Query 002073
Match_columns 972
No_of_seqs 567 out of 3826
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 11:13:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002073.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002073hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3cmm_A Ubiquitin-activating en 100.0 5E-169 2E-173 1568.9 69.8 803 154-967 3-816 (1015)
2 1tt5_A APPBP1, amyloid protein 100.0 3.1E-67 1.1E-71 619.2 15.6 381 154-541 7-525 (531)
3 1y8q_B Anthracycline-, ubiquit 100.0 4.7E-64 1.6E-68 597.0 26.2 320 561-908 3-385 (640)
4 1y8q_A Ubiquitin-like 1 activa 100.0 3E-62 1E-66 550.5 28.0 322 153-542 11-338 (346)
5 1z7l_A Ubiquitin-activating en 100.0 2.1E-54 7.3E-59 468.6 19.4 230 731-967 9-238 (276)
6 1tt5_B Ubiquitin-activating en 100.0 3.4E-42 1.2E-46 396.8 19.8 235 555-889 6-268 (434)
7 2nvu_B Maltose binding protein 100.0 3.6E-39 1.2E-43 399.9 21.4 227 563-889 398-639 (805)
8 1tt5_A APPBP1, amyloid protein 100.0 7.6E-36 2.6E-40 352.1 10.2 190 555-754 12-201 (531)
9 1tt5_B Ubiquitin-activating en 100.0 9.6E-33 3.3E-37 318.2 24.6 273 168-541 29-322 (434)
10 3h8v_A Ubiquitin-like modifier 100.0 6.4E-34 2.2E-38 311.9 13.2 165 555-728 13-193 (292)
11 1y8q_A Ubiquitin-like 1 activa 100.0 5.1E-33 1.8E-37 312.8 15.9 164 555-729 16-179 (346)
12 1zud_1 Adenylyltransferase THI 100.0 7E-33 2.4E-37 298.7 13.1 165 555-728 6-173 (251)
13 2nvu_B Maltose binding protein 100.0 9.4E-31 3.2E-35 324.6 28.7 277 164-541 396-693 (805)
14 1jw9_B Molybdopterin biosynthe 100.0 1.5E-31 5.2E-36 287.9 12.8 164 556-728 10-176 (249)
15 3h5n_A MCCB protein; ubiquitin 100.0 1.1E-30 3.7E-35 294.6 17.8 166 555-729 92-265 (353)
16 1zud_1 Adenylyltransferase THI 100.0 1.2E-29 4.3E-34 273.3 19.0 152 155-308 3-160 (251)
17 1y8q_B Anthracycline-, ubiquit 100.0 3E-29 1E-33 298.7 23.3 147 164-312 3-154 (640)
18 3rui_A Ubiquitin-like modifier 100.0 7E-30 2.4E-34 284.3 12.2 160 563-728 22-199 (340)
19 3cmm_A Ubiquitin-activating en 100.0 5.9E-30 2E-34 319.6 10.9 184 555-756 7-193 (1015)
20 1jw9_B Molybdopterin biosynthe 100.0 4.6E-28 1.6E-32 260.7 19.5 154 153-308 4-163 (249)
21 3h8v_A Ubiquitin-like modifier 100.0 4.4E-28 1.5E-32 265.7 17.1 149 159-310 14-183 (292)
22 3vh1_A Ubiquitin-like modifier 100.0 1.3E-28 4.4E-33 290.2 12.6 165 556-728 301-492 (598)
23 4gsl_A Ubiquitin-like modifier 99.9 1.9E-28 6.6E-33 288.6 12.0 160 563-728 314-491 (615)
24 2v31_A Ubiquitin-activating en 99.9 7.1E-29 2.4E-33 233.3 6.4 111 309-420 1-111 (112)
25 3h5n_A MCCB protein; ubiquitin 99.9 6.9E-27 2.4E-31 263.6 17.8 151 155-307 89-250 (353)
26 3rui_A Ubiquitin-like modifier 99.9 1.1E-24 3.8E-29 242.6 16.1 155 155-312 11-184 (340)
27 3vh1_A Ubiquitin-like modifier 99.9 1.5E-24 5.1E-29 255.7 15.5 154 155-311 297-476 (598)
28 4gsl_A Ubiquitin-like modifier 99.9 5.6E-24 1.9E-28 250.8 14.8 144 166-312 314-476 (615)
29 1z7l_A Ubiquitin-activating en 99.0 5.6E-10 1.9E-14 121.1 9.1 67 826-905 207-275 (276)
30 3dfz_A SIRC, precorrin-2 dehyd 97.2 0.00066 2.2E-08 71.5 9.0 98 175-301 28-125 (223)
31 3jyo_A Quinate/shikimate dehyd 97.0 0.0014 4.9E-08 71.4 8.4 79 175-272 124-202 (283)
32 3jyo_A Quinate/shikimate dehyd 96.8 0.0011 3.8E-08 72.3 6.0 79 572-682 124-202 (283)
33 1kyq_A Met8P, siroheme biosynt 96.8 0.0041 1.4E-07 67.4 10.1 118 175-302 10-145 (274)
34 1pjq_A CYSG, siroheme synthase 96.7 0.0094 3.2E-07 69.2 12.9 100 175-302 9-108 (457)
35 3dfz_A SIRC, precorrin-2 dehyd 96.6 0.0028 9.7E-08 66.7 7.0 92 572-703 28-119 (223)
36 3ic5_A Putative saccharopine d 96.6 0.005 1.7E-07 56.3 7.9 96 575-706 5-100 (118)
37 3llv_A Exopolyphosphatase-rela 96.5 0.02 6.9E-07 54.6 11.7 93 176-298 4-102 (141)
38 3ic5_A Putative saccharopine d 96.2 0.017 5.7E-07 52.7 9.3 89 178-296 5-98 (118)
39 2g1u_A Hypothetical protein TM 96.1 0.035 1.2E-06 54.1 11.6 104 173-300 14-119 (155)
40 2hmt_A YUAA protein; RCK, KTN, 96.1 0.014 4.9E-07 55.1 8.4 89 173-289 1-96 (144)
41 3tum_A Shikimate dehydrogenase 95.8 0.016 5.5E-07 62.6 8.1 73 573-682 123-195 (269)
42 3llv_A Exopolyphosphatase-rela 95.8 0.03 1E-06 53.4 9.1 95 574-703 5-99 (141)
43 3t4e_A Quinate/shikimate dehyd 95.7 0.025 8.6E-07 62.4 9.1 80 176-272 146-228 (312)
44 3tnl_A Shikimate dehydrogenase 95.6 0.018 6.3E-07 63.6 7.9 83 573-682 152-234 (315)
45 2g1u_A Hypothetical protein TM 95.6 0.03 1E-06 54.6 8.5 94 570-697 14-107 (155)
46 3tnl_A Shikimate dehydrogenase 95.6 0.032 1.1E-06 61.6 9.5 80 176-272 152-234 (315)
47 1lss_A TRK system potassium up 95.6 0.068 2.3E-06 50.2 10.5 84 179-289 5-94 (140)
48 1id1_A Putative potassium chan 95.4 0.09 3.1E-06 51.0 11.2 96 176-297 1-103 (153)
49 3tum_A Shikimate dehydrogenase 95.4 0.037 1.3E-06 59.7 9.0 73 176-272 123-195 (269)
50 2hmt_A YUAA protein; RCK, KTN, 95.3 0.028 9.6E-07 53.0 6.8 36 572-613 3-38 (144)
51 3fwz_A Inner membrane protein 95.2 0.12 4.1E-06 49.5 11.0 90 178-295 7-102 (140)
52 4ina_A Saccharopine dehydrogen 95.1 0.036 1.2E-06 63.2 8.2 103 576-705 2-106 (405)
53 1kyq_A Met8P, siroheme biosynt 95.0 0.03 1E-06 60.7 6.9 110 572-703 10-138 (274)
54 1lss_A TRK system potassium up 95.0 0.041 1.4E-06 51.7 7.1 88 576-697 5-92 (140)
55 3t4e_A Quinate/shikimate dehyd 95.0 0.033 1.1E-06 61.5 7.3 83 573-682 146-228 (312)
56 3o8q_A Shikimate 5-dehydrogena 95.0 0.038 1.3E-06 60.1 7.5 73 573-683 124-196 (281)
57 3pwz_A Shikimate dehydrogenase 95.0 0.033 1.1E-06 60.2 7.0 73 573-683 118-190 (272)
58 3e8x_A Putative NAD-dependent 94.9 0.043 1.5E-06 56.7 7.4 39 569-613 15-54 (236)
59 1id1_A Putative potassium chan 94.8 0.16 5.4E-06 49.2 10.8 94 574-698 2-95 (153)
60 1pjq_A CYSG, siroheme synthase 94.6 0.057 2E-06 62.6 8.3 91 573-702 10-100 (457)
61 3c85_A Putative glutathione-re 94.6 0.079 2.7E-06 52.9 8.2 87 176-290 37-131 (183)
62 3abi_A Putative uncharacterize 94.5 0.067 2.3E-06 59.8 8.3 94 574-706 15-108 (365)
63 2ph5_A Homospermidine synthase 94.4 0.04 1.4E-06 63.9 6.3 102 575-708 13-116 (480)
64 3pwz_A Shikimate dehydrogenase 94.4 0.055 1.9E-06 58.4 7.1 72 176-273 118-190 (272)
65 3gvi_A Malate dehydrogenase; N 94.4 0.1 3.5E-06 57.8 9.3 75 176-272 5-83 (324)
66 3l4b_C TRKA K+ channel protien 94.4 0.12 4.2E-06 53.1 9.4 92 180-299 2-99 (218)
67 3qsg_A NAD-binding phosphogluc 94.4 0.13 4.6E-06 56.2 10.2 36 176-211 22-57 (312)
68 3oj0_A Glutr, glutamyl-tRNA re 94.3 0.024 8.3E-07 54.6 3.5 38 570-613 16-53 (144)
69 3o8q_A Shikimate 5-dehydrogena 94.2 0.077 2.6E-06 57.6 7.7 73 176-273 124-196 (281)
70 3oj0_A Glutr, glutamyl-tRNA re 94.0 0.048 1.6E-06 52.5 5.0 72 176-274 19-90 (144)
71 3l4b_C TRKA K+ channel protien 94.0 0.076 2.6E-06 54.7 6.8 88 576-697 1-88 (218)
72 3abi_A Putative uncharacterize 93.9 0.035 1.2E-06 62.1 4.5 87 178-297 16-107 (365)
73 3don_A Shikimate dehydrogenase 93.8 0.11 3.6E-06 56.4 7.8 38 572-614 114-151 (277)
74 3e8x_A Putative NAD-dependent 93.8 0.17 5.9E-06 52.1 9.1 101 172-301 15-133 (236)
75 1hyh_A L-hicdh, L-2-hydroxyiso 93.8 0.33 1.1E-05 52.9 11.7 73 179-274 2-79 (309)
76 3d0o_A L-LDH 1, L-lactate dehy 93.7 0.15 5.3E-06 56.0 9.1 78 173-273 1-83 (317)
77 4ina_A Saccharopine dehydrogen 93.7 0.17 5.7E-06 57.7 9.6 95 179-296 2-105 (405)
78 2egg_A AROE, shikimate 5-dehyd 93.7 0.045 1.5E-06 59.8 4.7 36 176-211 139-174 (297)
79 2z2v_A Hypothetical protein PH 93.6 0.065 2.2E-06 60.3 5.8 94 574-706 15-108 (365)
80 1ldn_A L-lactate dehydrogenase 93.5 0.26 9E-06 54.1 10.5 72 178-272 6-82 (316)
81 2d4a_B Malate dehydrogenase; a 93.5 0.38 1.3E-05 52.7 11.7 71 180-272 1-75 (308)
82 2z2v_A Hypothetical protein PH 93.5 0.05 1.7E-06 61.2 4.7 88 177-297 15-107 (365)
83 3p7m_A Malate dehydrogenase; p 93.5 0.17 5.8E-06 56.0 8.8 75 176-272 3-81 (321)
84 2aef_A Calcium-gated potassium 93.3 0.15 5.2E-06 53.0 7.8 92 177-299 8-105 (234)
85 2raf_A Putative dinucleotide-b 93.3 0.16 5.6E-06 52.2 7.9 37 571-613 15-51 (209)
86 3rku_A Oxidoreductase YMR226C; 93.2 0.25 8.7E-06 53.2 9.6 90 569-682 27-123 (287)
87 1hdo_A Biliverdin IX beta redu 93.2 0.37 1.3E-05 47.9 10.2 34 178-212 3-37 (206)
88 3ruf_A WBGU; rossmann fold, UD 93.1 0.61 2.1E-05 50.8 12.6 109 174-304 21-156 (351)
89 4gbj_A 6-phosphogluconate dehy 93.0 0.46 1.6E-05 51.7 11.4 110 178-302 5-126 (297)
90 2hk9_A Shikimate dehydrogenase 93.0 0.25 8.5E-06 53.1 9.1 36 175-211 126-161 (275)
91 4e21_A 6-phosphogluconate dehy 93.0 0.16 5.5E-06 56.9 7.8 115 176-301 20-143 (358)
92 4ezb_A Uncharacterized conserv 92.8 0.3 1E-05 53.5 9.6 84 178-284 24-107 (317)
93 3don_A Shikimate dehydrogenase 92.8 0.17 5.8E-06 54.8 7.3 106 175-294 114-229 (277)
94 2ewd_A Lactate dehydrogenase,; 92.7 0.56 1.9E-05 51.3 11.5 33 179-211 5-37 (317)
95 3vku_A L-LDH, L-lactate dehydr 92.7 0.27 9.2E-06 54.5 9.0 75 176-273 7-85 (326)
96 3gpi_A NAD-dependent epimerase 92.6 0.33 1.1E-05 51.5 9.4 96 176-304 1-114 (286)
97 3dhn_A NAD-dependent epimerase 92.6 0.57 2E-05 47.6 10.9 95 179-304 5-117 (227)
98 3t4x_A Oxidoreductase, short c 92.6 0.17 5.7E-06 53.8 7.0 83 573-682 8-93 (267)
99 3dqp_A Oxidoreductase YLBE; al 92.6 0.32 1.1E-05 49.4 8.9 94 577-707 2-106 (219)
100 3obb_A Probable 3-hydroxyisobu 92.6 0.63 2.2E-05 50.8 11.6 109 179-302 4-126 (300)
101 2raf_A Putative dinucleotide-b 92.6 0.34 1.2E-05 49.8 9.0 37 174-211 15-51 (209)
102 4egb_A DTDP-glucose 4,6-dehydr 92.5 0.35 1.2E-05 52.7 9.6 106 176-304 22-154 (346)
103 3slg_A PBGP3 protein; structur 92.5 0.34 1.2E-05 53.4 9.6 105 172-305 18-147 (372)
104 3tri_A Pyrroline-5-carboxylate 92.5 0.21 7.2E-06 53.8 7.6 36 575-613 3-38 (280)
105 3gpi_A NAD-dependent epimerase 92.4 0.27 9.3E-06 52.2 8.4 33 575-613 3-35 (286)
106 4e12_A Diketoreductase; oxidor 92.4 0.4 1.4E-05 51.5 9.8 33 178-211 4-36 (283)
107 1oju_A MDH, malate dehydrogena 92.4 0.46 1.6E-05 51.8 10.2 72 180-273 2-78 (294)
108 3rku_A Oxidoreductase YMR226C; 92.4 0.83 2.8E-05 49.1 12.2 69 171-258 26-97 (287)
109 2b69_A UDP-glucuronate decarbo 92.3 0.73 2.5E-05 50.1 11.8 105 175-304 24-146 (343)
110 3pqe_A L-LDH, L-lactate dehydr 92.3 0.34 1.2E-05 53.7 9.1 75 178-273 5-82 (326)
111 3l9w_A Glutathione-regulated p 92.3 0.37 1.3E-05 55.1 9.6 90 178-295 4-99 (413)
112 1npy_A Hypothetical shikimate 92.2 0.22 7.7E-06 53.6 7.4 67 177-273 118-184 (271)
113 4aj2_A L-lactate dehydrogenase 92.2 0.23 8E-06 55.1 7.7 77 174-272 15-95 (331)
114 3dhn_A NAD-dependent epimerase 92.2 0.28 9.6E-06 50.0 7.8 97 576-709 5-114 (227)
115 3o38_A Short chain dehydrogena 92.1 0.21 7.2E-06 52.6 6.9 35 573-613 20-56 (266)
116 3tri_A Pyrroline-5-carboxylate 92.0 0.34 1.2E-05 52.1 8.6 81 177-285 2-84 (280)
117 3hg7_A D-isomer specific 2-hyd 92.0 0.12 4E-06 57.3 4.9 38 571-614 136-173 (324)
118 2hjr_A Malate dehydrogenase; m 92.0 0.75 2.5E-05 50.8 11.4 74 177-272 13-90 (328)
119 3tl2_A Malate dehydrogenase; c 92.0 0.39 1.3E-05 52.9 9.1 77 176-272 6-86 (315)
120 1y1p_A ARII, aldehyde reductas 91.9 0.65 2.2E-05 50.1 10.7 80 574-682 10-91 (342)
121 3slg_A PBGP3 protein; structur 91.9 0.11 3.7E-06 57.5 4.5 37 571-613 20-58 (372)
122 3fbt_A Chorismate mutase and s 91.9 0.16 5.3E-06 55.3 5.6 36 573-613 120-155 (282)
123 3h2s_A Putative NADH-flavin re 91.8 0.18 6.3E-06 51.2 5.9 30 577-612 2-32 (224)
124 4id9_A Short-chain dehydrogena 91.8 0.37 1.3E-05 52.5 8.7 40 172-212 13-53 (347)
125 1xg5_A ARPG836; short chain de 91.7 0.34 1.2E-05 51.5 8.1 86 572-682 29-119 (279)
126 2h78_A Hibadh, 3-hydroxyisobut 91.6 0.37 1.3E-05 52.0 8.4 32 576-613 4-35 (302)
127 2egg_A AROE, shikimate 5-dehyd 91.6 0.28 9.5E-06 53.5 7.3 36 573-613 139-174 (297)
128 2axq_A Saccharopine dehydrogen 91.6 0.21 7.3E-06 58.0 6.8 99 572-705 20-118 (467)
129 3d1l_A Putative NADP oxidoredu 91.5 0.24 8.3E-06 52.4 6.7 81 176-284 8-88 (266)
130 3ruf_A WBGU; rossmann fold, UD 91.5 0.45 1.6E-05 51.9 9.0 38 570-613 20-58 (351)
131 1iy8_A Levodione reductase; ox 91.4 0.3 1E-05 51.6 7.3 86 572-682 10-100 (267)
132 4g65_A TRK system potassium up 91.4 0.3 1E-05 56.6 7.7 95 575-703 235-329 (461)
133 2x0j_A Malate dehydrogenase; o 91.4 0.76 2.6E-05 50.1 10.5 72 180-273 2-78 (294)
134 1hdo_A Biliverdin IX beta redu 91.3 0.49 1.7E-05 47.0 8.3 34 575-614 3-37 (206)
135 4egb_A DTDP-glucose 4,6-dehydr 91.3 0.19 6.5E-06 54.8 5.7 38 572-613 21-59 (346)
136 3gvi_A Malate dehydrogenase; N 91.3 0.34 1.2E-05 53.6 7.6 36 573-613 5-40 (324)
137 3d1l_A Putative NADP oxidoredu 91.2 0.7 2.4E-05 48.7 9.8 92 573-705 8-101 (266)
138 4ezb_A Uncharacterized conserv 91.1 0.58 2E-05 51.3 9.4 109 564-708 13-123 (317)
139 3pp8_A Glyoxylate/hydroxypyruv 91.1 0.12 4.2E-06 57.0 3.8 37 571-613 135-171 (315)
140 3ius_A Uncharacterized conserv 91.1 0.89 3E-05 47.9 10.5 97 575-712 5-108 (286)
141 3ldh_A Lactate dehydrogenase; 91.0 0.59 2E-05 51.8 9.3 73 178-272 21-97 (330)
142 3dqp_A Oxidoreductase YLBE; al 91.0 0.77 2.6E-05 46.6 9.5 91 180-302 2-109 (219)
143 3qiv_A Short-chain dehydrogena 90.9 0.4 1.4E-05 50.0 7.6 84 572-682 6-94 (253)
144 3m2p_A UDP-N-acetylglucosamine 90.9 1.3 4.4E-05 47.4 11.8 94 178-304 2-114 (311)
145 3nyw_A Putative oxidoreductase 90.9 0.27 9.2E-06 51.7 6.2 64 572-660 4-69 (250)
146 2v6b_A L-LDH, L-lactate dehydr 90.9 1 3.4E-05 49.2 10.9 71 180-273 2-76 (304)
147 1p9l_A Dihydrodipicolinate red 90.9 0.37 1.3E-05 51.2 7.3 75 577-710 2-79 (245)
148 4id9_A Short-chain dehydrogena 90.9 0.25 8.7E-06 53.8 6.2 39 569-613 13-52 (347)
149 1ur5_A Malate dehydrogenase; o 90.9 1.2 4.1E-05 48.7 11.6 73 179-273 3-79 (309)
150 3o26_A Salutaridine reductase; 90.9 0.31 1.1E-05 52.0 6.8 86 572-683 9-100 (311)
151 3phh_A Shikimate dehydrogenase 90.9 0.19 6.5E-06 54.2 5.0 33 178-211 118-150 (269)
152 1p77_A Shikimate 5-dehydrogena 90.8 0.34 1.2E-05 51.9 7.0 35 573-613 117-151 (272)
153 3lf2_A Short chain oxidoreduct 90.7 0.39 1.3E-05 50.8 7.3 85 573-682 6-95 (265)
154 1lu9_A Methylene tetrahydromet 90.6 0.24 8.3E-06 53.3 5.7 80 573-683 117-197 (287)
155 1lld_A L-lactate dehydrogenase 90.6 0.89 3.1E-05 49.3 10.2 74 178-273 7-84 (319)
156 3qvo_A NMRA family protein; st 90.6 0.8 2.7E-05 47.3 9.4 98 178-304 23-130 (236)
157 1a5z_A L-lactate dehydrogenase 90.5 1.4 4.7E-05 48.4 11.6 71 180-273 2-76 (319)
158 2cvz_A Dehydrogenase, 3-hydrox 90.4 0.78 2.7E-05 48.8 9.4 87 576-707 2-91 (289)
159 3dtt_A NADP oxidoreductase; st 90.4 0.57 2E-05 49.2 8.1 39 173-212 14-52 (245)
160 3vku_A L-LDH, L-lactate dehydr 90.4 0.6 2.1E-05 51.7 8.6 75 574-683 8-85 (326)
161 1ff9_A Saccharopine reductase; 90.3 0.29 9.8E-06 56.6 6.2 33 575-613 3-35 (450)
162 3fwz_A Inner membrane protein 90.2 0.2 6.8E-06 47.9 4.0 86 575-695 7-92 (140)
163 2gn4_A FLAA1 protein, UDP-GLCN 90.2 1.5 5.3E-05 48.1 11.8 99 176-299 19-142 (344)
164 2rcy_A Pyrroline carboxylate r 90.1 0.33 1.1E-05 51.1 6.0 35 178-212 4-41 (262)
165 1o0s_A NAD-ME, NAD-dependent m 90.1 0.1 3.5E-06 61.4 2.2 61 555-615 282-365 (605)
166 3m2p_A UDP-N-acetylglucosamine 89.9 0.54 1.8E-05 50.5 7.6 33 575-613 2-35 (311)
167 3r6d_A NAD-dependent epimerase 89.9 0.55 1.9E-05 47.8 7.3 32 576-613 6-39 (221)
168 3fi9_A Malate dehydrogenase; s 89.8 0.52 1.8E-05 52.6 7.5 77 176-273 6-85 (343)
169 2dpo_A L-gulonate 3-dehydrogen 89.8 1 3.6E-05 49.5 9.9 36 176-212 4-39 (319)
170 3rkr_A Short chain oxidoreduct 89.8 0.26 9E-06 52.0 4.9 84 572-682 26-114 (262)
171 2pzm_A Putative nucleotide sug 89.8 1.2 4E-05 48.4 10.3 36 175-211 17-53 (330)
172 1y1p_A ARII, aldehyde reductas 89.7 2.8 9.4E-05 45.1 13.2 107 176-304 9-137 (342)
173 2pzm_A Putative nucleotide sug 89.7 0.45 1.5E-05 51.7 6.9 37 571-613 16-53 (330)
174 1ez4_A Lactate dehydrogenase; 89.7 1.3 4.4E-05 48.7 10.6 72 179-273 6-81 (318)
175 3l9w_A Glutathione-regulated p 89.7 0.6 2E-05 53.3 8.1 91 575-700 4-94 (413)
176 2hjr_A Malate dehydrogenase; m 89.7 0.73 2.5E-05 50.9 8.6 37 572-613 11-47 (328)
177 3vps_A TUNA, NAD-dependent epi 89.6 0.43 1.5E-05 51.0 6.6 37 572-614 4-41 (321)
178 3ius_A Uncharacterized conserv 89.6 0.64 2.2E-05 49.1 7.8 97 178-304 5-108 (286)
179 1ks9_A KPA reductase;, 2-dehyd 89.6 1.2 4E-05 47.3 9.8 83 180-285 2-84 (291)
180 3ioy_A Short-chain dehydrogena 89.6 0.45 1.5E-05 52.0 6.8 63 573-660 6-69 (319)
181 3p7m_A Malate dehydrogenase; p 89.5 0.52 1.8E-05 52.0 7.2 35 574-613 4-38 (321)
182 1t2d_A LDH-P, L-lactate dehydr 89.4 1.2 4.1E-05 49.1 10.1 72 179-272 5-80 (322)
183 2b69_A UDP-glucuronate decarbo 89.3 0.93 3.2E-05 49.3 9.1 37 571-613 23-60 (343)
184 3ggo_A Prephenate dehydrogenas 89.2 0.51 1.7E-05 51.8 6.8 35 575-613 33-67 (314)
185 1pj3_A NAD-dependent malic enz 89.2 0.099 3.4E-06 61.3 1.1 60 556-615 247-329 (564)
186 3kkj_A Amine oxidase, flavin-c 89.1 0.24 8.3E-06 49.5 3.9 33 575-613 2-34 (336)
187 3c85_A Putative glutathione-re 89.1 0.23 7.8E-06 49.4 3.7 36 573-614 37-73 (183)
188 3ggo_A Prephenate dehydrogenas 89.1 1.9 6.6E-05 47.1 11.4 82 178-286 33-116 (314)
189 2z1n_A Dehydrogenase; reductas 89.1 0.63 2.1E-05 48.9 7.2 35 573-613 5-40 (260)
190 3qvo_A NMRA family protein; st 89.1 0.85 2.9E-05 47.1 8.1 101 574-710 22-128 (236)
191 2bka_A CC3, TAT-interacting pr 89.1 1.3 4.5E-05 45.4 9.5 37 573-613 16-53 (242)
192 2bka_A CC3, TAT-interacting pr 89.0 2.5 8.5E-05 43.3 11.6 37 176-212 16-54 (242)
193 3i1j_A Oxidoreductase, short c 89.0 0.55 1.9E-05 48.7 6.6 36 572-613 11-47 (247)
194 2zyd_A 6-phosphogluconate dehy 89.0 0.83 2.9E-05 53.1 8.8 37 173-210 10-46 (480)
195 2f1k_A Prephenate dehydrogenas 89.0 1.7 5.8E-05 46.1 10.6 30 180-210 2-31 (279)
196 1gq2_A Malic enzyme; oxidoredu 89.0 0.098 3.4E-06 61.2 0.9 45 571-615 278-327 (555)
197 3evt_A Phosphoglycerate dehydr 89.0 0.32 1.1E-05 53.8 5.0 36 572-613 134-169 (324)
198 3qsg_A NAD-binding phosphogluc 89.0 0.83 2.8E-05 49.8 8.3 35 575-614 24-58 (312)
199 3ew7_A LMO0794 protein; Q8Y8U8 88.9 0.91 3.1E-05 45.6 8.1 32 576-613 1-33 (221)
200 3pqe_A L-LDH, L-lactate dehydr 88.9 0.64 2.2E-05 51.5 7.4 76 575-683 5-82 (326)
201 1sb8_A WBPP; epimerase, 4-epim 88.9 0.69 2.4E-05 50.6 7.6 35 573-613 25-60 (352)
202 3ko8_A NAD-dependent epimerase 88.9 0.87 3E-05 48.6 8.3 32 576-613 1-33 (312)
203 3sxp_A ADP-L-glycero-D-mannohe 88.8 1.9 6.5E-05 47.3 11.2 113 176-305 8-144 (362)
204 3r6d_A NAD-dependent epimerase 88.7 1.6 5.5E-05 44.3 9.8 97 179-303 6-112 (221)
205 3vps_A TUNA, NAD-dependent epi 88.7 1.1 3.6E-05 47.9 8.9 37 175-212 4-41 (321)
206 3u62_A Shikimate dehydrogenase 88.6 0.51 1.7E-05 50.3 6.1 35 573-613 107-141 (253)
207 2zqz_A L-LDH, L-lactate dehydr 88.6 1.5 5E-05 48.5 10.0 74 177-273 8-85 (326)
208 2g5c_A Prephenate dehydrogenas 88.6 2.8 9.5E-05 44.4 12.0 81 179-286 2-84 (281)
209 2ph5_A Homospermidine synthase 88.6 1.5 5E-05 51.0 10.2 91 178-296 13-112 (480)
210 3nep_X Malate dehydrogenase; h 88.6 1.4 4.8E-05 48.4 9.8 72 180-273 2-78 (314)
211 1nvt_A Shikimate 5'-dehydrogen 88.5 0.43 1.5E-05 51.5 5.5 75 175-273 125-202 (287)
212 1ldn_A L-lactate dehydrogenase 88.4 1.2 4.1E-05 48.8 9.2 35 575-613 6-40 (316)
213 2cvz_A Dehydrogenase, 3-hydrox 88.4 1.3 4.5E-05 47.0 9.3 66 179-276 2-67 (289)
214 3phh_A Shikimate dehydrogenase 88.4 0.75 2.6E-05 49.5 7.3 33 575-613 118-150 (269)
215 3c24_A Putative oxidoreductase 88.3 1.5 5.3E-05 46.8 9.8 75 179-284 12-87 (286)
216 2x0j_A Malate dehydrogenase; o 88.3 1.4 4.7E-05 48.1 9.4 32 576-611 1-32 (294)
217 3lk7_A UDP-N-acetylmuramoylala 88.3 0.86 2.9E-05 52.4 8.2 92 176-295 7-100 (451)
218 2h78_A Hibadh, 3-hydroxyisobut 88.3 0.85 2.9E-05 49.1 7.8 32 179-211 4-35 (302)
219 2ew2_A 2-dehydropantoate 2-red 88.3 1.7 5.8E-05 46.4 10.1 32 179-211 4-35 (316)
220 2d5c_A AROE, shikimate 5-dehyd 88.2 1 3.6E-05 47.6 8.3 34 573-613 115-148 (263)
221 3tsc_A Putative oxidoreductase 88.2 0.78 2.7E-05 48.7 7.3 97 572-682 8-109 (277)
222 1lnq_A MTHK channels, potassiu 88.2 0.37 1.3E-05 52.9 4.9 88 178-295 115-208 (336)
223 1bg6_A N-(1-D-carboxylethyl)-L 88.2 1.3 4.5E-05 48.5 9.4 33 178-211 4-36 (359)
224 1x7d_A Ornithine cyclodeaminas 88.2 1.1 3.7E-05 50.1 8.6 77 176-274 127-204 (350)
225 1sby_A Alcohol dehydrogenase; 88.1 0.81 2.8E-05 47.7 7.3 84 573-682 3-92 (254)
226 1x7d_A Ornithine cyclodeaminas 88.1 0.5 1.7E-05 52.8 5.9 142 502-684 54-204 (350)
227 3lyl_A 3-oxoacyl-(acyl-carrier 88.1 0.54 1.8E-05 48.8 5.8 35 573-613 3-38 (247)
228 2d5c_A AROE, shikimate 5-dehyd 88.1 0.95 3.3E-05 48.0 7.9 34 176-211 115-148 (263)
229 3tjr_A Short chain dehydrogena 88.1 0.74 2.5E-05 49.7 7.1 83 573-682 29-116 (301)
230 2xxj_A L-LDH, L-lactate dehydr 88.1 1.3 4.5E-05 48.4 9.1 72 179-273 1-76 (310)
231 1sb8_A WBPP; epimerase, 4-epim 88.0 2.5 8.5E-05 46.1 11.4 109 176-304 25-158 (352)
232 2x6t_A ADP-L-glycero-D-manno-h 88.0 1.2 4E-05 48.8 8.8 39 173-211 41-80 (357)
233 2q1s_A Putative nucleotide sug 88.0 2.6 8.7E-05 46.6 11.6 102 176-305 30-157 (377)
234 2d4a_B Malate dehydrogenase; a 87.9 1.2 4E-05 48.9 8.6 32 577-613 1-32 (308)
235 3nzo_A UDP-N-acetylglucosamine 87.9 4.2 0.00014 45.7 13.5 105 174-299 31-165 (399)
236 3h7a_A Short chain dehydrogena 87.9 0.74 2.5E-05 48.3 6.8 35 573-613 5-40 (252)
237 3t4x_A Oxidoreductase, short c 87.9 1.4 4.8E-05 46.5 9.0 63 176-258 8-71 (267)
238 1xg5_A ARPG836; short chain de 87.8 1.8 6.2E-05 45.7 9.9 35 175-210 29-64 (279)
239 1vkn_A N-acetyl-gamma-glutamyl 87.8 0.75 2.6E-05 51.4 7.0 93 576-706 14-107 (351)
240 2x4g_A Nucleoside-diphosphate- 87.7 2.3 7.7E-05 45.9 10.8 95 180-304 15-131 (342)
241 4gwg_A 6-phosphogluconate dehy 87.7 0.75 2.6E-05 53.6 7.2 118 178-301 4-131 (484)
242 3gaf_A 7-alpha-hydroxysteroid 87.7 0.51 1.8E-05 49.6 5.4 83 573-682 10-97 (256)
243 3nyw_A Putative oxidoreductase 87.7 1.5 5.2E-05 45.9 9.0 63 175-257 4-68 (250)
244 3ucx_A Short chain dehydrogena 87.7 0.79 2.7E-05 48.3 6.9 36 572-613 8-44 (264)
245 3doj_A AT3G25530, dehydrogenas 87.6 0.96 3.3E-05 49.2 7.7 38 175-213 18-55 (310)
246 4gx0_A TRKA domain protein; me 87.6 0.92 3.2E-05 53.5 8.1 85 179-295 349-439 (565)
247 2iz1_A 6-phosphogluconate dehy 87.6 1.6 5.4E-05 50.7 9.9 33 177-210 4-36 (474)
248 1xu9_A Corticosteroid 11-beta- 87.5 0.86 2.9E-05 48.5 7.1 36 572-613 25-61 (286)
249 3pgx_A Carveol dehydrogenase; 87.5 0.93 3.2E-05 48.2 7.4 97 572-682 12-113 (280)
250 3sxp_A ADP-L-glycero-D-mannohe 87.5 1 3.5E-05 49.4 8.0 35 573-613 8-45 (362)
251 1yb1_A 17-beta-hydroxysteroid 87.5 0.66 2.3E-05 49.1 6.2 35 573-613 29-64 (272)
252 2pv7_A T-protein [includes: ch 87.5 1 3.5E-05 48.7 7.8 34 575-614 21-55 (298)
253 1np3_A Ketol-acid reductoisome 87.4 1.2 4.2E-05 49.1 8.6 79 174-282 12-90 (338)
254 1guz_A Malate dehydrogenase; o 87.4 3.7 0.00013 44.7 12.2 72 180-273 2-78 (310)
255 1zcj_A Peroxisomal bifunctiona 87.4 3.6 0.00012 47.5 12.7 32 179-211 38-69 (463)
256 1oju_A MDH, malate dehydrogena 87.4 1.3 4.5E-05 48.1 8.6 34 576-613 1-34 (294)
257 3svt_A Short-chain type dehydr 87.3 1.1 3.6E-05 47.7 7.7 65 571-660 7-73 (281)
258 3uve_A Carveol dehydrogenase ( 87.3 0.99 3.4E-05 48.1 7.5 36 572-613 8-44 (286)
259 2pv7_A T-protein [includes: ch 87.3 0.87 3E-05 49.3 7.1 32 179-211 22-54 (298)
260 3rft_A Uronate dehydrogenase; 87.3 0.6 2E-05 49.3 5.6 34 575-614 3-37 (267)
261 1p9l_A Dihydrodipicolinate red 87.2 1.1 3.9E-05 47.4 7.7 101 180-306 2-111 (245)
262 2vhw_A Alanine dehydrogenase; 87.2 0.67 2.3E-05 52.1 6.3 36 175-211 165-200 (377)
263 2x4g_A Nucleoside-diphosphate- 87.2 1.1 3.7E-05 48.5 7.8 32 576-613 14-46 (342)
264 3nzo_A UDP-N-acetylglucosamine 87.1 1.6 5.6E-05 49.0 9.5 89 568-683 28-121 (399)
265 4huj_A Uncharacterized protein 87.1 1.1 3.8E-05 46.2 7.4 31 576-612 24-55 (220)
266 3kkj_A Amine oxidase, flavin-c 87.1 0.48 1.6E-05 47.3 4.5 33 178-211 2-34 (336)
267 3e48_A Putative nucleoside-dip 87.1 2.9 9.9E-05 44.1 10.9 93 180-301 2-108 (289)
268 3gt0_A Pyrroline-5-carboxylate 87.0 0.51 1.8E-05 49.5 4.9 35 576-612 3-37 (247)
269 3sju_A Keto reductase; short-c 87.0 0.74 2.5E-05 49.1 6.2 84 572-682 21-109 (279)
270 1lu9_A Methylene tetrahydromet 87.0 1.2 4E-05 47.9 7.9 34 176-210 117-151 (287)
271 3fbt_A Chorismate mutase and s 87.0 0.51 1.7E-05 51.2 5.0 36 176-211 120-155 (282)
272 2v6b_A L-LDH, L-lactate dehydr 87.0 1.6 5.5E-05 47.5 9.0 34 576-613 1-34 (304)
273 3o38_A Short chain dehydrogena 86.9 1.6 5.6E-05 45.7 8.8 35 175-210 19-55 (266)
274 1oaa_A Sepiapterin reductase; 86.9 0.76 2.6E-05 48.1 6.2 64 573-661 4-71 (259)
275 3i6i_A Putative leucoanthocyan 86.9 1.3 4.4E-05 48.3 8.3 92 176-289 8-110 (346)
276 1gee_A Glucose 1-dehydrogenase 86.9 0.91 3.1E-05 47.3 6.8 35 572-612 4-39 (261)
277 1vl6_A Malate oxidoreductase; 86.9 0.35 1.2E-05 54.7 3.6 37 572-613 189-225 (388)
278 3g0o_A 3-hydroxyisobutyrate de 86.8 1.5 5E-05 47.5 8.6 94 177-299 6-103 (303)
279 4dll_A 2-hydroxy-3-oxopropiona 86.8 0.54 1.8E-05 51.5 5.1 38 174-212 27-64 (320)
280 1pzg_A LDH, lactate dehydrogen 86.8 2.1 7.1E-05 47.3 9.8 73 179-272 10-86 (331)
281 3tox_A Short chain dehydrogena 86.7 0.61 2.1E-05 49.9 5.4 36 572-613 5-41 (280)
282 3pef_A 6-phosphogluconate dehy 86.7 0.89 3.1E-05 48.7 6.7 34 179-213 2-35 (287)
283 3i6i_A Putative leucoanthocyan 86.7 1.6 5.4E-05 47.6 8.8 102 573-703 8-115 (346)
284 2ywl_A Thioredoxin reductase r 86.7 0.43 1.5E-05 46.9 3.9 32 577-614 3-34 (180)
285 3tfo_A Putative 3-oxoacyl-(acy 86.6 0.5 1.7E-05 50.3 4.6 82 574-682 3-89 (264)
286 1vl6_A Malate oxidoreductase; 86.6 0.6 2E-05 52.8 5.4 37 175-211 189-225 (388)
287 3awd_A GOX2181, putative polyo 86.6 0.75 2.6E-05 47.8 5.9 35 573-613 11-46 (260)
288 3pk0_A Short-chain dehydrogena 86.6 0.78 2.7E-05 48.4 6.1 85 572-682 7-96 (262)
289 3b1f_A Putative prephenate deh 86.6 2.6 9E-05 44.8 10.3 82 177-285 5-87 (290)
290 3u62_A Shikimate dehydrogenase 86.5 0.41 1.4E-05 51.0 3.9 36 176-212 107-142 (253)
291 1y6j_A L-lactate dehydrogenase 86.5 1.1 3.6E-05 49.4 7.3 73 178-273 7-83 (318)
292 3pdu_A 3-hydroxyisobutyrate de 86.5 0.9 3.1E-05 48.6 6.6 33 179-212 2-34 (287)
293 3nv9_A Malic enzyme; rossmann 86.5 0.18 6.3E-06 57.9 1.1 42 571-615 215-256 (487)
294 2c5a_A GDP-mannose-3', 5'-epim 86.5 3 0.0001 46.2 11.0 33 179-212 30-63 (379)
295 1t2d_A LDH-P, L-lactate dehydr 86.5 1.7 5.8E-05 47.8 8.9 33 576-613 5-37 (322)
296 2ae2_A Protein (tropinone redu 86.4 1.3 4.6E-05 46.3 7.8 35 573-613 7-42 (260)
297 2z1m_A GDP-D-mannose dehydrata 86.4 1.7 5.7E-05 46.8 8.8 35 176-211 1-36 (345)
298 2zat_A Dehydrogenase/reductase 86.4 0.68 2.3E-05 48.6 5.5 36 572-613 11-47 (260)
299 2i99_A MU-crystallin homolog; 86.4 0.75 2.6E-05 50.3 6.0 36 175-210 132-168 (312)
300 3lf2_A Short chain oxidoreduct 86.3 2.6 9E-05 44.3 10.0 62 176-257 6-68 (265)
301 3afn_B Carbonyl reductase; alp 86.3 1.1 3.7E-05 46.4 6.9 35 573-613 5-40 (258)
302 3enk_A UDP-glucose 4-epimerase 86.2 0.9 3.1E-05 49.1 6.5 33 575-613 5-38 (341)
303 1jay_A Coenzyme F420H2:NADP+ o 86.2 3.2 0.00011 41.8 10.3 30 180-210 2-32 (212)
304 1ez4_A Lactate dehydrogenase; 86.2 1.9 6.7E-05 47.3 9.2 74 575-683 5-81 (318)
305 2izz_A Pyrroline-5-carboxylate 86.1 0.9 3.1E-05 49.8 6.4 80 178-284 22-104 (322)
306 3v2g_A 3-oxoacyl-[acyl-carrier 86.1 1.2 4E-05 47.4 7.2 35 572-612 28-63 (271)
307 1fmc_A 7 alpha-hydroxysteroid 86.1 0.8 2.8E-05 47.4 5.8 34 573-612 9-43 (255)
308 2dc1_A L-aspartate dehydrogena 86.1 1.4 4.6E-05 46.0 7.5 31 577-613 2-33 (236)
309 4fn4_A Short chain dehydrogena 86.1 0.92 3.2E-05 48.3 6.3 83 572-681 4-91 (254)
310 4gx0_A TRKA domain protein; me 86.0 1.3 4.6E-05 52.1 8.3 87 576-701 349-435 (565)
311 4ibo_A Gluconate dehydrogenase 86.0 0.75 2.6E-05 48.9 5.6 36 572-613 23-59 (271)
312 3v2h_A D-beta-hydroxybutyrate 85.9 1.2 4.1E-05 47.6 7.2 36 571-612 21-57 (281)
313 2bll_A Protein YFBG; decarboxy 85.9 1.3 4.3E-05 47.9 7.5 32 576-613 1-34 (345)
314 3ko8_A NAD-dependent epimerase 85.9 2.9 9.9E-05 44.5 10.2 31 180-211 2-33 (312)
315 3l6d_A Putative oxidoreductase 85.8 0.56 1.9E-05 51.0 4.6 34 178-212 9-42 (306)
316 4e21_A 6-phosphogluconate dehy 85.8 0.72 2.4E-05 51.7 5.5 37 572-614 19-55 (358)
317 2jah_A Clavulanic acid dehydro 85.8 0.89 3.1E-05 47.4 6.0 35 573-613 5-40 (247)
318 1pjc_A Protein (L-alanine dehy 85.8 1.1 3.9E-05 49.9 7.2 35 176-211 165-199 (361)
319 1yxm_A Pecra, peroxisomal tran 85.8 1 3.5E-05 48.2 6.5 36 572-613 15-51 (303)
320 1zem_A Xylitol dehydrogenase; 85.7 1.2 4.1E-05 46.8 7.0 36 572-613 4-40 (262)
321 3ew7_A LMO0794 protein; Q8Y8U8 85.7 1.2 4.1E-05 44.7 6.7 92 180-301 2-105 (221)
322 2q1s_A Putative nucleotide sug 85.7 1.8 6E-05 47.9 8.7 37 572-613 29-66 (377)
323 2a9f_A Putative malic enzyme ( 85.7 0.44 1.5E-05 54.0 3.6 38 572-614 185-222 (398)
324 3enk_A UDP-glucose 4-epimerase 85.7 3.3 0.00011 44.7 10.6 105 178-304 5-134 (341)
325 3r1i_A Short-chain type dehydr 85.6 0.94 3.2E-05 48.3 6.2 36 572-613 29-65 (276)
326 3dtt_A NADP oxidoreductase; st 85.6 0.54 1.8E-05 49.4 4.2 38 570-613 14-51 (245)
327 3cky_A 2-hydroxymethyl glutara 85.6 1.4 4.7E-05 47.3 7.5 93 177-299 3-99 (301)
328 3ado_A Lambda-crystallin; L-gu 85.6 2.9 9.9E-05 46.1 10.1 111 177-302 5-126 (319)
329 2axq_A Saccharopine dehydrogen 85.6 1.3 4.3E-05 51.5 7.6 37 175-211 20-56 (467)
330 4egf_A L-xylulose reductase; s 85.5 0.95 3.2E-05 47.8 6.0 36 572-613 17-53 (266)
331 4da9_A Short-chain dehydrogena 85.5 1.2 4.3E-05 47.4 7.0 85 572-682 26-115 (280)
332 1i36_A Conserved hypothetical 85.4 2.3 7.9E-05 44.6 9.0 30 180-210 2-31 (264)
333 3rkr_A Short chain oxidoreduct 85.4 1.8 6.1E-05 45.5 8.1 37 173-210 24-61 (262)
334 3cxt_A Dehydrogenase with diff 85.4 1 3.5E-05 48.4 6.4 36 572-613 31-67 (291)
335 4dqv_A Probable peptide synthe 85.4 4.1 0.00014 46.9 11.9 121 176-304 71-219 (478)
336 4iin_A 3-ketoacyl-acyl carrier 85.4 0.56 1.9E-05 49.7 4.2 35 572-612 26-61 (271)
337 3k6j_A Protein F01G10.3, confi 85.3 4.7 0.00016 46.7 12.1 33 179-212 55-87 (460)
338 2gdz_A NAD+-dependent 15-hydro 85.3 0.76 2.6E-05 48.4 5.2 35 573-613 5-40 (267)
339 3hg7_A D-isomer specific 2-hyd 85.3 1.2 4E-05 49.3 6.8 44 168-212 130-173 (324)
340 4hb9_A Similarities with proba 85.2 0.54 1.9E-05 51.9 4.2 34 575-614 1-34 (412)
341 3hn2_A 2-dehydropantoate 2-red 85.2 0.59 2E-05 50.9 4.4 33 575-613 2-34 (312)
342 3u9l_A 3-oxoacyl-[acyl-carrier 85.2 1.2 4.3E-05 48.7 7.0 89 573-683 3-96 (324)
343 3tl2_A Malate dehydrogenase; c 85.2 1.4 5E-05 48.3 7.5 35 574-613 7-41 (315)
344 2qq5_A DHRS1, dehydrogenase/re 85.2 0.74 2.5E-05 48.3 5.0 35 573-613 3-38 (260)
345 1iy8_A Levodione reductase; ox 85.1 3.3 0.00011 43.5 10.0 63 175-257 10-73 (267)
346 1omo_A Alanine dehydrogenase; 85.0 2.4 8.2E-05 46.6 9.2 73 177-274 124-197 (322)
347 2gn4_A FLAA1 protein, UDP-GLCN 85.0 1.2 4.2E-05 48.9 6.9 80 573-683 19-100 (344)
348 2q1w_A Putative nucleotide sug 85.0 3.7 0.00013 44.4 10.7 36 175-211 18-54 (333)
349 3mog_A Probable 3-hydroxybutyr 85.0 4.2 0.00014 47.3 11.7 35 177-212 4-38 (483)
350 4imr_A 3-oxoacyl-(acyl-carrier 85.0 1.3 4.6E-05 47.1 7.0 40 568-613 26-66 (275)
351 3eag_A UDP-N-acetylmuramate:L- 85.0 2.7 9.2E-05 46.1 9.6 87 179-296 5-95 (326)
352 3svt_A Short-chain type dehydr 85.0 3 0.0001 44.2 9.7 35 175-210 8-43 (281)
353 2eez_A Alanine dehydrogenase; 84.9 1.2 4E-05 49.9 6.8 35 175-210 163-197 (369)
354 2xxj_A L-LDH, L-lactate dehydr 84.9 1.8 6.3E-05 47.3 8.2 73 576-683 1-76 (310)
355 1a5z_A L-lactate dehydrogenase 84.8 2.1 7E-05 46.9 8.5 34 576-613 1-34 (319)
356 1ur5_A Malate dehydrogenase; o 84.8 2.5 8.6E-05 46.1 9.2 33 576-613 3-35 (309)
357 3i83_A 2-dehydropantoate 2-red 84.8 0.59 2E-05 51.1 4.2 34 575-614 2-35 (320)
358 3doj_A AT3G25530, dehydrogenas 84.8 0.47 1.6E-05 51.7 3.4 34 575-614 21-54 (310)
359 4dqv_A Probable peptide synthe 84.8 1.6 5.6E-05 50.3 8.1 34 574-613 72-109 (478)
360 3k96_A Glycerol-3-phosphate de 84.8 2.3 8E-05 47.4 9.1 33 178-211 29-61 (356)
361 3gvx_A Glycerate dehydrogenase 84.8 0.41 1.4E-05 52.1 2.8 44 168-212 112-155 (290)
362 3ego_A Probable 2-dehydropanto 84.7 1.1 3.9E-05 48.6 6.4 30 179-210 3-32 (307)
363 3qha_A Putative oxidoreductase 84.7 0.67 2.3E-05 50.1 4.5 34 178-212 15-48 (296)
364 1rkx_A CDP-glucose-4,6-dehydra 84.7 5.1 0.00018 43.5 11.7 36 175-211 6-42 (357)
365 3s55_A Putative short-chain de 84.6 3.8 0.00013 43.3 10.4 41 170-211 2-43 (281)
366 1sby_A Alcohol dehydrogenase; 84.6 3 0.0001 43.3 9.4 35 176-210 3-38 (254)
367 2a9f_A Putative malic enzyme ( 84.6 0.86 3E-05 51.6 5.4 38 175-212 185-222 (398)
368 3d0o_A L-LDH 1, L-lactate dehy 84.6 2.1 7.1E-05 46.9 8.4 37 573-613 4-40 (317)
369 1wma_A Carbonyl reductase [NAD 84.5 0.92 3.2E-05 47.2 5.4 33 575-613 4-38 (276)
370 4iiu_A 3-oxoacyl-[acyl-carrier 84.4 0.92 3.1E-05 47.8 5.3 30 570-599 21-51 (267)
371 3l77_A Short-chain alcohol deh 84.3 1.8 6.2E-05 44.4 7.4 33 575-613 2-35 (235)
372 3nep_X Malate dehydrogenase; h 84.2 2 6.8E-05 47.2 8.0 34 576-613 1-34 (314)
373 3qlj_A Short chain dehydrogena 84.2 1 3.5E-05 49.1 5.7 73 571-660 23-96 (322)
374 3imf_A Short chain dehydrogena 84.1 0.69 2.4E-05 48.6 4.2 36 572-613 3-39 (257)
375 3qiv_A Short-chain dehydrogena 84.1 3.4 0.00012 42.7 9.6 35 175-210 6-41 (253)
376 3gt0_A Pyrroline-5-carboxylate 84.1 1.1 3.6E-05 47.0 5.6 32 179-210 3-37 (247)
377 2qyt_A 2-dehydropantoate 2-red 84.1 1.5 5.3E-05 47.0 7.0 31 180-210 10-45 (317)
378 1orr_A CDP-tyvelose-2-epimeras 84.1 4.3 0.00015 43.7 10.7 104 179-304 2-130 (347)
379 3v8b_A Putative dehydrogenase, 84.0 1.2 4E-05 47.8 6.0 36 572-613 25-61 (283)
380 1omo_A Alanine dehydrogenase; 84.0 1.4 4.9E-05 48.4 6.8 73 574-684 124-197 (322)
381 2ydy_A Methionine adenosyltran 84.0 2.1 7.3E-05 45.7 8.1 32 178-210 2-34 (315)
382 2dc1_A L-aspartate dehydrogena 84.0 3 0.0001 43.3 8.9 32 180-211 2-33 (236)
383 3ftp_A 3-oxoacyl-[acyl-carrier 84.0 1 3.4E-05 47.9 5.4 36 572-613 25-61 (270)
384 3pxx_A Carveol dehydrogenase; 83.9 2.6 8.8E-05 44.5 8.6 93 169-271 1-106 (287)
385 1ek6_A UDP-galactose 4-epimera 83.9 4.2 0.00014 43.9 10.6 109 178-304 2-137 (348)
386 3ksu_A 3-oxoacyl-acyl carrier 83.9 1.4 4.8E-05 46.4 6.5 86 573-682 9-99 (262)
387 3qlj_A Short chain dehydrogena 83.9 2.4 8.2E-05 46.1 8.5 77 169-257 18-95 (322)
388 1rkx_A CDP-glucose-4,6-dehydra 83.9 3.4 0.00012 44.9 9.9 37 571-613 5-42 (357)
389 4fc7_A Peroxisomal 2,4-dienoyl 83.8 1.4 4.8E-05 46.8 6.5 36 572-613 24-60 (277)
390 1o6z_A MDH, malate dehydrogena 83.8 3.3 0.00011 45.0 9.6 73 180-273 2-79 (303)
391 3pp8_A Glyoxylate/hydroxypyruv 83.8 1.2 4.1E-05 49.0 6.1 51 161-212 120-172 (315)
392 3rft_A Uronate dehydrogenase; 83.8 1.5 5.3E-05 46.0 6.8 35 177-212 2-37 (267)
393 3hhp_A Malate dehydrogenase; M 83.8 3.1 0.0001 45.7 9.3 74 180-273 2-78 (312)
394 2zqz_A L-LDH, L-lactate dehydr 83.7 2.3 8E-05 46.8 8.4 74 575-683 9-85 (326)
395 1spx_A Short-chain reductase f 83.7 1.2 4E-05 47.1 5.8 35 573-613 4-39 (278)
396 4e12_A Diketoreductase; oxidor 83.7 0.72 2.5E-05 49.5 4.1 33 576-614 5-37 (283)
397 3ehe_A UDP-glucose 4-epimerase 83.6 3.4 0.00012 44.0 9.5 29 179-209 2-31 (313)
398 1nyt_A Shikimate 5-dehydrogena 83.6 0.95 3.2E-05 48.4 5.0 34 176-210 117-150 (271)
399 2c5a_A GDP-mannose-3', 5'-epim 83.6 1.7 5.7E-05 48.2 7.2 33 575-613 29-62 (379)
400 3h2s_A Putative NADH-flavin re 83.6 1.7 5.7E-05 43.9 6.7 92 180-302 2-108 (224)
401 3ioy_A Short-chain dehydrogena 83.5 1.9 6.5E-05 47.0 7.5 64 175-258 5-69 (319)
402 3hdj_A Probable ornithine cycl 83.4 2 6.7E-05 47.2 7.6 73 177-274 120-193 (313)
403 1npy_A Hypothetical shikimate 83.4 0.87 3E-05 49.0 4.7 34 574-612 118-151 (271)
404 2hk9_A Shikimate dehydrogenase 83.4 0.76 2.6E-05 49.2 4.2 36 572-613 126-161 (275)
405 2nwq_A Probable short-chain de 83.4 1.5 5E-05 46.8 6.4 36 571-613 18-54 (272)
406 4f6c_A AUSA reductase domain p 83.3 2 6.9E-05 48.4 7.9 112 575-713 69-202 (427)
407 2hun_A 336AA long hypothetical 83.3 6.5 0.00022 42.1 11.7 35 177-211 2-38 (336)
408 3p2y_A Alanine dehydrogenase/p 83.3 1.2 3.9E-05 50.4 5.7 71 501-614 147-217 (381)
409 1ja9_A 4HNR, 1,3,6,8-tetrahydr 83.3 1.1 3.7E-05 47.0 5.3 34 573-612 19-53 (274)
410 3f9i_A 3-oxoacyl-[acyl-carrier 83.3 1.1 3.8E-05 46.4 5.3 36 572-613 11-47 (249)
411 1gpj_A Glutamyl-tRNA reductase 83.3 0.99 3.4E-05 51.2 5.3 35 176-210 165-199 (404)
412 1txg_A Glycerol-3-phosphate de 83.3 3.2 0.00011 44.9 9.2 93 180-297 2-103 (335)
413 3gg2_A Sugar dehydrogenase, UD 83.2 3.7 0.00013 47.2 10.1 34 179-213 3-36 (450)
414 1vpd_A Tartronate semialdehyde 83.2 1.7 5.9E-05 46.4 6.9 90 180-299 7-100 (299)
415 2uvd_A 3-oxoacyl-(acyl-carrier 83.2 1.4 4.7E-05 45.8 6.0 34 573-612 2-36 (246)
416 2hq1_A Glucose/ribitol dehydro 83.1 1.7 5.6E-05 44.8 6.6 33 573-611 3-36 (247)
417 3un1_A Probable oxidoreductase 83.1 1.7 6E-05 45.7 6.8 79 571-657 24-104 (260)
418 4dyv_A Short-chain dehydrogena 83.1 1.2 4.1E-05 47.4 5.6 37 571-613 24-61 (272)
419 4aj2_A L-lactate dehydrogenase 83.1 2.2 7.5E-05 47.3 7.8 77 572-682 16-95 (331)
420 1z82_A Glycerol-3-phosphate de 83.1 1.6 5.6E-05 47.7 6.8 88 180-297 16-110 (335)
421 3ghy_A Ketopantoate reductase 83.1 0.64 2.2E-05 51.1 3.5 32 575-612 3-34 (335)
422 1a4i_A Methylenetetrahydrofola 83.0 1.2 4.2E-05 48.5 5.7 34 572-611 162-196 (301)
423 3ehe_A UDP-glucose 4-epimerase 83.0 2.3 8E-05 45.4 7.9 23 576-598 2-25 (313)
424 3ldh_A Lactate dehydrogenase; 83.0 3.1 0.00011 46.0 9.0 34 575-612 21-54 (330)
425 2aef_A Calcium-gated potassium 83.0 2.3 7.9E-05 43.8 7.6 89 575-700 9-97 (234)
426 1ae1_A Tropinone reductase-I; 83.0 1.5 5E-05 46.5 6.2 35 573-613 19-54 (273)
427 2i6t_A Ubiquitin-conjugating e 83.0 4.2 0.00014 44.3 10.0 33 179-211 15-48 (303)
428 1geg_A Acetoin reductase; SDR 83.0 2.1 7.1E-05 44.7 7.3 33 575-613 2-35 (256)
429 3evt_A Phosphoglycerate dehydr 82.9 1.3 4.3E-05 49.1 5.8 44 168-212 126-170 (324)
430 4g65_A TRK system potassium up 82.9 4.3 0.00015 46.9 10.5 94 177-299 234-333 (461)
431 1xq1_A Putative tropinone redu 82.9 1 3.5E-05 47.2 4.9 35 573-613 12-47 (266)
432 1nyt_A Shikimate 5-dehydrogena 82.8 0.76 2.6E-05 49.2 3.9 35 573-613 117-151 (271)
433 1lld_A L-lactate dehydrogenase 82.7 0.86 2.9E-05 49.5 4.4 35 575-613 7-41 (319)
434 3i1j_A Oxidoreductase, short c 82.7 3.8 0.00013 42.2 9.1 35 175-210 11-46 (247)
435 1f0y_A HCDH, L-3-hydroxyacyl-C 82.7 0.81 2.8E-05 49.4 4.1 32 576-613 16-47 (302)
436 4b1b_A TRXR, thioredoxin reduc 82.6 0.76 2.6E-05 54.3 4.1 32 180-212 44-75 (542)
437 1gpj_A Glutamyl-tRNA reductase 82.6 0.74 2.5E-05 52.3 3.9 35 573-612 165-199 (404)
438 1s6y_A 6-phospho-beta-glucosid 82.6 3.4 0.00012 47.7 9.4 97 172-289 3-110 (450)
439 1g0o_A Trihydroxynaphthalene r 82.5 1.2 4E-05 47.5 5.2 35 573-613 27-62 (283)
440 2hun_A 336AA long hypothetical 82.5 1.8 6.1E-05 46.7 6.8 35 575-613 3-38 (336)
441 2c07_A 3-oxoacyl-(acyl-carrier 82.4 1.2 4.3E-05 47.3 5.4 34 573-612 42-76 (285)
442 3g17_A Similar to 2-dehydropan 82.4 0.65 2.2E-05 50.1 3.2 33 575-613 2-34 (294)
443 4huj_A Uncharacterized protein 82.4 0.59 2E-05 48.2 2.8 31 179-210 24-55 (220)
444 3osu_A 3-oxoacyl-[acyl-carrier 82.4 1.6 5.5E-05 45.4 6.1 33 574-612 3-36 (246)
445 3e03_A Short chain dehydrogena 82.4 2.2 7.5E-05 45.2 7.3 36 573-614 4-40 (274)
446 2dvm_A Malic enzyme, 439AA lon 82.3 0.87 3E-05 52.4 4.3 35 175-209 183-219 (439)
447 1ks9_A KPA reductase;, 2-dehyd 82.1 0.9 3.1E-05 48.1 4.1 32 577-614 2-33 (291)
448 1p77_A Shikimate 5-dehydrogena 82.1 0.92 3.1E-05 48.6 4.2 71 176-273 117-189 (272)
449 3oh8_A Nucleoside-diphosphate 82.0 6.7 0.00023 45.6 11.8 34 178-212 147-181 (516)
450 3fef_A Putative glucosidase LP 82.0 1.3 4.5E-05 51.1 5.7 105 573-712 3-115 (450)
451 3d4o_A Dipicolinate synthase s 81.9 1.3 4.3E-05 47.9 5.2 36 175-211 152-187 (293)
452 3sc6_A DTDP-4-dehydrorhamnose 81.9 4.6 0.00016 42.4 9.6 103 180-304 7-111 (287)
453 3ftp_A 3-oxoacyl-[acyl-carrier 81.9 2.4 8.3E-05 44.9 7.4 50 160-210 8-60 (270)
454 1eq2_A ADP-L-glycero-D-mannohe 81.8 3.1 0.00011 44.0 8.3 32 180-211 1-33 (310)
455 1dih_A Dihydrodipicolinate red 81.8 2.2 7.6E-05 45.9 7.1 100 574-710 4-106 (273)
456 3sc4_A Short chain dehydrogena 81.8 4.8 0.00017 42.8 9.8 67 176-257 7-74 (285)
457 3ego_A Probable 2-dehydropanto 81.8 0.9 3.1E-05 49.4 4.0 32 575-613 2-33 (307)
458 1y81_A Conserved hypothetical 81.8 1.4 4.8E-05 42.4 5.0 41 171-212 7-51 (138)
459 3d4o_A Dipicolinate synthase s 81.7 0.88 3E-05 49.2 3.9 35 573-613 153-187 (293)
460 1bg6_A N-(1-D-carboxylethyl)-L 81.6 0.94 3.2E-05 49.7 4.2 33 575-613 4-36 (359)
461 3pk0_A Short-chain dehydrogena 81.5 1.9 6.6E-05 45.3 6.4 37 173-210 5-42 (262)
462 2cul_A Glucose-inhibited divis 81.5 0.97 3.3E-05 46.7 4.0 33 575-613 3-35 (232)
463 2j6i_A Formate dehydrogenase; 81.5 1.6 5.3E-05 49.0 6.0 37 175-211 161-197 (364)
464 4a26_A Putative C-1-tetrahydro 81.4 1.3 4.5E-05 48.4 5.0 35 572-612 162-197 (300)
465 3obb_A Probable 3-hydroxyisobu 81.3 3.6 0.00012 44.8 8.6 32 576-613 4-35 (300)
466 2ew2_A 2-dehydropantoate 2-red 81.3 0.98 3.4E-05 48.4 4.1 32 576-613 4-35 (316)
467 2rir_A Dipicolinate synthase, 81.3 0.91 3.1E-05 49.2 3.9 35 573-613 155-189 (300)
468 3tsc_A Putative oxidoreductase 81.2 7.7 0.00026 40.9 11.1 36 175-211 8-44 (277)
469 3o26_A Salutaridine reductase; 81.2 3.9 0.00013 43.3 8.8 35 175-210 9-44 (311)
470 3ngx_A Bifunctional protein fo 81.2 1.1 3.9E-05 48.2 4.5 33 573-611 148-181 (276)
471 3is3_A 17BETA-hydroxysteroid d 81.2 1.1 3.8E-05 47.3 4.4 35 572-612 15-50 (270)
472 1vl0_A DTDP-4-dehydrorhamnose 81.1 4.1 0.00014 42.9 8.8 36 175-211 9-45 (292)
473 2ewd_A Lactate dehydrogenase,; 81.0 0.99 3.4E-05 49.3 4.1 35 575-614 4-38 (317)
474 2rir_A Dipicolinate synthase, 80.9 1.4 4.8E-05 47.7 5.2 36 175-211 154-189 (300)
475 3ucx_A Short chain dehydrogena 80.9 5.2 0.00018 41.9 9.5 35 175-210 8-43 (264)
476 3p2o_A Bifunctional protein fo 80.9 1.7 5.8E-05 47.1 5.7 34 572-611 157-191 (285)
477 1hye_A L-lactate/malate dehydr 80.7 4.4 0.00015 44.2 9.1 76 180-273 2-83 (313)
478 3e48_A Putative nucleoside-dip 80.7 3.5 0.00012 43.4 8.2 95 577-707 2-106 (289)
479 2p4q_A 6-phosphogluconate dehy 80.7 10 0.00035 44.2 12.7 35 177-212 9-43 (497)
480 1oc2_A DTDP-glucose 4,6-dehydr 80.6 6 0.00021 42.7 10.2 102 179-304 5-130 (348)
481 1orr_A CDP-tyvelose-2-epimeras 80.6 2.2 7.6E-05 46.0 6.7 31 576-612 2-33 (347)
482 1np3_A Ketol-acid reductoisome 80.5 1.3 4.4E-05 49.0 4.8 37 571-613 12-48 (338)
483 1xu9_A Corticosteroid 11-beta- 80.5 5.9 0.0002 42.0 9.9 34 176-210 26-60 (286)
484 3hwr_A 2-dehydropantoate 2-red 80.4 3.2 0.00011 45.2 7.9 101 177-297 18-119 (318)
485 2nu8_A Succinyl-COA ligase [AD 80.4 5.5 0.00019 43.0 9.7 113 178-303 7-127 (288)
486 2dtx_A Glucose 1-dehydrogenase 80.3 3.2 0.00011 43.7 7.6 75 572-656 5-81 (264)
487 1u8x_X Maltose-6'-phosphate gl 80.3 4.9 0.00017 46.6 9.7 92 177-289 27-129 (472)
488 4fn4_A Short chain dehydrogena 80.3 6.6 0.00023 41.7 10.0 52 175-246 4-56 (254)
489 2q1w_A Putative nucleotide sug 80.3 2.5 8.4E-05 45.8 6.9 36 572-613 18-54 (333)
490 3oig_A Enoyl-[acyl-carrier-pro 80.2 2.9 0.0001 43.7 7.3 35 573-613 5-42 (266)
491 2jl1_A Triphenylmethane reduct 80.2 2.4 8.1E-05 44.5 6.6 93 180-302 2-110 (287)
492 3st7_A Capsular polysaccharide 80.2 1.6 5.4E-05 48.1 5.4 33 576-613 1-34 (369)
493 3sc4_A Short chain dehydrogena 80.2 2.6 9E-05 44.9 7.0 91 572-682 6-101 (285)
494 4dio_A NAD(P) transhydrogenase 80.1 1.7 5.7E-05 49.5 5.6 70 502-614 154-223 (405)
495 4dgs_A Dehydrogenase; structur 80.1 1.2 4.2E-05 49.5 4.4 38 174-212 167-204 (340)
496 1b0a_A Protein (fold bifunctio 80.1 1.2 3.9E-05 48.5 4.1 34 572-611 156-190 (288)
497 3pef_A 6-phosphogluconate dehy 80.1 1.2 4.1E-05 47.7 4.2 33 576-614 2-34 (287)
498 3ond_A Adenosylhomocysteinase; 80.0 1 3.5E-05 52.4 3.8 35 573-613 263-297 (488)
499 1oc2_A DTDP-glucose 4,6-dehydr 80.0 3.4 0.00012 44.7 7.9 32 576-613 5-39 (348)
500 3qy9_A DHPR, dihydrodipicolina 80.0 4.2 0.00014 43.0 8.3 82 576-710 4-86 (243)
No 1
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.7e-169 Score=1568.88 Aligned_cols=803 Identities=46% Similarity=0.829 Sum_probs=756.4
Q ss_pred ChhhHhhhhhhhhccCHHHHHHhhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchH
Q 002073 154 TDIDEDLHSRQLAVYGRETMRRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNR 233 (972)
Q Consensus 154 ~~~d~~~YsRQi~l~G~e~q~kL~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~R 233 (972)
.++|++|||||+++||.++|+||++++|||+|+||+|+|+||||+++|||+|||+|+|.|+++||+|||+++++|||++|
T Consensus 3 ~~id~~rY~Rqi~l~G~~~q~rL~~s~VlIvG~GGlGseiak~La~aGVg~itlvD~D~V~~sNL~RQ~l~~~~dvG~~K 82 (1015)
T 3cmm_A 3 GEIDESLYSRQLYVLGKEAMLKMQTSNVLILGLKGLGVEIAKNVVLAGVKSMTVFDPEPVQLADLSTQFFLTEKDIGQKR 82 (1015)
T ss_dssp CCCCHHHHHHHHHHSCHHHHHHHTTCEEEEECCSHHHHHHHHHHHHHCCSEEEEECCSBCCGGGGGTCTTCCGGGTTSBH
T ss_pred hhhhhHhccchHhhcCHHHHHHHhcCEEEEECCChHHHHHHHHHHHcCCCeEEEecCCEechhhhccccccChhhcChHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeecCCChhhhcCCceEEEcCC-CHHHHHHHHHHHHhcCCCceeEEeeecceeEEEEEEcCC
Q 002073 234 ALASVQKLQELNNAVVLSTLTSKLTKEQLSDFQAVVFTDI-SLDKAIEFDDFCHNHQPAISFIKAEVRGLFGSVFCDFGP 312 (972)
Q Consensus 234 Aea~~~~L~eLNp~V~V~~~~~~l~~e~l~~fdvVV~~~~-~~~~~~~ln~~c~~~~~~IpfI~a~~~G~~G~vf~dfg~ 312 (972)
|++++++|+++||+|+|+++...++++++++||+||+|.+ +.+.+..||++|++++ +|||++++.|++|++|+|+|+
T Consensus 83 a~a~~~~L~~lNP~v~v~~~~~~l~~~~l~~~DvVv~~~d~~~~~r~~ln~~c~~~~--iplI~~~~~G~~G~v~~d~~~ 160 (1015)
T 3cmm_A 83 GDVTRAKLAELNAYVPVNVLDSLDDVTQLSQFQVVVATDTVSLEDKVKINEFCHSSG--IRFISSETRGLFGNTFVDLGD 160 (1015)
T ss_dssp HHHHHHHHTTSCTTSCEEECCCCCCSTTGGGCSEEEECTTSCHHHHHHHHHHHHHHT--CEEEEEEEETTEEEEEEECCS
T ss_pred HHHHHHHHHHHCCCCeEEEecCCCCHHHHhcCCEEEEcCCCCHHHHHHHHHHHHHcC--CCEEEEEecccEEEEEecCCC
Confidence 9999999999999999999999999999999999999999 9999999999999999 999999999999999999999
Q ss_pred ceEEecCCCCCCcceeecccccCCCceeecccccccccccCCeeEEEeeccccccCCCCCceecccCcceeeeccccccc
Q 002073 313 EFTVVDVDGEDPHTGIIASISNDNPALVSCVDDERLEFQDGDLVVFSEVHGMTELNDGKPRKIKSARPYSFTLEEDTTNY 392 (972)
Q Consensus 313 ~f~v~d~~ge~p~~~~I~~I~~~~~~lVt~~~~~rh~~~dgd~V~f~ev~gm~eln~~~~~~I~~~~~~~f~i~~Dt~~f 392 (972)
+|.|.+++|+.|.+++|.+| +.|++++|+++++|++++||+|.|++++||+++|++++++|++.+||+|.| +||+.|
T Consensus 161 ~~~c~~~~~~~p~~~~i~~i--~~p~~v~~l~~~~h~~~~gd~v~F~ev~gm~elN~~e~~~i~~~~p~~f~I-~Dts~~ 237 (1015)
T 3cmm_A 161 EFTVLDPTGEEPRTGMVSDI--EPDGTVTMLDDNRHGLEDGNFVRFSEVEGLDKLNDGTLFKVEVLGPFAFRI-GSVKEY 237 (1015)
T ss_dssp CEEESBSSCCCCCEEEEEEE--CTTCEEEESTTCCCCCCTTCEEEEECCBTSGGGGSSCCEECEEEETTEEEC-SCCTTT
T ss_pred ceEEeeCCCCCCccccccCC--CCCceeEeeecccccCCCCCeEEEEeeccchhhcCccceeeEEcCCceeEe-cccchh
Confidence 99999999999999999999 667899999999999999999999999999999999999999999999999 699999
Q ss_pred cceeecceEEEeecCeeecccchhhhhcCCCccccccCccCCCCChHHHHHHHHHHHHHHh-CCCCCCCChhhHHHHHHH
Q 002073 393 GTYVKGGIVTQVKQPKVLNFKPLREALEDPGDFLLSDFSKFDRPPPLHLAFQALDKFVSEL-GRFPVAGSEEDAQKLISV 471 (972)
Q Consensus 393 ~~y~~gG~~~qvk~pk~i~fksL~e~l~~p~~~l~~d~~k~~r~~~lh~~~~aL~~F~~~~-grlP~~~~~~Da~~l~~l 471 (972)
+.|++||+++|||+|++++|++|++++++| .++.+|+.|++++.++|++||||++|.++| ||+|++++++|+++|+++
T Consensus 238 ~~yv~~g~~~qvk~p~~i~f~~l~~~l~~p-~~l~~d~~k~~~~~~l~~~~~Al~~F~~~~~gr~P~~~~~~D~~~l~~~ 316 (1015)
T 3cmm_A 238 GEYKKGGIFTEVKVPRKISFKSLKQQLSNP-EFVFSDFAKFDRAAQLHLGFQALHQFAVRHNGELPRTMNDEDANELIKL 316 (1015)
T ss_dssp CCCCBCCEEEECCCCEEECCCCHHHHHHSC-CBCCSCGGGTHHHHHHHHHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHH
T ss_pred hhhhcCceeEEecCCcccCHHHHHHHHcCh-HHHHHHHhccCcchHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Confidence 999999999999999999999999999999 578889999999999999999999999999 999999999999999999
Q ss_pred HHHHHhhcCCC--CCCCCCHHHHHHHHhhcccccCchhhHhhhhhhhhHhhhhcCCccccceeeEeeeccCCCC---CCC
Q 002073 472 ATNINESLGDG--RVEDINTKLLRHFAFGARAVLNPMAAMFGGIVGQEVVKACSGKFHPLYQFFYFDSVESLPT---EPL 546 (972)
Q Consensus 472 a~~i~~~~~~~--~~~~ide~lv~~~a~~~~~el~PvaA~iGGiaAQEVIKaiTgKf~PI~q~~yfD~~e~Lp~---~~~ 546 (972)
+++++.+.+.. ...+++++++++|+++++++|||||||+||+|||||||+|||||+||+||||||+++++|+ .++
T Consensus 317 a~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~el~pvaA~iGGivAQEVIKaiT~kf~Pi~~~~~~d~~~~~~~~~~~~~ 396 (1015)
T 3cmm_A 317 VTDLSVQQPEVLGEGVDVNEDLIKELSYQARGDIPGVVAFFGGLVAQEVLKACSGKFTPLKQFMYFDSLESLPDPKNFPR 396 (1015)
T ss_dssp HHHHHHHCHHHHCTTCCCCHHHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHCBSCCCCSEEEEECGGGSCCTTTSCC
T ss_pred HHHHHHhcCCCccccccCcHHHHHHHHHhcCcccCcHHHHhcchHHHHHHHHhccCCCcccceEEecchhhccccccCCC
Confidence 99998764311 0036899999999999999999999999999999999999999999999999999999994 567
Q ss_pred CCCccCCccCchhhhhhhcCHHHHHHHhcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCccccc
Q 002073 547 DSTEFKPINSRYDAQISVFGAKLQKKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLF 626 (972)
Q Consensus 547 ~~~~~~~~~~RYdrqi~l~G~~~q~kL~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf 626 (972)
++++++|.++||+||+++||.++|++|+++||+||||||+||++|++||++||+||++|+|+|+|+|+|+.|||||||||
T Consensus 397 ~~~~~~~~~~Ry~rq~~l~G~~~q~kL~~~~VlvVGaGGlGsevlk~La~~Gv~~g~~G~i~lvD~D~Ve~SNLnRQ~lf 476 (1015)
T 3cmm_A 397 NEKTTQPVNSRYDNQIAVFGLDFQKKIANSKVFLVGSGAIGCEMLKNWALLGLGSGSDGYIVVTDNDSIEKSNLNRQFLF 476 (1015)
T ss_dssp STTTTSCCSSTTHHHHHHHCHHHHHHHHTCEEEEECCSHHHHHHHHHHHHHTTTCSTTCEEEEECCCBCCGGGTTTCTTC
T ss_pred ChhhccchhhhhhhHHHhcCHHHHHHHhcCeEEEEecCHHHHHHHHHHHHcCcCcCCCCeEEEEeCCEeccccccccccC
Confidence 88889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccccHHHHHHHHHHhhCCCc--EEEEeecccCCCcccccchhccCCCcEEEEccCChHHHHHHhhhhhccccceEe
Q 002073 627 RDWNIGQAKSTVAASAATSINPRL--NIEALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLE 704 (972)
Q Consensus 627 ~~~dVGk~Ks~vaa~~l~~inP~~--~I~~~~~~v~~~~e~i~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~~~kPli~ 704 (972)
+.+|||++||++|+++++++||++ +|+++..+++++++++|+++||+++|+||+|+||+++|++++++|+.+++|+|+
T Consensus 477 ~~~dvG~~Ka~~aa~~l~~iNP~v~~~v~~~~~~i~~~~~~~~~~~~~~~~D~Vi~a~Dn~~aR~~ln~~c~~~~~Pli~ 556 (1015)
T 3cmm_A 477 RPKDVGKNKSEVAAEAVCAMNPDLKGKINAKIDKVGPETEEIFNDSFWESLDFVTNALDNVDARTYVDRRCVFYRKPLLE 556 (1015)
T ss_dssp CGGGTTSBHHHHHHHHHHHHCGGGTTTEEEECCCCSGGGTTTSCHHHHHHCSEEEECCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred ChhhCCCHHHHHHHHHHHHHCCCCcceEEEEecccCchhhhhccHhhhccCCEEEECCCCHHHHHHHHHHHHHcCCcEEE
Confidence 999999999999999999999999 999999999988888888899999999999999999999999999999999999
Q ss_pred cccCCccceeEEEeCcccCccCCCCCCCCCCCCCccccCCCCChhhHHHHHHHHhhhcccCChhhHhhhcCCchhhhhhh
Q 002073 705 SGTLGAKCNTQMVIPHLTENYGASRDPPEKQAPMCTVHSFPHNIDHCLTWARSEFEGLLEKTPAEVNAYLSNPVEYTTSM 784 (972)
Q Consensus 705 sgt~G~~G~~~viip~~t~~y~~~~dp~~~~~p~Ctl~~fP~~~~h~i~wAr~~F~~lF~~~~~~~~~~l~~p~~~~~~~ 784 (972)
+|+.|++|++++++|+.|+||.|..+|+++++|+||+++||+.++|||+|||++|+++|.+.++++|+|++|| .|.+++
T Consensus 557 ~g~~G~~G~v~v~~p~~t~cy~c~~dp~~~~~P~Ctl~~~P~~~~h~i~wa~~~f~~lf~~~~~~~~~~l~~~-~~~~~~ 635 (1015)
T 3cmm_A 557 SGTLGTKGNTQVIIPRLTESYSSSRDPPEKSIPLCTLRSFPNKIDHTIAWAKSLFQGYFTDSAENVNMYLTQP-NFVEQT 635 (1015)
T ss_dssp EEEETTEEEEEEECTTTBCCGGGSCCCCCCCCCHHHHHTCCCSHHHHHHHHHHHHHHHHTHHHHHHHHHHHCT-THHHHH
T ss_pred eCCCccccceEEEeCCCCCccCCCCCCCCCCCCcccccCCCCCcHHHHHHHHHHHHHHHhhhhhhhhhhccCc-hhHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999 687777
Q ss_pred hccCchhHHHHHHHHHHHhhhccccchHHHHHHHHHhhHHHHhHhHHhhhccCCccccccCCCccccccCCCCCCcccCC
Q 002073 785 ANAGDAQARDNLERVLECLDKEKCEIFQDCITWARLKFEDYFSNRVKQLIFTFPEDAATSTGAPFWSAPKRFPHPLQFSS 864 (972)
Q Consensus 785 ~~~~~~~~~~~l~~v~~~l~~~~~~~~~~ci~~a~~~f~~~f~~~i~~Ll~~fp~d~~~~~g~~fws~~kr~p~pl~fd~ 864 (972)
.+....+. +.|+.+.+.| ..+|.+|++|++|||.+|+++|+++|+|||++||+|++|++|+||||+|||+|+||+||+
T Consensus 636 ~~~~~~~~-~~l~~~~~~l-~~~~~~~~~c~~~a~~~f~~~F~~~I~~Ll~~~p~d~~~~~g~~fW~~~kr~P~pl~fd~ 713 (1015)
T 3cmm_A 636 LKQSGDVK-GVLESISDSL-SSKPHNFEDCIKWARLEFEKKFNHDIKQLLFNFPKDAKTSNGEPFWSGAKRAPTPLEFDI 713 (1015)
T ss_dssp HC---CCH-HHHHHHHHHH-HSCCSSHHHHHHHHHHHHHHHHTHHHHHHHHHSCTTCBCSTTCBSSCTTCCCCCCCCCCT
T ss_pred HhccchhH-HHHHHHHHHh-hcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccCcccccCCCCCCCCcccCC
Confidence 66554443 7889999888 789999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcchHHHHHHHHHHHHHHcCCCCC--CCCCCHHHHHHHhhccCCCCccCCCCCeeecCccccccccCCCCcHHHHHHHH
Q 002073 865 ADPSHLHFVMAASILRAETFGIPIP--DWTNNPKMLAEAVDKVMVPDFLPKKDAKILTDEKATTLSTASVDDAAVINDLI 942 (972)
Q Consensus 865 ~~~~h~~fv~aaanL~a~~fgi~~~--~~~~~~~~~~~~~~~~~~p~f~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~ 942 (972)
+|++|++||.+||||||.+|||+.+ .|..+++.++++++++.||+|+|++|+||.++|++.++++.+.++.+.+++|.
T Consensus 714 ~~~~h~~fi~~~a~l~a~~~~i~~~~~~~~~~~~~~~~~~~~~~v~~f~~~~~~ki~~~~~~~~~~~~~~~~~~~~~~l~ 793 (1015)
T 3cmm_A 714 YNNDHFHFVVAGASLRAYNYGIKSDDSNSKPNVDEYKSVIDHMIIPEFTPNANLKIQVNDDDPDPNANAANGSDEIDQLV 793 (1015)
T ss_dssp TSHHHHHHHHHHHHHHHHHHTCCCSSTTSSCCHHHHHHHHTTCCCCCCCCCSSCCCCSSTTSSCC---------CCHHHH
T ss_pred CCHHHHHHHHHHHHhHHHhcCCCCccccccCCHHHHHHHHhhCcCCCcCCccCceeccchhhhcccccccccHHHHHHHH
Confidence 9999999999999999999999984 47789999999999999999999999999999876544322333566789999
Q ss_pred HHhhhhccCCCCCCCcceeeecccc
Q 002073 943 IKLEQCRKNLPSGFRLKPIQFEKVC 967 (972)
Q Consensus 943 ~~l~~~~~~~~~~~~~~p~~FeK~~ 967 (972)
++|+++.. ++++++.|++||||-
T Consensus 794 ~~l~~~~~--~~~~~~~~~~FeKDD 816 (1015)
T 3cmm_A 794 SSLPDPST--LAGFKLEPVDFEKDD 816 (1015)
T ss_dssp TTSCCGGG--GTTCCCCCCCCCTTC
T ss_pred HHhccchh--cccCCCCceeeecCC
Confidence 99999876 578999999999974
No 2
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=100.00 E-value=3.1e-67 Score=619.19 Aligned_cols=381 Identities=25% Similarity=0.344 Sum_probs=317.7
Q ss_pred ChhhH-hhhhhhhhccCHHHHHHhhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCch
Q 002073 154 TDIDE-DLHSRQLAVYGRETMRRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKN 232 (972)
Q Consensus 154 ~~~d~-~~YsRQi~l~G~e~q~kL~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~ 232 (972)
.++|+ +|||||+++||.++|++|++++|+|+|+||+|+|+||||+++|||+|||+|+|.|+.+||+||||++++|||++
T Consensus 7 ~~id~~~rY~Rqi~l~G~~~q~~L~~~~VlvvG~GGlGseiak~La~aGVg~itlvD~D~Ve~sNL~RQ~l~~~~dvG~~ 86 (531)
T 1tt5_A 7 GKLLKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKN 86 (531)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEECCSHHHHHHHHHHHTTTCSEEEEECCCBBCHHHHHHCTTCCGGGBTSB
T ss_pred ccccHHHHhhHHHHhcCHHHHHHHhcCeEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCEechhhcccCccCChhhcCcH
Confidence 36665 89999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeecCCC------hhhhcCCceEEEcCCCHHHHHHHHHHHHhcCCCceeEEeeecceeEEE
Q 002073 233 RALASVQKLQELNNAVVLSTLTSKLT------KEQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIKAEVRGLFGSV 306 (972)
Q Consensus 233 RAea~~~~L~eLNp~V~V~~~~~~l~------~e~l~~fdvVV~~~~~~~~~~~ln~~c~~~~~~IpfI~a~~~G~~G~v 306 (972)
||++++++|+++||+|+|+++...++ ++++++||+||+|.++.+.+..+|++|++++ +|||.+++.|++|++
T Consensus 87 Ka~~a~~~l~~lNp~v~v~~~~~~~~~~~~~~~~~~~~~DvVi~~~d~~~~r~~ln~~c~~~~--iplI~~~~~G~~G~v 164 (531)
T 1tt5_A 87 RAEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVATQLPESTSLRLADVLWNSQ--IPLLICRTYGLVGYM 164 (531)
T ss_dssp HHHHHHHHHHTTCTTSBCCEESSCHHHHHHSCGGGGGGCSEEEEESCCHHHHHHHHHHHHHTT--CCEEEEEEETTEEEE
T ss_pred HHHHHHHHHHHhCCCCeEEEeCCCcchhhhhhHHHhcCCCEEEEeCCCHHHHHHHHHHHHHcC--CCEEEEEecCCeEEE
Confidence 99999999999999999999987764 3688999999999999999999999999999 999999999999999
Q ss_pred EEEcCCceEEecCCCCCCcc------------eeecccc---------cCCCcee---ecccccccccccC-------Ce
Q 002073 307 FCDFGPEFTVVDVDGEDPHT------------GIIASIS---------NDNPALV---SCVDDERLEFQDG-------DL 355 (972)
Q Consensus 307 f~dfg~~f~v~d~~ge~p~~------------~~I~~I~---------~~~~~lV---t~~~~~rh~~~dg-------d~ 355 (972)
|++++ +|+++|.+|+.+.. ..+.++. ...|+++ ++++..+... +| |+
T Consensus 165 ~~~~p-~~~~~d~~~~~~~~~lr~~~p~P~~~~~~~~~~~~~~~~~~~~~~p~vv~~~~ale~~k~~~-~g~~P~~~~~~ 242 (531)
T 1tt5_A 165 RIIIK-EHPVIESHPDNALEDLRLDKPFPELREHFQSYDLDHMEKKDHSHTPWIVIIAKYLAQWYSET-NGRIPKTYKEK 242 (531)
T ss_dssp EEECS-CEEESCCCCSSCCCCCCSSSCCHHHHHHHHTCC-------CGGGSCHHHHHHHHHHHHTTTT-CCCCCCHHHHH
T ss_pred EEEcC-CceeccCCCCCCCCcccccCCCCCchhhhhccCcccccCCCcCCchHHHHHHHHHHHHHHhc-CCCCCCchhhH
Confidence 99999 79999998875432 2222221 1335555 5555543222 56 88
Q ss_pred eEEEee--ccc----cccCC--------------------------CCCceeccc----------------------Ccc
Q 002073 356 VVFSEV--HGM----TELND--------------------------GKPRKIKSA----------------------RPY 381 (972)
Q Consensus 356 V~f~ev--~gm----~eln~--------------------------~~~~~I~~~----------------------~~~ 381 (972)
+.|+++ +|| .|+|. ..+.+++.. -|+
T Consensus 243 ~~f~~~i~~~~~~~~~e~N~~Ea~~~~~~~~~~~~i~~~v~~~~~~~~~~~~~~~s~~Fwil~~alk~F~~~~~~g~lPl 322 (531)
T 1tt5_A 243 EDFRDLIRQGILKPEDEENFEEAIKNVNTALNTTQIPSSIEDIFNDDRCINITKQTPSFWILARALKEFVAKEGQGNLPV 322 (531)
T ss_dssp HHHHHHHHHTTSSCTTHHHHHHHHHHHHHHSCCCCCCHHHHHHHTSHHHHSCCSSCCHHHHHHHHHHHHHHTTTTTSCCC
T ss_pred HHHHHHHHhhcccCccccchHHHHHHHHhhcCCccCcHHHHHHhcccccccccCCCchHHHHHHHHHHHHHhcCCCCCCC
Confidence 999998 788 34332 112223222 388
Q ss_pred eeeeccc-cccccceeec--------------------ceEEEeec-CeeecccchhhhhcCCCc---------------
Q 002073 382 SFTLEED-TTNYGTYVKG--------------------GIVTQVKQ-PKVLNFKPLREALEDPGD--------------- 424 (972)
Q Consensus 382 ~f~i~~D-t~~f~~y~~g--------------------G~~~qvk~-pk~i~fksL~e~l~~p~~--------------- 424 (972)
+++| +| ++....|++. |++++++. |+.++|++++..+++|..
T Consensus 323 ~g~i-pDm~s~t~~Y~~lq~iy~~ka~~D~~~v~~~v~~~~~~~~~~~~~i~~~~i~~f~kn~~~l~~i~~~~l~~~~~~ 401 (531)
T 1tt5_A 323 RGTI-PDMIADSGKYIKLQNVYREKAKKDAAAVGNHVAKLLQSIGQAPESISEKELKLLCSNSAFLRVVRCRSLAEEYGL 401 (531)
T ss_dssp CCCC-CCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSSSSCHHHHHHHHHTGGGCEEECCCCHHHHHST
T ss_pred CCcc-CccccchhcccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCCHHHHHHHHhchhhhhcccccchHhhhcc
Confidence 8888 46 5555566544 55666666 666776666655555521
Q ss_pred ------cccccCccCCCCChHHHHHHHHHHHHHHhCCCCCCCC---hhhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 002073 425 ------FLLSDFSKFDRPPPLHLAFQALDKFVSELGRFPVAGS---EEDAQKLISVATNINESLGDGRVEDINTKLLRHF 495 (972)
Q Consensus 425 ------~l~~d~~k~~r~~~lh~~~~aL~~F~~~~grlP~~~~---~~Da~~l~~la~~i~~~~~~~~~~~ide~lv~~~ 495 (972)
.+.+++.+.+++.++|++||||++|.++|||+|++++ ++|+++|.+++++++...+. .+.+++++++++
T Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~al~~f~~~~gr~P~~~~~~~~~D~~~l~~~~~~~~~~~~~--~~~~~~~~~~e~ 479 (531)
T 1tt5_A 402 DTINKDEIISSMDNPDNEIVLYLMLRAVDRFHKQQGRYPGVSNYQVEEDIGKLKSCLTGFLQEYGL--SVMVKDDYVHEF 479 (531)
T ss_dssp TTSCHHHHHHHTTSTTSTHHHHHHHHHHHHHHHHHSSCTTCSTTTHHHHHHHHHHHHHHHHHHHTC--CCCCCHHHHHHH
T ss_pred ccchhhhhhhhhhccccchHHHHHHHHHHHHHHHhCCCCCccccchHHHHHHHHHHHHHHHHhcCC--cccccHHHHHHH
Confidence 2667888889999999999999999999999999987 89999999999999887653 246899999999
Q ss_pred HhhcccccCchhhHhhhhhhhhHhhhhcCCccccceeeEeeeccCC
Q 002073 496 AFGARAVLNPMAAMFGGIVGQEVVKACSGKFHPLYQFFYFDSVESL 541 (972)
Q Consensus 496 a~~~~~el~PvaA~iGGiaAQEVIKaiTgKf~PI~q~~yfD~~e~L 541 (972)
+++++++|||||||+||+|||||||+|||||+||+|||||||+++.
