BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 002074
         (972 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|255580622|ref|XP_002531134.1| alanyl-tRNA synthetase, putative [Ricinus communis]
 gi|223529283|gb|EEF31254.1| alanyl-tRNA synthetase, putative [Ricinus communis]
          Length = 1025

 Score = 1647 bits (4264), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 786/958 (82%), Positives = 851/958 (88%), Gaps = 30/958 (3%)

Query: 45   VAAMPGADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKP 104
            +AAMPG DPQ +EWPA KVRDTF  FFEDK HV+WKSSPVVPVNDPTLLFANAGMNQ+KP
Sbjct: 68   IAAMPGVDPQEMEWPAKKVRDTFISFFEDKKHVHWKSSPVVPVNDPTLLFANAGMNQFKP 127

Query: 105  IFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK 164
            IFLGTADPNT LSKL+RACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK
Sbjct: 128  IFLGTADPNTALSKLSRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK 187

Query: 165  NEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCK 224
             EAI WAWELLTK+Y+LPADR+YATYFGGDEKAGLAPD EARD WL+FLP  RVLPFGCK
Sbjct: 188  REAIGWAWELLTKIYKLPADRIYATYFGGDEKAGLAPDAEARDFWLQFLPPERVLPFGCK 247

Query: 225  DNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKP 284
            DNFWEMGDTGPCGPC+EIHYDR GNRDA+ LVNNDDPTCIEIWN+VFIQFNRESDGSLKP
Sbjct: 248  DNFWEMGDTGPCGPCTEIHYDRVGNRDASQLVNNDDPTCIEIWNLVFIQFNRESDGSLKP 307

Query: 285  LPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVD 344
            LPAKHVDTG+GFERLTS+LQNKMSNYDTDVF+PIFDAIQQATGARPYSGKVG+DD D+VD
Sbjct: 308  LPAKHVDTGMGFERLTSVLQNKMSNYDTDVFLPIFDAIQQATGARPYSGKVGSDDVDRVD 367

Query: 345  MAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNI 404
            MAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQ+GFFNGLVNI
Sbjct: 368  MAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQEGFFNGLVNI 427

Query: 405  VVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFI 464
            VVKVMGDVFPEL Q E  IREII  EEASFGKTLLKGIEKFKKAAQ+VQGKV   QDAF+
Sbjct: 428  VVKVMGDVFPELIQNEVRIREIIKEEEASFGKTLLKGIEKFKKAAQEVQGKVSCLQDAFV 487

Query: 465  LWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAA 524
            LWDTYGFPLDLTQLMAEERGL VD+EGFNNAMDEARERSR+AQNKQAGG I+MDADAT+A
Sbjct: 488  LWDTYGFPLDLTQLMAEERGLWVDVEGFNNAMDEARERSRNAQNKQAGGDIIMDADATSA 547

Query: 525  LHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
            LHK+GV  TDDS+KFIWFQDH+SVIKAIYTG+EF+ S    NEVGIVL S+SFYAEQGGQ
Sbjct: 548  LHKKGVSVTDDSYKFIWFQDHESVIKAIYTGTEFLGSTTSSNEVGIVLESTSFYAEQGGQ 607

Query: 585  IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
            IFD G +EG FGSF V NVQI+GGFV+HIGSLT  A R SVG++VICKVDYDRR LIAPN
Sbjct: 608  IFDTGSLEGTFGSFQVSNVQIFGGFVVHIGSLTRAAPRLSVGDKVICKVDYDRRTLIAPN 667

Query: 645  HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
            HTCTHMLNFALREVLG+HVDQKGS+VLPEKLRFDFSHGKPVDP  LR+IESIVNEQIKAE
Sbjct: 668  HTCTHMLNFALREVLGNHVDQKGSIVLPEKLRFDFSHGKPVDPALLRKIESIVNEQIKAE 727

Query: 705  LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
            L+V +KEATL+EAK INGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEW SISAELC
Sbjct: 728  LEVSAKEATLSEAKRINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWSSISAELC 787

Query: 765  GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGS 824
            GGTH+SNT+EA+AFALLSEEGIAKG+RRITAVTT  A+KA E A  LE+E D+ SK EGS
Sbjct: 788  GGTHISNTKEAKAFALLSEEGIAKGVRRITAVTTDGAFKAMELASLLEQEADEISKTEGS 847

Query: 825  LLEK------------------------------NQVRKAQKKVAEENLQKAVKVATETA 854
            LLEK                              ++VRKAQKK++EEN+QKAVK+ATE A
Sbjct: 848  LLEKKVASLKSRVDSAPIPAAKKFDIRTKISALQDEVRKAQKKISEENMQKAVKIATEMA 907

Query: 855  EAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEK 914
            E AAS GK FCISRV+VGLDAAAVREAV KV+++KG+  MVFS DETTNK VVCAGV EK
Sbjct: 908  EVAASEGKQFCISRVDVGLDAAAVREAVSKVLQKKGLSAMVFSIDETTNKVVVCAGVAEK 967

Query: 915  SDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKLR 972
             D+SKQLEVSEWLTAAL+PL GRCGKGKGGLA+GQGT+   +  AM+LAAEFA MKLR
Sbjct: 968  GDKSKQLEVSEWLTAALKPLNGRCGKGKGGLATGQGTEGVHLDAAMNLAAEFAQMKLR 1025


>gi|225423779|ref|XP_002277341.1| PREDICTED: alanyl-tRNA synthetase-like [Vitis vinifera]
          Length = 1002

 Score = 1629 bits (4219), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 793/968 (81%), Positives = 859/968 (88%), Gaps = 30/968 (3%)

Query: 35   SLISRFSASAVAAMPGADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLF 94
            S  +  S +AV  M       VEWPA KVRDTF  FFE KNHV+WKSSPVVPVNDPTLLF
Sbjct: 35   SFFTYSSEAAVIGMAQKAVSEVEWPANKVRDTFINFFESKNHVDWKSSPVVPVNDPTLLF 94

Query: 95   ANAGMNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEML 154
            ANAGMNQ+KPIFLGTADPNT LSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEML
Sbjct: 95   ANAGMNQFKPIFLGTADPNTALSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEML 154

Query: 155  GNWSFGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLP 214
            GNWSFGDYFK EAIEWAWELLTKVY+LP DR+YATYFGGDEK+GL+PD EARD+WLKFLP
Sbjct: 155  GNWSFGDYFKKEAIEWAWELLTKVYKLPTDRIYATYFGGDEKSGLSPDTEARDMWLKFLP 214

Query: 215  ASRVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQF 274
               VLPFGCKDNFWEMGDTGPCGPC+EIH+DR GNRDAASLVNNDDPTCIEIWN+VFIQF
Sbjct: 215  PGHVLPFGCKDNFWEMGDTGPCGPCTEIHFDRIGNRDAASLVNNDDPTCIEIWNLVFIQF 274

Query: 275  NRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGK 334
            NRESDGSLK LPAKHVDTG+GFERLTSILQ KMSNYDTDVF+PIFDAIQQATGARPYSGK
Sbjct: 275  NRESDGSLKSLPAKHVDTGMGFERLTSILQGKMSNYDTDVFLPIFDAIQQATGARPYSGK 334

Query: 335  VGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQ 394
            VG+DDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQ
Sbjct: 335  VGSDDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQ 394

Query: 395  DGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG 454
            +GFFN  VNIVVKVMGDVFPELKQRE HIREIIA EEASFGKTLLKGIEKFKKAAQ+VQG
Sbjct: 395  EGFFNSFVNIVVKVMGDVFPELKQREVHIREIIAEEEASFGKTLLKGIEKFKKAAQEVQG 454

Query: 455  KVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA 514
            K+L+GQDAF+LWDTYGFPLDLTQLMAEERGL+VD++GFN A+DEARERSRSAQNKQAGG 
Sbjct: 455  KILNGQDAFVLWDTYGFPLDLTQLMAEERGLIVDVQGFNAALDEARERSRSAQNKQAGGT 514

Query: 515  IVMDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLAS 574
            IVMDADAT+ALHKRGV  TDDSFKF WFQDH SVIKAIY+GSEF+ES   GNEVGIVL +
Sbjct: 515  IVMDADATSALHKRGVAPTDDSFKFTWFQDHGSVIKAIYSGSEFLESASAGNEVGIVLET 574

Query: 575  SSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVD 634
            +SFYAEQGGQIFD G +EG  GSF V NVQIYGGF++HIGS TE +GRFSVG++VICKVD
Sbjct: 575  TSFYAEQGGQIFDTGSLEGTSGSFQVCNVQIYGGFILHIGSFTEASGRFSVGDKVICKVD 634

Query: 635  YDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIE 694
            YDRRK+IAPNHTCTHMLNFALREVLG+HVDQKGS+VLPEKLRFDFSHGKPV P+HLR+IE
Sbjct: 635  YDRRKVIAPNHTCTHMLNFALREVLGNHVDQKGSIVLPEKLRFDFSHGKPVHPDHLRKIE 694

Query: 695  SIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENK 754
            SIVNEQI AELDVFSK+A+LA+AK INGLRAVFGEVYPDPVRVV+IG+KVEDLLADP N+
Sbjct: 695  SIVNEQIDAELDVFSKDASLADAKSINGLRAVFGEVYPDPVRVVSIGQKVEDLLADPGNE 754

Query: 755  EWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKE 814
            +WLSISAELCGGTH+SNTREA+AFALLSEEGIAKGIRRITAVTT +A+KA E A SLE+E
Sbjct: 755  KWLSISAELCGGTHISNTREAKAFALLSEEGIAKGIRRITAVTTDVAFKAIELARSLEQE 814

Query: 815  VDDASKIEGSLLEK------------------------------NQVRKAQKKVAEENLQ 844
            VDDASK EG  LEK                              +QVRKAQKK AEEN+Q
Sbjct: 815  VDDASKTEGISLEKKVASLRSRVDSAPIPAARKADLRAKISLLQDQVRKAQKKFAEENIQ 874

Query: 845  KAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNK 904
            KAVK AT+ A+ AAS+GK FCIS V+VGLD  AVREAVLKVIEQKG+ VM+FSTDETTNK
Sbjct: 875  KAVKAATDMAQLAASDGKTFCISHVDVGLDTTAVREAVLKVIEQKGISVMIFSTDETTNK 934

Query: 905  AVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAA 964
            AVV AGVP+K D++KQLEVSEWLTAAL PLKGRCGKGKGGLA GQGTDA+ V  AMD+A 
Sbjct: 935  AVVYAGVPQKGDKAKQLEVSEWLTAALGPLKGRCGKGKGGLAQGQGTDASHVKEAMDVAE 994

Query: 965  EFAAMKLR 972
             FA+MKLR
Sbjct: 995  NFASMKLR 1002


>gi|449461691|ref|XP_004148575.1| PREDICTED: alanine--tRNA ligase-like [Cucumis sativus]
          Length = 956

 Score = 1607 bits (4160), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 774/954 (81%), Positives = 848/954 (88%), Gaps = 30/954 (3%)

Query: 48  MPGADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFL 107
           MPGA  Q VEWPA ++RDTFF+FFE+KNHV W SSPVVPVNDPTLLFANAGMNQ+KPIFL
Sbjct: 1   MPGAGSQGVEWPADRIRDTFFRFFEEKNHVYWNSSPVVPVNDPTLLFANAGMNQFKPIFL 60

Query: 108 GTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEA 167
           GT DPNT LSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK EA
Sbjct: 61  GTVDPNTSLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEA 120

Query: 168 IEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNF 227
           I WAWELLT+VY+LP DR+YATYFGGDEKAGLAPD EARD+WL FLPA RVLPFGCKDNF
Sbjct: 121 ITWAWELLTQVYKLPKDRIYATYFGGDEKAGLAPDTEARDMWLNFLPAERVLPFGCKDNF 180

Query: 228 WEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
           WEMGDTGPCGPC+EIHYDR G RDAA LVNNDDPTCIEIWN+VFIQFNRE+DGSLKPLPA
Sbjct: 181 WEMGDTGPCGPCTEIHYDRLGGRDAAQLVNNDDPTCIEIWNLVFIQFNRENDGSLKPLPA 240

Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
           KHVDTGLGFERLTS+LQNKMSNYDTDVFMPIFDAIQ+ATGARPYSGKVG DD D +DMAY
Sbjct: 241 KHVDTGLGFERLTSVLQNKMSNYDTDVFMPIFDAIQKATGARPYSGKVGPDDVDNMDMAY 300

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQ+GFFNGLV+IVVK
Sbjct: 301 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQEGFFNGLVSIVVK 360

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWD 467
           VMGDVFPELKQ E  IREIIA EEASFGKTLLKGIEKFKKAAQDVQGK+LSGQDAFILWD
Sbjct: 361 VMGDVFPELKQHEVRIREIIAEEEASFGKTLLKGIEKFKKAAQDVQGKILSGQDAFILWD 420

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
           TYGFPLDLTQLMAEERGLLVD +GFNNAMDEARERSRSAQNKQAGG I MDADATAAL K
Sbjct: 421 TYGFPLDLTQLMAEERGLLVDTQGFNNAMDEARERSRSAQNKQAGGTIAMDADATAALRK 480

Query: 528 RGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFD 587
           + + +TDD FKFIWF+DH+SV+KAIYTG EF+ESV  GNEVG+VL S+SFYAEQGGQIFD
Sbjct: 481 KAIASTDDKFKFIWFKDHESVVKAIYTGYEFLESVAAGNEVGLVLESTSFYAEQGGQIFD 540

Query: 588 EGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTC 647
            G +EG FGSF V NVQI+GGF++HIGS   G+ R S+G++VICKVDY+RRKL APNHTC
Sbjct: 541 TGIVEGSFGSFQVCNVQIFGGFIVHIGSFNGGSSRISLGDKVICKVDYERRKLTAPNHTC 600

Query: 648 THMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDV 707
           THMLNFALRE+LG+HVDQKGS+VLPEKLRFDFSHGKPVDP+ LR+IESIVN+QI+ ELDV
Sbjct: 601 THMLNFALREILGNHVDQKGSIVLPEKLRFDFSHGKPVDPDDLRKIESIVNKQIEDELDV 660

Query: 708 FSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGT 767
            ++E TLAEAK INGLRAVFGEVYPDPVRVVAIG+ V++LLADP+N+ WLSIS+ELCGGT
Sbjct: 661 NAQEVTLAEAKRINGLRAVFGEVYPDPVRVVAIGKNVDELLADPDNENWLSISSELCGGT 720

Query: 768 HLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLE 827
           H+SNTREA+AFALLSEEGIAKGIRRITAVTT  A+KA E A SLE+EVD A  I+G+LLE
Sbjct: 721 HISNTREAKAFALLSEEGIAKGIRRITAVTTDSAFKAIEQAQSLEQEVDAAFNIDGNLLE 780

Query: 828 K------------------------------NQVRKAQKKVAEENLQKAVKVATETAEAA 857
           K                              N+VRKAQKK+AEEN+QKAVK+A ETAE A
Sbjct: 781 KMVASFKNRVDSAPIPAARKAQIRTKIVLLQNEVRKAQKKLAEENMQKAVKIAVETAEMA 840

Query: 858 ASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQ 917
           +S GKPFCIS V+VGLDAAAVREAV++V+EQKG+  MVFSTDETT KAVVCAGVP K +Q
Sbjct: 841 SSEGKPFCISHVDVGLDAAAVREAVVRVMEQKGISTMVFSTDETTKKAVVCAGVPPKGNQ 900

Query: 918 SKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
            KQLEVSEWLT ALQPLKGRCGKGKGGLA+GQGTDA+Q+  AMDLA  FA++KL
Sbjct: 901 GKQLEVSEWLTTALQPLKGRCGKGKGGLATGQGTDASQIKEAMDLATSFASLKL 954


>gi|449508396|ref|XP_004163302.1| PREDICTED: LOW QUALITY PROTEIN: alanine--tRNA ligase-like [Cucumis
           sativus]
          Length = 956

 Score = 1604 bits (4153), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 772/954 (80%), Positives = 847/954 (88%), Gaps = 30/954 (3%)

Query: 48  MPGADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFL 107
           MPGA  Q VEWPA ++RDTFF+FFE+KNHV W SSPVVPVNDPTLLFANAGMNQ+KPIFL
Sbjct: 1   MPGAGSQGVEWPADRIRDTFFRFFEEKNHVYWNSSPVVPVNDPTLLFANAGMNQFKPIFL 60

Query: 108 GTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEA 167
           GT DPNT LSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK EA
Sbjct: 61  GTVDPNTSLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEA 120

Query: 168 IEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNF 227
           I WAWELLT+VY+LP DR+YATYFGGDEKAGLAPD EARD+WL FLPA RVLPFGCKDNF
Sbjct: 121 ITWAWELLTQVYKLPKDRIYATYFGGDEKAGLAPDTEARDMWLNFLPAERVLPFGCKDNF 180

Query: 228 WEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
           WEMGDTGPCGPC+EIHYDR G RDAA LVNNDDPTCIEIWN+VFIQFNRE+DGSLKPLPA
Sbjct: 181 WEMGDTGPCGPCTEIHYDRLGGRDAAQLVNNDDPTCIEIWNLVFIQFNRENDGSLKPLPA 240

Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
           KHVDTGLGFERLTS+LQNKMSNYDTDVFMPIFDAIQ+ATGARPYSGKVG DD D +DMAY
Sbjct: 241 KHVDTGLGFERLTSVLQNKMSNYDTDVFMPIFDAIQKATGARPYSGKVGPDDVDSMDMAY 300

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RVVADHIRTLSFAIADGSCPGNEGREYVLR ILRRA+RYGSEVLKAQ+GFFNGLV+IVVK
Sbjct: 301 RVVADHIRTLSFAIADGSCPGNEGREYVLRXILRRAIRYGSEVLKAQEGFFNGLVSIVVK 360

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWD 467
           VMGDVFPELKQ E  IREIIA EEASFGKTLLKGIEKFKKAAQDVQGK+LSGQDAFILWD
Sbjct: 361 VMGDVFPELKQHEVRIREIIAEEEASFGKTLLKGIEKFKKAAQDVQGKILSGQDAFILWD 420

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
           TYGFPLDLTQLMAEERGLLVD +GFNNAMDEARERSRSAQNKQAGG I MDADATAAL K
Sbjct: 421 TYGFPLDLTQLMAEERGLLVDTQGFNNAMDEARERSRSAQNKQAGGTIAMDADATAALRK 480

Query: 528 RGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFD 587
           + + +TDD FKFIWF+DH+SV+KAIYTG EF+ESV  GNEVG+VL S+SFYAEQGGQIFD
Sbjct: 481 KAIASTDDKFKFIWFKDHESVVKAIYTGYEFLESVAAGNEVGLVLESTSFYAEQGGQIFD 540

Query: 588 EGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTC 647
            G +EG FGSF V NVQI+GGF++HIGS   G+ R S+G++VICKVDY+RRKL APNHTC
Sbjct: 541 TGIVEGSFGSFQVCNVQIFGGFIVHIGSFNGGSSRISLGDKVICKVDYERRKLTAPNHTC 600

Query: 648 THMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDV 707
           THMLNFALRE+LG+HVDQKGS+VLPEKLRFDFSHGKPVDP+ LR+IESIVN+QI+ ELDV
Sbjct: 601 THMLNFALREILGNHVDQKGSIVLPEKLRFDFSHGKPVDPDDLRKIESIVNKQIEDELDV 660

Query: 708 FSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGT 767
            ++E TLAEAK INGLRAVFGEVYPDPVRVVAIG+ V++LLADP+N+ WLSIS+ELCGGT
Sbjct: 661 NAQEVTLAEAKRINGLRAVFGEVYPDPVRVVAIGKNVDELLADPDNENWLSISSELCGGT 720

Query: 768 HLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLE 827
           H+SNTREA+AFALLSEEGIAKGIRRITAVTT  A+KA E A SLE+EVD A  I+G+LLE
Sbjct: 721 HISNTREAKAFALLSEEGIAKGIRRITAVTTDSAFKAIEQAQSLEQEVDAAFNIDGNLLE 780

Query: 828 K------------------------------NQVRKAQKKVAEENLQKAVKVATETAEAA 857
           K                              N+VRKAQKK+AEEN+QKAVK+A ETAE A
Sbjct: 781 KMVASFKNRVDSAPIPAARKAQIRTKIVLLQNEVRKAQKKLAEENMQKAVKIAVETAEMA 840

Query: 858 ASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQ 917
           +S GKPFCIS V+VGLDAAAVREAV++V+EQKG+  MVFSTDETT KAVVCAGVP K +Q
Sbjct: 841 SSEGKPFCISHVDVGLDAAAVREAVVRVMEQKGISTMVFSTDETTKKAVVCAGVPPKGNQ 900

Query: 918 SKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
            KQLEVSEWLT ALQPLKGRCGKGKGGLA+GQGTDA+Q+  AMDLA  FA++KL
Sbjct: 901 GKQLEVSEWLTTALQPLKGRCGKGKGGLATGQGTDASQIKEAMDLATSFASLKL 954


>gi|297737260|emb|CBI26461.3| unnamed protein product [Vitis vinifera]
          Length = 960

 Score = 1581 bits (4093), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 780/959 (81%), Positives = 839/959 (87%), Gaps = 35/959 (3%)

Query: 48  MPGADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFL 107
           MP   P V EWPA KVRDTF  FFE K HVNW SSPVVP+NDPTLLFANAGMNQ+KPIFL
Sbjct: 1   MPELPPTVTEWPAAKVRDTFISFFEAKEHVNWVSSPVVPLNDPTLLFANAGMNQFKPIFL 60

Query: 108 GTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEA 167
           GTADPNT LSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK EA
Sbjct: 61  GTADPNTPLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKREA 120

Query: 168 IEWAWELLT-----KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFG 222
           IEWAWELLT     KVY+LP DR YATYFGGDE+ GLAPD+EARDIWLKFLP   VLPFG
Sbjct: 121 IEWAWELLTEAICNKVYKLPTDRFYATYFGGDEQLGLAPDDEARDIWLKFLPPGHVLPFG 180

Query: 223 CKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSL 282
           CKDNFWEMGDTGPCGPC+EIH+DR GNRDA SLVNNDDPTCIEIWN+VFIQFNRESDGSL
Sbjct: 181 CKDNFWEMGDTGPCGPCTEIHFDRIGNRDATSLVNNDDPTCIEIWNLVFIQFNRESDGSL 240

Query: 283 KPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADK 342
           KPLPAKHVDTG+GFERLTSILQNKMSNYDTDVF+PIFDAI  ATGA  YSGKVG +D DK
Sbjct: 241 KPLPAKHVDTGMGFERLTSILQNKMSNYDTDVFLPIFDAIHLATGAPLYSGKVGTEDVDK 300

Query: 343 VDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLV 402
           VDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQ+GFFNGLV
Sbjct: 301 VDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQEGFFNGLV 360

Query: 403 NIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDA 462
            +VVKVMGDVFPELKQ E HIR IIAAEEASFGKTL+KGIEKFKKAAQ+VQGK+LSGQ+A
Sbjct: 361 GVVVKVMGDVFPELKQHEMHIRGIIAAEEASFGKTLIKGIEKFKKAAQEVQGKILSGQEA 420

Query: 463 FILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADAT 522
           F+LWDTYGFPLDLTQLMAEERGL VD+ GFN AMDEARERSR+AQNK+AGGAIVMDADAT
Sbjct: 421 FVLWDTYGFPLDLTQLMAEERGLTVDVMGFNIAMDEARERSRNAQNKKAGGAIVMDADAT 480

Query: 523 AALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQG 582
           AALHK GV ATDD  KF WF+DH+SVIKAIYTG EF+ES   G+EVGI+L ++SFYAEQG
Sbjct: 481 AALHKMGVAATDDISKFTWFEDHESVIKAIYTGIEFLESAAAGDEVGIILETTSFYAEQG 540

Query: 583 GQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIA 642
           GQIFD G +EG  GSF V NVQIYGGFV+HIGS+T   GRFSVG++VICKVDYDRRKLIA
Sbjct: 541 GQIFDTGSLEGSCGSFQVCNVQIYGGFVLHIGSVTGEIGRFSVGDKVICKVDYDRRKLIA 600

Query: 643 PNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIK 702
           PNHTCTHMLNFALREVLG+HVDQKGS+VLPEKLRFDFSHGKP+ P+HLRRIESIVN+QIK
Sbjct: 601 PNHTCTHMLNFALREVLGNHVDQKGSIVLPEKLRFDFSHGKPIHPDHLRRIESIVNDQIK 660

Query: 703 AELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAE 762
            ELDV+ KEATLA+AK INGLRAVFGEVYPDPVRVV IGRKVEDLLADP+N EWLS+SAE
Sbjct: 661 DELDVYGKEATLADAKRINGLRAVFGEVYPDPVRVVTIGRKVEDLLADPDNAEWLSVSAE 720

Query: 763 LCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIE 822
           LCGGTH+SNTREA+AFALLSEEGIAKGIRRITAVTT  A+KA E A SLE+EVD AS  E
Sbjct: 721 LCGGTHISNTREAKAFALLSEEGIAKGIRRITAVTTDSAFKAMELAFSLEQEVDAASDAE 780

Query: 823 GSLLEK------------------------------NQVRKAQKKVAEENLQKAVKVATE 852
           GSLLEK                              +QVRK QKK+AEEN+QKAVKVATE
Sbjct: 781 GSLLEKKVASLRSRVDAAPIPAPKKADLRTKISLLQDQVRKEQKKIAEENIQKAVKVATE 840

Query: 853 TAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVP 912
            A+ AAS+GK FCIS V+VGLD  AVREAVLKVIEQKG+ VMVFSTDETTNKAVV AGVP
Sbjct: 841 MADGAASDGKAFCISLVDVGLDTTAVREAVLKVIEQKGISVMVFSTDETTNKAVVYAGVP 900

Query: 913 EKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           E  ++ KQLEVSEWLTAAL PLKGRCGKGKGGLA GQGTDA+ V  AMD+A +FA+MKL
Sbjct: 901 ENGEKFKQLEVSEWLTAALGPLKGRCGKGKGGLAQGQGTDASLVKEAMDVATKFASMKL 959


>gi|30694735|ref|NP_175439.2| Alanyl-tRNA synthetase [Arabidopsis thaliana]
 gi|21542451|sp|P36428.3|SYA_ARATH RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
            synthetase; Short=AlaRS; Flags: Precursor
 gi|332194403|gb|AEE32524.1| Alanyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 1003

 Score = 1535 bits (3974), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 750/957 (78%), Positives = 834/957 (87%), Gaps = 30/957 (3%)

Query: 45   VAAMPGADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKP 104
            VA MPG++P   +WPA +VRDT+  FF  K H  W SSPVVP NDPTLLFANAGMNQYKP
Sbjct: 46   VAVMPGSEPSETQWPAKRVRDTYVDFFRGKGHKFWPSSPVVPHNDPTLLFANAGMNQYKP 105

Query: 105  IFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK 164
            IFLGTADPNT+LSKL+RACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK
Sbjct: 106  IFLGTADPNTELSKLSRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK 165

Query: 165  NEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCK 224
             EAIEWAWELLTKVY LP DR+YATYFGGDEKAGL PDNEARDIWLK LP+ RVLPFGCK
Sbjct: 166  KEAIEWAWELLTKVYGLPTDRIYATYFGGDEKAGLQPDNEARDIWLKVLPSGRVLPFGCK 225

Query: 225  DNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKP 284
            DNFWEMGDTGPCGPC+EIHYDR GNRDAASLVNNDDPTC+EIWN+VFIQFNRESDGSLKP
Sbjct: 226  DNFWEMGDTGPCGPCTEIHYDRIGNRDAASLVNNDDPTCLEIWNLVFIQFNRESDGSLKP 285

Query: 285  LPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVD 344
            LPAKHVDTG+GFERLTS+LQNKMSNYDTDVFMPIFD IQ+ATGARPYSGKVG +D D+VD
Sbjct: 286  LPAKHVDTGMGFERLTSVLQNKMSNYDTDVFMPIFDDIQKATGARPYSGKVGPEDVDRVD 345

Query: 345  MAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNI 404
            MAYRVVADHIRTLSFAIADGS PGNEGREYVLRRILRRAVRYG E+LKA++GFFNGLV+ 
Sbjct: 346  MAYRVVADHIRTLSFAIADGSRPGNEGREYVLRRILRRAVRYGKEILKAEEGFFNGLVSS 405

Query: 405  VVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFI 464
            V++VMGDVF ELK+ E  I +II  EEASF KTL KGIEKF+KA Q VQG  LSG DAFI
Sbjct: 406  VIRVMGDVFTELKEHEKKITDIIKEEEASFCKTLAKGIEKFRKAGQAVQGNTLSGDDAFI 465

Query: 465  LWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAA 524
            LWDTYGFPLDLTQLMAEERGLLVD++GFN AM+EARERSRSAQNKQAGGAIVMDADAT+ 
Sbjct: 466  LWDTYGFPLDLTQLMAEERGLLVDVDGFNKAMEEARERSRSAQNKQAGGAIVMDADATST 525

Query: 525  LHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
            LHK GV ATDDSFK+IWFQDH+S +KAIYTGS F+ES    + VG+VL S+SFYAEQGGQ
Sbjct: 526  LHKAGVSATDDSFKYIWFQDHESELKAIYTGSTFLESSAASDNVGLVLGSTSFYAEQGGQ 585

Query: 585  IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
            IFD G IEG FG+F V NVQI+GGFV+HIG L++  G  SVG++VICKVDY+RRKLIAPN
Sbjct: 586  IFDTGLIEGSFGTFNVCNVQIFGGFVLHIGYLSKETGEVSVGDKVICKVDYERRKLIAPN 645

Query: 645  HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
            HTCTHMLN+AL+EVLGDH+DQKGS+VLPEKLRFDFSHGKPVDPE LRRIESIVN+QIK E
Sbjct: 646  HTCTHMLNYALKEVLGDHIDQKGSIVLPEKLRFDFSHGKPVDPEDLRRIESIVNKQIKDE 705

Query: 705  LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
            LDVFSKEA L+EAK I GLRAVFGEVYPDPVRVV+IGRKVEDLLADPEN EW  +S+E C
Sbjct: 706  LDVFSKEAVLSEAKRIKGLRAVFGEVYPDPVRVVSIGRKVEDLLADPENNEWSLLSSEFC 765

Query: 765  GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGS 824
            GGTH++NTREA+AFALLSEEGIAKGIRR+TAVTT  A+ A  AA  LE+EV+DAS+ EGS
Sbjct: 766  GGTHITNTREAKAFALLSEEGIAKGIRRVTAVTTECAFDALNAASLLEREVEDASRAEGS 825

Query: 825  LLEK------------------------------NQVRKAQKKVAEENLQKAVKVATETA 854
             LEK                              N+VRKAQKK+AE+NL+K+VK+ATE A
Sbjct: 826  ALEKKVSALKSRVDAAIIPAAKKADIRTKIASLQNEVRKAQKKIAEQNLKKSVKLATEAA 885

Query: 855  EAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEK 914
            E+AAS+GK FCI +++VGLDAAAVREAV KV+E+KGM +MVFSTDE+TNKAVVCAGVPEK
Sbjct: 886  ESAASDGKTFCIIQLDVGLDAAAVREAVSKVMEKKGMSIMVFSTDESTNKAVVCAGVPEK 945

Query: 915  SDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
            SDQ K L+V+EWLT AL PLKGRCGKGKGGLASGQGTDA+QV  A+D+A+ FA+MKL
Sbjct: 946  SDQFKPLDVTEWLTTALGPLKGRCGKGKGGLASGQGTDASQVQAALDMASSFASMKL 1002


>gi|297852712|ref|XP_002894237.1| cytosolic tRNA-Ala synthetase [Arabidopsis lyrata subsp. lyrata]
 gi|297340079|gb|EFH70496.1| cytosolic tRNA-Ala synthetase [Arabidopsis lyrata subsp. lyrata]
          Length = 955

 Score = 1531 bits (3963), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 749/954 (78%), Positives = 835/954 (87%), Gaps = 30/954 (3%)

Query: 48  MPGADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFL 107
           MPG++P   +WPA +VRDT+  FF+ K H  W SSPVVP NDPTLLFANAGMNQYKPIFL
Sbjct: 1   MPGSEPSETQWPARRVRDTYVDFFKGKGHKFWPSSPVVPHNDPTLLFANAGMNQYKPIFL 60

Query: 108 GTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEA 167
           GTADPNT+LSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK EA
Sbjct: 61  GTADPNTELSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEA 120

Query: 168 IEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNF 227
           IEWAWELLTKVY LP DR+YATYFGGDEKAGL PDNEARDIWL+FLP+ RVLPFGCKDNF
Sbjct: 121 IEWAWELLTKVYGLPTDRIYATYFGGDEKAGLQPDNEARDIWLQFLPSGRVLPFGCKDNF 180

Query: 228 WEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
           WEMGDTGPCGPC+EIHYDR GNRDAA LVNNDDPTC+EIWN+VFIQFNRESDGSLKPLPA
Sbjct: 181 WEMGDTGPCGPCTEIHYDRVGNRDAAYLVNNDDPTCLEIWNLVFIQFNRESDGSLKPLPA 240

Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
           KHVDTG+GFERLTS+LQNKMSNYDTDVFMPIFD IQ+ATGAR YSGKVG +D D+VDMAY
Sbjct: 241 KHVDTGMGFERLTSVLQNKMSNYDTDVFMPIFDDIQKATGARAYSGKVGPEDDDRVDMAY 300

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RVVADHIRTLSFAIADGS PGNEGREYVLRRILRRAVRYG ++LKA++GFFNGLV+ V++
Sbjct: 301 RVVADHIRTLSFAIADGSRPGNEGREYVLRRILRRAVRYGKQILKAEEGFFNGLVSSVIR 360

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWD 467
           VMGDVF ELK+ E  I EII  EEASF KTL+KGIEKF+KA Q VQG  LSG+DAF+LWD
Sbjct: 361 VMGDVFTELKEHEKKITEIIKEEEASFCKTLVKGIEKFQKAEQAVQGNTLSGEDAFVLWD 420

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
           TYGFPLDLTQLMAEER LLVD+EGFN AM+EARERSRSAQNKQAGGAIVMDADAT+ LHK
Sbjct: 421 TYGFPLDLTQLMAEERRLLVDVEGFNKAMEEARERSRSAQNKQAGGAIVMDADATSTLHK 480

Query: 528 RGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFD 587
            GV ATDDSFK+IWFQDH+S +KAIYTGS F+ES+   + VG+VL S+SFYAEQGGQIFD
Sbjct: 481 TGVSATDDSFKYIWFQDHESELKAIYTGSTFLESLAATDNVGLVLGSTSFYAEQGGQIFD 540

Query: 588 EGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTC 647
            G IEG FG+F V NVQI+GGFV+HIG L++ AG  SVG++VICKVDY+RRKLIAPNHTC
Sbjct: 541 TGLIEGSFGTFNVCNVQIFGGFVVHIGYLSKDAGEVSVGDKVICKVDYERRKLIAPNHTC 600

Query: 648 THMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDV 707
           THMLNFAL+EVLGDH+DQKGS+VLPEKLRFDFSHGKPVDPE LRRIESIVN+QIK ELDV
Sbjct: 601 THMLNFALKEVLGDHIDQKGSIVLPEKLRFDFSHGKPVDPEDLRRIESIVNKQIKDELDV 660

Query: 708 FSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGT 767
           FSKEA L+EAK I GLRAVFGEVYPDPVRVV+IGR+VEDLLADPEN EW  +S+E CGGT
Sbjct: 661 FSKEAVLSEAKRIKGLRAVFGEVYPDPVRVVSIGRQVEDLLADPENNEWSLLSSEFCGGT 720

Query: 768 HLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLE 827
           H++NTREA+AFALLSEEGIAKGIRR+TAVTT  A+ A  AA  LE+EV+DAS+ EGS LE
Sbjct: 721 HITNTREAKAFALLSEEGIAKGIRRVTAVTTECAFDALNAASLLEREVEDASRAEGSALE 780

Query: 828 K------------------------------NQVRKAQKKVAEENLQKAVKVATETAEAA 857
           K                              N+VRKAQKK+AE+NL+K+VKVATE AE+A
Sbjct: 781 KKVSALKSRVDAAIIPAAKKADIRAKIASLQNEVRKAQKKIAEQNLKKSVKVATEAAESA 840

Query: 858 ASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQ 917
           AS+GK FCI +++VGLDAAAVREAV KV+E+KGM +MVFSTDE+TNKAVVCAGVPEKSDQ
Sbjct: 841 ASDGKTFCIIQLDVGLDAAAVREAVSKVMEKKGMSIMVFSTDESTNKAVVCAGVPEKSDQ 900

Query: 918 SKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
            K L+V+EWLT AL PLKGRCGKGKGGLASGQGTDA+QV  A+D+AA FA+MKL
Sbjct: 901 FKPLDVTEWLTTALGPLKGRCGKGKGGLASGQGTDASQVQAALDMAASFASMKL 954


>gi|5734779|gb|AAD50044.1|AC007980_9 cytosolic tRNA-Ala synthetase [Arabidopsis thaliana]
 gi|27311841|gb|AAO00886.1| Unknown protein [Arabidopsis thaliana]
 gi|31711780|gb|AAP68246.1| At1g50200 [Arabidopsis thaliana]
          Length = 955

 Score = 1530 bits (3962), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 748/954 (78%), Positives = 832/954 (87%), Gaps = 30/954 (3%)

