGQLVAGVLRVNKKNRSDAYVTTDDLDADIFICGSKDRNRA 473
Query: 216 VEGDFVLIK-VDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYS 274
+EGD+V I+ +D +W + K + ++ + +N + + + S D
Sbjct: 474 LEGDYVAIELLDVDEVWGQKKEKEEKKKRKDITDARSNSNAGNDKLGRSDSTGDRQEVGP 533
Query: 275 NCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAI 334
+ ++ + ++ N + +E EG + + SD + + +
Sbjct: 534 DGSIRRRGSLRQ---RPTQKKNDD-VEVEGQSLLLCEEDEISDEQKPLYA---------- 579
Query: 335 ERLSAMISSYPTKRPTGRVVSIIERSPRR--DGIVGFLN-VNQWFNYKGGSRKDAKKNRS 391
G VV++IER + G +G L +Q K + + A+
Sbjct: 580 ----------------GHVVAVIERVAGQMFSGTLGLLRPSSQATKEKQEAERQARDGAH 623
Query: 392 SLSVPDR-----EYIQLTPTHPKYPKMVVLVKDLP-DSIKKRLEEGDATIEMELVAARID 445
S DR + + PT + P + + + P D ++K + + + A I
Sbjct: 624 GRSQNDRHQDKPKIVWFKPTDKRVPLIAIPTEQAPRDFVEKHQDYAN-----RIFVASIK 678
Query: 446 EWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQE- 504
W S P ++ G G++ + +A+L +N FS L + W + E
Sbjct: 679 RWPITSLHPFGTLVEQLGEMGDLRVETDALLRDNNFGSDDFSDAVLKSIGWEDWSISSEG 738
Query: 505 -ELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDI 563
L SR+D R IFTIDP+ + L+DA ++RL+DG +GVH+AD+++FV + +D
Sbjct: 739 DALTSRRDFREETIFTIDPADSKSLEDAFHVKRLADGKVEIGVHVADIAHFVKGNSLVDR 798
Query: 564 EAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR--WIGR 621
EA+ R T+VY++ R + MLP +S E+ SL PG DRL S+ + N VVD WIG+
Sbjct: 799 EAKKRGTAVYLVDRIMNMLPTRVSTELCSLVPGEDRLTVSVVFKANPTTGVVDEDVWIGK 858
Query: 622 TVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKIL 681
VI+S +L Y+ +++GK DV +S + SI L+ +
Sbjct: 859 GVIKSAGRLDYDQVNALVEGKPDVNTSGISAD----------------SIHLLHNTAGKF 902
Query: 682 KDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARA 741
++ RF + + + + D+ P + + + L EE AN A + A
Sbjct: 903 REARFGNRVSNVPVQRLLQQLDDENVPVEYNIFESTPAHELVEELSHQANFFVARKLVSA 962
Query: 742 FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDI 801
PD A LRR +PN R+L F ++ G ++D+SSSG SL + + D L
Sbjct: 963 MPDRAFLRRQFSPNSRRLTSFVERMNRLGFEMDSSSSGSLQSSLCKVQ-----DVDLRKG 1017
Query: 802 LINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
+ + MQ A Y+ S D+ HY L PVYTHFT+P RRY D++VHR L A L
Sbjct: 1018 METLIAKAMQRAKYYVSSGAPDEMRQ-HYMLNVPVYTHFTNPSRRYADILVHRQLEAVL 1075
>gi|157150067|ref|YP_001450020.1| ribonuclease R [Streptococcus gordonii str. Challis substr. CH1]
gi|157074861|gb|ABV09544.1| ribonuclease R [Streptococcus gordonii str. Challis substr. CH1]
Length = 782
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 158/441 (35%), Positives = 241/441 (54%), Gaps = 30/441 (6%)
Query: 438 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAI-LYENAICCSGFSPESLSCLP 495
E++ ID++ ++ F A ++ V G + P I+ + + E+ S F + L
Sbjct: 180 EVLKVAIDKYPTKKHDFFVASLVDVVGHVND--PGIDVLEVLESMDIVSVFPEKVLEEAE 237
Query: 496 CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFV 555
VP + +L R DLR FTID + A DLDDA+ I+RL +G +GVHIADVSY+V
Sbjct: 238 RVPDAPTESDLKGRLDLREEITFTIDGADAKDLDDAVHIKRLKNGNFELGVHIADVSYYV 297
Query: 556 LPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV 615
G+ LD EA R+TSVY+ R +PMLP LS + SLNP VDRL S ++++ G VV
Sbjct: 298 KEGSELDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPNVDRLTQSAIMEIDAKGRVV 357
Query: 616 DRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 675
I +TVI++ +++Y DII G D E + GQF+ +V SI S+
Sbjct: 358 KHTITQTVIKTTFRMTYSDVNDIIAG--DEEKA-----------GQFKA--IVPSIDSMV 402
Query: 676 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 735
++ KIL+ RF GAL + ++ + ++ G P D VL R + E FML+AN+T A
Sbjct: 403 QLHKILESMRFKRGALNFDTNEAKIMVNKEGRPVDIVLRQRGIAERMIESFMLVANETVA 462
Query: 736 EVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 794
E A+ P + R H P K+++F + S G+++ ++S Q+L++ E +KD
Sbjct: 463 EHFAKLNLP--FIYRIHEEPKAEKVQKFIDYASSFGIRIYGTASSMSQQALQEIMEAVKD 520
Query: 795 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 854
D+L R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 Q-PYEDVLSMMLLRSMQQARY-------SEHNHGHYGLAAEFYTHFTSPIRRYPDLLVHR 572
Query: 855 TLNAALEAEKLYWKHRRMLPK 875
+ +++++ +++P+
Sbjct: 573 MVRDYGQSKEIAEHFEQVIPE 593
>gi|396463148|ref|XP_003836185.1| hypothetical protein LEMA_P055260.1 [Leptosphaeria maculans JN3]
gi|312212737|emb|CBX92820.1| hypothetical protein LEMA_P055260.1 [Leptosphaeria maculans JN3]
Length = 1398
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 191/724 (26%), Positives = 325/724 (44%), Gaps = 88/724 (12%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R +F P+ + L G + RVN NR +AY + D+ I G +NRA
Sbjct: 455 RKTLFTPYLPQATLPALLGDGQLVAGILRVNKKNRSDAYVTTTDLDADIFICGSKDRNRA 514
Query: 216 VEGDFVLIK-VDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYS 274
+EGD V ++ +D +W + + ++++ +G S + V+ +
Sbjct: 515 LEGDLVAVELLDVDEVWGQKREKEEKKKRKDNAD------------PRGGS-IAVNDATT 561
Query: 275 NCTLLSEKGIHHDDDSSSEAYNQEM--IEREGYNYINGHHPSTSDSTEKVSSSQQNDGMN 332
SE GI ++ +E EG + + +D + + + +
Sbjct: 562 QPETGSEGGIRRRGSLRQRPTQKKNDDVEVEGQSLLLMEEEEINDELKPLYAGHI---VA 618
Query: 333 AIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLN-VNQWFNYKGGSRKDAKKNRS 391
IER++ + S G +G L +Q K + + A++ S
Sbjct: 619 VIERVAGQMFS---------------------GSLGLLRPSSQATKEKQEAERQAREGHS 657
Query: 392 SLSVPDRE----YIQLTPTHPKYPKMVVLVKDLP-DSIKKRLEEGDATIEMELVAARIDE 446
P+R+ + PT + P + + + P D ++K + D + A I
Sbjct: 658 GRPQPERQDKPKIVWFKPTDKRVPLIAIPTEQAPRDFVEKHQDYAD-----RIFVACIKR 712
Query: 447 WNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVP---Q 503
W S P ++ G G+++ + +A+L +N FS + + W V +
Sbjct: 713 WPITSLHPFGTLVEQLGVMGDLKVETDALLRDNNFGPDDFSDAVIKNVGFEDWTVANDGE 772
Query: 504 EELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDI 563
+ L +R+D RN FTIDP+ + +LDDA+ + L DG +G+H+ADV++F+ + +D
Sbjct: 773 DALKNRRDFRNEETFTIDPNGSKELDDAIHFKYLEDGRVEIGMHVADVAHFIKANSLVDR 832
Query: 564 EAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV---DRWIG 620
EA+ R T+VY++ R + MLP LS ++ LNPG +R SI + ++ V + W+G
Sbjct: 833 EAKKRGTAVYLMNRTVNMLPPRLSNDICCLNPGEERYTVSIVFKVDPQSGRVFEDETWVG 892
Query: 621 RTVIRSCCKLSYEHAQDIIDGK-FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 679
+ VI+S KLSY+ +I+G +V ++ T + IK L+ +++
Sbjct: 893 KAVIKSSGKLSYDEVDTVINGSDGEVTAART------------------KDIKMLHHITQ 934
Query: 680 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 739
+ RF + + + ++ D+ P + + + EE LAN T A+ +A
Sbjct: 935 KFRQARFGGRSSDVPALRLMYQLDDENVPVEQNIFDSSPAHECIEELSHLANATIAKKLA 994
Query: 740 RAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLF 799
P+ ALLRR PN R+L G ++DT SSG SL Q ++DD
Sbjct: 995 TGLPEKALLRRQAPPNPRRLTTIAERMGAIGYEIDTESSGSLQNSLFQ----VEDD---- 1046
Query: 800 DILINYAT---RPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTL 856
DI T + M A YF +G ++ + HYAL P+YTHFT+P RRY D++VHR L
Sbjct: 1047 DIRKGMETLVIKSMPRAKYFVAGKLPEE-QYPHYALNLPLYTHFTNPSRRYADIIVHRQL 1105
Query: 857 NAAL 860
A L
Sbjct: 1106 EAVL 1109
>gi|325294704|ref|YP_004281218.1| ribonuclease R [Desulfurobacterium thermolithotrophum DSM 11699]
gi|325065152|gb|ADY73159.1| ribonuclease R [Desulfurobacterium thermolithotrophum DSM 11699]
Length = 704
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 186/567 (32%), Positives = 284/567 (50%), Gaps = 71/567 (12%)
Query: 300 IEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIER 359
+ REGY +++ P V N MN ++ + R G++VS+IER
Sbjct: 73 VYREGYGFVD---PINGGKGVFVPGRNMNGAMNGDIVAVEIVKEFKDGRKEGKIVSVIER 129
Query: 360 SPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKD 419
+ ++ +VG + K R +P+ + I+ +++ +D
Sbjct: 130 AIKK--VVG---------------RVEKTRRYCFVIPEDKRIRYD--------ILLTSED 164
Query: 420 LPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINA-ILYE 478
+++E GD V A I + E+ P +L G+ G P+++ ++
Sbjct: 165 C-----EKVENGD------YVVAEIISYPSETRGPVGRLLENLGKTG---PKLDIELIIR 210
Query: 479 NAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLS 538
F PE+L + V +E+L R DLR FTID A D DDA++IE+LS
Sbjct: 211 KYDLPVEFPPEALEEAEKISDVVIEEDLKGRVDLREQLCFTIDGENARDFDDAVAIEKLS 270
Query: 539 DGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVD 598
DG ++ VHIADVS++V PG+ALD EA R TSVY R IPMLP LS + SLNP VD
Sbjct: 271 DGNYKLYVHIADVSHYVKPGSALDREAYKRGTSVYFPDRCIPMLPEKLSNGICSLNPNVD 330
Query: 599 RLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQL 658
RL F+ +N G VVD I +VI S +L+Y AQ IIDG D E+ +
Sbjct: 331 RLTFTCEMVINKKGIVVDYKIYESVIHSKARLTYTIAQKIIDG--DKEAID--------- 379
Query: 659 YGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGRED 718
++ VV S+K++YE+++IL KR+ G+L + +PV + G P D + R
Sbjct: 380 ----KFPHVVESLKTMYELAQILYKKRYKRGSLDFDLPEPVVVLSTEGEPIDIYRAERLW 435
Query: 719 LNFLFEEFMLLANKTAAEVIA-RAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS 777
+ + EEFM+ AN+T AE + +P ++ R H +P+ KL+EF F G+++ +
Sbjct: 436 AHRIIEEFMIAANETVAEYMFWTDYP--SVYRIHESPDREKLQEFLNFVRSLGIRVPSVK 493
Query: 778 SGQFHQSLEQAREKLKDDYVLFDILINYAT-RPMQLASYFCSGDFKDDTDWGHYALAFPV 836
+ + L++ E+++ + L+NY R M A Y S D + GH+ LA
Sbjct: 494 NDIQPKMLQKILEEVEGKSE--EKLVNYLMLRTMARAKY--SPD-----NVGHFGLASTY 544
Query: 837 YTHFTSPLRRYPDLVVHRTLNAALEAE 863
YTHFTSP+RRY DL +HR + AL E
Sbjct: 545 YTHFTSPIRRYADLQLHRQVKMALNGE 571
>gi|224025571|ref|ZP_03643937.1| hypothetical protein BACCOPRO_02311 [Bacteroides coprophilus DSM
18228]
gi|224018807|gb|EEF76805.1| hypothetical protein BACCOPRO_02311 [Bacteroides coprophilus DSM
18228]
Length = 753
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 156/454 (34%), Positives = 231/454 (50%), Gaps = 57/454 (12%)
Query: 420 LPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYEN 479
+P K ++GD + +I EW EE+ P V+ + G+ G+ +++AIL E
Sbjct: 215 IPKEKLKGGKDGDKAV------VKIIEWPEEAKNPFGEVVDILGKAGDNTTEMHAILAEY 268
Query: 480 AICCSGFSPESL-SCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLS 538
+ + P+++ + + E+ E+ R+D R+ FTIDP A D DDALSI +L
Sbjct: 269 GLPYT--YPQNVEAAADKLSAEITPEDYAEREDFRDVVTFTIDPKDAKDFDDALSIRQLK 326
Query: 539 DGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVD 598
G+ VGVHIADVS++V G+ +D EA R+TSVY++ R IPMLP L + SL P +
Sbjct: 327 PGLWEVGVHIADVSHYVKEGSIIDKEAAKRATSVYLVDRTIPMLPERLCNFICSLRPDEE 386
Query: 599 RLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQL 658
+LA+S+ +D+N +V + I TVIRS + +YE AQ+II+ GEG
Sbjct: 387 KLAYSVIFDMNEKAEVKNYRICHTVIRSNRRFTYEEAQNIIE----------TGEG---- 432
Query: 659 YGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGRED 718
D + L +++IL++KR GA+ + + F DE G P ++
Sbjct: 433 -------DYKEEVLELNRLAQILREKRLAAGAINFDRCEVKFEIDEKGKPVSVYFKVSKE 485
Query: 719 LNFLFEEFMLLANKTAAEVIARA----FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLD 774
N L EEFMLLAN+T AE I + P R H P+ KL F ++ G ++
Sbjct: 486 ANKLIEEFMLLANRTVAEHIGKVPKNRKPKVFPYRIHDLPDPDKLDNLNQFIARFGYKIR 545
Query: 775 TSSS--------GQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTD 826
T S + +E +E+ +++ + R MQ A Y +
Sbjct: 546 TGGSKNEVSKSINRLLGDIEGKKEQ--------NLIETVSLRAMQKARYSI-------YN 590
Query: 827 WGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
GHY LAF YTHFTSP+RRYPDL+VHR L L
Sbjct: 591 IGHYGLAFDFYTHFTSPIRRYPDLMVHRLLTRYL 624
>gi|353228702|emb|CCD74873.1| ribonuclease II-related [Schistosoma mansoni]
Length = 991
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 200/665 (30%), Positives = 304/665 (45%), Gaps = 84/665 (12%)
Query: 324 SSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSR 383
S+Q+N + LS M S P + I RS +VG ++ N W +Y
Sbjct: 204 SAQENCAAEFVNDLSNMSGSKPNEDCFKS--ETISRSLPCGFVVGVISHN-WRDYVCTYV 260
Query: 384 KDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAAR 443
+ +N S S + +I +TP + P L++ I K + E R
Sbjct: 261 PKSTEN-SLDSKSESGWIIVTPWDRRIP----LIRLHTTQISK--------LTRERFIVR 307
Query: 444 IDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV----PW 499
ID W+ S +P H + G G++E + IL E+ + F+ LS L + PW
Sbjct: 308 IDTWDSYSAYPSGHFVQTLGCIGDLETETQTILIEHNLVIRNFTDAQLSELAPLSVQRPW 367
Query: 500 EVPQEELLSRKDLR-----------NFCIFTIDPSTATDLDDALSIERLSDGIS------ 542
+V EE+ R+DLR + IF+IDP D+DDALS++ L +
Sbjct: 368 KVDLEEVKKRRDLRSPTISGNPDSEDILIFSIDPPGCQDVDDALSVQWLPPIVDEYGKEH 427
Query: 543 ---RVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDR 599
++GVHIADVSYFV G+ +D EA+ RSTS+Y+ R+ MLP LLS ++ SL G DR
Sbjct: 428 KRLQLGVHIADVSYFVPSGSYIDSEARRRSTSIYLADRRYDMLPGLLSGDLCSLWSGRDR 487
Query: 600 LAFSIFWDLN-SAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDG-KFDVESSNTLGEGWPQ 657
A S+ W+++ + D+ + W GRTVI S KL+YE AQ I D D SSN+
Sbjct: 488 YAVSVLWEIDMDSFDISNIWYGRTVIHSSYKLTYELAQRIYDSVTADNISSNSCA----- 542
Query: 658 LYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF----DEYGTPYDSVL 713
E +SI L +++ ++++R G L LE+ + F G D +
Sbjct: 543 ----VEEFIKNKSILLLVDIASNVRERRLAKGGLELESVEVSVQFANPETRTGKLEDLIP 598
Query: 714 SGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQL 773
+++ E M+ AN A +PD A LRRHP P E + + G L
Sbjct: 599 KEPLEMHNTVAELMIFANHWVARRCVEYYPDRACLRRHPPPRPEYFDELKRCIACRGFVL 658
Query: 774 DTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTD-WGHYAL 832
DTSS+ SL+ A + +D + ++ TR M A YF +G D + HY L
Sbjct: 659 DTSSNLSLANSLKNASD--PNDPEVNKVVRQLVTRTMTNALYFSTGSSNMTQDQFSHYGL 716
Query: 833 AFPVYTHFTSPLRRYPDLVVHRTLNAAL-EAEKLYWKHRRMLPKNNHREGVRGRFLTGIF 891
A +YTHFTSP+RRY D++VHR L A+L + L + KN + G+F
Sbjct: 717 ALNLYTHFTSPIRRYADIIVHRLLLASLGDFRSLTTTQSELNSKNTELVTILENNTDGLF 776
Query: 892 YDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILL 951
++ L ++ H N++ A + V+ + ++L+ +
Sbjct: 777 SSEE-------------------------LASICNHMNEQHWAAQQVQRSSLELFQALFF 811
Query: 952 KKKEV 956
K K V
Sbjct: 812 KDKAV 816
>gi|448535104|ref|XP_003870907.1| hypothetical protein CORT_0G00920 [Candida orthopsilosis Co 90-125]
gi|380355263|emb|CCG24780.1| hypothetical protein CORT_0G00920 [Candida orthopsilosis]
Length = 984
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 168/470 (35%), Positives = 244/470 (51%), Gaps = 37/470 (7%)
Query: 413 MVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQI 472
++++ K LP I+ R ++ + +V +D W +S +P H + G E +
Sbjct: 413 VILMDKTLP-KIRIRTKKAKEYLGQRIVVV-VDSWPSDSKYPNGHFVRALGEVESAEAET 470
Query: 473 NAILYENAICCSGFSPESLSCLPCVP--WEVPQ------EELLSRKDLRNFCIFTIDPST 524
A+L E+ + FS L CLP W VP +L R DLR+ + +IDP
Sbjct: 471 EALLLEHDVEYRPFSKNVLDCLPKEGDNWVVPDITNTDDLQLQKRVDLRDKLVCSIDPPN 530
Query: 525 ATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPV 584
D+DDAL ++L +G VGVHIADV++FV GTALD E R TSVY++ ++I MLP+
Sbjct: 531 CVDIDDALHAQKLPNGNYEVGVHIADVTHFVKAGTALDQEGASRGTSVYLVDKRIDMLPM 590
Query: 585 LLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFD 644
LL + SL P VDR AFS+ W+++ ++V+ +++I+S SYE AQ ID
Sbjct: 591 LLGTNLCSLKPFVDRFAFSVIWEVDEDANIVNVKFMKSIIKSRQAFSYEQAQLRIDD--- 647
Query: 645 VESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFLFD 703
P + ++ S++ L ++SK LK KR GAL L + + V +
Sbjct: 648 -----------PN-----QQDELTNSMRILLKLSKKLKQKRLDAGALNLASPEVKVHMDS 691
Query: 704 EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFE 763
E P + + + N L EEFML AN + A I A+P +A+LRRH AP
Sbjct: 692 ETSDPQEVEIKKLLETNSLVEEFMLFANISVARKIYDAYPQTAMLRRHAAPPATNFETLN 751
Query: 764 AFCS--KHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGD 820
+ K+GL + T SS SL++ + D Y F+ LI +TR M A YF SG
Sbjct: 752 DMLNVRKNGLSISTESSKALADSLDRCVDP-NDSY--FNTLIRIMSTRCMMAAEYFPSGS 808
Query: 821 FKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR 870
+ ++ HY LA +YTHFTSP+RRY D+V HR L A+ E L HR
Sbjct: 809 Y-GYPEFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYENLDLSHR 857
>gi|313204897|ref|YP_004043554.1| RNAse r [Paludibacter propionicigenes WB4]
gi|312444213|gb|ADQ80569.1| RNAse R [Paludibacter propionicigenes WB4]
Length = 712
Score = 238 bits (606), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 166/528 (31%), Positives = 259/528 (49%), Gaps = 83/528 (15%)
Query: 340 MISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDRE 399
+ +S ++P G VV II+R+ +D VG L+V+ + + L++ +R
Sbjct: 126 LYASRKGQQPEGEVVEIIKRA--QDTFVGILDVSDSYAF--------------LTLDNR- 168
Query: 400 YIQLTPTHPKYPKMVVLVKDL--PDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAH 457
++ D+ P K +L G + + ++ W + P
Sbjct: 169 ---------------IMTNDIFIP---KNKLNGGKSG---QKAVVKLLGWEPNAKNPVGE 207
Query: 458 VLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCI 517
V+ V G G+ +++AIL E + + + + + + +E+ R D+R+
Sbjct: 208 VIDVLGDKGDNTAEMHAILAEFGLPYK-YPADVEAAAEKIDAGITPDEVAKRIDMRSITT 266
Query: 518 FTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 577
FT+DP A D DDALS+ +L DG+ VGVHIADV+++V P + ++ E + R+TSVY++ R
Sbjct: 267 FTVDPRDAKDFDDALSLRKLDDGLWEVGVHIADVTHYVRPDSIIEQEGRERATSVYLVDR 326
Query: 578 KIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQD 637
IPMLP LS + SL P D+L +S+ + +N ++ I +TV RS + +YE AQ
Sbjct: 327 TIPMLPEHLSNGICSLRPDEDKLTYSVIFKMNDKAEIQHYKIAKTVTRSNRRFTYEEAQA 386
Query: 638 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 697
II+ GEG E+ D + ++ L +KIL+ KRF +GA+ + +
Sbjct: 387 IIE----------TGEG--------EYKDEILTMDRL---AKILRKKRFENGAIAFDRVE 425
Query: 698 PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR----AFPDSALLRRHPA 753
F DE G P ++D N + EEFMLLANKT A I + + + R H
Sbjct: 426 VRFEIDEKGKPVSVFFKEQKDSNKMIEEFMLLANKTVATHIGKPGKGQKAKTFVYRIHDV 485
Query: 754 PNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREKLKDDYVLFDILINYATR 808
PN KL F F + G L TS S + L++ + K + +++ A R
Sbjct: 486 PNPDKLNNFAVFIKRFGYNLKTSGKQTAISSSINALLDEVQGKKEQ-----NLIETLAIR 540
Query: 809 PMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTL 856
M A Y S + GHY LAF YTHFTSP+RRYPD++VHR L
Sbjct: 541 SMAKAIYSTS-------NMGHYGLAFDFYTHFTSPIRRYPDMMVHRLL 581
>gi|256422681|ref|YP_003123334.1| ribonuclease R [Chitinophaga pinensis DSM 2588]
gi|256037589|gb|ACU61133.1| ribonuclease R [Chitinophaga pinensis DSM 2588]
Length = 705
Score = 238 bits (606), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 154/433 (35%), Positives = 215/433 (49%), Gaps = 51/433 (11%)
Query: 441 AARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWE 500
R+ W E++ P V+ V + + IL E+ S F E L L +
Sbjct: 126 VVRVVAWGEKTRKPVGEVVEVLDASNTNDLAMKEILIESGFPLS-FPDEVLKELNEIQEN 184
Query: 501 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 560
+ EE+ RKD R FTIDP A D DDA+SI +L VGVHIADVS++V P TA
Sbjct: 185 IDAEEVKKRKDFRKTLTFTIDPVDAKDFDDAISIRKLRGNWYEVGVHIADVSHYVQPDTA 244
Query: 561 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIG 620
LD EA R+TSVY+ R +PMLP +S E+ SL P D+L FS + +N G++ + WIG
Sbjct: 245 LDKEADKRATSVYLPDRVLPMLPEKISNELCSLRPHEDKLTFSAVFKMNDKGEIKENWIG 304
Query: 621 RTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKI 680
RTVI S + +YE Q++I+ GEG + D + L ++S+
Sbjct: 305 RTVIHSDHRFTYEQVQEVIE----------TGEG--------PYKD---EVLLLNKISQT 343
Query: 681 LKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR 740
L+ RF +GA+ + + F DE P V+ ++ + L EE MLLAN+T AE +
Sbjct: 344 LRKVRFENGAINFSSQEVRFQLDENAKPIGIVIKESKEAHQLIEELMLLANRTVAEYVYN 403
Query: 741 ---------AFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS----SGQFHQSLEQ 787
FP R H P+ KL+ F AF K G +L+ + + F++ L+
Sbjct: 404 IRIGTNQHVPFP----YRVHDTPDEEKLKMFSAFARKFGHKLEVDNLEKLARSFNEMLQL 459
Query: 788 AREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRY 847
A K + +L R M A+Y D GHY L F Y HFTSP+RRY
Sbjct: 460 AHGKPEQ-----HVLETLGIRTMAKAAYTTD-------DIGHYGLGFEHYCHFTSPIRRY 507
Query: 848 PDLVVHRTLNAAL 860
PD++VHR L L
Sbjct: 508 PDVLVHRVLQQCL 520
>gi|355684013|gb|AER97263.1| DIS3 mitotic control-like protein -like protein [Mustela putorius
furo]
Length = 611
Score = 238 bits (606), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 140/372 (37%), Positives = 211/372 (56%), Gaps = 5/372 (1%)
Query: 495 PCVPWEVPQEELLSRKDLR-NFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSY 553
P PW+V EE RKDLR +F+IDP D+DD LS+ L++G +GVHIADV++
Sbjct: 9 PENPWKVSPEEERERKDLRETHLVFSIDPKGCEDVDDTLSVRTLANGNLELGVHIADVTH 68
Query: 554 FVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLN-SAG 612
FV P + +DIEA+ R+ + Y+ R+ MLP +LS ++ SL GVDR A S+ W+L+ ++
Sbjct: 69 FVPPNSYIDIEARTRAITYYLADRRYDMLPSILSADLCSLLGGVDRYAVSVIWELDKTSY 128
Query: 613 DVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIK 672
++ W RT+IRS KL YE AQ+++DG F + + Q + ++V +I
Sbjct: 129 EIKTVWYSRTIIRSAYKLFYEAAQELLDGNFHIVDDIPEFRDLDEKSRQAKLEELVWAIG 188
Query: 673 SLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANK 732
L E+++ ++ KR GAL LE + DE +D + +++ E M+LAN
Sbjct: 189 KLTEIARHIRAKRDRCGALELEGVEIRVQLDEKKNIHDLIPRQPLEVHETVAECMILANH 248
Query: 733 TAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKL 792
A+ I +FP ALLR+HP P E G +DT S+ SL+ A +
Sbjct: 249 WVAKKIWESFPHQALLRQHPPPQQEFFSELRECAKAKGFFIDTRSNKTLADSLDNAND-- 306
Query: 793 KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 852
+D ++ +L + AT+ M A YF +G ++ ++ HY LA YTHFTSP+RRY D+VV
Sbjct: 307 PNDPIVNRLLRSMATQAMSNALYFSTGSCAEE-EFHHYGLALDKYTHFTSPIRRYSDIVV 365
Query: 853 HRTLNAALEAEK 864
HR L AA+ +K
Sbjct: 366 HRLLMAAISKDK 377
>gi|256084634|ref|XP_002578532.1| ribonuclease II-related [Schistosoma mansoni]
Length = 991
Score = 238 bits (606), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 200/665 (30%), Positives = 304/665 (45%), Gaps = 84/665 (12%)
Query: 324 SSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSR 383
S+Q+N + LS M S P + I RS +VG ++ N W +Y
Sbjct: 204 SAQENCAAEFVNDLSNMSGSKPNEDCFKS--ETISRSLPCGFVVGVISHN-WRDYVCTYV 260
Query: 384 KDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAAR 443
+ +N S S + +I +TP + P L++ I K + E R
Sbjct: 261 PKSTEN-SLDSKSESGWIIVTPWDRRIP----LIRLHTTQISK--------LTRERFIVR 307
Query: 444 IDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV----PW 499
ID W+ S +P H + G G++E + IL E+ + F+ LS L + PW
Sbjct: 308 IDTWDSYSAYPSGHFVQTLGCIGDLETETQTILIEHNLVIRNFTDAQLSELAPLSVQRPW 367
Query: 500 EVPQEELLSRKDLR-----------NFCIFTIDPSTATDLDDALSIERLSDGIS------ 542
+V EE+ R+DLR + IF+IDP D+DDALS++ L +
Sbjct: 368 KVDLEEVKKRRDLRSPTISGNPDSEDILIFSIDPPGCQDVDDALSVQWLPPIVDEYGKEH 427
Query: 543 ---RVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDR 599
++GVHIADVSYFV G+ +D EA+ RSTS+Y+ R+ MLP LLS ++ SL G DR
Sbjct: 428 KRLQLGVHIADVSYFVPSGSYIDSEARRRSTSIYLADRRYDMLPGLLSGDLCSLWSGRDR 487
Query: 600 LAFSIFWDLN-SAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDG-KFDVESSNTLGEGWPQ 657
A S+ W+++ + D+ + W GRTVI S KL+YE AQ I D D SSN+
Sbjct: 488 YAVSVLWEIDMDSFDISNIWYGRTVIHSSYKLTYELAQRIYDSVTADNISSNSCA----- 542
Query: 658 LYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF----DEYGTPYDSVL 713
E +SI L +++ ++++R G L LE+ + F G D +
Sbjct: 543 ----VEEFIKNKSILLLVDIASNVRERRLAKGGLELESVEVSVQFANPETRTGKLEDLIP 598
Query: 714 SGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQL 773
+++ E M+ AN A +PD A LRRHP P E + + G L
Sbjct: 599 KEPLEMHNTVAELMIFANHWVARRCVEYYPDRACLRRHPPPRPEYFDELKRCIACRGFVL 658
Query: 774 DTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTD-WGHYAL 832
DTSS+ SL+ A + +D + ++ TR M A YF +G D + HY L
Sbjct: 659 DTSSNLSLANSLKNASD--PNDPEVNKVVRQLVTRTMTNALYFSTGSSNMTQDQFSHYGL 716
Query: 833 AFPVYTHFTSPLRRYPDLVVHRTLNAAL-EAEKLYWKHRRMLPKNNHREGVRGRFLTGIF 891
A +YTHFTSP+RRY D++VHR L A+L + L + KN + G+F
Sbjct: 717 ALNLYTHFTSPIRRYADIIVHRLLLASLGDFRSLTTTQSELNSKNTELVTILENNTDGLF 776
Query: 892 YDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILL 951
++ L ++ H N++ A + V+ + ++L+ +
Sbjct: 777 SSEE-------------------------LASICNHMNEQHWAAQQVQRSSLELFQALFF 811
Query: 952 KKKEV 956
K K V
Sbjct: 812 KDKAV 816
>gi|429740789|ref|ZP_19274464.1| ribonuclease R [Porphyromonas catoniae F0037]
gi|429160133|gb|EKY02610.1| ribonuclease R [Porphyromonas catoniae F0037]
Length = 748
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 157/438 (35%), Positives = 222/438 (50%), Gaps = 49/438 (11%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 499
V RI +W+ + P+ V+ V G+ GE +++AIL E + + E +
Sbjct: 203 VVVRILDWDARAKNPRGEVIDVLGKSGENSTEMHAILAEFGLPYK-YPEEVERAAEELSG 261
Query: 500 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 559
E+ EEL R+D R TIDP A D DDALS LS VGVHIADVS++V PG
Sbjct: 262 EITSEELAQREDFRGVLTCTIDPRDAKDFDDALSFRPLSGNRYEVGVHIADVSHYVQPGG 321
Query: 560 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 619
+D EA R+TSVY++ R IPMLP LS + SL P D+ A+S + L++ +V I
Sbjct: 322 IIDDEAYRRATSVYLVDRTIPMLPERLSNFLCSLRPDEDKYAYSCIFTLDAEAQLVSARI 381
Query: 620 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 679
RTVIRS + SYE AQ+IID G G D +I +L+++++
Sbjct: 382 ARTVIRSTRRFSYEEAQEIID----------TGRG-----------DHAEAILTLHQLAQ 420
Query: 680 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 739
L+ +RF G++ + + F D+ G P + + + L EEFMLLAN+T AE I+
Sbjct: 421 KLRARRFEKGSIAFDRPEVRFELDKDGKPIAVHIKESKPAHQLIEEFMLLANRTVAERIS 480
Query: 740 RA--------------FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSL 785
A P + + R H AP+ KLR F ++ G +L T +++
Sbjct: 481 DASRQDITPALHLKKRTPPTFVYRIHEAPDEEKLRSLSEFVARMGYKLRTEGGA---EAV 537
Query: 786 EQAREKLKDDYV---LFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTS 842
Q+ KL +D +++ A R M A Y + GHY L F YTHFTS
Sbjct: 538 TQSLNKLLNDIKGKPEENMISMLAIRSMAKARYTTA-------HIGHYGLGFESYTHFTS 590
Query: 843 PLRRYPDLVVHRTLNAAL 860
P+RRYPDL+VHR L L
Sbjct: 591 PIRRYPDLMVHRLLTRYL 608
>gi|255936549|ref|XP_002559301.1| Pc13g08760 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583921|emb|CAP91945.1| Pc13g08760 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1368
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 195/719 (27%), Positives = 323/719 (44%), Gaps = 71/719 (9%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R +F P+ + L G + RVN NR +AY + + D+ I G +NRA
Sbjct: 420 RKTLFTPYLPQANLPALLSNGQLVAGVLRVNKKNRSDAYVTTDDLDADIFICGSKDRNRA 479
Query: 216 VEGDFVLIK-VDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYS 274
+EGD+V I+ +D +W + K + ++ + +N + + + S D
Sbjct: 480 LEGDYVAIELLDVDEVWGQKKEKEEKKKRKDITDARSNSNAGNDKLGRSDSTGDRQEVGP 539
Query: 275 NCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAI 334
+ ++ + ++ N + +E EG + + SD + + +
Sbjct: 540 DGSIRRRGSLRQ---RPTQKKNDD-VEVEGQSLLLCEEDEISDEQKPLYA---------- 585
Query: 335 ERLSAMISSYPTKRPTGRVVSIIERSPRR--DGIVGFLN-VNQWFNYKGGSRKDAKKNRS 391
G VV++IER + G +G L +Q K + + A+
Sbjct: 586 ----------------GHVVAVIERVAGQMFSGTLGLLRPSSQATKEKQEAERQARDGAH 629
Query: 392 SLSVPDR-----EYIQLTPTHPKYPKMVVLVKDLP-DSIKKRLEEGDATIEMELVAARID 445
S DR + + PT + P + + + P D ++K + + + A I
Sbjct: 630 GRSHNDRHQDKPKIVWFKPTDKRVPLIAIPTEQAPRDFVEKHQDYAN-----RIFVASIK 684
Query: 446 EWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQE- 504
W S P ++ G G++ + +A+L +N FS L + W V E
Sbjct: 685 RWPITSLHPFGTLVEQLGEMGDLRVETDALLRDNNFGSDDFSDAVLKSIGWEDWSVSSEG 744
Query: 505 -ELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDI 563
L SR+D R IFTIDP+ + L+DA ++ L+DG +GVH+AD+++FV + +D
Sbjct: 745 DALASRRDFREETIFTIDPADSKSLEDAFHVKSLADGKVEIGVHVADIAHFVKGNSLVDR 804
Query: 564 EAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR--WIGR 621
EA+ R T+VY++ R + MLP +S E+ SL PG DRL S+ + NS VVD WIG+
Sbjct: 805 EAKKRGTAVYLVDRIMNMLPTRVSTELCSLVPGEDRLTVSVVFKANSTTGVVDEDVWIGK 864
Query: 622 TVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKIL 681
+I+S +L Y+ ++ GK DV +S + SI+ L+ +
Sbjct: 865 GIIKSAGRLDYDQVNALVQGKSDVNTSGISAD----------------SIRLLHNTAGKF 908
Query: 682 KDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARA 741
++ RF + + + + D+ P + + + L EE AN A + A
Sbjct: 909 REARFGNRVSNVPVQRLLQQLDDENVPVEYNIFESTPAHELVEELSHQANFFVARKLVSA 968
Query: 742 FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDI 801
P+ A LRR +PN R+L F ++ G ++D+SSSG SL + + D L
Sbjct: 969 MPERAFLRRQFSPNSRRLTSFVERMNRLGFEMDSSSSGSLQSSLCKVQ-----DVDLRKG 1023
Query: 802 LINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
+ ++ MQ A Y+ S D+ HY L PVYTHFT+P RRY D++VHR L A L
Sbjct: 1024 METLISKAMQRAKYYVSSGAPDEMRQ-HYMLNVPVYTHFTNPSRRYADILVHRQLEAVL 1081
>gi|422870496|ref|ZP_16916989.1| ribonuclease R [Streptococcus sanguinis SK1087]
gi|328946711|gb|EGG40849.1| ribonuclease R [Streptococcus sanguinis SK1087]
Length = 782
Score = 236 bits (603), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 156/441 (35%), Positives = 239/441 (54%), Gaps = 30/441 (6%)
Query: 438 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAI-LYENAICCSGFSPESLSCLP 495
E++ ID++ ++ F A ++ V G + P I+ + + E+ S FS + L
Sbjct: 180 EVLKVAIDKYPTKKHDFFVASLVDVVGHVND--PGIDVLEVLESMDIVSEFSEKVLEEAE 237
Query: 496 CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFV 555
VP + +L R DLR IFTID + A DLDDA+ I+RL +G +GVHIADVSY+V
Sbjct: 238 RVPDAPTESDLARRLDLREEIIFTIDGADAKDLDDAVHIKRLKNGNFELGVHIADVSYYV 297
Query: 556 LPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV 615
G+ LD EA R+TSVY+ R +PMLP LS + SLNP VDRL S ++++ G VV
Sbjct: 298 KEGSELDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPNVDRLTQSAIMEIDAKGRVV 357
Query: 616 DRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 675
I +TVI++ +++Y DII G D E + ++ +V SI S+
Sbjct: 358 KHTITQTVIKTTFRMTYSDVNDIIAG--DQEKAE-------------QFKAIVPSIDSMV 402
Query: 676 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 735
+ +IL+ RF GAL + ++ + ++ G P D VL R + E FML+AN+T A
Sbjct: 403 RLHEILESMRFKRGALNFDTNEAKIMVNKEGRPVDIVLRQRGIAERMIESFMLVANETVA 462
Query: 736 EVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 794
E A+ P + R H P K+++F + S G+++ ++S Q+L+ E +KD
Sbjct: 463 EHFAKLNLP--FIYRIHEEPKAEKVQKFIDYASSFGIRIYGTASSMSQQALQDIMEAVKD 520
Query: 795 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 854
D+L R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 Q-PYEDVLSMMLLRSMQQARY-------SEHNHGHYGLAAEFYTHFTSPIRRYPDLLVHR 572
Query: 855 TLNAALEAEKLYWKHRRMLPK 875
+ +++++ +++P+
Sbjct: 573 MVRDYGKSKEIAEHFEQVIPE 593
>gi|422859716|ref|ZP_16906360.1| ribonuclease R [Streptococcus sanguinis SK330]
gi|327470599|gb|EGF16055.1| ribonuclease R [Streptococcus sanguinis SK330]
Length = 782
Score = 236 bits (603), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 157/441 (35%), Positives = 242/441 (54%), Gaps = 30/441 (6%)
Query: 438 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAI-LYENAICCSGFSPESLSCLP 495
E++ ID++ ++ F A ++ V G + P I+ + + E+ S F + L
Sbjct: 180 EVLKVVIDKYPTKKHDFFVASLVDVVGHVND--PGIDVLEVLESMDIVSEFPEKVLEEAE 237
Query: 496 CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFV 555
VP + +L+ R DLR+ FTID + A DLDDA+ I+RL +G +GVHIADVSY+V
Sbjct: 238 RVPDAPTESDLVGRLDLRDEITFTIDGADAKDLDDAVHIKRLKNGNFELGVHIADVSYYV 297
Query: 556 LPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV 615
G+ LD EA R+TSVY+ R +PMLP LS + SLNP VDRL S ++++ G VV
Sbjct: 298 KEGSELDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPNVDRLTQSAIMEIDAKGRVV 357
Query: 616 DRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 675
I +TVI++ +++Y DII G D E + GQF+ +V SI S+
Sbjct: 358 KHTITQTVIKTTFRMTYSDVNDIIAG--DEEKA-----------GQFKA--IVPSIDSMV 402
Query: 676 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 735
++ +IL+ RF GAL + ++ + ++ G P D VL R + E FML+AN+T A
Sbjct: 403 QLHEILERMRFKRGALNFDTNEAKIMVNKEGRPVDIVLRQRGIAERMIESFMLVANETVA 462
Query: 736 EVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 794
E A+ P + R H P K+++F + S G+++ ++S Q+L+ E +KD
Sbjct: 463 EHFAKLNLP--FIYRIHEDPKAEKVQKFIDYASSFGIRIYGTASSMSQQALQDIMEAVKD 520
Query: 795 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 854
D+L R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 Q-PYEDVLSMMLLRSMQQARY-------SEHNHGHYGLAAEFYTHFTSPIRRYPDLLVHR 572
Query: 855 TLNAALEAEKLYWKHRRMLPK 875
+ +++++ +++P+