T Consensus 480 ~r~~~~el~pvaA~~GGi~AQEviK~iT~q~~Pi~n~~~fDg~~~~ 525 (531)
T 1tt5_A 480 CRYGAAEPHTIAAFLGGAAAQEVIKIITKQFVIFNNTYIYSGMSQT 525 (531)
T ss_dssp HHTTTCCCHHHHHHHHHHHHHHHHHHHHTCSBCCCSCEEEETTTTE
T ss_pred HHhcCCCcCHHHHHHHHHHHHHHHHHHcCCCccccceEEEecCCce
Confidence 9999999999999999999999999999999999999999999874
No 3
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=100.00 E-value=4.7e-64 Score=597.01 Aligned_cols=320 Identities=27% Similarity=0.481 Sum_probs=266.9
Q ss_pred hhhhcCHHHHHHHhcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHH
Q 002073 561 QISVFGAKLQKKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAA 640 (972)
Q Consensus 561 qi~l~G~~~q~kL~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa 640 (972)
|+++||.++|++|++++|+||||||+||++|++||++|| |+|+|+|+|+|+.|||||||||+.+|||++||++|+
T Consensus 3 qi~l~G~e~Q~kL~~s~VlVVGaGGLGsevak~La~aGV-----G~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa 77 (640)
T 1y8q_B 3 LSRGLPRELAEAVAGGRVLVVGAGGIGCELLKNLVLTGF-----SHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAK 77 (640)
T ss_dssp ---CCCHHHHHHHHHCEEEEECCSHHHHHHHHHHHHHTC-----CEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHH
T ss_pred hhhhcCHHHHHHHhcCeEEEECcCHHHHHHHHHHHHcCC-----CeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHH
Confidence 899999999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred HHHHhhCCCcEEEEeecccCCCcccccchhccCCCcEEEEccCChHHHHHHhhhhhccccceEecccCCccceeEEEeCc
Q 002073 641 SAATSINPRLNIEALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLESGTLGAKCNTQMVIPH 720 (972)
Q Consensus 641 ~~l~~inP~~~I~~~~~~v~~~~e~i~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~~~kPli~sgt~G~~G~~~viip~ 720 (972)
++++++||+++|+++..++.+. .++.+|++++|+||+|+||+++|.+++++|+.+++|+|++|+.|+.|++++++|+
T Consensus 78 ~~L~~iNP~v~V~a~~~~i~~~---~~~~~~~~~~DlVvda~Dn~~aR~~ln~~c~~~~iPlI~~g~~G~~G~v~vi~p~ 154 (640)
T 1y8q_B 78 ESVLQFYPKANIVAYHDSIMNP---DYNVEFFRQFILVMNALDNRAARNHVNRMCLAADVPLIESGTAGYLGQVTTIKKG 154 (640)
T ss_dssp HHHHTTCTTCEEEEEESCTTST---TSCHHHHTTCSEEEECCSCHHHHHHHHHHHHHHTCCEEEEEEETTEEEEEEECTT
T ss_pred HHHHHHCCCCeEEEEecccchh---hhhHhhhcCCCEEEECCCCHHHHHHHHHHHHHcCCCEEEEEEecccceEEEECCC
Confidence 9999999999999999988643 2446789999999999999999999999999999999999999999999999999
Q ss_pred ccCccCCCCCCCCCCCCCccccCCCCChhhHHHHHHHHhhhcccCCh--hhHhhhcCCchhhhhhhhccCchhHHHHHHH
Q 002073 721 LTENYGASRDPPEKQAPMCTVHSFPHNIDHCLTWARSEFEGLLEKTP--AEVNAYLSNPVEYTTSMANAGDAQARDNLER 798 (972)
Q Consensus 721 ~t~~y~~~~dp~~~~~p~Ctl~~fP~~~~h~i~wAr~~F~~lF~~~~--~~~~~~l~~p~~~~~~~~~~~~~~~~~~l~~ 798 (972)
.|+||.|..+|+++++|+||++++|+.++|||+||+++|+++|++.+ ++++.++++|....+........+..+.++.
T Consensus 155 ~t~Cy~C~~~p~~~~~p~Cti~~~p~~~~hci~~a~~~f~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (640)
T 1y8q_B 155 VTECYECHPKPTQRTFPGATIRNTPSEPIHCIVWAKYLFNQLFGEEDADQEVSPDRADPEAAWEPTEAEARARASNEDGD 234 (640)
T ss_dssp TSCCTTSSCCCCCCCCCTTTTTSCCCSHHHHHHHHHHHHHHHHSCCCGGGCCSCCTTCTTSCCC----------------
T ss_pred CCCCcccCCCCCCcccceeeecCCCCchHHHHHHHHHHHHHHhCCcchhhhhcccccchhhhhhhhhhhhhhhhhhhhhH
Confidence 99999999999999999999999999999999999999999999876 3444556666431111111111222334444
Q ss_pred HHHHhhhccccchHHHHHHHHH-hhHHHHhHhHHhhhccCCccccccCCCccccccCCCCCCc-----------------
Q 002073 799 VLECLDKEKCEIFQDCITWARL-KFEDYFSNRVKQLIFTFPEDAATSTGAPFWSAPKRFPHPL----------------- 860 (972)
Q Consensus 799 v~~~l~~~~~~~~~~ci~~a~~-~f~~~f~~~i~~Ll~~fp~d~~~~~g~~fws~~kr~p~pl----------------- 860 (972)
+... .+.+|.+|+.||+. +|+++|+++|+|||++ .+||++ ||+|+||
T Consensus 235 ~~~~----~~~~~~~~~~~a~~~~f~k~F~~~I~~Ll~~----------~~fW~~-kr~P~pl~fd~~~~~~~~~~~~~~ 299 (640)
T 1y8q_B 235 IKRI----STKEWAKSTGYDPVKLFTKLFKDDIRYLLTM----------DKLWRK-RKPPVPLDWAEVQSQGEETNASDQ 299 (640)
T ss_dssp ---------CHHHHHHTTSCHHHHHHHHHTHHHHHHTTC----------GGGCSS-SCCCCCCCHHHHHHC---------
T ss_pred HHHH----hhhhHHHhHhHHHHHHHHHHHhhHHHHHHhC----------cccccC-CCCCCCcccCcccccccccccccc
Confidence 4433 25589999999984 9999999999999986 699999 9998763
Q ss_pred -------------------------------------------ccCCCCcchHHHHHHHHHHHHHHcCCCCCCCCCCHHH
Q 002073 861 -------------------------------------------QFSSADPSHLHFVMAASILRAETFGIPIPDWTNNPKM 897 (972)
Q Consensus 861 -------------------------------------------~fd~~~~~h~~fv~aaanL~a~~fgi~~~~~~~~~~~ 897 (972)
+||+||+.|++||+|||||||++|||++. ++-.
T Consensus 300 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~FdKDDd~h~dFV~aaaNlRA~~y~I~~~----~~~~ 375 (640)
T 1y8q_B 300 QNEPQLGLKDQQVLDVKSYARLFSKSIETLRVHLAEKGDGAELIWDKDDPSAMDFVTSAANLRMHIFSMNMK----SRFD 375 (640)
T ss_dssp -----CCCGGGSCCCHHHHHHHHHHHHHHHHHHHHHTCTTCCCCCCTTCHHHHHHHHHHHHHHHHHTTCCCC----CHHH
T ss_pred ccccccCCChhhhcChhhhhhhHHHHHHHHHHHhhhcccCCCcccCCCCHHHHHHHHHHHHHHHHHcCCCcC----CHHH
Confidence 59999999999999999999999999985 3434
Q ss_pred HHHHhhccCCC
Q 002073 898 LAEAVDKVMVP 908 (972)
Q Consensus 898 ~~~~~~~~~~p 908 (972)
++.++. -+||
T Consensus 376 ~K~iAG-~IIP 385 (640)
T 1y8q_B 376 IKSMAG-NIIP 385 (640)
T ss_dssp HHHHHH-TCCC
T ss_pred HHHHhC-Cccc
Confidence 444333 3444
No 4
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=100.00 E-value=3e-62 Score=550.53 Aligned_cols=322 Identities=32% Similarity=0.475 Sum_probs=273.4
Q ss_pred CChhhHhhhhhhhhccCHHHHHHhhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCch
Q 002073 153 QTDIDEDLHSRQLAVYGRETMRRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKN 232 (972)
Q Consensus 153 ~~~~d~~~YsRQi~l~G~e~q~kL~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~ 232 (972)
.++.+.+|||||+++||.++|++|++++|+|+|+||+|+|+||||+++|||+|||+|+|.|+++||+||||++++|||++
T Consensus 11 l~~~~~~rY~Rq~~l~G~~~q~~L~~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~ 90 (346)
T 1y8q_A 11 ISEEEAAQYDRQIRLWGLEAQKRLRASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRN 90 (346)
T ss_dssp CCHHHHHHHHHHHHHHCHHHHHHHHTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSB
T ss_pred CCHHHHHHHHHHHHhhCHHHHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCC
Confidence 56788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeecCC---ChhhhcCCceEEEcCCCHHHHHHHHHHHHhcCCCceeEEeeecceeEEEEEE
Q 002073 233 RALASVQKLQELNNAVVLSTLTSKL---TKEQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIKAEVRGLFGSVFCD 309 (972)
Q Consensus 233 RAea~~~~L~eLNp~V~V~~~~~~l---~~e~l~~fdvVV~~~~~~~~~~~ln~~c~~~~~~IpfI~a~~~G~~G~vf~d 309 (972)
||++++++|+++||+|+|+++...+ .++++++||+||+|.++.+.+..||++|++++ +|||.+++.|++|++|+|
T Consensus 91 Ka~~~~~~l~~lnp~v~v~~~~~~~~~~~~~~~~~~dvVv~~~d~~~~r~~ln~~~~~~~--ip~i~~~~~G~~G~v~~d 168 (346)
T 1y8q_A 91 RAEASLERAQNLNPMVDVKVDTEDIEKKPESFFTQFDAVCLTCCSRDVIVKVDQICHKNS--IKFFTGDVFGYHGYTFAN 168 (346)
T ss_dssp HHHHHHHHHHHTCTTSEEEEECSCGGGCCHHHHTTCSEEEEESCCHHHHHHHHHHHHHTT--CEEEEEEEEBTEEEEEEE
T ss_pred HHHHHHHHHHhHCCCeEEEEEecccCcchHHHhcCCCEEEEcCCCHHHHHHHHHHHHHcC--CCEEEEeecccEEEEEEe
Confidence 9999999999999999999998877 45789999999999999999999999999999 999999999999999999
Q ss_pred cCCceEEecCCCCCCcceeecccccCCCceeecccccccccccCCeeEEEeecccccc-CCCCCceecccCcceeeeccc
Q 002073 310 FGPEFTVVDVDGEDPHTGIIASISNDNPALVSCVDDERLEFQDGDLVVFSEVHGMTEL-NDGKPRKIKSARPYSFTLEED 388 (972)
Q Consensus 310 fg~~f~v~d~~ge~p~~~~I~~I~~~~~~lVt~~~~~rh~~~dgd~V~f~ev~gm~el-n~~~~~~I~~~~~~~f~i~~D 388 (972)
+|+++++.+..|+.. +++|.+. |+++++++ |
T Consensus 169 ~~~~~~~~~~~~~~~------------------------------------~p~~~~~~~~~~~~~~------------d 200 (346)
T 1y8q_A 169 LGEHEFVEEKTKVAK------------------------------------VSQGVEDGPDTKRAKL------------D 200 (346)
T ss_dssp CSEEEEEEECC---------------------------------------------------------------------
T ss_pred cCCCCEEEcCCCCcC------------------------------------CCcccccCCCCCcccc------------c
Confidence 998888888766311 1111111 11222222 1
Q ss_pred cccccceeecceEEEeecCeeecccchhhhhcCCCccccccC-ccCCCCChHHHHHHHHHHHHHHhCCCCCC-CChhhHH
Q 002073 389 TTNYGTYVKGGIVTQVKQPKVLNFKPLREALEDPGDFLLSDF-SKFDRPPPLHLAFQALDKFVSELGRFPVA-GSEEDAQ 466 (972)
Q Consensus 389 t~~f~~y~~gG~~~qvk~pk~i~fksL~e~l~~p~~~l~~d~-~k~~r~~~lh~~~~aL~~F~~~~grlP~~-~~~~Da~ 466 (972)
++ ++++.|++++|+||++++..|.. ..++ .+.+|++.+|++|+||++|+++|||+|.+ ++++|++
T Consensus 201 ~~-----------~~~~~~~~~~f~~l~~~~~~~~~--~~~~~~~~~r~~~~~~~~~al~~f~~~~~~~P~~~~~~~d~~ 267 (346)
T 1y8q_A 201 SS-----------ETTMVKKKVVFCPVKEALEVDWS--SEKAKAALKRTTSDYFLLQVLLKFRTDKGRDPSSDTYEEDSE 267 (346)
T ss_dssp -------------CCCEEEEEEECCCHHHHTSCCSC--SHHHHHHHTTSCTHHHHHHHHHHHHHHSSSCCCGGGHHHHHH
T ss_pred CC-----------ceEEEeceeeccCHHHHhcCCch--hhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 11 34677899999999999998732 1122 24689999999999999999999999974 6799999
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhhcccccCchhhHhhhhhhhhHhhhhcCCccccceeeEeeeccCCC
Q 002073 467 KLISVATNINESLGDGRVEDINTKLLRHFAFGARAVLNPMAAMFGGIVGQEVVKACSGKFHPLYQFFYFDSVESLP 542 (972)
Q Consensus 467 ~l~~la~~i~~~~~~~~~~~ide~lv~~~a~~~~~el~PvaA~iGGiaAQEVIKaiTgKf~PI~q~~yfD~~e~Lp 542 (972)
+|.+++++++++.+.. ...+++++++++ .++|+|||||+||++||||||+|||||+||+||||||+++++.
T Consensus 268 ~l~~~a~~~~~~~~~~-~~~~~~~~~~~~----~~~l~pv~AiiGGi~aQEviK~it~k~~Pl~n~~~fD~~~~~~ 338 (346)
T 1y8q_A 268 LLLQIRNDVLDSLGIS-PDLLPEDFVRYC----FSEMAPVCAVVGGILAQEIVKALSQRDPPHNNFFFFDGMKGNG 338 (346)
T ss_dssp HHHHHHHHHHHTTTCC-GGGSCGGGGGSS----CSBCHHHHHHHHHHHHHHHHHHHHTBSCCCCSEEEEETTTTEE
T ss_pred HHHHHHHHHHHhcCCC-cccCCHHHHHHh----cCCccHHHHHHHHHHHHHHHHHhcCCCcccccEEEEEccccce
Confidence 9999999998876432 234778887765 7899999999999999999999999999999999999999864
No 5
>1z7l_A Ubiquitin-activating enzyme E1 1; SCCH, second catalytic cysteine half-domain, ligase; HET: TBR; 2.80A {Mus musculus}
Probab=100.00 E-value=2.1e-54 Score=468.65 Aligned_cols=230 Identities=38% Similarity=0.693 Sum_probs=206.7
Q ss_pred CCCCCCCCccccCCCCChhhHHHHHHHHhhhcccCChhhHhhhcCCchhhhhhhhccCchhHHHHHHHHHHHhhhccccc
Q 002073 731 PPEKQAPMCTVHSFPHNIDHCLTWARSEFEGLLEKTPAEVNAYLSNPVEYTTSMANAGDAQARDNLERVLECLDKEKCEI 810 (972)
Q Consensus 731 p~~~~~p~Ctl~~fP~~~~h~i~wAr~~F~~lF~~~~~~~~~~l~~p~~~~~~~~~~~~~~~~~~l~~v~~~l~~~~~~~ 810 (972)
.-.+++|+|||||||+.|+|||+|||++|+++|++.++++|+||+|| .|++++.+.++.+..+.|+.|.++|...+|.+
T Consensus 9 ~~~ks~P~CTlrsfP~~i~HcI~WAr~lFe~lF~~~~~~~n~~l~dp-~~~~~~~~~~~~~~~~~l~~i~~~L~~~~p~~ 87 (276)
T 1z7l_A 9 EFEKSIPICTLKNFPNAIEHTLQWARDEFEGLFKQPAENVNQYLTDS-KFVERTLRLAGTQPLEVLEAVQRSLVLQRPQT 87 (276)
T ss_dssp -----CCHHHHHTCCCSHHHHHHHHHHHHHHHHTHHHHHHHHHTTCS-HHHHHHHTSSTTHHHHHHHHHHHHHTTTCCSS
T ss_pred cCCCCCceeccCCCCCChhHHHHHHHHHHHHHHcCCHHHHHHhhcCh-HHHHHHHhccchhhHHHHHHHHHHHhhcCCCc
Confidence 44689999999999999999999999999999999999999999999 78888888777777889999999998899999
Q ss_pred hHHHHHHHHHhhHHHHhHhHHhhhccCCccccccCCCccccccCCCCCCcccCCCCcchHHHHHHHHHHHHHHcCCCCCC
Q 002073 811 FQDCITWARLKFEDYFSNRVKQLIFTFPEDAATSTGAPFWSAPKRFPHPLQFSSADPSHLHFVMAASILRAETFGIPIPD 890 (972)
Q Consensus 811 ~~~ci~~a~~~f~~~f~~~i~~Ll~~fp~d~~~~~g~~fws~~kr~p~pl~fd~~~~~h~~fv~aaanL~a~~fgi~~~~ 890 (972)
|++|++|||.+|+++|+++|+|||++||+|++|++|+||||||||+|+||+||++|++|++||.|||||||.+|||++.
T Consensus 88 ~~~c~~~Ar~~F~k~F~~~I~qLL~~fP~D~~t~~G~~fWsg~Kr~P~PL~fd~~~~~h~~fI~aaa~L~A~~~gi~~~- 166 (276)
T 1z7l_A 88 WGDCVTWACHHWHTQYCNNIRQLLHNFPPDQLTSSGAPFWSGPKRCPHPLTFDVNNTLHLDYVMAAANLFAQTYGLTGS- 166 (276)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHSCTTCBCTTSCBSSCSSCCCCCCCCCCTTSHHHHHHHHHHHHHHHHHTTCCCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccCCCcccCCCCCCCCCcccCCCchHHHHHHHHHHHHHHHHcCCCCC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999975
Q ss_pred CCCCHHHHHHHhhccCCCCccCCCCCeeecCccccccccCCCCcHHHHHHHHHHhhhhccCCCCCCCcceeeecccc
Q 002073 891 WTNNPKMLAEAVDKVMVPDFLPKKDAKILTDEKATTLSTASVDDAAVINDLIIKLEQCRKNLPSGFRLKPIQFEKVC 967 (972)
Q Consensus 891 ~~~~~~~~~~~~~~~~~p~f~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~p~~FeK~~ 967 (972)
.+++.+.++++++.||+|+|++|+||.++|++.++++.+.+ .+.+++|.++|+++.. ++++++.|++||||.
T Consensus 167 --~d~~~i~~~~~~~~vp~f~p~~~~ki~~~e~~~~~~~~~~~-~~~~~~L~~~l~~~~~--~~~~~~~pl~FeKDD 238 (276)
T 1z7l_A 167 --QDRAAVASLLQSVQVPEFTPKSGVKIHVSDQELQSANASVD-DSRLEELKATLPSPDK--LPGFKMYPIDFEKDD 238 (276)
T ss_dssp --CCHHHHHHHHHTCCCCCCCCCSSCCCCSSSCCC------CC-SHHHHHHHHHSCCGGG--STTCCCCCCCCCSSC
T ss_pred --CCHHHHHHHHhcCCCCCcCCccccccccchhhhchhccccc-HHHHHHHHHHhhhhhh--cccccCCCcceecCC
Confidence 68899999999999999999999999999976654433323 5689999999999877 578999999999974
No 6
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=100.00 E-value=3.4e-42 Score=396.85 Aligned_cols=235 Identities=31% Similarity=0.583 Sum_probs=207.4
Q ss_pred cCchhhhhhhcCHHH-------------H-HHHhcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCcccccCC
Q 002073 555 NSRYDAQISVFGAKL-------------Q-KKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNL 620 (972)
Q Consensus 555 ~~RYdrqi~l~G~~~-------------q-~kL~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNL 620 (972)
..||+++-++++.++ + ..|+++||+||||||+||+++++||++|| |+|+|+|+|+||.|||
T Consensus 6 ~~r~~~vntl~~~~g~~~g~gf~~g~e~~~~~L~~~~VlvvG~GGlGs~va~~La~aGv-----g~i~ivD~D~Ve~sNL 80 (434)
T 1tt5_B 6 EGRWNHVKKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGF-----RQIHVIDMDTIDVSNL 80 (434)
T ss_dssp TTTTHHHHHHHHSCCSSCCTTCCCCSSHHHHHHHTCCEEEECSSTHHHHHHHHHHHTTC-----CCEEEEECCBCCGGGT
T ss_pred hhhhccceEEEcCCCcccccccccCHHHHHHHhcCCEEEEECcCHHHHHHHHHHHHcCC-----CEEEEEcCCEechhcc
Confidence 357777777765443 4 56699999999999999999999999999 9999999999999999
Q ss_pred CcccccccCcccccHHHHHHHHHHhhCCCcEEEEeecccCCCcccccchhccCCCcEEEEccCChHHHHHHhhhhhcc--
Q 002073 621 SRQFLFRDWNIGQAKSTVAASAATSINPRLNIEALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYF-- 698 (972)
Q Consensus 621 nRQfLf~~~dVGk~Ks~vaa~~l~~inP~~~I~~~~~~v~~~~e~i~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~~-- 698 (972)
+|||||+.+|||++||++|+++++++||+++|+++..++... +.++++++|+||+|+||+++|+++|+.|+.+
T Consensus 81 ~RQ~l~~~~diG~~Ka~~a~~~l~~lnp~v~v~~~~~~i~~~-----~~~~~~~~DlVi~~~Dn~~~R~~in~~c~~~~~ 155 (434)
T 1tt5_B 81 NRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKIQDF-----NDTFYRQFHIIVCGLDSIIARRWINGMLISLLN 155 (434)
T ss_dssp TTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEEESCGGGB-----CHHHHTTCSEEEECCSCHHHHHHHHHHHHHTCC
T ss_pred CCCcCCChhHcCcHHHHHHHHHHHhhCCCCEEEEEecccchh-----hHHHhcCCCEEEECCCCHHHHHHHHHHHHHhhh
Confidence 999999999999999999999999999999999999888753 2478899999999999999999999999874
Q ss_pred ----------ccceEecccCCccceeEEEeCcccCccCCCCC--CCCCCCCCccccCCCCChhhHHHHHHHHhhhcccCC
Q 002073 699 ----------QKPLLESGTLGAKCNTQMVIPHLTENYGASRD--PPEKQAPMCTVHSFPHNIDHCLTWARSEFEGLLEKT 766 (972)
Q Consensus 699 ----------~kPli~sgt~G~~G~~~viip~~t~~y~~~~d--p~~~~~p~Ctl~~fP~~~~h~i~wAr~~F~~lF~~~ 766 (972)
++|+|++|+.|+.|++.+++|+.|+||.|..+ |+++..|.||+++||+.++|||+||+.+.
T Consensus 156 ~~~g~~~~~~~iPli~~~~~g~~G~v~v~~p~~t~Cy~C~~~~~p~~~~~p~Ct~~~~p~~~~h~i~~a~~i~------- 228 (434)
T 1tt5_B 156 YEDGVLDPSSIVPLIDGGTEGFKGNARVILPGMTACIECTLELYPPQVNFPMCTIASMPRLPEHCIEYVRMLQ------- 228 (434)
T ss_dssp BSSSCBCGGGCCCEEEEEEETTEEEEEEECTTTSCCGGGGGGGSCCCCCCCHHHHHHCCCSHHHHHHHHHHTH-------
T ss_pred ccccccccccCCcEEEeccccceeEEEEECCCCCCCcccccCCCCCcCCCcccccccCCcchhHHHHHHHHHH-------
Confidence 89999999999999999999999999999754 77788999999999999999999998520
Q ss_pred hhhHhhhcCCchhhhhhhhccCchhHHHHHHHHHHHhhhccccchHHHHHHHHHhhHHHHhHhHHhhhccCCccccccCC
Q 002073 767 PAEVNAYLSNPVEYTTSMANAGDAQARDNLERVLECLDKEKCEIFQDCITWARLKFEDYFSNRVKQLIFTFPEDAATSTG 846 (972)
Q Consensus 767 ~~~~~~~l~~p~~~~~~~~~~~~~~~~~~l~~v~~~l~~~~~~~~~~ci~~a~~~f~~~f~~~i~~Ll~~fp~d~~~~~g 846 (972)
| ++. +|
T Consensus 229 --------------------------------------------------~-----~~~-----------~~-------- 234 (434)
T 1tt5_B 229 --------------------------------------------------W-----PKE-----------QP-------- 234 (434)
T ss_dssp --------------------------------------------------H-----HHS-----------CT--------
T ss_pred --------------------------------------------------H-----hhh-----------cc--------
Confidence 1 000 00
Q ss_pred CccccccCCCCCCcccCCCCcchHHHHHHHHHHHHHHcCCCCC
Q 002073 847 APFWSAPKRFPHPLQFSSADPSHLHFVMAASILRAETFGIPIP 889 (972)
Q Consensus 847 ~~fws~~kr~p~pl~fd~~~~~h~~fv~aaanL~a~~fgi~~~ 889 (972)
.+.|+.||++|+.|++||+++||+||..|||++.
T Consensus 235 ---------~~~~~~~d~d~~~~~~~v~~~a~~~~~~~gi~~~ 268 (434)
T 1tt5_B 235 ---------FGEGVPLDGDDPEHIQWIFQKSLERASQYNIRGV 268 (434)
T ss_dssp ---------TCTTCCCCTTCHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred ---------cccccccCCCcHHHHHHHHHHHHHHHHHcCCCcc
Confidence 1346899999999999999999999999999753
No 7
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=100.00 E-value=3.6e-39 Score=399.93 Aligned_cols=227 Identities=32% Similarity=0.577 Sum_probs=205.4
Q ss_pred hhcCHHHHHHH-hcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHH
Q 002073 563 SVFGAKLQKKL-EDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAAS 641 (972)
Q Consensus 563 ~l~G~~~q~kL-~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~ 641 (972)
-++|.+.|+++ +++||+||||||+||+++++|+++|| |+|+|+|+|+||.|||+|||||+.+|||++|++++++
T Consensus 398 ~~~g~~~~~~~l~~~~vlvvG~GglG~~~~~~L~~~Gv-----g~i~l~D~d~v~~snl~rq~~~~~~~vg~~Ka~~~~~ 472 (805)
T 2nvu_B 398 FEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGF-----RQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAE 472 (805)
T ss_dssp CCCCSHHHHHHHHTCCEEEECCSSHHHHHHHHHHTTTC-----CEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHH
T ss_pred cCCCHHHHHHHHhCCeEEEECCCHHHHHHHHHHHHcCC-----CcEEEECCCeecccccccccccchhhcCChHHHHHHH
Confidence 45799999988 99999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred HHHhhCCCcEEEEeecccCCCcccccchhccCCCcEEEEccCChHHHHHHhhhhhcc------------ccceEecccCC
Q 002073 642 AATSINPRLNIEALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYF------------QKPLLESGTLG 709 (972)
Q Consensus 642 ~l~~inP~~~I~~~~~~v~~~~e~i~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~~------------~kPli~sgt~G 709 (972)
+++++||+++|+++..++.+.+ .++++++|+||+|+||+++|+++|+.|+.. ++|+|++|+.|
T Consensus 473 ~l~~~np~~~v~~~~~~~~~~~-----~~~~~~~d~vv~~~d~~~~r~~in~~~~~~~~~~~g~~~~~~~~p~i~~~~~g 547 (805)
T 2nvu_B 473 FLNDRVPNCNVVPHFNKIQDFN-----DTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGTEG 547 (805)
T ss_dssp HHHHHSTTCEEEEEESCGGGSC-----HHHHHTCSEEEECCSCHHHHHHHHHHHHHTCCEETTEECGGGCCCEEEEEEET
T ss_pred HHHHHCCCCEEEEEeccccccH-----HHHHhcCCEEEECCCCHHHHHHHHHHHHHHhhccccccccccCCcEEEecccc
Confidence 9999999999999999987532 467889999999999999999999999874 99999999999
Q ss_pred ccceeEEEeCcccCccCCCC--CCCCCCCCCccccCCCCChhhHHHHHHHHhhhcccCChhhHhhhcCCchhhhhhhhcc
Q 002073 710 AKCNTQMVIPHLTENYGASR--DPPEKQAPMCTVHSFPHNIDHCLTWARSEFEGLLEKTPAEVNAYLSNPVEYTTSMANA 787 (972)
Q Consensus 710 ~~G~~~viip~~t~~y~~~~--dp~~~~~p~Ctl~~fP~~~~h~i~wAr~~F~~lF~~~~~~~~~~l~~p~~~~~~~~~~ 787 (972)
+.|++.+++|+.|+||.|.. .|+....|.|+++++|+.++|||+||+...
T Consensus 548 ~~G~~~~~~p~~~~c~~c~~~~~p~~~~~~~c~~~~~~~~~~~~i~~a~~~~---------------------------- 599 (805)
T 2nvu_B 548 FKGNARVILPGMTACIECTLELYPPQVNFPMCTIASMPRLPEHCIEYVRMLQ---------------------------- 599 (805)
T ss_dssp TEEEEEEECTTTSCCTTTSGGGSCCCCCCCHHHHHHCCCSHHHHHHHHHHTH----------------------------
T ss_pred CceeEEEECCCCCCceeccCCCCCCCCCCCccccCCCCCCccHHHHHHHHhh----------------------------
Confidence 99999999999999999974 477788999999999999999999998520
Q ss_pred CchhHHHHHHHHHHHhhhccccchHHHHHHHHHhhHHHHhHhHHhhhccCCccccccCCCccccccCCCCCCcccCCCCc
Q 002073 788 GDAQARDNLERVLECLDKEKCEIFQDCITWARLKFEDYFSNRVKQLIFTFPEDAATSTGAPFWSAPKRFPHPLQFSSADP 867 (972)
Q Consensus 788 ~~~~~~~~l~~v~~~l~~~~~~~~~~ci~~a~~~f~~~f~~~i~~Ll~~fp~d~~~~~g~~fws~~kr~p~pl~fd~~~~ 867 (972)
|... +..+.|++||++|+
T Consensus 600 -----------------------------~~~~---------------------------------~~~~~~~~~d~~~~ 617 (805)
T 2nvu_B 600 -----------------------------WPKE---------------------------------QPFGEGVPLDGDDP 617 (805)
T ss_dssp -----------------------------HHHH---------------------------------CTTSTTCCCCTTCH
T ss_pred -----------------------------cccc---------------------------------cCCCCcccCCCCCH
Confidence 1000 01235789999999
Q ss_pred chHHHHHHHHHHHHHHcCCCCC
Q 002073 868 SHLHFVMAASILRAETFGIPIP 889 (972)
Q Consensus 868 ~h~~fv~aaanL~a~~fgi~~~ 889 (972)
.|++||+++||+||..|||.+.
T Consensus 618 ~~~~~~~~~~~~~~~~~gi~~~ 639 (805)
T 2nvu_B 618 EHIQWIFQKSLERASQYNIRGV 639 (805)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHHHHHHHhCCCCc
Confidence 9999999999999999999754
No 8
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=100.00 E-value=7.6e-36 Score=352.09 Aligned_cols=190 Identities=22% Similarity=0.345 Sum_probs=173.0
Q ss_pred cCchhhhhhhcCHHHHHHHhcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCccccc
Q 002073 555 NSRYDAQISVFGAKLQKKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQA 634 (972)
Q Consensus 555 ~~RYdrqi~l~G~~~q~kL~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~ 634 (972)
..||+||+++||.++|++|++++|+||||||+||++||+|+++|| |+|+|+|+|+|+.|||+|||||+.+|||++
T Consensus 12 ~~rY~Rqi~l~G~~~q~~L~~~~VlvvG~GGlGseiak~La~aGV-----g~itlvD~D~Ve~sNL~RQ~l~~~~dvG~~ 86 (531)
T 1tt5_A 12 EQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGI-----GSFTIIDGNQVSGEDAGNNFFLQRSSIGKN 86 (531)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHCEEEEECCSHHHHHHHHHHHTTTC-----SEEEEECCCBBCHHHHHHCTTCCGGGBTSB
T ss_pred HHHhhHHHHhcCHHHHHHHhcCeEEEECcCHHHHHHHHHHHHcCC-----CeEEEEeCCEechhhcccCccCChhhcCcH
Confidence 369999999999999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhCCCcEEEEeecccCCCcccccchhccCCCcEEEEccCChHHHHHHhhhhhccccceEecccCCcccee
Q 002073 635 KSTVAASAATSINPRLNIEALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLESGTLGAKCNT 714 (972)
Q Consensus 635 Ks~vaa~~l~~inP~~~I~~~~~~v~~~~e~i~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~~~kPli~sgt~G~~G~~ 714 (972)
||++++++++++||+++|+++...+....+ ...+|++++|+||+|+||..+|.++++.|+.+++|+|++|+.|+.|++
T Consensus 87 Ka~~a~~~l~~lNp~v~v~~~~~~~~~~~~--~~~~~~~~~DvVi~~~d~~~~r~~ln~~c~~~~iplI~~~~~G~~G~v 164 (531)
T 1tt5_A 87 RAEAAMEFLQELNSDVSGSFVEESPENLLD--NDPSFFCRFTVVVATQLPESTSLRLADVLWNSQIPLLICRTYGLVGYM 164 (531)
T ss_dssp HHHHHHHHHHTTCTTSBCCEESSCHHHHHH--SCGGGGGGCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEEEETTEEEE
T ss_pred HHHHHHHHHHHhCCCCeEEEeCCCcchhhh--hhHHHhcCCCEEEEeCCCHHHHHHHHHHHHHcCCCEEEEEecCCeEEE
Confidence 999999999999999999999887753111 125788999999999999999999999999999999999999999999
Q ss_pred EEEeCcccCccCCCCCCCCCCCCCccccCCCCChhhHHHH
Q 002073 715 QMVIPHLTENYGASRDPPEKQAPMCTVHSFPHNIDHCLTW 754 (972)
Q Consensus 715 ~viip~~t~~y~~~~dp~~~~~p~Ctl~~fP~~~~h~i~w 754 (972)
.+++|. ..++.+ +|+++..++|++++||..++||-.+
T Consensus 165 ~~~~p~-~~~~d~--~~~~~~~~lr~~~p~P~~~~~~~~~ 201 (531)
T 1tt5_A 165 RIIIKE-HPVIES--HPDNALEDLRLDKPFPELREHFQSY 201 (531)
T ss_dssp EEECSC-EEESCC--CCSSCCCCCCSSSCCHHHHHHHHTC
T ss_pred EEEcCC-ceeccC--CCCCCCCcccccCCCCCchhhhhcc
Confidence 999994 445544 4556778999999999999999544
No 9
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=100.00 E-value=9.6e-33 Score=318.18 Aligned_cols=273 Identities=19% Similarity=0.253 Sum_probs=206.5
Q ss_pred cCHHHHH-HhhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcC
Q 002073 168 YGRETMR-RLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNN 246 (972)
Q Consensus 168 ~G~e~q~-kL~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp 246 (972)
.|.++++ +|++++|+|+|+||+|+++||||+++|||+|+|+|+|.|+.+||+|||+++++|||++||++++++|+++||
T Consensus 29 ~g~e~~~~~L~~~~VlvvG~GGlGs~va~~La~aGvg~i~ivD~D~Ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~lnp 108 (434)
T 1tt5_B 29 PSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVP 108 (434)
T ss_dssp CCSSHHHHHHHTCCEEEECSSTHHHHHHHHHHHTTCCCEEEEECCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHST
T ss_pred cCHHHHHHHhcCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEcCCEechhccCCCcCCChhHcCcHHHHHHHHHHHhhCC
Confidence 3444565 559999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEeecCCC---hhhhcCCceEEEcCCCHHHHHHHHHHHHhc------------CCCceeEEeeecceeEEEEEEcC
Q 002073 247 AVVLSTLTSKLT---KEQLSDFQAVVFTDISLDKAIEFDDFCHNH------------QPAISFIKAEVRGLFGSVFCDFG 311 (972)
Q Consensus 247 ~V~V~~~~~~l~---~e~l~~fdvVV~~~~~~~~~~~ln~~c~~~------------~~~IpfI~a~~~G~~G~vf~dfg 311 (972)
+|+|+++...++ .+++++||+||+|.++.+.+..+|+.|+.. + +|||++++.|+.|++++..+
T Consensus 109 ~v~v~~~~~~i~~~~~~~~~~~DlVi~~~Dn~~~R~~in~~c~~~~~~~~g~~~~~~~--iPli~~~~~g~~G~v~v~~p 186 (434)
T 1tt5_B 109 NCNVVPHFNKIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSI--VPLIDGGTEGFKGNARVILP 186 (434)
T ss_dssp TCCCEEEESCGGGBCHHHHTTCSEEEECCSCHHHHHHHHHHHHHTCCBSSSCBCGGGC--CCEEEEEEETTEEEEEEECT
T ss_pred CCEEEEEecccchhhHHHhcCCCEEEECCCCHHHHHHHHHHHHHhhhccccccccccC--CcEEEeccccceeEEEEECC
Confidence 999999988764 468899999999999999999999999874 8 99999999999999988764
Q ss_pred CceEEecCCCCCCcceeecccccCCCceeecccccccccccCCeeEEEeeccccccCCCCCceecccCcceeeecccccc
Q 002073 312 PEFTVVDVDGEDPHTGIIASISNDNPALVSCVDDERLEFQDGDLVVFSEVHGMTELNDGKPRKIKSARPYSFTLEEDTTN 391 (972)
Q Consensus 312 ~~f~v~d~~ge~p~~~~I~~I~~~~~~lVt~~~~~rh~~~dgd~V~f~ev~gm~eln~~~~~~I~~~~~~~f~i~~Dt~~ 391 (972)
.. .+.+. |+-+ . .| +
T Consensus 187 ~~--------t~Cy~---------------C~~~--------------------~----~p---------------~--- 201 (434)
T 1tt5_B 187 GM--------TACIE---------------CTLE--------------------L----YP---------------P--- 201 (434)
T ss_dssp TT--------SCCGG---------------GGGG--------------------G----SC---------------C---
T ss_pred CC--------CCCcc---------------cccC--------------------C----CC---------------C---
Confidence 21 01110 0000 0 00 0
Q ss_pred ccceeecceEEEeecCeeecccchhhhhcCCCccccccCccCCCCChHHHHHHHHHH-HHHHhCCC---CC-CCChhhHH
Q 002073 392 YGTYVKGGIVTQVKQPKVLNFKPLREALEDPGDFLLSDFSKFDRPPPLHLAFQALDK-FVSELGRF---PV-AGSEEDAQ 466 (972)
Q Consensus 392 f~~y~~gG~~~qvk~pk~i~fksL~e~l~~p~~~l~~d~~k~~r~~~lh~~~~aL~~-F~~~~grl---P~-~~~~~Da~ 466 (972)
+.....++++. .| + ..-|.+..|..- |...+..- +- ..+.++.+
T Consensus 202 ---------------~~~~p~Ct~~~---~p------------~-~~~h~i~~a~~i~~~~~~~~~~~~~~d~d~~~~~~ 250 (434)
T 1tt5_B 202 ---------------QVNFPMCTIAS---MP------------R-LPEHCIEYVRMLQWPKEQPFGEGVPLDGDDPEHIQ 250 (434)
T ss_dssp ---------------CCCCCHHHHHH---CC------------C-SHHHHHHHHHHTHHHHSCTTCTTCCCCTTCHHHHH
T ss_pred ---------------cCCCccccccc---CC------------c-chhHHHHHHHHHHHhhhcccccccccCCCcHHHHH
Confidence 00000011111 11 1 112333333222 22222111 11 12356777
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhhcccccCchhhHhhhhhhhhHhhhhcCCccccceeeEeeeccCC
Q 002073 467 KLISVATNINESLGDGRVEDINTKLLRHFAFGARAVLNPMAAMFGGIVGQEVVKACSGKFHPLYQFFYFDSVESL 541 (972)
Q Consensus 467 ~l~~la~~i~~~~~~~~~~~ide~lv~~~a~~~~~el~PvaA~iGGiaAQEVIKaiTgKf~PI~q~~yfD~~e~L 541 (972)
.+.+.+++..+..+. ..++...++.++....+.++|++|++||+.|||+||++||+..|+++++.||+....
T Consensus 251 ~v~~~a~~~~~~~gi---~~~~~~~~~gv~~~iipaia~t~aiig~l~a~EaiK~l~g~~~~l~~~l~~d~~~~~ 322 (434)
T 1tt5_B 251 WIFQKSLERASQYNI---RGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAYIPLNNYLVFNDVDGL 322 (434)
T ss_dssp HHHHHHHHHHHHTTC---CCCCHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTCSCCCCSEEEEECSBSC
T ss_pred HHHHHHHHHHHHcCC---CccCHHHHHhHhhccCcccccHHHHHHHHHHHHHHHHHhCCCcccCceEEEEcCCCc
Confidence 788888888777753 345777888888888889999999999999999999999999999999999998765
No 10
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=100.00 E-value=6.4e-34 Score=311.89 Aligned_cols=165 Identities=25% Similarity=0.417 Sum_probs=127.2
Q ss_pred cCchhhhhhh--cCH-HHHHHHhcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcc
Q 002073 555 NSRYDAQISV--FGA-KLQKKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNI 631 (972)
Q Consensus 555 ~~RYdrqi~l--~G~-~~q~kL~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dV 631 (972)
+--|+|||.+ ||. ++|++|+++||+||||||+||+++++|+++|| |+|+|+|+|+||.|||+||| |+..||
T Consensus 13 ~~~y~r~i~L~~~G~~~~q~kL~~~~VlVvGaGGlGs~va~~La~aGV-----G~i~lvD~D~Ve~sNL~Rq~-~~~~di 86 (292)
T 3h8v_A 13 GLVPRGSMALKRMGIVSDYEKIRTFAVAIVGVGGVGSVTAEMLTRCGI-----GKLLLFDYDKVELANMNRLF-FQPHQA 86 (292)
T ss_dssp -------------------CGGGGCEEEEECCSHHHHHHHHHHHHHTC-----SEEEEECCCBC-------------CCT
T ss_pred CCCchHhhcccccChHHHHHHHhCCeEEEECcCHHHHHHHHHHHHcCC-----CEEEEECCCccChhhccccc-CChhhc
Confidence 4579999988 998 89999999999999999999999999999999 99999999999999999996 689999
Q ss_pred cccHHHHHHHHHHhhCCCcEEEEeecccCCCcccccchhcc-----------CCCcEEEEccCChHHHHHHhhhhhcccc
Q 002073 632 GQAKSTVAASAATSINPRLNIEALQNRVGPETENVFDDTFW-----------ENITCVINALDNVNARLYVDQRCLYFQK 700 (972)
Q Consensus 632 Gk~Ks~vaa~~l~~inP~~~I~~~~~~v~~~~e~i~~~~f~-----------~~~DvVi~alDn~~aR~~v~~~c~~~~k 700 (972)
|++|+++++++++++||+++|+++..++++.. + + +.|+ +++|+||+|+||+++|.++|+.|+.+++
T Consensus 87 G~~Ka~aa~~~L~~iNP~v~v~~~~~~l~~~~-~-~-~~~~~~~~~~~l~~~~~~DlVid~~Dn~~~R~~in~~c~~~~~ 163 (292)
T 3h8v_A 87 GLSKVQAAEHTLRNINPDVLFEVHNYNITTVE-N-F-QHFMDRISNGGLEEGKPVDLVLSCVDNFEARMTINTACNELGQ 163 (292)
T ss_dssp TSBHHHHHHHHHHHHCTTSEEEEECCCTTSHH-H-H-HHHHHHHHHBSSSTTBCCSEEEECCSSHHHHHHHHHHHHHHTC
T ss_pred CchHHHHHHHHHHhhCCCcEEEEecccCCcHH-H-H-HHHhhhhcccccccCCCCCEEEECCcchhhhhHHHHHHHHhCC
Confidence 99999999999999999999999999987521 1 1 2333 6899999999999999999999999999
Q ss_pred ceEecccCC--ccceeEEEeCcccCccCCC
Q 002073 701 PLLESGTLG--AKCNTQMVIPHLTENYGAS 728 (972)
Q Consensus 701 Pli~sgt~G--~~G~~~viip~~t~~y~~~ 728 (972)
|+|++|+.| +.|++.+++|+.|+||.|.
T Consensus 164 Pli~~gv~~~~~~Gqv~~~~pg~t~Cy~Cl 193 (292)
T 3h8v_A 164 TWMESGVSENAVSGHIQLIIPGESACFACA 193 (292)
T ss_dssp CEEEEEECTTSSEEEEEEECTTTSCCTTSS
T ss_pred CEEEeeeecceeEEEEEEECCCCCCCHhhc
Confidence 999999986 8899999999999999995
No 11
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=100.00 E-value=5.1e-33 Score=312.79 Aligned_cols=164 Identities=24% Similarity=0.386 Sum_probs=153.9
Q ss_pred cCchhhhhhhcCHHHHHHHhcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCccccc
Q 002073 555 NSRYDAQISVFGAKLQKKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQA 634 (972)
Q Consensus 555 ~~RYdrqi~l~G~~~q~kL~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~ 634 (972)
..|||||+++||.++|++|++++|+|||+||+||+++|+|+++|| |+|+|+|+|.|+.|||+|||||+.+|||++
T Consensus 16 ~~rY~Rq~~l~G~~~q~~L~~~~VlivG~GGlG~~ia~~La~~Gv-----g~itlvD~d~V~~sNL~rq~~~~~~diG~~ 90 (346)
T 1y8q_A 16 AAQYDRQIRLWGLEAQKRLRASRVLLVGLKGLGAEIAKNLILAGV-----KGLTMLDHEQVTPEDPGAQFLIRTGSVGRN 90 (346)
T ss_dssp HHHHHHHHHHHCHHHHHHHHTCEEEEECCSHHHHHHHHHHHHHTC-----SEEEEECCCBCCSSCGGGCTTSCSSCTTSB
T ss_pred HHHHHHHHHhhCHHHHHHHhCCeEEEECCCHHHHHHHHHHHHcCC-----CEEEEEECCCcchhhCCCCCccccccCcCC
Confidence 479999999999999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhCCCcEEEEeecccCCCcccccchhccCCCcEEEEccCChHHHHHHhhhhhccccceEecccCCcccee
Q 002073 635 KSTVAASAATSINPRLNIEALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLESGTLGAKCNT 714 (972)
Q Consensus 635 Ks~vaa~~l~~inP~~~I~~~~~~v~~~~e~i~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~~~kPli~sgt~G~~G~~ 714 (972)
||++++++++++||+++|+++...+.+. .+++++++|+||+|+||.++|.++++.|+.+++|+|.+|+.|+.|++
T Consensus 91 Ka~~~~~~l~~lnp~v~v~~~~~~~~~~-----~~~~~~~~dvVv~~~d~~~~r~~ln~~~~~~~ip~i~~~~~G~~G~v 165 (346)
T 1y8q_A 91 RAEASLERAQNLNPMVDVKVDTEDIEKK-----PESFFTQFDAVCLTCCSRDVIVKVDQICHKNSIKFFTGDVFGYHGYT 165 (346)
T ss_dssp HHHHHHHHHHHTCTTSEEEEECSCGGGC-----CHHHHTTCSEEEEESCCHHHHHHHHHHHHHTTCEEEEEEEEBTEEEE
T ss_pred HHHHHHHHHHhHCCCeEEEEEecccCcc-----hHHHhcCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEEeecccEEEE
Confidence 9999999999999999999999887642 25788999999999999999999999999999999999999999999
Q ss_pred EEEeCcccCccCCCC
Q 002073 715 QMVIPHLTENYGASR 729 (972)
Q Consensus 715 ~viip~~t~~y~~~~ 729 (972)
.+.++ ...|+.|..
T Consensus 166 ~~d~~-~~~~~~~~~ 179 (346)
T 1y8q_A 166 FANLG-EHEFVEEKT 179 (346)
T ss_dssp EEECS-EEEEEEECC
T ss_pred EEecC-CCCEEEcCC
Confidence 99886 466766643
No 12
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=99.98 E-value=7e-33 Score=298.67 Aligned_cols=165 Identities=31% Similarity=0.464 Sum_probs=155.3
Q ss_pred cCchhhhhhh--cCHHHHHHHhcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCccc
Q 002073 555 NSRYDAQISV--FGAKLQKKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIG 632 (972)
Q Consensus 555 ~~RYdrqi~l--~G~~~q~kL~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVG 632 (972)
..||+||+++ ||.++|++|++++|+|||+||+||+++++|+++|+ |+|+|+|.|.|+.|||+||+||+.+|||
T Consensus 6 ~~ry~Rq~~l~~~g~~~q~~l~~~~VlvvG~GglG~~va~~La~~Gv-----g~i~lvD~d~v~~sNL~Rq~l~~~~diG 80 (251)
T 1zud_1 6 FMRYSRQILLDDIALDGQQKLLDSQVLIIGLGGLGTPAALYLAGAGV-----GTLVLADDDDVHLSNLQRQILFTTEDID 80 (251)
T ss_dssp HHHTHHHHTSTTTHHHHHHHHHTCEEEEECCSTTHHHHHHHHHHTTC-----SEEEEECCCBCCGGGTTTCTTCCGGGTT
T ss_pred HHHhhhhcchhhcCHHHHHHHhcCcEEEEccCHHHHHHHHHHHHcCC-----CeEEEEeCCCcccccCCCCccCChhhCC
Confidence 3699999999 99999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred ccHHHHHHHHHHhhCCCcEEEEeecccCCCcccccchhccCCCcEEEEccCChHHHHHHhhhhhccccceEecccCCccc
Q 002073 633 QAKSTVAASAATSINPRLNIEALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLESGTLGAKC 712 (972)
Q Consensus 633 k~Ks~vaa~~l~~inP~~~I~~~~~~v~~~~e~i~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~~~kPli~sgt~G~~G 712 (972)
++|+++++++++++||+++|+++...+++++. .++++++|+||+|+||.++|..+++.|+..++|+|.+++.|+.|
T Consensus 81 ~~Ka~~~~~~l~~~np~~~v~~~~~~~~~~~~----~~~~~~~DvVi~~~d~~~~r~~l~~~~~~~~~p~i~~~~~g~~G 156 (251)
T 1zud_1 81 RPKSQVSQQRLTQLNPDIQLTALQQRLTGEAL----KDAVARADVVLDCTDNMATRQEINAACVALNTPLITASAVGFGG 156 (251)
T ss_dssp SBHHHHHHHHHHHHCTTSEEEEECSCCCHHHH----HHHHHHCSEEEECCSSHHHHHHHHHHHHHTTCCEEEEEEEBTEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEEeccCCHHHH----HHHHhcCCEEEECCCCHHHHHHHHHHHHHhCCCEEEEeccccce
Confidence 99999999999999999999999888765321 45678999999999999999999999999999999999999999
Q ss_pred eeEEEeCcc-cCccCCC
Q 002073 713 NTQMVIPHL-TENYGAS 728 (972)
Q Consensus 713 ~~~viip~~-t~~y~~~ 728 (972)
++.++.|.. ++||.|.
T Consensus 157 ~v~~~~p~~~~~c~~cl 173 (251)
T 1zud_1 157 QLMVLTPPWEQGCYRCL 173 (251)
T ss_dssp EEEEECTTCTTCCHHHH
T ss_pred EEEEEccCCCCCcEEEe
Confidence 999999987 7899884
No 13
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=99.97 E-value=9.4e-31 Score=324.61 Aligned_cols=277 Identities=19% Similarity=0.252 Sum_probs=213.2
Q ss_pred hhhccCHHHHHHh-hcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHH
Q 002073 164 QLAVYGRETMRRL-FASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQ 242 (972)
Q Consensus 164 Qi~l~G~e~q~kL-~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~ 242 (972)
.-+++|.++|+++ ++++|+|||+||+|+++||||+++|||+|+|+|.|.|+.+||+|||+++++|||++||++++++|+
T Consensus 396 ~~~~~g~~~~~~~l~~~~vlvvG~GglG~~~~~~L~~~Gvg~i~l~D~d~v~~snl~rq~~~~~~~vg~~Ka~~~~~~l~ 475 (805)
T 2nvu_B 396 PDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLN 475 (805)
T ss_dssp TTCCCCSHHHHHHHHTCCEEEECCSSHHHHHHHHHHTTTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHH
T ss_pred cccCCCHHHHHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCcEEEECCCeecccccccccccchhhcCChHHHHHHHHHH
Confidence 3456899999988 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCEEEEeecCCCh---hhhcCCceEEEcCCCHHHHHHHHHHHHh------------cCCCceeEEeeecceeEEEE
Q 002073 243 ELNNAVVLSTLTSKLTK---EQLSDFQAVVFTDISLDKAIEFDDFCHN------------HQPAISFIKAEVRGLFGSVF 307 (972)
Q Consensus 243 eLNp~V~V~~~~~~l~~---e~l~~fdvVV~~~~~~~~~~~ln~~c~~------------~~~~IpfI~a~~~G~~G~vf 307 (972)
++||+|+|+++...+++ +++++||+||+|.++.+.+..||+.|+. ++ +|+|.+++.|+.|+++
T Consensus 476 ~~np~~~v~~~~~~~~~~~~~~~~~~d~vv~~~d~~~~r~~in~~~~~~~~~~~g~~~~~~~--~p~i~~~~~g~~G~~~ 553 (805)
T 2nvu_B 476 DRVPNCNVVPHFNKIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSI--VPLIDGGTEGFKGNAR 553 (805)
T ss_dssp HHSTTCEEEEEESCGGGSCHHHHHTCSEEEECCSCHHHHHHHHHHHHHTCCEETTEECGGGC--CCEEEEEEETTEEEEE
T ss_pred HHCCCCEEEEEeccccccHHHHHhcCCEEEECCCCHHHHHHHHHHHHHHhhccccccccccC--CcEEEeccccCceeEE
Confidence 99999999999887743 6889999999999999999999999988 48 9999999999999999
Q ss_pred EEcCCceEEecCCCCCCcceeecccccCCCceeecccccccccccCCeeEEEeeccccccCCCCCceecccCcceeeecc
Q 002073 308 CDFGPEFTVVDVDGEDPHTGIIASISNDNPALVSCVDDERLEFQDGDLVVFSEVHGMTELNDGKPRKIKSARPYSFTLEE 387 (972)
Q Consensus 308 ~dfg~~f~v~d~~ge~p~~~~I~~I~~~~~~lVt~~~~~rh~~~dgd~V~f~ev~gm~eln~~~~~~I~~~~~~~f~i~~ 387 (972)
+..+.. ...+. |+-+ . .|
T Consensus 554 ~~~p~~--------~~c~~---------------c~~~---------------------~---~p--------------- 571 (805)
T 2nvu_B 554 VILPGM--------TACIE---------------CTLE---------------------L---YP--------------- 571 (805)
T ss_dssp EECTTT--------SCCTT---------------TSGG---------------------G---SC---------------
T ss_pred EECCCC--------CCcee---------------ccCC---------------------C---CC---------------
Confidence 876431 00000 0000 0 00
Q ss_pred ccccccceeecceEEEeecCeeecccchhhhhcCCCccccccCccCCCCChHHHHHHHHH-HHHHHhCCC---CC-CCCh
Q 002073 388 DTTNYGTYVKGGIVTQVKQPKVLNFKPLREALEDPGDFLLSDFSKFDRPPPLHLAFQALD-KFVSELGRF---PV-AGSE 462 (972)
Q Consensus 388 Dt~~f~~y~~gG~~~qvk~pk~i~fksL~e~l~~p~~~l~~d~~k~~r~~~lh~~~~aL~-~F~~~~grl---P~-~~~~ 462 (972)
. +.....++++. .| | ..-|.+..|.. .|..++..- +- ..+.
T Consensus 572 ~------------------~~~~~~c~~~~---~~------------~-~~~~~i~~a~~~~~~~~~~~~~~~~~d~~~~ 617 (805)
T 2nvu_B 572 P------------------QVNFPMCTIAS---MP------------R-LPEHCIEYVRMLQWPKEQPFGEGVPLDGDDP 617 (805)
T ss_dssp C------------------CCCCCHHHHHH---CC------------C-SHHHHHHHHHHTHHHHHCTTSTTCCCCTTCH
T ss_pred C------------------CCCCCccccCC---CC------------C-CccHHHHHHHHhhcccccCCCCcccCCCCCH
Confidence 0 00000112221 11 1 11122222221 123333211 11 1245
Q ss_pred hhHHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHhhcccccCchhhHhhhhhhhhHhhhhcCCccccceeeEeeeccCC
Q 002073 463 EDAQKLISVATNINESLGDGRVEDINTKLLRHFAFGARAVLNPMAAMFGGIVGQEVVKACSGKFHPLYQFFYFDSVESL 541 (972)
Q Consensus 463 ~Da~~l~~la~~i~~~~~~~~~~~ide~lv~~~a~~~~~el~PvaA~iGGiaAQEVIKaiTgKf~PI~q~~yfD~~e~L 541 (972)
++.+.+.+.++..+...+. ..++...++.++....+.++|++|++||+.|||+||++||+..|++++++||+..+.
T Consensus 618 ~~~~~~~~~~~~~~~~~gi---~~~~~~~~~~~~~~i~p~i~~~~aiig~~~a~e~ik~l~~~~~~l~~~~~~~~~~~~ 693 (805)
T 2nvu_B 618 EHIQWIFQKSLERASQYNI---RGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAYIPLNNYLVFNDVDGL 693 (805)
T ss_dssp HHHHHHHHHHHHHHHHTTC---CCCCHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHCSSCCCCSEEEEECSBSC
T ss_pred HHHHHHHHHHHHHHHHhCC---CCcCHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHhccccccCceEEecCCCCc
Confidence 6777888888888777753 345777888999888899999999999999999999999999999999999998765
No 14
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=99.97 E-value=1.5e-31 Score=287.93 Aligned_cols=164 Identities=30% Similarity=0.448 Sum_probs=154.2
Q ss_pred Cchhhhhhh--cCHHHHHHHhcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccc
Q 002073 556 SRYDAQISV--FGAKLQKKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQ 633 (972)
Q Consensus 556 ~RYdrqi~l--~G~~~q~kL~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk 633 (972)
.||+||+++ ||.++|++|++++|+|||+||+|++++++|+++|+ |+|+|+|.|.||.|||+||+||+.+|||+
T Consensus 10 ~ry~Rq~~l~~~g~~~q~~l~~~~VlVvG~Gg~G~~va~~La~~Gv-----~~i~lvD~d~v~~sNl~Rq~l~~~~diG~ 84 (249)
T 1jw9_B 10 LRYNRQIILRGFDFDGQEALKDSRVLIVGLGGLGCAASQYLASAGV-----GNLTLLDFDTVSLSNLQRQTLHSDATVGQ 84 (249)
T ss_dssp HHTHHHHTSTTTHHHHHHHHHHCEEEEECCSHHHHHHHHHHHHHTC-----SEEEEECCCBCCGGGGGTCTTCCGGGTTS
T ss_pred HHhhheecccccCHHHHHHHhCCeEEEEeeCHHHHHHHHHHHHcCC-----CeEEEEcCCCcccccCCcccccChhhcCc
Confidence 699999999 99999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred cHHHHHHHHHHhhCCCcEEEEeecccCCCcccccchhccCCCcEEEEccCChHHHHHHhhhhhccccceEecccCCccce
Q 002073 634 AKSTVAASAATSINPRLNIEALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLESGTLGAKCN 713 (972)
Q Consensus 634 ~Ks~vaa~~l~~inP~~~I~~~~~~v~~~~e~i~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~~~kPli~sgt~G~~G~ 713 (972)
+|++++++++.++||+++|+++..++++++ + .++++++|+||+|+||.++|..+++.|+..++|+|+++..|+.|+
T Consensus 85 ~Ka~~~~~~l~~~np~~~v~~~~~~~~~~~--~--~~~~~~~DvVi~~~d~~~~~~~l~~~~~~~~~p~i~~~~~g~~g~ 160 (249)
T 1jw9_B 85 PKVESARDALTRINPHIAITPVNALLDDAE--L--AALIAEHDLVLDCTDNVAVRNQLNAGCFAAKVPLVSGAAIRMEGQ 160 (249)
T ss_dssp BHHHHHHHHHHHHCTTSEEEEECSCCCHHH--H--HHHHHTSSEEEECCSSHHHHHHHHHHHHHHTCCEEEEEEEBTEEE
T ss_pred HHHHHHHHHHHHHCCCcEEEEEeccCCHhH--H--HHHHhCCCEEEEeCCCHHHHHHHHHHHHHcCCCEEEeeeccceEE
Confidence 999999999999999999999988776422 1 356789999999999999999999999999999999999999999
Q ss_pred eEEEeCcc-cCccCCC
Q 002073 714 TQMVIPHL-TENYGAS 728 (972)
Q Consensus 714 ~~viip~~-t~~y~~~ 728 (972)
+.++.|.. ++||.|.
T Consensus 161 v~~~~p~~~~~c~~c~ 176 (249)
T 1jw9_B 161 ITVFTYQDGEPCYRCL 176 (249)
T ss_dssp EEEECCCTTCCCTHHH
T ss_pred EEEEeCCCCCCceEEE
Confidence 99998987 6899883
No 15
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=99.97 E-value=1.1e-30 Score=294.61 Aligned_cols=166 Identities=25% Similarity=0.437 Sum_probs=152.1
Q ss_pred cCchhhhhh---hcC--HHH-HHHHhcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCccccccc
Q 002073 555 NSRYDAQIS---VFG--AKL-QKKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRD 628 (972)
Q Consensus 555 ~~RYdrqi~---l~G--~~~-q~kL~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~ 628 (972)
..||+||+. +|| .+. |++|++++|+|||+||+||+++++|+++|| |+|+|+|.|.|+.|||+||+||+.
T Consensus 92 ~~rY~Rq~~~~~~~g~~~~~~q~~L~~~~VlvvG~GglGs~va~~La~aGv-----g~i~lvD~D~Ve~sNL~Rq~l~~~ 166 (353)
T 3h5n_A 92 NNRYSRNFLHYQSYGANPVLVQDKLKNAKVVILGCGGIGNHVSVILATSGI-----GEIILIDNDQIENTNLTRQVLFSE 166 (353)
T ss_dssp TSTTHHHHHHHHHTTCCHHHHHHHHHTCEEEEECCSHHHHHHHHHHHHHTC-----SEEEEEECCBCCGGGGGTCTTCCG
T ss_pred HHHhhhhhhhhhccCCChHHHHHHHhCCeEEEECCCHHHHHHHHHHHhCCC-----CeEEEECCCcCcccccccccCCCh
Confidence 479999986 466 455 999999999999999999999999999999 999999999999999999999999
Q ss_pred CcccccHHHHHHHHHHhhCCCcEEEEeecccCCCcccccchhccCCCcEEEEccCChH-HHHHHhhhhhccccceEeccc
Q 002073 629 WNIGQAKSTVAASAATSINPRLNIEALQNRVGPETENVFDDTFWENITCVINALDNVN-ARLYVDQRCLYFQKPLLESGT 707 (972)
Q Consensus 629 ~dVGk~Ks~vaa~~l~~inP~~~I~~~~~~v~~~~e~i~~~~f~~~~DvVi~alDn~~-aR~~v~~~c~~~~kPli~sgt 707 (972)
.|||++|+++++++++++||+++|+++..++++++. . .. ++++|+||+|+||+. +|.++++.|+..++|+|.+|+
T Consensus 167 ~diG~~Ka~~~~~~l~~~np~v~v~~~~~~i~~~~~--~-~~-~~~~DlVvd~~Dn~~~~r~~ln~~c~~~~~p~i~~~~ 242 (353)
T 3h5n_A 167 DDVGKNKTEVIKRELLKRNSEISVSEIALNINDYTD--L-HK-VPEADIWVVSADHPFNLINWVNKYCVRANQPYINAGY 242 (353)
T ss_dssp GGTTSBHHHHHHHHHHHHCTTSEEEEEECCCCSGGG--G-GG-SCCCSEEEECCCCSTTHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHCCChHHHHHHHHHHHHCCCCeEEEeecccCchhh--h-hH-hccCCEEEEecCChHHHHHHHHHHHHHhCCCEEEEEE
Confidence 999999999999999999999999999999886542 2 23 789999999999999 999999999999999999999
Q ss_pred CCccceeE-EEeCcccCccCCCC
Q 002073 708 LGAKCNTQ-MVIPHLTENYGASR 729 (972)
Q Consensus 708 ~G~~G~~~-viip~~t~~y~~~~ 729 (972)
.|..|.+- +++|+.|+||.|..
T Consensus 243 ~g~~g~~g~~~~p~~~~C~~C~~ 265 (353)
T 3h5n_A 243 VNDIAVFGPLYVPGKTGCYECQK 265 (353)
T ss_dssp ETTEEEEEEEECTTTSCCTTTTC
T ss_pred eCCEEEEEEEEcCCCCCChhhcC
Confidence 99999864 45799999999953
No 16
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=99.96 E-value=1.2e-29 Score=273.30 Aligned_cols=152 Identities=27% Similarity=0.406 Sum_probs=145.3
Q ss_pred hhhHhhhhhhhhc--cCHHHHHHhhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCch
Q 002073 155 DIDEDLHSRQLAV--YGRETMRRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKN 232 (972)
Q Consensus 155 ~~d~~~YsRQi~l--~G~e~q~kL~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~ 232 (972)
+.+.+||+||+++ ||.++|++|++++|+|+|+||+|+++|++|+++||++|+|+|.|.|+++||+|||+++++|||++
T Consensus 3 ~~e~~ry~Rq~~l~~~g~~~q~~l~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~ 82 (251)
T 1zud_1 3 DRDFMRYSRQILLDDIALDGQQKLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRP 82 (251)
T ss_dssp HHHHHHTHHHHTSTTTHHHHHHHHHTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSB
T ss_pred HHHHHHhhhhcchhhcCHHHHHHHhcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCH
Confidence 4566899999999 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeecCCCh----hhhcCCceEEEcCCCHHHHHHHHHHHHhcCCCceeEEeeecceeEEEEE
Q 002073 233 RALASVQKLQELNNAVVLSTLTSKLTK----EQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIKAEVRGLFGSVFC 308 (972)
Q Consensus 233 RAea~~~~L~eLNp~V~V~~~~~~l~~----e~l~~fdvVV~~~~~~~~~~~ln~~c~~~~~~IpfI~a~~~G~~G~vf~ 308 (972)
||++++++|+++||+++|+++...+++ ++++++|+||.|.++.+.+..++++|++++ +|||.+++.|+.|++++
T Consensus 83 Ka~~~~~~l~~~np~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~d~~~~r~~l~~~~~~~~--~p~i~~~~~g~~G~v~~ 160 (251)
T 1zud_1 83 KSQVSQQRLTQLNPDIQLTALQQRLTGEALKDAVARADVVLDCTDNMATRQEINAACVALN--TPLITASAVGFGGQLMV 160 (251)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECSCCCHHHHHHHHHHCSEEEECCSSHHHHHHHHHHHHHTT--CCEEEEEEEBTEEEEEE
T ss_pred HHHHHHHHHHHHCCCCEEEEEeccCCHHHHHHHHhcCCEEEECCCCHHHHHHHHHHHHHhC--CCEEEEeccccceEEEE
Confidence 999999999999999999999888765 367789999999999999999999999999 99999999999999986
No 17
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=99.96 E-value=3e-29 Score=298.70 Aligned_cols=147 Identities=20% Similarity=0.331 Sum_probs=138.9
Q ss_pred hhhccCHHHHHHhhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHH
Q 002073 164 QLAVYGRETMRRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQE 243 (972)
Q Consensus 164 Qi~l~G~e~q~kL~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~e 243 (972)
|+++||.++|++|++++|+|||+||+|+++||||+++|||+|+|+|.|.|+.+||+|||+++++|||++||++++++|++
T Consensus 3 qi~l~G~e~Q~kL~~s~VlVVGaGGLGsevak~La~aGVG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~ 82 (640)
T 1y8q_B 3 LSRGLPRELAEAVAGGRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQ 82 (640)
T ss_dssp ---CCCHHHHHHHHHCEEEEECCSHHHHHHHHHHHHHTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHT
T ss_pred hhhhcCHHHHHHHhcCeEEEECcCHHHHHHHHHHHHcCCCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCEEEEeecCCC-----hhhhcCCceEEEcCCCHHHHHHHHHHHHhcCCCceeEEeeecceeEEEEEEcCC
Q 002073 244 LNNAVVLSTLTSKLT-----KEQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIKAEVRGLFGSVFCDFGP 312 (972)
Q Consensus 244 LNp~V~V~~~~~~l~-----~e~l~~fdvVV~~~~~~~~~~~ln~~c~~~~~~IpfI~a~~~G~~G~vf~dfg~ 312 (972)
+||+|+|+++...++ .+++.+||+||+|.++.+.+..+|++|++++ +|||.+++.|+.|++++..+.
T Consensus 83 iNP~v~V~a~~~~i~~~~~~~~~~~~~DlVvda~Dn~~aR~~ln~~c~~~~--iPlI~~g~~G~~G~v~vi~p~ 154 (640)
T 1y8q_B 83 FYPKANIVAYHDSIMNPDYNVEFFRQFILVMNALDNRAARNHVNRMCLAAD--VPLIESGTAGYLGQVTTIKKG 154 (640)
T ss_dssp TCTTCEEEEEESCTTSTTSCHHHHTTCSEEEECCSCHHHHHHHHHHHHHHT--CCEEEEEEETTEEEEEEECTT
T ss_pred HCCCCeEEEEecccchhhhhHhhhcCCCEEEECCCCHHHHHHHHHHHHHcC--CCEEEEEEecccceEEEECCC
Confidence 999999999988774 3678999999999999999999999999999 999999999999999998754
No 18
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=99.96 E-value=7e-30 Score=284.30 Aligned_cols=160 Identities=19% Similarity=0.240 Sum_probs=142.3
Q ss_pred hhcCHHHHHHHhcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHH
Q 002073 563 SVFGAKLQKKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASA 642 (972)
Q Consensus 563 ~l~G~~~q~kL~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~ 642 (972)
|+|+..++++|+++||+||||||+||+++++|+++|| |+|+|+|.|+|+.|||+||+||+..|||++|+++++++
T Consensus 22 Rll~~~g~~kL~~~~VlIvGaGGlGs~va~~La~aGV-----g~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~ 96 (340)
T 3rui_A 22 RILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGV-----RKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAAS 96 (340)
T ss_dssp HTCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHHTTC-----CEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHH
T ss_pred hhcchhhHHHHhCCEEEEECCCHHHHHHHHHHHHcCC-----CEEEEecCCEeccccccccccCChhhcChHHHHHHHHH
Confidence 6788778899999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred HHhhCCCcEEEEeecccCCCc-------cccc----chhccCCCcEEEEccCChHHHHHHhhhhhccccceEecccCCcc
Q 002073 643 ATSINPRLNIEALQNRVGPET-------ENVF----DDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLESGTLGAK 711 (972)
Q Consensus 643 l~~inP~~~I~~~~~~v~~~~-------e~i~----~~~f~~~~DvVi~alDn~~aR~~v~~~c~~~~kPli~sgt~G~~ 711 (972)
++++||+++|+++...+.... ...+ -.++++++|+||+|+||+++|.++++.|+.+++|+|+++ .|+.
T Consensus 97 L~~inP~v~v~~~~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tDn~~tR~lin~~c~~~~~plI~aa-~G~~ 175 (340)
T 3rui_A 97 LKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRESRWLPSLLSNIENKTVINAA-LGFD 175 (340)
T ss_dssp HHHHCTTCEEEEECCCCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSTGGGHHHHHHHHHTTCEEEEEE-ECSS
T ss_pred HHHhCCCCEEEEEeccccccCcccchhhhhcCCHHHHHhhhccCCEEEecCCCHHHHHHHHHHHHHcCCcEEEee-ecce
Confidence 999999999999987652100 0000 146788999999999999999999999999999999876 9999
Q ss_pred ceeEEEe-------CcccCccCCC
Q 002073 712 CNTQMVI-------PHLTENYGAS 728 (972)
Q Consensus 712 G~~~vii-------p~~t~~y~~~ 728 (972)
|++.++. |..++||.|.
T Consensus 176 G~l~v~~g~~~~~~~~~~~Cy~C~ 199 (340)
T 3rui_A 176 SYLVMRHGNRDEQSSKQLGCYFCH 199 (340)
T ss_dssp EEEEEECCCCCSSCCCCBCCGGGG
T ss_pred EEEEEeecccccCCCCCCCeeeeC
Confidence 9997763 5678999995
No 19
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=99.96 E-value=5.9e-30 Score=319.60 Aligned_cols=184 Identities=22% Similarity=0.324 Sum_probs=162.6
Q ss_pred cCchhhhhhhcCHHHHHHHhcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCccccc
Q 002073 555 NSRYDAQISVFGAKLQKKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQA 634 (972)
Q Consensus 555 ~~RYdrqi~l~G~~~q~kL~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~ 634 (972)
..||+||+++||.++|++|++++|+|||+||+||++||+|+++|| |+|+|+|.|.|+.|||+||||++..|||++
T Consensus 7 ~~rY~Rqi~l~G~~~q~rL~~s~VlIvG~GGlGseiak~La~aGV-----g~itlvD~D~V~~sNL~RQ~l~~~~dvG~~ 81 (1015)
T 3cmm_A 7 ESLYSRQLYVLGKEAMLKMQTSNVLILGLKGLGVEIAKNVVLAGV-----KSMTVFDPEPVQLADLSTQFFLTEKDIGQK 81 (1015)
T ss_dssp HHHHHHHHHHSCHHHHHHHTTCEEEEECCSHHHHHHHHHHHHHCC-----SEEEEECCSBCCGGGGGTCTTCCGGGTTSB
T ss_pred hHhccchHhhcCHHHHHHHhcCEEEEECCChHHHHHHHHHHHcCC-----CeEEEecCCEechhhhccccccChhhcChH
Confidence 479999999999999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhCCCcEEEEeecccCCCcccccchhccCCCcEEEEccC-ChHHHHHHhhhhhccccceEecccCCccce
Q 002073 635 KSTVAASAATSINPRLNIEALQNRVGPETENVFDDTFWENITCVINALD-NVNARLYVDQRCLYFQKPLLESGTLGAKCN 713 (972)
Q Consensus 635 Ks~vaa~~l~~inP~~~I~~~~~~v~~~~e~i~~~~f~~~~DvVi~alD-n~~aR~~v~~~c~~~~kPli~sgt~G~~G~ 713 (972)
||++++++|+++||+++|+++...+++ ++++++|+||+|.| |..+|..++++|+..++|+|.+++.|+.|+
T Consensus 82 Ka~a~~~~L~~lNP~v~v~~~~~~l~~--------~~l~~~DvVv~~~d~~~~~r~~ln~~c~~~~iplI~~~~~G~~G~ 153 (1015)
T 3cmm_A 82 RGDVTRAKLAELNAYVPVNVLDSLDDV--------TQLSQFQVVVATDTVSLEDKVKINEFCHSSGIRFISSETRGLFGN 153 (1015)
T ss_dssp HHHHHHHHHTTSCTTSCEEECCCCCCS--------TTGGGCSEEEECTTSCHHHHHHHHHHHHHHTCEEEEEEEETTEEE
T ss_pred HHHHHHHHHHHHCCCCeEEEecCCCCH--------HHHhcCCEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEEecccEEE
Confidence 999999999999999999999887743 46789999999999 999999999999999999999999999999
Q ss_pred eEEEeCcccCccCCCC-CC-CCCCCCCccccCCCCChhhHHHHHH
Q 002073 714 TQMVIPHLTENYGASR-DP-PEKQAPMCTVHSFPHNIDHCLTWAR 756 (972)
Q Consensus 714 ~~viip~~t~~y~~~~-dp-~~~~~p~Ctl~~fP~~~~h~i~wAr 756 (972)
+.+. ..+||.|.. ++ +..++..|++ +-| .+.||+.|-|
T Consensus 154 v~~d---~~~~~~c~~~~~~~p~~~~i~~i-~~p-~~v~~l~~~~ 193 (1015)
T 3cmm_A 154 TFVD---LGDEFTVLDPTGEEPRTGMVSDI-EPD-GTVTMLDDNR 193 (1015)
T ss_dssp EEEE---CCSCEEESBSSCCCCCEEEEEEE-CTT-CEEEESTTCC
T ss_pred EEec---CCCceEEeeCCCCCCccccccCC-CCC-ceeEeeeccc
Confidence 8653 467898843 22 2234556666 334 3577876644
No 20
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=99.95 E-value=4.6e-28 Score=260.75 Aligned_cols=154 Identities=19% Similarity=0.316 Sum_probs=146.0
Q ss_pred CChhhHhhhhhhhhc--cCHHHHHHhhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccC
Q 002073 153 QTDIDEDLHSRQLAV--YGRETMRRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIG 230 (972)
Q Consensus 153 ~~~~d~~~YsRQi~l--~G~e~q~kL~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIG 230 (972)
.++.+.+||+||+++ ||.++|++|++++|+|+|+||+|+++|++|+++||++|+|+|.|.|+++||+||++++++|||
T Consensus 4 l~~~e~~ry~Rq~~l~~~g~~~q~~l~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG 83 (249)
T 1jw9_B 4 LSDQEMLRYNRQIILRGFDFDGQEALKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVG 83 (249)
T ss_dssp CCHHHHHHTHHHHTSTTTHHHHHHHHHHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTT
T ss_pred CCHHHHHHhhheecccccCHHHHHHHhCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcC
Confidence 345666899999999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHhcCCCEEEEeecCCCh----hhhcCCceEEEcCCCHHHHHHHHHHHHhcCCCceeEEeeecceeEEE
Q 002073 231 KNRALASVQKLQELNNAVVLSTLTSKLTK----EQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIKAEVRGLFGSV 306 (972)
Q Consensus 231 k~RAea~~~~L~eLNp~V~V~~~~~~l~~----e~l~~fdvVV~~~~~~~~~~~ln~~c~~~~~~IpfI~a~~~G~~G~v 306 (972)
++||++++++|+++||.++|+++...+++ +++.++|+||+|.++.+.+..++++|++.+ +|+|.+++.|+.|++
T Consensus 84 ~~Ka~~~~~~l~~~np~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~d~~~~~~~l~~~~~~~~--~p~i~~~~~g~~g~v 161 (249)
T 1jw9_B 84 QPKVESARDALTRINPHIAITPVNALLDDAELAALIAEHDLVLDCTDNVAVRNQLNAGCFAAK--VPLVSGAAIRMEGQI 161 (249)
T ss_dssp SBHHHHHHHHHHHHCTTSEEEEECSCCCHHHHHHHHHTSSEEEECCSSHHHHHHHHHHHHHHT--CCEEEEEEEBTEEEE
T ss_pred cHHHHHHHHHHHHHCCCcEEEEEeccCCHhHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHHcC--CCEEEeeeccceEEE
Confidence 99999999999999999999998887764 367899999999999999999999999999 999999999999999
Q ss_pred EE
Q 002073 307 FC 308 (972)
Q Consensus 307 f~ 308 (972)
++
T Consensus 162 ~~ 163 (249)
T 1jw9_B 162 TV 163 (249)
T ss_dssp EE
T ss_pred EE
Confidence 75
No 21
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=99.95 E-value=4.4e-28 Score=265.73 Aligned_cols=149 Identities=17% Similarity=0.287 Sum_probs=114.4
Q ss_pred hhhhhhhhc--cCH-HHHHHhhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHH
Q 002073 159 DLHSRQLAV--YGR-ETMRRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRAL 235 (972)
Q Consensus 159 ~~YsRQi~l--~G~-e~q~kL~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAe 235 (972)
--|+|||.+ ||. ++|+||++++|+|+|+||+|+++|++|+++|||+|+|+|.|.|+++||+|||| +++|||++||+
T Consensus 14 ~~y~r~i~L~~~G~~~~q~kL~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~-~~~diG~~Ka~ 92 (292)
T 3h8v_A 14 LVPRGSMALKRMGIVSDYEKIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFF-QPHQAGLSKVQ 92 (292)
T ss_dssp ------------------CGGGGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC-------------CCTTSBHHH
T ss_pred CCchHhhcccccChHHHHHHHhCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccC-ChhhcCchHHH
Confidence 359999999 998 99999999999999999999999999999999999999999999999999975 88999999999
Q ss_pred HHHHHHHHhcCCCEEEEeecCCCh-h----hh-----------cCCceEEEcCCCHHHHHHHHHHHHhcCCCceeEEeee
Q 002073 236 ASVQKLQELNNAVVLSTLTSKLTK-E----QL-----------SDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIKAEV 299 (972)
Q Consensus 236 a~~~~L~eLNp~V~V~~~~~~l~~-e----~l-----------~~fdvVV~~~~~~~~~~~ln~~c~~~~~~IpfI~a~~ 299 (972)
+++++|+++||+|+|+++...+++ + ++ ++||+||+|.|+.+.+..||++|++++ +|||++++
T Consensus 93 aa~~~L~~iNP~v~v~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn~~~R~~in~~c~~~~--~Pli~~gv 170 (292)
T 3h8v_A 93 AAEHTLRNINPDVLFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEARMTINTACNELG--QTWMESGV 170 (292)
T ss_dssp HHHHHHHHHCTTSEEEEECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCSSHHHHHHHHHHHHHHT--CCEEEEEE
T ss_pred HHHHHHHhhCCCcEEEEecccCCcHHHHHHHhhhhcccccccCCCCCEEEECCcchhhhhHHHHHHHHhC--CCEEEeee
Confidence 999999999999999999988864 2 33 689999999999999999999999999 99999999
Q ss_pred cc--eeEEEEEEc
Q 002073 300 RG--LFGSVFCDF 310 (972)
Q Consensus 300 ~G--~~G~vf~df 310 (972)
.| +.|++.+..
T Consensus 171 ~~~~~~Gqv~~~~ 183 (292)
T 3h8v_A 171 SENAVSGHIQLII 183 (292)
T ss_dssp CTTSSEEEEEEEC
T ss_pred ecceeEEEEEEEC
Confidence 76 889887644
No 22
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=99.95 E-value=1.3e-28 Score=290.22 Aligned_cols=165 Identities=19% Similarity=0.282 Sum_probs=145.5
Q ss_pred Cchhhhhhh-------cCHHHHHHHhcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCccccccc
Q 002073 556 SRYDAQISV-------FGAKLQKKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRD 628 (972)
Q Consensus 556 ~RYdrqi~l-------~G~~~q~kL~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~ 628 (972)
.||+||+++ ++..+|++|+++||+||||||+||+++++|+++|| |+|+|+|+|+||.|||+||+||+.
T Consensus 301 a~~~~~lnL~lmrwrll~~~gq~kL~~~kVLIVGaGGLGs~va~~La~aGV-----G~ItLvD~D~Ve~SNL~RQ~L~~~ 375 (598)
T 3vh1_A 301 ADQSVDLNLKLMKWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGV-----RKITFVDNGTVSYSNPVRQALYNF 375 (598)
T ss_dssp HHHHHHHHHHHHHHHHCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHTTTC-----CEEEEECCSBCCTTSTTTSTTCCS
T ss_pred HHHHHhhhhhhhhhhccchhhHHHHhCCeEEEECCCHHHHHHHHHHHHcCC-----CEEEEECCCcccccccccccccch
Confidence 589988886 56667899999999999999999999999999999 999999999999999999999999
Q ss_pred CcccccHHHHHHHHHHhhCCCcEEEEeecccC-------CC-----c-ccccchhccCCCcEEEEccCChHHHHHHhhhh
Q 002073 629 WNIGQAKSTVAASAATSINPRLNIEALQNRVG-------PE-----T-ENVFDDTFWENITCVINALDNVNARLYVDQRC 695 (972)
Q Consensus 629 ~dVGk~Ks~vaa~~l~~inP~~~I~~~~~~v~-------~~-----~-e~i~~~~f~~~~DvVi~alDn~~aR~~v~~~c 695 (972)
+|||++||++|+++++++||+++|+++..++. .+ + +++ +++++++|+||+|+||+++|.++++.|
T Consensus 376 ~DvG~~KAeaaa~~L~~iNP~v~v~~~~~~I~~pgh~i~~~~~~~l~~~~l--~~li~~~DvVvdatDn~~tR~lin~~c 453 (598)
T 3vh1_A 376 EDCGKPKAELAAASLKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRL--RALIKEHDIIFLLVDSRESRWLPSLLS 453 (598)
T ss_dssp TTCSSBHHHHHHHHHHHHCTTCEEEEECCCCCCSSCCCCSHHHHHHHHHHH--HHHHHHCSEEEECCSBGGGTHHHHHHH
T ss_pred hhcCcHHHHHHHHHHHhHCCCcEEEEEeccccccCcccccccccccCHHHH--HHHHhcCCEEEECCCCHHHHHHHHHHH
Confidence 99999999999999999999999999998762 10 0 111 457789999999999999999999999
Q ss_pred hccccceEecccCCccceeEEEe---C----cccCccCCC
Q 002073 696 LYFQKPLLESGTLGAKCNTQMVI---P----HLTENYGAS 728 (972)
Q Consensus 696 ~~~~kPli~sgt~G~~G~~~vii---p----~~t~~y~~~ 728 (972)
+.+++|+|++ +.|+.|++.++- | ..++||.|.
T Consensus 454 ~~~~~plI~a-a~G~~Gqv~v~~g~~p~~~~~~~~Cy~Cl 492 (598)
T 3vh1_A 454 NIENKTVINA-ALGFDSYLVMRHGNRDEQSSKQLGCYFCH 492 (598)
T ss_dssp HHTTCEEEEE-EECSSEEEEEEEC--------CBCCTTTS
T ss_pred HhcCCCEEEE-EECCccEEEEEccCCCccCCCCCCceeec
Confidence 9999999985 689999887653 3 357899995
No 23
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=99.95 E-value=1.9e-28 Score=288.63 Aligned_cols=160 Identities=19% Similarity=0.259 Sum_probs=141.6
Q ss_pred hhcCHHHHHHHhcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHH
Q 002073 563 SVFGAKLQKKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASA 642 (972)
Q Consensus 563 ~l~G~~~q~kL~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~ 642 (972)
|+++..++++|+++||+||||||+||+++++|+++|| |+|+|+|+|+|+.|||+||+||+.+|||++|+++|+++
T Consensus 314 Rllp~~g~ekL~~arVLIVGaGGLGs~vA~~La~aGV-----G~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~ 388 (615)
T 4gsl_A 314 RILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGV-----RKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAAS 388 (615)
T ss_dssp HTCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHHTTC-----CEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHH
T ss_pred hhcchhhHHHHhCCeEEEECCCHHHHHHHHHHHHcCC-----CEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHH
Confidence 5678888899999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred HHhhCCCcEEEEeecccC-------CCccccc----chhccCCCcEEEEccCChHHHHHHhhhhhccccceEecccCCcc
Q 002073 643 ATSINPRLNIEALQNRVG-------PETENVF----DDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLESGTLGAK 711 (972)
Q Consensus 643 l~~inP~~~I~~~~~~v~-------~~~e~i~----~~~f~~~~DvVi~alDn~~aR~~v~~~c~~~~kPli~sgt~G~~ 711 (972)
++++||+++|+++...+. ++....+ ..++++++|+||+|+||.++|.++++.|+.+++|+|+++ .|+.
T Consensus 389 L~~iNP~V~v~~~~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tDn~~tR~~ln~~c~~~~~PlI~aa-lG~~ 467 (615)
T 4gsl_A 389 LKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRESRWLPSLLSNIENKTVINAA-LGFD 467 (615)
T ss_dssp HHHHCTTCEEEEECCCCCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSGGGTHHHHHHHHHTTCEEEEEE-ECSS
T ss_pred HHhhCCCcEEEEeeccccccCccccchhhhcCCHHHHHHHhhcCCEEEecCCCHHHHHHHHHHHHHcCCeEEEEE-ccce
Confidence 999999999999986652 1000001 135788999999999999999999999999999999976 9999
Q ss_pred ceeEEEe-------CcccCccCCC
Q 002073 712 CNTQMVI-------PHLTENYGAS 728 (972)
Q Consensus 712 G~~~vii-------p~~t~~y~~~ 728 (972)
|++.++- |..++||.|.
T Consensus 468 Gql~v~~g~~~~~~~~~~~CY~Cl 491 (615)
T 4gsl_A 468 SYLVMRHGNRDEQSSKQLGCYFCH 491 (615)
T ss_dssp EEEEEECCC------CCCCCTTTS
T ss_pred eEEEEeecccccCCCCCCCceeeC
Confidence 9987653 4678999995
No 24
>2v31_A Ubiquitin-activating enzyme E1 X; ligase, phosphorylation, catalytic domain, heteronuclear first catalytic cysteine half-domain, E1 protein; NMR {Mus musculus}
Probab=99.95 E-value=7.1e-29 Score=233.33 Aligned_cols=111 Identities=44% Similarity=0.879 Sum_probs=109.0
Q ss_pred EcCCceEEecCCCCCCcceeecccccCCCceeecccccccccccCCeeEEEeeccccccCCCCCceecccCcceeeeccc
Q 002073 309 DFGPEFTVVDVDGEDPHTGIIASISNDNPALVSCVDDERLEFQDGDLVVFSEVHGMTELNDGKPRKIKSARPYSFTLEED 388 (972)
Q Consensus 309 dfg~~f~v~d~~ge~p~~~~I~~I~~~~~~lVt~~~~~rh~~~dgd~V~f~ev~gm~eln~~~~~~I~~~~~~~f~i~~D 388 (972)
|||++|+|.|++||+|.+++|++|+++.+++|+|+++.||+|+|||+|+|+||+||++||+++|++|++++||+|+| +|
T Consensus 1 DFG~~F~V~D~dGE~p~~~~I~~Is~~~~g~Vt~~~~~~H~l~dGD~V~FseV~GM~eLN~~~p~~i~v~~p~tf~I-~d 79 (112)
T 2v31_A 1 EFGEEMVLTDSNGEQPLSAMVSMVTKDNPGVVTCLDEARHGFETGDFVSFSEVQGMIQLNGCQPMEIKVLGPYTFSI-CD 79 (112)
T ss_dssp CCSCCCCCCCCCCSSCCEEEEEEECCSSSEEEEECTTCCCCCCTTCEEEECSEESCCTTGGGCCEEEEECSSSEEEE-SC
T ss_pred CCCCCcEEECCCCCccceeeeeeeecCCCcEEEEecCCccCCcCCCEEEEEeeEcchhhCCCcceEEEEcCCCEEEE-ec
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999 79
Q ss_pred cccccceeecceEEEeecCeeecccchhhhhc
Q 002073 389 TTNYGTYVKGGIVTQVKQPKVLNFKPLREALE 420 (972)
Q Consensus 389 t~~f~~y~~gG~~~qvk~pk~i~fksL~e~l~ 420 (972)
|+.|++|++||+++|||+|++++|+||+++|.
T Consensus 80 ts~f~~Y~~GG~~tqVK~p~~~~FksL~~~l~ 111 (112)
T 2v31_A 80 TSNFSDYIRGGIVSQVKVPKKISFKSLPASLV 111 (112)
T ss_dssp CTTSCCCCEECEEECCCCCCSCCCCCCSCCSC
T ss_pred ccccccccCCeEEEEEeCCeEEcccCHHHHhh
Confidence 99999999999999999999999999999886
No 25
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=99.94 E-value=6.9e-27 Score=263.64 Aligned_cols=151 Identities=18% Similarity=0.293 Sum_probs=139.3
Q ss_pred hhhHhhhhhhhh---ccC--HHH-HHHhhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCc
Q 002073 155 DIDEDLHSRQLA---VYG--RET-MRRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDND 228 (972)
Q Consensus 155 ~~d~~~YsRQi~---l~G--~e~-q~kL~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~D 228 (972)
+.+.+|||||+. +|| .++ |++|++++|+|+|+||+|+++|++|+++|||+|+|+|.|.|+.+||+|||+++++|
T Consensus 89 ~~~~~rY~Rq~~~~~~~g~~~~~~q~~L~~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~d 168 (353)
T 3h5n_A 89 STENNRYSRNFLHYQSYGANPVLVQDKLKNAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDD 168 (353)
T ss_dssp SCTTSTTHHHHHHHHHTTCCHHHHHHHHHTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGG
T ss_pred HHHHHHhhhhhhhhhccCCChHHHHHHHhCCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHH
Confidence 345689999976 476 466 99999999999999999999999999999999999999999999999999999999
Q ss_pred cCchHHHHHHHHHHHhcCCCEEEEeecCCChhh----hcCCceEEEcCCCHH-HHHHHHHHHHhcCCCceeEEeeeccee
Q 002073 229 IGKNRALASVQKLQELNNAVVLSTLTSKLTKEQ----LSDFQAVVFTDISLD-KAIEFDDFCHNHQPAISFIKAEVRGLF 303 (972)
Q Consensus 229 IGk~RAea~~~~L~eLNp~V~V~~~~~~l~~e~----l~~fdvVV~~~~~~~-~~~~ln~~c~~~~~~IpfI~a~~~G~~ 303 (972)
||++||++++++|+++||+|+|+++...++++. +++||+||+|.++.. .+..+|++|++++ +|||.+++.|..