Query: 48  MPGADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFL 107
           MPG++P   +WPA +VRDT+  FF  K H  W SSPVVP NDPTLLFANAGMNQYKPIFL
Sbjct: 1   MPGSEPSETQWPAKRVRDTYVDFFRGKGHKFWPSSPVVPHNDPTLLFANAGMNQYKPIFL 60

Query: 108 GTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEA 167
           GTADPNT+LSKL+RACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK EA
Sbjct: 61  GTADPNTELSKLSRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEA 120

Query: 168 IEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNF 227
           IEWAWELLTKVY LP DR+YATYFGGDEKAGL PDNEARDIWLK LP+ RVLPFGCKDNF
Sbjct: 121 IEWAWELLTKVYGLPTDRIYATYFGGDEKAGLQPDNEARDIWLKVLPSGRVLPFGCKDNF 180

Query: 228 WEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
           WEMGDTGPCGPC+EIHYDR GNRDAASLVNNDDPTC+EIWN+VFIQFNRESDGSLKPLPA
Sbjct: 181 WEMGDTGPCGPCTEIHYDRIGNRDAASLVNNDDPTCLEIWNLVFIQFNRESDGSLKPLPA 240

Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
           KHVDTG+GFERLTS+LQNKMSNYDTDVFMPIFD IQ+ATGARPYSGKVG +D D+VDMAY
Sbjct: 241 KHVDTGMGFERLTSVLQNKMSNYDTDVFMPIFDDIQKATGARPYSGKVGPEDVDRVDMAY 300

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RVVADHIRTLSFAIADGS PGNEGREYVLRRILRRAVRYG E+LKA++GFFNGLV+ V++
Sbjct: 301 RVVADHIRTLSFAIADGSRPGNEGREYVLRRILRRAVRYGKEILKAEEGFFNGLVSSVIR 360

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWD 467
           VMGDVF ELK+ E  I +II  EEASF KTL KGIEKF+KA Q VQG  LSG DAFILWD
Sbjct: 361 VMGDVFTELKEHEKKITDIIKEEEASFCKTLAKGIEKFRKAGQAVQGNTLSGDDAFILWD 420

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
           TYGFPLDLTQLMAEERGLLVD++GFN AM+EARERSRSAQNKQAGGAIVMDADAT+ LHK
Sbjct: 421 TYGFPLDLTQLMAEERGLLVDVDGFNKAMEEARERSRSAQNKQAGGAIVMDADATSTLHK 480

Query: 528 RGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFD 587
            GV ATDDSFK+IWFQDH+S +KAIYTGS F+ES    + VG+VL S+SFYAEQGGQIFD
Sbjct: 481 AGVSATDDSFKYIWFQDHESELKAIYTGSTFLESSAASDNVGLVLGSTSFYAEQGGQIFD 540

Query: 588 EGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTC 647
            G IEG FG+F V NVQI+GGFV+HIG L++  G  SVG++VICKVDY+RRKLIAPNHTC
Sbjct: 541 TGLIEGSFGTFNVCNVQIFGGFVLHIGYLSKETGEVSVGDKVICKVDYERRKLIAPNHTC 600

Query: 648 THMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDV 707
           THMLN+AL+EVLGDH+DQKGS+VLPEKLRFDFSHGKPVDPE LRRIESIVN+QIK ELDV
Sbjct: 601 THMLNYALKEVLGDHIDQKGSIVLPEKLRFDFSHGKPVDPEDLRRIESIVNKQIKDELDV 660

Query: 708 FSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGT 767
           FSKEA L+EAK I GLRAVFGEVYPDPVRVV+IGRKVEDLLADPEN EW  +S+E CGGT
Sbjct: 661 FSKEAVLSEAKRIKGLRAVFGEVYPDPVRVVSIGRKVEDLLADPENNEWSLLSSEFCGGT 720

Query: 768 HLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLE 827
           H++NTREA+AFALLSEEGIAKGIRR+TAVTT  A+ A  AA  LE+EV+DAS+ EGS LE
Sbjct: 721 HITNTREAKAFALLSEEGIAKGIRRVTAVTTECAFDALNAASLLEREVEDASRAEGSALE 780

Query: 828 K------------------------------NQVRKAQKKVAEENLQKAVKVATETAEAA 857
           K                              N+VRKAQKK+AE+NL+K+VK+ATE AE+A
Sbjct: 781 KKVSALKSRVDAAIIPAAKKADIRTKIASLQNEVRKAQKKIAEQNLKKSVKLATEAAESA 840

Query: 858 ASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQ 917
           AS+GK FCI +++VGLDAAAVREAV KV+E+KGM +MVFSTDE+TNKAVVCAGVPEKSDQ
Sbjct: 841 ASDGKTFCIIQLDVGLDAAAVREAVSKVMEKKGMSIMVFSTDESTNKAVVCAGVPEKSDQ 900

Query: 918 SKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
            K L+V+EWLT AL PLKGRCGKGKGGLASGQGTDA+QV  A+D+A+ FA+MKL
Sbjct: 901 FKPLDVTEWLTTALGPLKGRCGKGKGGLASGQGTDASQVQAALDMASSFASMKL 954


>gi|334183197|ref|NP_001185186.1| Alanyl-tRNA synthetase [Arabidopsis thaliana]
 gi|332194404|gb|AEE32525.1| Alanyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 963

 Score = 1529 bits (3958), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 748/962 (77%), Positives = 832/962 (86%), Gaps = 38/962 (3%)

Query: 48  MPGADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFL 107
           MPG++P   +WPA +VRDT+  FF  K H  W SSPVVP NDPTLLFANAGMNQYKPIFL
Sbjct: 1   MPGSEPSETQWPAKRVRDTYVDFFRGKGHKFWPSSPVVPHNDPTLLFANAGMNQYKPIFL 60

Query: 108 GTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEA 167
           GTADPNT+LSKL+RACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK EA
Sbjct: 61  GTADPNTELSKLSRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEA 120

Query: 168 IEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNF 227
           IEWAWELLTKVY LP DR+YATYFGGDEKAGL PDNEARDIWLK LP+ RVLPFGCKDNF
Sbjct: 121 IEWAWELLTKVYGLPTDRIYATYFGGDEKAGLQPDNEARDIWLKVLPSGRVLPFGCKDNF 180

Query: 228 WEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
           WEMGDTGPCGPC+EIHYDR GNRDAASLVNNDDPTC+EIWN+VFIQFNRESDGSLKPLPA
Sbjct: 181 WEMGDTGPCGPCTEIHYDRIGNRDAASLVNNDDPTCLEIWNLVFIQFNRESDGSLKPLPA 240

Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
           KHVDTG+GFERLTS+LQNKMSNYDTDVFMPIFD IQ+ATGARPYSGKVG +D D+VDMAY
Sbjct: 241 KHVDTGMGFERLTSVLQNKMSNYDTDVFMPIFDDIQKATGARPYSGKVGPEDVDRVDMAY 300

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RVVADHIRTLSFAIADGS PGNEGREYVLRRILRRAVRYG E+LKA++GFFNGLV+ V++
Sbjct: 301 RVVADHIRTLSFAIADGSRPGNEGREYVLRRILRRAVRYGKEILKAEEGFFNGLVSSVIR 360

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWD 467
           VMGDVF ELK+ E  I +II  EEASF KTL KGIEKF+KA Q VQG  LSG DAFILWD
Sbjct: 361 VMGDVFTELKEHEKKITDIIKEEEASFCKTLAKGIEKFRKAGQAVQGNTLSGDDAFILWD 420

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
           TYGFPLDLTQLMAEERGLLVD++GFN AM+EARERSRSAQNKQAGGAIVMDADAT+ LHK
Sbjct: 421 TYGFPLDLTQLMAEERGLLVDVDGFNKAMEEARERSRSAQNKQAGGAIVMDADATSTLHK 480

Query: 528 RGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFD 587
            GV ATDDSFK+IWFQDH+S +KAIYTGS F+ES    + VG+VL S+SFYAEQGGQIFD
Sbjct: 481 AGVSATDDSFKYIWFQDHESELKAIYTGSTFLESSAASDNVGLVLGSTSFYAEQGGQIFD 540

Query: 588 EGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTC 647
            G IEG FG+F V NVQI+GGFV+HIG L++  G  SVG++VICKVDY+RRKLIAPNHTC
Sbjct: 541 TGLIEGSFGTFNVCNVQIFGGFVLHIGYLSKETGEVSVGDKVICKVDYERRKLIAPNHTC 600

Query: 648 THMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDV 707
           THMLN+AL+EVLGDH+DQKGS+VLPEKLRFDFSHGKPVDPE LRRIESIVN+QIK ELDV
Sbjct: 601 THMLNYALKEVLGDHIDQKGSIVLPEKLRFDFSHGKPVDPEDLRRIESIVNKQIKDELDV 660

Query: 708 FSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGT 767
           FSKEA L+EAK I GLRAVFGEVYPDPVRVV+IGRKVEDLLADPEN EW  +S+E CGGT
Sbjct: 661 FSKEAVLSEAKRIKGLRAVFGEVYPDPVRVVSIGRKVEDLLADPENNEWSLLSSEFCGGT 720

Query: 768 HLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLE 827
           H++NTREA+AFALLSEEGIAKGIRR+TAVTT  A+ A  AA  LE+EV+DAS+ EGS LE
Sbjct: 721 HITNTREAKAFALLSEEGIAKGIRRVTAVTTECAFDALNAASLLEREVEDASRAEGSALE 780

Query: 828 K--------------------------------------NQVRKAQKKVAEENLQKAVKV 849
           K                                      N+VRKAQKK+AE+NL+K+VK+
Sbjct: 781 KKVSALKSRVDAAIIPAAKKADIRTKIASLQVISSFSLTNEVRKAQKKIAEQNLKKSVKL 840

Query: 850 ATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCA 909
           ATE AE+AAS+GK FCI +++VGLDAAAVREAV KV+E+KGM +MVFSTDE+TNKAVVCA
Sbjct: 841 ATEAAESAASDGKTFCIIQLDVGLDAAAVREAVSKVMEKKGMSIMVFSTDESTNKAVVCA 900

Query: 910 GVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAM 969
           GVPEKSDQ K L+V+EWLT AL PLKGRCGKGKGGLASGQGTDA+QV  A+D+A+ FA+M
Sbjct: 901 GVPEKSDQFKPLDVTEWLTTALGPLKGRCGKGKGGLASGQGTDASQVQAALDMASSFASM 960

Query: 970 KL 971
           KL
Sbjct: 961 KL 962


>gi|1673365|emb|CAA80380.1| mitochondrial tRNA-Ala synthetase [Arabidopsis thaliana]
          Length = 1003

 Score = 1528 bits (3957), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 747/957 (78%), Positives = 832/957 (86%), Gaps = 30/957 (3%)

Query: 45   VAAMPGADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKP 104
            VA MPG++P   +WPA +VRDT+  FF  K H  W SSPVVP NDPTLLFANAGMNQYKP
Sbjct: 46   VAVMPGSEPSETQWPAKRVRDTYVDFFRGKGHKFWPSSPVVPHNDPTLLFANAGMNQYKP 105

Query: 105  IFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK 164
            IFLGTADPNT+LSKL+RACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK
Sbjct: 106  IFLGTADPNTELSKLSRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK 165

Query: 165  NEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCK 224
             EAIEWAWELLTKVY LP DR+YATYFG DEKAGL PDNEARDIWLK LP+ RVLPFGCK
Sbjct: 166  KEAIEWAWELLTKVYGLPTDRIYATYFGRDEKAGLQPDNEARDIWLKVLPSGRVLPFGCK 225

Query: 225  DNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKP 284
            DNFWEMGDTGPCGPC+EIHYDR GNRDAASLVNNDDPTC+EIWN+VFIQFNRESDGSLKP
Sbjct: 226  DNFWEMGDTGPCGPCTEIHYDRIGNRDAASLVNNDDPTCLEIWNLVFIQFNRESDGSLKP 285

Query: 285  LPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVD 344
            LPAKHVDTG+GFERLTS+LQNKMSNYDTDVFMPIFD IQ+ATGARPYSGKVG +D D+VD
Sbjct: 286  LPAKHVDTGMGFERLTSVLQNKMSNYDTDVFMPIFDDIQKATGARPYSGKVGPEDVDRVD 345

Query: 345  MAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNI 404
            MAYRVVADHIRTLSFAIADGS PGNEGREYVLRRILRRAVRYG E+LKA++GFFNGLV+ 
Sbjct: 346  MAYRVVADHIRTLSFAIADGSRPGNEGREYVLRRILRRAVRYGKEILKAEEGFFNGLVSS 405

Query: 405  VVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFI 464
            V++VMGDVF ELK+ E  I +II  EEASF KTL KGIEKF+KA Q VQG  LSG DAFI
Sbjct: 406  VIRVMGDVFTELKEHEKKITDIIKEEEASFCKTLAKGIEKFRKAGQAVQGNTLSGDDAFI 465

Query: 465  LWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAA 524
            LWDTYGFPLDLTQLMAEERGLLVD++GFN AM+EARERSRSAQNKQAGGAIVMDADAT+ 
Sbjct: 466  LWDTYGFPLDLTQLMAEERGLLVDVDGFNKAMEEARERSRSAQNKQAGGAIVMDADATST 525

Query: 525  LHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
            LHK GV ATDDSFK+IWFQDH+S +KAIYTGS F+ES    + VG+VL S+SFYAEQGGQ
Sbjct: 526  LHKAGVSATDDSFKYIWFQDHESELKAIYTGSTFLESSAASDNVGLVLGSTSFYAEQGGQ 585

Query: 585  IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
            IFD G IEG FG+F V NVQI+GGFV+HIG L++  G  SVG++VICKVDY+RRKLIAPN
Sbjct: 586  IFDTGLIEGSFGTFNVCNVQIFGGFVLHIGYLSKETGEVSVGDKVICKVDYERRKLIAPN 645

Query: 645  HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
            HTCTHMLN+AL+EVLGDH+DQKGS+VLPEKLRFDFSHGKPVDPE LRRIESIVN+QIK E
Sbjct: 646  HTCTHMLNYALKEVLGDHIDQKGSIVLPEKLRFDFSHGKPVDPEDLRRIESIVNKQIKDE 705

Query: 705  LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
            LDVFSKEA L+EAK I GLRAVFGE YPDPVRVV+IGRKVEDLLADPEN EW  +S+E C
Sbjct: 706  LDVFSKEAVLSEAKRIKGLRAVFGEAYPDPVRVVSIGRKVEDLLADPENNEWSLLSSEFC 765

Query: 765  GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGS 824
            GGTH++NTREA+AFALLSEEGIAKGIRR+TAVTT  A+ A  AA  LE+EV+DAS+ EGS
Sbjct: 766  GGTHITNTREAKAFALLSEEGIAKGIRRVTAVTTECAFDALNAASLLEREVEDASRAEGS 825

Query: 825  LLEK------------------------------NQVRKAQKKVAEENLQKAVKVATETA 854
             LEK                              N+VRKAQKK+AE+NL+K+VK+ATE A
Sbjct: 826  ALEKKVSALKSRVDAAIIPAAKKADIRTKIASLQNEVRKAQKKIAEQNLKKSVKLATEAA 885

Query: 855  EAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEK 914
            E+AAS+GK FCI +++VGLDAAAV+EAV KV+E+KGM +MVFSTDE+TNKAVVCAGVPEK
Sbjct: 886  ESAASDGKTFCIIQLDVGLDAAAVQEAVSKVMEKKGMSIMVFSTDESTNKAVVCAGVPEK 945

Query: 915  SDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
            SDQ K L+V+EWLT AL PLKGRCGKGKGGLASGQGTDA+QV  A+D+A+ FA+MKL
Sbjct: 946  SDQFKPLDVTEWLTTALGPLKGRCGKGKGGLASGQGTDASQVQAALDMASSFASMKL 1002


>gi|421855|pir||S32671 alanine-tRNA ligase (EC 6.1.1.7) - Arabidopsis thaliana  (fragment)
          Length = 989

 Score = 1526 bits (3950), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 747/957 (78%), Positives = 832/957 (86%), Gaps = 30/957 (3%)

Query: 45  VAAMPGADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKP 104
           VA MPG++P   +WPA +VRDT+  FF  K H  W SSPVVP NDPTLLFANAGMNQYKP
Sbjct: 32  VAVMPGSEPSETQWPAKRVRDTYVDFFRGKGHKFWPSSPVVPHNDPTLLFANAGMNQYKP 91

Query: 105 IFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK 164
           IFLGTADPNT+LSKL+RACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK
Sbjct: 92  IFLGTADPNTELSKLSRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK 151

Query: 165 NEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCK 224
            EAIEWAWELLTKVY LP DR+YATYFG DEKAGL PDNEARDIWLK LP+ RVLPFGCK
Sbjct: 152 KEAIEWAWELLTKVYGLPTDRIYATYFGRDEKAGLQPDNEARDIWLKVLPSGRVLPFGCK 211

Query: 225 DNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKP 284
           DNFWEMGDTGPCGPC+EIHYDR GNRDAASLVNNDDPTC+EIWN+VFIQFNRESDGSLKP
Sbjct: 212 DNFWEMGDTGPCGPCTEIHYDRIGNRDAASLVNNDDPTCLEIWNLVFIQFNRESDGSLKP 271

Query: 285 LPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVD 344
           LPAKHVDTG+GFERLTS+LQNKMSNYDTDVFMPIFD IQ+ATGARPYSGKVG +D D+VD
Sbjct: 272 LPAKHVDTGMGFERLTSVLQNKMSNYDTDVFMPIFDDIQKATGARPYSGKVGPEDVDRVD 331

Query: 345 MAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNI 404
           MAYRVVADHIRTLSFAIADGS PGNEGREYVLRRILRRAVRYG E+LKA++GFFNGLV+ 
Sbjct: 332 MAYRVVADHIRTLSFAIADGSRPGNEGREYVLRRILRRAVRYGKEILKAEEGFFNGLVSS 391

Query: 405 VVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFI 464
           V++VMGDVF ELK+ E  I +II  EEASF KTL KGIEKF+KA Q VQG  LSG DAFI
Sbjct: 392 VIRVMGDVFTELKEHEKKITDIIKEEEASFCKTLAKGIEKFRKAGQAVQGNTLSGDDAFI 451

Query: 465 LWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAA 524
           LWDTYGFPLDLTQLMAEERGLLVD++GFN AM+EARERSRSAQNKQAGGAIVMDADAT+ 
Sbjct: 452 LWDTYGFPLDLTQLMAEERGLLVDVDGFNKAMEEARERSRSAQNKQAGGAIVMDADATST 511

Query: 525 LHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
           LHK GV ATDDSFK+IWFQDH+S +KAIYTGS F+ES    + VG+VL S+SFYAEQGGQ
Sbjct: 512 LHKAGVSATDDSFKYIWFQDHESELKAIYTGSTFLESSAASDNVGLVLGSTSFYAEQGGQ 571

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           IFD G IEG FG+F V NVQI+GGFV+HIG L++  G  SVG++VICKVDY+RRKLIAPN
Sbjct: 572 IFDTGLIEGSFGTFNVCNVQIFGGFVLHIGYLSKETGEVSVGDKVICKVDYERRKLIAPN 631

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           HTCTHMLN+AL+EVLGDH+DQKGS+VLPEKLRFDFSHGKPVDPE LRRIESIVN+QIK E
Sbjct: 632 HTCTHMLNYALKEVLGDHIDQKGSIVLPEKLRFDFSHGKPVDPEDLRRIESIVNKQIKDE 691

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
           LDVFSKEA L+EAK I GLRAVFGE YPDPVRVV+IGRKVEDLLADPEN EW  +S+E C
Sbjct: 692 LDVFSKEAVLSEAKRIKGLRAVFGEAYPDPVRVVSIGRKVEDLLADPENNEWSLLSSEFC 751

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGS 824
           GGTH++NTREA+AFALLSEEGIAKGIRR+TAVTT  A+ A  AA  LE+EV+DAS+ EGS
Sbjct: 752 GGTHITNTREAKAFALLSEEGIAKGIRRVTAVTTECAFDALNAASLLEREVEDASRAEGS 811

Query: 825 LLEK------------------------------NQVRKAQKKVAEENLQKAVKVATETA 854
            LEK                              N+VRKAQKK+AE+NL+K+VK+ATE A
Sbjct: 812 ALEKKVSALKSRVDAAIIPAAKKADIRTKIASLQNEVRKAQKKIAEQNLKKSVKLATEAA 871

Query: 855 EAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEK 914
           E+AAS+GK FCI +++VGLDAAAV+EAV KV+E+KGM +MVFSTDE+TNKAVVCAGVPEK
Sbjct: 872 ESAASDGKTFCIIQLDVGLDAAAVQEAVSKVMEKKGMSIMVFSTDESTNKAVVCAGVPEK 931

Query: 915 SDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           SDQ K L+V+EWLT AL PLKGRCGKGKGGLASGQGTDA+QV  A+D+A+ FA+MKL
Sbjct: 932 SDQFKPLDVTEWLTTALGPLKGRCGKGKGGLASGQGTDASQVQAALDMASSFASMKL 988


>gi|1673366|emb|CAA80381.1| cytosolic tRNA-Ala synthetase [Arabidopsis thaliana]
          Length = 955

 Score = 1523 bits (3944), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 745/954 (78%), Positives = 830/954 (87%), Gaps = 30/954 (3%)

Query: 48  MPGADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFL 107
           MPG++P   +WPA +VRDT+  FF  K H  W SSPVVP NDPTLLFANAGMNQYKPIFL
Sbjct: 1   MPGSEPSETQWPAKRVRDTYVDFFRGKGHKFWPSSPVVPHNDPTLLFANAGMNQYKPIFL 60

Query: 108 GTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEA 167
           GTADPNT+LSKL+RACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK EA
Sbjct: 61  GTADPNTELSKLSRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEA 120

Query: 168 IEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNF 227
           IEWAWELLTKVY LP DR+YATYFG DEKAGL PDNEARDIWLK LP+ RVLPFGCKDNF
Sbjct: 121 IEWAWELLTKVYGLPTDRIYATYFGRDEKAGLQPDNEARDIWLKVLPSGRVLPFGCKDNF 180

Query: 228 WEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
           WEMGDTGPCGPC+EIHYDR GNRDAASLVNNDDPTC+EIWN+VFIQFNRESDGSLKPLPA
Sbjct: 181 WEMGDTGPCGPCTEIHYDRIGNRDAASLVNNDDPTCLEIWNLVFIQFNRESDGSLKPLPA 240

Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
           KHVDTG+GFERLTS+LQNKMSNYDTDVFMPIFD IQ+ATGARPYSGKVG +D D+VDMAY
Sbjct: 241 KHVDTGMGFERLTSVLQNKMSNYDTDVFMPIFDDIQKATGARPYSGKVGPEDVDRVDMAY 300

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RVVADHIRTLSFAIADGS PGNEGREYVLRRILRRAVRYG E+LKA++GFFNGLV+ V++
Sbjct: 301 RVVADHIRTLSFAIADGSRPGNEGREYVLRRILRRAVRYGKEILKAEEGFFNGLVSSVIR 360

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWD 467
           VMGDVF ELK+ E  I +II  EEASF KTL KGIEKF+KA Q VQG  LSG DAFILWD
Sbjct: 361 VMGDVFTELKEHEKKITDIIKEEEASFCKTLAKGIEKFRKAGQAVQGNTLSGDDAFILWD 420

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
           TYGFPLDLTQLMAEERGLLVD++GFN AM+EARERSRSAQNKQAGGAIVMDADAT+ LHK
Sbjct: 421 TYGFPLDLTQLMAEERGLLVDVDGFNKAMEEARERSRSAQNKQAGGAIVMDADATSTLHK 480

Query: 528 RGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFD 587
            GV ATDDSFK+IWFQDH+S +KAIYTGS F+ES    + VG+VL S+SFYAEQGGQIFD
Sbjct: 481 AGVSATDDSFKYIWFQDHESELKAIYTGSTFLESSAASDNVGLVLGSTSFYAEQGGQIFD 540

Query: 588 EGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTC 647
            G IEG FG+F V NVQI+GGFV+HIG L++  G  SVG++VICKVDY+RRKLIAPNHTC
Sbjct: 541 TGLIEGSFGTFNVCNVQIFGGFVLHIGYLSKETGEVSVGDKVICKVDYERRKLIAPNHTC 600

Query: 648 THMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDV 707
           THMLN+AL+EVLGDH+DQKGS+VLPEKLRFDFSHGKPVDPE LRRIESIVN+QIK ELDV
Sbjct: 601 THMLNYALKEVLGDHIDQKGSIVLPEKLRFDFSHGKPVDPEDLRRIESIVNKQIKDELDV 660

Query: 708 FSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGT 767
           FSKEA L+EAK I GLRAVFGE YPDPVRVV+IGRKVEDLLADPEN EW  +S+E CGGT
Sbjct: 661 FSKEAVLSEAKRIKGLRAVFGEAYPDPVRVVSIGRKVEDLLADPENNEWSLLSSEFCGGT 720

Query: 768 HLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLE 827
           H++NTREA+AFALLSEEGIAKGIRR+TAVTT  A+ A  AA  LE+EV+DAS+ EGS LE
Sbjct: 721 HITNTREAKAFALLSEEGIAKGIRRVTAVTTECAFDALNAASLLEREVEDASRAEGSALE 780

Query: 828 K------------------------------NQVRKAQKKVAEENLQKAVKVATETAEAA 857
           K                              N+VRKAQKK+AE+NL+K+VK+ATE AE+A
Sbjct: 781 KKVSALKSRVDAAIIPAAKKADIRTKIASLQNEVRKAQKKIAEQNLKKSVKLATEAAESA 840

Query: 858 ASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQ 917
           AS+GK FCI +++VGLDAAAV+EAV KV+E+KGM +MVFSTDE+TNKAVVCAGVPEKSDQ
Sbjct: 841 ASDGKTFCIIQLDVGLDAAAVQEAVSKVMEKKGMSIMVFSTDESTNKAVVCAGVPEKSDQ 900

Query: 918 SKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
            K L+V+EWLT AL PLKGRCGKGKGGLASGQGTDA+QV  A+D+A+ FA+MKL
Sbjct: 901 FKPLDVTEWLTTALGPLKGRCGKGKGGLASGQGTDASQVQAALDMASSFASMKL 954


>gi|356538581|ref|XP_003537781.1| PREDICTED: alanyl-tRNA synthetase-like [Glycine max]
          Length = 950

 Score = 1506 bits (3898), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 733/954 (76%), Positives = 836/954 (87%), Gaps = 35/954 (3%)

Query: 48  MPGADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFL 107
           MP  +   VEWPA +VRDTF  FF+DKNHVNWKSSPVVP NDPTLLFANAGMNQ+KPIFL
Sbjct: 1   MPETETHDVEWPAKRVRDTFISFFQDKNHVNWKSSPVVPFNDPTLLFANAGMNQFKPIFL 60

Query: 108 GTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEA 167
           GTADPNT LSKL+RACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK EA
Sbjct: 61  GTADPNTALSKLSRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKVEA 120

Query: 168 IEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNF 227
           I WAWELLTKVY+LP+DR+YATYFGGD+K+GLAPD EARDIWLKFLP  RVLPF CKDNF
Sbjct: 121 ISWAWELLTKVYKLPSDRIYATYFGGDDKSGLAPDLEARDIWLKFLPPGRVLPFDCKDNF 180

Query: 228 WEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
           WEMGDTGPCGPC+EIH+DR GNRDAASLVNNDDPTCIEIWN+VFIQFNRE+DGSLKPLPA
Sbjct: 181 WEMGDTGPCGPCTEIHFDRIGNRDAASLVNNDDPTCIEIWNLVFIQFNREADGSLKPLPA 240

Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
           KHVDTG+GFERLTSILQ+KMSNYDTDVF+PIFD IQ+ATGARPYSGKVG DDADKVDMAY
Sbjct: 241 KHVDTGMGFERLTSILQDKMSNYDTDVFLPIFDVIQRATGARPYSGKVGPDDADKVDMAY 300

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RVVADHIRTLSFAIADGS PGN+GREYVLRRILRRAVRYG EVLKA++GFFNGLV++VV 
Sbjct: 301 RVVADHIRTLSFAIADGSRPGNDGREYVLRRILRRAVRYGREVLKAKEGFFNGLVSVVVN 360

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWD 467
           VMGDVFPELKQ+E HIR II  EE SFG+TL+KGIEKF+ A + VQG +LSG++AF+LWD
Sbjct: 361 VMGDVFPELKQQETHIRNIIEEEEESFGRTLIKGIEKFEAAVRQVQGNILSGEEAFVLWD 420

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
           TYGFPLDLTQLMAEE+GL+VD++GF++AM+ ARERSRSAQ KQAGGAIVMDADAT+ALHK
Sbjct: 421 TYGFPLDLTQLMAEEKGLVVDVKGFDSAMEAARERSRSAQTKQAGGAIVMDADATSALHK 480

Query: 528 RGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFD 587
           RG++ T+DSFK+ WF+DH+SV+KAIYTGSEF+++V  G+++G+VL S+SFYAEQGGQIFD
Sbjct: 481 RGIVPTNDSFKYAWFKDHESVVKAIYTGSEFVDTVNTGDDIGVVLESTSFYAEQGGQIFD 540

Query: 588 EGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTC 647
            G +EG    F VRNVQ+YGGFV+HIG+   G G  SVG++V+CKVDY RR LIAPNHTC
Sbjct: 541 TGSLEGPHALFEVRNVQVYGGFVLHIGN---GTG-VSVGDKVVCKVDYGRRALIAPNHTC 596

Query: 648 THMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDV 707
           THMLNFALREVLGDHVDQKGS+VL EKLRFDFSHGKP++ ++LRRIESIVNEQIKAELDV
Sbjct: 597 THMLNFALREVLGDHVDQKGSIVLAEKLRFDFSHGKPIEADNLRRIESIVNEQIKAELDV 656

Query: 708 FSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGT 767
            +KEATLAEAK INGLRAVFGEVYPDPVRVV+IG+KVEDLLADP+N++WLSIS+ELCGGT
Sbjct: 657 SAKEATLAEAKGINGLRAVFGEVYPDPVRVVSIGQKVEDLLADPKNEKWLSISSELCGGT 716

Query: 768 HLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLE 827
           H+SNTREA+AFALLSEEGIAKGIRRITAVTT  AY A + A   E++VDDA+K+ G+LLE
Sbjct: 717 HISNTREAKAFALLSEEGIAKGIRRITAVTTDRAYDAMKVADEFEQQVDDAAKLVGTLLE 776

Query: 828 ------------------------------KNQVRKAQKKVAEENLQKAVKVATETAEAA 857
                                         ++QVRKAQK+VAEEN +KAV +  E AE A
Sbjct: 777 EKVSSLKSNIETLSIPAAKKADIKIKIVRLQDQVRKAQKQVAEENKRKAVMITAEKAELA 836

Query: 858 ASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQ 917
           ASNGK FCIS V+VGLD AAVREAV KV++QKG+ VMVFSTDE+TNKAVVCAGVPEK  +
Sbjct: 837 ASNGKTFCISLVDVGLDVAAVREAVTKVMDQKGLSVMVFSTDESTNKAVVCAGVPEKGGK 896

Query: 918 SKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
              L+V++WL+ AL PLKGRCGKGKGGLA+GQGT+A+ V  A+DLA +FA+MKL
Sbjct: 897 G-NLDVADWLSNALGPLKGRCGKGKGGLATGQGTEASHVNEAIDLAEKFASMKL 949


>gi|357473865|ref|XP_003607217.1| Alanyl-tRNA synthetase [Medicago truncatula]
 gi|355508272|gb|AES89414.1| Alanyl-tRNA synthetase [Medicago truncatula]
          Length = 950

 Score = 1494 bits (3868), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 729/954 (76%), Positives = 820/954 (85%), Gaps = 35/954 (3%)

Query: 48  MPGADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFL 107
           M G D   +EWPA +VRDTF KFFE+KNHV WKSSPVVPVNDPTLLFANAGMNQYKPIFL
Sbjct: 1   MTGTDTLDIEWPANRVRDTFVKFFEEKNHVYWKSSPVVPVNDPTLLFANAGMNQYKPIFL 60

Query: 108 GTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEA 167
           GT DPNT LSKL+RACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK EA
Sbjct: 61  GTVDPNTALSKLSRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKEEA 120

Query: 168 IEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNF 227
           I WAWELLTKVY+LP+DR+YATYFGGDEKAGLAPD EARDIWLKFLP  RVLPFGCKDNF
Sbjct: 121 ISWAWELLTKVYKLPSDRIYATYFGGDEKAGLAPDTEARDIWLKFLPPGRVLPFGCKDNF 180

Query: 228 WEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
           WEMGDTGPCGPC+EIH+DR GNRDAASLVNNDDPTCIEIWN+VFIQFNRE+D SLK LPA
Sbjct: 181 WEMGDTGPCGPCTEIHFDRIGNRDAASLVNNDDPTCIEIWNLVFIQFNREADSSLKSLPA 240

Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
           KHVDTG+GFERLTSILQ K+SNYDTDVFMPIFDAIQ ATGARPYSGKVG +DADK+DMAY
Sbjct: 241 KHVDTGMGFERLTSILQRKLSNYDTDVFMPIFDAIQLATGARPYSGKVGPEDADKIDMAY 300

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RVVADHIRTLSFAIADGS PGNEGREYVLRRILRRAVRYG EVLKA++GFFNGLVN+V  
Sbjct: 301 RVVADHIRTLSFAIADGSRPGNEGREYVLRRILRRAVRYGREVLKAEEGFFNGLVNVVAN 360

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWD 467
           V+GDVFPELKQ+E HIR +I  EE SFG+TL+KGI KFK A   VQG +LSG+ AF LWD
Sbjct: 361 VLGDVFPELKQQEVHIRNVIQEEEESFGRTLVKGIAKFKTAVGHVQGNILSGEVAFELWD 420

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
           TYGFPLDLTQLMAEE+ L VD+EGFN+AM+ ARERSR+AQNKQAGGAIVMDADAT+AL K
Sbjct: 421 TYGFPLDLTQLMAEEKKLKVDVEGFNSAMEAARERSRTAQNKQAGGAIVMDADATSALQK 480

Query: 528 RGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFD 587
           R ++ TDDSFKF  F+DH++V+KAIYTGSEF++SV    +VG++L S+SFYAEQGGQIFD
Sbjct: 481 RSIVPTDDSFKFASFRDHETVVKAIYTGSEFVDSVNTDGDVGVILESTSFYAEQGGQIFD 540

Query: 588 EGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTC 647
            G ++    SF V NVQ+YGGFV+HIG+   G G  SVG++V+CKVDY RR LIAPNHTC
Sbjct: 541 TGSLDFHHASFQVHNVQVYGGFVLHIGN---GTG-ISVGDKVVCKVDYGRRALIAPNHTC 596

Query: 648 THMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDV 707
           THMLNFALREVLG+HVDQKGS+VLPEKLRFDFSHGKPVD + LRRIESIVNEQI+AELDV
Sbjct: 597 THMLNFALREVLGNHVDQKGSIVLPEKLRFDFSHGKPVDADSLRRIESIVNEQIQAELDV 656

Query: 708 FSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGT 767
            +KE TLA+AK I GLRAVFGEVYPDPVRVV++G+KVEDLLADP+N++WLSIS+ELCGGT
Sbjct: 657 NAKEVTLADAKRIKGLRAVFGEVYPDPVRVVSVGQKVEDLLADPDNEKWLSISSELCGGT 716

Query: 768 HLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLE 827
           H+SNTREA+AFALL+EEGIAKGIRRITAVTT  A  A + A + EK+VD+ +K+EGSLLE
Sbjct: 717 HISNTREAKAFALLAEEGIAKGIRRITAVTTDRASDAMKMADNFEKQVDEVAKLEGSLLE 776

Query: 828 ------------------------------KNQVRKAQKKVAEENLQKAVKVATETAEAA 857
                                         ++QVRKAQK+VAEEN +KAV +  E A+ A
Sbjct: 777 EKVSSLKSNVETLSIPAAKKAEIKTKIALLQDQVRKAQKRVAEENKRKAVTITAEKADLA 836

Query: 858 ASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQ 917
            S+GK FCIS V VGLD AAVREAV KVI+QKG+ VMVFSTDE+TNKAVVCAGVPEK D+
Sbjct: 837 VSDGKSFCISHVNVGLDVAAVREAVTKVIDQKGLSVMVFSTDESTNKAVVCAGVPEKGDK 896

Query: 918 SKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
            K L+VSEWL+ AL PLKGRCGKGKGGLA+GQGTDA+ V  AMDLA +FA++KL
Sbjct: 897 GK-LDVSEWLSNALGPLKGRCGKGKGGLATGQGTDASHVNEAMDLAVKFASVKL 949


>gi|224083946|ref|XP_002307181.1| predicted protein [Populus trichocarpa]
 gi|222856630|gb|EEE94177.1| predicted protein [Populus trichocarpa]
          Length = 973

 Score = 1469 bits (3802), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 713/883 (80%), Positives = 779/883 (88%), Gaps = 33/883 (3%)

Query: 37  ISRFSASAVAAMPGADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFAN 96
           ++RF ++    +    P V +WPA +VRDTF KFFE+KNHV+WKSSPVVPVNDPTLLFAN
Sbjct: 44  LARFFSTMSGGIDSPQPDV-DWPANRVRDTFIKFFEEKNHVDWKSSPVVPVNDPTLLFAN 102

Query: 97  AGMNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGN 156
           AGMNQ+KPIFLGTADPNT LSKL+RACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGN
Sbjct: 103 AGMNQFKPIFLGTADPNTALSKLSRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGN 162