Sbjct: 573 MVRDYGKSKEIAEHFEQVIPE 593
>gi|402846031|ref|ZP_10894350.1| ribonuclease R [Porphyromonas sp. oral taxon 279 str. F0450]
gi|402268583|gb|EJU17950.1| ribonuclease R [Porphyromonas sp. oral taxon 279 str. F0450]
Length = 755
Score = 236 bits (603), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 157/437 (35%), Positives = 221/437 (50%), Gaps = 47/437 (10%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVP 498
V RI +W+ +S P+ V+ + G+ G+ +++AIL E + S PE++ +
Sbjct: 206 VVVRITDWDRKSKNPRGEVVDILGKAGDNSTEMHAILAEFGLPYS--YPEAVEKAAEALS 263
Query: 499 WEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPG 558
E+ +EEL R+D R TIDP A D DDALS L +G VGVHIADVS++V PG
Sbjct: 264 AEITEEELAQREDFRGVLTCTIDPRDAKDFDDALSFRSLPEGGYEVGVHIADVSHYVQPG 323
Query: 559 TALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW 618
+ +D EA R+TSVY++ R IPMLP LS + SL P D+ A+S + L+ +
Sbjct: 324 SIIDDEAYKRATSVYLVDRTIPMLPERLSNFLCSLRPDEDKYAYSCIFSLDEEAQLRSAR 383
Query: 619 IGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVS 678
I RTVIRS + +YE AQ+II+ G+G D +I +L+ ++
Sbjct: 384 IARTVIRSQRRFTYEEAQEIIE----------TGKG-----------DHAEAILTLHRLA 422
Query: 679 KILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVI 738
+ L+ +RF G++ + + F DE G P + + + L EEFMLLAN+T AE I
Sbjct: 423 QKLRARRFEVGSIAFDRPEVRFELDEEGKPLSVYIKESKPAHQLIEEFMLLANRTVAERI 482
Query: 739 A--------------RAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDT-SSSGQFHQ 783
A R + + R H AP+ KLR + + G +L S +
Sbjct: 483 AEPARKDISPALRLGRGGKPAFVYRIHEAPDEEKLRSLADYVRRFGYKLKVEGGSSVIAK 542
Query: 784 SLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSP 843
SL +K D+L A R M A Y T GHY L F YTHFTSP
Sbjct: 543 SLNALLADIKGK-PEEDMLTMLAIRSMAKARYTT-------THIGHYGLGFDSYTHFTSP 594
Query: 844 LRRYPDLVVHRTLNAAL 860
+RRYPDL+VHR L L
Sbjct: 595 IRRYPDLMVHRLLTRYL 611
>gi|404406212|ref|ZP_10997796.1| RNAse R [Alistipes sp. JC136]
Length = 746
Score = 236 bits (602), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 145/434 (33%), Positives = 215/434 (49%), Gaps = 37/434 (8%)
Query: 438 ELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV 497
E V RI +W S P ++ G G + +++AIL E + F PE +
Sbjct: 189 EKVVVRIVDWQPGSKSPVGELVERLGMAGNNDTEMHAILAEYELPYR-FEPEIEEAAEAI 247
Query: 498 PWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLP 557
V E+ R+D R FT+DP+ A D DDALS+ ++ DG+ +GVHIADV+++V P
Sbjct: 248 DARVTGREIAERRDFRQVTTFTVDPADAKDFDDALSVRKIKDGVWEIGVHIADVTHYVRP 307
Query: 558 GTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR 617
+ +D EA R TSVY++ R +PMLP LS E+ SL P L FS + LN D+++
Sbjct: 308 HSVIDDEAVERGTSVYLVDRTVPMLPERLSNELCSLRPHETSLCFSAVFTLNENLDILEE 367
Query: 618 WIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEV 677
W GRTVI S + +Y AQ+II+ G G D + +L +
Sbjct: 368 WFGRTVIHSDRRFTYAEAQEIIE----------TGRG-----------DYAEEVLTLNRL 406
Query: 678 SKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEV 737
++ L+ +RF +GA+ + + F DE G P +++ N + EEFMLLAN+ AE
Sbjct: 407 AQALRAERFKNGAISFDREEVKFRLDENGKPLGVYFKEQKESNQMIEEFMLLANRRVAEF 466
Query: 738 IARAFPDSA-------LLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQARE 790
+ +S + R H +P+ KL F F + G + + + + +
Sbjct: 467 CGKRRTESGRTAERTMVYRVHDSPSEEKLDRFRQFILRFGHIFKATKGRAVAKEMNKLFK 526
Query: 791 KLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDL 850
++K + + A R M A Y + GHY LAFP YTHFTSP+RRYPD+
Sbjct: 527 QIKGT-TEENAVSTMAVRSMAKAYYTTD-------NIGHYGLAFPYYTHFTSPIRRYPDM 578
Query: 851 VVHRTLNAALEAEK 864
+VHR L L K
Sbjct: 579 MVHRLLARYLAGGK 592
>gi|241950149|ref|XP_002417797.1| exosome complex exonuclease subunit, putative; ribosomal RNA
processing protein, putative [Candida dubliniensis CD36]
gi|223641135|emb|CAX45512.1| exosome complex exonuclease subunit, putative [Candida dubliniensis
CD36]
Length = 998
Score = 236 bits (602), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 212/723 (29%), Positives = 326/723 (45%), Gaps = 113/723 (15%)
Query: 160 FAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEGD 219
F ++S + ++ G ++ + V+++N L+ + + +LI G NRA D
Sbjct: 250 FPEYYSNARIMAGIKNGTLYQGILNVSSYNYLQGEVSVPAFKKPLLIQGSKNLNRAFNSD 309
Query: 220 FVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCTLL 279
V+++ L K K +++I+E+ + N D + VD+ S
Sbjct: 310 SVIVE-----LLPKDKWKEPSTTIIEEGAIGANDNAADGD----EDDVDIEETAS----- 355
Query: 280 SEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSA 339
S+K + D + A QE I KV S+ D +RL
Sbjct: 356 SKKSVISDKERILLA--QEAI--------------------KVIGSKNED-----KRL-- 386
Query: 340 MISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDRE 399
+PT ++V ++ RS W Y G + SS+++ D+
Sbjct: 387 --------QPTAKIVGVMRRS--------------WRYYVG------QIAPSSVNLDDKT 418
Query: 400 YIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVL 459
H V+L+ I+ R + + +V +D W S +P H +
Sbjct: 419 ------GHAAKNCFVILMDPKLPKIRIRTRKAREYLGQRIVVV-VDSWPVNSRYPNGHFV 471
Query: 460 HVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVP--WEVPQ------EELLSRKD 511
G E + A+L E+ + FS L CLP W VP +L R D
Sbjct: 472 RALGEIESAEAETEALLLEHDVEYRPFSKNVLDCLPQEGDNWVVPDITNTEDPQLQKRVD 531
Query: 512 LRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTS 571
LR+ + +IDP D+DDAL ++L +G VGVHIADV++FV P T LD E R TS
Sbjct: 532 LRDKLVCSIDPPNCVDIDDALHAKQLPNGNYEVGVHIADVTHFVKPNTPLDQEGASRGTS 591
Query: 572 VYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLS 631
VY++ ++I MLP LL + SL P VDR AFS+ W+++ ++++ +++I+S S
Sbjct: 592 VYLVDKRIDMLPQLLGTNLCSLKPFVDRFAFSVIWEVDEDANIINVNYMKSIIKSRQAFS 651
Query: 632 YEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGAL 691
YE AQ ID P + D+ +S++ L ++SK LK KR GAL
Sbjct: 652 YEQAQLRIDD--------------PS-----QQDDLTKSMRILLKLSKKLKQKRLDAGAL 692
Query: 692 RLENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRR 750
L + + V + E P + + + N L EEFML AN + A I A+P +A+LRR
Sbjct: 693 NLASPEVKVHMDSETSDPQEVEIKKLLETNSLVEEFMLFANISVARKIYDAYPQTAMLRR 752
Query: 751 HPAPNMRKLREFEAFCS--KHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YAT 807
H AP + K G+ + SS SL++ + D Y F+ L+ +T
Sbjct: 753 HAAPPATNFETLNDMLNVRKDGMSISLESSKALADSLDRCIDP-NDKY--FNTLVRIMST 809
Query: 808 RPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYW 867
R M A YF SG + ++ HY LA +YTHFTSP+RRY D+V HR L A+ E L
Sbjct: 810 RCMMAAEYFPSGSY-GYPEFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYENLDL 868
Query: 868 KHR 870
HR
Sbjct: 869 SHR 871
>gi|373458756|ref|ZP_09550523.1| ribonuclease R [Caldithrix abyssi DSM 13497]
gi|371720420|gb|EHO42191.1| ribonuclease R [Caldithrix abyssi DSM 13497]
Length = 740
Score = 236 bits (601), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 168/518 (32%), Positives = 256/518 (49%), Gaps = 77/518 (14%)
Query: 347 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 406
KR G V +++R R+ IVG + N +++Y + P
Sbjct: 124 KRFEGFVRRVVKRF--REFIVGTYHRNPYYSY------------------------VVPD 157
Query: 407 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 466
PK + +++ D + L+ D + V + + W + P+ ++ + G
Sbjct: 158 DPKVYRDIIVAPD------RSLDAKDG----QKVIVKFERWERDEHNPEGTIIEILGDKD 207
Query: 467 EVEPQINAILYENAICCSGFSPESLSC-LPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 525
I +I Y + PE++ P ++ +L R DLRN FTIDP A
Sbjct: 208 TPGVDIVSIAYSFNLPIR--FPEAVEKDAREAPEKITAADLKGRLDLRNEVCFTIDPHDA 265
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
D DDA+S++ L +G +GVHIADVS++V P TALD EA R TSVYM+ R +PMLP
Sbjct: 266 KDFDDAVSLKLLDNGNFELGVHIADVSHYVKPDTALDKEAYRRGTSVYMVDRVVPMLPER 325
Query: 586 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 645
LS ++ SL P DRL FS ++N G+VV+ I +VI S + SYE QDI+DGK D
Sbjct: 326 LSNQLCSLRPNEDRLTFSCIMEINRKGEVVNYKIAPSVINSNRRFSYEEVQDILDGKTDD 385
Query: 646 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEY 705
++++++ + +L E IL +KRFT+G + E + F+ DE
Sbjct: 386 -----------------PYAEILKQMDALRE---ILMNKRFTEGGIDFETPEVKFVLDEK 425
Query: 706 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSA-----LLRRHPAPNMRKLR 760
G P + V R + + L EEFML+ANKT A+ I + P+ + R H P+ K+
Sbjct: 426 GKPVEIVPQKRLNSHRLVEEFMLIANKTVAQHIKKISPNKQAPLPFIYRVHEKPDEEKMN 485
Query: 761 EFEAFCSKHGLQLD--TSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCS 818
F F S + + ++ Q+L + + K++ ++ ++ A R M A Y
Sbjct: 486 RFFNFLSAMRVPFKPVKRVTSRYLQNLLASIKGTKEEVIIEEV----ALRSMMKAVY--- 538
Query: 819 GDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTL 856
+ + GH+ L F YTHFTSP+RRYPDLVVHR L
Sbjct: 539 ----SEQNIGHFGLGFKDYTHFTSPIRRYPDLVVHRLL 572
>gi|328725480|ref|XP_003248494.1| PREDICTED: exosome complex exonuclease RRP44-like [Acyrthosiphon
pisum]
Length = 518
Score = 235 bits (600), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 141/362 (38%), Positives = 207/362 (57%), Gaps = 25/362 (6%)
Query: 504 EELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDI 563
++ + RKD R+ I ++DP TD+DDAL L +G +VGVHIADV++FV PGTA+D+
Sbjct: 6 QDFVGRKDFRDLDICSVDPPGCTDIDDALHCMPLDNGNFQVGVHIADVTHFVKPGTAIDL 65
Query: 564 EAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTV 623
EA R+T+VY+ R+I M+P LLS + SL G +RLAFS W++ D+V+ ++V
Sbjct: 66 EASQRATTVYLTGRRIDMVPGLLSSNLCSLRGGEERLAFSCVWEMTPNADIVNSTYTKSV 125
Query: 624 IRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKD 683
I+S ++Y+ AQ IID D N++ G ++ L + +KILK
Sbjct: 126 IKSKAAMTYDQAQLIID---DQNQDNSIALG----------------LRQLNKFAKILKK 166
Query: 684 KRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAF 742
+R GAL L + + FL D E P D + ++ N + EEFMLLAN A+ I F
Sbjct: 167 RRIEAGALVLASPEIRFLVDNETRDPLDVEVKQLKETNSMVEEFMLLANVEVAKKIYSDF 226
Query: 743 PDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDIL 802
P+ A+LRRHP P + G++L+ +S SL++A +K D F+ +
Sbjct: 227 PEFAVLRRHPKPPPSNFESLIKAAAHLGVELNVDTSRDLANSLDKA---VKLDNPFFNTM 283
Query: 803 IN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 861
+ ATR M A YF SG K ++ HY LA P+YTHFTSP+RRY D++VHR L ++
Sbjct: 284 LRILATRCMLQAVYFASGT-KTYDEFLHYGLAAPIYTHFTSPIRRYADVMVHRLLAVSVA 342
Query: 862 AE 863
+
Sbjct: 343 VD 344
>gi|262341063|ref|YP_003283918.1| ribonuclease R [Blattabacterium sp. (Blattella germanica) str. Bge]
gi|262272400|gb|ACY40308.1| ribonuclease R [Blattabacterium sp. (Blattella germanica) str. Bge]
Length = 643
Score = 235 bits (600), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 151/435 (34%), Positives = 227/435 (52%), Gaps = 57/435 (13%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 499
V +I W +E P ++ +FG+ GE + +I ++L E I FS E
Sbjct: 108 VMVQIISWPKELKNPLGKIIKIFGKSGEYKTEIFSLLEEYGIHYE-FSKEV--------- 157
Query: 500 EVPQEELLSRK--------DLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADV 551
E +++ SRK D+RN FTIDP A D DDALSI +L+D I +GVHI+DV
Sbjct: 158 ENEAQKIFSRKISDKSIRRDMRNINTFTIDPLNAKDFDDALSIRKLNDDIWEIGVHISDV 217
Query: 552 SYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSA 611
S++V G+ LD EA RSTS+Y + + IPMLP +LS ++ SL P D+L+FS ++++S
Sbjct: 218 SHYVEEGSLLDKEAYSRSTSIYFVGKVIPMLPKILSNDLCSLQPKEDKLSFSYIFNIDSQ 277
Query: 612 GDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSI 671
G+++ W G+T+IRS + +YE Q IID K G+ + ++Y
Sbjct: 278 GEILKSWFGKTIIRSNKRFTYEEVQKIIDKK--------KGDFYEEIY------------ 317
Query: 672 KSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLAN 731
+L+ +SKIL KR +G++ LE + F DE P L D + L EEFMLLAN
Sbjct: 318 -TLFFLSKILTKKRLKNGSIDLETVEVKFHLDEKKNPISLHLEKNNDAHRLIEEFMLLAN 376
Query: 732 KTAAEVIARAF---PDSALL--RRHPAPNMRKLREFEAFCSKHGLQLDTSS-SGQFHQSL 785
+ +E ++ F P + L R H P+ +K+ + G LD + + L
Sbjct: 377 RKISEFVSLNFNGNPSNRLFIYRVHDKPDFQKIFLIKKIIEPLGYFLDFKNLKTSINCLL 436
Query: 786 EQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLR 845
++ + K + +++ N R M A Y + GHY L+F YTHFTSP+R
Sbjct: 437 KKIKGKPEQ-----NMIENLILRSMSKAKY-------STKNIGHYGLSFFYYTHFTSPIR 484
Query: 846 RYPDLVVHRTLNAAL 860
RY D++ HR L+ L
Sbjct: 485 RYSDIIAHRLLHYYL 499
>gi|422847110|ref|ZP_16893793.1| ribonuclease R [Streptococcus sanguinis SK72]
gi|325687303|gb|EGD29325.1| ribonuclease R [Streptococcus sanguinis SK72]
Length = 782
Score = 235 bits (600), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 153/440 (34%), Positives = 239/440 (54%), Gaps = 30/440 (6%)
Query: 438 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAI-LYENAICCSGFSPESLSCLP 495
E++ ID++ ++ F A ++ V G + P I+ + + E+ S F + L
Sbjct: 180 EVLKVAIDKYPTKKHDFFVASLVDVVGHVND--PGIDVLEVLESMDIVSEFPEKVLEEAE 237
Query: 496 CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFV 555
VP + +L R DLR FTID + A DLDDA+ I+RL +G +GVHIADVSY+V
Sbjct: 238 RVPEAPTESDLAGRLDLREEITFTIDGADAKDLDDAVHIKRLKNGNFELGVHIADVSYYV 297
Query: 556 LPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV 615
G+ LD EA R+TSVY+ R +PMLP LS + SLNP VDRL S ++++ G VV
Sbjct: 298 KEGSELDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPNVDRLTQSAIMEIDAKGRVV 357
Query: 616 DRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 675
I +TVI++ +++Y DII G + E + ++ ++V SI S+
Sbjct: 358 KHTITQTVIKTTFRMTYSDVNDIIAG--NQEKAE-------------QFKEIVPSIDSMV 402
Query: 676 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 735
++ +IL+ RF GAL + ++ + ++ G P D VL R + E FML+AN+T A
Sbjct: 403 QLHEILESMRFKRGALNFDTNEAKIMVNKEGRPVDIVLRQRGIAERMIESFMLVANETVA 462
Query: 736 EVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 794
E A+ P + R H P K+++F + S G+++ ++S Q+L+ E +KD
Sbjct: 463 EHFAKLNLP--FIYRIHEEPKAEKVQKFIDYASSFGIRIYGTASSMSQQALQDIMESVKD 520
Query: 795 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 854
D+L R MQ A Y + ++GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 Q-PYEDVLSMMLLRSMQQARY-------SEHNYGHYGLAAEFYTHFTSPIRRYPDLLVHR 572
Query: 855 TLNAALEAEKLYWKHRRMLP 874
+ +++++ +++P
Sbjct: 573 MVRNYGKSKEIAEHFEQVIP 592
>gi|193216324|ref|YP_001997523.1| ribonuclease R [Chloroherpeton thalassium ATCC 35110]
gi|193089801|gb|ACF15076.1| ribonuclease R [Chloroherpeton thalassium ATCC 35110]
Length = 758
Score = 235 bits (600), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 169/486 (34%), Positives = 242/486 (49%), Gaps = 72/486 (14%)
Query: 387 KKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDE 446
++NR + +PD I P++ + +KD D+ ++GD + +L
Sbjct: 186 RRNRKFMLIPDNSRI--------LPEINIKLKDSQDA-----KDGDKVVVHQLA------ 226
Query: 447 WNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEEL 506
++++ QA V + G G +I +I I + F L +P + +
Sbjct: 227 FHKDGSI-QAVVKDILGPAGSSAVEITSIARSLGIDET-FPDAVLEETRQIPETIVESVF 284
Query: 507 LSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQ 566
+R DLR +FTIDP A D DDALSIE L G VG+HIADVS+FV G+ LDIEAQ
Sbjct: 285 ENRLDLRAKSVFTIDPFDAKDFDDALSIEDLGSGKYEVGIHIADVSHFVTEGSLLDIEAQ 344
Query: 567 VRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRS 626
RSTSVY++ R IPMLP +LSE V SL P DRLA+S LN G+V+D +T+I S
Sbjct: 345 RRSTSVYLVDRVIPMLPSMLSENVCSLRPKEDRLAYSALVQLNDEGNVLDYRFEKTLINS 404
Query: 627 CCKLSYEHAQDII-DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKR 685
+ +YE AQ II GK G+F + ++ L + K+L KR
Sbjct: 405 KRRFTYEEAQKIISSGK-----------------GEFCY-----ELQLLNSLGKLLSAKR 442
Query: 686 FTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDS 745
F +G + + + F DE G P + + R + + L EEFMLLAN+ A I+ + D
Sbjct: 443 FENGGIDFDTEEIKFRLDEKGEPIELIKKIRLESHRLIEEFMLLANRLVAMHISSKYQDK 502
Query: 746 -----ALLRRHPAPNMRKLREFEAFCSKHGLQLD---------TSSSGQFHQSLEQAREK 791
++ R H +P ++ + F +K G +L+ T SS LEQ +
Sbjct: 503 KHEYPSIFRVHDSPRPERIVQLSEFVTKLGFKLELKKNALNNPTVSSKGLRSLLEQVKGS 562
Query: 792 LKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDL 850
+IL+N A R M A Y + + GH+ L F YTHFTSP+RRYPDL
Sbjct: 563 ------NVEILVNEIALRSMAKAIYH-------EKNIGHFGLGFDYYTHFTSPIRRYPDL 609
Query: 851 VVHRTL 856
+VHR L
Sbjct: 610 IVHRLL 615
>gi|262282697|ref|ZP_06060465.1| ribonuclease R [Streptococcus sp. 2_1_36FAA]
gi|262261988|gb|EEY80686.1| ribonuclease R [Streptococcus sp. 2_1_36FAA]
Length = 782
Score = 235 bits (600), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 151/419 (36%), Positives = 232/419 (55%), Gaps = 27/419 (6%)
Query: 469 EPQINAI-LYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATD 527
+P I+ + + E+ S F + L VP + +L R DLR+ FTID + A D
Sbjct: 210 DPGIDVLEVLESMDIVSEFPEKVLEEADRVPDAPTESDLEGRLDLRDEITFTIDGADAKD 269
Query: 528 LDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLS 587
LDDA+ I+RL +G +GVHIADVSY+V G+ LD EA R+TSVY+ R +PMLP LS
Sbjct: 270 LDDAVHIKRLKNGNFELGVHIADVSYYVKEGSELDKEALNRATSVYVTDRVVPMLPERLS 329
Query: 588 EEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVES 647
+ SLNP VDRL S ++++ G VV I +TVI++ +++Y DII G D E
Sbjct: 330 NGICSLNPNVDRLTQSAIMEIDAKGRVVKHTITQTVIKTTFRVTYSDVNDIIAG--DEEK 387
Query: 648 SNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGT 707
+ GQF+ +V SI S+ ++ +IL++ RF GAL + ++ + ++ G
Sbjct: 388 A-----------GQFKA--IVPSIDSMVQLHEILENMRFKRGALNFDTNEAKIMVNKEGR 434
Query: 708 PYDSVLSGREDLNFLFEEFMLLANKTAAEVIARA-FPDSALLRRHPAPNMRKLREFEAFC 766
P D VL R + E FML+AN+T AE A+ P + R H P K+++F +
Sbjct: 435 PVDIVLRQRGIAERMIESFMLVANETVAEHFAKLNLP--FIYRIHEEPKAEKVQKFIDYA 492
Query: 767 SKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTD 826
S G+++ ++S Q+L++ + +KD D+L R MQ A Y + +
Sbjct: 493 SSFGIRIYGTASSMSQQALQEIMKAVKDQ-PYEDVLSMMLLRSMQQARY-------SEHN 544
Query: 827 WGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGR 885
GHY LA YTHFTSP+RRYPDL+VHR + +++++ +++P+ ++ R R
Sbjct: 545 HGHYGLAAEFYTHFTSPIRRYPDLLVHRMVRDYGKSKEIAAHFEQVIPEIANQSSSRER 603
>gi|261200052|ref|XP_002626427.1| cell wall biogenesis protein phosphatase Ssd1 [Ajellomyces
dermatitidis SLH14081]
gi|239594635|gb|EEQ77216.1| cell wall biogenesis protein phosphatase Ssd1 [Ajellomyces
dermatitidis SLH14081]
Length = 1418
Score = 235 bits (599), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 161/523 (30%), Positives = 256/523 (48%), Gaps = 39/523 (7%)
Query: 351 GRVVSIIERSPRR--DGIVGFLN-VNQWFNYKGGSRKDAKKNRSSLSVPDRE-----YIQ 402
G VV++IER + G +G L +Q K + + A++ S DR+ +
Sbjct: 631 GHVVAVIERVAGQMFAGSLGLLRPSSQATKEKQEAERQAREGGHSRHHHDRQQEKPKIVW 690
Query: 403 LTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVF 462
PT + P + + + P + E A + A I W S P ++
Sbjct: 691 FKPTDKRVPLIAIPTEQAP----RDFVEKHADYANNIFVACIKRWPITSLHPFGTLVEQL 746
Query: 463 GRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEE---LLSRKDLRNFCIFT 519
G G ++ + +A+L +N FS L + W V E L +R+D R+ FT
Sbjct: 747 GAMGNLKVETDALLRDNNFASDEFSEAVLKNVGFEKWSVKDEGEALLANRRDFRDETTFT 806
Query: 520 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 579
IDP+ +LDDA+ ++ LSDG VG+H+ADV++F+ + +D EA+ R T VY++ R +
Sbjct: 807 IDPNGYKELDDAIHVKSLSDGKVEVGIHVADVAHFIKSNSLVDREAKKRGTGVYLMNRVV 866
Query: 580 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV--DRWIGRTVIRSCCKLSYEHAQD 637
M+P L+ E+ SL PG +RL S+ + +NSA V + WIG+ VI+S KL+Y+
Sbjct: 867 NMIPPRLATEICSLLPGEERLTVSVVFQVNSATGSVEGEPWIGKGVIKSSGKLTYDEVDA 926
Query: 638 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 697
++ G FDVE L+G V IK+L++++ + R + + + +
Sbjct: 927 VLSGNFDVE-----------LHGA-----TVEDIKTLHDIAIKFRRARSGNRSSNIPALR 970
Query: 698 PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMR 757
++ D+ P + + + L EE AN A+ + A PD A LRR PN R
Sbjct: 971 LLYQLDDENVPVEQNIFDTTPAHELIEELSHKANSFVAKKLLSALPDKAFLRRQAPPNFR 1030
Query: 758 KLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFC 817
+L+ F ++ G +D +SSG SL Q +D + + + MQ A Y+
Sbjct: 1031 RLKTFVDRMTRLGYDIDPTSSGTLQTSLFQI-----EDVDIRKGMETLLLKAMQRAKYYV 1085
Query: 818 SGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
+G+ +D HY L PVYTHFT+P RRY D++VHR L A L
Sbjct: 1086 AGNVTEDQRQ-HYVLNLPVYTHFTNPSRRYADIIVHRQLEAVL 1127
Score = 48.5 bits (114), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R +F P+ ++ L G + RVN NR +AY + D+ I G +NRA
Sbjct: 463 RKTLFTPYLPQASLPALLNDGQLVAGVLRVNKKNRSDAYVTTPDLDADIFICGSKDRNRA 522
Query: 216 VEGDFVLIK-VDRLSLWAK 233
+EGD V ++ +D +W++
Sbjct: 523 LEGDLVAVELLDVDEVWSQ 541
>gi|358388418|gb|EHK26011.1| hypothetical protein TRIVIDRAFT_82225 [Trichoderma virens Gv29-8]
Length = 1096
Score = 235 bits (599), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 207/735 (28%), Positives = 332/735 (45%), Gaps = 89/735 (12%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCK-IEGV-QTDVLITGIAAQN 213
R +F P+ + L G + RVN NR +AY ++G+ D+ I G +N
Sbjct: 150 RKTLFTPYLPQATLPALLGDGQLVSGILRVNKKNRSDAYVTTLDGLLDADIFICGSKDRN 209
Query: 214 RAVEGDFVLIKV-DRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYE 272
RA+EGD V I++ D +W G + + K + D++
Sbjct: 210 RALEGDLVAIELLDVDEVW-----------------------GQKREKEEKKKRKDITDT 246
Query: 273 YSNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMN 332
S T + +D+S+ I R G P T+K + + +G +
Sbjct: 247 RSGSTNQGSQASGQNDESNPP---DGAIRRRGSLR---QRP-----TQKKNDDVEVEGQS 295
Query: 333 AIERLSAMISSYPTKRPTGRVVSIIERSPRR--DGIVGFLN-VNQWFNYKGGSRKDAKKN 389
+ I+ G VV++IER + G +G L +Q K + + A++
Sbjct: 296 LLLVEEEEINDEQKPLYAGHVVAVIERVAGQMFSGTLGLLRPSSQATKEKQEAERAAREG 355
Query: 390 RSSLSVPDRE-----YIQLTPTHPKYPKMVVLVKDLP-DSIKKRLEEGDATIEMELVAAR 443
+S S R+ + PT + P + + + P D ++K + D + A
Sbjct: 356 GNSRSNDGRQQDKPKIVWFKPTDKRVPLIAIPTEQAPRDFVEKHQDYAD-----RIFVAC 410
Query: 444 IDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQ 503
I W S P ++ GR G+++ + +A+L +N FS L + W + Q
Sbjct: 411 IKRWPITSLHPFGTLVEQLGRMGDLKVETDALLRDNNFSSDEFSEAVLRSVGLQDWSLAQ 470
Query: 504 EE---LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 560
E+ + SR+D R+ IFTID + +++L +A+ + SDG +G+H+ DV++FV P +
Sbjct: 471 EDEAAIASRRDYRDEKIFTIDFNGSSELGNAVHVTSRSDGKIDIGIHVPDVTHFVKPNSL 530
Query: 561 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV---DR 617
+D EA+ R T+V+++ R MLP LS E+ SL PG +RL S+ + +N V D
Sbjct: 531 VDREAKKRGTAVHLINRFCAMLPPKLSGELCSLVPGEERLTVSVVFTVNPVNGAVAEGDS 590
Query: 618 WIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDV-VRSIKSLYE 676
W+G+++I+S K+S DI D + F+ + V + +I+ L+
Sbjct: 591 WVGKSIIKSTGKVSLS---DIDKALTDAST--------------FDNASVPINTIQILHA 633
Query: 677 VSKILKDKRFTDGALRLENSKPVFLF----DEYGTPYDSVLSGREDLNFLFEEFMLLANK 732
V++ ++ R G+ E P+ L DE ++ E L L EE M AN
Sbjct: 634 VAQKFREARLGAGS---EPIAPLRLLQQLDDENPQVQHNIFDSTEALE-LVEELMHKANS 689
Query: 733 TAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKL 792
A+ +A PD ALLRR APN R+L+ F + G +D S SG SL +
Sbjct: 690 YVAQRLAEGLPDKALLRRQAAPNPRRLQTFVERMTALGYDIDASGSGALQNSLFKV---- 745
Query: 793 KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 852
DD L + + MQ A YF +G W HY L P+YTHFT+P RRY DL+V
Sbjct: 746 -DDADLRKGMETVLLKSMQRAKYFIAGKTAKIV-WPHYTLNLPLYTHFTNPTRRYADLIV 803
Query: 853 HRTLNAALEAEKLYW 867
HR L A L K+ +
Sbjct: 804 HRQLEAVLSEGKIEF 818
>gi|367037711|ref|XP_003649236.1| hypothetical protein THITE_2107690 [Thielavia terrestris NRRL 8126]
gi|346996497|gb|AEO62900.1| hypothetical protein THITE_2107690 [Thielavia terrestris NRRL 8126]
Length = 1380
Score = 235 bits (599), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 198/732 (27%), Positives = 328/732 (44%), Gaps = 83/732 (11%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEG--VQTDVLITGIAAQN 213
R +F P+ + L G + RVN NR +AY + + D+ I G +N
Sbjct: 421 RKTLFTPYLPQATLPALLGDGQLVSGILRVNKKNRSDAYVSTQDGLLDADIFICGSKDRN 480
Query: 214 RAVEGDFVLIKV-DRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYE 272
RA+EGD V +++ D +WA+ + + ++ S G S+V
Sbjct: 481 RALEGDLVAVELLDVDEVWAQKREKEEKKKRKDITD-------TRSGSTAGTSQV----- 528
Query: 273 YSNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMN 332
G + +D+ + E I R G T+K + + +G +
Sbjct: 529 ----------GGNGNDNDAGEGG----IRRRGS--------LRQRPTQKKNDDVEVEGQS 566
Query: 333 AIERLSAMISSYPTKRPTGRVVSIIERSPRR--DGIVGFLN-VNQWFNYKGGSRKDAK-- 387
+ IS G +V++IER + G +G L +Q K + + A+
Sbjct: 567 LLLVEEEEISDEQKPLYAGHIVAVIERVAGQMFSGTLGLLRPSSQATKEKQEAERAARDG 626
Query: 388 ---KNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLP-DSIKKRLEEGDATIEMELVAAR 443
+++ + + + PT + P + + + P D ++K E D ++ A
Sbjct: 627 NLARHQEPRAQEKPKIVWFKPTDKRVPLIAIPTEQAPRDFVEKHQEYAD-----QIFVAC 681
Query: 444 IDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQ 503
I W S P ++ G+ G+++ + +A+L +N FS L + W + +
Sbjct: 682 IKRWPITSLHPFGTLVEKLGKMGDLKVETDALLRDNNFSSDEFSDAVLRSVGLQDWTIAK 741
Query: 504 EE---LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 560
E+ + +R+D RN +FT+D + +L + + I+ L DG VG+H+ DV++FV P +
Sbjct: 742 EDEAAIAARRDFRNEKVFTLDLDGSAELGNGVHIKSLPDGKIEVGIHVPDVTHFVRPNSL 801
Query: 561 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV---DR 617
+D EA+ R T+V+++ R MLP LS EV SL P DRL S+ + +N V D
Sbjct: 802 VDREAKKRGTAVHLVNRFCAMLPPKLSSEVCSLTPKEDRLTVSVVFHVNPHTGAVTEGDT 861
Query: 618 WIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVV--RSIKSLY 675
WIG+ +++S KLS + D SN G F DVV + ++ L
Sbjct: 862 WIGKGIVKSGGKLSLS--------QMDQALSNAAG---------FT-HDVVEAKDVQILN 903
Query: 676 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 735
+++ ++ R G + + + D+ P L + EE M AN A
Sbjct: 904 VLTQKFREARLGAGGEPIAPLRLLQQLDDENIPVRHSLFDTTPATEMVEELMHKANAYVA 963
Query: 736 EVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDD 795
+ +ARA P+ ALLRRH APN R+L+ F + G ++D SSSG SL + +D
Sbjct: 964 QRLARALPEKALLRRHAAPNPRRLQTFVERMTALGYEIDPSSSGTLQNSLFRV-----ED 1018
Query: 796 YVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRT 855
+ + + MQ A YF +G W HY+L P+YTHFTSP RRY D++VHR
Sbjct: 1019 SDIRKGMETLLLKSMQRAKYFIAGKTAKHL-WAHYSLNLPLYTHFTSPTRRYADILVHRQ 1077
Query: 856 LNAALEAEKLYW 867
L + L K+ +
Sbjct: 1078 LESVLSEGKIEY 1089
>gi|239608026|gb|EEQ85013.1| cell wall biogenesis protein phosphatase Ssd1 [Ajellomyces
dermatitidis ER-3]
Length = 1384
Score = 235 bits (599), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 161/523 (30%), Positives = 256/523 (48%), Gaps = 39/523 (7%)
Query: 351 GRVVSIIERSPRR--DGIVGFLN-VNQWFNYKGGSRKDAKKNRSSLSVPDRE-----YIQ 402
G VV++IER + G +G L +Q K + + A++ S DR+ +
Sbjct: 597 GHVVAVIERVAGQMFAGSLGLLRPSSQATKEKQEAERQAREGGHSRHHHDRQQEKPKIVW 656
Query: 403 LTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVF 462
PT + P + + + P + E A + A I W S P ++
Sbjct: 657 FKPTDKRVPLIAIPTEQAP----RDFVEKHADYANNIFVACIKRWPITSLHPFGTLVEQL 712
Query: 463 GRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEE---LLSRKDLRNFCIFT 519
G G ++ + +A+L +N FS L + W V E L +R+D R+ FT
Sbjct: 713 GAMGNLKVETDALLRDNNFASDEFSEAVLKNVGFEKWSVKDEGEALLANRRDFRDETTFT 772
Query: 520 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 579
IDP+ +LDDA+ ++ LSDG VG+H+ADV++F+ + +D EA+ R T VY++ R +
Sbjct: 773 IDPNGYKELDDAIHVKSLSDGKVEVGIHVADVAHFIKSNSLVDREAKKRGTGVYLMNRVV 832
Query: 580 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV--DRWIGRTVIRSCCKLSYEHAQD 637
M+P L+ E+ SL PG +RL S+ + +NSA V + WIG+ VI+S KL+Y+
Sbjct: 833 NMIPPRLATEICSLLPGEERLTVSVVFQVNSATGSVEGEPWIGKGVIKSSGKLTYDEVDA 892
Query: 638 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 697
++ G FDVE L+G V IK+L++++ + R + + + +
Sbjct: 893 VLSGNFDVE-----------LHGA-----TVEDIKTLHDIAIKFRRARSGNRSSNIPALR 936
Query: 698 PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMR 757
++ D+ P + + + L EE AN A+ + A PD A LRR PN R
Sbjct: 937 LLYQLDDENVPVEQNIFDTTPAHELIEELSHKANSFVAKKLLSALPDKAFLRRQAPPNFR 996
Query: 758 KLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFC 817
+L+ F ++ G +D +SSG SL Q +D + + + MQ A Y+
Sbjct: 997 RLKTFVDRMTRLGYDIDPTSSGTLQTSLFQI-----EDVDIRKGMETLLLKAMQRAKYYV 1051
Query: 818 SGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
+G+ +D HY L PVYTHFT+P RRY D++VHR L A L
Sbjct: 1052 AGNVTEDQRQ-HYVLNLPVYTHFTNPSRRYADIIVHRQLEAVL 1093
Score = 48.5 bits (114), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R +F P+ ++ L G + RVN NR +AY + D+ I G +NRA
Sbjct: 429 RKTLFTPYLPQASLPALLNDGQLVAGVLRVNKKNRSDAYVTTPDLDADIFICGSKDRNRA 488
Query: 216 VEGDFVLIK-VDRLSLWAK 233
+EGD V ++ +D +W++
Sbjct: 489 LEGDLVAVELLDVDEVWSQ 507
>gi|325954642|ref|YP_004238302.1| ribonuclease R [Weeksella virosa DSM 16922]
gi|323437260|gb|ADX67724.1| ribonuclease R [Weeksella virosa DSM 16922]
Length = 731
Score = 235 bits (599), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 155/482 (32%), Positives = 237/482 (49%), Gaps = 51/482 (10%)
Query: 438 ELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV 497
E V + EW + P + V G + ++++IL E + F E + +
Sbjct: 207 EKVVVELLEWPDGFDSPIGSITEVLGNPENSDVEMHSILLEFGLP-EAFPEEVEAEAQQL 265
Query: 498 PWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLP 557
++ + E+ R+D+R+ FTIDP A D DDALSI+ L +G +GVHIADV+++V P
Sbjct: 266 DTKIDENEVKKRRDMRDILTFTIDPKDAKDFDDALSIQPLENGNWEIGVHIADVTHYVQP 325
Query: 558 GTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR 617
GT +D EA R+TSVY++ R +PMLP +LS V SL P D+ FS ++L + GDVV
Sbjct: 326 GTLIDQEAYKRATSVYLVDRVVPMLPEILSNNVCSLRPNEDKYTFSGVFELTNEGDVVKS 385
Query: 618 WIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEV 677
W GRT I S + SYE AQ++I+GK D I++L +
Sbjct: 386 WFGRTAIHSNHRFSYEEAQELIEGK---------------------TGDYQEEIRTLDRL 424
Query: 678 SKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEV 737
+K L+ +R +GA+ + + F D+ P +D N L EEFMLL N+ +E
Sbjct: 425 AKKLRAQRMKEGAINFDKIEVKFQLDQDNNPTGVFFKISKDSNHLIEEFMLLCNRKVSEF 484
Query: 738 IA----RAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQ--AREK 791
++ + + + R H P+ KL + + F + G +L+ + +S+ + A K
Sbjct: 485 VSLEKGKENGRTYIYRIHDEPDPDKLLDLKKFVIQFGYELEIGERKKTIRSMNRLLADVK 544
Query: 792 LKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 851
K + + + L A R M A Y + GHY LAF YTHFTSP+RRYPD++
Sbjct: 545 GKPEENMIETL---AMRSMSKAKYSTE-------NIGHYGLAFDYYTHFTSPIRRYPDMI 594
Query: 852 VHRTL-----------NAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESL 900
HR L A E + L+ R L RE + +F+ + + E+
Sbjct: 595 AHRLLQDFLDKKSSPPQATYEDKCLHCSSREKLASEAERESI--KFMQVKYMQEFVGENF 652
Query: 901 EG 902
EG
Sbjct: 653 EG 654
>gi|327357528|gb|EGE86385.1| cell wall biogenesis protein phosphatase Ssd1 [Ajellomyces
dermatitidis ATCC 18188]
Length = 1407
Score = 235 bits (599), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 161/523 (30%), Positives = 256/523 (48%), Gaps = 39/523 (7%)
Query: 351 GRVVSIIERSPRR--DGIVGFLN-VNQWFNYKGGSRKDAKKNRSSLSVPDRE-----YIQ 402
G VV++IER + G +G L +Q K + + A++ S DR+ +
Sbjct: 620 GHVVAVIERVAGQMFAGSLGLLRPSSQATKEKQEAERQAREGGHSRHHHDRQQEKPKIVW 679
Query: 403 LTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVF 462
PT + P + + + P + E A + A I W S P ++
Sbjct: 680 FKPTDKRVPLIAIPTEQAP----RDFVEKHADYANNIFVACIKRWPITSLHPFGTLVEQL 735
Query: 463 GRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEE---LLSRKDLRNFCIFT 519
G G ++ + +A+L +N FS L + W V E L +R+D R+ FT
Sbjct: 736 GAMGNLKVETDALLRDNNFASDEFSEAVLKNVGFEKWSVKDEGEALLANRRDFRDETTFT 795
Query: 520 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 579
IDP+ +LDDA+ ++ LSDG VG+H+ADV++F+ + +D EA+ R T VY++ R +
Sbjct: 796 IDPNGYKELDDAIHVKSLSDGKVEVGIHVADVAHFIKSNSLVDREAKKRGTGVYLMNRVV 855
Query: 580 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV--DRWIGRTVIRSCCKLSYEHAQD 637
M+P L+ E+ SL PG +RL S+ + +NSA V + WIG+ VI+S KL+Y+
Sbjct: 856 NMIPPRLATEICSLLPGEERLTVSVVFQVNSATGSVEGEPWIGKGVIKSSGKLTYDEVDA 915
Query: 638 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 697
++ G FDVE L+G V IK+L++++ + R + + + +
Sbjct: 916 VLSGNFDVE-----------LHGA-----TVEDIKTLHDIAIKFRRARSGNRSSNIPALR 959
Query: 698 PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMR 757
++ D+ P + + + L EE AN A+ + A PD A LRR PN R
Sbjct: 960 LLYQLDDENVPVEQNIFDTTPAHELIEELSHKANSFVAKKLLSALPDKAFLRRQAPPNFR 1019
Query: 758 KLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFC 817