T Consensus 169 iG~~Ka~~~~~~l~~~np~v~v~~~~~~i~~~~~~~~~~~~DlVvd~~Dn~~~~r~~ln~~c~~~~--~p~i~~~~~g~~ 246 (353)
T 3h5n_A 169 VGKNKTEVIKRELLKRNSEISVSEIALNINDYTDLHKVPEADIWVVSADHPFNLINWVNKYCVRAN--QPYINAGYVNDI 246 (353)
T ss_dssp TTSBHHHHHHHHHHHHCTTSEEEEEECCCCSGGGGGGSCCCSEEEECCCCSTTHHHHHHHHHHHTT--CCEEEEEEETTE
T ss_pred CCChHHHHHHHHHHHHCCCCeEEEeecccCchhhhhHhccCCEEEEecCChHHHHHHHHHHHHHhC--CCEEEEEEeCCE
Confidence 999999999999999999999999998876544 789999999999988 9999999999999 999999998888
Q ss_pred EEEE
Q 002073 304 GSVF 307 (972)
Q Consensus 304 G~vf 307 (972)
|++-
T Consensus 247 g~~g 250 (353)
T 3h5n_A 247 AVFG 250 (353)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8763
No 26
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=99.92 E-value=1.1e-24 Score=242.58 Aligned_cols=155 Identities=16% Similarity=0.218 Sum_probs=140.5
Q ss_pred hhhHhhhhhhhhccCHHHHHHhhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHH
Q 002073 155 DIDEDLHSRQLAVYGRETMRRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRA 234 (972)
Q Consensus 155 ~~d~~~YsRQi~l~G~e~q~kL~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RA 234 (972)
..|-++--...|+|+..++++|++++|+|+|+||+|+++|++|+++|||+|+|+|.|.|+.+||+|||+++.+|+|++||
T Consensus 11 ~~~lnl~lm~wRll~~~g~~kL~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka 90 (340)
T 3rui_A 11 SVDLNLKLMKWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKA 90 (340)
T ss_dssp HHHHHHHHHHHHTCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHH
T ss_pred HHHHHHHHHHHhhcchhhHHHHhCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHH
Confidence 34445555566889998999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCEEEEeecCC---------------C----hhhhcCCceEEEcCCCHHHHHHHHHHHHhcCCCceeE
Q 002073 235 LASVQKLQELNNAVVLSTLTSKL---------------T----KEQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFI 295 (972)
Q Consensus 235 ea~~~~L~eLNp~V~V~~~~~~l---------------~----~e~l~~fdvVV~~~~~~~~~~~ln~~c~~~~~~IpfI 295 (972)
++++++|+++||+|+++.+...+ + .+++++||+||+|.++.+++..+|++|++++ +|+|
T Consensus 91 ~aaa~~L~~inP~v~v~~~~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tDn~~tR~lin~~c~~~~--~plI 168 (340)
T 3rui_A 91 ELAAASLKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRESRWLPSLLSNIEN--KTVI 168 (340)
T ss_dssp HHHHHHHHHHCTTCEEEEECCCCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSTGGGHHHHHHHHHTT--CEEE
T ss_pred HHHHHHHHHhCCCCEEEEEeccccccCcccchhhhhcCCHHHHHhhhccCCEEEecCCCHHHHHHHHHHHHHcC--CcEE
Confidence 99999999999999999987543 1 3578899999999999999999999999999 9999
Q ss_pred EeeecceeEEEEEEcCC
Q 002073 296 KAEVRGLFGSVFCDFGP 312 (972)
Q Consensus 296 ~a~~~G~~G~vf~dfg~ 312 (972)
.+. .|+.|++.+..|.
T Consensus 169 ~aa-~G~~G~l~v~~g~ 184 (340)
T 3rui_A 169 NAA-LGFDSYLVMRHGN 184 (340)
T ss_dssp EEE-ECSSEEEEEECCC
T ss_pred Eee-ecceEEEEEeecc
Confidence 975 9999999886653
No 27
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=99.91 E-value=1.5e-24 Score=255.72 Aligned_cols=154 Identities=16% Similarity=0.204 Sum_probs=140.2
Q ss_pred hhhHhhhhhhhhc-------cCHHHHHHhhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcC
Q 002073 155 DIDEDLHSRQLAV-------YGRETMRRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDN 227 (972)
Q Consensus 155 ~~d~~~YsRQi~l-------~G~e~q~kL~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~ 227 (972)
...-.+|+||+++ |+..+|++|++++|+|+|+||+|+++|++|+++|||+|+|+|.|.|+.+||+||++++++
T Consensus 297 ~~~la~~~~~lnL~lmrwrll~~~gq~kL~~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~ 376 (598)
T 3vh1_A 297 PLKIADQSVDLNLKLMKWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFE 376 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCST
T ss_pred HHHHHHHHHhhhhhhhhhhccchhhHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchh
Confidence 4455789999987 667789999999999999999999999999999999999999999999999999999999
Q ss_pred ccCchHHHHHHHHHHHhcCCCEEEEeecCC---------------C----hhhhcCCceEEEcCCCHHHHHHHHHHHHhc
Q 002073 228 DIGKNRALASVQKLQELNNAVVLSTLTSKL---------------T----KEQLSDFQAVVFTDISLDKAIEFDDFCHNH 288 (972)
Q Consensus 228 DIGk~RAea~~~~L~eLNp~V~V~~~~~~l---------------~----~e~l~~fdvVV~~~~~~~~~~~ln~~c~~~ 288 (972)
|||++||++++++|+++||.|+|+++...+ + +++++++|+||+|.++.+.+..+|++|+++
T Consensus 377 DvG~~KAeaaa~~L~~iNP~v~v~~~~~~I~~pgh~i~~~~~~~l~~~~l~~li~~~DvVvdatDn~~tR~lin~~c~~~ 456 (598)
T 3vh1_A 377 DCGKPKAELAAASLKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRESRWLPSLLSNIE 456 (598)
T ss_dssp TCSSBHHHHHHHHHHHHCTTCEEEEECCCCCCSSCCCCSHHHHHHHHHHHHHHHHHCSEEEECCSBGGGTHHHHHHHHHT
T ss_pred hcCcHHHHHHHHHHHhHCCCcEEEEEeccccccCcccccccccccCHHHHHHHHhcCCEEEECCCCHHHHHHHHHHHHhc
Confidence 999999999999999999999999988654 1 246789999999999999999999999999
Q ss_pred CCCceeEEeeecceeEEEEEEcC
Q 002073 289 QPAISFIKAEVRGLFGSVFCDFG 311 (972)
Q Consensus 289 ~~~IpfI~a~~~G~~G~vf~dfg 311 (972)
+ +|+|.+ +.|+.|++++-.|
T Consensus 457 ~--~plI~a-a~G~~Gqv~v~~g 476 (598)
T 3vh1_A 457 N--KTVINA-ALGFDSYLVMRHG 476 (598)
T ss_dssp T--CEEEEE-EECSSEEEEEEEC
T ss_pred C--CCEEEE-EECCccEEEEEcc
Confidence 9 999986 7899999876433
No 28
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=99.90 E-value=5.6e-24 Score=250.84 Aligned_cols=144 Identities=16% Similarity=0.213 Sum_probs=134.6
Q ss_pred hccCHHHHHHhhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhc
Q 002073 166 AVYGRETMRRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELN 245 (972)
Q Consensus 166 ~l~G~e~q~kL~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLN 245 (972)
|+|+..++++|++++|+|||+||+|+++|++|+++|||+|+|+|.|.|+.+||+|||+++++|||++||++++++|+++|
T Consensus 314 Rllp~~g~ekL~~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iN 393 (615)
T 4gsl_A 314 RILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIF 393 (615)
T ss_dssp HTCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHC
T ss_pred hhcchhhHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhC
Confidence 77899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEeecCC---------------C----hhhhcCCceEEEcCCCHHHHHHHHHHHHhcCCCceeEEeeecceeEEE
Q 002073 246 NAVVLSTLTSKL---------------T----KEQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIKAEVRGLFGSV 306 (972)
Q Consensus 246 p~V~V~~~~~~l---------------~----~e~l~~fdvVV~~~~~~~~~~~ln~~c~~~~~~IpfI~a~~~G~~G~v 306 (972)
|.|+|+++...+ + +++++++|+||+|.|+.+.+..+|++|++++ +|+|.+. .|+.|++
T Consensus 394 P~V~v~~~~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tDn~~tR~~ln~~c~~~~--~PlI~aa-lG~~Gql 470 (615)
T 4gsl_A 394 PLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRESRWLPSLLSNIEN--KTVINAA-LGFDSYL 470 (615)
T ss_dssp TTCEEEEECCCCCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSGGGTHHHHHHHHHTT--CEEEEEE-ECSSEEE
T ss_pred CCcEEEEeeccccccCccccchhhhcCCHHHHHHHhhcCCEEEecCCCHHHHHHHHHHHHHcC--CeEEEEE-ccceeEE
Confidence 999999987543 1 2467899999999999999999999999999 9999975 9999999
Q ss_pred EEEcCC
Q 002073 307 FCDFGP 312 (972)
Q Consensus 307 f~dfg~ 312 (972)
.+..|.
T Consensus 471 ~v~~g~ 476 (615)
T 4gsl_A 471 VMRHGN 476 (615)
T ss_dssp EEECCC
T ss_pred EEeecc
Confidence 877664
No 29
>1z7l_A Ubiquitin-activating enzyme E1 1; SCCH, second catalytic cysteine half-domain, ligase; HET: TBR; 2.80A {Mus musculus}
Probab=99.00 E-value=5.6e-10 Score=121.14 Aligned_cols=67 Identities=30% Similarity=0.418 Sum_probs=48.2
Q ss_pred HhHhHHhhhccCCccccccCCCccccccCCCCCCcccCCCCcc--hHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHhh
Q 002073 826 FSNRVKQLIFTFPEDAATSTGAPFWSAPKRFPHPLQFSSADPS--HLHFVMAASILRAETFGIPIPDWTNNPKMLAEAVD 903 (972)
Q Consensus 826 f~~~i~~Ll~~fp~d~~~~~g~~fws~~kr~p~pl~fd~~~~~--h~~fv~aaanL~a~~fgi~~~~~~~~~~~~~~~~~ 903 (972)
+.+.+.+|+..+|..... ......|++||+||++ ||+||+|||||||++|||+.. ++-.++.+..
T Consensus 207 ~~~~~~~L~~~l~~~~~~---------~~~~~~pl~FeKDDd~N~hmdFItAaSNLRA~nY~I~~~----dr~~~K~IAG 273 (276)
T 1z7l_A 207 DDSRLEELKATLPSPDKL---------PGFKMYPIDFEKDDDSNFHMDFIVAASNLRAENYDISPA----DRHKSKLIAG 273 (276)
T ss_dssp CSHHHHHHHHHSCCGGGS---------TTCCCCCCCCCSSCTTSSHHHHHHHHHHHHHHHTTCCCC----CHHHHHHHTT
T ss_pred cHHHHHHHHHHhhhhhhc---------ccccCCCcceecCCCcccHHHHHHHHHHHHHHHcCCCcC----CHHHHHHHhC
Confidence 344566666666543211 1123468999999999 999999999999999999974 5667777666
Q ss_pred cc
Q 002073 904 KV 905 (972)
Q Consensus 904 ~~ 905 (972)
++
T Consensus 274 ~I 275 (276)
T 1z7l_A 274 KI 275 (276)
T ss_dssp C-
T ss_pred Cc
Confidence 54
No 30
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=97.25 E-value=0.00066 Score=71.52 Aligned_cols=98 Identities=13% Similarity=0.107 Sum_probs=72.3
Q ss_pred HhhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEee
Q 002073 175 RLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLT 254 (972)
Q Consensus 175 kL~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~ 254 (972)
.|++.+|||||.|.+|...++.|..+|. .||+++++... . .+.|.+ .-.++...
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~GA-~VtVvap~~~~------------------~----l~~l~~---~~~i~~i~ 81 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQEGA-AITVVAPTVSA------------------E----INEWEA---KGQLRVKR 81 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGGCC-CEEEECSSCCH------------------H----HHHHHH---TTSCEEEC
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEECCCCCH------------------H----HHHHHH---cCCcEEEE
Confidence 4778999999999999999999999997 79999874210 0 122222 22455667
Q ss_pred cCCChhhhcCCceEEEcCCCHHHHHHHHHHHHhcCCCceeEEeeecc
Q 002073 255 SKLTKEQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIKAEVRG 301 (972)
Q Consensus 255 ~~l~~e~l~~fdvVV~~~~~~~~~~~ln~~c~~~~~~IpfI~a~~~G 301 (972)
....++.+.++|+||.++++.+....+.+.|+ .+ ||+-.++.-.
T Consensus 82 ~~~~~~dL~~adLVIaAT~d~~~N~~I~~~ak-~g--i~VNvvD~p~ 125 (223)
T 3dfz_A 82 KKVGEEDLLNVFFIVVATNDQAVNKFVKQHIK-ND--QLVNMASSFS 125 (223)
T ss_dssp SCCCGGGSSSCSEEEECCCCTHHHHHHHHHSC-TT--CEEEC-----
T ss_pred CCCCHhHhCCCCEEEECCCCHHHHHHHHHHHh-CC--CEEEEeCCcc
Confidence 77788889999999999988888888899998 88 8766555433
No 31
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=96.95 E-value=0.0014 Score=71.38 Aligned_cols=79 Identities=16% Similarity=0.244 Sum_probs=62.9
Q ss_pred HhhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEee
Q 002073 175 RLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLT 254 (972)
Q Consensus 175 kL~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~ 254 (972)
.+++++|+|+|+||+|..++..|...|+++|+|++.+ ..|++.+++.+....|.+.+.+..
T Consensus 124 ~l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~-------------------~~~a~~la~~~~~~~~~~~i~~~~ 184 (283)
T 3jyo_A 124 NAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLD-------------------TSRAQALADVINNAVGREAVVGVD 184 (283)
T ss_dssp TCCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS-------------------HHHHHHHHHHHHHHHTSCCEEEEC
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECC-------------------HHHHHHHHHHHHhhcCCceEEEcC
Confidence 4678999999999999999999999999999999753 248888999999888877777654
Q ss_pred cCCChhhhcCCceEEEcC
Q 002073 255 SKLTKEQLSDFQAVVFTD 272 (972)
Q Consensus 255 ~~l~~e~l~~fdvVV~~~ 272 (972)
-+--++.+.++|+||.|+
T Consensus 185 ~~~l~~~l~~~DiVInaT 202 (283)
T 3jyo_A 185 ARGIEDVIAAADGVVNAT 202 (283)
T ss_dssp STTHHHHHHHSSEEEECS
T ss_pred HHHHHHHHhcCCEEEECC
Confidence 211124566788888775
No 32
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=96.81 E-value=0.0011 Score=72.25 Aligned_cols=79 Identities=20% Similarity=0.279 Sum_probs=61.9
Q ss_pred HHhcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCcE
Q 002073 572 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLN 651 (972)
Q Consensus 572 kL~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~~ 651 (972)
.+.+++++|+|+||+|..++..|+..|+ ++|+|++.+ ..|++.+++.+...+|.++
T Consensus 124 ~l~~k~vlVlGaGG~g~aia~~L~~~G~-----~~v~i~~R~-------------------~~~a~~la~~~~~~~~~~~ 179 (283)
T 3jyo_A 124 NAKLDSVVQVGAGGVGNAVAYALVTHGV-----QKLQVADLD-------------------TSRAQALADVINNAVGREA 179 (283)
T ss_dssp TCCCSEEEEECCSHHHHHHHHHHHHTTC-----SEEEEECSS-------------------HHHHHHHHHHHHHHHTSCC
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCC-----CEEEEEECC-------------------HHHHHHHHHHHHhhcCCce
Confidence 3678899999999999999999999999 899998654 2588888888888888777
Q ss_pred EEEeecccCCCcccccchhccCCCcEEEEcc
Q 002073 652 IEALQNRVGPETENVFDDTFWENITCVINAL 682 (972)
Q Consensus 652 I~~~~~~v~~~~e~i~~~~f~~~~DvVi~al 682 (972)
+..+.. +++ .+...++|+||||+
T Consensus 180 i~~~~~------~~l--~~~l~~~DiVInaT 202 (283)
T 3jyo_A 180 VVGVDA------RGI--EDVIAAADGVVNAT 202 (283)
T ss_dssp EEEECS------TTH--HHHHHHSSEEEECS
T ss_pred EEEcCH------HHH--HHHHhcCCEEEECC
Confidence 765531 111 13346789999996
No 33
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=96.77 E-value=0.0041 Score=67.44 Aligned_cols=118 Identities=15% Similarity=0.187 Sum_probs=76.0
Q ss_pred HhhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCcc--ccccCcCccCchHHHHHHHHHHH-hc-----C
Q 002073 175 RLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSS--NFVFSDNDIGKNRALASVQKLQE-LN-----N 246 (972)
Q Consensus 175 kL~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~--qffl~~~DIGk~RAea~~~~L~e-LN-----p 246 (972)
.|++.+|||||.|.+|...++.|..+|. +||++|++.... +.. +-+....| . ++. ....+. +| .
T Consensus 10 ~l~~k~VLVVGgG~va~rka~~Ll~~Ga-~VtViap~~~~~--l~~~~~~l~~~~~--~-~~~--~~~~~~~~~~~~~~~ 81 (274)
T 1kyq_A 10 QLKDKRILLIGGGEVGLTRLYKLMPTGC-KLTLVSPDLHKS--IIPKFGKFIQNKD--Q-PDY--REDAKRFINPNWDPT 81 (274)
T ss_dssp CCTTCEEEEEEESHHHHHHHHHHGGGTC-EEEEEEEEECTT--HHHHHCGGGC----------------CEEECTTCCTT
T ss_pred EcCCCEEEEECCcHHHHHHHHHHHhCCC-EEEEEcCCCCcc--hhHHHHHHHhccc--c-ccc--cchhhcccccccccc
Confidence 3678899999999999999999999996 799999755311 100 00000000 0 000 000000 00 1
Q ss_pred CCEE-EEeecCCChhhhc------CCceEEEcCCCHHHHHHHHHHHHhc---CCCceeEEeeecce
Q 002073 247 AVVL-STLTSKLTKEQLS------DFQAVVFTDISLDKAIEFDDFCHNH---QPAISFIKAEVRGL 302 (972)
Q Consensus 247 ~V~V-~~~~~~l~~e~l~------~fdvVV~~~~~~~~~~~ln~~c~~~---~~~IpfI~a~~~G~ 302 (972)
.-.| +.+...+.++.+. ++|+||.+.+..+....+.+.|++. + +++-.++.--+
T Consensus 82 ~g~i~~~i~~~~~~~dL~~l~~~~~adlViaat~d~~~n~~I~~~Ar~~f~~~--i~VNvvd~pel 145 (274)
T 1kyq_A 82 KNEIYEYIRSDFKDEYLDLENENDAWYIIMTCIPDHPESARIYHLCKERFGKQ--QLVNVADKPDL 145 (274)
T ss_dssp SCCCSEEECSSCCGGGGCCSSTTCCEEEEEECCSCHHHHHHHHHHHHHHHCTT--SEEEETTCGGG
T ss_pred cCCeeEEEcCCCCHHHHhhcccCCCeEEEEEcCCChHHHHHHHHHHHHhcCCC--cEEEECCCccc
Confidence 1234 6666677777777 8999999999888888999999998 8 77755554443
No 34
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=96.67 E-value=0.0094 Score=69.18 Aligned_cols=100 Identities=13% Similarity=0.115 Sum_probs=76.1
Q ss_pred HhhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEee
Q 002073 175 RLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLT 254 (972)
Q Consensus 175 kL~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~ 254 (972)
.|++.+|+|+|.|.+|...++.|..+|. .|+++|++... .++++-..-.++.+.
T Consensus 9 ~l~~~~vlVvGgG~va~~k~~~L~~~ga-~V~vi~~~~~~-------------------------~~~~l~~~~~i~~~~ 62 (457)
T 1pjq_A 9 QLRDRDCLIVGGGDVAERKARLLLEAGA-RLTVNALTFIP-------------------------QFTVWANEGMLTLVE 62 (457)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTB-EEEEEESSCCH-------------------------HHHHHHTTTSCEEEE
T ss_pred ECCCCEEEEECCCHHHHHHHHHHHhCcC-EEEEEcCCCCH-------------------------HHHHHHhcCCEEEEE
Confidence 3678899999999999999999999996 89999974211 122222222456666
Q ss_pred cCCChhhhcCCceEEEcCCCHHHHHHHHHHHHhcCCCceeEEeeecce
Q 002073 255 SKLTKEQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIKAEVRGL 302 (972)
Q Consensus 255 ~~l~~e~l~~fdvVV~~~~~~~~~~~ln~~c~~~~~~IpfI~a~~~G~ 302 (972)
....++.+.++|+||.+.+..+....+.+.|++.+ ||+-.++--.+
T Consensus 63 ~~~~~~~l~~~~lVi~at~~~~~n~~i~~~a~~~~--i~vn~~d~~e~ 108 (457)
T 1pjq_A 63 GPFDETLLDSCWLAIAATDDDTVNQRVSDAAESRR--IFCNVVDAPKA 108 (457)
T ss_dssp SSCCGGGGTTCSEEEECCSCHHHHHHHHHHHHHTT--CEEEETTCTTS
T ss_pred CCCCccccCCccEEEEcCCCHHHHHHHHHHHHHcC--CEEEECCCccc
Confidence 77778888999999999988877888999999999 88644444443
No 35
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.58 E-value=0.0028 Score=66.69 Aligned_cols=92 Identities=15% Similarity=0.220 Sum_probs=66.9
Q ss_pred HHhcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCcE
Q 002073 572 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLN 651 (972)
Q Consensus 572 kL~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~~ 651 (972)
.|++++|+|||+|.+|...++.|...|. +++|+|.+.-+ .+.+.+. ...+
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~GA------~VtVvap~~~~---------------------~l~~l~~--~~~i- 77 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQEGA------AITVVAPTVSA---------------------EINEWEA--KGQL- 77 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGGCC------CEEEECSSCCH---------------------HHHHHHH--TTSC-
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCC------EEEEECCCCCH---------------------HHHHHHH--cCCc-
Confidence 4778999999999999999999999997 89999864210 1111111 1223
Q ss_pred EEEeecccCCCcccccchhccCCCcEEEEccCChHHHHHHhhhhhccccceE
Q 002073 652 IEALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLL 703 (972)
Q Consensus 652 I~~~~~~v~~~~e~i~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~~~kPli 703 (972)
+.+... |.++.+.++|+||.|+|+.+.-..+...|. .++|+-
T Consensus 78 -~~i~~~--------~~~~dL~~adLVIaAT~d~~~N~~I~~~ak-~gi~VN 119 (223)
T 3dfz_A 78 -RVKRKK--------VGEEDLLNVFFIVVATNDQAVNKFVKQHIK-NDQLVN 119 (223)
T ss_dssp -EEECSC--------CCGGGSSSCSEEEECCCCTHHHHHHHHHSC-TTCEEE
T ss_pred -EEEECC--------CCHhHhCCCCEEEECCCCHHHHHHHHHHHh-CCCEEE
Confidence 333322 234456789999999999999999999998 888844
No 36
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.58 E-value=0.005 Score=56.32 Aligned_cols=96 Identities=15% Similarity=0.102 Sum_probs=62.8
Q ss_pred cCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCcEEEE
Q 002073 575 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEA 654 (972)
Q Consensus 575 ~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~~I~~ 654 (972)
..+|+|+|+|++|..+++.|...|. -+++++|.+. .|.+.+. .+.+.+
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~-----~~v~~~~r~~-------------------~~~~~~~------~~~~~~-- 52 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSN-----YSVTVADHDL-------------------AALAVLN------RMGVAT-- 52 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSS-----EEEEEEESCH-------------------HHHHHHH------TTTCEE--
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCC-----ceEEEEeCCH-------------------HHHHHHH------hCCCcE--
Confidence 4689999999999999999999995 4888887541 1222221 233333
Q ss_pred eecccCCCcccccchhccCCCcEEEEccCChHHHHHHhhhhhccccceEecc
Q 002073 655 LQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLESG 706 (972)
Q Consensus 655 ~~~~v~~~~e~i~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~~~kPli~sg 706 (972)
+...+... +.+ ...++++|+||+|+.. .....+...|...++++++..
T Consensus 53 ~~~d~~~~-~~~--~~~~~~~d~vi~~~~~-~~~~~~~~~~~~~g~~~~~~~ 100 (118)
T 3ic5_A 53 KQVDAKDE-AGL--AKALGGFDAVISAAPF-FLTPIIAKAAKAAGAHYFDLT 100 (118)
T ss_dssp EECCTTCH-HHH--HHHTTTCSEEEECSCG-GGHHHHHHHHHHTTCEEECCC
T ss_pred EEecCCCH-HHH--HHHHcCCCEEEECCCc-hhhHHHHHHHHHhCCCEEEec
Confidence 22233221 111 2456789999999953 344566777888888888643
No 37
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.46 E-value=0.02 Score=54.62 Aligned_cols=93 Identities=15% Similarity=0.159 Sum_probs=63.4
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEeec
Q 002073 176 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTS 255 (972)
Q Consensus 176 L~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~~ 255 (972)
+...+|+|+|+|.+|..+++.|...|. .++++|.+. .++ +.+.+. .+ .+...
T Consensus 4 ~~~~~v~I~G~G~iG~~la~~L~~~g~-~V~~id~~~-------------------~~~----~~~~~~--~~--~~~~g 55 (141)
T 3llv_A 4 NGRYEYIVIGSEAAGVGLVRELTAAGK-KVLAVDKSK-------------------EKI----ELLEDE--GF--DAVIA 55 (141)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESCH-------------------HHH----HHHHHT--TC--EEEEC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEECCH-------------------HHH----HHHHHC--CC--cEEEC
Confidence 445789999999999999999999998 788988632 122 223332 22 33334
Q ss_pred CCC-hhh-----hcCCceEEEcCCCHHHHHHHHHHHHhcCCCceeEEee
Q 002073 256 KLT-KEQ-----LSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIKAE 298 (972)
Q Consensus 256 ~l~-~e~-----l~~fdvVV~~~~~~~~~~~ln~~c~~~~~~IpfI~a~ 298 (972)
+.+ ++. +.++|+||.+..+.+....+-..+++.+ .+.|.+.
T Consensus 56 d~~~~~~l~~~~~~~~d~vi~~~~~~~~n~~~~~~a~~~~--~~~iia~ 102 (141)
T 3llv_A 56 DPTDESFYRSLDLEGVSAVLITGSDDEFNLKILKALRSVS--DVYAIVR 102 (141)
T ss_dssp CTTCHHHHHHSCCTTCSEEEECCSCHHHHHHHHHHHHHHC--CCCEEEE
T ss_pred CCCCHHHHHhCCcccCCEEEEecCCHHHHHHHHHHHHHhC--CceEEEE
Confidence 432 332 4578999999888888888888888887 5555443
No 38
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.24 E-value=0.017 Score=52.74 Aligned_cols=89 Identities=20% Similarity=0.152 Sum_probs=60.8
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEeecCC
Q 002073 178 ASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKL 257 (972)
Q Consensus 178 ~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~~~l 257 (972)
..+|+|+|+|++|..+++.|...|..+++++|.+. .+++. +. .+.+.+ ...++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~-------------------~~~~~----~~--~~~~~~--~~~d~ 57 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL-------------------AALAV----LN--RMGVAT--KQVDA 57 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH-------------------HHHHH----HH--TTTCEE--EECCT
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH-------------------HHHHH----HH--hCCCcE--EEecC
Confidence 35899999999999999999999977899988531 12221 22 233333 23333
Q ss_pred Ch-----hhhcCCceEEEcCCCHHHHHHHHHHHHhcCCCceeEE
Q 002073 258 TK-----EQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIK 296 (972)
Q Consensus 258 ~~-----e~l~~fdvVV~~~~~~~~~~~ln~~c~~~~~~IpfI~ 296 (972)
++ +.+.++|+||.|.. ......+.+.|.+.+ ++++.
T Consensus 58 ~~~~~~~~~~~~~d~vi~~~~-~~~~~~~~~~~~~~g--~~~~~ 98 (118)
T 3ic5_A 58 KDEAGLAKALGGFDAVISAAP-FFLTPIIAKAAKAAG--AHYFD 98 (118)
T ss_dssp TCHHHHHHHTTTCSEEEECSC-GGGHHHHHHHHHHTT--CEEEC
T ss_pred CCHHHHHHHHcCCCEEEECCC-chhhHHHHHHHHHhC--CCEEE
Confidence 21 35678999999874 444567788889988 76663
No 39
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.14 E-value=0.035 Score=54.11 Aligned_cols=104 Identities=17% Similarity=0.106 Sum_probs=63.4
Q ss_pred HHHhhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccC--cCccCchHHHHHHHHHHHhcCCCEE
Q 002073 173 MRRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFS--DNDIGKNRALASVQKLQELNNAVVL 250 (972)
Q Consensus 173 q~kL~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~--~~DIGk~RAea~~~~L~eLNp~V~V 250 (972)
-+++.+.+|+|+|+|.+|..+++.|...|. .++++|.+.-....+...+... ..|... . +.|.
T Consensus 14 ~~~~~~~~v~IiG~G~iG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~g~~~~~~d~~~--~----~~l~-------- 78 (155)
T 2g1u_A 14 SKKQKSKYIVIFGCGRLGSLIANLASSSGH-SVVVVDKNEYAFHRLNSEFSGFTVVGDAAE--F----ETLK-------- 78 (155)
T ss_dssp ---CCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGGGGSCTTCCSEEEESCTTS--H----HHHH--------
T ss_pred hcccCCCcEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHhcCCCcEEEecCCC--H----HHHH--------
Confidence 356777899999999999999999999997 8999997653332222110000 001000 0 0111
Q ss_pred EEeecCCChhhhcCCceEEEcCCCHHHHHHHHHHHHhcCCCceeEEeeec
Q 002073 251 STLTSKLTKEQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIKAEVR 300 (972)
Q Consensus 251 ~~~~~~l~~e~l~~fdvVV~~~~~~~~~~~ln~~c~~~~~~IpfI~a~~~ 300 (972)
...+.++|+||.|..+......+...++..++ ...|.+.+.
T Consensus 79 --------~~~~~~ad~Vi~~~~~~~~~~~~~~~~~~~~~-~~~iv~~~~ 119 (155)
T 2g1u_A 79 --------ECGMEKADMVFAFTNDDSTNFFISMNARYMFN-VENVIARVY 119 (155)
T ss_dssp --------TTTGGGCSEEEECSSCHHHHHHHHHHHHHTSC-CSEEEEECS
T ss_pred --------HcCcccCCEEEEEeCCcHHHHHHHHHHHHHCC-CCeEEEEEC
Confidence 11256789999999887777777788887332 444444443
No 40
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=96.12 E-value=0.014 Score=55.12 Aligned_cols=89 Identities=16% Similarity=0.180 Sum_probs=55.5
Q ss_pred HHHhhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEE
Q 002073 173 MRRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLST 252 (972)
Q Consensus 173 q~kL~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~ 252 (972)
|+++...+|+|+|+|++|..+++.|...|. .++++|.+.-....+ ++. ... .
T Consensus 1 m~~~~~~~v~I~G~G~iG~~~a~~l~~~g~-~v~~~d~~~~~~~~~-----------------------~~~--~~~--~ 52 (144)
T 2hmt_A 1 MGRIKNKQFAVIGLGRFGGSIVKELHRMGH-EVLAVDINEEKVNAY-----------------------ASY--ATH--A 52 (144)
T ss_dssp -----CCSEEEECCSHHHHHHHHHHHHTTC-CCEEEESCHHHHHTT-----------------------TTT--CSE--E
T ss_pred CCCCcCCcEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHH-----------------------HHh--CCE--E
Confidence 345667899999999999999999999997 688888643211111 111 111 1
Q ss_pred eecCC-Chh-----hhcCCceEEEcCCC-HHHHHHHHHHHHhcC
Q 002073 253 LTSKL-TKE-----QLSDFQAVVFTDIS-LDKAIEFDDFCHNHQ 289 (972)
Q Consensus 253 ~~~~l-~~e-----~l~~fdvVV~~~~~-~~~~~~ln~~c~~~~ 289 (972)
...+. +.+ .+.++|+||.+..+ .+....+...+++.+
T Consensus 53 ~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~~~~ 96 (144)
T 2hmt_A 53 VIANATEENELLSLGIRNFEYVIVAIGANIQASTLTTLLLKELD 96 (144)
T ss_dssp EECCTTCHHHHHTTTGGGCSEEEECCCSCHHHHHHHHHHHHHTT
T ss_pred EEeCCCCHHHHHhcCCCCCCEEEECCCCchHHHHHHHHHHHHcC
Confidence 11111 111 25678999998875 466667778888888
No 41
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=95.81 E-value=0.016 Score=62.62 Aligned_cols=73 Identities=19% Similarity=0.289 Sum_probs=57.5
Q ss_pred HhcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCcEE
Q 002073 573 LEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNI 652 (972)
Q Consensus 573 L~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~~I 652 (972)
+..++++|+|+||.+..++-.|+..|+ .+|+|++.+ ..|++.+++.+....|...+
T Consensus 123 ~~~~~~lilGaGGaarai~~aL~~~g~-----~~i~i~nRt-------------------~~ra~~la~~~~~~~~~~~~ 178 (269)
T 3tum_A 123 PAGKRALVIGCGGVGSAIAYALAEAGI-----ASITLCDPS-------------------TARMGAVCELLGNGFPGLTV 178 (269)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC-----SEEEEECSC-------------------HHHHHHHHHHHHHHCTTCEE
T ss_pred cccCeEEEEecHHHHHHHHHHHHHhCC-----CeEEEeCCC-------------------HHHHHHHHHHHhccCCccee
Confidence 457899999999999999999999999 899998532 25788889998888876654
Q ss_pred EEeecccCCCcccccchhccCCCcEEEEcc
Q 002073 653 EALQNRVGPETENVFDDTFWENITCVINAL 682 (972)
Q Consensus 653 ~~~~~~v~~~~e~i~~~~f~~~~DvVi~al 682 (972)
.... .-++++|+||||+
T Consensus 179 ~~~~-------------~~~~~~dliiNaT 195 (269)
T 3tum_A 179 STQF-------------SGLEDFDLVANAS 195 (269)
T ss_dssp ESCC-------------SCSTTCSEEEECS
T ss_pred hhhh-------------hhhhcccccccCC
Confidence 3211 1235789999996
No 42
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.78 E-value=0.03 Score=53.37 Aligned_cols=95 Identities=14% Similarity=0.158 Sum_probs=61.3
Q ss_pred hcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCcEEE
Q 002073 574 EDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIE 653 (972)
Q Consensus 574 ~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~~I~ 653 (972)
...+|+|+|+|.+|..+++.|...|. +++++|.|. .+.+.+ .+. ...
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~------~V~~id~~~-------------------~~~~~~----~~~--~~~-- 51 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGK------KVLAVDKSK-------------------EKIELL----EDE--GFD-- 51 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTC------CEEEEESCH-------------------HHHHHH----HHT--TCE--
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC------eEEEEECCH-------------------HHHHHH----HHC--CCc--
Confidence 35689999999999999999999998 899998652 122222 221 222
Q ss_pred EeecccCCCcccccchhccCCCcEEEEccCChHHHHHHhhhhhccccceE
Q 002073 654 ALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLL 703 (972)
Q Consensus 654 ~~~~~v~~~~e~i~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~~~kPli 703 (972)
.+...... ...+...-..++|+||.++++.+....+...+...+.+.+
T Consensus 52 ~~~gd~~~--~~~l~~~~~~~~d~vi~~~~~~~~n~~~~~~a~~~~~~~i 99 (141)
T 3llv_A 52 AVIADPTD--ESFYRSLDLEGVSAVLITGSDDEFNLKILKALRSVSDVYA 99 (141)
T ss_dssp EEECCTTC--HHHHHHSCCTTCSEEEECCSCHHHHHHHHHHHHHHCCCCE
T ss_pred EEECCCCC--HHHHHhCCcccCCEEEEecCCHHHHHHHHHHHHHhCCceE
Confidence 23322221 1222222346899999999998887777777766554433
No 43
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=95.68 E-value=0.025 Score=62.38 Aligned_cols=80 Identities=15% Similarity=0.223 Sum_probs=56.1
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEeec
Q 002073 176 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTS 255 (972)
Q Consensus 176 L~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~~ 255 (972)
+.+++|+|+|+||.|..++..|...|+++|+|++.+.- ...||+.+++.+.+..+ ..+.+..-
T Consensus 146 l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~----------------~~~~a~~la~~~~~~~~-~~v~~~~~ 208 (312)
T 3t4e_A 146 MRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDD----------------FFEKAVAFAKRVNENTD-CVVTVTDL 208 (312)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSST----------------HHHHHHHHHHHHHHHSS-CEEEEEET
T ss_pred cCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCc----------------hHHHHHHHHHHhhhccC-cceEEech
Confidence 67889999999999999999999999999999875310 02478888877776543 33443321
Q ss_pred C-C--ChhhhcCCceEEEcC
Q 002073 256 K-L--TKEQLSDFQAVVFTD 272 (972)
Q Consensus 256 ~-l--~~e~l~~fdvVV~~~ 272 (972)
. + ..+.+.++|+||.|+
T Consensus 209 ~~l~~~~~~l~~~DiIINaT 228 (312)
T 3t4e_A 209 ADQHAFTEALASADILTNGT 228 (312)
T ss_dssp TCHHHHHHHHHHCSEEEECS
T ss_pred HhhhhhHhhccCceEEEECC
Confidence 1 1 023456778777665
No 44
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=95.64 E-value=0.018 Score=63.56 Aligned_cols=83 Identities=17% Similarity=0.143 Sum_probs=57.5
Q ss_pred HhcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCcEE
Q 002073 573 LEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNI 652 (972)
Q Consensus 573 L~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~~I 652 (972)
+.+++++|+|+||+|..++..|+..|+ .+|+|++.+.- -..|++.+++.+....+ ..+
T Consensus 152 l~gk~~lVlGaGG~g~aia~~L~~~Ga-----~~V~i~nR~~~----------------~~~~a~~la~~~~~~~~-~~~ 209 (315)
T 3tnl_A 152 IIGKKMTICGAGGAATAICIQAALDGV-----KEISIFNRKDD----------------FYANAEKTVEKINSKTD-CKA 209 (315)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTC-----SEEEEEECSST----------------THHHHHHHHHHHHHHSS-CEE
T ss_pred ccCCEEEEECCChHHHHHHHHHHHCCC-----CEEEEEECCCc----------------hHHHHHHHHHHhhhhcC-Cce
Confidence 568899999999999999999999999 89999864410 02477778887776553 444
Q ss_pred EEeecccCCCcccccchhccCCCcEEEEcc
Q 002073 653 EALQNRVGPETENVFDDTFWENITCVINAL 682 (972)
Q Consensus 653 ~~~~~~v~~~~e~i~~~~f~~~~DvVi~al 682 (972)
.... +.. .+.+ .+....+|+||||+
T Consensus 210 ~~~~--~~~-~~~l--~~~l~~aDiIINaT 234 (315)
T 3tnl_A 210 QLFD--IED-HEQL--RKEIAESVIFTNAT 234 (315)
T ss_dssp EEEE--TTC-HHHH--HHHHHTCSEEEECS
T ss_pred EEec--cch-HHHH--HhhhcCCCEEEECc
Confidence 4432 110 0111 12346899999996
No 45
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.63 E-value=0.03 Score=54.63 Aligned_cols=94 Identities=14% Similarity=0.185 Sum_probs=56.8
Q ss_pred HHHHhcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCC
Q 002073 570 QKKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPR 649 (972)
Q Consensus 570 q~kL~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~ 649 (972)
-+++.+.+|+|+|+|.+|..+++.|...|. +++++|.+.-....+.+. .+
T Consensus 14 ~~~~~~~~v~IiG~G~iG~~la~~L~~~g~------~V~vid~~~~~~~~~~~~------------------------~g 63 (155)
T 2g1u_A 14 SKKQKSKYIVIFGCGRLGSLIANLASSSGH------SVVVVDKNEYAFHRLNSE------------------------FS 63 (155)
T ss_dssp ---CCCCEEEEECCSHHHHHHHHHHHHTTC------EEEEEESCGGGGGGSCTT------------------------CC
T ss_pred hcccCCCcEEEECCCHHHHHHHHHHHhCCC------eEEEEECCHHHHHHHHhc------------------------CC
Confidence 355667899999999999999999999997 899998764221111100 01
Q ss_pred cEEEEeecccCCCcccccchhccCCCcEEEEccCChHHHHHHhhhhhc
Q 002073 650 LNIEALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLY 697 (972)
Q Consensus 650 ~~I~~~~~~v~~~~e~i~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~ 697 (972)
..+ +...... ...+...-..++|+||.|+.+......+...+..
T Consensus 64 ~~~--~~~d~~~--~~~l~~~~~~~ad~Vi~~~~~~~~~~~~~~~~~~ 107 (155)
T 2g1u_A 64 GFT--VVGDAAE--FETLKECGMEKADMVFAFTNDDSTNFFISMNARY 107 (155)
T ss_dssp SEE--EESCTTS--HHHHHTTTGGGCSEEEECSSCHHHHHHHHHHHHH
T ss_pred CcE--EEecCCC--HHHHHHcCcccCCEEEEEeCCcHHHHHHHHHHHH
Confidence 111 1111110 1111111245789999999998877766666554
No 46
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=95.59 E-value=0.032 Score=61.62 Aligned_cols=80 Identities=13% Similarity=0.215 Sum_probs=56.9
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEeec
Q 002073 176 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTS 255 (972)
Q Consensus 176 L~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~~ 255 (972)
+++++|+|+|+||+|..++..|...|+++|+|++.+.- -..||+.+++.+.+..+ +.+.+..-
T Consensus 152 l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~----------------~~~~a~~la~~~~~~~~-~~~~~~~~ 214 (315)
T 3tnl_A 152 IIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDD----------------FYANAEKTVEKINSKTD-CKAQLFDI 214 (315)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSST----------------THHHHHHHHHHHHHHSS-CEEEEEET
T ss_pred ccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCc----------------hHHHHHHHHHHhhhhcC-CceEEecc
Confidence 67889999999999999999999999999999975310 02478888888876554 44444321
Q ss_pred C-CC--hhhhcCCceEEEcC
Q 002073 256 K-LT--KEQLSDFQAVVFTD 272 (972)
Q Consensus 256 ~-l~--~e~l~~fdvVV~~~ 272 (972)
+ .+ ++.+.++|+||.|+
T Consensus 215 ~~~~~l~~~l~~aDiIINaT 234 (315)
T 3tnl_A 215 EDHEQLRKEIAESVIFTNAT 234 (315)
T ss_dssp TCHHHHHHHHHTCSEEEECS
T ss_pred chHHHHHhhhcCCCEEEECc
Confidence 1 11 13456778877765
No 47
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.55 E-value=0.068 Score=50.16 Aligned_cols=84 Identities=13% Similarity=0.124 Sum_probs=55.7
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEeecCC-
Q 002073 179 SNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKL- 257 (972)
Q Consensus 179 s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~~~l- 257 (972)
.+|+|+|+|.+|..+++.|...|. .++++|.+.- ++ +.+.+.. .+. ....+.
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~-~v~~~d~~~~-------------------~~----~~~~~~~-~~~--~~~~d~~ 57 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKD-------------------IC----KKASAEI-DAL--VINGDCT 57 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHH-------------------HH----HHHHHHC-SSE--EEESCTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHH-------------------HH----HHHHHhc-CcE--EEEcCCC
Confidence 489999999999999999999995 7999985321 11 1222211 122 222222
Q ss_pred Ch-----hhhcCCceEEEcCCCHHHHHHHHHHHHhcC
Q 002073 258 TK-----EQLSDFQAVVFTDISLDKAIEFDDFCHNHQ 289 (972)
Q Consensus 258 ~~-----e~l~~fdvVV~~~~~~~~~~~ln~~c~~~~ 289 (972)
+. ..+.++|+||.|..+......+...++..+
T Consensus 58 ~~~~l~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~~~ 94 (140)
T 1lss_A 58 KIKTLEDAGIEDADMYIAVTGKEEVNLMSSLLAKSYG 94 (140)
T ss_dssp SHHHHHHTTTTTCSEEEECCSCHHHHHHHHHHHHHTT
T ss_pred CHHHHHHcCcccCCEEEEeeCCchHHHHHHHHHHHcC
Confidence 11 225689999999877766666777788776
No 48
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.43 E-value=0.09 Score=50.98 Aligned_cols=96 Identities=9% Similarity=-0.017 Sum_probs=64.5
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcC-CCEEEEee
Q 002073 176 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNN-AVVLSTLT 254 (972)
Q Consensus 176 L~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp-~V~V~~~~ 254 (972)
|.+.+|+|+|+|.+|..+++.|...|. .++++|.+.- .++ +.+.+..+ .+. +..
T Consensus 1 ~~~~~vlI~G~G~vG~~la~~L~~~g~-~V~vid~~~~------------------~~~----~~~~~~~~~~~~--~i~ 55 (153)
T 1id1_A 1 HRKDHFIVCGHSILAINTILQLNQRGQ-NVTVISNLPE------------------DDI----KQLEQRLGDNAD--VIP 55 (153)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCH------------------HHH----HHHHHHHCTTCE--EEE
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCC-CEEEEECCCh------------------HHH----HHHHHhhcCCCe--EEE
Confidence 356789999999999999999999996 7889886320 122 22222222 333 333
Q ss_pred cCCC-h-----hhhcCCceEEEcCCCHHHHHHHHHHHHhcCCCceeEEe
Q 002073 255 SKLT-K-----EQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIKA 297 (972)
Q Consensus 255 ~~l~-~-----e~l~~fdvVV~~~~~~~~~~~ln~~c~~~~~~IpfI~a 297 (972)
++.+ + ..+.++|+||.+..+.+....+...+++.++ ...|.+
T Consensus 56 gd~~~~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~-~~~ii~ 103 (153)
T 1id1_A 56 GDSNDSSVLKKAGIDRCRAILALSDNDADNAFVVLSAKDMSS-DVKTVL 103 (153)
T ss_dssp SCTTSHHHHHHHTTTTCSEEEECSSCHHHHHHHHHHHHHHTS-SSCEEE
T ss_pred cCCCCHHHHHHcChhhCCEEEEecCChHHHHHHHHHHHHHCC-CCEEEE
Confidence 4332 2 2367899999999888888888888988743 334443
No 49
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=95.39 E-value=0.037 Score=59.74 Aligned_cols=73 Identities=32% Similarity=0.322 Sum_probs=58.9
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEeec
Q 002073 176 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTS 255 (972)
Q Consensus 176 L~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~~ 255 (972)
++.++|+|+|+||.+..++-.|...|+++|+|++.+ ..||+.+++.+....+...+....
T Consensus 123 ~~~~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt-------------------~~ra~~la~~~~~~~~~~~~~~~~- 182 (269)
T 3tum_A 123 PAGKRALVIGCGGVGSAIAYALAEAGIASITLCDPS-------------------TARMGAVCELLGNGFPGLTVSTQF- 182 (269)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSC-------------------HHHHHHHHHHHHHHCTTCEEESCC-
T ss_pred cccCeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCC-------------------HHHHHHHHHHHhccCCcceehhhh-
Confidence 467899999999999999999999999999998642 248899999999888877654322
Q ss_pred CCChhhhcCCceEEEcC
Q 002073 256 KLTKEQLSDFQAVVFTD 272 (972)
Q Consensus 256 ~l~~e~l~~fdvVV~~~ 272 (972)
+.+.++|+||-|+
T Consensus 183 ----~~~~~~dliiNaT 195 (269)
T 3tum_A 183 ----SGLEDFDLVANAS 195 (269)
T ss_dssp ----SCSTTCSEEEECS
T ss_pred ----hhhhcccccccCC
Confidence 2345789998775
No 50
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=95.27 E-value=0.028 Score=53.04 Aligned_cols=36 Identities=19% Similarity=0.463 Sum_probs=30.0
Q ss_pred HHhcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 572 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 572 kL~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
++...+|+|+|+|.+|..+++.|...|. +++++|.+
T Consensus 3 ~~~~~~v~I~G~G~iG~~~a~~l~~~g~------~v~~~d~~ 38 (144)
T 2hmt_A 3 RIKNKQFAVIGLGRFGGSIVKELHRMGH------EVLAVDIN 38 (144)
T ss_dssp ---CCSEEEECCSHHHHHHHHHHHHTTC------CCEEEESC
T ss_pred CCcCCcEEEECCCHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 3556789999999999999999999997 78888865
No 51
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.16 E-value=0.12 Score=49.47 Aligned_cols=90 Identities=19% Similarity=0.263 Sum_probs=60.1
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEeecCC
Q 002073 178 ASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKL 257 (972)
Q Consensus 178 ~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~~~l 257 (972)
+.+|+|+|+|.+|..+|+.|...|. .++++|.+.- + .+.+++. .+. +..++.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~~-------------------~----~~~~~~~--g~~--~i~gd~ 58 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDI-PLVVIETSRT-------------------R----VDELRER--GVR--AVLGNA 58 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHH-------------------H----HHHHHHT--TCE--EEESCT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCHH-------------------H----HHHHHHc--CCC--EEECCC
Confidence 3589999999999999999999997 7999986431 2 2233332 233 333333
Q ss_pred -Chhh-----hcCCceEEEcCCCHHHHHHHHHHHHhcCCCceeE
Q 002073 258 -TKEQ-----LSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFI 295 (972)
Q Consensus 258 -~~e~-----l~~fdvVV~~~~~~~~~~~ln~~c~~~~~~IpfI 295 (972)
+++. +.++|+||.+..+......+-..+++.++.+..|
T Consensus 59 ~~~~~l~~a~i~~ad~vi~~~~~~~~n~~~~~~a~~~~~~~~ii 102 (140)
T 3fwz_A 59 ANEEIMQLAHLECAKWLILTIPNGYEAGEIVASARAKNPDIEII 102 (140)
T ss_dssp TSHHHHHHTTGGGCSEEEECCSCHHHHHHHHHHHHHHCSSSEEE
T ss_pred CCHHHHHhcCcccCCEEEEECCChHHHHHHHHHHHHHCCCCeEE
Confidence 2222 4678999998887766666666777775434433
No 52
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=95.09 E-value=0.036 Score=63.18 Aligned_cols=103 Identities=18% Similarity=0.223 Sum_probs=68.0
Q ss_pred CcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCcEEEEe
Q 002073 576 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEAL 655 (972)
Q Consensus 576 ~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~~I~~~ 655 (972)
+||+|+|||++|..+++.|+..|-. ..+++++|.+ ..|++.+++.+....+ .++...
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~---~~~V~v~~r~-------------------~~~~~~la~~l~~~~~-~~~~~~ 58 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREV---FSHITLASRT-------------------LSKCQEIAQSIKAKGY-GEIDIT 58 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTT---CCEEEEEESC-------------------HHHHHHHHHHHHHTTC-CCCEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCC---ceEEEEEECC-------------------HHHHHHHHHHhhhhcC-CceEEE
Confidence 4899999999999999999998720 0278887643 2466666666654331 133444
Q ss_pred ecccCCCcccccchhccCC--CcEEEEccCChHHHHHHhhhhhccccceEec
Q 002073 656 QNRVGPETENVFDDTFWEN--ITCVINALDNVNARLYVDQRCLYFQKPLLES 705 (972)
Q Consensus 656 ~~~v~~~~e~i~~~~f~~~--~DvVi~alDn~~aR~~v~~~c~~~~kPli~s 705 (972)
...+... +.+ .+.+++ .|+||+|+.... ..-+.+.|...++.+++.
T Consensus 59 ~~D~~d~-~~l--~~~l~~~~~DvVin~ag~~~-~~~v~~a~l~~g~~vvD~ 106 (405)
T 4ina_A 59 TVDADSI-EEL--VALINEVKPQIVLNIALPYQ-DLTIMEACLRTGVPYLDT 106 (405)
T ss_dssp ECCTTCH-HHH--HHHHHHHCCSEEEECSCGGG-HHHHHHHHHHHTCCEEES
T ss_pred EecCCCH-HHH--HHHHHhhCCCEEEECCCccc-ChHHHHHHHHhCCCEEEe
Confidence 4344321 111 233444 899999987543 456778899999999974
No 53
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=95.04 E-value=0.03 Score=60.70 Aligned_cols=110 Identities=20% Similarity=0.342 Sum_probs=66.7
Q ss_pred HHhcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCc--ccccccCcccccHHHHHH-HHHHh-hC
Q 002073 572 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSR--QFLFRDWNIGQAKSTVAA-SAATS-IN 647 (972)
Q Consensus 572 kL~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnR--QfLf~~~dVGk~Ks~vaa-~~l~~-in 647 (972)
.|++++|+|||+|.+|...++.|...|. +++|+|.+.-+. +.. +-+.. + +..++. ...++ ++
T Consensus 10 ~l~~k~VLVVGgG~va~rka~~Ll~~Ga------~VtViap~~~~~--l~~~~~~l~~--~----~~~~~~~~~~~~~~~ 75 (274)
T 1kyq_A 10 QLKDKRILLIGGGEVGLTRLYKLMPTGC------KLTLVSPDLHKS--IIPKFGKFIQ--N----KDQPDYREDAKRFIN 75 (274)
T ss_dssp CCTTCEEEEEEESHHHHHHHHHHGGGTC------EEEEEEEEECTT--HHHHHCGGGC-----------------CEEEC
T ss_pred EcCCCEEEEECCcHHHHHHHHHHHhCCC------EEEEEcCCCCcc--hhHHHHHHHh--c----cccccccchhhcccc
Confidence 3568999999999999999999999997 899999765211 100 00000 0 000000 00000 11
Q ss_pred CC-----cEE-EEeecccCCCcccccchhccC------CCcEEEEccCChHHHHHHhhhhhcc---ccceE
Q 002073 648 PR-----LNI-EALQNRVGPETENVFDDTFWE------NITCVINALDNVNARLYVDQRCLYF---QKPLL 703 (972)
Q Consensus 648 P~-----~~I-~~~~~~v~~~~e~i~~~~f~~------~~DvVi~alDn~~aR~~v~~~c~~~---~kPli 703 (972)
+. -+| +.+...+ .+..+. ++|+||.|+|+.+.-..+...|... ++|+-
T Consensus 76 ~~~~~~~g~i~~~i~~~~--------~~~dL~~l~~~~~adlViaat~d~~~n~~I~~~Ar~~f~~~i~VN 138 (274)
T 1kyq_A 76 PNWDPTKNEIYEYIRSDF--------KDEYLDLENENDAWYIIMTCIPDHPESARIYHLCKERFGKQQLVN 138 (274)
T ss_dssp TTCCTTSCCCSEEECSSC--------CGGGGCCSSTTCCEEEEEECCSCHHHHHHHHHHHHHHHCTTSEEE
T ss_pred cccccccCCeeEEEcCCC--------CHHHHhhcccCCCeEEEEEcCCChHHHHHHHHHHHHhcCCCcEEE
Confidence 11 122 3232222 233344 8999999999998888999999988 77773
No 54
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.03 E-value=0.041 Score=51.73 Aligned_cols=88 Identities=15% Similarity=0.147 Sum_probs=53.4
Q ss_pred CcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCcEEEEe
Q 002073 576 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEAL 655 (972)
Q Consensus 576 ~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~~I~~~ 655 (972)
.+|+|+|+|.+|..+++.|...|. +++++|.+. .+.+. +.+.. ++. .+
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~------~v~~~d~~~-------------------~~~~~----~~~~~-~~~--~~ 52 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGH------DIVLIDIDK-------------------DICKK----ASAEI-DAL--VI 52 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC------EEEEEESCH-------------------HHHHH----HHHHC-SSE--EE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC------eEEEEECCH-------------------HHHHH----HHHhc-CcE--EE
Confidence 589999999999999999999987 789987532 11111 11111 222 22
Q ss_pred ecccCCCcccccchhccCCCcEEEEccCChHHHHHHhhhhhc
Q 002073 656 QNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLY 697 (972)
Q Consensus 656 ~~~v~~~~e~i~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~ 697 (972)
..... ....+......++|+||.|+.+......+...+..
T Consensus 53 ~~d~~--~~~~l~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~ 92 (140)
T 1lss_A 53 NGDCT--KIKTLEDAGIEDADMYIAVTGKEEVNLMSSLLAKS 92 (140)
T ss_dssp ESCTT--SHHHHHHTTTTTCSEEEECCSCHHHHHHHHHHHHH
T ss_pred EcCCC--CHHHHHHcCcccCCEEEEeeCCchHHHHHHHHHHH
Confidence 22221 11111122356899999999887665555555544
No 55
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=95.03 E-value=0.033 Score=61.46 Aligned_cols=83 Identities=10% Similarity=0.133 Sum_probs=56.3
Q ss_pred HhcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCcEE
Q 002073 573 LEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNI 652 (972)
Q Consensus 573 L~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~~I 652 (972)
+.+++++|+|+||+|..++..|+..|+ .+|+|++.+. -...|++.+++.+....+ ..+
T Consensus 146 l~gk~~lVlGAGGaaraia~~L~~~G~-----~~v~v~nRt~----------------~~~~~a~~la~~~~~~~~-~~v 203 (312)
T 3t4e_A 146 MRGKTMVLLGAGGAATAIGAQAAIEGI-----KEIKLFNRKD----------------DFFEKAVAFAKRVNENTD-CVV 203 (312)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC-----SEEEEEECSS----------------THHHHHHHHHHHHHHHSS-CEE
T ss_pred cCCCEEEEECcCHHHHHHHHHHHHcCC-----CEEEEEECCC----------------chHHHHHHHHHHhhhccC-cce
Confidence 567899999999999999999999999 8999985431 012577778887776543 344
Q ss_pred EEeecccCCCcccccchhccCCCcEEEEcc
Q 002073 653 EALQNRVGPETENVFDDTFWENITCVINAL 682 (972)
Q Consensus 653 ~~~~~~v~~~~e~i~~~~f~~~~DvVi~al 682 (972)
..+.. . +.+. + .+....+|+||||+
T Consensus 204 ~~~~~--~-~l~~-~-~~~l~~~DiIINaT 228 (312)
T 3t4e_A 204 TVTDL--A-DQHA-F-TEALASADILTNGT 228 (312)
T ss_dssp EEEET--T-CHHH-H-HHHHHHCSEEEECS
T ss_pred EEech--H-hhhh-h-HhhccCceEEEECC
Confidence 33321 1 0000 0 12345789999996
No 56
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=94.98 E-value=0.038 Score=60.06 Aligned_cols=73 Identities=19% Similarity=0.313 Sum_probs=53.0
Q ss_pred HhcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCcEE
Q 002073 573 LEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNI 652 (972)
Q Consensus 573 L~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~~I 652 (972)
+.+++++|+|+|++|..++..|+..|+ .+|+|++.+ ..|++.+++.+.... .+.+
T Consensus 124 l~~k~vlvlGaGg~g~aia~~L~~~G~-----~~v~v~~R~-------------------~~~a~~la~~~~~~~-~~~~ 178 (281)
T 3o8q_A 124 LKGATILLIGAGGAARGVLKPLLDQQP-----ASITVTNRT-------------------FAKAEQLAELVAAYG-EVKA 178 (281)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTCC-----SEEEEEESS-------------------HHHHHHHHHHHGGGS-CEEE
T ss_pred ccCCEEEEECchHHHHHHHHHHHhcCC-----CeEEEEECC-------------------HHHHHHHHHHhhccC-CeeE
Confidence 568899999999999999999999999 799998543 246777777766532 2222
Q ss_pred EEeecccCCCcccccchhccCCCcEEEEccC
Q 002073 653 EALQNRVGPETENVFDDTFWENITCVINALD 683 (972)
Q Consensus 653 ~~~~~~v~~~~e~i~~~~f~~~~DvVi~alD 683 (972)
..+. +.-.++|+||+|+-
T Consensus 179 ~~~~-------------~l~~~aDiIInaTp 196 (281)
T 3o8q_A 179 QAFE-------------QLKQSYDVIINSTS 196 (281)
T ss_dssp EEGG-------------GCCSCEEEEEECSC
T ss_pred eeHH-------------HhcCCCCEEEEcCc
Confidence 2111 11268999999984
No 57
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=94.97 E-value=0.033 Score=60.20 Aligned_cols=73 Identities=21% Similarity=0.310 Sum_probs=51.8
Q ss_pred HhcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCcEE
Q 002073 573 LEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNI 652 (972)
Q Consensus 573 L~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~~I 652 (972)
+.+++++|+|+||+|..++..|+..|+ .+|+|++.+ ..|++.+++.+.. . .+
T Consensus 118 l~~k~~lvlGaGg~~~aia~~L~~~G~-----~~v~i~~R~-------------------~~~a~~la~~~~~--~--~~ 169 (272)
T 3pwz_A 118 LRNRRVLLLGAGGAVRGALLPFLQAGP-----SELVIANRD-------------------MAKALALRNELDH--S--RL 169 (272)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTCC-----SEEEEECSC-------------------HHHHHHHHHHHCC--T--TE
T ss_pred ccCCEEEEECccHHHHHHHHHHHHcCC-----CEEEEEeCC-------------------HHHHHHHHHHhcc--C--Ce
Confidence 567899999999999999999999999 799998532 2467777776654 1 23
Q ss_pred EEeecccCCCcccccchhccCCCcEEEEccC
Q 002073 653 EALQNRVGPETENVFDDTFWENITCVINALD 683 (972)
Q Consensus 653 ~~~~~~v~~~~e~i~~~~f~~~~DvVi~alD 683 (972)
.+.. + +++ . . .++|+||||+-
T Consensus 170 ~~~~--~----~~l-~-~--~~~DivInaTp 190 (272)
T 3pwz_A 170 RISR--Y----EAL-E-G--QSFDIVVNATS 190 (272)
T ss_dssp EEEC--S----GGG-T-T--CCCSEEEECSS
T ss_pred eEee--H----HHh-c-c--cCCCEEEECCC
Confidence 3221 1 111 0 1 58999999973
No 58
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=94.88 E-value=0.043 Score=56.75 Aligned_cols=39 Identities=15% Similarity=0.239 Sum_probs=29.8
Q ss_pred HHHHHhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 569 LQKKLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 569 ~q~kL~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
...++++++|+|.|+ |+||.++++.|+..|. ++++++.+
T Consensus 15 ~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~------~V~~~~R~ 54 (236)
T 3e8x_A 15 ENLYFQGMRVLVVGANGKVARYLLSELKNKGH------EPVAMVRN 54 (236)
T ss_dssp ------CCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred cccCcCCCeEEEECCCChHHHHHHHHHHhCCC------eEEEEECC
Confidence 356788999999997 9999999999999997 88888743
No 59
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=94.78 E-value=0.16 Score=49.22 Aligned_cols=94 Identities=9% Similarity=0.116 Sum_probs=61.3
Q ss_pred hcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCcEEE
Q 002073 574 EDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIE 653 (972)
Q Consensus 574 ~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~~I~ 653 (972)
.+.+|+|+|+|.+|..+++.|...|. .++++|.|.- .+.+.+++. ...++.
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~------~V~vid~~~~------------------~~~~~~~~~---~~~~~~-- 52 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQ------NVTVISNLPE------------------DDIKQLEQR---LGDNAD-- 52 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTC------CEEEEECCCH------------------HHHHHHHHH---HCTTCE--
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC------CEEEEECCCh------------------HHHHHHHHh---hcCCCe--
Confidence 35789999999999999999999997 8999986521 111122221 112333
Q ss_pred EeecccCCCcccccchhccCCCcEEEEccCChHHHHHHhhhhhcc
Q 002073 654 ALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYF 698 (972)
Q Consensus 654 ~~~~~v~~~~e~i~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~~ 698 (972)
.+..... ....+...-++++|+||.++++.+.-..+...+...
T Consensus 53 ~i~gd~~--~~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~ 95 (153)
T 1id1_A 53 VIPGDSN--DSSVLKKAGIDRCRAILALSDNDADNAFVVLSAKDM 95 (153)
T ss_dssp EEESCTT--SHHHHHHHTTTTCSEEEECSSCHHHHHHHHHHHHHH
T ss_pred EEEcCCC--CHHHHHHcChhhCCEEEEecCChHHHHHHHHHHHHH
Confidence 3333322 122333344678999999999988777777776654
No 60
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=94.61 E-value=0.057 Score=62.58 Aligned_cols=91 Identities=19% Similarity=0.168 Sum_probs=66.5
Q ss_pred HhcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCcEE
Q 002073 573 LEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNI 652 (972)
Q Consensus 573 L~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~~I 652 (972)
|++++|+|||.|.+|...++.|...|. +++|+|.+.-+ .+.+... .. +|
T Consensus 10 l~~~~vlVvGgG~va~~k~~~L~~~ga------~V~vi~~~~~~---------------------~~~~l~~--~~--~i 58 (457)
T 1pjq_A 10 LRDRDCLIVGGGDVAERKARLLLEAGA------RLTVNALTFIP---------------------QFTVWAN--EG--ML 58 (457)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHTTB------EEEEEESSCCH---------------------HHHHHHT--TT--SC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCcC------EEEEEcCCCCH---------------------HHHHHHh--cC--CE
Confidence 568899999999999999999999997 99999974211 0111111 11 23
Q ss_pred EEeecccCCCcccccchhccCCCcEEEEccCChHHHHHHhhhhhccccce
Q 002073 653 EALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPL 702 (972)
Q Consensus 653 ~~~~~~v~~~~e~i~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~~~kPl 702 (972)
+.+...+ .+..+.++|+||-|+|+......+-..|...++|+
T Consensus 59 ~~~~~~~--------~~~~l~~~~lVi~at~~~~~n~~i~~~a~~~~i~v 100 (457)
T 1pjq_A 59 TLVEGPF--------DETLLDSCWLAIAATDDDTVNQRVSDAAESRRIFC 100 (457)
T ss_dssp EEEESSC--------CGGGGTTCSEEEECCSCHHHHHHHHHHHHHTTCEE
T ss_pred EEEECCC--------CccccCCccEEEEcCCCHHHHHHHHHHHHHcCCEE
Confidence 3333322 23446789999999999988888889999999996
No 61
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.57 E-value=0.079 Score=52.88 Aligned_cols=87 Identities=10% Similarity=0.028 Sum_probs=58.1
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHh-cCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEee
Q 002073 176 LFASNILVSGMQGLGAEIAKNLILA-GVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLT 254 (972)
Q Consensus 176 L~~s~VlIvG~gGlG~EiaKNLvLa-GVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~ 254 (972)
+.+.+|+|+|+|.+|..+|+.|... |. .++++|.+. .++ +.+++.. +.+ ..
T Consensus 37 ~~~~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~-------------------~~~----~~~~~~g--~~~--~~ 88 (183)
T 3c85_A 37 PGHAQVLILGMGRIGTGAYDELRARYGK-ISLGIEIRE-------------------EAA----QQHRSEG--RNV--IS 88 (183)
T ss_dssp CTTCSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCH-------------------HHH----HHHHHTT--CCE--EE
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCH-------------------HHH----HHHHHCC--CCE--EE
Confidence 4567999999999999999999999 97 688888533 122 2233332 222 22
Q ss_pred cCC-Chh----h--hcCCceEEEcCCCHHHHHHHHHHHHhcCC
Q 002073 255 SKL-TKE----Q--LSDFQAVVFTDISLDKAIEFDDFCHNHQP 290 (972)
Q Consensus 255 ~~l-~~e----~--l~~fdvVV~~~~~~~~~~~ln~~c~~~~~ 290 (972)
.+. +++ . +.++|+||.+..+......+-..+++.++
T Consensus 89 gd~~~~~~l~~~~~~~~ad~vi~~~~~~~~~~~~~~~~~~~~~ 131 (183)
T 3c85_A 89 GDATDPDFWERILDTGHVKLVLLAMPHHQGNQTALEQLQRRNY 131 (183)
T ss_dssp CCTTCHHHHHTBCSCCCCCEEEECCSSHHHHHHHHHHHHHTTC
T ss_pred cCCCCHHHHHhccCCCCCCEEEEeCCChHHHHHHHHHHHHHCC
Confidence 222 111 2 56789999988877666666667787764
No 62
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=94.49 E-value=0.067 Score=59.85 Aligned_cols=94 Identities=14% Similarity=0.156 Sum_probs=61.2
Q ss_pred hcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCcEEE
Q 002073 574 EDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIE 653 (972)
Q Consensus 574 ~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~~I~ 653 (972)
++.||+|+|||.+|..+++.|+.. ..++++|.+. .+.+ +..+.+.
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~~~-------~~v~~~~~~~-------------------~~~~-------~~~~~~~-- 59 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLKDE-------FDVYIGDVNN-------------------ENLE-------KVKEFAT-- 59 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT-------SEEEEEESCH-------------------HHHH-------HHTTTSE--
T ss_pred CccEEEEECCCHHHHHHHHHHhcC-------CCeEEEEcCH-------------------HHHH-------HHhccCC--
Confidence 456899999999999999998642 4788876432 1111 1222222
Q ss_pred EeecccCCCcccccchhccCCCcEEEEccCChHHHHHHhhhhhccccceEecc
Q 002073 654 ALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLESG 706 (972)
Q Consensus 654 ~~~~~v~~~~e~i~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~~~kPli~sg 706 (972)
.+.-.+.. .+.+ .++++++|+||+|+... .-..+.+.|...++.+++..
T Consensus 60 ~~~~d~~d-~~~l--~~~~~~~DvVi~~~p~~-~~~~v~~~~~~~g~~yvD~s 108 (365)
T 3abi_A 60 PLKVDASN-FDKL--VEVMKEFELVIGALPGF-LGFKSIKAAIKSKVDMVDVS 108 (365)
T ss_dssp EEECCTTC-HHHH--HHHHTTCSEEEECCCGG-GHHHHHHHHHHHTCEEEECC
T ss_pred cEEEecCC-HHHH--HHHHhCCCEEEEecCCc-ccchHHHHHHhcCcceEeee
Confidence 22222221 1222 35678999999999765 34578899999999999854
No 63
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=94.43 E-value=0.04 Score=63.94 Aligned_cols=102 Identities=14% Similarity=0.203 Sum_probs=66.5
Q ss_pred cCcEEEEcCCcchHHHHHHHHHcc-ccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCcEEE
Q 002073 575 DAKVFIVGSGALGCEFLKNVALMG-VSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIE 653 (972)
Q Consensus 575 ~~kVlIVGaGgiG~e~lknLa~~G-v~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~~I~ 653 (972)
+.||+|||+|++|+.++..|++.+ + .-..|+++|.|.... ++ .+.+ .+++.
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~~dv---~~~~I~vaD~~~~~~------------~~--------~~~~-----g~~~~ 64 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEKFDI---KPSQVTIIAAEGTKV------------DV--------AQQY-----GVSFK 64 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHHBCC---CGGGEEEEESSCCSC------------CH--------HHHH-----TCEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCC---ceeEEEEeccchhhh------------hH--------Hhhc-----CCcee
Confidence 578999999999999999999864 3 115899987654310 11 1111 23333
Q ss_pred EeecccCCCcc-cccchhccCCCcEEEEccCChHHHHHHhhhhhccccceEecccC
Q 002073 654 ALQNRVGPETE-NVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLESGTL 708 (972)
Q Consensus 654 ~~~~~v~~~~e-~i~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~~~kPli~sgt~ 708 (972)
...++.++. ... ..++++.|+|||+...... ..+-+.|...++-+++....
T Consensus 65 --~~~Vdadnv~~~l-~aLl~~~DvVIN~s~~~~~-l~Im~acleaGv~YlDTa~E 116 (480)
T 2ph5_A 65 --LQQITPQNYLEVI-GSTLEENDFLIDVSIGISS-LALIILCNQKGALYINAATE 116 (480)
T ss_dssp --ECCCCTTTHHHHT-GGGCCTTCEEEECCSSSCH-HHHHHHHHHHTCEEEESSCC
T ss_pred --EEeccchhHHHHH-HHHhcCCCEEEECCccccC-HHHHHHHHHcCCCEEECCCC
Confidence 334444322 111 2344556999998866655 56677999999999987753
No 64
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=94.43 E-value=0.055 Score=58.45 Aligned_cols=72 Identities=21% Similarity=0.232 Sum_probs=51.8
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEee-
Q 002073 176 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLT- 254 (972)
Q Consensus 176 L~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~- 254 (972)
+.+++|+|+|+||.|..++..|...|+++|++++.+. .|++..++.+.. ..+.+..
T Consensus 118 l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~-------------------~~a~~la~~~~~----~~~~~~~~ 174 (272)
T 3pwz_A 118 LRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDM-------------------AKALALRNELDH----SRLRISRY 174 (272)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCH-------------------HHHHHHHHHHCC----TTEEEECS
T ss_pred ccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCH-------------------HHHHHHHHHhcc----CCeeEeeH
Confidence 6788999999999999999999999999999986421 367766666543 1233322
Q ss_pred cCCChhhhcCCceEEEcCC
Q 002073 255 SKLTKEQLSDFQAVVFTDI 273 (972)
Q Consensus 255 ~~l~~e~l~~fdvVV~~~~ 273 (972)
+++.. .++|+||.|+.
T Consensus 175 ~~l~~---~~~DivInaTp 190 (272)
T 3pwz_A 175 EALEG---QSFDIVVNATS 190 (272)
T ss_dssp GGGTT---CCCSEEEECSS
T ss_pred HHhcc---cCCCEEEECCC
Confidence 11221 67899988763
No 65
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=94.39 E-value=0.1 Score=57.85 Aligned_cols=75 Identities=15% Similarity=0.151 Sum_probs=53.4
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcC----CCEEE
Q 002073 176 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNN----AVVLS 251 (972)
Q Consensus 176 L~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp----~V~V~ 251 (972)
|+..+|.|+|+|.+|..+|..|+..|...++|+|-+. .|++.....|+..++ .++|.
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~-------------------~~~~g~~~dl~~~~~~~~~~~~v~ 65 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE-------------------GTPQGKGLDIAESSPVDGFDAKFT 65 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS-------------------SHHHHHHHHHHHHHHHHTCCCCEE
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc-------------------hhHHHHHHHHhchhhhcCCCCEEE
Confidence 5677999999999999999999999988899998532 234333344544432 45555
Q ss_pred EeecCCChhhhcCCceEEEcC
Q 002073 252 TLTSKLTKEQLSDFQAVVFTD 272 (972)
Q Consensus 252 ~~~~~l~~e~l~~fdvVV~~~ 272 (972)
...+ .+.+++.|+||.+.
T Consensus 66 ~t~d---~~a~~~aDiVIiaa 83 (324)
T 3gvi_A 66 GAND---YAAIEGADVVIVTA 83 (324)
T ss_dssp EESS---GGGGTTCSEEEECC
T ss_pred EeCC---HHHHCCCCEEEEcc
Confidence 4332 36788999999985
No 66
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=94.39 E-value=0.12 Score=53.13 Aligned_cols=92 Identities=9% Similarity=0.107 Sum_probs=61.3
Q ss_pred eEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEeecCCC-
Q 002073 180 NILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKLT- 258 (972)
Q Consensus 180 ~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~~~l~- 258 (972)
+|+|+|+|.+|..+|+.|...|. .++++|.+. .+++ .+.+. ..+ .++.++.+
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~-~v~vid~~~-------------------~~~~----~l~~~-~~~--~~i~gd~~~ 54 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKY-GVVIINKDR-------------------ELCE----EFAKK-LKA--TIIHGDGSH 54 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTC-CEEEEESCH-------------------HHHH----HHHHH-SSS--EEEESCTTS
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEECCH-------------------HHHH----HHHHH-cCC--eEEEcCCCC
Confidence 79999999999999999999997 788888532 1222 22221 122 23333332
Q ss_pred h-----hhhcCCceEEEcCCCHHHHHHHHHHHHhcCCCceeEEeee
Q 002073 259 K-----EQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIKAEV 299 (972)
Q Consensus 259 ~-----e~l~~fdvVV~~~~~~~~~~~ln~~c~~~~~~IpfI~a~~ 299 (972)
+ ..+.++|+||++..+......+...+++..+ .+-|.+.+
T Consensus 55 ~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~-~~~iia~~ 99 (218)
T 3l4b_C 55 KEILRDAEVSKNDVVVILTPRDEVNLFIAQLVMKDFG-VKRVVSLV 99 (218)
T ss_dssp HHHHHHHTCCTTCEEEECCSCHHHHHHHHHHHHHTSC-CCEEEECC
T ss_pred HHHHHhcCcccCCEEEEecCCcHHHHHHHHHHHHHcC-CCeEEEEE
Confidence 2 2366889999999888877788888887432 44454444
No 67
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=94.38 E-value=0.13 Score=56.20 Aligned_cols=36 Identities=22% Similarity=0.173 Sum_probs=30.8
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCC
Q 002073 176 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 211 (972)
Q Consensus 176 L~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d 211 (972)
....+|.|||+|.+|..+|++|+.+|...|+++|.+
T Consensus 22 ~~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 22 SNAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 345689999999999999999999998789999865
No 68
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=94.26 E-value=0.024 Score=54.57 Aligned_cols=38 Identities=21% Similarity=0.351 Sum_probs=31.7
Q ss_pred HHHHhcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 570 QKKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 570 q~kL~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
..+....+|+|+|+|++|..+++.|...|+ . ++++|.+
T Consensus 16 ~~~~~~~~v~iiG~G~iG~~~a~~l~~~g~-----~-v~v~~r~ 53 (144)
T 3oj0_A 16 VRKNGGNKILLVGNGMLASEIAPYFSYPQY-----K-VTVAGRN 53 (144)
T ss_dssp HHHHCCCEEEEECCSHHHHHHGGGCCTTTC-----E-EEEEESC
T ss_pred HHhccCCEEEEECCCHHHHHHHHHHHhCCC-----E-EEEEcCC
Confidence 344458999999999999999999999888 5 8888743
No 69
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=94.20 E-value=0.077 Score=57.60 Aligned_cols=73 Identities=14% Similarity=0.193 Sum_probs=53.2
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEeec
Q 002073 176 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTS 255 (972)
Q Consensus 176 L~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~~ 255 (972)
+.+++|+|+|+||.|..++..|...|+++|++++.+ ..|++.+++.+.+.. .+.+..
T Consensus 124 l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~-------------------~~~a~~la~~~~~~~---~~~~~~- 180 (281)
T 3o8q_A 124 LKGATILLIGAGGAARGVLKPLLDQQPASITVTNRT-------------------FAKAEQLAELVAAYG---EVKAQA- 180 (281)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESS-------------------HHHHHHHHHHHGGGS---CEEEEE-
T ss_pred ccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECC-------------------HHHHHHHHHHhhccC---CeeEee-
Confidence 578899999999999999999999999999998742 236777777665432 233321
Q ss_pred CCChhhhcCCceEEEcCC
Q 002073 256 KLTKEQLSDFQAVVFTDI 273 (972)
Q Consensus 256 ~l~~e~l~~fdvVV~~~~ 273 (972)
+. +...++|+||.|+.
T Consensus 181 -~~-~l~~~aDiIInaTp 196 (281)
T 3o8q_A 181 -FE-QLKQSYDVIINSTS 196 (281)
T ss_dssp -GG-GCCSCEEEEEECSC
T ss_pred -HH-HhcCCCCEEEEcCc
Confidence 11 11267899998864
No 70
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=94.00 E-value=0.048 Score=52.45 Aligned_cols=72 Identities=18% Similarity=0.174 Sum_probs=49.9
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEeec
Q 002073 176 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTS 255 (972)
Q Consensus 176 L~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~~ 255 (972)
....+|+|+|+|++|..+++.|...|+. ++++|.+. .|++..++.+. +.+....
T Consensus 19 ~~~~~v~iiG~G~iG~~~a~~l~~~g~~-v~v~~r~~-------------------~~~~~~a~~~~-----~~~~~~~- 72 (144)
T 3oj0_A 19 NGGNKILLVGNGMLASEIAPYFSYPQYK-VTVAGRNI-------------------DHVRAFAEKYE-----YEYVLIN- 72 (144)
T ss_dssp HCCCEEEEECCSHHHHHHGGGCCTTTCE-EEEEESCH-------------------HHHHHHHHHHT-----CEEEECS-
T ss_pred ccCCEEEEECCCHHHHHHHHHHHhCCCE-EEEEcCCH-------------------HHHHHHHHHhC-----CceEeec-
Confidence 3488999999999999999999999987 99988532 24444443332 2332211
Q ss_pred CCChhhhcCCceEEEcCCC
Q 002073 256 KLTKEQLSDFQAVVFTDIS 274 (972)
Q Consensus 256 ~l~~e~l~~fdvVV~~~~~ 274 (972)
+ ..+.+.++|+||.|...
T Consensus 73 ~-~~~~~~~~Divi~at~~ 90 (144)
T 3oj0_A 73 D-IDSLIKNNDVIITATSS 90 (144)
T ss_dssp C-HHHHHHTCSEEEECSCC
T ss_pred C-HHHHhcCCCEEEEeCCC
Confidence 1 23467789999998754
No 71
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=93.99 E-value=0.076 Score=54.67 Aligned_cols=88 Identities=13% Similarity=0.142 Sum_probs=58.7
Q ss_pred CcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCcEEEEe
Q 002073 576 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEAL 655 (972)
Q Consensus 576 ~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~~I~~~ 655 (972)
.+|+|+|+|.+|..+++.|...|. .++++|.|. .+++.+++. .+.. .+
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~------~v~vid~~~-------------------~~~~~l~~~-----~~~~--~i 48 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKY------GVVIINKDR-------------------ELCEEFAKK-----LKAT--II 48 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTC------CEEEEESCH-------------------HHHHHHHHH-----SSSE--EE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC------eEEEEECCH-------------------HHHHHHHHH-----cCCe--EE
Confidence 379999999999999999999998 899998543 122222211 1222 23
Q ss_pred ecccCCCcccccchhccCCCcEEEEccCChHHHHHHhhhhhc
Q 002073 656 QNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLY 697 (972)
Q Consensus 656 ~~~v~~~~e~i~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~ 697 (972)
..... ....+...-.+++|+||.++++......+...+..
T Consensus 49 ~gd~~--~~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~ 88 (218)
T 3l4b_C 49 HGDGS--HKEILRDAEVSKNDVVVILTPRDEVNLFIAQLVMK 88 (218)
T ss_dssp ESCTT--SHHHHHHHTCCTTCEEEECCSCHHHHHHHHHHHHH
T ss_pred EcCCC--CHHHHHhcCcccCCEEEEecCCcHHHHHHHHHHHH
Confidence 33322 12233334467899999999998877777776664
No 72
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=93.93 E-value=0.035 Score=62.13 Aligned_cols=87 Identities=15% Similarity=0.197 Sum_probs=57.4
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEeecCC
Q 002073 178 ASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKL 257 (972)
Q Consensus 178 ~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~~~l 257 (972)
+.||+|+|+|.+|..+|+.|.. -..+++.|.+ . +++..+.+.+.. ..-++
T Consensus 16 ~mkilvlGaG~vG~~~~~~L~~--~~~v~~~~~~-------------------~-------~~~~~~~~~~~~--~~~d~ 65 (365)
T 3abi_A 16 HMKVLILGAGNIGRAIAWDLKD--EFDVYIGDVN-------------------N-------ENLEKVKEFATP--LKVDA 65 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTT--TSEEEEEESC-------------------H-------HHHHHHTTTSEE--EECCT
T ss_pred ccEEEEECCCHHHHHHHHHHhc--CCCeEEEEcC-------------------H-------HHHHHHhccCCc--EEEec
Confidence 4479999999999999999854 3567776531 1 122333333322 11122
Q ss_pred C-----hhhhcCCceEEEcCCCHHHHHHHHHHHHhcCCCceeEEe
Q 002073 258 T-----KEQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIKA 297 (972)
Q Consensus 258 ~-----~e~l~~fdvVV~~~~~~~~~~~ln~~c~~~~~~IpfI~a 297 (972)
+ .+.++++|+||.|..+. ....+.+.|.+.+ +.++..
T Consensus 66 ~d~~~l~~~~~~~DvVi~~~p~~-~~~~v~~~~~~~g--~~yvD~ 107 (365)
T 3abi_A 66 SNFDKLVEVMKEFELVIGALPGF-LGFKSIKAAIKSK--VDMVDV 107 (365)
T ss_dssp TCHHHHHHHHTTCSEEEECCCGG-GHHHHHHHHHHHT--CEEEEC
T ss_pred CCHHHHHHHHhCCCEEEEecCCc-ccchHHHHHHhcC--cceEee
Confidence 2 24678999999887543 4567889999999 887764
No 73
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=93.81 E-value=0.11 Score=56.42 Aligned_cols=38 Identities=21% Similarity=0.352 Sum_probs=34.4
Q ss_pred HHhcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCc
Q 002073 572 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDV 614 (972)
Q Consensus 572 kL~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~ 614 (972)
.+.+++++|+|+|++|..++..|+..|+ .+|+|++.+.
T Consensus 114 ~l~~k~vlvlGaGg~g~aia~~L~~~G~-----~~v~v~~R~~ 151 (277)
T 3don_A 114 GIEDAYILILGAGGASKGIANELYKIVR-----PTLTVANRTM 151 (277)
T ss_dssp TGGGCCEEEECCSHHHHHHHHHHHTTCC-----SCCEEECSCG
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCC-----CEEEEEeCCH
Confidence 3678999999999999999999999999 8999997664
No 74
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=93.77 E-value=0.17 Score=52.14 Aligned_cols=101 Identities=18% Similarity=0.126 Sum_probs=60.7
Q ss_pred HHHHhhcCeEEEEcC-ChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEE
Q 002073 172 TMRRLFASNILVSGM-QGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVL 250 (972)
Q Consensus 172 ~q~kL~~s~VlIvG~-gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V 250 (972)
.+.+|++.+|+|.|+ |++|.++++.|+..|. +|++++.+.- +.+ .+.+. .+
T Consensus 15 ~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~~-------------------~~~----~~~~~----~~ 66 (236)
T 3e8x_A 15 ENLYFQGMRVLVVGANGKVARYLLSELKNKGH-EPVAMVRNEE-------------------QGP----ELRER----GA 66 (236)
T ss_dssp ------CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSGG-------------------GHH----HHHHT----TC
T ss_pred cccCcCCCeEEEECCCChHHHHHHHHHHhCCC-eEEEEECChH-------------------HHH----HHHhC----CC
Confidence 356788999999997 9999999999999996 7888874321 111 12221 23
Q ss_pred -EEeecCCC---hhhhcCCceEEEcCC-------------CHHHHHHHHHHHHhcCCCceeEEeeecc
Q 002073 251 -STLTSKLT---KEQLSDFQAVVFTDI-------------SLDKAIEFDDFCHNHQPAISFIKAEVRG 301 (972)
Q Consensus 251 -~~~~~~l~---~e~l~~fdvVV~~~~-------------~~~~~~~ln~~c~~~~~~IpfI~a~~~G 301 (972)
+.+..+++ .+.+.+.|+||.+.. +......+-+.|++.+. -.||..++.|
T Consensus 67 ~~~~~~Dl~~~~~~~~~~~D~vi~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~iv~~SS~~ 133 (236)
T 3e8x_A 67 SDIVVANLEEDFSHAFASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGI-KRFIMVSSVG 133 (236)
T ss_dssp SEEEECCTTSCCGGGGTTCSEEEECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTC-CEEEEECCTT
T ss_pred ceEEEcccHHHHHHHHcCCCEEEECCCCCCCCCccccchhhHHHHHHHHHHHHHcCC-CEEEEEecCC
Confidence 34444444 235678899997653 12223456677877761 2466666644
No 75
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=93.76 E-value=0.33 Score=52.94 Aligned_cols=73 Identities=22% Similarity=0.255 Sum_probs=50.8
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcC-CEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhc----CCCEEEEe
Q 002073 179 SNILVSGMQGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELN----NAVVLSTL 253 (972)
Q Consensus 179 s~VlIvG~gGlG~EiaKNLvLaGV-g~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLN----p~V~V~~~ 253 (972)
.+|.|+|+|.+|..+|..|+..|+ ..++++|.+. .|++.....+...+ ..+.+.
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~-------------------~~~~~~~~~l~~~~~~~~~~~~~~-- 60 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE-------------------AKVKADQIDFQDAMANLEAHGNIV-- 60 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH-------------------HHHHHHHHHHHHHGGGSSSCCEEE--
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH-------------------HHHHHHHHHHHhhhhhcCCCeEEE--
Confidence 479999999999999999999996 7899998532 24444444443332 223443
Q ss_pred ecCCChhhhcCCceEEEcCCC
Q 002073 254 TSKLTKEQLSDFQAVVFTDIS 274 (972)
Q Consensus 254 ~~~l~~e~l~~fdvVV~~~~~ 274 (972)
..++ +.++++|+||.|...
T Consensus 61 ~~d~--~~~~~aDvViiav~~ 79 (309)
T 1hyh_A 61 INDW--AALADADVVISTLGN 79 (309)
T ss_dssp ESCG--GGGTTCSEEEECCSC
T ss_pred eCCH--HHhCCCCEEEEecCC
Confidence 2333 567899999998764
No 76
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=93.74 E-value=0.15 Score=56.04 Aligned_cols=78 Identities=17% Similarity=0.253 Sum_probs=53.1
Q ss_pred HHHhhcCeEEEEcCChHHHHHHHHHHHhcC-CEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhc----CC
Q 002073 173 MRRLFASNILVSGMQGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELN----NA 247 (972)
Q Consensus 173 q~kL~~s~VlIvG~gGlG~EiaKNLvLaGV-g~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLN----p~ 247 (972)
|+++...+|.|+|+|.+|..++..|+..|. .++.|+|-+. .|++..+..|.... ..
T Consensus 1 m~~m~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~-------------------~~~~g~~~dl~~~~~~~~~~ 61 (317)
T 3d0o_A 1 MNKFKGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDT-------------------EKVRGDVMDLKHATPYSPTT 61 (317)
T ss_dssp ---CCCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCH-------------------HHHHHHHHHHHHHGGGSSSC
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh-------------------hHhhhhhhhHHhhhhhcCCC
Confidence 456677899999999999999999999986 7899998531 23333333333322 34
Q ss_pred CEEEEeecCCChhhhcCCceEEEcCC
Q 002073 248 VVLSTLTSKLTKEQLSDFQAVVFTDI 273 (972)
Q Consensus 248 V~V~~~~~~l~~e~l~~fdvVV~~~~ 273 (972)
+++.. + +.+.+++.|+||.+..
T Consensus 62 ~~v~~--~--~~~a~~~aDvVvi~ag 83 (317)
T 3d0o_A 62 VRVKA--G--EYSDCHDADLVVICAG 83 (317)
T ss_dssp CEEEE--C--CGGGGTTCSEEEECCC
T ss_pred eEEEe--C--CHHHhCCCCEEEECCC
Confidence 55654 2 3556899999999864
No 77
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=93.73 E-value=0.17 Score=57.67 Aligned_cols=95 Identities=14% Similarity=0.268 Sum_probs=65.6
Q ss_pred CeEEEEcCChHHHHHHHHHHHhc-C-CEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEeecC
Q 002073 179 SNILVSGMQGLGAEIAKNLILAG-V-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSK 256 (972)
Q Consensus 179 s~VlIvG~gGlG~EiaKNLvLaG-V-g~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~~~ 256 (972)
.+|+|+|+|++|..+++.|+..| + ..+++.|.+ ..|++..++.+....+ ..+.....+
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~-------------------~~~~~~la~~l~~~~~-~~~~~~~~D 61 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRT-------------------LSKCQEIAQSIKAKGY-GEIDITTVD 61 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESC-------------------HHHHHHHHHHHHHTTC-CCCEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECC-------------------HHHHHHHHHHhhhhcC-CceEEEEec
Confidence 48999999999999999999988 4 689998753 2366666666655432 123344444
Q ss_pred CCh-----hhhcC--CceEEEcCCCHHHHHHHHHHHHhcCCCceeEE
Q 002073 257 LTK-----EQLSD--FQAVVFTDISLDKAIEFDDFCHNHQPAISFIK 296 (972)
Q Consensus 257 l~~-----e~l~~--fdvVV~~~~~~~~~~~ln~~c~~~~~~IpfI~ 296 (972)
+++ +.+++ .|+||.|..+.. ...+.+.|.+.+ +.++.
T Consensus 62 ~~d~~~l~~~l~~~~~DvVin~ag~~~-~~~v~~a~l~~g--~~vvD 105 (405)
T 4ina_A 62 ADSIEELVALINEVKPQIVLNIALPYQ-DLTIMEACLRTG--VPYLD 105 (405)
T ss_dssp TTCHHHHHHHHHHHCCSEEEECSCGGG-HHHHHHHHHHHT--CCEEE
T ss_pred CCCHHHHHHHHHhhCCCEEEECCCccc-ChHHHHHHHHhC--CCEEE
Confidence 432 34555 899998876433 456778899999 77775
No 78
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=93.72 E-value=0.045 Score=59.82 Aligned_cols=36 Identities=22% Similarity=0.271 Sum_probs=33.2
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCC
Q 002073 176 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 211 (972)
Q Consensus 176 L~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d 211 (972)
+..++|+|+|+||+|..++..|...|+++|+++|.+
T Consensus 139 l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~ 174 (297)
T 2egg_A 139 LDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRT 174 (297)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSS
T ss_pred CCCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 568899999999999999999999999999998753
No 79
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=93.58 E-value=0.065 Score=60.30 Aligned_cols=94 Identities=14% Similarity=0.142 Sum_probs=61.1
Q ss_pred hcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCcEEE
Q 002073 574 EDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIE 653 (972)
Q Consensus 574 ~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~~I~ 653 (972)
++++|+|+|+|++|..+++.|++. . +++|.|.+. .|++.+++. ...
T Consensus 15 ~~~~v~IiGaG~iG~~ia~~L~~~-~------~V~V~~R~~-------------------~~a~~la~~-------~~~- 60 (365)
T 2z2v_A 15 RHMKVLILGAGNIGRAIAWDLKDE-F------DVYIGDVNN-------------------ENLEKVKEF-------ATP- 60 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT-S------EEEEEESCH-------------------HHHHHHTTT-------SEE-
T ss_pred CCCeEEEEcCCHHHHHHHHHHHcC-C------eEEEEECCH-------------------HHHHHHHhh-------CCe-
Confidence 578999999999999999999987 4 788886432 233333321 111
Q ss_pred EeecccCCCcccccchhccCCCcEEEEccCChHHHHHHhhhhhccccceEecc
Q 002073 654 ALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLESG 706 (972)
Q Consensus 654 ~~~~~v~~~~e~i~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~~~kPli~sg 706 (972)
....+.. .+.+ .+.++++|+||+|+.... -..+...|...++.+++..