Query: 157 WSFGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPAS 216
           WSFGDYFK EAIEWAWELLTKVY+LPADR+YATYFGGDEKAGLAPDNEARDIWL+FLP  
Sbjct: 163 WSFGDYFKKEAIEWAWELLTKVYKLPADRIYATYFGGDEKAGLAPDNEARDIWLQFLPPG 222

Query: 217 RVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNR 276
           RVLPFGCKDNFWEMGDTGPCGPC+EIHYDR GNR+AA LVNNDDPTC+EIWN+VFIQFNR
Sbjct: 223 RVLPFGCKDNFWEMGDTGPCGPCTEIHYDRVGNRNAAMLVNNDDPTCLEIWNLVFIQFNR 282

Query: 277 ESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVG 336
           ESDGSLK LPAKHVDTG+GFERLTS+LQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVG
Sbjct: 283 ESDGSLKSLPAKHVDTGMGFERLTSVLQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVG 342

Query: 337 ADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG 396
           ADD D VDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQ+G
Sbjct: 343 ADDVDGVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQEG 402

Query: 397 FFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKV 456
           FFNGLVN+VVKVM DVFPELK+ E HIRE IAAEEASFGKTLLKGIEKFKKAAQ+V+GKV
Sbjct: 403 FFNGLVNVVVKVMSDVFPELKRNEEHIRETIAAEEASFGKTLLKGIEKFKKAAQEVEGKV 462

Query: 457 LSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIV 516
           LSGQ   +     G+     +  +EERGL VD+EGFNNAMDEARERSR+AQNKQAGGAIV
Sbjct: 463 LSGQARCVC--LVGYIWLPIRFDSEERGLRVDVEGFNNAMDEARERSRNAQNKQAGGAIV 520

Query: 517 MDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSS 576
           MDADAT+ALHK+GV ATDDSFKFI F+DH+SVIKAIY GSEF+ES    NEVGIVL S+S
Sbjct: 521 MDADATSALHKKGVSATDDSFKFICFEDHESVIKAIYNGSEFLESAAAANEVGIVLESTS 580

Query: 577 FYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYD 636
           FYAEQGGQIFD G +EG FGSF V NVQI+GGF++HIGSLT  +GRFSVGE+V CKVDYD
Sbjct: 581 FYAEQGGQIFDTGVLEGPFGSFQVCNVQIFGGFIVHIGSLTGVSGRFSVGEKVTCKVDYD 640

Query: 637 RRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESI 696
           RRKLIAPNHTCTHMLNFALREVLG+HVDQKGS+VLPEKLRFDFSHGKPVDPE LR+IESI
Sbjct: 641 RRKLIAPNHTCTHMLNFALREVLGNHVDQKGSIVLPEKLRFDFSHGKPVDPELLRKIESI 700

Query: 697 VNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEW 756
           VN QIK EL VF+KEATLAEAK INGLRAVFGEVYPDPVRVV+IGRKVEDLLA+PEN+EW
Sbjct: 701 VNGQIKDELGVFAKEATLAEAKQINGLRAVFGEVYPDPVRVVSIGRKVEDLLANPENEEW 760

Query: 757 LSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVD 816
           LSISAELCGGTH++NTREA+AFALLSEEGIAKGIRRITAVTT  A+KA E A SLE+EVD
Sbjct: 761 LSISAELCGGTHITNTREAKAFALLSEEGIAKGIRRITAVTTDGAFKAMELAHSLEQEVD 820

Query: 817 DASKIEGSLLEK------------------------------NQVRKAQKKVAEENLQKA 846
           +ASK +GSLLEK                              N+VRKAQKK+AEEN+QKA
Sbjct: 821 EASKADGSLLEKKVASLKTRVDSALIPAAKKADIRAKISVLQNKVRKAQKKIAEENMQKA 880

Query: 847 VKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQK 889
           V+VA E AE A+S+GK FCIS V+VGLDAAAVREAVLKV+E+K
Sbjct: 881 VEVAAEMAEVASSDGKAFCISHVDVGLDAAAVREAVLKVLERK 923


>gi|357497975|ref|XP_003619276.1| Alanyl-tRNA synthetase, partial [Medicago truncatula]
 gi|355494291|gb|AES75494.1| Alanyl-tRNA synthetase, partial [Medicago truncatula]
          Length = 900

 Score = 1440 bits (3727), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 691/905 (76%), Positives = 777/905 (85%), Gaps = 30/905 (3%)

Query: 48  MPGADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFL 107
           M G D   +EWPA +VRDTF KFFE+KNHV WKSSPVVPVNDPTLLFANAGMNQYKPIFL
Sbjct: 1   MTGTDTLDIEWPANRVRDTFVKFFEEKNHVYWKSSPVVPVNDPTLLFANAGMNQYKPIFL 60

Query: 108 GTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEA 167
           GT DPNT LSKL+RACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK EA
Sbjct: 61  GTVDPNTALSKLSRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKEEA 120

Query: 168 IEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNF 227
           I WAWELLTKVY+LP+DR+YATYFGGDEKAGLAPD EARDIWLKFLP  RVLPFGCKDNF
Sbjct: 121 ISWAWELLTKVYKLPSDRIYATYFGGDEKAGLAPDTEARDIWLKFLPPGRVLPFGCKDNF 180

Query: 228 WEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
           WEMGDTGPCGPC+EIH+DR GNRDAASLVNNDDPTCIEIWN+VFIQFNRE+D SLK LPA
Sbjct: 181 WEMGDTGPCGPCTEIHFDRIGNRDAASLVNNDDPTCIEIWNLVFIQFNREADSSLKSLPA 240

Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
           KHVDTG+GFERLTSILQ K+SNYDTDVFMPIFDAIQ ATGARPYSGKVG +DADK+DMAY
Sbjct: 241 KHVDTGMGFERLTSILQRKLSNYDTDVFMPIFDAIQLATGARPYSGKVGPEDADKIDMAY 300

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RVVADHIRTLSFAIADGS PGNEGREYVLRRILRRAVRYG EVLKA++GFFNGLVN+V  
Sbjct: 301 RVVADHIRTLSFAIADGSRPGNEGREYVLRRILRRAVRYGREVLKAEEGFFNGLVNVVAN 360

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWD 467
           V+GDVFPELKQ+E HIR +I  EE SFG+TL+KGI KFK A   VQG +LSG+ AF LWD
Sbjct: 361 VLGDVFPELKQQEVHIRNVIQEEEESFGRTLVKGIAKFKTAVGHVQGNILSGEVAFELWD 420

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
           TYGFPLDLTQLMAEE+ L VD+EGFN+AM+ ARERSR+AQNKQAGGAIVMDADAT+AL K
Sbjct: 421 TYGFPLDLTQLMAEEKKLKVDVEGFNSAMEAARERSRTAQNKQAGGAIVMDADATSALQK 480

Query: 528 RGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFD 587
           R ++ TDDSFKF  F+DH++V+KAIYTGSEF++SV    +VG++L S+SFYAEQGGQIFD
Sbjct: 481 RSIVPTDDSFKFASFRDHETVVKAIYTGSEFVDSVNTDGDVGVILESTSFYAEQGGQIFD 540

Query: 588 EGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTC 647
            G ++    SF V NVQ+YGGFV+HIG+   G G  SVG++V+CKVDY RR LIAPNHTC
Sbjct: 541 TGSLDFHHASFQVHNVQVYGGFVLHIGN---GTG-ISVGDKVVCKVDYGRRALIAPNHTC 596

Query: 648 THMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDV 707
           THMLNFALREVLG+HVDQKGS+VLPEKLRFDFSHGKPVD + LRRIESIVNEQI+AELDV
Sbjct: 597 THMLNFALREVLGNHVDQKGSIVLPEKLRFDFSHGKPVDADSLRRIESIVNEQIQAELDV 656

Query: 708 FSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGT 767
            +KE TLA+AK I GLRAVFGEVYPDPVRVV++G+KVEDLLADP+N++WLSIS+ELCGGT
Sbjct: 657 NAKEVTLADAKRIKGLRAVFGEVYPDPVRVVSVGQKVEDLLADPDNEKWLSISSELCGGT 716

Query: 768 HLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLE 827
           H+SNTREA+AFALL+EEGIAKGIRRITAVTT  A  A + A + EK+VD+ +K+EGSLLE
Sbjct: 717 HISNTREAKAFALLAEEGIAKGIRRITAVTTDRASDAMKMADNFEKQVDEVAKLEGSLLE 776

Query: 828 -----------------------KNQVRKAQKK--VAEENLQKAVKVATETAEAAASNGK 862
                                  K ++   Q+K  + EEN +KAV +  E A+ A S+GK
Sbjct: 777 EKVSSLKSNVETLSIPAAKKAEIKTKIALLQRKSVLLEENKRKAVTITAEKADLAVSDGK 836

Query: 863 PFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLE 922
            FCIS V VGLD AAVREAV KVI+QKG+ VMVFSTDE+TNKAVVCAGVPEK D+ K L+
Sbjct: 837 SFCISHVNVGLDVAAVREAVTKVIDQKGLSVMVFSTDESTNKAVVCAGVPEKGDKGK-LD 895

Query: 923 VSEWL 927
           VSEWL
Sbjct: 896 VSEWL 900


>gi|297737925|emb|CBI27126.3| unnamed protein product [Vitis vinifera]
          Length = 1026

 Score = 1433 bits (3710), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 728/1018 (71%), Positives = 806/1018 (79%), Gaps = 101/1018 (9%)

Query: 56   VEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQ 115
            VEWPA KVRDTF  FFE KNHV+WKSSPVVPVNDPTLLFANAGMNQ+KPIFLGTADPNT 
Sbjct: 9    VEWPANKVRDTFINFFESKNHVDWKSSPVVPVNDPTLLFANAGMNQFKPIFLGTADPNTA 68

Query: 116  LSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELL 175
            LSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK EAIEWAWELL
Sbjct: 69   LSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAIEWAWELL 128

Query: 176  TK----VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMG 231
            TK    VY+LP DR+YATYFGGDEK+GL+PD EARD+WLKFLP   VLPFGCKDNFWEMG
Sbjct: 129  TKAKNLVYKLPTDRIYATYFGGDEKSGLSPDTEARDMWLKFLPPGHVLPFGCKDNFWEMG 188

Query: 232  DTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVD 291
            DTGPCGPC+EIH+DR GNRDAASLVNNDDPTCIEIWN+VFIQFNRESDGSLK LPAKHVD
Sbjct: 189  DTGPCGPCTEIHFDRIGNRDAASLVNNDDPTCIEIWNLVFIQFNRESDGSLKSLPAKHVD 248

Query: 292  TGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVA 351
            TG+GFERLTSILQ KMSNYDTDVF+PIFDAIQQATGARPYSGKVG+DDADKVDMAYRVVA
Sbjct: 249  TGMGFERLTSILQGKMSNYDTDVFLPIFDAIQQATGARPYSGKVGSDDADKVDMAYRVVA 308

Query: 352  DHIRTLSFAIADGSCPGNEG---------------------------------------- 371
            DHIRTLSFAIADGSCPGNEG                                        
Sbjct: 309  DHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQEGFFNSFVNIVVKVMGD 368

Query: 372  -------REYVLRRIL-RRAVRYGSEVLKAQDGF-----------FNGLVNIVVKVMGDV 412
                   RE  +R I+      +G  +LK  + F            NG     ++V  + 
Sbjct: 369  VFPELKQREVHIREIIAEEEASFGKTLLKGIEKFKKAAQEVQGKILNGQEFYNIQVFTNF 428

Query: 413  FPELKQREAHIREIIAAEEASF---GKTLLKGIEKFKKAAQDVQ--GKVLSG---QDAFI 464
              + ++   H +EI      +F   G   +          QDV+   K++S    +DAF+
Sbjct: 429  IHDSQKCCNHFKEIFLWVGGAFWPSGSVEVVHFSDILMLFQDVEDGNKLVSLMIIKDAFV 488

Query: 465  LWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAA 524
            LWDTYGFPLDLTQLMAEERGL+VD++GFN A+DEARERSRSAQNKQAGG IVMDADAT+A
Sbjct: 489  LWDTYGFPLDLTQLMAEERGLIVDVQGFNAALDEARERSRSAQNKQAGGTIVMDADATSA 548

Query: 525  LHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
            LHKRGV  TDDSFKF WFQDH SVIKAIY+GSEF+ES   GNEVGIVL ++SFYAEQGGQ
Sbjct: 549  LHKRGVAPTDDSFKFTWFQDHGSVIKAIYSGSEFLESASAGNEVGIVLETTSFYAEQGGQ 608

Query: 585  IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
            IFD G +EG  GSF V NVQIYGGF++HIGS TE +GRFSVG++VICKVDYDRRK+IAPN
Sbjct: 609  IFDTGSLEGTSGSFQVCNVQIYGGFILHIGSFTEASGRFSVGDKVICKVDYDRRKVIAPN 668

Query: 645  HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
            HTCTHMLNFALREVLG+HVDQKGS+VLPEKLRFDFSHGKPV P+HLR+IESIVNEQI AE
Sbjct: 669  HTCTHMLNFALREVLGNHVDQKGSIVLPEKLRFDFSHGKPVHPDHLRKIESIVNEQIDAE 728

Query: 705  LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
            LDVFSK+A+LA+AK INGLRAVFGEVYPDPVRVV+IG+KVEDLLADP N++WLSISAELC
Sbjct: 729  LDVFSKDASLADAKSINGLRAVFGEVYPDPVRVVSIGQKVEDLLADPGNEKWLSISAELC 788

Query: 765  GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGS 824
            GGTH+SNTREA+AFALLSEEGIAKGIRRITAVTT +A+KA E A SLE+EVDDASK EG 
Sbjct: 789  GGTHISNTREAKAFALLSEEGIAKGIRRITAVTTDVAFKAIELARSLEQEVDDASKTEGI 848

Query: 825  LLEK------------------------------NQVRKAQKKVAEENLQKAVKVATETA 854
             LEK                              +QVRKAQKK AEEN+QKAVK AT+ A
Sbjct: 849  SLEKKVASLRSRVDSAPIPAARKADLRAKISLLQDQVRKAQKKFAEENIQKAVKAATDMA 908

Query: 855  EAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEK 914
            + AAS+GK FCIS V+VGLD  AVREAVLKVIEQKG+ VM+FSTDETTNKAVV AGVP+K
Sbjct: 909  QLAASDGKTFCISHVDVGLDTTAVREAVLKVIEQKGISVMIFSTDETTNKAVVYAGVPQK 968

Query: 915  SDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKLR 972
             D++KQLEVSEWLTAAL PLKGRCGKGKGGLA GQGTDA+ V  AMD+A  FA+MKLR
Sbjct: 969  GDKAKQLEVSEWLTAALGPLKGRCGKGKGGLAQGQGTDASHVKEAMDVAENFASMKLR 1026


>gi|242085328|ref|XP_002443089.1| hypothetical protein SORBIDRAFT_08g008230 [Sorghum bicolor]
 gi|241943782|gb|EES16927.1| hypothetical protein SORBIDRAFT_08g008230 [Sorghum bicolor]
          Length = 1006

 Score = 1349 bits (3492), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 647/950 (68%), Positives = 778/950 (81%), Gaps = 37/950 (3%)

Query: 57   EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
            EW A +VR+ +  FF  K H  W SSPVVPV+DPTLLFANAGMNQYKP+FLGTA P++ L
Sbjct: 58   EWTARRVREQYISFFVSKEHTRWPSSPVVPVDDPTLLFANAGMNQYKPVFLGTAAPDSPL 117

Query: 117  SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
             +L RACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK EAI WAWELLT
Sbjct: 118  GRLRRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKEEAIGWAWELLT 177

Query: 177  KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPC 236
            +VY+LP DR+YATYFGGDEK+GLA D E+++IWLK+LP  +VLPFG KDNFWEMGDTGPC
Sbjct: 178  QVYKLPTDRVYATYFGGDEKSGLAADVESKNIWLKYLPKEKVLPFGSKDNFWEMGDTGPC 237

Query: 237  GPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGF 296
            GPC+EIH+DR GNRDAASLVNNDDPTCIEIWN+VFIQFNRE+DGSL+PLPAKHVDTG+GF
Sbjct: 238  GPCTEIHFDRIGNRDAASLVNNDDPTCIEIWNLVFIQFNREADGSLRPLPAKHVDTGMGF 297

Query: 297  ERLTSILQNKMSNYDTDVFMPIFDAIQQ--ATGARPYSGKVGADDADKVDMAYRVVADHI 354
            ERLTSILQNKMSNYDTDVFMPIFDAI Q    G +PYSGKVG+DD  KVDMAYRVVADHI
Sbjct: 298  ERLTSILQNKMSNYDTDVFMPIFDAIHQLAGDGIQPYSGKVGSDDIGKVDMAYRVVADHI 357

Query: 355  RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
            RTLSFAIADGS PGNEGREYVLRRILRRAV +G + LKA+ GFF+ LVN+ V++MGDVFP
Sbjct: 358  RTLSFAIADGSQPGNEGREYVLRRILRRAVHFGHQKLKAKQGFFSSLVNVFVQLMGDVFP 417

Query: 415  ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ---GKVLSGQDAFILWDTYGF 471
            ELK  E  I++II  EE SF  TL KG EKFKKAA  V+   G VLSGQDAF+LWDTYG+
Sbjct: 418  ELKDNEKKIKDIIRDEEESFENTLAKGYEKFKKAADAVKDNGGTVLSGQDAFVLWDTYGY 477

Query: 472  PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
            P+DLT++MA + GL VD EGFN +M+EAR+++R+A+NK  G +I +DA+ATA L K+G+ 
Sbjct: 478  PIDLTEVMAIDYGLTVDKEGFNASMEEARQKARNARNKSGGKSIALDANATAHLRKQGLA 537

Query: 532  ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            +TDD+ KF+W ++H+SV+KAIYTGSE+I +     + G+VL S+SFYAEQGGQIFD G I
Sbjct: 538  STDDNPKFLWPKEHESVVKAIYTGSEYITTATGDEDFGLVLESTSFYAEQGGQIFDTGSI 597

Query: 592  EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHML 651
            EG FG+F V NVQ++ G+V+HIGS  +G+   S+G+ VICKVDY+RR LIAPNHTCTHML
Sbjct: 598  EGSFGTFNVNNVQVFAGYVLHIGSFAKGSKVLSLGDSVICKVDYNRRTLIAPNHTCTHML 657

Query: 652  NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKE 711
            NFALREVLGDHVDQKGS+VLPEKLRFDFSHGKPV PE LR+IESIVN+QIK EL V++ E
Sbjct: 658  NFALREVLGDHVDQKGSIVLPEKLRFDFSHGKPVQPEDLRKIESIVNQQIKDELGVYALE 717

Query: 712  ATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSN 771
              L +AK INGLRAVFGE+YPDPVRVV++GRKVEDLLADP++KEWLSIS ELCGGTH++N
Sbjct: 718  IKLEDAKRINGLRAVFGEIYPDPVRVVSVGRKVEDLLADPDSKEWLSISTELCGGTHITN 777

Query: 772  TREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEK--- 828
            TR+A+AFALLSEEGIAKG+RRITAVT G A +A E A S++ ++++AS++EG+LLEK   
Sbjct: 778  TRDAKAFALLSEEGIAKGVRRITAVTAGCATQAMELASSIDSDINEASQLEGALLEKKIA 837

Query: 829  ---------------------------NQVRKAQKKVAEENLQKAVKVATETAEAAASNG 861
                                       +++RKA+KK+ E+N+QKAVK A + AEAA S  
Sbjct: 838  SIKSGLDAAAIPAAKKADLRGKVSKLEDELRKAKKKMGEQNIQKAVKSAMDAAEAALSGN 897

Query: 862  KPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQL 921
            K FC++ V+VGLD  AVREAV+KV+++KG+P+M+FSTDE +NKAV+ AGVP  +      
Sbjct: 898  KLFCVTHVDVGLDTTAVREAVIKVMDKKGLPIMLFSTDEASNKAVIYAGVPPNAPNG--F 955

Query: 922  EVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
            +V +WLT ++ PLKGR G GK G+A GQG+DA+Q+  AM LA   A+MKL
Sbjct: 956  KVLDWLTPSIAPLKGRGGGGKNGIAQGQGSDASQLKEAMALANSIASMKL 1005


>gi|413916474|gb|AFW56406.1| hypothetical protein ZEAMMB73_266824 [Zea mays]
          Length = 1002

 Score = 1349 bits (3492), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 645/949 (67%), Positives = 774/949 (81%), Gaps = 37/949 (3%)

Query: 58   WPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLS 117
            WP+ ++R  F  FFE K H  W SSPVVPV+DPTLLFANAGMNQ+KP+FLGTA P++ L 
Sbjct: 55   WPSRRIRQEFLTFFESKAHTRWPSSPVVPVDDPTLLFANAGMNQFKPVFLGTAAPDSPLG 114

Query: 118  KLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTK 177
            +L RACNTQKCIRAGGKHNDLDDVG DTYHHTFFEMLGNWSFGDYFK EAI WAWELLT+
Sbjct: 115  RLHRACNTQKCIRAGGKHNDLDDVGNDTYHHTFFEMLGNWSFGDYFKEEAIRWAWELLTQ 174

Query: 178  VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCG 237
            VY+LP DR+YATYFGGD K+GL  D+E++DIWLK+LP  +VLPFGCKDNFWEMGDTGPCG
Sbjct: 175  VYKLPTDRIYATYFGGDVKSGLGADDESKDIWLKYLPKEKVLPFGCKDNFWEMGDTGPCG 234

Query: 238  PCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFE 297
            PC+EIH+DR GNRDAASLVNNDDPTCIEIWN+VFIQFNRE+DG+L+PLPAKHVDTGLGFE
Sbjct: 235  PCTEIHFDRIGNRDAASLVNNDDPTCIEIWNLVFIQFNREADGTLRPLPAKHVDTGLGFE 294

Query: 298  RLTSILQNKMSNYDTDVFMPIFDAIQQ--ATGARPYSGKVGADDADKVDMAYRVVADHIR 355
            RLTSILQNKMSNYDTD+FMPIFDAI Q    G +PYSGK+G+DD  KVDMAYRVVADHIR
Sbjct: 295  RLTSILQNKMSNYDTDIFMPIFDAIHQLAGDGIQPYSGKLGSDDIGKVDMAYRVVADHIR 354

Query: 356  TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPE 415
            TLSFAIADGS PGNEGREYVLRRILRRAV +G + LKA+  FF+ LVN+ V++MGDVFPE
Sbjct: 355  TLSFAIADGSQPGNEGREYVLRRILRRAVHFGHQKLKAKQSFFSSLVNVFVQLMGDVFPE 414

Query: 416  LKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ---GKVLSGQDAFILWDTYGFP 472
            LK  E  I+ II  EE SF  TL KG EKFKKAA  V+   G +LSGQDAFILWDTYG+P
Sbjct: 415  LKDNEKKIKCIIRDEEESFENTLAKGYEKFKKAADAVKDNGGTILSGQDAFILWDTYGYP 474

Query: 473  LDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLA 532
            +DLT++MA + GL VD +GFN +M+EAR+++R+A+NK  G +I MDA+ATA L K G+ +
Sbjct: 475  IDLTEVMAIDYGLTVDKKGFNASMEEARQKARNARNKSGGNSIAMDANATAQLRKLGLAS 534

Query: 533  TDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIE 592
            TDDS KF+W ++H+SV+KAIYTGSE+I +     + G+VL S+SFYAEQGGQIFD G IE
Sbjct: 535  TDDSPKFLWPKEHESVVKAIYTGSEYITTATGDGDFGLVLESTSFYAEQGGQIFDTGSIE 594

Query: 593  GLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLN 652
            G FG+F V NVQ++ G+V+HIGS T+G+   S+G+ VICKVDY+RR LIAPNHTCTHMLN
Sbjct: 595  GSFGTFNVNNVQVFAGYVLHIGSFTKGSKVLSLGDSVICKVDYNRRTLIAPNHTCTHMLN 654

Query: 653  FALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEA 712
            FALREVLGDHVDQKGS+VLPEKLRFDFSHGKPV PE LR+IE IVN+QIK EL V++ E 
Sbjct: 655  FALREVLGDHVDQKGSIVLPEKLRFDFSHGKPVQPEDLRKIEFIVNQQIKDELGVYALEI 714

Query: 713  TLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNT 772
             L +AK INGLRAVFGE+YPDPVRVV++GRKVEDLLADP++KEWLSIS ELCGGTH++NT
Sbjct: 715  KLEDAKRINGLRAVFGEIYPDPVRVVSVGRKVEDLLADPDSKEWLSISTELCGGTHITNT 774

Query: 773  REAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEK---- 828
            R+A+AFALLSEEGIAKG+RRITAVT G A +A E A S++ +++ AS++EG+LLEK    
Sbjct: 775  RDAKAFALLSEEGIAKGVRRITAVTAGCATQAMELASSIDSDINKASQLEGALLEKKIAS 834

Query: 829  --------------------------NQVRKAQKKVAEENLQKAVKVATETAEAAASNGK 862
                                      +++RKA+KK+ E+N+QKAVK A + AEAA S  K
Sbjct: 835  IKSGLDAAAIPAARKADLRGKVSKLEDELRKAKKKMGEQNIQKAVKSAMDAAEAALSGNK 894

Query: 863  PFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLE 922
            PFC++ V+VGLD  AVREAV+KV++QKG+P+M+FSTDE +NKAV+ AGVP  +      +
Sbjct: 895  PFCVTHVDVGLDTTAVREAVIKVMDQKGLPIMLFSTDEASNKAVIYAGVPPNAPSG--FK 952

Query: 923  VSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
            V +WLT ++ PLKGR G GK G+A GQG+DA+Q+  AM LA   A+MKL
Sbjct: 953  VLDWLTPSIAPLKGRGGGGKNGVAQGQGSDASQLKEAMALANSIASMKL 1001


>gi|357140315|ref|XP_003571715.1| PREDICTED: LOW QUALITY PROTEIN: alanyl-tRNA synthetase-like
           [Brachypodium distachyon]
          Length = 993

 Score = 1346 bits (3484), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 659/992 (66%), Positives = 796/992 (80%), Gaps = 44/992 (4%)

Query: 18  RVLLNPSLTLAVTNHHHSLISRFSASAVAAMPGADPQVVEWPATKVRDTFFKFFEDKNHV 77
           RVL  P     V       +S F+A+       A P   EWPA +VR+TF +++E K+H 
Sbjct: 7   RVLFLPKPPARVLPAAAIHLSSFAAATARPPMEASP---EWPARRVRETFIQYYESKSHT 63

Query: 78  NWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHND 137
            W SSPVVPV+DPTLLFANAGMNQ+KP+FLGTA P++QL +L+RACNTQKCIRAGGKHND
Sbjct: 64  RWPSSPVVPVDDPTLLFANAGMNQFKPVFLGTAAPDSQLGRLSRACNTQKCIRAGGKHND 123

Query: 138 LDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKA 197
           LDDVGKDTYHHTFFEMLGNWSFGDYFK EAI +AWELLT+VY+LP DR+YATYFGGDEKA
Sbjct: 124 LDDVGKDTYHHTFFEMLGNWSFGDYFKEEAIGYAWELLTQVYKLPTDRIYATYFGGDEKA 183

Query: 198 GLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVN 257
           GLAPD E+++IWLK+LP  +VLPFGCKDNFWEMGDTGPCGPC+EIH+DR GNRDAASLVN
Sbjct: 184 GLAPDIESKNIWLKYLPKEKVLPFGCKDNFWEMGDTGPCGPCTEIHFDRIGNRDAASLVN 243

Query: 258 NDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMP 317
           NDDPTCIEIWN+VFIQFNRE+DG+L+ LPAKHVDTG+GFERLTSILQNKMSNYDTDVFMP
Sbjct: 244 NDDPTCIEIWNLVFIQFNREADGALRTLPAKHVDTGMGFERLTSILQNKMSNYDTDVFMP 303

Query: 318 IFDAIQQ--ATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYV 375
           +FDAI Q    G +PYSGKVG DD  KVDMAYRVVADHIRTLSFAIADGS PGNEGREYV
Sbjct: 304 LFDAIHQLAGVGIQPYSGKVGTDDVGKVDMAYRVVADHIRTLSFAIADGSQPGNEGREYV 363

Query: 376 LRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFG 435
           LRRILRRAV +G + L A+ GFF+ LV++ V+VMGDVFPELK+ E  I++II  EE SF 
Sbjct: 364 LRRILRRAVHFGHQKLMAKQGFFSSLVHVFVRVMGDVFPELKENEKKIKDIIKDEEESFE 423

Query: 436 KTLLKGIEKFKKAAQDVQ---GKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGF 492
            TL KG EKFKKAA  V+   G VLSGQDAFILWDTYG+P+DLT++MA + GL VD+EGF
Sbjct: 424 NTLAKGYEKFKKAADAVKENGGAVLSGQDAFILWDTYGYPIDLTEVMAVDYGLTVDMEGF 483

Query: 493 NNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAI 552
             +M+EAR+++R+A+ K  G +IV+DA+ATA L  +G+ +TDDS KF   ++H SV+KAI
Sbjct: 484 TLSMEEARQKARNARFKAGGKSIVLDANATAQLRNQGLASTDDSPKF-QHKEHHSVVKAI 542

Query: 553 YTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIH 612
           YTGSEFI++     + G+VL S+SFYAEQGGQI+D G IEGL GSF V NVQ++ G+V+H
Sbjct: 543 YTGSEFIDTASGAEDFGLVLESTSFYAEQGGQIYDTGSIEGLSGSFTVSNVQVFAGYVLH 602

Query: 613 IGSLTEGAGR--FSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVV 670
           IGS  EG+     SVG+EV CKVDY+RR LIAPNHTCTHMLNFALREVLGDH+DQKGS+V
Sbjct: 603 IGSFMEGSDTKALSVGDEVRCKVDYNRRTLIAPNHTCTHMLNFALREVLGDHIDQKGSIV 662

Query: 671 LPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEV 730
           LPEKLRFDFSHGKPV PE LR+IE IVN+QIK EL+V ++E  LA+AK INGLRAVFGE+
Sbjct: 663 LPEKLRFDFSHGKPVQPEDLRKIEFIVNQQIKEELEVSAREIKLADAKRINGLRAVFGEI 722

Query: 731 YPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGI 790
           YPDPVRVV+IGRKVEDLLA+PE+KEWLSIS ELCGGTH+SNTR+A AFAL+ EEGIAKG+
Sbjct: 723 YPDPVRVVSIGRKVEDLLANPESKEWLSISTELCGGTHISNTRDAAAFALVXEEGIAKGV 782

Query: 791 RRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEK---------------------- 828
           RRITAVT   A++A + A S++ ++D+ASK+EG++LEK                      
Sbjct: 783 RRITAVTAECAFEAMKLASSIDADIDEASKLEGAILEKKIASIKNTLDAASIPAARKADL 842

Query: 829 --------NQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVRE 880
                   +Q+RKA+KK+ +EN+QKAVK A + AEAA S+GKPFC++ V+VGLD  AVRE
Sbjct: 843 RGKVTKLEDQLRKAKKKMGDENIQKAVKTAIDAAEAALSDGKPFCVAHVDVGLDTTAVRE 902

Query: 881 AVLKVIEQ-KGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCG 939
           AV+K + + K +P+M+FS+DE +NKAV+ AGVP   D     +V +WLT ++ PLKGR G
Sbjct: 903 AVVKAMNRFKSLPIMLFSSDEASNKAVIYAGVP--PDAPDGFKVLDWLTPSIAPLKGRGG 960

Query: 940 KGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
            GK GLA GQG+DA+Q+  AM+LA + A+MKL
Sbjct: 961 GGKNGLAQGQGSDASQLKEAMELATQIASMKL 992


>gi|218184221|gb|EEC66648.1| hypothetical protein OsI_32912 [Oryza sativa Indica Group]
          Length = 953

 Score = 1337 bits (3460), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 642/951 (67%), Positives = 778/951 (81%), Gaps = 38/951 (3%)

Query: 56  VEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQ 115
            EWPA++VR+TF  FFE K+H  W SSPVVPV+DPTLLFANAGMNQ+KP+FLGTA P+  
Sbjct: 5   TEWPASRVRETFISFFESKSHTRWPSSPVVPVDDPTLLFANAGMNQFKPVFLGTAAPDAP 64

Query: 116 LSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELL 175
           L +L RACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK EAI +AWELL
Sbjct: 65  LGRLRRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKEEAIGFAWELL 124

Query: 176 TKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGP 235
           T+VY+LP DR+YATYFGGDEK GLAPD E+++IWLK+LP  +VLPFGCKDNFWEMGDTGP
Sbjct: 125 TQVYKLPTDRIYATYFGGDEKFGLAPDTESKNIWLKYLPKEKVLPFGCKDNFWEMGDTGP 184

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPC+EIH+DR GNRDAASLVNNDDPTCIEIWN+VFIQFNRE+D +L+PLPAKHVDTG+G
Sbjct: 185 CGPCTEIHFDRVGNRDAASLVNNDDPTCIEIWNLVFIQFNREADCTLRPLPAKHVDTGMG 244

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQ--ATGARPYSGKVGADDADKVDMAYRVVADH 353
           FERLTSILQNKMSNYDTDVFMPIFDAI Q    G + YSGKVG +D DKVDMAYRVVADH
Sbjct: 245 FERLTSILQNKMSNYDTDVFMPIFDAIHQLAGNGIQSYSGKVGPEDVDKVDMAYRVVADH 304

Query: 354 IRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVF 413
           IRTLSFAIADGS PGNEGREYVLRRILRRAV +G + LKA+ GFF+ LV++ V++MGDVF
Sbjct: 305 IRTLSFAIADGSQPGNEGREYVLRRILRRAVHFGHQKLKAKQGFFSSLVHVFVQLMGDVF 364

Query: 414 PELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ---GKVLSGQDAFILWDTYG 470
           PELK  E  I++II  EE SF  TL KG EKFKKAA  V+   G VLSGQDAF+LWDTYG
Sbjct: 365 PELKDNEKKIKDIIKDEEESFENTLAKGFEKFKKAADAVKESGGTVLSGQDAFVLWDTYG 424

Query: 471 FPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGV 530
           +P+DLT++M  + GL VD EGF+ AM+EAR+++R+A+ K    +IV+DA+ATA L  +G+
Sbjct: 425 YPVDLTEVMGVDYGLSVDREGFDAAMEEARQKARNARFKAGENSIVLDANATAQLRNQGL 484

Query: 531 LATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGF 590
            +TDDS K+  ++D+ SV+KAIYTGSE++ +     + G+VL S+SFYAEQGGQI+D G 
Sbjct: 485 ASTDDSPKY-GYKDNDSVVKAIYTGSEYVSAASGDEDFGLVLESTSFYAEQGGQIYDTGK 543

Query: 591 IEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHM 650
           IEG FGSF V NVQ++ G+V+H+GS T+G+   SVG++V CKVDY RR LIAPNHTCTHM
Sbjct: 544 IEGSFGSFNVTNVQVFAGYVLHMGSFTKGSKALSVGDKVACKVDYARRALIAPNHTCTHM 603

Query: 651 LNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSK 710
           LNFALRE+LGDHVDQKGS+VLPEKLRFDFSHGKPV PE LR+IESIVN+QIK +L+VF++
Sbjct: 604 LNFALREILGDHVDQKGSIVLPEKLRFDFSHGKPVQPEDLRKIESIVNQQIKDKLEVFAR 663

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
           E  LA+AK INGLRAVFGE+YPDPVRVV++GRKVEDLLA+PE+KEWLSIS ELCGGTH+ 
Sbjct: 664 EIKLADAKRINGLRAVFGEIYPDPVRVVSVGRKVEDLLANPESKEWLSISTELCGGTHIK 723

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEK-- 828
           NT EAEAFALLSEEGIAKG+RRITAVT   A  A + A S++ E+++ASK+EG++LEK  
Sbjct: 724 NTSEAEAFALLSEEGIAKGVRRITAVTAKHASDAIKDASSIDSEINEASKLEGAILEKTI 783

Query: 829 ----------------------------NQVRKAQKKVAEENLQKAVKVATETAEAAASN 860
                                       +++RKA+KK+ EEN+QKAVK A + A+ A S 
Sbjct: 784 ASIKSKLDTALIPAARKADLKGRVSKLEDELRKAKKKMGEENIQKAVKFAIDAAQTALSE 843

Query: 861 GKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQ 920
           GK FC++ V+VGLD +A+REAV+KV +QK +P+M+FSTDE TNKAV+ AGVP  +  S  
Sbjct: 844 GKRFCVAHVDVGLDTSAIREAVIKVKDQKDLPIMLFSTDEATNKAVIYAGVPPSAANS-- 901

Query: 921 LEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           L+V +WLT ++ PLKG+ G GK G+A GQGT+A+Q+  AM++A + A+MKL
Sbjct: 902 LKVLDWLTPSIAPLKGKGGGGKNGIAQGQGTEASQLKEAMEVATQIASMKL 952


>gi|115481322|ref|NP_001064254.1| Os10g0182000 [Oryza sativa Japonica Group]
 gi|110288715|gb|ABG65948.1| Alanyl-tRNA synthetase, mitochondrial precursor, putative,
           expressed [Oryza sativa Japonica Group]
 gi|113638863|dbj|BAF26168.1| Os10g0182000 [Oryza sativa Japonica Group]
 gi|215694746|dbj|BAG89937.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 999