+L+ F ++ G +D +SSG SL Q +D + + + MQ A Y+
Sbjct: 1020 RLKTFVDRMTRLGYDIDPTSSGTLQTSLFQI-----EDVDIRKGMETLLLKAMQRAKYYV 1074
Query: 818 SGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
+G+ +D HY L PVYTHFT+P RRY D++VHR L A L
Sbjct: 1075 AGNVTEDQRQ-HYVLNLPVYTHFTNPSRRYADIIVHRQLEAVL 1116
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R +F P+ ++ L G + RVN NR +AY + D+ I G +NRA
Sbjct: 452 RKTLFTPYLPQASLPALLNDGQLVAGVLRVNKKNRSDAYVTTPDLDADIFICGSKDRNRA 511
Query: 216 VEGDFVLIK-VDRLSLWAK 233
+EGD V ++ +D +W++
Sbjct: 512 LEGDLVAVELLDVDEVWSQ 530
>gi|178847337|pdb|2VNU|D Chain D, Crystal Structure Of Sc Rrp44
Length = 760
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 162/447 (36%), Positives = 226/447 (50%), Gaps = 39/447 (8%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV-- 497
+ ID W +P H + G + + A+L E+ + FS + L CLP
Sbjct: 208 IVISIDSWPTTHKYPLGHFVRDLGTIESAQAETEALLLEHDVEYRPFSKKVLECLPAEGH 267
Query: 498 ----------PWEVPQEELLS-RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGV 546
P V ++ LL+ RKDLR+ I +IDP D++DAL ++L +G VGV
Sbjct: 268 DWKAPTKLDDPEAVSKDPLLTKRKDLRDKLICSIDPPGCVDINDALHAKKLPNGNWEVGV 327
Query: 547 HIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFW 606
HIADV++FV PGTALD E R TSVY++ ++I LP LL ++ SL P VDR AFS+ W
Sbjct: 328 HIADVTHFVKPGTALDAEGAARGTSVYLVDKRIDXLPXLLGTDLCSLKPYVDRFAFSVIW 387
Query: 607 DLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSD 666
+L+ + ++V+ ++VIRS SYE AQ ID K ++ L G
Sbjct: 388 ELDDSANIVNVNFXKSVIRSREAFSYEQAQLRIDDK---TQNDELTXG------------ 432
Query: 667 VVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEE 725
++L ++S LK KR GAL L + + V E P + + N L EE
Sbjct: 433 ----XRALLKLSVKLKQKRLEAGALNLASPEVKVHXDSETSDPNEVEIKKLLATNSLVEE 488
Query: 726 FMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF-EAFCSKHGLQLDTSSSGQFHQS 784
F LLAN + A I AFP +A LRRH AP E ++ + SS S
Sbjct: 489 FXLLANISVARKIYDAFPQTAXLRRHAAPPSTNFEILNEXLNTRKNXSISLESSKALADS 548
Query: 785 LEQAREKLKDDYVLFDILINY-ATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSP 843
L++ + +D Y F+ L+ +TR A YF SG + D+ HY LA +YTHFTSP
Sbjct: 549 LDRCVDP-EDPY--FNTLVRIXSTRCXXAAQYFYSGAYS-YPDFRHYGLAVDIYTHFTSP 604
Query: 844 LRRYPDLVVHRTLNAALEAEKLYWKHR 870
+RRY D+V HR L A+ E L HR
Sbjct: 605 IRRYCDVVAHRQLAGAIGYEPLSLTHR 631
>gi|339640975|ref|ZP_08662419.1| ribonuclease R [Streptococcus sp. oral taxon 056 str. F0418]
gi|339454244|gb|EGP66859.1| ribonuclease R [Streptococcus sp. oral taxon 056 str. F0418]
Length = 782
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 154/441 (34%), Positives = 238/441 (53%), Gaps = 30/441 (6%)
Query: 438 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAI-LYENAICCSGFSPESLSCLP 495
E++ ID++ ++ F A ++ V G + P I+ + + E+ S F + L
Sbjct: 180 EVLKVAIDKYPTKKHDFFVASLVDVVGHVND--PGIDVLEVLESMDIVSDFPEKVLEEAE 237
Query: 496 CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFV 555
VP + +L R DLR FTID + A DLDDA+ I+RL +G +GVHIADVSY+V
Sbjct: 238 RVPDAPTERDLAGRLDLREEITFTIDGADAKDLDDAVHIKRLKNGNFELGVHIADVSYYV 297
Query: 556 LPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV 615
G+ LD EA R+TSVY+ R +PMLP LS + SLNP VDRL S ++++ G VV
Sbjct: 298 KEGSELDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPNVDRLTQSAIMEIDAKGRVV 357
Query: 616 DRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 675
I +TVI++ +++Y DII G D E + ++ +V SI S+
Sbjct: 358 KHSITQTVIKTTFRMTYSDVNDIIAG--DQEKAE-------------QFKAIVPSIDSMV 402
Query: 676 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 735
+ +IL+ RF GAL + ++ + ++ G P D VL R + E FML+AN+T A
Sbjct: 403 RLHEILESMRFKRGALNFDTNEAKIMVNKEGRPVDIVLRQRGIAERMIESFMLVANETVA 462
Query: 736 EVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 794
E A+ P + R H P K+++F + S G+++ ++S Q+L++ E +KD
Sbjct: 463 EHFAKLNLP--FIYRIHEEPKAEKVQKFIDYASSFGIRIYGTASSMSQQALQEIMEAVKD 520
Query: 795 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 854
D+L R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 Q-PYEDVLSMMLLRSMQQARY-------SEHNHGHYGLAAEFYTHFTSPIRRYPDLLVHR 572
Query: 855 TLNAALEAEKLYWKHRRMLPK 875
+ +++++ +++P+
Sbjct: 573 MVRDYGKSKEIAEHFEQVIPE 593
>gi|225560053|gb|EEH08335.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 1414
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 165/527 (31%), Positives = 260/527 (49%), Gaps = 47/527 (8%)
Query: 351 GRVVSIIERSPRR--DGIVGFLN-VNQWFNYKGGSRKDAKKNRSSLSVPDRE-----YIQ 402
G VV++IER + G +G L +Q K + + A+ S DR+ +
Sbjct: 623 GHVVAVIERVAGQMFAGSLGLLRPSSQATKEKQEAERQARDGGHSRHHHDRQQDKPKIVW 682
Query: 403 LTPTHPKYPKMVVLVKDLP-DSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHV 461
PT + P + + + P D ++K E + + A I W S P ++
Sbjct: 683 FKPTDKRVPLIAIPTEQAPRDFVEKHAEYAN-----NIFVACIKRWPITSLHPFGTLVEQ 737
Query: 462 FGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEE---LLSRKDLRNFCIF 518
G G ++ + +A+L +N FS L + W V E L +R+D R+ F
Sbjct: 738 LGAMGNLKVETDALLRDNNFASDEFSDAVLKNVGFEKWSVKDEGEALLENRRDFRDETTF 797
Query: 519 TIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRK 578
TIDP+ +LDDA+ ++ L DG VG+H+ADV++F+ + +D EA+ R T VY++ R
Sbjct: 798 TIDPNGYKELDDAIHVKSLPDGKVEVGIHVADVAHFIKSNSLVDREAKKRGTGVYLMNRV 857
Query: 579 IPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV--DRWIGRTVIRSCCKLSYEHAQ 636
+ M+P L+ E+ SL PG +RL S+ + +NSA V + WIG+ VI+S KL+Y+
Sbjct: 858 VNMIPPRLATEICSLLPGEERLTVSVIFQVNSATGSVEGEPWIGKGVIKSSGKLTYDEVD 917
Query: 637 DIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENS 696
I++G DVE L+G IK+L +++ K RF + + + +
Sbjct: 918 AILNGNSDVE-----------LHGA-----TANDIKTLSDIASKFKKARFGNRSSNIPSL 961
Query: 697 KPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNM 756
+ ++ D+ P + + + L EE AN A+ + A PD A LRR PN+
Sbjct: 962 RLLYQLDDENVPVEQNIFNSTPAHELIEELSHKANSFVAKKLLSAIPDKAFLRRQAPPNV 1021
Query: 757 RKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYAT---RPMQLA 813
R+L+ F ++ G +D +SSG SL K++D DI T + MQ A
Sbjct: 1022 RRLQTFVDRMTRLGYDIDPTSSGTLQTSL----FKIED----VDIRKGMETLLLKAMQRA 1073
Query: 814 SYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
Y+ +G+ +D HY L PVYTHFT+P RRY D++VHR L A L
Sbjct: 1074 KYYVAGNMTEDQRQ-HYVLNLPVYTHFTNPSRRYADIIVHRQLEAVL 1119
Score = 48.9 bits (115), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R +F P+ ++ L G + RVN NR +AY + D+ I G +NRA
Sbjct: 455 RKTLFTPYLPQASLPALLNDGQLVAGILRVNKKNRSDAYVTTPDLDADIFICGSKDRNRA 514
Query: 216 VEGDFVLIK-VDRLSLWAK 233
+EGD V ++ +D +W++
Sbjct: 515 LEGDLVAVELLDVDEVWSQ 533
>gi|323351181|ref|ZP_08086837.1| ribonuclease R [Streptococcus sanguinis VMC66]
gi|322122405|gb|EFX94116.1| ribonuclease R [Streptococcus sanguinis VMC66]
Length = 782
Score = 234 bits (597), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 153/440 (34%), Positives = 239/440 (54%), Gaps = 30/440 (6%)
Query: 438 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAI-LYENAICCSGFSPESLSCLP 495
E++ ID++ ++ F A ++ V G + P I+ + + E+ S F + L
Sbjct: 180 EVLKVAIDKYPTKKHDFFVASLVDVVGHVND--PGIDVLEVLESMDIVSEFPEKVLEEAE 237
Query: 496 CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFV 555
+P + +L R DLR+ FTID + A DLDDA+ I+RL +G +GVHIADVSY+V
Sbjct: 238 RIPDAPTESDLKERLDLRDEITFTIDGADAKDLDDAVHIKRLKNGNFELGVHIADVSYYV 297
Query: 556 LPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV 615
G+ LD EA R+TSVY+ R +PMLP LS + SLNP VDRL S ++++ G VV
Sbjct: 298 KEGSELDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPNVDRLTQSAIMEIDAKGRVV 357
Query: 616 DRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 675
I +TVI++ +++Y DII G D E + ++ +V SI S+
Sbjct: 358 KHTITQTVIKTTFRMTYSDVNDIIAG--DQEKAE-------------QFKAIVPSIDSMV 402
Query: 676 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 735
++ +IL++ RF GAL + ++ + ++ G P D VL R + E FML+AN+T A
Sbjct: 403 QLHEILENMRFKRGALNFDTNEAKIMVNKEGRPVDIVLRQRGIAERMIESFMLVANETVA 462
Query: 736 EVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 794
E A+ P + R H P K+++F + S G+++ ++S Q+L+ E +KD
Sbjct: 463 ENFAKLNLP--FIYRIHEEPKAEKVQKFIDYASSFGIRIYGTASSMSQQALQDIMESVKD 520
Query: 795 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 854
D+L R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 Q-PYEDVLSMMLLRSMQQARY-------SEHNHGHYGLAAEFYTHFTSPIRRYPDLLVHR 572
Query: 855 TLNAALEAEKLYWKHRRMLP 874
+ +++++ +++P
Sbjct: 573 MVRDYGKSKEIAEHFEQVIP 592
>gi|295131900|ref|YP_003582576.1| ribonuclease R [Zunongwangia profunda SM-A87]
gi|294979915|gb|ADF50380.1| ribonuclease R [Zunongwangia profunda SM-A87]
Length = 736
Score = 234 bits (597), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 148/428 (34%), Positives = 214/428 (50%), Gaps = 21/428 (4%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 499
V D+W +++ P + V G G +I++IL + + F E +
Sbjct: 192 VLVEFDDWPKKADSPFGVITRVLGTPGHHNTEIHSILAQYGLPAD-FPEEVEEFANKIDT 250
Query: 500 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 559
+ +E+ R+D+R+ FTIDP A D DDALS +L +G +GVHIADVS+++ P T
Sbjct: 251 SISDQEIKKRRDMRDVLTFTIDPKDAKDFDDALSFRKLDNGNIELGVHIADVSHYLQPDT 310
Query: 560 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 619
LD EA R+TSVY++ R +PMLP +LS SL P ++ FS ++L+ V D+W
Sbjct: 311 ILDQEAYDRATSVYLVDRVVPMLPEILSNGACSLRPNEEKYTFSAVFELDKNAKVKDQWF 370
Query: 620 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWP-QLYGQFEWSD-VVRSIKSLYEV 677
GRTV S + +YE AQ II+ N + E + G + + +V ++ L +
Sbjct: 371 GRTVTYSDARFAYEEAQHIIE-----TMENKIPEDISIREEGSYTVDNAIVEAVLELDRL 425
Query: 678 SKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEV 737
+K ++ R +GA+ + + F DE P +D N L EEFMLLANK AE
Sbjct: 426 AKKMRSVRMREGAISFDKVEVKFHLDEENEPIGVFFKTSKDANKLIEEFMLLANKKVAEF 485
Query: 738 IARAFPDSALLRR-HPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKL--KD 794
I + P + R H PN KL + + G L+ S SL + + K
Sbjct: 486 IGKQKPKKTFVYRCHDEPNEEKLASLQTVVGRFGHSLNLSDRKSVTSSLNSLLKNVQGKK 545
Query: 795 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 854
+ L D L A R M A Y + GHY LAF YTHFTSP+RRYPD++VHR
Sbjct: 546 EQNLVDTL---AIRTMSKAYYGTE-------NIGHYGLAFEYYTHFTSPIRRYPDVMVHR 595
Query: 855 TLNAALEA 862
L L+
Sbjct: 596 LLQQYLDG 603
>gi|389634773|ref|XP_003715039.1| cell wall biogenesis protein phosphatase Ssd1 [Magnaporthe oryzae
70-15]
gi|351647372|gb|EHA55232.1| cell wall biogenesis protein phosphatase Ssd1 [Magnaporthe oryzae
70-15]
gi|440470507|gb|ELQ39574.1| hypothetical protein OOU_Y34scaffold00492g8 [Magnaporthe oryzae Y34]
gi|440488488|gb|ELQ68213.1| hypothetical protein OOW_P131scaffold00264g8 [Magnaporthe oryzae
P131]
Length = 1350
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 193/733 (26%), Positives = 331/733 (45%), Gaps = 87/733 (11%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEG--VQTDVLITGIAAQN 213
R +F P+ + L G + RVN NR +AY + + D+ I G +N
Sbjct: 407 RKTLFTPYLPQATLPALLGDGQLVSGILRVNKKNRSDAYVSTQDGLLDADIFICGSKDRN 466
Query: 214 RAVEGDFVLIKV-DRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYE 272
RA+EGD V +++ D +W G + + K + D++
Sbjct: 467 RALEGDLVAVELLDVDEVW-----------------------GQKREKEEKKKRKDITDT 503
Query: 273 YSNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMN 332
S T + + +D ++ + I R G T+K + + +G +
Sbjct: 504 RSGSTNGGNQNNANGEDGNT---GEGGIRRRGS--------LRQRPTQKKNDDVEVEGQS 552
Query: 333 AIERLSAMISSYPTKRPTGRVVSIIERSPRR--DGIVGFLNVNQWFNYKGG----SRKDA 386
+ IS G +V++IER + G +G L + + + +D
Sbjct: 553 LLLVEEEEISDEQKPLYAGHIVAVIERVAGQMFSGTLGLLRPSSQATKEKQEAERAARDG 612
Query: 387 KKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLP-DSIKKRLEEGDATIEMELVAARID 445
+++ S + + PT + P + + + P D ++K ++ D + A I
Sbjct: 613 GRHQDSRHQEKPKIVWFKPTDKRVPLIAIPTEQAPRDFVEKHMDYAD-----RIFVACIK 667
Query: 446 EWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEE 505
W S P ++ G+ G+++ + +A+L +N FS L + W + +E+
Sbjct: 668 RWPITSLHPFGTLVEQLGKMGDLKVETDALLRDNNFSSDDFSDAVLRSVGLQDWSIAKED 727
Query: 506 ---LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALD 562
+ R+D R+ FTID +T+L +A+ ++ DG +G+H+ DV++F+ P + +D
Sbjct: 728 EAAIGERRDFRDEKTFTIDIDGSTELGNAVHVKTRPDGKIEIGIHVPDVAHFIKPNSLVD 787
Query: 563 IEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV---DRWI 619
EA+ R T+V+++ R +LP L++EV SL+P +RL S+ + +N VV D WI
Sbjct: 788 REAKKRGTAVHLINRTCALLPPKLAKEVCSLDPSEERLTVSVVFQVNPHNGVVADGDTWI 847
Query: 620 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVV--RSIKSLYEV 677
G+++I+S KLS D I+ +S+ T DVV + ++ L V
Sbjct: 848 GKSIIKSGGKLSL----DEINTALSSDSAFT--------------HDVVSQKDVQILNAV 889
Query: 678 SKILKDKRFTDGALRLENSKPVFLF---DEYGTPYDSVLSGREDLNFLFEEFMLLANKTA 734
++ ++ R G E P+ LF D+ P + + ++ L EE M N
Sbjct: 890 AQKFREARLGAGG---EPIAPLRLFQQLDDENIPIEHNVFDSKEATELVEELMHKVNAAV 946
Query: 735 AEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 794
A+ +A P+ ALLRRH PN R+L+ + G +LDTSSSG SL + D
Sbjct: 947 AQRLAEGLPEKALLRRHAPPNPRRLQTIAERMNALGYELDTSSSGALQNSLFKV-----D 1001
Query: 795 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 854
+ + + + MQ A YF +G W HYAL P+YTHFTSP RRY D++VHR
Sbjct: 1002 NEDIRKGIETLLLKSMQRAKYFIAGKLAKQL-WPHYALNLPLYTHFTSPTRRYADIMVHR 1060
Query: 855 TLNAALEAEKLYW 867
L++ L K+ +
Sbjct: 1061 QLDSILSEGKVEY 1073
>gi|395536637|ref|XP_003770319.1| PREDICTED: uncharacterized protein LOC100927946 [Sarcophilus
harrisii]
Length = 1864
Score = 234 bits (596), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 192/630 (30%), Positives = 290/630 (46%), Gaps = 85/630 (13%)
Query: 151 HQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIA 210
H + IF + S E V+ L++G + + R+N EA+ D+ I G+
Sbjct: 42 HSQGKKRNIFEAYMSRENVSAGLKRGALIQGVLRINPKKYHEAFIPSPDGTRDIFIDGVV 101
Query: 211 AQNRAVEGDFVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVS 270
A+NRA+ GD V++++ W +K +DS+ KG V S
Sbjct: 102 ARNRALNGDLVVVELLPKDRWKVIK--------TDDSD-------------KGADAVTES 140
Query: 271 YEYSNCTLLSEKGIHHDDD---------SSSEAYNQEMIEREGYNYINGHHPSTSDSTEK 321
+ + D + SEA + + ER ++G +++ +
Sbjct: 141 EAAEELLETPPQQLGKRDAPDVVLEAQLNDSEAEDGQ--ERGPGALLDGAQDKGNENADA 198
Query: 322 VSSSQQN-----DGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWF 376
S+SQ N D ++++R + +VV I+E+ R GF+ +
Sbjct: 199 QSASQGNPPKAQDPDHSLQR-------------SAKVVYILEKKHSR-AATGFIKLL--- 241
Query: 377 NYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIE 436
A KN R+ +P+ + P++ V + D P R + T
Sbjct: 242 ---------ADKNSELF----RKCALFSPSDHRVPRVYVPLADCPGDFVTRSNDYART-- 286
Query: 437 MELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP- 495
L RI W E S F H+ G+ GE+EP+ IL E + + FSPE L CLP
Sbjct: 287 --LFVCRIVAWEEHSHFAVGHLAKSLGQAGEIEPETEGILMEYGVDFADFSPEVLGCLPQ 344
Query: 496 CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFV 555
+PW +P EEL R+DLR C+FTIDPSTA DLDDALS + L+DG VGVHIADVSYFV
Sbjct: 345 SLPWTIPPEELNKRRDLRKDCVFTIDPSTARDLDDALSCKPLADGSFEVGVHIADVSYFV 404
Query: 556 LPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV 615
G+ALD A R+TSVY++Q+ L L SL P +D + S L ++
Sbjct: 405 PEGSALDTVAGERATSVYLVQKVRGGLGALSGGFPPSLRPSLDAVLGSATLCLLPFFKIL 464
Query: 616 DRWIGRTVIRSCCKLSYEHAQDII---DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIK 672
D W GRT+I SC KLSYEHAQ +I D KF + P + + + ++I
Sbjct: 465 DEWFGRTIICSCTKLSYEHAQSMIEHPDRKFREDE-------LPPVSAEHPVERIHQAIL 517
Query: 673 SLYEVSKILKDKRFTDGALRLENSKPVFLFDE-YGTPYDS-VLSGREDLNFL-FEEFMLL 729
+L+ ++K L+ +RF +GALRL+ K F D+ G P + ++ NFL E+ +
Sbjct: 518 NLHSIAKQLRQQRFVNGALRLDQLKLAFTLDQDTGMPQGCHIYEYKDSNNFLPVEKVGVK 577
Query: 730 ANKTAAEVIARAFPDSALLRRHPAPNMRKL 759
A+ +S + R P+P +L
Sbjct: 578 HPGVFAKKAPNGLTESWAVSREPSPGDAQL 607
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 76/160 (47%), Gaps = 48/160 (30%)
Query: 800 DILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAA 859
++L N +RPMQ+A YFC+G KD+ + HYAL P+YTHFTSP+RR+ D++VHR L
Sbjct: 1648 EVLTNMCSRPMQMALYFCTGVLKDEAQFRHYALNVPLYTHFTSPIRRFADVLVHRLL--- 1704
Query: 860 LEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCAD 919
A SL RE LS+ D
Sbjct: 1705 -------------------------------------AASLGSREPLSLD--------TD 1719
Query: 920 ILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLFS 959
L A HCNDR++A + V++ L+ +++++ L S
Sbjct: 1720 ALQKQADHCNDRRMASKRVQELSTNLFFAVMVRESGPLES 1759
>gi|325090058|gb|EGC43368.1| cell wall biogenesis protein phosphatase Ssd1 [Ajellomyces capsulatus
H88]
Length = 1382
Score = 233 bits (595), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 165/527 (31%), Positives = 259/527 (49%), Gaps = 47/527 (8%)
Query: 351 GRVVSIIERSPRR--DGIVGFLN-VNQWFNYKGGSRKDAKKNRSSLSVPDRE-----YIQ 402
G VV++IER + G +G L +Q K + + A+ S DR+ +
Sbjct: 591 GHVVAVIERVAGQMFAGSLGLLRPSSQATKEKQEAERQARDGGHSRHHHDRQQDKPKIVW 650
Query: 403 LTPTHPKYPKMVVLVKDLP-DSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHV 461
PT + P + + + P D ++K E + + A I W S P ++
Sbjct: 651 FKPTDKRVPLIAIPTEQAPRDFVEKHAEYAN-----NIFVACIKRWPITSLHPFGTLVEQ 705
Query: 462 FGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEE---LLSRKDLRNFCIF 518
G G ++ + +A+L +N FS L + W V E L +R+D R F
Sbjct: 706 LGAMGNLKVETDALLRDNNFASDEFSDAVLKNVGFEKWSVKDEGEALLENRRDFRGETTF 765
Query: 519 TIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRK 578
TIDP+ +LDDA+ ++ L DG VG+H+ADV++F+ + +D EA+ R T VY++ R
Sbjct: 766 TIDPNGYKELDDAIHVKSLPDGKVEVGIHVADVAHFIKSNSLVDREAKKRGTGVYLMNRV 825
Query: 579 IPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV--DRWIGRTVIRSCCKLSYEHAQ 636
+ M+P L+ E+ SL PG +RL S+ + +NSA V + WIG+ VI+S KL+Y+
Sbjct: 826 VNMIPPRLATEICSLLPGEERLTVSVIFQVNSATGSVEGEPWIGKGVIKSSGKLTYDEVD 885
Query: 637 DIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENS 696
I++G DVE L+G IK+L +++ K RF + + + +
Sbjct: 886 AILNGNSDVE-----------LHGA-----TANDIKTLSDIASKFKKARFGNRSSNIPSL 929
Query: 697 KPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNM 756
+ ++ D+ P + + + L EE AN A+ + A PD A LRR PN+
Sbjct: 930 RLLYQLDDENVPVEQNIFNSTPAHELIEELSHKANSFVAKKLLSAIPDKAFLRRQAPPNV 989
Query: 757 RKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYAT---RPMQLA 813
R+L+ F ++ G +D +SSG SL K++D DI T + MQ A
Sbjct: 990 RRLQTFVDRMTRLGYDIDPTSSGTLQTSL----FKIED----VDIRKGMETLLLKAMQRA 1041
Query: 814 SYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
Y+ +G+ +D HY L PVYTHFT+P RRY D++VHR L A L
Sbjct: 1042 KYYVAGNMTEDQRQ-HYVLNLPVYTHFTNPSRRYADIIVHRQLEAVL 1087
>gi|295667800|ref|XP_002794449.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226285865|gb|EEH41431.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1343
Score = 233 bits (595), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 163/528 (30%), Positives = 255/528 (48%), Gaps = 49/528 (9%)
Query: 351 GRVVSIIERSPRR--DGIVGFLN-VNQWFNYKGGSRKDAKKNRSSLSVPDRE-----YIQ 402
G VV++IER + G +G L +Q K + + A+ S DR+ +
Sbjct: 557 GHVVAVIERVAGQMFSGSLGVLRPSSQATKEKQEAERQARDGSHSRHHHDRQQEKPKIVW 616
Query: 403 LTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVF 462
PT + P + + + P + E A + A I W S P ++
Sbjct: 617 FKPTDKRVPLIAIPTEQAP----RDFVEKHADYANNIFVACIKRWPITSLHPFGTLVEQL 672
Query: 463 GRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEE---LLSRKDLRNFCIFT 519
G G ++ + +A+L +N FS L + W V E L SR+D R FT
Sbjct: 673 GAMGNLKVETDALLRDNNFASDEFSDAVLKNVGFENWSVEDEGEALLSSRRDFRYETTFT 732
Query: 520 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 579
IDP+ +LDDA+ ++ LSDG +G+H+ADV++F+ + +D EA+ R T VY++ R +
Sbjct: 733 IDPNGTKELDDAIHVKTLSDGKVEIGIHVADVAHFIKGNSLVDREAKKRGTGVYLMNRVV 792
Query: 580 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV--DRWIGRTVIRSCCKLSYEHAQD 637
MLP LS E+ SL PG +RL S+ + +N A +V + WIG+ VI+S KL+Y+
Sbjct: 793 NMLPPRLSTEICSLLPGEERLTVSVVFQVNPATGIVEGEPWIGKAVIKSSGKLTYDEVDA 852
Query: 638 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 697
++ G D+ QL+G V IK+L +++ K+ RF + + R+ + +
Sbjct: 853 VLGGNSDI-----------QLHGV-----TVDDIKTLNDIASKFKEARFGNRSTRIPSLR 896
Query: 698 PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMR 757
++ D+ P + + + L EE AN AE + A P+ ALLRR PN R
Sbjct: 897 LLYQLDDENVPVEHNIFDTTPAHELIEELSHKANTFVAEKLVSALPEKALLRRQAPPNFR 956
Query: 758 KLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYAT-----RPMQL 812
+L+ F ++ G +D++SSG SL + + D+ I + MQ
Sbjct: 957 RLQTFVDRMTRLGYDIDSTSSGTLQTSL----------FKIGDVEIRKGMETLLLKAMQR 1006
Query: 813 ASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
A Y+ +G D+ HY L P+YTHFTSP R D+VVHR L A L
Sbjct: 1007 AKYYVAGSVTDEQRQ-HYVLKLPLYTHFTSPSGRDADIVVHRQLEAVL 1053
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R +F P+ ++ L G + RVN NR +AY + D+ I G +NRA
Sbjct: 389 RKTLFTPYLPQASLPALLNDGQLVAGILRVNKKNRSDAYVTTPDLDADIFICGSKDRNRA 448
Query: 216 VEGDFVLIK-VDRLSLWAK 233
+EGD V ++ +D +W++
Sbjct: 449 LEGDLVAVELLDVDEVWSQ 467
>gi|258568908|ref|XP_002585198.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237906644|gb|EEP81045.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 1295
Score = 233 bits (595), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 197/732 (26%), Positives = 326/732 (44%), Gaps = 86/732 (11%)
Query: 152 QSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAA 211
Q + R +F P+ + L G + RVN NR +AY + D+ I G
Sbjct: 322 QQQQRKTLFTPYLPQANLPALLNDGQLVTGILRVNKKNRSDAYVTTPDLDADIFICGSKD 381
Query: 212 QNRAVEGDFVLIK-VDRLSLWAKMKGFSNNSSI--VEDSNLPTEAN---GMHSDICKGKS 265
+NRA+EGD V I+ +D +W++ + + D+ + A G G+S
Sbjct: 382 RNRALEGDLVAIELLDVDEVWSQKREKEEKKKRKDITDTRSGSSAGLERGRSESATNGES 441
Query: 266 KVDVSYEYSNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSS 325
+V L ++ +D +E EG + + SD + + +
Sbjct: 442 QVAPDGSIRRRGSLRQRPTQKKNDD---------VEVEGQSLLLVEEDEISDDHKPLYA- 491
Query: 326 QQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRR--DGIVGFLN-VNQWFNYKGGS 382
G VV++IER P + G +G L +Q K +
Sbjct: 492 -------------------------GHVVAVIERVPGQMFSGSLGLLRPSSQATKEKQEA 526
Query: 383 RKDAKKNRSSLSVPDR-----EYIQLTPTHPKYPKMVVLVKDLP-DSIKKRLEEGDATIE 436
+ A+ S +R + + PT + P + + + P D ++K + +
Sbjct: 527 ERQARDGGHSRPQQERHQDKPKIVWFKPTDKRVPLIAIPTEQAPRDFVEKHQDYAN---- 582
Query: 437 MELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC 496
+ A I W S P ++ G G++ + +A+L +N FS L +
Sbjct: 583 -NIFVAAIKRWPITSLHPFGTLVEQLGSMGDLNVETDALLRDNNFASDEFSDAVLKNVGF 641
Query: 497 VPWEVPQE---ELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSY 553
W V E L +R+D R+ IFTIDP+ + +LD+A+ +++LSDG +G H+ADV++
Sbjct: 642 ENWTVESESAASLAARRDFRDEKIFTIDPNGSNELDNAIHLKQLSDGKVEIGFHVADVTH 701
Query: 554 FVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGD 613
F+ P + +D EA+ R T VY++ R + MLP LS + L PG DR S+ + ++
Sbjct: 702 FIKPNSLVDREAKKRGTGVYLMTRIVNMLPPRLSSNICCLQPGEDRFTISVVYHIDPKTG 761
Query: 614 VV--DRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSI 671
+V + WIG+ +I+S KL+Y+ ++ K DVE + + I
Sbjct: 762 IVEGEPWIGKGIIKSSGKLTYDEVDAVLSDK-DVEL----------------HAATIADI 804
Query: 672 KSLYEVSKILKDKRFTDGALRLENSKPVFLF---DEYGTPYDSVLSGREDLNFLFEEFML 728
K L ++ ++ RF R + P+ LF D+ P + + L EE
Sbjct: 805 KLLNCIATKFREARF---GHRSADVPPLRLFYQLDDENVPVFHNIFDSSSAHELMEELSH 861
Query: 729 LANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQA 788
N A+ + P ALLRR +PN R+L F ++ G ++D+SSSG SL +
Sbjct: 862 KTNSLVAKRLFTVLPQKALLRRQASPNYRRLGTFVDRMTRLGYEMDSSSSGSLQTSLFKV 921
Query: 789 REKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYP 848
++ D L + + M+ A Y+ +G +DD D HYAL P+YTHFT+P RRY
Sbjct: 922 QD--VDLRKLSQGMETLLVKAMRRAKYYTAGSVRDD-DRQHYALNLPLYTHFTNPSRRYA 978
Query: 849 DLVVHRTLNAAL 860
D+VVHR L+A +
Sbjct: 979 DIVVHRQLDAII 990
>gi|406864888|gb|EKD17931.1| RNB domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1392
Score = 233 bits (595), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 158/533 (29%), Positives = 263/533 (49%), Gaps = 43/533 (8%)
Query: 351 GRVVSIIERSPRR--DGIVGFLN-VNQWFNYKGGSRKDAKKNRSSLSVPDREY-----IQ 402
G +V+++ER + G +G L +Q K + + A+ S R+ +
Sbjct: 609 GHIVAVVERVAGQMFSGTLGLLRPSSQATKEKQEAERQARDGNSGRHQEQRQQDKPKIVW 668
Query: 403 LTPTHPKYPKMVVLVKDLP-DSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHV 461
PT + P + + + P D ++K + D + A I W S P ++
Sbjct: 669 FKPTDKRVPLIAIPTEQAPRDFVEKHQDYAD-----RIFVACIKRWPITSLHPFGTLVEQ 723
Query: 462 FGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQE---ELLSRKDLRNFCIF 518
G+ GE++ + +A+L +N FS + W + +E E+ +R+D RN F
Sbjct: 724 LGKMGELKVETDALLRDNNFASDEFSDAVTRSVGLDEWSIEKEDEAEIAARRDFRNEKTF 783
Query: 519 TIDPSTATDLDDALSIE-RLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 577
TIDP+ A +LDDA+ ++ DG +G+HIADV++F+ + +D EA+ R ++VY++ R
Sbjct: 784 TIDPNGADELDDAIHVKTEEEDGKIEIGIHIADVAHFIKANSLVDREARKRGSAVYLMNR 843
Query: 578 KIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV---DRWIGRTVIRSCCKLSYEH 634
MLP ++ E+ SL PG DRL S+ + +N+ +V D WIG+++I+S KL+Y+
Sbjct: 844 SCAMLPPKIASEICSLVPGQDRLTVSVVFKVNAHTGMVSDEDTWIGKSIIKSAGKLTYKE 903
Query: 635 AQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLE 694
++ G D + + +D VR I+ L VS+ +++R +
Sbjct: 904 VDAVLSGHLDT---------------KLDGAD-VREIQILNAVSQKWRERRLGTEGETIT 947
Query: 695 NSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAP 754
+ ++ D+ P + + + L EE M AN A+ I + P+ ALLRR P
Sbjct: 948 PLRLIYQLDDENVPVEQNIFDSTPSHELIEELMHKANAYVAQRIFKGLPEKALLRRQGPP 1007
Query: 755 NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLAS 814
N R+L+ F + +K G ++D ++SG SL + DD + + + M A
Sbjct: 1008 NPRRLQTFISRMNKIGYEIDATTSGTLQTSLFKV-----DDTQIRLGMETLLVKAMHRAK 1062
Query: 815 YFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYW 867
YF +G + HYAL FP+YTHFT+P RRY DLVVHR L A L K+ +
Sbjct: 1063 YFIAGKTPAHL-YPHYALNFPLYTHFTNPSRRYADLVVHRQLEAVLSEGKIEF 1114
Score = 49.3 bits (116), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Query: 151 HQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEG--VQTDVLITG 208
HQ + R +F P+ + L G + RVN NR +AY + + D+ I G
Sbjct: 435 HQQQQRKTLFTPYLPQATLPALLGDGQLVSGILRVNKKNRSDAYVTTQDGLLDADIFICG 494
Query: 209 IAAQNRAVEGDFVLIK-VDRLSLWAK 233
+NRA+EGD V ++ +D +W +
Sbjct: 495 SKDRNRALEGDLVAVELLDVDEVWGQ 520
>gi|344302216|gb|EGW32521.1| hypothetical protein SPAPADRAFT_138689 [Spathaspora passalidarum
NRRL Y-27907]
Length = 987
Score = 233 bits (594), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 170/492 (34%), Positives = 245/492 (49%), Gaps = 43/492 (8%)
Query: 413 MVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQI 472
V+L+ L ++ R + + +V +D W S +P H + G E +
Sbjct: 415 FVILMDKLLPKVRIRTRKAKEYLGQRIVIV-VDSWPSNSRYPNGHFVRTLGEIESAEAET 473
Query: 473 NAILYENAICCSGFSPESLSCLPCVP--WEVPQ------EELLSRKDLRNFCIFTIDPST 524
A+L E+ + FS L CLP W VP +L R DLR+ + +IDP
Sbjct: 474 EALLLEHDVEYRPFSKNVLDCLPKEGDNWVVPDMTDPQDPQLKKRVDLRDRLVCSIDPPG 533
Query: 525 ATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPV 584
D+DDAL L +G VGVHIADV++FV P TALD E R TSVY++ ++I MLP+
Sbjct: 534 CVDIDDALHARVLPNGNYEVGVHIADVTHFVKPNTALDQEGASRGTSVYLVDKRIDMLPM 593
Query: 585 LLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFD 644
LL + SL P VDR AFS+ W+L+ +++ ++VI+S SYE AQ ID
Sbjct: 594 LLGTNLCSLKPFVDRFAFSVIWELDENANILKVDYMKSVIKSRQAFSYEQAQLRIDDPTQ 653
Query: 645 VESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFLFD 703
+ ++ S++ L ++SK LK R GAL L + + V +
Sbjct: 654 TD-------------------ELTNSMRVLLKLSKKLKQGRMDAGALNLASPEVKVHMDS 694
Query: 704 EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH---PAPNMRKLR 760
E P + + + N L EEFML AN + A I ++P +A+LRRH PA N L
Sbjct: 695 ETSDPQEVEIKKLLETNSLVEEFMLFANISVARKIYDSYPQTAMLRRHAPPPATNFETLN 754
Query: 761 EFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSG 819
+ K+G+ + SS SL++ + D Y F+ LI +TR M A YF SG
Sbjct: 755 DM-LNVRKNGMSISLESSKALADSLDRIVDP-NDPY--FNTLIRIMSTRCMMAAEYFPSG 810
Query: 820 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR-----RMLP 874
+ ++ HY LA +YTHFTSP+RRY D+VVHR L A+ E L HR M+
Sbjct: 811 SY-GYPEFRHYGLAVDIYTHFTSPIRRYCDVVVHRQLAGAIGYENLDLSHRDKQRMEMIV 869
Query: 875 KNNHREGVRGRF 886
KN ++ +F
Sbjct: 870 KNINKRHRNAQF 881
>gi|422823160|ref|ZP_16871348.1| ribonuclease R [Streptococcus sanguinis SK405]
gi|324993810|gb|EGC25729.1| ribonuclease R [Streptococcus sanguinis SK405]
Length = 782
Score = 233 bits (594), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 153/441 (34%), Positives = 238/441 (53%), Gaps = 30/441 (6%)
Query: 438 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAI-LYENAICCSGFSPESLSCLP 495
E++ ID++ ++ F A ++ V G + P I+ + + E+ S F + L
Sbjct: 180 EVLKVAIDKYPTKKHDFFVASLVDVVGHVND--PGIDVLEVLESMDIVSEFPEKVLEEAE 237
Query: 496 CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFV 555
VP + +L R DLR FTID + A DLDDA+ I+RL +G +GVHIADVSY+V
Sbjct: 238 RVPDAPTESDLEGRLDLREEITFTIDGADAKDLDDAVHIKRLKNGNFELGVHIADVSYYV 297
Query: 556 LPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV 615
G+ LD EA R+TSVY+ R +PMLP LS + SLNP VDRL S ++++ G V+
Sbjct: 298 KEGSELDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPNVDRLTQSAIMEIDAKGRVI 357
Query: 616 DRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 675
I +TVI++ +++Y DII G D E + ++ +V SI S+
Sbjct: 358 KHTITQTVIKTTFRMTYSDVNDIIAG--DQEKAE-------------QFKAIVPSIDSMV 402
Query: 676 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 735
++ +IL+ RF GAL + ++ + ++ G P D VL R + E FML+AN+T A
Sbjct: 403 QLHEILESMRFKRGALNFDTNEAKIMVNKEGRPVDIVLRQRGIAERMIESFMLVANETVA 462
Query: 736 EVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 794
E A+ P + R H P K+++F + S G+++ ++S Q+L+ E +KD
Sbjct: 463 EHFAKLNLP--FIYRIHEEPKAEKVQKFIDYASSFGIRIYGTASSMSQQALQDIMEAVKD 520
Query: 795 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 854
D+L R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 Q-PYEDVLSMMLLRSMQQARY-------SEHNHGHYGLAAEFYTHFTSPIRRYPDLLVHR 572
Query: 855 TLNAALEAEKLYWKHRRMLPK 875
+ +++++ +++P+
Sbjct: 573 MVRDYGKSKEIAEHFEQVIPE 593
>gi|422882685|ref|ZP_16929141.1| ribonuclease R [Streptococcus sanguinis SK355]
gi|332358718|gb|EGJ36541.1| ribonuclease R [Streptococcus sanguinis SK355]
Length = 782
Score = 233 bits (594), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 153/440 (34%), Positives = 238/440 (54%), Gaps = 30/440 (6%)
Query: 438 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAI-LYENAICCSGFSPESLSCLP 495
E++ ID++ ++ F A ++ V G + P I+ + + E+ S F + L
Sbjct: 180 EVLKVAIDKYPTKKHDFFVASLVDVVGHVND--PGIDVLEVLESMDIVSEFPEKVLEEAE 237
Query: 496 CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFV 555
VP + +L R DLR+ FTID + A DLDDA+ I+RL +G +GVHIADVSY+V
Sbjct: 238 RVPDTPTESDLERRLDLRDEITFTIDGADAKDLDDAVHIKRLKNGNFELGVHIADVSYYV 297
Query: 556 LPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV 615
G+ LD EA R+TSVY+ R +PMLP LS + SLNP VDRL S+ ++++ G VV
Sbjct: 298 KEGSELDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPNVDRLTQSVIMEIDAKGRVV 357
Query: 616 DRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 675
I +TVI++ +++Y DII G D E + ++ +V SI +
Sbjct: 358 KHTITQTVIKTTFRMTYSDVNDIIAG--DQEKAE-------------QFKAIVPSIDCMV 402
Query: 676 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 735
++ +IL+ RF GAL + ++ + ++ G P D VL R + E FML+AN+T A
Sbjct: 403 QLHEILESMRFKRGALNFDTNEAKIMVNKEGRPVDIVLRQRGIAERMIESFMLVANETVA 462
Query: 736 EVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 794
E A+ P + R H P K+++F + S G+++ ++S Q+L+ E +KD
Sbjct: 463 EHFAKLNLP--FIYRIHEEPKAEKVQKFIDYASSFGIRIYGTASSMSQQALQDIMEAVKD 520
Query: 795 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 854
D+L R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 Q-PYEDVLSMMLLRSMQQARY-------SEHNHGHYGLAAEFYTHFTSPIRRYPDLLVHR 572
Query: 855 TLNAALEAEKLYWKHRRMLP 874