T Consensus 61 -~~~d~~~-~~~l--~~ll~~~DvVIn~~P~~~-~~~v~~a~l~~G~~~vD~s 108 (365)
T 2z2v_A 61 -LKVDASN-FDKL--VEVMKEFELVIGALPGFL-GFKSIKAAIKSKVDMVDVS 108 (365)
T ss_dssp -EECCTTC-HHHH--HHHHTTCSCEEECCCHHH-HHHHHHHHHHTTCCEEECC
T ss_pred -EEEecCC-HHHH--HHHHhCCCEEEECCChhh-hHHHHHHHHHhCCeEEEcc
Confidence 1111111 1111 345678999999986443 3347788999999999854
No 80
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=93.51 E-value=0.26 Score=54.12 Aligned_cols=72 Identities=18% Similarity=0.254 Sum_probs=51.2
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcC-CEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcC----CCEEEE
Q 002073 178 ASNILVSGMQGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNN----AVVLST 252 (972)
Q Consensus 178 ~s~VlIvG~gGlG~EiaKNLvLaGV-g~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp----~V~V~~ 252 (972)
..+|.|+|+|.+|..+|..|...|. ++|+++|.+. .|++..+..|....+ .+++..
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~-------------------~~~~~~~~dl~~~~~~~~~~~~i~~ 66 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE-------------------SKAIGDAMDFNHGKVFAPKPVDIWH 66 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH-------------------HHHHHHHHHHHHHTTSSSSCCEEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc-------------------chHHHHHhhHHHHhhhcCCCeEEEc
Confidence 3689999999999999999999984 7899998531 144444444544444 455553
Q ss_pred eecCCChhhhcCCceEEEcC
Q 002073 253 LTSKLTKEQLSDFQAVVFTD 272 (972)
Q Consensus 253 ~~~~l~~e~l~~fdvVV~~~ 272 (972)
+ +.+.+++.|+||.|.
T Consensus 67 --~--~~~al~~aDvViia~ 82 (316)
T 1ldn_A 67 --G--DYDDCRDADLVVICA 82 (316)
T ss_dssp --C--CGGGTTTCSEEEECC
T ss_pred --C--cHHHhCCCCEEEEcC
Confidence 2 245688999999984
No 81
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=93.50 E-value=0.38 Score=52.72 Aligned_cols=71 Identities=20% Similarity=0.239 Sum_probs=51.1
Q ss_pred eEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHH----hcCCCEEEEeec
Q 002073 180 NILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQE----LNNAVVLSTLTS 255 (972)
Q Consensus 180 ~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~e----LNp~V~V~~~~~ 255 (972)
+|.|+|+|.+|..+|..|+..|+++|+|+|-+. .|++..+..|.+ ++..++++...+
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~-------------------~~~~g~~~dl~~~~~~~~~~~~i~~t~d 61 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTP-------------------GKPQGEALDLAHAAAELGVDIRISGSNS 61 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSST-------------------THHHHHHHHHHHHHHHHTCCCCEEEESC
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCCh-------------------hhHHHHHHHHHHhhhhcCCCeEEEECCC
Confidence 689999999999999999999996699998531 233333334433 455666765432
Q ss_pred CCChhhhcCCceEEEcC
Q 002073 256 KLTKEQLSDFQAVVFTD 272 (972)
Q Consensus 256 ~l~~e~l~~fdvVV~~~ 272 (972)
.+.+++.|+||.+.
T Consensus 62 ---~~a~~~aD~Vi~~a 75 (308)
T 2d4a_B 62 ---YEDMRGSDIVLVTA 75 (308)
T ss_dssp ---GGGGTTCSEEEECC
T ss_pred ---HHHhCCCCEEEEeC
Confidence 24688999999983
No 82
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=93.48 E-value=0.05 Score=61.23 Aligned_cols=88 Identities=14% Similarity=0.086 Sum_probs=58.3
Q ss_pred hcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEeecC
Q 002073 177 FASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSK 256 (972)
Q Consensus 177 ~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~~~ 256 (972)
++++|+|+|+|++|..+|++|+.. ..|++.|.+. .|++..+ ..... ..-+
T Consensus 15 ~~~~v~IiGaG~iG~~ia~~L~~~--~~V~V~~R~~-------------------~~a~~la-------~~~~~--~~~d 64 (365)
T 2z2v_A 15 RHMKVLILGAGNIGRAIAWDLKDE--FDVYIGDVNN-------------------ENLEKVK-------EFATP--LKVD 64 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT--SEEEEEESCH-------------------HHHHHHT-------TTSEE--EECC
T ss_pred CCCeEEEEcCCHHHHHHHHHHHcC--CeEEEEECCH-------------------HHHHHHH-------hhCCe--EEEe
Confidence 578999999999999999999988 6888887432 1333222 12221 1111
Q ss_pred C-C----hhhhcCCceEEEcCCCHHHHHHHHHHHHhcCCCceeEEe
Q 002073 257 L-T----KEQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIKA 297 (972)
Q Consensus 257 l-~----~e~l~~fdvVV~~~~~~~~~~~ln~~c~~~~~~IpfI~a 297 (972)
+ + .+.++++|+||.|. +......+.+.|-+.+ +.+++.
T Consensus 65 ~~~~~~l~~ll~~~DvVIn~~-P~~~~~~v~~a~l~~G--~~~vD~ 107 (365)
T 2z2v_A 65 ASNFDKLVEVMKEFELVIGAL-PGFLGFKSIKAAIKSK--VDMVDV 107 (365)
T ss_dssp TTCHHHHHHHHTTCSCEEECC-CHHHHHHHHHHHHHTT--CCEEEC
T ss_pred cCCHHHHHHHHhCCCEEEECC-ChhhhHHHHHHHHHhC--CeEEEc
Confidence 1 1 24577899999985 4444456778899988 776653
No 83
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=93.47 E-value=0.17 Score=55.96 Aligned_cols=75 Identities=15% Similarity=0.188 Sum_probs=53.5
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhc----CCCEEE
Q 002073 176 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELN----NAVVLS 251 (972)
Q Consensus 176 L~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLN----p~V~V~ 251 (972)
|...+|.|+|+|.+|..+|..|+..|+++++|+|-+. .|++..+..|+... ..+.|.
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~-------------------~~~~g~a~dL~~~~~~~~~~~~v~ 63 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ-------------------GMPNGKALDLLQTCPIEGVDFKVR 63 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS-------------------SHHHHHHHHHHTTHHHHTCCCCEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh-------------------HHHHHHHHHHHhhhhhcCCCcEEE
Confidence 4567999999999999999999999988899998532 23333344444432 345555
Q ss_pred EeecCCChhhhcCCceEEEcC
Q 002073 252 TLTSKLTKEQLSDFQAVVFTD 272 (972)
Q Consensus 252 ~~~~~l~~e~l~~fdvVV~~~ 272 (972)
... +.+.+++.|+||.+.
T Consensus 64 ~t~---d~~a~~~aDvVIi~a 81 (321)
T 3p7m_A 64 GTN---DYKDLENSDVVIVTA 81 (321)
T ss_dssp EES---CGGGGTTCSEEEECC
T ss_pred EcC---CHHHHCCCCEEEEcC
Confidence 432 246788999999984
No 84
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=93.33 E-value=0.15 Score=52.95 Aligned_cols=92 Identities=17% Similarity=0.142 Sum_probs=62.1
Q ss_pred hcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEeecC
Q 002073 177 FASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSK 256 (972)
Q Consensus 177 ~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~~~ 256 (972)
...+|+|+|+|.+|..+++.|...|. ++++|.+.- ++ +.+. +.+ .+...+
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~--v~vid~~~~-------------------~~----~~~~---~~~--~~i~gd 57 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV--FVLAEDENV-------------------RK----KVLR---SGA--NFVHGD 57 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE--EEEESCGGG-------------------HH----HHHH---TTC--EEEESC
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe--EEEEECCHH-------------------HH----HHHh---cCC--eEEEcC
Confidence 35689999999999999999999887 888875321 11 2222 333 334444
Q ss_pred CC-hh-----hhcCCceEEEcCCCHHHHHHHHHHHHhcCCCceeEEeee
Q 002073 257 LT-KE-----QLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIKAEV 299 (972)
Q Consensus 257 l~-~e-----~l~~fdvVV~~~~~~~~~~~ln~~c~~~~~~IpfI~a~~ 299 (972)
.+ ++ .+.++|+||++..+.+....+...+++.++++ .|.+.+
T Consensus 58 ~~~~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~~~-~iia~~ 105 (234)
T 2aef_A 58 PTRVSDLEKANVRGARAVIVDLESDSETIHCILGIRKIDESV-RIIAEA 105 (234)
T ss_dssp TTCHHHHHHTTCTTCSEEEECCSCHHHHHHHHHHHHHHCSSS-EEEEEC
T ss_pred CCCHHHHHhcCcchhcEEEEcCCCcHHHHHHHHHHHHHCCCC-eEEEEE
Confidence 33 22 36688999999888777788888899988433 344333
No 85
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=93.31 E-value=0.16 Score=52.19 Aligned_cols=37 Identities=19% Similarity=0.334 Sum_probs=29.2
Q ss_pred HHHhcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 571 KKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 571 ~kL~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
.++...+|.|||+|.+|+.+++.|+..|. +++++|.+
T Consensus 15 ~~~~~~~I~iiG~G~mG~~la~~l~~~g~------~V~~~~~~ 51 (209)
T 2raf_A 15 LYFQGMEITIFGKGNMGQAIGHNFEIAGH------EVTYYGSK 51 (209)
T ss_dssp -----CEEEEECCSHHHHHHHHHHHHTTC------EEEEECTT
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHCCC------EEEEEcCC
Confidence 35677899999999999999999999997 78888754
No 86
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=93.24 E-value=0.25 Score=53.22 Aligned_cols=90 Identities=14% Similarity=0.197 Sum_probs=63.9
Q ss_pred HHHHHhcCcEEEEcC-CcchHHHHHHHHHccccCCCCc--eEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHh
Q 002073 569 LQKKLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQG--KLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATS 645 (972)
Q Consensus 569 ~q~kL~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g--~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~ 645 (972)
.-..|.+++++|.|+ ||||.++++.|+..|. + +++++|.+ ..+.+.+++.+..
T Consensus 27 ~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~-----~~~~V~~~~r~-------------------~~~~~~~~~~l~~ 82 (287)
T 3rku_A 27 AAERLAKKTVLITGASAGIGKATALEYLEASN-----GDMKLILAARR-------------------LEKLEELKKTIDQ 82 (287)
T ss_dssp HHHHHTTCEEEEESTTSHHHHHHHHHHHHHHT-----TCSEEEEEESC-------------------HHHHHHHHHHHHH
T ss_pred chhhcCCCEEEEecCCChHHHHHHHHHHHcCC-----CCceEEEEECC-------------------HHHHHHHHHHHHh
Confidence 346788999999995 8899999999999987 4 77777643 2355667777777
Q ss_pred hCCCcEEEEeecccCCCcc--cccc--hhccCCCcEEEEcc
Q 002073 646 INPRLNIEALQNRVGPETE--NVFD--DTFWENITCVINAL 682 (972)
Q Consensus 646 inP~~~I~~~~~~v~~~~e--~i~~--~~f~~~~DvVi~al 682 (972)
.+|..++..+...++.... ..+. .+-+...|++|++.
T Consensus 83 ~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnA 123 (287)
T 3rku_A 83 EFPNAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNA 123 (287)
T ss_dssp HCTTCEEEEEECCTTCGGGHHHHHHTSCGGGCSCCEEEECC
T ss_pred hCCCCeEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 7777888888877764321 1111 12245789998864
No 87
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=93.17 E-value=0.37 Score=47.88 Aligned_cols=34 Identities=21% Similarity=0.235 Sum_probs=29.5
Q ss_pred cCeEEEEcC-ChHHHHHHHHHHHhcCCEEEEEeCCc
Q 002073 178 ASNILVSGM-QGLGAEIAKNLILAGVKSVTLHDEGT 212 (972)
Q Consensus 178 ~s~VlIvG~-gGlG~EiaKNLvLaGVg~itLvD~d~ 212 (972)
+.+|+|.|. |++|.++++.|...|. ++++++.+.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g~-~V~~~~r~~ 37 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAGY-EVTVLVRDS 37 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCG
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCh
Confidence 468999997 9999999999999994 888888654
No 88
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=93.13 E-value=0.61 Score=50.83 Aligned_cols=109 Identities=13% Similarity=0.184 Sum_probs=69.0
Q ss_pred HHhhcCeEEEEcC-ChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCC---CE
Q 002073 174 RRLFASNILVSGM-QGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNA---VV 249 (972)
Q Consensus 174 ~kL~~s~VlIvG~-gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~---V~ 249 (972)
..++..+|||.|. |.+|..+++.|...|. +|+.++...-. .......+..+.+. -.
T Consensus 21 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~-------------------~~~~~~~~~~~~~~~~~~~ 80 (351)
T 3ruf_A 21 LIFSPKTWLITGVAGFIGSNLLEKLLKLNQ-VVIGLDNFSTG-------------------HQYNLDEVKTLVSTEQWSR 80 (351)
T ss_dssp HHHSCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSC-------------------CHHHHHHHHHTSCHHHHTT
T ss_pred CCCCCCeEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCCC-------------------chhhhhhhhhccccccCCc
Confidence 3567889999995 8899999999999995 78877753210 01112223322210 24
Q ss_pred EEEeecCCCh-----hhhcCCceEEEcCCC--H---------------HHHHHHHHHHHhcCCCc-eeEEeeecceeE
Q 002073 250 LSTLTSKLTK-----EQLSDFQAVVFTDIS--L---------------DKAIEFDDFCHNHQPAI-SFIKAEVRGLFG 304 (972)
Q Consensus 250 V~~~~~~l~~-----e~l~~fdvVV~~~~~--~---------------~~~~~ln~~c~~~~~~I-pfI~a~~~G~~G 304 (972)
++.+..++++ +.+.++|+||.+... . .....+-+.|++.+ + .||..++.+.+|
T Consensus 81 ~~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~~v~~SS~~vyg 156 (351)
T 3ruf_A 81 FCFIEGDIRDLTTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQ--VQSFTYAASSSTYG 156 (351)
T ss_dssp EEEEECCTTCHHHHHHHTTTCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT--CSEEEEEEEGGGGT
T ss_pred eEEEEccCCCHHHHHHHhcCCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEEecHHhcC
Confidence 5556666643 356689999977542 1 11224667788887 5 788888877765
No 89
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=93.03 E-value=0.46 Score=51.68 Aligned_cols=110 Identities=18% Similarity=0.214 Sum_probs=65.7
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhc--CCCEEEEeec
Q 002073 178 ASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELN--NAVVLSTLTS 255 (972)
Q Consensus 178 ~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLN--p~V~V~~~~~ 255 (972)
+.||.+||+|-.|..+|+||+.+|. .++++|.+.-....+... |-..+. .+.++- .++-+.....
T Consensus 5 s~kIgfIGLG~MG~~mA~~L~~~G~-~V~v~dr~~~~~~~l~~~--------G~~~~~----s~~e~~~~~dvvi~~l~~ 71 (297)
T 4gbj_A 5 SEKIAFLGLGNLGTPIAEILLEAGY-ELVVWNRTASKAEPLTKL--------GATVVE----NAIDAITPGGIVFSVLAD 71 (297)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTC-EEEEC-------CTTTTT--------TCEECS----SGGGGCCTTCEEEECCSS
T ss_pred CCcEEEEecHHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHc--------CCeEeC----CHHHHHhcCCceeeeccc
Confidence 4589999999999999999999997 799998655443333221 111111 111222 2333333222
Q ss_pred C------CCh---hhhcCCceEEEcC-CCHHHHHHHHHHHHhcCCCceeEEeeecce
Q 002073 256 K------LTK---EQLSDFQAVVFTD-ISLDKAIEFDDFCHNHQPAISFIKAEVRGL 302 (972)
Q Consensus 256 ~------l~~---e~l~~fdvVV~~~-~~~~~~~~ln~~c~~~~~~IpfI~a~~~G~ 302 (972)
. +.. ..+..-++||++. .+++...++.+.+.+++ +.|+.+.+.|.
T Consensus 72 ~~~~~~v~~~~~~~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g--~~~ldapVsGg 126 (297)
T 4gbj_A 72 DAAVEELFSMELVEKLGKDGVHVSMSTISPETSRQLAQVHEWYG--AHYVGAPIFAR 126 (297)
T ss_dssp HHHHHHHSCHHHHHHHCTTCEEEECSCCCHHHHHHHHHHHHHTT--CEEEECCEECC
T ss_pred hhhHHHHHHHHHHhhcCCCeEEEECCCCChHHHHHHHHHHHhcC--CceecCCcCCC
Confidence 1 111 1234446777655 47888889999999999 99998887663
No 90
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=93.02 E-value=0.25 Score=53.09 Aligned_cols=36 Identities=25% Similarity=0.343 Sum_probs=32.5
Q ss_pred HhhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCC
Q 002073 175 RLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 211 (972)
Q Consensus 175 kL~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d 211 (972)
.+...+|+|+|+|++|..+++.|...|+ +|+++|.+
T Consensus 126 ~~~~~~v~iiGaG~~g~aia~~L~~~g~-~V~v~~r~ 161 (275)
T 2hk9_A 126 EVKEKSILVLGAGGASRAVIYALVKEGA-KVFLWNRT 161 (275)
T ss_dssp TGGGSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSS
T ss_pred CcCCCEEEEECchHHHHHHHHHHHHcCC-EEEEEECC
Confidence 3678899999999999999999999999 99998753
No 91
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=92.98 E-value=0.16 Score=56.93 Aligned_cols=115 Identities=17% Similarity=0.197 Sum_probs=68.7
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHh-cCCCEEEEee
Q 002073 176 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQEL-NNAVVLSTLT 254 (972)
Q Consensus 176 L~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eL-Np~V~V~~~~ 254 (972)
|+..+|.|||+|.+|..+|++|...|. .|+++|.+.-....+... |-..+....+.++.. .|++-+....
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~G~-~V~v~dr~~~~~~~l~~~--------g~~~~~s~~e~~~~a~~~DvVi~~vp 90 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKGGH-ECVVYDLNVNAVQALERE--------GIAGARSIEEFCAKLVKPRVVWLMVP 90 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTT--------TCBCCSSHHHHHHHSCSSCEEEECSC
T ss_pred hcCCEEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHC--------CCEEeCCHHHHHhcCCCCCEEEEeCC
Confidence 345789999999999999999999995 899999765332222211 100011111222222 2455555444
Q ss_pred cCCChh-------hhcCCceEEEcCC-CHHHHHHHHHHHHhcCCCceeEEeeecc
Q 002073 255 SKLTKE-------QLSDFQAVVFTDI-SLDKAIEFDDFCHNHQPAISFIKAEVRG 301 (972)
Q Consensus 255 ~~l~~e-------~l~~fdvVV~~~~-~~~~~~~ln~~c~~~~~~IpfI~a~~~G 301 (972)
....++ .++.-++||++.. ......++.+.+.+++ +.|+.+.+.|
T Consensus 91 ~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g--~~~vdapVsG 143 (358)
T 4e21_A 91 AAVVDSMLQRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQG--ITYVDVGTSG 143 (358)
T ss_dssp GGGHHHHHHHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTT--CEEEEEEEEC
T ss_pred HHHHHHHHHHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCC--CEEEeCCCCC
Confidence 331111 2334467777654 5566677788888888 8888877655
No 92
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=92.83 E-value=0.3 Score=53.54 Aligned_cols=84 Identities=13% Similarity=-0.003 Sum_probs=53.5
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEeecCC
Q 002073 178 ASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKL 257 (972)
Q Consensus 178 ~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~~~l 257 (972)
..+|.|||+|.+|..+|++|+..|...|+++|.+.-.. .|++...+.+.+.. + + ..+
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~----------------~~~~~~~~~~~~~g--~---~-~~s- 80 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDP----------------AASGALRARAAELG--V---E-PLD- 80 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCT----------------TTHHHHHHHHHHTT--C---E-EES-
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccc----------------cchHHHHHHHHHCC--C---C-CCC-
Confidence 46899999999999999999999955899998643110 13444444444432 2 1 101
Q ss_pred ChhhhcCCceEEEcCCCHHHHHHHHHH
Q 002073 258 TKEQLSDFQAVVFTDISLDKAIEFDDF 284 (972)
Q Consensus 258 ~~e~l~~fdvVV~~~~~~~~~~~ln~~ 284 (972)
..+.+.+.|+||.|..+......+.++
T Consensus 81 ~~e~~~~aDvVi~avp~~~~~~~~~~i 107 (317)
T 4ezb_A 81 DVAGIACADVVLSLVVGAATKAVAASA 107 (317)
T ss_dssp SGGGGGGCSEEEECCCGGGHHHHHHHH
T ss_pred HHHHHhcCCEEEEecCCHHHHHHHHHH
Confidence 234567788888887654444444333
No 93
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=92.76 E-value=0.17 Score=54.79 Aligned_cols=106 Identities=14% Similarity=0.096 Sum_probs=66.1
Q ss_pred HhhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHh--cCCCEEEE
Q 002073 175 RLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQEL--NNAVVLST 252 (972)
Q Consensus 175 kL~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eL--Np~V~V~~ 252 (972)
.+.+++|+|+|+||.|..++..|...|+++|++++.+.-....+... +.... .+.+.+. ..++-|++
T Consensus 114 ~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~-------~~~~~----~~~~~~~~~~aDiVIna 182 (277)
T 3don_A 114 GIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLN-------INKIN----LSHAESHLDEFDIIINT 182 (277)
T ss_dssp TGGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSC-------CEEEC----HHHHHHTGGGCSEEEEC
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHh-------ccccc----HhhHHHHhcCCCEEEEC
Confidence 37789999999999999999999999999999998776444444432 11100 1123332 23444443
Q ss_pred eec--------CCChhhhcCCceEEEcCCCHHHHHHHHHHHHhcCCCcee
Q 002073 253 LTS--------KLTKEQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISF 294 (972)
Q Consensus 253 ~~~--------~l~~e~l~~fdvVV~~~~~~~~~~~ln~~c~~~~~~Ipf 294 (972)
... .+..+.++.-.+|++...++. ...+-+.+++.| +..
T Consensus 183 Tp~Gm~~~~~~~l~~~~l~~~~~V~D~vY~P~-~T~ll~~A~~~G--~~~ 229 (277)
T 3don_A 183 TPAGMNGNTDSVISLNRLASHTLVSDIVYNPY-KTPILIEAEQRG--NPI 229 (277)
T ss_dssp CC-------CCSSCCTTCCSSCEEEESCCSSS-SCHHHHHHHHTT--CCE
T ss_pred ccCCCCCCCcCCCCHHHcCCCCEEEEecCCCC-CCHHHHHHHHCc--CEE
Confidence 321 123345566667787765422 134677788888 543
No 94
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=92.71 E-value=0.56 Score=51.35 Aligned_cols=33 Identities=27% Similarity=0.279 Sum_probs=30.3
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCC
Q 002073 179 SNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 211 (972)
Q Consensus 179 s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d 211 (972)
.+|.|+|+|.+|..+|..|+..|...++++|.+
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~ 37 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIA 37 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 589999999999999999999998679999864
No 95
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=92.70 E-value=0.27 Score=54.48 Aligned_cols=75 Identities=16% Similarity=0.217 Sum_probs=55.2
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhcC-CEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcC---CCEEE
Q 002073 176 LFASNILVSGMQGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNN---AVVLS 251 (972)
Q Consensus 176 L~~s~VlIvG~gGlG~EiaKNLvLaGV-g~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp---~V~V~ 251 (972)
....+|.|+|+|.+|+.+|..|+..|+ ++++|+|.+ ..|++..+.-|+...| .+.+.
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~-------------------~~k~~g~a~DL~~~~~~~~~~~i~ 67 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF-------------------KDKTKGDAIDLEDALPFTSPKKIY 67 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC-------------------HHHHHHHHHHHHTTGGGSCCCEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC-------------------hHHHHHHHhhHhhhhhhcCCcEEE
Confidence 345789999999999999999999998 689999852 2356666666665554 34443
Q ss_pred EeecCCChhhhcCCceEEEcCC
Q 002073 252 TLTSKLTKEQLSDFQAVVFTDI 273 (972)
Q Consensus 252 ~~~~~l~~e~l~~fdvVV~~~~ 273 (972)
.+ +.+.+++.|+||.+..
T Consensus 68 --~~--~~~a~~~aDiVvi~ag 85 (326)
T 3vku_A 68 --SA--EYSDAKDADLVVITAG 85 (326)
T ss_dssp --EC--CGGGGTTCSEEEECCC
T ss_pred --EC--cHHHhcCCCEEEECCC
Confidence 33 3456889999998864
No 96
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=92.65 E-value=0.33 Score=51.50 Aligned_cols=96 Identities=20% Similarity=0.227 Sum_probs=61.6
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEeec
Q 002073 176 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTS 255 (972)
Q Consensus 176 L~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~~ 255 (972)
|+..+|||.|+|.+|..+++.|...|. +|+.++...-. + .+.+. .+..
T Consensus 1 M~~~~ilVtGaG~iG~~l~~~L~~~g~-~V~~~~r~~~~---~--------------------------~~~~~--~~~~ 48 (286)
T 3gpi_A 1 MSLSKILIAGCGDLGLELARRLTAQGH-EVTGLRRSAQP---M--------------------------PAGVQ--TLIA 48 (286)
T ss_dssp -CCCCEEEECCSHHHHHHHHHHHHTTC-CEEEEECTTSC---C--------------------------CTTCC--EEEC
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCccc---c--------------------------ccCCc--eEEc
Confidence 345689999999999999999999997 67777653211 1 12222 2223
Q ss_pred CCCh-----hhhcC-CceEEEcCC------------CHHHHHHHHHHHHhcCCCceeEEeeecceeE
Q 002073 256 KLTK-----EQLSD-FQAVVFTDI------------SLDKAIEFDDFCHNHQPAISFIKAEVRGLFG 304 (972)
Q Consensus 256 ~l~~-----e~l~~-fdvVV~~~~------------~~~~~~~ln~~c~~~~~~IpfI~a~~~G~~G 304 (972)
++++ +.+++ +|+||.+.. +......+-+.|++.+. ..||.+++.+.+|
T Consensus 49 Dl~d~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~-~~~v~~SS~~vyg 114 (286)
T 3gpi_A 49 DVTRPDTLASIVHLRPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPL-QHVFFVSSTGVYG 114 (286)
T ss_dssp CTTCGGGCTTGGGGCCSEEEECHHHHHHC-----CCSHHHHHHHHHHTTTSCC-CEEEEEEEGGGCC
T ss_pred cCCChHHHHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCC-CEEEEEcccEEEc
Confidence 3321 23444 788876531 34445677778887761 3688888888766
No 97
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=92.64 E-value=0.57 Score=47.61 Aligned_cols=95 Identities=14% Similarity=0.098 Sum_probs=62.2
Q ss_pred CeEEEEc-CChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEeecCC
Q 002073 179 SNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKL 257 (972)
Q Consensus 179 s~VlIvG-~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~~~l 257 (972)
.+|+|.| .|++|..+++.|...|. +|++++...-....+.. .++.+..++
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~----------------------------~~~~~~~Dl 55 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGF-EVTAVVRHPEKIKIENE----------------------------HLKVKKADV 55 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTC-EEEEECSCGGGCCCCCT----------------------------TEEEECCCT
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCC-EEEEEEcCcccchhccC----------------------------ceEEEEecC
Confidence 5899999 58999999999999994 88888875433322211 233344444
Q ss_pred Ch-----hhhcCCceEEEcCC-----------CHHHHHHHHHHHHhcCCCc-eeEEeeecceeE
Q 002073 258 TK-----EQLSDFQAVVFTDI-----------SLDKAIEFDDFCHNHQPAI-SFIKAEVRGLFG 304 (972)
Q Consensus 258 ~~-----e~l~~fdvVV~~~~-----------~~~~~~~ln~~c~~~~~~I-pfI~a~~~G~~G 304 (972)
++ +.++++|+||.+.. +......+-+.|++.+ + .||..++.+.++
T Consensus 56 ~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~Ss~~~~~ 117 (227)
T 3dhn_A 56 SSLDEVCEVCKGADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAG--VNRFLMVGGAGSLF 117 (227)
T ss_dssp TCHHHHHHHHTTCSEEEECCCC------CCSHHHHHHHHHHHHHHHTT--CSEEEEECCSTTSE
T ss_pred CCHHHHHHHhcCCCEEEEeCcCCCCChhHHHHHHHHHHHHHHHHHHhC--CCEEEEeCChhhcc
Confidence 22 23556777776543 2344556777888887 5 688877766443
No 98
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=92.63 E-value=0.17 Score=53.75 Aligned_cols=83 Identities=16% Similarity=0.310 Sum_probs=57.9
Q ss_pred HhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCcE
Q 002073 573 LEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLN 651 (972)
Q Consensus 573 L~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~~ 651 (972)
|++++++|.|+ ||||.++++.|+..|. +++++|.+ ..+.+.+++.+...+++..
T Consensus 8 l~~k~~lVTGas~gIG~aia~~l~~~G~------~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~ 62 (267)
T 3t4x_A 8 LKGKTALVTGSTAGIGKAIATSLVAEGA------NVLINGRR-------------------EENVNETIKEIRAQYPDAI 62 (267)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEESS-------------------HHHHHHHHHHHHHHCTTCE
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEeCC-------------------HHHHHHHHHHHHhhCCCce
Confidence 56778999995 8899999999999998 78887643 2345556677777777777
Q ss_pred EEEeecccCCCcc--cccchhccCCCcEEEEcc
Q 002073 652 IEALQNRVGPETE--NVFDDTFWENITCVINAL 682 (972)
Q Consensus 652 I~~~~~~v~~~~e--~i~~~~f~~~~DvVi~al 682 (972)
+..+...+..... .++ +-+...|++|++.
T Consensus 63 ~~~~~~D~~~~~~~~~~~--~~~g~id~lv~nA 93 (267)
T 3t4x_A 63 LQPVVADLGTEQGCQDVI--EKYPKVDILINNL 93 (267)
T ss_dssp EEEEECCTTSHHHHHHHH--HHCCCCSEEEECC
T ss_pred EEEEecCCCCHHHHHHHH--HhcCCCCEEEECC
Confidence 7777766653221 111 1235678888764
No 99
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=92.60 E-value=0.32 Score=49.45 Aligned_cols=94 Identities=19% Similarity=0.265 Sum_probs=58.2
Q ss_pred cEEEEc-CCcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCcEEEEe
Q 002073 577 KVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEAL 655 (972)
Q Consensus 577 kVlIVG-aGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~~I~~~ 655 (972)
||+|.| .|+||.++++.|+..|. ++++++.+.-....+ + +++.+
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~------~V~~~~R~~~~~~~~---------------------------~--~~~~~ 46 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDY------QIYAGARKVEQVPQY---------------------------N--NVKAV 46 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSC------EEEEEESSGGGSCCC---------------------------T--TEEEE
T ss_pred eEEEECCCCHHHHHHHHHHHHCCC------EEEEEECCccchhhc---------------------------C--CceEE
Confidence 799999 58999999999999987 888887653111100 2 34445
Q ss_pred ecccCCCcccccchhccCCCcEEEEccC---------ChHHHHHHhhhhhcccc-ceEeccc
Q 002073 656 QNRVGPETENVFDDTFWENITCVINALD---------NVNARLYVDQRCLYFQK-PLLESGT 707 (972)
Q Consensus 656 ~~~v~~~~e~i~~~~f~~~~DvVi~alD---------n~~aR~~v~~~c~~~~k-Pli~sgt 707 (972)
...+....+.+ ...++++|+||++.. |+.+-..+-+.|...+. .+|..++
T Consensus 47 ~~D~~d~~~~~--~~~~~~~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 106 (219)
T 3dqp_A 47 HFDVDWTPEEM--AKQLHGMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLST 106 (219)
T ss_dssp ECCTTSCHHHH--HTTTTTCSEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECC
T ss_pred EecccCCHHHH--HHHHcCCCEEEECCcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECc
Confidence 55554311222 345678999999865 44444556666666553 3444333
No 100
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=92.57 E-value=0.63 Score=50.77 Aligned_cols=109 Identities=21% Similarity=0.264 Sum_probs=68.2
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHh--cCCCEEEEeecC
Q 002073 179 SNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQEL--NNAVVLSTLTSK 256 (972)
Q Consensus 179 s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eL--Np~V~V~~~~~~ 256 (972)
++|.+||+|-.|..+|+||+.+|. .++++|.+.-....+.. .|-..+.. +.++ +.++-+......
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~-~v~v~dr~~~~~~~l~~--------~Ga~~a~s----~~e~~~~~dvv~~~l~~~ 70 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLVQSAVDGLVA--------AGASAARS----ARDAVQGADVVISMLPAS 70 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHH--------TTCEECSS----HHHHHTTCSEEEECCSCH
T ss_pred CEEEEeeehHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHHH--------cCCEEcCC----HHHHHhcCCceeecCCch
Confidence 479999999999999999999997 79999864422222211 11111111 2222 234444443321
Q ss_pred C-Chh----------hhcCCceEEEcC-CCHHHHHHHHHHHHhcCCCceeEEeeecce
Q 002073 257 L-TKE----------QLSDFQAVVFTD-ISLDKAIEFDDFCHNHQPAISFIKAEVRGL 302 (972)
Q Consensus 257 l-~~e----------~l~~fdvVV~~~-~~~~~~~~ln~~c~~~~~~IpfI~a~~~G~ 302 (972)
- .++ .+..=++||++. .+++...++.+.+.+++ +.|+.+-+.|-
T Consensus 71 ~~v~~V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G--~~~lDaPVsGg 126 (300)
T 3obb_A 71 QHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERG--LAMLDAPVSGG 126 (300)
T ss_dssp HHHHHHHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTT--CEEEECCEESC
T ss_pred HHHHHHHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcC--CEEEecCCCCC
Confidence 0 011 122235777655 57888899999999999 99999887763
No 101
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=92.56 E-value=0.34 Score=49.76 Aligned_cols=37 Identities=24% Similarity=0.302 Sum_probs=29.3
Q ss_pred HHhhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCC
Q 002073 174 RRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 211 (972)
Q Consensus 174 ~kL~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d 211 (972)
-++...+|.|+|+|.+|..+|+.|...|. +++++|.+
T Consensus 15 ~~~~~~~I~iiG~G~mG~~la~~l~~~g~-~V~~~~~~ 51 (209)
T 2raf_A 15 LYFQGMEITIFGKGNMGQAIGHNFEIAGH-EVTYYGSK 51 (209)
T ss_dssp -----CEEEEECCSHHHHHHHHHHHHTTC-EEEEECTT
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCC
Confidence 35677899999999999999999999996 78898754
No 102
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=92.54 E-value=0.35 Score=52.68 Aligned_cols=106 Identities=12% Similarity=0.165 Sum_probs=60.9
Q ss_pred hhcCeEEEEcC-ChHHHHHHHHHHHhcCC-EEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEe
Q 002073 176 LFASNILVSGM-QGLGAEIAKNLILAGVK-SVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTL 253 (972)
Q Consensus 176 L~~s~VlIvG~-gGlG~EiaKNLvLaGVg-~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~ 253 (972)
+...+|||.|+ |.+|..+++.|...|-. .++..|....... . +.+.++...-.++.+
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~-~--------------------~~l~~~~~~~~~~~~ 80 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGN-L--------------------NNVKSIQDHPNYYFV 80 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCC-G--------------------GGGTTTTTCTTEEEE
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccc-h--------------------hhhhhhccCCCeEEE
Confidence 45568999997 89999999999999932 5666664321110 0 011112222234444
Q ss_pred ecCCCh-----hhhcC--CceEEEcCCC-----------------HHHHHHHHHHHHhcCCCce-eEEeeecceeE
Q 002073 254 TSKLTK-----EQLSD--FQAVVFTDIS-----------------LDKAIEFDDFCHNHQPAIS-FIKAEVRGLFG 304 (972)
Q Consensus 254 ~~~l~~-----e~l~~--fdvVV~~~~~-----------------~~~~~~ln~~c~~~~~~Ip-fI~a~~~G~~G 304 (972)
..++++ +.+.+ +|+||.+... ......+-+.|++.+ ++ ||.+++.+.+|
T Consensus 81 ~~Dl~d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~~v~~SS~~vy~ 154 (346)
T 4egb_A 81 KGEIQNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYP--HIKLVQVSTDEVYG 154 (346)
T ss_dssp ECCTTCHHHHHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHST--TSEEEEEEEGGGGC
T ss_pred EcCCCCHHHHHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcC--CCEEEEeCchHHhC
Confidence 445432 23333 6777755321 111245667888887 65 88888877765
No 103
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=92.51 E-value=0.34 Score=53.41 Aligned_cols=105 Identities=12% Similarity=0.114 Sum_probs=65.0
Q ss_pred HHHHhhcCeEEEEc-CChHHHHHHHHHHHh-cCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCE
Q 002073 172 TMRRLFASNILVSG-MQGLGAEIAKNLILA-GVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVV 249 (972)
Q Consensus 172 ~q~kL~~s~VlIvG-~gGlG~EiaKNLvLa-GVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~ 249 (972)
++..|+..+|||.| .|.+|..+++.|... |. +|+.+|...-....+. ..-.
T Consensus 18 ~~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~--------------------------~~~~ 70 (372)
T 3slg_A 18 GPGSMKAKKVLILGVNGFIGHHLSKRILETTDW-EVFGMDMQTDRLGDLV--------------------------KHER 70 (372)
T ss_dssp -----CCCEEEEESCSSHHHHHHHHHHHHHSSC-EEEEEESCCTTTGGGG--------------------------GSTT
T ss_pred CCcccCCCEEEEECCCChHHHHHHHHHHhCCCC-EEEEEeCChhhhhhhc--------------------------cCCC
Confidence 56677788999999 699999999999998 75 7888876432111110 0113
Q ss_pred EEEeecCCC-h-----hhhcCCceEEEcCC--CHH-------H--------HHHHHHHHHhcCCCceeEEeeecceeEE
Q 002073 250 LSTLTSKLT-K-----EQLSDFQAVVFTDI--SLD-------K--------AIEFDDFCHNHQPAISFIKAEVRGLFGS 305 (972)
Q Consensus 250 V~~~~~~l~-~-----e~l~~fdvVV~~~~--~~~-------~--------~~~ln~~c~~~~~~IpfI~a~~~G~~G~ 305 (972)
++.+..+++ + +.++++|+||-+.. ... . ...+-+.|++.+ ..||.+++.+.+|.
T Consensus 71 v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~v~~SS~~vyg~ 147 (372)
T 3slg_A 71 MHFFEGDITINKEWVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG--KHLVFPSTSEVYGM 147 (372)
T ss_dssp EEEEECCTTTCHHHHHHHHHHCSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT--CEEEEECCGGGGBS
T ss_pred eEEEeCccCCCHHHHHHHhccCCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC--CcEEEeCcHHHhCC
Confidence 455555554 2 24557788886432 111 1 134667888888 78999988877664
No 104
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=92.48 E-value=0.21 Score=53.85 Aligned_cols=36 Identities=11% Similarity=0.392 Sum_probs=30.2
Q ss_pred cCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 575 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 575 ~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
..||.|||+|.+|+.+++.|+..|. +..+++++|.+
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~---~~~~V~v~dr~ 38 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGY---DPNRICVTNRS 38 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTC---CGGGEEEECSS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCC---CCCeEEEEeCC
Confidence 5789999999999999999999986 22578888754
No 105
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=92.43 E-value=0.27 Score=52.15 Aligned_cols=33 Identities=27% Similarity=0.439 Sum_probs=29.0
Q ss_pred cCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 575 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 575 ~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
.++|+|.|+|.||..+++.|+..|. ++++++.+
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~------~V~~~~r~ 35 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGH------EVTGLRRS 35 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC------CEEEEECT
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 4689999999999999999999997 78887653
No 106
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=92.43 E-value=0.4 Score=51.51 Aligned_cols=33 Identities=33% Similarity=0.388 Sum_probs=29.9
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCC
Q 002073 178 ASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 211 (972)
Q Consensus 178 ~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d 211 (972)
-.+|.|||+|.+|..+|..|+.+|. .|+++|.+
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~-~V~l~d~~ 36 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGF-AVTAYDIN 36 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-eEEEEeCC
Confidence 3689999999999999999999998 89999864
No 107
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=92.40 E-value=0.46 Score=51.84 Aligned_cols=72 Identities=15% Similarity=0.089 Sum_probs=50.8
Q ss_pred eEEEEcCChHHHHHHHHHHHhcC-CEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhc----CCCEEEEee
Q 002073 180 NILVSGMQGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELN----NAVVLSTLT 254 (972)
Q Consensus 180 ~VlIvG~gGlG~EiaKNLvLaGV-g~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLN----p~V~V~~~~ 254 (972)
+|.|+|+|.+|..+|..|+..|. ++++|+|.+. .+++.....|+..+ ..++|....
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~-------------------~~~~g~~~dl~~~~~~~~~~~~i~~t~ 62 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE-------------------DLAVGEAMDLAHAAAGIDKYPKIVGGA 62 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH-------------------HHHHHHHHHHHHHHHTTTCCCEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh-------------------HHHHHHHHHHHhhhhhcCCCCEEEEeC
Confidence 79999999999999999999996 4899998532 23433333344444 345665533
Q ss_pred cCCChhhhcCCceEEEcCC
Q 002073 255 SKLTKEQLSDFQAVVFTDI 273 (972)
Q Consensus 255 ~~l~~e~l~~fdvVV~~~~ 273 (972)
+ .+.+++.|+||.+..
T Consensus 63 d---~~a~~~aDiVViaag 78 (294)
T 1oju_A 63 D---YSLLKGSEIIVVTAG 78 (294)
T ss_dssp C---GGGGTTCSEEEECCC
T ss_pred C---HHHhCCCCEEEECCC
Confidence 2 567889999998753
No 108
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=92.37 E-value=0.83 Score=49.13 Aligned_cols=69 Identities=14% Similarity=0.196 Sum_probs=53.5
Q ss_pred HHHHHhhcCeEEEEc-CChHHHHHHHHHHHhcCC--EEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCC
Q 002073 171 ETMRRLFASNILVSG-MQGLGAEIAKNLILAGVK--SVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNA 247 (972)
Q Consensus 171 e~q~kL~~s~VlIvG-~gGlG~EiaKNLvLaGVg--~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~ 247 (972)
..+..|.+++|+|.| .||+|.++|+.|+..|.+ +|.+.|.+ ..+.+.+.+.+.+.++.
T Consensus 26 ~~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~-------------------~~~~~~~~~~l~~~~~~ 86 (287)
T 3rku_A 26 KAAERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARR-------------------LEKLEELKKTIDQEFPN 86 (287)
T ss_dssp HHHHHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESC-------------------HHHHHHHHHHHHHHCTT
T ss_pred cchhhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECC-------------------HHHHHHHHHHHHhhCCC
Confidence 346678999999998 579999999999999985 78887642 23566677778887777
Q ss_pred CEEEEeecCCC
Q 002073 248 VVLSTLTSKLT 258 (972)
Q Consensus 248 V~V~~~~~~l~ 258 (972)
.++..+..+++
T Consensus 87 ~~~~~~~~Dv~ 97 (287)
T 3rku_A 87 AKVHVAQLDIT 97 (287)
T ss_dssp CEEEEEECCTT
T ss_pred CeEEEEECCCC
Confidence 78877776664
No 109
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=92.30 E-value=0.73 Score=50.15 Aligned_cols=105 Identities=12% Similarity=0.164 Sum_probs=65.7
Q ss_pred HhhcCeEEEEcC-ChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEe
Q 002073 175 RLFASNILVSGM-QGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTL 253 (972)
Q Consensus 175 kL~~s~VlIvG~-gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~ 253 (972)
.+...+|||.|+ |.+|..+++.|...|. +|+++|...-... . . +.++.....++..
T Consensus 24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~---~-------~------------~~~~~~~~~~~~~ 80 (343)
T 2b69_A 24 EKDRKRILITGGAGFVGSHLTDKLMMDGH-EVTVVDNFFTGRK---R-------N------------VEHWIGHENFELI 80 (343)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCG---G-------G------------TGGGTTCTTEEEE
T ss_pred ccCCCEEEEEcCccHHHHHHHHHHHHCCC-EEEEEeCCCccch---h-------h------------hhhhccCCceEEE
Confidence 345678999997 8999999999999995 7888775321100 0 0 0011111235555
Q ss_pred ecCCChhhhcCCceEEEcCC--C-------HHH--------HHHHHHHHHhcCCCceeEEeeecceeE
Q 002073 254 TSKLTKEQLSDFQAVVFTDI--S-------LDK--------AIEFDDFCHNHQPAISFIKAEVRGLFG 304 (972)
Q Consensus 254 ~~~l~~e~l~~fdvVV~~~~--~-------~~~--------~~~ln~~c~~~~~~IpfI~a~~~G~~G 304 (972)
..++.+..+.++|+||.+.. . ... ...+-+.|++.+ +.||..++.+.+|
T Consensus 81 ~~D~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~--~~~v~~SS~~v~g 146 (343)
T 2b69_A 81 NHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG--ARLLLASTSEVYG 146 (343)
T ss_dssp ECCTTSCCCCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHT--CEEEEEEEGGGGB
T ss_pred eCccCChhhcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC--CcEEEECcHHHhC
Confidence 66666556778999997643 1 111 234556788888 7888888877655
No 110
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=92.28 E-value=0.34 Score=53.65 Aligned_cols=75 Identities=21% Similarity=0.224 Sum_probs=53.5
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcC-CEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCC--EEEEee
Q 002073 178 ASNILVSGMQGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAV--VLSTLT 254 (972)
Q Consensus 178 ~s~VlIvG~gGlG~EiaKNLvLaGV-g~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V--~V~~~~ 254 (972)
..+|.|+|+|.+|+.+|..|+..|+ ++++++|.+ ..|++..+.-|+...|.. .++...
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~-------------------~~k~~g~a~DL~~~~~~~~~~v~i~~ 65 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVN-------------------KEKAMGDVMDLNHGKAFAPQPVKTSY 65 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC-------------------HHHHHHHHHHHHHTGGGSSSCCEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc-------------------hHHHHHHHHHHHhccccccCCeEEEe
Confidence 4589999999999999999999997 689999842 235666555566554432 233333
Q ss_pred cCCChhhhcCCceEEEcCC
Q 002073 255 SKLTKEQLSDFQAVVFTDI 273 (972)
Q Consensus 255 ~~l~~e~l~~fdvVV~~~~ 273 (972)
+ +.+.+++.|+||.|..
T Consensus 66 ~--~~~a~~~aDvVvi~ag 82 (326)
T 3pqe_A 66 G--TYEDCKDADIVCICAG 82 (326)
T ss_dssp E--CGGGGTTCSEEEECCS
T ss_pred C--cHHHhCCCCEEEEecc
Confidence 3 2356889999998753
No 111
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=92.26 E-value=0.37 Score=55.09 Aligned_cols=90 Identities=12% Similarity=0.298 Sum_probs=63.6
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEeecCC
Q 002073 178 ASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKL 257 (972)
Q Consensus 178 ~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~~~l 257 (972)
+.+|+|+|+|-+|..+++.|...|+ .++++|.+.- ++ +.+++.. + .++.++.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~-~vvvId~d~~-------------------~v----~~~~~~g--~--~vi~GDa 55 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGV-KMVVLDHDPD-------------------HI----ETLRKFG--M--KVFYGDA 55 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEECCHH-------------------HH----HHHHHTT--C--CCEESCT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-CEEEEECCHH-------------------HH----HHHHhCC--C--eEEEcCC
Confidence 3579999999999999999999997 6899986532 21 2223221 2 2233333
Q ss_pred C-hh-----hhcCCceEEEcCCCHHHHHHHHHHHHhcCCCceeE
Q 002073 258 T-KE-----QLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFI 295 (972)
Q Consensus 258 ~-~e-----~l~~fdvVV~~~~~~~~~~~ln~~c~~~~~~IpfI 295 (972)
+ ++ -+.++++||++..+.+....+-..+++.++.+++|
T Consensus 56 t~~~~L~~agi~~A~~viv~~~~~~~n~~i~~~ar~~~p~~~Ii 99 (413)
T 3l9w_A 56 TRMDLLESAGAAKAEVLINAIDDPQTNLQLTEMVKEHFPHLQII 99 (413)
T ss_dssp TCHHHHHHTTTTTCSEEEECCSSHHHHHHHHHHHHHHCTTCEEE
T ss_pred CCHHHHHhcCCCccCEEEECCCChHHHHHHHHHHHHhCCCCeEE
Confidence 2 22 25678999999999888889999999998544433
No 112
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=92.23 E-value=0.22 Score=53.61 Aligned_cols=67 Identities=9% Similarity=0.114 Sum_probs=48.4
Q ss_pred hcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEeecC
Q 002073 177 FASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSK 256 (972)
Q Consensus 177 ~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~~~ 256 (972)
.+++|+|+|+||.|..++..|...|+++|+|++.+ ..||+..++.+. ..+ ...
T Consensus 118 ~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt-------------------~~ka~~la~~~~-----~~~---~~~ 170 (271)
T 1npy_A 118 KNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARN-------------------VKTGQYLAALYG-----YAY---INS 170 (271)
T ss_dssp TTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSC-------------------HHHHHHHHHHHT-----CEE---ESC
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCC-------------------HHHHHHHHHHcC-----Ccc---chh
Confidence 35789999999999999999999999999998643 136666655542 111 111
Q ss_pred CChhhhcCCceEEEcCC
Q 002073 257 LTKEQLSDFQAVVFTDI 273 (972)
Q Consensus 257 l~~e~l~~fdvVV~~~~ 273 (972)
+. +.++|+||.|+.
T Consensus 171 ~~---~~~~DivInaTp 184 (271)
T 1npy_A 171 LE---NQQADILVNVTS 184 (271)
T ss_dssp CT---TCCCSEEEECSS
T ss_pred hh---cccCCEEEECCC
Confidence 21 457899998864
No 113
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=92.23 E-value=0.23 Score=55.08 Aligned_cols=77 Identities=14% Similarity=0.198 Sum_probs=54.6
Q ss_pred HHhhcCeEEEEcCChHHHHHHHHHHHhcC-CEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCC---CE
Q 002073 174 RRLFASNILVSGMQGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNA---VV 249 (972)
Q Consensus 174 ~kL~~s~VlIvG~gGlG~EiaKNLvLaGV-g~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~---V~ 249 (972)
......+|.|+|+|.+|+.+|..|++.|. ..++|+|-+ ..|++..+.-|+...++ ..
T Consensus 15 ~~~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~-------------------~~~~~g~a~DL~~~~~~~~~~~ 75 (331)
T 4aj2_A 15 EQVPQNKITVVGVGAVGMACAISILMKDLADELALVDVI-------------------EDKLKGEMMDLQHGSLFLKTPK 75 (331)
T ss_dssp --CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC-------------------HHHHHHHHHHHHHTGGGCSCCE
T ss_pred ccCCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC-------------------hHHHHHHHHhhhhhhhccCCCe
Confidence 45567899999999999999999999997 589999842 24677766667765432 23
Q ss_pred EEEeecCCChhhhcCCceEEEcC
Q 002073 250 LSTLTSKLTKEQLSDFQAVVFTD 272 (972)
Q Consensus 250 V~~~~~~l~~e~l~~fdvVV~~~ 272 (972)
+.. .. +.+.+++.|+||.|.
T Consensus 76 i~~-~~--d~~~~~~aDiVvi~a 95 (331)
T 4aj2_A 76 IVS-SK--DYSVTANSKLVIITA 95 (331)
T ss_dssp EEE-CS--SGGGGTTEEEEEECC
T ss_pred EEE-cC--CHHHhCCCCEEEEcc
Confidence 322 22 234588999999874
No 114
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=92.21 E-value=0.28 Score=49.98 Aligned_cols=97 Identities=16% Similarity=0.224 Sum_probs=59.3
Q ss_pred CcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCcEEEE
Q 002073 576 AKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEA 654 (972)
Q Consensus 576 ~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~~I~~ 654 (972)
++|+|.|+ |.||..+++.|+..|. ++++++.+.-....+. + +++.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~------~V~~~~r~~~~~~~~~--------------------------~--~~~~ 50 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGF------EVTAVVRHPEKIKIEN--------------------------E--HLKV 50 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTC------EEEEECSCGGGCCCCC--------------------------T--TEEE
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCC------EEEEEEcCcccchhcc--------------------------C--ceEE
Confidence 58999995 8999999999999997 8888886542222111 1 2334
Q ss_pred eecccCCCcccccchhccCCCcEEEEccC-----------ChHHHHHHhhhhhcccc-ceEecccCC
Q 002073 655 LQNRVGPETENVFDDTFWENITCVINALD-----------NVNARLYVDQRCLYFQK-PLLESGTLG 709 (972)
Q Consensus 655 ~~~~v~~~~e~i~~~~f~~~~DvVi~alD-----------n~~aR~~v~~~c~~~~k-Pli~sgt~G 709 (972)
+...+... +.+ ...++++|+||++.. |+..-..+-+.|...+. .++..++.+
T Consensus 51 ~~~Dl~d~-~~~--~~~~~~~d~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~ 114 (227)
T 3dhn_A 51 KKADVSSL-DEV--CEVCKGADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAG 114 (227)
T ss_dssp ECCCTTCH-HHH--HHHHTTCSEEEECCCC------CCSHHHHHHHHHHHHHHHTTCSEEEEECCST
T ss_pred EEecCCCH-HHH--HHHhcCCCEEEEeCcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChh
Confidence 44444321 111 234567788887754 33444455666666654 466555554
No 115
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=92.08 E-value=0.21 Score=52.62 Aligned_cols=35 Identities=23% Similarity=0.450 Sum_probs=30.7
Q ss_pred HhcCcEEEEcC-C-cchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 573 LEDAKVFIVGS-G-ALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 573 L~~~kVlIVGa-G-giG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
+++++++|.|+ | |||.++++.|+..|. +++++|.+
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~G~------~V~~~~r~ 56 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLEGA------DVVISDYH 56 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHCCC------EEEEecCC
Confidence 56789999998 7 899999999999998 78888754
No 116
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=92.02 E-value=0.34 Score=52.14 Aligned_cols=81 Identities=15% Similarity=0.147 Sum_probs=52.0
Q ss_pred hcCeEEEEcCChHHHHHHHHHHHhcC--CEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEee
Q 002073 177 FASNILVSGMQGLGAEIAKNLILAGV--KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLT 254 (972)
Q Consensus 177 ~~s~VlIvG~gGlG~EiaKNLvLaGV--g~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~ 254 (972)
...+|.|||+|.+|..++++|...|. ..|+++|.+. .+++...+. . .+.+..
T Consensus 2 ~~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~-------------------~~~~~l~~~---~----gi~~~~ 55 (280)
T 3tri_A 2 NTSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL-------------------DKLDFFKEK---C----GVHTTQ 55 (280)
T ss_dssp CCSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS-------------------HHHHHHHHT---T----CCEEES
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH-------------------HHHHHHHHH---c----CCEEeC
Confidence 45689999999999999999999996 2688887532 122222221 1 122221
Q ss_pred cCCChhhhcCCceEEEcCCCHHHHHHHHHHH
Q 002073 255 SKLTKEQLSDFQAVVFTDISLDKAIEFDDFC 285 (972)
Q Consensus 255 ~~l~~e~l~~fdvVV~~~~~~~~~~~ln~~c 285 (972)
+ ..+.+.+.|+||+|..+......+.++.
T Consensus 56 ~--~~~~~~~aDvVilav~p~~~~~vl~~l~ 84 (280)
T 3tri_A 56 D--NRQGALNADVVVLAVKPHQIKMVCEELK 84 (280)
T ss_dssp C--HHHHHSSCSEEEECSCGGGHHHHHHHHH
T ss_pred C--hHHHHhcCCeEEEEeCHHHHHHHHHHHH
Confidence 1 2356788999999986544444444443
No 117
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=92.00 E-value=0.12 Score=57.33 Aligned_cols=38 Identities=18% Similarity=0.350 Sum_probs=33.7
Q ss_pred HHHhcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCc
Q 002073 571 KKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDV 614 (972)
Q Consensus 571 ~kL~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~ 614 (972)
..|.+++|.|||.|.||..+++.|...|+ +++..|...
T Consensus 136 ~~l~g~tvGIIGlG~IG~~vA~~l~~~G~------~V~~~dr~~ 173 (324)
T 3hg7_A 136 QGLKGRTLLILGTGSIGQHIAHTGKHFGM------KVLGVSRSG 173 (324)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHHHTTC------EEEEECSSC
T ss_pred cccccceEEEEEECHHHHHHHHHHHhCCC------EEEEEcCCh
Confidence 36788999999999999999999999998 888888654
No 118
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=91.98 E-value=0.75 Score=50.82 Aligned_cols=74 Identities=16% Similarity=0.153 Sum_probs=50.5
Q ss_pred hcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHH----HHHHHhcCCCEEEE
Q 002073 177 FASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASV----QKLQELNNAVVLST 252 (972)
Q Consensus 177 ~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~----~~L~eLNp~V~V~~ 252 (972)
...+|.|+|+|.+|..+|..|+..|...++|+|.+. .+++... +.+..+....+++.
T Consensus 13 ~~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~-------------------~~l~~~~~~l~~~~~~~~~~~~i~~ 73 (328)
T 2hjr_A 13 MRKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE-------------------GVPQGKALDLNHCMALIGSPAKIFG 73 (328)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST-------------------THHHHHHHHHHHHHHHHTCCCCEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH-------------------HHHHHHHHHHHhHhhccCCCCEEEE
Confidence 346899999999999999999999995699998642 1222212 22223333455665
Q ss_pred eecCCChhhhcCCceEEEcC
Q 002073 253 LTSKLTKEQLSDFQAVVFTD 272 (972)
Q Consensus 253 ~~~~l~~e~l~~fdvVV~~~ 272 (972)
.++ + +.+++.|+||.+.
T Consensus 74 t~d-~--~al~~aD~VI~av 90 (328)
T 2hjr_A 74 ENN-Y--EYLQNSDVVIITA 90 (328)
T ss_dssp ESC-G--GGGTTCSEEEECC
T ss_pred CCC-H--HHHCCCCEEEEcC
Confidence 432 3 4678999999985
No 119
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=91.96 E-value=0.39 Score=52.89 Aligned_cols=77 Identities=19% Similarity=0.121 Sum_probs=52.3
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHh----cCCCEEE
Q 002073 176 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQEL----NNAVVLS 251 (972)
Q Consensus 176 L~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eL----Np~V~V~ 251 (972)
++..+|.|+|+|.+|..+|..|+..|++.++|+|.+.. ..+++..+..|... .....|.
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~~-----------------~~~~~g~a~dl~~~~~~~~~~~~i~ 68 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQL-----------------ENPTKGKALDMLEASPVQGFDANII 68 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGGG-----------------HHHHHHHHHHHHHHHHHHTCCCCEE
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccch-----------------HHHHHHhhhhHHHhhhhccCCCEEE
Confidence 45679999999999999999999999989999996420 11222222333322 2344555
Q ss_pred EeecCCChhhhcCCceEEEcC
Q 002073 252 TLTSKLTKEQLSDFQAVVFTD 272 (972)
Q Consensus 252 ~~~~~l~~e~l~~fdvVV~~~ 272 (972)
... +.+.+++.|+||.+.
T Consensus 69 ~t~---d~~a~~~aDvVIiaa 86 (315)
T 3tl2_A 69 GTS---DYADTADSDVVVITA 86 (315)
T ss_dssp EES---CGGGGTTCSEEEECC
T ss_pred EcC---CHHHhCCCCEEEEeC
Confidence 432 245688999999985
No 120
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=91.90 E-value=0.65 Score=50.10 Aligned_cols=80 Identities=15% Similarity=0.144 Sum_probs=49.9
Q ss_pred hcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCcEE
Q 002073 574 EDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNI 652 (972)
Q Consensus 574 ~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~~I 652 (972)
.+++|+|.|+ |.||+.+++.|+..|. +++++|.+. .+...+.+.+....+ -++
T Consensus 10 ~~~~vlVTGatG~iG~~l~~~L~~~g~------~V~~~~r~~-------------------~~~~~~~~~~~~~~~-~~~ 63 (342)
T 1y1p_A 10 EGSLVLVTGANGFVASHVVEQLLEHGY------KVRGTARSA-------------------SKLANLQKRWDAKYP-GRF 63 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESSH-------------------HHHHHHHHHHHHHST-TTE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCC------EEEEEeCCc-------------------ccHHHHHHHhhccCC-Cce
Confidence 4678999997 9999999999999987 787776432 122333333333222 234
Q ss_pred EEe-ecccCCCcccccchhccCCCcEEEEcc
Q 002073 653 EAL-QNRVGPETENVFDDTFWENITCVINAL 682 (972)
Q Consensus 653 ~~~-~~~v~~~~e~i~~~~f~~~~DvVi~al 682 (972)
+.+ ...+... +.+ ...++++|+||++.
T Consensus 64 ~~~~~~D~~d~-~~~--~~~~~~~d~vih~A 91 (342)
T 1y1p_A 64 ETAVVEDMLKQ-GAY--DEVIKGAAGVAHIA 91 (342)
T ss_dssp EEEECSCTTST-TTT--TTTTTTCSEEEECC
T ss_pred EEEEecCCcCh-HHH--HHHHcCCCEEEEeC
Confidence 444 4444422 111 24566899999975
No 121
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=91.89 E-value=0.11 Score=57.49 Aligned_cols=37 Identities=22% Similarity=0.297 Sum_probs=29.6
Q ss_pred HHHhcCcEEEEcC-CcchHHHHHHHHHc-cccCCCCceEEEEcCC
Q 002073 571 KKLEDAKVFIVGS-GALGCEFLKNVALM-GVSCGNQGKLTITDDD 613 (972)
Q Consensus 571 ~kL~~~kVlIVGa-GgiG~e~lknLa~~-Gv~~~~~g~i~iiD~D 613 (972)
..++.++|+|.|+ |.||+.+++.|+.. |. +++++|..
T Consensus 20 ~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~------~V~~~~r~ 58 (372)
T 3slg_A 20 GSMKAKKVLILGVNGFIGHHLSKRILETTDW------EVFGMDMQ 58 (372)
T ss_dssp ---CCCEEEEESCSSHHHHHHHHHHHHHSSC------EEEEEESC
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHhCCCC------EEEEEeCC
Confidence 4566789999995 99999999999998 76 88888754
No 122
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=91.86 E-value=0.16 Score=55.26 Aligned_cols=36 Identities=11% Similarity=0.200 Sum_probs=32.5
Q ss_pred HhcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 573 LEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 573 L~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
+.+++++|+|+||.|..++..|+..|+ ++|+|++.+
T Consensus 120 ~~~k~vlvlGaGGaaraia~~L~~~G~-----~~v~v~nRt 155 (282)
T 3fbt_A 120 IKNNICVVLGSGGAARAVLQYLKDNFA-----KDIYVVTRN 155 (282)
T ss_dssp CTTSEEEEECSSTTHHHHHHHHHHTTC-----SEEEEEESC
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCC-----CEEEEEeCC
Confidence 567899999999999999999999999 899998643
No 123
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=91.83 E-value=0.18 Score=51.17 Aligned_cols=30 Identities=17% Similarity=0.327 Sum_probs=26.7
Q ss_pred cEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcC
Q 002073 577 KVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDD 612 (972)
Q Consensus 577 kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~ 612 (972)
||+|.|+ |+||.++++.|+..|. ++++++.
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~------~V~~~~R 32 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGH------EVLAVVR 32 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCC------EEEEEEe
Confidence 6999997 9999999999999997 7888764
No 124
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=91.81 E-value=0.37 Score=52.51 Aligned_cols=40 Identities=23% Similarity=0.189 Sum_probs=27.7
Q ss_pred HHHHhhcCeEEEEcC-ChHHHHHHHHHHHhcCCEEEEEeCCc
Q 002073 172 TMRRLFASNILVSGM-QGLGAEIAKNLILAGVKSVTLHDEGT 212 (972)
Q Consensus 172 ~q~kL~~s~VlIvG~-gGlG~EiaKNLvLaGVg~itLvD~d~ 212 (972)
.++.+...+|||.|. |.+|..+++.|...|. +|+++|...
T Consensus 13 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~ 53 (347)
T 4id9_A 13 GLVPRGSHMILVTGSAGRVGRAVVAALRTQGR-TVRGFDLRP 53 (347)
T ss_dssp --------CEEEETTTSHHHHHHHHHHHHTTC-CEEEEESSC
T ss_pred cccccCCCEEEEECCCChHHHHHHHHHHhCCC-EEEEEeCCC
Confidence 356777889999997 8999999999999996 677777543
No 125
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=91.73 E-value=0.34 Score=51.49 Aligned_cols=86 Identities=15% Similarity=0.251 Sum_probs=53.1
Q ss_pred HHhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCc
Q 002073 572 KLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRL 650 (972)
Q Consensus 572 kL~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~ 650 (972)
.+.+++++|.|+ |+||.++++.|+..|. +++++|.+. .+.+.+++.+.......
T Consensus 29 ~l~~k~vlVTGasggIG~~la~~l~~~G~------~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~ 83 (279)
T 1xg5_A 29 RWRDRLALVTGASGGIGAAVARALVQQGL------KVVGCARTV-------------------GNIEELAAECKSAGYPG 83 (279)
T ss_dssp GGTTCEEEEESTTSHHHHHHHHHHHHTTC------EEEEEESCH-------------------HHHHHHHHHHHHTTCSS
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCC------EEEEEECCh-------------------HHHHHHHHHHHhcCCCc
Confidence 467789999995 8999999999999997 788876432 23344455555544334
Q ss_pred EEEEeecccCCCcc--cccc--hhccCCCcEEEEcc
Q 002073 651 NIEALQNRVGPETE--NVFD--DTFWENITCVINAL 682 (972)
Q Consensus 651 ~I~~~~~~v~~~~e--~i~~--~~f~~~~DvVi~al 682 (972)
++..+...+..... ..+. .+-+..+|+||++.
T Consensus 84 ~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~vi~~A 119 (279)
T 1xg5_A 84 TLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNA 119 (279)
T ss_dssp EEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECC
T ss_pred eEEEEEecCCCHHHHHHHHHHHHHhCCCCCEEEECC
Confidence 56666655543211 1110 01134678887764
No 126
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=91.64 E-value=0.37 Score=51.98 Aligned_cols=32 Identities=22% Similarity=0.360 Sum_probs=28.9
Q ss_pred CcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 576 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 576 ~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
.||.|||+|.+|+.++++|+..|. +++++|.+
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~------~V~~~d~~ 35 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGY------LLNVFDLV 35 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC------EEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHhCCC------eEEEEcCC
Confidence 589999999999999999999997 78888754
No 127
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=91.61 E-value=0.28 Score=53.49 Aligned_cols=36 Identities=8% Similarity=0.326 Sum_probs=32.6
Q ss_pred HhcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 573 LEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 573 L~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
+..++++|+|+|++|..++..|+..|+ .+|+|+|.+
T Consensus 139 l~~~~vlVlGaGg~g~aia~~L~~~G~-----~~V~v~nR~ 174 (297)
T 2egg_A 139 LDGKRILVIGAGGGARGIYFSLLSTAA-----ERIDMANRT 174 (297)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTC-----SEEEEECSS
T ss_pred CCCCEEEEECcHHHHHHHHHHHHHCCC-----CEEEEEeCC
Confidence 567899999999999999999999998 799998654
No 128
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=91.60 E-value=0.21 Score=57.99 Aligned_cols=99 Identities=14% Similarity=0.164 Sum_probs=57.7
Q ss_pred HHhcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCcE
Q 002073 572 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLN 651 (972)
Q Consensus 572 kL~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~~ 651 (972)
.+..++|+|+|+|++|..++..|+..|- -+|+++|.+. .|++.+++. +.+.
T Consensus 20 ~l~~k~VlIiGAGgiG~aia~~L~~~~g-----~~V~v~~R~~-------------------~ka~~la~~-----~~~~ 70 (467)
T 2axq_A 20 RHMGKNVLLLGSGFVAQPVIDTLAANDD-----INVTVACRTL-------------------ANAQALAKP-----SGSK 70 (467)
T ss_dssp ---CEEEEEECCSTTHHHHHHHHHTSTT-----EEEEEEESSH-------------------HHHHHHHGG-----GTCE
T ss_pred CCCCCEEEEECChHHHHHHHHHHHhCCC-----CeEEEEECCH-------------------HHHHHHHHh-----cCCc
Confidence 4556799999999999999999999842 3788886432 233333321 1222
Q ss_pred EEEeecccCCCcccccchhccCCCcEEEEccCChHHHHHHhhhhhccccceEec
Q 002073 652 IEALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLES 705 (972)
Q Consensus 652 I~~~~~~v~~~~e~i~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~~~kPli~s 705 (972)
+ ....+... +.+ ...++++|+||+|+.... ...+...|...++.+++.
T Consensus 71 ~--~~~D~~d~-~~l--~~~l~~~DvVIn~tp~~~-~~~v~~a~l~~g~~vvd~ 118 (467)
T 2axq_A 71 A--ISLDVTDD-SAL--DKVLADNDVVISLIPYTF-HPNVVKSAIRTKTDVVTS 118 (467)
T ss_dssp E--EECCTTCH-HHH--HHHHHTSSEEEECSCGGG-HHHHHHHHHHHTCEEEEC
T ss_pred E--EEEecCCH-HHH--HHHHcCCCEEEECCchhh-hHHHHHHHHhcCCEEEEe
Confidence 2 22222211 111 234568899999986542 223556676667776654
No 129
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=91.55 E-value=0.24 Score=52.35 Aligned_cols=81 Identities=17% Similarity=0.131 Sum_probs=51.4
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEeec
Q 002073 176 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTS 255 (972)
Q Consensus 176 L~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~~ 255 (972)
+...+|.|+|+|.+|..+++.|...|...++++|.+. .+++...+.+ . +. .. .
T Consensus 8 ~~~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~-------------------~~~~~~~~~~---g--~~--~~-~ 60 (266)
T 3d1l_A 8 IEDTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE-------------------ESARELAQKV---E--AE--YT-T 60 (266)
T ss_dssp GGGCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH-------------------HHHHHHHHHT---T--CE--EE-S
T ss_pred CCCCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH-------------------HHHHHHHHHc---C--Cc--ee-C
Confidence 3446899999999999999999999986688887422 1232222221 1 22 21 1
Q ss_pred CCChhhhcCCceEEEcCCCHHHHHHHHHH
Q 002073 256 KLTKEQLSDFQAVVFTDISLDKAIEFDDF 284 (972)
Q Consensus 256 ~l~~e~l~~fdvVV~~~~~~~~~~~ln~~ 284 (972)
++ ++.+.+.|+||.|..+......+.++
T Consensus 61 ~~-~~~~~~~Dvvi~av~~~~~~~v~~~l 88 (266)
T 3d1l_A 61 DL-AEVNPYAKLYIVSLKDSAFAELLQGI 88 (266)
T ss_dssp CG-GGSCSCCSEEEECCCHHHHHHHHHHH
T ss_pred CH-HHHhcCCCEEEEecCHHHHHHHHHHH
Confidence 11 24567899999998765443344433
No 130
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=91.46 E-value=0.45 Score=51.85 Aligned_cols=38 Identities=18% Similarity=0.245 Sum_probs=32.0
Q ss_pred HHHHhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 570 QKKLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 570 q~kL~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
+..+..++|+|.|+ |.||..+++.|...|. +++++|..
T Consensus 20 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~V~~~~r~ 58 (351)
T 3ruf_A 20 QLIFSPKTWLITGVAGFIGSNLLEKLLKLNQ------VVIGLDNF 58 (351)
T ss_dssp HHHHSCCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEECC
T ss_pred hCCCCCCeEEEECCCcHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 45677899999996 8899999999999997 78887643
No 131
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=91.44 E-value=0.3 Score=51.56 Aligned_cols=86 Identities=20% Similarity=0.253 Sum_probs=53.3
Q ss_pred HHhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCc
Q 002073 572 KLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRL 650 (972)
Q Consensus 572 kL~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~ 650 (972)
.+.+++++|.|+ |+||.++++.|+..|. +++++|.+. .+.+.+++.+.+..+..
T Consensus 10 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~ 64 (267)
T 1iy8_A 10 RFTDRVVLITGGGSGLGRATAVRLAAEGA------KLSLVDVSS-------------------EGLEASKAAVLETAPDA 64 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESCH-------------------HHHHHHHHHHHHHCTTC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEeCCH-------------------HHHHHHHHHHHhhcCCc
Confidence 356788999995 8899999999999997 788876432 23344445555554455
Q ss_pred EEEEeecccCCCcc--cccc--hhccCCCcEEEEcc
Q 002073 651 NIEALQNRVGPETE--NVFD--DTFWENITCVINAL 682 (972)
Q Consensus 651 ~I~~~~~~v~~~~e--~i~~--~~f~~~~DvVi~al 682 (972)
++..+...++.... ..+. .+-+...|+||++.
T Consensus 65 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nA 100 (267)
T 1iy8_A 65 EVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNA 100 (267)
T ss_dssp CEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECC
T ss_pred eEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 66666655553211 1111 01234678777764
No 132
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=91.42 E-value=0.3 Score=56.63 Aligned_cols=95 Identities=7% Similarity=0.186 Sum_probs=69.7
Q ss_pred cCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCcEEEE
Q 002073 575 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEA 654 (972)
Q Consensus 575 ~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~~I~~ 654 (972)
.++|+|+|.|-+|..+|+.|-. + .++.|++.|. .|++.+++.+ |++-|
T Consensus 235 ~~~v~I~GgG~ig~~lA~~L~~-~------~~v~iIE~d~-------------------~r~~~la~~l----~~~~V-- 282 (461)
T 4g65_A 235 YRRIMIVGGGNIGASLAKRLEQ-T------YSVKLIERNL-------------------QRAEKLSEEL----ENTIV-- 282 (461)
T ss_dssp CCEEEEECCSHHHHHHHHHHTT-T------SEEEEEESCH-------------------HHHHHHHHHC----TTSEE--
T ss_pred ccEEEEEcchHHHHHHHHHhhh-c------CceEEEecCH-------------------HHHHHHHHHC----CCceE--
Confidence 5689999999999999999843 3 4788886554 4666666654 44432
Q ss_pred eecccCCCcccccchhccCCCcEEEEccCChHHHHHHhhhhhccccceE
Q 002073 655 LQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLL 703 (972)
Q Consensus 655 ~~~~v~~~~e~i~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~~~kPli 703 (972)
++...+ ..+++.++-.+++|+++.++++-+.-..+.-++.+++.+-+
T Consensus 283 i~GD~t--d~~~L~ee~i~~~D~~ia~T~~De~Ni~~~llAk~~gv~kv 329 (461)
T 4g65_A 283 FCGDAA--DQELLTEENIDQVDVFIALTNEDETNIMSAMLAKRMGAKKV 329 (461)
T ss_dssp EESCTT--CHHHHHHTTGGGCSEEEECCSCHHHHHHHHHHHHHTTCSEE
T ss_pred Eecccc--chhhHhhcCchhhcEEEEcccCcHHHHHHHHHHHHcCCccc
Confidence 333332 23456677788999999999999999999999988777643
No 133
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=91.41 E-value=0.76 Score=50.12 Aligned_cols=72 Identities=15% Similarity=0.123 Sum_probs=51.3
Q ss_pred eEEEEcCChHHHHHHHHHHHhcC-CEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHH----hcCCCEEEEee
Q 002073 180 NILVSGMQGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQE----LNNAVVLSTLT 254 (972)
Q Consensus 180 ~VlIvG~gGlG~EiaKNLvLaGV-g~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~e----LNp~V~V~~~~ 254 (972)
||.|+|+|++|+.+|-.|++.|. +++.|+|- -+.|++.-+--|+. ++...++....
T Consensus 2 KV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di-------------------~~~~~~G~a~DL~h~~~~~~~~~~i~~~~ 62 (294)
T 2x0j_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDI-------------------AEDLAVGEAMDLAHAAAGIDKYPKIVGGA 62 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECS-------------------SHHHHHHHHHHHHHHHGGGTCCCEEEEES
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCCEEEEEeC-------------------CCCcchhhhhhhhcccccCCCCCeEecCC
Confidence 79999999999999999999985 88999983 12345554555555 33344554322
Q ss_pred cCCChhhhcCCceEEEcCC
Q 002073 255 SKLTKEQLSDFQAVVFTDI 273 (972)
Q Consensus 255 ~~l~~e~l~~fdvVV~~~~ 273 (972)
+.+.+++.|+||.+..
T Consensus 63 ---d~~~~~~aDvVvitAG 78 (294)
T 2x0j_A 63 ---DYSLLKGSEIIVVTAG 78 (294)
T ss_dssp ---CGGGGTTCSEEEECCC
T ss_pred ---CHHHhCCCCEEEEecC
Confidence 2356889999998753
No 134
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=91.33 E-value=0.49 Score=47.03 Aligned_cols=34 Identities=26% Similarity=0.353 Sum_probs=29.4
Q ss_pred cCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCCc
Q 002073 575 DAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDV 614 (972)
Q Consensus 575 ~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~ 614 (972)
+++|+|.|+ |+||.++++.|+..|. ++++++.+.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g~------~V~~~~r~~ 37 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAGY------EVTVLVRDS 37 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC------EEEEEESCG
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC------eEEEEEeCh
Confidence 368999998 9999999999999986 888887653
No 135
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=91.33 E-value=0.19 Score=54.81 Aligned_cols=38 Identities=16% Similarity=0.246 Sum_probs=28.0
Q ss_pred HHhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 572 KLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 572 kL~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
.+..++|+|.|+ |.||..+++.|+..|-. -+++.+|..
T Consensus 21 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~----~~v~~~~~~ 59 (346)
T 4egb_A 21 QSNAMNILVTGGAGFIGSNFVHYMLQSYET----YKIINFDAL 59 (346)
T ss_dssp ---CEEEEEETTTSHHHHHHHHHHHHHCTT----EEEEEEECC
T ss_pred ccCCCeEEEECCccHHHHHHHHHHHhhCCC----cEEEEEecc
Confidence 355678999998 89999999999999930 166666643
No 136
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=91.26 E-value=0.34 Score=53.62 Aligned_cols=36 Identities=22% Similarity=0.434 Sum_probs=31.5
Q ss_pred HhcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 573 LEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 573 L~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
++..||.|||+|.+|+.++..|+..|+ ++++++|-+
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~-----~~v~L~Di~ 40 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKEL-----GDVVLFDIA 40 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTC-----CEEEEECSS
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCC-----CeEEEEeCC
Confidence 556799999999999999999999998 589999854
No 137
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=91.17 E-value=0.7 Score=48.74 Aligned_cols=92 Identities=11% Similarity=0.115 Sum_probs=57.1
Q ss_pred HhcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCcEE
Q 002073 573 LEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNI 652 (972)
Q Consensus 573 L~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~~I 652 (972)
+...+|.|||+|.+|+.+++.|+..|. ..++++|.+. .+++.+++.+ .+.+
T Consensus 8 ~~~m~i~iiG~G~mG~~~a~~l~~~g~-----~~v~~~~~~~-------------------~~~~~~~~~~-----g~~~ 58 (266)
T 3d1l_A 8 IEDTPIVLIGAGNLATNLAKALYRKGF-----RIVQVYSRTE-------------------ESARELAQKV-----EAEY 58 (266)
T ss_dssp GGGCCEEEECCSHHHHHHHHHHHHHTC-----CEEEEECSSH-------------------HHHHHHHHHT-----TCEE
T ss_pred CCCCeEEEEcCCHHHHHHHHHHHHCCC-----eEEEEEeCCH-------------------HHHHHHHHHc-----CCce
Confidence 445789999999999999999999997 3477776432 2233233221 1221
Q ss_pred EEeecccCCCcccccchhccCCCcEEEEccCChHHHHHHhhhhhc--cccceEec
Q 002073 653 EALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLY--FQKPLLES 705 (972)
Q Consensus 653 ~~~~~~v~~~~e~i~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~--~~kPli~s 705 (972)
. .+. .+.++++|+||.|+-+...+..+...... .+..+++.
T Consensus 59 --~-----~~~-----~~~~~~~Dvvi~av~~~~~~~v~~~l~~~~~~~~ivv~~ 101 (266)
T 3d1l_A 59 --T-----TDL-----AEVNPYAKLYIVSLKDSAFAELLQGIVEGKREEALMVHT 101 (266)
T ss_dssp --E-----SCG-----GGSCSCCSEEEECCCHHHHHHHHHHHHTTCCTTCEEEEC
T ss_pred --e-----CCH-----HHHhcCCCEEEEecCHHHHHHHHHHHHhhcCCCcEEEEC
Confidence 1 111 23456899999999777666666554322 34455554
No 138
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=91.12 E-value=0.58 Score=51.26 Aligned_cols=109 Identities=8% Similarity=0.008 Sum_probs=64.7
Q ss_pred hcCHHHHHHHhcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHH
Q 002073 564 VFGAKLQKKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAA 643 (972)
Q Consensus 564 l~G~~~q~kL~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l 643 (972)
+|+.+....-...+|.|||+|.+|..++++|+..|. -+++++|.+.-.. .|++...+.+
T Consensus 13 ~~~~~~~~~~M~m~IgvIG~G~mG~~lA~~L~~~G~-----~~V~~~dr~~~~~----------------~~~~~~~~~~ 71 (317)
T 4ezb_A 13 LGTENLYFQSMMTTIAFIGFGEAAQSIAGGLGGRNA-----ARLAAYDLRFNDP----------------AASGALRARA 71 (317)
T ss_dssp --CCCHHHHTSCCEEEEECCSHHHHHHHHHHHTTTC-----SEEEEECGGGGCT----------------TTHHHHHHHH
T ss_pred cCcccCcccccCCeEEEECccHHHHHHHHHHHHcCC-----CeEEEEeCCCccc----------------cchHHHHHHH
Confidence 344444333345789999999999999999999993 2888887653100 1233333333
Q ss_pred HhhCCCcEEEEeecccCCCcccccchhccCCCcEEEEccCChHHHHHHhhhhhc--cccceEecccC
Q 002073 644 TSINPRLNIEALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLY--FQKPLLESGTL 708 (972)
Q Consensus 644 ~~inP~~~I~~~~~~v~~~~e~i~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~--~~kPli~sgt~ 708 (972)
.+. .+ . ..+. .+..++.|+||.|+-.......+...... .+..+++.++.
T Consensus 72 ~~~--g~-~-------~~s~-----~e~~~~aDvVi~avp~~~~~~~~~~i~~~l~~~~ivv~~st~ 123 (317)
T 4ezb_A 72 AEL--GV-E-------PLDD-----VAGIACADVVLSLVVGAATKAVAASAAPHLSDEAVFIDLNSV 123 (317)
T ss_dssp HHT--TC-E-------EESS-----GGGGGGCSEEEECCCGGGHHHHHHHHGGGCCTTCEEEECCSC
T ss_pred HHC--CC-C-------CCCH-----HHHHhcCCEEEEecCCHHHHHHHHHHHhhcCCCCEEEECCCC
Confidence 332 22 0 0001 23456789999999877777666554432 34556665543
No 139
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=91.10 E-value=0.12 Score=56.96 Aligned_cols=37 Identities=24% Similarity=0.333 Sum_probs=32.6
Q ss_pred HHHhcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 571 KKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 571 ~kL~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
..|..++|.|||+|.||..+++.|...|+ +++..|.+
T Consensus 135 ~~l~g~tvGIiG~G~IG~~vA~~l~~~G~------~V~~~dr~ 171 (315)
T 3pp8_A 135 YTREEFSVGIMGAGVLGAKVAESLQAWGF------PLRCWSRS 171 (315)
T ss_dssp CCSTTCCEEEECCSHHHHHHHHHHHTTTC------CEEEEESS
T ss_pred CCcCCCEEEEEeeCHHHHHHHHHHHHCCC------EEEEEcCC
Confidence 35778999999999999999999999988 88888754
No 140
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=91.10 E-value=0.89 Score=47.95 Aligned_cols=97 Identities=10% Similarity=0.003 Sum_probs=58.8
Q ss_pred cCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCcEEEE
Q 002073 575 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEA 654 (972)
Q Consensus 575 ~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~~I~~ 654 (972)
.++|+|.|+|.||+.+++.|...|. +++.++.+. .+...+. . + .++.
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~------~V~~~~r~~-------------------~~~~~~~----~--~--~~~~ 51 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGW------RIIGTSRNP-------------------DQMEAIR----A--S--GAEP 51 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTC------EEEEEESCG-------------------GGHHHHH----H--T--TEEE
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCC------EEEEEEcCh-------------------hhhhhHh----h--C--CCeE
Confidence 4789999999999999999999987 787775432 1211111 1 2 3444
Q ss_pred eecccCCCcccccchhccCCCcEEEEccCCh----HHHHHHhhhhhc--cc-cceEecccCCccc
Q 002073 655 LQNRVGPETENVFDDTFWENITCVINALDNV----NARLYVDQRCLY--FQ-KPLLESGTLGAKC 712 (972)
Q Consensus 655 ~~~~v~~~~e~i~~~~f~~~~DvVi~alDn~----~aR~~v~~~c~~--~~-kPli~sgt~G~~G 712 (972)
+...+.. + + +.++|+||++.... .....+-+.|.. .+ +.+|..++.+.+|
T Consensus 52 ~~~D~~d-----~--~-~~~~d~vi~~a~~~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg 108 (286)
T 3ius_A 52 LLWPGEE-----P--S-LDGVTHLLISTAPDSGGDPVLAALGDQIAARAAQFRWVGYLSTTAVYG 108 (286)
T ss_dssp EESSSSC-----C--C-CTTCCEEEECCCCBTTBCHHHHHHHHHHHHTGGGCSEEEEEEEGGGGC
T ss_pred EEecccc-----c--c-cCCCCEEEECCCccccccHHHHHHHHHHHhhcCCceEEEEeecceecC
Confidence 5444432 1 1 67899999987422 222334445554 33 3466666655554
No 141
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=91.04 E-value=0.59 Score=51.82 Aligned_cols=73 Identities=16% Similarity=0.189 Sum_probs=50.5
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcC-CEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcC---CCEEEEe
Q 002073 178 ASNILVSGMQGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNN---AVVLSTL 253 (972)
Q Consensus 178 ~s~VlIvG~gGlG~EiaKNLvLaGV-g~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp---~V~V~~~ 253 (972)
..+|.|+|+|.+|..+|..|+..|+ +.++|+|-+ ..|++..+.-|+...+ ...+...
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~-------------------~~~~~g~a~DL~~~~~~~~~~~i~~t 81 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMKDLADEVALVDVM-------------------EDKLKGEMMDLEHGSLFLHTAKIVSG 81 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSC-------------------HHHHHHHHHHHHHHGGGSCCSEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECC-------------------HHHHHHHHHHhhhhhhcccCCeEEEc
Confidence 4689999999999999999999997 689999842 1244444444444322 3444432
Q ss_pred ecCCChhhhcCCceEEEcC
Q 002073 254 TSKLTKEQLSDFQAVVFTD 272 (972)
Q Consensus 254 ~~~l~~e~l~~fdvVV~~~ 272 (972)
.+.. .+++.|+||.+.
T Consensus 82 -~d~~--~~~daDiVIita 97 (330)
T 3ldh_A 82 -KDYS--VSAGSKLVVITA 97 (330)
T ss_dssp -SSSC--SCSSCSEEEECC
T ss_pred -CCHH--HhCCCCEEEEeC
Confidence 3333 388999999873
No 142
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=90.96 E-value=0.77 Score=46.61 Aligned_cols=91 Identities=14% Similarity=0.165 Sum_probs=60.1
Q ss_pred eEEEEc-CChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEeecCCC
Q 002073 180 NILVSG-MQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKLT 258 (972)
Q Consensus 180 ~VlIvG-~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~~~l~ 258 (972)
+|+|.| .|++|.++++.|...|. +|++++.+.-....+ + .++.+..+++
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~---------------------------~--~~~~~~~D~~ 51 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDY-QIYAGARKVEQVPQY---------------------------N--NVKAVHFDVD 51 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSC-EEEEEESSGGGSCCC---------------------------T--TEEEEECCTT
T ss_pred eEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCccchhhc---------------------------C--CceEEEeccc
Confidence 699998 79999999999999995 788888654222111 1 2344444443
Q ss_pred h------hhhcCCceEEEcCC---------CHHHHHHHHHHHHhcCCCc-eeEEeeecce
Q 002073 259 K------EQLSDFQAVVFTDI---------SLDKAIEFDDFCHNHQPAI-SFIKAEVRGL 302 (972)
Q Consensus 259 ~------e~l~~fdvVV~~~~---------~~~~~~~ln~~c~~~~~~I-pfI~a~~~G~ 302 (972)
+ +.+.+.|+||.+.. +......+-+.|++.+ + .||..++.+.
T Consensus 52 d~~~~~~~~~~~~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~--~~~iv~~SS~~~ 109 (219)
T 3dqp_A 52 WTPEEMAKQLHGMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAE--VKRFILLSTIFS 109 (219)
T ss_dssp SCHHHHHTTTTTCSEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTT--CCEEEEECCTTT
T ss_pred CCHHHHHHHHcCCCEEEECCcCCCCCcEeEeHHHHHHHHHHHHHhC--CCEEEEECcccc
Confidence 3 24567788887643 3444567778888887 5 5676666443
No 143
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=90.94 E-value=0.4 Score=49.96 Aligned_cols=84 Identities=15% Similarity=0.242 Sum_probs=52.2
Q ss_pred HHhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCc
Q 002073 572 KLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRL 650 (972)
Q Consensus 572 kL~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~ 650 (972)
++.+++++|.|+ |+||.++++.|+..|. +++++|.+. .+.+.+++.+....+
T Consensus 6 ~~~~k~vlITGas~giG~~~a~~l~~~G~------~V~~~~r~~-------------------~~~~~~~~~~~~~~~-- 58 (253)
T 3qiv_A 6 RFENKVGIVTGSGGGIGQAYAEALAREGA------AVVVADINA-------------------EAAEAVAKQIVADGG-- 58 (253)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESCH-------------------HHHHHHHHHHHHTTC--
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCC------EEEEEcCCH-------------------HHHHHHHHHHHhcCC--
Confidence 456789999996 8899999999999998 788886432 344455555555443
Q ss_pred EEEEeecccCCCcc--cccc--hhccCCCcEEEEcc
Q 002073 651 NIEALQNRVGPETE--NVFD--DTFWENITCVINAL 682 (972)
Q Consensus 651 ~I~~~~~~v~~~~e--~i~~--~~f~~~~DvVi~al 682 (972)
++..+...++.... ..++ .+.+...|+||++.
T Consensus 59 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~A 94 (253)
T 3qiv_A 59 TAISVAVDVSDPESAKAMADRTLAEFGGIDYLVNNA 94 (253)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred cEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 45555555543211 1111 01123677777763
No 144
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=90.92 E-value=1.3 Score=47.45 Aligned_cols=94 Identities=20% Similarity=0.204 Sum_probs=59.7
Q ss_pred cCeEEEEc-CChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEeecC
Q 002073 178 ASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSK 256 (972)
Q Consensus 178 ~s~VlIvG-~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~~~ 256 (972)
..+|||.| .|.+|..+++.|...|. +|+.++...-.. .+. .++....+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~-~~~-----------------------------~~~~~~~D 50 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGN-TPIILTRSIGNK-AIN-----------------------------DYEYRVSD 50 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCC-----------------------------------CCEEEECC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCCCCcc-cCC-----------------------------ceEEEEcc
Confidence 36899999 68999999999999997 788887651111 111 12222233
Q ss_pred CCh----hhhcCCceEEEcCC-------------CHHHHHHHHHHHHhcCCCce-eEEeeecceeE
Q 002073 257 LTK----EQLSDFQAVVFTDI-------------SLDKAIEFDDFCHNHQPAIS-FIKAEVRGLFG 304 (972)
Q Consensus 257 l~~----e~l~~fdvVV~~~~-------------~~~~~~~ln~~c~~~~~~Ip-fI~a~~~G~~G 304 (972)
++. +.++++|+||.+.. +......+-+.|++.+ ++ ||..++.+.+|
T Consensus 51 l~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~--~~r~v~~SS~~vyg 114 (311)
T 3m2p_A 51 YTLEDLINQLNDVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENN--ISNIVYASTISAYS 114 (311)
T ss_dssp CCHHHHHHHTTTCSEEEECCCCCCSSSCGGGTHHHHHHHHHHHHHHHHTT--CCEEEEEEEGGGCC
T ss_pred ccHHHHHHhhcCCCEEEEccccCCCCChHHHHHHHHHHHHHHHHHHHHcC--CCEEEEEccHHHhC
Confidence 321 13446666665432 2334457778888888 65 88888877766
No 145
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=90.91 E-value=0.27 Score=51.71 Aligned_cols=64 Identities=11% Similarity=0.142 Sum_probs=45.1
Q ss_pred HHhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCC-
Q 002073 572 KLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPR- 649 (972)
Q Consensus 572 kL~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~- 649 (972)
.+++++++|.|+ ||||.++++.|+..|. +++++|.+ ..+.+.+++.+.+.++.