 Score = 1336 bits (3458), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 642/951 (67%), Positives = 778/951 (81%), Gaps = 38/951 (3%)

Query: 56  VEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQ 115
            EWPA++VR+TF  FFE K+H  W SSPVVPV+DPTLLFANAGMNQ+KP+FLGTA P+  
Sbjct: 51  TEWPASRVRETFISFFESKSHTRWPSSPVVPVDDPTLLFANAGMNQFKPVFLGTAAPDAP 110

Query: 116 LSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELL 175
           L +L RACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK EAI +AWELL
Sbjct: 111 LGRLRRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKEEAIGFAWELL 170

Query: 176 TKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGP 235
           T+VY+LP DR+YATYFGGDEK GLAPD E+++IWLK+LP  +VLPFGCKDNFWEMGDTGP
Sbjct: 171 TQVYKLPTDRIYATYFGGDEKFGLAPDTESKNIWLKYLPKEKVLPFGCKDNFWEMGDTGP 230

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPC+EIH+DR GNRDAASLVNNDDPTCIEIWN+VFIQFNRE+D +L+PLPAKHVDTG+G
Sbjct: 231 CGPCTEIHFDRVGNRDAASLVNNDDPTCIEIWNLVFIQFNREADCTLRPLPAKHVDTGMG 290

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQ--ATGARPYSGKVGADDADKVDMAYRVVADH 353
           FERLTSILQNKMSNYDTDVFMPIFDAI Q    G + YSGKVG +D DKVDMAYRVVADH
Sbjct: 291 FERLTSILQNKMSNYDTDVFMPIFDAIHQLAGNGIQSYSGKVGPEDVDKVDMAYRVVADH 350

Query: 354 IRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVF 413
           IRTLSFAIADGS PGNEGREYVLRRILRRAV +G + LKA+ GFF+ LV++ V++MGDVF
Sbjct: 351 IRTLSFAIADGSQPGNEGREYVLRRILRRAVHFGHQKLKAKQGFFSSLVHVFVQLMGDVF 410

Query: 414 PELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ---GKVLSGQDAFILWDTYG 470
           PELK  E  I++II  EE SF  TL KG EKFKKAA  V+   G VLSGQDAF+LWDTYG
Sbjct: 411 PELKDNEKKIKDIIKDEEESFENTLAKGFEKFKKAADAVKESGGTVLSGQDAFVLWDTYG 470

Query: 471 FPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGV 530
           +P+DLT++M  + GL VD EGF+ AM+EAR+++R+A+ K    +IV+DA+ATA L  +G+
Sbjct: 471 YPVDLTEVMGVDYGLSVDREGFDAAMEEARQKARNARFKAGENSIVLDANATAQLRNQGL 530

Query: 531 LATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGF 590
            +TDDS K+  ++D+ SV+KAIYTGSE++ +     + G+VL S+SFYAEQGGQI+D G 
Sbjct: 531 ASTDDSPKY-GYKDNDSVVKAIYTGSEYVSAASGDEDFGLVLESTSFYAEQGGQIYDTGK 589

Query: 591 IEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHM 650
           IEG FGSF V NVQ++ G+V+H+GS T+G+   SVG++V CKVDY RR LIAPNHTCTHM
Sbjct: 590 IEGSFGSFNVTNVQVFAGYVLHMGSFTKGSKALSVGDKVACKVDYARRALIAPNHTCTHM 649

Query: 651 LNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSK 710
           LNFALRE+LGDHVDQKGS+VLPEKLRFDFSHGKPV PE LR+IESIVN+QIK +L+VF++
Sbjct: 650 LNFALREILGDHVDQKGSIVLPEKLRFDFSHGKPVQPEDLRKIESIVNQQIKDKLEVFAR 709

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
           E  LA+AK INGLRAVFGE+YPDPVRVV++GRKVEDLLA+PE+KEWLSIS ELCGGTH+ 
Sbjct: 710 EIKLADAKRINGLRAVFGEIYPDPVRVVSVGRKVEDLLANPESKEWLSISTELCGGTHIK 769

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEK-- 828
           NT EAEAFALLSEEGIAKG+RRITAVT   A  A + A S++ E+++ASK+EG++LEK  
Sbjct: 770 NTSEAEAFALLSEEGIAKGVRRITAVTAKHASDAIKDASSIDSEINEASKLEGAILEKTI 829

Query: 829 ----------------------------NQVRKAQKKVAEENLQKAVKVATETAEAAASN 860
                                       +++RKA+KK+ EEN+QKAVK A + A+ A S 
Sbjct: 830 ASIKSKLDTALIPAARKADLKGRVSKLEDELRKAKKKMGEENIQKAVKFAIDAAQTALSE 889

Query: 861 GKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQ 920
           GK FC++ V+VGLD +A+REAV+KV +QK +P+M+FSTDE TNKAV+ AGVP  +  S  
Sbjct: 890 GKRFCVAHVDVGLDTSAIREAVIKVKDQKDLPIMLFSTDEATNKAVIYAGVPPSAANS-- 947

Query: 921 LEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           L+V +WLT ++ PLKG+ G GK G+A GQGT+A+Q+  AM++A + A+MKL
Sbjct: 948 LKVLDWLTPSIAPLKGKGGGGKNGIAQGQGTEASQLKEAMEVATQIASMKL 998


>gi|326519084|dbj|BAJ96541.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1008

 Score = 1321 bits (3418), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 652/995 (65%), Positives = 790/995 (79%), Gaps = 46/995 (4%)

Query: 17   ARVLLNPSLTLAVTNHHHSLISRFSASAVAAMPGADPQVV--EWPATKVRDTFFKFFEDK 74
            ARVLL  +  + +++   S ++  + +     P   P  V  +W A +VR+ F  FF+ K
Sbjct: 19   ARVLLATAAAIRLSSSRASTVTATATATATVGP---PMEVPSDWTAARVREVFIDFFKSK 75

Query: 75   NHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGK 134
            +H  W SSPVVPV+DPTLLFANAGMNQ+KP+FLGTA P++QL +L+RACNTQKCIRAGGK
Sbjct: 76   SHTPWPSSPVVPVDDPTLLFANAGMNQFKPVFLGTASPDSQLGRLSRACNTQKCIRAGGK 135

Query: 135  HNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGD 194
            HNDLDDVGKDTYHHTFFEMLGNWSFGDYFK  AI +AWELLT+VY+LP DR+YATYFGGD
Sbjct: 136  HNDLDDVGKDTYHHTFFEMLGNWSFGDYFKEGAIGYAWELLTQVYKLPTDRIYATYFGGD 195

Query: 195  EKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAAS 254
            EKAGLAPD E+++IWLK+LP  RVLPFGCKDNFWEMGDTGPCGPC+EIH+DR GNRDAAS
Sbjct: 196  EKAGLAPDTESKNIWLKYLPNERVLPFGCKDNFWEMGDTGPCGPCTEIHFDRIGNRDAAS 255

Query: 255  LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDV 314
            LVNNDDPTCIEIWN+VFIQFNRESDGSL+ LPAKHVDTG+GFERLTSILQNKMSNYDTDV
Sbjct: 256  LVNNDDPTCIEIWNLVFIQFNRESDGSLRSLPAKHVDTGMGFERLTSILQNKMSNYDTDV 315

Query: 315  FMPIFDAIQQ--ATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGR 372
            FMP+FDAI Q    G +PYSGKVG+DD  KVDMAYRVVADHIRTLSFAIADGS PGNEGR
Sbjct: 316  FMPLFDAIHQLAGVGIQPYSGKVGSDDVGKVDMAYRVVADHIRTLSFAIADGSQPGNEGR 375

Query: 373  EYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEA 432
            EYVLRRILRRAV +G + L A+ GFF+ LV++ V+VMGDVFPELK  E  I++II  EEA
Sbjct: 376  EYVLRRILRRAVHFGHQKLMAKQGFFSSLVDVFVRVMGDVFPELKDNEKKIKDIIKDEEA 435

Query: 433  SFGKTLLKGIEKFKKAAQDVQ---GKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDI 489
            SF  T+ KG E+FKKAA  V+   G VLSGQDAF+LWDTYG+P+DLT++MA + GL VD+
Sbjct: 436  SFENTIAKGYERFKKAADAVKENGGAVLSGQDAFVLWDTYGYPIDLTEVMAVDFGLSVDM 495

Query: 490  EGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQDHKSVI 549
            EGFN +M+EAR+++R+A+ K  G +IV+DA+AT+ L  +G+ +T+DS KF   + H SV+
Sbjct: 496  EGFNASMEEARQKARNARYKAGGKSIVLDANATSELRNQGLASTNDSPKF-QHEVHSSVV 554

Query: 550  KAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGF 609
            KAIYTGSEFI +     + G+VL S+SFYAEQGGQI+D G IEG  GSF V NVQ++ G+
Sbjct: 555  KAIYTGSEFIATASGDEDFGLVLESTSFYAEQGGQIYDTGSIEGPSGSFTVNNVQVFAGY 614

Query: 610  VIHIGSLTEG--AGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKG 667
            V+HIGS  EG  +   SVG+EV CKVDY RR LI+PNHTCTHMLNFAL+EVLGDHVDQKG
Sbjct: 615  VLHIGSFLEGPDSKALSVGDEVKCKVDYTRRTLISPNHTCTHMLNFALKEVLGDHVDQKG 674

Query: 668  SVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVF 727
            S+VLPEKLRFDFSHGKPV PE LR+IE IVN+QIK EL+V ++E  LA+AK INGLRAVF
Sbjct: 675  SIVLPEKLRFDFSHGKPVQPEDLRKIEYIVNKQIKDELEVSAQEIKLADAKRINGLRAVF 734

Query: 728  GEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIA 787
            GE+YPDPVRVV+IG KVEDLLA+PE+KEWLSIS ELCGGTH+SNTR+A AFAL+SEEGIA
Sbjct: 735  GEIYPDPVRVVSIGCKVEDLLANPESKEWLSISTELCGGTHISNTRDAAAFALISEEGIA 794

Query: 788  KGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEK------------------- 828
            KG+RRITAVT   A +A + A S++ ++++ASK++G+ LEK                   
Sbjct: 795  KGVRRITAVTAECASQAMKLASSIDTDINEASKLDGATLEKKIGSIKNTLDAAAIPAARK 854

Query: 829  -----------NQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAA 877
                       +Q+RKA+KK+ EEN+QKAVK   + AEA  S GKPFC++ V+VGLD  A
Sbjct: 855  ADLRGNISKLEDQLRKAKKKMGEENIQKAVKTVIDAAEATLSEGKPFCVAHVDVGLDTTA 914

Query: 878  VREAVLKVIEQ-KGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            VREAV+K + + K +P+MVFSTDE +NKAV+ AGVP   D     +V +WLT ++ PLKG
Sbjct: 915  VREAVVKAMNRFKSLPIMVFSTDEASNKAVIYAGVP--PDAPNGFKVLDWLTPSIAPLKG 972

Query: 937  RCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
            R G GK GLA GQG+DA++V  AM+LA + A+MKL
Sbjct: 973  RGGGGKNGLAQGQGSDASRVKEAMELATQIASMKL 1007


>gi|326491819|dbj|BAJ98134.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1004

 Score = 1317 bits (3409), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 640/963 (66%), Positives = 772/963 (80%), Gaps = 41/963 (4%)

Query: 47   AMPGADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIF 106
            A P  +    +WP+  VR  F  FF  + H  W SSPVVP  DPTLLFANAGMNQYKP+F
Sbjct: 44   AGPPMEEAAPDWPSALVRQVFIDFFRSRAHTPWPSSPVVPFEDPTLLFANAGMNQYKPVF 103

Query: 107  LGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNE 166
            LG ADP++ L +L RACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK++
Sbjct: 104  LGAADPDSPLGRLRRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKDQ 163

Query: 167  AIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDN 226
            AI +AWELLT+VY+LP DR+YATYFGGD+KAGLAPD +++DIWLK+LP  RVLPFGCKDN
Sbjct: 164  AIAYAWELLTQVYKLPTDRIYATYFGGDDKAGLAPDTDSKDIWLKYLPTERVLPFGCKDN 223

Query: 227  FWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
            FWEMGDTGPCGPC+EIH+DR GNRDAASLVNNDDPTCIEIWN+VFIQFNRE+DG+L+ LP
Sbjct: 224  FWEMGDTGPCGPCTEIHFDRIGNRDAASLVNNDDPTCIEIWNLVFIQFNREADGTLRSLP 283

Query: 287  AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGA--RPYSGKVGADDADKVD 344
            AKHVDTG+GFERLTSILQNKMSNYDTDVFMP+FDAI +  GA  +PYSGKVG+DD  KVD
Sbjct: 284  AKHVDTGMGFERLTSILQNKMSNYDTDVFMPLFDAIHKLAGAGIQPYSGKVGSDDVGKVD 343

Query: 345  MAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNI 404
            MAYRVVADHIRTLSFAIADGS PGN+GREYVLRRILRRAV +G + L A+ GFF+ LV++
Sbjct: 344  MAYRVVADHIRTLSFAIADGSRPGNDGREYVLRRILRRAVHFGHQKLMAKQGFFSSLVDV 403

Query: 405  VVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ---GKVLSGQD 461
             V+VMGDVFPELK  E +I++II  EEASF  TL KG E+FKKAA  V+   G VLSGQD
Sbjct: 404  FVRVMGDVFPELKDNEKNIKDIIKEEEASFESTLAKGYERFKKAADAVKENGGTVLSGQD 463

Query: 462  AFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADA 521
            AF+LWDTY +P+DLT++MA + GL VD+EGFN AM+EAR+++R+A+ K  G +IV+DA+A
Sbjct: 464  AFVLWDTYDYPIDLTEVMAVDFGLSVDMEGFNIAMEEARQKARNARYKAGGKSIVLDANA 523

Query: 522  TAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQ 581
            T+ L  +G+ +T+DS KF   + H SV+KAIYTGSEFI +     + G+VL S+SFYAEQ
Sbjct: 524  TSHLRNQGLASTNDSPKFK-HEVHSSVVKAIYTGSEFIATASGDEDFGLVLESTSFYAEQ 582

Query: 582  GGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGR--FSVGEEVICKVDYDRRK 639
            GGQI+D G IEG  GSF V NVQ++ G+V+HIGS  EG      SVG+EV CKVDY RR 
Sbjct: 583  GGQIYDTGSIEGPTGSFTVNNVQVFAGYVLHIGSFLEGPNSKALSVGDEVKCKVDYTRRT 642

Query: 640  LIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNE 699
            LIAPNHTCTHMLNFALREVLGDH+DQKGS+VLPEKLRFDFSHGKPV PE LR+IE IVN+
Sbjct: 643  LIAPNHTCTHMLNFALREVLGDHIDQKGSIVLPEKLRFDFSHGKPVQPEDLRKIEYIVNQ 702

Query: 700  QIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSI 759
            QIK EL+V ++E  L +AK INGLRAVFGE+YPDPVRVV+IGRKVEDLLA+PE+KEWLSI
Sbjct: 703  QIKDELEVSAQEIKLVDAKRINGLRAVFGEIYPDPVRVVSIGRKVEDLLANPESKEWLSI 762

Query: 760  SAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDAS 819
            S ELCGGTH+SNTR+A AFAL+SEEGIAKG+RRITAVT   A +A + A S++ ++++AS
Sbjct: 763  STELCGGTHISNTRDAAAFALISEEGIAKGVRRITAVTAECASQAMKLASSIDSDINEAS 822

Query: 820  KIEGSLLEKN------------------------------QVRKAQKKVAEENLQKAVKV 849
            K++G+ LEK                               Q+R+A+KK+ +EN+QKAVK 
Sbjct: 823  KLDGATLEKKIGSIKNTLDAAAIPAARKADLKGNVSKLEEQLREAKKKMGKENIQKAVKT 882

Query: 850  ATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQ-KGMPVMVFSTDETTNKAVVC 908
            A + AEAA S GKPFC++  +VGLD  AVREAV+K +++ KG+P+MVFSTDE +NKAV+ 
Sbjct: 883  AIDAAEAAVSEGKPFCVTHADVGLDTTAVREAVVKAMDRFKGLPIMVFSTDEASNKAVIY 942

Query: 909  AGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAA 968
            AGVP   D     +V +WLT ++ PLKG+ G GK GLA GQG+DA++V  AM+LA + A+
Sbjct: 943  AGVP--PDAPNGFKVLDWLTPSIAPLKGKGGGGKNGLAQGQGSDASRVKEAMELATQIAS 1000

Query: 969  MKL 971
            MKL
Sbjct: 1001 MKL 1003


>gi|222612529|gb|EEE50661.1| hypothetical protein OsJ_30891 [Oryza sativa Japonica Group]
          Length = 901

 Score = 1256 bits (3251), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 607/905 (67%), Positives = 737/905 (81%), Gaps = 37/905 (4%)

Query: 99  MNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 158
           MNQ+KP+FLGTA P+  L +L RACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS
Sbjct: 1   MNQFKPVFLGTAAPDAPLGRLRRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 60

Query: 159 FGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRV 218
           FGDYFK EAI +AWELLT+VY+LP DR+YATYFGGDEK GLAPD E+++IWLK+LP  +V
Sbjct: 61  FGDYFKEEAIGFAWELLTQVYKLPTDRIYATYFGGDEKFGLAPDTESKNIWLKYLPKEKV 120

Query: 219 LPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRES 278
           LPFGCKDNFWEMGDTGPCGPC+EIH+DR GNRDAASLVNNDDPTCIEIWN+VFIQFNRE+
Sbjct: 121 LPFGCKDNFWEMGDTGPCGPCTEIHFDRVGNRDAASLVNNDDPTCIEIWNLVFIQFNREA 180

Query: 279 DGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQ--ATGARPYSGKVG 336
           D +L+PLPAKHVDTG+GFERLTSILQNKMSNYDTDVFMPIFDAI Q    G + YSGKVG
Sbjct: 181 DCTLRPLPAKHVDTGMGFERLTSILQNKMSNYDTDVFMPIFDAIHQLAGNGIQSYSGKVG 240

Query: 337 ADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG 396
            +D DKVDMAYRVVADHIRTLSFAIADGS PGNEGREYVLRRILRRAV +G + LKA+ G
Sbjct: 241 PEDVDKVDMAYRVVADHIRTLSFAIADGSQPGNEGREYVLRRILRRAVHFGHQKLKAKQG 300

Query: 397 FFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKV 456
           FF+ LV++ V++MGDVFPELK  E  I++II  EE SF  TL KG EKFKKAA  V  K 
Sbjct: 301 FFSSLVHVFVQLMGDVFPELKDNEKKIKDIIKDEEESFENTLAKGFEKFKKAADAV--KE 358

Query: 457 LSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIV 516
             G DAF+LWDTYG+P+DLT++M  + GL VD EGF+ AM+EAR+++R+A+ K    +IV
Sbjct: 359 SGGTDAFVLWDTYGYPVDLTEVMGVDYGLSVDREGFDAAMEEARQKARNARFKAGENSIV 418

Query: 517 MDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSS 576
           +DA+ATA L  +G+ +TDDS K+  ++D+ SV+KAIYTGSE++ +     + G+VL S+S
Sbjct: 419 LDANATAQLRNQGLASTDDSPKY-GYKDNDSVVKAIYTGSEYVSAASGDEDFGLVLESTS 477

Query: 577 FYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYD 636
           FYAEQGGQI+D G IEG FGSF V NVQ++ G+V+H+GS T+G+   SVG++V CKVDY 
Sbjct: 478 FYAEQGGQIYDTGKIEGSFGSFNVTNVQVFAGYVLHMGSFTKGSKALSVGDKVACKVDYA 537

Query: 637 RRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESI 696
           RR LIAPNHTCTHMLNFALRE+LGDHVDQKGS+VLPEKLRFDFSHGKPV PE LR+IESI
Sbjct: 538 RRALIAPNHTCTHMLNFALREILGDHVDQKGSIVLPEKLRFDFSHGKPVQPEDLRKIESI 597

Query: 697 VNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEW 756
           VN+QIK +L+VF++E  LA+AK INGLRAVFGE+YPDPVRVV++GRKVEDLLA+PE+KEW
Sbjct: 598 VNQQIKDKLEVFAREIKLADAKRINGLRAVFGEIYPDPVRVVSVGRKVEDLLANPESKEW 657

Query: 757 LSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVD 816
           LSIS ELCGGTH+ NT EAEAFALLSEEGIAKG+RRITAVT   A  A + A S++ E++
Sbjct: 658 LSISTELCGGTHIKNTSEAEAFALLSEEGIAKGVRRITAVTAKHASDAIKDASSIDSEIN 717

Query: 817 DASKIEGSLLEK------------------------------NQVRKAQKKVAEENLQKA 846
           +ASK+EG++LEK                              +++RKA+KK+ EEN+QKA
Sbjct: 718 EASKLEGAILEKTIASIKSKLDTALIPAARKADLKGRVSKLEDELRKAKKKMGEENIQKA 777

Query: 847 VKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAV 906
           VK A + A+ A S GK FC++ V+VGLD +A+REAV+KV +QK +P+M+FSTDE TNKAV
Sbjct: 778 VKFAIDAAQTALSEGKRFCVAHVDVGLDTSAIREAVIKVKDQKDLPIMLFSTDEATNKAV 837

Query: 907 VCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEF 966
           + AGVP  +  S  L+V +WLT ++ PLKG+ G GK G+A GQGT+A+Q+  AM++A + 
Sbjct: 838 IYAGVPPSAANS--LKVLDWLTPSIAPLKGKGGGGKNGIAQGQGTEASQLKEAMEVATQI 895

Query: 967 AAMKL 971
           A+MKL
Sbjct: 896 ASMKL 900


>gi|168042124|ref|XP_001773539.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162675078|gb|EDQ61577.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 937

 Score = 1253 bits (3243), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 612/925 (66%), Positives = 725/925 (78%), Gaps = 34/925 (3%)

Query: 58  WPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLS 117
           WPA +VR+TF  FFE KNH    SSPVVPV+DPTLLFANAGMNQ+KPIFLGT DP +   
Sbjct: 7   WPANRVRETFNSFFESKNHTFVPSSPVVPVDDPTLLFANAGMNQFKPIFLGTVDPRSARG 66

Query: 118 KLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTK 177
            L RACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK EAI WAWELLT 
Sbjct: 67  NLKRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAIAWAWELLTS 126

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCG 237
           VY+LP DRLYATYFGGDE  GLA D+EARDIW   LP S VLPFGCKDNFWEMGD+GPCG
Sbjct: 127 VYKLPKDRLYATYFGGDENLGLAADDEARDIWRGLLPESHVLPFGCKDNFWEMGDSGPCG 186

Query: 238 PCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFE 297
           PCSEIH+DR G RDA+SLVN DDP C+EIWN+VFIQFNRE DGSLK LPA+HVDTGLGFE
Sbjct: 187 PCSEIHFDRIGGRDASSLVNMDDPNCLEIWNLVFIQFNREQDGSLKVLPAQHVDTGLGFE 246

Query: 298 RLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTL 357
           R+TS+LQ KMSNYDTD+F PIF AIQ+ATGAR YSGKVG DD D VDMAYRVVADHIRTL
Sbjct: 247 RVTSVLQEKMSNYDTDLFTPIFGAIQKATGAREYSGKVGKDDTDNVDMAYRVVADHIRTL 306

Query: 358 SFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELK 417
           SFAIADGS PGNEGREYVLRR+LRRAVRYG EVLKAQ+GFF+GLV+IVV+VMG+ FPELK
Sbjct: 307 SFAIADGSRPGNEGREYVLRRMLRRAVRYGREVLKAQEGFFSGLVDIVVEVMGEAFPELK 366

Query: 418 QREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQ 477
           + +A I+EII+ EE+SF +TL+KGIEKFKKAA +V+  VL  QDAFILWDT+GFP+DLT+
Sbjct: 367 KNQAKIKEIISEEESSFSRTLVKGIEKFKKAAAEVKDGVLGAQDAFILWDTFGFPIDLTE 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSF 537
           LMAEE GL VD EGFN  M+EARE++R A+ K  G A+VM+A+AT+ L K G+L TDD  
Sbjct: 427 LMAEEMGLKVDKEGFNRTMEEAREKARGARGKAGGKALVMEAEATSQLQKLGILPTDDKP 486

Query: 538 KFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFGS 597
           K+IW ++    +KAI+T S F ES     +VGIVL ++S+YAEQGGQI+D G +EG  G+
Sbjct: 487 KYIWHKNPTVTVKAIFTSSGFEES-TSDEDVGIVLDTTSYYAEQGGQIYDTGVLEGPNGA 545

Query: 598 FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALRE 657
           F VR VQIYGG+V+HIGS+  G G+ SVG++V  +VDY RR ++APNHTCTH+LN+AL+E
Sbjct: 546 FTVREVQIYGGYVLHIGSINNG-GKISVGDKVTSQVDYARRAVVAPNHTCTHLLNYALKE 604

Query: 658 VLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEA 717
           VLGDH+DQKGS+V P+KLRFDFSHGKP+D + L  IE+IV +QI+  + V++KEA+LAEA
Sbjct: 605 VLGDHIDQKGSLVAPDKLRFDFSHGKPIDSKDLGEIEAIVAQQIRDGMTVYAKEASLAEA 664

Query: 718 KCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEA 777
           K I GLRAVFGEVYPDPVRVVAIGR VEDLLADPEN  W  +S E CGGTHLSNT+EAEA
Sbjct: 665 KRIMGLRAVFGEVYPDPVRVVAIGRPVEDLLADPENPNWAKLSTEFCGGTHLSNTKEAEA 724

Query: 778 FALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEK--------- 828
           FAL+SEEGIAKG+RR+TA+T G A +A   +     ++D ASK+EG  LEK         
Sbjct: 725 FALVSEEGIAKGVRRVTALTMGAAKEAIHQSEVFSSQIDKASKLEGPALEKEVASLKNSL 784

Query: 829 ---------------------NQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCIS 867
                                 ++RKAQK  A  NLQ A+  A  +A+ A +  +PFC+ 
Sbjct: 785 ENVVIPAAKKAEFRTRLGELQERIRKAQKAAAGSNLQTALNGAVSSADTAVAQNQPFCVL 844

Query: 868 RVEVGLDAAAVREAVLKVIEQ-KGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEW 926
           R++VGLD  AVREAV  V+E+ K + VM+FS DE  NK +V AGVP+ S   + L+V +W
Sbjct: 845 RIDVGLDTNAVREAVTLVMEKHKDLAVMIFSVDEQKNKVLVYAGVPD-SAAKQGLKVLDW 903

Query: 927 LTAALQPLKGRCGKGKGGLASGQGT 951
           L  +L P+ G+ G GK GLA GQ T
Sbjct: 904 LRGSLAPVNGKGGGGKNGLAQGQVT 928


>gi|302838115|ref|XP_002950616.1| hypothetical protein VOLCADRAFT_120886 [Volvox carteri f.
            nagariensis]
 gi|300264165|gb|EFJ48362.1| hypothetical protein VOLCADRAFT_120886 [Volvox carteri f.
            nagariensis]
          Length = 1143

 Score = 1019 bits (2634), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 545/997 (54%), Positives = 662/997 (66%), Gaps = 84/997 (8%)

Query: 40   FSASAVAAMPGADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGM 99
            F A+AV   P        W   + R  F +FFE K H  W SS VVP NDPTLLF NAGM
Sbjct: 167  FLATAVLTQP--------WSGARTRAAFNEFFETKAHTYWASSSVVPHNDPTLLFTNAGM 218

Query: 100  NQ----------------------YKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHND 137
            NQ                      +KP+FLGT DPN+ + KL RACN+QKCIRAGGKHND
Sbjct: 219  NQASDQSQGQANWQHHHAYLPHSWFKPVFLGTVDPNSDMGKLKRACNSQKCIRAGGKHND 278

Query: 138  LDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKA 197
            LDDVGKD YHHTFFEMLGNWSFGDYFK EAI WAWELLTK Y+LPADRLYATYF GD   
Sbjct: 279  LDDVGKDVYHHTFFEMLGNWSFGDYFKEEAISWAWELLTKWYKLPADRLYATYFRGDPGQ 338

Query: 198  GLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVN 257
            GL  D+EAR+IWL+FLP SRVLP+G K+NFWEMGD GPCGPC+EIH+DR G RDAA LVN
Sbjct: 339  GLPADDEAREIWLRFLPESRVLPYGNKENFWEMGDQGPCGPCTEIHFDRIGGRDAADLVN 398

Query: 258  NDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMP 317
             DDP  +EIWN VFIQFNRE DG+LK LPAKHVDTG+G ER+TS+LQ KMSNY TD+F P
Sbjct: 399  ADDPNVLEIWNNVFIQFNREPDGTLKTLPAKHVDTGMGLERITSVLQGKMSNYATDLFGP 458

Query: 318  IFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLR 377
            IFDAIQQ TGAR Y+ K+G +DAD VDMAYRVVADHIRTLSF+IADG+ PGNEGR+YVLR
Sbjct: 459  IFDAIQQVTGARTYTDKIGKEDADGVDMAYRVVADHIRTLSFSIADGARPGNEGRDYVLR 518

Query: 378  RILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKT 437
            RILRRAVRYG E L A++GFF GLV++VV   G  FPEL ++   I  ++  EEA+F +T
Sbjct: 519  RILRRAVRYGRETLGAKEGFFAGLVDVVVANFGGFFPELVKQRDTIYSVLREEEAAFSRT 578

Query: 438  LLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMD 497
            L+KGIE+FKKAA       + G +AF+LWDTYGFP+DLTQLMAEERG+ VD+  +  A++
Sbjct: 579  LVKGIERFKKAASAATDNKIPGYEAFVLWDTYGFPVDLTQLMAEERGMTVDMPAYEAALN 638

Query: 498  EARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSE 557
            EARE+SR    K AG  I  +A+AT  L   GV  T+D+ K+    D  + + AI T   
Sbjct: 639  EAREKSRQGGKKAAGAGIKFEAEATGWLQSNGVPLTNDAPKY-GSSDVSAKVLAILTPGG 697

Query: 558  FIESVVPGNE----VGIVLASSSFYAEQGGQIFDEGFIEGLFG-SFYVRNVQIYGGFVIH 612
            F+ S     +    VG+VL ++SFYAE GGQI D G I G  G +  V + Q+  GFV+H
Sbjct: 698  FVASTSEAADQDGPVGLVLDTTSFYAESGGQIGDTGAIRGPEGAALVVSDCQVAAGFVLH 757

Query: 613  IGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLP 672
            +G  +     F VG+EV   VDY+RR LI PNHT TH+LNFAL+  LGDHVDQKGS+VLP
Sbjct: 758  VGEAS--VAPFRVGDEVTVSVDYERRSLIKPNHTFTHVLNFALKSTLGDHVDQKGSIVLP 815

Query: 673  EKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYP 732
            +KLRFDFS+  PV+   L  +E I  E + A + V S E  LA+A+ INGLRAVFGEVYP
Sbjct: 816  DKLRFDFSNAGPVEANQLAAVEKICREAVAAAMPVHSGEVPLAQARSINGLRAVFGEVYP 875

Query: 733  DPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRR 792
            DPVRVV+IGR VE+LLADP++    + S E CGGTHLSNT EAEAFALLSEEGIAKGIRR
Sbjct: 876  DPVRVVSIGRAVEELLADPKDAANAAFSIEFCGGTHLSNTSEAEAFALLSEEGIAKGIRR 935

Query: 793  ITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATE 852
            I AVT G A +A EAA  L+ E+   +      L ++Q+ KA K   +E++  AV  A +
Sbjct: 936  IVAVTRGDAVRAIEAAADLKAELASIAT-----LPEDQLEKACKGF-KESVDAAVIPAVD 989

Query: 853  TA------------------------------------EAAASNGKPFCISRVEVGLDAA 876
             A                                    +AA + GK F I R++VGLD  
Sbjct: 990  KAALRDELAVLGRRVIEFQKAAAAANKALAAERAVAAADAAVAAGKSFVIGRLDVGLDTR 1049

Query: 877  AVREAVLKVIEQKGMPVMVF-STDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLK 935
            AV EA   +I +      +F S D    KA+  A VP+    + +L+ +EW++ AL PL 
Sbjct: 1050 AVGEACSAIIAKHSTLAALFVSVDAEKGKALAYAAVPDSV--TDRLKANEWVSTALGPLG 1107

Query: 936  GRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKLR 972
            G+ G      A GQG +  +V  A+  A  FA  KL+
Sbjct: 1108 GKGGGKANN-AQGQGANVEKVDEALGAATAFAESKLQ 1143


>gi|384247147|gb|EIE20634.1| hypothetical protein COCSUDRAFT_67160 [Coccomyxa subellipsoidea
            C-169]
          Length = 1151

 Score = 1003 bits (2594), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 543/951 (57%), Positives = 666/951 (70%), Gaps = 47/951 (4%)

Query: 58   WPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLS 117
            W   +VR TF +FFE K H    SS VVP NDPTLLFANAGMNQ+KPIFLGT DPN+  +
Sbjct: 211  WSGDRVRATFVEFFETKGHTAVPSSSVVPHNDPTLLFANAGMNQFKPIFLGTVDPNSDFA 270

Query: 118  KLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTK 177
            +L+RAC++QKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFGDYFK EAI WAWELLT+
Sbjct: 271  RLSRACDSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKEAIAWAWELLTQ 330

Query: 178  VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCG 237
            VY+L   RLYATYFGGD   GL PD EA+  WL+ LP  RVLPFGCKDNFWEMGD GPCG
Sbjct: 331  VYKLDPARLYATYFGGDSAQGLEPDEEAKSFWLELLPTERVLPFGCKDNFWEMGDVGPCG 390

Query: 238  PCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFE 297
            PCSEIHYDR G+RDAA LVN DDP  +EIWNIVFIQFNRE+D SL+PLPAKHVDTG+G E
Sbjct: 391  PCSEIHYDRIGSRDAAHLVNMDDPNVLEIWNIVFIQFNREADASLRPLPAKHVDTGMGME 450

Query: 298  RLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTL 357
            R+TS+LQ+K+SNY TD+F PIFDAIQ  TGAR Y+ +VG DD D  DMAYRVVADHIRTL
Sbjct: 451  RVTSVLQDKVSNYATDIFTPIFDAIQTVTGARSYTDRVGKDDTDGKDMAYRVVADHIRTL 510

Query: 358  SFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELK 417
            SFAIADG+ PGN+GR YVLRR+LRRAVRYG EVL A++GFF  LV+ VV   G  +PEL 
Sbjct: 511  SFAIADGAQPGNDGRNYVLRRVLRRAVRYGQEVLSAKEGFFVKLVDSVVANFGGFYPELI 570

Query: 418  QREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQ 477
             +  HI ++I  EEASF +TL KGIE+FKKAA +  G   SG+DAF L+DTYGFP+DLT+
Sbjct: 571  AKRDHITDVIREEEASFSRTLQKGIERFKKAAANASGGSFSGKDAFELYDTYGFPMDLTE 630

Query: 478  LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSF 537
            LMAEE GL +D + F   M+E R+RSR+A     G  +  +A+ATA L   GV  TDDS 
Sbjct: 631  LMAEEMGLKLDKKAFEACMEEQRQRSRAAGKAGGGPTLKFEAEATAHLANSGVPVTDDSP 690

Query: 538  KFIWFQDHKSVIKAIYTGSEFIESVV-PGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFG 596
            K+      K+ ++AI + S F++S       +G+VL  + FYAE GGQ+ D G + G  G
Sbjct: 691  KYT-PGSVKTTVRAILSASGFVDSTAGAAGPLGVVLERTPFYAESGGQVADSGELAGPSG 749

Query: 597  S-FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFAL 655
            + F V++ ++  G+V+H+G   EG  R  VG+ V   VD  RR  I PNHT TH+LNFAL
Sbjct: 750  AIFTVQDTKVAAGYVLHVGEAAEGTLR--VGDTVSADVDIIRRARIVPNHTFTHVLNFAL 807

Query: 656  REVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLA 715
            REVLGDH+DQKGS+V PE+LRFDFSHG P+D   L +IE+I N+Q+ A+L +FSK+  L+
Sbjct: 808  REVLGDHIDQKGSIVQPERLRFDFSHGGPIDGPTLGKIEAICNQQLAADLGIFSKDVALS 867

Query: 716  EAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLL---ADPENKEWLSISAELCGGTHLSNT 772
            +A+ INGLRAVFGE YPDPVRVV+IG+ VEDLL   ADPEN ++   S E CGGTHL +T
Sbjct: 868  DARQINGLRAVFGEQYPDPVRVVSIGKSVEDLLANTADPENAKY---SVEFCGGTHLKST 924

Query: 773  REAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLE----- 827
             +A AFALLSEEGIAKG+RR+ AVT+  A  A   A +L K ++ A K+ G  LE     
Sbjct: 925  GQARAFALLSEEGIAKGVRRVVAVTSAEAEAAVARAEALTKAMEAAQKLTGPALEAEIAT 984

Query: 828  ------------------KNQVRKAQKKVAEEN-------LQKAVKVATETAEAAASNGK 862
                              +N +   QK + E++         +A  VA E A+AAAS+G+
Sbjct: 985  LRQGIDGSAIPAATKASLRNSLTALQKTLLEQHKSAAAANKARATAVAVEAADAAASSGQ 1044

Query: 863  PFCISRVEVGLDAAAVREAVLKVIEQK--GMPVMVFSTDETTNKAVVCAGVPEKSDQSKQ 920
             F + ++EVGLD+ AV EA    I +K   MPV++ + D    KA+  AGVP+    SKQ
Sbjct: 1045 KFVVVQLEVGLDSKAVLEA-WNAIHKKHPDMPVVIVTADAAKGKALAYAGVPDA--LSKQ 1101