+ +++++ +++P
Sbjct: 573 MVRDYGKSKEIAEHFEQVIP 592
>gi|422826751|ref|ZP_16874930.1| ribonuclease R [Streptococcus sanguinis SK678]
gi|324994869|gb|EGC26782.1| ribonuclease R [Streptococcus sanguinis SK678]
Length = 782
Score = 233 bits (594), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 153/441 (34%), Positives = 238/441 (53%), Gaps = 30/441 (6%)
Query: 438 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAI-LYENAICCSGFSPESLSCLP 495
E++ ID++ ++ F A ++ V G + P I+ + + E+ S F + L
Sbjct: 180 EVLKVAIDKYPTKKHDFFVASLVDVVGHVND--PGIDVLEVLESMDIVSEFPEKVLEEAE 237
Query: 496 CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFV 555
VP + +L R DLR FTID + A DLDDA+ I+RL +G +GVHIADVSY+V
Sbjct: 238 RVPEAPTESDLAGRLDLREEITFTIDGADAKDLDDAVHIKRLKNGNFELGVHIADVSYYV 297
Query: 556 LPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV 615
G+ LD EA R+TSVY+ R +PMLP LS + SLNP VDRL S ++++ G VV
Sbjct: 298 KEGSELDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPNVDRLTQSAIMEIDAKGRVV 357
Query: 616 DRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 675
I +TVI++ +++Y DII G + E + ++ +V SI S+
Sbjct: 358 KNTITQTVIKTTFRMTYSDVNDIIAG--NQEKAE-------------QFKAIVPSIDSMV 402
Query: 676 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 735
++ +IL+ RF GAL + ++ + ++ G P D VL R + E FML+AN+T A
Sbjct: 403 QLHEILESMRFKRGALNFDTNEAKIMVNKEGRPVDIVLRQRGIAERMIESFMLVANETVA 462
Query: 736 EVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 794
E A+ P + R H P K+++F + S G+++ ++S Q+L+ E +KD
Sbjct: 463 EHFAKLNLP--FIYRIHEEPKAEKVQKFIDYASSFGIRIYGTASSMSQQALQDIMEAVKD 520
Query: 795 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 854
D+L R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 Q-PYEDVLSMMLLRSMQQARY-------SEHNHGHYGLAAEFYTHFTSPIRRYPDLLVHR 572
Query: 855 TLNAALEAEKLYWKHRRMLPK 875
+ +++++ +++P+
Sbjct: 573 MVRDYGKSKEIAEHFEQVIPE 593
>gi|422875979|ref|ZP_16922449.1| ribonuclease R [Streptococcus sanguinis SK1056]
gi|332362415|gb|EGJ40215.1| ribonuclease R [Streptococcus sanguinis SK1056]
Length = 782
Score = 233 bits (593), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 153/422 (36%), Positives = 228/422 (54%), Gaps = 30/422 (7%)
Query: 438 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAI-LYENAICCSGFSPESLSCLP 495
E++ ID++ ++ F A ++ V G + P I+ + + E+ S F + L
Sbjct: 180 EVLKVAIDKYPTKKHDFFVASLVDVVGHVND--PGIDVLEVLESMDIVSEFPEKVLEEAE 237
Query: 496 CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFV 555
VP + +L R DLR FTID + A DLDDA+ I+RL +G +GVHIADVSY+V
Sbjct: 238 RVPDAPTESDLAGRLDLREEITFTIDGADAKDLDDAVHIKRLKNGNFELGVHIADVSYYV 297
Query: 556 LPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV 615
G+ LD EA R+TSVY+ R +PMLP LS + SLNP VDRL S ++++ G VV
Sbjct: 298 KEGSELDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPNVDRLTQSAIMEIDAKGRVV 357
Query: 616 DRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 675
I +TVI++ +++Y DII G D E + ++ +V SI S+
Sbjct: 358 KHTITQTVIKTTFRMTYSDVNDIIAG--DEEKAE-------------QFKAIVPSIDSMV 402
Query: 676 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 735
++ +IL+ RF GAL + ++ + ++ G P D VL R + E FML+AN+T A
Sbjct: 403 QLHEILESMRFKRGALNFDTNEAKIMVNKEGRPVDIVLRQRGIAERMIESFMLVANETVA 462
Query: 736 EVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 794
E A+ P + R H P K+++F + S G+++ ++S Q+L+ E +KD
Sbjct: 463 EHFAKLNLP--FIYRIHEEPKAEKVQKFIDYASSFGVRIYGTASSMSQQALQDIMEAVKD 520
Query: 795 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 854
D+L R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 Q-PYEDVLSMMLLRSMQQARY-------SEHNHGHYGLAAEFYTHFTSPIRRYPDLLVHR 572
Query: 855 TL 856
+
Sbjct: 573 MV 574
>gi|384494201|gb|EIE84692.1| hypothetical protein RO3G_09402 [Rhizopus delemar RA 99-880]
Length = 1080
Score = 233 bits (593), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 156/528 (29%), Positives = 276/528 (52%), Gaps = 52/528 (9%)
Query: 351 GRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKY 410
G VV+I+ER+ + G L +++ N K ++ + ++S P + T +
Sbjct: 363 GVVVAILERA-QNQVFSGTLTLSRP-NNKRAQMQEEEGDKSKKDAP--RIVWFKATDKRV 418
Query: 411 PKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEP 470
P + + ++ +P+ + E L I W S P + G ++
Sbjct: 419 PLIAIPIEQVPEDFVENTE----AYANRLFVGSIKRWPITSLHPFGTLETELGPITGLDV 474
Query: 471 QINAILYENAICCSGFSPESLSCLPCVPWE-VPQEELLSRKDL--RNFC-IFTIDPSTAT 526
Q+ AIL + + + FS + C+P P+ +P E +R+DL + C + TIDP+ +T
Sbjct: 475 QVKAILADANVTDAPFSEPVMQCIPPTPFSFIPSAEE-NRRDLTTESHCRMITIDPAGST 533
Query: 527 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 586
+D +++ RL D VGVH+ D+SYF+ P + LD EA+ R VY+ +++PMLP L
Sbjct: 534 LFEDGITVVRLGDDTFEVGVHVCDISYFIKPHSPLDKEARARGVHVYLDHKQVPMLPTEL 593
Query: 587 SE----EVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 642
++ + L P A SI W L++ G ++D W G+T++RS +LSY++ + IIDG
Sbjct: 594 ADAANFTLNELKP-----AMSIIWKLSTDGTLLDTWFGKTIVRSNAQLSYDNVEKIIDG- 647
Query: 643 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 702
S + GE ++ I+ L+ ++ L + R+T A+ L +K ++
Sbjct: 648 -----SESQGE------------EIDNDIRLLHRLATRLYENRYTKQAMSL--AKQRIVY 688
Query: 703 DEYGTPYDSVLSGRE-DLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLRE 761
D+ P + +S + ++ + +EF+ LAN++ A+ I+ +P+ ALLRR P+ RK+ E
Sbjct: 689 DDPTKPSTATISDKNPEIAKVIKEFLFLANQSVAQKISSQYPEQALLRRQSPPDSRKINE 748
Query: 762 FEAFCSKH-GLQLDTSSSGQFHQSLEQARE-KLKDDYVLFDILINYATRPMQLASYFCSG 819
+ + S + ++LD +S+ S+++ +L+ L IL+ P YFC+G
Sbjct: 749 LKEYASNYLNVELDITSATTIQNSVQKIENPELRQ---LISILVLKTIEP---PKYFCAG 802
Query: 820 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYW 867
F D + H+A+ P++THFT+PLRRY D++VHR L AAL +K ++
Sbjct: 803 AF-DILKYSHFAIGAPLFTHFTAPLRRYADIIVHRQLEAALVGDKHFY 849
Score = 43.9 bits (102), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 144 NKDDNPSHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQ-T 202
++DD HQ R +F H A+ + + RVN NR +AY + + +
Sbjct: 229 SRDDANPHQ---RRPLFIAHLPFSALTPLFRSRQLVRGMLRVNKRNRSDAYVSCDELDGS 285
Query: 203 DVLITGIAAQNRAVEGDFVLIKV 225
D+ I G +NRA+EGD V +++
Sbjct: 286 DIYICGSRDRNRALEGDVVAVRL 308
>gi|422865059|ref|ZP_16911684.1| ribonuclease R [Streptococcus sanguinis SK1058]
gi|327490243|gb|EGF22031.1| ribonuclease R [Streptococcus sanguinis SK1058]
Length = 782
Score = 233 bits (593), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 155/444 (34%), Positives = 242/444 (54%), Gaps = 36/444 (8%)
Query: 438 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAI-LYENAICCSGFSPESLSCLP 495
E++ ID++ ++ F A ++ V G + P I+ + + E+ S F + L
Sbjct: 180 EVLKVAIDKYPTKKHDFFVASLVDVVGHVND--PGIDVLEVLESMDIVSEFPEKVLEEAE 237
Query: 496 CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFV 555
VP + +L R DLR FTID + A DLDDA+ I+RL +G +GVHIADVSY+V
Sbjct: 238 RVPEAPTESDLAGRLDLREEITFTIDGADAKDLDDAVHIKRLKNGNFELGVHIADVSYYV 297
Query: 556 LPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV 615
G+ LD EA R+TSVY+ R +PMLP LS + SLNP VDRL S ++++ G VV
Sbjct: 298 KEGSELDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPNVDRLTQSAIMEIDAKGRVV 357
Query: 616 DRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 675
I +TVI++ +++Y DII G + E + ++ ++V SI S+
Sbjct: 358 KHTITQTVIKTTFRMTYSDVNDIIAG--NQEKAE-------------QFKEIVPSIDSMV 402
Query: 676 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 735
++ +IL+ RF GAL + ++ + ++ G P D VL R + E FML+AN+T A
Sbjct: 403 QLHEILEIMRFKRGALNFDTNEAKIMVNKEGRPVDIVLRQRGIAERMIESFMLVANETVA 462
Query: 736 EVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 794
E A+ P + R H P K+++F + S G+++ ++S QSL+ E +KD
Sbjct: 463 EHFAKLNLP--FIYRIHEEPKAEKVQKFIDYASSFGIRIYGTASSMSQQSLQDIMEAVKD 520
Query: 795 ---DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 851
+ VL +L+ R MQ A Y + + GHY LA YTHFTSP+RRYPDL+
Sbjct: 521 QPYEEVLSMMLL----RSMQQARY-------SEHNHGHYGLAAEFYTHFTSPIRRYPDLL 569
Query: 852 VHRTLNAALEAEKLYWKHRRMLPK 875
VHR + +++++ +++P+
Sbjct: 570 VHRMVRDYGKSKEIAEHFEQVIPE 593
>gi|384499543|gb|EIE90034.1| hypothetical protein RO3G_14745 [Rhizopus delemar RA 99-880]
Length = 1114
Score = 233 bits (593), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 149/460 (32%), Positives = 248/460 (53%), Gaps = 42/460 (9%)
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
+ P + + ++ +P K +E DA L I W S P + + G +
Sbjct: 449 RVPLIAIPIEQVP---KDFVENSDAYAN-RLFVGSIKRWPITSLHPFGTLENELGPITHL 504
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDL---RNFCIFTIDPSTA 525
+ Q+ AIL + I + F+ + C+P P+ + +R+DL + + TIDPS +
Sbjct: 505 DVQVKAILADANISDTPFTEAVMECVPPTPFRFEPSDEENRRDLTLENHNRMITIDPSGS 564
Query: 526 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 585
T +D L+I RL D VGVH+ D+SYF+ P + LD EA+ R V + +++PM+PV
Sbjct: 565 TIFEDGLTIVRLGDDTFEVGVHVCDISYFIKPHSPLDKEARARGVHVRLDCKEVPMIPVE 624
Query: 586 LSEEVGSLNPGVD--RLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKF 643
L + + N V+ + A SI W L+ G ++D W+G+T +RS +LSY+ + I+DG
Sbjct: 625 L---INAANFTVNEPKPAMSIIWKLSKDGMLLDTWLGKTTVRSVAQLSYDDVEKIMDG-- 679
Query: 644 DVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD 703
S + GE ++ + I L+ ++ L RFT+ A+ L SK + FD
Sbjct: 680 ----SESRGE------------EIDKDIYLLHLLATELHKHRFTEQAMSL--SKQILSFD 721
Query: 704 EYGTPYDSVLSGRE-DLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 762
+ P +S + ++ + +EF+ LAN+ A+ I+ +P+ ALLRR PN RK+ E
Sbjct: 722 DPMKPSKVNISYKNPEIASIVKEFLFLANQAVAQKISSQYPEQALLRRQSPPNNRKINEL 781
Query: 763 EAFCSKH-GLQLDTSSSGQFHQSLEQAR-EKLKDDYVLFDILINYATRPMQLASYFCSGD 820
+ + +KH G++LD +++ S+++ ++L+ L ILI + M+ YFC+G
Sbjct: 782 QEYAAKHLGIELDITNATTLQSSVQKIETQELRQ---LVSILI---LKTMEPPKYFCAGA 835
Query: 821 FKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
F D + H++L P++THFT+PLRRY D++VHR L AAL
Sbjct: 836 F-DILKYSHFSLGTPLFTHFTAPLRRYVDIIVHRQLEAAL 874
Score = 45.4 bits (106), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 145 KDDNPSHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQ-TD 203
+DD HQ R +F H A+ L + + RVN NR +AY + + +D
Sbjct: 262 RDDANPHQ---RRPLFIAHLPFSALTPLLRSRQLVRGMLRVNKRNRSDAYVSCDELDGSD 318
Query: 204 VLITGIAAQNRAVEGDFVLIKV 225
+ I G +NRA+EGD V +++
Sbjct: 319 IYICGSRDRNRALEGDVVAVRL 340
>gi|392390324|ref|YP_006426927.1| ribonuclease R [Ornithobacterium rhinotracheale DSM 15997]
gi|390521402|gb|AFL97133.1| ribonuclease R [Ornithobacterium rhinotracheale DSM 15997]
Length = 716
Score = 232 bits (592), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 164/513 (31%), Positives = 247/513 (48%), Gaps = 55/513 (10%)
Query: 409 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 468
KY ++V K +P I E + + V + W E++ P + V G+ G
Sbjct: 164 KYGFVIVEGKSMPVDIYVPKENLNHAQNGDKVVCNVVSWPEDADSPFGEITRVLGKPGVH 223
Query: 469 EPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDL 528
+ +I++IL E + + F E + E+ EE+ R+D+R+ FTIDP A D
Sbjct: 224 DVEIHSILAEYGLPAA-FPKEVEDEAQNLDTEIKLEEIAKRRDMRDVPTFTIDPKDAKDF 282
Query: 529 DDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSE 588
DDALS L +G VGVHIADVSY+V PGT LD EA R TSVY++ R +PMLP +LS
Sbjct: 283 DDALSFRILENGNYEVGVHIADVSYYVKPGTLLDEEAYKRGTSVYLVDRVVPMLPEVLSN 342
Query: 589 EVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESS 648
SL P D+ FS ++++ +++ W GRTV S + +YE AQ II+G
Sbjct: 343 FACSLRPNEDKYTFSAVFEMDKNANIIKSWFGRTVTHSDKRYAYEDAQAIIEGGEGELKE 402
Query: 649 NTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTP 708
L L +++KIL+ +R +GA+ + + F DE G P
Sbjct: 403 EIL---------------------ILDKLAKILRKERLKNGAISFDRLEVKFNLDEDGNP 441
Query: 709 YDSVLSGREDLNFLFEEFMLLANKTAAEVIA--RAFPD--SALLRRHPAPNMRKLREFEA 764
+D N L EEFMLLAN+ +E ++ R P + + R H P+ KL +
Sbjct: 442 LGVYFKESKDANKLIEEFMLLANRKVSEFVSLKRGKPTDRTFVYRIHDDPDPEKLASLKQ 501
Query: 765 FCSKHGLQLD----TSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGD 820
F + G +L+ ++ +Q L + K ++ +++ A R M A Y
Sbjct: 502 FIHQFGYKLELGDRKKTTASINQLLHDVKGKGEE-----NMIETLAMRSMSKAIYSTD-- 554
Query: 821 FKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE----AEKLYWK-------H 869
+ GHY LAF Y+HFTSP+RRYPD++ HR L L+ AEK ++
Sbjct: 555 -----NIGHYGLAFEYYSHFTSPIRRYPDVMAHRLLQRYLDGGKSAEKEVYEEKCEHCSQ 609
Query: 870 RRMLPKNNHREGVRGRFLTGIFYDKDAAESLEG 902
R L + R+ + +++ F DK E G
Sbjct: 610 RERLAADAERDSI--KYMQVKFMDKHVGEEFSG 640
>gi|422854675|ref|ZP_16901339.1| ribonuclease R [Streptococcus sanguinis SK160]
gi|325696170|gb|EGD38061.1| ribonuclease R [Streptococcus sanguinis SK160]
Length = 782
Score = 232 bits (592), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 153/422 (36%), Positives = 228/422 (54%), Gaps = 30/422 (7%)
Query: 438 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAI-LYENAICCSGFSPESLSCLP 495
E++ ID++ ++ F A ++ V G + P I+ + + E+ S F + L
Sbjct: 180 EVLKVAIDKYPTKKHDFFVASLVDVVGHVND--PGIDVLEVLESMDIVSEFPEKVLEEAE 237
Query: 496 CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFV 555
VP + +L R DLR IFTID + A DLDDA+ I+RL +G +GVHIADVSY+V
Sbjct: 238 RVPDAPTESDLEGRLDLREEVIFTIDGADAKDLDDAVHIKRLKNGNFELGVHIADVSYYV 297
Query: 556 LPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV 615
G+ LD EA R+TSVY+ R +PMLP LS + SLNP VDRL S ++++ G VV
Sbjct: 298 KEGSELDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPNVDRLTQSAIMEIDAKGRVV 357
Query: 616 DRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 675
I +TVI++ +++Y DII G + E + ++ +V SI S+
Sbjct: 358 KHTITQTVIKTIFRMTYSDVNDIIAG--NQEKAE-------------QFKAIVPSIDSMV 402
Query: 676 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 735
+ +IL+ RF GAL + ++ + ++ G P D VL R + E FML+AN+T A
Sbjct: 403 RLHEILESMRFKRGALNFDTNEAKIMVNKEGRPVDIVLRQRGIAERMIESFMLVANETVA 462
Query: 736 EVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 794
E A+ P + R H P K+++F + S G+++ ++S Q+L+ E +KD
Sbjct: 463 EHFAKLNLP--FIYRIHEEPKAEKVQKFIDYASTFGIRIYGTASSMSQQALQDIMEAVKD 520
Query: 795 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 854
D+L R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 Q-PYEDVLSMMLLRSMQQARY-------SEHNHGHYGLAAEFYTHFTSPIRRYPDLLVHR 572
Query: 855 TL 856
+
Sbjct: 573 MV 574
>gi|310794385|gb|EFQ29846.1| RNB domain-containing protein [Glomerella graminicola M1.001]
Length = 1362
Score = 232 bits (592), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 192/733 (26%), Positives = 325/733 (44%), Gaps = 85/733 (11%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEG--VQTDVLITGIAAQN 213
R +F P+ + L G + RVN NR +AY + + D+ I G +N
Sbjct: 418 RKTLFTPYLPQATLPALLGDGQLVSGILRVNKKNRSDAYVSTQDGLLDADIFICGSKDRN 477
Query: 214 RAVEGDFVLIKV-DRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYE 272
RA+EGD V +++ D +W++ + + D++
Sbjct: 478 RALEGDLVAVELLDVDEVWSQKREKEEKKK-----------------------RKDITDT 514
Query: 273 YSNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMN 332
S T + ++DDSS + + I R G T+K + + +G +
Sbjct: 515 RSGSTNGQTQSSGNNDDSSQQ---EGGIRRRGS--------LRQRPTQKKNDDVEVEGQS 563
Query: 333 AIERLSAMISSYPTKRPTGRVVSIIERSPRR--DGIVGFLNVNQWFNYKGG----SRKDA 386
+ I+ G +V++IER + G +G L + + + +D
Sbjct: 564 LLLVEEEEINDEAKPLYAGHIVAVIERVAGQMFSGNLGLLRPSSQATKEKQEAERAARDG 623
Query: 387 KKNR--SSLSVPDREYIQLTPTHPKYPKMVVLVKDLP-DSIKKRLEEGDATIEMELVAAR 443
NR + S + + PT + P + + + P D ++K + D + A
Sbjct: 624 GNNRHHDNRSQEKPKIVWFKPTDKRVPLIAIPTEQAPRDFVEKHQDYAD-----RIFVAC 678
Query: 444 IDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQ 503
I W S P ++ GR G+++ + +A+L +N FS L + W + +
Sbjct: 679 IKRWPITSLHPFGTLVEQLGRMGDLKVETDALLRDNNFSSDEFSEAVLRSVGLQDWSLAK 738
Query: 504 EE---LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 560
E+ L +R+D R+ + T+D + + +L +A+ I+ DG +G+HI DV++FV P +
Sbjct: 739 EDEAALATRRDFRDEKVVTLDLNGSPELANAIHIKTQPDGKIDIGIHIPDVTHFVKPNSL 798
Query: 561 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV---DR 617
+D EA+ R T+V+++ R +LP + EV SL PG +RLA S+ + +N V D
Sbjct: 799 VDREAKKRGTAVHLVNRTCALLPAKIGGEVCSLAPGEERLAVSVLFRVNPHNGAVAEGDA 858
Query: 618 WIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEW---SDVVRSIKSL 674
W+G+++I+S K++ D ID L GQ W S ++ ++ L
Sbjct: 859 WVGKSIIKSTAKITI----DEIDAA---------------LSGQANWKHESIQLKDVQIL 899
Query: 675 YEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTA 734
V++ + R G + + + D+ P + L EE M AN
Sbjct: 900 NAVAQKFTEARLGAGGEPIAPLRLLQQLDDENIPIKHNIFDSTPATELVEELMHKANAYV 959
Query: 735 AEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 794
A+ +A+A P+ ALLRR PN R+L+ F + G +++TS SG H SL + D
Sbjct: 960 AQRLAQALPEKALLRRQGPPNARRLQTFADRMNAIGYEVETSGSGSLHNSLFKV-----D 1014
Query: 795 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 854
D + + + MQ A YF +G W HYAL P+YTHFTSP RRY D++VHR
Sbjct: 1015 DADVRKGMETLVLKSMQRAKYFIAGKTAKQL-WPHYALNLPLYTHFTSPTRRYADIIVHR 1073
Query: 855 TLNAALEAEKLYW 867
L A L ++ +
Sbjct: 1074 QLEAVLSEGQIEY 1086
>gi|238878371|gb|EEQ42009.1| exosome complex exonuclease RRP44 [Candida albicans WO-1]
Length = 1004
Score = 232 bits (592), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 207/731 (28%), Positives = 323/731 (44%), Gaps = 128/731 (17%)
Query: 160 FAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEGD 219
F ++S + ++ G ++ + V+++N L+ + + +LI G NRA D
Sbjct: 255 FPEYYSNARIMAGIKNGTLYQGILNVSSYNYLQGEVSVPAFKKPLLIQGSKNLNRAFNSD 314
Query: 220 FVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCTLL 279
V++++ LP + ++ + T++
Sbjct: 315 SVIVEL-----------------------LPKD-----------------KWKEPSTTII 334
Query: 280 SEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSA 339
E I +D+++ + I G SD E++ +Q E +
Sbjct: 335 EEGAIGANDNAADGDDEEGGGGD----VIEGTKSVISDK-ERILLAQ--------EAIKV 381
Query: 340 MISSYPTKR--PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKG-----GSRKDAKKNRSS 392
+ S KR PT ++V ++ RS W Y G D K +S
Sbjct: 382 IGSKNEDKRLQPTAKIVGVMRRS--------------WRYYVGQIAPSSVNLDDKTGHAS 427
Query: 393 LSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESP 452
S ++ L PK PK+ + + + + +R + +D W S
Sbjct: 428 RSC----FVILM--DPKLPKIRIRTRKAREYLGQR------------IVVVVDSWPINSR 469
Query: 453 FPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVP--WEVPQ------- 503
+P H + G E + A+L E+ + FS L CLP W VP
Sbjct: 470 YPNGHFVRALGEIESAEAETEALLLEHDVEYRPFSKNVLDCLPKEGDNWVVPDITNNTED 529
Query: 504 EELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDI 563
+L R DLR+ + +IDP D+DDAL ++L +G VGVHIADV++FV P T LD
Sbjct: 530 PQLQKRVDLRDKLVCSIDPPNCVDIDDALHAKQLPNGNYEVGVHIADVTHFVKPNTPLDQ 589
Query: 564 EAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTV 623
E R TSVY++ ++I MLP LL + SL P VDR AFS+ W+++ ++V+ +++
Sbjct: 590 EGASRGTSVYLVDKRIDMLPQLLGTNLCSLKPFVDRFAFSVIWEVDEDANIVNVNYMKSI 649
Query: 624 IRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKD 683
I+S SYE AQ ID P + D+ +S++ L ++SK LK
Sbjct: 650 IKSRQAFSYEQAQLRIDD--------------PS-----QQDDLTKSMRILLKLSKKLKQ 690
Query: 684 KRFTDGALRLENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAF 742
KR GAL L + + V + E P + + + N L EEFML AN + A I A+
Sbjct: 691 KRLDAGALNLASPEVKVHMDSETSDPQEVEIKKLLETNSLVEEFMLFANISVARKIYDAY 750
Query: 743 PDSALLRRHPAPNMRKLREFEAFCS--KHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFD 800
P +A+LRRH AP + K+G+ + SS SL++ + D Y F+
Sbjct: 751 PQTAMLRRHAAPPATNFETLNDMLNVRKNGMSISLESSKALADSLDRCIDP-NDKY--FN 807
Query: 801 ILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAA 859
L+ +TR M A YF SG + ++ HY LA +YTHFTSP+RRY D+V HR L A
Sbjct: 808 TLVRIMSTRCMMAAEYFPSGSY-GYPEFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGA 866
Query: 860 LEAEKLYWKHR 870
+ E L HR
Sbjct: 867 IGYENLDLSHR 877
>gi|68479109|ref|XP_716360.1| likely exosome component Dis1p [Candida albicans SC5314]
gi|68479238|ref|XP_716298.1| likely exosome component Dis1p [Candida albicans SC5314]
gi|46437964|gb|EAK97302.1| likely exosome component Dis1p [Candida albicans SC5314]
gi|46438027|gb|EAK97364.1| likely exosome component Dis1p [Candida albicans SC5314]
Length = 1004
Score = 232 bits (592), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 207/731 (28%), Positives = 323/731 (44%), Gaps = 128/731 (17%)
Query: 160 FAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRAVEGD 219
F ++S + ++ G ++ + V+++N L+ + + +LI G NRA D
Sbjct: 255 FPEYYSNARIMAGIKNGTLYQGILNVSSYNYLQGEVSVPAFKKPLLIQGSKNLNRAFNSD 314
Query: 220 FVLIKVDRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCTLL 279
V++++ LP + ++ + T++
Sbjct: 315 SVIVEL-----------------------LPKD-----------------KWKEPSTTII 334
Query: 280 SEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSA 339
E I +D+++ + I G SD E++ +Q E +
Sbjct: 335 EEGAIGANDNAADGDDEEGGGGD----VIEGTKSVISDK-ERILLAQ--------EAIKV 381
Query: 340 MISSYPTKR--PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKG-----GSRKDAKKNRSS 392
+ S KR PT ++V ++ RS W Y G D K +S
Sbjct: 382 IGSKNEDKRLQPTAKIVGVMRRS--------------WRYYVGQIAPSSVNLDDKTGHAS 427
Query: 393 LSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESP 452
S ++ L PK PK+ + + + + +R + +D W S
Sbjct: 428 RSC----FVILM--DPKLPKIRIRTRKAREYLGQR------------IVVVVDSWPINSR 469
Query: 453 FPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVP--WEVPQ------- 503
+P H + G E + A+L E+ + FS L CLP W VP
Sbjct: 470 YPNGHFVRALGEIESAEAETEALLLEHDVEYRPFSKNVLDCLPKEGDNWVVPDITNNTED 529
Query: 504 EELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDI 563
+L R DLR+ + +IDP D+DDAL ++L +G VGVHIADV++FV P T LD
Sbjct: 530 PQLQKRVDLRDKLVCSIDPPNCVDIDDALHAKQLPNGNYEVGVHIADVTHFVKPNTPLDQ 589
Query: 564 EAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTV 623
E R TSVY++ ++I MLP LL + SL P VDR AFS+ W+++ ++V+ +++
Sbjct: 590 EGASRGTSVYLVDKRIDMLPQLLGTNLCSLKPFVDRFAFSVIWEVDEDANIVNVNYMKSI 649
Query: 624 IRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKD 683
I+S SYE AQ ID P + D+ +S++ L ++SK LK
Sbjct: 650 IKSRQAFSYEQAQLRIDD--------------PS-----QQDDLTKSMRILLKLSKKLKQ 690
Query: 684 KRFTDGALRLENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAF 742
KR GAL L + + V + E P + + + N L EEFML AN + A I A+
Sbjct: 691 KRLDAGALNLASPEVKVHMDSETSDPQEVEIKKLLETNSLVEEFMLFANISVARKIYDAY 750
Query: 743 PDSALLRRHPAPNMRKLREFEAFCS--KHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFD 800
P +A+LRRH AP + K+G+ + SS SL++ + D Y F+
Sbjct: 751 PQTAMLRRHAAPPATNFETLNDMLNVRKNGMSISLESSKALADSLDRCIDP-NDKY--FN 807
Query: 801 ILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAA 859
L+ +TR M A YF SG + ++ HY LA +YTHFTSP+RRY D+V HR L A
Sbjct: 808 TLVRIMSTRCMMAAEYFPSGSY-GYPEFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGA 866
Query: 860 LEAEKLYWKHR 870
+ E L HR
Sbjct: 867 IGYENLDLSHR 877
>gi|410459051|ref|ZP_11312805.1| ribonuclease R [Bacillus azotoformans LMG 9581]
gi|409930757|gb|EKN67752.1| ribonuclease R [Bacillus azotoformans LMG 9581]
Length = 784
Score = 232 bits (591), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 165/527 (31%), Positives = 262/527 (49%), Gaps = 69/527 (13%)
Query: 339 AMISSYPTK-RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPD 397
A I +P RP G +V +IER + IVG N++F +
Sbjct: 113 ARIDKHPADGRPEGAIVRVIERGVTQ--IVGTYVDNKYFGF------------------- 151
Query: 398 REYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAH 457
+ P + + + K E + +E V ++ ++ E +
Sbjct: 152 -----VIPDDKRIGSDIFIAK----------EAKNGAVEGHKVVVKLIKYPEGRMNAEGE 196
Query: 458 VLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCI 517
+ + G + I +I++++ + F P+ + P E+ +EL +R+DLR+ I
Sbjct: 197 ITEILGHKNDPGVDILSIIHKHQLPGD-FPPDVMEQAHNTPDEINPDELTNRRDLRDQTI 255
Query: 518 FTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 577
TID + A DLDDA+++ +L +G ++GVHIADVSY+V G+A+D EA R TS+Y++ R
Sbjct: 256 VTIDGADAKDLDDAVTVTKLDNGNYKLGVHIADVSYYVTEGSAIDKEAFNRGTSIYLVDR 315
Query: 578 KIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQD 637
IPM+P LS + SLNP VDRL S ++NS G+VV I ++VI++ +++Y
Sbjct: 316 VIPMIPHRLSNGICSLNPQVDRLTMSCEMEINSNGEVVSHEIFQSVIKTTERMTYSDVNK 375
Query: 638 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 697
IID K D E L E + L F D E+++IL+ KRF GA+ + +
Sbjct: 376 IIDDK-DPE----LLEKYKPLVPMFLLMD---------ELAEILRKKRFERGAIDFDFKE 421
Query: 698 PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA-RAFPDSALLRRHPAPNM 756
L DEYG P D ++ R L E+FML+AN+T AE P + R H P
Sbjct: 422 AKVLVDEYGKPTDVIIRERSSGERLIEDFMLIANETVAEHFHWMNLP--FIYRVHEDPKE 479
Query: 757 RKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLK---DDYVLFDILINYATRPMQLA 813
KL F F + G + +++ ++L+Q E+++ ++ V+ +++ R M+ A
Sbjct: 480 EKLSRFFEFITNFGYVVKGTANDVHPRALQQILEEVRGTPEEMVISTVML----RSMKQA 535
Query: 814 SYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
Y D GH+ L+ YTHFTSP+RRYPDL+VHR + L
Sbjct: 536 RY-------DAESLGHFGLSAEFYTHFTSPIRRYPDLIVHRLIRTYL 575
>gi|294507542|ref|YP_003571600.1| ribonuclease R [Salinibacter ruber M8]
gi|294343870|emb|CBH24648.1| ribonuclease R [Salinibacter ruber M8]
Length = 666
Score = 232 bits (591), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 152/436 (34%), Positives = 229/436 (52%), Gaps = 50/436 (11%)
Query: 438 ELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAI-LYENAICCSGFSPESLSCLPC 496
E V ID +++ P+ +L V G + P + + L + + F E +
Sbjct: 133 EKVMVSIDRFDDRKASPEGRILRVIGPSDD--PNVRVLSLAMSMDVKADFPDEVEAEAES 190
Query: 497 VPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVL 556
+P ++P++E+ R+DLR+ +FTIDP A D DDA+ +E L +G VGVHIADVS++V
Sbjct: 191 IPVKIPEDEIERRRDLRDKPVFTIDPVDAKDFDDAIHVEELDNGNYEVGVHIADVSHYVE 250
Query: 557 PGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD 616
P TA+D EA R TSVY++ R IPMLP LS +V SL P D+LAFSI +L + GDVVD
Sbjct: 251 PDTAIDAEALERGTSVYLVDRTIPMLPEKLSNKVCSLRPHEDKLAFSILMELTTEGDVVD 310
Query: 617 RWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 676
I TVI S +L+Y+ AQD I+G G+P +DVV++ +
Sbjct: 311 YEICETVIHSKERLTYDRAQDYIEG------------GYPD---DKMAADVVQANR---- 351
Query: 677 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 736
++K + +R +GA+ + + + D+ GTP + V R N L EEFMLLAN+T A+
Sbjct: 352 LAKTITRRRMQEGAIDFGSDEVNVILDDDGTPTNIVRKERLQANRLIEEFMLLANRTVAK 411
Query: 737 VIARA------------FPDSALLRRHPAPNMRKLREFEAFCS--KHGLQL--DTSSSGQ 780
IA P + R H +P+ ++++ + H L L + S
Sbjct: 412 HIAAPEHVDRHRSNGTDEPLPFVYRVHDSPDSEEIQQLAEYVRVFDHELPLTDGNARSSD 471
Query: 781 FHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHF 840
+++ + + ++ +++ A R M A Y + GHY L F Y+HF
Sbjct: 472 LGALIDEVQGQPEE-----QVIVRAALRAMSKAEYAVG-------NIGHYGLGFDYYSHF 519
Query: 841 TSPLRRYPDLVVHRTL 856
TSP+RRYPDL+VHR L
Sbjct: 520 TSPIRRYPDLMVHRLL 535
>gi|320586842|gb|EFW99505.1| cell wall biogenesis protein phosphatase [Grosmannia clavigera
kw1407]
Length = 1428
Score = 232 bits (591), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 194/738 (26%), Positives = 326/738 (44%), Gaps = 94/738 (12%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEG--VQTDVLITGIAAQN 213
R +F P+ + L G + RVN NR +AY + + D+ I G +N
Sbjct: 479 RKTLFTPYLPQATLPALLGDGQLVSGILRVNKKNRSDAYVTTQDGLLDADIFICGSKDRN 538
Query: 214 RAVEGDFVLIKV-DRLSLWAKMKGFSNNSSIVE-------DSNLPTEANGMHSDICKGKS 265
RA+EGD V I++ D +W++ + + N P + NG D +S
Sbjct: 539 RALEGDLVAIELLDVDEVWSQKREKEEKKKRKDITDTRSNSGNAPGQGNGNSDDNINAES 598
Query: 266 KVDVSYEYSNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSS 325
+ +L +DD E + ++E E N D + + +
Sbjct: 599 GI-----RRRGSLRQRPTQKKNDDVEVEGQSLLLVEEEEIN----------DEQKPLYAG 643
Query: 326 QQNDGMNAIERLSAMISSYPTK--RPTGRVVSIIERSPR--RDGIVGFLNVNQWFNYKGG 381
+ +ER++ + S RP+ + + + R RDG N + G
Sbjct: 644 HV---VAVVERVAGQMFSGTLGLLRPSSQATKEKQEAERAARDG-------NGSGRHHDG 693
Query: 382 SRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLP-DSIKKRLEEGDATIEMELV 440
+D K + PT + P + + + P D ++K E D +
Sbjct: 694 RHQDKPK-----------IVWFKPTDKRVPLIAIPTEQAPRDFVEKHQEYAD-----RIF 737
Query: 441 AARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWE 500
A I W S P ++ GR G+++ + +A+L +N FS L + W
Sbjct: 738 VACIKRWPITSLHPFGTLVEQLGRMGDLKVETDALLRDNNFASDEFSDAVLRNVTPQDWS 797
Query: 501 VPQEE---LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLP 557
+ +EE + SR+D R+ FTID + + +L +A+ + DG +G+H+ DV++FV P
Sbjct: 798 ITKEEDVAIKSRRDFRDEKAFTIDLNGSAELGNAVHVTSGPDGKVEIGIHVPDVAHFVKP 857
Query: 558 GTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV-- 615
T +D EA+ R T+V++L R +LP LS SL PG DRL S+ + +N V
Sbjct: 858 NTLVDREAKKRGTAVHLLNRTCALLPPKLSAGFCSLTPGEDRLTVSVVFQINPHNVTVAE 917
Query: 616 -DRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVV--RSIK 672
D W+G+++++S +++ +H D + +GQ D V + ++
Sbjct: 918 GDIWVGKSIVKSHGRVTLDHINDAL------------------AHGQDFKHDTVSAKDVQ 959
Query: 673 SLYEVSKILKDKRFTDGALRLENSKPVFLF---DEYGTPYDSVLSGREDLNFLFEEFMLL 729
L V++ ++ R G+ E P+ LF D+ P + + + EE M
Sbjct: 960 ILNFVTQKFREARLGAGS---EPIAPLRLFQQLDDENIPIEHNIFDTTTAVEIVEELMHK 1016
Query: 730 ANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAR 789
AN T A+ + +A PD A+LRR AP+ R+L+ + G ++D++SSG SL +
Sbjct: 1017 ANATIAQRLVQALPDKAVLRRQAAPSPRRLQTIVERMTALGYEIDSTSSGTLQNSLFKV- 1075
Query: 790 EKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPD 849
+D + + + MQ A Y+ SG W HYAL P+YTHFTSP RRY D
Sbjct: 1076 ----EDSDIRKGMETLLLKAMQRAKYYVSGKTAKHL-WPHYALNLPLYTHFTSPTRRYAD 1130
Query: 850 LVVHRTLNAALEAEKLYW 867
++VHR L++ L K+ +
Sbjct: 1131 VLVHRQLDSILSDGKVEY 1148
>gi|386715283|ref|YP_006181606.1| ribonuclease R [Halobacillus halophilus DSM 2266]
gi|384074839|emb|CCG46332.1| ribonuclease R [Halobacillus halophilus DSM 2266]
Length = 762
Score = 231 bits (590), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 146/436 (33%), Positives = 236/436 (54%), Gaps = 32/436 (7%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 499
V I ++ EE + ++ + G + I +I++++ I GF E L P
Sbjct: 180 VIVNITKFPEERMSAEGEIVEILGHKNDPGIDIISIIHKHGIKV-GFPDEVLKQAGETPD 238
Query: 500 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 559
++ +EE+ +R+DLR+ I TID + A DLDDA+++++L +G ++GVHIADV+Y+V G+
Sbjct: 239 QISEEEIKNRRDLRDETIVTIDGADAKDLDDAVTVKKLDNGNFKLGVHIADVTYYVDEGS 298
Query: 560 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 619
+D EA+ R+TSVY++ R IPM+P LS + SLNP VDRL S ++N +GDVV+ I
Sbjct: 299 PIDKEARERATSVYLVDRVIPMIPHRLSNGICSLNPHVDRLTLSCEMEINKSGDVVEHEI 358
Query: 620 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 679
++VI++ +++Y I++ + L + + L F + + ++K
Sbjct: 359 FQSVIKTNERMTYRDVNKILE-----DEDQELIKKYENLVPMF---------RDMAALAK 404
Query: 680 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 739
L+ KR GA+ + + + DE G D L R L EEFML AN+T AE
Sbjct: 405 TLRGKRMDRGAIDFDFKEAGVIVDEEGKAVDVKLRERSVAERLIEEFMLAANETIAEHF- 463
Query: 740 RAFPDSALLRR-HPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLK---DD 795
+ D + R H P+ KL+ F F + G + ++ Q+L++ E++K +D
Sbjct: 464 -HWMDVPFIHRIHQDPDESKLQNFFEFVANLGYAVKGTADNVHPQALQKVLEEVKGTQED 522
Query: 796 YVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRT 855
++ +++ R MQ A Y D GH+ LA YTHFTSP+RRYPDL+VHR
Sbjct: 523 MIISKLML----RSMQQAKY-------DPQSLGHFGLATDYYTHFTSPIRRYPDLIVHRL 571
Query: 856 LNAALEAEKLYWKHRR 871
+ L +KL +K R+
Sbjct: 572 IRTYLVEDKLDYKTRK 587
>gi|358392478|gb|EHK41882.1| hypothetical protein TRIATDRAFT_147106 [Trichoderma atroviride IMI
206040]
Length = 1099
Score = 231 bits (590), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 204/741 (27%), Positives = 329/741 (44%), Gaps = 101/741 (13%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCK-IEGV-QTDVLITGIAAQN 213
R +F P+ + L G + RVN NR +AY ++G+ D+ I G +N
Sbjct: 151 RKTLFTPYLPQATLPALLGDGQLVSGILRVNKKNRSDAYVTTLDGLLDADIFICGSKDRN 210
Query: 214 RAVEGDFVLIKV-DRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYE 272