T Consensus 4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~------~V~~~~r~-------------------~~~~~~~~~~~~~~~~~~ 58 (250)
T 3nyw_A 4 EKQKGLAIITGASQGIGAVIAAGLATDGY------RVVLIARS-------------------KQNLEKVHDEIMRSNKHV 58 (250)
T ss_dssp -CCCCEEEEESTTSHHHHHHHHHHHHHTC------EEEEEESC-------------------HHHHHHHHHHHHHHCTTS
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEECC-------------------HHHHHHHHHHHHHhcccc
Confidence 356788999996 8999999999999998 78888653 23455566666666544
Q ss_pred cEEEEeecccC
Q 002073 650 LNIEALQNRVG 660 (972)
Q Consensus 650 ~~I~~~~~~v~ 660 (972)
.++..+...++
T Consensus 59 ~~~~~~~~Dv~ 69 (250)
T 3nyw_A 59 QEPIVLPLDIT 69 (250)
T ss_dssp CCCEEEECCTT
T ss_pred CcceEEeccCC
Confidence 44555555554
No 146
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=90.91 E-value=1 Score=49.16 Aligned_cols=71 Identities=24% Similarity=0.305 Sum_probs=48.9
Q ss_pred eEEEEcCChHHHHHHHHHHHhcC-CEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhc---CCCEEEEeec
Q 002073 180 NILVSGMQGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELN---NAVVLSTLTS 255 (972)
Q Consensus 180 ~VlIvG~gGlG~EiaKNLvLaGV-g~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLN---p~V~V~~~~~ 255 (972)
+|.|+|+|.+|..+|..|+..|. +.++++|.+. .|++.....+...+ +.+++.. .
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~-------------------~~~~~~~~~l~~~~~~~~~~~i~~--~ 60 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE-------------------DRAQAEAEDIAHAAPVSHGTRVWH--G 60 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH-------------------HHHHHHHHHHTTSCCTTSCCEEEE--E
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH-------------------HHHHHHHHhhhhhhhhcCCeEEEE--C
Confidence 79999999999999999999984 5799998542 13333233333333 3445554 2
Q ss_pred CCChhhhcCCceEEEcCC
Q 002073 256 KLTKEQLSDFQAVVFTDI 273 (972)
Q Consensus 256 ~l~~e~l~~fdvVV~~~~ 273 (972)
+.+.+++.|+||.+..
T Consensus 61 --~~~a~~~aDvVIi~~~ 76 (304)
T 2v6b_A 61 --GHSELADAQVVILTAG 76 (304)
T ss_dssp --CGGGGTTCSEEEECC-
T ss_pred --CHHHhCCCCEEEEcCC
Confidence 2356889999999874
No 147
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=90.90 E-value=0.37 Score=51.18 Aligned_cols=75 Identities=17% Similarity=0.155 Sum_probs=51.5
Q ss_pred cEEEEcC-CcchHHHHHHHHHc-cccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCcEEEE
Q 002073 577 KVFIVGS-GALGCEFLKNVALM-GVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEA 654 (972)
Q Consensus 577 kVlIVGa-GgiG~e~lknLa~~-Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~~I~~ 654 (972)
||.|+|| |.+|..+++.+... |+ --+-++|.+
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~~~~~-----elva~~d~~----------------------------------------- 35 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAAADDL-----TLSAELDAG----------------------------------------- 35 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTC-----EEEEEECTT-----------------------------------------
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCC-----EEEEEEccC-----------------------------------------
Confidence 7999997 99999999998765 66 223355532
Q ss_pred eecccCCCcccccchhcc-CCCcEEEEccCChHHHHHHhhhhhccccceEecccCCc
Q 002073 655 LQNRVGPETENVFDDTFW-ENITCVINALDNVNARLYVDQRCLYFQKPLLESGTLGA 710 (972)
Q Consensus 655 ~~~~v~~~~e~i~~~~f~-~~~DvVi~alDn~~aR~~v~~~c~~~~kPli~sgt~G~ 710 (972)
.+ + +.+. ...|+||+++ ++++-...-..|..+++|++- ||.|+
T Consensus 36 ------~d----l-~~~~~~~~DvvIDfT-~p~a~~~~~~~a~~~g~~~Vi-gTTG~ 79 (245)
T 1p9l_A 36 ------DP----L-SLLTDGNTEVVIDFT-HPDVVMGNLEFLIDNGIHAVV-GTTGF 79 (245)
T ss_dssp ------CC----T-HHHHHTTCCEEEECS-CTTTHHHHHHHHHHTTCEEEE-CCCCC
T ss_pred ------CC----H-HHHhccCCcEEEEcc-ChHHHHHHHHHHHHcCCCEEE-cCCCC
Confidence 00 0 1112 3689999998 555666666789999999884 45453
No 148
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=90.88 E-value=0.25 Score=53.81 Aligned_cols=39 Identities=15% Similarity=0.141 Sum_probs=27.9
Q ss_pred HHHHHhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 569 LQKKLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 569 ~q~kL~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
.+..+..++|+|.|+ |.||..+++.|+..|. +++++|..
T Consensus 13 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~------~V~~~~r~ 52 (347)
T 4id9_A 13 GLVPRGSHMILVTGSAGRVGRAVVAALRTQGR------TVRGFDLR 52 (347)
T ss_dssp --------CEEEETTTSHHHHHHHHHHHHTTC------CEEEEESS
T ss_pred cccccCCCEEEEECCCChHHHHHHHHHHhCCC------EEEEEeCC
Confidence 356778899999997 8999999999999997 78888754
No 149
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=90.87 E-value=1.2 Score=48.65 Aligned_cols=73 Identities=16% Similarity=0.114 Sum_probs=50.4
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHH----hcCCCEEEEee
Q 002073 179 SNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQE----LNNAVVLSTLT 254 (972)
Q Consensus 179 s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~e----LNp~V~V~~~~ 254 (972)
.+|.|+|+|.+|..+|..|+..|.-.++|+|-+. .|++.....|.+ ....++++...
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~-------------------~~~~g~~~dl~~~~~~~~~~~~i~~t~ 63 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE-------------------GVPQGKALDLYEASPIEGFDVRVTGTN 63 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS-------------------SHHHHHHHHHHTTHHHHTCCCCEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc-------------------cHHHHHHHhHHHhHhhcCCCeEEEECC
Confidence 5899999999999999999999974599998532 122222223333 34456666543
Q ss_pred cCCChhhhcCCceEEEcCC
Q 002073 255 SKLTKEQLSDFQAVVFTDI 273 (972)
Q Consensus 255 ~~l~~e~l~~fdvVV~~~~ 273 (972)
+ . +.+++.|+||.+..
T Consensus 64 d-~--~a~~~aD~Vi~a~g 79 (309)
T 1ur5_A 64 N-Y--ADTANSDVIVVTSG 79 (309)
T ss_dssp C-G--GGGTTCSEEEECCC
T ss_pred C-H--HHHCCCCEEEEcCC
Confidence 3 2 45889999999863
No 150
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=90.86 E-value=0.31 Score=52.02 Aligned_cols=86 Identities=20% Similarity=0.240 Sum_probs=52.9
Q ss_pred HHhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCc
Q 002073 572 KLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRL 650 (972)
Q Consensus 572 kL~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~ 650 (972)
.+++++++|.|+ ||||.++++.|+..|. +++++|.+. .|.+.+++.+.+.++ -
T Consensus 9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~------~V~~~~r~~-------------------~~~~~~~~~l~~~~~-~ 62 (311)
T 3o26_A 9 VTKRRCAVVTGGNKGIGFEICKQLSSNGI------MVVLTCRDV-------------------TKGHEAVEKLKNSNH-E 62 (311)
T ss_dssp ---CCEEEESSCSSHHHHHHHHHHHHTTC------EEEEEESCH-------------------HHHHHHHHHHHTTTC-C
T ss_pred cCCCcEEEEecCCchHHHHHHHHHHHCCC------EEEEEeCCH-------------------HHHHHHHHHHHhcCC-C
Confidence 356788999996 8999999999999997 888886542 344555566665543 2
Q ss_pred EEEEeecccCCCccc---ccc--hhccCCCcEEEEccC
Q 002073 651 NIEALQNRVGPETEN---VFD--DTFWENITCVINALD 683 (972)
Q Consensus 651 ~I~~~~~~v~~~~e~---i~~--~~f~~~~DvVi~alD 683 (972)
++..+...+....+. ++. ...+...|+||++..
T Consensus 63 ~~~~~~~Dl~~~~~~v~~~~~~~~~~~g~iD~lv~nAg 100 (311)
T 3o26_A 63 NVVFHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAG 100 (311)
T ss_dssp SEEEEECCTTSCHHHHHHHHHHHHHHHSSCCEEEECCC
T ss_pred ceEEEEccCCCcHHHHHHHHHHHHHhCCCCCEEEECCc
Confidence 566666566543111 110 112346788887643
No 151
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=90.85 E-value=0.19 Score=54.20 Aligned_cols=33 Identities=24% Similarity=0.314 Sum_probs=31.0
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCC
Q 002073 178 ASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 211 (972)
Q Consensus 178 ~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d 211 (972)
+++|+|+|+||.|..++..|...| .+|++++.+
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G-~~v~V~nRt 150 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQG-LQVSVLNRS 150 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCC
Confidence 789999999999999999999999 999999754
No 152
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=90.85 E-value=0.34 Score=51.92 Aligned_cols=35 Identities=14% Similarity=0.247 Sum_probs=30.6
Q ss_pred HhcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 573 LEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 573 L~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
+..++++|+|+|++|..++..|+..|. +++|+|.+
T Consensus 117 ~~~~~vlvlGaGg~g~a~a~~L~~~G~------~v~v~~R~ 151 (272)
T 1p77_A 117 RPNQHVLILGAGGATKGVLLPLLQAQQ------NIVLANRT 151 (272)
T ss_dssp CTTCEEEEECCSHHHHTTHHHHHHTTC------EEEEEESS
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCC------EEEEEECC
Confidence 467899999999999999999999995 88888643
No 153
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=90.74 E-value=0.39 Score=50.76 Aligned_cols=85 Identities=15% Similarity=0.145 Sum_probs=56.0
Q ss_pred HhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCcE
Q 002073 573 LEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLN 651 (972)
Q Consensus 573 L~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~~ 651 (972)
|.+++++|.|+ ||||.++++.|+..|. +++++|.+. .+.+.+++.+....+..+
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~G~------~V~~~~r~~-------------------~~~~~~~~~l~~~~~~~~ 60 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEAGA------AVAFCARDG-------------------ERLRAAESALRQRFPGAR 60 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC------EEEEEESCH-------------------HHHHHHHHHHHHHSTTCC
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC------EEEEEeCCH-------------------HHHHHHHHHHHHhcCCce
Confidence 56788999995 8899999999999998 788887532 345556666666666666
Q ss_pred EEEeecccCCCcc--cccc--hhccCCCcEEEEcc
Q 002073 652 IEALQNRVGPETE--NVFD--DTFWENITCVINAL 682 (972)
Q Consensus 652 I~~~~~~v~~~~e--~i~~--~~f~~~~DvVi~al 682 (972)
+..+...++.... ..+. .+-+...|++|++.
T Consensus 61 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnA 95 (265)
T 3lf2_A 61 LFASVCDVLDALQVRAFAEACERTLGCASILVNNA 95 (265)
T ss_dssp EEEEECCTTCHHHHHHHHHHHHHHHCSCSEEEECC
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 7766666653221 1111 11234677777764
No 154
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=90.64 E-value=0.24 Score=53.31 Aligned_cols=80 Identities=15% Similarity=0.208 Sum_probs=51.6
Q ss_pred HhcCcEEEEc-CCcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCcE
Q 002073 573 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLN 651 (972)
Q Consensus 573 L~~~kVlIVG-aGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~~ 651 (972)
+..++++|+| +||+|..+++.|+..|. +++++|.+. .|++.+++.+... +.+.
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G~------~V~i~~R~~-------------------~~~~~l~~~~~~~-~~~~ 170 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEGA------EVVLCGRKL-------------------DKAQAAADSVNKR-FKVN 170 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC------EEEEEESSH-------------------HHHHHHHHHHHHH-HTCC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcC------EEEEEECCH-------------------HHHHHHHHHHHhc-CCcE
Confidence 5678999999 89999999999999998 588886431 3455555555432 1222
Q ss_pred EEEeecccCCCcccccchhccCCCcEEEEccC
Q 002073 652 IEALQNRVGPETENVFDDTFWENITCVINALD 683 (972)
Q Consensus 652 I~~~~~~v~~~~e~i~~~~f~~~~DvVi~alD 683 (972)
+.. ..+... +.+ ...++.+|+||++..
T Consensus 171 ~~~--~D~~~~-~~~--~~~~~~~DvlVn~ag 197 (287)
T 1lu9_A 171 VTA--AETADD-ASR--AEAVKGAHFVFTAGA 197 (287)
T ss_dssp CEE--EECCSH-HHH--HHHTTTCSEEEECCC
T ss_pred EEE--ecCCCH-HHH--HHHHHhCCEEEECCC
Confidence 222 122211 111 244667899999974
No 155
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=90.57 E-value=0.89 Score=49.35 Aligned_cols=74 Identities=23% Similarity=0.293 Sum_probs=48.3
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcC-CEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHH---hcCCCEEEEe
Q 002073 178 ASNILVSGMQGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQE---LNNAVVLSTL 253 (972)
Q Consensus 178 ~s~VlIvG~gGlG~EiaKNLvLaGV-g~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~e---LNp~V~V~~~ 253 (972)
..+|+|+|+|++|+.+|..|+..|. +.|+++|.+. .+++..+..+.. +.+.+.+...
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~-------------------~~~~~~~~~~~~~~~~~~~~~v~~~ 67 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK-------------------ERVEAEVLDMQHGSSFYPTVSIDGS 67 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH-------------------HHHHHHHHHHHHTGGGSTTCEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh-------------------hHHHHHHHHHHhhhhhcCCeEEEeC
Confidence 3589999999999999999999995 4899998542 122211111111 2234455443
Q ss_pred ecCCChhhhcCCceEEEcCC
Q 002073 254 TSKLTKEQLSDFQAVVFTDI 273 (972)
Q Consensus 254 ~~~l~~e~l~~fdvVV~~~~ 273 (972)
. +.+.+.++|+||+|..
T Consensus 68 ~---~~~~~~~aD~Vii~v~ 84 (319)
T 1lld_A 68 D---DPEICRDADMVVITAG 84 (319)
T ss_dssp S---CGGGGTTCSEEEECCC
T ss_pred C---CHHHhCCCCEEEECCC
Confidence 2 2345788999999873
No 156
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=90.55 E-value=0.8 Score=47.26 Aligned_cols=98 Identities=12% Similarity=0.120 Sum_probs=61.3
Q ss_pred cCeEEEEc-CChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEeecC
Q 002073 178 ASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSK 256 (972)
Q Consensus 178 ~s~VlIvG-~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~~~ 256 (972)
.++|+|.| .|++|.++++.|+..|--+|++++.+.-....+.. + .++.+..+
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~-------------------------~--~~~~~~~D 75 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYP-------------------------T--NSQIIMGD 75 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCC-------------------------T--TEEEEECC
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccccc-------------------------C--CcEEEEec
Confidence 35899999 69999999999999994478888765422211110 1 24445555
Q ss_pred CCh-----hhhcCCceEEEcCCC--HH-HHHHHHHHHHhcCCCc-eeEEeeecceeE
Q 002073 257 LTK-----EQLSDFQAVVFTDIS--LD-KAIEFDDFCHNHQPAI-SFIKAEVRGLFG 304 (972)
Q Consensus 257 l~~-----e~l~~fdvVV~~~~~--~~-~~~~ln~~c~~~~~~I-pfI~a~~~G~~G 304 (972)
+++ ..+++.|+||.+... .. ....+-+.|++.+ + .||..++.+.++
T Consensus 76 l~d~~~~~~~~~~~D~vv~~a~~~~~~~~~~~~~~~~~~~~--~~~iV~iSS~~~~~ 130 (236)
T 3qvo_A 76 VLNHAALKQAMQGQDIVYANLTGEDLDIQANSVIAAMKACD--VKRLIFVLSLGIYD 130 (236)
T ss_dssp TTCHHHHHHHHTTCSEEEEECCSTTHHHHHHHHHHHHHHTT--CCEEEEECCCCC--
T ss_pred CCCHHHHHHHhcCCCEEEEcCCCCchhHHHHHHHHHHHHcC--CCEEEEEecceecC
Confidence 532 346678998876542 22 2335566777777 4 477777766654
No 157
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=90.47 E-value=1.4 Score=48.37 Aligned_cols=71 Identities=18% Similarity=0.236 Sum_probs=48.9
Q ss_pred eEEEEcCChHHHHHHHHHHHhcC-CEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhc---CCCEEEEeec
Q 002073 180 NILVSGMQGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELN---NAVVLSTLTS 255 (972)
Q Consensus 180 ~VlIvG~gGlG~EiaKNLvLaGV-g~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLN---p~V~V~~~~~ 255 (972)
+|.|+|+|.+|..+|..|+..|. +.|+++|.+. .+++.....+.... +.+.+.. .
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~-------------------~~~~~~~~~l~~~~~~~~~~~i~~--~ 60 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK-------------------KRAEGDALDLIHGTPFTRRANIYA--G 60 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH-------------------HHHHHHHHHHHHHGGGSCCCEEEE--C
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh-------------------HHHHHHHHHHHhhhhhcCCcEEEe--C
Confidence 79999999999999999999994 5799988532 23333333333322 3445544 2
Q ss_pred CCChhhhcCCceEEEcCC
Q 002073 256 KLTKEQLSDFQAVVFTDI 273 (972)
Q Consensus 256 ~l~~e~l~~fdvVV~~~~ 273 (972)
+.+.++++|+||.|..
T Consensus 61 --d~~~~~~aDvViiav~ 76 (319)
T 1a5z_A 61 --DYADLKGSDVVIVAAG 76 (319)
T ss_dssp --CGGGGTTCSEEEECCC
T ss_pred --CHHHhCCCCEEEEccC
Confidence 2456789999999875
No 158
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=90.44 E-value=0.78 Score=48.78 Aligned_cols=87 Identities=11% Similarity=0.051 Sum_probs=53.9
Q ss_pred CcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCcEEEEe
Q 002073 576 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEAL 655 (972)
Q Consensus 576 ~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~~I~~~ 655 (972)
.+|.|||+|.+|+.+++.|+. |. +++++|.+. .|++.+++. ++.+.
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~------~V~~~~~~~-------------------~~~~~~~~~------g~~~~-- 47 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RF------PTLVWNRTF-------------------EKALRHQEE------FGSEA-- 47 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TS------CEEEECSST-------------------HHHHHHHHH------HCCEE--
T ss_pred CeEEEEcccHHHHHHHHHHhC-CC------eEEEEeCCH-------------------HHHHHHHHC------CCccc--
Confidence 479999999999999999999 97 688876432 122222221 11111
Q ss_pred ecccCCCcccccchhccCCCcEEEEccCChH-HHHHHhhhh--hccccceEeccc
Q 002073 656 QNRVGPETENVFDDTFWENITCVINALDNVN-ARLYVDQRC--LYFQKPLLESGT 707 (972)
Q Consensus 656 ~~~v~~~~e~i~~~~f~~~~DvVi~alDn~~-aR~~v~~~c--~~~~kPli~sgt 707 (972)
. . .+...++|+||.|+-+.. .+..+.... ...+..+++.++
T Consensus 48 ~------~-----~~~~~~~D~vi~~v~~~~~~~~v~~~l~~~l~~~~~vv~~s~ 91 (289)
T 2cvz_A 48 V------P-----LERVAEARVIFTCLPTTREVYEVAEALYPYLREGTYWVDATS 91 (289)
T ss_dssp C------C-----GGGGGGCSEEEECCSSHHHHHHHHHHHTTTCCTTEEEEECSC
T ss_pred C------H-----HHHHhCCCEEEEeCCChHHHHHHHHHHHhhCCCCCEEEECCC
Confidence 0 0 233467899999998775 555554432 233556665443
No 159
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=90.38 E-value=0.57 Score=49.20 Aligned_cols=39 Identities=23% Similarity=0.198 Sum_probs=31.2
Q ss_pred HHHhhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCc
Q 002073 173 MRRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGT 212 (972)
Q Consensus 173 q~kL~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~ 212 (972)
...+...+|.|||+|.+|..+|++|+..|. .|+++|.+.
T Consensus 14 ~~~~~~~kIgiIG~G~mG~alA~~L~~~G~-~V~~~~r~~ 52 (245)
T 3dtt_A 14 NLYFQGMKIAVLGTGTVGRTMAGALADLGH-EVTIGTRDP 52 (245)
T ss_dssp -----CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCH
T ss_pred ccccCCCeEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCh
Confidence 347888999999999999999999999996 799998653
No 160
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=90.35 E-value=0.6 Score=51.68 Aligned_cols=75 Identities=21% Similarity=0.274 Sum_probs=52.8
Q ss_pred hcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCC---Cc
Q 002073 574 EDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINP---RL 650 (972)
Q Consensus 574 ~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP---~~ 650 (972)
...||.|||+|.+|+.++..|+..|+. ++|+++|.+ +.|++..+..+.+..| .+
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~----~el~l~D~~-------------------~~k~~g~a~DL~~~~~~~~~~ 64 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIA----QEIGIVDIF-------------------KDKTKGDAIDLEDALPFTSPK 64 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCC----SEEEEECSC-------------------HHHHHHHHHHHHTTGGGSCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCC----CeEEEEeCC-------------------hHHHHHHHhhHhhhhhhcCCc
Confidence 356899999999999999999999984 589998743 2456666666665544 33
Q ss_pred EEEEeecccCCCcccccchhccCCCcEEEEccC
Q 002073 651 NIEALQNRVGPETENVFDDTFWENITCVINALD 683 (972)
Q Consensus 651 ~I~~~~~~v~~~~e~i~~~~f~~~~DvVi~alD 683 (972)
++.. . . .+-+.++|+||.+..
T Consensus 65 ~i~~--~-----~-----~~a~~~aDiVvi~ag 85 (326)
T 3vku_A 65 KIYS--A-----E-----YSDAKDADLVVITAG 85 (326)
T ss_dssp EEEE--C-----C-----GGGGTTCSEEEECCC
T ss_pred EEEE--C-----c-----HHHhcCCCEEEECCC
Confidence 3321 1 1 123678999999864
No 161
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=90.30 E-value=0.29 Score=56.57 Aligned_cols=33 Identities=24% Similarity=0.355 Sum_probs=29.1
Q ss_pred cCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 575 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 575 ~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
.++|+|+|+|++|..+++.|+..|. +++++|.+
T Consensus 3 ~k~VlViGaG~iG~~ia~~L~~~G~------~V~v~~R~ 35 (450)
T 1ff9_A 3 TKSVLMLGSGFVTRPTLDVLTDSGI------KVTVACRT 35 (450)
T ss_dssp CCEEEEECCSTTHHHHHHHHHTTTC------EEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcC------EEEEEECC
Confidence 5689999999999999999999886 68888754
No 162
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=90.23 E-value=0.2 Score=47.93 Aligned_cols=86 Identities=10% Similarity=0.135 Sum_probs=54.2
Q ss_pred cCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCcEEEE
Q 002073 575 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEA 654 (972)
Q Consensus 575 ~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~~I~~ 654 (972)
+.+|+|+|+|.+|..+++.|...|. .++++|.|.= +.+ .+.+ .++.+
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~------~v~vid~~~~-------------------~~~----~~~~--~g~~~-- 53 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDI------PLVVIETSRT-------------------RVD----ELRE--RGVRA-- 53 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC------CEEEEESCHH-------------------HHH----HHHH--TTCEE--
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC------CEEEEECCHH-------------------HHH----HHHH--cCCCE--
Confidence 4689999999999999999999998 8999987541 222 2222 13332
Q ss_pred eecccCCCcccccchhccCCCcEEEEccCChHHHHHHhhhh
Q 002073 655 LQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRC 695 (972)
Q Consensus 655 ~~~~v~~~~e~i~~~~f~~~~DvVi~alDn~~aR~~v~~~c 695 (972)
+..... ....+...-.+++|+||.++++...-..+-..+
T Consensus 54 i~gd~~--~~~~l~~a~i~~ad~vi~~~~~~~~n~~~~~~a 92 (140)
T 3fwz_A 54 VLGNAA--NEEIMQLAHLECAKWLILTIPNGYEAGEIVASA 92 (140)
T ss_dssp EESCTT--SHHHHHHTTGGGCSEEEECCSCHHHHHHHHHHH
T ss_pred EECCCC--CHHHHHhcCcccCCEEEEECCChHHHHHHHHHH
Confidence 322222 122222223468899999999876554443343
No 163
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=90.22 E-value=1.5 Score=48.08 Aligned_cols=99 Identities=12% Similarity=0.181 Sum_probs=62.9
Q ss_pred hhcCeEEEEc-CChHHHHHHHHHHHh-cCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEe
Q 002073 176 LFASNILVSG-MQGLGAEIAKNLILA-GVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTL 253 (972)
Q Consensus 176 L~~s~VlIvG-~gGlG~EiaKNLvLa-GVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~ 253 (972)
|++.+|||.| .|++|.++++.|... |..+|++++.+. .+.+.+.+.+ . ...+..+
T Consensus 19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~-------------------~~~~~~~~~~---~-~~~v~~~ 75 (344)
T 2gn4_A 19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDE-------------------LKQSEMAMEF---N-DPRMRFF 75 (344)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCH-------------------HHHHHHHHHH---C-CTTEEEE
T ss_pred hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECCh-------------------hhHHHHHHHh---c-CCCEEEE
Confidence 4567899998 599999999999999 988899887532 1222222222 2 2355666
Q ss_pred ecCCCh-----hhhcCCceEEEcCC--C-------HHH--------HHHHHHHHHhcCCCc-eeEEeee
Q 002073 254 TSKLTK-----EQLSDFQAVVFTDI--S-------LDK--------AIEFDDFCHNHQPAI-SFIKAEV 299 (972)
Q Consensus 254 ~~~l~~-----e~l~~fdvVV~~~~--~-------~~~--------~~~ln~~c~~~~~~I-pfI~a~~ 299 (972)
..++++ +.+.+.|+||.+.. . ... ...+-+.|++.+ + .||..++
T Consensus 76 ~~Dl~d~~~l~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~--v~~~V~~SS 142 (344)
T 2gn4_A 76 IGDVRDLERLNYALEGVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNA--ISQVIALST 142 (344)
T ss_dssp ECCTTCHHHHHHHTTTCSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTT--CSEEEEECC
T ss_pred ECCCCCHHHHHHHHhcCCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCC--CCEEEEecC
Confidence 666643 34668899987653 1 111 134556777776 4 4665555
No 164
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=90.13 E-value=0.33 Score=51.06 Aligned_cols=35 Identities=11% Similarity=0.234 Sum_probs=30.4
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcC---CEEEEEeCCc
Q 002073 178 ASNILVSGMQGLGAEIAKNLILAGV---KSVTLHDEGT 212 (972)
Q Consensus 178 ~s~VlIvG~gGlG~EiaKNLvLaGV---g~itLvD~d~ 212 (972)
..+|.|||+|.+|..++++|..+|. ..++++|.+.
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~ 41 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSK 41 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCc
Confidence 3589999999999999999999995 6899998643
No 165
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*
Probab=90.11 E-value=0.1 Score=61.40 Aligned_cols=61 Identities=20% Similarity=0.353 Sum_probs=45.4
Q ss_pred cCchhhhhhhcCHHHH------------------HHHhcCcEEEEcCCcchHHHHHHHHH----ccccCC-CCceEEEEc
Q 002073 555 NSRYDAQISVFGAKLQ------------------KKLEDAKVFIVGSGALGCEFLKNVAL----MGVSCG-NQGKLTITD 611 (972)
Q Consensus 555 ~~RYdrqi~l~G~~~q------------------~kL~~~kVlIVGaGgiG~e~lknLa~----~Gv~~~-~~g~i~iiD 611 (972)
-+||...+.+|..+.| ++|.+.||++.|||+.|+.+++.|.. .|++-. ...+|+++|
T Consensus 282 l~ryr~~ipvFnDDiqGTA~V~lAgllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~~Gl~~eeA~~~i~~vD 361 (605)
T 1o0s_A 282 LDKYQDKYTMFNDDIQGTASVIVAGLLTCTRVTKKLVSQEKYLFFGAGAASTGIAEMIVHQMQNEGISKEEACNRIYLMD 361 (605)
T ss_dssp HHHHTTTSEEEEHHHHHHHHHHHHHHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHTTTCCHHHHHHTEEEEE
T ss_pred HHHhccCCCeeCcccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHHcCCChhhhhCeEEEEE
Confidence 3566666677766555 57889999999999999999999998 564100 026899999
Q ss_pred CCcc
Q 002073 612 DDVI 615 (972)
Q Consensus 612 ~D~I 615 (972)
..-+
T Consensus 362 ~~Gl 365 (605)
T 1o0s_A 362 IDGL 365 (605)
T ss_dssp TTEE
T ss_pred CCCc
Confidence 8644
No 166
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=89.92 E-value=0.54 Score=50.46 Aligned_cols=33 Identities=21% Similarity=0.288 Sum_probs=28.7
Q ss_pred cCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 575 DAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 575 ~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
.++|+|.|+ |.||+.+++.|+..|. ++++++.+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~------~V~~~~r~ 35 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGN------TPIILTRS 35 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCC------EEEEEeCC
Confidence 468999995 8899999999999987 78888765
No 167
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=89.87 E-value=0.55 Score=47.78 Aligned_cols=32 Identities=13% Similarity=0.309 Sum_probs=27.3
Q ss_pred CcEEEEcC-CcchHHHHHHHH-HccccCCCCceEEEEcCC
Q 002073 576 AKVFIVGS-GALGCEFLKNVA-LMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 576 ~kVlIVGa-GgiG~e~lknLa-~~Gv~~~~~g~i~iiD~D 613 (972)
++|+|.|+ |+||.++++.|+ ..|. ++++++.+
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~------~V~~~~r~ 39 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDM------HITLYGRQ 39 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCC------EEEEEESS
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCc------eEEEEecC
Confidence 35999995 999999999999 8887 78887654
No 168
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=89.82 E-value=0.52 Score=52.55 Aligned_cols=77 Identities=17% Similarity=0.193 Sum_probs=52.0
Q ss_pred hhcCeEEEEcC-ChHHHHHHHHHHHhcC-CEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHh-cCCCEEEE
Q 002073 176 LFASNILVSGM-QGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQEL-NNAVVLST 252 (972)
Q Consensus 176 L~~s~VlIvG~-gGlG~EiaKNLvLaGV-g~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eL-Np~V~V~~ 252 (972)
|...+|.|+|+ |.+|+.+|..+++.|. ..|+|+|-+ +.|++..+.-|+.. .|...+..
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~-------------------~~k~~g~a~DL~~~~~~~~~i~~ 66 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPF-------------------AVGLEGVAEEIRHCGFEGLNLTF 66 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSC-------------------HHHHHHHHHHHHHHCCTTCCCEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCC-------------------chhHHHHHHhhhhCcCCCCceEE
Confidence 45679999997 9999999999999997 689999842 22455444444443 23333332
Q ss_pred eecCCChhhhcCCceEEEcCC
Q 002073 253 LTSKLTKEQLSDFQAVVFTDI 273 (972)
Q Consensus 253 ~~~~l~~e~l~~fdvVV~~~~ 273 (972)
. .+ ..+.+++.|+||.|..
T Consensus 67 t-~d-~~~al~dADvVvitaG 85 (343)
T 3fi9_A 67 T-SD-IKEALTDAKYIVSSGG 85 (343)
T ss_dssp E-SC-HHHHHTTEEEEEECCC
T ss_pred c-CC-HHHHhCCCCEEEEccC
Confidence 2 11 1245789999998854
No 169
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=89.79 E-value=1 Score=49.49 Aligned_cols=36 Identities=25% Similarity=0.245 Sum_probs=30.0
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCc
Q 002073 176 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGT 212 (972)
Q Consensus 176 L~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~ 212 (972)
+.-.+|.|||+|.+|.-+|.+|+.+|. .|+++|.+.
T Consensus 4 ~~~~kI~vIGaG~MG~~iA~~la~~G~-~V~l~d~~~ 39 (319)
T 2dpo_A 4 PAAGDVLIVGSGLVGRSWAMLFASGGF-RVKLYDIEP 39 (319)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHTTC-CEEEECSCH
T ss_pred CCCceEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence 445789999999999999999999998 799998643
No 170
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=89.78 E-value=0.26 Score=51.96 Aligned_cols=84 Identities=12% Similarity=0.204 Sum_probs=52.3
Q ss_pred HHhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCc
Q 002073 572 KLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRL 650 (972)
Q Consensus 572 kL~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~ 650 (972)
.+.+++++|.|+ |+||.++++.|+..|. +++++|.+. .+.+.+.+.+.+..+
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~------~V~~~~r~~-------------------~~~~~~~~~~~~~~~-- 78 (262)
T 3rkr_A 26 SLSGQVAVVTGASRGIGAAIARKLGSLGA------RVVLTARDV-------------------EKLRAVEREIVAAGG-- 78 (262)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTC------EEEEEESCH-------------------HHHHHHHHHHHHTTC--
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCC------EEEEEECCH-------------------HHHHHHHHHHHHhCC--
Confidence 366788999995 8999999999999998 788887532 344455555555443
Q ss_pred EEEEeecccCCCcc--cccc--hhccCCCcEEEEcc
Q 002073 651 NIEALQNRVGPETE--NVFD--DTFWENITCVINAL 682 (972)
Q Consensus 651 ~I~~~~~~v~~~~e--~i~~--~~f~~~~DvVi~al 682 (972)
++..+...++.... ..+. .+.+...|+||++.
T Consensus 79 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~A 114 (262)
T 3rkr_A 79 EAESHACDLSHSDAIAAFATGVLAAHGRCDVLVNNA 114 (262)
T ss_dssp EEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECC
T ss_pred ceeEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 55555555543211 1111 01234567777763
No 171
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=89.77 E-value=1.2 Score=48.38 Aligned_cols=36 Identities=22% Similarity=0.293 Sum_probs=30.5
Q ss_pred HhhcCeEEEEcC-ChHHHHHHHHHHHhcCCEEEEEeCC
Q 002073 175 RLFASNILVSGM-QGLGAEIAKNLILAGVKSVTLHDEG 211 (972)
Q Consensus 175 kL~~s~VlIvG~-gGlG~EiaKNLvLaGVg~itLvD~d 211 (972)
.+.+.+|||.|+ |++|..+++.|+..|. +|+++|..
T Consensus 17 ~~~~~~vlVTGasG~iG~~l~~~L~~~g~-~V~~~~r~ 53 (330)
T 2pzm_A 17 RGSHMRILITGGAGCLGSNLIEHWLPQGH-EILVIDNF 53 (330)
T ss_dssp TTTCCEEEEETTTSHHHHHHHHHHGGGTC-EEEEEECC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECC
Confidence 455678999996 9999999999999995 78888864
No 172
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=89.74 E-value=2.8 Score=45.06 Aligned_cols=107 Identities=12% Similarity=0.059 Sum_probs=63.5
Q ss_pred hhcCeEEEEcC-ChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEe-
Q 002073 176 LFASNILVSGM-QGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTL- 253 (972)
Q Consensus 176 L~~s~VlIvG~-gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~- 253 (972)
+.+.+|||.|. |++|..+++.|...|. +|++++.+. .+.+.+.+.+.+..+ -.++.+
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~-~~~~~~~ 67 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSA-------------------SKLANLQKRWDAKYP-GRFETAV 67 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSH-------------------HHHHHHHHHHHHHST-TTEEEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCc-------------------ccHHHHHHHhhccCC-CceEEEE
Confidence 34678999996 9999999999999996 677766321 123333334433332 234444
Q ss_pred ecCCCh-----hhhcCCceEEEcCC------CHH--------HHHHHHHHHHh-cCCCceeEEeeecceeE
Q 002073 254 TSKLTK-----EQLSDFQAVVFTDI------SLD--------KAIEFDDFCHN-HQPAISFIKAEVRGLFG 304 (972)
Q Consensus 254 ~~~l~~-----e~l~~fdvVV~~~~------~~~--------~~~~ln~~c~~-~~~~IpfI~a~~~G~~G 304 (972)
..++++ +.+++.|+||.+.. +.. ....+-+.|++ .+ ...||.+++.+.+|
T Consensus 68 ~~D~~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~-~~~iv~~SS~~~~~ 137 (342)
T 1y1p_A 68 VEDMLKQGAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPS-VKRFVLTSSTVSAL 137 (342)
T ss_dssp CSCTTSTTTTTTTTTTCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTT-CCEEEEECCGGGTC
T ss_pred ecCCcChHHHHHHHcCCCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCC-CcEEEEeccHHHhc
Confidence 444432 34567899997642 222 22344566764 33 14677777765543
No 173
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=89.72 E-value=0.45 Score=51.69 Aligned_cols=37 Identities=19% Similarity=0.428 Sum_probs=31.3
Q ss_pred HHHhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 571 KKLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 571 ~kL~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
+.+.+++|+|.|+ |+||..+++.|+..|. +++++|.+
T Consensus 16 ~~~~~~~vlVTGasG~iG~~l~~~L~~~g~------~V~~~~r~ 53 (330)
T 2pzm_A 16 PRGSHMRILITGGAGCLGSNLIEHWLPQGH------EILVIDNF 53 (330)
T ss_dssp STTTCCEEEEETTTSHHHHHHHHHHGGGTC------EEEEEECC
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEECC
Confidence 3455779999997 9999999999999987 88888764
No 174
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=89.72 E-value=1.3 Score=48.75 Aligned_cols=72 Identities=17% Similarity=0.235 Sum_probs=52.6
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcC-CEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhc---CCCEEEEee
Q 002073 179 SNILVSGMQGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELN---NAVVLSTLT 254 (972)
Q Consensus 179 s~VlIvG~gGlG~EiaKNLvLaGV-g~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLN---p~V~V~~~~ 254 (972)
.+|.|+|+|.+|..++-.|+..|. .+|.|+|- -..|++..+..|.... +.+++..
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di-------------------~~~~~~g~~~dl~~~~~~~~~~~v~~-- 64 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDV-------------------VKDRTKGDALDLEDAQAFTAPKKIYS-- 64 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS-------------------SHHHHHHHHHHHHGGGGGSCCCEEEE--
T ss_pred CEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeC-------------------CchHHHHHHHHHHHHHHhcCCeEEEE--
Confidence 689999999999999999999884 57888883 1235555555555543 4455554
Q ss_pred cCCChhhhcCCceEEEcCC
Q 002073 255 SKLTKEQLSDFQAVVFTDI 273 (972)
Q Consensus 255 ~~l~~e~l~~fdvVV~~~~ 273 (972)
+ +.+.+++.|+||.+..
T Consensus 65 ~--~~~a~~~aDvVii~ag 81 (318)
T 1ez4_A 65 G--EYSDCKDADLVVITAG 81 (318)
T ss_dssp C--CGGGGTTCSEEEECCC
T ss_pred C--CHHHhCCCCEEEECCC
Confidence 2 3456889999999865
No 175
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=89.70 E-value=0.6 Score=53.34 Aligned_cols=91 Identities=16% Similarity=0.195 Sum_probs=62.4
Q ss_pred cCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCcEEEE
Q 002073 575 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEA 654 (972)
Q Consensus 575 ~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~~I~~ 654 (972)
+.+|+|+|+|-+|..+++.|...|+ .++++|.|.- +++. +++. ++. .
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~------~vvvId~d~~-------------------~v~~----~~~~--g~~--v 50 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGV------KMVVLDHDPD-------------------HIET----LRKF--GMK--V 50 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC------CEEEEECCHH-------------------HHHH----HHHT--TCC--C
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC------CEEEEECCHH-------------------HHHH----HHhC--CCe--E
Confidence 4689999999999999999999998 8999997742 1111 2221 122 2
Q ss_pred eecccCCCcccccchhccCCCcEEEEccCChHHHHHHhhhhhcccc
Q 002073 655 LQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQK 700 (972)
Q Consensus 655 ~~~~v~~~~e~i~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~~~k 700 (972)
+....+ ...++...-.+++|+||.|+++...-..+-..+...+.
T Consensus 51 i~GDat--~~~~L~~agi~~A~~viv~~~~~~~n~~i~~~ar~~~p 94 (413)
T 3l9w_A 51 FYGDAT--RMDLLESAGAAKAEVLINAIDDPQTNLQLTEMVKEHFP 94 (413)
T ss_dssp EESCTT--CHHHHHHTTTTTCSEEEECCSSHHHHHHHHHHHHHHCT
T ss_pred EEcCCC--CHHHHHhcCCCccCEEEECCCChHHHHHHHHHHHHhCC
Confidence 222222 22233333467899999999999888888877776653
No 176
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=89.68 E-value=0.73 Score=50.87 Aligned_cols=37 Identities=19% Similarity=0.297 Sum_probs=31.0
Q ss_pred HHhcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 572 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 572 kL~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
+....||.|||+|.+|..++..|+..|. ..++++|.|
T Consensus 11 ~~~~~kI~ViGaG~vG~~iA~~la~~g~-----~~V~L~Di~ 47 (328)
T 2hjr_A 11 VIMRKKISIIGAGQIGSTIALLLGQKDL-----GDVYMFDII 47 (328)
T ss_dssp --CCCEEEEECCSHHHHHHHHHHHHTTC-----CEEEEECSS
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCC-----CeEEEEECC
Confidence 3345799999999999999999999998 469999865
No 177
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=89.61 E-value=0.43 Score=50.98 Aligned_cols=37 Identities=22% Similarity=0.408 Sum_probs=30.2
Q ss_pred HHhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCCc
Q 002073 572 KLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDV 614 (972)
Q Consensus 572 kL~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~ 614 (972)
.++.++|+|.|+ |.||..+++.|+..|. +++++|...
T Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~V~~~~r~~ 41 (321)
T 3vps_A 4 NTLKHRILITGGAGFIGGHLARALVASGE------EVTVLDDLR 41 (321)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTC------CEEEECCCS
T ss_pred ccCCCeEEEECCCChHHHHHHHHHHHCCC------EEEEEecCC
Confidence 356789999998 8899999999999997 788887654
No 178
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=89.60 E-value=0.64 Score=49.08 Aligned_cols=97 Identities=9% Similarity=0.042 Sum_probs=63.4
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEeecCC
Q 002073 178 ASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKL 257 (972)
Q Consensus 178 ~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~~~l 257 (972)
..+|||.|+|.+|..+++.|...|. +|+.++.+. .++. .+.. + .++.+..++
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~-~V~~~~r~~-------------------~~~~----~~~~--~--~~~~~~~D~ 56 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGW-RIIGTSRNP-------------------DQME----AIRA--S--GAEPLLWPG 56 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTC-EEEEEESCG-------------------GGHH----HHHH--T--TEEEEESSS
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCC-EEEEEEcCh-------------------hhhh----hHhh--C--CCeEEEecc
Confidence 3689999999999999999999996 677775422 1111 1222 2 245555554
Q ss_pred Ch-hhhcCCceEEEcCCC----HHHHHHHHHHHHh--cCCCceeEEeeecceeE
Q 002073 258 TK-EQLSDFQAVVFTDIS----LDKAIEFDDFCHN--HQPAISFIKAEVRGLFG 304 (972)
Q Consensus 258 ~~-e~l~~fdvVV~~~~~----~~~~~~ln~~c~~--~~~~IpfI~a~~~G~~G 304 (972)
++ + +.++|+||.+... ......+-+.|++ .+ ...||.+++.+.+|
T Consensus 57 ~d~~-~~~~d~vi~~a~~~~~~~~~~~~l~~a~~~~~~~-~~~~v~~Ss~~vyg 108 (286)
T 3ius_A 57 EEPS-LDGVTHLLISTAPDSGGDPVLAALGDQIAARAAQ-FRWVGYLSTTAVYG 108 (286)
T ss_dssp SCCC-CTTCCEEEECCCCBTTBCHHHHHHHHHHHHTGGG-CSEEEEEEEGGGGC
T ss_pred cccc-cCCCCEEEECCCccccccHHHHHHHHHHHhhcCC-ceEEEEeecceecC
Confidence 32 2 7789999987532 2233456677777 44 13688888888776
No 179
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=89.58 E-value=1.2 Score=47.26 Aligned_cols=83 Identities=14% Similarity=0.036 Sum_probs=51.8
Q ss_pred eEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEeecCCCh
Q 002073 180 NILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKLTK 259 (972)
Q Consensus 180 ~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~~~l~~ 259 (972)
+|+|+|+|.+|+.+|++|..+|. .|+++|.+.-....+... ..-|. ......... +.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~r~~~~~~~l~~~-----~~~~~---------------~~~~~~~~~--~~ 58 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGH-EVQGWLRVPQPYCSVNLV-----ETDGS---------------IFNESLTAN--DP 58 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCSEEEEEEE-----CTTSC---------------EEEEEEEES--CH
T ss_pred eEEEECcCHHHHHHHHHHHhCCC-CEEEEEcCccceeeEEEE-----cCCCc---------------eeeeeeeec--Cc
Confidence 79999999999999999999997 899998754222221110 00011 011122122 24
Q ss_pred hhhcCCceEEEcCCCHHHHHHHHHHH
Q 002073 260 EQLSDFQAVVFTDISLDKAIEFDDFC 285 (972)
Q Consensus 260 e~l~~fdvVV~~~~~~~~~~~ln~~c 285 (972)
+.+.++|+||+|..+......+.++.
T Consensus 59 ~~~~~~d~vi~~v~~~~~~~v~~~l~ 84 (291)
T 1ks9_A 59 DFLATSDLLLVTLKAWQVSDAVKSLA 84 (291)
T ss_dssp HHHHTCSEEEECSCGGGHHHHHHHHH
T ss_pred cccCCCCEEEEEecHHhHHHHHHHHH
Confidence 56778999999987655444444443
No 180
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=89.57 E-value=0.45 Score=52.00 Aligned_cols=63 Identities=16% Similarity=0.252 Sum_probs=44.1
Q ss_pred HhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCcE
Q 002073 573 LEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLN 651 (972)
Q Consensus 573 L~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~~ 651 (972)
+.+++|+|.|+ ||||.++++.|+..|. +++++|.+. .|.+.+++.+....++.+
T Consensus 6 l~~k~vlVTGas~gIG~~la~~l~~~G~------~Vv~~~r~~-------------------~~~~~~~~~l~~~~~~~~ 60 (319)
T 3ioy_A 6 FAGRTAFVTGGANGVGIGLVRQLLNQGC------KVAIADIRQ-------------------DSIDKALATLEAEGSGPE 60 (319)
T ss_dssp CTTCEEEEETTTSTHHHHHHHHHHHTTC------EEEEEESCH-------------------HHHHHHHHHHHHHTCGGG
T ss_pred CCCCEEEEcCCchHHHHHHHHHHHHCCC------EEEEEECCH-------------------HHHHHHHHHHHhcCCCCe
Confidence 45678999996 8999999999999998 788887542 344445555555555445
Q ss_pred EEEeecccC
Q 002073 652 IEALQNRVG 660 (972)
Q Consensus 652 I~~~~~~v~ 660 (972)
+..+...++
T Consensus 61 ~~~~~~Dl~ 69 (319)
T 3ioy_A 61 VMGVQLDVA 69 (319)
T ss_dssp EEEEECCTT
T ss_pred EEEEECCCC
Confidence 555555554
No 181
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=89.49 E-value=0.52 Score=52.00 Aligned_cols=35 Identities=20% Similarity=0.387 Sum_probs=31.2
Q ss_pred hcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 574 EDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 574 ~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
...||.|||+|.+|+.++..|+..|+ ++|+++|-+
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~~~~-----~~v~l~Di~ 38 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALIKQL-----GDVVLFDIA 38 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-----CEEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-----ceEEEEeCC
Confidence 45799999999999999999999998 589999865
No 182
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=89.44 E-value=1.2 Score=49.06 Aligned_cols=72 Identities=17% Similarity=0.202 Sum_probs=50.0
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHH----HhcCCCEEEEee
Q 002073 179 SNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQ----ELNNAVVLSTLT 254 (972)
Q Consensus 179 s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~----eLNp~V~V~~~~ 254 (972)
.+|.|+|+|.+|..+|..|+..|.-.|+|+|-+. .|++.....+. .+....+++...
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~-------------------~~l~~~~~~l~~~~~~~~~~~~i~~t~ 65 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK-------------------NMPHGKALDTSHTNVMAYSNCKVSGSN 65 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS-------------------SHHHHHHHHHHTHHHHHTCCCCEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH-------------------HHHHHHHHHHHhhhhhcCCCcEEEECC
Confidence 5899999999999999999999985599998532 12222222222 334455666543
Q ss_pred cCCChhhhcCCceEEEcC
Q 002073 255 SKLTKEQLSDFQAVVFTD 272 (972)
Q Consensus 255 ~~l~~e~l~~fdvVV~~~ 272 (972)
+ . +.+++.|+||.+.
T Consensus 66 d-~--~al~~aD~Vi~a~ 80 (322)
T 1t2d_A 66 T-Y--DDLAGADVVIVTA 80 (322)
T ss_dssp C-G--GGGTTCSEEEECC
T ss_pred C-H--HHhCCCCEEEEeC
Confidence 2 2 4588999999985
No 183
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=89.32 E-value=0.93 Score=49.31 Aligned_cols=37 Identities=19% Similarity=0.453 Sum_probs=29.1
Q ss_pred HHHhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 571 KKLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 571 ~kL~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
..+..++|+|.|+ |.||..+++.|+..|. +++++|.+
T Consensus 23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~V~~~~r~ 60 (343)
T 2b69_A 23 MEKDRKRILITGGAGFVGSHLTDKLMMDGH------EVTVVDNF 60 (343)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEECC
T ss_pred cccCCCEEEEEcCccHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 4566789999997 9999999999999986 78887753
No 184
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=89.23 E-value=0.51 Score=51.80 Aligned_cols=35 Identities=34% Similarity=0.473 Sum_probs=30.0
Q ss_pred cCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 575 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 575 ~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
..+|.|||+|.+|..+++.|...|.. .+++++|.+
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~----~~V~~~dr~ 67 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFK----GKIYGYDIN 67 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCC----SEEEEECSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCC----CEEEEEECC
Confidence 36899999999999999999999971 478888754
No 185
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A*
Probab=89.20 E-value=0.099 Score=61.31 Aligned_cols=60 Identities=20% Similarity=0.378 Sum_probs=45.2
Q ss_pred CchhhhhhhcCHHHH------------------HHHhcCcEEEEcCCcchHHHHHHHHH----ccccCC-CCceEEEEcC
Q 002073 556 SRYDAQISVFGAKLQ------------------KKLEDAKVFIVGSGALGCEFLKNVAL----MGVSCG-NQGKLTITDD 612 (972)
Q Consensus 556 ~RYdrqi~l~G~~~q------------------~kL~~~kVlIVGaGgiG~e~lknLa~----~Gv~~~-~~g~i~iiD~ 612 (972)
+||...+.+|..+.| ++|.+.||++.|||+.|+-+++.|.. .|+.-. ...+|+++|.
T Consensus 247 ~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~~Gl~~eeA~~~i~~~D~ 326 (564)
T 1pj3_A 247 RKYREKYCTFNDDIQGTAAVALAGLLAAQKVISKPISEHKILFLGAGEAALGIANLIVMSMVENGLSEQEAQKKIWMFDK 326 (564)
T ss_dssp HHHTTTSSEEEHHHHHHHHHHHHHHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHHTTCCHHHHHHTEEEEET
T ss_pred HHhccCCCEeCCCCchHHHHHHHHHHHHHHHhCCcHhHcEEEEeCCCHHHHHHHHHHHHHHHHcCCChHHhhCcEEEEeC
Confidence 566666677766655 57889999999999999999999986 785100 0168999998
Q ss_pred Ccc
Q 002073 613 DVI 615 (972)
Q Consensus 613 D~I 615 (972)
.-+
T Consensus 327 ~Gl 329 (564)
T 1pj3_A 327 YGL 329 (564)
T ss_dssp TEE
T ss_pred CCe
Confidence 644
No 186
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=89.15 E-value=0.24 Score=49.48 Aligned_cols=33 Identities=18% Similarity=0.380 Sum_probs=29.9
Q ss_pred cCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 575 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 575 ~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
+..|+|||+|..|..+|..|++.|+ +++|+|..
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~------~V~v~Ek~ 34 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGH------QVHLFDKS 34 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC------CEEEECSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC------CEEEEECC
Confidence 4569999999999999999999999 89999854
No 187
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=89.14 E-value=0.23 Score=49.44 Aligned_cols=36 Identities=19% Similarity=0.188 Sum_probs=31.3
Q ss_pred HhcCcEEEEcCCcchHHHHHHHHHc-cccCCCCceEEEEcCCc
Q 002073 573 LEDAKVFIVGSGALGCEFLKNVALM-GVSCGNQGKLTITDDDV 614 (972)
Q Consensus 573 L~~~kVlIVGaGgiG~e~lknLa~~-Gv~~~~~g~i~iiD~D~ 614 (972)
+.+.+|+|+|+|.+|..+++.|... |. +++++|.|.
T Consensus 37 ~~~~~v~IiG~G~~G~~~a~~L~~~~g~------~V~vid~~~ 73 (183)
T 3c85_A 37 PGHAQVLILGMGRIGTGAYDELRARYGK------ISLGIEIRE 73 (183)
T ss_dssp CTTCSEEEECCSHHHHHHHHHHHHHHCS------CEEEEESCH
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhccCC------eEEEEECCH
Confidence 3467899999999999999999999 97 789988643
No 188
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=89.07 E-value=1.9 Score=47.12 Aligned_cols=82 Identities=17% Similarity=0.096 Sum_probs=52.0
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcCC-EEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEeecC
Q 002073 178 ASNILVSGMQGLGAEIAKNLILAGVK-SVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSK 256 (972)
Q Consensus 178 ~s~VlIvG~gGlG~EiaKNLvLaGVg-~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~~~ 256 (972)
..+|.|||+|.+|..+|+.|..+|.. .|+++|.+.- +++ .+.++.-... . ..+
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~-------------------~~~----~a~~~G~~~~--~-~~~ 86 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPE-------------------SIS----KAVDLGIIDE--G-TTS 86 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHH-------------------HHH----HHHHTTSCSE--E-ESC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHH-------------------HHH----HHHHCCCcch--h-cCC
Confidence 36899999999999999999999974 7888885321 111 1222221001 1 122
Q ss_pred CChh-hhcCCceEEEcCCCHHHHHHHHHHHH
Q 002073 257 LTKE-QLSDFQAVVFTDISLDKAIEFDDFCH 286 (972)
Q Consensus 257 l~~e-~l~~fdvVV~~~~~~~~~~~ln~~c~ 286 (972)
+ ++ .+.+.|+||+|.........+.++..
T Consensus 87 ~-~~~~~~~aDvVilavp~~~~~~vl~~l~~ 116 (314)
T 3ggo_A 87 I-AKVEDFSPDFVMLSSPVRTFREIAKKLSY 116 (314)
T ss_dssp T-TGGGGGCCSEEEECSCGGGHHHHHHHHHH
T ss_pred H-HHHhhccCCEEEEeCCHHHHHHHHHHHhh
Confidence 2 34 67899999999865444444444443
No 189
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=89.07 E-value=0.63 Score=48.89 Aligned_cols=35 Identities=14% Similarity=0.256 Sum_probs=29.6
Q ss_pred HhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 573 LEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 573 L~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
+.+++++|.|+ |+||.++++.|+..|. +++++|.+
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~ 40 (260)
T 2z1n_A 5 IQGKLAVVTAGSSGLGFASALELARNGA------RLLLFSRN 40 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC------EEEEEeCC
Confidence 45678999995 8999999999999997 78888643
No 190
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=89.07 E-value=0.85 Score=47.07 Aligned_cols=101 Identities=15% Similarity=0.117 Sum_probs=58.4
Q ss_pred hcCcEEEEc-CCcchHHHHHHHHHcc-ccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCcE
Q 002073 574 EDAKVFIVG-SGALGCEFLKNVALMG-VSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLN 651 (972)
Q Consensus 574 ~~~kVlIVG-aGgiG~e~lknLa~~G-v~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~~ 651 (972)
..++|+|.| .|+||.++++.|+..| . ++++++.+.-....+ . .+ +
T Consensus 22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~------~V~~~~R~~~~~~~~-----~--------------------~~--~ 68 (236)
T 3qvo_A 22 HMKNVLILGAGGQIARHVINQLADKQTI------KQTLFARQPAKIHKP-----Y--------------------PT--N 68 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTE------EEEEEESSGGGSCSS-----C--------------------CT--T
T ss_pred cccEEEEEeCCcHHHHHHHHHHHhCCCc------eEEEEEcChhhhccc-----c--------------------cC--C
Confidence 356899999 5999999999999998 5 888887653211110 0 01 3
Q ss_pred EEEeecccCCCcccccchhccCCCcEEEEccCChHHH---HHHhhhhhcccc-ceEecccCCc
Q 002073 652 IEALQNRVGPETENVFDDTFWENITCVINALDNVNAR---LYVDQRCLYFQK-PLLESGTLGA 710 (972)
Q Consensus 652 I~~~~~~v~~~~e~i~~~~f~~~~DvVi~alDn~~aR---~~v~~~c~~~~k-Pli~sgt~G~ 710 (972)
++.+...+... +.+ ...++++|+||++....... ..+-..|...+. .+|..++.+.
T Consensus 69 ~~~~~~Dl~d~-~~~--~~~~~~~D~vv~~a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS~~~ 128 (236)
T 3qvo_A 69 SQIIMGDVLNH-AAL--KQAMQGQDIVYANLTGEDLDIQANSVIAAMKACDVKRLIFVLSLGI 128 (236)
T ss_dssp EEEEECCTTCH-HHH--HHHHTTCSEEEEECCSTTHHHHHHHHHHHHHHTTCCEEEEECCCCC
T ss_pred cEEEEecCCCH-HHH--HHHhcCCCEEEEcCCCCchhHHHHHHHHHHHHcCCCEEEEEeccee
Confidence 44455555421 111 34567889999876543221 233344444443 3555555443
No 191
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=89.06 E-value=1.3 Score=45.39 Aligned_cols=37 Identities=30% Similarity=0.555 Sum_probs=30.7
Q ss_pred HhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 573 LEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 573 L~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
+..++|+|.|+ |+||.++++.|+..|.. .+++++|.+
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~----~~V~~~~r~ 53 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLF----SKVTLIGRR 53 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCC----SEEEEEESS
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCC----CEEEEEEcC
Confidence 66789999995 99999999999999851 278888764
No 192
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=89.04 E-value=2.5 Score=43.26 Aligned_cols=37 Identities=19% Similarity=0.308 Sum_probs=31.6
Q ss_pred hhcCeEEEEc-CChHHHHHHHHHHHhcCC-EEEEEeCCc
Q 002073 176 LFASNILVSG-MQGLGAEIAKNLILAGVK-SVTLHDEGT 212 (972)
Q Consensus 176 L~~s~VlIvG-~gGlG~EiaKNLvLaGVg-~itLvD~d~ 212 (972)
|...+|+|.| .|++|.++++.|+..|.. +|++++.+.
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~ 54 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRK 54 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSC
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCC
Confidence 6678999999 699999999999999973 788887643
No 193
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=89.03 E-value=0.55 Score=48.67 Aligned_cols=36 Identities=14% Similarity=0.314 Sum_probs=31.0
Q ss_pred HHhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 572 KLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 572 kL~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
.+++++++|.|+ |+||.++++.|+..|. +++++|.+
T Consensus 11 ~l~~k~vlITGas~gIG~~ia~~l~~~G~------~V~~~~r~ 47 (247)
T 3i1j_A 11 LLKGRVILVTGAARGIGAAAARAYAAHGA------SVVLLGRT 47 (247)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCC------EEEEEecC
Confidence 466889999996 8999999999999998 78888754
No 194
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=89.03 E-value=0.83 Score=53.15 Aligned_cols=37 Identities=24% Similarity=0.371 Sum_probs=29.5
Q ss_pred HHHhhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeC
Q 002073 173 MRRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDE 210 (972)
Q Consensus 173 q~kL~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~ 210 (972)
...|++.+|.|||+|..|..+|++|+..|. .|+++|.
T Consensus 10 ~~~~~~~~IgvIGlG~MG~~lA~~La~~G~-~V~v~~r 46 (480)
T 2zyd_A 10 HHHMSKQQIGVVGMAVMGRNLALNIESRGY-TVSIFNR 46 (480)
T ss_dssp -----CBSEEEECCSHHHHHHHHHHHTTTC-CEEEECS
T ss_pred ccccCCCeEEEEccHHHHHHHHHHHHhCCC-eEEEEeC
Confidence 457888999999999999999999999997 6888874
No 195
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=89.01 E-value=1.7 Score=46.05 Aligned_cols=30 Identities=27% Similarity=0.249 Sum_probs=27.5
Q ss_pred eEEEEcCChHHHHHHHHHHHhcCCEEEEEeC
Q 002073 180 NILVSGMQGLGAEIAKNLILAGVKSVTLHDE 210 (972)
Q Consensus 180 ~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~ 210 (972)
+|.|||+|.+|..+++.|...|. +|+++|.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~ 31 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSR 31 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred EEEEEcCcHHHHHHHHHHHHCCC-EEEEEEC
Confidence 79999999999999999999997 7888874
No 196
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A
Probab=89.00 E-value=0.098 Score=61.16 Aligned_cols=45 Identities=20% Similarity=0.331 Sum_probs=35.6
Q ss_pred HHHhcCcEEEEcCCcchHHHHHHHHH----ccccCC-CCceEEEEcCCcc
Q 002073 571 KKLEDAKVFIVGSGALGCEFLKNVAL----MGVSCG-NQGKLTITDDDVI 615 (972)
Q Consensus 571 ~kL~~~kVlIVGaGgiG~e~lknLa~----~Gv~~~-~~g~i~iiD~D~I 615 (972)
++|.+.||++.|||+.|+-+++.|.. .|++-. ...+|+++|..-+
T Consensus 278 k~l~d~riv~~GAGaAg~gia~ll~~~~~~~G~~~eeA~~~i~~~D~~Gl 327 (555)
T 1gq2_A 278 NRLSDHTVLFQGAGEAALGIANLIVMAMQKEGVSKEEAIKRIWMVDSKGL 327 (555)
T ss_dssp SCGGGCCEEEECCSHHHHHHHHHHHHHHHHHTCCHHHHHTTEEEEETTEE
T ss_pred CChhhcEEEEECCCHHHHHHHHHHHHHHHHcCCChHHHhCcEEEEECCCe
Confidence 57889999999999999999999998 675100 0168999998644
No 197
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=88.98 E-value=0.32 Score=53.82 Aligned_cols=36 Identities=17% Similarity=0.422 Sum_probs=31.9
Q ss_pred HHhcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 572 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 572 kL~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
.|.+++|.|||.|.||..+++.|...|+ +++.+|.+
T Consensus 134 ~l~gktvGIiGlG~IG~~vA~~l~~~G~------~V~~~dr~ 169 (324)
T 3evt_A 134 TLTGQQLLIYGTGQIGQSLAAKASALGM------HVIGVNTT 169 (324)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred cccCCeEEEECcCHHHHHHHHHHHhCCC------EEEEECCC
Confidence 3667899999999999999999999998 88888864
No 198
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=88.95 E-value=0.83 Score=49.84 Aligned_cols=35 Identities=14% Similarity=0.177 Sum_probs=30.8
Q ss_pred cCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCc
Q 002073 575 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDV 614 (972)
Q Consensus 575 ~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~ 614 (972)
..+|.|||+|.+|+.++++|+..|. .+++++|.+.
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~-----~~V~~~dr~~ 58 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGA-----IDMAAYDAAS 58 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSC-----CEEEEECSSC
T ss_pred CCEEEEECccHHHHHHHHHHHHCCC-----CeEEEEcCCC
Confidence 4689999999999999999999997 6899998653
No 199
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=88.94 E-value=0.91 Score=45.64 Aligned_cols=32 Identities=25% Similarity=0.386 Sum_probs=27.5
Q ss_pred CcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 576 AKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 576 ~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
.||+|.|+ |+||..+++.|+..|. ++++++.+
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~------~V~~~~R~ 33 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGH------EVTAIVRN 33 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCC------EEEEEEcC
Confidence 37999996 8999999999999997 88887653
No 200
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=88.91 E-value=0.64 Score=51.45 Aligned_cols=76 Identities=13% Similarity=0.141 Sum_probs=51.4
Q ss_pred cCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCc--EE
Q 002073 575 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRL--NI 652 (972)
Q Consensus 575 ~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~--~I 652 (972)
..||.|||+|.+|+.++..|+..|+. ++|+++|.+ ..|++..+..|.+..|.. .+
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~----~~l~l~D~~-------------------~~k~~g~a~DL~~~~~~~~~~v 61 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGIT----DELVVIDVN-------------------KEKAMGDVMDLNHGKAFAPQPV 61 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCC----SEEEEECSC-------------------HHHHHHHHHHHHHTGGGSSSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCC----ceEEEEecc-------------------hHHHHHHHHHHHhccccccCCe
Confidence 46899999999999999999999973 589998743 245665555565544432 12
Q ss_pred EEeecccCCCcccccchhccCCCcEEEEccC
Q 002073 653 EALQNRVGPETENVFDDTFWENITCVINALD 683 (972)
Q Consensus 653 ~~~~~~v~~~~e~i~~~~f~~~~DvVi~alD 683 (972)
+..... .+-++++|+||.+..
T Consensus 62 ~i~~~~----------~~a~~~aDvVvi~ag 82 (326)
T 3pqe_A 62 KTSYGT----------YEDCKDADIVCICAG 82 (326)
T ss_dssp EEEEEC----------GGGGTTCSEEEECCS
T ss_pred EEEeCc----------HHHhCCCCEEEEecc
Confidence 211110 123578999999864
No 201
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=88.90 E-value=0.69 Score=50.57 Aligned_cols=35 Identities=20% Similarity=0.293 Sum_probs=30.2
Q ss_pred HhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 573 LEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 573 L~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
+..++|+|.|+ |.||..+++.|+..|. +++++|..
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~------~V~~~~r~ 60 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLKLDQ------KVVGLDNF 60 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEECC
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 56789999997 9999999999999986 78887753
No 202
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=88.87 E-value=0.87 Score=48.61 Aligned_cols=32 Identities=16% Similarity=0.532 Sum_probs=27.8
Q ss_pred CcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 576 AKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 576 ~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
++|+|.|+ |.||..+++.|+..|. +++++|.+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~------~V~~~~r~ 33 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGY------EVVVVDNL 33 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC------EEEEECCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC------EEEEEeCC
Confidence 47999998 8899999999999997 78888653
No 203
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=88.80 E-value=1.9 Score=47.26 Aligned_cols=113 Identities=13% Similarity=0.207 Sum_probs=63.3
Q ss_pred hhcCeEEEEc-CChHHHHHHHHHHH--hcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEE
Q 002073 176 LFASNILVSG-MQGLGAEIAKNLIL--AGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLST 252 (972)
Q Consensus 176 L~~s~VlIvG-~gGlG~EiaKNLvL--aGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~ 252 (972)
|...+|||.| .|++|..+++.|.. .|. +|+++|...-...-..+ ..+.+++.. .+. ...+..
T Consensus 8 ~~~~~vlVTGatG~IG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~~~~----~~~~~~~~~---------~~~-~~~~~~ 72 (362)
T 3sxp_A 8 LENQTILITGGAGFVGSNLAFHFQENHPKA-KVVVLDKFRSNTLFSNN----RPSSLGHFK---------NLI-GFKGEV 72 (362)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHCTTS-EEEEEECCCCC-----------CCCCCCGG---------GGT-TCCSEE
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHhhCCCC-eEEEEECCCcccccccc----chhhhhhhh---------hcc-ccCceE
Confidence 4567999996 59999999999999 786 78888753320000000 000011100 011 112344
Q ss_pred eecCCCh-----hh-hcCCceEEEcCC-------CHH--------HHHHHHHHHHhcCCCceeEEeeecceeEE
Q 002073 253 LTSKLTK-----EQ-LSDFQAVVFTDI-------SLD--------KAIEFDDFCHNHQPAISFIKAEVRGLFGS 305 (972)
Q Consensus 253 ~~~~l~~-----e~-l~~fdvVV~~~~-------~~~--------~~~~ln~~c~~~~~~IpfI~a~~~G~~G~ 305 (972)
+..++++ +. ..++|+||-+.. ... ....+-+.|++.+ ++||.+++.+.+|.
T Consensus 73 ~~~Dl~d~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~--~~~V~~SS~~vyg~ 144 (362)
T 3sxp_A 73 IAADINNPLDLRRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKK--AKVIYASSAGVYGN 144 (362)
T ss_dssp EECCTTCHHHHHHHTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTT--CEEEEEEEGGGGCS
T ss_pred EECCCCCHHHHHHhhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcC--CcEEEeCcHHHhCC
Confidence 4444432 12 456777775432 222 2235667888888 77999998777663
No 204
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=88.75 E-value=1.6 Score=44.26 Aligned_cols=97 Identities=12% Similarity=0.178 Sum_probs=61.5
Q ss_pred CeEEEEc-CChHHHHHHHHHH-HhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEeecC
Q 002073 179 SNILVSG-MQGLGAEIAKNLI-LAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSK 256 (972)
Q Consensus 179 s~VlIvG-~gGlG~EiaKNLv-LaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~~~ 256 (972)
++|+|.| .|++|.++++.|+ ..|. +|++++.+.-+ ++ +.+.+..+ .+..+..+
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~-~V~~~~r~~~~------------------~~----~~~~~~~~--~~~~~~~D 60 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDM-HITLYGRQLKT------------------RI----PPEIIDHE--RVTVIEGS 60 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCC-EEEEEESSHHH------------------HS----CHHHHTST--TEEEEECC
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCc-eEEEEecCccc------------------cc----hhhccCCC--ceEEEECC
Confidence 4599999 5999999999999 8897 78887753210 00 11112223 34555556
Q ss_pred CCh-----hhhcCCceEEEcCC--CHHHHHHHHHHHHhcCCCc-eeEEeeeccee
Q 002073 257 LTK-----EQLSDFQAVVFTDI--SLDKAIEFDDFCHNHQPAI-SFIKAEVRGLF 303 (972)
Q Consensus 257 l~~-----e~l~~fdvVV~~~~--~~~~~~~ln~~c~~~~~~I-pfI~a~~~G~~ 303 (972)
+++ +.+++.|+||.+.. +.. ...+-+.|++.+ + .+|..++.+.+
T Consensus 61 ~~d~~~~~~~~~~~d~vv~~ag~~n~~-~~~~~~~~~~~~--~~~iv~iSs~~~~ 112 (221)
T 3r6d_A 61 FQNPGXLEQAVTNAEVVFVGAMESGSD-MASIVKALSRXN--IRRVIGVSMAGLS 112 (221)
T ss_dssp TTCHHHHHHHHTTCSEEEESCCCCHHH-HHHHHHHHHHTT--CCEEEEEEETTTT
T ss_pred CCCHHHHHHHHcCCCEEEEcCCCCChh-HHHHHHHHHhcC--CCeEEEEeeceec
Confidence 543 35678899998764 344 556666777776 4 46666665543
No 205
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=88.72 E-value=1.1 Score=47.88 Aligned_cols=37 Identities=27% Similarity=0.439 Sum_probs=29.6
Q ss_pred HhhcCeEEEEcC-ChHHHHHHHHHHHhcCCEEEEEeCCc
Q 002073 175 RLFASNILVSGM-QGLGAEIAKNLILAGVKSVTLHDEGT 212 (972)
Q Consensus 175 kL~~s~VlIvG~-gGlG~EiaKNLvLaGVg~itLvD~d~ 212 (972)
.+...+|||.|. |.+|..+++.|...|. +|++++...
T Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~ 41 (321)
T 3vps_A 4 NTLKHRILITGGAGFIGGHLARALVASGE-EVTVLDDLR 41 (321)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTC-CEEEECCCS
T ss_pred ccCCCeEEEECCCChHHHHHHHHHHHCCC-EEEEEecCC
Confidence 456789999997 8899999999999996 688877644
No 206
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=88.65 E-value=0.51 Score=50.29 Aligned_cols=35 Identities=20% Similarity=0.425 Sum_probs=31.8
Q ss_pred HhcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 573 LEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 573 L~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
+.+ +++|+|+|+.|..++..|+..|+ .+|+|+|.+
T Consensus 107 ~~~-~vliiGaGg~a~ai~~~L~~~G~-----~~I~v~nR~ 141 (253)
T 3u62_A 107 VKE-PVVVVGAGGAARAVIYALLQMGV-----KDIWVVNRT 141 (253)
T ss_dssp CCS-SEEEECCSHHHHHHHHHHHHTTC-----CCEEEEESC
T ss_pred CCC-eEEEECcHHHHHHHHHHHHHcCC-----CEEEEEeCC
Confidence 456 99999999999999999999999 899999765
No 207
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=88.59 E-value=1.5 Score=48.49 Aligned_cols=74 Identities=16% Similarity=0.223 Sum_probs=52.7
Q ss_pred hcCeEEEEcCChHHHHHHHHHHHhcC-CEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhc---CCCEEEE
Q 002073 177 FASNILVSGMQGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELN---NAVVLST 252 (972)
Q Consensus 177 ~~s~VlIvG~gGlG~EiaKNLvLaGV-g~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLN---p~V~V~~ 252 (972)
...+|.|+|+|.+|..++-.|+..|. .+|.|+|-+ ..|++..+..|.... ..+++..
T Consensus 8 ~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~-------------------~~~~~g~~~dl~~~~~~~~~~~i~~ 68 (326)
T 2zqz_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF-------------------KDKTKGDAIDLSNALPFTSPKKIYS 68 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC-------------------HHHHHHHHHHHHTTGGGSCCCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC-------------------chHhHHHHHHHHHHHHhcCCeEEEE
Confidence 34689999999999999999999884 578888841 235555455555443 4455554
Q ss_pred eecCCChhhhcCCceEEEcCC
Q 002073 253 LTSKLTKEQLSDFQAVVFTDI 273 (972)
Q Consensus 253 ~~~~l~~e~l~~fdvVV~~~~ 273 (972)
+ +.+.+++.|+||.+..
T Consensus 69 --~--~~~a~~~aDvVii~ag 85 (326)
T 2zqz_A 69 --A--EYSDAKDADLVVITAG 85 (326)
T ss_dssp --C--CGGGGGGCSEEEECCC
T ss_pred --C--CHHHhCCCCEEEEcCC
Confidence 2 3556889999999864
No 208
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=88.58 E-value=2.8 Score=44.44 Aligned_cols=81 Identities=17% Similarity=0.126 Sum_probs=50.9
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcCC-EEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEeecCC
Q 002073 179 SNILVSGMQGLGAEIAKNLILAGVK-SVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKL 257 (972)
Q Consensus 179 s~VlIvG~gGlG~EiaKNLvLaGVg-~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~~~l 257 (972)
.+|.|||+|.+|..+|+.|...|.. +|+++|.+. .+++ .+.+..-.. .. ..++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~-------------------~~~~----~~~~~g~~~--~~-~~~~ 55 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP-------------------ESIS----KAVDLGIID--EG-TTSI 55 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH-------------------HHHH----HHHHTTSCS--EE-ESCG
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH-------------------HHHH----HHHHCCCcc--cc-cCCH
Confidence 4799999999999999999999963 688887532 1221 122222110 11 1122
Q ss_pred Chhhhc-CCceEEEcCCCHHHHHHHHHHHH
Q 002073 258 TKEQLS-DFQAVVFTDISLDKAIEFDDFCH 286 (972)
Q Consensus 258 ~~e~l~-~fdvVV~~~~~~~~~~~ln~~c~ 286 (972)
++.+. ++|+||+|..+......+.++..
T Consensus 56 -~~~~~~~aDvVilavp~~~~~~v~~~l~~ 84 (281)
T 2g5c_A 56 -AKVEDFSPDFVMLSSPVRTFREIAKKLSY 84 (281)
T ss_dssp -GGGGGTCCSEEEECSCHHHHHHHHHHHHH
T ss_pred -HHHhcCCCCEEEEcCCHHHHHHHHHHHHh
Confidence 24677 89999999876555555555443
No 209
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=88.57 E-value=1.5 Score=50.98 Aligned_cols=91 Identities=11% Similarity=0.197 Sum_probs=57.7
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhc-C--CEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEee
Q 002073 178 ASNILVSGMQGLGAEIAKNLILAG-V--KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLT 254 (972)
Q Consensus 178 ~s~VlIvG~gGlG~EiaKNLvLaG-V--g~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~ 254 (972)
..+|+|+|+||+|+.+|..|+..+ + ..|+++|.+... +.. .+.+ .+++....
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~~----------------~~~----~~~~-----g~~~~~~~ 67 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGTK----------------VDV----AQQY-----GVSFKLQQ 67 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCCS----------------CCH----HHHH-----TCEEEECC
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchhh----------------hhH----Hhhc-----CCceeEEe
Confidence 568999999999999999999864 5 489999864431 111 1111 13333222
Q ss_pred cC---C---ChhhhcCCceEEEcCCCHHHHHHHHHHHHhcCCCceeEE
Q 002073 255 SK---L---TKEQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIK 296 (972)
Q Consensus 255 ~~---l---~~e~l~~fdvVV~~~~~~~~~~~ln~~c~~~~~~IpfI~ 296 (972)
-+ + -...+++.|+||.+..+. .-..+-+.|++.| +-+|.
T Consensus 68 Vdadnv~~~l~aLl~~~DvVIN~s~~~-~~l~Im~acleaG--v~YlD 112 (480)
T 2ph5_A 68 ITPQNYLEVIGSTLEENDFLIDVSIGI-SSLALIILCNQKG--ALYIN 112 (480)
T ss_dssp CCTTTHHHHTGGGCCTTCEEEECCSSS-CHHHHHHHHHHHT--CEEEE
T ss_pred ccchhHHHHHHHHhcCCCEEEECCccc-cCHHHHHHHHHcC--CCEEE
Confidence 11 1 112455569999765443 3457788999999 76654
No 210
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=88.57 E-value=1.4 Score=48.43 Aligned_cols=72 Identities=17% Similarity=0.168 Sum_probs=50.4
Q ss_pred eEEEEcCChHHHHHHHHHHHhcC-CEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHh----cCCCEEEEee
Q 002073 180 NILVSGMQGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQEL----NNAVVLSTLT 254 (972)
Q Consensus 180 ~VlIvG~gGlG~EiaKNLvLaGV-g~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eL----Np~V~V~~~~ 254 (972)
+|.|+|+|.+|..+|..|+..|+ ..++|+|-+. .|++..+.-|+.. ...+++...
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~-------------------~k~~g~a~DL~~~~~~~~~~~~v~~~- 61 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD-------------------GMPQGKALDMRESSPIHGFDTRVTGT- 61 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST-------------------THHHHHHHHHHHHHHHHTCCCEEEEE-
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch-------------------HHHHHHHHHHhccccccCCCcEEEEC-
Confidence 79999999999999999999997 5899998532 1333333344432 234555533
Q ss_pred cCCChhhhcCCceEEEcCC
Q 002073 255 SKLTKEQLSDFQAVVFTDI 273 (972)
Q Consensus 255 ~~l~~e~l~~fdvVV~~~~ 273 (972)
+ +.+.+++.|+||.|..
T Consensus 62 ~--~~~a~~~aDvVii~ag 78 (314)
T 3nep_X 62 N--DYGPTEDSDVCIITAG 78 (314)
T ss_dssp S--SSGGGTTCSEEEECCC
T ss_pred C--CHHHhCCCCEEEECCC
Confidence 2 2457889999999864
No 211
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=88.46 E-value=0.43 Score=51.53 Aligned_cols=75 Identities=16% Similarity=0.206 Sum_probs=50.2
Q ss_pred HhhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhc--C-CCEEE
Q 002073 175 RLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELN--N-AVVLS 251 (972)
Q Consensus 175 kL~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLN--p-~V~V~ 251 (972)
.+.+++|+|+|.||+|..+|+.|+..| +|+++|.+. .|++..++.+.... . .+.+.
T Consensus 125 ~l~~k~vlV~GaGgiG~aia~~L~~~G--~V~v~~r~~-------------------~~~~~l~~~~~~~~~~~~~~~~d 183 (287)
T 1nvt_A 125 RVKDKNIVIYGAGGAARAVAFELAKDN--NIIIANRTV-------------------EKAEALAKEIAEKLNKKFGEEVK 183 (287)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHTSSS--EEEEECSSH-------------------HHHHHHHHHHHHHHTCCHHHHEE
T ss_pred CcCCCEEEEECchHHHHHHHHHHHHCC--CEEEEECCH-------------------HHHHHHHHHHhhhcccccceeEE
Confidence 367889999999999999999999999 999987421 25555555554321 0 01222
Q ss_pred EeecCCChhhhcCCceEEEcCC
Q 002073 252 TLTSKLTKEQLSDFQAVVFTDI 273 (972)
Q Consensus 252 ~~~~~l~~e~l~~fdvVV~~~~ 273 (972)
+.. + .+.+.++|+||.+..
T Consensus 184 ~~~--~-~~~~~~~DilVn~ag 202 (287)
T 1nvt_A 184 FSG--L-DVDLDGVDIIINATP 202 (287)
T ss_dssp EEC--T-TCCCTTCCEEEECSC
T ss_pred Eee--H-HHhhCCCCEEEECCC
Confidence 221 2 345667888887753
No 212
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=88.41 E-value=1.2 Score=48.80 Aligned_cols=35 Identities=20% Similarity=0.573 Sum_probs=30.2
Q ss_pred cCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 575 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 575 ~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
..||.|||+|.+|..++..|+..|+. ++|+++|-|
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~----~ev~l~Di~ 40 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIA----DEIVLIDAN 40 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCC----SEEEEECSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCC----CEEEEEeCC
Confidence 36899999999999999999988863 689999854
No 213
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=88.38 E-value=1.3 Score=46.96 Aligned_cols=66 Identities=11% Similarity=0.095 Sum_probs=44.5
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEeecCCC
Q 002073 179 SNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKLT 258 (972)
Q Consensus 179 s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~~~l~ 258 (972)
.+|.|+|+|.+|..++++|.. |. .++++|.+. .+++.+.+ .. +.+ .. .
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~-~V~~~~~~~-------------------~~~~~~~~----~g--~~~--~~---~ 49 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RF-PTLVWNRTF-------------------EKALRHQE----EF--GSE--AV---P 49 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TS-CEEEECSST-------------------HHHHHHHH----HH--CCE--EC---C
T ss_pred CeEEEEcccHHHHHHHHHHhC-CC-eEEEEeCCH-------------------HHHHHHHH----CC--Ccc--cC---H
Confidence 379999999999999999999 97 588887421 13332222 11 111 11 3
Q ss_pred hhhhcCCceEEEcCCCHH
Q 002073 259 KEQLSDFQAVVFTDISLD 276 (972)
Q Consensus 259 ~e~l~~fdvVV~~~~~~~ 276 (972)
++.+.++|+||.|..+..
T Consensus 50 ~~~~~~~D~vi~~v~~~~ 67 (289)
T 2cvz_A 50 LERVAEARVIFTCLPTTR 67 (289)
T ss_dssp GGGGGGCSEEEECCSSHH
T ss_pred HHHHhCCCEEEEeCCChH
Confidence 456678999999987654
No 214
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=88.37 E-value=0.75 Score=49.53 Aligned_cols=33 Identities=12% Similarity=0.312 Sum_probs=29.5
Q ss_pred cCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 575 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 575 ~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
.++++|+|+||.|..++..|+..|. +|+|++.+
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~------~v~V~nRt 150 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGL------QVSVLNRS 150 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC------EEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 7899999999999999999999995 88888543
No 215
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=88.32 E-value=1.5 Score=46.76 Aligned_cols=75 Identities=13% Similarity=0.156 Sum_probs=49.3
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEeecCC
Q 002073 179 SNILVSGM-QGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKL 257 (972)
Q Consensus 179 s~VlIvG~-gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~~~l 257 (972)
.+|.|||+ |.+|..++++|...|. +|+++|.+. .+++ .+.+.. +.+ ..
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~-~V~~~~r~~-------------------~~~~----~~~~~g--~~~----~~- 60 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAH-HLAAIEIAP-------------------EGRD----RLQGMG--IPL----TD- 60 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSS-EEEEECCSH-------------------HHHH----HHHHTT--CCC----CC-
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCH-------------------HHHH----HHHhcC--CCc----CC-
Confidence 48999999 9999999999999996 788887422 1222 222221 221 11
Q ss_pred ChhhhcCCceEEEcCCCHHHHHHHHHH
Q 002073 258 TKEQLSDFQAVVFTDISLDKAIEFDDF 284 (972)
Q Consensus 258 ~~e~l~~fdvVV~~~~~~~~~~~ln~~ 284 (972)
..+.+.++|+||+|..+......+.++
T Consensus 61 ~~~~~~~aDvVi~av~~~~~~~v~~~l 87 (286)
T 3c24_A 61 GDGWIDEADVVVLALPDNIIEKVAEDI 87 (286)
T ss_dssp SSGGGGTCSEEEECSCHHHHHHHHHHH
T ss_pred HHHHhcCCCEEEEcCCchHHHHHHHHH
Confidence 234677899999998765544444443
No 216
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=88.31 E-value=1.4 Score=48.05 Aligned_cols=32 Identities=22% Similarity=0.244 Sum_probs=28.8
Q ss_pred CcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEc
Q 002073 576 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITD 611 (972)
Q Consensus 576 ~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD 611 (972)
.||.|||||.+|+.++-.|++.|+. ++|.|+|
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~----~el~L~D 32 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDV----DEIALVD 32 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCC----SEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCC----CEEEEEe
Confidence 3799999999999999999999974 6899987
No 217
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=88.30 E-value=0.86 Score=52.43 Aligned_cols=92 Identities=21% Similarity=0.256 Sum_probs=60.7
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEeec
Q 002073 176 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTS 255 (972)
Q Consensus 176 L~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~~ 255 (972)
+++++|+|+|+|+.|..+|+.|...|. .|+..|..... .+ ...+.|++. .+++. .+
T Consensus 7 ~~~k~v~viG~G~sG~s~A~~l~~~G~-~V~~~D~~~~~----------------~~---~~~~~L~~~--gi~~~--~g 62 (451)
T 3lk7_A 7 FENKKVLVLGLARSGEAAARLLAKLGA-IVTVNDGKPFD----------------EN---PTAQSLLEE--GIKVV--CG 62 (451)
T ss_dssp TTTCEEEEECCTTTHHHHHHHHHHTTC-EEEEEESSCGG----------------GC---HHHHHHHHT--TCEEE--ES
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEeCCccc----------------CC---hHHHHHHhC--CCEEE--EC
Confidence 567899999999999999999999996 89999975410 00 123456555 34443 33
Q ss_pred CCChhhhcC-CceEEEcCC-CHHHHHHHHHHHHhcCCCceeE
Q 002073 256 KLTKEQLSD-FQAVVFTDI-SLDKAIEFDDFCHNHQPAISFI 295 (972)
Q Consensus 256 ~l~~e~l~~-fdvVV~~~~-~~~~~~~ln~~c~~~~~~IpfI 295 (972)
.-.++.+.+ +|+||.+.. +.... .-..+++.+ +|++
T Consensus 63 ~~~~~~~~~~~d~vv~spgi~~~~p--~~~~a~~~g--i~v~ 100 (451)
T 3lk7_A 63 SHPLELLDEDFCYMIKNPGIPYNNP--MVKKALEKQ--IPVL 100 (451)
T ss_dssp CCCGGGGGSCEEEEEECTTSCTTSH--HHHHHHHTT--CCEE
T ss_pred CChHHhhcCCCCEEEECCcCCCCCh--hHHHHHHCC--CcEE
Confidence 334445666 999998754 22211 123567888 8876
No 218
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=88.29 E-value=0.85 Score=49.11 Aligned_cols=32 Identities=31% Similarity=0.440 Sum_probs=29.0
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCC
Q 002073 179 SNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 211 (972)
Q Consensus 179 s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d 211 (972)
.+|.|||+|.+|..+|++|...|. .|+++|.+
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~-~V~~~d~~ 35 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLV 35 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHhCCC-eEEEEcCC
Confidence 589999999999999999999997 78888754
No 219
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=88.28 E-value=1.7 Score=46.45 Aligned_cols=32 Identities=28% Similarity=0.391 Sum_probs=28.6
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCC
Q 002073 179 SNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 211 (972)
Q Consensus 179 s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d 211 (972)
.+|+|+|+|.+|..+|..|..+|. .|+++|.+
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~r~ 35 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGN-DVTLIDQW 35 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCC-cEEEEECC
Confidence 489999999999999999999996 78888753
No 220
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=88.24 E-value=1 Score=47.64 Aligned_cols=34 Identities=15% Similarity=0.316 Sum_probs=29.5
Q ss_pred HhcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 573 LEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 573 L~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
+.. +++|||+|++|..+++.|...|+ +++++|.+
T Consensus 115 l~~-~v~iiG~G~~g~~~a~~l~~~g~------~v~v~~r~ 148 (263)
T 2d5c_A 115 LKG-PALVLGAGGAGRAVAFALREAGL------EVWVWNRT 148 (263)
T ss_dssp CCS-CEEEECCSHHHHHHHHHHHHTTC------CEEEECSS
T ss_pred CCC-eEEEECCcHHHHHHHHHHHHCCC------EEEEEECC
Confidence 567 99999999999999999999987 68888643
No 221
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=88.21 E-value=0.78 Score=48.72 Aligned_cols=97 Identities=16% Similarity=0.104 Sum_probs=56.2
Q ss_pred HHhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCc
Q 002073 572 KLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRL 650 (972)
Q Consensus 572 kL~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~ 650 (972)
.|.+++++|.|+ ||||.++++.|+..|. +++++|.+.-..+.+.+. .. ...+.+.+++.+...++
T Consensus 8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~------~V~~~~r~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~-- 73 (277)
T 3tsc_A 8 KLEGRVAFITGAARGQGRAHAVRMAAEGA------DIIAVDIAGKLPSCVPYD----PA--SPDDLSETVRLVEAANR-- 73 (277)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC------EEEEEECCSCCCTTCCSC----CC--CHHHHHHHHHHHHHTTC--
T ss_pred ccCCCEEEEECCccHHHHHHHHHHHHcCC------EEEEEecccccccccccc----cc--CHHHHHHHHHHHHhcCC--
Confidence 467889999995 8899999999999998 899988653322222211 11 12334444555555444
Q ss_pred EEEEeecccCCCcc--cccc--hhccCCCcEEEEcc
Q 002073 651 NIEALQNRVGPETE--NVFD--DTFWENITCVINAL 682 (972)
Q Consensus 651 ~I~~~~~~v~~~~e--~i~~--~~f~~~~DvVi~al 682 (972)
++..+...+..... ..+. .+-+...|++|++.
T Consensus 74 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lvnnA 109 (277)
T 3tsc_A 74 RIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANA 109 (277)
T ss_dssp CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 45555555543211 1111 01234677777764
No 222
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=88.19 E-value=0.37 Score=52.94 Aligned_cols=88 Identities=15% Similarity=0.130 Sum_probs=61.2
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEeecCC
Q 002073 178 ASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKL 257 (972)
Q Consensus 178 ~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~~~l 257 (972)
..+|+|+|+|.+|..+++.|...|. ++++|.+.- +++ +++ .. +.+..++.
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g~--v~vid~~~~-------------------~~~-----~~~--~~--~~~i~gd~ 164 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSEV--FVLAEDENV-------------------RKK-----VLR--SG--ANFVHGDP 164 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSCE--EEEESCGGG-------------------HHH-----HHH--TT--CEEEESCT
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCc--EEEEeCChh-------------------hhh-----HHh--CC--cEEEEeCC
Confidence 5689999999999999999999887 888885431 222 222 22 33444443
Q ss_pred C-hh-----hhcCCceEEEcCCCHHHHHHHHHHHHhcCCCceeE
Q 002073 258 T-KE-----QLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFI 295 (972)
Q Consensus 258 ~-~e-----~l~~fdvVV~~~~~~~~~~~ln~~c~~~~~~IpfI 295 (972)
+ ++ -++++|.||++..+.+....+-..+++.+++++.|
T Consensus 165 ~~~~~L~~a~i~~a~~vi~~~~~d~~n~~~~~~ar~~~~~~~ii 208 (336)
T 1lnq_A 165 TRVSDLEKANVRGARAVIVDLESDSETIHCILGIRKIDESVRII 208 (336)
T ss_dssp TSHHHHHHTCSTTEEEEEECCSSHHHHHHHHHHHHTTCTTSEEE
T ss_pred CCHHHHHhcChhhccEEEEcCCccHHHHHHHHHHHHHCCCCeEE
Confidence 2 32 25678999998887777778888899988544444
No 223
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=88.19 E-value=1.3 Score=48.47 Aligned_cols=33 Identities=30% Similarity=0.297 Sum_probs=29.1
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCC
Q 002073 178 ASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 211 (972)
Q Consensus 178 ~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d 211 (972)
..+|+|+|+|.+|..+|.+|...|. .|+++|.+
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~-~V~~~~r~ 36 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQ-SVLAWDID 36 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCC-EEEEEeCC
Confidence 3589999999999999999999996 68888753
No 224
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=88.16 E-value=1.1 Score=50.09 Aligned_cols=77 Identities=12% Similarity=0.120 Sum_probs=54.3
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHH-hcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEee
Q 002073 176 LFASNILVSGMQGLGAEIAKNLIL-AGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLT 254 (972)
Q Consensus 176 L~~s~VlIvG~gGlG~EiaKNLvL-aGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~ 254 (972)
....+|+|||+|+.|..++.+|.. .++.+|+++|.+ ..|++..++.+.+. +.+.+....