Query: 921  LEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
            L   EW+ A L    G  G GK   A GQG +  +V  A+  A EFA +KL
Sbjct: 1102 LNAGEWVKAPLA-ALGGKGGGKPTTAQGQGPNVDKVPDAIRAAEEFARLKL 1151


>gi|325179830|emb|CCA14233.1| unnamed protein product [Albugo laibachii Nc14]
          Length = 1022

 Score =  969 bits (2505), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 495/971 (50%), Positives = 636/971 (65%), Gaps = 67/971 (6%)

Query: 56   VEWPATKVRDTFFKFFEDKN---HVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADP 112
            VEWPAT++R+TF  +F   +   H  + S PV+P++DPTLLF NAGMNQ+KPIFLG  DP
Sbjct: 57   VEWPATRIRETFINYFRKHSFHPHTFYPSCPVIPLDDPTLLFINAGMNQFKPIFLGQVDP 116

Query: 113  NTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAW 172
            N  +SKL RA N+QKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFGDYFK E IE ++
Sbjct: 117  NHPMSKLQRAVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKQETIEMSF 176

Query: 173  ELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGD 232
             LLTKVY++ A+RLYATYFGGD K  L PD E R IWLK+LP+SRVLPFGCKDNFWEMGD
Sbjct: 177  NLLTKVYQIDAERLYATYFGGDPKQQLLPDEETRAIWLKYLPSSRVLPFGCKDNFWEMGD 236

Query: 233  TGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDT 292
             GPCGPC+EIHYDR GNRDAA+LVN D P  IEIWN VFIQFNRE+ G L PLP KHVDT
Sbjct: 237  IGPCGPCTEIHYDRLGNRDAAALVNADVPDVIEIWNNVFIQFNRENSGKLVPLPNKHVDT 296

Query: 293  GLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVAD 352
            G+GFERL SILQ K SNYDTDVF P+F  IQ  T A PY GK+GA+DA+  DMAYRVVAD
Sbjct: 297  GMGFERLASILQGKTSNYDTDVFTPLFHTIQSITKAEPYEGKLGAEDANNKDMAYRVVAD 356

Query: 353  HIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDV 412
            HIRTL+FAIADG  P N+GR YVLRRILRRAVRYG + L A  GF N LV +VV +M + 
Sbjct: 357  HIRTLTFAIADGVMPSNDGRGYVLRRILRRAVRYGQQFLNAPKGFLNQLVRVVVDMMHNT 416

Query: 413  FPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG---------KVLSGQDAF 463
            FPELK ++  + + I  EE SFG+TL KGIEKF+K  + VQG           +SG+DAF
Sbjct: 417  FPELKVKQNEVEQAILEEEESFGRTLNKGIEKFRKIVESVQGARDGEKQQAPAISGKDAF 476

Query: 464  ILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGG---AIVMDAD 520
             L+D+ GFPLDLTQ+MAEE G+ VD+EG+   M    ERS+  + K +G     +V++A 
Sbjct: 477  FLYDSMGFPLDLTQVMAEEEGMTVDVEGYGEQMKLQSERSKQDRKKGSGDNARPLVLEAQ 536

Query: 521  ATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGS----EFIESVV--PGNEVGIVLAS 574
             T AL + G+  T+D  K+ W +  ++ + AI+T +    EF+ +V     + +GIVL  
Sbjct: 537  ETNALLELGIPTTNDDAKYEWNKALQAKVVAIFTTTDSSCEFVSAVTAQKHDRIGIVLDR 596

Query: 575  SSFYAEQGGQIFDEGFIEG---LFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVIC 631
            +SFYA+ GGQ++D G +E        F +  V+ Y G+V+H G+L  G+    VG+++ C
Sbjct: 597  TSFYAQAGGQVYDTGSLEKDQPAGTRFNIDAVESYAGYVLHAGTLESGS--LQVGDDISC 654

Query: 632  KVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLR 691
            +VDYDRR  IAPNHT TH+LNFALR+VL  +VDQ+GS+V   ++RFDF+  KP+ P  L+
Sbjct: 655  QVDYDRRSKIAPNHTMTHVLNFALRKVLVKNVDQRGSLVDDVRMRFDFTTNKPLSPSQLQ 714

Query: 692  RIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADP 751
             +E++    IK EL VF+K  +  +A+ I GLRAVFGE YPD VRVV+IG+ ++ +L DP
Sbjct: 715  AVENMCENSIKQELQVFTKNTSQTDARRIQGLRAVFGETYPDTVRVVSIGQMIDPMLKDP 774

Query: 752  ENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSL 811
            EN  W + S E CGGTHL NT++A  F L  E  IA+GIRRI+A T   A  A +    L
Sbjct: 775  ENSTWSNFSVEFCGGTHLENTKQARKFVLYEEGAIARGIRRISAYTGQEALNAEKRGQEL 834

Query: 812  EKEVD---------------------DASKIEGSLLEKNQVRKA-----------QKKVA 839
            +K++D                     DAS I  SL  K+ +RK            +KK A
Sbjct: 835  QKQLDCIKAMQDSDFIANVTAFRPILDASLI--SLPLKDHLRKELEVLVDRVKTLKKKEA 892

Query: 840  EENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMP---VMVF 896
                  A+  A +  + A      F ++R++ G D    RE +  +     +P    MVF
Sbjct: 893  ALRAADAITQAIKQVKEAQEKSTKFVVARMQAGTDVKLGREILAAM--SNALPEGSFMVF 950

Query: 897  STDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGL-ASGQGTDAAQ 955
            STD+   K      V +    +KQL+  +W+  A++P+ G+ G GK  L A+GQ      
Sbjct: 951  STDDDAKKTAAFCQVSQHHADTKQLDARQWVNEAMKPMNGKGG-GKSALNANGQAKIMDH 1009

Query: 956  VTPAMDLAAEF 966
            +  AM +A  +
Sbjct: 1010 IEEAMAIAESY 1020


>gi|301102849|ref|XP_002900511.1| alanyl-tRNA synthetase, mitochondrial precursor [Phytophthora
           infestans T30-4]
 gi|262101774|gb|EEY59826.1| alanyl-tRNA synthetase, mitochondrial precursor [Phytophthora
           infestans T30-4]
          Length = 980

 Score =  967 bits (2499), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 492/962 (51%), Positives = 641/962 (66%), Gaps = 56/962 (5%)

Query: 55  VVEWPATKVRDTFFKFFEDKN---HVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTAD 111
           V  WPA ++R TFF++F+++    H  +KS PVVP++DPTLLF NAGMNQYKPIFLG  D
Sbjct: 23  VESWPAARIRKTFFEYFQNQKELPHTFYKSCPVVPLDDPTLLFINAGMNQYKPIFLGQVD 82

Query: 112 PNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWA 171
           P+  ++KL RACN+QKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFG+YFK EA+  +
Sbjct: 83  PSHPMAKLVRACNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGNYFKKEAVHLS 142

Query: 172 WELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMG 231
           + LLT+V+ +  DRLYATYFGGDEK GL  D E R+IWL +LP  RVLPFGCKDNFWEMG
Sbjct: 143 FTLLTEVFGIDKDRLYATYFGGDEKQGLPSDEETREIWLNYLPTERVLPFGCKDNFWEMG 202

Query: 232 DTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVD 291
           D GPCGPC+EIHYDR GNRDA+ LVN D P  IEIWN VFIQFNRE DG L PLP KHVD
Sbjct: 203 DVGPCGPCTEIHYDRIGNRDASELVNADRPDVIEIWNNVFIQFNREQDGKLVPLPHKHVD 262

Query: 292 TGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVA 351
           TG+GFERL SILQ K SNYDTDVF P+F AIQ++T A PY+GK+G +D DK DMAYRVVA
Sbjct: 263 TGMGFERLASILQGKDSNYDTDVFTPLFAAIQKSTKAAPYTGKLGEEDPDKKDMAYRVVA 322

Query: 352 DHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGD 411
           DH+RTL+FAI DG+ P N+GR YVLRRILRRAVRYG + L A  GF   LV +VV ++G+
Sbjct: 323 DHVRTLTFAITDGAVPSNDGRGYVLRRILRRAVRYGQQFLNAPSGFLTELVPVVVNMLGE 382

Query: 412 VFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK---VLSGQDAFILWDT 468
            FPEL Q++  + EII  EE SFG+TL KGIE+FKK AQ ++     V+ G+DAF L+D+
Sbjct: 383 AFPELVQKQKEVEEIILDEEKSFGRTLNKGIERFKKIAQGIREANKLVVPGEDAFFLYDS 442

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA-----IVMDADATA 523
            GFP+DLT++MAEE G+ VDI+G+   M    ERS+   +++ GG+     +V++A  T+
Sbjct: 443 MGFPIDLTEIMAEEEGMTVDIKGYEECMRLQSERSK--MDRKKGGSNGARPLVLEARETS 500

Query: 524 ALHKRGVLATDDSFKFIWFQDHKSVIKAIYT----GSEFIESVVPGN--EVGIVLASSSF 577
            L  + + ATDD  K+ W     + + AI+T     S+F++ V  G+   VG++L  +SF
Sbjct: 501 TLAGKHISATDDMAKYEWNVKTSAKVVAIFTTTESSSDFVDEVKAGDFERVGVILDKTSF 560

Query: 578 YAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDR 637
           Y++ GGQI+D G +        V +V+ Y G+V+H+GS+  G+    VG+ V C+VDY R
Sbjct: 561 YSQAGGQIYDTGVLTASNLKLDVDSVESYAGYVMHMGSIATGS--IKVGDSVACEVDYAR 618

Query: 638 RKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIV 697
           R  IAPNHT TH LNFALR+VLG  VDQ+GS+V   +LRFDF++ K + P  L  +E+I 
Sbjct: 619 RAKIAPNHTMTHALNFALRKVLGTVVDQRGSLVDESRLRFDFTNNKALKPAQLAEVEAIC 678

Query: 698 NEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWL 757
           ++ IK +L+V+++ +  AEAK I GLRAVFGE YPD VRVV+IG+ +  +L DPE  +W 
Sbjct: 679 DDLIKQQLEVYTQNSAQAEAKRIQGLRAVFGETYPDFVRVVSIGQPIAPMLEDPEKSKWS 738

Query: 758 SISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDD 817
           + S E CGGTHL NT+EA+ F L  E  IAKGIRR++A T  LA +A E    L+ E+D 
Sbjct: 739 NFSVEFCGGTHLKNTKEAKRFVLYEEGAIAKGIRRVSAYTCDLAVEAEERGAKLQVELDA 798

Query: 818 ASKIEG-------------------SLLEKNQVRKAQKKVAEE-----------NLQKAV 847
             K++G                   SL  K+++RK    +                   V
Sbjct: 799 IDKLDGNEFVESVSAFKPVLDQALISLPLKDKLRKQVDSLVNRVKKIKKEAAAARAANGV 858

Query: 848 KVATETAEAAASNGKPFCISRVEVGLDAAAVREAV--LKVIEQKGMPVMVFSTDETTNKA 905
           + AT  A  A   G+   + +++VG D+   RE +  +  I   G   M+FSTD   NK 
Sbjct: 859 RDATAEATKAKEAGQEIVVVKLDVGTDSKLGREMLEAMSTIIPTG-SFMIFSTDSDANKT 917

Query: 906 VVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGL-ASGQGTDAAQVTPAMDLAA 964
                V +    SKQL+  +W+  A+  +KG+ G GK  L A+GQ     +V  A+ LA 
Sbjct: 918 AAFTQVSQHHIDSKQLDARKWVNHAMVVMKGKGG-GKDALNATGQAKSVDKVDEAVALAK 976

Query: 965 EF 966
            F
Sbjct: 977 SF 978


>gi|348689017|gb|EGZ28831.1| hypothetical protein PHYSODRAFT_473521 [Phytophthora sojae]
          Length = 981

 Score =  963 bits (2490), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 498/978 (50%), Positives = 641/978 (65%), Gaps = 61/978 (6%)

Query: 43  SAVAAMPGADPQVVE-WPATKVRDTFFKFFEDKN---HVNWKSSPVVPVNDPTLLFANAG 98
           S VAA+    P  VE WPA ++R TF  FF ++    H  WKS PVVP++DPTLLF NAG
Sbjct: 9   SQVAAL---SPFSVENWPAARIRKTFVDFFTNQTELPHTFWKSCPVVPLDDPTLLFINAG 65

Query: 99  MNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 158
           MNQYKPIFLG  DP+  +SKL RACN+QKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWS
Sbjct: 66  MNQYKPIFLGQVDPSHPMSKLVRACNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWS 125

Query: 159 FGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRV 218
           FG+YFK EA+  ++ LLT+V+ +  +RLYATYFGGDEK GL  D E R IWL +LPA RV
Sbjct: 126 FGNYFKKEAVHMSFTLLTEVFGIDKERLYATYFGGDEKQGLPSDEETRQIWLNYLPAERV 185

Query: 219 LPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRES 278
           LPFGCKDNFWEMGD GPCGPC+EIHYDR GNRDA+ LVN D P  IEIWN VFIQFNRE 
Sbjct: 186 LPFGCKDNFWEMGDVGPCGPCTEIHYDRIGNRDASKLVNADLPDVIEIWNNVFIQFNREQ 245

Query: 279 DGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGAD 338
           DG L PLP KHVDTG+GFERL SILQ K SNYDTDVF P+F AIQ++T A PY+GK+G +
Sbjct: 246 DGKLVPLPHKHVDTGMGFERLASILQGKDSNYDTDVFTPLFAAIQKSTKAAPYTGKLGKE 305

Query: 339 DADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFF 398
           D DK DMAYRVVADH+RTL+FAI DG+ P N+GR YVLRRILRRAVRYG + L A  GF 
Sbjct: 306 DPDKKDMAYRVVADHVRTLTFAITDGAVPSNDGRGYVLRRILRRAVRYGQQFLNAPCGFL 365

Query: 399 NGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV------ 452
             LV +VV ++G+ FPEL Q++  + EII  EE SFG+TL KGIE+FKK AQ +      
Sbjct: 366 TELVPVVVNMLGEAFPELIQKQKEVEEIILDEEKSFGRTLNKGIERFKKIAQGIREANAG 425

Query: 453 --QGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQ 510
             +  V+ G+DAF L+D+ GFP+DLT++M EE G+ VD++G+   M    ERS++ + K 
Sbjct: 426 SDKALVVPGEDAFFLYDSMGFPIDLTEIMVEEEGMTVDVKGYEECMRLQSERSKTDRKKG 485

Query: 511 AGGA---IVMDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYT----GSEFIESVV 563
                  +V++A  T+AL  + + ATDD  K+ W     + + AI+T     S+F++ V 
Sbjct: 486 GNNGARPLVLEARETSALAGKSITATDDMAKYEWSIKTSAKVVAIFTTTESSSDFVDEVK 545

Query: 564 PGN--EVGIVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAG 621
            G+   VG++L  +SFYA+ GGQI+D G + G      V +V+ Y G+V+H+G +  G+ 
Sbjct: 546 AGDFERVGVILDKTSFYAQAGGQIYDTGVVSGANFKLDVDSVESYAGYVMHMGPIASGS- 604

Query: 622 RFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSH 681
              VG+ V C+VDY RR  IAPNHT TH+LNFALR+VLG  VDQ+GS+V   +LRFDF++
Sbjct: 605 -IKVGDAVECQVDYARRSKIAPNHTMTHVLNFALRKVLGTTVDQRGSLVDESRLRFDFTN 663

Query: 682 GKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIG 741
            K +    L  +E+I ++ IK +L+V+++++  AEAK I GLRAVFGE YPD VRVV+IG
Sbjct: 664 NKALKANQLAEVEAICDDIIKQQLEVYTQDSAQAEAKRIQGLRAVFGETYPDFVRVVSIG 723

Query: 742 RKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLA 801
           + +  +L DPEN  W + S E CGGTHL NT+EA+ F L  E  IAKGIRR++A T  LA
Sbjct: 724 QPIAPMLEDPENSTWSNFSVEFCGGTHLKNTKEAKKFVLYEEGAIAKGIRRVSAYTCDLA 783

Query: 802 YKAFEAACSLEKEVDDASKIEG-------------------SLLEKNQVRKAQKKVAEE- 841
            +A E    L+ E++    ++G                   SL  K+Q+RK    +    
Sbjct: 784 KEAEERGAKLQAELNAIDMMDGNEFVERVSAFKPVLDQALISLPLKDQLRKQVDGLVNRV 843

Query: 842 ----------NLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAV--LKVIEQK 889
                          V+ AT  A  A   G+   + + +VG D+   RE +  +  I   
Sbjct: 844 KKIKKEAAAARAANGVRDATAEATKAKEAGQEIVVVKFDVGTDSKLGREMLEAMTTIIPT 903

Query: 890 GMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGL-ASG 948
           G   M+FSTD   NK      V +    SKQL+  +W+  A+  +KG+ G GK  L A+G
Sbjct: 904 G-SFMIFSTDSDANKTAAFTQVSQHHVDSKQLDARKWVNHAMAVMKGK-GGGKDALNATG 961

Query: 949 QGTDAAQVTPAMDLAAEF 966
           Q     +V  A+ LA  F
Sbjct: 962 QAKTVEKVDEAVALAKAF 979


>gi|440792626|gb|ELR13835.1| alanine-tRNA ligase [Acanthamoeba castellanii str. Neff]
          Length = 954

 Score =  950 bits (2456), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 503/957 (52%), Positives = 644/957 (67%), Gaps = 52/957 (5%)

Query: 56  VEWPATKVRDTFFKFF-EDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNT 114
           +EWP ++VR TF  +F E + H++ +SS VVP +DPTLLFANAGMNQ+KPIFLG  DP +
Sbjct: 10  IEWPVSRVRQTFVDYFVEKQQHLHVRSSSVVPHDDPTLLFANAGMNQFKPIFLGQVDPKS 69

Query: 115 QLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWEL 174
           + +   RA N+QKCIRAGGKHNDL+DVGKDTYHHTFFEMLGNWSFGDYFK EAI WAW+L
Sbjct: 70  EQATWKRAANSQKCIRAGGKHNDLEDVGKDTYHHTFFEMLGNWSFGDYFKEEAISWAWDL 129

Query: 175 LTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTG 234
           LT VY LPA+RLYATYF GDE+ GLA D EAR IWLKFLPA RVLP+G K+NFWEMG TG
Sbjct: 130 LTNVYGLPAERLYATYFRGDEEDGLAADEEARAIWLKFLPAERVLPYGRKENFWEMGATG 189

Query: 235 PCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           PCGPCSEIH+DR G RDAASLVN DDPT IEIWN+VFIQFNRE DG LK LPA+HVDTG+
Sbjct: 190 PCGPCSEIHFDRLGGRDAASLVNADDPTVIEIWNLVFIQFNREDDGKLKALPARHVDTGM 249

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           G ER+TSILQ K+SNYDTDVF PIF  IQ+ TGA+PY G+VGADD D  DMAYRVVADHI
Sbjct: 250 GLERITSILQKKLSNYDTDVFTPIFARIQEITGAQPYGGRVGADDVDTRDMAYRVVADHI 309

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RTLSFAI DG+ PG  GR YV+RRILRRAVRYG ++L A+DGFF+ LV +V++ +GD FP
Sbjct: 310 RTLSFAINDGAVPGAVGRNYVVRRILRRAVRYGKQILGAEDGFFHKLVPVVLESLGDAFP 369

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ-GKVLSGQDAFILWDTYGFPL 473
           EL++  AH+ + I  EE +F KTL KG++KF KA + +Q G  +SG+ AF L+ TYGFPL
Sbjct: 370 ELRRDPAHLTQTIMEEEVAFTKTLAKGLKKFAKATEKMQRGDTISGEVAFRLYGTYGFPL 429

Query: 474 DLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLAT 533
           DLT LMAEE+GL VD  GF  A       + +A  K    A+ +   A A L    V+ T
Sbjct: 430 DLTTLMAEEKGLKVDKAGFKAAKTAQPTGAVTAMQK---AALALGTHAVAHLQGVPVVPT 486

Query: 534 DDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEG 593
           DD+ K+I   D  + ++AI+TG EF +SV      G+VL  ++FYAE GGQ+ D G ++ 
Sbjct: 487 DDAAKYI-DSDVDATVRAIWTGKEFADSVTDA-AAGVVLDRTNFYAESGGQVADNGVLKT 544

Query: 594 LFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNF 653
             G   V +VQ YGGFV+H+G++    G   VG+ V   VD  RR  +  NHT TH++N 
Sbjct: 545 STGQQTVEDVQTYGGFVVHMGAVQ---GTLRVGDAVRLSVDASRRHSLKSNHTTTHLVNH 601

Query: 654 ALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEAT 713
           ALREVLG HV+Q+GS+V PE+LRFDFSH KPV  + L  ++  V  QI  +L V +KE  
Sbjct: 602 ALREVLGAHVEQRGSIVQPERLRFDFSHNKPVSGDQLAAVDKAVLGQIAQDLPVDAKEVP 661

Query: 714 LAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTR 773
           L +A  ING+RAVFGE YPDPVRVV  G  V++LLA P N EW   + ELCGGTHL+ T 
Sbjct: 662 LKDALSINGIRAVFGETYPDPVRVVVAGPTVDELLAAPSNPEWKKYAIELCGGTHLARTS 721

Query: 774 EAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKNQVRK 833
           EA +FA++SEE +A+GIRR+ A T   A +A   A  L+++++ A+ ++G+ LE+ ++++
Sbjct: 722 EAVSFAVISEEALARGIRRVVAFTGDAARQAVARADELQRKIEAAAALKGADLEE-EIKR 780

Query: 834 AQKKV--AEENLQKAVKVATE--------TAEAAASNGKP-------------------- 863
             K +  AE+ +  A +V +         +A AA+ N K                     
Sbjct: 781 LDKAINDAEQPIPAARQVQSRALLDKLRGSAFAASKNSKAEQLEAAQQYAEQVLAALGEA 840

Query: 864 ----FCISRVEVGLDAAAVREAVLKVIEQK--GMPVMVFSTDETTNKAVVCAGVPEKSDQ 917
                 I  ++VG +  A+  A+ K I  K   + V++ S +E   K  V   V + SD 
Sbjct: 841 TTDKAHIGHLDVGSNVIALTNAI-KAIRAKHPHLAVLLLSAEEVKGKGKVTV-VTQVSDD 898

Query: 918 --SKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKLR 972
             +  L+ +EW   A+  L G  G GK   A G G+D  ++  A+ LA  F   KL+
Sbjct: 899 LVAAGLKANEW-AGAVAGLLGGKGGGKPQTAQGSGSDLTKIADALSLARSFVNEKLQ 954


>gi|255084804|ref|XP_002504833.1| alanyl-tRNA synthetase [Micromonas sp. RCC299]
 gi|226520102|gb|ACO66091.1| alanyl-tRNA synthetase [Micromonas sp. RCC299]
          Length = 945

 Score =  950 bits (2456), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 508/916 (55%), Positives = 629/916 (68%), Gaps = 49/916 (5%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           EWPA ++R TF  FFE K H    SSPVVP +DPTLLFANAGMNQ+KP FLGTADP   L
Sbjct: 6   EWPAQRIRQTFLDFFEGKEHTVVPSSPVVPHDDPTLLFANAGMNQFKPCFLGTADPKGPL 65

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
           +KL RA +TQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGD+FK EAI WAWELLT
Sbjct: 66  AKLKRATDTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDFFKEEAIGWAWELLT 125

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPC 236
           KVY LP DRLYATYFGGD   GL PD+EA++IWLK+LP  +VLPF CKDNFWEMGD GPC
Sbjct: 126 KVYMLPEDRLYATYFGGDPAQGLPPDDEAKEIWLKYLPPHKVLPFDCKDNFWEMGDVGPC 185

Query: 237 GPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGF 296
           GPC+EIHYDR G RDA+ LVN DDP C+EIWN+VFIQFNRE  G LKPLPAKHVDTG+GF
Sbjct: 186 GPCTEIHYDRIGGRDASDLVNMDDPNCLEIWNVVFIQFNREEGGVLKPLPAKHVDTGMGF 245

Query: 297 ERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRT 356
           ERL SILQ KMSNYDTDVFMPIFDAIQ  TGA PY+GK+GA+D  + DMAYRVVADH+RT
Sbjct: 246 ERLASILQGKMSNYDTDVFMPIFDAIQAVTGAEPYAGKLGAEDVGEKDMAYRVVADHVRT 305

Query: 357 LSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPEL 416
           L+FAIADG+ PG++GR YVLRR+LRRAVR+G E L A+ GFF  LV  VV++ GDVFPE+
Sbjct: 306 LTFAIADGAAPGSDGRNYVLRRVLRRAVRFGREKLGAKQGFFATLVKTVVQLFGDVFPEI 365

Query: 417 KQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK---VLSGQDAFILWDTYGFPL 473
            + E  + EIIA EE SFG+TLLKG+E+FKK A   + +    +SG +AF+LW+++GFP+
Sbjct: 366 VKEEKRVTEIIAEEEESFGRTLLKGVEQFKKIAAKAKEEGRDTVSGAEAFLLWESFGFPV 425

Query: 474 DLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLAT 533
           DL ++M EE G+ VD  GF  A  EA+E+SR+A  K  G  ++ +A+ATA L   GV  T
Sbjct: 426 DLVEIMCEENGMKVDNAGFEEAFKEAQEKSRAAGKKGGGRQLLFEAEATAWLANNGVPLT 485

Query: 534 DDSFKFIWFQDHKSVIKAIYTGSEFIESV--VPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
           DDS K+      ++ +KAI T   F+ES   V G  +G+VL  +SFYAE GGQ+ D G I
Sbjct: 486 DDSHKYAAGSVPEATVKAILTLDGFVESTENVEG-PIGLVLDKTSFYAESGGQVCDVGVI 544

Query: 592 EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHML 651
           +    S  V + ++  GFV+H     +GA   +VG+ V C VDYDRR  I PNHT TH L
Sbjct: 545 KSGSASATVEDTKVAAGFVLHSCDSVDGA--VAVGDAVRCLVDYDRRANIMPNHTMTHCL 602

Query: 652 NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKE 711
           N+ALR VLGD VDQKGS+V  EKLRFDFSH K + P+ + ++E++V +Q+ A+L V ++E
Sbjct: 603 NYALRRVLGDSVDQKGSLVDDEKLRFDFSHSKAMTPDEIEKVEALVRDQVNAKLAVHTRE 662

Query: 712 ATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSN 771
             LA+AK I+GLRAVFGEVYPDPVRVV++G  ++DLL  P +++W   S E CGGTHL+N
Sbjct: 663 VALAKAKEISGLRAVFGEVYPDPVRVVSVGPSIDDLLGAPASEDWKGYSIEFCGGTHLAN 722

Query: 772 TREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKNQV 831
           T +A  F LLSEEGIAKG+RRI   T G A  A + A  L  +V     + G+ LEK   
Sbjct: 723 TSDAADFVLLSEEGIAKGVRRIVGATKGAAAAAMKTAADLAAQVAACDALSGAELEKAMA 782

Query: 832 RKAQKKVAEENLQKAVK---------------------------------VATETAEAAA 858
             A K   + ++  AV+                                 V   T EA A
Sbjct: 783 --ALKGTVDTSVMPAVQRAEIRDAMAKHTKRIAAAMKEAAAAAKANAIAAVEERTTEAKA 840

Query: 859 SNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQS 918
           +    F ++++    D AA+++A     +Q G+   +FS D    KA+    VPE     
Sbjct: 841 AGASVF-VAQLGDFTDPAALKDAAAVAFKQ-GVACALFSKDPIKGKAMCYVSVPE----G 894

Query: 919 KQLEVSEWLTAALQPL 934
             L+V  WL A   P+
Sbjct: 895 VSLDVKGWLAACCGPI 910


>gi|308803402|ref|XP_003079014.1| SYA_ARATH Alanyl-tRNA synthetase, mitochondrial precursor (ISS)
            [Ostreococcus tauri]
 gi|116057467|emb|CAL51894.1| SYA_ARATH Alanyl-tRNA synthetase, mitochondrial precursor (ISS)
            [Ostreococcus tauri]
          Length = 1170

 Score =  948 bits (2450), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 523/954 (54%), Positives = 632/954 (66%), Gaps = 61/954 (6%)

Query: 40   FSASAVAAMPGADPQVVEWPATKVRDTFFKFF-EDKNHVNWKSSPVVPVNDPTLLFANAG 98
            +  S    +P     V EWP+ +VRDTF  +F E +NH  W SSP VPV+DPTLLFANAG
Sbjct: 226  YDPSGDKVLPRPVKYVEEWPSKRVRDTFINYFIEKQNHTPWPSSPAVPVDDPTLLFANAG 285

Query: 99   MNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 158
            MNQYKPIFLG ADP T L+KL+RA NTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS
Sbjct: 286  MNQYKPIFLGKADPKTALAKLSRATNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 345

Query: 159  FGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRV 218
            FGDYFK EAI WAWELLTKVY LP DRLYATYFGGDE  GL PD EA+ IWLK+LP SRV
Sbjct: 346  FGDYFKEEAIGWAWELLTKVYCLPEDRLYATYFGGDESQGLEPDLEAKAIWLKYLPESRV 405

Query: 219  LPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRES 278
            +PFGC DNFWEMGD GPCGPC+EIHYDR G RDA+SLVN DDP C+EIWN+VFIQ+    
Sbjct: 406  MPFGCADNFWEMGDVGPCGPCTEIHYDRIGGRDASSLVNMDDPNCLEIWNVVFIQYT--- 462

Query: 279  DGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGAD 338
                      HVDTG+GFERLTSILQNK SNYDTDVFMPIF  IQ+ TGA PY+G +G  
Sbjct: 463  ----------HVDTGMGFERLTSILQNKPSNYDTDVFMPIFKEIQRITGASPYTGLLGKS 512

Query: 339  DADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFF 398
            D  + DMAYRVVADHIRTL  AIADG+ PG++GR YVLRR+LRRAVR+G E L A+ GFF
Sbjct: 513  DVGEKDMAYRVVADHIRTLCIAIADGAAPGSDGRNYVLRRVLRRAVRFGREKLGAKQGFF 572

Query: 399  NGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKK---AAQDVQGK 455
              LV IVVK +G VFPEL +++ HI EIIA EE SFG+TL KGI +FKK   AA      
Sbjct: 573  AQLVPIVVKQLGYVFPELIEKKKHIVEIIAEEETSFGRTLEKGIAQFKKVLDAATKEGRT 632

Query: 456  VLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAI 515
            V+SG +AF+LW++YGFP DL +LMAEE G  +D EGF  A  EA+E+SR+   K  G  +
Sbjct: 633  VISGPEAFLLWESYGFPNDLVELMAEEVGFTLDNEGFAKAFAEAQEKSRAGGKKSGGVQL 692

Query: 516  VMDADATAALHKRGVLATDDSFKF-IWFQDHKSVIKAIYTGSEFIESVVPG-NEVGIVLA 573
            + +A+ATA L    V  T+DS K+ +    H S + AI T S F++S        G VL 
Sbjct: 693  LFEAEATAWLQNNDVSTTNDSEKYAVGRPSHTSTVAAILTPSGFVKSTADAEGPYGFVLN 752

Query: 574  SSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKV 633
            S++FYAE GGQ+ D G I    GS  V +V++  GFV+H G   E +G  SVGE   C V
Sbjct: 753  STTFYAESGGQVADTGAISTPNGSVSVEDVKVAAGFVLHTG---EVSGTVSVGEAATCAV 809

Query: 634  DYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRI 693
            DY+RR+ I PNHT TH+LN+ALR+V GD VDQKGS+V  EKLRFDFS  K +  + +  I
Sbjct: 810  DYERRENIMPNHTMTHVLNYALRKVAGDGVDQKGSLVDEEKLRFDFSLNKGLTTKQIADI 869

Query: 694  ESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPEN 753
            E++VNEQI A+L V  +E  LA+A  INGLRAVFGEVYPDPVRVV++G  +++LLADP N
Sbjct: 870  EAVVNEQINAKLSVDKREVALAKAMTINGLRAVFGEVYPDPVRVVSVGPSIDELLADPIN 929

Query: 754  KEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEK 813
            ++W++ S E CGGTHL  T  AE F +L E GI+KGIRRITA T G A KA   A  L  
Sbjct: 930  EKWVNYSIEFCGGTHLQTTDFAEQFVVLEETGISKGIRRITAATRGTAKKAIARANELMA 989

Query: 814  EVDDASKIEGSLL--EKNQVRKA-----QKKVAEENLQKA-------------------- 846
             V     + G  L  E N ++ A        VA E +++                     
Sbjct: 990  TVKACDALSGEALNTELNVLKVAIDTGSMPTVAREQIREELNRQIKRLLEAAKEAAAAAK 1049

Query: 847  ----VKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETT 902
                V V  +TA    +  K F  S  +   DA A+REA   +  ++G+   +FS  +  
Sbjct: 1050 AQALVDVQEKTAATKTAGAKYFVASLAD-ETDAGAMREAA-TIAFKEGVACTLFS--KVK 1105

Query: 903  NKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQV 956
             K  V   VP        ++V  WL A+  PL G+ G GK G+A GQG +   V
Sbjct: 1106 GKEFVYVSVP----PDVSIDVKGWLAASCAPLGGKGGGGKNGVAQGQGPNVEAV 1155


>gi|298708166|emb|CBJ30506.1| Alanyl-tRNA Synthetase [Ectocarpus siliculosus]
          Length = 992

 Score =  942 bits (2434), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 492/931 (52%), Positives = 618/931 (66%), Gaps = 63/931 (6%)

Query: 58  WPATKVRDTFFKFFEDK-NHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           WPA++VRD+F  FF +K +H  WKSSPVVP +DPTLLFANAGMNQ+KP+FLGTADP   L
Sbjct: 31  WPASRVRDSFISFFTEKHDHTFWKSSPVVPHDDPTLLFANAGMNQFKPLFLGTADPALPL 90

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
           SKLTRA N+QKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFG YFK EAI +AWE LT
Sbjct: 91  SKLTRATNSQKCIRAGGKHNDLDDVGKDLYHHTFFEMLGNWSFGSYFKEEAIGYAWECLT 150

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPC 236
            VY+L   RLYATYFGGDEK  +  D +A+ IWLK+LP SRVLPF   DNFWEMGD GPC
Sbjct: 151 TVYKLDPSRLYATYFGGDEKLRVGADEDAKKIWLKYLPESRVLPFSLADNFWEMGDVGPC 210

Query: 237 GPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGF 296
           GPC EIHYDR G RDAA  VN D P  IEIWN+VFIQ+NRE+DGSLK LP KH+DTGLGF
Sbjct: 211 GPCVEIHYDRIGGRDAAKDVNMDKPEVIEIWNVVFIQYNRENDGSLKELPNKHIDTGLGF 270

Query: 297 ERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRT 356
           ERL SILQ KMSNYDTDVF+PIF+AI+ ATGARPY+GKVG +D+D +DMAYRVVADHIRT
Sbjct: 271 ERLASILQGKMSNYDTDVFVPIFEAIRSATGARPYTGKVGEEDSDNMDMAYRVVADHIRT 330

Query: 357 LSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPEL 416
           L+ AI DG  P N+GR YVLRR+LRRA+RYG +VL  + GFF+ LV +VV +M  +FPEL
Sbjct: 331 LTIAITDGCTPSNDGRGYVLRRVLRRAIRYGQQVLGGKPGFFHTLVPVVVGLMKGIFPEL 390

Query: 417 KQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDL 475
              EA +  +I  EE SF KTL KG+++F K A  +   KV  G  AF L+ + GFPLDL
Sbjct: 391 VDAEARVTAVIKDEEMSFNKTLDKGLKEFNKVAAALGDSKVFPGTAAFQLYSSMGFPLDL 450

Query: 476 TQLMAEERGLLVDIEGFNNAMDEARERS---RSAQNKQAGGAIVMDADATAALHKRGVLA 532
             LMAEE+GL VD+EGF+  M + + +S   RS Q    G  ++++A+    L KR   A
Sbjct: 451 LTLMAEEKGLSVDVEGFDQKMSDEKTKSNQARSNQKAAGGKPMILEAEQMDWLSKRDTEA 510

Query: 533 TDDSFKFIWFQDHKSVIKAIYTGSEFIES---VVPG----------NEVGIVLASSSFYA 579
           T+ S ++ W Q   + + A++ G    E     VP             VG+VL  +SFYA
Sbjct: 511 TEASGRYTWHQQPAAKVLALFVGKGEGEDGVGFVPSASAVADEADQQTVGVVLDCTSFYA 570

Query: 580 EQGGQIFDEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDR 637
           E GGQI+D G   +    GSF VR V  +G + +HIG +   AG  SVG +V+CKVDY+R
Sbjct: 571 EGGGQIYDIGELSLSDGSGSFAVRQVSSFGAYTLHIGQVK--AGTLSVGSDVVCKVDYER 628

Query: 638 RKLIAPNHTCTHMLNFALREVLGDH---VDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIE 694
           R  +APNHT TH+LNFALR+VL       DQKGS +  EKLRFDFS    +  E +  +E
Sbjct: 629 RANVAPNHTMTHVLNFALRKVLDPSDGMCDQKGSFLDDEKLRFDFSWSGSLTAEQVADVE 688