RA+EGD V I++ D +W + + DI +S
Sbjct: 211 RALEGDLVAIELLDVDEVWGQKREKEEKKK--------------RKDITDTRS------- 249
Query: 273 YSNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMN 332
+ S+ +D+ ++SE I R G S + + ++ND +
Sbjct: 250 -GSINQGSQSAGQNDESNASEGG----IRRRG-------------SLRQRPTQKKNDDVE 291
Query: 333 AIERLSAMISSYPT----KRP--TGRVVSIIERSPRR--DGIVGFLN-VNQWFNYKGGSR 383
+E S ++ ++P G VV++IER + G +G L +Q K +
Sbjct: 292 -VEGQSLLLVEEEEINDEQKPLYAGHVVAVIERVAGQMFSGTLGLLRPSSQATKEKQEAE 350
Query: 384 KDAKKNRSSLSVPDRE-----YIQLTPTHPKYPKMVVLVKDLP-DSIKKRLEEGDATIEM 437
+ A++ +S S R+ + PT + P + + + P D ++K + D
Sbjct: 351 RAAREGGNSRSNDSRQQDKPKIVWFKPTDKRVPLIAIPTEQAPRDFVEKHQDYAD----- 405
Query: 438 ELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV 497
+ A I W S P ++ GR GE++ + +A+L +N FS L +
Sbjct: 406 RIFVACIKRWPITSLHPFGTLVEQLGRMGELKVETDALLRDNNFSSDEFSDAVLRSIGLQ 465
Query: 498 PWEVPQEE---LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYF 554
W + QE+ + R+D R+ +FT+D + +L +A+ + DG +G+H+ DV++F
Sbjct: 466 DWSLAQEDEAAIAERRDYRDENVFTVDYNGVAELGNAVHVTSRPDGKIDIGIHVPDVAHF 525
Query: 555 VLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDV 614
V P + D EA+ R T+V+++ R P+LP LS E+ SL PG DRL S+ + +N
Sbjct: 526 VKPNSLADREAKKRGTAVHLINRFCPLLPPKLSGELCSLAPGEDRLTISVVFTVNPVNGA 585
Query: 615 V---DRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDV-VRS 670
V D W+G+++I+S K+S D+ D + F+ + V +
Sbjct: 586 VAEGDSWVGKSIIKSAGKVSL---NDMDKALTDAST--------------FDNAAVPANT 628
Query: 671 IKSLYEVSKILKDKRFTDGALRLENSKPVFLF----DEYGTPYDSVLSGREDLNFLFEEF 726
I+ L V++ ++ R G+ E P+ L DE ++ E L L EE
Sbjct: 629 IQILRAVAQKFRETRLGAGS---EPIAPLRLLQGLDDENNQVQHNIFDSTEALE-LVEEL 684
Query: 727 MLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLE 786
M AN A+ + PD ALLRR APN R+L+ F + G +D S SG SL
Sbjct: 685 MHKANSYVAQRLVEGLPDKALLRRQAAPNSRRLQTFVERMTALGYDIDASGSGALQNSLF 744
Query: 787 QAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRR 846
+ DD L + + MQ A YF SG W HY L P+YTHFT+P RR
Sbjct: 745 KV-----DDADLRKGMETVLLKSMQRAKYFISGKTAKIV-WPHYTLNLPLYTHFTNPTRR 798
Query: 847 YPDLVVHRTLNAALEAEKLYW 867
Y D++VHR L A L K+ +
Sbjct: 799 YADIIVHRQLEAVLSEGKIEF 819
>gi|83815922|ref|YP_445650.1| ribonuclease R [Salinibacter ruber DSM 13855]
gi|83757316|gb|ABC45429.1| ribonuclease R [Salinibacter ruber DSM 13855]
Length = 666
Score = 231 bits (590), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 152/436 (34%), Positives = 229/436 (52%), Gaps = 50/436 (11%)
Query: 438 ELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAI-LYENAICCSGFSPESLSCLPC 496
E V ID +++ P+ +L V G + P + + L + + F E +
Sbjct: 133 EKVMVSIDRFDDRKASPEGRILRVIGPSDD--PNVRVLSLAMSMDVKADFPDEVEAEAES 190
Query: 497 VPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVL 556
+P ++P++E+ R+DLR+ +FTIDP A D DDA+ +E L +G VGVHIADVS++V
Sbjct: 191 IPVKIPEDEIERRRDLRDKPVFTIDPVDAKDFDDAVHVEELDNGNYEVGVHIADVSHYVE 250
Query: 557 PGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD 616
P TA+D EA R TSVY++ R IPMLP LS +V SL P D+LAFSI +L + GDVVD
Sbjct: 251 PDTAIDAEALERGTSVYLVDRTIPMLPEKLSNKVCSLRPHEDKLAFSILMELTTEGDVVD 310
Query: 617 RWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 676
I TVI S +L+Y+ AQD I+G G+P +DVV++ +
Sbjct: 311 YEICETVIHSKERLTYDRAQDYIEG------------GYPD---DKMAADVVQANR---- 351
Query: 677 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 736
++K + +R +GA+ + + + D+ GTP + V R N L EEFMLLAN+T A+
Sbjct: 352 LAKTITRRRMQEGAIDFGSDEVNVILDDDGTPTNIVRKERLQANRLIEEFMLLANRTVAK 411
Query: 737 VIARA------------FPDSALLRRHPAPNMRKLREFEAFCS--KHGLQL--DTSSSGQ 780
IA P + R H +P+ ++++ + H L L + S
Sbjct: 412 HIAAPEHVDRHRSNGTDEPLPFVYRVHDSPDSEEIQQLAEYVRVFDHELPLTDGNARSSD 471
Query: 781 FHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHF 840
+++ + + ++ +++ A R M A Y + GHY L F Y+HF
Sbjct: 472 LGALIDEVQGQPEE-----QVIVRAALRAMSKAEYAVG-------NIGHYGLGFDYYSHF 519
Query: 841 TSPLRRYPDLVVHRTL 856
TSP+RRYPDL+VHR L
Sbjct: 520 TSPIRRYPDLMVHRLL 535
>gi|67517975|ref|XP_658762.1| hypothetical protein AN1158.2 [Aspergillus nidulans FGSC A4]
gi|40747120|gb|EAA66276.1| hypothetical protein AN1158.2 [Aspergillus nidulans FGSC A4]
gi|259488524|tpe|CBF88028.1| TPA: cell wall biogenesis protein phosphatase Ssd1, putative
(AFU_orthologue; AFUA_1G11420) [Aspergillus nidulans FGSC
A4]
Length = 1374
Score = 231 bits (590), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 185/714 (25%), Positives = 325/714 (45%), Gaps = 63/714 (8%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R +F P+ + L G + RVN NR +AY + D+ I G +NRA
Sbjct: 428 RKTLFTPYLPQANLPALLSNGQLVSGVLRVNKKNRSDAYVTTPDLDADIFICGSKDRNRA 487
Query: 216 VEGDFVLIKV-DRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYS 274
+EGDFV +++ D +W++ K + ++ + +N + + S D
Sbjct: 488 LEGDFVAVELLDVDEVWSQKKEKEEKKKRKDITDARSASNAGTDKMSRSDSTGDRQEVGP 547
Query: 275 NCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAI 334
+ ++ + ++ N + +E EG + + SD + + + + I
Sbjct: 548 DGSIRRRGSLRQ---RPTQKKNDD-VEVEGQSLLLVEEDEISDEQKPLYAGHV---VAVI 600
Query: 335 ERLSAMISSYPTK--RPTGRVVSIIERSPR--RDGIVGFLNVNQWFNYKGGSRKDAKKNR 390
ER++ + S RP+ + + + R RDG G +D ++++
Sbjct: 601 ERIAGQMFSGTLGLLRPSSQATKEKQEAERLARDGA-------------HGRHQDRQQDK 647
Query: 391 SSLSVPDREYIQLTPTHPKYPKMVVLVKDLP-DSIKKRLEEGDATIEMELVAARIDEWNE 449
+ + PT + P + + + P D ++K + + + A I W
Sbjct: 648 PKI-------VWFKPTDKRVPLIAIPTEQAPRDFVEKHQDYAN-----RIFVACIKRWPI 695
Query: 450 ESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQE-ELLS 508
S P ++ G G+++ + A+L +N F+ L + W + E +L S
Sbjct: 696 TSLHPFGTLVEQLGEMGDLKVETEALLRDNNFGSDEFTDAVLKSIGWENWSISSEGDLSS 755
Query: 509 RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVR 568
R+D R FTI+P+ ++LD+A + L DG + +G+H+ D+++FV P + +D EA+ R
Sbjct: 756 RRDFRQETTFTIEPTGTSELDNAYHFKALPDGKAEIGIHVTDIAHFVKPNSLVDREAKKR 815
Query: 569 STSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR--WIGRTVIRS 626
T+VY++ R + MLP ++ E+ +L PG +RL S+ + N +D WIG+++I+S
Sbjct: 816 GTAVYLVDRLVKMLPPRIATELCALLPGEERLTVSVVFKANPETGAIDDDIWIGKSIIKS 875
Query: 627 CCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRF 686
KL ++ + +I G DV S V I+ L + ++ R
Sbjct: 876 SGKLGFDEVESVIKGTSDVPLSGV----------------SVDIIRGLQRTASKFREARL 919
Query: 687 TDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSA 746
+ ++ + + D+ P +S + G + L EE AN A + A PD A
Sbjct: 920 GNRVSQIPPLRLLHSLDDENVPVESNIFGSSAVRELVEELSCKANFLVARKLVAALPDKA 979
Query: 747 LLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYA 806
LRR +PN R+L F ++ G D SSS SL+ + K+KDD + + +
Sbjct: 980 FLRRQQSPNPRRLHSFVDRMNRLGFGFDESSS----GSLQSSLCKVKDDDLRKGMETIF- 1034
Query: 807 TRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
+ MQ A Y+ +G +D+ HY L PVYTHFT+PLRRY D++VHR L A L
Sbjct: 1035 VKSMQRAKYYVAGTVQDEM-RPHYTLNLPVYTHFTNPLRRYADVIVHRQLEAVL 1087
>gi|198274471|ref|ZP_03207003.1| hypothetical protein BACPLE_00619 [Bacteroides plebeius DSM 17135]
gi|198272673|gb|EDY96942.1| ribonuclease R [Bacteroides plebeius DSM 17135]
Length = 716
Score = 231 bits (590), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 148/426 (34%), Positives = 222/426 (52%), Gaps = 41/426 (9%)
Query: 443 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWEV 501
RI EW EE+ P V+ + G+ G+ +++AIL E + P+++ + + ++
Sbjct: 195 RITEWPEEAKNPFGEVIDILGKAGDNTTEMHAILAEYGLPY--VYPQAVEAAAEKLSADI 252
Query: 502 PQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTAL 561
E+ R+D R+ FTIDP A D DDALSI L G+ VGVHIADVS+++ G+ +
Sbjct: 253 TPEDYAEREDFRDVVTFTIDPKDAKDFDDALSIRTLKPGLWEVGVHIADVSHYIKEGSII 312
Query: 562 DIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGR 621
D EA R+TSVY++ R IPMLP L + SL P ++LA+S+ +++N +V + I
Sbjct: 313 DKEAAKRATSVYLVDRTIPMLPERLCNFICSLRPDEEKLAYSVIFEMNEKAEVKNYRIRH 372
Query: 622 TVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKIL 681
TVI+S + +YE AQ II+ GEG D + L +++IL
Sbjct: 373 TVIKSNRRFTYEEAQQIIE----------TGEG-----------DYKEEVLQLNRLAQIL 411
Query: 682 KDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARA 741
++KR G++ + + F DE G P ++ N L EEFMLLANKT AE + +
Sbjct: 412 REKRMAAGSINFDRCEVKFEIDETGKPLSVYFKVSKEANKLIEEFMLLANKTVAEYVGKV 471
Query: 742 FPDSAL----LRRHPAPNMRKLREFEAFCSKHGLQLDTSSS-GQFHQSLEQAREKL--KD 794
+ R H P+ KL F ++ G ++ T S + +S+ ++ K
Sbjct: 472 PKNKKPKVLPYRIHDLPDPDKLDNLNQFIARFGYKIRTGGSKAEVSKSINHLLGEIEGKK 531
Query: 795 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 854
+ L + + + R MQ A Y + GHY LAF YTHFTSP+RRYPDL+VHR
Sbjct: 532 EQNLIETV---SLRAMQKARYSI-------YNIGHYGLAFDYYTHFTSPIRRYPDLMVHR 581
Query: 855 TLNAAL 860
L L
Sbjct: 582 LLTRYL 587
>gi|422857998|ref|ZP_16904648.1| ribonuclease R [Streptococcus sanguinis SK1057]
gi|327460969|gb|EGF07302.1| ribonuclease R [Streptococcus sanguinis SK1057]
Length = 782
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 152/422 (36%), Positives = 228/422 (54%), Gaps = 30/422 (7%)
Query: 438 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAI-LYENAICCSGFSPESLSCLP 495
E++ ID++ ++ F A ++ V G + P I+ + + E+ S F + L
Sbjct: 180 EVLKVAIDKYPTKKHDFFVASLVDVVGHVND--PGIDVLEVLESMDIVSEFPEKVLEEAE 237
Query: 496 CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFV 555
VP + +L R DLR+ FTID + A DLDDA+ I+RL +G +GVHIADVSY+V
Sbjct: 238 RVPDAPTESDLAGRLDLRDEITFTIDGADAKDLDDAVHIKRLKNGNFELGVHIADVSYYV 297
Query: 556 LPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV 615
G+ LD EA R+TSVY+ R +PMLP LS + SLNP VDRL S ++++ G VV
Sbjct: 298 KEGSELDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPNVDRLTQSAIMEIDAKGRVV 357
Query: 616 DRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 675
I +TVI++ +++Y DII G + E + ++ +V SI S+
Sbjct: 358 KHTITQTVIKTIFRMTYSDVNDIIAG--NQEKAE-------------QFKAIVPSIDSMV 402
Query: 676 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 735
+ +IL+ RF GAL + ++ + ++ G P D VL R + E FML+AN+T A
Sbjct: 403 RLHEILESMRFKRGALNFDTNEAKIMVNKEGRPVDIVLRQRGIAERMIESFMLVANETVA 462
Query: 736 EVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 794
E A+ P + R H P K+++F + S G+++ ++S Q+L+ E +KD
Sbjct: 463 EHFAKLNLP--FIYRIHEEPKAEKVQKFIDYASTFGIRIYGTASSMSQQALQDIMEAVKD 520
Query: 795 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 854
D+L R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 Q-PYEDVLSMMLLRSMQQARY-------SEHNHGHYGLAAEFYTHFTSPIRRYPDLLVHR 572
Query: 855 TL 856
+
Sbjct: 573 MV 574
>gi|422884558|ref|ZP_16931006.1| ribonuclease R [Streptococcus sanguinis SK49]
gi|332358988|gb|EGJ36809.1| ribonuclease R [Streptococcus sanguinis SK49]
Length = 782
Score = 231 bits (589), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 153/441 (34%), Positives = 237/441 (53%), Gaps = 30/441 (6%)
Query: 438 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAI-LYENAICCSGFSPESLSCLP 495
E++ ID++ ++ F A ++ V G + P I+ + + E+ S F + L
Sbjct: 180 EVLKVAIDKYPTKKHDFFVASLVDVVGHVND--PGIDVLEVLESMDIVSEFPEKVLEEAE 237
Query: 496 CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFV 555
VP + +L R DLR FTID + A DLDDA+ I+RL +G +GVHIADVSY+V
Sbjct: 238 RVPDAPTESDLEGRLDLREEITFTIDGADAKDLDDAVHIKRLKNGNFELGVHIADVSYYV 297
Query: 556 LPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV 615
G+ LD EA R+TSVY+ R +PMLP LS + SLNP VDRL S ++++ G VV
Sbjct: 298 KEGSELDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPNVDRLTQSAIMEIDAKGRVV 357
Query: 616 DRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 675
I +TVI++ +++Y DII G + E + ++ +V SI S+
Sbjct: 358 KHAITQTVIKTTFRMTYSDVNDIIAG--NQEKAE-------------QFKAIVPSIDSMV 402
Query: 676 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 735
++ +IL+ RF GAL + ++ + ++ G P D VL R + E FML+AN+T A
Sbjct: 403 QLHEILESMRFKRGALNFDTNEAKIMVNKEGRPVDIVLRQRGIAERMIESFMLVANETVA 462
Query: 736 EVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 794
E A+ P + R H P K+++F + S G+++ ++S Q+L+ E +KD
Sbjct: 463 EHFAKLNLP--FIYRIHEEPKAEKVQKFIDYASSFGIRIYGTASSMSQQALQDIMEAVKD 520
Query: 795 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 854
D+L R MQ A Y + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 Q-PYEDVLSMMLLRSMQQARY-------SKHNHGHYGLAAEFYTHFTSPIRRYPDLLVHR 572
Query: 855 TLNAALEAEKLYWKHRRMLPK 875
+ +++++ +++P+
Sbjct: 573 MVRDYGKSKEIAEHFEQVIPE 593
>gi|422878365|ref|ZP_16924831.1| ribonuclease R [Streptococcus sanguinis SK1059]
gi|422928219|ref|ZP_16961161.1| ribonuclease R [Streptococcus sanguinis ATCC 29667]
gi|422931215|ref|ZP_16964146.1| ribonuclease R [Streptococcus sanguinis SK340]
gi|332367339|gb|EGJ45074.1| ribonuclease R [Streptococcus sanguinis SK1059]
gi|339617364|gb|EGQ21990.1| ribonuclease R [Streptococcus sanguinis ATCC 29667]
gi|339620397|gb|EGQ24967.1| ribonuclease R [Streptococcus sanguinis SK340]
Length = 782
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 153/441 (34%), Positives = 239/441 (54%), Gaps = 30/441 (6%)
Query: 438 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAI-LYENAICCSGFSPESLSCLP 495
E++ ID++ ++ F A ++ V G + P I+ + + E+ S F + L
Sbjct: 180 EVLKVAIDKYPTKKHDFFVASLVDVVGHVND--PGIDVLEVLESMDIVSEFPEKVLEEAE 237
Query: 496 CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFV 555
VP + +L R DLR+ FTID + A DLDDA+ I+RL +G +GVHIADVSY+V
Sbjct: 238 RVPDAPTESDLEGRLDLRDEITFTIDGADAKDLDDAVHIKRLKNGNFELGVHIADVSYYV 297
Query: 556 LPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV 615
G+ LD EA R+TSVY+ R +PMLP LS + SLNP VDRL S ++++ G VV
Sbjct: 298 KEGSELDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPNVDRLTQSAIMEIDAKGCVV 357
Query: 616 DRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 675
I +TVI++ +++Y DII G + E + ++ ++V SI S+
Sbjct: 358 KHTITQTVIKTTFRMTYSDVNDIIAG--NQEKAE-------------QFKEIVPSIDSMV 402
Query: 676 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 735
+ +IL+ RF GAL + ++ + ++ G P D VL R + E FML+AN+T A
Sbjct: 403 RLHEILESMRFKRGALNFDTNEAKIMVNKEGRPVDIVLRQRGISERMIESFMLVANETVA 462
Query: 736 EVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 794
E A+ P + R H P K+++F + S G+++ ++S Q+L+ E +KD
Sbjct: 463 EHFAKLNLP--FIYRIHEEPKAEKVQKFIDYASSFGIRIYGTASSMSQQALQDIMEAVKD 520
Query: 795 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 854
D+L R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 Q-PYEDVLSMMLLRSMQQARY-------SEHNHGHYGLAAEFYTHFTSPIRRYPDLLVHR 572
Query: 855 TLNAALEAEKLYWKHRRMLPK 875
+ +++++ +++P+
Sbjct: 573 MVRDYGKSKEIAEHFEQVIPE 593
>gi|380022076|ref|XP_003694881.1| PREDICTED: DIS3-like exonuclease 2-like [Apis florea]
Length = 771
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 140/438 (31%), Positives = 226/438 (51%), Gaps = 33/438 (7%)
Query: 433 ATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLS 492
++ E L I +W + F + + G G++ + NAIL E + + +SP+ +
Sbjct: 215 SSYEDTLYLVVITDWIKPK-FAVGKIEKIVGNIGDIRTESNAILLEYDLDITPYSPDVIK 273
Query: 493 CLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVS 552
LP + + + +L R+D R CIFTIDP A DLDD++S + L + +GVHI+DV+
Sbjct: 274 GLPSSDYILTENDLRDREDWRQECIFTIDPDAAVDLDDSVSCKILENENYEIGVHISDVT 333
Query: 553 YFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAG 612
+++ + LDI+ R+T++YM MLP L ++ SL+P + + F
Sbjct: 334 HYMEFLSPLDIQVSKRATTIYMTDNVYHMLPKQLC-QICSLSPEIVKYRF---------- 382
Query: 613 DVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIK 672
+TVIRSCC++SY HAQ I+ N + + + G F ++D+ +
Sbjct: 383 -------AKTVIRSCCQMSYYHAQKFIEN-----PKNNWPDDFLSINGNFNFNDLSIKVN 430
Query: 673 SLYEVSKILKDKRFTDGALRLENSKPVFLFDEY-GTPYDSVLSGREDLNFLFEEFMLLAN 731
L+ ++ ++ KRF +GAL+++ K D G P + ++D N L EEFMLLAN
Sbjct: 431 ILHNLAIQMRKKRFQNGALQIDQPKLYVKIDRITGLPISYNIEEQKDSNRLIEEFMLLAN 490
Query: 732 KTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREK 791
T A + P++ALLR H P+ L + + G+ LD SS H S+ + +
Sbjct: 491 MTVATQLYTMIPETALLRNHREPSKHILTVTKDTLQRFGIHLDIKSSASLHASIRRYEQG 550
Query: 792 LKDDYVLFDILINY--------ATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSP 843
L+++ I + Y ++ M A+Y CS + + HYAL P+YTHFTSP
Sbjct: 551 LENENNETKITMKYRMMVINSLCSKAMTRATYICSSTVTAEEELRHYALNVPLYTHFTSP 610
Query: 844 LRRYPDLVVHRTLNAALE 861
+RRY D VVHR L + ++
Sbjct: 611 IRRYSDCVVHRLLYSTMK 628
Score = 41.6 bits (96), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Query: 152 QSEARCKIFAPHWSMEAVNEALEKGDAFKALY-----RVNAHNRLEAYCKIEGVQTDVLI 206
+S + + F H S + +++ L+ + A Y R+N AY + Q D+LI
Sbjct: 68 KSSKQKETFPRHISEKEIDKLLKNQNTNDAQYVEGYLRINPWCHKYAYLSLSDDQYDLLI 127
Query: 207 TGIAAQNRAVEGDFVLIKVDRLSLWAKMKGFSNNSSIV 244
G+ +NRA +GDFV+ +++ W +G + +V
Sbjct: 128 VGLRDRNRAFDGDFVVACINQPEKWQIHQGQKQKTGVV 165
>gi|385809169|ref|YP_005845565.1| exoribonuclease R [Ignavibacterium album JCM 16511]
gi|383801217|gb|AFH48297.1| Exoribonuclease R [Ignavibacterium album JCM 16511]
Length = 698
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 152/426 (35%), Positives = 215/426 (50%), Gaps = 42/426 (9%)
Query: 447 WNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEEL 506
W + P ++ V G+ G ++ +I +I E + F ++ + +E+ +L
Sbjct: 183 WESPTQNPIGEIIEVLGKPGSLDTEITSIAKEFGLKYR-FPANVVNESEEIVFEITTNDL 241
Query: 507 LSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQ 566
R D R + TIDP A D DDALSIE+ G VG+HIADVS++V + LD EAQ
Sbjct: 242 KQRIDFRQKNVITIDPEDAKDFDDALSIEKNEKGNFIVGIHIADVSHYVDYDSYLDQEAQ 301
Query: 567 VRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRS 626
R SVY++ R IPMLP LS + SL P DRL +S+ ++ G +VD I +TVI S
Sbjct: 302 QRGNSVYLVGRVIPMLPENLSNNICSLVPNEDRLTYSVIVEMTPRGRIVDYQIKKTVINS 361
Query: 627 CCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRF 686
+ +Y+ Q II+ GEG D I +L ++KIL+ KR
Sbjct: 362 KRRFNYDEVQKIIET----------GEG-----------DFAEDILNLDTLAKILRRKRM 400
Query: 687 TDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA---RAFP 743
+G+ + F DEYG P ++ + +D N L EEFMLLANK A+ IA R
Sbjct: 401 KEGSFDFNTLEVKFKLDEYGIPLEAYIKSMKDSNMLVEEFMLLANKIVAQHIALPKRGEA 460
Query: 744 DSALLRRHPAPNMRKLREFEAFCSKHGLQLDTS---SSGQFHQSLEQAREKLKDDYVLFD 800
+ R H P+ K+ EF F G Q+ + + +F + L+Q + K ++
Sbjct: 461 KPFVYRVHDLPDQEKIMEFVRFVKSLGYQVSQNLIKKTSEFQKLLDQVKGKEEEP----- 515
Query: 801 ILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAA 859
LIN A R M A Y T+ GHY L F YTHFTSP+RRY DL+VHR L
Sbjct: 516 -LINELAIRSMAKAFY-------SPTNIGHYGLGFKYYTHFTSPIRRYSDLLVHRLLFKY 567
Query: 860 LEAEKL 865
+E +L
Sbjct: 568 IENPQL 573
>gi|422851224|ref|ZP_16897894.1| ribonuclease R [Streptococcus sanguinis SK150]
gi|325694812|gb|EGD36717.1| ribonuclease R [Streptococcus sanguinis SK150]
Length = 782
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 151/422 (35%), Positives = 228/422 (54%), Gaps = 30/422 (7%)
Query: 438 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAI-LYENAICCSGFSPESLSCLP 495
E++ ID++ ++ F A ++ V G + P I+ + + E+ S F + L
Sbjct: 180 EVLKVAIDKYPTKKHDFFVASLVDVVGHVND--PGIDVLEVLESMDIVSEFPEKVLEEAE 237
Query: 496 CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFV 555
VP + +L R DLR FTID + A DLDDA+ I+RL +G +GVHIADVSY+V
Sbjct: 238 RVPDAPTESDLAGRLDLREEITFTIDGADAKDLDDAVHIKRLKNGNFELGVHIADVSYYV 297
Query: 556 LPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV 615
G+ LD EA R+TSVY+ R +PMLP LS + SLNP VDRL S ++++ G VV
Sbjct: 298 KEGSELDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPNVDRLTQSAIMEIDAKGRVV 357
Query: 616 DRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 675
I +TVI++ +++Y DII G + E + ++ +V SI S+
Sbjct: 358 KHTITQTVIKTTFRMTYSDVNDIIAG--NQEKAE-------------QFKAIVPSIDSMV 402
Query: 676 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 735
++ +IL+ RF GAL + ++ + ++ G P D VL R + E FML+AN+T A
Sbjct: 403 QLHEILESMRFKRGALNFDTNEAKIMVNKEGRPVDIVLRQRGIAERMIESFMLVANETVA 462
Query: 736 EVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 794
E A+ P + R H P K+++F + S G+++ +++ Q+L+ E +KD
Sbjct: 463 EHFAKLNLP--FIYRIHEEPKAEKVQKFIDYASSFGIRIYGTANSMSQQALQDIMEAVKD 520
Query: 795 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 854
D+L R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 Q-PYEDVLSMMLLRSMQQARY-------SEHNHGHYGLAAEFYTHFTSPIRRYPDLLVHR 572
Query: 855 TL 856
+
Sbjct: 573 MV 574
>gi|240278803|gb|EER42309.1| exosomal 3'-5' exoribonuclease complex [Ajellomyces capsulatus
H143]
Length = 1058
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 162/524 (30%), Positives = 253/524 (48%), Gaps = 56/524 (10%)
Query: 351 GRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDRE-----YIQLTP 405
G VV++IER D K + + A+ S DR+ + P
Sbjct: 282 GHVVAVIERVAASD------------KEKQEAERQARDGGHSRHHHDRQQDKPKIVWFKP 329
Query: 406 THPKYPKMVVLVKDLP-DSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGR 464
T + P + + + P D ++K E + + A I W S P ++ G
Sbjct: 330 TDKRVPLIAIPTEQAPRDFVEKHAEYAN-----NIFVACIKRWPITSLHPFGTLVEQLGA 384
Query: 465 GGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEE---LLSRKDLRNFCIFTID 521
G ++ + +A+L +N FS L + W V E L +R+D R FTID
Sbjct: 385 MGNLKVETDALLRDNNFASDEFSDAVLKNVGFEKWSVKDEGEALLENRRDFRGETTFTID 444
Query: 522 PSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPM 581
P+ +LDDA+ ++ L DG VG+H+ADV++F+ + +D EA+ R T VY++ R + M
Sbjct: 445 PNGYKELDDAIHVKSLPDGKVEVGIHVADVAHFIKSNSLVDREAKKRGTGVYLMNRVVNM 504
Query: 582 LPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR--WIGRTVIRSCCKLSYEHAQDII 639
+P L+ E+ SL PG +RL S+ + +NSA V+ WIG+ VI+S KL+Y+ I+
Sbjct: 505 IPPRLATEICSLLPGEERLTVSVIFQVNSATGSVEGEPWIGKGVIKSSGKLTYDEVDAIL 564
Query: 640 DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPV 699
+G DVE L+G IK+L +++ K RF + + + + + +
Sbjct: 565 NGNSDVE-----------LHGA-----TANDIKTLSDIASKFKKARFGNRSSNIPSLRLL 608
Query: 700 FLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKL 759
+ D+ P + + + L EE AN A+ + A PD A LRR PN+R+L
Sbjct: 609 YQLDDENVPVEQNIFNSTPAHELIEELSHKANSFVAKKLLSAIPDKAFLRRQAPPNVRRL 668
Query: 760 REFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYAT---RPMQLASYF 816
+ F ++ G +D +SSG SL K++D DI T + MQ A Y+
Sbjct: 669 QTFVDRMTRLGYDIDPTSSGTLQTSL----FKIED----VDIRKGMETLLLKAMQRAKYY 720
Query: 817 CSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
+G+ +D HY L PVYTHFT+P RRY D++VHR L A L
Sbjct: 721 VAGNMTEDQRQ-HYVLNLPVYTHFTNPSRRYADIIVHRQLEAVL 763
Score = 48.5 bits (114), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R +F P+ ++ L G + RVN NR +AY + D+ I G +NRA
Sbjct: 114 RKTLFTPYLPQASLPALLNDGQLVAGILRVNKKNRSDAYVTTPDLDADIFICGSKDRNRA 173
Query: 216 VEGDFVLIK-VDRLSLWAK 233
+EGD V ++ +D +W++
Sbjct: 174 LEGDLVAVELLDVDEVWSQ 192
>gi|313891252|ref|ZP_07824870.1| ribonuclease R [Streptococcus pseudoporcinus SPIN 20026]
gi|416851989|ref|ZP_11909134.1| ribonuclease R [Streptococcus pseudoporcinus LQ 940-04]
gi|313120319|gb|EFR43440.1| ribonuclease R [Streptococcus pseudoporcinus SPIN 20026]
gi|356739478|gb|EHI64710.1| ribonuclease R [Streptococcus pseudoporcinus LQ 940-04]
Length = 783
Score = 230 bits (587), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 196/661 (29%), Positives = 314/661 (47%), Gaps = 84/661 (12%)
Query: 226 DRLSLWAKMKGFSNNSSIVEDSNLPTEAN--GMHSDICKGKSKVDVSYEYSNCTLLSEKG 283
+++ ++ K G SN + I + + +I K +SK + + C L +G
Sbjct: 3 EKIMMYLKEHGKSNINDIAASLGMAGAKKFPSLIKEISKMESKRLLRFSDDGCITLRRQG 62
Query: 284 IHHDDDSSSEAYNQEMIE--REGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMI 341
D E Q + + G+ ++ +D+ + + + + G L ++
Sbjct: 63 -----DKKKEMTIQGIFRANKAGFGFLQ-----VTDTEDDMFIGKNDVGYAIDGDLVEVV 112
Query: 342 SSYPTKRPTG-----RVVSIIERSPRRDGIVG-FLNVNQWFNYKGGSRKDAKKNRSSLSV 395
P R G +VV IIER+ R +VG F+ ++ Y G + +K V
Sbjct: 113 VKKPADRLKGTAAEAKVVGIIERALRT--VVGKFILDDEKPKYAGYIKSKNQK------V 164
Query: 396 PDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEW-NEESPFP 454
+ YI+ P VVL D T E++ I+++ +
Sbjct: 165 QQKIYIKKEP--------VVL---------------DGT---EIIKVDIEKYPTRGHDYF 198
Query: 455 QAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQ-EELLSRKDLR 513
A+V + G G+V + +L E+ S F PE++ E P ++L+ R DLR
Sbjct: 199 IANVRDIVGHQGDVGIDVLEVL-ESMDIVSEF-PETVIAEANAISEAPSAKDLIGRVDLR 256
Query: 514 NFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVY 573
FTID + A DLDDA+ I+ L++G +GVHIADVSY+V G+ALD EA R TSVY
Sbjct: 257 KEITFTIDGADAKDLDDAIHIKPLANGNYELGVHIADVSYYVTEGSALDQEAIARGTSVY 316
Query: 574 MLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYE 633
+ R +PMLP LS + SLNP VDRL S +++S G V++ +I ++VI + +++Y
Sbjct: 317 VTDRVVPMLPECLSNGICSLNPNVDRLTQSAIMEIDSNGKVLNHYICQSVINTTFRMTYS 376
Query: 634 HAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRL 693
D++ G D E+ E+ + S++ + ++ KIL+ R GAL
Sbjct: 377 AVNDMLAG--DEETLQ-------------EYGAISESVEHMAKLHKILETMRLKRGALNF 421
Query: 694 ENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARA-FPDSALLRRHP 752
+ S+ L +E G P D V+ R + E FML+AN+ AE AR +P + R H
Sbjct: 422 DTSEARILVNEKGMPVDIVVRTRGIAERMIESFMLVANECVAEHFARGHYP--FIYRVHE 479
Query: 753 APNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQL 812
P KL++F + S G+Q+ +++ ++L+ K+ D ++L R MQ
Sbjct: 480 EPKSEKLQKFIDYASVFGIQIKGTAAKISQEALQDFMAKV-DGKPGAEVLNMMLLRSMQQ 538
Query: 813 ASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRM 872
A Y +T+ GHY LA YTHFTSP+RRYPDL+VHR + +A + H M
Sbjct: 539 ARY-------SETNHGHYGLAADYYTHFTSPIRRYPDLLVHRMIREYSQATEDKRDHFAM 591
Query: 873 L 873
+
Sbjct: 592 I 592
>gi|340377383|ref|XP_003387209.1| PREDICTED: DIS3-like exonuclease 1 [Amphimedon queenslandica]
Length = 1002
Score = 230 bits (587), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 178/520 (34%), Positives = 260/520 (50%), Gaps = 46/520 (8%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 407
RPTGRVV I+ RS RD I F + NYK E + + P
Sbjct: 291 RPTGRVVGILLRS-NRDIIASFPEESASSNYK------------------LEKVLVIPYD 331
Query: 408 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 467
+ PK+ I RL ++ + R D W+ S +P H + G G+
Sbjct: 332 IRIPKI---------RISTRLSN---ELKHHRIVVRFDNWDINSYYPNGHFVRSIGPIGD 379
Query: 468 VEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEELLSRKDLR-NFCIFTIDPSTA 525
E +I AIL EN + S F+ LS LP W++ ++EL +R DLR + I++IDP
Sbjct: 380 TETEIQAILIENELSTSSFTQSILSELPDGDSWKIEEKELKNRIDLRESHLIYSIDPKGC 439
Query: 526 TDLDDALSIERLSDG---ISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPML 582
D+DD LS+ + G +GVHIADVSYFV G+ D EA+ RST+VY+ R+ ML
Sbjct: 440 EDVDDTLSVRLVYSGHFKFIELGVHIADVSYFVRSGSYTDREARERSTTVYLADRRYDML 499
Query: 583 PVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW-IGRTVIRSCCKLSYEHAQDII-- 639
P +LS + SL VDR A S+ LN ++ + RT+IRS KL+YE AQD+
Sbjct: 500 PAVLSSNLCSLLSNVDRYAVSVLCRLNPRDFSIESVSVRRTIIRSAYKLTYEVAQDLFED 559
Query: 640 -DGKFDVESSNTLGEG--WPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENS 696
D K+ ++S L E P + + SD+ +SIK L E++++L++KR +GA+ LE
Sbjct: 560 KDDKYIIDSIPELSESKLTPSELAK-KVSDLRQSIKKLVEIARVLREKRNRNGAVELEGV 618
Query: 697 KPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNM 756
+ + D + +++ E M+ AN+ A+ I+ P ALLR H AP
Sbjct: 619 EVKIQMTDKDNIDDIIPKKVLEVHETVAECMIFANELVAKDISLHLPSKALLRSHAAPPQ 678
Query: 757 RKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYF 816
+ ++ S +D S+ + QSL +A + D + +L AT+ M A Y
Sbjct: 679 DQFSLLKSCASARNYTIDARSNFKLAQSLNKAVDVT--DPEVNKVLRMLATQAMIQALYT 736
Query: 817 CSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTL 856
+G + HY L YTHFTSP+RRY DL+VHR L
Sbjct: 737 STGP-GSNHHLSHYGLGIKHYTHFTSPIRRYADLLVHRQL 775
>gi|125718408|ref|YP_001035541.1| VacB/Rnb family exoribonuclease [Streptococcus sanguinis SK36]
gi|125498325|gb|ABN44991.1| Exoribonuclease, VacB/Rnb family, putative [Streptococcus sanguinis
SK36]
Length = 782
Score = 230 bits (587), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 151/441 (34%), Positives = 238/441 (53%), Gaps = 30/441 (6%)
Query: 438 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAI-LYENAICCSGFSPESLSCLP 495
E++ ID++ ++ F A ++ V G + P I+ + + E+ S F + L
Sbjct: 180 EVLKVAIDKYPTKKHDFFVASLVDVVGHVND--PGIDVLEVLESMDIVSEFPEKVLEEAE 237
Query: 496 CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFV 555
VP + +L R DLR FTID + A DLDDA+ I+RL +G +GVHIADVSY+V
Sbjct: 238 RVPEAPTESDLAGRLDLREEITFTIDGADAKDLDDAVHIKRLKNGNFELGVHIADVSYYV 297
Query: 556 LPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV 615
G+ LD +A R+TSVY+ R +PMLP LS + SLNP VDRL S ++++ G VV
Sbjct: 298 KEGSELDKDALNRATSVYVTDRVVPMLPERLSNGICSLNPNVDRLTQSAIMEIDAKGRVV 357
Query: 616 DRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 675
I +TVI++ +++Y DII G + E + ++ +V SI S+
Sbjct: 358 KNTITQTVIKTTFRMTYSDVNDIIAG--NQEKAE-------------QFKAIVPSIDSMV 402
Query: 676 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 735
++ +IL+ RF GAL + ++ + ++ G P D VL R + E FML+AN+T A
Sbjct: 403 QLHEILESMRFKRGALNFDTNEAKIMVNKEGRPVDIVLRQRGIAERMIESFMLVANETVA 462
Query: 736 EVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 794
E A+ P + R H P K+++F + S G+++ +++ Q+L+ E +KD
Sbjct: 463 EHFAKLNLP--FIYRIHEEPKAEKVQKFIDYASSFGIRIYGTANSMSQQALQDIMEAVKD 520
Query: 795 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 854
D+L R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 Q-PYEDVLSMMLLRSMQQARY-------SEHNHGHYGLAAEFYTHFTSPIRRYPDLLVHR 572
Query: 855 TLNAALEAEKLYWKHRRMLPK 875
+ +++++ +++P+
Sbjct: 573 MVRDYSKSKEIAEHFEQVIPE 593
>gi|322385827|ref|ZP_08059470.1| ribonuclease R [Streptococcus cristatus ATCC 51100]
gi|417922355|ref|ZP_12565843.1| ribonuclease R [Streptococcus cristatus ATCC 51100]
gi|321270112|gb|EFX53029.1| ribonuclease R [Streptococcus cristatus ATCC 51100]
gi|342832452|gb|EGU66747.1| ribonuclease R [Streptococcus cristatus ATCC 51100]
Length = 782
Score = 230 bits (586), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 153/441 (34%), Positives = 235/441 (53%), Gaps = 30/441 (6%)
Query: 438 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAI-LYENAICCSGFSPESLSCLP 495
E++ ID++ ++ F A ++ V G + P I+ + + E+ S F + L
Sbjct: 180 EVLKVAIDKYPTKKHDFFVASLIDVVGHVND--PGIDVLEVLESMDIVSEFPEKVLEEAE 237
Query: 496 CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFV 555
VP + + R DLR FTID + A DLDDA+ I+RL +G +GVHIADVSY+V
Sbjct: 238 RVPDAPSENDFEGRVDLREEITFTIDGADAKDLDDAVHIKRLKNGHFELGVHIADVSYYV 297
Query: 556 LPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV 615
G+ LD EA R+TSVY+ R +PMLP LS + SLNP VDRL S ++++ G VV
Sbjct: 298 KEGSELDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPNVDRLTQSAIMEIDAKGRVV 357
Query: 616 DRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 675
I +TVI + +++Y DII G D E + ++ +V SI S+
Sbjct: 358 KHIITQTVINTTFRMTYSDVNDIIAG--DQEKAE-------------QFKAIVPSIDSMV 402
Query: 676 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 735
+ +IL+ RF GAL + ++ + ++ G P D VL R + E FML+AN+T A
Sbjct: 403 RLHEILESMRFKRGALNFDTNEAKIIVNKEGRPVDIVLRQRGIAERMIESFMLVANETVA 462
Query: 736 EVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 794
E A+ P + R H P K+++F + S G+++ ++S Q+L+ E +KD
Sbjct: 463 EHFAKLNLP--FIYRIHEEPKAEKVQKFIDYASSFGIRIYGTASSMSQQALQDIMEAVKD 520
Query: 795 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 854
D+L R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 Q-PYEDVLSMMLLRSMQQARY-------SEHNHGHYGLAAEFYTHFTSPIRRYPDLLVHR 572
Query: 855 TLNAALEAEKLYWKHRRMLPK 875
+ +++++ +++P+
Sbjct: 573 MVRDYGKSKEIAEHFEQVIPE 593
>gi|319789562|ref|YP_004151195.1| ribonuclease R [Thermovibrio ammonificans HB-1]
gi|317114064|gb|ADU96554.1| ribonuclease R [Thermovibrio ammonificans HB-1]
Length = 716
Score = 230 bits (586), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 188/572 (32%), Positives = 282/572 (49%), Gaps = 83/572 (14%)