T Consensus 127 ~~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~-------------------~~~a~~la~~~~~~-~g~~~~~~~ 186 (350)
T 1x7d_A 127 PNARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTD-------------------PLATAKLIANLKEY-SGLTIRRAS 186 (350)
T ss_dssp TTCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSS-------------------HHHHHHHHHHHTTC-TTCEEEECS
T ss_pred ccCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCC-------------------HHHHHHHHHHHHhc-cCceEEEeC
Confidence 356799999999999999999864 478999998742 23666666666442 344444432
Q ss_pred cCCChhhhcCCceEEEcCCC
Q 002073 255 SKLTKEQLSDFQAVVFTDIS 274 (972)
Q Consensus 255 ~~l~~e~l~~fdvVV~~~~~ 274 (972)
+ .++.+.+.|+||.|+.+
T Consensus 187 ~--~~eav~~aDiVi~aTps 204 (350)
T 1x7d_A 187 S--VAEAVKGVDIITTVTAD 204 (350)
T ss_dssp S--HHHHHTTCSEEEECCCC
T ss_pred C--HHHHHhcCCEEEEeccC
Confidence 1 23567789999998764
No 225
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=88.13 E-value=0.81 Score=47.70 Aligned_cols=84 Identities=20% Similarity=0.291 Sum_probs=52.6
Q ss_pred HhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCcE
Q 002073 573 LEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLN 651 (972)
Q Consensus 573 L~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~~ 651 (972)
+++++++|.|+ |+||.++++.|+..|. ..++++|.+.- + ...+.+.+..+..+
T Consensus 3 l~~k~vlVtGas~gIG~~~a~~l~~~G~-----~~v~~~~r~~~-------------------~--~~~~~l~~~~~~~~ 56 (254)
T 1sby_A 3 LTNKNVIFVAALGGIGLDTSRELVKRNL-----KNFVILDRVEN-------------------P--TALAELKAINPKVN 56 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTCC-----SEEEEEESSCC-------------------H--HHHHHHHHHCTTSE
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC-----cEEEEEecCch-------------------H--HHHHHHHHhCCCce
Confidence 45778999995 8899999999999998 44888764320 0 11233444455556
Q ss_pred EEEeecccCCC-cc--cccc--hhccCCCcEEEEcc
Q 002073 652 IEALQNRVGPE-TE--NVFD--DTFWENITCVINAL 682 (972)
Q Consensus 652 I~~~~~~v~~~-~e--~i~~--~~f~~~~DvVi~al 682 (972)
+..+...++.. .. ..+. .+-+...|+||++.
T Consensus 57 ~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~lv~~A 92 (254)
T 1sby_A 57 ITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGA 92 (254)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred EEEEEEecCCChHHHHHHHHHHHHhcCCCCEEEECC
Confidence 77777666643 11 1111 01234789999864
No 226
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=88.12 E-value=0.5 Score=52.77 Aligned_cols=142 Identities=14% Similarity=0.082 Sum_probs=77.7
Q ss_pred ccCchhhHhhhhhhhhHhhhhcCCc------cccc--eeeEeeeccCCCCCCCCCCccCCccCchhhhhhhcCHHHHHHH
Q 002073 502 VLNPMAAMFGGIVGQEVVKACSGKF------HPLY--QFFYFDSVESLPTEPLDSTEFKPINSRYDAQISVFGAKLQKKL 573 (972)
Q Consensus 502 el~PvaA~iGGiaAQEVIKaiTgKf------~PI~--q~~yfD~~e~Lp~~~~~~~~~~~~~~RYdrqi~l~G~~~q~kL 573 (972)
.+.-|-|..|+.+ .+|.+++-. .|-. -.+.||.-++.|..-++...+ ..-|-+.- ...+.....+.
T Consensus 54 ~~~~mpa~~~~~~---g~K~v~~~p~N~~~glp~~~~~~~L~d~~tG~p~a~~d~~~l--T~~RTaa~-s~laa~~la~~ 127 (350)
T 1x7d_A 54 VIELMPVADKSRY---AFKYVNGHPANTARNLHTVMAFGVLADVDSGYPVLLSELTIA--TALRTAAT-SLMAAQALARP 127 (350)
T ss_dssp EEEEEEEECSSEE---EEEEEEECGGGGGGTCCSEEEEEEEEETTTCCEEEEEECHHH--HHHHHHHH-HHHHHHHHSCT
T ss_pred EEEEEeccCCCcE---EEEEEEecCCcccCCCccEEEEEEEEECCCCCEEEEEcCCEE--EeehhhHH-HHHHHHHhccc
Confidence 3444555556543 367766522 2333 245577766665422211110 11222221 11222222233
Q ss_pred hcCcEEEEcCCcchHHHHHHHHH-ccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCcEE
Q 002073 574 EDAKVFIVGSGALGCEFLKNVAL-MGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNI 652 (972)
Q Consensus 574 ~~~kVlIVGaGgiG~e~lknLa~-~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~~I 652 (972)
...++.|||+|+.|..+++.|.. .++ .+++|.|.+ ..|++.+++.+... +++.+
T Consensus 128 ~~~~v~iIGaG~~a~~~a~al~~~~~~-----~~V~V~~r~-------------------~~~a~~la~~~~~~-~g~~~ 182 (350)
T 1x7d_A 128 NARKMALIGNGAQSEFQALAFHKHLGI-----EEIVAYDTD-------------------PLATAKLIANLKEY-SGLTI 182 (350)
T ss_dssp TCCEEEEECCSTTHHHHHHHHHHHSCC-----CEEEEECSS-------------------HHHHHHHHHHHTTC-TTCEE
T ss_pred cCCeEEEECCcHHHHHHHHHHHHhCCC-----cEEEEEcCC-------------------HHHHHHHHHHHHhc-cCceE
Confidence 56789999999999999998864 466 788888643 24666666665432 34444
Q ss_pred EEeecccCCCcccccchhccCCCcEEEEccCC
Q 002073 653 EALQNRVGPETENVFDDTFWENITCVINALDN 684 (972)
Q Consensus 653 ~~~~~~v~~~~e~i~~~~f~~~~DvVi~alDn 684 (972)
..+. +. .+..+++|+||+|+-+
T Consensus 183 ~~~~-----~~-----~eav~~aDiVi~aTps 204 (350)
T 1x7d_A 183 RRAS-----SV-----AEAVKGVDIITTVTAD 204 (350)
T ss_dssp EECS-----SH-----HHHHTTCSEEEECCCC
T ss_pred EEeC-----CH-----HHHHhcCCEEEEeccC
Confidence 3321 11 2345689999999854
No 227
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=88.10 E-value=0.54 Score=48.79 Aligned_cols=35 Identities=20% Similarity=0.352 Sum_probs=29.7
Q ss_pred HhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 573 LEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 573 L~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
+++++++|.|+ |+||.++++.|+..|. +++++|.+
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~~G~------~v~~~~r~ 38 (247)
T 3lyl_A 3 LNEKVALVTGASRGIGFEVAHALASKGA------TVVGTATS 38 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC------EEEEEeCC
Confidence 56788999995 8899999999999998 78887653
No 228
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=88.09 E-value=0.95 Score=47.97 Aligned_cols=34 Identities=32% Similarity=0.347 Sum_probs=31.1
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCC
Q 002073 176 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 211 (972)
Q Consensus 176 L~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d 211 (972)
+++ +|+|+|+|++|..+++.|...|+ +++++|.+
T Consensus 115 l~~-~v~iiG~G~~g~~~a~~l~~~g~-~v~v~~r~ 148 (263)
T 2d5c_A 115 LKG-PALVLGAGGAGRAVAFALREAGL-EVWVWNRT 148 (263)
T ss_dssp CCS-CEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred CCC-eEEEECCcHHHHHHHHHHHHCCC-EEEEEECC
Confidence 667 99999999999999999999998 89999854
No 229
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=88.07 E-value=0.74 Score=49.75 Aligned_cols=83 Identities=14% Similarity=0.186 Sum_probs=51.5
Q ss_pred HhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCcE
Q 002073 573 LEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLN 651 (972)
Q Consensus 573 L~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~~ 651 (972)
+.+++++|.|+ ||||.++++.|+..|. +++++|.+. .+.+.+++.+..... +
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~G~------~V~~~~r~~-------------------~~~~~~~~~l~~~~~--~ 81 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARRGA------RLVLSDVDQ-------------------PALEQAVNGLRGQGF--D 81 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESCH-------------------HHHHHHHHHHHHTTC--C
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC------EEEEEECCH-------------------HHHHHHHHHHHhcCC--c
Confidence 56789999996 8899999999999998 788876532 344445555554443 4
Q ss_pred EEEeecccCCCcc--cccc--hhccCCCcEEEEcc
Q 002073 652 IEALQNRVGPETE--NVFD--DTFWENITCVINAL 682 (972)
Q Consensus 652 I~~~~~~v~~~~e--~i~~--~~f~~~~DvVi~al 682 (972)
+..+...++.... ..+. .+.+...|+||++.
T Consensus 82 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lvnnA 116 (301)
T 3tjr_A 82 AHGVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNA 116 (301)
T ss_dssp EEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEECC
T ss_pred eEEEEccCCCHHHHHHHHHHHHHhCCCCCEEEECC
Confidence 4555555543211 1111 01124678887764
No 230
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=88.05 E-value=1.3 Score=48.44 Aligned_cols=72 Identities=24% Similarity=0.258 Sum_probs=52.2
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcC-CEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhc---CCCEEEEee
Q 002073 179 SNILVSGMQGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELN---NAVVLSTLT 254 (972)
Q Consensus 179 s~VlIvG~gGlG~EiaKNLvLaGV-g~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLN---p~V~V~~~~ 254 (972)
.+|.|+|+|.+|..++-.|+..|. ++|.|+|-+ ..|++..+..|.... ..++++.
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~-------------------~~k~~g~a~dl~~~~~~~~~~~v~~-- 59 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLD-------------------RKLAQAHAEDILHATPFAHPVWVWA-- 59 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS-------------------HHHHHHHHHHHHTTGGGSCCCEEEE--
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC-------------------hhHHHHHHHHHHHhHhhcCCeEEEE--
Confidence 379999999999999999998874 679998842 235555555555543 3556664
Q ss_pred cCCChhhhcCCceEEEcCC
Q 002073 255 SKLTKEQLSDFQAVVFTDI 273 (972)
Q Consensus 255 ~~l~~e~l~~fdvVV~~~~ 273 (972)
+ +.+.+++.|+||.+..
T Consensus 60 ~--~~~a~~~aD~Vii~ag 76 (310)
T 2xxj_A 60 G--SYGDLEGARAVVLAAG 76 (310)
T ss_dssp C--CGGGGTTEEEEEECCC
T ss_pred C--CHHHhCCCCEEEECCC
Confidence 3 3556889999999754
No 231
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=88.00 E-value=2.5 Score=46.06 Aligned_cols=109 Identities=11% Similarity=0.082 Sum_probs=66.0
Q ss_pred hhcCeEEEEcC-ChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHh-cCCCEEEEe
Q 002073 176 LFASNILVSGM-QGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQEL-NNAVVLSTL 253 (972)
Q Consensus 176 L~~s~VlIvG~-gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eL-Np~V~V~~~ 253 (972)
|...+|||.|+ |++|..+++.|...|. +|+++|...-. ...+.+.+.+.+... .+ .++.+
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~---------------~~~~~~~~~~~~~~~~~~--~~~~~ 86 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLKLDQ-KVVGLDNFATG---------------HQRNLDEVRSLVSEKQWS--NFKFI 86 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSC---------------CHHHHHHHHHHSCHHHHT--TEEEE
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCcc---------------chhhHHHHhhhcccccCC--ceEEE
Confidence 56679999997 9999999999999995 78887753210 001122222221111 12 35555
Q ss_pred ecCCCh-----hhhcCCceEEEcCCC---------HH--------HHHHHHHHHHhcCCCc-eeEEeeecceeE
Q 002073 254 TSKLTK-----EQLSDFQAVVFTDIS---------LD--------KAIEFDDFCHNHQPAI-SFIKAEVRGLFG 304 (972)
Q Consensus 254 ~~~l~~-----e~l~~fdvVV~~~~~---------~~--------~~~~ln~~c~~~~~~I-pfI~a~~~G~~G 304 (972)
..++++ +.+.+.|+||.+... .. ....+-+.|++.+ + .||.+++.+.+|
T Consensus 87 ~~Dl~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~--~~~~v~~SS~~~~~ 158 (352)
T 1sb8_A 87 QGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAK--VQSFTYAASSSTYG 158 (352)
T ss_dssp ECCTTSHHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT--CSEEEEEEEGGGGT
T ss_pred ECCCCCHHHHHHHhcCCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEeccHHhcC
Confidence 566643 356788999976531 11 1234556777776 5 588888776654
No 232
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=88.00 E-value=1.2 Score=48.82 Aligned_cols=39 Identities=23% Similarity=0.251 Sum_probs=28.5
Q ss_pred HHHhhcCeEEEEcC-ChHHHHHHHHHHHhcCCEEEEEeCC
Q 002073 173 MRRLFASNILVSGM-QGLGAEIAKNLILAGVKSVTLHDEG 211 (972)
Q Consensus 173 q~kL~~s~VlIvG~-gGlG~EiaKNLvLaGVg~itLvD~d 211 (972)
|..+.+.+|||.|+ |++|..+++.|...|...|++++..
T Consensus 41 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~ 80 (357)
T 2x6t_A 41 GSGIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNL 80 (357)
T ss_dssp -------CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECC
T ss_pred cccCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecC
Confidence 44566778999997 9999999999999996678888764
No 233
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=87.99 E-value=2.6 Score=46.62 Aligned_cols=102 Identities=13% Similarity=0.171 Sum_probs=60.2
Q ss_pred hhcCeEEEEcC-ChHHHHHHHHHHHhcCCEEEEEeCCccCc-cCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEe
Q 002073 176 LFASNILVSGM-QGLGAEIAKNLILAGVKSVTLHDEGTVEL-WDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTL 253 (972)
Q Consensus 176 L~~s~VlIvG~-gGlG~EiaKNLvLaGVg~itLvD~d~V~~-~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~ 253 (972)
++..+|||.|. |.+|..+++.|...|..+|+++|...-.. ..+. ..-.++.+
T Consensus 30 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~--------------------------~~~~v~~~ 83 (377)
T 2q1s_A 30 LANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVP--------------------------DHPAVRFS 83 (377)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSC--------------------------CCTTEEEE
T ss_pred hCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhcc--------------------------CCCceEEE
Confidence 45578999995 89999999999999955888887543211 0010 01134444
Q ss_pred ecCCCh-----hhhcCCceEEEcCCC--H---------------HHHHHHHHHHHhc-CCCc-eeEEeeecceeEE
Q 002073 254 TSKLTK-----EQLSDFQAVVFTDIS--L---------------DKAIEFDDFCHNH-QPAI-SFIKAEVRGLFGS 305 (972)
Q Consensus 254 ~~~l~~-----e~l~~fdvVV~~~~~--~---------------~~~~~ln~~c~~~-~~~I-pfI~a~~~G~~G~ 305 (972)
..++++ +.++++|+||.+... . .....+-+.|++. + + .||..++.+.+|.
T Consensus 84 ~~Dl~d~~~l~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~--~~~~V~~SS~~vyg~ 157 (377)
T 2q1s_A 84 ETSITDDALLASLQDEYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKR--LKKVVYSAAGCSIAE 157 (377)
T ss_dssp CSCTTCHHHHHHCCSCCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSS--CCEEEEEEEC-----
T ss_pred ECCCCCHHHHHHHhhCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC--CCeEEEeCCHHHcCC
Confidence 445432 245578888876431 1 1123455677777 5 4 7888888766653
No 234
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=87.95 E-value=1.2 Score=48.86 Aligned_cols=32 Identities=19% Similarity=0.335 Sum_probs=28.9
Q ss_pred cEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 577 KVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 577 kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
||.|||+|.+|..++..|++.|+ ++|+++|-|
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l-----~el~L~Di~ 32 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGY-----DDLLLIART 32 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTC-----SCEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHhCCC-----CEEEEEcCC
Confidence 68999999999999999998888 689999865
No 235
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=87.93 E-value=4.2 Score=45.68 Aligned_cols=105 Identities=10% Similarity=0.091 Sum_probs=69.8
Q ss_pred HHhhcCeEEEEc-CChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcC--CCEE
Q 002073 174 RRLFASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNN--AVVL 250 (972)
Q Consensus 174 ~kL~~s~VlIvG-~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp--~V~V 250 (972)
..|++.+|||.| .|++|+++++.|+..|...++++|.. .++.....+.|.+..+ ...+
T Consensus 31 ~~~~~k~vLVTGatG~IG~~l~~~L~~~g~~~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~v 91 (399)
T 3nzo_A 31 SVVSQSRFLVLGGAGSIGQAVTKEIFKRNPQKLHVVDIS-------------------ENNMVELVRDIRSSFGYINGDF 91 (399)
T ss_dssp HHHHTCEEEEETTTSHHHHHHHHHHHTTCCSEEEEECSC-------------------HHHHHHHHHHHHHHTCCCSSEE
T ss_pred HHhCCCEEEEEcCChHHHHHHHHHHHHCCCCEEEEEECC-------------------cchHHHHHHHHHHhcCCCCCcE
Confidence 447789999999 58899999999999998889988742 2244445555666554 2567
Q ss_pred EEeecCCChh-----hh--cCCceEEEcCC--------CHH-----------HHHHHHHHHHhcCCCc-eeEEeee
Q 002073 251 STLTSKLTKE-----QL--SDFQAVVFTDI--------SLD-----------KAIEFDDFCHNHQPAI-SFIKAEV 299 (972)
Q Consensus 251 ~~~~~~l~~e-----~l--~~fdvVV~~~~--------~~~-----------~~~~ln~~c~~~~~~I-pfI~a~~ 299 (972)
..+..++++. .+ .+.|+||.+.. +.. ....+-+.|++++ + .||..++
T Consensus 92 ~~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~g--v~r~V~iSS 165 (399)
T 3nzo_A 92 QTFALDIGSIEYDAFIKADGQYDYVLNLSALKHVRSEKDPFTLMRMIDVNVFNTDKTIQQSIDAG--AKKYFCVST 165 (399)
T ss_dssp EEECCCTTSHHHHHHHHHCCCCSEEEECCCCCCGGGGSSHHHHHHHHHHHTHHHHHHHHHHHHTT--CSEEEEECC
T ss_pred EEEEEeCCCHHHHHHHHHhCCCCEEEECCCcCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEEeC
Confidence 7777776542 22 47898886542 111 1234567788887 4 4665554
No 236
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=87.90 E-value=0.74 Score=48.33 Aligned_cols=35 Identities=23% Similarity=0.367 Sum_probs=30.2
Q ss_pred HhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 573 LEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 573 L~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
+.+++++|.|+ ||||.++++.|+..|. +++++|.+
T Consensus 5 ~~~k~vlVTGas~GIG~aia~~l~~~G~------~V~~~~r~ 40 (252)
T 3h7a_A 5 PRNATVAVIGAGDYIGAEIAKKFAAEGF------TVFAGRRN 40 (252)
T ss_dssp CCSCEEEEECCSSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC------EEEEEeCC
Confidence 56788999995 7899999999999998 78888754
No 237
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=87.88 E-value=1.4 Score=46.48 Aligned_cols=63 Identities=21% Similarity=0.416 Sum_probs=47.3
Q ss_pred hhcCeEEEEc-CChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEee
Q 002073 176 LFASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLT 254 (972)
Q Consensus 176 L~~s~VlIvG-~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~ 254 (972)
|++++|+|.| .||+|.++|+.|+..|. +|.++|.+ ..+.+...+.+.+..+...+..+.
T Consensus 8 l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~ 67 (267)
T 3t4x_A 8 LKGKTALVTGSTAGIGKAIATSLVAEGA-NVLINGRR-------------------EENVNETIKEIRAQYPDAILQPVV 67 (267)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESS-------------------HHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCC-------------------HHHHHHHHHHHHhhCCCceEEEEe
Confidence 5677888888 58999999999999997 68877642 235566677788877777777666
Q ss_pred cCCC
Q 002073 255 SKLT 258 (972)
Q Consensus 255 ~~l~ 258 (972)
.+++
T Consensus 68 ~D~~ 71 (267)
T 3t4x_A 68 ADLG 71 (267)
T ss_dssp CCTT
T ss_pred cCCC
Confidence 5554
No 238
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=87.81 E-value=1.8 Score=45.74 Aligned_cols=35 Identities=31% Similarity=0.453 Sum_probs=29.7
Q ss_pred HhhcCeEEEEc-CChHHHHHHHHHHHhcCCEEEEEeC
Q 002073 175 RLFASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDE 210 (972)
Q Consensus 175 kL~~s~VlIvG-~gGlG~EiaKNLvLaGVg~itLvD~ 210 (972)
.|++++|+|.| .||+|.++++.|+..|. +|+++|.
T Consensus 29 ~l~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r 64 (279)
T 1xg5_A 29 RWRDRLALVTGASGGIGAAVARALVQQGL-KVVGCAR 64 (279)
T ss_dssp GGTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEEC
Confidence 46778999997 68999999999999997 6777764
No 239
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=87.77 E-value=0.75 Score=51.45 Aligned_cols=93 Identities=16% Similarity=0.140 Sum_probs=61.0
Q ss_pred CcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCcEEEE
Q 002073 576 AKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEA 654 (972)
Q Consensus 576 ~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~~I~~ 654 (972)
.||.|||+ |.+|.|+++.|...-. -+|+.+. ..+..|+. +....|..+
T Consensus 14 ~~V~IvGAtG~vG~ellrlL~~hP~-----~el~~l~---------------S~~~aG~~--------~~~~~p~~~--- 62 (351)
T 1vkn_A 14 IRAGIIGATGYTGLELVRLLKNHPE-----AKITYLS---------------SRTYAGKK--------LEEIFPSTL--- 62 (351)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHCTT-----EEEEEEE---------------CSTTTTSB--------HHHHCGGGC---
T ss_pred eEEEEECCCCHHHHHHHHHHHcCCC-----cEEEEEe---------------CcccccCC--------hHHhChhhc---
Confidence 47999996 8899999999997644 5666542 22345544 233345443
Q ss_pred eecccCCCcccccchhccCCCcEEEEccCChHHHHHHhhhhhccccceEecc
Q 002073 655 LQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLESG 706 (972)
Q Consensus 655 ~~~~v~~~~e~i~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~~~kPli~sg 706 (972)
..-.+.+.+ .++++.++|+||.|+..-.++.+.... .+..+|+.+
T Consensus 63 ~~l~~~~~~----~~~~~~~~Dvvf~alp~~~s~~~~~~~---~g~~VIDlS 107 (351)
T 1vkn_A 63 ENSILSEFD----PEKVSKNCDVLFTALPAGASYDLVREL---KGVKIIDLG 107 (351)
T ss_dssp CCCBCBCCC----HHHHHHHCSEEEECCSTTHHHHHHTTC---CSCEEEESS
T ss_pred cCceEEeCC----HHHhhcCCCEEEECCCcHHHHHHHHHh---CCCEEEECC
Confidence 111111111 134457899999999999999998877 577788644
No 240
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=87.73 E-value=2.3 Score=45.90 Aligned_cols=95 Identities=16% Similarity=0.187 Sum_probs=58.3
Q ss_pred eEEEEc-CChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEeecCCC
Q 002073 180 NILVSG-MQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKLT 258 (972)
Q Consensus 180 ~VlIvG-~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~~~l~ 258 (972)
+|||.| .|++|..+++.|...|. +|+++|.+.-....+.. + .++.+..+++
T Consensus 15 ~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~-------------------------~--~~~~~~~Dl~ 66 (342)
T 2x4g_A 15 KYAVLGATGLLGHHAARAIRAAGH-DLVLIHRPSSQIQRLAY-------------------------L--EPECRVAEML 66 (342)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTC-EEEEEECTTSCGGGGGG-------------------------G--CCEEEECCTT
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC-EEEEEecChHhhhhhcc-------------------------C--CeEEEEecCC
Confidence 799999 59999999999999995 78888764322111110 1 2333344443
Q ss_pred h-----hhhcCCceEEEcCCC---------------HHHHHHHHHHHHhcCCCc-eeEEeeecceeE
Q 002073 259 K-----EQLSDFQAVVFTDIS---------------LDKAIEFDDFCHNHQPAI-SFIKAEVRGLFG 304 (972)
Q Consensus 259 ~-----e~l~~fdvVV~~~~~---------------~~~~~~ln~~c~~~~~~I-pfI~a~~~G~~G 304 (972)
+ +.+++.|+||.+... ......+-+.|++.+ + .||..++.+.+|
T Consensus 67 d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~--~~~~v~~SS~~~~~ 131 (342)
T 2x4g_A 67 DHAGLERALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQAR--VPRILYVGSAYAMP 131 (342)
T ss_dssp CHHHHHHHTTTCSEEEEC------------CHHHHHHHHHHHHHHHHHHHT--CSCEEEECCGGGSC
T ss_pred CHHHHHHHHcCCCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcC--CCeEEEECCHHhhC
Confidence 2 245567777765421 112345667788776 4 688888777655
No 241
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=87.70 E-value=0.75 Score=53.64 Aligned_cols=118 Identities=13% Similarity=0.107 Sum_probs=66.4
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHh-cCCCEEEEeecC
Q 002073 178 ASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQEL-NNAVVLSTLTSK 256 (972)
Q Consensus 178 ~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eL-Np~V~V~~~~~~ 256 (972)
..+|.|||+|.+|..+|++|+..|. .|+++|.+.-....+...-. ...+-.-+....+.++.+ .+++-+......
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~g~---~g~~i~~~~s~~e~v~~l~~aDvVil~Vp~~ 79 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGF-VVCAFNRTVSKVDDFLANEA---KGTKVVGAQSLKEMVSKLKKPRRIILLVKAG 79 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSTHHHHHHHHTTT---TTSSCEECSSHHHHHHTBCSSCEEEECSCSS
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhccc---CCCceeccCCHHHHHhhccCCCEEEEecCCh
Confidence 4689999999999999999999997 79999876533222211100 000000001111122222 345444444332
Q ss_pred -CCh-------hhhcCCceEEEcCC-CHHHHHHHHHHHHhcCCCceeEEeeecc
Q 002073 257 -LTK-------EQLSDFQAVVFTDI-SLDKAIEFDDFCHNHQPAISFIKAEVRG 301 (972)
Q Consensus 257 -l~~-------e~l~~fdvVV~~~~-~~~~~~~ln~~c~~~~~~IpfI~a~~~G 301 (972)
..+ ..++.-++||++.. ......++.+.+.+.+ +.|+.+.+.|
T Consensus 80 ~~v~~vl~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~G--i~fvd~pVsG 131 (484)
T 4gwg_A 80 QAVDDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKG--ILFVGSGVSG 131 (484)
T ss_dssp HHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTT--CEEEEEEEES
T ss_pred HHHHHHHHHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhc--cccccCCccC
Confidence 111 13445578887654 4445556667777888 8888776554
No 242
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=87.70 E-value=0.51 Score=49.64 Aligned_cols=83 Identities=22% Similarity=0.282 Sum_probs=51.4
Q ss_pred HhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCcE
Q 002073 573 LEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLN 651 (972)
Q Consensus 573 L~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~~ 651 (972)
|.+++++|.|+ ||||.++++.|+..|. +++++|.+. .+.+.+++.+.+..+ +
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~~-------------------~~~~~~~~~~~~~~~--~ 62 (256)
T 3gaf_A 10 LNDAVAIVTGAAAGIGRAIAGTFAKAGA------SVVVTDLKS-------------------EGAEAVAAAIRQAGG--K 62 (256)
T ss_dssp CTTCEEEECSCSSHHHHHHHHHHHHHTC------EEEEEESSH-------------------HHHHHHHHHHHHTTC--C
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEeCCH-------------------HHHHHHHHHHHhcCC--c
Confidence 56788999995 8899999999999998 788887532 234455555655443 4
Q ss_pred EEEeecccCCCcc--cccc--hhccCCCcEEEEcc
Q 002073 652 IEALQNRVGPETE--NVFD--DTFWENITCVINAL 682 (972)
Q Consensus 652 I~~~~~~v~~~~e--~i~~--~~f~~~~DvVi~al 682 (972)
+..+...+..... ..+. .+-+...|++|++.
T Consensus 63 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nA 97 (256)
T 3gaf_A 63 AIGLECNVTDEQHREAVIKAALDQFGKITVLVNNA 97 (256)
T ss_dssp EEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 4455555543211 1111 01234677777753
No 243
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=87.68 E-value=1.5 Score=45.86 Aligned_cols=63 Identities=22% Similarity=0.231 Sum_probs=43.9
Q ss_pred HhhcCeEEEEc-CChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCC-CEEEE
Q 002073 175 RLFASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNA-VVLST 252 (972)
Q Consensus 175 kL~~s~VlIvG-~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~-V~V~~ 252 (972)
.++++.|+|.| .||+|.++|+.|+..|. +|.++|.+ ..+++.+.+.+.+.++. ..+..
T Consensus 4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~-------------------~~~~~~~~~~~~~~~~~~~~~~~ 63 (250)
T 3nyw_A 4 EKQKGLAIITGASQGIGAVIAAGLATDGY-RVVLIARS-------------------KQNLEKVHDEIMRSNKHVQEPIV 63 (250)
T ss_dssp -CCCCEEEEESTTSHHHHHHHHHHHHHTC-EEEEEESC-------------------HHHHHHHHHHHHHHCTTSCCCEE
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECC-------------------HHHHHHHHHHHHHhccccCcceE
Confidence 35677899997 58999999999999998 78887742 23556666777776654 34444
Q ss_pred eecCC
Q 002073 253 LTSKL 257 (972)
Q Consensus 253 ~~~~l 257 (972)
+..++
T Consensus 64 ~~~Dv 68 (250)
T 3nyw_A 64 LPLDI 68 (250)
T ss_dssp EECCT
T ss_pred EeccC
Confidence 43333
No 244
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=87.67 E-value=0.79 Score=48.34 Aligned_cols=36 Identities=31% Similarity=0.406 Sum_probs=30.8
Q ss_pred HHhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 572 KLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 572 kL~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
.|.+++++|.|+ |+||.++++.|+..|. +++++|.+
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~------~V~~~~r~ 44 (264)
T 3ucx_A 8 LLTDKVVVISGVGPALGTTLARRCAEQGA------DLVLAART 44 (264)
T ss_dssp TTTTCEEEEESCCTTHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CcCCcEEEEECCCcHHHHHHHHHHHHCcC------EEEEEeCC
Confidence 467888999996 7899999999999998 78888753
No 245
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=87.63 E-value=0.96 Score=49.19 Aligned_cols=38 Identities=18% Similarity=0.252 Sum_probs=32.5
Q ss_pred HhhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCcc
Q 002073 175 RLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTV 213 (972)
Q Consensus 175 kL~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V 213 (972)
.....+|.|||+|.+|..+|++|+..|. .|+++|.+.-
T Consensus 18 ~~~m~~I~iIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~ 55 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMGKAMSMNLLKNGF-KVTVWNRTLS 55 (310)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSGG
T ss_pred cccCCEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHH
Confidence 3344689999999999999999999997 8999987653
No 246
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=87.63 E-value=0.92 Score=53.51 Aligned_cols=85 Identities=14% Similarity=0.148 Sum_probs=63.2
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEeecCC-
Q 002073 179 SNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKL- 257 (972)
Q Consensus 179 s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~~~l- 257 (972)
.+|+|+|+|-+|..+|+.|...|. .++++|.+.-....+. .+..++.
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~-~v~vid~d~~~~~~~~-------------------------------~~i~gD~t 396 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPV-PFILIDRQESPVCNDH-------------------------------VVVYGDAT 396 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC-CEEEEESSCCSSCCSS-------------------------------CEEESCSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCC-CEEEEECChHHHhhcC-------------------------------CEEEeCCC
Confidence 789999999999999999999998 6899997764333221 1222222
Q ss_pred -----ChhhhcCCceEEEcCCCHHHHHHHHHHHHhcCCCceeE
Q 002073 258 -----TKEQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFI 295 (972)
Q Consensus 258 -----~~e~l~~fdvVV~~~~~~~~~~~ln~~c~~~~~~IpfI 295 (972)
.+.-+.++|.||++..+.+....+...+++.++++..|
T Consensus 397 ~~~~L~~agi~~ad~vi~~~~~d~~ni~~~~~ak~l~~~~~ii 439 (565)
T 4gx0_A 397 VGQTLRQAGIDRASGIIVTTNDDSTNIFLTLACRHLHSHIRIV 439 (565)
T ss_dssp SSTHHHHHTTTSCSEEEECCSCHHHHHHHHHHHHHHCSSSEEE
T ss_pred CHHHHHhcCccccCEEEEECCCchHHHHHHHHHHHHCCCCEEE
Confidence 22346789999999988888888889999998544444
No 247
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=87.56 E-value=1.6 Score=50.67 Aligned_cols=33 Identities=27% Similarity=0.367 Sum_probs=28.9
Q ss_pred hcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeC
Q 002073 177 FASNILVSGMQGLGAEIAKNLILAGVKSVTLHDE 210 (972)
Q Consensus 177 ~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~ 210 (972)
...+|.|||+|.+|..+|.+|+..|. .|+++|.
T Consensus 4 ~~~~IgvIG~G~mG~~lA~~L~~~G~-~V~v~dr 36 (474)
T 2iz1_A 4 AQANFGVVGMAVMGKNLALNVESRGY-TVAIYNR 36 (474)
T ss_dssp TTBSEEEECCSHHHHHHHHHHHHTTC-CEEEECS
T ss_pred CCCcEEEEeeHHHHHHHHHHHHhCCC-EEEEEcC
Confidence 34689999999999999999999997 5888874
No 248
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=87.55 E-value=0.86 Score=48.55 Aligned_cols=36 Identities=28% Similarity=0.493 Sum_probs=30.7
Q ss_pred HHhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 572 KLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 572 kL~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
.+.+++|+|.|+ |+||.++++.|+..|. +++++|.+
T Consensus 25 ~~~~k~vlITGasggIG~~la~~l~~~G~------~V~~~~r~ 61 (286)
T 1xu9_A 25 MLQGKKVIVTGASKGIGREMAYHLAKMGA------HVVVTARS 61 (286)
T ss_dssp GGTTCEEEESSCSSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred hcCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEECC
Confidence 356789999996 8999999999999997 78888754
No 249
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=87.53 E-value=0.93 Score=48.17 Aligned_cols=97 Identities=11% Similarity=0.091 Sum_probs=56.0
Q ss_pred HHhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCc
Q 002073 572 KLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRL 650 (972)
Q Consensus 572 kL~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~ 650 (972)
.|++++++|.|+ ||||.++++.|+..|. +++++|.+.-....+.. .. -...+.+.+++.+....+
T Consensus 12 ~l~gk~~lVTGas~gIG~a~a~~la~~G~------~V~~~~r~~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~-- 77 (280)
T 3pgx_A 12 SLQGRVAFITGAARGQGRSHAVRLAAEGA------DIIACDICAPVSASVTY----AP--ASPEDLDETARLVEDQGR-- 77 (280)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC------EEEEEECCSCCCTTCCS----CC--CCHHHHHHHHHHHHTTTC--
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEeccccccccccc----cc--cCHHHHHHHHHHHHhcCC--
Confidence 467889999995 8899999999999998 88998865321111111 11 112344555555655443
Q ss_pred EEEEeecccCCCcc--cccc--hhccCCCcEEEEcc
Q 002073 651 NIEALQNRVGPETE--NVFD--DTFWENITCVINAL 682 (972)
Q Consensus 651 ~I~~~~~~v~~~~e--~i~~--~~f~~~~DvVi~al 682 (972)
++..+...+..... ..+. .+-+...|++|++.
T Consensus 78 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnA 113 (280)
T 3pgx_A 78 KALTRVLDVRDDAALRELVADGMEQFGRLDVVVANA 113 (280)
T ss_dssp CEEEEECCTTCHHHHHHHHHHHHHHHCCCCEEEECC
T ss_pred eEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 45555555543211 1111 01234677777763
No 250
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=87.51 E-value=1 Score=49.43 Aligned_cols=35 Identities=23% Similarity=0.376 Sum_probs=29.8
Q ss_pred HhcCcEEEEcC-CcchHHHHHHHHH--ccccCCCCceEEEEcCC
Q 002073 573 LEDAKVFIVGS-GALGCEFLKNVAL--MGVSCGNQGKLTITDDD 613 (972)
Q Consensus 573 L~~~kVlIVGa-GgiG~e~lknLa~--~Gv~~~~~g~i~iiD~D 613 (972)
+..++|+|.|+ |.||..+++.|+. .|. +++++|..
T Consensus 8 ~~~~~vlVTGatG~IG~~l~~~L~~~~~g~------~V~~~~r~ 45 (362)
T 3sxp_A 8 LENQTILITGGAGFVGSNLAFHFQENHPKA------KVVVLDKF 45 (362)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHCTTS------EEEEEECC
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHhhCCCC------eEEEEECC
Confidence 45789999985 9999999999999 776 88888754
No 251
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=87.48 E-value=0.66 Score=49.11 Aligned_cols=35 Identities=23% Similarity=0.253 Sum_probs=30.1
Q ss_pred HhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 573 LEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 573 L~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
+.+++++|.|+ |+||.++++.|+..|. +++++|.+
T Consensus 29 l~~k~vlITGasggIG~~la~~L~~~G~------~V~~~~r~ 64 (272)
T 1yb1_A 29 VTGEIVLITGAGHGIGRLTAYEFAKLKS------KLVLWDIN 64 (272)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC------EEEEEEcC
Confidence 56789999995 8899999999999997 78888743
No 252
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=87.47 E-value=1 Score=48.71 Aligned_cols=34 Identities=32% Similarity=0.469 Sum_probs=29.7
Q ss_pred cCcEEEEc-CCcchHHHHHHHHHccccCCCCceEEEEcCCc
Q 002073 575 DAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDV 614 (972)
Q Consensus 575 ~~kVlIVG-aGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~ 614 (972)
..+|.||| +|.+|+.+++.|+..|. +++++|.+.
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~------~V~~~~~~~ 55 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGY------PISILDRED 55 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTC------CEEEECTTC
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCC------eEEEEECCc
Confidence 35899999 99999999999999997 788888653
No 253
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=87.44 E-value=1.2 Score=49.12 Aligned_cols=79 Identities=16% Similarity=0.139 Sum_probs=51.9
Q ss_pred HHhhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEe
Q 002073 174 RRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTL 253 (972)
Q Consensus 174 ~kL~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~ 253 (972)
..|...+|.|||+|.+|..+|++|...|+ .++++|.+.- ++ .+...+.. +.+ .
T Consensus 12 ~~l~~~~I~IIG~G~mG~alA~~L~~~G~-~V~~~~~~~~-------------------~~---~~~a~~~G--~~~--~ 64 (338)
T 1np3_A 12 SIIQGKKVAIIGYGSQGHAHACNLKDSGV-DVTVGLRSGS-------------------AT---VAKAEAHG--LKV--A 64 (338)
T ss_dssp HHHHTSCEEEECCSHHHHHHHHHHHHTTC-CEEEECCTTC-------------------HH---HHHHHHTT--CEE--E
T ss_pred chhcCCEEEEECchHHHHHHHHHHHHCcC-EEEEEECChH-------------------HH---HHHHHHCC--CEE--c
Confidence 35677899999999999999999999997 5777775321 11 11122222 222 1
Q ss_pred ecCCChhhhcCCceEEEcCCCHHHHHHHH
Q 002073 254 TSKLTKEQLSDFQAVVFTDISLDKAIEFD 282 (972)
Q Consensus 254 ~~~l~~e~l~~fdvVV~~~~~~~~~~~ln 282 (972)
+ .++.+.+.|+||+|..+......+.
T Consensus 65 --~-~~e~~~~aDvVilavp~~~~~~v~~ 90 (338)
T 1np3_A 65 --D-VKTAVAAADVVMILTPDEFQGRLYK 90 (338)
T ss_dssp --C-HHHHHHTCSEEEECSCHHHHHHHHH
T ss_pred --c-HHHHHhcCCEEEEeCCcHHHHHHHH
Confidence 1 1356778999999986655444444
No 254
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=87.38 E-value=3.7 Score=44.67 Aligned_cols=72 Identities=17% Similarity=0.102 Sum_probs=47.4
Q ss_pred eEEEEcCChHHHHHHHHHHHhc-CCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHH----hcCCCEEEEee
Q 002073 180 NILVSGMQGLGAEIAKNLILAG-VKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQE----LNNAVVLSTLT 254 (972)
Q Consensus 180 ~VlIvG~gGlG~EiaKNLvLaG-Vg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~e----LNp~V~V~~~~ 254 (972)
+|.|+|+|.+|..+|..|+..| ..+|+++|.+. .|++.....+.+ .....++....
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~-------------------~~~~~~~~~l~~~~~~~~~~~~i~~t~ 62 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE-------------------GIPQGKALDMYESGPVGLFDTKVTGSN 62 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS-------------------SHHHHHHHHHHTTHHHHTCCCEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh-------------------hHHHHHHHhHHhhhhcccCCcEEEECC
Confidence 7999999999999999999876 35799998642 122222212221 23344555433
Q ss_pred cCCChhhhcCCceEEEcCC
Q 002073 255 SKLTKEQLSDFQAVVFTDI 273 (972)
Q Consensus 255 ~~l~~e~l~~fdvVV~~~~ 273 (972)
+ . ++ +++.|+||.|..
T Consensus 63 d-~-~~-l~~aDvViiav~ 78 (310)
T 1guz_A 63 D-Y-AD-TANSDIVIITAG 78 (310)
T ss_dssp C-G-GG-GTTCSEEEECCS
T ss_pred C-H-HH-HCCCCEEEEeCC
Confidence 2 2 23 889999999863
No 255
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=87.37 E-value=3.6 Score=47.52 Aligned_cols=32 Identities=28% Similarity=0.395 Sum_probs=29.2
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCC
Q 002073 179 SNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 211 (972)
Q Consensus 179 s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d 211 (972)
.+|.|||+|.+|+-||.+|+.+|. .|+++|.+
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~-~V~l~D~~ 69 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGI-SVVAVESD 69 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTC-EEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEECC
Confidence 479999999999999999999997 79999854
No 256
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=87.36 E-value=1.3 Score=48.15 Aligned_cols=34 Identities=21% Similarity=0.190 Sum_probs=29.5
Q ss_pred CcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 576 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 576 ~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
.||.|+|+|.+|..++..|+..|.. ++++++|.+
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~----~~v~L~D~~ 34 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDV----DEIALVDIA 34 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCC----SEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCC----CeEEEEECC
Confidence 3799999999999999999999973 589999854
No 257
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=87.34 E-value=1.1 Score=47.75 Aligned_cols=65 Identities=12% Similarity=0.186 Sum_probs=44.5
Q ss_pred HHHhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCC
Q 002073 571 KKLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPR 649 (972)
Q Consensus 571 ~kL~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~ 649 (972)
..+.+++++|.|+ |+||.++++.|+..|. +++++|.+. .+.+.+++.+.+..+.
T Consensus 7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~------~V~~~~r~~-------------------~~~~~~~~~l~~~~~~ 61 (281)
T 3svt_A 7 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGA------SVMIVGRNP-------------------DKLAGAVQELEALGAN 61 (281)
T ss_dssp -CCTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESCH-------------------HHHHHHHHHHHTTCCS
T ss_pred cCcCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEeCCH-------------------HHHHHHHHHHHHhCCC
Confidence 3567889999995 8999999999999998 788887542 3344455555554432
Q ss_pred -cEEEEeecccC
Q 002073 650 -LNIEALQNRVG 660 (972)
Q Consensus 650 -~~I~~~~~~v~ 660 (972)
.++..+...++
T Consensus 62 ~~~~~~~~~Dv~ 73 (281)
T 3svt_A 62 GGAIRYEPTDIT 73 (281)
T ss_dssp SCEEEEEECCTT
T ss_pred CceEEEEeCCCC
Confidence 25555555554
No 258
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=87.31 E-value=0.99 Score=48.05 Aligned_cols=36 Identities=19% Similarity=0.286 Sum_probs=31.6
Q ss_pred HHhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 572 KLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 572 kL~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
+|.+++++|.|+ ||||.++++.|+..|. +++++|.+
T Consensus 8 ~l~~k~~lVTGas~gIG~aia~~la~~G~------~V~~~~~~ 44 (286)
T 3uve_A 8 RVEGKVAFVTGAARGQGRSHAVRLAQEGA------DIIAVDIC 44 (286)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC------EEEEEECC
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC------eEEEEecc
Confidence 467889999996 7899999999999998 89998865
No 259
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=87.30 E-value=0.87 Score=49.31 Aligned_cols=32 Identities=25% Similarity=0.449 Sum_probs=29.0
Q ss_pred CeEEEEc-CChHHHHHHHHHHHhcCCEEEEEeCC
Q 002073 179 SNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEG 211 (972)
Q Consensus 179 s~VlIvG-~gGlG~EiaKNLvLaGVg~itLvD~d 211 (972)
.+|.||| +|.+|..+|+.|..+|. .++++|.+
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~-~V~~~~~~ 54 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGY-PISILDRE 54 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTC-CEEEECTT
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCC-eEEEEECC
Confidence 5899999 99999999999999997 78898864
No 260
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=87.26 E-value=0.6 Score=49.26 Aligned_cols=34 Identities=24% Similarity=0.364 Sum_probs=28.9
Q ss_pred cCcEEEEc-CCcchHHHHHHHHHccccCCCCceEEEEcCCc
Q 002073 575 DAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDV 614 (972)
Q Consensus 575 ~~kVlIVG-aGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~ 614 (972)
.++|+|.| +|+||.++++.|+..|. +++++|.+.
T Consensus 3 ~k~vlVTGasg~IG~~la~~L~~~G~------~V~~~~r~~ 37 (267)
T 3rft_A 3 MKRLLVTGAAGQLGRVMRERLAPMAE------ILRLADLSP 37 (267)
T ss_dssp EEEEEEESTTSHHHHHHHHHTGGGEE------EEEEEESSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCC------EEEEEecCC
Confidence 45799999 58899999999999997 888887654
No 261
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=87.23 E-value=1.1 Score=47.45 Aligned_cols=101 Identities=17% Similarity=0.193 Sum_probs=64.4
Q ss_pred eEEEEcC-ChHHHHHHHHHHHh-cCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEeecCC
Q 002073 180 NILVSGM-QGLGAEIAKNLILA-GVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKL 257 (972)
Q Consensus 180 ~VlIvG~-gGlG~EiaKNLvLa-GVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~~~l 257 (972)
+|+|+|+ |.+|..+++.+... |..=+.++|.. +|+ +.+....++|-|..-.-..
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~---------------~dl---------~~~~~~~~DvvIDfT~p~a 57 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAG---------------DPL---------SLLTDGNTEVVIDFTHPDV 57 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTT---------------CCT---------HHHHHTTCCEEEECSCTTT
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccC---------------CCH---------HHHhccCCcEEEEccChHH
Confidence 7999997 99999999998765 77555567643 111 1122235666665443222
Q ss_pred Chhhh-----cCCceEEEcCC-CHHHHHHHHHHHHhc-CCCceeEEeeecceeEEE
Q 002073 258 TKEQL-----SDFQAVVFTDI-SLDKAIEFDDFCHNH-QPAISFIKAEVRGLFGSV 306 (972)
Q Consensus 258 ~~e~l-----~~fdvVV~~~~-~~~~~~~ln~~c~~~-~~~IpfI~a~~~G~~G~v 306 (972)
..+++ .+.++||.|+. +.+....|.++|++. + +|++.+..+++-..+
T Consensus 58 ~~~~~~~a~~~g~~~VigTTG~~~e~~~~l~~aa~~~~~--~~vv~a~N~siGv~l 111 (245)
T 1p9l_A 58 VMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPN--TSVLIAPNFAIGAVL 111 (245)
T ss_dssp HHHHHHHHHHTTCEEEECCCCCCHHHHHHHHHHHHTSTT--CEEEECSCCCHHHHH
T ss_pred HHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHHHHHhCCC--CCEEEECCccHHHHH
Confidence 22222 25678887654 566677888899876 7 888888777664433
No 262
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=87.22 E-value=0.67 Score=52.13 Aligned_cols=36 Identities=22% Similarity=0.221 Sum_probs=33.1
Q ss_pred HhhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCC
Q 002073 175 RLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 211 (972)
Q Consensus 175 kL~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d 211 (972)
.+..++|+|+|+|++|..+++.+...|. +|+++|..
T Consensus 165 ~l~g~~V~ViG~G~iG~~~a~~a~~~Ga-~V~~~d~~ 200 (377)
T 2vhw_A 165 GVEPADVVVIGAGTAGYNAARIANGMGA-TVTVLDIN 200 (377)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCC
Confidence 5889999999999999999999999999 89999853
No 263
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=87.18 E-value=1.1 Score=48.50 Aligned_cols=32 Identities=22% Similarity=0.395 Sum_probs=28.0
Q ss_pred CcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 576 AKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 576 ~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
.+|+|.|+ |.||+.+++.|+..|. +++++|.+
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g~------~V~~~~r~ 46 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAGH------DLVLIHRP 46 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTC------EEEEEECT
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC------EEEEEecC
Confidence 47999996 9999999999999986 88888764
No 264
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=87.11 E-value=1.6 Score=49.05 Aligned_cols=89 Identities=15% Similarity=0.161 Sum_probs=58.6
Q ss_pred HHHHHHhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhh
Q 002073 568 KLQKKLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSI 646 (972)
Q Consensus 568 ~~q~kL~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~i 646 (972)
.....+..++|+|.|+ |.||+++++.|+..|. .+++++|.+ ..+...+.+.+.+.
T Consensus 28 ~~~~~~~~k~vLVTGatG~IG~~l~~~L~~~g~-----~~V~~~~r~-------------------~~~~~~~~~~l~~~ 83 (399)
T 3nzo_A 28 ELQSVVSQSRFLVLGGAGSIGQAVTKEIFKRNP-----QKLHVVDIS-------------------ENNMVELVRDIRSS 83 (399)
T ss_dssp HHHHHHHTCEEEEETTTSHHHHHHHHHHHTTCC-----SEEEEECSC-------------------HHHHHHHHHHHHHH
T ss_pred HHHHHhCCCEEEEEcCChHHHHHHHHHHHHCCC-----CEEEEEECC-------------------cchHHHHHHHHHHh
Confidence 3445678899999995 7899999999999995 588888642 12333444455554
Q ss_pred CC--CcEEEEeecccCCCcccccchhc--cCCCcEEEEccC
Q 002073 647 NP--RLNIEALQNRVGPETENVFDDTF--WENITCVINALD 683 (972)
Q Consensus 647 nP--~~~I~~~~~~v~~~~e~i~~~~f--~~~~DvVi~alD 683 (972)
.+ ..+++.+...+.... . . ..+ ..++|+||++..
T Consensus 84 ~~~~~~~v~~~~~Dl~d~~-~-~-~~~~~~~~~D~Vih~Aa 121 (399)
T 3nzo_A 84 FGYINGDFQTFALDIGSIE-Y-D-AFIKADGQYDYVLNLSA 121 (399)
T ss_dssp TCCCSSEEEEECCCTTSHH-H-H-HHHHHCCCCSEEEECCC
T ss_pred cCCCCCcEEEEEEeCCCHH-H-H-HHHHHhCCCCEEEECCC
Confidence 44 246777776666422 1 1 112 258999998753
No 265
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=87.09 E-value=1.1 Score=46.19 Aligned_cols=31 Identities=19% Similarity=0.389 Sum_probs=27.0
Q ss_pred CcEEEEcCCcchHHHHHHHHHccccCCCCceEEE-EcC
Q 002073 576 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTI-TDD 612 (972)
Q Consensus 576 ~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~i-iD~ 612 (972)
.||.|||+|.+|..+++.|+..|. ++++ +|.
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~------~V~~v~~r 55 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQI------PAIIANSR 55 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTC------CEEEECTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC------EEEEEECC
Confidence 689999999999999999999987 6666 554
No 266
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=87.08 E-value=0.48 Score=47.27 Aligned_cols=33 Identities=30% Similarity=0.337 Sum_probs=29.9
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCC
Q 002073 178 ASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 211 (972)
Q Consensus 178 ~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d 211 (972)
+..|+|||+|..|..+|..|.+.|+ +++|+|..
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~-~V~v~Ek~ 34 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGH-QVHLFDKS 34 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECC
Confidence 3579999999999999999999999 79999954
No 267
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=87.06 E-value=2.9 Score=44.05 Aligned_cols=93 Identities=15% Similarity=0.166 Sum_probs=58.0
Q ss_pred eEEEEcC-ChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEeecCCC
Q 002073 180 NILVSGM-QGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKLT 258 (972)
Q Consensus 180 ~VlIvG~-gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~~~l~ 258 (972)
+|||.|. |++|..+++.|...+-.+|++++.+.-....+ ..+ .+++...+++
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~-------------------------~~~--~v~~~~~D~~ 54 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD-------------------------WRG--KVSVRQLDYF 54 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG-------------------------GBT--TBEEEECCTT
T ss_pred EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh-------------------------hhC--CCEEEEcCCC
Confidence 6999995 89999999998887334677766543211111 012 2344445553
Q ss_pred h-----hhhcCCceEEEcCCC-------HHHHHHHHHHHHhcCCCc-eeEEeeecc
Q 002073 259 K-----EQLSDFQAVVFTDIS-------LDKAIEFDDFCHNHQPAI-SFIKAEVRG 301 (972)
Q Consensus 259 ~-----e~l~~fdvVV~~~~~-------~~~~~~ln~~c~~~~~~I-pfI~a~~~G 301 (972)
+ ..+++.|+||.+... ......+-+.|++.+ + .||..++.|
T Consensus 55 d~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~g--v~~iv~~Ss~~ 108 (289)
T 3e48_A 55 NQESMVEAFKGMDTVVFIPSIIHPSFKRIPEVENLVYAAKQSG--VAHIIFIGYYA 108 (289)
T ss_dssp CHHHHHHHTTTCSEEEECCCCCCSHHHHHHHHHHHHHHHHHTT--CCEEEEEEESC
T ss_pred CHHHHHHHHhCCCEEEEeCCCCccchhhHHHHHHHHHHHHHcC--CCEEEEEcccC
Confidence 2 356788999887542 234456777888887 5 477777644
No 268
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=87.04 E-value=0.51 Score=49.47 Aligned_cols=35 Identities=11% Similarity=0.320 Sum_probs=28.2
Q ss_pred CcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcC
Q 002073 576 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDD 612 (972)
Q Consensus 576 ~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~ 612 (972)
.||.|||+|.+|+.+++.|+..|.. +..+++++|.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~--~~~~V~~~~r 37 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIV--SSNQIICSDL 37 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSS--CGGGEEEECS
T ss_pred CeEEEECccHHHHHHHHHHHhCCCC--CCCeEEEEeC
Confidence 6899999999999999999999851 1146777764
No 269
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=87.02 E-value=0.74 Score=49.13 Aligned_cols=84 Identities=13% Similarity=0.205 Sum_probs=49.3
Q ss_pred HHhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCc
Q 002073 572 KLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRL 650 (972)
Q Consensus 572 kL~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~ 650 (972)
-+..++++|.|+ ||||.++++.|+..|. +++++|.+ ..+.+.+++.+....+
T Consensus 21 m~~~k~~lVTGas~GIG~aia~~la~~G~------~V~~~~r~-------------------~~~~~~~~~~l~~~~~-- 73 (279)
T 3sju_A 21 MSRPQTAFVTGVSSGIGLAVARTLAARGI------AVYGCARD-------------------AKNVSAAVDGLRAAGH-- 73 (279)
T ss_dssp ----CEEEEESTTSHHHHHHHHHHHHTTC------EEEEEESC-------------------HHHHHHHHHHHHTTTC--
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCC------EEEEEeCC-------------------HHHHHHHHHHHHhcCC--
Confidence 356788999995 8899999999999998 78888744 2344555556655443
Q ss_pred EEEEeecccCCCcc--cccc--hhccCCCcEEEEcc
Q 002073 651 NIEALQNRVGPETE--NVFD--DTFWENITCVINAL 682 (972)
Q Consensus 651 ~I~~~~~~v~~~~e--~i~~--~~f~~~~DvVi~al 682 (972)
++..+...++.... ..+. .+-+...|++|++.
T Consensus 74 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nA 109 (279)
T 3sju_A 74 DVDGSSCDVTSTDEVHAAVAAAVERFGPIGILVNSA 109 (279)
T ss_dssp CEEEEECCTTCHHHHHHHHHHHHHHHCSCCEEEECC
T ss_pred cEEEEECCCCCHHHHHHHHHHHHHHcCCCcEEEECC
Confidence 44455555543211 1111 01134667777753
No 270
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=87.02 E-value=1.2 Score=47.89 Aligned_cols=34 Identities=21% Similarity=0.179 Sum_probs=30.8
Q ss_pred hhcCeEEEEc-CChHHHHHHHHHHHhcCCEEEEEeC
Q 002073 176 LFASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDE 210 (972)
Q Consensus 176 L~~s~VlIvG-~gGlG~EiaKNLvLaGVg~itLvD~ 210 (972)
+++++|+|.| .||+|..+++.|+..|.. |+++|.
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~-V~i~~R 151 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAE-VVLCGR 151 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCE-EEEEEC
Confidence 5678999999 999999999999999985 998874
No 271
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=87.01 E-value=0.51 Score=51.18 Aligned_cols=36 Identities=14% Similarity=0.084 Sum_probs=33.2
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCC
Q 002073 176 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 211 (972)
Q Consensus 176 L~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d 211 (972)
+.+++|+|+|+||.|..++..|...|+++|+|++.+
T Consensus 120 ~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt 155 (282)
T 3fbt_A 120 IKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRN 155 (282)
T ss_dssp CTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESC
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 568899999999999999999999999999998743
No 272
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=87.00 E-value=1.6 Score=47.53 Aligned_cols=34 Identities=32% Similarity=0.474 Sum_probs=29.9
Q ss_pred CcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 576 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 576 ~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
.||.|||+|.+|..++..|+..|.. ++++++|.|
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~----~eV~L~D~~ 34 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSC----SELVLVDRD 34 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCC----SEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCC----CEEEEEeCC
Confidence 3799999999999999999999862 689999865
No 273
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=86.93 E-value=1.6 Score=45.66 Aligned_cols=35 Identities=29% Similarity=0.480 Sum_probs=29.9
Q ss_pred HhhcCeEEEEcC-C-hHHHHHHHHHHHhcCCEEEEEeC
Q 002073 175 RLFASNILVSGM-Q-GLGAEIAKNLILAGVKSVTLHDE 210 (972)
Q Consensus 175 kL~~s~VlIvG~-g-GlG~EiaKNLvLaGVg~itLvD~ 210 (972)
.|++++|+|.|. | |+|.++|+.|+..|. +|.++|.
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~~G~-~V~~~~r 55 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALLEGA-DVVISDY 55 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHCCC-EEEEecC
Confidence 366789999998 6 899999999999997 5888774
No 274
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=86.92 E-value=0.76 Score=48.13 Aligned_cols=64 Identities=14% Similarity=0.191 Sum_probs=45.4
Q ss_pred HhcCcEEEEcC-CcchHHHHHHHHH---ccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCC
Q 002073 573 LEDAKVFIVGS-GALGCEFLKNVAL---MGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINP 648 (972)
Q Consensus 573 L~~~kVlIVGa-GgiG~e~lknLa~---~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP 648 (972)
|.+++++|.|+ ||||.++++.|+. .|. +++++|.+. .+.+.+++.+...+|
T Consensus 4 l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~------~V~~~~r~~-------------------~~~~~~~~~l~~~~~ 58 (259)
T 1oaa_A 4 LGCAVCVLTGASRGFGRALAPQLARLLSPGS------VMLVSARSE-------------------SMLRQLKEELGAQQP 58 (259)
T ss_dssp CBSEEEEESSCSSHHHHHHHHHHHTTBCTTC------EEEEEESCH-------------------HHHHHHHHHHHHHCT
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHhhcCCC------eEEEEeCCH-------------------HHHHHHHHHHHhhCC
Confidence 45677888885 8999999999999 787 788886432 234445556666666
Q ss_pred CcEEEEeecccCC
Q 002073 649 RLNIEALQNRVGP 661 (972)
Q Consensus 649 ~~~I~~~~~~v~~ 661 (972)
..++..+...++.
T Consensus 59 ~~~~~~~~~Dv~~ 71 (259)
T 1oaa_A 59 DLKVVLAAADLGT 71 (259)
T ss_dssp TSEEEEEECCTTS
T ss_pred CCeEEEEecCCCC
Confidence 6677777666653
No 275
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=86.91 E-value=1.3 Score=48.35 Aligned_cols=92 Identities=14% Similarity=0.102 Sum_probs=57.9
Q ss_pred hhcCeEEEEcC-ChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhc-CCCEEEEe
Q 002073 176 LFASNILVSGM-QGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELN-NAVVLSTL 253 (972)
Q Consensus 176 L~~s~VlIvG~-gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLN-p~V~V~~~ 253 (972)
|...+|||.|+ |.+|..+++.|...| ..|++++.+.-. ...++. .+.++. +. ++.+
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~---------------~~~~~~----~~~~l~~~~--v~~~ 65 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAH-RPTYILARPGPR---------------SPSKAK----IFKALEDKG--AIIV 65 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTT-CCEEEEECSSCC---------------CHHHHH----HHHHHHHTT--CEEE
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCC-CCEEEEECCCCC---------------ChhHHH----HHHHHHhCC--cEEE
Confidence 44678999998 899999999999999 467777653200 011222 222222 33 4455
Q ss_pred ecCCCh-----hhhc--CCceEEEcCC--CHHHHHHHHHHHHhcC
Q 002073 254 TSKLTK-----EQLS--DFQAVVFTDI--SLDKAIEFDDFCHNHQ 289 (972)
Q Consensus 254 ~~~l~~-----e~l~--~fdvVV~~~~--~~~~~~~ln~~c~~~~ 289 (972)
..++++ ..++ +.|+||.+.. +......+-+.|++.+
T Consensus 66 ~~Dl~d~~~l~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g 110 (346)
T 3i6i_A 66 YGLINEQEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVG 110 (346)
T ss_dssp ECCTTCHHHHHHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHC
T ss_pred EeecCCHHHHHHHHhhCCCCEEEECCchhhHHHHHHHHHHHHHcC
Confidence 556643 3566 8999998765 4555567778888776
No 276
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=86.91 E-value=0.91 Score=47.31 Aligned_cols=35 Identities=29% Similarity=0.307 Sum_probs=29.9
Q ss_pred HHhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcC
Q 002073 572 KLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDD 612 (972)
Q Consensus 572 kL~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~ 612 (972)
.+.+++|+|.|+ |+||.++++.|+..|. +++++|.
T Consensus 4 ~l~~k~vlITGasggiG~~~a~~l~~~G~------~V~~~~r 39 (261)
T 1gee_A 4 DLEGKVVVITGSSTGLGKSMAIRFATEKA------KVVVNYR 39 (261)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC------EEEEEcC
Confidence 366788999985 8999999999999997 7888765
No 277
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=86.85 E-value=0.35 Score=54.66 Aligned_cols=37 Identities=32% Similarity=0.519 Sum_probs=34.9
Q ss_pred HHhcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 572 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 572 kL~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
+|.+.||+|+|+|+.|..+++.|..+|+ ++|+++|.+
T Consensus 189 ~l~~~kVVv~GAGaAG~~iAkll~~~G~-----~~I~v~Dr~ 225 (388)
T 1vl6_A 189 KIEEVKVVVNGIGAAGYNIVKFLLDLGV-----KNVVAVDRK 225 (388)
T ss_dssp CTTTCEEEEECCSHHHHHHHHHHHHHTC-----CEEEEEETT
T ss_pred CCCCcEEEEECCCHHHHHHHHHHHhCCC-----CeEEEEECC
Confidence 5788999999999999999999999998 899999976
No 278
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=86.84 E-value=1.5 Score=47.48 Aligned_cols=94 Identities=15% Similarity=0.169 Sum_probs=0.0
Q ss_pred hcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEeecC
Q 002073 177 FASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSK 256 (972)
Q Consensus 177 ~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~~~ 256 (972)
...+|.|||+|.+|..+|++|+..|. .|+++| |.....+.+.+..-.. ...
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~d-----------------------r~~~~~~~~~~~g~~~-----~~~ 56 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAGL-STWGAD-----------------------LNPQACANLLAEGACG-----AAA 56 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEC-----------------------SCHHHHHHHHHTTCSE-----EES
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-eEEEEE-----------------------CCHHHHHHHHHcCCcc-----ccC
Q ss_pred CChhhhcCCceEEEcCCCHHHHHHH----HHHHHhcCCCceeEEeee
Q 002073 257 LTKEQLSDFQAVVFTDISLDKAIEF----DDFCHNHQPAISFIKAEV 299 (972)
Q Consensus 257 l~~e~l~~fdvVV~~~~~~~~~~~l----n~~c~~~~~~IpfI~a~~ 299 (972)
-..+.+.+.|+||.|..+......+ .++.....+..-+|.+.+
T Consensus 57 ~~~e~~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~g~ivv~~st 103 (303)
T 3g0o_A 57 SAREFAGVVDALVILVVNAAQVRQVLFGEDGVAHLMKPGSAVMVSST 103 (303)
T ss_dssp SSTTTTTTCSEEEECCSSHHHHHHHHC--CCCGGGSCTTCEEEECSC
T ss_pred CHHHHHhcCCEEEEECCCHHHHHHHHhChhhHHhhCCCCCEEEecCC
No 279
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=86.80 E-value=0.54 Score=51.49 Aligned_cols=38 Identities=21% Similarity=0.357 Sum_probs=31.6
Q ss_pred HHhhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCc
Q 002073 174 RRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGT 212 (972)
Q Consensus 174 ~kL~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~ 212 (972)
.+....+|.|||+|.+|..+|++|+..|. .|+++|.+.
T Consensus 27 ~~~~~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~ 64 (320)
T 4dll_A 27 SDPYARKITFLGTGSMGLPMARRLCEAGY-ALQVWNRTP 64 (320)
T ss_dssp --CCCSEEEEECCTTTHHHHHHHHHHTTC-EEEEECSCH
T ss_pred cccCCCEEEEECccHHHHHHHHHHHhCCC-eEEEEcCCH
Confidence 34455699999999999999999999997 799998654
No 280
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=86.76 E-value=2.1 Score=47.29 Aligned_cols=73 Identities=15% Similarity=0.171 Sum_probs=48.6
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHH----hcCCCEEEEee
Q 002073 179 SNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQE----LNNAVVLSTLT 254 (972)
Q Consensus 179 s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~e----LNp~V~V~~~~ 254 (972)
.+|.|+|+|.+|..+|..|+..|.-.++|+|.+. .+++.....+.. +....+++..
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~-------------------~~~~~~~~~l~~~~~~~~~~~~i~~t- 69 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK-------------------GMPEGKALDLSHVTSVVDTNVSVRAE- 69 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS-------------------SHHHHHHHHHHHHHHHTTCCCCEEEE-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh-------------------hHHHHHHHHHHhhhhccCCCCEEEEe-
Confidence 4899999999999999999999985599998542 133322222222 2223444442
Q ss_pred cCCChhhhcCCceEEEcC
Q 002073 255 SKLTKEQLSDFQAVVFTD 272 (972)
Q Consensus 255 ~~l~~e~l~~fdvVV~~~ 272 (972)
.++ ++.+++.|+||.+.
T Consensus 70 ~d~-~ea~~~aDiVi~a~ 86 (331)
T 1pzg_A 70 YSY-EAALTGADCVIVTA 86 (331)
T ss_dssp CSH-HHHHTTCSEEEECC
T ss_pred CCH-HHHhCCCCEEEEcc
Confidence 222 23578999999886
No 281
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=86.74 E-value=0.61 Score=49.94 Aligned_cols=36 Identities=22% Similarity=0.339 Sum_probs=30.5
Q ss_pred HHhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 572 KLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 572 kL~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
.|.+++++|.|+ ||||.++++.|+..|. +++++|.+
T Consensus 5 ~l~gk~vlVTGas~GIG~aia~~la~~G~------~V~~~~r~ 41 (280)
T 3tox_A 5 RLEGKIAIVTGASSGIGRAAALLFAREGA------KVVVTARN 41 (280)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTC------EEEECCSC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEECC
Confidence 366788999995 8899999999999998 78888754
No 282
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=86.71 E-value=0.89 Score=48.68 Aligned_cols=34 Identities=32% Similarity=0.467 Sum_probs=30.2
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCcc
Q 002073 179 SNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTV 213 (972)
Q Consensus 179 s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V 213 (972)
.+|.|||+|.+|..+|++|...|. .|+++|.+.-
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~ 35 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGC-SVTIWNRSPE 35 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSGG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCC-eEEEEcCCHH
Confidence 589999999999999999999995 8999987543
No 283
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=86.67 E-value=1.6 Score=47.64 Aligned_cols=102 Identities=11% Similarity=0.089 Sum_probs=60.7
Q ss_pred HhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCcE
Q 002073 573 LEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLN 651 (972)
Q Consensus 573 L~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~~ 651 (972)
+..++|+|.|+ |.||..+++.|+..|. ++++++.+.- -...|...+. .+. .+.
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g~------~V~~l~R~~~---------------~~~~~~~~~~-~l~--~~~-- 61 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAHR------PTYILARPGP---------------RSPSKAKIFK-ALE--DKG-- 61 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTTC------CEEEEECSSC---------------CCHHHHHHHH-HHH--HTT--
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCC------CEEEEECCCC---------------CChhHHHHHH-HHH--hCC--
Confidence 34579999998 8999999999999986 6777764420 0112222221 122 123
Q ss_pred EEEeecccCCCcccccchhccC--CCcEEEEccC--ChHHHHHHhhhhhccc-cceE
Q 002073 652 IEALQNRVGPETENVFDDTFWE--NITCVINALD--NVNARLYVDQRCLYFQ-KPLL 703 (972)
Q Consensus 652 I~~~~~~v~~~~e~i~~~~f~~--~~DvVi~alD--n~~aR~~v~~~c~~~~-kPli 703 (972)
++.+...+... +.+ ...++ ++|+||.+.. |+..-..+-+.|...+ ++.+
T Consensus 62 v~~~~~Dl~d~-~~l--~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~ 115 (346)
T 3i6i_A 62 AIIVYGLINEQ-EAM--EKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRF 115 (346)
T ss_dssp CEEEECCTTCH-HHH--HHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEE
T ss_pred cEEEEeecCCH-HHH--HHHHhhCCCCEEEECCchhhHHHHHHHHHHHHHcCCceEE
Confidence 34445555421 111 24456 8999999865 5666667777777666 5443
No 284
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=86.67 E-value=0.43 Score=46.92 Aligned_cols=32 Identities=28% Similarity=0.396 Sum_probs=29.4
Q ss_pred cEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCc
Q 002073 577 KVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDV 614 (972)
Q Consensus 577 kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~ 614 (972)
+|+|||+|.+|++++..|++.|. +++|+|...
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~------~v~lie~~~ 34 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGL------KVLVLDGGR 34 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC------CEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHHCCC------cEEEEeCCC
Confidence 69999999999999999999998 899998754
No 285
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=86.65 E-value=0.5 Score=50.27 Aligned_cols=82 Identities=17% Similarity=0.264 Sum_probs=51.2
Q ss_pred hcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCcEE
Q 002073 574 EDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNI 652 (972)
Q Consensus 574 ~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~~I 652 (972)
.+++++|.|+ ||||.++++.|+..|. +++++|.+. .+.+.+++.+....+ ++
T Consensus 3 ~~k~~lVTGas~GIG~aia~~la~~G~------~V~~~~r~~-------------------~~~~~~~~~l~~~~~--~~ 55 (264)
T 3tfo_A 3 MDKVILITGASGGIGEGIARELGVAGA------KILLGARRQ-------------------ARIEAIATEIRDAGG--TA 55 (264)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC------EEEEEESSH-------------------HHHHHHHHHHHHTTC--EE
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCC------EEEEEECCH-------------------HHHHHHHHHHHhcCC--cE
Confidence 4678899996 8899999999999998 788887432 344455555555433 45
Q ss_pred EEeecccCCCcc--cccc--hhccCCCcEEEEcc
Q 002073 653 EALQNRVGPETE--NVFD--DTFWENITCVINAL 682 (972)
Q Consensus 653 ~~~~~~v~~~~e--~i~~--~~f~~~~DvVi~al 682 (972)
..+...++.... ..+. .+-+...|++|++.
T Consensus 56 ~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnA 89 (264)
T 3tfo_A 56 LAQVLDVTDRHSVAAFAQAAVDTWGRIDVLVNNA 89 (264)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred EEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 555555543211 1111 11234678888764
No 286
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=86.63 E-value=0.6 Score=52.76 Aligned_cols=37 Identities=30% Similarity=0.428 Sum_probs=35.3
Q ss_pred HhhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCC
Q 002073 175 RLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 211 (972)
Q Consensus 175 kL~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d 211 (972)
+|+..+|+|+|+|..|..+|+.|+.+|+++|+++|.+
T Consensus 189 ~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 189 KIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp CTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 6788999999999999999999999999999999975
No 287
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=86.61 E-value=0.75 Score=47.85 Aligned_cols=35 Identities=23% Similarity=0.444 Sum_probs=29.9
Q ss_pred HhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 573 LEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 573 L~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
+.+++|+|.|+ |+||.++++.|+..|. +++++|.+
T Consensus 11 l~~k~vlItGasggiG~~la~~l~~~G~------~V~~~~r~ 46 (260)
T 3awd_A 11 LDNRVAIVTGGAQNIGLACVTALAEAGA------RVIIADLD 46 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC------EEEEEeCC
Confidence 56788999995 8999999999999997 78888643
No 288
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=86.61 E-value=0.78 Score=48.40 Aligned_cols=85 Identities=13% Similarity=0.194 Sum_probs=52.1
Q ss_pred HHhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCc
Q 002073 572 KLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRL 650 (972)
Q Consensus 572 kL~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~ 650 (972)
.|.+++++|.|+ |+||.++++.|+..|. +++++|.+. .+.+.+++.+.+.. ..
T Consensus 7 ~l~~k~vlVTGas~gIG~aia~~l~~~G~------~V~~~~r~~-------------------~~~~~~~~~l~~~~-~~ 60 (262)
T 3pk0_A 7 DLQGRSVVVTGGTKGIGRGIATVFARAGA------NVAVAGRST-------------------ADIDACVADLDQLG-SG 60 (262)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEESCH-------------------HHHHHHHHHHHTTS-SS
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEeCCH-------------------HHHHHHHHHHHhhC-CC
Confidence 356788999985 8899999999999998 888887542 23444555555443 13
Q ss_pred EEEEeecccCCCcc--cccc--hhccCCCcEEEEcc
Q 002073 651 NIEALQNRVGPETE--NVFD--DTFWENITCVINAL 682 (972)
Q Consensus 651 ~I~~~~~~v~~~~e--~i~~--~~f~~~~DvVi~al 682 (972)
++..+...++.... ..+. .+-+...|++|++.
T Consensus 61 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnA 96 (262)
T 3pk0_A 61 KVIGVQTDVSDRAQCDALAGRAVEEFGGIDVVCANA 96 (262)
T ss_dssp CEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECC
T ss_pred cEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECC
Confidence 55555555553211 1111 01234677777764
No 289
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=86.56 E-value=2.6 Score=44.85 Aligned_cols=82 Identities=10% Similarity=-0.015 Sum_probs=50.6
Q ss_pred hcCeEEEEcCChHHHHHHHHHHHhcC-CEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEeec
Q 002073 177 FASNILVSGMQGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTS 255 (972)
Q Consensus 177 ~~s~VlIvG~gGlG~EiaKNLvLaGV-g~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~~ 255 (972)
...+|.|||+|.+|..+|+.|...|. ..|+++|.+. .+++ .+.+..... .. ..
T Consensus 5 ~~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~-------------------~~~~----~~~~~g~~~--~~-~~ 58 (290)
T 3b1f_A 5 EEKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSD-------------------RSRD----IALERGIVD--EA-TA 58 (290)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSH-------------------HHHH----HHHHTTSCS--EE-ES
T ss_pred ccceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCH-------------------HHHH----HHHHcCCcc--cc-cC
Confidence 34689999999999999999999964 3688877432 1222 222221100 11 11
Q ss_pred CCChhhhcCCceEEEcCCCHHHHHHHHHHH
Q 002073 256 KLTKEQLSDFQAVVFTDISLDKAIEFDDFC 285 (972)
Q Consensus 256 ~l~~e~l~~fdvVV~~~~~~~~~~~ln~~c 285 (972)
++ ++.+.+.|+||+|..+......+.++.
T Consensus 59 ~~-~~~~~~aDvVilavp~~~~~~v~~~l~ 87 (290)
T 3b1f_A 59 DF-KVFAALADVIILAVPIKKTIDFIKILA 87 (290)
T ss_dssp CT-TTTGGGCSEEEECSCHHHHHHHHHHHH
T ss_pred CH-HHhhcCCCEEEEcCCHHHHHHHHHHHH
Confidence 22 245678999999987655544555543
No 290
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=86.52 E-value=0.41 Score=51.01 Aligned_cols=36 Identities=19% Similarity=0.312 Sum_probs=32.8
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCc
Q 002073 176 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGT 212 (972)
Q Consensus 176 L~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~ 212 (972)
+.+ +|+|+|+||.|..++..|...|+++|++++.+.
T Consensus 107 ~~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~ 142 (253)
T 3u62_A 107 VKE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI 142 (253)
T ss_dssp CCS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred CCC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 467 999999999999999999999999999998643
No 291
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=86.51 E-value=1.1 Score=49.36 Aligned_cols=73 Identities=18% Similarity=0.185 Sum_probs=48.4
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcC-CEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcC---CCEEEEe
Q 002073 178 ASNILVSGMQGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNN---AVVLSTL 253 (972)
Q Consensus 178 ~s~VlIvG~gGlG~EiaKNLvLaGV-g~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp---~V~V~~~ 253 (972)
..+|.|+|+|.+|..++-.|+..|. ++|+|+|-+. .|++..+..|.+..| .+++..
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~-------------------~~~~g~~~dl~~~~~~~~~~~i~~- 66 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK-------------------EKAIGEAMDINHGLPFMGQMSLYA- 66 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC----------------------CCHHHHHHTTSCCCTTCEEEC--
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh-------------------HHHHHHHHHHHHhHHhcCCeEEEE-
Confidence 3689999999999999999999885 6899999542 111122233333322 334443
Q ss_pred ecCCChhhhcCCceEEEcCC
Q 002073 254 TSKLTKEQLSDFQAVVFTDI 273 (972)
Q Consensus 254 ~~~l~~e~l~~fdvVV~~~~ 273 (972)
+ +.+.+++.|+||.+..
T Consensus 67 -~--~~~a~~~aDvVii~~g 83 (318)
T 1y6j_A 67 -G--DYSDVKDCDVIVVTAG 83 (318)
T ss_dssp ----CGGGGTTCSEEEECCC
T ss_pred -C--CHHHhCCCCEEEEcCC
Confidence 2 3456889999999865
No 292
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=86.49 E-value=0.9 Score=48.65 Aligned_cols=33 Identities=27% Similarity=0.415 Sum_probs=29.5
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCc
Q 002073 179 SNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGT 212 (972)
Q Consensus 179 s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~ 212 (972)
.+|.|||+|.+|..+|++|...|. .|+++|.+.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~-~V~~~dr~~ 34 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGF-DVTVWNRNP 34 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTC-CEEEECSSG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCH
Confidence 479999999999999999999995 799998654
No 293
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=86.49 E-value=0.18 Score=57.86 Aligned_cols=42 Identities=17% Similarity=0.387 Sum_probs=37.2
Q ss_pred HHHhcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCcc
Q 002073 571 KKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVI 615 (972)
Q Consensus 571 ~kL~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~I 615 (972)
++|.+.||++.|||+-|+.+++.|...|+. ..+|+++|..-+
T Consensus 215 k~l~d~riV~~GAGaAGigia~ll~~~G~~---~~~i~l~D~~Gl 256 (487)
T 3nv9_A 215 KDIHECRMVFIGAGSSNTTCLRLIVTAGAD---PKKIVMFDSKGS 256 (487)
T ss_dssp CCGGGCCEEEECCSHHHHHHHHHHHHTTCC---GGGEEEEETTEE
T ss_pred CChhhcEEEEECCCHHHHHHHHHHHHcCCC---cccEEEEecccc
Confidence 568899999999999999999999999993 379999998754
No 294
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=86.47 E-value=3 Score=46.20 Aligned_cols=33 Identities=24% Similarity=0.230 Sum_probs=28.5
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHhcCCEEEEEeCCc
Q 002073 179 SNILVSGM-QGLGAEIAKNLILAGVKSVTLHDEGT 212 (972)
Q Consensus 179 s~VlIvG~-gGlG~EiaKNLvLaGVg~itLvD~d~ 212 (972)
.+|||.|. |++|..+++.|...|. +|+++|...
T Consensus 30 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~ 63 (379)
T 2c5a_A 30 LKISITGAGGFIASHIARRLKHEGH-YVIASDWKK 63 (379)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSC
T ss_pred CeEEEECCccHHHHHHHHHHHHCCC-eEEEEECCC
Confidence 58999997 8999999999999995 788887643
No 295
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=86.46 E-value=1.7 Score=47.80 Aligned_cols=33 Identities=27% Similarity=0.431 Sum_probs=29.5
Q ss_pred CcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 576 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 576 ~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
.||.|||+|.+|..++..|+..|. ..++++|-|
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~-----~~v~L~Di~ 37 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNL-----GDVVLFDIV 37 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-----CEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-----CeEEEEeCC
Confidence 589999999999999999999998 459999865
No 296
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=86.44 E-value=1.3 Score=46.34 Aligned_cols=35 Identities=17% Similarity=0.438 Sum_probs=29.8
Q ss_pred HhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 573 LEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 573 L~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
+.+++++|.|+ |+||.++++.|+..|. +++++|.+
T Consensus 7 l~~k~vlVTGas~giG~~ia~~l~~~G~------~V~~~~r~ 42 (260)
T 2ae2_A 7 LEGCTALVTGGSRGIGYGIVEELASLGA------SVYTCSRN 42 (260)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 56788999995 8899999999999997 78888654
No 297
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=86.44 E-value=1.7 Score=46.84 Aligned_cols=35 Identities=29% Similarity=0.318 Sum_probs=28.7
Q ss_pred hhcCeEEEEcC-ChHHHHHHHHHHHhcCCEEEEEeCC
Q 002073 176 LFASNILVSGM-QGLGAEIAKNLILAGVKSVTLHDEG 211 (972)
Q Consensus 176 L~~s~VlIvG~-gGlG~EiaKNLvLaGVg~itLvD~d 211 (972)
|++.+|||.|. |++|..+++.|...|. +|+++|..
T Consensus 1 m~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~ 36 (345)
T 2z1m_A 1 MSGKRALITGIRGQDGAYLAKLLLEKGY-EVYGADRR 36 (345)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECC
Confidence 45678999996 9999999999999995 78888753
No 298
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=86.41 E-value=0.68 Score=48.56 Aligned_cols=36 Identities=17% Similarity=0.374 Sum_probs=30.4
Q ss_pred HHhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 572 KLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 572 kL~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
.+.+++++|.|+ |+||.++++.|+..|. +++++|.+
T Consensus 11 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~ 47 (260)
T 2zat_A 11 PLENKVALVTASTDGIGLAIARRLAQDGA------HVVVSSRK 47 (260)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 366788999985 8999999999999997 78888654
No 299
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=86.41 E-value=0.75 Score=50.31 Aligned_cols=36 Identities=8% Similarity=-0.016 Sum_probs=31.9
Q ss_pred HhhcCeEEEEcCChHHHHHHHHHHHh-cCCEEEEEeC
Q 002073 175 RLFASNILVSGMQGLGAEIAKNLILA-GVKSVTLHDE 210 (972)
Q Consensus 175 kL~~s~VlIvG~gGlG~EiaKNLvLa-GVg~itLvD~ 210 (972)
+....+|.|||+|..|..++++|... |+.+++++|.
T Consensus 132 ~~~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr 168 (312)
T 2i99_A 132 PPSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNR 168 (312)
T ss_dssp CTTCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECS
T ss_pred CCCCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcC
Confidence 34567899999999999999999988 9889999874
No 300
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=86.35 E-value=2.6 Score=44.30 Aligned_cols=62 Identities=21% Similarity=0.255 Sum_probs=45.0
Q ss_pred hhcCeEEEEc-CChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEee
Q 002073 176 LFASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLT 254 (972)
Q Consensus 176 L~~s~VlIvG-~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~ 254 (972)
|+++.|+|.| .+|+|.++|+.|+..|. +|.++|.+ ..+.+.+.+.+.+..+...+..+.
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~ 65 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEAGA-AVAFCARD-------------------GERLRAAESALRQRFPGARLFASV 65 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESC-------------------HHHHHHHHHHHHHHSTTCCEEEEE
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCC-------------------HHHHHHHHHHHHHhcCCceEEEEe
Confidence 5678899997 57999999999999998 58887742 235566667777666655555554
Q ss_pred cCC
Q 002073 255 SKL 257 (972)
Q Consensus 255 ~~l 257 (972)
.++
T Consensus 66 ~Dv 68 (265)
T 3lf2_A 66 CDV 68 (265)
T ss_dssp CCT
T ss_pred CCC
Confidence 444
No 301
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=86.30 E-value=1.1 Score=46.45 Aligned_cols=35 Identities=26% Similarity=0.406 Sum_probs=30.0
Q ss_pred HhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 573 LEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 573 L~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
+.+++++|.|+ |+||.++++.|+..|. +++++|.+
T Consensus 5 l~~k~vlVTGasggiG~~~a~~l~~~G~------~V~~~~r~ 40 (258)
T 3afn_B 5 LKGKRVLITGSSQGIGLATARLFARAGA------KVGLHGRK 40 (258)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC------EEEEECCC
Confidence 56788999985 8999999999999997 78888754
No 302
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=86.25 E-value=0.9 Score=49.15 Aligned_cols=33 Identities=18% Similarity=0.403 Sum_probs=28.4
Q ss_pred cCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 575 DAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 575 ~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
+++|+|.|+ |+||..+++.|+..|. +++++|.+
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~G~------~V~~~~r~ 38 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLAHGY------DVVIADNL 38 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHHTTC------EEEEECCC
T ss_pred CcEEEEecCCcHHHHHHHHHHHHCCC------cEEEEecC
Confidence 468999995 8999999999999997 78888753
No 303
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=86.20 E-value=3.2 Score=41.82 Aligned_cols=30 Identities=20% Similarity=0.335 Sum_probs=27.3
Q ss_pred eEEEEc-CChHHHHHHHHHHHhcCCEEEEEeC
Q 002073 180 NILVSG-MQGLGAEIAKNLILAGVKSVTLHDE 210 (972)
Q Consensus 180 ~VlIvG-~gGlG~EiaKNLvLaGVg~itLvD~ 210 (972)
+|+|+| +|.+|..+++.|...|. +++++|.
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~-~V~~~~r 32 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGH-EIVVGSR 32 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTC-EEEEEES
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 799999 99999999999999996 7888875
No 304
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=86.16 E-value=1.9 Score=47.28 Aligned_cols=74 Identities=20% Similarity=0.275 Sum_probs=50.4
Q ss_pred cCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhC---CCcE
Q 002073 575 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSIN---PRLN 651 (972)
Q Consensus 575 ~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~in---P~~~ 651 (972)
+.||.|||+|.+|..++-.|+..|.. .+|.++|-| +.|++..+..+.+.. +.++
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~~~~----~el~L~Di~-------------------~~~~~g~~~dl~~~~~~~~~~~ 61 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQGIA----EEFVIVDVV-------------------KDRTKGDALDLEDAQAFTAPKK 61 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHHTCC----SEEEEECSS-------------------HHHHHHHHHHHHGGGGGSCCCE
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCC----CEEEEEeCC-------------------chHHHHHHHHHHHHHHhcCCeE
Confidence 36899999999999999999999873 689998742 234444444444332 3445
Q ss_pred EEEeecccCCCcccccchhccCCCcEEEEccC
Q 002073 652 IEALQNRVGPETENVFDDTFWENITCVINALD 683 (972)
Q Consensus 652 I~~~~~~v~~~~e~i~~~~f~~~~DvVi~alD 683 (972)
+.+ +. .+-+++.|+||.+..
T Consensus 62 v~~-----~~-------~~a~~~aDvVii~ag 81 (318)
T 1ez4_A 62 IYS-----GE-------YSDCKDADLVVITAG 81 (318)
T ss_dssp EEE-----CC-------GGGGTTCSEEEECCC
T ss_pred EEE-----CC-------HHHhCCCCEEEECCC
Confidence 553 11 123679999999875
No 305
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=86.13 E-value=0.9 Score=49.76 Aligned_cols=80 Identities=18% Similarity=0.202 Sum_probs=50.4
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcC---CEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEee
Q 002073 178 ASNILVSGMQGLGAEIAKNLILAGV---KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLT 254 (972)
Q Consensus 178 ~s~VlIvG~gGlG~EiaKNLvLaGV---g~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~ 254 (972)
..+|.|||+|.+|..+|++|..+|+ ..|+++|.+.- ..+++. +.+.. +.+. .
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~-----------------~~~~~~----l~~~G--~~~~--~ 76 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMD-----------------LATVSA----LRKMG--VKLT--P 76 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTT-----------------SHHHHH----HHHHT--CEEE--S
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCcc-----------------HHHHHH----HHHcC--CEEe--C
Confidence 3489999999999999999999995 57888774320 012222 22222 3321 1
Q ss_pred cCCChhhhcCCceEEEcCCCHHHHHHHHHH
Q 002073 255 SKLTKEQLSDFQAVVFTDISLDKAIEFDDF 284 (972)
Q Consensus 255 ~~l~~e~l~~fdvVV~~~~~~~~~~~ln~~ 284 (972)
+ ..+.+.++|+||+|..+......+.++
T Consensus 77 -~-~~e~~~~aDvVilav~~~~~~~vl~~l 104 (322)
T 2izz_A 77 -H-NKETVQHSDVLFLAVKPHIIPFILDEI 104 (322)
T ss_dssp -C-HHHHHHHCSEEEECSCGGGHHHHHHHH
T ss_pred -C-hHHHhccCCEEEEEeCHHHHHHHHHHH
Confidence 1 234567899999998754444444443
No 306
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=86.12 E-value=1.2 Score=47.39 Aligned_cols=35 Identities=26% Similarity=0.461 Sum_probs=29.8
Q ss_pred HHhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcC
Q 002073 572 KLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDD 612 (972)
Q Consensus 572 kL~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~ 612 (972)
.|.+++++|.|+ ||||.++++.|+..|. +++++|.
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~G~------~V~~~~~ 63 (271)
T 3v2g_A 28 SLAGKTAFVTGGSRGIGAAIAKRLALEGA------AVALTYV 63 (271)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEeC
Confidence 366788999995 7899999999999998 7877754
No 307
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=86.08 E-value=0.8 Score=47.40 Aligned_cols=34 Identities=24% Similarity=0.397 Sum_probs=29.4
Q ss_pred HhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcC
Q 002073 573 LEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDD 612 (972)
Q Consensus 573 L~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~ 612 (972)
+.+++++|.|+ |+||.++++.|+..|. +++++|.
T Consensus 9 ~~~~~vlVtGasggiG~~la~~l~~~G~------~V~~~~r 43 (255)
T 1fmc_A 9 LDGKCAIITGAGAGIGKEIAITFATAGA------SVVVSDI 43 (255)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHTTTC------EEEEEES
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCC------EEEEEcC
Confidence 56788999996 8999999999999997 7888764
No 308
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=86.06 E-value=1.4 Score=45.95 Aligned_cols=31 Identities=26% Similarity=0.321 Sum_probs=26.8
Q ss_pred cEEEEcCCcchHHHHHHHHHccccCCCCceE-EEEcCC
Q 002073 577 KVFIVGSGALGCEFLKNVALMGVSCGNQGKL-TITDDD 613 (972)
Q Consensus 577 kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i-~iiD~D 613 (972)
||.|||+|.+|..++++|...|+ ++ .+.|.+
T Consensus 2 ~vgiIG~G~mG~~~~~~l~~~g~------~lv~v~d~~ 33 (236)
T 2dc1_A 2 LVGLIGYGAIGKFLAEWLERNGF------EIAAILDVR 33 (236)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC------EEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHhcCCC------EEEEEEecC
Confidence 79999999999999999998777 55 677765
No 309
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=86.06 E-value=0.92 Score=48.33 Aligned_cols=83 Identities=12% Similarity=0.202 Sum_probs=54.5
Q ss_pred HHhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCc
Q 002073 572 KLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRL 650 (972)
Q Consensus 572 kL~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~ 650 (972)
.|+++.++|-|+ +|||.++++.|+..|. ++.++|.+ +.+.+.+++.++....