Query: 695 SIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENK 754
            +VN++I   L V++  A L +A+ I  LR VFGE YPDPVRV++IG+ V  +L DPEN 
Sbjct: 689 DLVNDKINKNLPVYAFVAPLEQAQRIQSLRGVFGERYPDPVRVLSIGQDVPAMLEDPENS 748

Query: 755 EWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKE 814
            W  +S E CGGTHLSNT+EAE F +L E GIAKG+RRI AVT GLA  A E A + E++
Sbjct: 749 AWSDVSVEFCGGTHLSNTQEAETFVILEEAGIAKGVRRIVAVTRGLALAAVERAKAFEQQ 808

Query: 815 VDDASKIEG-------------------SLLEKNQVR--------KA---QKKVAEENLQ 844
           +D A  IE                    S+  KN++R        KA   +KKV EE + 
Sbjct: 809 LDVADGIEDISLDTTVRRLGAELDGAVISVKTKNKLRARLATLVQKAKALKKKVMEERVG 868

Query: 845 KAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMP----VMVFSTDE 900
           +AV V    AE     G    + R + G DA +  + + +V   K  P    +M+F+ DE
Sbjct: 869 QAVTVGKAEAEKTKEAGGTQLVFRADFGCDAKSAVKILAEV--SKACPELTSMMLFTADE 926

Query: 901 TTNKAVVCAGVPEKSDQSKQLEVSEWLTAAL 931
             ++ + C  +P  + ++ + + ++W+  AL
Sbjct: 927 EADRYLCCGLIP--NSKAAKKDTNKWVQCAL 955


>gi|145346253|ref|XP_001417607.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144577834|gb|ABO95900.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 967

 Score =  942 bits (2434), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 471/766 (61%), Positives = 570/766 (74%), Gaps = 9/766 (1%)

Query: 38  SRFSASAVAAMPGADPQVVEWPATKVRDTFFKFF-EDKNHVNWKSSPVVPVNDPTLLFAN 96
           + +  S    +P     V EWP+++VRDTF  +F E + HVNW SSP VPVNDPTLLFAN
Sbjct: 8   ATYDPSGPKELPRPVKYVEEWPSSRVRDTFVNYFIEKQGHVNWPSSPAVPVNDPTLLFAN 67

Query: 97  AGMNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGN 156
           AGMNQYKPIFLG ADP T  +KLTRA NTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGN
Sbjct: 68  AGMNQYKPIFLGKADPKTAFAKLTRATNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGN 127

Query: 157 WSFGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPAS 216
           WSFGDYFK EAI  AW+LLT VY L  DRLYATYFGGDE  GL PD EA+ IWLK+LP S
Sbjct: 128 WSFGDYFKEEAIGMAWDLLTNVYGLAPDRLYATYFGGDESQGLQPDLEAKAIWLKYLPES 187

Query: 217 RVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNR 276
           RV+PFGC DNFWEMGD GPCGPC+EIHYDR G RDAASLVN DDP C+EIWN+VFIQ+NR
Sbjct: 188 RVMPFGCADNFWEMGDVGPCGPCTEIHYDRIGGRDAASLVNMDDPNCLEIWNVVFIQYNR 247

Query: 277 ESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVG 336
           E  G LK LP+KHVDTG+GFERLTSILQNKMSNYDTDVFMPIF  IQ+ +GA PY+G +G
Sbjct: 248 EEGGVLKSLPSKHVDTGMGFERLTSILQNKMSNYDTDVFMPIFKEIQRISGAAPYTGLLG 307

Query: 337 ADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG 396
            +D  + DMAYRVVADHIRTLS AIADG+ PG++GR YVLRR+LRRAVR+G E L A+ G
Sbjct: 308 KEDVGEKDMAYRVVADHIRTLSIAIADGAAPGSDGRNYVLRRVLRRAVRFGREKLGAKQG 367

Query: 397 FFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKK--AAQDVQG 454
           FF+ LV  +++ +G VFPEL  ++ HI EIIA EE SFG+TL KGI++F K  AA   +G
Sbjct: 368 FFHKLVPCLIQQLGAVFPELVAKQTHITEIIADEEESFGRTLQKGIDQFGKVLAAAKQEG 427

Query: 455 K-VLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGG 513
           + V+SG +AF+LW++YGFP DLT+LMAEE G  +D EGF  A  EA+E+SR+   K  G 
Sbjct: 428 RTVISGPEAFLLWESYGFPNDLTELMAEENGFTLDNEGFAQAFAEAQEKSRAGGKKSGGV 487

Query: 514 AIVMDADATAALHKRGVLATDDSFKFIWFQDH-KSVIKAIYTGSEFIESVVPG-NEVGIV 571
            ++ +A+ATA L   GV  T D  K+   +   +S + AI + S FI+S        G  
Sbjct: 488 QLLFEAEATAWLQNNGVAITKDEEKYASGRPTLESTVTAIMSPSGFIKSTSDAEGPYGFF 547

Query: 572 LASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVIC 631
           + +++FYAE GGQ+ D G I    GS  V +V++   +V+H G ++   G  SVG+   C
Sbjct: 548 MDATTFYAESGGQVCDSGLITTPSGSMSVSDVKVAAAYVMHTGDVS---GTVSVGDAAKC 604

Query: 632 KVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLR 691
            VDYDRR  I PNHT TH+LN+ALR+V+GD VDQKGS+V  EKLRFDFSH K    + + 
Sbjct: 605 AVDYDRRDNIMPNHTMTHVLNYALRKVMGDGVDQKGSLVDEEKLRFDFSHNKGATTKQIA 664

Query: 692 RIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADP 751
            IE+IVNEQIK++L V  +E  L +A  INGLRAVFGEVYPDPVRVV++G  ++DLLA+P
Sbjct: 665 EIEAIVNEQIKSKLAVDKREVALDKAMTINGLRAVFGEVYPDPVRVVSVGPSIDDLLANP 724

Query: 752 ENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVT 797
            + +W + S E CGGTHL++T  AE F +L E GIAKGIRRIT  T
Sbjct: 725 SDDKWKNYSIEFCGGTHLASTDFAEQFVILEESGIAKGIRRITGAT 770


>gi|303282971|ref|XP_003060777.1| alanyl-tRNA synthetase [Micromonas pusilla CCMP1545]
 gi|226458248|gb|EEH55546.1| alanyl-tRNA synthetase [Micromonas pusilla CCMP1545]
          Length = 972

 Score =  927 bits (2396), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 499/934 (53%), Positives = 629/934 (67%), Gaps = 62/934 (6%)

Query: 58  WPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLS 117
           WPA K+R TF  FFE K H    SSPVVP +DPTLLFANAGMNQ+K IFLG ADP   L+
Sbjct: 11  WPANKIRQTFLDFFESKEHAVVPSSPVVPHDDPTLLFANAGMNQFKSIFLGKADPKGPLA 70

Query: 118 KLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT- 176
           KL RA +TQKCIRAGGKHNDLDDVGKDTYHHT+FEMLGNWSFGD+FK EAI WAWELLT 
Sbjct: 71  KLKRATDTQKCIRAGGKHNDLDDVGKDTYHHTYFEMLGNWSFGDFFKREAIHWAWELLTS 130

Query: 177 -KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGP 235
            + Y L   RLYA+YFGGDE  GL PD EARDIWL+ LP ++VLPFGC+DNFWEMGD GP
Sbjct: 131 KEHYGLDESRLYASYFGGDESQGLPPDLEARDIWLEVLPPNKVLPFGCEDNFWEMGDVGP 190

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPCSEIHYDR G RDAA LVN DDP C+EIWNIVFIQFNRE  G LKPLPAKHVDTG+G
Sbjct: 191 CGPCSEIHYDRIGGRDAADLVNADDPNCLEIWNIVFIQFNREEGGVLKPLPAKHVDTGMG 250

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
           FER+ SILQ+KMSNYDTDVF PIF+ I++ TGA PY+G +GA+D  + DMAYRVVADHIR
Sbjct: 251 FERIASILQDKMSNYDTDVFTPIFERIREVTGAPPYTGLLGAEDEGEKDMAYRVVADHIR 310

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPE 415
           TL+FAIADG+ PG++GR YVLRR+LRRAVR+G E L A+ GFF  LV +VV++ G VFPE
Sbjct: 311 TLTFAIADGAAPGSDGRNYVLRRVLRRAVRFGREKLGAEQGFFQKLVAVVVELFGHVFPE 370

Query: 416 LKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ---GKVLSGQDAFILWDTYGFP 472
           + + E  + +IIA EE SFG+TLLKGI++FKK A   +   G V+ G  AF+LW+++GFP
Sbjct: 371 IVKHEKRVTDIIADEEESFGRTLLKGIDQFKKIAAKAKEDGGAVVDGAAAFLLWESFGFP 430

Query: 473 LDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRG--- 529
           +DLT++MAEE G+ VD  GF+ A  EA+E+SR+   K  G +++ +A+AT+ L K G   
Sbjct: 431 IDLTEIMAEENGMTVDTAGFDAAFKEAQEKSRAGGKKSDGPSLLFEAEATSWLQKNGSKW 490

Query: 530 ------------VLATDDSFKFIWFQ-DHKSVIKAIYTGSEFIESV--VPGNEVGIVLAS 574
                       +  TDDS K+   + D  +V+KAI T + F+ES   V G  +G+VL  
Sbjct: 491 GKAKDIAHAHDAIPFTDDSPKYDGPEADPSAVVKAILTLNGFVESTEGVEG-PIGLVLDR 549

Query: 575 SSFYAEQGGQIFDEGFIEGLFG-SFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKV 633
           +SFYAE GGQ+ D G I    G S  V  V++  GFV+H G   EG    +VG     +V
Sbjct: 550 TSFYAESGGQVCDVGVITTENGASLAVNEVKVAAGFVLHSGERVEGEA-ITVGNTCAARV 608

Query: 634 DYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRI 693
           DYDRR  IAPNHT TH+LNFALR VLGD VDQKGS+V  EKLRFDFSH KP+    ++R+
Sbjct: 609 DYDRRANIAPNHTMTHVLNFALRSVLGDGVDQKGSLVDDEKLRFDFSHNKPMSNNEIKRV 668

Query: 694 ESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPEN 753
           E IV E++ A L V ++E  LA+AK I+GLRAVFGEVYPDPVRVV++G  +++LLA+P +
Sbjct: 669 EEIVRERVGASLAVDAREVALADAKTISGLRAVFGEVYPDPVRVVSVGPTIDELLANPGS 728

Query: 754 KEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGL------------- 800
           +EW   S E CGGTHL+NT +AE F LL E GIAKGIRR+ A T G              
Sbjct: 729 EEWTKYSIEFCGGTHLANTSQAEGFVLLEEAGIAKGIRRVVAATRGGAVAALATAAGIAA 788

Query: 801 ---AYKAFEAACSLEKEV----DDASKIEGSLLEKNQVRKAQKKVAEENL---------- 843
              A  A      L+KE+    +D        +++ ++R       ++ +          
Sbjct: 789 RVDACDAMPPGPELDKEMAALKNDVDTAVMPAVQRAEIRDRMAATTKKLIAAAKEAAVAV 848

Query: 844 --QKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDET 901
                  V  +TAE  A+ G+   + R+  G D  A+++A     +Q  +   +FS D  
Sbjct: 849 KAAAKKAVEEKTAEVKAA-GETVFVMRLGDGADPGALKDAAAVAFKQD-VACALFSADTV 906

Query: 902 TNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLK 935
             KA+     P  +  +  ++V +WL A   P++
Sbjct: 907 KGKAMCYVSAPPSA--TPAIDVKKWLDACCGPIE 938


>gi|412988532|emb|CCO17868.1| alanyl-tRNA synthetase [Bathycoccus prasinos]
          Length = 1194

 Score =  923 bits (2385), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 506/957 (52%), Positives = 652/957 (68%), Gaps = 53/957 (5%)

Query: 44   AVAAMPGADPQVVEWPATKVRDTFFKFFEDKN-HVNWKSSPVVPVNDPTLLFANAGMNQY 102
            A+  +P    +   W A KVR+TF  FFE K+ H    SSPVVP +DPTLLFANAGMNQ+
Sbjct: 233  ALKNLPIDQTENCSWSAAKVRNTFTSFFESKHAHTIVPSSPVVPHDDPTLLFANAGMNQF 292

Query: 103  KPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDY 162
            KPIFLGT DP + L  L R  ++QKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDY
Sbjct: 293  KPIFLGTCDPKSPLYTLKRVTDSQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDY 352

Query: 163  FKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFG 222
            FK  AI  AWELLT+VY++  DRLYATYFGGD K GL PD EARDIWLKFLPAS+VLPF 
Sbjct: 353  FKEGAISMAWELLTEVYKIDPDRLYATYFGGDPKQGLEPDLEARDIWLKFLPASKVLPFD 412

Query: 223  CKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSL 282
            C DNFWEMGDTGPCGPC+EIH+DR GNRDA+SLVN DDP C+EIWN+VFIQ+NRE  G L
Sbjct: 413  CADNFWEMGDTGPCGPCTEIHFDRIGNRDASSLVNMDDPNCLEIWNLVFIQYNREEGGVL 472

Query: 283  KPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADK 342
            KPLP+KHVDTG+GFERL S LQ++ SNYDTDVF+PIF  IQ+ TG+ PY+G +G  DA +
Sbjct: 473  KPLPSKHVDTGMGFERLASCLQDRPSNYDTDVFLPIFREIQRVTGSSPYTGLLGVADAGE 532

Query: 343  VDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLV 402
             DMAYRVVADH+RTL+ AIADG+ PG++GR YVLRR+LRRAVR+G E L A+ GFF+ LV
Sbjct: 533  KDMAYRVVADHVRTLTVAIADGASPGSDGRNYVLRRVLRRAVRFGREKLNAKQGFFHKLV 592

Query: 403  NIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK---VLSG 459
              VVK++G+ FPE+K+ E  + EIIA EE SFGKTLLKGIEKFKK A+  +G+   V+SG
Sbjct: 593  PTVVKMLGETFPEIKKEEKRVIEIIAEEEESFGKTLLKGIEKFKKIAEGARGENRNVISG 652

Query: 460  QDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDA 519
             +AF+LW+++GFP DLT++M EE GL ++ E F+     A+E+SR +  K  G  ++  A
Sbjct: 653  VEAFLLWESFGFPNDLTEIMCEENGLTLNNEEFDQVFKAAQEKSRMSSKKNTGVDLLFQA 712

Query: 520  DATAALHKRGVLATDDSFKFIW-FQDHKSVIKAIYTGSE-FIESVV-PGNEVGIVLASSS 576
            +ATA L    +  T+DSFK++       + +KAI T S+ F++S        G++L S+ 
Sbjct: 713  EATAWLSNNNIATTNDSFKYVKNVPKVDTTVKAILTSSDGFVQSTEGQSGPFGLILESTP 772

Query: 577  FYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYD 636
            FYAE GGQ+ D G +        V   +   G+++H+  L++ +   SVG+    +VD  
Sbjct: 773  FYAESGGQVSDTGSLNVNGKDLSVSEAKAAAGYILHV--LSDDSVSVSVGDACTAQVDVA 830

Query: 637  RRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESI 696
            RR  I PNHT TH++NFALREVLG+ V+QKGSVV  EKLRFDFSH KPV  + ++  + I
Sbjct: 831  RRSDIMPNHTMTHVVNFALREVLGNDVNQKGSVVDDEKLRFDFSHNKPVTAKQIQEAQDI 890

Query: 697  VNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEW 756
            VN QIK  L V ++E  L +A+ INGLRAVFGEVYPDPVRVV++G  ++DLL++P N+ W
Sbjct: 891  VNSQIKENLSVHTREVALTDAQKINGLRAVFGEVYPDPVRVVSVGPAIDDLLSNPSNEAW 950

Query: 757  LSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVD 816
               S E CGGTHL +T EAE FA++ E G AKGIRRITA T G A +AF+ A      +D
Sbjct: 951  AKRSIEFCGGTHLKSTAEAEDFAIIEEVGTAKGIRRITAATKGQARQAFQNAKDFMDTID 1010

Query: 817  DASKI--------EGSLLEKNQVRKAQKKV---AEENLQKAV------------------ 847
              +KI        + SLL K  +  A+K +   + ENL++ +                  
Sbjct: 1011 ATAKITDLTELSAQLSLL-KGSIDDAEKTMPFASRENLRELIVRENKRYLDEKKKAAAEA 1069

Query: 848  ------KVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDET 901
                  +++    E A+S  + F ++ +  GLDA  + E   + +  KG+   +F+T++ 
Sbjct: 1070 AAKAIEQLSVMCGE-ASSKSENFLVANLGEGLDAKVLGECA-QSVAAKGLSCALFATND- 1126

Query: 902  TNKAVVCAGVPEKSD-QSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVT 957
              KAV    VP  SD ++K  E   WL   L+PL G+ G GK G+A GQG +A  +T
Sbjct: 1127 -GKAVALCSVP--SDVKNKTNEAKNWLDVCLKPLGGK-GGGKKGVAQGQGPNAEAMT 1179


>gi|448098085|ref|XP_004198838.1| Piso0_002228 [Millerozyma farinosa CBS 7064]
 gi|359380260|emb|CCE82501.1| Piso0_002228 [Millerozyma farinosa CBS 7064]
          Length = 960

 Score =  922 bits (2382), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 462/862 (53%), Positives = 587/862 (68%), Gaps = 41/862 (4%)

Query: 58  WPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLS 117
           W A+KVR TF  FF++KNH    SS VVP NDP+LLFANAGMNQYKPIFLGT DP ++ +
Sbjct: 18  WTASKVRSTFLDFFKNKNHTFVPSSSVVPHNDPSLLFANAGMNQYKPIFLGTVDPGSEFA 77

Query: 118 KLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTK 177
            L RA N+QKCIRAGGKHNDL+DVG+D+YHHTFFEMLGNWSFGDYFK +AI WAWELLT+
Sbjct: 78  TLKRAVNSQKCIRAGGKHNDLEDVGRDSYHHTFFEMLGNWSFGDYFKKDAIAWAWELLTE 137

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPC 236
            Y+L  DRLY TYF GDEK GL PD EA+++W K  +P   +LP   KDNFWEMGD GPC
Sbjct: 138 EYKLEKDRLYVTYFEGDEKNGLEPDLEAKELWSKVGVPDDHILPGNAKDNFWEMGDQGPC 197

Query: 237 GPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGF 296
           GPCSEIHYDR G R+AASLVN DDP  IE+WNIVFIQ+NRE+D SL+PLPAKH+DTG+GF
Sbjct: 198 GPCSEIHYDRIGGRNAASLVNEDDPDVIEVWNIVFIQYNREADSSLRPLPAKHIDTGMGF 257

Query: 297 ERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRT 356
           ERL SILQNK SNYDTDVF PIF+ I++ TG RPY+GK G++D D +D AYRV+ADH RT
Sbjct: 258 ERLVSILQNKSSNYDTDVFTPIFNKIREVTGVRPYTGKFGSEDKDGIDTAYRVIADHART 317

Query: 357 LSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFPE 415
           L+FAI+DG  P NEGR YVLRRILRR  RY  + +    G FF  +++++++   D+FPE
Sbjct: 318 LTFAISDGGVPNNEGRGYVLRRILRRGARYVRKYMNYPIGSFFQQIISVIIERNSDIFPE 377

Query: 416 LKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTYGFP 472
           + + +  ++EI+  EE SF KTL +G    E++   A     + LSG+D + L+DTYGFP
Sbjct: 378 ISKYQEELKEILNEEELSFAKTLDRGEKLFEQYAIIASKTPEQTLSGRDVWRLYDTYGFP 437

Query: 473 LDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLA 532
           +DLT+LMAEE G  +D EGF  A  E+RE S+S  +K     I +D  A + L  + +  
Sbjct: 438 VDLTRLMAEEAGTKIDEEGFEKARLESREASKSNTSKSGNQPIKLDVHALSDLDNKQIPK 497

Query: 533 TDDSFKFIWFQDHKSVIKAIYTGSEFIESV-VPGNEVGIVLASSSFYAEQGGQIFDEG-- 589
           TDDS+K+    + K+ I  I+ GS F++++     E GI+L  ++FYAEQGGQ +D G  
Sbjct: 498 TDDSYKY-GLDNVKAKIVEIFDGSSFVDTIDSTEKEYGILLDKTAFYAEQGGQEYDTGNL 556

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
            I+G    F V NVQ+YGG+V+H G++ EG     VG EVI   +  RR  I  NHT TH
Sbjct: 557 VIDGS-AEFNVTNVQVYGGYVLHTGTMVEGI--LKVGNEVIATYNELRRWPIRNNHTGTH 613

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +LNFALREVLGD VDQKGS+V PEKLRFDFSH K V  E LR+IE I N  IK +  VF+
Sbjct: 614 VLNFALREVLGDSVDQKGSLVAPEKLRFDFSHKKAVSTEELRKIEDISNHYIKEDKKVFA 673

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
           K+ +L+EA+ INGLRAVFGE YPDPVRVV+IG  VEDLL DP N +W   S E CGGTH+
Sbjct: 674 KDVSLSEARNINGLRAVFGETYPDPVRVVSIGVPVEDLLKDPSNSQWHKYSIEFCGGTHV 733

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK--------- 820
           S T E +   ++ E GIAKGIRRI AVT   AY+    A   E E+  AS+         
Sbjct: 734 SKTAEIKYLVIIEESGIAKGIRRIVAVTGNEAYEVQRIAADFENELKKASQLPFGEEKQQ 793

Query: 821 -----------IEGSLLEK---NQVRKAQKKVAEENLQKAVKVATETAE------AAASN 860
                      +  S+LEK   N +  +  K  ++ L+   K+ ++          A+ N
Sbjct: 794 RVKEIGVKLKTLSISVLEKQKLNDLFNSLDKSIKDELKSQQKIESKKVLDVVNNWLASEN 853

Query: 861 GKPFCISRVEVGLDAAAVREAV 882
            KP+ +  + +  +A A+ EA+
Sbjct: 854 AKPYYVDYIPINANAKAITEAI 875


>gi|448101964|ref|XP_004199688.1| Piso0_002228 [Millerozyma farinosa CBS 7064]
 gi|359381110|emb|CCE81569.1| Piso0_002228 [Millerozyma farinosa CBS 7064]
          Length = 960

 Score =  919 bits (2374), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 461/867 (53%), Positives = 588/867 (67%), Gaps = 51/867 (5%)

Query: 58  WPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLS 117
           W A+KVR TF  FF++KNH    SS VVP NDP+LLFANAGMNQYKPIFLGT DP+++ +
Sbjct: 18  WTASKVRSTFLDFFKNKNHTFVPSSSVVPHNDPSLLFANAGMNQYKPIFLGTVDPSSEFA 77

Query: 118 KLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTK 177
            L RA N+QKCIRAGGKHNDL+DVG+D+YHHTFFEMLGNWSFGDYFK +AI WAW+LLT+
Sbjct: 78  TLKRAVNSQKCIRAGGKHNDLEDVGRDSYHHTFFEMLGNWSFGDYFKKDAIAWAWKLLTE 137

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPC 236
            Y+L  DRLY TYF GDEK GL PD EA+++WLK  +P   +LP   KDNFWEMGD GPC
Sbjct: 138 EYKLEKDRLYVTYFEGDEKNGLEPDLEAKELWLKVGVPEDHILPGNAKDNFWEMGDQGPC 197

Query: 237 GPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGF 296
           GPCSEIHYDR G R+AASLVN DDP  IE+WNIVFIQ+NRE+D SL+PLPAKH+DTG+GF
Sbjct: 198 GPCSEIHYDRIGGRNAASLVNEDDPDVIEVWNIVFIQYNREADSSLRPLPAKHIDTGMGF 257

Query: 297 ERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRT 356
           ERL SILQNK SNYDTDVF PIF+ I++ TG RPY+GK G++D D +D AYRV+ADH RT
Sbjct: 258 ERLVSILQNKSSNYDTDVFTPIFNKIREVTGVRPYTGKFGSEDKDGIDTAYRVIADHART 317

Query: 357 LSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFPE 415
           L+FAI+DG  P NEGR YVLRRILRR  RY  + +    G FF  ++ ++++   D+FPE
Sbjct: 318 LTFAISDGGVPNNEGRGYVLRRILRRGARYVRKYMNYPIGSFFQQIIPVIIERNSDIFPE 377

Query: 416 LKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTYGFP 472
           + + +  ++EI+  EE SF KTL +G    E++   A     + LSG+D + L+DTYGFP
Sbjct: 378 ISKYQEELKEILNEEELSFAKTLDRGEKLFEQYAIIASKTPEQTLSGRDVWRLYDTYGFP 437

Query: 473 LDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLA 532
           +DLT+LMAEE G  +D EGF  A  E+RE S+S  +K     + +D  A + L  + +  
Sbjct: 438 VDLTRLMAEEAGTKIDEEGFEKARLESREASKSNNSKSGNQPMKLDVHALSDLDNKQIPK 497

Query: 533 TDDSFKFIWFQDHKSVIKAIYTGSEFIESV-VPGNEVGIVLASSSFYAEQGGQIFDEG-- 589
           TDDS+K+    + K+ I  I+ GS F++++     E GI+L  ++FYAEQGGQ +D G  
Sbjct: 498 TDDSYKY-GLDNVKAKIVEIFDGSGFVDTIDSTEKEYGILLDKTAFYAEQGGQEYDTGKL 556

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
            I+G    F V NVQ+YGG+V+H G+L EG+    VG EVI   +  RR  I  NHT TH
Sbjct: 557 VIDGS-AEFNVTNVQVYGGYVLHTGTLVEGS--LKVGNEVIATYNELRRWPIRNNHTGTH 613

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +LNFALREVLGD VDQKGS+V PEKLRFDFSH K V  E L +IE I N  IK +  VF+
Sbjct: 614 VLNFALREVLGDSVDQKGSLVAPEKLRFDFSHKKAVTTEELNKIEDISNHYIKEDKKVFA 673

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
           K+ +L+EA+ INGLRAVFGE YPDPVRVV+IG  VEDLL DP N +W   S E CGGTH+
Sbjct: 674 KDVSLSEARSINGLRAVFGETYPDPVRVVSIGVPVEDLLKDPSNSQWHKYSIEFCGGTHV 733

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK--------- 820
           + T E +   ++ E GIAKGIRRI AVT   AY+    A   E E+  AS+         
Sbjct: 734 AKTAEIKHLVIIEESGIAKGIRRIVAVTGNEAYEVQRVAADFEDELKKASELPFGEVKQQ 793

Query: 821 -----------IEGSLLEKNQVR--------------KAQKKVAEENLQKAVKVATETAE 855
                      +  S+LEK ++               K+Q+K+  + +  AV        
Sbjct: 794 KAKELGVKLKTLSISVLEKQKLNELFNSLDKSIKDEIKSQQKLESKKVLDAV-----NDW 848

Query: 856 AAASNGKPFCISRVEVGLDAAAVREAV 882
            A+ N KP+ +  + +  +A A+ EA+
Sbjct: 849 LASENAKPYYVDYIPISANAKAITEAI 875


>gi|328874134|gb|EGG22500.1| alanyl-tRNA synthetase [Dictyostelium fasciculatum]
          Length = 961

 Score =  918 bits (2373), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 482/956 (50%), Positives = 629/956 (65%), Gaps = 55/956 (5%)

Query: 62  KVRDTFFKFFEDK-NHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLT 120
           ++R TF  FF +K  H    SS V+P +DPTLLFANAGMNQ+KPIFLG ADP ++ +KL 
Sbjct: 6   EIRKTFIDFFSEKCQHTFVPSSSVIPHDDPTLLFANAGMNQFKPIFLGQADPRSEQAKLK 65

Query: 121 RACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYR 180
           RA N+QKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK EAI WAWELLT VY+
Sbjct: 66  RAVNSQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAITWAWELLTVVYK 125

Query: 181 LPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPCS 240
           L  +RLYA+YFGGD   GL  D EARD+WL+FLPA RVLPFG K+NFWEMGDTGPCGPCS
Sbjct: 126 LDKERLYASYFGGDAAKGLEADTEARDLWLQFLPAERVLPFGMKENFWEMGDTGPCGPCS 185

Query: 241 EIHYDRT-GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERL 299
           EIH+D+  G + AA+LVN DDPT IEIWN VFIQ+NRE+D SL+PLP KHVDTG+G ERL
Sbjct: 186 EIHFDKVEGRKGAAALVNADDPTLIEIWNNVFIQYNREADKSLRPLPNKHVDTGMGLERL 245

Query: 300 TSILQNKMSNYDTDVFMPIFDAIQQATG-ARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           TSI+QN  +NYDTD+FMPIF  IQ+ TG   PY GKVG+DD ++VDMAYRV+ADHIRTLS
Sbjct: 246 TSIIQNVGTNYDTDIFMPIFAEIQKVTGYPHPYGGKVGSDDPEQVDMAYRVIADHIRTLS 305

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
           F+IADG+ P +EGR  VLRRILRRAVRYG + L A  GFF  LV+IVV+  GD FPEL+ 
Sbjct: 306 FSIADGAVPSSEGRGQVLRRILRRAVRYGKQKLNAPSGFFAKLVDIVVQNFGDFFPELRN 365

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ---GKVLSGQDAFILWDTYGFPLDL 475
           R  HI  ++  EE  F + L +GI +F +    V+    KV    +A+ L+ ++GFP+DL
Sbjct: 366 RPQHIVSVLEREEKMFARALDRGIVEFDRMVDKVKQQGSKVFPASNAWYLYSSFGFPIDL 425

Query: 476 TQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDD 535
           T+LM +E+GL +D++G+    DE  ER R  Q +     + M A+  + L   GV  T D
Sbjct: 426 TKLMVDEKGLELDMDGYQKLADEDAERGRLRQ-RSKKTEMNMQAEPISILQGDGVKPTID 484

Query: 536 SFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEV-----GIVLASSSFYAEQGGQIFDEGF 590
           S K+   ++ ++V+KAIY G  F+ S+   +       GIVL S++FY EQGGQI+D G 
Sbjct: 485 SHKYEQ-KEIETVVKAIYDGKVFVNSLESTDTTRNTVYGIVLESTNFYPEQGGQIYDIGN 543

Query: 591 IEGLFGS---FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTC 647
           I  +      F V + +++GG+V+HIG +T  A    VG++V   VDY RR  I  NHT 
Sbjct: 544 INSVVDQTTIFNVSDCKVFGGYVVHIGYITADAAAIKVGDKVELTVDYTRRSPIMSNHTS 603

Query: 648 THMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDV 707
           THM+NFALR VLGD+V+Q+GS+V   KLRFDFS+ + +  + + +++ IVN+ I  EL V
Sbjct: 604 THMINFALRNVLGDNVEQRGSLVDDSKLRFDFSNDRGMTRQEIIKVDQIVNDLIAKELPV 663

Query: 708 FSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGT 767
             KE  LA AK INGLRAVFGEVYPDPVRVV++G+ V++LLA+P N EW   S E CGGT
Sbjct: 664 SCKEVDLARAKTINGLRAVFGEVYPDPVRVVSVGKSVDELLANPTNPEWTQYSIEFCGGT 723

Query: 768 HLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEG---- 823
           H++N+++AE FA+ SEE +A GIRR+ AVT   A   FE    L+    +A+K  G    
Sbjct: 724 HINNSKDAEYFAITSEEALAAGIRRVVAVTGSDATVVFENNKKLQARFQEATKFTGKELK 783

Query: 824 -------SLLEKNQ--------------------VRKAQKKVAEENLQKAVKV-ATETAE 855
                  +LL ++Q                    + K Q K  E NL K  +V   + + 
Sbjct: 784 DAIPTLTALLNEHQGKISASKKFELVEILSSIQELAKKQYKEEEANLIKEAQVLVDQISN 843

Query: 856 AAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMP---VMVFSTDETTNKAVVCAGVP 912
               +  P  +  +  GL    + +++  +  QK  P   V++ S DE   K  V + VP
Sbjct: 844 QLVESKSPIYVGTINAGLSNTLMSDSIKSI--QKKCPDTSVLLISKDEEKGKICVISIVP 901

Query: 913 EKSD-QSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFA 967
           + S  ++K L+ ++W+      L G+ G     +A G GTD A++  A++ A  FA
Sbjct: 902 KGSTAETKGLKANDWVVKVSAALGGKGGGKP-DVAQGAGTDIAKIDEALEFAKSFA 956


>gi|452825581|gb|EME32577.1| alanyl-tRNA synthetase [Galdieria sulphuraria]
          Length = 961

 Score =  916 bits (2367), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 476/952 (50%), Positives = 629/952 (66%), Gaps = 57/952 (5%)

Query: 58  WPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLS 117
           W + +VR +F  FF  K HV + SSPV+P  DPTLLF NAGMNQ+KP+FLGT DP + LS
Sbjct: 2   WSSVQVRRSFIDFFVQKEHVFYPSSPVIPFEDPTLLFINAGMNQFKPVFLGTVDPTSPLS 61

Query: 118 KLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTK 177
           KL RACN+QKCIRAGGKHNDL+DVGKDTYHHTFFEMLGNWSFGDYFK EAI WA ELLT+
Sbjct: 62  KLKRACNSQKCIRAGGKHNDLEDVGKDTYHHTFFEMLGNWSFGDYFKEEAIAWAMELLTQ 121

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCG 237
           V+ LP +R+YATYFGG ++  L PD EA++IWLK+LP  RVLPFG KDNFWEMGD GPCG
Sbjct: 122 VFGLPKERMYATYFGGSKEWKLEPDWEAKNIWLKYLPEDRVLPFGAKDNFWEMGDVGPCG 181

Query: 238 PCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFE 297
           PCSEIH+DR GNR+AA LVN DDP+ IEIWN+VFIQFNRE+DG+LK LP KH+DTG+GFE
Sbjct: 182 PCSEIHFDRLGNRNAAELVNKDDPSVIEIWNLVFIQFNRETDGTLKLLPNKHIDTGMGFE 241

Query: 298 RLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTL 357
           R+ SILQ   SNYDTDVF  +F AIQ+ TG R Y+G +G+ D D VD AYRVVADH+RTL
Sbjct: 242 RVVSILQGVGSNYDTDVFSGLFLAIQEKTGCRRYTGTIGSQDKDMVDTAYRVVADHVRTL 301

Query: 358 SFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELK 417
           +FAI DG+ P N  R YVLRRILRRAVRY  + L A+ G  + LV++VV+ M D FPEL+
Sbjct: 302 TFAITDGAVPSNNDRGYVLRRILRRAVRYAQQFLGAKTGLISSLVDVVVEQMKDAFPELQ 361

Query: 418 QREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK---VLSGQDAFILWDTYGFPLD 474
           QR   ++++I  EE SFG+TLLKGIE F K A  ++ +   ++ GQD F L+DT GFPLD
Sbjct: 362 QRVDFVKQVILEEEESFGRTLLKGIEAFNKLASHLENEGKTIVPGQDVFFLYDTMGFPLD 421

Query: 475 LTQLMAEERGLLVDIEGFNNAMDEARERSRSAQ--NKQAGGAIVMDADATAALHKRGVLA 532
           LT++MA ERGL VD+ GF+ A++ AR+ SR+ +  N+    ++ + AD    L K G++ 
Sbjct: 422 LTEVMARERGLKVDVRGFDEALENARKISRADRFSNEVGSKSLQLGADEIFHLQKNGIMP 481

Query: 533 TDDSFKFIWFQDHKSVIKAIYTGSEFIES--------VVPGNE-VGIVLASSSFYAEQGG 583
           + D  K+ WF+   S I A++ G  F  S           G + +G+VL  ++FYAE GG
Sbjct: 482 SVDEAKYRWFESLSSFIVALFDGKHFQTSFHHNRAKDTQDGEQYLGVVLKETNFYAEAGG 541

Query: 584 QIFDEGFI------EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDR 637
           Q+ D G +          G F V +VQ YGG+++H G L+   G  SVG++++C+VDY R
Sbjct: 542 QVADTGTVLIKKDGGATSGEFVVTDVQSYGGYILHAGYLS--WGNMSVGDQIVCQVDYQR 599

Query: 638 RKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIV 697
           R+ IAPNHT TH+LNFALR++ G   DQ+GS+V P KLRFDF+  + +  + L+ ++ IV
Sbjct: 600 RQKIAPNHTMTHVLNFALRKIFGPTCDQRGSLVDPNKLRFDFAANRGMSRDDLKLVDEIV 659

Query: 698 NEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWL 757
             +I+  L V SK A LA A  I  LRA+F E YPDPVR+VA+G  ++++L DPEN+ W 
Sbjct: 660 QAKIEEALPVVSKVAPLASAMSIRSLRAIFNEQYPDPVRIVAVGGNIDEMLRDPENEMWY 719

Query: 758 SISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV-- 815
             S ELCGGTH+SNT+ AEAF  + E G+AKGIRRI A+T   A +A   A  L+ EV  
Sbjct: 720 DYSVELCGGTHISNTKVAEAFVTIEEGGVAKGIRRIVALTGKAAKQAIIDAQKLQDEVNL 779

Query: 816 ----------DDASKIEGS-------LLEKNQVRK----AQKKVAEENLQKAVKVATETA 854
                     ++ SK+          LL K   ++      K++ ++  ++  KV  E  
Sbjct: 780 LQELPVDELNEELSKVGQRVDTALIPLLSKQHFKEQLQQLNKQLLQKKKEQQAKVEKEVM 839