Query: 300 IEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIER 359
+ REG+ +++ P V MN ++ R G++VS+IER
Sbjct: 85 VYREGFGFVD---PIDGGKGVFVPGRSMAGAMNGDIVAVEIVKEGREGRREGKIVSVIER 141
Query: 360 SPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQ--LTPTHPKYPKMVVLV 417
+ ++ +VG + +KG VP+ + I+ + TH
Sbjct: 142 AVKK--VVGRVE-----KHKG----------QCFVVPEDKRIRYDVILTHGDC------- 177
Query: 418 KDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINA-IL 476
K +E GD + +E+V+ + E+ P V+ G+ G P+++ ++
Sbjct: 178 --------KNVENGDYVV-VEIVS-----YPSETRGPVGKVVENLGKTG---PKLDIELI 220
Query: 477 YENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIER 536
+ F PE L +P EV +EE+ R DLR FTID A D DDA++IE+
Sbjct: 221 IRKYDLPTEFPPEVLEEAEQIPLEVSEEEVKGRVDLRQQLCFTIDGENARDFDDAVAIEK 280
Query: 537 LSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPG 596
L +G R+ VHIADVS++V PG+ALD EA R TSVY R IPMLP LS + SLNP
Sbjct: 281 LPNGNYRLFVHIADVSHYVKPGSALDREAYRRGTSVYFPDRCIPMLPERLSNGICSLNPN 340
Query: 597 VDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWP 656
VDRL F+ ++N G VVD I ++I S +L+Y AQ I+DG D E+ E +P
Sbjct: 341 VDRLTFTCEMEINKKGMVVDYKIYESIIHSKARLTYTIAQRILDG--DREAI----EQFP 394
Query: 657 QLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGR 716
VV S+K++ E++KIL KR+ G+L + +PV + + G P D + R
Sbjct: 395 H---------VVESLKTMLELAKILNKKRYKRGSLDFDLPEPVVVLNAEGEPVDIYKAER 445
Query: 717 EDLNFLFEEFMLLANKTAAEVIA-RAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDT 775
+ + EEFM+ AN+T AE + +P ++ R H +P+ KL+EF F G+++
Sbjct: 446 LWSHRIIEEFMIAANETVAEYMFWTDYP--SIYRVHESPDREKLQEFLNFVRSLGIRVPA 503
Query: 776 SSS----GQFHQSLEQAREKLKDDYVLFDILINY-ATRPMQLASYFCSGDFKDDTDWGHY 830
+ + LEQ K ++ L+NY R M A Y S D + GH+
Sbjct: 504 VKNDIQPKLLQKILEQVEGKPEEK------LVNYLMLRTMARAKY--SPD-----NIGHF 550
Query: 831 ALAFPVYTHFTSPLRRYPDLVVHRTLNAALEA 862
LA YTHFTSP+RRY DL +HR + AL+
Sbjct: 551 GLASTYYTHFTSPIRRYADLQLHRLVKMALKG 582
>gi|188586620|ref|YP_001918165.1| ribonuclease R [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179351307|gb|ACB85577.1| ribonuclease R [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 709
Score = 230 bits (586), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 150/443 (33%), Positives = 228/443 (51%), Gaps = 41/443 (9%)
Query: 440 VAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVP 498
V A+I W + + P+ ++ V G + I I+ + + + P+ L VP
Sbjct: 178 VVAQITGWPDTPAKNPEGEIIKVIGNPSDPGVDIETIINKYGLS-EDYPPKVKEQLEEVP 236
Query: 499 WEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPG 558
E+ ++ R+ ++ TID S A DLDDA+S+E+L +G +GVHIADVSY+V G
Sbjct: 237 NEISPKDYEGRELIQGLPTVTIDGSDAKDLDDAVSLEKLDNGNMELGVHIADVSYYVREG 296
Query: 559 TALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW 618
T LD EA+ R TSVY++ R +PMLP LS + SLNPGV+RL S F +L GD+ +
Sbjct: 297 TPLDKEARQRGTSVYLVDRVLPMLPPKLSNNICSLNPGVERLTMSAFVELTEEGDIANYR 356
Query: 619 IGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVS 678
+ +VI+S +L+YE ++ DG ++E E +P DV + + +S
Sbjct: 357 LTPSVIKSNYRLTYEEVNELFDGSKEIE------EKYP---------DVAWMLFEMKTIS 401
Query: 679 KILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE-- 736
+ L+++RF +GA+ E +PV + D+ G P R L EEFMLLAN+ AE
Sbjct: 402 EKLRERRFDEGAIDFEFDEPVVVLDDQGKPESVEKRARGSAEKLIEEFMLLANRVVAEHH 461
Query: 737 -VIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSG-----QFHQSLEQARE 790
+ F + R H P+ K+ F F SK G L +F + LE+A++
Sbjct: 462 YNLDMPF----IYRVHEQPDDEKVSTFREFASKFGYYLPKPEGEEIYPIEFQKVLEEAKD 517
Query: 791 KLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDL 850
++ + +L R M+ A Y GH+ L+F YTHFTSP+RRYPDL
Sbjct: 518 TREERAISTMML-----RSMKQARYAAES-------LGHFGLSFQYYTHFTSPIRRYPDL 565
Query: 851 VVHRTLNAALEAEKLYWKHRRML 873
VVHR + + + L ++ L
Sbjct: 566 VVHRIMREIITKKDLKEARQKKL 588
>gi|188994260|ref|YP_001928512.1| ribonuclease R [Porphyromonas gingivalis ATCC 33277]
gi|188593940|dbj|BAG32915.1| ribonuclease R [Porphyromonas gingivalis ATCC 33277]
Length = 731
Score = 230 bits (586), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 153/430 (35%), Positives = 220/430 (51%), Gaps = 43/430 (10%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 499
V RI EW E+S P V V G G+ + ++NAIL E + + E +
Sbjct: 208 VIVRILEWPEQSKNPIGEVQAVLGPAGDNDAEMNAILAEFGLPYV-YPQEVEEAADRLDG 266
Query: 500 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 559
++ +EEL R+D R+ FTIDP A D DDA+S L D VGVHIADVS++V G
Sbjct: 267 KITEEELARREDFRSVLTFTIDPKDAKDFDDAISFRPLEDDCYEVGVHIADVSHYVTEGG 326
Query: 560 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 619
+D EA R+TS+Y++ R IPMLP L ++ SL P ++ A+S + +N V+D I
Sbjct: 327 IIDQEAYNRATSIYLVDRTIPMLPERLCNDLCSLRPDEEKYAYSCIFRMNDEAKVLDYRI 386
Query: 620 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 679
+VI+S + +YE AQ +I+ GEG D +I L E+++
Sbjct: 387 CHSVIKSDRRFAYEEAQAVIE----------TGEG-----------DCKEAILKLNELAQ 425
Query: 680 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 739
L+++RF +GA+ E + F DE G P ++ ++ N L EEFMLLAN+T A I
Sbjct: 426 RLREERFQNGAIAFERKEVRFEIDEKGRPLGVIVKESKEANKLIEEFMLLANRTVARHIG 485
Query: 740 RAF----PDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQ-----FHQSLEQARE 790
+ + R H P+ KL F + G +L T+ S + L+ +
Sbjct: 486 EETQGKRAKTFVYRIHDLPDPDKLETLSDFIRRFGYKLRTTGSNMEVSKSINSLLDNIQN 545
Query: 791 KLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDL 850
K ++ +++ A R M A Y S D + GHY LAF YTHFTSP+RRYPDL
Sbjct: 546 KPEE-----NLISTVAIRSMAKAIY--STD-----NIGHYGLAFDFYTHFTSPIRRYPDL 593
Query: 851 VVHRTLNAAL 860
+VHR L L
Sbjct: 594 MVHRLLTKYL 603
>gi|328786136|ref|XP_624734.3| PREDICTED: DIS3-like exonuclease 2-like [Apis mellifera]
Length = 769
Score = 230 bits (586), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 139/438 (31%), Positives = 226/438 (51%), Gaps = 33/438 (7%)
Query: 433 ATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLS 492
++ E L I +W + F + + G G++ + NAIL E + + +SP+ +
Sbjct: 213 SSYEDTLYLVVITDWIKPK-FAVGKIEKIVGNIGDIRTESNAILLEYDLDVTPYSPDIIK 271
Query: 493 CLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVS 552
LP + + + +L R+D R CIFTIDP A DLDD++S + L + +GVHI+DV+
Sbjct: 272 GLPSSDYILTENDLRDREDWRQECIFTIDPDAAVDLDDSVSCKILENENYEIGVHISDVT 331
Query: 553 YFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAG 612
+++ + LDI+ R+T++YM MLP L ++ SL+P + + F
Sbjct: 332 HYMEFLSPLDIQVSKRATTIYMTDNVYHMLPKQLC-QICSLSPEIVKYRF---------- 380
Query: 613 DVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIK 672
+T+IRSCC++SY HAQ I+ N + + + G F ++D+ +
Sbjct: 381 -------AKTIIRSCCQMSYYHAQKFIEN-----PKNNWPDDFLSINGNFNFNDLSIKVN 428
Query: 673 SLYEVSKILKDKRFTDGALRLENSKPVFLFDEY-GTPYDSVLSGREDLNFLFEEFMLLAN 731
L+ ++ ++ KRF +GAL+++ K D G P + ++D N L EEFMLLAN
Sbjct: 429 ILHNLAIQMRKKRFQNGALQIDQPKLYVKIDRITGLPISYNIEEQKDSNRLIEEFMLLAN 488
Query: 732 KTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREK 791
T A + P++ALLR H P+ L + + G+ LD SS H S+ + +
Sbjct: 489 MTVATQLYTMIPETALLRNHREPSKHILTVTKDTLQRFGIHLDIKSSASLHASIRRYEQG 548
Query: 792 LKDDYVLFDILINY--------ATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSP 843
L+++ I + Y ++ M A+Y CS + + HYAL P+YTHFTSP
Sbjct: 549 LENENNETKITMKYRMMVINSLCSKAMTRATYICSSTVTAEEELRHYALNVPLYTHFTSP 608
Query: 844 LRRYPDLVVHRTLNAALE 861
+RRY D VVHR L + ++
Sbjct: 609 IRRYSDCVVHRLLYSTMK 626
Score = 41.6 bits (96), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Query: 160 FAPHWSMEAVNEALEKGDAFKALY-----RVNAHNRLEAYCKIEGVQTDVLITGIAAQNR 214
F H S + +++ L+ + A Y R+N AY + Q D+LI G+ +NR
Sbjct: 74 FPRHISEKEIDKLLKNQNTNDAQYVEGYLRINPWCHKYAYLSLSDDQYDLLIVGLRDRNR 133
Query: 215 AVEGDFVLIKVDRLSLWAKMKGFSNNSSIV 244
A +GDFV+ +++ W +G + +V
Sbjct: 134 AFDGDFVVACINQPEKWQVHQGQKQKTGVV 163
>gi|189502641|ref|YP_001958358.1| hypothetical protein Aasi_1319 [Candidatus Amoebophilus asiaticus
5a2]
gi|189498082|gb|ACE06629.1| hypothetical protein Aasi_1319 [Candidatus Amoebophilus asiaticus
5a2]
Length = 718
Score = 229 bits (585), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 152/415 (36%), Positives = 210/415 (50%), Gaps = 37/415 (8%)
Query: 454 PQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLR 513
P+ ++ VFG GE + +I+ I+ E + F L+ + ++P+EE+ +RKD R
Sbjct: 211 PEGRIIEVFGPMGENDVEIHTIMAEFNLPTQ-FPENVLAETSAISIDIPKEEIAARKDFR 269
Query: 514 NFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVY 573
TIDP A D DDALS++ L +G VGVHIADVSY+V + +D EA R TSVY
Sbjct: 270 EVFTITIDPEDAKDFDDALSLKILPNGHIEVGVHIADVSYYVQENSLVDQEAFERGTSVY 329
Query: 574 MLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYE 633
++ R IPM+P LS E+ SL P DR AFS ++L+ G + W G TVI S +LSYE
Sbjct: 330 LVDRTIPMIPERLSNELCSLKPHEDRPAFSAVFELDKQGSLHHEWFGETVIHSDQRLSYE 389
Query: 634 HAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRL 693
AQ I + +++L E I +L ++K L+ RF GA+
Sbjct: 390 EAQQAI-----TQPTHSLHE----------------QITTLNNLAKKLRADRFKSGAINF 428
Query: 694 ENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARA-----FPDSALL 748
+ F D+ G P + ED + L EEFMLLANK A + R FP + +
Sbjct: 429 DTPSVKFQLDKQGRPLSILPKVSEDSHRLIEEFMLLANKRVALHVRRMKQGKQFP-TFVY 487
Query: 749 RRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATR 808
R H PN+ +L +F F + G + + QS+ E L I+ A R
Sbjct: 488 RTHDQPNLERLGDFALFVKQFGYSIKAEPQ-EIAQSINVLSEGLAGKPEA-HIIQTLAIR 545
Query: 809 PMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE 863
M A Y H+ LAF YTHFTSP+RRYPDL+VHR L L+ E
Sbjct: 546 LMAKALYTTEAK-------PHFGLAFEHYTHFTSPIRRYPDLLVHRLLKKYLKGE 593
>gi|84095046|dbj|BAE66713.1| hypothetical protein [Colletotrichum lagenaria]
Length = 956
Score = 229 bits (585), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 194/726 (26%), Positives = 321/726 (44%), Gaps = 86/726 (11%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEG--VQTDVLITGIAAQN 213
R +F P+ + L G + RVN NR +AY + + D+ I G +N
Sbjct: 11 RKTLFTPYLPQATLPALLGDGQLVSGVLRVNKKNRSDAYVSTQDGLLDADIFICGSKDRN 70
Query: 214 RAVEGDFVLIKV-DRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYE 272
RA+EGD V +++ D +W++ + + D++
Sbjct: 71 RALEGDLVAVELLDVDEVWSQKREKEEKKK-----------------------RKDITDT 107
Query: 273 YSNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMN 332
S T + ++DD++ E + R G P T+K + + +G +
Sbjct: 108 RSGSTNGQNQSSNNDDNTQQEGG----LRRRGSLR---QRP-----TQKKNDDVEVEGQS 155
Query: 333 AIERLSAMISSYPTKRPTGRVVSIIERSPRR--DGIVGFLN-VNQWFNYKGGSRKDAKKN 389
+ I+ G +V++IER + G +G L +Q K + + A+
Sbjct: 156 LLLVEEEEINDEAKPLYAGHIVAVIERVAGQMFSGTLGLLRPSSQATKEKQEAERAARDG 215
Query: 390 RSSLSVPDR-----EYIQLTPTHPKYPKMVVLVKDLP-DSIKKRLEEGDATIEMELVAAR 443
+S +R + + PT + P + + + P D ++K E D + A
Sbjct: 216 GNSRHQDNRTQEKPKIVWFKPTDKRVPLIAIPTEQAPRDFVEKHQEYAD-----RIFVAC 270
Query: 444 IDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQ 503
I W S P ++ GR G+++ + +A+L +N FS L + W + +
Sbjct: 271 IKRWPITSLHPFGTLVEQLGRMGDLKVETDALLRDNNFSSDEFSEAVLRSVGLQDWTLAK 330
Query: 504 EE---LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 560
E+ L +R+D R + T+D + +L +A+ I+ DG +G+HI DV++FV +
Sbjct: 331 EDETALAARRDFREEKVVTLDLDGSPELANAIHIKTQPDGKIDIGIHIPDVTHFVKSNSL 390
Query: 561 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV---DR 617
+D EA+ R T+V+++ R +LP + EV SL PG +RLA S+ + +N V D
Sbjct: 391 VDREAKKRGTAVHLVNRTCALLPPKIFGEVCSLTPGEERLAVSVLFRVNPLNGSVAEGDS 450
Query: 618 WIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEV 677
W+G+++I+S K++ + + G+ D W Q + I+ L V
Sbjct: 451 WVGKSIIKSTAKITIDEVDAALSGQSD----------WKHEGIQL------KDIQILNAV 494
Query: 678 SKILKDKRFTDGALRLENSKPVFLF---DEYGTPYDSVLSGREDLNFLFEEFMLLANKTA 734
++ + R G E P+ LF D+ P + L EE M AN
Sbjct: 495 AQKFTEARLGAGG---EPIAPLRLFQQLDDENIPIKHNIFDSTPGTELVEELMHKANAYV 551
Query: 735 AEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 794
A+ +A A P+ ALLRR PN R+L+ F + G +++TS SG H SL + D
Sbjct: 552 AQRLAEALPEKALLRRQGPPNARRLQTFADRMNAIGYEVETSGSGSLHNSLFKV-----D 606
Query: 795 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 854
D + + + MQ A YF +G W HYAL P+YTHFTSP RRY D++VHR
Sbjct: 607 DAEVRKGMETLVLKSMQRAKYFIAGKTVKQL-WPHYALNLPLYTHFTSPTRRYADIIVHR 665
Query: 855 TLNAAL 860
L AAL
Sbjct: 666 QLEAAL 671
>gi|281331165|dbj|BAI59007.1| hypothetical protein [Colletotrichum higginsianum]
Length = 1358
Score = 229 bits (585), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 192/732 (26%), Positives = 324/732 (44%), Gaps = 83/732 (11%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEG--VQTDVLITGIAAQN 213
R +F P+ + L G + RVN NR +AY + + D+ I G +N
Sbjct: 414 RKTLFTPYLPQATLPALLGDGQLVSGILRVNKKNRSDAYVSTQDGLLDADIFICGSKDRN 473
Query: 214 RAVEGDFVLIKV-DRLSLWAKMKGFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYE 272
RA+EGD V +++ D +W++ + DI +S
Sbjct: 474 RALEGDLVAVELLDVDEVWSQKREKEEKKK--------------RKDITDTRS------- 512
Query: 273 YSNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMN 332
+ S+ ++DD++ E I R G T+K + + +G +
Sbjct: 513 -GSTNGQSQSSGNNDDNTQQEGG----IRRRGS--------LRQRPTQKKNDDVEVEGQS 559
Query: 333 AIERLSAMISSYPTKRPTGRVVSIIERSPRR--DGIVGFLNVNQWFNYKGG----SRKDA 386
+ I+ G +V++IER + G +G L + + + +D
Sbjct: 560 LLLVEEEEINDEAKPLYAGHIVAVIERVAGQMFSGNLGLLRPSSQATKEKQEAERAARDG 619
Query: 387 KKNR--SSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARI 444
NR + S + + PT + P + + + P ++ ++ I A I
Sbjct: 620 GNNRHHDNRSQEKPKIVWFKPTDKRVPLIAIPTEQAPRDFVEKHQDYAGRI----FVACI 675
Query: 445 DEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQE 504
W S P ++ GR G+++ + +A+L +N FS L + W + +E
Sbjct: 676 KRWPITSLHPFGTLVEQLGRMGDLKVETDALLRDNNFSSDEFSEAVLRSVGLQDWSLDKE 735
Query: 505 E---LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTAL 561
+ L +R+D R+ + T+D + + +L +A+ I+ DG +G+HI DV++FV P + +
Sbjct: 736 DEAALAARRDFRDEKVVTLDLNGSPELANAIHIKTQPDGKIDIGIHIPDVTHFVKPNSLI 795
Query: 562 DIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV---DRW 618
D EA+ R T+V+++ R +LP + EV SL PG +RLA S+ + +N V D W
Sbjct: 796 DREAKKRGTAVHLVNRTCALLPPKIGGEVCSLAPGEERLAVSVLFRVNPHNGSVAEGDAW 855
Query: 619 IGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEW---SDVVRSIKSLY 675
+G+++I+S K++ D ID L GQ +W S ++ ++ L
Sbjct: 856 VGKSIIKSTAKITI----DEIDAA---------------LNGQADWKHESIQLKDVQILN 896
Query: 676 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 735
V++ + R G + + + D+ P + L EE M AN A
Sbjct: 897 AVAQKFTEARLGAGGEPIAPLRLLQQLDDENIPIKHNIFDSTPATELVEELMHKANSYVA 956
Query: 736 EVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDD 795
+ +A+A P+ ALLRR PN R+L+ F + G +++TS SG H SL + DD
Sbjct: 957 QRLAQALPEKALLRRQGPPNARRLQTFADRMNAIGYEVETSGSGSLHNSLFKV-----DD 1011
Query: 796 YVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRT 855
+ + + MQ A YF +G W HYAL P+YTHFTSP RRY D++VHR
Sbjct: 1012 ADVRKGMETLVLKSMQRARYFIAGKTAKQL-WPHYALNLPLYTHFTSPTRRYADIIVHRQ 1070
Query: 856 LNAALEAEKLYW 867
L AAL K+ +
Sbjct: 1071 LEAALSEGKIEY 1082
>gi|288928627|ref|ZP_06422473.1| ribonuclease R [Prevotella sp. oral taxon 317 str. F0108]
gi|288329611|gb|EFC68196.1| ribonuclease R [Prevotella sp. oral taxon 317 str. F0108]
Length = 732
Score = 229 bits (585), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 152/441 (34%), Positives = 239/441 (54%), Gaps = 24/441 (5%)
Query: 424 IKKRLEEGDATIEMELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAILYENAIC 482
+ KR +G T + +V ++ +W + E V+ V G GE + +++AIL + +
Sbjct: 175 VPKRKLKGGKTGDKAVV--KVTQWPDAEHKNIMGEVIDVLGPTGENDVEMHAILAQYGLP 232
Query: 483 CSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGIS 542
+ + + + E+ Q++ R+D RN TIDP A D DDALSI L G+
Sbjct: 233 YT-YPKAAEEAAERISAEITQKDYDEREDFRNVFTCTIDPRDAKDFDDALSIRMLDKGLW 291
Query: 543 RVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAF 602
+VGVHIADVS++V G+ +D EA R+TSVY++ R IPMLP L + SL P ++LA+
Sbjct: 292 QVGVHIADVSHYVTEGSIIDKEAMKRATSVYLVDRTIPMLPERLCNFICSLRPDEEKLAY 351
Query: 603 SIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQF 662
S+ ++++ D+ I TVI+S + +YE Q +++ V+ + P+ +
Sbjct: 352 SVIFNMDENADIKAYRIVHTVIKSDRRYAYEEVQQLLEDNGVVDGTGEPAPPAPKGGYKG 411
Query: 663 EWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFL 722
E +D S+ L +++K L++KRF +GA++ + + F DE G P + +D N L
Sbjct: 412 ENAD---SLIMLDKLAKKLREKRFKNGAVKFDREELHFDVDEQGKPIRAYFKRSKDANKL 468
Query: 723 FEEFMLLANKTAAEVIARA----FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSS 778
EEFMLLANKT AE + + P + R H P+ +KL F K G +L T+S+
Sbjct: 469 IEEFMLLANKTVAESVGKPKGGRTPKTLPYRIHDNPDPQKLENLREFIMKFGYKLKTTST 528
Query: 779 -GQFHQSLEQAREKL--KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFP 835
G+ +SL + +++ K + L + + A R M A Y + GH+ LAF
Sbjct: 529 KGETSRSLNKLMDEVAGKREQNLIETI---ALRAMMKAKYSIH-------NIGHFGLAFD 578
Query: 836 VYTHFTSPLRRYPDLVVHRTL 856
YTHFTSP+RRYPD +VHR L
Sbjct: 579 YYTHFTSPIRRYPDTMVHRLL 599
>gi|322372549|ref|ZP_08047085.1| ribonuclease R [Streptococcus sp. C150]
gi|321277591|gb|EFX54660.1| ribonuclease R [Streptococcus sp. C150]
Length = 817
Score = 229 bits (584), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 155/440 (35%), Positives = 230/440 (52%), Gaps = 35/440 (7%)
Query: 421 PDSIKKRLEEGDATIEMELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAILYEN 479
P IKK D T E++ I+++ N + V + G G+ + +L E+
Sbjct: 167 PIYIKKEPVALDGT---EIIKVDIEKYPNRHYDYFVGSVRDIIGHQGDAGIDVLEVL-ES 222
Query: 480 AICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSD 539
S F + ++ VP QE+L+ R DLR FTID + A DLDDA+ I+RL +
Sbjct: 223 MDIVSEFPEDVMAEAEAVPDAPSQEDLVGRVDLRQEVTFTIDGADAKDLDDAVHIKRLPN 282
Query: 540 GISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDR 599
G +GVHIADVSY+V G+AL+ EA R TSVY+ R +PMLP LS + SLNP VDR
Sbjct: 283 GNFELGVHIADVSYYVTEGSALNREAVARGTSVYVTDRVVPMLPERLSNGICSLNPNVDR 342
Query: 600 LAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLY 659
L S ++ G VV+ I ++VI + +++Y D++ G P+
Sbjct: 343 LTQSAIMEITPKGKVVNHKICQSVINTTFRMTYSDVNDMLAGN-------------PEKI 389
Query: 660 GQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDL 719
QF+ ++ S+ ++ E+ KIL+D R GAL + S+ L +E G P D V+ R
Sbjct: 390 EQFKP--IMDSVSAMAELHKILEDMRERRGALNFDTSEARILVNEKGMPVDIVVRERGTA 447
Query: 720 NFLFEEFMLLANKTAAEVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSS 778
+ E FML AN+ AE A+A P + R H P KL+ F + S G+Q+ +++
Sbjct: 448 ERMIESFMLAANECVAEHFAKAKLP--FIYRIHEEPKAEKLQRFMDYASIFGVQIKGTAN 505
Query: 779 GQFHQSLEQ--AREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPV 836
L++ AR + K + ++++ R MQ A Y + + GHY LA
Sbjct: 506 KMDQLDLQEFMARVQGKPGAEVMNMML---LRSMQQARY-------SEHNHGHYGLAAQY 555
Query: 837 YTHFTSPLRRYPDLVVHRTL 856
YTHFTSP+RRYPDL+VHR +
Sbjct: 556 YTHFTSPIRRYPDLLVHRMI 575
>gi|307708609|ref|ZP_07645073.1| ribonuclease R [Streptococcus mitis NCTC 12261]
gi|307615358|gb|EFN94567.1| ribonuclease R [Streptococcus mitis NCTC 12261]
Length = 784
Score = 229 bits (584), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 153/441 (34%), Positives = 238/441 (53%), Gaps = 30/441 (6%)
Query: 438 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC 496
E++ ID++ +++ F A VL V G +V + +L E+ S F +
Sbjct: 179 EVLKVFIDKYPSKKHDFFVASVLDVVGHSTDVGIDVLEVL-ESMDIVSEFPEAVVKEAES 237
Query: 497 VPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVL 556
VP Q+++ R DLR+ FTID + A DLDDA+ I+ L +G +GVHIADVSY+V
Sbjct: 238 VPDVPSQKDMEGRLDLRDEITFTIDGADAKDLDDAVHIKALKNGNLELGVHIADVSYYVT 297
Query: 557 PGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD 616
G+ALD EA R+TSVY+ R +PMLP LS + SLNP VDRL S +++ G VV+
Sbjct: 298 EGSALDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPQVDRLTQSAIMEIDKHGRVVN 357
Query: 617 RWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 676
I +TVI++ +++Y DI+ G DVE E+ +V SI+ + +
Sbjct: 358 YTITQTVIKTSFRMTYNDVNDILAG--DVEKRQ-------------EYQKIVPSIELMAK 402
Query: 677 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 736
+ +IL++ R GAL + ++ L D+ G P D VL R + E FML+AN+T AE
Sbjct: 403 LHEILENMRVKRGALNFDTNEAKILVDKQGKPVDIVLRQRGVAERMIESFMLMANETVAE 462
Query: 737 VIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDD 795
++ P + R H P K+++F + S GL++ ++S ++L+ ++ +
Sbjct: 463 HFSKLDLP--FIYRIHEEPKAEKVQKFIDYASSFGLRIYGTASEISQEALQDIMRAVEGE 520
Query: 796 -YVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 854
Y D+L R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 PYA--DVLSMMLLRSMQQARY-------SEHNHGHYGLAADYYTHFTSPIRRYPDLLVHR 571
Query: 855 TLNAALEAEKLYWKHRRMLPK 875
+ ++++ +++P+
Sbjct: 572 MIRDYSRSKEIAEHFEQVIPE 592
>gi|419970937|ref|ZP_14486407.1| ribonuclease R [Porphyromonas gingivalis W50]
gi|392609658|gb|EIW92462.1| ribonuclease R [Porphyromonas gingivalis W50]
Length = 731
Score = 229 bits (584), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 153/430 (35%), Positives = 219/430 (50%), Gaps = 43/430 (10%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 499
V RI EW E+S P V V G G+ + ++NAIL E + + E +
Sbjct: 208 VIVRILEWPEQSKNPIGEVQAVLGPAGDNDAEMNAILAEFGLPYV-YPQEVEEAADRLDG 266
Query: 500 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 559
++ +EEL R+D R+ FTIDP A D DDA+S L D VGVHIADVS++V G
Sbjct: 267 KITEEELARREDFRSILTFTIDPKDAKDFDDAISFRPLEDDCYEVGVHIADVSHYVTEGG 326
Query: 560 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 619
+D EA R+TS+Y++ R IPMLP L ++ SL P ++ A+S + +N V+D I
Sbjct: 327 IIDQEAYNRATSIYLVDRTIPMLPERLCNDLCSLRPDEEKYAYSCIFRMNDEAKVLDYRI 386
Query: 620 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 679
+VI+S + +YE AQ +I+ GEG D +I L E+++
Sbjct: 387 CHSVIKSDRRFAYEEAQAVIE----------TGEG-----------DCKEAILKLNELAQ 425
Query: 680 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 739
L+ +RF +GA+ E + F DE G P ++ ++ N L EEFMLLAN+T A I
Sbjct: 426 RLRKERFQNGAIAFERKEVRFEIDEKGRPLGVIVKESKEANKLIEEFMLLANRTVARHIG 485
Query: 740 RAF----PDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSG-----QFHQSLEQARE 790
+ + R H P+ KL F + G +L T+ S + L+ +
Sbjct: 486 EETQGKRAKTFVYRIHDLPDPDKLETLSDFIRRFGYKLRTTGSNVEVSKSINSLLDNIQN 545
Query: 791 KLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDL 850
K ++ +++ A R M A Y S D + GHY LAF YTHFTSP+RRYPDL
Sbjct: 546 KPEE-----NLISTVAIRSMAKAIY--STD-----NIGHYGLAFDFYTHFTSPIRRYPDL 593
Query: 851 VVHRTLNAAL 860
+VHR L L
Sbjct: 594 MVHRLLTKYL 603
>gi|34541350|ref|NP_905829.1| ribonuclease R [Porphyromonas gingivalis W83]
gi|34397666|gb|AAQ66728.1| ribonuclease R [Porphyromonas gingivalis W83]
Length = 702
Score = 229 bits (584), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 153/430 (35%), Positives = 219/430 (50%), Gaps = 43/430 (10%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 499
V RI EW E+S P V V G G+ + ++NAIL E + + E +
Sbjct: 179 VIVRILEWPEQSKNPIGEVQAVLGPAGDNDAEMNAILAEFGLPYV-YPQEVEEAADRLDG 237
Query: 500 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 559
++ +EEL R+D R+ FTIDP A D DDA+S L D VGVHIADVS++V G
Sbjct: 238 KITEEELARREDFRSILTFTIDPKDAKDFDDAISFRPLEDDCYEVGVHIADVSHYVTEGG 297
Query: 560 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 619
+D EA R+TS+Y++ R IPMLP L ++ SL P ++ A+S + +N V+D I
Sbjct: 298 IIDQEAYNRATSIYLVDRTIPMLPERLCNDLCSLRPDEEKYAYSCIFRMNDEAKVLDYRI 357
Query: 620 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 679
+VI+S + +YE AQ +I+ GEG D +I L E+++
Sbjct: 358 CHSVIKSDRRFAYEEAQAVIE----------TGEG-----------DCKEAILKLNELAQ 396
Query: 680 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 739
L+ +RF +GA+ E + F DE G P ++ ++ N L EEFMLLAN+T A I
Sbjct: 397 RLRKERFQNGAIAFERKEVRFEIDEKGRPLGVIVKESKEANKLIEEFMLLANRTVARHIG 456
Query: 740 RAF----PDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSG-----QFHQSLEQARE 790
+ + R H P+ KL F + G +L T+ S + L+ +
Sbjct: 457 EETQGKRAKTFVYRIHDLPDPDKLETLSDFIRRFGYKLRTTGSNVEVSKSINSLLDNIQN 516
Query: 791 KLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDL 850
K ++ +++ A R M A Y S D + GHY LAF YTHFTSP+RRYPDL
Sbjct: 517 KPEE-----NLISTVAIRSMAKAIY--STD-----NIGHYGLAFDFYTHFTSPIRRYPDL 564
Query: 851 VVHRTLNAAL 860
+VHR L L
Sbjct: 565 MVHRLLTKYL 574
>gi|342876175|gb|EGU77833.1| hypothetical protein FOXB_11697 [Fusarium oxysporum Fo5176]
Length = 958
Score = 229 bits (584), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 180/557 (32%), Positives = 262/557 (47%), Gaps = 80/557 (14%)
Query: 317 DSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWF 376
+ ++ + S ++ + R + +S +PT +VV +I+R+ R+ VG ++
Sbjct: 343 EESQDLVSEKERKALQEQVRKTQKSASESKPQPTAKVVGVIKRNWRQ--YVGHID----- 395
Query: 377 NYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIE 436
+ K + + R SV L P K PK+ + + + D + KRL
Sbjct: 396 --PSSASKGSSQGRKQDSV------FLIPMDKKIPKIRLRTRQVADLLGKRL-------- 439
Query: 437 MELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP- 495
LV ID W +S P H + G + A+L E + F L CLP
Sbjct: 440 --LVT--IDAWERDSRHPVGHFVRSLGELETKSAETEALLLEWDVQYRPFPKTVLDCLPR 495
Query: 496 -CVPWEVPQEE----LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIAD 550
W VP R+DLR I +IDP D+DDAL ++L +G VGVHIAD
Sbjct: 496 EGHDWRVPTSMEDPGWRQREDLRGLLICSIDPVGCQDIDDALHAKQLPNGNYEVGVHIAD 555
Query: 551 VSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNS 610
VS FV P A+D EA +R T+VY++ ++I MLP LL ++ SL P V+R AFS+ W+LN
Sbjct: 556 VSNFVKPANAMDTEASIRGTTVYLVDKRIDMLPPLLGTDLCSLKPYVERFAFSVLWELND 615
Query: 611 AGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRS 670
D+V+ ++VI+S SYE AQ ID + + D+ +
Sbjct: 616 NADIVNVRFTKSVIKSREAFSYEQAQLRID-------------------DESQQDDLTKG 656
Query: 671 IKSLYEVSKILKDKRFTDGALRLENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLL 729
++ L +SK LK KR GAL L + + V E P D D N L EEFML
Sbjct: 657 MRMLLMLSKKLKKKRMDAGALSLSSPEVKVQTESETSDPIDVKTKQLLDTNSLVEEFMLF 716
Query: 730 ANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAR 789
AN + A I AFP +A+LRRH AP + L + Q +++ S + AR
Sbjct: 717 ANVSVAAKIYEAFPQTAILRRHAAPQRQTLTNY---------QTNSAPSVAWSCGPTPAR 767
Query: 790 EKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPD 849
P+ YFCSG + ++ HY LA +YTHFTSP+RRY D
Sbjct: 768 -----------------PLPILWIKYFCSGT-QAYPEFRHYGLASEIYTHFTSPIRRYAD 809
Query: 850 LVVHRTLNAALEAEKLY 866
L+ HR L AA++ E ++
Sbjct: 810 LLAHRQLAAAIDYEAIH 826
>gi|334146390|ref|YP_004509317.1| ribonuclease R [Porphyromonas gingivalis TDC60]
gi|333803544|dbj|BAK24751.1| ribonuclease R [Porphyromonas gingivalis TDC60]
Length = 731
Score = 229 bits (584), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 153/430 (35%), Positives = 219/430 (50%), Gaps = 43/430 (10%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 499
V RI EW E+S P V V G G+ + ++NAIL E + + E +
Sbjct: 208 VIVRILEWPEQSKNPIGEVQAVLGPAGDNDAEMNAILAEFGLPYV-YPQEVEEAADRLDG 266
Query: 500 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 559
++ +EEL R+D R+ FTIDP A D DDA+S L D VGVHIADVS++V G
Sbjct: 267 KITEEELARREDFRSVLTFTIDPKDAKDFDDAISFRPLEDDCYEVGVHIADVSHYVTEGG 326
Query: 560 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 619
+D EA R+TS+Y++ R IPMLP L ++ SL P ++ A+S + +N V+D I
Sbjct: 327 IIDQEAYNRATSIYLVDRTIPMLPERLCNDLCSLRPDEEKYAYSCIFRMNDEAKVLDYRI 386
Query: 620 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 679
+VI+S + +YE AQ +I+ GEG D +I L E+++
Sbjct: 387 CHSVIKSDRRFAYEEAQAVIE----------TGEG-----------DCKEAILKLNELAQ 425
Query: 680 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 739
L+ +RF +GA+ E + F DE G P ++ ++ N L EEFMLLAN+T A I
Sbjct: 426 RLRKERFQNGAIAFERKEVRFEIDEKGRPLGVIVKESKEANKLIEEFMLLANRTVARHIG 485
Query: 740 RAF----PDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSG-----QFHQSLEQARE 790
+ + R H P+ KL F + G +L T+ S + L+ +
Sbjct: 486 EETQGKRAKTFVYRIHDLPDPDKLETLSDFIRRFGYKLRTTGSNVEVSKSINSLLDNIQN 545
Query: 791 KLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDL 850
K ++ +++ A R M A Y S D + GHY LAF YTHFTSP+RRYPDL
Sbjct: 546 KPEE-----NLISTVAIRSMAKAIY--STD-----NIGHYGLAFDFYTHFTSPIRRYPDL 593
Query: 851 VVHRTLNAAL 860
+VHR L L
Sbjct: 594 MVHRLLTKYL 603
>gi|445374334|ref|ZP_21426382.1| exoribonuclease R [Streptococcus thermophilus MTCC 5460]
gi|445388839|ref|ZP_21428097.1| exoribonuclease R [Streptococcus thermophilus MTCC 5461]
gi|444750587|gb|ELW75389.1| exoribonuclease R [Streptococcus thermophilus MTCC 5461]
gi|444750684|gb|ELW75480.1| exoribonuclease R [Streptococcus thermophilus MTCC 5460]
Length = 817
Score = 229 bits (584), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 151/434 (34%), Positives = 231/434 (53%), Gaps = 33/434 (7%)
Query: 428 LEEGDATIE-MELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSG 485
+++G +E E++ I+++ N + V + G G+ + +L E+ S
Sbjct: 170 IKKGPVALEGTEIIKVDIEKYPNRHHDYFVGSVRDIIGHQGDAGIDVLEVL-ESMDIVSE 228
Query: 486 FSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVG 545
F + ++ VP QE+L+ R DLR FTID + A DLDDA+ I+RL +G +G
Sbjct: 229 FPEDVIAEAEAVPDAPSQEDLIGRVDLRQEVTFTIDGADAKDLDDAVHIKRLPNGNYELG 288
Query: 546 VHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIF 605
VHIADVSY+V G+AL+ EA R TSVY+ R +PMLP LS + SLNP VDRL S
Sbjct: 289 VHIADVSYYVTEGSALNREAAARGTSVYVTDRVVPMLPERLSNGICSLNPNVDRLTLSAI 348
Query: 606 WDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWS 665
++ G V++ I ++VI++ +++Y DV N + G P+ QF+
Sbjct: 349 MEITPKGKVINHKICQSVIKTTFRMTYS----------DV---NEMLAGNPEKIEQFKP- 394
Query: 666 DVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEE 725
++ S+ ++ E+ KIL+D R GAL + S+ L ++ G P D V+ R + E
Sbjct: 395 -IMDSVSAMAELHKILEDMRERRGALNFDTSEARILVNDKGMPVDIVVRERGTAERMIES 453
Query: 726 FMLLANKTAAEVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQS 784
FML AN+ AE A+A P + R H P KL+ F + S G+Q+ +++
Sbjct: 454 FMLAANECVAEHFAKAKLP--FIYRIHEEPKAEKLQRFMDYASIFGIQIKGTATKMDQLD 511
Query: 785 LE--QAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTS 842
L+ AR + K + ++++ R MQ A Y + + GHY LA YTHFTS
Sbjct: 512 LQDFMARVQGKPGAEVMNMML---LRSMQQARY-------SEHNHGHYGLAAQYYTHFTS 561
Query: 843 PLRRYPDLVVHRTL 856
P+RRYPDL+VHR +
Sbjct: 562 PIRRYPDLLVHRMI 575
>gi|419707448|ref|ZP_14234932.1| Putative exoribonuclease [Streptococcus salivarius PS4]
gi|383282794|gb|EIC80774.1| Putative exoribonuclease [Streptococcus salivarius PS4]
Length = 817
Score = 229 bits (584), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 155/440 (35%), Positives = 230/440 (52%), Gaps = 35/440 (7%)
Query: 421 PDSIKKRLEEGDATIEMELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAILYEN 479
P IKK D T E++ I+++ N + V + G G+ + +L E+
Sbjct: 167 PIYIKKEPVALDGT---EIIKVDIEKYPNRHYDYFVGSVRDIIGHQGDTGIDVLEVL-ES 222
Query: 480 AICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSD 539
S F + ++ VP QE+L+ R DLR FTID + A DLDDA+ I+RL +
Sbjct: 223 MDIVSEFPEDVMAEAEAVPDAPSQEDLVGRVDLRQEVTFTIDGADAKDLDDAVHIKRLPN 282
Query: 540 GISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDR 599
G +GVHIADVSY+V G+AL+ EA R TSVY+ R +PMLP LS + SLNP VDR
Sbjct: 283 GNFELGVHIADVSYYVTEGSALNREAVARGTSVYVTDRVVPMLPERLSNGICSLNPNVDR 342
Query: 600 LAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLY 659
L S ++ G VV+ I ++VI + +++Y D++ G P+
Sbjct: 343 LTQSAIMEITPKGKVVNHKICQSVINTTFRMTYSDVNDMLAGN-------------PEKI 389
Query: 660 GQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDL 719
QF+ ++ S+ ++ E+ KIL+D R GAL + S+ L +E G P D V+ R
Sbjct: 390 EQFKP--IMDSVSAMAELHKILEDMRERRGALNFDTSEARILVNEKGMPVDIVVRERGTA 447
Query: 720 NFLFEEFMLLANKTAAEVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSS 778
+ E FML AN+ AE A+A P + R H P KL+ F + S G+Q+ +++
Sbjct: 448 ERMIESFMLAANECVAEHFAKAKLP--FIYRIHEEPKAEKLQRFMDYASIFGVQIKGTAN 505
Query: 779 GQFHQSLEQ--AREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPV 836