T Consensus 4 sL~gKvalVTGas~GIG~aiA~~la~~Ga------~Vv~~~~~-------------------~~~~~~~~~~i~~~g~-- 56 (254)
T 4fn4_A 4 SLKNKVVIVTGAGSGIGRAIAKKFALNDS------IVVAVELL-------------------EDRLNQIVQELRGMGK-- 56 (254)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESC-------------------HHHHHHHHHHHHHTTC--
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCC------EEEEEECC-------------------HHHHHHHHHHHHhcCC--
Confidence 578899999995 7899999999999998 88888743 2355666677766554
Q ss_pred EEEEeecccCCCcc--cccc--hhccCCCcEEEEc
Q 002073 651 NIEALQNRVGPETE--NVFD--DTFWENITCVINA 681 (972)
Q Consensus 651 ~I~~~~~~v~~~~e--~i~~--~~f~~~~DvVi~a 681 (972)
++..+...++...+ ..++ .+-|...|++||+
T Consensus 57 ~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVNN 91 (254)
T 4fn4_A 57 EVLGVKADVSKKKDVEEFVRRTFETYSRIDVLCNN 91 (254)
T ss_dssp CEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred cEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 45555555553221 1111 1224566766665
No 310
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=85.97 E-value=1.3 Score=52.11 Aligned_cols=87 Identities=13% Similarity=0.246 Sum_probs=64.7
Q ss_pred CcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCcEEEEe
Q 002073 576 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEAL 655 (972)
Q Consensus 576 ~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~~I~~~ 655 (972)
.+++|+|+|-+|..+++.|...|. .++++|.|.-....+. ..+
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~------~v~vid~d~~~~~~~~-------------------------------~~i 391 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPV------PFILIDRQESPVCNDH-------------------------------VVV 391 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC------CEEEEESSCCSSCCSS-------------------------------CEE
T ss_pred CCEEEECCCHHHHHHHHHHHHCCC------CEEEEECChHHHhhcC-------------------------------CEE
Confidence 899999999999999999999998 8999998853222110 122
Q ss_pred ecccCCCcccccchhccCCCcEEEEccCChHHHHHHhhhhhccccc
Q 002073 656 QNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKP 701 (972)
Q Consensus 656 ~~~v~~~~e~i~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~~~kP 701 (972)
.... ..++.+...-.+++|.+|.++++.++-..+...+...+.+
T Consensus 392 ~gD~--t~~~~L~~agi~~ad~vi~~~~~d~~ni~~~~~ak~l~~~ 435 (565)
T 4gx0_A 392 YGDA--TVGQTLRQAGIDRASGIIVTTNDDSTNIFLTLACRHLHSH 435 (565)
T ss_dssp ESCS--SSSTHHHHHTTTSCSEEEECCSCHHHHHHHHHHHHHHCSS
T ss_pred EeCC--CCHHHHHhcCccccCEEEEECCCchHHHHHHHHHHHHCCC
Confidence 2222 2234455566789999999999998888888888877643
No 311
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=85.95 E-value=0.75 Score=48.94 Aligned_cols=36 Identities=25% Similarity=0.489 Sum_probs=30.4
Q ss_pred HHhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 572 KLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 572 kL~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
.|.+++++|.|+ ||||.++++.|+..|. +++++|.+
T Consensus 23 ~l~gk~~lVTGas~gIG~aia~~la~~G~------~V~~~~r~ 59 (271)
T 4ibo_A 23 DLGGRTALVTGSSRGLGRAMAEGLAVAGA------RILINGTD 59 (271)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTC------EEEECCSC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 467788999995 8899999999999998 78887643
No 312
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=85.93 E-value=1.2 Score=47.58 Aligned_cols=36 Identities=17% Similarity=0.349 Sum_probs=30.5
Q ss_pred HHHhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcC
Q 002073 571 KKLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDD 612 (972)
Q Consensus 571 ~kL~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~ 612 (972)
..|..++++|.|+ ||||.++++.|+..|. +++++|.
T Consensus 21 ~~l~~k~~lVTGas~GIG~~ia~~la~~G~------~V~~~~r 57 (281)
T 3v2h_A 21 QSMMTKTAVITGSTSGIGLAIARTLAKAGA------NIVLNGF 57 (281)
T ss_dssp -CCTTCEEEEETCSSHHHHHHHHHHHHTTC------EEEEECC
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEeC
Confidence 3567788999995 8899999999999998 8888765
No 313
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=85.90 E-value=1.3 Score=47.89 Aligned_cols=32 Identities=19% Similarity=0.247 Sum_probs=27.2
Q ss_pred CcEEEEcC-CcchHHHHHHHHHc-cccCCCCceEEEEcCC
Q 002073 576 AKVFIVGS-GALGCEFLKNVALM-GVSCGNQGKLTITDDD 613 (972)
Q Consensus 576 ~kVlIVGa-GgiG~e~lknLa~~-Gv~~~~~g~i~iiD~D 613 (972)
++|+|.|+ |.||..+++.|+.. |. +++++|.+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~------~V~~~~r~ 34 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHY------EVYGLDIG 34 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTC------EEEEEESC
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCC------EEEEEeCC
Confidence 37999997 99999999999998 66 78888754
No 314
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=85.88 E-value=2.9 Score=44.47 Aligned_cols=31 Identities=26% Similarity=0.390 Sum_probs=27.1
Q ss_pred eEEEEcC-ChHHHHHHHHHHHhcCCEEEEEeCC
Q 002073 180 NILVSGM-QGLGAEIAKNLILAGVKSVTLHDEG 211 (972)
Q Consensus 180 ~VlIvG~-gGlG~EiaKNLvLaGVg~itLvD~d 211 (972)
+|||.|. |++|..+++.|...|. +|+++|..
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 33 (312)
T 3ko8_A 2 RIVVTGGAGFIGSHLVDKLVELGY-EVVVVDNL 33 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC-EEEEECCC
T ss_pred EEEEECCCChHHHHHHHHHHhCCC-EEEEEeCC
Confidence 7999997 8999999999999996 78887753
No 315
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=85.83 E-value=0.56 Score=51.01 Aligned_cols=34 Identities=21% Similarity=0.400 Sum_probs=29.9
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCc
Q 002073 178 ASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGT 212 (972)
Q Consensus 178 ~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~ 212 (972)
..+|.|||+|.+|..+|++|...|. .|+++|.+.
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~-~V~~~dr~~ 42 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGK-RVAIWNRSP 42 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence 4689999999999999999999997 688887543
No 316
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=85.80 E-value=0.72 Score=51.66 Aligned_cols=37 Identities=16% Similarity=0.391 Sum_probs=30.9
Q ss_pred HHhcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCc
Q 002073 572 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDV 614 (972)
Q Consensus 572 kL~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~ 614 (972)
-++..+|.|||+|.+|..++++|+..|. +++++|.+.
T Consensus 19 Mm~~mkIgiIGlG~mG~~~A~~L~~~G~------~V~v~dr~~ 55 (358)
T 4e21_A 19 YFQSMQIGMIGLGRMGADMVRRLRKGGH------ECVVYDLNV 55 (358)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTC------EEEEECSCH
T ss_pred hhcCCEEEEECchHHHHHHHHHHHhCCC------EEEEEeCCH
Confidence 3556899999999999999999999997 889988653
No 317
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=85.79 E-value=0.89 Score=47.42 Aligned_cols=35 Identities=20% Similarity=0.356 Sum_probs=29.8
Q ss_pred HhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 573 LEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 573 L~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
+.+++++|.|+ ||||.++++.|+..|. +++++|.+
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~~~G~------~V~~~~r~ 40 (247)
T 2jah_A 5 LQGKVALITGASSGIGEATARALAAEGA------AVAIAARR 40 (247)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEECC
Confidence 56788999995 8999999999999997 78887643
No 318
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=85.76 E-value=1.1 Score=49.89 Aligned_cols=35 Identities=23% Similarity=0.302 Sum_probs=32.1
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCC
Q 002073 176 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 211 (972)
Q Consensus 176 L~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d 211 (972)
+...+|+|+|+|++|..+++.+...|. +|+++|.+
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~ 199 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDIN 199 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCC
Confidence 677899999999999999999999999 89999853
No 319
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=85.75 E-value=1 Score=48.21 Aligned_cols=36 Identities=17% Similarity=0.372 Sum_probs=30.6
Q ss_pred HHhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 572 KLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 572 kL~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
.+.+++|+|.|+ |+||.++++.|+..|. +++++|.+
T Consensus 15 ~l~~k~vlVTGasggIG~~la~~l~~~G~------~V~~~~r~ 51 (303)
T 1yxm_A 15 LLQGQVAIVTGGATGIGKAIVKELLELGS------NVVIASRK 51 (303)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 466789999995 8999999999999997 78888643
No 320
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=85.75 E-value=1.2 Score=46.83 Aligned_cols=36 Identities=19% Similarity=0.374 Sum_probs=30.3
Q ss_pred HHhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 572 KLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 572 kL~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
.+.+++++|.|+ |+||.++++.|+..|. +++++|.+
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~ 40 (262)
T 1zem_A 4 KFNGKVCLVTGAGGNIGLATALRLAEEGT------AIALLDMN 40 (262)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 356788999995 8999999999999997 78888643
No 321
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=85.72 E-value=1.2 Score=44.75 Aligned_cols=92 Identities=14% Similarity=0.094 Sum_probs=58.7
Q ss_pred eEEEEcC-ChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEeecCCC
Q 002073 180 NILVSGM-QGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKLT 258 (972)
Q Consensus 180 ~VlIvG~-gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~~~l~ 258 (972)
+|+|.|. |++|..+++.|+..|. +|++++.+. .+ +.++.+.+. ....+++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~-------------------~~-------~~~~~~~~~--~~~~D~~ 52 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGH-EVTAIVRNA-------------------GK-------ITQTHKDIN--ILQKDIF 52 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCS-------------------HH-------HHHHCSSSE--EEECCGG
T ss_pred eEEEEcCCchhHHHHHHHHHhCCC-EEEEEEcCc-------------------hh-------hhhccCCCe--EEecccc
Confidence 6999995 8999999999999995 788877531 11 122224333 3344443
Q ss_pred h---hhhcCCceEEEcCCC--------HHHHHHHHHHHHhcCCCceeEEeeecc
Q 002073 259 K---EQLSDFQAVVFTDIS--------LDKAIEFDDFCHNHQPAISFIKAEVRG 301 (972)
Q Consensus 259 ~---e~l~~fdvVV~~~~~--------~~~~~~ln~~c~~~~~~IpfI~a~~~G 301 (972)
+ +.+.++|+||.+... ......+-+.|++.+. ..+|..++.+
T Consensus 53 d~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~l~~a~~~~~~-~~~v~~SS~~ 105 (221)
T 3ew7_A 53 DLTLSDLSDQNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVS-PRLLVVGGAA 105 (221)
T ss_dssp GCCHHHHTTCSEEEECCCSSTTTTTSHHHHHHHHHHHHCSCCS-SEEEEECCCC
T ss_pred ChhhhhhcCCCEEEECCcCCccccchHHHHHHHHHHHHHhcCC-ceEEEEecce
Confidence 2 467789999987532 2344566777887742 4566665543
No 322
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=85.70 E-value=1.8 Score=47.94 Aligned_cols=37 Identities=30% Similarity=0.634 Sum_probs=30.5
Q ss_pred HHhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 572 KLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 572 kL~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
++..++|+|.|+ |.||..+++.|+..|. -+++++|.+
T Consensus 29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~-----~~V~~~~r~ 66 (377)
T 2q1s_A 29 KLANTNVMVVGGAGFVGSNLVKRLLELGV-----NQVHVVDNL 66 (377)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTC-----SEEEEECCC
T ss_pred HhCCCEEEEECCccHHHHHHHHHHHHcCC-----ceEEEEECC
Confidence 456789999996 8899999999999992 288888654
No 323
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=85.67 E-value=0.44 Score=53.98 Aligned_cols=38 Identities=21% Similarity=0.423 Sum_probs=35.6
Q ss_pred HHhcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCc
Q 002073 572 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDV 614 (972)
Q Consensus 572 kL~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~ 614 (972)
+|.+.||+|+|+|+.|+.+++.|..+|+ ++|+++|.+-
T Consensus 185 ~l~d~kVVi~GAGaAG~~iA~ll~~~Ga-----~~I~v~D~~G 222 (398)
T 2a9f_A 185 SLDEVSIVVNGGGSAGLSITRKLLAAGA-----TKVTVVDKFG 222 (398)
T ss_dssp CTTSCEEEEECCSHHHHHHHHHHHHHTC-----CEEEEEETTE
T ss_pred CCCccEEEEECCCHHHHHHHHHHHHcCC-----CeEEEEECCC
Confidence 6778999999999999999999999999 8999999875
No 324
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=85.65 E-value=3.3 Score=44.65 Aligned_cols=105 Identities=13% Similarity=0.239 Sum_probs=61.5
Q ss_pred cCeEEEEc-CChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEeecC
Q 002073 178 ASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSK 256 (972)
Q Consensus 178 ~s~VlIvG-~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~~~ 256 (972)
+.+|||.| .|++|..+++.|...|. +|+++|...-.. ....+.+.+..+ ..+..+..+
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~-------------------~~~~~~~~~~~~-~~~~~~~~D 63 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLAHGY-DVVIADNLVNSK-------------------REAIARIEKITG-KTPAFHETD 63 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCCSSSC-------------------THHHHHHHHHHS-CCCEEECCC
T ss_pred CcEEEEecCCcHHHHHHHHHHHHCCC-cEEEEecCCcch-------------------HHHHHHHHhhcC-CCceEEEee
Confidence 45899998 58999999999999996 677776432110 111223333221 133444555
Q ss_pred CCh-----hhhc--CCceEEEcCC-----------------CHHHHHHHHHHHHhcCCCceeEEeeecceeE
Q 002073 257 LTK-----EQLS--DFQAVVFTDI-----------------SLDKAIEFDDFCHNHQPAISFIKAEVRGLFG 304 (972)
Q Consensus 257 l~~-----e~l~--~fdvVV~~~~-----------------~~~~~~~ln~~c~~~~~~IpfI~a~~~G~~G 304 (972)
+++ +.++ +.|+||.+.. +......+-+.|++.+. -.||..++.+.+|
T Consensus 64 l~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~iv~~SS~~~~g 134 (341)
T 3enk_A 64 VSDERALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAV-KRIVFSSSATVYG 134 (341)
T ss_dssp TTCHHHHHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTC-CEEEEEEEGGGBC
T ss_pred cCCHHHHHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCC-CEEEEEecceEec
Confidence 532 2344 6788876543 11122345567887761 2688887776664
No 325
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=85.65 E-value=0.94 Score=48.31 Aligned_cols=36 Identities=17% Similarity=0.339 Sum_probs=31.0
Q ss_pred HHhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 572 KLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 572 kL~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
.|++++++|.|+ ||||.++++.|+..|. +++++|.+
T Consensus 29 ~l~gk~~lVTGas~GIG~aia~~la~~G~------~V~~~~r~ 65 (276)
T 3r1i_A 29 DLSGKRALITGASTGIGKKVALAYAEAGA------QVAVAARH 65 (276)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 467889999995 8899999999999998 78888753
No 326
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=85.62 E-value=0.54 Score=49.41 Aligned_cols=38 Identities=24% Similarity=0.434 Sum_probs=30.7
Q ss_pred HHHHhcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 570 QKKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 570 q~kL~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
...+...+|.|||+|.+|..++++|+..|. ++++.|.+
T Consensus 14 ~~~~~~~kIgiIG~G~mG~alA~~L~~~G~------~V~~~~r~ 51 (245)
T 3dtt_A 14 NLYFQGMKIAVLGTGTVGRTMAGALADLGH------EVTIGTRD 51 (245)
T ss_dssp -----CCEEEEECCSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred ccccCCCeEEEECCCHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 457889999999999999999999999997 88888765
No 327
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=85.58 E-value=1.4 Score=47.26 Aligned_cols=93 Identities=13% Similarity=0.081 Sum_probs=0.0
Q ss_pred hcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEeecC
Q 002073 177 FASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSK 256 (972)
Q Consensus 177 ~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~~~ 256 (972)
...+|.|+|+|.+|..++++|...|. .|+++| |.....+.+.+. .+.....
T Consensus 3 ~~~~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~-----------------------~~~~~~~~~~~~----g~~~~~~- 53 (301)
T 3cky_A 3 KSIKIGFIGLGAMGKPMAINLLKEGV-TVYAFD-----------------------LMEANVAAVVAQ----GAQACEN- 53 (301)
T ss_dssp -CCEEEEECCCTTHHHHHHHHHHTTC-EEEEEC-----------------------SSHHHHHHHHTT----TCEECSS-
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCC-eEEEEe-----------------------CCHHHHHHHHHC----CCeecCC-
Q ss_pred CChhhhcCCceEEEcC-CCHHHHHHHH---HHHHhcCCCceeEEeee
Q 002073 257 LTKEQLSDFQAVVFTD-ISLDKAIEFD---DFCHNHQPAISFIKAEV 299 (972)
Q Consensus 257 l~~e~l~~fdvVV~~~-~~~~~~~~ln---~~c~~~~~~IpfI~a~~ 299 (972)
.++.+.++|+||.|. .+......+. ++.....+...+|...+
T Consensus 54 -~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vv~~~~ 99 (301)
T 3cky_A 54 -NQKVAAASDIIFTSLPNAGIVETVMNGPGGVLSACKAGTVIVDMSS 99 (301)
T ss_dssp -HHHHHHHCSEEEECCSSHHHHHHHHHSTTCHHHHSCTTCEEEECCC
T ss_pred -HHHHHhCCCEEEEECCCHHHHHHHHcCcchHhhcCCCCCEEEECCC
No 328
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=85.58 E-value=2.9 Score=46.07 Aligned_cols=111 Identities=16% Similarity=0.132 Sum_probs=63.8
Q ss_pred hcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcC---CC-----
Q 002073 177 FASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNN---AV----- 248 (972)
Q Consensus 177 ~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp---~V----- 248 (972)
...+|.|||+|-.|+-||-.++.+|. .|+|+|.+.-. +. -+..+.+...+++.+... ..
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~G~-~V~l~D~~~~~---l~---------~~~~~i~~~l~~~~~~g~~~~~~~~~~~ 71 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASGGF-RVKLYDIEPRQ---IT---------GALENIRKEMKSLQQSGSLKGSLSAEEQ 71 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHH---HH---------HHHHHHHHHHHHHHHTTCCCSSSCHHHH
T ss_pred CCCeEEEECCcHHHHHHHHHHHhCCC-eEEEEECCHHH---HH---------HHHHHHHHHHHHHHHcCCCCCccCHHHH
Confidence 34689999999999999999999998 69999964311 10 122223333333333221 00
Q ss_pred --EEEEeecCCChhhhcCCceEEEcCC-CHHHHHHHHHHHHhcCCCceeEEeeecce
Q 002073 249 --VLSTLTSKLTKEQLSDFQAVVFTDI-SLDKAIEFDDFCHNHQPAISFIKAEVRGL 302 (972)
Q Consensus 249 --~V~~~~~~l~~e~l~~fdvVV~~~~-~~~~~~~ln~~c~~~~~~IpfI~a~~~G~ 302 (972)
.++..+ ++ ++.+++.|+||-+.. +++.+..+-+-..+.-+|-.+|.+.|.++
T Consensus 72 l~~i~~~~-~l-~~a~~~ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSsl 126 (319)
T 3ado_A 72 LSLISSCT-NL-AEAVEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCL 126 (319)
T ss_dssp HHTEEEEC-CH-HHHTTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSC
T ss_pred Hhhccccc-ch-HhHhccCcEEeeccccHHHHHHHHHHHHHHHhhhcceeehhhhhc
Confidence 111111 11 245788999998764 67765544444444333345677777665
No 329
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=85.56 E-value=1.3 Score=51.49 Aligned_cols=37 Identities=19% Similarity=0.184 Sum_probs=29.0
Q ss_pred HhhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCC
Q 002073 175 RLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 211 (972)
Q Consensus 175 kL~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d 211 (972)
.+...+|+|+|+|++|..++..|+..|--+|+++|.+
T Consensus 20 ~l~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~ 56 (467)
T 2axq_A 20 RHMGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRT 56 (467)
T ss_dssp ---CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESS
T ss_pred CCCCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECC
Confidence 3556789999999999999999999843379998753
No 330
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=85.46 E-value=0.95 Score=47.84 Aligned_cols=36 Identities=22% Similarity=0.580 Sum_probs=30.7
Q ss_pred HHhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 572 KLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 572 kL~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
.|.+++++|.|+ |+||.++++.|+..|. +++++|.+
T Consensus 17 ~l~~k~vlVTGas~gIG~aia~~l~~~G~------~V~~~~r~ 53 (266)
T 4egf_A 17 RLDGKRALITGATKGIGADIARAFAAAGA------RLVLSGRD 53 (266)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 366788999995 8899999999999998 78888754
No 331
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=85.46 E-value=1.2 Score=47.40 Aligned_cols=85 Identities=13% Similarity=0.233 Sum_probs=52.0
Q ss_pred HHhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCc
Q 002073 572 KLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRL 650 (972)
Q Consensus 572 kL~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~ 650 (972)
.+.+++++|.|+ ||||.++++.|+..|. +++++|... ..+.+.+++.+....+
T Consensus 26 ~~~~k~~lVTGas~GIG~aia~~la~~G~------~V~~~~~~~------------------~~~~~~~~~~~~~~~~-- 79 (280)
T 4da9_A 26 QKARPVAIVTGGRRGIGLGIARALAASGF------DIAITGIGD------------------AEGVAPVIAELSGLGA-- 79 (280)
T ss_dssp CCCCCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESCC------------------HHHHHHHHHHHHHTTC--
T ss_pred ccCCCEEEEecCCCHHHHHHHHHHHHCCC------eEEEEeCCC------------------HHHHHHHHHHHHhcCC--
Confidence 456778999995 8899999999999998 788887321 1234445555555443
Q ss_pred EEEEeecccCCCcc--cccc--hhccCCCcEEEEcc
Q 002073 651 NIEALQNRVGPETE--NVFD--DTFWENITCVINAL 682 (972)
Q Consensus 651 ~I~~~~~~v~~~~e--~i~~--~~f~~~~DvVi~al 682 (972)
++..+...++.... ..+. .+-+...|++|++.
T Consensus 80 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnA 115 (280)
T 4da9_A 80 RVIFLRADLADLSSHQATVDAVVAEFGRIDCLVNNA 115 (280)
T ss_dssp CEEEEECCTTSGGGHHHHHHHHHHHHSCCCEEEEEC
T ss_pred cEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 45555555553221 1111 01134677777764
No 332
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=85.45 E-value=2.3 Score=44.60 Aligned_cols=30 Identities=23% Similarity=0.245 Sum_probs=26.3
Q ss_pred eEEEEcCChHHHHHHHHHHHhcCCEEEEEeC
Q 002073 180 NILVSGMQGLGAEIAKNLILAGVKSVTLHDE 210 (972)
Q Consensus 180 ~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~ 210 (972)
+|.|||+|.+|..++++|...|. .|+++|.
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~-~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGV-EVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTC-EEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCC-eEEEeCC
Confidence 79999999999999999999997 6777543
No 333
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=85.43 E-value=1.8 Score=45.49 Aligned_cols=37 Identities=35% Similarity=0.491 Sum_probs=30.7
Q ss_pred HHHhhcCeEEEEc-CChHHHHHHHHHHHhcCCEEEEEeC
Q 002073 173 MRRLFASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDE 210 (972)
Q Consensus 173 q~kL~~s~VlIvG-~gGlG~EiaKNLvLaGVg~itLvD~ 210 (972)
|..|.+.+|+|.| .||+|.++|+.|+..|. +|.++|.
T Consensus 24 m~~l~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r 61 (262)
T 3rkr_A 24 MSSLSGQVAVVTGASRGIGAAIARKLGSLGA-RVVLTAR 61 (262)
T ss_dssp -CTTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred hhccCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEEC
Confidence 4557788999998 58999999999999998 5877764
No 334
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=85.42 E-value=1 Score=48.43 Aligned_cols=36 Identities=17% Similarity=0.309 Sum_probs=30.5
Q ss_pred HHhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 572 KLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 572 kL~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
.+.+++++|.|+ |+||.++++.|+..|. +++++|.+
T Consensus 31 ~l~~k~vlVTGas~gIG~aia~~L~~~G~------~V~~~~r~ 67 (291)
T 3cxt_A 31 SLKGKIALVTGASYGIGFAIASAYAKAGA------TIVFNDIN 67 (291)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 367788999995 8899999999999997 78887643
No 335
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=85.39 E-value=4.1 Score=46.86 Aligned_cols=121 Identities=10% Similarity=0.053 Sum_probs=65.0
Q ss_pred hhcCeEEEEc-CChHHHHHHHHHHHh---cCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEE
Q 002073 176 LFASNILVSG-MQGLGAEIAKNLILA---GVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLS 251 (972)
Q Consensus 176 L~~s~VlIvG-~gGlG~EiaKNLvLa---GVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~ 251 (972)
....+|||.| .|++|.++++.|... | .+|++++...-....+.+ +. +.......+ ..+.+.+.. .-.++
T Consensus 71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g-~~V~~l~R~~~~~~~~~~--l~--~~~~~~~~~-~~~~~~~~~-~~~v~ 143 (478)
T 4dqv_A 71 PELRTVLLTGATGFLGRYLVLELLRRLDVD-GRLICLVRAESDEDARRR--LE--KTFDSGDPE-LLRHFKELA-ADRLE 143 (478)
T ss_dssp SCCCEEEEECTTSHHHHHHHHHHHHHSCTT-CEEEEEECSSSHHHHHHH--HH--GGGCSSCHH-HHHHHHHHH-TTTEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhcCCCC-CEEEEEECCCCcHHHHHH--HH--HHHHhcchh-hhhhhhhhc-cCceE
Confidence 3567999999 489999999999998 4 478887743211000000 00 000000000 011111111 13556
Q ss_pred EeecCCC-------h----hhhcCCceEEEcCC-------------CHHHHHHHHHHHHhcCCCceeEEeeecceeE
Q 002073 252 TLTSKLT-------K----EQLSDFQAVVFTDI-------------SLDKAIEFDDFCHNHQPAISFIKAEVRGLFG 304 (972)
Q Consensus 252 ~~~~~l~-------~----e~l~~fdvVV~~~~-------------~~~~~~~ln~~c~~~~~~IpfI~a~~~G~~G 304 (972)
++..+++ . +.+.+.|+||-+.. +......+-+.|.+.+. ..||..++.+.+|
T Consensus 144 ~v~~Dl~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~-~~~V~iSS~~v~~ 219 (478)
T 4dqv_A 144 VVAGDKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKL-KPFTYVSTADVGA 219 (478)
T ss_dssp EEECCTTSGGGGCCHHHHHHHHHHCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSC-CCEEEEEEGGGGT
T ss_pred EEEeECCCcccCCCHHHHHHHHcCCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCC-CeEEEEeehhhcC
Confidence 6666653 1 23457788886532 23344567778888772 2788888876543
No 336
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=85.38 E-value=0.56 Score=49.69 Aligned_cols=35 Identities=31% Similarity=0.526 Sum_probs=29.9
Q ss_pred HHhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcC
Q 002073 572 KLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDD 612 (972)
Q Consensus 572 kL~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~ 612 (972)
++.+++|+|.|+ ||||.++++.|+..|. ++++++.
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~------~V~~~~r 61 (271)
T 4iin_A 26 QFTGKNVLITGASKGIGAEIAKTLASMGL------KVWINYR 61 (271)
T ss_dssp CCSCCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEeC
Confidence 456788999995 8999999999999998 7888764
No 337
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=85.30 E-value=4.7 Score=46.66 Aligned_cols=33 Identities=21% Similarity=0.278 Sum_probs=30.2
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCc
Q 002073 179 SNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGT 212 (972)
Q Consensus 179 s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~ 212 (972)
.+|.|||+|-.|+-||.+|+.+|. .|+++|.+.
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~-~V~l~D~~~ 87 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGI-ETFLVVRNE 87 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC-eEEEEECcH
Confidence 489999999999999999999998 899998654
No 338
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=85.27 E-value=0.76 Score=48.38 Aligned_cols=35 Identities=20% Similarity=0.449 Sum_probs=29.3
Q ss_pred HhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 573 LEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 573 L~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
+.+++++|.|+ |+||.++++.|+..|. +++++|.+
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~ 40 (267)
T 2gdz_A 5 VNGKVALVTGAAQGIGRAFAEALLLKGA------KVALVDWN 40 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCC------EEEEEECC
Confidence 34678999995 8999999999999997 78888643
No 339
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=85.26 E-value=1.2 Score=49.32 Aligned_cols=44 Identities=18% Similarity=0.221 Sum_probs=36.9
Q ss_pred cCHHHHHHhhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCc
Q 002073 168 YGRETMRRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGT 212 (972)
Q Consensus 168 ~G~e~q~kL~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~ 212 (972)
|.......|.+++|.|||+|.+|..+|+.|...|. +|+.+|...
T Consensus 130 W~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~~ 173 (324)
T 3hg7_A 130 WQSHPYQGLKGRTLLILGTGSIGQHIAHTGKHFGM-KVLGVSRSG 173 (324)
T ss_dssp CCCCCCCCSTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred CcCCCCcccccceEEEEEECHHHHHHHHHHHhCCC-EEEEEcCCh
Confidence 54333357889999999999999999999999998 788898755
No 340
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=85.25 E-value=0.54 Score=51.88 Aligned_cols=34 Identities=26% Similarity=0.397 Sum_probs=30.7
Q ss_pred cCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCc
Q 002073 575 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDV 614 (972)
Q Consensus 575 ~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~ 614 (972)
+.||+|||+|..|+.+|-.|++.|+ +++|+|.+.
T Consensus 1 sm~V~IVGaGpaGl~~A~~L~~~G~------~v~v~Er~~ 34 (412)
T 4hb9_A 1 SMHVGIIGAGIGGTCLAHGLRKHGI------KVTIYERNS 34 (412)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC------EEEEECSSC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCC------CEEEEecCC
Confidence 4689999999999999999999999 899998653
No 341
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=85.24 E-value=0.59 Score=50.88 Aligned_cols=33 Identities=24% Similarity=0.309 Sum_probs=28.2
Q ss_pred cCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 575 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 575 ~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
..||.|||+|++|+.++..|++.|. +++++|.+
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g~------~V~~~~r~ 34 (312)
T 3hn2_A 2 SLRIAIVGAGALGLYYGALLQRSGE------DVHFLLRR 34 (312)
T ss_dssp --CEEEECCSTTHHHHHHHHHHTSC------CEEEECST
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCC------eEEEEEcC
Confidence 3689999999999999999999986 78888754
No 342
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=85.22 E-value=1.2 Score=48.70 Aligned_cols=89 Identities=15% Similarity=0.177 Sum_probs=53.7
Q ss_pred HhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCcE
Q 002073 573 LEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLN 651 (972)
Q Consensus 573 L~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~~ 651 (972)
+.+++++|.|+ ||||.++++.|+..|. ++++++.+... ....+.+.+++.+....+ +
T Consensus 3 m~~k~vlVTGas~GIG~aia~~L~~~G~------~V~~~~r~~~~--------------r~~~~~~~l~~~~~~~~~--~ 60 (324)
T 3u9l_A 3 MSKKIILITGASSGFGRLTAEALAGAGH------RVYASMRDIVG--------------RNASNVEAIAGFARDNDV--D 60 (324)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHTTC------EEEEEESCTTT--------------TTHHHHHHHHHHHHHHTC--C
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEecCcccc--------------cCHHHHHHHHHHHHhcCC--c
Confidence 45678899995 8999999999999998 78777655422 123445555665555544 4
Q ss_pred EEEeecccCCCcc--cccc--hhccCCCcEEEEccC
Q 002073 652 IEALQNRVGPETE--NVFD--DTFWENITCVINALD 683 (972)
Q Consensus 652 I~~~~~~v~~~~e--~i~~--~~f~~~~DvVi~alD 683 (972)
+..+...++.... ..+. .+-+...|+||++..
T Consensus 61 ~~~~~~Dvtd~~~v~~~~~~~~~~~g~iD~lVnnAG 96 (324)
T 3u9l_A 61 LRTLELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAG 96 (324)
T ss_dssp EEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCC
T ss_pred EEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 5555555553211 1111 011347888888753
No 343
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=85.19 E-value=1.4 Score=48.33 Aligned_cols=35 Identities=20% Similarity=0.254 Sum_probs=31.5
Q ss_pred hcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 574 EDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 574 ~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
+..||.|||+|.+|+.++..|+..|+ ++++++|.+
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g~-----~~v~l~D~~ 41 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKEL-----ADVVLVDIP 41 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-----CEEEEECCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-----CeEEEEecc
Confidence 35689999999999999999999998 699999865
No 344
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=85.17 E-value=0.74 Score=48.33 Aligned_cols=35 Identities=14% Similarity=0.287 Sum_probs=29.3
Q ss_pred HhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 573 LEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 573 L~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
+.+++++|.|+ |+||.++++.|+..|. +++++|.+
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~ 38 (260)
T 2qq5_A 3 MNGQVCVVTGASRGIGRGIALQLCKAGA------TVYITGRH 38 (260)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC------EEEEEeCC
Confidence 55678888885 8999999999999997 78887643
No 345
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=85.12 E-value=3.3 Score=43.50 Aligned_cols=63 Identities=24% Similarity=0.289 Sum_probs=42.6
Q ss_pred HhhcCeEEEEc-CChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEe
Q 002073 175 RLFASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTL 253 (972)
Q Consensus 175 kL~~s~VlIvG-~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~ 253 (972)
.|.+++|+|.| .||+|.++|+.|+..|. +|.++|.+. .+.+.+.+.+.+..+...+..+
T Consensus 10 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~ 69 (267)
T 1iy8_A 10 RFTDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSS-------------------EGLEASKAAVLETAPDAEVLTT 69 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCH-------------------HHHHHHHHHHHHHCTTCCEEEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCH-------------------HHHHHHHHHHHhhcCCceEEEE
Confidence 36678899997 67999999999999997 677776421 2344455566665444445544
Q ss_pred ecCC
Q 002073 254 TSKL 257 (972)
Q Consensus 254 ~~~l 257 (972)
..++
T Consensus 70 ~~D~ 73 (267)
T 1iy8_A 70 VADV 73 (267)
T ss_dssp ECCT
T ss_pred EccC
Confidence 4444
No 346
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=85.04 E-value=2.4 Score=46.57 Aligned_cols=73 Identities=16% Similarity=0.015 Sum_probs=53.4
Q ss_pred hcCeEEEEcCChHHHHHHHHHHHh-cCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEeec
Q 002073 177 FASNILVSGMQGLGAEIAKNLILA-GVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTS 255 (972)
Q Consensus 177 ~~s~VlIvG~gGlG~EiaKNLvLa-GVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~~ 255 (972)
...+|+|+|+|+.|..++++|... ++.+++++|.+ ..|++..++++.+.. +.+. . .
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~-------------------~~~a~~la~~~~~~~--~~~~-~-~ 180 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVR-------------------EKAAKKFVSYCEDRG--ISAS-V-Q 180 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSS-------------------HHHHHHHHHHHHHTT--CCEE-E-C
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCC-------------------HHHHHHHHHHHHhcC--ceEE-E-C
Confidence 467999999999999999999874 68999998742 247777777776532 3443 2 2
Q ss_pred CCChhhhcCCceEEEcCCC
Q 002073 256 KLTKEQLSDFQAVVFTDIS 274 (972)
Q Consensus 256 ~l~~e~l~~fdvVV~~~~~ 274 (972)
++ ++.+ ++|+||.|+.+
T Consensus 181 ~~-~e~v-~aDvVi~aTp~ 197 (322)
T 1omo_A 181 PA-EEAS-RCDVLVTTTPS 197 (322)
T ss_dssp CH-HHHT-SSSEEEECCCC
T ss_pred CH-HHHh-CCCEEEEeeCC
Confidence 22 3456 89999998864
No 347
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=85.03 E-value=1.2 Score=48.90 Aligned_cols=80 Identities=20% Similarity=0.281 Sum_probs=52.3
Q ss_pred HhcCcEEEEcC-CcchHHHHHHHHHc-cccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCc
Q 002073 573 LEDAKVFIVGS-GALGCEFLKNVALM-GVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRL 650 (972)
Q Consensus 573 L~~~kVlIVGa-GgiG~e~lknLa~~-Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~ 650 (972)
+++++|+|.|+ |+||.++++.|+.. |. .+++++|.+. .|...+++.+. ..
T Consensus 19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~-----~~V~~~~r~~-------------------~~~~~~~~~~~----~~ 70 (344)
T 2gn4_A 19 LDNQTILITGGTGSFGKCFVRKVLDTTNA-----KKIIVYSRDE-------------------LKQSEMAMEFN----DP 70 (344)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHHCCC-----SEEEEEESCH-------------------HHHHHHHHHHC----CT
T ss_pred hCCCEEEEECCCcHHHHHHHHHHHhhCCC-----CEEEEEECCh-------------------hhHHHHHHHhc----CC
Confidence 45689999995 99999999999999 87 6888886542 22333333332 12
Q ss_pred EEEEeecccCCCcccccchhccCCCcEEEEccC
Q 002073 651 NIEALQNRVGPETENVFDDTFWENITCVINALD 683 (972)
Q Consensus 651 ~I~~~~~~v~~~~e~i~~~~f~~~~DvVi~alD 683 (972)
++..+...+... +.+ ...++++|+||++..
T Consensus 71 ~v~~~~~Dl~d~-~~l--~~~~~~~D~Vih~Aa 100 (344)
T 2gn4_A 71 RMRFFIGDVRDL-ERL--NYALEGVDICIHAAA 100 (344)
T ss_dssp TEEEEECCTTCH-HHH--HHHTTTCSEEEECCC
T ss_pred CEEEEECCCCCH-HHH--HHHHhcCCEEEECCC
Confidence 455565555532 111 245678999999764
No 348
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=85.03 E-value=3.7 Score=44.42 Aligned_cols=36 Identities=22% Similarity=0.282 Sum_probs=28.7
Q ss_pred HhhcCeEEEEc-CChHHHHHHHHHHHhcCCEEEEEeCC
Q 002073 175 RLFASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEG 211 (972)
Q Consensus 175 kL~~s~VlIvG-~gGlG~EiaKNLvLaGVg~itLvD~d 211 (972)
.+...+|||.| .|++|..+++.|...|. +|+++|..
T Consensus 18 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~ 54 (333)
T 2q1w_A 18 GSHMKKVFITGICGQIGSHIAELLLERGD-KVVGIDNF 54 (333)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEECC
Confidence 34457899998 68999999999999994 78888764
No 349
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=85.02 E-value=4.2 Score=47.26 Aligned_cols=35 Identities=29% Similarity=0.264 Sum_probs=30.7
Q ss_pred hcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCc
Q 002073 177 FASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGT 212 (972)
Q Consensus 177 ~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~ 212 (972)
.-.+|.|||+|.+|..||.+|+.+|. .|+++|.+.
T Consensus 4 ~~~kVgVIGaG~MG~~IA~~la~aG~-~V~l~D~~~ 38 (483)
T 3mog_A 4 NVQTVAVIGSGTMGAGIAEVAASHGH-QVLLYDISA 38 (483)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTC-CEEEECSCH
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-eEEEEECCH
Confidence 34689999999999999999999998 799998643
No 350
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=84.99 E-value=1.3 Score=47.06 Aligned_cols=40 Identities=15% Similarity=0.253 Sum_probs=33.1
Q ss_pred HHHHHHhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 568 KLQKKLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 568 ~~q~kL~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
.....|++++++|.|+ ||||.++++.|+..|. +++++|.+
T Consensus 26 ~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~------~V~~~~r~ 66 (275)
T 4imr_A 26 ETIFGLRGRTALVTGSSRGIGAAIAEGLAGAGA------HVILHGVK 66 (275)
T ss_dssp HHHHCCTTCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred cccCCCCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEcCC
Confidence 3445678889999995 8999999999999998 78888753
No 351
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=84.97 E-value=2.7 Score=46.08 Aligned_cols=87 Identities=17% Similarity=0.164 Sum_probs=56.3
Q ss_pred CeEEEEcCChHHHH-HHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEeecCC
Q 002073 179 SNILVSGMQGLGAE-IAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKL 257 (972)
Q Consensus 179 s~VlIvG~gGlG~E-iaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~~~l 257 (972)
.+|.++|.||.|.. +|+.|...|. .|++.|...-. + ..+.|++. .+.+.. + .
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~-~V~~~D~~~~~-----------------~----~~~~L~~~--gi~v~~--g-~ 57 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGF-EVSGCDAKMYP-----------------P----MSTQLEAL--GIDVYE--G-F 57 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTC-EEEEEESSCCT-----------------T----HHHHHHHT--TCEEEE--S-C
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCC-EEEEEcCCCCc-----------------H----HHHHHHhC--CCEEEC--C-C
Confidence 58999999999996 9999999997 79999864310 0 23456555 345442 2 2
Q ss_pred Chhhh--cCCceEEEcCC-CHHHHHHHHHHHHhcCCCceeEE
Q 002073 258 TKEQL--SDFQAVVFTDI-SLDKAIEFDDFCHNHQPAISFIK 296 (972)
Q Consensus 258 ~~e~l--~~fdvVV~~~~-~~~~~~~ln~~c~~~~~~IpfI~ 296 (972)
+++.+ .++|+||.+.. +.... .-+.+++++ ||++.
T Consensus 58 ~~~~l~~~~~d~vV~Spgi~~~~p--~~~~a~~~g--i~v~~ 95 (326)
T 3eag_A 58 DAAQLDEFKADVYVIGNVAKRGMD--VVEAILNLG--LPYIS 95 (326)
T ss_dssp CGGGGGSCCCSEEEECTTCCTTCH--HHHHHHHTT--CCEEE
T ss_pred CHHHcCCCCCCEEEECCCcCCCCH--HHHHHHHcC--CcEEe
Confidence 33444 47999998753 22111 123467888 88774
No 352
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=84.97 E-value=3 Score=44.19 Aligned_cols=35 Identities=31% Similarity=0.499 Sum_probs=30.2
Q ss_pred HhhcCeEEEEc-CChHHHHHHHHHHHhcCCEEEEEeC
Q 002073 175 RLFASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDE 210 (972)
Q Consensus 175 kL~~s~VlIvG-~gGlG~EiaKNLvLaGVg~itLvD~ 210 (972)
.|.+++|+|.| .||+|.++|+.|+..|. +|.++|.
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r 43 (281)
T 3svt_A 8 SFQDRTYLVTGGGSGIGKGVAAGLVAAGA-SVMIVGR 43 (281)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CcCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 56788999997 68999999999999998 6888774
No 353
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=84.92 E-value=1.2 Score=49.91 Aligned_cols=35 Identities=23% Similarity=0.312 Sum_probs=32.3
Q ss_pred HhhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeC
Q 002073 175 RLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDE 210 (972)
Q Consensus 175 kL~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~ 210 (972)
.+...+|+|+|+|++|..+++.+...|. +|+++|.
T Consensus 163 ~l~~~~V~ViGaG~iG~~~a~~l~~~Ga-~V~~~d~ 197 (369)
T 2eez_A 163 GVAPASVVILGGGTVGTNAAKIALGMGA-QVTILDV 197 (369)
T ss_dssp BBCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEEC
Confidence 4778999999999999999999999999 8999885
No 354
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=84.89 E-value=1.8 Score=47.27 Aligned_cols=73 Identities=27% Similarity=0.262 Sum_probs=50.0
Q ss_pred CcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhC---CCcEE
Q 002073 576 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSIN---PRLNI 652 (972)
Q Consensus 576 ~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~in---P~~~I 652 (972)
.||.|||+|.+|..++-.|+..|+. ++|.++|-|. .|++..+..+.+.. ..+++
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~----~el~L~Di~~-------------------~k~~g~a~dl~~~~~~~~~~~v 57 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVA----REVVLVDLDR-------------------KLAQAHAEDILHATPFAHPVWV 57 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCC----SEEEEECSSH-------------------HHHHHHHHHHHTTGGGSCCCEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCC----CEEEEEeCCh-------------------hHHHHHHHHHHHhHhhcCCeEE
Confidence 4799999999999999999998863 6899998542 34444344444432 34555
Q ss_pred EEeecccCCCcccccchhccCCCcEEEEccC
Q 002073 653 EALQNRVGPETENVFDDTFWENITCVINALD 683 (972)
Q Consensus 653 ~~~~~~v~~~~e~i~~~~f~~~~DvVi~alD 683 (972)
++ +. .+-+++.|+||.+..
T Consensus 58 ~~-----~~-------~~a~~~aD~Vii~ag 76 (310)
T 2xxj_A 58 WA-----GS-------YGDLEGARAVVLAAG 76 (310)
T ss_dssp EE-----CC-------GGGGTTEEEEEECCC
T ss_pred EE-----CC-------HHHhCCCCEEEECCC
Confidence 53 11 122679999999864
No 355
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=84.81 E-value=2.1 Score=46.94 Aligned_cols=34 Identities=26% Similarity=0.408 Sum_probs=29.4
Q ss_pred CcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 576 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 576 ~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
.||.|||+|.+|+.++..|+..|.. ++++++|.+
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~----~~V~l~D~~ 34 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFA----REMVLIDVD 34 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCC----SEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCC----CeEEEEeCC
Confidence 3799999999999999999999862 589998754
No 356
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=84.81 E-value=2.5 Score=46.08 Aligned_cols=33 Identities=24% Similarity=0.367 Sum_probs=29.2
Q ss_pred CcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 576 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 576 ~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
.||.|||+|.+|..++..|+..|. ..++++|-|
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~-----~~v~L~Di~ 35 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKEL-----GDIVLLDIV 35 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-----SEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC-----CeEEEEeCC
Confidence 589999999999999999999996 359999865
No 357
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=84.80 E-value=0.59 Score=51.08 Aligned_cols=34 Identities=18% Similarity=0.383 Sum_probs=29.5
Q ss_pred cCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCc
Q 002073 575 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDV 614 (972)
Q Consensus 575 ~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~ 614 (972)
..||+|||+|++|+.++..|++.|. +++++|.+.
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g~------~V~~~~r~~ 35 (320)
T 3i83_A 2 SLNILVIGTGAIGSFYGALLAKTGH------CVSVVSRSD 35 (320)
T ss_dssp -CEEEEESCCHHHHHHHHHHHHTTC------EEEEECSTT
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCC------eEEEEeCCh
Confidence 3689999999999999999999986 888887653
No 358
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=84.79 E-value=0.47 Score=51.66 Aligned_cols=34 Identities=24% Similarity=0.306 Sum_probs=30.1
Q ss_pred cCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCc
Q 002073 575 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDV 614 (972)
Q Consensus 575 ~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~ 614 (972)
-.+|.|||+|.+|+.++++|+..|. +++++|.+.
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~G~------~V~~~dr~~ 54 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKNGF------KVTVWNRTL 54 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTC------EEEEECSSG
T ss_pred CCEEEEECccHHHHHHHHHHHHCCC------eEEEEeCCH
Confidence 4689999999999999999999997 888887653
No 359
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=84.77 E-value=1.6 Score=50.31 Aligned_cols=34 Identities=21% Similarity=0.211 Sum_probs=28.5
Q ss_pred hcCcEEEEcC-CcchHHHHHHHHHc---cccCCCCceEEEEcCC
Q 002073 574 EDAKVFIVGS-GALGCEFLKNVALM---GVSCGNQGKLTITDDD 613 (972)
Q Consensus 574 ~~~kVlIVGa-GgiG~e~lknLa~~---Gv~~~~~g~i~iiD~D 613 (972)
..++|+|.|+ |.||+++++.|+.. |. ++++++..
T Consensus 72 ~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~------~V~~l~R~ 109 (478)
T 4dqv_A 72 ELRTVLLTGATGFLGRYLVLELLRRLDVDG------RLICLVRA 109 (478)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHHSCTTC------EEEEEECS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhcCCCCC------EEEEEECC
Confidence 4678999996 88999999999998 54 88888653
No 360
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=84.77 E-value=2.3 Score=47.39 Aligned_cols=33 Identities=24% Similarity=0.246 Sum_probs=29.2
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCC
Q 002073 178 ASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 211 (972)
Q Consensus 178 ~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d 211 (972)
..+|.|+|+|.+|+.+|+.|+..|. .++++|.+
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~-~V~l~~r~ 61 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQ-KVRLWSYE 61 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTC-CEEEECSC
T ss_pred CCeEEEECccHHHHHHHHHHHHCCC-eEEEEeCC
Confidence 3589999999999999999999995 68888864
No 361
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=84.77 E-value=0.41 Score=52.14 Aligned_cols=44 Identities=16% Similarity=0.296 Sum_probs=36.4
Q ss_pred cCHHHHHHhhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCc
Q 002073 168 YGRETMRRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGT 212 (972)
Q Consensus 168 ~G~e~q~kL~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~ 212 (972)
|.......|.+++|.|+|+|.+|..+|+.|...|. +|+.+|...
T Consensus 112 w~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~~ 155 (290)
T 3gvx_A 112 FRQSPTTLLYGKALGILGYGGIGRRVAHLAKAFGM-RVIAYTRSS 155 (290)
T ss_dssp CCCCCCCCCTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEECSSC
T ss_pred cccCCceeeecchheeeccCchhHHHHHHHHhhCc-EEEEEeccc
Confidence 43333356889999999999999999999999998 788888654
No 362
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=84.71 E-value=1.1 Score=48.59 Aligned_cols=30 Identities=23% Similarity=0.068 Sum_probs=26.9
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcCCEEEEEeC
Q 002073 179 SNILVSGMQGLGAEIAKNLILAGVKSVTLHDE 210 (972)
Q Consensus 179 s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~ 210 (972)
.+|+|+|+|++|+.++..|. +|. .|++++.
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~-~V~~~~r 32 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYH-DVTVVTR 32 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTS-EEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHh-cCC-ceEEEEC
Confidence 58999999999999999999 884 7888875
No 363
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=84.69 E-value=0.67 Score=50.09 Aligned_cols=34 Identities=21% Similarity=0.165 Sum_probs=30.2
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCc
Q 002073 178 ASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGT 212 (972)
Q Consensus 178 ~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~ 212 (972)
..+|.|||+|.+|..+|++|...|. .|+++|.+.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~-~V~~~dr~~ 48 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPG-GVTVYDIRI 48 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTT-CEEEECSST
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCH
Confidence 4589999999999999999999996 789998654
No 364
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=84.67 E-value=5.1 Score=43.53 Aligned_cols=36 Identities=17% Similarity=0.048 Sum_probs=31.1
Q ss_pred HhhcCeEEEEc-CChHHHHHHHHHHHhcCCEEEEEeCC
Q 002073 175 RLFASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEG 211 (972)
Q Consensus 175 kL~~s~VlIvG-~gGlG~EiaKNLvLaGVg~itLvD~d 211 (972)
.|.+.+|||.| .|++|..+++.|...|. +|+++|..
T Consensus 6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 42 (357)
T 1rkx_A 6 FWQGKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLT 42 (357)
T ss_dssp HHTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred hhCCCEEEEECCCchHHHHHHHHHHhCCC-eEEEEeCC
Confidence 46778999999 59999999999999996 78888764
No 365
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=84.65 E-value=3.8 Score=43.29 Aligned_cols=41 Identities=24% Similarity=0.405 Sum_probs=32.7
Q ss_pred HHHHHHhhcCeEEEEc-CChHHHHHHHHHHHhcCCEEEEEeCC
Q 002073 170 RETMRRLFASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEG 211 (972)
Q Consensus 170 ~e~q~kL~~s~VlIvG-~gGlG~EiaKNLvLaGVg~itLvD~d 211 (972)
...|..|++++|+|.| .||+|.++|+.|+..|. +|.++|.+
T Consensus 2 p~~m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~ 43 (281)
T 3s55_A 2 PGSMADFEGKTALITGGARGMGRSHAVALAEAGA-DIAICDRC 43 (281)
T ss_dssp ----CTTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred CCcccccCCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCC
Confidence 3456678899999997 67999999999999998 58888864
No 366
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=84.65 E-value=3 Score=43.32 Aligned_cols=35 Identities=20% Similarity=0.488 Sum_probs=30.2
Q ss_pred hhcCeEEEEc-CChHHHHHHHHHHHhcCCEEEEEeC
Q 002073 176 LFASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDE 210 (972)
Q Consensus 176 L~~s~VlIvG-~gGlG~EiaKNLvLaGVg~itLvD~ 210 (972)
|++++|+|.| .||+|.++|+.|+..|...+.++|.
T Consensus 3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r 38 (254)
T 1sby_A 3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDR 38 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEES
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEec
Confidence 5677899997 6799999999999999877888774
No 367
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=84.59 E-value=0.86 Score=51.58 Aligned_cols=38 Identities=32% Similarity=0.392 Sum_probs=35.9
Q ss_pred HhhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCc
Q 002073 175 RLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGT 212 (972)
Q Consensus 175 kL~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~ 212 (972)
+++..+|+|+|.|..|..+|+.|+.+|+++|+++|..-
T Consensus 185 ~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 185 SLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp CTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 67889999999999999999999999999999999874
No 368
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=84.57 E-value=2.1 Score=46.94 Aligned_cols=37 Identities=27% Similarity=0.513 Sum_probs=31.4
Q ss_pred HhcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 573 LEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 573 L~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
....||.|||+|.+|..++..|+..|+. .+|.++|-|
T Consensus 4 m~~~KI~IIGaG~vG~~la~~l~~~~~~----~ei~L~Di~ 40 (317)
T 3d0o_A 4 FKGNKVVLIGNGAVGSSYAFSLVNQSIV----DELVIIDLD 40 (317)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSC----SEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCC----CEEEEEeCC
Confidence 3457999999999999999999988863 589999854
No 369
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=84.54 E-value=0.92 Score=47.23 Aligned_cols=33 Identities=12% Similarity=0.319 Sum_probs=28.0
Q ss_pred cCcEEEEcC-CcchHHHHHHHHH-ccccCCCCceEEEEcCC
Q 002073 575 DAKVFIVGS-GALGCEFLKNVAL-MGVSCGNQGKLTITDDD 613 (972)
Q Consensus 575 ~~kVlIVGa-GgiG~e~lknLa~-~Gv~~~~~g~i~iiD~D 613 (972)
.++|+|.|+ |+||.++++.|+. .|. ++++++.+
T Consensus 4 ~k~vlITGasggIG~~~a~~L~~~~g~------~V~~~~r~ 38 (276)
T 1wma_A 4 IHVALVTGGNKGIGLAIVRDLCRLFSG------DVVLTARD 38 (276)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHHSSS------EEEEEESS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHhcCC------eEEEEeCC
Confidence 567889985 8999999999999 897 78888754
No 370
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=84.36 E-value=0.92 Score=47.81 Aligned_cols=30 Identities=20% Similarity=0.369 Sum_probs=24.2
Q ss_pred HHHHhcCcEEEEcC-CcchHHHHHHHHHccc
Q 002073 570 QKKLEDAKVFIVGS-GALGCEFLKNVALMGV 599 (972)
Q Consensus 570 q~kL~~~kVlIVGa-GgiG~e~lknLa~~Gv 599 (972)
+..+.+++|+|.|+ ||||.++++.|+..|.
T Consensus 21 ~~~l~~k~vlVTGas~gIG~~la~~l~~~G~ 51 (267)
T 4iiu_A 21 QSNAMSRSVLVTGASKGIGRAIARQLAADGF 51 (267)
T ss_dssp ----CCCEEEETTTTSHHHHHHHHHHHHTTC
T ss_pred ccccCCCEEEEECCCChHHHHHHHHHHHCCC
Confidence 45677889999995 8899999999999998
No 371
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=84.32 E-value=1.8 Score=44.39 Aligned_cols=33 Identities=18% Similarity=0.256 Sum_probs=27.7
Q ss_pred cCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 575 DAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 575 ~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
.++++|.|+ |+||.++++.|+..|. +++++|.+
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~------~V~~~~r~ 35 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGY------ALALGARS 35 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 467899995 8899999999999998 78887643
No 372
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=84.25 E-value=2 Score=47.24 Aligned_cols=34 Identities=26% Similarity=0.433 Sum_probs=29.8
Q ss_pred CcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 576 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 576 ~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
.||.|+|+|.+|+.++..|+..|+. .+++++|.+
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~----~el~l~D~~ 34 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVA----KEVVMVDIK 34 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCS----SEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCC----CEEEEEeCc
Confidence 3799999999999999999999983 589999854
No 373
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=84.15 E-value=1 Score=49.08 Aligned_cols=73 Identities=18% Similarity=0.205 Sum_probs=48.3
Q ss_pred HHHhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCC
Q 002073 571 KKLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPR 649 (972)
Q Consensus 571 ~kL~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~ 649 (972)
..+.+++++|.|+ ||||.++++.|+..|. +++++|.+.- +.|. ..-...+.+.+++.+....+
T Consensus 23 ~~l~gk~vlVTGas~GIG~aia~~la~~G~------~Vv~~~r~~~----~~~~-----~~~~~~~~~~~~~~~~~~~~- 86 (322)
T 3qlj_A 23 GVVDGRVVIVTGAGGGIGRAHALAFAAEGA------RVVVNDIGVG----LDGS-----PASGGSAAQSVVDEITAAGG- 86 (322)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTC------EEEEECCCBC----TTSS-----BTCTTSHHHHHHHHHHHTTC-
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEeCccc----cccc-----ccccHHHHHHHHHHHHhcCC-
Confidence 3467888999995 8899999999999998 8999887631 1111 11123455566666665543
Q ss_pred cEEEEeecccC
Q 002073 650 LNIEALQNRVG 660 (972)
Q Consensus 650 ~~I~~~~~~v~ 660 (972)
++..+...++
T Consensus 87 -~~~~~~~Dv~ 96 (322)
T 3qlj_A 87 -EAVADGSNVA 96 (322)
T ss_dssp -EEEEECCCTT
T ss_pred -cEEEEECCCC
Confidence 5555555554
No 374
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=84.13 E-value=0.69 Score=48.60 Aligned_cols=36 Identities=22% Similarity=0.399 Sum_probs=30.5
Q ss_pred HHhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 572 KLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 572 kL~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
.|++++++|.|+ ||||.++++.|+..|. +++++|.+
T Consensus 3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~------~V~~~~r~ 39 (257)
T 3imf_A 3 AMKEKVVIITGGSSGMGKGMATRFAKEGA------RVVITGRT 39 (257)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 466788999995 8899999999999998 78888743
No 375
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=84.13 E-value=3.4 Score=42.75 Aligned_cols=35 Identities=29% Similarity=0.376 Sum_probs=30.0
Q ss_pred HhhcCeEEEEc-CChHHHHHHHHHHHhcCCEEEEEeC
Q 002073 175 RLFASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDE 210 (972)
Q Consensus 175 kL~~s~VlIvG-~gGlG~EiaKNLvLaGVg~itLvD~ 210 (972)
+|++++|+|.| .||+|.++|+.|+..|. ++.++|.
T Consensus 6 ~~~~k~vlITGas~giG~~~a~~l~~~G~-~V~~~~r 41 (253)
T 3qiv_A 6 RFENKVGIVTGSGGGIGQAYAEALAREGA-AVVVADI 41 (253)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcC
Confidence 46788999998 58999999999999998 5888764
No 376
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=84.09 E-value=1.1 Score=47.00 Aligned_cols=32 Identities=16% Similarity=0.253 Sum_probs=28.3
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcC---CEEEEEeC
Q 002073 179 SNILVSGMQGLGAEIAKNLILAGV---KSVTLHDE 210 (972)
Q Consensus 179 s~VlIvG~gGlG~EiaKNLvLaGV---g~itLvD~ 210 (972)
.+|.|||+|.+|..++++|...|. ..|+++|.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r 37 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDL 37 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECS
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeC
Confidence 589999999999999999999996 47888774
No 377
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=84.07 E-value=1.5 Score=47.03 Aligned_cols=31 Identities=29% Similarity=0.408 Sum_probs=26.9
Q ss_pred eEEEEcCChHHHHHHHHHHHh-----cCCEEEEEeC
Q 002073 180 NILVSGMQGLGAEIAKNLILA-----GVKSVTLHDE 210 (972)
Q Consensus 180 ~VlIvG~gGlG~EiaKNLvLa-----GVg~itLvD~ 210 (972)
+|+|+|+|.+|+.+|..|..+ |-..|+++|.
T Consensus 10 ~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 10 KIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 799999999999999999999 7237888763
No 378
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=84.06 E-value=4.3 Score=43.68 Aligned_cols=104 Identities=11% Similarity=0.198 Sum_probs=60.6
Q ss_pred CeEEEEc-CChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEeecCC
Q 002073 179 SNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKL 257 (972)
Q Consensus 179 s~VlIvG-~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~~~l 257 (972)
.+|||.| .|++|..+++.|...|. +|+++|...-. ......+.|.. .+ .++....++
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~------------------~~~~~~~~l~~-~~--~~~~~~~Dl 59 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQGI-DLIVFDNLSRK------------------GATDNLHWLSS-LG--NFEFVHGDI 59 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCST------------------THHHHHHHHHT-TC--CCEEEECCT
T ss_pred cEEEEeCCCchhHHHHHHHHHhCCC-EEEEEeCCCcc------------------Cchhhhhhhcc-CC--ceEEEEcCC
Confidence 3799998 68999999999999995 78887742100 01111222322 12 344445555
Q ss_pred Ch-----hhhcC--CceEEEcCCC--H-------H--------HHHHHHHHHHhcCCCceeEEeeecceeE
Q 002073 258 TK-----EQLSD--FQAVVFTDIS--L-------D--------KAIEFDDFCHNHQPAISFIKAEVRGLFG 304 (972)
Q Consensus 258 ~~-----e~l~~--fdvVV~~~~~--~-------~--------~~~~ln~~c~~~~~~IpfI~a~~~G~~G 304 (972)
++ +.+++ .|+||-+... . . ....+-+.|++.+.+..||..++.+.+|
T Consensus 60 ~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g 130 (347)
T 1orr_A 60 RNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYG 130 (347)
T ss_dssp TCHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGT
T ss_pred CCHHHHHHHHhccCCCEEEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhC
Confidence 32 24555 8888876431 1 1 1234556788877211488888776654
No 379
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=84.04 E-value=1.2 Score=47.78 Aligned_cols=36 Identities=17% Similarity=0.209 Sum_probs=29.7
Q ss_pred HHhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 572 KLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 572 kL~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
.+.++.++|.|+ ||||.++++.|+..|. +++++|.+
T Consensus 25 ~~~~k~~lVTGas~GIG~aia~~la~~G~------~V~~~~r~ 61 (283)
T 3v8b_A 25 NQPSPVALITGAGSGIGRATALALAADGV------TVGALGRT 61 (283)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 467788999995 8899999999999998 88888753
No 380
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=84.03 E-value=1.4 Score=48.39 Aligned_cols=73 Identities=10% Similarity=0.120 Sum_probs=50.2
Q ss_pred hcCcEEEEcCCcchHHHHHHHHHc-cccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCcEE
Q 002073 574 EDAKVFIVGSGALGCEFLKNVALM-GVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNI 652 (972)
Q Consensus 574 ~~~kVlIVGaGgiG~e~lknLa~~-Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~~I 652 (972)
...++.|||+|++|..+++.|... ++ .++.+.|.+ ..|++.+++.+.... +.+
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~~~~-----~~V~v~~r~-------------------~~~a~~la~~~~~~~--~~~ 177 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRVFDI-----GEVKAYDVR-------------------EKAAKKFVSYCEDRG--ISA 177 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCC-----CEEEEECSS-------------------HHHHHHHHHHHHHTT--CCE
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhCCc-----cEEEEECCC-------------------HHHHHHHHHHHHhcC--ceE
Confidence 467899999999999999999874 56 688887643 246777777665421 233
Q ss_pred EEeecccCCCcccccchhccCCCcEEEEccCC
Q 002073 653 EALQNRVGPETENVFDDTFWENITCVINALDN 684 (972)
Q Consensus 653 ~~~~~~v~~~~e~i~~~~f~~~~DvVi~alDn 684 (972)
. +. + . .+.. ++|+|++|+-+
T Consensus 178 ~-~~-----~----~-~e~v-~aDvVi~aTp~ 197 (322)
T 1omo_A 178 S-VQ-----P----A-EEAS-RCDVLVTTTPS 197 (322)
T ss_dssp E-EC-----C----H-HHHT-SSSEEEECCCC
T ss_pred E-EC-----C----H-HHHh-CCCEEEEeeCC
Confidence 2 21 1 1 2334 79999999864
No 381
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=84.01 E-value=2.1 Score=45.66 Aligned_cols=32 Identities=19% Similarity=0.159 Sum_probs=27.3
Q ss_pred cCeEEEEcC-ChHHHHHHHHHHHhcCCEEEEEeC
Q 002073 178 ASNILVSGM-QGLGAEIAKNLILAGVKSVTLHDE 210 (972)
Q Consensus 178 ~s~VlIvG~-gGlG~EiaKNLvLaGVg~itLvD~ 210 (972)
+.+|||.|. |++|..+++.|...|. +|+++|.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r 34 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNW-HAVGCGF 34 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEC-
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCC-eEEEEcc
Confidence 468999996 8999999999999994 7888874
No 382
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=83.98 E-value=3 Score=43.34 Aligned_cols=32 Identities=19% Similarity=0.187 Sum_probs=28.1
Q ss_pred eEEEEcCChHHHHHHHHHHHhcCCEEEEEeCC
Q 002073 180 NILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 211 (972)
Q Consensus 180 ~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d 211 (972)
+|.|+|+|.+|..++++|...|+.-+.++|.+
T Consensus 2 ~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~ 33 (236)
T 2dc1_A 2 LVGLIGYGAIGKFLAEWLERNGFEIAAILDVR 33 (236)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHhcCCCEEEEEEecC
Confidence 79999999999999999998888555788865
No 383
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=83.96 E-value=1 Score=47.95 Aligned_cols=36 Identities=17% Similarity=0.253 Sum_probs=30.2
Q ss_pred HHhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 572 KLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 572 kL~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
.|.+++++|.|+ ||||.++++.|+..|. +++++|.+
T Consensus 25 ~l~~k~~lVTGas~GIG~aia~~la~~G~------~V~~~~r~ 61 (270)
T 3ftp_A 25 TLDKQVAIVTGASRGIGRAIALELARRGA------MVIGTATT 61 (270)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 467788888885 8899999999999998 78887643
No 384
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=83.95 E-value=2.6 Score=44.54 Aligned_cols=93 Identities=17% Similarity=0.160 Sum_probs=0.0
Q ss_pred CHHHHHHhhcCeEEEEc-CChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCC
Q 002073 169 GRETMRRLFASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNA 247 (972)
Q Consensus 169 G~e~q~kL~~s~VlIvG-~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~ 247 (972)
|...|..|++++|+|.| .+|+|.++|+.|+..|. +|.++|...-...+-... -...+.+.....+.+.++
T Consensus 1 ~p~~m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~- 71 (287)
T 3pxx_A 1 GPGSMGRVQDKVVLVTGGARGQGRSHAVKLAEEGA-DIILFDICHDIETNEYPL-------ATSRDLEEAGLEVEKTGR- 71 (287)
T ss_dssp CTTSCCTTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTSCSCC-------CCHHHHHHHHHHHHHTTS-
T ss_pred CCCcccccCCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcccccccccccch-------hhhHHHHHHHHHHHhcCC-
Q ss_pred CEEEEeecCCCh------------hhhcCCceEEEc
Q 002073 248 VVLSTLTSKLTK------------EQLSDFQAVVFT 271 (972)
Q Consensus 248 V~V~~~~~~l~~------------e~l~~fdvVV~~ 271 (972)
++..+..++++ +.+...|+||.+
T Consensus 72 -~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~n 106 (287)
T 3pxx_A 72 -KAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVAN 106 (287)
T ss_dssp -CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred -ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
No 385
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=83.94 E-value=4.2 Score=43.89 Aligned_cols=109 Identities=17% Similarity=0.246 Sum_probs=62.2
Q ss_pred cCeEEEEc-CChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHh-cCCCEEEEeec
Q 002073 178 ASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQEL-NNAVVLSTLTS 255 (972)
Q Consensus 178 ~s~VlIvG-~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eL-Np~V~V~~~~~ 255 (972)
+.+|||.| .|++|..+++.|...|. +|+++|...-...+.. . ... ..+.+.++ .+ .++.+..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~r~~~--------~-~~~----~~~~l~~~~~~--~~~~~~~ 65 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGY-LPVVIDNFHNAFRGGG--------S-LPE----SLRRVQELTGR--SVEFEEM 65 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTC-CEEEEECSSSSCBCSS--------S-SBH----HHHHHHHHHTC--CCEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecCCccccccc--------c-cHH----HHHHHHhccCC--ceEEEEC
Confidence 36899998 59999999999999995 6777775321111100 0 011 12233332 22 3444455
Q ss_pred CCCh-----hhhc--CCceEEEcCCC--H---------------HHHHHHHHHHHhcCCCc-eeEEeeecceeE
Q 002073 256 KLTK-----EQLS--DFQAVVFTDIS--L---------------DKAIEFDDFCHNHQPAI-SFIKAEVRGLFG 304 (972)
Q Consensus 256 ~l~~-----e~l~--~fdvVV~~~~~--~---------------~~~~~ln~~c~~~~~~I-pfI~a~~~G~~G 304 (972)
++++ +.++ +.|+||.+... . .....+-+.|++.+ + .||.+++.+.+|
T Consensus 66 D~~~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~iv~~SS~~~~g 137 (348)
T 1ek6_A 66 DILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG--VKNLVFSSSATVYG 137 (348)
T ss_dssp CTTCHHHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT--CCEEEEEEEGGGGC
T ss_pred CCCCHHHHHHHHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhC--CCEEEEECcHHHhC
Confidence 5543 2344 67888876431 1 11234456777776 4 688888776654
No 386
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=83.86 E-value=1.4 Score=46.44 Aligned_cols=86 Identities=20% Similarity=0.303 Sum_probs=52.9
Q ss_pred HhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCcE
Q 002073 573 LEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLN 651 (972)
Q Consensus 573 L~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~~ 651 (972)
+.+++++|.|+ ||||.++++.|+..|. +++++|... ....+.+.+++.+.... .+
T Consensus 9 l~~k~vlVTGas~GIG~aia~~la~~G~------~V~~~~r~~----------------~~~~~~~~~~~~~~~~~--~~ 64 (262)
T 3ksu_A 9 LKNKVIVIAGGIKNLGALTAKTFALESV------NLVLHYHQA----------------KDSDTANKLKDELEDQG--AK 64 (262)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHTTSSC------EEEEEESCG----------------GGHHHHHHHHHHHHTTT--CE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC------EEEEEecCc----------------cCHHHHHHHHHHHHhcC--Cc
Confidence 56788999995 8999999999999998 777775321 11234455555555543 35
Q ss_pred EEEeecccCCCcc--cccc--hhccCCCcEEEEcc
Q 002073 652 IEALQNRVGPETE--NVFD--DTFWENITCVINAL 682 (972)
Q Consensus 652 I~~~~~~v~~~~e--~i~~--~~f~~~~DvVi~al 682 (972)
+..+...++.... ..+. .+-+...|++|++.
T Consensus 65 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnA 99 (262)
T 3ksu_A 65 VALYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTV 99 (262)
T ss_dssp EEEEECCCCSHHHHHHHHHHHHHHHCSEEEEEECC
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 6666666653211 1111 01234678888764
No 387
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=83.85 E-value=2.4 Score=46.06 Aligned_cols=77 Identities=19% Similarity=0.236 Sum_probs=47.9
Q ss_pred CHHHHHHhhcCeEEEEc-CChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCC
Q 002073 169 GRETMRRLFASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNA 247 (972)
Q Consensus 169 G~e~q~kL~~s~VlIvG-~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~ 247 (972)
|...|..|.+++|+|.| .+|+|.++|+.|+..|. +|.++|.+.-. .+. ..-...+++...+.+.+..+
T Consensus 18 ~p~~m~~l~gk~vlVTGas~GIG~aia~~la~~G~-~Vv~~~r~~~~----~~~-----~~~~~~~~~~~~~~~~~~~~- 86 (322)
T 3qlj_A 18 GPGSMGVVDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGL----DGS-----PASGGSAAQSVVDEITAAGG- 86 (322)
T ss_dssp ----CCTTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCT----TSS-----BTCTTSHHHHHHHHHHHTTC-
T ss_pred CCchhcccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCcccc----ccc-----ccccHHHHHHHHHHHHhcCC-
Confidence 44456678888999997 57999999999999998 78888764311 110 11123466666677766543
Q ss_pred CEEEEeecCC
Q 002073 248 VVLSTLTSKL 257 (972)
Q Consensus 248 V~V~~~~~~l 257 (972)
++..+..++
T Consensus 87 -~~~~~~~Dv 95 (322)
T 3qlj_A 87 -EAVADGSNV 95 (322)
T ss_dssp -EEEEECCCT
T ss_pred -cEEEEECCC
Confidence 444444443
No 388
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=83.85 E-value=3.4 Score=44.93 Aligned_cols=37 Identities=19% Similarity=0.184 Sum_probs=31.6
Q ss_pred HHHhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 571 KKLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 571 ~kL~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
..+.+++|+|.|+ |.||..+++.|+..|. +++++|.+
T Consensus 5 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~V~~~~r~ 42 (357)
T 1rkx_A 5 SFWQGKRVFVTGHTGFKGGWLSLWLQTMGA------TVKGYSLT 42 (357)
T ss_dssp HHHTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred hhhCCCEEEEECCCchHHHHHHHHHHhCCC------eEEEEeCC
Confidence 3567889999995 9999999999999987 78888764
No 389
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=83.85 E-value=1.4 Score=46.81 Aligned_cols=36 Identities=22% Similarity=0.355 Sum_probs=30.9
Q ss_pred HHhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 572 KLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 572 kL~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
.|++++++|.|+ ||||.++++.|+..|. +++++|.+
T Consensus 24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~------~V~~~~r~ 60 (277)
T 4fc7_A 24 LLRDKVAFITGGGSGIGFRIAEIFMRHGC------HTVIASRS 60 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTC------EEEEEESC
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC------EEEEEeCC
Confidence 467889999996 7899999999999998 88888753
No 390
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=83.84 E-value=3.3 Score=44.97 Aligned_cols=73 Identities=16% Similarity=0.197 Sum_probs=49.2
Q ss_pred eEEEEc-CChHHHHHHHHHHHhcC-CEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHH---hcCCCEEEEee
Q 002073 180 NILVSG-MQGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQE---LNNAVVLSTLT 254 (972)
Q Consensus 180 ~VlIvG-~gGlG~EiaKNLvLaGV-g~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~e---LNp~V~V~~~~ 254 (972)
+|+|+| +|.+|..++..|+..|. .+++|+|.. .+ ..|++....-|.. +...+++..
T Consensus 2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~----~~-------------~~~~~~~~~dl~~~~~~~~~~~v~~-- 62 (303)
T 1o6z_A 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIP----DK-------------EDDTVGQAADTNHGIAYDSNTRVRQ-- 62 (303)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCG----GG-------------HHHHHHHHHHHHHHHTTTCCCEEEE--
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCC----CC-------------hhhHHHHHHHHHHHHhhCCCcEEEe--
Confidence 799999 99999999999998885 458988850 00 1123222233333 345667665
Q ss_pred cCCChhhhcCCceEEEcCC
Q 002073 255 SKLTKEQLSDFQAVVFTDI 273 (972)
Q Consensus 255 ~~l~~e~l~~fdvVV~~~~ 273 (972)
+ +.+.+++.|+||.+..
T Consensus 63 ~--~~~a~~~aDvVi~~ag 79 (303)
T 1o6z_A 63 G--GYEDTAGSDVVVITAG 79 (303)
T ss_dssp C--CGGGGTTCSEEEECCC
T ss_pred C--CHHHhCCCCEEEEcCC
Confidence 2 3566889999998753
No 391
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=83.84 E-value=1.2 Score=48.97 Aligned_cols=51 Identities=14% Similarity=0.076 Sum_probs=39.4
Q ss_pred hhhhhh--ccCHHHHHHhhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCc
Q 002073 161 HSRQLA--VYGRETMRRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGT 212 (972)
Q Consensus 161 YsRQi~--l~G~e~q~kL~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~ 212 (972)
|+|+.+ -|.......|.+++|.|+|+|.+|..+|+.|...|. +|+.+|...
T Consensus 120 ~~~~~~~g~W~~~~~~~l~g~tvGIiG~G~IG~~vA~~l~~~G~-~V~~~dr~~ 172 (315)
T 3pp8_A 120 YQALKNQALWKPLPEYTREEFSVGIMGAGVLGAKVAESLQAWGF-PLRCWSRSR 172 (315)
T ss_dssp HHHHHHTTCCCCCCCCCSTTCCEEEECCSHHHHHHHHHHHTTTC-CEEEEESSC
T ss_pred HHHHHHhcccCCCCCCCcCCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEcCCc
Confidence 444443 254333457889999999999999999999999998 688888654
No 392
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=83.82 E-value=1.5 Score=46.03 Aligned_cols=35 Identities=23% Similarity=0.275 Sum_probs=29.1
Q ss_pred hcCeEEEEc-CChHHHHHHHHHHHhcCCEEEEEeCCc
Q 002073 177 FASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEGT 212 (972)
Q Consensus 177 ~~s~VlIvG-~gGlG~EiaKNLvLaGVg~itLvD~d~ 212 (972)
+.++|+|.| .|++|.++++.|+..|. +|++.|.+.
T Consensus 2 ~~k~vlVTGasg~IG~~la~~L~~~G~-~V~~~~r~~ 37 (267)
T 3rft_A 2 AMKRLLVTGAAGQLGRVMRERLAPMAE-ILRLADLSP 37 (267)
T ss_dssp CEEEEEEESTTSHHHHHHHHHTGGGEE-EEEEEESSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCC-EEEEEecCC
Confidence 346899998 68999999999999996 788887654
No 393
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=83.79 E-value=3.1 Score=45.68 Aligned_cols=74 Identities=18% Similarity=0.206 Sum_probs=49.7
Q ss_pred eEEEEc-CChHHHHHHHHHHHh-cC-CEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEeecC
Q 002073 180 NILVSG-MQGLGAEIAKNLILA-GV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSK 256 (972)
Q Consensus 180 ~VlIvG-~gGlG~EiaKNLvLa-GV-g~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~~~ 256 (972)
+|.|+| +|.+|..+|..|... +. .++.|+|-.. +++..+--|+.....+++..+...
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~--------------------~~~G~a~Dl~~~~~~~~v~~~~~~ 61 (312)
T 3hhp_A 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP--------------------VTPGVAVDLSHIPTAVKIKGFSGE 61 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST--------------------THHHHHHHHHTSCSSEEEEEECSS
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC--------------------CchhHHHHhhCCCCCceEEEecCC
Confidence 799999 899999999999876 54 6899998532 111122334444334566654332
Q ss_pred CChhhhcCCceEEEcCC
Q 002073 257 LTKEQLSDFQAVVFTDI 273 (972)
Q Consensus 257 l~~e~l~~fdvVV~~~~ 273 (972)
-+.+.+++.|+||.+..
T Consensus 62 ~~~~~~~~aDivii~ag 78 (312)
T 3hhp_A 62 DATPALEGADVVLISAG 78 (312)
T ss_dssp CCHHHHTTCSEEEECCS
T ss_pred CcHHHhCCCCEEEEeCC
Confidence 24567899999998753
No 394
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=83.72 E-value=2.3 Score=46.85 Aligned_cols=74 Identities=20% Similarity=0.229 Sum_probs=49.8
Q ss_pred cCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhC---CCcE
Q 002073 575 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSIN---PRLN 651 (972)
Q Consensus 575 ~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~in---P~~~ 651 (972)
..||.|||+|.+|..++-.|+..|+. .+|.++|-|. .|++..+..+.+.. +.++
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~----~el~L~Di~~-------------------~~~~g~~~dl~~~~~~~~~~~ 65 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIA----QEIGIVDIFK-------------------DKTKGDAIDLSNALPFTSPKK 65 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCC----SEEEEECSCH-------------------HHHHHHHHHHHTTGGGSCCCE
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCC----CEEEEEeCCc-------------------hHhHHHHHHHHHHHHhcCCeE
Confidence 46899999999999999999998873 6899987422 34444344444332 3445
Q ss_pred EEEeecccCCCcccccchhccCCCcEEEEccC
Q 002073 652 IEALQNRVGPETENVFDDTFWENITCVINALD 683 (972)
Q Consensus 652 I~~~~~~v~~~~e~i~~~~f~~~~DvVi~alD 683 (972)
+.+ +. .+-+++.|+||.+..
T Consensus 66 i~~-----~~-------~~a~~~aDvVii~ag 85 (326)
T 2zqz_A 66 IYS-----AE-------YSDAKDADLVVITAG 85 (326)
T ss_dssp EEE-----CC-------GGGGGGCSEEEECCC
T ss_pred EEE-----CC-------HHHhCCCCEEEEcCC
Confidence 553 11 122678999999875
No 395
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=83.71 E-value=1.2 Score=47.13 Aligned_cols=35 Identities=29% Similarity=0.341 Sum_probs=29.5
Q ss_pred HhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 573 LEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 573 L~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
+.+++++|.|+ |+||.++++.|+..|. +++++|.+
T Consensus 4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~ 39 (278)
T 1spx_A 4 FAEKVAIITGSSNGIGRATAVLFAREGA------KVTITGRH 39 (278)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC------EEEEEeCC
Confidence 56678888885 8999999999999997 78887653
No 396
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=83.65 E-value=0.72 Score=49.53 Aligned_cols=33 Identities=27% Similarity=0.466 Sum_probs=29.8
Q ss_pred CcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCc
Q 002073 576 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDV 614 (972)
Q Consensus 576 ~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~ 614 (972)
.+|.|||+|.+|+.++..|+..|. +++++|.+.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~------~V~l~d~~~ 37 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGF------AVTAYDINT 37 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC------EEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC------eEEEEeCCH
Confidence 589999999999999999999998 899987653
No 397
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=83.65 E-value=3.4 Score=44.05 Aligned_cols=29 Identities=24% Similarity=0.354 Sum_probs=23.2
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHhcCCEEEEEe
Q 002073 179 SNILVSGM-QGLGAEIAKNLILAGVKSVTLHD 209 (972)
Q Consensus 179 s~VlIvG~-gGlG~EiaKNLvLaGVg~itLvD 209 (972)
++|||.|. |++|..+++.|...| .++.++
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g--~~v~~~ 31 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESN--EIVVID 31 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTS--CEEEEC
T ss_pred CEEEEECCCchHHHHHHHHHHhCC--CEEEEE
Confidence 37999985 899999999999999 444444
No 398
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=83.58 E-value=0.95 Score=48.37 Aligned_cols=34 Identities=21% Similarity=0.216 Sum_probs=31.1
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeC
Q 002073 176 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDE 210 (972)
Q Consensus 176 L~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~ 210 (972)
+.+++|+|+|+||+|..+++.|...| .+|+++|.
T Consensus 117 l~~k~vlViGaGg~g~a~a~~L~~~G-~~V~v~~R 150 (271)
T 1nyt_A 117 RPGLRILLIGAGGASRGVLLPLLSLD-CAVTITNR 150 (271)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHcC-CEEEEEEC
Confidence 56789999999999999999999999 79999874
No 399
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=83.57 E-value=1.7 Score=48.22 Aligned_cols=33 Identities=18% Similarity=0.295 Sum_probs=28.8
Q ss_pred cCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 575 DAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 575 ~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
.++|+|.|+ |.||..+++.|+..|. +++++|.+
T Consensus 29 ~~~vlVtGatG~iG~~l~~~L~~~g~------~V~~~~r~ 62 (379)
T 2c5a_A 29 NLKISITGAGGFIASHIARRLKHEGH------YVIASDWK 62 (379)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred CCeEEEECCccHHHHHHHHHHHHCCC------eEEEEECC
Confidence 468999997 8999999999999986 78888764
No 400
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=83.56 E-value=1.7 Score=43.90 Aligned_cols=92 Identities=20% Similarity=0.101 Sum_probs=59.0
Q ss_pred eEEEEcC-ChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHh-cCCCEEEEeecCC
Q 002073 180 NILVSGM-QGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQEL-NNAVVLSTLTSKL 257 (972)
Q Consensus 180 ~VlIvG~-gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eL-Np~V~V~~~~~~l 257 (972)
+|+|.|+ |++|.++++.|...|. +|++++.+.- + +.++ .+.+ +.+..++
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~-------------------~-------~~~~~~~~~--~~~~~D~ 52 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGH-EVLAVVRDPQ-------------------K-------AADRLGATV--ATLVKEP 52 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHH-------------------H-------HHHHTCTTS--EEEECCG
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCC-EEEEEEeccc-------------------c-------cccccCCCc--eEEeccc
Confidence 6999997 9999999999999996 7877764221 1 1111 1233 3344444
Q ss_pred Ch---hhhcCCceEEEcCCC----------HHHHHHHHHHHHhcCCCceeEEeeecce
Q 002073 258 TK---EQLSDFQAVVFTDIS----------LDKAIEFDDFCHNHQPAISFIKAEVRGL 302 (972)
Q Consensus 258 ~~---e~l~~fdvVV~~~~~----------~~~~~~ln~~c~~~~~~IpfI~a~~~G~ 302 (972)
++ +.+.++|+||.+... ......+-+.|++.+ ..+|..++.|.
T Consensus 53 ~d~~~~~~~~~d~vi~~ag~~~~~~~~~~n~~~~~~l~~a~~~~~--~~~v~~SS~~~ 108 (224)
T 3h2s_A 53 LVLTEADLDSVDAVVDALSVPWGSGRGYLHLDFATHLVSLLRNSD--TLAVFILGSAS 108 (224)
T ss_dssp GGCCHHHHTTCSEEEECCCCCTTSSCTHHHHHHHHHHHHTCTTCC--CEEEEECCGGG
T ss_pred ccccHhhcccCCEEEECCccCCCcchhhHHHHHHHHHHHHHHHcC--CcEEEEeccee
Confidence 32 457788998876532 333445666777777 67777766543
No 401
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=83.51 E-value=1.9 Score=46.99 Aligned_cols=64 Identities=14% Similarity=0.282 Sum_probs=44.2
Q ss_pred HhhcCeEEEEc-CChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEe
Q 002073 175 RLFASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTL 253 (972)
Q Consensus 175 kL~~s~VlIvG-~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~ 253 (972)
.|.+++|||.| .||+|.++|+.|+..|. +|.+.|.+ ..+.+.+.+.+....+...+..+
T Consensus 5 ~l~~k~vlVTGas~gIG~~la~~l~~~G~-~Vv~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~ 64 (319)
T 3ioy_A 5 DFAGRTAFVTGGANGVGIGLVRQLLNQGC-KVAIADIR-------------------QDSIDKALATLEAEGSGPEVMGV 64 (319)
T ss_dssp CCTTCEEEEETTTSTHHHHHHHHHHHTTC-EEEEEESC-------------------HHHHHHHHHHHHHHTCGGGEEEE
T ss_pred CCCCCEEEEcCCchHHHHHHHHHHHHCCC-EEEEEECC-------------------HHHHHHHHHHHHhcCCCCeEEEE
Confidence 45678899998 58999999999999998 58777643 22455555666655554455555
Q ss_pred ecCCC
Q 002073 254 TSKLT 258 (972)
Q Consensus 254 ~~~l~ 258 (972)
..+++
T Consensus 65 ~~Dl~ 69 (319)
T 3ioy_A 65 QLDVA 69 (319)
T ss_dssp ECCTT
T ss_pred ECCCC
Confidence 54443
No 402
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=83.44 E-value=2 Score=47.18 Aligned_cols=73 Identities=18% Similarity=0.134 Sum_probs=52.5
Q ss_pred hcCeEEEEcCChHHHHHHHHHHHh-cCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEeec
Q 002073 177 FASNILVSGMQGLGAEIAKNLILA-GVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTS 255 (972)
Q Consensus 177 ~~s~VlIvG~gGlG~EiaKNLvLa-GVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~~ 255 (972)
...+|+|+|+|..|...++.|... ++.+|+++|.+ |++..++++++.. .+.+...
T Consensus 120 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~---------------------~a~~la~~l~~~~-g~~~~~~-- 175 (313)
T 3hdj_A 120 RSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY---------------------ASPEILERIGRRC-GVPARMA-- 175 (313)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT---------------------CCHHHHHHHHHHH-TSCEEEC--
T ss_pred CCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc---------------------HHHHHHHHHHHhc-CCeEEEe--
Confidence 457899999999999999999874 79999999853 3344455555432 2444443
Q ss_pred CCChhhhcCCceEEEcCCC
Q 002073 256 KLTKEQLSDFQAVVFTDIS 274 (972)
Q Consensus 256 ~l~~e~l~~fdvVV~~~~~ 274 (972)
+ -++.+.++|+||.|+.+
T Consensus 176 ~-~~eav~~aDIVi~aT~s 193 (313)
T 3hdj_A 176 A-PADIAAQADIVVTATRS 193 (313)
T ss_dssp C-HHHHHHHCSEEEECCCC
T ss_pred C-HHHHHhhCCEEEEccCC
Confidence 2 24567899999998865
No 403
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=83.43 E-value=0.87 Score=48.97 Aligned_cols=34 Identities=29% Similarity=0.414 Sum_probs=30.6
Q ss_pred hcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcC
Q 002073 574 EDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDD 612 (972)
Q Consensus 574 ~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~ 612 (972)
..++++|+|+||.|..++..|+..|+ .+|+|++.
T Consensus 118 ~~~~vlvlGaGgaarav~~~L~~~G~-----~~i~v~nR 151 (271)
T 1npy_A 118 KNAKVIVHGSGGMAKAVVAAFKNSGF-----EKLKIYAR 151 (271)
T ss_dssp TTSCEEEECSSTTHHHHHHHHHHTTC-----CCEEEECS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-----CEEEEEeC
Confidence 35789999999999999999999999 89999853
No 404
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=83.43 E-value=0.76 Score=49.24 Aligned_cols=36 Identities=11% Similarity=0.348 Sum_probs=31.5
Q ss_pred HHhcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 572 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 572 kL~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
.+..++|+|||+|++|..+++.|+..|+ +++++|.+
T Consensus 126 ~~~~~~v~iiGaG~~g~aia~~L~~~g~------~V~v~~r~ 161 (275)
T 2hk9_A 126 EVKEKSILVLGAGGASRAVIYALVKEGA------KVFLWNRT 161 (275)
T ss_dssp TGGGSEEEEECCSHHHHHHHHHHHHHTC------EEEEECSS
T ss_pred CcCCCEEEEECchHHHHHHHHHHHHcCC------EEEEEECC
Confidence 3678899999999999999999999987 78888644
No 405
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=83.38 E-value=1.5 Score=46.75 Aligned_cols=36 Identities=22% Similarity=0.416 Sum_probs=28.1
Q ss_pred HHHhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 571 KKLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 571 ~kL~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
..+. ++++|.|+ ||||.++++.|+..|. +++++|.+
T Consensus 18 ~~~~-k~vlVTGas~gIG~aia~~La~~G~------~V~~~~r~ 54 (272)
T 2nwq_A 18 SHMS-STLFITGATSGFGEACARRFAEAGW------SLVLTGRR 54 (272)
T ss_dssp ---C-CEEEESSTTTSSHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCcC-cEEEEeCCCCHHHHHHHHHHHHCCC------EEEEEECC
Confidence 3455 77888885 8999999999999997 78888643
No 406
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=83.34 E-value=2 Score=48.39 Aligned_cols=112 Identities=14% Similarity=0.093 Sum_probs=64.1
Q ss_pred cCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCC-----
Q 002073 575 DAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINP----- 648 (972)
Q Consensus 575 ~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP----- 648 (972)
.++|+|.|+ |.||.++++.|+..|. ++++++.+.- .......+.+.+....+
T Consensus 69 ~~~vlVTGatG~iG~~l~~~L~~~g~------~V~~~~R~~~----------------~~~~~~~l~~~l~~~~~~~~~~ 126 (427)
T 4f6c_A 69 LGNTLLTGATGFLGAYLIEALQGYSH------RIYCFIRADN----------------EEIAWYKLMTNLNDYFSEETVE 126 (427)
T ss_dssp CEEEEEECTTSHHHHHHHHHHTTTEE------EEEEEEECSS----------------HHHHHHHHHHHHHHHSCHHHHH
T ss_pred CCEEEEecCCcHHHHHHHHHHHcCCC------EEEEEECCCC----------------hHHHHHHHHHHHHHhccccccc
Confidence 348999996 8899999999988776 7777653221 00112222233332221
Q ss_pred --CcEEEEeecccCCCcccccchhccCCCcEEEEccC--------------ChHHHHHHhhhhhccccceEecccCCccc
Q 002073 649 --RLNIEALQNRVGPETENVFDDTFWENITCVINALD--------------NVNARLYVDQRCLYFQKPLLESGTLGAKC 712 (972)
Q Consensus 649 --~~~I~~~~~~v~~~~e~i~~~~f~~~~DvVi~alD--------------n~~aR~~v~~~c~~~~kPli~sgt~G~~G 712 (972)
.-++..+...+... +. +. .+.++|+||++.. |+.+-..+-+.|....+.++..++.+. |
T Consensus 127 ~~~~~v~~v~~Dl~d~-~~-l~--~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~~~~~~v~~SS~~~-G 201 (427)
T 4f6c_A 127 MMLSNIEVIVGDFECM-DD-VV--LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV-G 201 (427)
T ss_dssp HHHTTEEEEEECC----CC-CC--CSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHHTTCEEEEEEEGGG-G
T ss_pred cccCceEEEeCCCCCc-cc-CC--CcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCcEEEECchHh-C
Confidence 12455566566531 11 21 4678999999754 233334555666665667777666665 5
Q ss_pred e
Q 002073 713 N 713 (972)
Q Consensus 713 ~ 713 (972)
.
T Consensus 202 ~ 202 (427)
T 4f6c_A 202 T 202 (427)
T ss_dssp S
T ss_pred C
Confidence 4
No 407
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=83.33 E-value=6.5 Score=42.15 Aligned_cols=35 Identities=20% Similarity=0.237 Sum_probs=28.4
Q ss_pred hcCeEEEEc-CChHHHHHHHHHHHhcC-CEEEEEeCC
Q 002073 177 FASNILVSG-MQGLGAEIAKNLILAGV-KSVTLHDEG 211 (972)
Q Consensus 177 ~~s~VlIvG-~gGlG~EiaKNLvLaGV-g~itLvD~d 211 (972)
.+.+|||.| .|++|..+++.|...|- -+|+++|..