Query: 855 E----AAASNGKPFCISRVEVGLDAAAVREAVLKV-IEQKGMPVMVFSTDETTNKAVVCA 909
           E    +  +  K F +   E+  DA  + + +  V      + + + S D+   + VV A
Sbjct: 840 ERIDKSIHNRNKIFVLVLEEIQGDAKVLSKLLSSVKTNYPQVSICLISADDKKRRLVVSA 899

Query: 910 GV-PEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQ---GTDAAQVT 957
            V P+   Q   L   +W+ AAL+ L G+ G GK   A GQ   G++ ++V 
Sbjct: 900 LVCPQHISQG--LFAKDWVEAALKELDGK-GGGKDDQAQGQAKVGSEKSEVV 948


>gi|238883003|gb|EEQ46641.1| alanyl-tRNA synthetase [Candida albicans WO-1]
          Length = 969

 Score =  912 bits (2358), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 476/978 (48%), Positives = 633/978 (64%), Gaps = 53/978 (5%)

Query: 35  SLISRFSASAVAAMPGADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLF 94
           +L+ R S++     P        W A+KVR TF  +F+ + H    SS VVP NDPTLLF
Sbjct: 4   TLLRRMSSNTTIPTPNGSNH---WTASKVRSTFLDYFKKQQHTYVPSSSVVPHNDPTLLF 60

Query: 95  ANAGMNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEML 154
           ANAGMNQYKPIFLGT DP +  + L RA N+QKCIRAGGKHNDL+DVG+D+YHHTFFEML
Sbjct: 61  ANAGMNQYKPIFLGTVDPASDFASLKRAANSQKCIRAGGKHNDLEDVGRDSYHHTFFEML 120

Query: 155 GNWSFGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-L 213
           GNWSFGDYFK EAI+++WELLTKVY L  DRLY TYFGGDEK GL PD EA++ WLK  +
Sbjct: 121 GNWSFGDYFKKEAIDYSWELLTKVYGLQEDRLYVTYFGGDEKQGLEPDLEAKNFWLKVGV 180

Query: 214 PASRVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQ 273
           P   +LP   +DNFWEMGD GPCGPCSEIHYDR G R+A++LVN DDP  +E+WN+VFIQ
Sbjct: 181 PEDHILPGSVEDNFWEMGDQGPCGPCSEIHYDRIGGRNASALVNMDDPNVLEVWNVVFIQ 240

Query: 274 FNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSG 333
           +NRE+DG+L+ LP KH+DTG+GFERL SILQNK SNYDTDVF+PIFD I++ TG RPY+G
Sbjct: 241 YNREADGNLRTLPNKHIDTGMGFERLVSILQNKYSNYDTDVFLPIFDKIREITGVRPYTG 300

Query: 334 KVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKA 393
           K G +D D +D AYRV+ADH+RTL+FAI DG  P NEGR YVLRRILRR  RY  + +  
Sbjct: 301 KFGNEDKDGIDTAYRVIADHVRTLTFAICDGGVPNNEGRGYVLRRILRRGSRYVRKYMNY 360

Query: 394 Q-DGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAA 449
              GFF  LV++V++   ++FPE+      ++EI+  EE SF KTL +G    E++   A
Sbjct: 361 PIGGFFQQLVDVVIEQNKEIFPEISSGAQDLKEILNEEELSFAKTLDRGEKLFEQYAIIA 420

Query: 450 QDVQGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNK 509
                + LSG+D + L+DTYGFP+DLT+LMAEE GL +D EGF  A +E+RE S+ +  K
Sbjct: 421 SKTPEQTLSGKDVWRLYDTYGFPVDLTRLMAEEAGLKIDEEGFERAKEESREASKGSGTK 480

Query: 510 QAGGAIVMDADATAALHKRGVL-ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVV-PGNE 567
                + +D  A + L +   +  T+D FK+   ++ K+ +  IY GS+F++S+  P  +
Sbjct: 481 DGKTLVKLDVHALSELDQNDAIPKTNDEFKY-GLENVKAKVVGIYDGSKFVDSIEDPSIQ 539

Query: 568 VGIVLASSSFYAEQGGQIFDEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSV 625
            GI+L  + FYAEQGGQ +D G   I+G    F V NVQ+Y G+V+H G++ +  G+ +V
Sbjct: 540 YGILLDKTPFYAEQGGQEYDTGKLVIDGK-SEFNVANVQVYAGYVLHTGNIVD--GKLNV 596

Query: 626 GEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPV 685
           G+E+I   D  RR  I  NHT TH+LNFALREVLGD VDQKGS+V PEKLRFDFSH + V
Sbjct: 597 GDEIIATYDELRRWPIRNNHTGTHILNFALREVLGDGVDQKGSLVAPEKLRFDFSHKQAV 656

Query: 686 DPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVE 745
             + L +IE+I N+ IK    V+ K+ +L +AK INGLRAVFGE YPDPVRVV+IG  V+
Sbjct: 657 TAKELEKIEAISNKYIKNNDKVYYKDVSLTKAKEINGLRAVFGETYPDPVRVVSIGVSVD 716

Query: 746 DLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAF 805
           DLLADP N +W  IS E CGGTH++ T + +   ++ E GIAKGIRRI AVT   A+   
Sbjct: 717 DLLADPTNTKWHEISIEFCGGTHVAKTGDIKDLVIIEESGIAKGIRRIVAVTGHDAHHVQ 776

Query: 806 EAACSLEKEVDDAS--------------------KIEGSLLEKNQVRKAQKKV---AEEN 842
           + A   E+E+D+AS                    K+  S+L+K ++ +   K+    ++N
Sbjct: 777 KVANEFEQEIDNASSLPFGVAKESKSKELGVALKKLSISVLDKQRLTEKFNKLDKSIKDN 836

Query: 843 LQKAVKVATETAEAAAS-------NGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMV 895
           L+   K  T+      +       N   F ++ V +  +A A+ EA+  + +Q     + 
Sbjct: 837 LKAKQKEETKKTLDVVNNWLNDKENASSFLVAHVPITANAKAITEAINLIKKQDKTKSIY 896

Query: 896 FSTDETTNKAVVCAGVPEKSDQS--KQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDA 953
             T ET   A  C      SD++  K +  +E   A  + + G+ G GKG +  G G   
Sbjct: 897 LLTGETDKVAHGCY----VSDEAIVKGINANELAKAVSENIGGKAG-GKGNIVQGMGDKP 951

Query: 954 AQVTPAMDLAAEFAAMKL 971
             +  A++   +    KL
Sbjct: 952 QGINTAIEEVTKLFKEKL 969


>gi|68475751|ref|XP_718082.1| hypothetical protein CaO19.5746 [Candida albicans SC5314]
 gi|68475886|ref|XP_718016.1| hypothetical protein CaO19.13169 [Candida albicans SC5314]
 gi|74586350|sp|Q5A8K2.1|SYA_CANAL RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS; Flags: Precursor
 gi|46439761|gb|EAK99075.1| hypothetical protein CaO19.13169 [Candida albicans SC5314]
 gi|46439836|gb|EAK99149.1| hypothetical protein CaO19.5746 [Candida albicans SC5314]
          Length = 969

 Score =  912 bits (2357), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 475/976 (48%), Positives = 631/976 (64%), Gaps = 49/976 (5%)

Query: 35  SLISRFSASAVAAMPGADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLF 94
           +L+ R S++     P        W A+KVR TF  +F+ + H    SS VVP NDPTLLF
Sbjct: 4   TLLRRMSSNTTIPTPNGSNH---WTASKVRSTFLDYFKKQQHTYVPSSSVVPHNDPTLLF 60

Query: 95  ANAGMNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEML 154
           ANAGMNQYKPIFLGT DP +  + L RA N+QKCIRAGGKHNDL+DVG+D+YHHTFFEML
Sbjct: 61  ANAGMNQYKPIFLGTVDPASDFASLKRAANSQKCIRAGGKHNDLEDVGRDSYHHTFFEML 120

Query: 155 GNWSFGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-L 213
           GNWSFGDYFK EAI+++WELLTKVY L  DRLY TYFGGDEK GL PD EA++ WLK  +
Sbjct: 121 GNWSFGDYFKKEAIDYSWELLTKVYGLQEDRLYVTYFGGDEKQGLEPDLEAKNFWLKVGV 180

Query: 214 PASRVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQ 273
           P   +LP   +DNFWEMGD GPCGPCSEIHYDR G R+A++LVN DDP  +E+WN+VFIQ
Sbjct: 181 PEDHILPGSVEDNFWEMGDQGPCGPCSEIHYDRIGGRNASALVNMDDPNVLEVWNVVFIQ 240

Query: 274 FNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSG 333
           +NRE+DG+L+ LP KH+DTG+GFERL SILQNK SNYDTDVF+PIFD I++ TG RPY+G
Sbjct: 241 YNREADGNLRTLPNKHIDTGMGFERLVSILQNKYSNYDTDVFLPIFDKIREITGVRPYTG 300

Query: 334 KVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKA 393
           K G +D D +D AYRV+ADH+RTL+FAI DG  P NEGR YVLRRILRR  RY  + +  
Sbjct: 301 KFGNEDKDGIDTAYRVIADHVRTLTFAICDGGVPNNEGRGYVLRRILRRGSRYVRKYMNY 360

Query: 394 Q-DGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAA 449
              GFF  LV++V++   ++FPE+      ++EI+  EE SF KTL +G    E++   A
Sbjct: 361 PIGGFFQQLVDVVIEQNKEIFPEISSGAQDLKEILNEEELSFAKTLDRGEKLFEQYAIIA 420

Query: 450 QDVQGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNK 509
                + LSG+D + L+DTYGFP+DLT+LMAEE GL +D EGF  A +E+RE S+ +  K
Sbjct: 421 SKTPEQTLSGKDVWRLYDTYGFPVDLTRLMAEEAGLKIDEEGFERAKEESREASKGSGTK 480

Query: 510 QAGGAIVMDADATAALHKRGVL-ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVV-PGNE 567
                + +D  A + L +   +  T+D FK+   ++ K+ +  IY GS+F++S+  P  +
Sbjct: 481 DGKTLVKLDVHALSELDQNDAIPKTNDEFKY-GLENVKAKVVGIYDGSKFVDSIEDPSIQ 539

Query: 568 VGIVLASSSFYAEQGGQIFDEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSV 625
            GI+L  + FYAEQGGQ +D G   I+G    F V NVQ+Y G+V+H G++ +  G+ +V
Sbjct: 540 YGILLDKTPFYAEQGGQEYDTGKLVIDGK-SEFNVANVQVYAGYVLHTGNIVD--GKLNV 596

Query: 626 GEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPV 685
           G+E+I   D  RR  I  NHT TH+LNFALREVLGD VDQKGS+V PEKLRFDFSH + V
Sbjct: 597 GDEIIATYDELRRWPIRNNHTGTHILNFALREVLGDGVDQKGSLVAPEKLRFDFSHKQAV 656

Query: 686 DPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVE 745
             + L +IE+I N+ IK    V+ K+ +L +AK INGLRAVFGE YPDPVRVV+IG  V+
Sbjct: 657 TAKELEKIEAISNKYIKNNDKVYYKDVSLTKAKEINGLRAVFGETYPDPVRVVSIGVSVD 716

Query: 746 DLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAF 805
           DLLADP N +W  IS E CGGTH++ T + +   ++ E GIAKGIRRI AVT   A+   
Sbjct: 717 DLLADPTNTKWHEISIEFCGGTHVAKTGDIKDLVIIEESGIAKGIRRIVAVTGHDAHHVQ 776

Query: 806 EAACSLEKEVDDAS--------------------KIEGSLLEKNQVRKAQKKV---AEEN 842
           + A   E+E+D+AS                    K+  S+L+K ++ +   K+    ++N
Sbjct: 777 KVANEFEQEIDNASSLPFGVAKESKSKELGVALKKLSISVLDKQRLTEKFNKLDKSIKDN 836

Query: 843 LQKAVKVATETAEAAAS-------NGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMV 895
           L+   K  T+      +       N   F ++ V +  +A A+ EA+  + +Q     + 
Sbjct: 837 LKAKQKEETKKTLDVVNNWLNDKENASSFLVAHVPITANAKAITEAINLIKKQDKTKSIY 896

Query: 896 FSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQ 955
             T ET   A  C    E    +K +  +E   A  + + G+ G GKG +  G G     
Sbjct: 897 LLTGETDKVAHGCYVSDEAI--AKGINANELAKAVSENIGGKAG-GKGNIVQGMGDKPQG 953

Query: 956 VTPAMDLAAEFAAMKL 971
           +  A++   +    KL
Sbjct: 954 INTAIEEVTKLFKEKL 969


>gi|241956830|ref|XP_002421135.1| alanyl-tRNA synthetase, putative [Candida dubliniensis CD36]
 gi|223644478|emb|CAX41294.1| alanyl-tRNA synthetase, putative [Candida dubliniensis CD36]
          Length = 969

 Score =  911 bits (2355), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 476/976 (48%), Positives = 629/976 (64%), Gaps = 49/976 (5%)

Query: 35  SLISRFSASAVAAMPGADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLF 94
           +L  R S++     P        W A+KVR TF  +F+ + H    SS VVP NDPTLLF
Sbjct: 4   TLFRRMSSNTTIPTPNGSNH---WTASKVRSTFLDYFKQQQHTYVPSSSVVPHNDPTLLF 60

Query: 95  ANAGMNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEML 154
           ANAGMNQYKPIFLGT DP +  + L RA N+QKCIRAGGKHNDL+DVG+D+YHHTFFEML
Sbjct: 61  ANAGMNQYKPIFLGTVDPASDFASLKRAANSQKCIRAGGKHNDLEDVGRDSYHHTFFEML 120

Query: 155 GNWSFGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-L 213
           GNWSFGDYFK EAI+++WELLTKVY L  DRLY TYFGGDEK GL PD EA++ WLK  +
Sbjct: 121 GNWSFGDYFKKEAIDYSWELLTKVYGLKEDRLYVTYFGGDEKQGLEPDLEAKNFWLKVGV 180

Query: 214 PASRVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQ 273
           P   +LP   KDNFWEMGD GPCGPCSEIHYDR G R+A+ LVN DDP  IE+WN+VFIQ
Sbjct: 181 PEDHILPGSVKDNFWEMGDQGPCGPCSEIHYDRIGGRNASDLVNMDDPNVIEVWNVVFIQ 240

Query: 274 FNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSG 333
           +NRE+DG+L+ LP KH+DTG+GFERL SILQNK SNYDTDVF+PIFD I++ TG RPY+G
Sbjct: 241 YNREADGNLRTLPNKHIDTGMGFERLVSILQNKFSNYDTDVFLPIFDKIREITGVRPYTG 300

Query: 334 KVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKA 393
           K G +D D +D AYRV+ADH+RTL+FAI DG  P NEGR YVLRRILRR  RY  + +  
Sbjct: 301 KFGNEDKDGIDTAYRVIADHVRTLTFAICDGGVPNNEGRGYVLRRILRRGSRYVRKYMNY 360

Query: 394 Q-DGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAA 449
              GFF  LV++V++   ++FPE+      ++EI+  EE SF KTL +G    E++   A
Sbjct: 361 PIGGFFQQLVDVVIEQNKEIFPEISSGAQDLKEILNEEELSFAKTLDRGEKLFEQYAIIA 420

Query: 450 QDVQGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNK 509
                + LSG+D + L+DTYGFP+DLT+LMAEE GL +D +GF  A +E+RE S+ +  K
Sbjct: 421 SKTPEQTLSGKDVWRLYDTYGFPVDLTRLMAEEAGLKIDEDGFERAKEESREASKGSGTK 480

Query: 510 QAGGAIVMDADATAALHKRGVL-ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVV-PGNE 567
                + +D  A + L +   +  T+D FK+   ++ K+ +  IY GS+F+ES+  P  +
Sbjct: 481 DGKTLVKLDVHALSELDQNDTIPKTNDEFKY-GLENVKAKVVGIYDGSKFVESIEDPSIQ 539

Query: 568 VGIVLASSSFYAEQGGQIFDEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSV 625
            GI+L  + FYAEQGGQ +D G   I+G    F V NVQ+Y G+V+H G++ +  G+ +V
Sbjct: 540 YGILLDKTPFYAEQGGQEYDTGKLVIDGK-SEFNVANVQVYAGYVLHTGNIVD--GKLNV 596

Query: 626 GEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPV 685
           G+E+I   D  RR  I  NHT TH+LNFALREVLGD VDQKGS+V PEKLRFDFS+ + V
Sbjct: 597 GDEIIATYDELRRWPIRNNHTGTHILNFALREVLGDGVDQKGSLVAPEKLRFDFSYKQAV 656

Query: 686 DPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVE 745
            P+ L +IE+I N+ IK    V+ K+ +L +AK INGLRAVFGE YPDPVRVV+IG  V+
Sbjct: 657 TPKELEKIEAISNKYIKNNDKVYYKDVSLTKAKEINGLRAVFGETYPDPVRVVSIGVSVD 716

Query: 746 DLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAF 805
           DLLADP N +W  IS E CGGTH++ T + +   ++ E GIAKGIRRI AVT   A+   
Sbjct: 717 DLLADPTNAKWHEISIEFCGGTHVAKTGDIKDLVIVEESGIAKGIRRIVAVTGHDAHHVQ 776

Query: 806 EAACSLEKEVDDAS--------------------KIEGSLLEKNQVRKAQKKV---AEEN 842
           + A   E+E+D A+                    K+  S+L+K ++ +   K+    ++N
Sbjct: 777 KVANEFEQEIDAAASLPFGVVKESKSKELGVALKKLSISVLDKQRLTEKFNKLDKSIKDN 836

Query: 843 LQKAVKVATETAEAAASNG-------KPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMV 895
           L+   K  T+      +N          F +S V +  +A A+ EA+  + +Q     + 
Sbjct: 837 LKARQKEETKKTLDVVNNWLNDKENVSSFLVSHVPITANAKAITEAINLIKKQDKSKSIY 896

Query: 896 FSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQ 955
             T ET   A  C    E    +K +  +E   +  + + G+ G GKG +  G G     
Sbjct: 897 LLTGETDKVAHGCYVSDEAI--AKGINANELAKSVSENIGGKAG-GKGNIVQGMGDKPEG 953

Query: 956 VTPAMDLAAEFAAMKL 971
           +  A++   +    KL
Sbjct: 954 INTAIEEVTKLFKEKL 969


>gi|330794423|ref|XP_003285278.1| alanyl-tRNA synthetase [Dictyostelium purpureum]
 gi|325084730|gb|EGC38151.1| alanyl-tRNA synthetase [Dictyostelium purpureum]
          Length = 944

 Score =  910 bits (2352), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 468/942 (49%), Positives = 628/942 (66%), Gaps = 39/942 (4%)

Query: 62  KVRDTFFKFFEDK-NHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLT 120
           ++R TF +FF +K  H    SS V+P +DPTLLFANAGMNQ+KPIFLG  +P ++ +KL 
Sbjct: 5   QIRKTFIEFFVNKAEHTFVPSSAVIPHDDPTLLFANAGMNQFKPIFLGQVNPKSEQAKLK 64

Query: 121 RACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYR 180
           RA N+QKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFG+YFK EAI WAWELLT+VY 
Sbjct: 65  RAVNSQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGNYFKKEAISWAWELLTEVYG 124

Query: 181 LPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPCS 240
           L  +RLY TYF GD + GL PDNEA+++WL++LP  RVLPFG K+NFWEMGD GPCGPCS
Sbjct: 125 LDKERLYVTYFRGDPEKGLEPDNEAKNLWLQYLPEERVLPFGMKENFWEMGDQGPCGPCS 184

Query: 241 EIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLT 300
           EIHYD+   R+ A  VN DDPT IEIWN+VFIQFNRE+D SL+PLP KHVDTG+G ERLT
Sbjct: 185 EIHYDKVPGRNGAPFVNADDPTLIEIWNLVFIQFNREADKSLRPLPNKHVDTGMGLERLT 244

Query: 301 SILQNKMSNYDTDVFMPIFDAIQQATG-ARPYSGKVGADDADKVDMAYRVVADHIRTLSF 359
           SI+Q   +NYDTDVF PIF+AIQ+ TG   PY GKVGA+D+ +VDMAYRV+ADHIRTLSF
Sbjct: 245 SIIQKVPTNYDTDVFKPIFEAIQEVTGYPEPYGGKVGAEDSQQVDMAYRVIADHIRTLSF 304

Query: 360 AIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQR 419
           +IADG+ P  +GR  VLRRILRRAVRYG + L A  GFF+ LV++VV+  G+ +PEL+++
Sbjct: 305 SIADGAAPSVDGRGQVLRRILRRAVRYGKQKLNAPAGFFSKLVDVVVQNFGEFYPELRKK 364

Query: 420 EAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQLM 479
             HIR ++  EE  F KTL KGI++F+K  +     VLS  +A+ L    GFP+DLT +M
Sbjct: 365 PEHIRMVLTREEDMFNKTLEKGIQEFEKMIKKTTDGVLSAPNAYFLSTVCGFPIDLTTIM 424

Query: 480 AEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSFKF 539
           AEE+GL VDI+GF    +   E  R  Q K+    + + A+A A L    +  TDDSFK+
Sbjct: 425 AEEKGLKVDIQGFEKLCEAQSEIDRKRQ-KEKKTELTLGAEANAWLKNNNIKITDDSFKY 483

Query: 540 IWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEG---FIEGLFG 596
              ++ ++ +KAI+ G EF+++V  G   GIVL S++FY EQGGQI+D G   F++    
Sbjct: 484 QQ-KEVQTTVKAIWNGKEFVDTVPKGQLCGIVLESTNFYPEQGGQIYDVGQLSFVDDQKT 542

Query: 597 SFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALR 656
           +F V++ +++GG+V+HIG L+       VG++V   VDY RR  I  NHT THM+N+AL+
Sbjct: 543 AFDVKDCKVFGGYVLHIGYLSYECTELKVGDKVESTVDYTRRSPIMSNHTSTHMVNYALK 602

Query: 657 EVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAE 716
            VLG+ ++Q+GS V   + RFDFS G+ V  + L +I+ IVN+ I  +L+V+++E  LA+
Sbjct: 603 SVLGEGIEQRGSFVDASRFRFDFSFGRAVTKDELAKIDQIVNDLIFKQLNVYAQEVPLAK 662

Query: 717 AKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAE 776
           AK INGLRAVFGEVYPDPVRVV++G  V+ L+ +P N EW + S E CGGTHL+NT++AE
Sbjct: 663 AKTINGLRAVFGEVYPDPVRVVSVGVPVDQLIENPTNAEWANYSIEFCGGTHLTNTKQAE 722

Query: 777 AFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEK-------- 828
            F ++SEE +  G+RRI AVT   A  A E    LE   + A K+ GS L K        
Sbjct: 723 LFTIISEETLGAGVRRIVAVTGSEATAAHELNKELELRFNKALKLTGSELSKEIVALLET 782

Query: 829 ------------------NQVRKAQKKVAE--ENLQ--KAVKVATETAEAAASNGKPFCI 866
                              +++  Q+ +A+  ENLQ  ++ K+     +   S      +
Sbjct: 783 LKSSCISQAVRYNLVEAMKELQSIQRVLAKEVENLQILESSKITERIIQELTSKPSELYV 842

Query: 867 SRVEVGLDAAAVREAVLKV-IEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSE 925
             V +G +   + + + K+  +     VM+ S DE   K      VP+ S  SK +  + 
Sbjct: 843 DLVNLGSNTTVITDTIKKIQAKSNQTAVMLISPDEEKGKVTCIGIVPKDSPISKSVAANV 902

Query: 926 WLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFA 967
           W++   + L G+ G GK  +A G G+   ++  A+ +A +FA
Sbjct: 903 WVSKVTEVLGGKGG-GKAEVAQGVGSKLDKIDEAILVARDFA 943


>gi|6176440|gb|AAF05592.1|AF188717_1 alanyl-tRNA synthetase [Dictyostelium discoideum]
          Length = 946

 Score =  905 bits (2338), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 473/944 (50%), Positives = 620/944 (65%), Gaps = 43/944 (4%)

Query: 62  KVRDTFFKFFEDK-NHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLT 120
           ++R TF  FF +K  H    SS V+P +DPTLLFANAGMNQ+KPIFLG  +P ++ +KL 
Sbjct: 5   QIRKTFIDFFREKYEHTFVPSSAVIPHDDPTLLFANAGMNQFKPIFLGQVNPKSEQAKLK 64

Query: 121 RACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYR 180
           RA N+QKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFG+YFK EAI WAWELLT+VY+
Sbjct: 65  RAVNSQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGNYFKKEAITWAWELLTEVYK 124

Query: 181 LPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPCS 240
           L  +RLY TYF GD + GL  D EA+++WL++LP  RVLPFG K+NFWEMGD GPCGPCS
Sbjct: 125 LDKERLYVTYFRGDPEKGLEADLEAKNLWLQYLPEERVLPFGMKENFWEMGDQGPCGPCS 184

Query: 241 EIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLT 300
           EIHYD+   RD AS VN DDPT IEIWN+VFIQ+NRE+D SL+PLP KHVDTG+G ERLT
Sbjct: 185 EIHYDKVEGRDGASFVNADDPTLIEIWNLVFIQYNREADKSLRPLPQKHVDTGMGLERLT 244

Query: 301 SILQNKMSNYDTDVFMPIFDAIQQATG-ARPYSGKVGADDADKVDMAYRVVADHIRTLSF 359
           SI+Q   +NYDTDVFMPIF AIQ+ TG   PY GKVGA+D  +VDMAYRV+ADHIRTL+F
Sbjct: 245 SIIQKVPTNYDTDVFMPIFAAIQEVTGYPEPYGGKVGAEDTQQVDMAYRVIADHIRTLTF 304

Query: 360 AIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQR 419
           +IADG+ P  +GR  VLRRILRRAVRYG + L A  GFF+ LV++V+   G+ FPEL+++
Sbjct: 305 SIADGAAPSVDGRGQVLRRILRRAVRYGKQKLNAPTGFFSKLVDVVIANFGEFFPELRKK 364

Query: 420 EAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQLM 479
             HI+ ++  EE  F KTL KGI +F+K  +      LS ++A+ L   YGFP+DLT +M
Sbjct: 365 PEHIKMVLTREEDMFNKTLEKGIVEFEKMIKKSVNNTLSAENAYFLSTCYGFPIDLTTIM 424

Query: 480 AEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSFKF 539
           AEE+   VDI+G+    +   E  R  Q K+    + + A+A A L    +  TDDSFK 
Sbjct: 425 AEEKNYKVDIKGYEGLCEAQSEIDRKRQ-KEKKVELTLGAEANAWLKNNDIKPTDDSFK- 482

Query: 540 IWFQDH--KSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEG---FIEGL 594
             ++ H  +SVIKAI+ G EF+++   G  +G+VL +S+FYAEQGGQI+D G   FI+  
Sbjct: 483 --YKQHEIQSVIKAIWNGKEFVDTAPKGTLIGVVLENSNFYAEQGGQIYDIGQLSFIDDQ 540

Query: 595 FGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFA 654
             +F V++ +++GG+V+HIG L+       VG+ V   VDY RR  I  NHT THM+N+A
Sbjct: 541 KTAFDVKDCKVFGGYVLHIGYLSYECDSLKVGDRVELTVDYTRRSPIMSNHTSTHMVNYA 600

Query: 655 LREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATL 714
           L+ +LGD +DQ+GS V  ++ RFDFS G+ +  + L +I+ IVN+QI  +LDV +KE  L
Sbjct: 601 LKNILGDGIDQRGSFVDAQRFRFDFSFGRAITKDELIKIDQIVNDQIFKQLDVHAKEVGL 660

Query: 715 AEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTRE 774
           A AK INGLRAVFGEVYPDPVRVV++G  VE L+ +P N EW + S E CGGTHLSNT++
Sbjct: 661 ASAKKINGLRAVFGEVYPDPVRVVSVGVPVEQLIENPTNPEWANYSIEFCGGTHLSNTKQ 720

Query: 775 AEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEK------ 828
           AE F + SEE +  G+RRI AVT   A  A E    LE   ++A K+ GS L K      
Sbjct: 721 AELFTITSEETLGAGVRRIVAVTGSEAASAIELNKELEVRFNNALKLSGSELAKEIVSLL 780

Query: 829 --------------------NQVRKAQKKVAEEN----LQKAVKVATETAEAAASNGKPF 864
                                +V+  Q+K  +E      Q+A     +T+E  A +    
Sbjct: 781 DLLKVVTISASVRMNLVETLKEVQALQRKQVKEQETILAQQAQTYLEKTSEELAKSQPKV 840

Query: 865 CISRVEVGLDAAAVREAVLKVIEQKGMP-VMVFSTDETTNKAVVCAGVPEKSDQSKQLEV 923
            +  V    +   + E + K+  +  M  +M+ S DE   K      VP+ S+ SK L  
Sbjct: 841 FVDLVNFNSNTPLITETIKKIQTKSPMTAIMLISPDEEKGKVTCIGIVPKDSEISKTLTA 900

Query: 924 SEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFA 967
           + W+    + L    G GK  +A G G+   ++  A+ ++ EFA
Sbjct: 901 NAWVVKVTEVLG-GKGGGKVDVAQGVGSKLDKIDEAILVSREFA 943


>gi|294654445|ref|XP_456501.2| DEHA2A03652p [Debaryomyces hansenii CBS767]
 gi|199428887|emb|CAG84453.2| DEHA2A03652p [Debaryomyces hansenii CBS767]
          Length = 1021

 Score =  905 bits (2338), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 460/866 (53%), Positives = 589/866 (68%), Gaps = 47/866 (5%)

Query: 58  WPATKVRDTFFKFFEDK-NHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           WPA++VR TF  +F+ K NH    SS VVP NDPTLLFANAGMNQYKPIFLGT DP +  
Sbjct: 77  WPASRVRSTFLDYFKVKQNHTFVPSSSVVPHNDPTLLFANAGMNQYKPIFLGTVDPASDF 136

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
           S L RA N+QKCIRAGGKHNDL+DVG+D+YHHTFFEMLGNWSFGDYFK EAI W+WELLT
Sbjct: 137 STLKRAVNSQKCIRAGGKHNDLEDVGRDSYHHTFFEMLGNWSFGDYFKKEAISWSWELLT 196

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
           +VY+L  DRLY TYFGGDEK GL PD EA++ WL   +    +LP   +DNFWEMGD GP
Sbjct: 197 EVYKLEQDRLYVTYFGGDEKQGLQPDLEAKNFWLAVGVAEDHILPGNLEDNFWEMGDQGP 256

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPCSEIHYDR G R+A+SLVN DDP  +E+WNIVF+Q+NRE D SL+ LPAKH+DTGLG
Sbjct: 257 CGPCSEIHYDRIGGRNASSLVNMDDPNVLEVWNIVFMQYNREPDSSLRSLPAKHIDTGLG 316

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
           FERL SILQNK SNYDTDVF PIF+ I++ TG RPY+GK G++D D +D AYRV+ADH+R
Sbjct: 317 FERLVSILQNKSSNYDTDVFQPIFNKIREITGVRPYTGKFGSEDRDGIDTAYRVIADHVR 376

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFP 414
           TL+FAI DG  P NEGR YVLRRILRR  RY  + +    G FF  LV +VV+   ++FP
Sbjct: 377 TLTFAITDGGVPNNEGRGYVLRRILRRGSRYVRKYMNYPIGSFFQQLVPVVVEQNSEIFP 436

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTYGF 471
           E+ + +  + EI+  EE SF KTL +G    E++   A     + LSG+D + L+DTYGF
Sbjct: 437 EILKNQQDLTEILNEEELSFAKTLDRGEKLFEQYAIIASKTPEQTLSGKDVWRLYDTYGF 496

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH-KRGV 530
           P+DLT+LMAEE GL +D EGF  A +E+RE S++  NK     I +D  A + L     V
Sbjct: 497 PVDLTRLMAEEAGLKIDEEGFEKAKEESREASKATNNKAGVSLIKLDVHALSELDGNDKV 556

Query: 531 LATDDSFKFIWFQDHKSVIKAIYTGSEFIESVV-PGNEVGIVLASSSFYAEQGGQIFDEG 589
             TDDSFK+   ++ K+ + AIY GS F++S+   G++ GI+L  + FYAE GGQ +D G
Sbjct: 557 PKTDDSFKYD-IENIKANVVAIYNGSSFVDSISEAGSQAGILLDKTPFYAESGGQEYDTG 615

Query: 590 --FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTC 647
              I+G+   F V NVQ+YGG+V+H GSL EG+    + +E+I   D  RR  I  NHT 
Sbjct: 616 KLVIDGV-AEFSVSNVQVYGGYVLHTGSLLEGS--LKLEDEIIATYDELRRWPIRNNHTG 672

Query: 648 THMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDV 707
           TH+LNFALREVLGD+VDQKGS+V PEKLRFDFSH + + P+ L ++E+I N+ IK    V
Sbjct: 673 THVLNFALREVLGDNVDQKGSLVAPEKLRFDFSHKQGLTPDELLKVETISNDYIKENKQV 732

Query: 708 FSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGT 767
           ++K+  L +AK I+GLRAVFGE YPDPVRVV+IG  VEDLL DP+N EW  +S ELCGGT
Sbjct: 733 YAKDIRLNDAKEIDGLRAVFGETYPDPVRVVSIGTSVEDLLKDPKNSEWHKVSIELCGGT 792

Query: 768 HLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDA--------- 818
           H++ T + +   ++ E GIAKGIRRI AVT   A++  + A   +KE+D           
Sbjct: 793 HVAKTGDIKDLVIIEESGIAKGIRRIVAVTGTEAHQVQKVASDFDKELDHTMGLASGPIK 852

Query: 819 -----------SKIEGSLLEK-----------NQVRKAQKKVAEENLQKAVKVATETAEA 856
                       K+  S+L+K             ++   K V +E  +K ++V       
Sbjct: 853 ETKAKELGVSLKKLSISVLDKRSLNDKFNKLDKSIKDQLKAVQKEESKKVLEVVNTWLN- 911

Query: 857 AASNGKPFCISRVEVGLDAAAVREAV 882
            A + K + +S V +  +A A+ EA+
Sbjct: 912 -AEDAKDYLVSFVPISANAKAITEAI 936


>gi|66816759|ref|XP_642382.1| alanyl-tRNA synthetase [Dictyostelium discoideum AX4]
 gi|74856597|sp|Q54Y20.1|SYAC_DICDI RecName: Full=Alanine--tRNA ligase, cytoplasmic; AltName:
           Full=Alanyl-tRNA synthetase; Short=AlaRS
 gi|60470104|gb|EAL68084.1| alanyl-tRNA synthetase [Dictyostelium discoideum AX4]
          Length = 946

 Score =  904 bits (2336), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 473/944 (50%), Positives = 620/944 (65%), Gaps = 43/944 (4%)

Query: 62  KVRDTFFKFFEDK-NHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLT 120
           ++R TF  FF +K  H    SS V+P +DPTLLFANAGMNQ+KPIFLG  +P ++ +KL 
Sbjct: 5   QIRKTFIDFFREKCEHTFVPSSAVIPHDDPTLLFANAGMNQFKPIFLGQVNPKSEQAKLK 64

Query: 121 RACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYR 180
           RA N+QKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFG+YFK EAI WAWELLT+VY+
Sbjct: 65  RAVNSQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGNYFKKEAITWAWELLTEVYK 124

Query: 181 LPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPCS 240
           L  +RLY TYF GD + GL  D EA+++WL++LP  RVLPFG K+NFWEMGD GPCGPCS
Sbjct: 125 LDKERLYVTYFRGDPEKGLEADLEAKNLWLQYLPEERVLPFGMKENFWEMGDQGPCGPCS 184

Query: 241 EIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLT 300
           EIHYD+   RD AS VN DDPT IEIWN+VFIQ+NRE+D SL+PLP KHVDTG+G ERLT
Sbjct: 185 EIHYDKVEGRDGASFVNADDPTLIEIWNLVFIQYNREADKSLRPLPQKHVDTGMGLERLT 244

Query: 301 SILQNKMSNYDTDVFMPIFDAIQQATG-ARPYSGKVGADDADKVDMAYRVVADHIRTLSF 359
           SI+Q   +NYDTDVFMPIF AIQ+ TG   PY GKVGA+D  +VDMAYRV+ADHIRTL+F
Sbjct: 245 SIIQKVPTNYDTDVFMPIFAAIQEVTGYPEPYGGKVGAEDTQQVDMAYRVIADHIRTLTF 304

Query: 360 AIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQR 419
           +IADG+ P  +GR  VLRRILRRAVRYG + L A  GFF+ LV++V+   G+ FPEL+++
Sbjct: 305 SIADGAAPSVDGRGQVLRRILRRAVRYGKQKLNAPAGFFSKLVDVVIANFGEFFPELRKK 364

Query: 420 EAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQLM 479
             HI+ ++  EE  F KTL KGI +F+K  +      LS ++A+ L   YGFP+DLT +M
Sbjct: 365 PEHIKMVLTREEDMFNKTLEKGIVEFEKMIKKSVNNTLSAENAYFLSTCYGFPIDLTTIM 424

Query: 480 AEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSFKF 539
           AEE+   VDI+G+    +   E  R  Q K+    + + A+A A L    +  TDDSFK 
Sbjct: 425 AEEKNYKVDIKGYEGLCEAQSEIDRKRQ-KEKKVELTLGAEANAWLKNNDIKPTDDSFK- 482

Query: 540 IWFQDH--KSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEG---FIEGL 594
             ++ H  +SVIKAI+ G EF+++   G  +G+VL +S+FYAEQGGQI+D G   FI+  
Sbjct: 483 --YKQHEIQSVIKAIWNGKEFVDTAPKGTLIGVVLENSNFYAEQGGQIYDIGQLSFIDDQ 540