L++ AR + K + ++++ R MQ A Y + + GHY LA
Sbjct: 506 KMDQLDLQEFMARVQGKPGAEVMNMML---LRSMQQARY-------SEHNHGHYGLAAQY 555
Query: 837 YTHFTSPLRRYPDLVVHRTL 856
YTHFTSP+RRYPDL+VHR +
Sbjct: 556 YTHFTSPIRRYPDLLVHRMI 575
>gi|55822595|ref|YP_141036.1| exoribonuclease R [Streptococcus thermophilus CNRZ1066]
gi|55738580|gb|AAV62221.1| exoribonuclease R [Streptococcus thermophilus CNRZ1066]
Length = 817
Score = 229 bits (583), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 151/434 (34%), Positives = 231/434 (53%), Gaps = 33/434 (7%)
Query: 428 LEEGDATIE-MELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSG 485
+++G +E E++ I+++ N + V + G G+ + +L E+ S
Sbjct: 170 IKKGPVALEGTEIIKVDIEKYPNRHHDYFVGSVRDIIGHQGDAGIDVLEVL-ESMDIVSE 228
Query: 486 FSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVG 545
F + ++ VP QE+L+ R DLR FTID + A DLDDA+ I+RL +G +G
Sbjct: 229 FPEDVMAEAEAVPDAPSQEDLIGRVDLRQEVTFTIDGADAKDLDDAVHIKRLPNGNYELG 288
Query: 546 VHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIF 605
VHIADVSY+V G+AL+ EA R TSVY+ R +PMLP LS + SLNP VDRL S
Sbjct: 289 VHIADVSYYVTEGSALNREAAARGTSVYVTDRVVPMLPERLSNGICSLNPNVDRLTLSAI 348
Query: 606 WDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWS 665
++ G V++ I ++VI++ +++Y DV N + G P+ QF+
Sbjct: 349 MEITPKGKVINHKICQSVIKTTFRMTYS----------DV---NEMLAGNPEKIEQFKP- 394
Query: 666 DVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEE 725
++ S+ ++ E+ KIL+D R GAL + S+ L ++ G P D V+ R + E
Sbjct: 395 -IMDSVSAMAELHKILEDMRERRGALNFDTSEARILVNDKGMPVDIVVRERGTAERMIES 453
Query: 726 FMLLANKTAAEVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQS 784
FML AN+ AE A+A P + R H P KL+ F + S G+Q+ +++
Sbjct: 454 FMLAANECVAEHFAKAKLP--FIYRIHEEPKAEKLQRFMDYASIFGIQIKGTANKMDQLD 511
Query: 785 LE--QAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTS 842
L+ AR + K + ++++ R MQ A Y + + GHY LA YTHFTS
Sbjct: 512 LQDFMARVQGKPGAEVMNMML---LRSMQQARY-------SEHNHGHYGLAAQYYTHFTS 561
Query: 843 PLRRYPDLVVHRTL 856
P+RRYPDL+VHR +
Sbjct: 562 PIRRYPDLLVHRMI 575
>gi|55820704|ref|YP_139146.1| exoribonuclease R [Streptococcus thermophilus LMG 18311]
gi|386086316|ref|YP_006002190.1| Exoribonuclease R [Streptococcus thermophilus ND03]
gi|387909409|ref|YP_006339715.1| exoribonuclease R [Streptococcus thermophilus MN-ZLW-002]
gi|55736689|gb|AAV60331.1| exoribonuclease R [Streptococcus thermophilus LMG 18311]
gi|312278029|gb|ADQ62686.1| Exoribonuclease R [Streptococcus thermophilus ND03]
gi|387574344|gb|AFJ83050.1| exoribonuclease R [Streptococcus thermophilus MN-ZLW-002]
Length = 817
Score = 229 bits (583), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 151/434 (34%), Positives = 231/434 (53%), Gaps = 33/434 (7%)
Query: 428 LEEGDATIE-MELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSG 485
+++G +E E++ I+++ N + V + G G+ + +L E+ S
Sbjct: 170 IKKGPVALEGTEIIKVDIEKYPNRHHDYFVGSVRDIIGHQGDAGIDVLEVL-ESMDIVSE 228
Query: 486 FSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVG 545
F + ++ VP QE+L+ R DLR FTID + A DLDDA+ I+RL +G +G
Sbjct: 229 FPEDVMAEAEAVPDAPSQEDLIGRVDLRQEVTFTIDGADAKDLDDAVHIKRLPNGNYELG 288
Query: 546 VHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIF 605
VHIADVSY+V G+AL+ EA R TSVY+ R +PMLP LS + SLNP VDRL S
Sbjct: 289 VHIADVSYYVTEGSALNREAAARGTSVYVTDRVVPMLPERLSNGICSLNPNVDRLTLSAI 348
Query: 606 WDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWS 665
++ G V++ I ++VI++ +++Y DV N + G P+ QF+
Sbjct: 349 MEITPKGKVINHKICQSVIKTTFRMTYS----------DV---NEMLAGNPEKIEQFKP- 394
Query: 666 DVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEE 725
++ S+ ++ E+ KIL+D R GAL + S+ L ++ G P D V+ R + E
Sbjct: 395 -IMDSVSAMAELHKILEDMRERRGALNFDTSEARILVNDKGMPVDIVVRERGTAERMIES 453
Query: 726 FMLLANKTAAEVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQS 784
FML AN+ AE A+A P + R H P KL+ F + S G+Q+ +++
Sbjct: 454 FMLAANECVAEHFAKAKLP--FIYRIHEEPKAEKLQRFMDYASIFGIQIKGTANKMDQLD 511
Query: 785 LE--QAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTS 842
L+ AR + K + ++++ R MQ A Y + + GHY LA YTHFTS
Sbjct: 512 LQDFMARVQGKPGAEVMNMML---LRSMQQARY-------SEHNHGHYGLAAQYYTHFTS 561
Query: 843 PLRRYPDLVVHRTL 856
P+RRYPDL+VHR +
Sbjct: 562 PIRRYPDLLVHRMI 575
>gi|159131262|gb|EDP56375.1| cell wall biogenesis protein phosphatase Ssd1, putative [Aspergillus
fumigatus A1163]
Length = 1378
Score = 229 bits (583), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 163/527 (30%), Positives = 257/527 (48%), Gaps = 47/527 (8%)
Query: 351 GRVVSIIERSPRR--DGIVGFLN-VNQWFNYKGGSRKDAKKNRSSLSVPDRE-----YIQ 402
G +V++IER + G +G L +Q K + + A++ S+ DR+ +
Sbjct: 594 GHIVAVIERIAGQMFSGTLGLLRPSSQATKEKQEAERQAREGGSARQQHDRQQEKPKIVW 653
Query: 403 LTPTHPKYPKMVVLVKDLP-DSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHV 461
PT + P + + + P D ++K E + + A I W S P ++
Sbjct: 654 FKPTDKRVPLIAIPTEQAPRDFVEKHQEYAN-----RIFVACIKRWPITSLHPFGTLVEQ 708
Query: 462 FGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEE---LLSRKDLRNFCIF 518
G G+++ + +A+L +N FS L + W V E L SR+D R+ F
Sbjct: 709 LGEMGDLKVETDALLRDNNFGADEFSDAVLKSIGWEDWSVSSEGDALLESRRDFRSETTF 768
Query: 519 TIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRK 578
TIDPS A +LD+A I+ L+DG +G+H++D+++FV + +D EA+ R T+VY++ R
Sbjct: 769 TIDPSGAIELDNAYHIKPLADGKVEIGIHVSDIAHFVKANSLVDREAKKRGTAVYLMDRL 828
Query: 579 IPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR--WIGRTVIRSCCKLSYEHAQ 636
+ MLP +S E+ SL P DRL S+ + N VD WIG+++I+S +LSY+
Sbjct: 829 VNMLPRRVSTELCSLLPEQDRLTVSVVFTANPETGAVDDDVWIGKSIIKSAGRLSYDEVN 888
Query: 637 DIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENS 696
+I G+ +V + I++L +++ ++ RF + R+ N
Sbjct: 889 SVIKGETNVSVAGI----------------SANIIQTLNTITRKFREARFGN---RVSNP 929
Query: 697 KPVFL---FDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPA 753
P+ L D+ P + + D L EE AN A + A PD A LRR P+
Sbjct: 930 PPLRLLYQLDDENVPVERNIFDSTDARELVEELRHKANFFVARKLVSAMPDKAFLRRQPS 989
Query: 754 PNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLA 813
PN R+L F ++ G D SSSG SL K++DD L + + MQ A
Sbjct: 990 PNSRRLHSFIDRMNRLGYDFDPSSSGTLQSSL----CKVQDDD-LRKGMETVLLKAMQRA 1044
Query: 814 SYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
Y+ + +D+ HY L PVYTHFT+P RRY D++VHR L A L
Sbjct: 1045 KYYVASTVQDEQRH-HYTLNLPVYTHFTNPSRRYADIIVHRQLEAVL 1090
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R +F P+ + L G + RVN NR +AY + D+ I G +NRA
Sbjct: 426 RKTLFTPYLPQANLPALLSNGQLVAGILRVNKKNRSDAYVTTPDLDADIFICGSKDRNRA 485
Query: 216 VEGDFVLIK-VDRLSLWAK 233
+EGDFV ++ +D +W++
Sbjct: 486 LEGDFVAVELLDVDEVWSQ 504
>gi|403068103|ref|ZP_10909435.1| ribonulease R [Oceanobacillus sp. Ndiop]
Length = 736
Score = 229 bits (583), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 158/514 (30%), Positives = 254/514 (49%), Gaps = 62/514 (12%)
Query: 348 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 407
RP G+V+ I+ER+ + +VG N+ F + K +P+ +I H
Sbjct: 120 RPEGKVIRILERAVIQ--VVGTFEDNRSFGFVIADDK---------RIPNDIFIPKGAAH 168
Query: 408 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 467
+ V AR+ ++ E + ++H+ G +
Sbjct: 169 -------------------------GAVSGHKVIARLTKYPEGRKSAEGEIIHILGHKND 203
Query: 468 VEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATD 527
I +I+Y++ I F + L V + +EEL R+D+R+ + TID + A D
Sbjct: 204 PGIDILSIIYKHGITID-FPEDVLQQATSVSETIAEEELQGRRDIRDEVVVTIDGADAKD 262
Query: 528 LDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLS 587
LDDA+++++L +G ++GV+IADVSY+V G+ +D EA R TSVY++ R IPM+P LS
Sbjct: 263 LDDAVTVKKLDNGNYKLGVYIADVSYYVEEGSPIDNEAFERGTSVYLVDRVIPMIPHRLS 322
Query: 588 EEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVES 647
+ SLNP VDRL ++N AG VV+ I ++VI++ +++Y I+ V+
Sbjct: 323 NGICSLNPKVDRLTLGCEMEINPAGQVVNHEIFQSVIKTTERMTYSDVNKIL-----VDK 377
Query: 648 SNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGT 707
+ E + L FE + ++++IL++KRF GA+ + + L D+ G
Sbjct: 378 DEEVLEKYKALVPMFE---------QMEKLAEILRNKRFGRGAIDFDFKEAKVLVDDTGK 428
Query: 708 PYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRR-HPAPNMRKLREFEAFC 766
P D V+ R L EEFML AN+T AE + D + R H P+ KL +F F
Sbjct: 429 PTDVVVRERGVAERLIEEFMLAANETVAEHF--HWMDVPFIHRIHEDPDEGKLEKFFDFL 486
Query: 767 SKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTD 826
+ G+ + +++ Q+L++ E +K + I+ R M+ A Y G
Sbjct: 487 AGLGISVKGTANEVHPQALQKVLESIKGEPEEM-IVSKLMLRSMKQAKYDPQG------- 538
Query: 827 WGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
GH+ LA YTHFTSP+RRYPDL+VHR + L
Sbjct: 539 IGHFGLATEFYTHFTSPIRRYPDLIVHRLIRTYL 572
>gi|386344317|ref|YP_006040481.1| exoribonuclease R [Streptococcus thermophilus JIM 8232]
gi|339277778|emb|CCC19526.1| exoribonuclease R [Streptococcus thermophilus JIM 8232]
Length = 817
Score = 229 bits (583), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 151/434 (34%), Positives = 231/434 (53%), Gaps = 33/434 (7%)
Query: 428 LEEGDATIE-MELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSG 485
+++G +E E++ I+++ N + V + G G+ + +L E+ S
Sbjct: 170 IKKGPVALEGTEIIKVDIEKYPNRHHDYFVGSVRDIIGHQGDAGIDVLEVL-ESMDIVSE 228
Query: 486 FSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVG 545
F + ++ VP QE+L+ R DLR FTID + A DLDDA+ I+RL +G +G
Sbjct: 229 FPEDVMAEAEAVPDAPSQEDLIGRVDLRQEVTFTIDGADAKDLDDAVHIKRLPNGNYELG 288
Query: 546 VHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIF 605
VHIADVSY+V G+AL+ EA R TSVY+ R +PMLP LS + SLNP VDRL S
Sbjct: 289 VHIADVSYYVTEGSALNREAAARGTSVYVTDRVVPMLPERLSNGICSLNPNVDRLTLSAI 348
Query: 606 WDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWS 665
++ G V++ I ++VI++ +++Y DV N + G P+ QF+
Sbjct: 349 MEITPKGKVINHKICQSVIKTTFRMTYS----------DV---NEMLAGNPEKIEQFKP- 394
Query: 666 DVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEE 725
++ S+ ++ E+ KIL+D R GAL + S+ L ++ G P D V+ R + E
Sbjct: 395 -IMDSVSAMAELHKILEDMRERRGALNFDTSEARILVNDKGMPVDIVVRERGTAERMIES 453
Query: 726 FMLLANKTAAEVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQS 784
FML AN+ AE A+A P + R H P KL+ F + S G+Q+ +++
Sbjct: 454 FMLAANECVAEHFAKAKLP--FIYRIHEEPKAEKLQRFMDYASIFGIQIKGTANKMDQLD 511
Query: 785 LE--QAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTS 842
L+ AR + K + ++++ R MQ A Y + + GHY LA YTHFTS
Sbjct: 512 LQDFMARVQGKPGAEVMNMML---LRSMQQARY-------SEHNHGHYGLAAQYYTHFTS 561
Query: 843 PLRRYPDLVVHRTL 856
P+RRYPDL+VHR +
Sbjct: 562 PIRRYPDLLVHRMI 575
>gi|70995504|ref|XP_752507.1| cell wall biogenesis protein phosphatase Ssd1 [Aspergillus fumigatus
Af293]
gi|66850142|gb|EAL90469.1| cell wall biogenesis protein phosphatase Ssd1, putative [Aspergillus
fumigatus Af293]
Length = 1378
Score = 229 bits (583), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 163/527 (30%), Positives = 257/527 (48%), Gaps = 47/527 (8%)
Query: 351 GRVVSIIERSPRR--DGIVGFLN-VNQWFNYKGGSRKDAKKNRSSLSVPDRE-----YIQ 402
G +V++IER + G +G L +Q K + + A++ S+ DR+ +
Sbjct: 594 GHIVAVIERIAGQMFSGTLGLLRPSSQATKEKQEAERQAREGGSARQQHDRQQEKPKIVW 653
Query: 403 LTPTHPKYPKMVVLVKDLP-DSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHV 461
PT + P + + + P D ++K E + + A I W S P ++
Sbjct: 654 FKPTDKRVPLIAIPTEQAPRDFVEKHQEYAN-----RIFVACIKRWPITSLHPFGTLVEQ 708
Query: 462 FGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEE---LLSRKDLRNFCIF 518
G G+++ + +A+L +N FS L + W V E L SR+D R+ F
Sbjct: 709 LGEMGDLKVETDALLRDNNFGADEFSDAVLKSIGWEDWSVSSEGDALLESRRDFRSETTF 768
Query: 519 TIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRK 578
TIDPS A +LD+A I+ L+DG +G+H++D+++FV + +D EA+ R T+VY++ R
Sbjct: 769 TIDPSGAIELDNAYHIKPLADGKVEIGIHVSDIAHFVKANSLVDREAKKRGTAVYLMDRL 828
Query: 579 IPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR--WIGRTVIRSCCKLSYEHAQ 636
+ MLP +S E+ SL P DRL S+ + N VD WIG+++I+S +LSY+
Sbjct: 829 VNMLPRRVSTELCSLLPEQDRLTVSVVFTANPETGAVDDDVWIGKSIIKSAGRLSYDEVN 888
Query: 637 DIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENS 696
+I G+ +V + I++L +++ ++ RF + R+ N
Sbjct: 889 SVIKGETNVSVAGI----------------SANIIQTLNTITRKFREARFGN---RVSNP 929
Query: 697 KPVFL---FDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPA 753
P+ L D+ P + + D L EE AN A + A PD A LRR P+
Sbjct: 930 PPLRLLYQLDDENVPVERNIFDSTDARELVEELRHKANFFVARKLVSAMPDKAFLRRQPS 989
Query: 754 PNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLA 813
PN R+L F ++ G D SSSG SL K++DD L + + MQ A
Sbjct: 990 PNSRRLHSFIDRMNRLGYDFDPSSSGTLQSSL----CKVQDDD-LRKGMETVLLKAMQRA 1044
Query: 814 SYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 860
Y+ + +D+ HY L PVYTHFT+P RRY D++VHR L A L
Sbjct: 1045 KYYVASTVQDEQRH-HYTLNLPVYTHFTNPSRRYADIIVHRQLEAVL 1090
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 156 RCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHNRLEAYCKIEGVQTDVLITGIAAQNRA 215
R +F P+ + L G + RVN NR +AY + D+ I G +NRA
Sbjct: 426 RKTLFTPYLPQANLPALLSNGQLVAGILRVNKKNRSDAYVTTPDLDADIFICGSKDRNRA 485
Query: 216 VEGDFVLIK-VDRLSLWAK 233
+EGDFV ++ +D +W++
Sbjct: 486 LEGDFVAVELLDVDEVWSQ 504
>gi|345323880|ref|XP_001511394.2| PREDICTED: DIS3-like exonuclease 1 [Ornithorhynchus anatinus]
Length = 1133
Score = 228 bits (582), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 153/433 (35%), Positives = 226/433 (52%), Gaps = 51/433 (11%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC--- 496
V R+D W S +P H + V GR G++E +I IL EN+I S F L +P
Sbjct: 369 VVVRVDSWESTSVYPNGHFVRVLGRIGDLEGEIATILVENSISVSPFPEAQLGEMPVDTP 428
Query: 497 -VPWEVPQEELLSRKDLR-NFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYF 554
PW V EE R DLR +F+IDP D+DDALS+ L +G +GVHIADVS+F
Sbjct: 429 EKPWRVSPEEERVRADLRKTHLVFSIDPKDCEDVDDALSVRTLENGNLELGVHIADVSHF 488
Query: 555 VLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDV 614
V P + D+EA+ R+T+ Y+ R+ MLP +LS + SL GVDR A S+ W+L+ A
Sbjct: 489 VPPNSYTDMEAKTRATTYYLADRRYDMLPSILSSNLCSLLGGVDRYAVSVTWELDRASYE 548
Query: 615 VDR-WIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYG------QFEWSDV 667
+ R GRT++RS KLSYE AQ ++DG + + P+L G Q ++
Sbjct: 549 IQRVRFGRTIVRSAYKLSYETAQTLLDG-------DPAADAVPELRGLDEEMRQRRLEEL 601
Query: 668 VRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFM 727
R++++L +V++ + +R GAL LE + D D + +++ E M
Sbjct: 602 GRAVRTLTDVARRARARRAGRGALELEGVEVRVQLDRDSNIRDLIPKQPLEVHETVAECM 661
Query: 728 LLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQ 787
+LAN A+ I + FP AL S+ SL++
Sbjct: 662 ILANHWVAKKIWKTFPHQAL-----------------------------SNKTLADSLDK 692
Query: 788 AREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRY 847
A + +D ++ +L + AT+ M A YF +G + ++ ++ HY LA YTHFTSP+RRY
Sbjct: 693 AEDP--EDPLVNRMLRSMATQAMSNALYFSTGSYSEE-EFHHYGLALDKYTHFTSPIRRY 749
Query: 848 PDLVVHRTLNAAL 860
D+VVHR L AA+
Sbjct: 750 SDIVVHRLLMAAI 762
Score = 43.9 bits (102), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 69/145 (47%), Gaps = 17/145 (11%)
Query: 94 MPTMHINEEESA--ESGSTQSQLLLAT--DLCGSIISRSCPEPIANDSSCWA-YTNKDDN 148
MP + + E+E A + GS + + + D GS P+ A C + ++ +
Sbjct: 187 MPVVMVTEDEEAIQQYGSETEGVFVISFKDYLGSF----WPDLKAAHELCDSILQSRHER 242
Query: 149 PSHQSEARCKIFAPHWSMEAVNEALEKGDAFKALYRVNAHN-RLEAYCKIEGVQ------ 201
S E K + H +E + ++ G + + VN H ++EA+ +++G
Sbjct: 243 ESESLENHGKEYPEHLPLEVLEAGIKSGRYVQGVLNVNKHRAQIEAFVRLQGTSGKESDL 302
Query: 202 -TDVLITGIAAQNRAVEGDFVLIKV 225
+D+L+ G A+NR++ GD V++++
Sbjct: 303 LSDILVHGTKARNRSLHGDVVVVEL 327
>gi|449329650|gb|AGE95920.1| dis3 rnase II family protein [Encephalitozoon cuniculi]
Length = 835
Score = 228 bits (582), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 169/542 (31%), Positives = 251/542 (46%), Gaps = 73/542 (13%)
Query: 401 IQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLH 460
+ + P + P + + + + KRL ID W S +P H
Sbjct: 287 VLVIPIDRRIPAIRIRTSQAEELMNKRL------------CVEIDGWERTSNYPSGHYYR 334
Query: 461 VFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW--------EVPQEELL--SRK 510
G G+ ++ A+L N I + ++ + + VPW E E+ +R+
Sbjct: 335 RLGTLGDRNAEMEAVLVANGIT---YYNKNWAEILRVPWMNEDIFGIEKAYNEVREGTRE 391
Query: 511 DLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRST 570
D R + +IDP D+DDAL L +G VGVHIADV+Y+V G+ +D A R T
Sbjct: 392 DFRELSVVSIDPPDCEDIDDALHCRLLPNGNWEVGVHIADVTYYVTKGSEIDKIAADRGT 451
Query: 571 SVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKL 630
++Y+ + +I MLP LS ++ SL G DR AFS+ W+++S VV R++IRS
Sbjct: 452 TIYLPEWRIDMLPPALSTDLCSLVAGKDRAAFSVVWEMSSDVRVVRTHFCRSLIRSKRSF 511
Query: 631 SYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGA 690
SY A D + G D +V RS++ L E+S++L+ +RF G+
Sbjct: 512 SYNEAYDAVQGLVDA------------------GDEVSRSLRMLLEISRVLRSRRFAKGS 553
Query: 691 LRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRR 750
L L + +F E G NFL EEFM+LAN + A I PDS+LLR+
Sbjct: 554 LDLSTRQ--LVFREGGFEMKEYFP----TNFLVEEFMVLANISVASFIYHHHPDSSLLRK 607
Query: 751 HPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPM 810
HP P++ + GL +DTSS +SLE K + V D+ R M
Sbjct: 608 HPPPSVLDI----------GLDIDTSSPRALSESLE------KMEGVRKDLAKRMLIRSM 651
Query: 811 QLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE--KLYWK 868
A Y SG + HY LA P+YTHFTSP+RRY D++VHR LN L+ K
Sbjct: 652 NQAVYVVSG---ETPSLHHYGLATPIYTHFTSPIRRYADIIVHRILNHILQTAPTKEAQI 708
Query: 869 HRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHC 928
++ + R+ G + +F D+D ++ R AA K + C + V +A
Sbjct: 709 NKLGIVTFRARKRTDGESMEEVFVDEDMCRNMNSRHR---AARKAALECDKLTVYMALRN 765
Query: 929 ND 930
D
Sbjct: 766 ED 767
>gi|401681512|ref|ZP_10813412.1| ribonuclease R [Streptococcus sp. AS14]
gi|400186282|gb|EJO20495.1| ribonuclease R [Streptococcus sp. AS14]
Length = 782
Score = 228 bits (582), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 154/444 (34%), Positives = 241/444 (54%), Gaps = 36/444 (8%)
Query: 438 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAI-LYENAICCSGFSPESLSCLP 495
E++ ID++ ++ F A ++ V G + P I+ + + E+ S F + L
Sbjct: 180 EVLKVAIDKYPTKKHDFFVASLVDVVGHVND--PGIDVLEVLESMDIVSEFPEKVLEEAE 237
Query: 496 CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFV 555
VP + +L R DLR IFTID + A DLDDA+ I+RL +G +GVHIADVS +V
Sbjct: 238 RVPDAPTESDLEGRLDLREEVIFTIDGADAKDLDDAVHIKRLKNGNFELGVHIADVSNYV 297
Query: 556 LPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV 615
G+ LD EA R+TSVY+ R +PMLP LS + SLNP VDRL S ++++ G VV
Sbjct: 298 KEGSELDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPNVDRLTQSAIMEIDAKGRVV 357
Query: 616 DRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 675
I +TVI++ +++Y DII G + E + ++ +V SI S+
Sbjct: 358 KHIITQTVIKTTFRMTYSDVNDIIAG--NQEKAE-------------QFKAIVPSIDSMV 402
Query: 676 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 735
++ +IL+ RF GAL + ++ + ++ G P D VL R + E FML+AN+T A
Sbjct: 403 QLHEILESMRFKRGALNFDTNEAKIMVNKEGRPVDIVLRQRGIAERMIESFMLVANETVA 462
Query: 736 EVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 794
E A+ P + R H P K+++F + S G+++ ++S Q+L+ E +KD
Sbjct: 463 EHFAKLNLP--FIYRIHEEPKAEKVQKFIDYASSFGIRIYGTASSMSQQALQDIMEAVKD 520
Query: 795 ---DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 851
+ VL +L+ R MQ A Y + + GHY LA YTHFTSP+RRYPDL+
Sbjct: 521 QPYEEVLSMMLL----RSMQQARY-------SEHNHGHYGLAAEFYTHFTSPIRRYPDLL 569
Query: 852 VHRTLNAALEAEKLYWKHRRMLPK 875
VHR + +++++ +++P+
Sbjct: 570 VHRMVQDYGKSKEIAEHFEQVIPE 593
>gi|421452013|ref|ZP_15901374.1| Exoribonuclease II [Streptococcus salivarius K12]
gi|400182444|gb|EJO16706.1| Exoribonuclease II [Streptococcus salivarius K12]
Length = 817
Score = 228 bits (582), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 155/440 (35%), Positives = 230/440 (52%), Gaps = 35/440 (7%)
Query: 421 PDSIKKRLEEGDATIEMELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAILYEN 479
P IKK D T E++ I+++ N + V + G G+ + +L E+
Sbjct: 167 PIYIKKEPVALDGT---EIIKVDIEKYPNRHYDYFVGSVRDIIGHQGDAGIDVLEVL-ES 222
Query: 480 AICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSD 539
S F + ++ VP QE+LL R DLR FTID + A DLDDA+ I+RL +
Sbjct: 223 MDIVSEFPEDVMAEAEAVPDAPSQEDLLGRVDLRQEVTFTIDGADAKDLDDAVHIKRLPN 282
Query: 540 GISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDR 599
G +GVHIADVSY+V G+AL+ EA R TSVY+ R +PMLP LS + SLNP VDR
Sbjct: 283 GNFELGVHIADVSYYVTEGSALNREAVARGTSVYVTDRVVPMLPERLSNGICSLNPNVDR 342
Query: 600 LAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLY 659
L S ++ G VV+ I ++VI + +++Y +++ G P+
Sbjct: 343 LTQSAIMEITPKGKVVNHKICQSVINTTFRMTYSDVNEMLAGN-------------PEKI 389
Query: 660 GQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDL 719
QF+ ++ S+ ++ E+ KIL+D R GAL + S+ L +E G P D V+ R
Sbjct: 390 EQFKP--IMDSVSAMAELHKILEDMRERRGALNFDTSEARILVNEKGMPVDIVVRERGTA 447
Query: 720 NFLFEEFMLLANKTAAEVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSS 778
+ E FML AN+ AE A+A P + R H P KL+ F + S G+Q+ +++
Sbjct: 448 ERMIESFMLAANECVAEHFAKAKLP--FIYRIHEEPKAEKLQRFMDYASIFGVQIKGTAN 505
Query: 779 GQFHQSLEQ--AREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPV 836
L++ AR + K + ++++ R MQ A Y + + GHY LA
Sbjct: 506 KMDQLDLQEFMARVQGKPGAEVMNMML---LRSMQQARY-------SEHNHGHYGLAAQY 555
Query: 837 YTHFTSPLRRYPDLVVHRTL 856
YTHFTSP+RRYPDL+VHR +
Sbjct: 556 YTHFTSPIRRYPDLLVHRMI 575
>gi|422820841|ref|ZP_16869034.1| ribonuclease R [Streptococcus sanguinis SK353]
gi|324991459|gb|EGC23392.1| ribonuclease R [Streptococcus sanguinis SK353]
Length = 782
Score = 228 bits (582), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 152/441 (34%), Positives = 235/441 (53%), Gaps = 30/441 (6%)
Query: 438 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAI-LYENAICCSGFSPESLSCLP 495
E++ ID++ ++ F A ++ V G + P I+ + + E+ S F + L
Sbjct: 180 EVLKVAIDKYPTKKHDFFVASLVDVVGHVND--PGIDVLEVLESMDIVSEFPEKVLEEAE 237
Query: 496 CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFV 555
VP + +L R DLR FTID + A DLDDA+ I+RL +G +GVHIADVSY+V
Sbjct: 238 RVPDAPTESDLAGRLDLREEITFTIDGADAKDLDDAVHIKRLKNGNFELGVHIADVSYYV 297
Query: 556 LPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV 615
G+ LD EA R+TSVY+ R +PMLP LS + SLNP VDRL S ++++ G VV
Sbjct: 298 KEGSELDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPNVDRLTQSAIMEIDAKGRVV 357
Query: 616 DRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 675
I +TVI++ +++Y DII G + E + ++ +V SI S+
Sbjct: 358 KHAITQTVIKTTFRMTYSDVNDIIAG--NQEKAE-------------QFKAIVPSIDSMV 402
Query: 676 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 735
+ +IL+ RF GAL + ++ + ++ G P D VL R + E FML AN+T A
Sbjct: 403 RLHEILESMRFKRGALNFDTNEAKIMVNKEGRPVDIVLRQRGIAERMIESFMLAANETVA 462
Query: 736 EVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 794
E + P + R H P K+++F + S G+++ ++S Q+L+ E +KD
Sbjct: 463 EHFTKLNLP--FIYRIHEEPKAEKVQKFIDYASSFGVRIYGTASSMSQQALQDIMEAVKD 520
Query: 795 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 854
D+L R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 Q-PYEDVLSMMLLRSMQQARY-------SEHNHGHYGLAAEFYTHFTSPIRRYPDLLVHR 572
Query: 855 TLNAALEAEKLYWKHRRMLPK 875
+ +++++ +++P+
Sbjct: 573 MVRDYGKSKEIAEHFEQVIPE 593
>gi|418018209|ref|ZP_12657765.1| exoribonuclease R [Streptococcus salivarius M18]
gi|345527058|gb|EGX30369.1| exoribonuclease R [Streptococcus salivarius M18]
Length = 817
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 154/440 (35%), Positives = 230/440 (52%), Gaps = 35/440 (7%)
Query: 421 PDSIKKRLEEGDATIEMELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAILYEN 479
P IKK D T E++ I+++ N + V + G G+ + +L E+
Sbjct: 167 PIYIKKEPVALDGT---EIIKVDIEKYPNRHYDYFVGSVRDIIGHQGDAGIDVLEVL-ES 222
Query: 480 AICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSD 539
S F + ++ VP QE+LL R DLR FTID + A DLDDA+ I+RL +
Sbjct: 223 MDIVSEFPEDVMAEAEAVPDAPSQEDLLGRVDLRQEVTFTIDGADAKDLDDAVHIKRLPN 282
Query: 540 GISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDR 599
G +GVHIADVSY+V G+AL+ EA R TSVY+ R +PMLP LS + SLNP VDR
Sbjct: 283 GNFELGVHIADVSYYVTEGSALNREAVARGTSVYVTDRVVPMLPERLSNGICSLNPNVDR 342
Query: 600 LAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLY 659
L S ++ G VV+ I ++VI + +++Y +++ G P+
Sbjct: 343 LTQSAIMEITPKGKVVNHKICQSVINTTFRMTYSDVNEMLAGN-------------PEKI 389
Query: 660 GQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDL 719
QF+ ++ S+ ++ E+ KIL+D R GAL + S+ L +E G P D V+ R
Sbjct: 390 EQFKP--IMESVSAMAELHKILEDMRERRGALNFDTSEARILVNEKGMPVDIVVRERGTA 447
Query: 720 NFLFEEFMLLANKTAAEVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSS 778
+ E FML AN+ AE A+A P + R H P KL+ F + S G+Q+ +++
Sbjct: 448 ERMIESFMLAANECVAEHFAKAKLP--FIYRIHEEPKAEKLQRFMDYASIFGVQIKGTAN 505
Query: 779 GQFHQSLEQ--AREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPV 836
L++ A+ + K + ++++ R MQ A Y + + GHY LA
Sbjct: 506 KMDQLDLQEFMAKVQGKPGAEVMNMML---LRSMQQARY-------SEHNHGHYGLAAQY 555
Query: 837 YTHFTSPLRRYPDLVVHRTL 856
YTHFTSP+RRYPDL+VHR +
Sbjct: 556 YTHFTSPIRRYPDLLVHRMI 575
>gi|418977627|ref|ZP_13525441.1| ribonuclease R [Streptococcus mitis SK575]
gi|383349595|gb|EID27524.1| ribonuclease R [Streptococcus mitis SK575]
Length = 784
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 167/526 (31%), Positives = 264/526 (50%), Gaps = 48/526 (9%)
Query: 438 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC 496
E++ ID++ +++ F A VL V G +V + +L E+ S F +
Sbjct: 179 EVLKVFIDKYPSKKHDFFVASVLDVVGHSTDVGIDVLEVL-ESMDIVSEFPEAVVKEAES 237
Query: 497 VPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVL 556
VP Q+++ R DLR+ FTID + A DLDDA+ I+ L +G +GVHIADVSY+V
Sbjct: 238 VPDAPSQKDMEGRLDLRDEITFTIDGADAKDLDDAVHIKALKNGNLELGVHIADVSYYVT 297
Query: 557 PGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD 616
G+ALD EA R+TSVY+ R +PMLP LS + SLNP VDRL S +++ G VV+
Sbjct: 298 EGSALDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPQVDRLTQSAIMEIDKHGRVVN 357
Query: 617 RWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 676
I +TVI++ +++Y DI+ G D E E+ +V SI+ + +
Sbjct: 358 YTITQTVIKTSFRMTYSDVNDILAG--DEEKRQ-------------EYKKIVPSIELMAK 402
Query: 677 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 736
+ +IL++ R GAL + ++ L D+ G P D VL R + E FML+AN+T AE
Sbjct: 403 LHEILENMRVKRGALNFDTNEAKILVDKQGKPVDIVLRQRGVAERMIESFMLMANETVAE 462
Query: 737 VIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDD 795
++ P + R H P K+++F + S GL++ ++S ++L+ ++ +
Sbjct: 463 HFSKLDLP--FIYRIHEEPKAEKVQKFIDYASSFGLRIYGTASEISQEALQDIMRAVEGE 520
Query: 796 -YVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 854
Y D+L R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 PYA--DVLSMMLLRSMQQARY-------SEHNHGHYGLAADYYTHFTSPIRRYPDLLVHR 571
Query: 855 TLNAALEAEKLYWKHRRMLPK------NNHREGVRGRFLTGIFYDKDAAESLEGRE--AL 906
+ ++++ +++P+ N R + + E G E A+
Sbjct: 572 MIRDYGRSKEIAEHFEQVIPEIATQSSNRERRAIEAEREVEAMKKAEYMEEYVGEEYDAV 631
Query: 907 SVAALKYGV-----PCADILVNVAT-----HCNDRKLACRNVKDAC 942
+ +K+G+ + L+++ H N+R L R K
Sbjct: 632 VSSIVKFGLFVELPNTVEGLIHITNLPEFYHFNERDLTLRGEKSGT 677
>gi|307706472|ref|ZP_07643281.1| ribonuclease R [Streptococcus mitis SK321]
gi|307618182|gb|EFN97340.1| ribonuclease R [Streptococcus mitis SK321]
Length = 784
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 167/526 (31%), Positives = 263/526 (50%), Gaps = 48/526 (9%)
Query: 438 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC 496
E++ ID++ +++ F A VL V G +V + +L E+ S F +
Sbjct: 179 EVLKVFIDKYPSKKHDFFVASVLDVVGHSTDVGIDVLEVL-ESMDIVSEFPEAVVKEAES 237
Query: 497 VPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVL 556
VP Q+++ R DLR+ FTID + A DLDDA+ I+ L +G +GVHIADVSY+V
Sbjct: 238 VPDAPSQKDMEGRLDLRDEITFTIDGADAKDLDDAVHIKALKNGNLELGVHIADVSYYVT 297
Query: 557 PGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD 616
G+ALD EA R+TSVY+ R +PMLP LS + SLNP VDRL S +++ G VV+
Sbjct: 298 EGSALDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPQVDRLTQSAIMEIDKHGRVVN 357
Query: 617 RWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 676
I +TVI++ +++Y DI+ G D E E+ +V SI+ + +
Sbjct: 358 YTITQTVIKTSFRMTYSDVNDILAG--DKEKRQ-------------EYQKIVPSIELMAK 402
Query: 677 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 736
+ + L++ R GAL + ++ L D+ G P D VL R + E FML+AN+T AE
Sbjct: 403 LHETLENMRVKRGALNFDTNEAKILVDKQGKPVDIVLRQRGIAERMIESFMLMANETVAE 462
Query: 737 VIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDD 795
++ P + R H P K+++F + S GL++ ++S ++L+ +K +
Sbjct: 463 HFSKLDLP--FIYRIHEEPKAEKVQKFIDYASSFGLRIYGTASEISQEALQDIMRAVKGE 520
Query: 796 -YVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 854
Y D+L R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 PYA--DVLSMMLLRSMQQARY-------SEHNHGHYGLAADYYTHFTSPIRRYPDLLVHR 571
Query: 855 TLNAALEAEKLYWKHRRMLPK------NNHREGVRGRFLTGIFYDKDAAESLEGRE--AL 906
+ ++++ +++P+ N R + + E G E A+
Sbjct: 572 MIRDYGSSKEIAEHFEQVIPEIATQSSNRERRAIEAEREVEAMKKAEYMEEYVGEEYDAV 631
Query: 907 SVAALKYGV-----PCADILVNVAT-----HCNDRKLACRNVKDAC 942
+ +K+G+ + L+++ H N+R L R K
Sbjct: 632 VSSIVKFGLFVELPNTVEGLIHITNLPEFYHFNERDLTLRGEKSGT 677
>gi|423070304|ref|ZP_17059080.1| ribonuclease R [Streptococcus intermedius F0413]
gi|355366625|gb|EHG14343.1| ribonuclease R [Streptococcus intermedius F0413]
Length = 779
Score = 228 bits (580), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 167/527 (31%), Positives = 256/527 (48%), Gaps = 48/527 (9%)
Query: 438 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAI-LYENAICCSGFSPESLSCLP 495
E++ ID++ ++ F A +L V G + P I+ + + E+ S F L
Sbjct: 178 EILKVEIDKYPTKKHDFFVATILDVVGHKDD--PGIDVLEVLESMDIVSEFPERVLKEAS 235
Query: 496 CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFV 555
+P +++ R DLRN FTID + A DLDDA+ I++LS+G +GVHIADVSY+V
Sbjct: 236 AIPDMPSKKDFEGRLDLRNEITFTIDGADAKDLDDAVHIKKLSNGHFELGVHIADVSYYV 295
Query: 556 LPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV 615
G+ LD EA R+TSVY+ R +PMLP LS + SLNP VDRL S +++ G VV
Sbjct: 296 QEGSELDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPNVDRLTQSAIMEIDQKGRVV 355
Query: 616 DRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 675
+ +TVI++ +++Y DII G D E + +V SI+ +
Sbjct: 356 KHTVTQTVIKTTFRMTYSDVNDIITG--DKEKRTA-------------FKTIVPSIEQMT 400
Query: 676 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 735
E+ IL+ RF GAL + + L ++ G P D +L R + E FML+AN+T A
Sbjct: 401 ELHAILETMRFKRGALNFDTKEAKILVNKTGRPVDIILRQRGVAERMIESFMLVANETVA 460
Query: 736 EVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 794
E AR P L R H P K+++F + S G+++ ++ QS Q K
Sbjct: 461 EHFARLNLP--FLYRIHEEPKAEKVQKFIDYASTFGVRV-YGTANSISQSALQDIMKAVH 517
Query: 795 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 854
++L R MQ A Y + ++GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 518 GQPYEEVLSMMLLRSMQQARY-------SEHNYGHYGLAAGFYTHFTSPIRRYPDLLVHR 570
Query: 855 TLNAALEAEKLYWKHRRMLP------KNNHREGVRGRFLTGIFYDKDAAESLEGRE--AL 906
+ ++++ +++P + R + + E G E +
Sbjct: 571 MVRDYGRSKEIAEHFEQVIPDIASQSSSRERRAIEAEREVEAMKKAEFMEEFVGEEFDGI 630
Query: 907 SVAALKYGV-----PCADILVNVAT-----HCNDRKLACRNVKDACV 943
+ +K+G+ + L++VA H N+R L + K V
Sbjct: 631 VSSVVKFGLFVELSNTVEGLIHVANLPEFFHYNERNLTLQGEKSGVV 677
>gi|440639435|gb|ELR09354.1| hypothetical protein GMDG_03920 [Geomyces destructans 20631-21]
Length = 1399
Score = 228 bits (580), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 160/532 (30%), Positives = 263/532 (49%), Gaps = 42/532 (7%)
Query: 351 GRVVSIIERSPRR--DGIVGFLN-VNQWFNYKGGSRKDAKKNRSSLSVPDRE-----YIQ 402
G +V++IER + G +G L +Q K + + A+ S R+ +
Sbjct: 614 GHIVAVIERVAGQMFSGTLGLLRPSSQATKEKQEAERQARDGNSGRHHEQRQQDKPKIVW 673
Query: 403 LTPTHPKYPKMVVLVKDLP-DSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHV 461