T Consensus 2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~ 38 (336)
T 2hun_A 2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKL 38 (336)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECC
T ss_pred CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecC
Confidence 345799999 59999999999999983 378888753
No 408
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=83.32 E-value=1.2 Score=50.44 Aligned_cols=71 Identities=20% Similarity=0.206 Sum_probs=54.5
Q ss_pred cccCchhhHhhhhhhhhHhhhhcCCccccceeeEeeeccCCCCCCCCCCccCCccCchhhhhhhcCHHHHHHHhcCcEEE
Q 002073 501 AVLNPMAAMFGGIVGQEVVKACSGKFHPLYQFFYFDSVESLPTEPLDSTEFKPINSRYDAQISVFGAKLQKKLEDAKVFI 580 (972)
Q Consensus 501 ~el~PvaA~iGGiaAQEVIKaiTgKf~PI~q~~yfD~~e~Lp~~~~~~~~~~~~~~RYdrqi~l~G~~~q~kL~~~kVlI 580 (972)
.-|+||+.+-|=.+.|+.-..+ +|+.|+- . ...+ .+...+|+|
T Consensus 147 ~~l~~~s~iAGy~Av~~aa~~l-~~~~~~l----~---~~~~-----------------------------~v~~~kV~V 189 (381)
T 3p2y_A 147 DALSSQANVAGYKAVLLGASLS-TRFVPML----T---TAAG-----------------------------TVKPASALV 189 (381)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHC-SSCSSCE----E---CSSC-----------------------------EECCCEEEE
T ss_pred eeecchhHHHHHHHHHHHHHHh-hhhhhhh----h---cccC-----------------------------CcCCCEEEE
Confidence 4578999999999999999865 5555521 1 1111 345789999
Q ss_pred EcCCcchHHHHHHHHHccccCCCCceEEEEcCCc
Q 002073 581 VGSGALGCEFLKNVALMGVSCGNQGKLTITDDDV 614 (972)
Q Consensus 581 VGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~ 614 (972)
+|+|.+|..+++.+..+|. +++++|...
T Consensus 190 iG~G~iG~~aa~~a~~lGa------~V~v~D~~~ 217 (381)
T 3p2y_A 190 LGVGVAGLQALATAKRLGA------KTTGYDVRP 217 (381)
T ss_dssp ESCSHHHHHHHHHHHHHTC------EEEEECSSG
T ss_pred ECchHHHHHHHHHHHHCCC------EEEEEeCCH
Confidence 9999999999999999998 799988653
No 409
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=83.28 E-value=1.1 Score=46.95 Aligned_cols=34 Identities=12% Similarity=0.233 Sum_probs=29.2
Q ss_pred HhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcC
Q 002073 573 LEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDD 612 (972)
Q Consensus 573 L~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~ 612 (972)
+++++|+|.|+ |+||.++++.|+..|. +++++|.
T Consensus 19 ~~~k~vlItGasggiG~~la~~l~~~G~------~v~~~~r 53 (274)
T 1ja9_A 19 LAGKVALTTGAGRGIGRGIAIELGRRGA------SVVVNYG 53 (274)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC------EEEEEcC
Confidence 56788999995 8999999999999997 7877764
No 410
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=83.26 E-value=1.1 Score=46.42 Aligned_cols=36 Identities=19% Similarity=0.434 Sum_probs=30.4
Q ss_pred HHhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 572 KLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 572 kL~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
.+.+++|+|.|+ |+||.++++.|+..|. +++++|.+
T Consensus 11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~------~V~~~~r~ 47 (249)
T 3f9i_A 11 DLTGKTSLITGASSGIGSAIARLLHKLGS------KVIISGSN 47 (249)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCC------EEEEEcCC
Confidence 345788999995 8899999999999997 78888753
No 411
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=83.25 E-value=0.99 Score=51.22 Aligned_cols=35 Identities=31% Similarity=0.556 Sum_probs=32.9
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeC
Q 002073 176 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDE 210 (972)
Q Consensus 176 L~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~ 210 (972)
+.+.+|+|+|+|++|..+++.|...|+++|+++|.
T Consensus 165 l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r 199 (404)
T 1gpj_A 165 LHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANR 199 (404)
T ss_dssp CTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECS
T ss_pred ccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeC
Confidence 67899999999999999999999999999999875
No 412
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=83.25 E-value=3.2 Score=44.94 Aligned_cols=93 Identities=8% Similarity=0.049 Sum_probs=0.0
Q ss_pred eEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchH--HHHHHHHHHHhcCCCE-------E
Q 002073 180 NILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNR--ALASVQKLQELNNAVV-------L 250 (972)
Q Consensus 180 ~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~R--Aea~~~~L~eLNp~V~-------V 250 (972)
+|.|+|+|.+|..+|.+|..+|. .++++| | .....+.+.+..-.+. +
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~-~V~~~~-----------------------r~~~~~~~~~~~~~~~~~~~g~~~~~~ 57 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGN-EVRIWG-----------------------TEFDTEILKSISAGREHPRLGVKLNGV 57 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCC-EEEEEC-----------------------CGGGHHHHHHHHTTCCBTTTTBCCCSE
T ss_pred EEEEECcCHHHHHHHHHHHhCCC-eEEEEE-----------------------ccCCHHHHHHHHHhCcCcccCccccce
Q ss_pred EEeecCCChhhhcCCceEEEcCCCHHHHHHHHHHHHhcCCCceeEEe
Q 002073 251 STLTSKLTKEQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIKA 297 (972)
Q Consensus 251 ~~~~~~l~~e~l~~fdvVV~~~~~~~~~~~ln~~c~~~~~~IpfI~a 297 (972)
.+...+-..+.+.++|+||+|..+......+.++.. ..+...+|..
T Consensus 58 ~~~~~~~~~~~~~~~D~vi~~v~~~~~~~v~~~i~~-l~~~~~vv~~ 103 (335)
T 1txg_A 58 EIFWPEQLEKCLENAEVVLLGVSTDGVLPVMSRILP-YLKDQYIVLI 103 (335)
T ss_dssp EEECGGGHHHHHTTCSEEEECSCGGGHHHHHHHHTT-TCCSCEEEEC
T ss_pred EEecHHhHHHHHhcCCEEEEcCChHHHHHHHHHHhc-CCCCCEEEEE
No 413
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=83.19 E-value=3.7 Score=47.25 Aligned_cols=34 Identities=24% Similarity=0.200 Sum_probs=30.6
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCcc
Q 002073 179 SNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTV 213 (972)
Q Consensus 179 s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V 213 (972)
.+|.|||+|.+|..+|.+|+..|. .|+++|.+.-
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~-~V~~~D~~~~ 36 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGA-NVRCIDTDRN 36 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCC-EEEEEECCHH
Confidence 589999999999999999999996 8999997643
No 414
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=83.18 E-value=1.7 Score=46.42 Aligned_cols=90 Identities=17% Similarity=0.203 Sum_probs=0.0
Q ss_pred eEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEeecCCCh
Q 002073 180 NILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKLTK 259 (972)
Q Consensus 180 ~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~~~l~~ 259 (972)
+|.|+|+|.+|..++++|...|. .++++| |.....+.+.+. .+..... .+
T Consensus 7 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~-----------------------~~~~~~~~~~~~----g~~~~~~--~~ 56 (299)
T 1vpd_A 7 KVGFIGLGIMGKPMSKNLLKAGY-SLVVSD-----------------------RNPEAIADVIAA----GAETAST--AK 56 (299)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTC-EEEEEC-----------------------SCHHHHHHHHHT----TCEECSS--HH
T ss_pred eEEEECchHHHHHHHHHHHhCCC-EEEEEe-----------------------CCHHHHHHHHHC----CCeecCC--HH
Q ss_pred hhhcCCceEEEcCC-CHHHHHHH---HHHHHhcCCCceeEEeee
Q 002073 260 EQLSDFQAVVFTDI-SLDKAIEF---DDFCHNHQPAISFIKAEV 299 (972)
Q Consensus 260 e~l~~fdvVV~~~~-~~~~~~~l---n~~c~~~~~~IpfI~a~~ 299 (972)
+.+.++|+||.|.. +......+ .++.....+...+|...+
T Consensus 57 ~~~~~~D~vi~~v~~~~~~~~~~~~~~~l~~~l~~~~~vv~~s~ 100 (299)
T 1vpd_A 57 AIAEQCDVIITMLPNSPHVKEVALGENGIIEGAKPGTVLIDMSS 100 (299)
T ss_dssp HHHHHCSEEEECCSSHHHHHHHHHSTTCHHHHCCTTCEEEECSC
T ss_pred HHHhCCCEEEEECCCHHHHHHHHhCcchHhhcCCCCCEEEECCC
No 415
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=83.15 E-value=1.4 Score=45.79 Aligned_cols=34 Identities=15% Similarity=0.331 Sum_probs=28.2
Q ss_pred HhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcC
Q 002073 573 LEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDD 612 (972)
Q Consensus 573 L~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~ 612 (972)
|++++++|.|+ |+||.++++.|+..|. +++++|.
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~------~V~~~~r 36 (246)
T 2uvd_A 2 LKGKVALVTGASRGIGRAIAIDLAKQGA------NVVVNYA 36 (246)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEeC
Confidence 35678889985 8999999999999997 7777753
No 416
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=83.15 E-value=1.7 Score=44.83 Aligned_cols=33 Identities=21% Similarity=0.402 Sum_probs=28.3
Q ss_pred HhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEc
Q 002073 573 LEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITD 611 (972)
Q Consensus 573 L~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD 611 (972)
+++++++|.|+ |+||.++++.|+..|. +++++|
T Consensus 3 l~~~~vlItGasggiG~~~a~~l~~~G~------~V~~~~ 36 (247)
T 2hq1_A 3 LKGKTAIVTGSSRGLGKAIAWKLGNMGA------NIVLNG 36 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTC------EEEEEE
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC------EEEEEc
Confidence 45778999995 8999999999999997 777774
No 417
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=83.14 E-value=1.7 Score=45.71 Aligned_cols=79 Identities=9% Similarity=0.106 Sum_probs=49.4
Q ss_pred HHHhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHH-HHHHHHHHhhCC
Q 002073 571 KKLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKS-TVAASAATSINP 648 (972)
Q Consensus 571 ~kL~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks-~vaa~~l~~inP 648 (972)
..+.+++++|.|+ |+||.++++.|+..|. +++++|.+.-...+. +..+-..|+....+ +.+.+.+.+...
T Consensus 24 ~~~~~k~vlVTGas~gIG~aia~~l~~~G~------~V~~~~r~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~g 95 (260)
T 3un1_A 24 MRNQQKVVVITGASQGIGAGLVRAYRDRNY------RVVATSRSIKPSADP--DIHTVAGDISKPETADRIVREGIERFG 95 (260)
T ss_dssp HHTTCCEEEESSCSSHHHHHHHHHHHHTTC------EEEEEESSCCCCSST--TEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred hCcCCCEEEEeCCCCHHHHHHHHHHHHCCC------EEEEEeCChhhcccC--ceEEEEccCCCHHHHHHHHHHHHHHCC
Confidence 4577888999995 8899999999999998 899998764333332 23334456665432 222333333333
Q ss_pred CcEEEEeec
Q 002073 649 RLNIEALQN 657 (972)
Q Consensus 649 ~~~I~~~~~ 657 (972)
.+.+-.+..
T Consensus 96 ~iD~lv~nA 104 (260)
T 3un1_A 96 RIDSLVNNA 104 (260)
T ss_dssp CCCEEEECC
T ss_pred CCCEEEECC
Confidence 444444443
No 418
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=83.12 E-value=1.2 Score=47.43 Aligned_cols=37 Identities=14% Similarity=0.217 Sum_probs=28.7
Q ss_pred HHHhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 571 KKLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 571 ~kL~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
..+.+++++|.|+ ||||.++++.|+..|. +++++|.+
T Consensus 24 ~~~~~k~~lVTGas~GIG~aia~~la~~G~------~V~~~~r~ 61 (272)
T 4dyv_A 24 SKTGKKIAIVTGAGSGVGRAVAVALAGAGY------GVALAGRR 61 (272)
T ss_dssp ----CCEEEETTTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEECC
Confidence 3566778888885 8899999999999998 78888754
No 419
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=83.11 E-value=2.2 Score=47.27 Aligned_cols=77 Identities=17% Similarity=0.196 Sum_probs=52.2
Q ss_pred HHhcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCC---
Q 002073 572 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINP--- 648 (972)
Q Consensus 572 kL~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP--- 648 (972)
.....||.|||+|.+|+.++-.|++.|.. .+++++|.+ +.|++..+.-+.+..+
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~~~~~~----~el~L~Di~-------------------~~~~~g~a~DL~~~~~~~~ 72 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISILMKDLA----DELALVDVI-------------------EDKLKGEMMDLQHGSLFLK 72 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHHHTTCC----SEEEEECSC-------------------HHHHHHHHHHHHHTGGGCS
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCCC----ceEEEEeCC-------------------hHHHHHHHHhhhhhhhccC
Confidence 44567999999999999999999999873 489998743 3466666666665532
Q ss_pred CcEEEEeecccCCCcccccchhccCCCcEEEEcc
Q 002073 649 RLNIEALQNRVGPETENVFDDTFWENITCVINAL 682 (972)
Q Consensus 649 ~~~I~~~~~~v~~~~e~i~~~~f~~~~DvVi~al 682 (972)
..++... .+ + +-++++|+||.+.
T Consensus 73 ~~~i~~~-----~d----~--~~~~~aDiVvi~a 95 (331)
T 4aj2_A 73 TPKIVSS-----KD----Y--SVTANSKLVIITA 95 (331)
T ss_dssp CCEEEEC-----SS----G--GGGTTEEEEEECC
T ss_pred CCeEEEc-----CC----H--HHhCCCCEEEEcc
Confidence 2222211 11 1 2267899998874
No 420
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=83.07 E-value=1.6 Score=47.75 Aligned_cols=88 Identities=14% Similarity=0.085 Sum_probs=0.0
Q ss_pred eEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCC-------EEEE
Q 002073 180 NILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAV-------VLST 252 (972)
Q Consensus 180 ~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V-------~V~~ 252 (972)
+|.|+|+|.+|+.+|.+|+.+| ..|+++| |.....+.|++.-..+ .+.+
T Consensus 16 kI~iIG~G~mG~ala~~L~~~G-~~V~~~~-----------------------r~~~~~~~l~~~g~~~~~~~~~~~~~~ 71 (335)
T 1z82_A 16 RFFVLGAGSWGTVFAQMLHENG-EEVILWA-----------------------RRKEIVDLINVSHTSPYVEESKITVRA 71 (335)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT-CEEEEEC-----------------------SSHHHHHHHHHHSCBTTBTTCCCCSEE
T ss_pred cEEEECcCHHHHHHHHHHHhCC-CeEEEEe-----------------------CCHHHHHHHHHhCCcccCCCCeeeEEE
Q ss_pred eecCCChhhhcCCceEEEcCCCHHHHHHHHHHHHhcCCCceeEEe
Q 002073 253 LTSKLTKEQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIKA 297 (972)
Q Consensus 253 ~~~~l~~e~l~~fdvVV~~~~~~~~~~~ln~~c~~~~~~IpfI~a 297 (972)
..+ ..+ +..+|+||+|.-+......+.++.. .+ ..+|..
T Consensus 72 ~~~--~~~-~~~aDvVil~vk~~~~~~v~~~l~~-~~--~~vv~~ 110 (335)
T 1z82_A 72 TND--LEE-IKKEDILVIAIPVQYIREHLLRLPV-KP--SMVLNL 110 (335)
T ss_dssp ESC--GGG-CCTTEEEEECSCGGGHHHHHTTCSS-CC--SEEEEC
T ss_pred eCC--HHH-hcCCCEEEEECCHHHHHHHHHHhCc-CC--CEEEEE
No 421
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=83.06 E-value=0.64 Score=51.13 Aligned_cols=32 Identities=28% Similarity=0.451 Sum_probs=28.7
Q ss_pred cCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcC
Q 002073 575 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDD 612 (972)
Q Consensus 575 ~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~ 612 (972)
..||.|||+|++|+.++..|++.|. +++++|.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~------~V~~~~r 34 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGE------AINVLAR 34 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTC------CEEEECC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCC------EEEEEEC
Confidence 4689999999999999999999987 7888864
No 422
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=83.04 E-value=1.2 Score=48.54 Aligned_cols=34 Identities=12% Similarity=0.226 Sum_probs=30.1
Q ss_pred HHhcCcEEEEcCCc-chHHHHHHHHHccccCCCCceEEEEc
Q 002073 572 KLEDAKVFIVGSGA-LGCEFLKNVALMGVSCGNQGKLTITD 611 (972)
Q Consensus 572 kL~~~kVlIVGaGg-iG~e~lknLa~~Gv~~~~~g~i~iiD 611 (972)
.+..++++|||.|. +|..+++.|...|. ++++.+
T Consensus 162 ~l~gk~vvVIG~s~iVG~p~A~lL~~~gA------tVtv~h 196 (301)
T 1a4i_A 162 PIAGRHAVVVGRSKIVGAPMHDLLLWNNA------TVTTCH 196 (301)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTC------EEEEEC
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHhCCC------eEEEEE
Confidence 36789999999996 79999999999997 789886
No 423
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=83.03 E-value=2.3 Score=45.38 Aligned_cols=23 Identities=13% Similarity=0.419 Sum_probs=20.0
Q ss_pred CcEEEEcC-CcchHHHHHHHHHcc
Q 002073 576 AKVFIVGS-GALGCEFLKNVALMG 598 (972)
Q Consensus 576 ~kVlIVGa-GgiG~e~lknLa~~G 598 (972)
++|+|.|+ |.||..+++.|+..|
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g 25 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESN 25 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTS
T ss_pred CEEEEECCCchHHHHHHHHHHhCC
Confidence 47999996 889999999998876
No 424
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=83.00 E-value=3.1 Score=46.04 Aligned_cols=34 Identities=21% Similarity=0.317 Sum_probs=30.2
Q ss_pred cCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcC
Q 002073 575 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDD 612 (972)
Q Consensus 575 ~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~ 612 (972)
..||.|||+|.+|+.++..|+..|+. ++++++|-
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~g~~----~ev~L~Di 54 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMKDLA----DEVALVDV 54 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHHCCC----SEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCC----CeEEEEEC
Confidence 46899999999999999999999983 58999874
No 425
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=83.00 E-value=2.3 Score=43.82 Aligned_cols=89 Identities=11% Similarity=0.096 Sum_probs=56.4
Q ss_pred cCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCcEEEE
Q 002073 575 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEA 654 (972)
Q Consensus 575 ~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~~I~~ 654 (972)
+.+|+|+|+|.+|..+++.|...| - ++++|.|.- +. +.+. +++. .
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g------~-v~vid~~~~-------------------~~----~~~~---~~~~--~ 53 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSE------V-FVLAEDENV-------------------RK----KVLR---SGAN--F 53 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSE------E-EEEESCGGG-------------------HH----HHHH---TTCE--E
T ss_pred CCEEEEECCChHHHHHHHHHHhCC------e-EEEEECCHH-------------------HH----HHHh---cCCe--E
Confidence 568999999999999999987654 3 777775431 11 1122 2333 3
Q ss_pred eecccCCCcccccchhccCCCcEEEEccCChHHHHHHhhhhhcccc
Q 002073 655 LQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQK 700 (972)
Q Consensus 655 ~~~~v~~~~e~i~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~~~k 700 (972)
+....+ ....+...-++++|.||.++++.+.-..+...+...+.
T Consensus 54 i~gd~~--~~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~ 97 (234)
T 2aef_A 54 VHGDPT--RVSDLEKANVRGARAVIVDLESDSETIHCILGIRKIDE 97 (234)
T ss_dssp EESCTT--CHHHHHHTTCTTCSEEEECCSCHHHHHHHHHHHHHHCS
T ss_pred EEcCCC--CHHHHHhcCcchhcEEEEcCCCcHHHHHHHHHHHHHCC
Confidence 333332 12233333467899999999988777777777766543
No 426
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=82.99 E-value=1.5 Score=46.48 Aligned_cols=35 Identities=14% Similarity=0.426 Sum_probs=30.0
Q ss_pred HhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 573 LEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 573 L~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
+.+++++|.|+ |+||.++++.|+..|. +++++|.+
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~G~------~V~~~~r~ 54 (273)
T 1ae1_A 19 LKGTTALVTGGSKGIGYAIVEELAGLGA------RVYTCSRN 54 (273)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHCCC------EEEEEeCC
Confidence 56788999995 8999999999999997 78887654
No 427
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=82.97 E-value=4.2 Score=44.32 Aligned_cols=33 Identities=24% Similarity=0.311 Sum_probs=29.4
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcC-CEEEEEeCC
Q 002073 179 SNILVSGMQGLGAEIAKNLILAGV-KSVTLHDEG 211 (972)
Q Consensus 179 s~VlIvG~gGlG~EiaKNLvLaGV-g~itLvD~d 211 (972)
.+|.|+|+|.+|+.+|..|+..|. ..++|+|-+
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~ 48 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDLS 48 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCC
Confidence 689999999999999999999995 579999864
No 428
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=82.96 E-value=2.1 Score=44.71 Aligned_cols=33 Identities=15% Similarity=0.301 Sum_probs=27.7
Q ss_pred cCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 575 DAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 575 ~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
+++++|.|+ |+||.++++.|+..|. +++++|.+
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~ 35 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGF------AVAIADYN 35 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC------EEEEEeCC
Confidence 467899985 8899999999999997 78887643
No 429
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=82.94 E-value=1.3 Score=49.05 Aligned_cols=44 Identities=16% Similarity=0.224 Sum_probs=36.7
Q ss_pred cCHHH-HHHhhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCc
Q 002073 168 YGRET-MRRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGT 212 (972)
Q Consensus 168 ~G~e~-q~kL~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~ 212 (972)
|.... ...|.+++|.|+|+|.+|..+|+.|...|. +|..+|...
T Consensus 126 W~~~~~~~~l~gktvGIiGlG~IG~~vA~~l~~~G~-~V~~~dr~~ 170 (324)
T 3evt_A 126 WALPMTTSTLTGQQLLIYGTGQIGQSLAAKASALGM-HVIGVNTTG 170 (324)
T ss_dssp SSCSSCCCCSTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSC
T ss_pred cccCCCCccccCCeEEEECcCHHHHHHHHHHHhCCC-EEEEECCCc
Confidence 54332 456899999999999999999999999998 788888654
No 430
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=82.93 E-value=4.3 Score=46.87 Aligned_cols=94 Identities=17% Similarity=0.161 Sum_probs=67.9
Q ss_pred hcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEeecC
Q 002073 177 FASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSK 256 (972)
Q Consensus 177 ~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~~~ 256 (972)
...+|+|+|.|-+|..+|+.|-. + ..+++++.+ +.|++.+++ ..|.+.| ..++
T Consensus 234 ~~~~v~I~GgG~ig~~lA~~L~~-~-~~v~iIE~d-------------------~~r~~~la~----~l~~~~V--i~GD 286 (461)
T 4g65_A 234 PYRRIMIVGGGNIGASLAKRLEQ-T-YSVKLIERN-------------------LQRAEKLSE----ELENTIV--FCGD 286 (461)
T ss_dssp CCCEEEEECCSHHHHHHHHHHTT-T-SEEEEEESC-------------------HHHHHHHHH----HCTTSEE--EESC
T ss_pred cccEEEEEcchHHHHHHHHHhhh-c-CceEEEecC-------------------HHHHHHHHH----HCCCceE--Eecc
Confidence 35789999999999999999843 3 578888753 335554444 4455433 3333
Q ss_pred ------CChhhhcCCceEEEcCCCHHHHHHHHHHHHhcCCCceeEEeee
Q 002073 257 ------LTKEQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIKAEV 299 (972)
Q Consensus 257 ------l~~e~l~~fdvVV~~~~~~~~~~~ln~~c~~~~~~IpfI~a~~ 299 (972)
|.++.+.++|++|.++.+-+.-....-++++.| ++-+.+-.
T Consensus 287 ~td~~~L~ee~i~~~D~~ia~T~~De~Ni~~~llAk~~g--v~kvIa~v 333 (461)
T 4g65_A 287 AADQELLTEENIDQVDVFIALTNEDETNIMSAMLAKRMG--AKKVMVLI 333 (461)
T ss_dssp TTCHHHHHHTTGGGCSEEEECCSCHHHHHHHHHHHHHTT--CSEEEEEC
T ss_pred ccchhhHhhcCchhhcEEEEcccCcHHHHHHHHHHHHcC--Cccccccc
Confidence 234567889999999999999999999999999 66555443
No 431
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=82.91 E-value=1 Score=47.16 Aligned_cols=35 Identities=17% Similarity=0.384 Sum_probs=29.5
Q ss_pred HhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 573 LEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 573 L~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
+.+++|+|.|+ |+||.++++.|+..|. +++++|.+
T Consensus 12 l~~k~vlITGasggiG~~la~~l~~~G~------~V~~~~r~ 47 (266)
T 1xq1_A 12 LKAKTVLVTGGTKGIGHAIVEEFAGFGA------VIHTCARN 47 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 55678999985 8999999999999997 78887643
No 432
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=82.80 E-value=0.76 Score=49.15 Aligned_cols=35 Identities=17% Similarity=0.341 Sum_probs=30.5
Q ss_pred HhcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 573 LEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 573 L~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
+..++++|+|+|++|..+++.|+..|. +++++|.+
T Consensus 117 l~~k~vlViGaGg~g~a~a~~L~~~G~------~V~v~~R~ 151 (271)
T 1nyt_A 117 RPGLRILLIGAGGASRGVLLPLLSLDC------AVTITNRT 151 (271)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC------EEEEECSS
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHcCC------EEEEEECC
Confidence 467899999999999999999999996 78887543
No 433
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=82.73 E-value=0.86 Score=49.48 Aligned_cols=35 Identities=23% Similarity=0.452 Sum_probs=30.5
Q ss_pred cCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 575 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 575 ~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
..||.|||+|++|+.++..|+..|.. ++++++|.+
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~----~~V~l~d~~ 41 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIA----REIVLEDIA 41 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCC----SEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCC----CEEEEEeCC
Confidence 46899999999999999999999862 589999865
No 434
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=82.68 E-value=3.8 Score=42.18 Aligned_cols=35 Identities=37% Similarity=0.490 Sum_probs=29.9
Q ss_pred HhhcCeEEEEcC-ChHHHHHHHHHHHhcCCEEEEEeC
Q 002073 175 RLFASNILVSGM-QGLGAEIAKNLILAGVKSVTLHDE 210 (972)
Q Consensus 175 kL~~s~VlIvG~-gGlG~EiaKNLvLaGVg~itLvD~ 210 (972)
.|++++|+|.|. ||+|.++|+.|+..|. +|.++|.
T Consensus 11 ~l~~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r 46 (247)
T 3i1j_A 11 LLKGRVILVTGAARGIGAAAARAYAAHGA-SVVLLGR 46 (247)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEec
Confidence 467889999984 8999999999999998 6888774
No 435
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=82.67 E-value=0.81 Score=49.43 Aligned_cols=32 Identities=22% Similarity=0.457 Sum_probs=29.2
Q ss_pred CcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 576 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 576 ~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
.+|.|||+|.+|+.++..|+..|. +++++|.+
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~------~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGH------TVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC------EEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC------eEEEEECC
Confidence 479999999999999999999997 89999865
No 436
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=82.61 E-value=0.76 Score=54.35 Aligned_cols=32 Identities=28% Similarity=0.199 Sum_probs=28.1
Q ss_pred eEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCc
Q 002073 180 NILVSGMQGLGAEIAKNLILAGVKSVTLHDEGT 212 (972)
Q Consensus 180 ~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~ 212 (972)
.|+|||.|+-|-..|..++..|. ++.|+|.+.
T Consensus 44 DviVIG~GpaG~~aA~~aa~~G~-kValIE~~~ 75 (542)
T 4b1b_A 44 DYVVIGGGPGGMASAKEAAAHGA-RVLLFDYVK 75 (542)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTC-CEEEECCCC
T ss_pred CEEEECCCHHHHHHHHHHHHCCC-eEEEEeccc
Confidence 59999999999999999999996 688888644
No 437
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=82.59 E-value=0.74 Score=52.29 Aligned_cols=35 Identities=29% Similarity=0.528 Sum_probs=32.1
Q ss_pred HhcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcC
Q 002073 573 LEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDD 612 (972)
Q Consensus 573 L~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~ 612 (972)
+..++|+|+|+|++|..+++.|...|+ ++++++|.
T Consensus 165 l~g~~VlIiGaG~iG~~~a~~l~~~G~-----~~V~v~~r 199 (404)
T 1gpj_A 165 LHDKTVLVVGAGEMGKTVAKSLVDRGV-----RAVLVANR 199 (404)
T ss_dssp CTTCEEEEESCCHHHHHHHHHHHHHCC-----SEEEEECS
T ss_pred ccCCEEEEEChHHHHHHHHHHHHHCCC-----CEEEEEeC
Confidence 578999999999999999999999998 79999864
No 438
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=82.58 E-value=3.4 Score=47.68 Aligned_cols=97 Identities=13% Similarity=0.086 Sum_probs=60.6
Q ss_pred HHHHhhcCeEEEEcCChH-HHHHHHHHHH--hcC--CEEEEEeCCccCccCCccccccCcCccCchHHHHHH---HHH-H
Q 002073 172 TMRRLFASNILVSGMQGL-GAEIAKNLIL--AGV--KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASV---QKL-Q 242 (972)
Q Consensus 172 ~q~kL~~s~VlIvG~gGl-G~EiaKNLvL--aGV--g~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~---~~L-~ 242 (972)
+|.+ ..+|.|+|+|++ |..++..|+. .+. .+|+|+|-+. |+.|++... +.+ .
T Consensus 3 ~m~~--~~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~~-----------------~~e~~~~~~~~~~~~~~ 63 (450)
T 1s6y_A 3 AMDK--RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPE-----------------GKEKLEIVGALAKRMVE 63 (450)
T ss_dssp ------CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGG-----------------GHHHHHHHHHHHHHHHH
T ss_pred cccC--CCEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcCC-----------------ChHHHHHHHHHHHHHHh
Confidence 4544 458999999999 7788888887 554 6799998422 224544422 222 3
Q ss_pred HhcCCCEEEEeecCCChhhhcCCceEEEcCCC--HHHHHHHHHHHHhcC
Q 002073 243 ELNNAVVLSTLTSKLTKEQLSDFQAVVFTDIS--LDKAIEFDDFCHNHQ 289 (972)
Q Consensus 243 eLNp~V~V~~~~~~l~~e~l~~fdvVV~~~~~--~~~~~~ln~~c~~~~ 289 (972)
..+..++|....+ + .+.+++.|+||.+... .+.+.+...+..+++
T Consensus 64 ~~~~~~~i~~t~D-~-~eal~gAD~VVitagv~~~~~~~rd~~ip~~~g 110 (450)
T 1s6y_A 64 KAGVPIEIHLTLD-R-RRALDGADFVTTQFRVGGLEARAKDERIPLKYG 110 (450)
T ss_dssp HTTCCCEEEEESC-H-HHHHTTCSEEEECCCTTHHHHHHHHHHTGGGGT
T ss_pred hcCCCcEEEEeCC-H-HHHhCCCCEEEEcCCCCCCcchhhhhhhhhhcC
Confidence 4455667765321 1 3568899999998763 334556566667777
No 439
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=82.51 E-value=1.2 Score=47.50 Aligned_cols=35 Identities=20% Similarity=0.390 Sum_probs=29.5
Q ss_pred HhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 573 LEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 573 L~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
+.+++++|.|+ |+||.++++.|+..|. +++++|.+
T Consensus 27 ~~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~ 62 (283)
T 1g0o_A 27 LEGKVALVTGAGRGIGREMAMELGRRGC------KVIVNYAN 62 (283)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 56778999985 8899999999999997 78887643
No 440
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=82.45 E-value=1.8 Score=46.66 Aligned_cols=35 Identities=17% Similarity=0.324 Sum_probs=28.1
Q ss_pred cCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 575 DAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 575 ~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
+.+|+|.|+ |.||..+++.|+..|-+ -+++++|..
T Consensus 3 ~m~vlVTGatG~iG~~l~~~L~~~g~~----~~V~~~~r~ 38 (336)
T 2hun_A 3 SMKLLVTGGMGFIGSNFIRYILEKHPD----WEVINIDKL 38 (336)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCTT----CEEEEEECC
T ss_pred CCeEEEECCCchHHHHHHHHHHHhCCC----CEEEEEecC
Confidence 468999995 99999999999999730 278887754
No 441
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=82.43 E-value=1.2 Score=47.32 Aligned_cols=34 Identities=18% Similarity=0.198 Sum_probs=28.4
Q ss_pred HhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcC
Q 002073 573 LEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDD 612 (972)
Q Consensus 573 L~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~ 612 (972)
+.+++|+|.|+ |+||.++++.|+..|. ++++++.
T Consensus 42 l~~k~vlITGasggIG~~la~~L~~~G~------~V~~~~r 76 (285)
T 2c07_A 42 GENKVALVTGAGRGIGREIAKMLAKSVS------HVICISR 76 (285)
T ss_dssp CSSCEEEEESTTSHHHHHHHHHHTTTSS------EEEEEES
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHcCC------EEEEEcC
Confidence 45678999995 8999999999999987 7777653
No 442
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=82.42 E-value=0.65 Score=50.12 Aligned_cols=33 Identities=21% Similarity=0.270 Sum_probs=29.0
Q ss_pred cCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 575 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 575 ~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
..||+|||+|++|+.++..|++.|. +++++|.+
T Consensus 2 ~mkI~iiGaGa~G~~~a~~L~~~g~------~V~~~~r~ 34 (294)
T 3g17_A 2 SLSVAIIGPGAVGTTIAYELQQSLP------HTTLIGRH 34 (294)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHHCT------TCEEEESS
T ss_pred CcEEEEECCCHHHHHHHHHHHHCCC------eEEEEEec
Confidence 4689999999999999999999996 78888765
No 443
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=82.42 E-value=0.59 Score=48.24 Aligned_cols=31 Identities=13% Similarity=0.362 Sum_probs=26.5
Q ss_pred CeEEEEcCChHHHHHHHHHHHhcCCEEEE-EeC
Q 002073 179 SNILVSGMQGLGAEIAKNLILAGVKSVTL-HDE 210 (972)
Q Consensus 179 s~VlIvG~gGlG~EiaKNLvLaGVg~itL-vD~ 210 (972)
.+|.|||+|.+|..+|+.|...|. .+++ +|.
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~-~V~~v~~r 55 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQI-PAIIANSR 55 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTC-CEEEECTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-EEEEEECC
Confidence 589999999999999999999997 4555 553
No 444
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=82.38 E-value=1.6 Score=45.35 Aligned_cols=33 Identities=12% Similarity=0.249 Sum_probs=27.7
Q ss_pred hcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcC
Q 002073 574 EDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDD 612 (972)
Q Consensus 574 ~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~ 612 (972)
.+++++|.|+ |+||.++++.|+..|. +++++|.
T Consensus 3 ~~k~~lVTGas~gIG~~ia~~l~~~G~------~V~~~~~ 36 (246)
T 3osu_A 3 MTKSALVTGASRGIGRSIALQLAEEGY------NVAVNYA 36 (246)
T ss_dssp CSCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC------EEEEEeC
Confidence 4567888885 8999999999999998 7777764
No 445
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=82.36 E-value=2.2 Score=45.22 Aligned_cols=36 Identities=22% Similarity=0.395 Sum_probs=31.4
Q ss_pred HhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCCc
Q 002073 573 LEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDV 614 (972)
Q Consensus 573 L~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~ 614 (972)
+++++++|.|+ ||||.++++.|+..|. +++++|.+.
T Consensus 4 l~~k~~lVTGas~GIG~aia~~la~~G~------~V~~~~r~~ 40 (274)
T 3e03_A 4 LSGKTLFITGASRGIGLAIALRAARDGA------NVAIAAKSA 40 (274)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESCC
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC------EEEEEeccc
Confidence 56788999995 8899999999999998 899988764
No 446
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=82.35 E-value=0.87 Score=52.39 Aligned_cols=35 Identities=20% Similarity=0.282 Sum_probs=33.2
Q ss_pred HhhcCeEEEEcCChHHHHHHHHHHHhcC--CEEEEEe
Q 002073 175 RLFASNILVSGMQGLGAEIAKNLILAGV--KSVTLHD 209 (972)
Q Consensus 175 kL~~s~VlIvG~gGlG~EiaKNLvLaGV--g~itLvD 209 (972)
.+++.+|+|+|+||.|..+++.|...|+ ++|+++|
T Consensus 183 ~l~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd 219 (439)
T 2dvm_A 183 KISEITLALFGAGAAGFATLRILTEAGVKPENVRVVE 219 (439)
T ss_dssp CTTTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred CccCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEE
Confidence 4678899999999999999999999999 8999999
No 447
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=82.09 E-value=0.9 Score=48.10 Aligned_cols=32 Identities=25% Similarity=0.286 Sum_probs=29.1
Q ss_pred cEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCc
Q 002073 577 KVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDV 614 (972)
Q Consensus 577 kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~ 614 (972)
||.|||+|.+|+.++..|+..|. +++++|.+.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~------~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGH------EVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC------EEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCC------CEEEEEcCc
Confidence 79999999999999999999987 899998764
No 448
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=82.08 E-value=0.92 Score=48.57 Aligned_cols=71 Identities=11% Similarity=0.256 Sum_probs=49.5
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEeec
Q 002073 176 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTS 255 (972)
Q Consensus 176 L~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~~ 255 (972)
+..++|+|+|+||+|..++..|...| .+|++++.+. .|++..++.+.... .+.+..
T Consensus 117 ~~~~~vlvlGaGg~g~a~a~~L~~~G-~~v~v~~R~~-------------------~~a~~l~~~~~~~~---~~~~~~- 172 (272)
T 1p77_A 117 RPNQHVLILGAGGATKGVLLPLLQAQ-QNIVLANRTF-------------------SKTKELAERFQPYG---NIQAVS- 172 (272)
T ss_dssp CTTCEEEEECCSHHHHTTHHHHHHTT-CEEEEEESSH-------------------HHHHHHHHHHGGGS---CEEEEE-
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCC-CEEEEEECCH-------------------HHHHHHHHHccccC---CeEEee-
Confidence 56789999999999999999999999 8999987432 36666665554321 222221
Q ss_pred CCChhhh--cCCceEEEcCC
Q 002073 256 KLTKEQL--SDFQAVVFTDI 273 (972)
Q Consensus 256 ~l~~e~l--~~fdvVV~~~~ 273 (972)
+ +.+ .++|+||.|..
T Consensus 173 -~--~~~~~~~~DivIn~t~ 189 (272)
T 1p77_A 173 -M--DSIPLQTYDLVINATS 189 (272)
T ss_dssp -G--GGCCCSCCSEEEECCC
T ss_pred -H--HHhccCCCCEEEECCC
Confidence 1 122 37899988764
No 449
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=81.99 E-value=6.7 Score=45.60 Aligned_cols=34 Identities=15% Similarity=0.177 Sum_probs=28.9
Q ss_pred cCeEEEEc-CChHHHHHHHHHHHhcCCEEEEEeCCc
Q 002073 178 ASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEGT 212 (972)
Q Consensus 178 ~s~VlIvG-~gGlG~EiaKNLvLaGVg~itLvD~d~ 212 (972)
..+|||.| .|.+|..+++.|...|. +|+.++...
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~-~V~~l~R~~ 181 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGH-EVIQLVRKE 181 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCC
Confidence 45899999 68999999999999997 788887543
No 450
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=81.98 E-value=1.3 Score=51.11 Aligned_cols=105 Identities=14% Similarity=0.128 Sum_probs=0.0
Q ss_pred HhcCcEEEEcCCcc--hHHHHHHHHHcc--ccCCCCceEEEEcCCc--ccccCCCcccccccCcccccHHHHHHHHHHhh
Q 002073 573 LEDAKVFIVGSGAL--GCEFLKNVALMG--VSCGNQGKLTITDDDV--IEKSNLSRQFLFRDWNIGQAKSTVAASAATSI 646 (972)
Q Consensus 573 L~~~kVlIVGaGgi--G~e~lknLa~~G--v~~~~~g~i~iiD~D~--Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~i 646 (972)
+++.||.|||+|.+ |..++..|+..- . |+|+++|-|. ++..+.....+..
T Consensus 3 m~~~KIaVIGaGs~g~g~~la~~l~~~~~~~-----geV~L~Di~~e~le~~~~~~~~l~~------------------- 58 (450)
T 3fef_A 3 LDQIKIAYIGGGSQGWARSLMSDLSIDERMS-----GTVALYDLDFEAAQKNEVIGNHSGN------------------- 58 (450)
T ss_dssp CCCEEEEEETTTCSSHHHHHHHHHHHCSSCC-----EEEEEECSSHHHHHHHHHHHTTSTT-------------------
T ss_pred CCCCEEEEECCChhHhHHHHHHHHHhccccC-----CeEEEEeCCHHHHHHHHHHHHHHhc-------------------
Q ss_pred CCCcEEEEeecccCCCcccccchhccCCCcEEEEcc--CChHHHHHHhhhhhccccceEecccCCccc
Q 002073 647 NPRLNIEALQNRVGPETENVFDDTFWENITCVINAL--DNVNARLYVDQRCLYFQKPLLESGTLGAKC 712 (972)
Q Consensus 647 nP~~~I~~~~~~v~~~~e~i~~~~f~~~~DvVi~al--Dn~~aR~~v~~~c~~~~kPli~sgt~G~~G 712 (972)
...+|++..+. .+-+++.|+||.++ ...++|..-.+...+++.-=--+-|.|..|
T Consensus 59 -~~~~I~~TtD~----------~eAl~dADfVI~airvG~~~~~~~De~ip~k~G~~~~vget~g~GG 115 (450)
T 3fef_A 59 -GRWRYEAVSTL----------KKALSAADIVIISILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGG 115 (450)
T ss_dssp -SCEEEEEESSH----------HHHHTTCSEEEECCCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHH
T ss_pred -cCCeEEEECCH----------HHHhcCCCEEEeccccCCcccchhhhhhhhccCccccchhhcCCch
No 451
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=81.95 E-value=1.3 Score=47.95 Aligned_cols=36 Identities=19% Similarity=0.410 Sum_probs=32.8
Q ss_pred HhhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCC
Q 002073 175 RLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 211 (972)
Q Consensus 175 kL~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d 211 (972)
.|.+++|+|+|+|++|..+|+.|...|. +|+++|..
T Consensus 152 ~l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~dr~ 187 (293)
T 3d4o_A 152 TIHGANVAVLGLGRVGMSVARKFAALGA-KVKVGARE 187 (293)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECC
Confidence 4778999999999999999999999998 89999863
No 452
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=81.91 E-value=4.6 Score=42.39 Aligned_cols=103 Identities=14% Similarity=0.117 Sum_probs=57.3
Q ss_pred eEEEEc-CChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEeecCCC
Q 002073 180 NILVSG-MQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKLT 258 (972)
Q Consensus 180 ~VlIvG-~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~~~l~ 258 (972)
+|||.| .|.+|..+++.|...|. +|+.++... .|+.. .+.+.+.+++..+++-|+.-.. ..
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~--------------~D~~d--~~~~~~~~~~~~~d~vi~~a~~-~~ 68 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELNPEEY-DIYPFDKKL--------------LDITN--ISQVQQVVQEIRPHIIIHCAAY-TK 68 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSCTTTE-EEEEECTTT--------------SCTTC--HHHHHHHHHHHCCSEEEECCCC-CC
T ss_pred EEEEECCCCHHHHHHHHHHHhCCC-EEEEecccc--------------cCCCC--HHHHHHHHHhcCCCEEEECCcc-cC
Confidence 799999 59999999999999995 788887622 23322 2334444444444333322111 00
Q ss_pred hhh-hcCCceEEEcCCCHHHHHHHHHHHHhcCCCceeEEeeecceeE
Q 002073 259 KEQ-LSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIKAEVRGLFG 304 (972)
Q Consensus 259 ~e~-l~~fdvVV~~~~~~~~~~~ln~~c~~~~~~IpfI~a~~~G~~G 304 (972)
... ....+-.+ ..+......+-+.|++.+ +.||..++.+.+|
T Consensus 69 ~~~~~~~~~~~~--~~n~~~~~~l~~~~~~~~--~~~v~~SS~~vy~ 111 (287)
T 3sc6_A 69 VDQAEKERDLAY--VINAIGARNVAVASQLVG--AKLVYISTDYVFQ 111 (287)
T ss_dssp HHHHTTCHHHHH--HHHTHHHHHHHHHHHHHT--CEEEEEEEGGGSC
T ss_pred hHHHhcCHHHHH--HHHHHHHHHHHHHHHHcC--CeEEEEchhhhcC
Confidence 000 00000000 001122345677888888 7899988877665
No 453
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=81.88 E-value=2.4 Score=44.91 Aligned_cols=50 Identities=26% Similarity=0.246 Sum_probs=29.7
Q ss_pred hhhhhhhc-cCHHHHH-HhhcCeEEEEc-CChHHHHHHHHHHHhcCCEEEEEeC
Q 002073 160 LHSRQLAV-YGRETMR-RLFASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDE 210 (972)
Q Consensus 160 ~YsRQi~l-~G~e~q~-kL~~s~VlIvG-~gGlG~EiaKNLvLaGVg~itLvD~ 210 (972)
.|.|+.+- +|...|. .|+++.|+|.| .||+|.++|+.|+..|. +|.++|.
T Consensus 8 ~~~~~~~~~~gp~~m~~~l~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r 60 (270)
T 3ftp_A 8 HMGTLEAQTQGPGSMDKTLDKQVAIVTGASRGIGRAIALELARRGA-MVIGTAT 60 (270)
T ss_dssp ---------------CCTTTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred ccccccCCCCCCcccccCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 34444443 6665554 47777888887 57999999999999998 6777764
No 454
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=81.84 E-value=3.1 Score=44.04 Aligned_cols=32 Identities=28% Similarity=0.363 Sum_probs=27.6
Q ss_pred eEEEEcC-ChHHHHHHHHHHHhcCCEEEEEeCC
Q 002073 180 NILVSGM-QGLGAEIAKNLILAGVKSVTLHDEG 211 (972)
Q Consensus 180 ~VlIvG~-gGlG~EiaKNLvLaGVg~itLvD~d 211 (972)
+|||.|. |++|..+++.|...|...|++++..
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~ 33 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNL 33 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECC
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccC
Confidence 5899997 8999999999999996678888754
No 455
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=81.81 E-value=2.2 Score=45.85 Aligned_cols=100 Identities=19% Similarity=0.228 Sum_probs=0.0
Q ss_pred hcCcEEEEcC-CcchHHHHHHHH-HccccCCCCceEE-EEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCc
Q 002073 574 EDAKVFIVGS-GALGCEFLKNVA-LMGVSCGNQGKLT-ITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRL 650 (972)
Q Consensus 574 ~~~kVlIVGa-GgiG~e~lknLa-~~Gv~~~~~g~i~-iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~ 650 (972)
++.||.|+|| |.+|..+++.+. .-|+ +|+ ++|.+.-...--.-.-+..-...|
T Consensus 4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~~~------elva~~d~~~~~~~g~d~~~~~g~~~~~------------------ 59 (273)
T 1dih_A 4 ANIRVAIAGAGGRMGRQLIQAALALEGV------QLGAALEREGSSLLGSDAGELAGAGKTG------------------ 59 (273)
T ss_dssp CBEEEEETTTTSHHHHHHHHHHHHSTTE------ECCCEECCTTCTTCSCCTTCSSSSSCCS------------------
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCCC------EEEEEEecCchhhhhhhHHHHcCCCcCC------------------
Q ss_pred EEEEeecccCCCcccccchhccCCCcEEEEccCChHHHHHHhhhhhccccceEecccCCc
Q 002073 651 NIEALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLESGTLGA 710 (972)
Q Consensus 651 ~I~~~~~~v~~~~e~i~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~~~kPli~sgt~G~ 710 (972)
-+...++ ++.+...|+||+++ ++.+-...-..|...++|++ .||.|+
T Consensus 60 ---------v~~~~dl--~~~l~~~DvVIDft-~p~~~~~~~~~a~~~G~~vV-igTtG~ 106 (273)
T 1dih_A 60 ---------VTVQSSL--DAVKDDFDVFIDFT-RPEGTLNHLAFCRQHGKGMV-IGTTGF 106 (273)
T ss_dssp ---------CCEESCS--TTTTTSCSEEEECS-CHHHHHHHHHHHHHTTCEEE-ECCCCC
T ss_pred ---------ceecCCH--HHHhcCCCEEEEcC-ChHHHHHHHHHHHhCCCCEE-EECCCC
No 456
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=81.81 E-value=4.8 Score=42.81 Aligned_cols=67 Identities=19% Similarity=0.335 Sum_probs=44.6
Q ss_pred hhcCeEEEEc-CChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEee
Q 002073 176 LFASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLT 254 (972)
Q Consensus 176 L~~s~VlIvG-~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~ 254 (972)
|++++|+|.| .+|+|.++|+.|+..|. +|.++|.+.-....+. .+.+...+.+.+..+ .+..+.
T Consensus 7 l~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~------------~~~~~~~~~~~~~~~--~~~~~~ 71 (285)
T 3sc4_A 7 LRGKTMFISGGSRGIGLAIAKRVAADGA-NVALVAKSAEPHPKLP------------GTIYTAAKEIEEAGG--QALPIV 71 (285)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSC------------CCHHHHHHHHHHHTS--EEEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECChhhhhhhh------------HHHHHHHHHHHhcCC--cEEEEE
Confidence 6778899998 57999999999999998 7888886543322221 134455556666544 444444
Q ss_pred cCC
Q 002073 255 SKL 257 (972)
Q Consensus 255 ~~l 257 (972)
.++
T Consensus 72 ~Dv 74 (285)
T 3sc4_A 72 GDI 74 (285)
T ss_dssp CCT
T ss_pred CCC
Confidence 333
No 457
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=81.76 E-value=0.9 Score=49.43 Aligned_cols=32 Identities=19% Similarity=0.291 Sum_probs=27.6
Q ss_pred cCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 575 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 575 ~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
+.||+|||+|++|+.++..|+ .|. ++++++.+
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~g~------~V~~~~r~ 33 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-LYH------DVTVVTRR 33 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTS------EEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHh-cCC------ceEEEECC
Confidence 468999999999999999999 875 78888643
No 458
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=81.76 E-value=1.4 Score=42.39 Aligned_cols=41 Identities=20% Similarity=0.161 Sum_probs=29.9
Q ss_pred HHHHHhhcCeEEEEcC----ChHHHHHHHHHHHhcCCEEEEEeCCc
Q 002073 171 ETMRRLFASNILVSGM----QGLGAEIAKNLILAGVKSVTLHDEGT 212 (972)
Q Consensus 171 e~q~kL~~s~VlIvG~----gGlG~EiaKNLvLaGVg~itLvD~d~ 212 (972)
.+-.-++..+|.|||+ |.+|..+++||...|. .+.-+|+..
T Consensus 7 ~~~~l~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~-~V~~vnp~~ 51 (138)
T 1y81_A 7 HGSNSKEFRKIALVGASKNPAKYGNIILKDLLSKGF-EVLPVNPNY 51 (138)
T ss_dssp -------CCEEEEETCCSCTTSHHHHHHHHHHHTTC-EEEEECTTC
T ss_pred ccccccCCCeEEEEeecCCCCCHHHHHHHHHHHCCC-EEEEeCCCC
Confidence 3445677889999999 9999999999999999 477777653
No 459
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=81.67 E-value=0.88 Score=49.15 Aligned_cols=35 Identities=23% Similarity=0.507 Sum_probs=30.9
Q ss_pred HhcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 573 LEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 573 L~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
|..++|+|||+|.+|..+++.|...|. +++++|..
T Consensus 153 l~g~~v~IiG~G~iG~~~a~~l~~~G~------~V~~~dr~ 187 (293)
T 3d4o_A 153 IHGANVAVLGLGRVGMSVARKFAALGA------KVKVGARE 187 (293)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHhCCC------EEEEEECC
Confidence 567899999999999999999999987 78888754
No 460
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=81.61 E-value=0.94 Score=49.68 Aligned_cols=33 Identities=27% Similarity=0.317 Sum_probs=29.1
Q ss_pred cCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 575 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 575 ~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
..||.|||+|++|+.++..|+..|. +++++|.+
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~------~V~~~~r~ 36 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQ------SVLAWDID 36 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC------EEEEECSC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCC------EEEEEeCC
Confidence 3689999999999999999999987 78888754
No 461
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=81.50 E-value=1.9 Score=45.30 Aligned_cols=37 Identities=30% Similarity=0.488 Sum_probs=31.1
Q ss_pred HHHhhcCeEEEEc-CChHHHHHHHHHHHhcCCEEEEEeC
Q 002073 173 MRRLFASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDE 210 (972)
Q Consensus 173 q~kL~~s~VlIvG-~gGlG~EiaKNLvLaGVg~itLvD~ 210 (972)
|..|++++|+|.| .||+|.++|+.|+..|. +|.++|.
T Consensus 5 m~~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r 42 (262)
T 3pk0_A 5 MFDLQGRSVVVTGGTKGIGRGIATVFARAGA-NVAVAGR 42 (262)
T ss_dssp TTCCTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 3457788899987 68999999999999998 7888774
No 462
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=81.50 E-value=0.97 Score=46.74 Aligned_cols=33 Identities=30% Similarity=0.401 Sum_probs=30.2
Q ss_pred cCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 575 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 575 ~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
...|+|||+|..|++.|..|++.|+ +++|+|..
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~------~v~lie~~ 35 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGV------RVGLLTQS 35 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC------CEEEEESC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC------CEEEEecC
Confidence 4689999999999999999999998 89998875
No 463
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=81.49 E-value=1.6 Score=49.02 Aligned_cols=37 Identities=16% Similarity=0.177 Sum_probs=33.1
Q ss_pred HhhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCC
Q 002073 175 RLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 211 (972)
Q Consensus 175 kL~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d 211 (972)
.|.+++|.|||+|.+|..+|+.|...|..+|..+|..
T Consensus 161 ~l~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~ 197 (364)
T 2j6i_A 161 DIEGKTIATIGAGRIGYRVLERLVPFNPKELLYYDYQ 197 (364)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHGGGCCSEEEEECSS
T ss_pred cCCCCEEEEECcCHHHHHHHHHHHhCCCcEEEEECCC
Confidence 5899999999999999999999998998668888853
No 464
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=81.36 E-value=1.3 Score=48.37 Aligned_cols=35 Identities=11% Similarity=0.275 Sum_probs=31.2
Q ss_pred HHhcCcEEEEcCCc-chHHHHHHHHHccccCCCCceEEEEcC
Q 002073 572 KLEDAKVFIVGSGA-LGCEFLKNVALMGVSCGNQGKLTITDD 612 (972)
Q Consensus 572 kL~~~kVlIVGaGg-iG~e~lknLa~~Gv~~~~~g~i~iiD~ 612 (972)
.|..++++|||.|+ +|..+++.|..+|. ++++.+.
T Consensus 162 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gA------tVtv~~~ 197 (300)
T 4a26_A 162 EMAGKRAVVLGRSNIVGAPVAALLMKENA------TVTIVHS 197 (300)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTC------EEEEECT
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCC------eEEEEeC
Confidence 46789999999998 79999999999998 7888864
No 465
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=81.34 E-value=3.6 Score=44.76 Aligned_cols=32 Identities=22% Similarity=0.360 Sum_probs=28.5
Q ss_pred CcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 576 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 576 ~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
+||.+||+|..|..+++||+..|. .+++.|.+
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~------~v~v~dr~ 35 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGY------LLNVFDLV 35 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC------EEEEECSS
T ss_pred CEEEEeeehHHHHHHHHHHHhCCC------eEEEEcCC
Confidence 479999999999999999999998 78888643
No 466
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=81.32 E-value=0.98 Score=48.36 Aligned_cols=32 Identities=28% Similarity=0.366 Sum_probs=28.6
Q ss_pred CcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 576 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 576 ~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
.||.|||+|.+|+.++..|+..|. +++++|.+
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~------~V~~~~r~ 35 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGN------DVTLIDQW 35 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC------EEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCC------cEEEEECC
Confidence 589999999999999999999986 78888754
No 467
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=81.28 E-value=0.91 Score=49.18 Aligned_cols=35 Identities=17% Similarity=0.431 Sum_probs=31.0
Q ss_pred HhcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 573 LEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 573 L~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
|..++|+|||+|.+|..+++.|...|. +++++|.+
T Consensus 155 l~g~~v~IiG~G~iG~~~a~~l~~~G~------~V~~~d~~ 189 (300)
T 2rir_A 155 IHGSQVAVLGLGRTGMTIARTFAALGA------NVKVGARS 189 (300)
T ss_dssp STTSEEEEECCSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred CCCCEEEEEcccHHHHHHHHHHHHCCC------EEEEEECC
Confidence 567899999999999999999999987 88888754
No 468
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=81.22 E-value=7.7 Score=40.87 Aligned_cols=36 Identities=19% Similarity=0.314 Sum_probs=31.2
Q ss_pred HhhcCeEEEEc-CChHHHHHHHHHHHhcCCEEEEEeCC
Q 002073 175 RLFASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEG 211 (972)
Q Consensus 175 kL~~s~VlIvG-~gGlG~EiaKNLvLaGVg~itLvD~d 211 (972)
+|.+++|+|.| .+|+|.++|+.|+..|. ++.++|..
T Consensus 8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~-~V~~~~r~ 44 (277)
T 3tsc_A 8 KLEGRVAFITGAARGQGRAHAVRMAAEGA-DIIAVDIA 44 (277)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred ccCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEecc
Confidence 57888999998 57999999999999998 68888753
No 469
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=81.17 E-value=3.9 Score=43.31 Aligned_cols=35 Identities=31% Similarity=0.376 Sum_probs=27.8
Q ss_pred HhhcCeEEEEcC-ChHHHHHHHHHHHhcCCEEEEEeC
Q 002073 175 RLFASNILVSGM-QGLGAEIAKNLILAGVKSVTLHDE 210 (972)
Q Consensus 175 kL~~s~VlIvG~-gGlG~EiaKNLvLaGVg~itLvD~ 210 (972)
.+++++|+|.|. ||+|.++|+.|+..|. +|.+++.
T Consensus 9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~-~V~~~~r 44 (311)
T 3o26_A 9 VTKRRCAVVTGGNKGIGFEICKQLSSNGI-MVVLTCR 44 (311)
T ss_dssp ---CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCcEEEEecCCchHHHHHHHHHHHCCC-EEEEEeC
Confidence 456788899885 8999999999999998 7888764
No 470
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=81.16 E-value=1.1 Score=48.23 Aligned_cols=33 Identities=12% Similarity=0.164 Sum_probs=30.3
Q ss_pred HhcCcEEEEcCCc-chHHHHHHHHHccccCCCCceEEEEc
Q 002073 573 LEDAKVFIVGSGA-LGCEFLKNVALMGVSCGNQGKLTITD 611 (972)
Q Consensus 573 L~~~kVlIVGaGg-iG~e~lknLa~~Gv~~~~~g~i~iiD 611 (972)
|..++++|||.|+ +|..+++.|..+|. ++++.+
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~gA------tVtv~~ 181 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRNY------TVSVCH 181 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTTC------EEEEEC
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCCC------eEEEEe
Confidence 8899999999987 79999999999998 788885
No 471
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=81.16 E-value=1.1 Score=47.35 Aligned_cols=35 Identities=17% Similarity=0.423 Sum_probs=29.5
Q ss_pred HHhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcC
Q 002073 572 KLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDD 612 (972)
Q Consensus 572 kL~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~ 612 (972)
.|.+++++|.|+ ||||.++++.|+..|. +++++|.
T Consensus 15 ~l~~k~~lVTGas~gIG~aia~~l~~~G~------~V~~~~~ 50 (270)
T 3is3_A 15 RLDGKVALVTGSGRGIGAAVAVHLGRLGA------KVVVNYA 50 (270)
T ss_dssp CCTTCEEEESCTTSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHCCC------EEEEEcC
Confidence 466788999995 7899999999999998 7777654
No 472
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=81.10 E-value=4.1 Score=42.90 Aligned_cols=36 Identities=33% Similarity=0.340 Sum_probs=28.1
Q ss_pred HhhcCeEEEEc-CChHHHHHHHHHHHhcCCEEEEEeCC
Q 002073 175 RLFASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEG 211 (972)
Q Consensus 175 kL~~s~VlIvG-~gGlG~EiaKNLvLaGVg~itLvD~d 211 (972)
+-..++|||.| .|.+|..+++.|...|. +|++++..
T Consensus 9 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 45 (292)
T 1vl0_A 9 HHHHMKILITGANGQLGREIQKQLKGKNV-EVIPTDVQ 45 (292)
T ss_dssp ---CEEEEEESTTSHHHHHHHHHHTTSSE-EEEEECTT
T ss_pred ccccceEEEECCCChHHHHHHHHHHhCCC-eEEeccCc
Confidence 44567899997 58899999999999994 78888764
No 473
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=81.02 E-value=0.99 Score=49.34 Aligned_cols=35 Identities=20% Similarity=0.295 Sum_probs=30.9
Q ss_pred cCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCc
Q 002073 575 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDV 614 (972)
Q Consensus 575 ~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~ 614 (972)
..||.|||+|.+|+.++..|+..|+ .+++++|.+.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~-----~~V~l~D~~~ 38 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNL-----ADVVLFDIAE 38 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTC-----CEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-----ceEEEEeCCc
Confidence 3689999999999999999999998 5799998653
No 474
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=80.92 E-value=1.4 Score=47.68 Aligned_cols=36 Identities=22% Similarity=0.385 Sum_probs=32.8
Q ss_pred HhhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCC
Q 002073 175 RLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 211 (972)
Q Consensus 175 kL~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d 211 (972)
.|..++|+|+|+|++|..+|+.|...|. +|+++|..
T Consensus 154 ~l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~d~~ 189 (300)
T 2rir_A 154 TIHGSQVAVLGLGRTGMTIARTFAALGA-NVKVGARS 189 (300)
T ss_dssp CSTTSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCCCCEEEEEcccHHHHHHHHHHHHCCC-EEEEEECC
Confidence 4778999999999999999999999998 89999864
No 475
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=80.89 E-value=5.2 Score=41.93 Aligned_cols=35 Identities=23% Similarity=0.355 Sum_probs=29.7
Q ss_pred HhhcCeEEEEc-CChHHHHHHHHHHHhcCCEEEEEeC
Q 002073 175 RLFASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDE 210 (972)
Q Consensus 175 kL~~s~VlIvG-~gGlG~EiaKNLvLaGVg~itLvD~ 210 (972)
.|.+++|+|.| .+|+|.++|+.|+..|. +|.+.|.
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r 43 (264)
T 3ucx_A 8 LLTDKVVVISGVGPALGTTLARRCAEQGA-DLVLAAR 43 (264)
T ss_dssp TTTTCEEEEESCCTTHHHHHHHHHHHTTC-EEEEEES
T ss_pred CcCCcEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeC
Confidence 46788899998 57899999999999998 5887764
No 476
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=80.88 E-value=1.7 Score=47.14 Aligned_cols=34 Identities=18% Similarity=0.368 Sum_probs=30.4
Q ss_pred HHhcCcEEEEcCCc-chHHHHHHHHHccccCCCCceEEEEc
Q 002073 572 KLEDAKVFIVGSGA-LGCEFLKNVALMGVSCGNQGKLTITD 611 (972)
Q Consensus 572 kL~~~kVlIVGaGg-iG~e~lknLa~~Gv~~~~~g~i~iiD 611 (972)
.|..++++|||.|+ +|..++..|...|. ++++.+
T Consensus 157 ~l~Gk~vvVvGrs~iVG~p~A~lL~~~gA------tVtv~h 191 (285)
T 3p2o_A 157 DLEGKDAVIIGASNIVGRPMATMLLNAGA------TVSVCH 191 (285)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTC------EEEEEC
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCC------eEEEEe
Confidence 46789999999988 69999999999998 788886
No 477
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=80.71 E-value=4.4 Score=44.18 Aligned_cols=76 Identities=12% Similarity=0.100 Sum_probs=48.8
Q ss_pred eEEEEcC-ChHHHHHHHHHHHhcC-CEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhc----CCCEEEEe
Q 002073 180 NILVSGM-QGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELN----NAVVLSTL 253 (972)
Q Consensus 180 ~VlIvG~-gGlG~EiaKNLvLaGV-g~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLN----p~V~V~~~ 253 (972)
+|+|+|+ |.+|..++..|+..|. .++.|+|.. . ...|++..+.-|.... ..+++..-
T Consensus 2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~----~-------------~~~~~~~~~~dl~~~~~~~~~~~~i~~~ 64 (313)
T 1hye_A 2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGRE----H-------------SINKLEGLREDIYDALAGTRSDANIYVE 64 (313)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECG----G-------------GHHHHHHHHHHHHHHHTTSCCCCEEEEE
T ss_pred EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCC----C-------------chhhhHHHHHHHHHhHHhcCCCeEEEeC
Confidence 7999999 9999999999998885 568988840 0 0123443333344333 34455542
Q ss_pred ecCCChhhhcCCceEEEcCC
Q 002073 254 TSKLTKEQLSDFQAVVFTDI 273 (972)
Q Consensus 254 ~~~l~~e~l~~fdvVV~~~~ 273 (972)
++.+ .+.+++.|+||.+..
T Consensus 65 ~d~l-~~al~gaD~Vi~~Ag 83 (313)
T 1hye_A 65 SDEN-LRIIDESDVVIITSG 83 (313)
T ss_dssp ETTC-GGGGTTCSEEEECCS
T ss_pred Ccch-HHHhCCCCEEEECCC
Confidence 2222 346889999998753
No 478
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=80.71 E-value=3.5 Score=43.37 Aligned_cols=95 Identities=11% Similarity=0.048 Sum_probs=55.2
Q ss_pred cEEEEcC-CcchHHHHHHHHHc-cccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCcEEEE
Q 002073 577 KVFIVGS-GALGCEFLKNVALM-GVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEA 654 (972)
Q Consensus 577 kVlIVGa-GgiG~e~lknLa~~-Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~~I~~ 654 (972)
+|+|.|+ |.||..+++.|+.. |. ++++++.+.-....+ ..+. ++.
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~g~------~V~~~~R~~~~~~~~-------------------------~~~~--v~~ 48 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHID------HFHIGVRNVEKVPDD-------------------------WRGK--VSV 48 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCT------TEEEEESSGGGSCGG-------------------------GBTT--BEE
T ss_pred EEEEEcCCchHHHHHHHHHhhCCCC------cEEEEECCHHHHHHh-------------------------hhCC--CEE
Confidence 7999996 88999999999987 65 777776543111100 0122 334
Q ss_pred eecccCCCcccccchhccCCCcEEEEccCC-------hHHHHHHhhhhhcccc-ceEeccc
Q 002073 655 LQNRVGPETENVFDDTFWENITCVINALDN-------VNARLYVDQRCLYFQK-PLLESGT 707 (972)
Q Consensus 655 ~~~~v~~~~e~i~~~~f~~~~DvVi~alDn-------~~aR~~v~~~c~~~~k-Pli~sgt 707 (972)
+...+... +.+ ...++++|+||++... +..-..+-+.|...++ .++..++
T Consensus 49 ~~~D~~d~-~~l--~~~~~~~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss 106 (289)
T 3e48_A 49 RQLDYFNQ-ESM--VEAFKGMDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGY 106 (289)
T ss_dssp EECCTTCH-HHH--HHHTTTCSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred EEcCCCCH-HHH--HHHHhCCCEEEEeCCCCccchhhHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 44444421 111 3456789999998653 2333345556666654 3554444
No 479
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=80.70 E-value=10 Score=44.19 Aligned_cols=35 Identities=14% Similarity=0.237 Sum_probs=30.7
Q ss_pred hcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCc
Q 002073 177 FASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGT 212 (972)
Q Consensus 177 ~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~ 212 (972)
.+.+|.|||+|.+|..+|.+|+..|. .|+++|.+.
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~G~-~V~v~dr~~ 43 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADHGF-TVCAYNRTQ 43 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence 35689999999999999999999997 789998654
No 480
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=80.61 E-value=6 Score=42.65 Aligned_cols=102 Identities=15% Similarity=0.167 Sum_probs=62.2
Q ss_pred CeEEEEc-CChHHHHHHHHHHHhcC-CEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEeecC
Q 002073 179 SNILVSG-MQGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSK 256 (972)
Q Consensus 179 s~VlIvG-~gGlG~EiaKNLvLaGV-g~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~~~ 256 (972)
.+|||.| .|++|..+++.|...|- .+|+++|...-.. +. +.+.++.. -.++.+..+
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-~~--------------------~~~~~~~~-~~~~~~~~D 62 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAG-NK--------------------ANLEAILG-DRVELVVGD 62 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTC-CG--------------------GGTGGGCS-SSEEEEECC
T ss_pred cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCC-Ch--------------------hHHhhhcc-CCeEEEECC
Confidence 4799998 69999999999999942 3788887532110 00 00111111 234455555
Q ss_pred CCh-----hhhcCCceEEEcCCC--H---------------HHHHHHHHHHHhcCCCceeEEeeecceeE
Q 002073 257 LTK-----EQLSDFQAVVFTDIS--L---------------DKAIEFDDFCHNHQPAISFIKAEVRGLFG 304 (972)
Q Consensus 257 l~~-----e~l~~fdvVV~~~~~--~---------------~~~~~ln~~c~~~~~~IpfI~a~~~G~~G 304 (972)
+++ +.+.++|+||.+... . .....+-+.|++.+ +.||..++.+.+|
T Consensus 63 l~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~--~~~v~~SS~~vyg 130 (348)
T 1oc2_A 63 IADAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD--IRFHHVSTDEVYG 130 (348)
T ss_dssp TTCHHHHHHHHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHT--CEEEEEEEGGGGC
T ss_pred CCCHHHHHHHhhcCCEEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhC--CeEEEecccceeC
Confidence 543 346677888876431 1 11234557788888 7889888877665
No 481
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=80.60 E-value=2.2 Score=45.99 Aligned_cols=31 Identities=32% Similarity=0.552 Sum_probs=26.9
Q ss_pred CcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcC
Q 002073 576 AKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDD 612 (972)
Q Consensus 576 ~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~ 612 (972)
++|+|.|+ |.||..+++.|+..|. +++++|.
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~------~V~~~~r 33 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQGI------DLIVFDN 33 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC------EEEEEEC
T ss_pred cEEEEeCCCchhHHHHHHHHHhCCC------EEEEEeC
Confidence 47999995 8999999999999986 7888864
No 482
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=80.53 E-value=1.3 Score=48.96 Aligned_cols=37 Identities=27% Similarity=0.347 Sum_probs=31.8
Q ss_pred HHHhcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 571 KKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 571 ~kL~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
..|...+|.|||+|.+|..++++|...|+ ++++.|.+
T Consensus 12 ~~l~~~~I~IIG~G~mG~alA~~L~~~G~------~V~~~~~~ 48 (338)
T 1np3_A 12 SIIQGKKVAIIGYGSQGHAHACNLKDSGV------DVTVGLRS 48 (338)
T ss_dssp HHHHTSCEEEECCSHHHHHHHHHHHHTTC------CEEEECCT
T ss_pred chhcCCEEEEECchHHHHHHHHHHHHCcC------EEEEEECC
Confidence 45778899999999999999999999997 67777643
No 483
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=80.50 E-value=5.9 Score=41.95 Aligned_cols=34 Identities=29% Similarity=0.549 Sum_probs=29.4
Q ss_pred hhcCeEEEEcC-ChHHHHHHHHHHHhcCCEEEEEeC
Q 002073 176 LFASNILVSGM-QGLGAEIAKNLILAGVKSVTLHDE 210 (972)
Q Consensus 176 L~~s~VlIvG~-gGlG~EiaKNLvLaGVg~itLvD~ 210 (972)
|.+.+|+|.|. ||+|.++++.|+..|. +|.++|.
T Consensus 26 ~~~k~vlITGasggIG~~la~~l~~~G~-~V~~~~r 60 (286)
T 1xu9_A 26 LQGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTAR 60 (286)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEEC
Confidence 56788999986 8999999999999997 6888774
No 484
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=80.37 E-value=3.2 Score=45.18 Aligned_cols=101 Identities=13% Similarity=0.037 Sum_probs=0.0
Q ss_pred hcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEeecC
Q 002073 177 FASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSK 256 (972)
Q Consensus 177 ~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~~~ 256 (972)
...+|+|+|+|.+|+.+|..|+.+|. .|+++ .+. ..........+.-..|..........
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~-~V~l~-~~~------------------~~~~~i~~~g~~~~~~~~~~~~~~~~ 77 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGH-EVILI-ARP------------------QHVQAIEATGLRLETQSFDEQVKVSA 77 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTC-EEEEE-CCH------------------HHHHHHHHHCEEEECSSCEEEECCEE
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCC-eEEEE-EcH------------------hHHHHHHhCCeEEEcCCCcEEEeeee
Q ss_pred C-ChhhhcCCceEEEcCCCHHHHHHHHHHHHhcCCCceeEEe
Q 002073 257 L-TKEQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIKA 297 (972)
Q Consensus 257 l-~~e~l~~fdvVV~~~~~~~~~~~ln~~c~~~~~~IpfI~a 297 (972)
. +.+.+..+|+||+|.-+......+.++....++...+|..
T Consensus 78 ~~~~~~~~~~D~vilavk~~~~~~~l~~l~~~l~~~~~iv~~ 119 (318)
T 3hwr_A 78 SSDPSAVQGADLVLFCVKSTDTQSAALAMKPALAKSALVLSL 119 (318)
T ss_dssp ESCGGGGTTCSEEEECCCGGGHHHHHHHHTTTSCTTCEEEEE
T ss_pred eCCHHHcCCCCEEEEEcccccHHHHHHHHHHhcCCCCEEEEe
No 485
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=80.36 E-value=5.5 Score=42.99 Aligned_cols=113 Identities=12% Similarity=0.163 Sum_probs=67.1
Q ss_pred cCeEEEEcC-ChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEeecC
Q 002073 178 ASNILVSGM-QGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSK 256 (972)
Q Consensus 178 ~s~VlIvG~-gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~~~ 256 (972)
+.+|+|+|+ |..|..++++|...|..-+..+|+.....+ ..|.+--....+.+.+..+++-+-+....
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~g~~~V~~V~p~~~g~~-----------~~G~~vy~sl~el~~~~~~D~viI~tP~~ 75 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTT-----------HLGLPVFNTVREAVAATGATASVIYVPAP 75 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCE-----------ETTEEEESSHHHHHHHHCCCEEEECCCGG
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCcccce-----------eCCeeccCCHHHHhhcCCCCEEEEecCHH
Confidence 568999999 889999999999999875556776432111 11211111112223333455555544433
Q ss_pred CChhh----h-cCCceEE-EcC-CCHHHHHHHHHHHHhcCCCceeEEeeeccee
Q 002073 257 LTKEQ----L-SDFQAVV-FTD-ISLDKAIEFDDFCHNHQPAISFIKAEVRGLF 303 (972)
Q Consensus 257 l~~e~----l-~~fdvVV-~~~-~~~~~~~~ln~~c~~~~~~IpfI~a~~~G~~ 303 (972)
...+. + .+..++| .+. .+.+...++.++|++++ +.++.-.+.|+.
T Consensus 76 ~~~~~~~ea~~~Gi~~iVi~t~G~~~~~~~~l~~~A~~~g--v~liGPNc~Gi~ 127 (288)
T 2nu8_A 76 FCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAG--VRMIGPNTPGVI 127 (288)
T ss_dssp GHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHHHHT--CEEECSSCCEEE
T ss_pred HHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcC--CEEEecCCccee
Confidence 22222 2 2456544 443 36777779999999999 887766665543
No 486
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=80.34 E-value=3.2 Score=43.74 Aligned_cols=75 Identities=9% Similarity=0.085 Sum_probs=46.4
Q ss_pred HHhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHH-HHHHHHHHhhCCC
Q 002073 572 KLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKS-TVAASAATSINPR 649 (972)
Q Consensus 572 kL~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks-~vaa~~l~~inP~ 649 (972)
.|.+++++|.|+ |+||.++++.|+..|. +++++|.+.-. ..+..+-..|+....+ +.+.+.+.+....
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 74 (264)
T 2dtx_A 5 DLRDKVVIVTGASMGIGRAIAERFVDEGS------KVIDLSIHDPG----EAKYDHIECDVTNPDQVKASIDHIFKEYGS 74 (264)
T ss_dssp GGTTCEEEEESCSSHHHHHHHHHHHHTTC------EEEEEESSCCC----SCSSEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCC------EEEEEecCccc----CCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 366788999995 8999999999999997 78888765422 2233334456665432 2233333333333
Q ss_pred cEEEEee
Q 002073 650 LNIEALQ 656 (972)
Q Consensus 650 ~~I~~~~ 656 (972)
+.+-.+.
T Consensus 75 iD~lv~~ 81 (264)
T 2dtx_A 75 ISVLVNN 81 (264)
T ss_dssp CCEEEEC
T ss_pred CCEEEEC
Confidence 4444333
No 487
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=80.29 E-value=4.9 Score=46.63 Aligned_cols=92 Identities=13% Similarity=0.047 Sum_probs=60.9
Q ss_pred hcCeEEEEcCChH-HHHHHHHHHHh--cC--CEEEEEeCCccCccCCccccccCcCccCchHHHHH----HHHHHHhcCC
Q 002073 177 FASNILVSGMQGL-GAEIAKNLILA--GV--KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALAS----VQKLQELNNA 247 (972)
Q Consensus 177 ~~s~VlIvG~gGl-G~EiaKNLvLa--GV--g~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~----~~~L~eLNp~ 247 (972)
+..+|.|||+|++ |..+|..|+.. +. ..|+|+|-+. .|++.. ...+......
T Consensus 27 ~~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~-------------------e~~~~~~~~~~~~l~~~~~~ 87 (472)
T 1u8x_X 27 KSFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDK-------------------ERQDRIAGACDVFIREKAPD 87 (472)
T ss_dssp CCEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCH-------------------HHHHHHHHHHHHHHHHHCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCH-------------------HHHHHHHHHHHHHhccCCCC
Confidence 4569999999998 66788888887 55 5699998533 122222 1222345556
Q ss_pred CEEEEeecCCChhhhcCCceEEEcCCC--HHHHHHHHHHHHhcC
Q 002073 248 VVLSTLTSKLTKEQLSDFQAVVFTDIS--LDKAIEFDDFCHNHQ 289 (972)
Q Consensus 248 V~V~~~~~~l~~e~l~~fdvVV~~~~~--~~~~~~ln~~c~~~~ 289 (972)
.+|...++ + .+.+++.|+||.+... ...+.+-..+..+++
T Consensus 88 ~~I~~t~D-~-~eal~~AD~VViaag~~~~~g~~rd~~ip~k~g 129 (472)
T 1u8x_X 88 IEFAATTD-P-EEAFTDVDFVMAHIRVGKYAMRALDEQIPLKYG 129 (472)
T ss_dssp SEEEEESC-H-HHHHSSCSEEEECCCTTHHHHHHHHHHHHHTTT
T ss_pred CEEEEECC-H-HHHHcCCCEEEEcCCCccccccchhhhhhhhcC
Confidence 67776421 1 3568899999998763 445556666778888
No 488
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=80.26 E-value=6.6 Score=41.66 Aligned_cols=52 Identities=27% Similarity=0.346 Sum_probs=40.8
Q ss_pred HhhcCeEEEEc-CChHHHHHHHHHHHhcCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcC
Q 002073 175 RLFASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNN 246 (972)
Q Consensus 175 kL~~s~VlIvG-~gGlG~EiaKNLvLaGVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp 246 (972)
.|+++.++|-| .+|+|.++|+.|+..|. +|.++|.+ ..+++.+.+.|++...
T Consensus 4 sL~gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~~-------------------~~~~~~~~~~i~~~g~ 56 (254)
T 4fn4_A 4 SLKNKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVELL-------------------EDRLNQIVQELRGMGK 56 (254)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC-------------------HHHHHHHHHHHHHTTC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECC-------------------HHHHHHHHHHHHhcCC
Confidence 47888899987 67999999999999998 68887742 2366777777777654
No 489
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=80.25 E-value=2.5 Score=45.82 Aligned_cols=36 Identities=28% Similarity=0.303 Sum_probs=28.9
Q ss_pred HHhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 572 KLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 572 kL~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
.+..++|+|.|+ |.||..+++.|+..|. +++++|.+
T Consensus 18 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~------~V~~~~r~ 54 (333)
T 2q1w_A 18 GSHMKKVFITGICGQIGSHIAELLLERGD------KVVGIDNF 54 (333)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEECC
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHCCC------EEEEEECC
Confidence 345678999995 8899999999999986 88888764
No 490
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=80.23 E-value=2.9 Score=43.72 Aligned_cols=35 Identities=17% Similarity=0.356 Sum_probs=29.3
Q ss_pred HhcCcEEEEcCC-c--chHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 573 LEDAKVFIVGSG-A--LGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 573 L~~~kVlIVGaG-g--iG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
+++++++|.|++ + ||.++++.|+..|. +++++|.+
T Consensus 5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~------~V~~~~r~ 42 (266)
T 3oig_A 5 LEGRNIVVMGVANKRSIAWGIARSLHEAGA------RLIFTYAG 42 (266)
T ss_dssp CTTCEEEEECCCSTTSHHHHHHHHHHHTTC------EEEEEESS
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHHHCCC------EEEEecCc
Confidence 567889999974 3 99999999999998 78887653
No 491
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=80.19 E-value=2.4 Score=44.53 Aligned_cols=93 Identities=11% Similarity=0.138 Sum_probs=59.2
Q ss_pred eEEEEcC-ChHHHHHHHHHHHh--cCCEEEEEeCCccCccCCccccccCcCccCchHHHHHHHHHHHhcCCCEEEEeecC
Q 002073 180 NILVSGM-QGLGAEIAKNLILA--GVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSK 256 (972)
Q Consensus 180 ~VlIvG~-gGlG~EiaKNLvLa--GVg~itLvD~d~V~~~DL~~qffl~~~DIGk~RAea~~~~L~eLNp~V~V~~~~~~ 256 (972)
+|+|.|. |.+|..+++.|... |. +|++++.+.- ++. .+.. +.+ +....+
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~-------------------~~~----~l~~--~~~--~~~~~D 53 (287)
T 2jl1_A 2 SIAVTGATGQLGGLVIQHLLKKVPAS-QIIAIVRNVE-------------------KAS----TLAD--QGV--EVRHGD 53 (287)
T ss_dssp CEEETTTTSHHHHHHHHHHTTTSCGG-GEEEEESCTT-------------------TTH----HHHH--TTC--EEEECC
T ss_pred eEEEEcCCchHHHHHHHHHHHhCCCC-eEEEEEcCHH-------------------HHh----HHhh--cCC--eEEEec
Confidence 6899986 99999999999988 75 6777764321 111 1111 223 344445
Q ss_pred CCh-----hhhcCCceEEEcCC-------CHHHHHHHHHHHHhcCCCc-eeEEeeecce
Q 002073 257 LTK-----EQLSDFQAVVFTDI-------SLDKAIEFDDFCHNHQPAI-SFIKAEVRGL 302 (972)
Q Consensus 257 l~~-----e~l~~fdvVV~~~~-------~~~~~~~ln~~c~~~~~~I-pfI~a~~~G~ 302 (972)
+++ +.+++.|+||.+.. +......+-+.|++.+ + .||..++.+.
T Consensus 54 ~~d~~~l~~~~~~~d~vi~~a~~~~~~~~n~~~~~~l~~a~~~~~--~~~~v~~Ss~~~ 110 (287)
T 2jl1_A 54 YNQPESLQKAFAGVSKLLFISGPHYDNTLLIVQHANVVKAARDAG--VKHIAYTGYAFA 110 (287)
T ss_dssp TTCHHHHHHHTTTCSEEEECCCCCSCHHHHHHHHHHHHHHHHHTT--CSEEEEEEETTG
T ss_pred cCCHHHHHHHHhcCCEEEEcCCCCcCchHHHHHHHHHHHHHHHcC--CCEEEEECCCCC
Confidence 532 34667898887653 2334456677888887 5 6787777654
No 492
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=80.19 E-value=1.6 Score=48.13 Aligned_cols=33 Identities=12% Similarity=0.217 Sum_probs=27.5
Q ss_pred CcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 576 AKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 576 ~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
.||+|.|+ |.||..+++.|+..|. -+++.+|.+
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~-----~~v~~~d~~ 34 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTD-----HHIFEVHRQ 34 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCC-----CEEEECCTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-----CEEEEECCC
Confidence 37999995 8899999999999985 477777764
No 493
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=80.16 E-value=2.6 Score=44.91 Aligned_cols=91 Identities=15% Similarity=0.206 Sum_probs=55.4
Q ss_pred HHhcCcEEEEcC-CcchHHHHHHHHHccccCCCCceEEEEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCc
Q 002073 572 KLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRL 650 (972)
Q Consensus 572 kL~~~kVlIVGa-GgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~ 650 (972)
.+++++++|.|+ ||||.++++.|+..|. +++++|.+.-....+. .+.+.+++.+....+
T Consensus 6 ~l~~k~vlVTGas~GIG~aia~~l~~~G~------~V~~~~r~~~~~~~~~------------~~~~~~~~~~~~~~~-- 65 (285)
T 3sc4_A 6 SLRGKTMFISGGSRGIGLAIAKRVAADGA------NVALVAKSAEPHPKLP------------GTIYTAAKEIEEAGG-- 65 (285)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHTTTC------EEEEEESCCSCCSSSC------------CCHHHHHHHHHHHTS--
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEECChhhhhhhh------------HHHHHHHHHHHhcCC--
Confidence 356788999995 8899999999999998 8999887653222221 123334444554443
Q ss_pred EEEEeecccCCCcc--cccc--hhccCCCcEEEEcc
Q 002073 651 NIEALQNRVGPETE--NVFD--DTFWENITCVINAL 682 (972)
Q Consensus 651 ~I~~~~~~v~~~~e--~i~~--~~f~~~~DvVi~al 682 (972)
++..+...++.... ..+. .+-+...|++|++.
T Consensus 66 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnA 101 (285)
T 3sc4_A 66 QALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNA 101 (285)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECC
T ss_pred cEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 55666655653221 1111 11234788888864
No 494
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=80.13 E-value=1.7 Score=49.52 Aligned_cols=70 Identities=20% Similarity=0.322 Sum_probs=53.6
Q ss_pred ccCchhhHhhhhhhhhHhhhhcCCccccceeeEeeeccCCCCCCCCCCccCCccCchhhhhhhcCHHHHHHHhcCcEEEE
Q 002073 502 VLNPMAAMFGGIVGQEVVKACSGKFHPLYQFFYFDSVESLPTEPLDSTEFKPINSRYDAQISVFGAKLQKKLEDAKVFIV 581 (972)
Q Consensus 502 el~PvaA~iGGiaAQEVIKaiTgKf~PI~q~~yfD~~e~Lp~~~~~~~~~~~~~~RYdrqi~l~G~~~q~kL~~~kVlIV 581 (972)
-|+||+-+-|=.+.|+....+ +|+.|+ ..-+ . -.+...+|+|+
T Consensus 154 ~ls~~s~iAGy~Av~~aa~~l-~~~~~~----l~t~---~-----------------------------g~v~~~kV~Vi 196 (405)
T 4dio_A 154 VLSSQANLAGYQAVIDAAYEY-DRALPM----MMTA---A-----------------------------GTVPAAKIFVM 196 (405)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC-SSCSSC----EEET---T-----------------------------EEECCCEEEEE
T ss_pred eecchhHHHHHHHHHHHHHHh-Hhhhch----hhcc---C-----------------------------CCcCCCEEEEE
Confidence 578999999999999999875 444441 1111 0 02457899999
Q ss_pred cCCcchHHHHHHHHHccccCCCCceEEEEcCCc
Q 002073 582 GSGALGCEFLKNVALMGVSCGNQGKLTITDDDV 614 (972)
Q Consensus 582 GaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~ 614 (972)
|+|.+|..+++.+..+|. +++++|.+.
T Consensus 197 G~G~iG~~aa~~a~~lGa------~V~v~D~~~ 223 (405)
T 4dio_A 197 GAGVAGLQAIATARRLGA------VVSATDVRP 223 (405)
T ss_dssp CCSHHHHHHHHHHHHTTC------EEEEECSST
T ss_pred CCcHHHHHHHHHHHHCCC------EEEEEcCCH
Confidence 999999999999999998 788888654
No 495
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=80.09 E-value=1.2 Score=49.48 Aligned_cols=38 Identities=24% Similarity=0.259 Sum_probs=33.6
Q ss_pred HHhhcCeEEEEcCChHHHHHHHHHHHhcCCEEEEEeCCc
Q 002073 174 RRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGT 212 (972)
Q Consensus 174 ~kL~~s~VlIvG~gGlG~EiaKNLvLaGVg~itLvD~d~ 212 (972)
..|.+++|.|||+|.+|..+|+.|...|. +|..+|...
T Consensus 167 ~~l~gktiGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~~ 204 (340)
T 4dgs_A 167 HSPKGKRIGVLGLGQIGRALASRAEAFGM-SVRYWNRST 204 (340)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSC
T ss_pred ccccCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCc
Confidence 46889999999999999999999999998 788888643
No 496
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=80.09 E-value=1.2 Score=48.50 Aligned_cols=34 Identities=18% Similarity=0.312 Sum_probs=30.0
Q ss_pred HHhcCcEEEEcCCc-chHHHHHHHHHccccCCCCceEEEEc
Q 002073 572 KLEDAKVFIVGSGA-LGCEFLKNVALMGVSCGNQGKLTITD 611 (972)
Q Consensus 572 kL~~~kVlIVGaGg-iG~e~lknLa~~Gv~~~~~g~i~iiD 611 (972)
.+..++++|||.|. +|..+++.|...|. ++++.+
T Consensus 156 ~l~gk~vvVIG~s~iVG~p~A~lL~~~gA------tVtv~h 190 (288)
T 1b0a_A 156 DTFGLNAVVIGASNIVGRPMSMELLLAGC------TTTVTH 190 (288)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHTTTC------EEEEEC
T ss_pred CCCCCEEEEECCChHHHHHHHHHHHHCCC------eEEEEe
Confidence 46689999999997 69999999999997 888886
No 497
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=80.05 E-value=1.2 Score=47.70 Aligned_cols=33 Identities=27% Similarity=0.409 Sum_probs=29.4
Q ss_pred CcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCCc
Q 002073 576 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDV 614 (972)
Q Consensus 576 ~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D~ 614 (972)
.||.|||+|.+|+.++++|+..|. +++++|.+.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~------~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGC------SVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC------EEEEECSSG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCC------eEEEEcCCH
Confidence 589999999999999999999997 888887653
No 498
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=80.00 E-value=1 Score=52.44 Aligned_cols=35 Identities=17% Similarity=0.346 Sum_probs=31.9
Q ss_pred HhcCcEEEEcCCcchHHHHHHHHHccccCCCCceEEEEcCC
Q 002073 573 LEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 613 (972)
Q Consensus 573 L~~~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~iiD~D 613 (972)
|..++++|+|+|+||..+++.|+..|. +++++|.|
T Consensus 263 L~GKtVvVtGaGgIG~aiA~~Laa~GA------~Viv~D~~ 297 (488)
T 3ond_A 263 IAGKVAVVAGYGDVGKGCAAALKQAGA------RVIVTEID 297 (488)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC------EEEEECSC
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHCCC------EEEEEcCC
Confidence 678999999999999999999999998 88888764
No 499
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=79.99 E-value=3.4 Score=44.70 Aligned_cols=32 Identities=25% Similarity=0.467 Sum_probs=27.1
Q ss_pred CcEEEEcC-CcchHHHHHHHHHc--cccCCCCceEEEEcCC
Q 002073 576 AKVFIVGS-GALGCEFLKNVALM--GVSCGNQGKLTITDDD 613 (972)
Q Consensus 576 ~kVlIVGa-GgiG~e~lknLa~~--Gv~~~~~g~i~iiD~D 613 (972)
++|+|.|+ |.||..+++.|+.. |. +++++|..
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~~g~------~V~~~~r~ 39 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNHPDV------HVTVLDKL 39 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTTC------EEEEEECC
T ss_pred cEEEEeCCccHHHHHHHHHHHHhCCCC------EEEEEeCC
Confidence 57999995 99999999999998 54 78888754
No 500
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=79.96 E-value=4.2 Score=42.97 Aligned_cols=82 Identities=15% Similarity=0.188 Sum_probs=51.7
Q ss_pred CcEEEEcCCcchHHHHHHHHHccccCCCCceEE-EEcCCcccccCCCcccccccCcccccHHHHHHHHHHhhCCCcEEEE
Q 002073 576 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLT-ITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEA 654 (972)
Q Consensus 576 ~kVlIVGaGgiG~e~lknLa~~Gv~~~~~g~i~-iiD~D~Ie~SNLnRQfLf~~~dVGk~Ks~vaa~~l~~inP~~~I~~ 654 (972)
.||.|+|||.+|..+++.+...+ +.|+ ++|.+.-+ ..++
T Consensus 4 mkI~ViGaGrMG~~i~~~l~~~~------~eLva~~d~~~~~------------------------------~~gv---- 43 (243)
T 3qy9_A 4 MKILLIGYGAMNQRVARLAEEKG------HEIVGVIENTPKA------------------------------TTPY---- 43 (243)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT------CEEEEEECSSCC--------------------------------CCS----
T ss_pred eEEEEECcCHHHHHHHHHHHhCC------CEEEEEEecCccc------------------------------cCCC----
Confidence 58999999999999999988754 2443 35543210 0111
Q ss_pred eecccCCCcccccchhccCCCcEEEEccCChHHHHHHhhhhhccccceEecccCCc
Q 002073 655 LQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLESGTLGA 710 (972)
Q Consensus 655 ~~~~v~~~~e~i~~~~f~~~~DvVi~alDn~~aR~~v~~~c~~~~kPli~sgt~G~ 710 (972)
.+..+. +++. ..|+||+.+..-.+...+. ...++|++ .||.|+
T Consensus 44 ---~v~~dl-----~~l~-~~DVvIDft~p~a~~~~~~---l~~g~~vV-igTTG~ 86 (243)
T 3qy9_A 44 ---QQYQHI-----ADVK-GADVAIDFSNPNLLFPLLD---EDFHLPLV-VATTGE 86 (243)
T ss_dssp ---CBCSCT-----TTCT-TCSEEEECSCHHHHHHHHT---SCCCCCEE-ECCCSS
T ss_pred ---ceeCCH-----HHHh-CCCEEEEeCChHHHHHHHH---HhcCCceE-eCCCCC
Confidence 111111 1234 8999999885545555553 78899998 467675
Done!