PT + P + + + P D ++K + D + A I W S P ++ +
Sbjct: 674 FKPTDKRVPLIAIPTEQAPRDFVEKHQDYAD-----RIFVACIKRWPITSLHPFGTLVEM 728
Query: 462 FGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEE---LLSRKDLRNFCIF 518
G+ GE++ + +A+L +N FS + + W + +E+ + SR+D R+ F
Sbjct: 729 LGKMGELKVETDALLRDNNFASDEFSDAVIRSINLDEWSLAKEDEATIASRRDFRDEKAF 788
Query: 519 TIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRK 578
TIDP+ +LDDA+ I+ DG +G+HIADV++F+ + +D EA+ R T+VY++ R
Sbjct: 789 TIDPNGVNELDDAIHIKGEVDGKIEIGIHIADVAHFIKANSLVDREAKKRGTAVYLMNRS 848
Query: 579 IPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV---DRWIGRTVIRSCCKLSYEHA 635
MLP ++ +V SL PG DRL S+ + +N+ V D WIG+++I+S KLSY
Sbjct: 849 CNMLPPKIASDVCSLIPGEDRLTVSVVFKVNTLTGAVADDDIWIGKSIIKSSGKLSYREV 908
Query: 636 QDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLEN 695
++ G+ +V +L G SD + I+ L VS+ ++ R +
Sbjct: 909 DAVLSGQGNV-----------KLDG---ISD--KDIQILQAVSRKFREARLGSEGETIAP 952
Query: 696 SKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPN 755
+ ++ D+ P ++ + + L EE M AN A+ IA+ P+ ALLRR APN
Sbjct: 953 LRLMYQLDDENVPVEANIFNSTPSHELIEELMHKANTYVAQKIAQGLPEKALLRRQGAPN 1012
Query: 756 MRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASY 815
R+LR F + G ++DT+SSG SL + DD + + + + A Y
Sbjct: 1013 PRRLRTFADRMTALGYEIDTTSSGTLQNSLFKV-----DDSEIRKGMETLLVKAIPRAKY 1067
Query: 816 FCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYW 867
F +G + HY L P+YTHFT+P RRY D+VVHR L + L K+ +
Sbjct: 1068 FIAGRTLEHL-HPHYYLNLPLYTHFTNPSRRYADIVVHRQLESVLSEGKIEY 1118
>gi|422848230|ref|ZP_16894906.1| ribonuclease R [Streptococcus sanguinis SK115]
gi|325690762|gb|EGD32763.1| ribonuclease R [Streptococcus sanguinis SK115]
Length = 782
Score = 228 bits (580), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 154/444 (34%), Positives = 240/444 (54%), Gaps = 36/444 (8%)
Query: 438 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAI-LYENAICCSGFSPESLSCLP 495
E++ ID++ ++ F A ++ V G + P I+ + + E+ S F + L
Sbjct: 180 EVLKVAIDKYPTKKHDFFVASLVDVVGHVND--PGIDVLEVLESMDIVSEFPEKVLEEAE 237
Query: 496 CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFV 555
VP + +L R DLR IFTID + A DLDDA+ I+RL +G +GVHIADVS +V
Sbjct: 238 RVPDAPTESDLEGRLDLREEVIFTIDGADAKDLDDAVHIKRLKNGNFELGVHIADVSNYV 297
Query: 556 LPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV 615
G+ LD EA R+TSVY+ R +PMLP LS + SLNP VDRL S ++++ G VV
Sbjct: 298 KEGSELDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPNVDRLTQSAIMEIDAKGRVV 357
Query: 616 DRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 675
I +TVI++ +++Y DII G + E + ++ +V SI S+
Sbjct: 358 KHIITQTVIKTTFRMTYSDVNDIIAG--NQEKAE-------------QFKAIVPSIDSMV 402
Query: 676 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 735
++ +IL+ RF GAL + ++ + ++ G P D VL R + E FML+AN+T A
Sbjct: 403 QLHEILESMRFKRGALNFDTNEAKIMVNKEGRPVDIVLRQRGIAERMIESFMLVANETVA 462
Query: 736 EVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 794
E A+ P + R H P K+++F + S G+++ +S Q+L+ E +KD
Sbjct: 463 EHFAKLNLP--FIYRIHEEPKAEKVQKFIDYASSFGIRIYGMASSMSQQALQDIMEAVKD 520
Query: 795 ---DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 851
+ VL +L+ R MQ A Y + + GHY LA YTHFTSP+RRYPDL+
Sbjct: 521 QPYEEVLSMMLL----RSMQQARY-------SEHNHGHYGLAAEFYTHFTSPIRRYPDLL 569
Query: 852 VHRTLNAALEAEKLYWKHRRMLPK 875
VHR + +++++ +++P+
Sbjct: 570 VHRMVQDYGKSKEIAEHFEQVIPE 593
>gi|212550560|ref|YP_002308877.1| ribonuclease R [Candidatus Azobacteroides pseudotrichonymphae
genomovar. CFP2]
gi|212548798|dbj|BAG83466.1| putative ribonuclease R [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 586
Score = 228 bits (580), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 133/378 (35%), Positives = 206/378 (54%), Gaps = 46/378 (12%)
Query: 497 VPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVL 556
+P + E+ +R+D R FTIDP A D DDALSI++LS+ +GVHIADV++++
Sbjct: 111 IPNHITLTEISNREDFRETLTFTIDPQNAKDFDDALSIKKLSNNFYEIGVHIADVTHYIK 170
Query: 557 PGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD 616
P +++D EA R TS+Y++ + IPMLP L EV SL P D+L FS+ ++++ + +
Sbjct: 171 PDSSIDKEALKRGTSIYLVDKVIPMLPESLCNEVCSLRPNEDKLCFSVIFEMDGKAKIHN 230
Query: 617 RWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 676
I RT+IRS + +YE AQ+II+ F ++N +E + S+ +L
Sbjct: 231 YRIRRTIIRSDHRFTYEEAQEIIERSF---ATN------------YEDCSLNSSVFTLNC 275
Query: 677 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 736
++KIL++KRF++G++ + F D G P D L + N L EEFMLLANKT AE
Sbjct: 276 LAKILREKRFSNGSIDFVQREIQFDLDREGNPLDIYLKKNNEANQLVEEFMLLANKTIAE 335
Query: 737 VIA------RAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLD--------TSSSGQFH 782
++ RA P + R H P++ K++ + G +L+ + +
Sbjct: 336 IVGKVPKNKRAKP--FVYRVHGLPDIEKIKNLKQLVRSFGYKLNIKRINNETSKNISSLF 393
Query: 783 QSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTS 842
+ ++ RE+ +++ A R M+ A Y + GHY LAF YTHFTS
Sbjct: 394 KQVQGTREQ--------NLIETIALRTMEKAIY-------TTENVGHYGLAFKYYTHFTS 438
Query: 843 PLRRYPDLVVHRTLNAAL 860
P+RRYPD++VHR L L
Sbjct: 439 PIRRYPDMIVHRLLEKYL 456
>gi|268316759|ref|YP_003290478.1| ribonuclease R [Rhodothermus marinus DSM 4252]
gi|262334293|gb|ACY48090.1| ribonuclease R [Rhodothermus marinus DSM 4252]
Length = 751
Score = 228 bits (580), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 158/432 (36%), Positives = 219/432 (50%), Gaps = 41/432 (9%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 499
V ID +++ P+ VL V G + Q+ A+ + +GF +L +P
Sbjct: 201 VVVSIDRFDDPKASPEGRVLEVLGPASDPRVQVLALALSKDVR-TGFPEAALKEAERIPD 259
Query: 500 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 559
+P+ E R DLR+ +FTIDPS A D DDAL + RL +G VGVHIADVSY+V PG+
Sbjct: 260 TIPEREYRRRLDLRDRAVFTIDPSDAKDFDDALHLRRLPNGHIEVGVHIADVSYYVRPGS 319
Query: 560 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 619
ALD EA R TSVY++ R IPMLP LS +V SL PG D+L +S+ +L + VV I
Sbjct: 320 ALDEEAYQRGTSVYLVDRVIPMLPEKLSNQVCSLRPGEDKLTYSVLMELTPSARVVRYQI 379
Query: 620 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 679
TVI S + +YE AQ IIDG + + L E ++ +E+++
Sbjct: 380 RETVIHSRQRFTYEEAQAIIDG-----ADHPLAE----------------PVRLAHELAQ 418
Query: 680 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 739
L+ R GA+ + + DE G P R + L EEFMLLAN+ AE I
Sbjct: 419 KLRKARMEAGAIDFDLPEVKVELDEAGNPIRIYRKERLAAHQLIEEFMLLANRLVAETIG 478
Query: 740 -RAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLD-----TSSSGQFHQSLEQAREKLK 793
R + R H P+ K+R+ + G L+ T SS ++ L+ + +
Sbjct: 479 KRTEAPPFVYRIHDRPDAEKIRQLAQYVRVFGYHLELTEDGTVSSKALNELLQHVKGTPE 538
Query: 794 DDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVH 853
+ ++ A R M A Y + GHY LAF YTHFTSP+RRYPDL+VH
Sbjct: 539 E-----PVIEEAALRAMAKARYSTQ-------NIGHYGLAFDFYTHFTSPIRRYPDLMVH 586
Query: 854 RTLNAAL-EAEK 864
R L L +AEK
Sbjct: 587 RLLKQYLKKAEK 598
>gi|260910861|ref|ZP_05917505.1| ribonuclease R [Prevotella sp. oral taxon 472 str. F0295]
gi|260635012|gb|EEX53058.1| ribonuclease R [Prevotella sp. oral taxon 472 str. F0295]
Length = 735
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 151/441 (34%), Positives = 236/441 (53%), Gaps = 24/441 (5%)
Query: 424 IKKRLEEGDATIEMELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAILYENAIC 482
+ KR +G T + +V +I +W + E V+ V G GE + +++AIL + +
Sbjct: 175 VPKRKLKGGKTGDKAVV--KITQWPDAEHKNIMGEVIDVLGPTGENDAEMHAILAQYGLP 232
Query: 483 CSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGIS 542
+ + + + E+ Q++ R+D RN TIDP A D DDALSI L G+
Sbjct: 233 YT-YPKAAEEAAERISAEITQQDYDEREDFRNVFTCTIDPRDAKDFDDALSIRMLDKGLW 291
Query: 543 RVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAF 602
+VGVHIADVS++V G+ +D EA R+TSVY++ R IPMLP L + SL P ++LA+
Sbjct: 292 QVGVHIADVSHYVTEGSIIDKEAMKRATSVYLVDRTIPMLPERLCNFICSLRPDEEKLAY 351
Query: 603 SIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQF 662
S+ ++++ D+ I TVI+S + +YE Q +++ D ++ GE P
Sbjct: 352 SVIFNMDENADIKTYRIVHTVIKSDRRYAYEEVQQLLE---DNGVADGTGEPAPPAPKGG 408
Query: 663 EWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFL 722
+ ++ L +++K L++KR +GA++ + + F DE G P + +D N L
Sbjct: 409 YKGENADNLIMLDKLAKKLREKRLKNGAVKFDREELHFDVDEQGKPIRAYFKRSKDANKL 468
Query: 723 FEEFMLLANKTAAEVIARA----FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSS 778
EEFMLLAN+T AE + R P + R H P+ +KL F K G +L T+S+
Sbjct: 469 IEEFMLLANRTVAESVGRPKDGRAPKTLPYRVHDNPDPQKLETLREFIMKFGYKLKTTST 528
Query: 779 -GQFHQSLEQAREKL--KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFP 835
G+ +SL + +++ K + L + + A R M A Y + GH+ LAF
Sbjct: 529 KGETSRSLNKLMDEVAGKREQNLIETI---ALRAMMKAKYSIH-------NIGHFGLAFD 578
Query: 836 VYTHFTSPLRRYPDLVVHRTL 856
YTHFTSP+RRYPD +VHR L
Sbjct: 579 YYTHFTSPIRRYPDTMVHRLL 599
>gi|325299554|ref|YP_004259471.1| ribonuclease R [Bacteroides salanitronis DSM 18170]
gi|324319107|gb|ADY36998.1| ribonuclease R [Bacteroides salanitronis DSM 18170]
Length = 715
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 179/565 (31%), Positives = 259/565 (45%), Gaps = 89/565 (15%)
Query: 306 NYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDG 365
N N P + ++ MN A+ + K P G V+ I+ER+ +
Sbjct: 94 NGKNSFTPDEGGAPIFIAERNAAHAMNGDRVRVALCARRKRKEPEGEVIEILERA--KTT 151
Query: 366 IVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDL--PDS 423
VG L V + + + LT + L D+ P
Sbjct: 152 FVGTLKVTKNYAF-----------------------LLTESS-------TLANDIFIPKE 181
Query: 424 IKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICC 483
K ++GD + RI EW +E+ P V+ V G+ G+ +++AIL E +
Sbjct: 182 KLKGGKDGDKAV------VRITEWPDEAKNPFGEVVDVLGKAGDNNTEMHAILAEYGLPY 235
Query: 484 SGFSPESL-SCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGIS 542
+ P S+ + + E+ E+ R+D R FTIDP A D DDALSI L G+
Sbjct: 236 T--YPASVEAAAEKLSAEITPEDYAEREDFRTVTTFTIDPKDAKDFDDALSIRPLKPGLW 293
Query: 543 RVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAF 602
VGVHIADVS++V G A+D EA R+TSVY++ R IPMLP L + SL P ++LA+
Sbjct: 294 EVGVHIADVSHYVKEGGAIDKEAVKRATSVYLVDRTIPMLPERLCNFICSLRPNEEKLAY 353
Query: 603 SIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQF 662
S+ + LN +V D I TVI+S + +YE AQ II+ G G
Sbjct: 354 SVIFTLNDNAEVKDYRIRHTVIKSDRRFTYEEAQAIIE----------TGTG-------- 395
Query: 663 EWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFL 722
D I L +++ L+ +R G++ + + F DE G P ++ N L
Sbjct: 396 ---DYTYEILELNRLAQQLRARRMAAGSIDFDRVEVKFEIDEKGKPLSVYFKQSKEANKL 452
Query: 723 FEEFMLLANKTAAEVIA--------RAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLD 774
EEFMLLAN+T AE I + FP R H P+ KL F ++ G ++
Sbjct: 453 IEEFMLLANRTVAEHIGKVPKNKKPKVFP----YRIHDLPDPMKLENLNQFIARFGYKIR 508
Query: 775 TSSSG-QFHQSLEQAREKL--KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYA 831
T S + +SL + + K + L + + + R MQ A Y + GHY
Sbjct: 509 TGGSKTEVSRSLNRLLSDVSGKKEQNLIETV---SLRAMQKARYSIH-------NIGHYG 558
Query: 832 LAFPVYTHFTSPLRRYPDLVVHRTL 856
LAF YTHFTSP+RRYPDL+VHR L
Sbjct: 559 LAFDYYTHFTSPIRRYPDLMVHRLL 583
>gi|345303465|ref|YP_004825367.1| ribonuclease R [Rhodothermus marinus SG0.5JP17-172]
gi|345112698|gb|AEN73530.1| ribonuclease R [Rhodothermus marinus SG0.5JP17-172]
Length = 751
Score = 227 bits (578), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 159/432 (36%), Positives = 219/432 (50%), Gaps = 41/432 (9%)
Query: 440 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 499
V ID +++ P+ VL V G + Q+ A+ + +GF L +P
Sbjct: 201 VVVSIDRFDDPKASPEGRVLEVLGPASDPRVQVLALALSKDVR-TGFPEAVLKEAERIPD 259
Query: 500 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 559
+P+ E R DLR+ +FTIDPS A D DDAL + RL +G VGVHIADVSY+V PG+
Sbjct: 260 TIPEREHRRRLDLRDREVFTIDPSDAKDFDDALHLRRLPNGHIEVGVHIADVSYYVRPGS 319
Query: 560 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 619
ALD EA R TSVY++ R IPMLP LS +V SL PG D+L +S+ +L + VV I
Sbjct: 320 ALDEEAYQRGTSVYLVDRVIPMLPEKLSNQVCSLRPGEDKLTYSVLMELTPSARVVRYQI 379
Query: 620 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 679
TVI S + +YE AQ IIDG + + L E ++ +E+++
Sbjct: 380 RETVIHSRQRFTYEEAQAIIDG-----TDHPLAE----------------PVRLAHELAQ 418
Query: 680 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 739
L+ R GA+ + + DE G P R + L EEFMLLAN+ AE I
Sbjct: 419 KLRRARMEAGAIDFDLPEVKVELDEAGNPIRIYRKERLAAHQLIEEFMLLANRLVAETIG 478
Query: 740 -RAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLD-----TSSSGQFHQSLEQAREKLK 793
RA + R H P+ K+R+ + G L+ T SS ++ L+ + +
Sbjct: 479 KRAEAPPFVYRIHDRPDAEKIRQLAQYVRVFGYHLELTEDGTVSSKALNELLQHVKGTPE 538
Query: 794 DDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVH 853
+ ++ A R M A Y + GHY LAF YTHFTSP+RRYPDL+VH
Sbjct: 539 E-----PVIEEAALRAMAKARYSTQ-------NIGHYGLAFDFYTHFTSPIRRYPDLMVH 586
Query: 854 RTLNAAL-EAEK 864
R L L +AEK
Sbjct: 587 RLLKQYLKKAEK 598
>gi|19173030|ref|NP_597581.1| similarity to DIS3 PROTEIN (RNASE II FAMILY) [Encephalitozoon
cuniculi GB-M1]
gi|19168697|emb|CAD26216.1| similarity to DIS3 PROTEIN (RNASE II FAMILY) [Encephalitozoon
cuniculi GB-M1]
Length = 835
Score = 227 bits (578), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 169/537 (31%), Positives = 249/537 (46%), Gaps = 73/537 (13%)
Query: 401 IQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLH 460
+ + P + P + + + + KRL ID W S +P H
Sbjct: 287 VLVIPIDRRIPAIRIRTSQAEELMNKRL------------CVEIDGWERTSNYPSGHYYR 334
Query: 461 VFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW--------EVPQEELL--SRK 510
G G+ ++ A+L N I + ++ + + VPW E E+ +R+
Sbjct: 335 RLGTLGDRNAEMEAVLVANGIT---YYNKNWAEILRVPWMNEDIFGMEKAYNEVREGTRE 391
Query: 511 DLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRST 570
D R I +IDP D+DDAL L +G VGVHIADV+Y+V G+ +D A R T
Sbjct: 392 DFRELSIVSIDPPDCEDIDDALHCRLLPNGNWEVGVHIADVTYYVTKGSEIDKIAADRGT 451
Query: 571 SVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKL 630
++Y+ + +I MLP LS ++ SL G DR AFS+ W+++S VV R++IRS
Sbjct: 452 TIYLPEWRIDMLPPALSTDLCSLVAGKDRAAFSVVWEMSSDVRVVRTHFCRSLIRSKRSF 511
Query: 631 SYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGA 690
SY A D + G D +V RS++ L E+S++L+ +RF G+
Sbjct: 512 SYNEAYDAVQGLVDA------------------GDEVSRSLRMLLEISRVLRSRRFAKGS 553
Query: 691 LRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRR 750
L L + +F E G NFL EEFM+LAN + A I PDS+LLR+
Sbjct: 554 LDLSTRQ--LVFREGGFEMKEYFP----TNFLVEEFMVLANISVASFIYHHHPDSSLLRK 607
Query: 751 HPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPM 810
HP P++ + GL +DTSS +SLE K + V D+ R M
Sbjct: 608 HPPPSVLDI----------GLDIDTSSPRALSESLE------KMEGVRKDLAKRMLIRSM 651
Query: 811 QLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE--KLYWK 868
A Y SG + HY LA P+YTHFTSP+RRY D++VHR LN L+ K
Sbjct: 652 NQAVYVVSG---ETPSLHHYGLATPIYTHFTSPIRRYADIIVHRILNHILQTAPTKEAQI 708
Query: 869 HRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVA 925
++ + R+ G + +F D+D ++ R AA K C + V +A
Sbjct: 709 NKLGIVTFRARKRTDGESMDEVFVDEDMCRNMNSRHR---AARKAAWECDKLTVYMA 762
>gi|374338492|ref|YP_005095206.1| 3'-to-5' exoribonuclease RNase R 1 [Streptococcus macedonicus
ACA-DC 198]
gi|372284606|emb|CCF02894.1| 3'-to-5' exoribonuclease RNase R 1 [Streptococcus macedonicus
ACA-DC 198]
Length = 781
Score = 227 bits (578), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 148/421 (35%), Positives = 223/421 (52%), Gaps = 28/421 (6%)
Query: 438 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC 496
E++ ID++ + HV + G G+V + +L E+ S F + ++
Sbjct: 181 EIIKVDIDKYPTRGHDYFVGHVRDIVGHQGDVGIDVLEVL-ESMDIKSEFPEDVMAEANA 239
Query: 497 VPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVL 556
VP +++++ R DLRN FTID + A DLDDA+ I+ L++G +GVHIADVSY+V
Sbjct: 240 VPDAPSEKDMIGRVDLRNEITFTIDGADAKDLDDAVHIKLLNNGNFELGVHIADVSYYVT 299
Query: 557 PGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD 616
+AL+ EA R TSVY+ R +PMLP LS + SLNP VDRL S +++ G VV+
Sbjct: 300 EDSALNREAVARGTSVYVTDRVVPMLPERLSNGICSLNPNVDRLTLSCLMEIDRNGHVVN 359
Query: 617 RWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 676
I ++VI++ +++Y DII G +L Q++ +V SI +
Sbjct: 360 HQICQSVIKTTFRMTYSDVNDIIAGD-------------EELIEQYQP--IVDSIHHMTA 404
Query: 677 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 736
+ IL+ R GAL + S+ + ++ G P D VL R + E FML AN+T AE
Sbjct: 405 LHNILETMRVRRGALNFDTSEAKIIVNDKGMPVDIVLRQRGIAERMIESFMLAANETVAE 464
Query: 737 VIA-RAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDD 795
A R P + R H P KL++F + S G+Q+ +++ Q+L+ EK++
Sbjct: 465 HFAKRKLP--FIYRIHEEPKAEKLQKFLDYASIFGVQIHGTANKITQQALQDFMEKVEGK 522
Query: 796 YVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRT 855
++L R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 523 PGA-EVLNMMLLRSMQQARY-------SEHNHGHYGLAAEYYTHFTSPIRRYPDLLVHRM 574
Query: 856 L 856
+
Sbjct: 575 I 575
>gi|374290343|ref|YP_005037396.1| ribonuclease R [Blattabacterium sp. (Cryptocercus punctulatus) str.
Cpu]
gi|358377135|gb|AEU09323.1| ribonuclease R [Blattabacterium sp. (Cryptocercus punctulatus) str.
Cpu]
Length = 659
Score = 227 bits (578), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 136/428 (31%), Positives = 213/428 (49%), Gaps = 38/428 (8%)
Query: 438 ELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV 497
E V RI W + P ++ VFG+ GE +I ++L E + FS E +
Sbjct: 133 EKVLVRIITWPKNLKNPLGEIIKVFGQSGEYTTEIYSLLEEYGLSYE-FSKEVEKEAKKI 191
Query: 498 PWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLP 557
++ + L R+D+RN FTIDP A D DDALSI +L+ +G+HIADV+Y++
Sbjct: 192 VFKKNLDNNLRRRDMRNINTFTIDPFDAKDFDDALSIRKLNYNTWEIGIHIADVTYYIKE 251
Query: 558 GTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR 617
G+ LD EA RS S+Y + + IPMLP +LS ++ SL+P D+L+FS ++++S G ++
Sbjct: 252 GSLLDKEAYTRSNSIYFIGKSIPMLPKILSNDICSLHPEKDKLSFSSIFNVDSKGKILKS 311
Query: 618 WIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEV 677
W G+T+IRS + +YE Q II+ K D + + +L+
Sbjct: 312 WFGKTIIRSNRRFTYEEVQKIIEKK---------------------RGDFHKDLYTLFTF 350
Query: 678 SKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEV 737
SKI R +G++ L+ + DE PY L + + L EEFMLLAN+ +E
Sbjct: 351 SKIFTKNRLKNGSIYLDKVEIKIHLDEKKNPYKLDLEKNNEAHRLIEEFMLLANRKISEF 410
Query: 738 IARAFP-----DSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKL 792
++ + + R H P+ +K+ + G LD + + L + +
Sbjct: 411 VSLNLDGNPSNKTYIYRIHDKPDFQKIFILKKIIEPLGYSLDLKNLKKSLNGLLKNIQGK 470
Query: 793 KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 852
+ +++ N R M A Y + GHY L+F Y+HFTSP+RRY D++
Sbjct: 471 SEQ----NMIENLILRSMSKAKY-------STNNIGHYGLSFIYYSHFTSPIRRYSDIIA 519
Query: 853 HRTLNAAL 860
HR LN L
Sbjct: 520 HRLLNYYL 527
>gi|419532199|ref|ZP_14071716.1| ribonuclease R [Streptococcus pneumoniae GA47794]
gi|379606369|gb|EHZ71117.1| ribonuclease R [Streptococcus pneumoniae GA47794]
Length = 784
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 166/526 (31%), Positives = 263/526 (50%), Gaps = 48/526 (9%)
Query: 438 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC 496
E++ ID++ +++ F A VL V G +V + +L E+ S F +
Sbjct: 179 EVLKVFIDKYPSKKHDFFVASVLDVVGHSTDVGIDVLEVL-ESMDIVSEFPEAVVKEAES 237
Query: 497 VPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVL 556
VP Q+++ R DLR+ FTID + A DLDDA+ I+ L +G +GVHIADVSY+V
Sbjct: 238 VPDAPSQKDMEGRLDLRDEITFTIDGADAKDLDDAVHIKALKNGNLELGVHIADVSYYVT 297
Query: 557 PGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD 616
G+ALD EA R+TSVY+ R +PMLP LS + SLNP VDRL S +++ G VV+
Sbjct: 298 EGSALDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPQVDRLTQSAIMEIDKHGRVVN 357
Query: 617 RWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 676
I +TVI++ +++Y DI+ G D E E+ +V SI+ + +
Sbjct: 358 YTITQTVIKTSFRMTYSDVNDILAG--DEEKRK-------------EYHKIVPSIELMAK 402
Query: 677 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 736
+ + L++ R GAL + ++ L D+ G P D VL R + E FML+AN+T AE
Sbjct: 403 LHETLENMRVKRGALNFDTNEAKILVDKQGKPVDIVLRQRGIAERMIESFMLMANETVAE 462
Query: 737 VIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDD 795
++ P + R H P K+++F + S GL++ ++S ++L+ ++ +
Sbjct: 463 HFSKLDLP--FIYRIHEEPKAEKVQKFIDYASSFGLRIYGTASEISQEALQDIMRAVEGE 520
Query: 796 -YVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 854
Y D+L R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 PYA--DVLFMMLLRSMQQARY-------SEHNHGHYGLAADYYTHFTSPIRRYPDLLVHR 571
Query: 855 TLNAALEAEKLYWKHRRMLPK------NNHREGVRGRFLTGIFYDKDAAESLEGRE--AL 906
+ ++++ +++P+ N R + + E G E A+
Sbjct: 572 MIRDYGRSKEIAEHFEQVIPEIATQSSNRERRAIEAEREVEAMKKAEYMEEYVGEEYDAV 631
Query: 907 SVAALKYGV-----PCADILVNVAT-----HCNDRKLACRNVKDAC 942
+ +K+G+ + L+++ H N+R L R K
Sbjct: 632 VSSIVKFGLFVELPNTVEGLIHITNLPEFYHFNERDLTLRGEKSGI 677
>gi|206603225|gb|EDZ39705.1| Exoribonuclease II [Leptospirillum sp. Group II '5-way CG']
Length = 744
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 177/533 (33%), Positives = 257/533 (48%), Gaps = 71/533 (13%)
Query: 330 GMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKN 389
M+ + LS ++ + R G+VV II RS R +VG L+ KGG
Sbjct: 111 AMHQDKVLSVLLGTDHRGRSEGQVVEIISRS--RSSVVGVLH-----ELKGG-------- 155
Query: 390 RSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNE 449
Y L+P PK P ++V D+ ++L+EG ELV I + E
Sbjct: 156 ----------YF-LSPRDPKIPHEFLVV----DNSSEKLKEG------ELVVLDILRYPE 194
Query: 450 ESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSR 509
P+ + G + + ++ + + S F + + EV E +R
Sbjct: 195 PGHIPEGKISRFLGDPSDPSVDTDLVIATHHLSIS-FPDRVEAEAKRMAREVEVEPSENR 253
Query: 510 KDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRS 569
DLR+ I TID A D DDALS+ DG ++G+HIADV+ +VLPG+ LD EA R
Sbjct: 254 VDLRHLEIMTIDGDRARDFDDALSVVESPDGTFQIGIHIADVAAYVLPGSELDKEAFRRG 313
Query: 570 TSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCK 629
TSVY R +PM P +LS V SLNP DRLA ++ ++ AG V++ I R+VIRS +
Sbjct: 314 TSVYFPDRVVPMFPEVLSNGVLSLNPDEDRLARTVMVRMSPAGQVLESSIFRSVIRSRLR 373
Query: 630 LSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDG 689
+Y I+ G ES+++ P+ S ++SL+ ++K L+D+RF +G
Sbjct: 374 ATYSRVHPILAG----ESTDS-----PE-------SKFSVQLRSLWTLAKKLRDERFQNG 417
Query: 690 ALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLR 749
+L + +P + D G P D + S R +FL EEFMLLAN+ A + R F A+ R
Sbjct: 418 SLDFDLPEPEIVLDLRGEPVDIIRSPRYLSHFLVEEFMLLANRIVAAELTRRF-SMAMYR 476
Query: 750 RHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQS-----LEQAREKLKDDYVLFDILIN 804
H P+ K F G+ + G+ S LE R + V F +L
Sbjct: 477 VHETPSPEKTESLGIFLGALGISIPKRKEGRMRASDLSAVLESTRGTPLEKMVHFSVL-- 534
Query: 805 YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLN 857
R ++ A Y D GH+ LA YTHFTSP+RRYPDL+VHR L+
Sbjct: 535 ---RSLKQARY-------DVYPLGHFGLAMDDYTHFTSPIRRYPDLIVHRLLD 577
>gi|84999110|ref|XP_954276.1| exosome complex exonuclease rrp44 [Theileria annulata]
gi|65305274|emb|CAI73599.1| exosome complex exonuclease rrp44, putative [Theileria annulata]
Length = 955
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 152/453 (33%), Positives = 228/453 (50%), Gaps = 50/453 (11%)
Query: 435 IEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCL 494
+E + +D W+ S P H + G + + IL E+ + FS +S L
Sbjct: 412 LENNRIVVEVDSWDRFSKRPNGHWTEILGPIDDRNVESTVILREHQVITEDFSLQSYRHL 471
Query: 495 PCVP-----------------WEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERL 537
+ ++ E L R D R+ +F++DP D+DDAL +RL
Sbjct: 472 GLITSSLVDTSSTEKDEDKSDIKITPELLGGRVDYRDEVVFSVDPPGCKDIDDALGCKRL 531
Query: 538 SDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGV 597
S+G V VHIADV+YFV G+ LD EA R T+VY++ R+ MLP LL+ + SL V
Sbjct: 532 SNGNFEVSVHIADVTYFVPEGSNLDKEASERCTTVYLVDRRTDMLPKLLTTNLCSLMSDV 591
Query: 598 DRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQ 657
+RL FS++W+++ G ++ ++VI+S L+Y+ AQ++ID SSN
Sbjct: 592 NRLTFSVYWEMDMNGVILATKFSKSVIKSRRSLTYQQAQEMIDS-----SSN-------- 638
Query: 658 LYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGRE 717
+V S+++L +SKIL+ +R GA+ LE+S+ F FD VL+
Sbjct: 639 -------DEVSVSLRNLNNLSKILRKQRIERGAVELESSEVKFEFD-----MSKVLNLES 686
Query: 718 ----DLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGL-Q 772
+ N + EEFMLLAN + A I FP +LLR HP P KL E + +
Sbjct: 687 YKTYETNQMVEEFMLLANISVATKIFERFPKCSLLRVHPPPVEEKLNELNRTLQQQNITS 746
Query: 773 LDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYAL 832
+S Q ++SLE + + D + ++ TR M A Y S D +D ++ HY L
Sbjct: 747 FKYGNSKQLNESLEIVKNEKNDKFTTATKIL--TTRTMSQALYRNSNDLDED-EFKHYGL 803
Query: 833 AFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 865
YTHFTSP+RRY D++VHR L +AL+ L
Sbjct: 804 CCEYYTHFTSPIRRYADVIVHRLLASALDLAPL 836
>gi|307704704|ref|ZP_07641603.1| ribonuclease R [Streptococcus mitis SK597]
gi|307621751|gb|EFO00789.1| ribonuclease R [Streptococcus mitis SK597]
Length = 784
Score = 226 bits (577), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 166/526 (31%), Positives = 262/526 (49%), Gaps = 48/526 (9%)
Query: 438 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC 496
E++ ID++ +++ F A VL V G +V + +L E+ S F +
Sbjct: 179 EVLKVFIDKYPSKKHDFFVASVLDVVGHSTDVGIDVLEVL-ESMDIVSEFPEAVVKEAES 237
Query: 497 VPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVL 556
VP Q+++ R DLR+ FTID + A DLDDA+ I+ L +G +GVHIADVSY+V
Sbjct: 238 VPDAPSQKDMEGRLDLRDEITFTIDGADAKDLDDAVHIKALKNGNLELGVHIADVSYYVT 297
Query: 557 PGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD 616
G+ALD EA R+TSVY+ R +PMLP LS + SLNP VDRL S +++ G VV+
Sbjct: 298 EGSALDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPQVDRLTQSAIMEIDKHGRVVN 357
Query: 617 RWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 676
I +TVI++ +++Y DI+ G D E E+ +V SI+ + +
Sbjct: 358 YTITQTVIKTSFRMTYSDVNDILAG--DEEKRQ-------------EYQKIVPSIQLMAK 402
Query: 677 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 736
+ + L++ R GAL + ++ L D+ G P D VL R + E FML+AN+T AE
Sbjct: 403 LHETLENMRMKRGALNFDTNEAKILVDKQGKPVDIVLRQRGVAERMIESFMLMANETVAE 462
Query: 737 VIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDD 795
++ P + R H P K+++F + S GL + ++S ++L+ ++ +
Sbjct: 463 HFSKLDLP--FIYRIHEEPKAEKVQKFIDYASSFGLHIYGTASEISQEALQDIMRTVEGE 520
Query: 796 -YVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 854
Y D+L R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 PYA--DVLSMMLLRSMQQARY-------SEHNHGHYGLAADYYTHFTSPIRRYPDLLVHR 571
Query: 855 TLNAALEAEKLYWKHRRMLPK------NNHREGVRGRFLTGIFYDKDAAESLEGRE--AL 906
+ ++++ +++P+ N R + + E G E A+
Sbjct: 572 MIRDYGRSKEIAEHFEQVIPEIATQSSNRERRAIEAEREVEAMKKAEYMEEYVGEEYDAV 631
Query: 907 SVAALKYGV-----PCADILVNVAT-----HCNDRKLACRNVKDAC 942
+ +K+G+ + L+++ H N+R L R K
Sbjct: 632 VSSIVKFGLFVELPNTVEGLIHITNLPEFYHFNERDLTLRGEKSGT 677
>gi|417923309|ref|ZP_12566778.1| ribonuclease R [Streptococcus mitis SK569]
gi|342837113|gb|EGU71312.1| ribonuclease R [Streptococcus mitis SK569]
Length = 784
Score = 226 bits (577), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 166/526 (31%), Positives = 262/526 (49%), Gaps = 48/526 (9%)
Query: 438 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC 496
E++ ID++ +++ F A VL V G +V + +L E+ S F +
Sbjct: 179 EVLKVFIDKYPSKKHDFFVASVLDVVGHSTDVGIDVLEVL-ESMDIVSEFPEAVVKEAKS 237
Query: 497 VPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVL 556
VP Q+++ R DLR+ FTID + A DLDDA+ I+ L +G +GVHIADVSY+V
Sbjct: 238 VPDAPSQKDMEGRLDLRDEITFTIDGADAKDLDDAVHIKALKNGNLELGVHIADVSYYVT 297
Query: 557 PGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD 616
G+ LD EA R+TSVY+ R +PMLP LS + SLNP VDRL S +++ G VV+
Sbjct: 298 EGSTLDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPQVDRLTQSAIMEIDKHGRVVN 357
Query: 617 RWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 676
I +TVI++ +++Y DI+ G D E E+ +V SI+ + +
Sbjct: 358 YTITQTVIKTSFRMTYSDVNDILAG--DEEKRQ-------------EYQKIVPSIELMAK 402
Query: 677 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 736
+ +IL+ R GAL + ++ L D+ G P D VL R + E FML+AN+T AE
Sbjct: 403 LHEILESMRVKRGALNFDTNEAKILVDKQGKPVDIVLRQRGVAERMIESFMLMANETVAE 462
Query: 737 VIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDD 795
++ P + R H P K+++F + S GL++ ++S ++L+ ++ +
Sbjct: 463 HFSKLNLP--FIYRIHEEPKAEKVQKFIDYASSFGLRIYGTASEISQEALQDIMRTVEGE 520
Query: 796 -YVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 854
Y D+L R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 PYA--DVLSMMLLRSMQQARY-------SEQNHGHYGLAADYYTHFTSPIRRYPDLLVHR 571
Query: 855 TLNAALEAEKLYWKHRRMLPK------NNHREGVRGRFLTGIFYDKDAAESLEGRE--AL 906
+ ++++ +++P+ N R + + E G E A+
Sbjct: 572 MIRDYGRSKEIAEHFEQVIPEIATQSSNRERRAIEAEREVEAMKKAEYMEEYVGEEYDAV 631
Query: 907 SVAALKYGV-----PCADILVNVAT-----HCNDRKLACRNVKDAC 942
+ +K+G+ + L+++ H N+R L R K
Sbjct: 632 VSSNVKFGLFVELPNTVEGLIHITNLPEFYHFNERDLTLRGEKSGT 677
>gi|182683920|ref|YP_001835667.1| VacB/Rnb family exoribonuclease [Streptococcus pneumoniae CGSP14]
gi|182629254|gb|ACB90202.1| exoribonuclease, VacB/Rnb family [Streptococcus pneumoniae CGSP14]
Length = 784
Score = 226 bits (577), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 166/526 (31%), Positives = 263/526 (50%), Gaps = 48/526 (9%)
Query: 438 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC 496
E++ ID++ +++ F A VL V G +V + +L E+ S F +
Sbjct: 179 EVLKVFIDKYPSKKHDFFAASVLDVVGHSTDVGIDVLEVL-ESMDIVSEFPEAVVKEAES 237
Query: 497 VPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVL 556
VP Q+++ R DLR+ FTID + A DLDDA+ I+ L +G +GVHIADVSY+V
Sbjct: 238 VPDAPSQKDMEGRLDLRDEITFTIDGADAKDLDDAVHIKALKNGNLELGVHIADVSYYVT 297
Query: 557 PGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD 616
G+ALD EA R+TSVY+ R +PMLP LS + SLNP VDRL S +++ G VV+
Sbjct: 298 EGSALDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPQVDRLTQSAIMEIDKHGRVVN 357
Query: 617 RWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 676
I +TVI++ +++Y DI+ G D E E+ +V SI+ + +
Sbjct: 358 YTITQTVIKTSFRMTYSDVNDILAG--DEEKRK-------------EYHKIVSSIELMAK 402
Query: 677 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 736
+ + L++ R GAL + ++ L D+ G P D VL R + E FML+AN+T AE
Sbjct: 403 LHETLENMRVKRGALNFDTNEAKILVDKQGKPVDIVLRQRGIAERMIESFMLMANETVAE 462
Query: 737 VIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDD 795
++ P + R H P K+++F + S GL++ ++S ++L+ ++ +
Sbjct: 463 HFSKLDLP--FIYRIHEEPKAEKVQKFIDYASSFGLRIYGTASEISQEALQDIMRAVEGE 520
Query: 796 -YVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 854
Y D+L R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 PYA--DVLSMMLLRSMQQARY-------SEHNHGHYGLAADYYTHFTSPIRRYPDLLVHR 571
Query: 855 TLNAALEAEKLYWKHRRMLPK------NNHREGVRGRFLTGIFYDKDAAESLEGRE--AL 906
+ ++++ +++P+ N R + + E G E A+
Sbjct: 572 MIRDYGRSKEIAEHFEQVIPEIATQSSNRERRAIEAEREVEAMKKAEYMEEYVGEEYDAV 631
Query: 907 SVAALKYGV-----PCADILVNVAT-----HCNDRKLACRNVKDAC 942
+ +K+G+ + L+++ H N+R L R K
Sbjct: 632 VSSIVKFGLFVELPNTVEGLIHITNLPEFYHFNERDLTLRGEKSGI 677
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.132 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,127,320,926
Number of Sequences: 23463169
Number of extensions: 640399912
Number of successful extensions: 1738777
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6129
Number of HSP's successfully gapped in prelim test: 450
Number of HSP's that attempted gapping in prelim test: 1713523
Number of HSP's gapped (non-prelim): 11056
length of query: 973
length of database: 8,064,228,071
effective HSP length: 153
effective length of query: 820
effective length of database: 8,769,330,510
effective search space: 7190851018200
effective search space used: 7190851018200
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 82 (36.2 bits)