Query: 595 FGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFA 654
             +F V++ +++GG+V+HIG L+       VG+ V   VDY RR  I  NHT THM+N+A
Sbjct: 541 KTAFDVKDCKVFGGYVLHIGYLSYECDSLKVGDRVELTVDYTRRSPIMSNHTSTHMVNYA 600

Query: 655 LREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATL 714
           L+ +LGD +DQ+GS V  ++ RFDFS G+ +  + L +I+ IVN+QI  +LDV +KE  L
Sbjct: 601 LKNILGDGIDQRGSFVDAQRFRFDFSFGRAITKDELIKIDQIVNDQIFKQLDVHAKEVGL 660

Query: 715 AEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTRE 774
           A AK INGLRAVFGEVYPDPVRVV++G  VE L+ +P N EW + S E CGGTHLSNT++
Sbjct: 661 ASAKKINGLRAVFGEVYPDPVRVVSVGVPVEQLIENPTNPEWANYSIEFCGGTHLSNTKQ 720

Query: 775 AEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEK------ 828
           AE F + SEE +  G+RRI AVT   A  A E    LE   ++A K+ GS L K      
Sbjct: 721 AELFTITSEETLGAGVRRIVAVTGSEAASAIELNKELEVRFNNALKLSGSELAKEIVSLL 780

Query: 829 --------------------NQVRKAQKKVAEEN----LQKAVKVATETAEAAASNGKPF 864
                                +V+  Q+K  +E      Q+A     +T+E  A +    
Sbjct: 781 DLLKVVTISASVRMNLVETLKEVQALQRKQVKEQETILAQQAQTYLEKTSEELAKSQPKV 840

Query: 865 CISRVEVGLDAAAVREAVLKVIEQKGMP-VMVFSTDETTNKAVVCAGVPEKSDQSKQLEV 923
            +  V    +   + E + K+  +  M  +M+ S DE   K      VP+ S+ SK L  
Sbjct: 841 FVDLVNFNSNTPLITETIKKIQTKSPMTAIMLISPDEEKGKVTCIGIVPKDSEISKTLTA 900

Query: 924 SEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFA 967
           + W+    + L    G GK  +A G G+   ++  A+ ++ EFA
Sbjct: 901 NAWVVKVTEVLG-GKGGGKVDVAQGVGSKLDKIDEAILVSREFA 943


>gi|299115131|emb|CBN75498.1| Alanyl-tRNA Synthetase [Ectocarpus siliculosus]
          Length = 1122

 Score =  904 bits (2336), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 492/993 (49%), Positives = 626/993 (63%), Gaps = 66/993 (6%)

Query: 36   LISRFSAS--AVAAMPGADPQVVEWPATKVRDTFFKFFEDKN-HVNWKSSPVVPVNDPTL 92
            L++R S+S  AV    G   Q  +W  TKVR TF   F+ K  H  + SSPVVPVNDP+L
Sbjct: 128  LLTRMSSSGSAVQEPEGVGDQQQQWSVTKVRQTFIDHFKSKREHTFYPSSPVVPVNDPSL 187

Query: 93   LFANAGMNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFE 152
            LFANAGMNQ+KP+FLG  DP++ L+ L RA N+QKCIRAGGKHNDLDDVG+D YHHTFFE
Sbjct: 188  LFANAGMNQFKPVFLGQTDPSSPLAGLKRAVNSQKCIRAGGKHNDLDDVGRDVYHHTFFE 247

Query: 153  MLGNWSFGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF 212
            MLG WSFGDYFK EA+EW +E L +V+ LPADRLYATYFGGDE+ GLAPD E RD+WLK 
Sbjct: 248  MLGTWSFGDYFKEEAVEWGFEALNEVFGLPADRLYATYFGGDEELGLAPDLETRDLWLKV 307

Query: 213  LPASRVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFI 272
            LP  RV+P   KDNFWEMGD GPCGPCSE+H+DR G R+AASLVN DDP  IEIWN+VF+
Sbjct: 308  LPEDRVMPGDRKDNFWEMGDVGPCGPCSELHFDRIGGRNAASLVNMDDPDVIEIWNLVFM 367

Query: 273  QFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYS 332
            QFNR+  G+LK LPAKHVDTGLG ERL SILQ+K SNYDTDVF P+FDAIQ  TG  PY 
Sbjct: 368  QFNRDEAGNLKLLPAKHVDTGLGLERLVSILQDKRSNYDTDVFGPLFDAIQDVTGCPPYE 427

Query: 333  GKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLK 392
            GKVG +D    D AYRVVADH R LSFAI DG+ P N+GR YVLRRILRRAVRYG +VLK
Sbjct: 428  GKVGDEDVGLKDTAYRVVADHARALSFAITDGAVPANDGRGYVLRRILRRAVRYGQDVLK 487

Query: 393  AQDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV 452
            A  GFF  +V +VV   GD++PEL+++EA + EII  EE +F   L +GI+ FK+  ++ 
Sbjct: 488  APPGFFQKIVPVVVAEFGDMYPELREKEAFVMEIIKEEEEAFSSMLERGIKHFKEVEEEQ 547

Query: 453  QGK---VLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSR----- 504
            +GK    + G  AF L+D+ GFPLDLTQ+MAEE G+ VD EGF N M   + RS+     
Sbjct: 548  RGKSSNTIPGDTAFFLYDSMGFPLDLTQVMAEEVGMTVDEEGFANEMAAQKARSKEAEAA 607

Query: 505  SAQNKQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEF------ 558
                     A+ + AD T+ L + GV  TDD  K+ W     + + A++ G         
Sbjct: 608  RRAAGAGVRAMALGADETSRLAEEGVKPTDDEAKYTWSTTTGNKVVALFDGETLSTTASQ 667

Query: 559  -----IESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI-------EGLFGSFYVRNVQIY 606
                   S      VGI+L S+ FY+E GGQ+ D G +       +G  G   V +V+++
Sbjct: 668  SGGTAAASSDDATTVGILLDSTPFYSEAGGQVSDSGKLVVSAGGEDGDDGVIEVADVRMF 727

Query: 607  GGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQK 666
            GGF +H+G L  G+   SVG+ V C+VDYDRR+ +APNHT TH LN+ALR+ + + VDQK
Sbjct: 728  GGFALHVGRLVSGS--LSVGDSVRCEVDYDRRRKVAPNHTMTHALNYALRKAVDEGVDQK 785

Query: 667  GSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAV 726
            GS+V  EKLRFDFSHGK +    L   E+IV   I+ E +V+++   L+EAK I GLRAV
Sbjct: 786  GSLVTDEKLRFDFSHGKALTGPQLEESEAIVQRIIQEEKEVYNQVLPLSEAKSIFGLRAV 845

Query: 727  FGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGI 786
            FGEVYPDPVRVV++G  VED+  DP  +EW + S E CGGTH+ NTREAEAF +  E  +
Sbjct: 846  FGEVYPDPVRVVSVGFPVEDMAKDPSREEWATSSVEFCGGTHVGNTREAEAFVITEETAV 905

Query: 787  AKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLE------------------- 827
            AKG+RRITA+T   A +A  A   L+   ++ S ++G  LE                   
Sbjct: 906  AKGVRRITAITGSAAKEAVAAGEVLKLRAEEVSSLKGGELEGAVASFRRDVDGATLSAGV 965

Query: 828  KNQVRKAQKKVAEE-----------NLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            K ++R    K+ +              Q  V  A + A+ A   GK + +  V +G D+ 
Sbjct: 966  KGRLRAQGDKLLKRVAAESKAAAAAAAQSGVDAAVKAAKQAVEEGKTWVVMDVAIGADSK 1025

Query: 877  AVREAVLKVIE-QKGMPVMVFSTD--ETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQP 933
            AV+  +  V +   G+  M FS +    T K +V +     +     L+  EWL ++L  
Sbjct: 1026 AVKRVLDGVSKVAPGLSFMGFSAEGPGATGKLLVFS-AVAGAAAEGGLKADEWLRSSLAA 1084

Query: 934  LKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEF 966
              GR G      A GQ  DA ++   M  A  F
Sbjct: 1085 CGGRGGGRPTS-AQGQAPDAGEMDKGMAAAIAF 1116


>gi|313104284|sp|P40825.3|SYA_YEAST RecName: Full=Alanine--tRNA ligase, mitochondrial; AltName:
           Full=Alanyl-tRNA synthetase; Short=AlaRS; Flags:
           Precursor
          Length = 983

 Score =  899 bits (2322), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 458/893 (51%), Positives = 587/893 (65%), Gaps = 41/893 (4%)

Query: 26  TLAVTNHHHSLISRFSASAVAAMPGADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVV 85
           T  + N   S   + + S    M   D Q  +W AT VR+TF  +F+ K H   KSSPVV
Sbjct: 4   TTGLRNLTLSFKKQLTTSTRTIMTIGDKQ--KWTATNVRNTFLDYFKSKEHKFVKSSPVV 61

Query: 86  PVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDT 145
           P +DPTLLFANAGMNQYKPIFLGT DP +    L RA N+QKCIRAGGKHNDL+DVGKD+
Sbjct: 62  PFDDPTLLFANAGMNQYKPIFLGTVDPASDFYTLKRAYNSQKCIRAGGKHNDLEDVGKDS 121

Query: 146 YHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEA 205
           YHHTFFEMLGNWSFGDYFK EAI ++W LLT+VY +P DRLY TYF GDEK GL PD EA
Sbjct: 122 YHHTFFEMLGNWSFGDYFKKEAITYSWTLLTEVYGIPKDRLYVTYFEGDEKLGLEPDTEA 181

Query: 206 RDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCI 264
           R++W    +P   +LP   KDNFWEMGD GPCGPCSEIHYDR G R+AASLVN DDP  +
Sbjct: 182 RELWKNVGVPDDHILPGNAKDNFWEMGDQGPCGPCSEIHYDRIGGRNAASLVNMDDPDVL 241

Query: 265 EIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQ 324
           E+WN+VFIQFNRE DGSLKPLPAKH+DTG+GFERL S+LQ+  SNYDTDVF P+F+ IQ+
Sbjct: 242 EVWNLVFIQFNREQDGSLKPLPAKHIDTGMGFERLVSVLQDVRSNYDTDVFTPLFERIQE 301

Query: 325 ATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAV 384
            T  RPYSG  G +D D +D AYRV+ADH+RTL+FA+ADG  P NEGR YVLRRILRR  
Sbjct: 302 ITSVRPYSGNFGENDKDGIDTAYRVLADHVRTLTFALADGGVPNNEGRGYVLRRILRRGA 361

Query: 385 RYGSEVLKAQDG-FFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKG-- 441
           RY  + +    G FF+ L   ++  + D+FPEL +  A + EI+  EEASF KTL +G  
Sbjct: 362 RYARKYMNYPIGNFFSTLAPTLISQVQDIFPELAKDPAFLFEILDEEEASFAKTLDRGER 421

Query: 442 -IEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEAR 500
             EK+  AA   + K L G+  + L+DTYGFP+DLT+LMAEE+GL +D  GF  A  E+ 
Sbjct: 422 LFEKYASAASKTESKTLDGKQVWRLYDTYGFPVDLTELMAEEQGLKIDGPGFEKAKQESY 481

Query: 501 ERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIE 560
           E S+    K     I ++    + L+   V  T+D FK+       +++K ++ G+ F++
Sbjct: 482 EASKRGGKKDQSDLIKLNVHELSELNDAKVPKTNDEFKYGSANVEGTILK-LHDGTNFVD 540

Query: 561 SVV-PGNEVGIVLASSSFYAEQGGQIFDEG-FIEGLFGSFYVRNVQIYGGFVIHIGSLTE 618
            +  PG + GI+L  + FYAEQGGQ +D G  +      F V NVQ+Y GFV H GSL E
Sbjct: 541 EITEPGKKYGIILDKTCFYAEQGGQEYDTGKIVIDDAAEFNVENVQLYNGFVFHTGSLEE 600

Query: 619 GAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFD 678
             G+ SVG+++I   D  RR  I  NHT TH+LNFAL+E LG+ VDQKGS+V PEKLRFD
Sbjct: 601 --GKLSVGDKIIASFDELRRFPIKNNHTGTHILNFALKETLGNDVDQKGSLVAPEKLRFD 658

Query: 679 FSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVV 738
           FSH K V  E L+++E I NEQIK  L VF KE  L  AK I+G+RAVFGE YPDPVRVV
Sbjct: 659 FSHKKAVSNEELKKVEDICNEQIKENLQVFYKEIPLDLAKSIDGVRAVFGETYPDPVRVV 718

Query: 739 AIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTT 798
           ++G+ +E+LLA+P N+EW   S E CGGTH++ T + + F +L E GIAKGIRRI AVT 
Sbjct: 719 SVGKPIEELLANPANEEWTKYSIEFCGGTHVNKTGDIKYFVILEESGIAKGIRRIVAVTG 778

Query: 799 GLAYKAFEAACSLEKEVDDASK--------------------IEGSLLEKNQVR----KA 834
             A++A   A     ++D A K                    +  S++ KN+++    K 
Sbjct: 779 TEAFEAQRLAEQFAADLDAADKLPFSPIKEKKLKELGVKLGQLSISVITKNELKQKFNKI 838

Query: 835 QKKVAEENLQKAVKVATETAEAA-----ASNGKPFCISRVEVGLDAAAVREAV 882
           +K V +E   +A K   +T +        +   P+ +  +++  +A A+ EA+
Sbjct: 839 EKAVKDEVKSRAKKENKQTLDEVKTFFETNENAPYLVKFIDISPNAKAITEAI 891


>gi|397634541|gb|EJK71470.1| hypothetical protein THAOC_07085 [Thalassiosira oceanica]
          Length = 1072

 Score =  898 bits (2321), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 488/926 (52%), Positives = 609/926 (65%), Gaps = 63/926 (6%)

Query: 44   AVAAMPGADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYK 103
            A+ +  G  P   EWP  KVR TF  FFE   H  W+SSP VP +DPTLLF NAGMNQYK
Sbjct: 105  AMTSEDGPKPSTTEWPMDKVRSTFISFFERNGHTFWRSSPCVPYDDPTLLFTNAGMNQYK 164

Query: 104  PIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYF 163
            P+FLGT DPN +++ L RACN+QKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFGDYF
Sbjct: 165  PLFLGTVDPNVEMAGLKRACNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYF 224

Query: 164  KNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGC 223
            K EAIE AW+ LT+ + L  +RLYATYFGGDE      D+EARDIWL+FLPA RVLPF  
Sbjct: 225  KKEAIEMAWKCLTEEFGLDPERLYATYFGGDESTPC--DDEARDIWLQFLPAERVLPFDA 282

Query: 224  KDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLK 283
            KDNFWEMG TGPCGPC+EIHYDR GNRDAASLVN D P  IEIWN VFIQFNRE+DGSL+
Sbjct: 283  KDNFWEMGATGPCGPCTEIHYDRIGNRDAASLVNADLPDVIEIWNNVFIQFNREADGSLR 342

Query: 284  PLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKV 343
            PLPA+HVDTG+GFERLTSILQ   SNYDTD+F+P+FDAI+  TGARPY+GK+G++D   V
Sbjct: 343  PLPAQHVDTGMGFERLTSILQGVDSNYDTDIFIPLFDAIRSITGARPYAGKIGSEDEGYV 402

Query: 344  DMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVN 403
            DMAYRVVADH+RTLSFAIADG+ P N+GR YVLRR+LRRAVRYG + L A+ GFF  LV 
Sbjct: 403  DMAYRVVADHVRTLSFAIADGAVPSNDGRGYVLRRVLRRAVRYGRQNLNAELGFFAKLVR 462

Query: 404  IVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG--KVLSGQD 461
             +V +MGD FPEL+++E +I  +I  EE SF KT+ KGI +FKK   D  G  K   G D
Sbjct: 463  TLVDLMGDTFPELREKEEYITSVIREEEESFSKTVDKGIVEFKKMC-DALGDQKTFPGAD 521

Query: 462  AFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQ----AGGAIVM 517
            AF L+   GFP+DLT+LM EERGL++D  GF+  + E +++S+ A  K+     G  + +
Sbjct: 522  AFTLFAERGFPVDLTELMCEERGLVLDTAGFDAKLKEEQDKSKEAHLKKMSAGTGKDMRL 581

Query: 518  DADATAALHKRGVLATDDSFKFIWFQD-HKSVIKAIYTGSE-------FIESVVP-GNEV 568
             A+ T+ L  +GV  TDDS K++W  D   S +KA++ G         F++S+ P    V
Sbjct: 582  VAEQTSHLVGKGVDPTDDSAKYVWDDDLTGSTVKALFVGRNETEDGVGFVDSITPESGAV 641

Query: 569  GIVLASSSFYAEQGGQIFDEGFIEGLFG-SFYVRNVQIYGGFVIHIGSLTEGAGRFSVGE 627
            GIVL  ++FY E GGQI+D G I    G +  V NVQ+YG FV+H+G +   +G  +V E
Sbjct: 642  GIVLDKTNFYGEAGGQIYDTGSIVAASGATIEVTNVQVYGSFVLHLGEVK--SGTVTVDE 699

Query: 628  EVICKVDYDRRKLIAPNHTCTHMLNFALREVL---------GDHVDQKGSVVLPEKLRFD 678
               CKVDY RR  +A NHT TH+LN ALR+VL         G  VDQKGS+    KLRFD
Sbjct: 700  SATCKVDYARRSPVAANHTMTHVLNHALRDVLVTRAESSSAGAAVDQKGSLCDESKLRFD 759

Query: 679  FSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVV 738
            FS    +  + L  +E +  E I+  + V +  A L +A+ I+ LRAVFGE YPDPVRVV
Sbjct: 760  FSWSGALTADQLAAVERMCVETIERGVPVDTLVAALDDARSISSLRAVFGETYPDPVRVV 819

Query: 739  AIGRK-VEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVT 797
            A+    + D+LA+P ++ W   S E CGGTHL NT EA+ F LLSEEGIAKGIRRITAVT
Sbjct: 820  AVSSSPISDMLANPSDERWNDYSVEFCGGTHLKNTSEAKGFVLLSEEGIAKGIRRITAVT 879

Query: 798  TGLAYKAFEAACSLEKEVDDASKIEGSLLEKN-----------QVRKAQKKVAEENL--- 843
               A  A   A   E  V +A K++G  LE              +  A K    + L   
Sbjct: 880  MKDAADATARAAEFEGRVVEAGKLDGFALEAQVKLLTVELGGLSISAAMKMTLRDTLGSY 939

Query: 844  -------------QKAVKVATETAEAAASNGKPFCISRVEVGLD---AAAVREAVLKVIE 887
                         ++  +V  +  EAA S+     + R + G D   A AV  A  K ++
Sbjct: 940  GKRVVAWKKKNAAEQTSRVVDQVVEAAGSSSGDKVVIRCDFGCDGKVAKAVTAAYGKKVK 999

Query: 888  QKGMPVMVFSTDETTNKAVVCAGVPE 913
             K +  M+ S DE++++ +V A  P+
Sbjct: 1000 DKAL--MLVSADESSDRYMVVAFAPK 1023


>gi|354542986|emb|CCE39704.1| hypothetical protein CPAR2_601240 [Candida parapsilosis]
          Length = 961

 Score =  898 bits (2320), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 463/895 (51%), Positives = 591/895 (66%), Gaps = 48/895 (5%)

Query: 57  EWPATKVRDTFFKFFEDK-NHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQ 115
           +W A KVR TF  +F+DK  H    SS VVP NDPTLLFANAGMNQYKPIFLGT DP + 
Sbjct: 12  KWTAPKVRSTFLDYFKDKRQHTYVPSSSVVPHNDPTLLFANAGMNQYKPIFLGTVDPASD 71

Query: 116 LSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELL 175
            +KL RA N+QKCIRAGGKHNDL+DVG+D+YHHTFFEMLGNWSFGDYFK EAI W+WELL
Sbjct: 72  FAKLKRAANSQKCIRAGGKHNDLEDVGRDSYHHTFFEMLGNWSFGDYFKKEAIAWSWELL 131

Query: 176 TKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTG 234
           T VY L  DRLY TYFGGDEK GL  D EA+  WL   +    +LP   KDNFWEMGD G
Sbjct: 132 TDVYGLEKDRLYVTYFGGDEKQGLEADLEAKKFWLDVGVAEDHILPGDAKDNFWEMGDQG 191

Query: 235 PCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           PCGPCSEIHYDR G R+AASLVN DDP  +E+WN+VFIQ+NRE+DGSL+PLP KH+DTG+
Sbjct: 192 PCGPCSEIHYDRIGGRNAASLVNMDDPNVLEVWNVVFIQYNREADGSLRPLPNKHIDTGM 251

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL SILQNK SNYDTDVF+PIFD I++ TG RPY+GK GADD D +D AYRV+ADH+
Sbjct: 252 GFERLVSILQNKSSNYDTDVFLPIFDKIREITGVRPYTGKFGADDKDGIDTAYRVIADHV 311

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVF 413
           RTL+FAI DG  P NEGR YVLRR+LRR  RY  + +    G FF  LV+IV++   ++F
Sbjct: 312 RTLTFAICDGGVPNNEGRGYVLRRVLRRGSRYVRKYMNYPIGSFFPQLVDIVIQQNKEIF 371

Query: 414 PELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTYG 470
           PE++     ++EI+  EE SF KTL +G    E++   A     + LSG+D + L+DTYG
Sbjct: 372 PEIESGSQDLKEILNEEELSFAKTLDRGEKLFEQYAIIASKTPEQTLSGKDVWRLYDTYG 431

Query: 471 FPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGV 530
           FP+DLT+LMAEE GL +D +GF  A +E+RE S+   NK A   I +D  A + L  + V
Sbjct: 432 FPVDLTRLMAEEAGLKIDEKGFEVAKEESREASKGGANKNASSLIKLDVHALSELEGK-V 490

Query: 531 LATDDSFKFIWFQDHKSVIKAIYTGSEFIESVV---PGNEVGIVLASSSFYAEQGGQIFD 587
             TDD  K+    + K+ + AIY GS+F++S+     G + GI+L  + FYAEQGGQ +D
Sbjct: 491 AKTDDDAKY-GLDNIKAKVLAIYDGSKFVDSIQQNEEGQQYGILLDKTPFYAEQGGQEYD 549

Query: 588 EG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            G   I+G    F V NVQ+Y G+V+H G + E  G+ SVG++VI   D  RR  I  NH
Sbjct: 550 TGKLVIDGK-TEFNVENVQVYAGYVLHTGFVLE--GKLSVGDDVIAAYDELRRWPIRNNH 606

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           T TH+LN+ALREVLGD VDQKGS+V  EKLRFDFSH + + P+ L ++E I N+ I+   
Sbjct: 607 TGTHVLNYALREVLGDDVDQKGSLVAKEKLRFDFSHKQALTPKELEKVEGISNQYIRDNK 666

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            V+ K+  L EAK I GLRAVFGE YPDPVRVV+IG  V++LL DP N+EW SIS E CG
Sbjct: 667 QVYYKDVPLTEAKAICGLRAVFGETYPDPVRVVSIGVPVDELLKDPTNEEWRSISIEFCG 726

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSL 825
           GTH++ T E +   ++ E GIAKGIRRI AVT   A+     A   E+E+D A+++    
Sbjct: 727 GTHVAKTSEIKDLVIIEESGIAKGIRRIVAVTGHDAHAVQRVAKEYEQELDHANELPNGP 786

Query: 826 LEKNQVRK-------------------------------AQKKVAEENLQKAVKVATETA 854
           +++N+V++                                QK + +E  +K + V  +  
Sbjct: 787 IKENKVKELGVALKKLSISVLDKQKLTEKFNKVDKSIKDHQKSIQKEESKKTLDVVKKWL 846

Query: 855 EAAASNGKP-FCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVC 908
           +    N K  F ++ + +  +A A+ EA   V +Q     +   T +    A  C
Sbjct: 847 DEGDDNNKSEFLVAHIPINANAKAITEAFNLVKKQDKTKSLYLLTGQNDKVAHGC 901


>gi|398366285|ref|NP_014980.3| alanine--tRNA ligase [Saccharomyces cerevisiae S288c]
 gi|1163069|emb|CAA89980.1| ALA1 [Saccharomyces cerevisiae]
 gi|1420729|emb|CAA99658.1| ALA1 [Saccharomyces cerevisiae]
 gi|285815203|tpg|DAA11096.1| TPA: alanine--tRNA ligase [Saccharomyces cerevisiae S288c]
 gi|392296662|gb|EIW07764.1| Ala1p [Saccharomyces cerevisiae CEN.PK113-7D]
          Length = 958

 Score =  895 bits (2314), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 451/862 (52%), Positives = 577/862 (66%), Gaps = 39/862 (4%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           +W AT VR+TF  +F+ K H   KSSPVVP +DPTLLFANAGMNQYKPIFLGT DP +  
Sbjct: 8   KWTATNVRNTFLDYFKSKEHKFVKSSPVVPFDDPTLLFANAGMNQYKPIFLGTVDPASDF 67

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
             L RA N+QKCIRAGGKHNDL+DVGKD+YHHTFFEMLGNWSFGDYFK EAI ++W LLT
Sbjct: 68  YTLKRAYNSQKCIRAGGKHNDLEDVGKDSYHHTFFEMLGNWSFGDYFKKEAITYSWTLLT 127

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
           +VY +P DRLY TYF GDEK GL PD EAR++W    +P   +LP   KDNFWEMGD GP
Sbjct: 128 EVYGIPKDRLYVTYFEGDEKLGLEPDTEARELWKNVGVPDDHILPGNAKDNFWEMGDQGP 187

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPCSEIHYDR G R+AASLVN DDP  +E+WN+VFIQFNRE DGSLKPLPAKH+DTG+G
Sbjct: 188 CGPCSEIHYDRIGGRNAASLVNMDDPDVLEVWNLVFIQFNREQDGSLKPLPAKHIDTGMG 247

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
           FERL S+LQ+  SNYDTDVF P+F+ IQ+ T  RPYSG  G +D D +D AYRV+ADH+R
Sbjct: 248 FERLVSVLQDVRSNYDTDVFTPLFERIQEITSVRPYSGNFGENDKDGIDTAYRVLADHVR 307

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFP 414
           TL+FA+ADG  P NEGR YVLRRILRR  RY  + +    G FF+ L   ++  + D+FP
Sbjct: 308 TLTFALADGGVPNNEGRGYVLRRILRRGARYARKYMNYPIGNFFSTLAPTLISQVQDIFP 367

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTYGF 471
           EL +  A + EI+  EEASF KTL +G    EK+  AA   + K L G+  + L+DTYGF
Sbjct: 368 ELAKDPAFLFEILDEEEASFAKTLDRGERLFEKYASAASKTESKTLDGKQVWRLYDTYGF 427

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           P+DLT+LMAEE+GL +D  GF  A  E+ E S+    K     I ++    + L+   V 
Sbjct: 428 PVDLTELMAEEQGLKIDGPGFEKAKQESYEASKRGGKKDQSDLIKLNVHELSELNDAKVP 487

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVV-PGNEVGIVLASSSFYAEQGGQIFDEG- 589
            T+D FK+       +++K ++ G+ F++ +  PG + GI+L  + FYAEQGGQ +D G 
Sbjct: 488 KTNDEFKYGSANVEGTILK-LHDGTNFVDEITEPGKKYGIILDKTCFYAEQGGQEYDTGK 546

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
            +      F V NVQ+Y GFV H GSL E  G+ SVG+++I   D  RR  I  NHT TH
Sbjct: 547 IVIDDAAEFNVENVQLYNGFVFHTGSLEE--GKLSVGDKIIASFDELRRFPIKNNHTGTH 604

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +LNFAL+E LG+ VDQKGS+V PEKLRFDFSH K V  E L+++E I NEQIK  L VF 
Sbjct: 605 ILNFALKETLGNDVDQKGSLVAPEKLRFDFSHKKAVSNEELKKVEDICNEQIKENLQVFY 664

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
           KE  L  AK I+G+RAVFGE YPDPVRVV++G+ +E+LLA+P N+EW   S E CGGTH+
Sbjct: 665 KEIPLDLAKSIDGVRAVFGETYPDPVRVVSVGKPIEELLANPANEEWTKYSIEFCGGTHV 724

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK--------- 820
           + T + + F +L E GIAKGIRRI AVT   A++A   A     ++D A K         
Sbjct: 725 NKTGDIKYFVILEESGIAKGIRRIVAVTGTEAFEAQRLAEQFAADLDAADKLPFSPIKEK 784

Query: 821 -----------IEGSLLEKNQVR----KAQKKVAEENLQKAVKVATETAEAA-----ASN 860
                      +  S++ KN+++    K +K V +E   +A K   +T +        + 
Sbjct: 785 KLKELGVKLGQLSISVITKNELKQKFNKIEKAVKDEVKSRAKKENKQTLDEVKTFFETNE 844

Query: 861 GKPFCISRVEVGLDAAAVREAV 882
             P+ +  +++  +A A+ EA+
Sbjct: 845 NAPYLVKFIDISPNAKAITEAI 866


>gi|256272535|gb|EEU07514.1| Ala1p [Saccharomyces cerevisiae JAY291]
          Length = 958

 Score =  895 bits (2313), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 451/862 (52%), Positives = 577/862 (66%), Gaps = 39/862 (4%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           +W AT VR+TF  +F+ K H   KSSPVVP +DPTLLFANAGMNQYKPIFLGT DP +  
Sbjct: 8   KWTATNVRNTFLDYFKSKEHKFVKSSPVVPFDDPTLLFANAGMNQYKPIFLGTVDPASDF 67

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
             L RA N+QKCIRAGGKHNDL+DVGKD+YHHTFFEMLGNWSFGDYFK EAI ++W LLT
Sbjct: 68  YTLKRAYNSQKCIRAGGKHNDLEDVGKDSYHHTFFEMLGNWSFGDYFKKEAITYSWTLLT 127

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
           +VY +P DRLY TYF GDEK GL PD EAR++W    +P   +LP   KDNFWEMGD GP
Sbjct: 128 EVYGIPKDRLYVTYFEGDEKLGLEPDTEARELWKNVGVPDDHILPGNAKDNFWEMGDQGP 187

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPCSEIHYDR G R+AASLVN DDP  +E+WN+VFIQFNRE DGSLKPLPAKH+DTG+G
Sbjct: 188 CGPCSEIHYDRIGGRNAASLVNMDDPDVLEVWNLVFIQFNREQDGSLKPLPAKHIDTGMG 247

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
           FERL S+LQ+  SNYDTDVF P+F+ IQ+ T  RPYSG  G +D D +D AYRV+ADH+R
Sbjct: 248 FERLVSVLQDVRSNYDTDVFTPLFERIQEITSVRPYSGNFGENDKDGIDTAYRVLADHVR 307

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFP 414
           TL+FA+ADG  P NEGR YVLRRILRR  RY  + +    G FF+ L   ++  + D+FP
Sbjct: 308 TLTFALADGGVPNNEGRGYVLRRILRRGARYARKYMNYPIGNFFSTLAPTLISQVQDIFP 367

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTYGF 471
           EL +  A + EI+  EEASF KTL +G    EK+  AA   + K L G+  + L+DTYGF
Sbjct: 368 ELAKDPAFLFEILDEEEASFAKTLDRGERLFEKYASAASKTESKTLDGKQVWRLYDTYGF 427

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           P+DLT+LMAEE+GL +D  GF  A  E+ E S+    K     I ++    + L+   V 
Sbjct: 428 PVDLTELMAEEQGLKIDGPGFEKAKQESYEASKRGGKKDQSDLIKLNVHELSELNDAKVP 487

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVV-PGNEVGIVLASSSFYAEQGGQIFDEG- 589
            T+D FK+       +++K ++ G+ F++ +  PG + GI+L  + FYAEQGGQ +D G 
Sbjct: 488 KTNDEFKYGSANVEGTILK-LHDGTNFVDEITEPGKKYGIILDKTCFYAEQGGQEYDTGK 546

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
            +      F V NVQ+Y GFV H GSL E  G+ SVG+++I   D  RR  I  NHT TH
Sbjct: 547 IVIDDAAEFNVENVQLYNGFVFHTGSLEE--GKLSVGDKIIASFDELRRFPIKNNHTGTH 604

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +LNFAL+E LG+ VDQKGS+V PEKLRFDFSH K V  E L+++E I NEQIK  L VF 
Sbjct: 605 ILNFALKETLGNDVDQKGSLVAPEKLRFDFSHKKAVSNEELKKVEDICNEQIKENLQVFY 664

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
           KE  L  AK I+G+RAVFGE YPDPVRVV++G+ +E+LLA+P N+EW   S E CGGTH+
Sbjct: 665 KEIPLDLAKSIDGVRAVFGETYPDPVRVVSVGKPIEELLANPANEEWTKYSIEFCGGTHV 724

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK--------- 820
           + T + + F +L E GIAKGIRRI AVT   A++A   A     ++D A K         
Sbjct: 725 NKTGDIKYFVILEESGIAKGIRRIVAVTGTEAFEAQRLAEQFAADLDAADKLPFSPIKEK 784

Query: 821 -----------IEGSLLEKNQVR----KAQKKVAEENLQKAVKVATETAEAA-----ASN 860
                      +  S++ KN+++    K +K V +E   +A K   +T +        + 
Sbjct: 785 KLKELGVKLGQLSISVITKNELKQKFNKIEKAVKDEVKSRAKKENKQTLDEVKTFFETNE 844

Query: 861 GKPFCISRVEVGLDAAAVREAV 882
             P+ +  +++  +A A+ EA+
Sbjct: 845 NAPYLVKFIDISPNAKAITEAI 866


>gi|190407630|gb|EDV10897.1| alanyl-tRNA synthetase [Saccharomyces cerevisiae RM11-1a]
 gi|207340860|gb|EDZ69081.1| YOR335Cp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|259149812|emb|CAY86616.1| Ala1p [Saccharomyces cerevisiae EC1118]
 gi|323352223|gb|EGA84760.1| Ala1p [Saccharomyces cerevisiae VL3]
          Length = 958

 Score =  895 bits (2312), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 451/862 (52%), Positives = 577/862 (66%), Gaps = 39/862 (4%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           +W AT VR+TF  +F+ K H   KSSPVVP +DPTLLFANAGMNQYKPIFLGT DP +  
Sbjct: 8   KWTATNVRNTFLDYFKSKEHKFVKSSPVVPFDDPTLLFANAGMNQYKPIFLGTVDPASDF 67

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
             L RA N+QKCIRAGGKHNDL+DVGKD+YHHTFFEMLGNWSFGDYFK EAI ++W LLT
Sbjct: 68  YTLKRAYNSQKCIRAGGKHNDLEDVGKDSYHHTFFEMLGNWSFGDYFKKEAITYSWTLLT 127

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
           +VY +P DRLY TYF GDEK GL PD EAR++W    +P   +LP   KDNFWEMGD GP
Sbjct: 128 EVYGIPKDRLYVTYFEGDEKLGLEPDTEARELWKNVGVPDDHILPGNAKDNFWEMGDQGP 187

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPCSEIHYDR G R+AASLVN DDP  +E+WN+VFIQFNRE DGSLKPLPAKH+DTG+G
Sbjct: 188 CGPCSEIHYDRIGGRNAASLVNMDDPDVLEVWNLVFIQFNREQDGSLKPLPAKHIDTGMG 247

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
           FERL S+LQ+  SNYDTDVF P+F+ IQ+ T  RPYSG  G +D D +D AYRV+ADH+R
Sbjct: 248 FERLVSVLQDVRSNYDTDVFTPLFERIQEITSVRPYSGNFGENDKDGIDTAYRVLADHVR 307

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFP 414
           TL+FA+ADG  P NEGR YVLRRILRR  RY  + +    G FF+ L   ++  + D+FP
Sbjct: 308 TLTFALADGGVPNNEGRGYVLRRILRRGARYARKYMNYPIGNFFSTLAPTLISQVQDIFP 367

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTYGF 471
           EL +  A + EI+  EEASF KTL +G    EK+  AA   + K L G+  + L+DTYGF
Sbjct: 368 ELAKDPAFLFEILDEEEASFAKTLDRGERLFEKYASAASKTESKTLDGKQVWRLYDTYGF 427

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           P+DLT+LMAEE+GL +D  GF  A  E+ E S+    K     I ++    + L+   V 
Sbjct: 428 PVDLTELMAEEQGLKIDGPGFEKAKQESYEASKRGGKKDQSDLIKLNVHELSELNDAKVP 487

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVV-PGNEVGIVLASSSFYAEQGGQIFDEG- 589
            T+D FK+       +++K ++ G+ F++ +  PG + GI+L  + FYAEQGGQ +D G 
Sbjct: 488 KTNDEFKYGSANVEGTILK-LHDGTNFVDEITEPGKKYGIILDKTCFYAEQGGQEYDTGK 546

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
            +      F V NVQ+Y GFV H GSL E  G+ SVG+++I   D  RR  I  NHT TH
Sbjct: 547 IVIDDAAEFNVENVQLYNGFVFHTGSLEE--GKLSVGDKIIASFDELRRFPIKNNHTGTH 604

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +LNFAL+E LG+ VDQKGS+V PEKLRFDFSH K V  E L+++E I NEQIK  L VF 
Sbjct: 605 ILNFALKETLGNDVDQKGSLVAPEKLRFDFSHKKAVSNEELKKVEDICNEQIKENLQVFY 664

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
           KE  L  AK I+G+RAVFGE YPDPVRVV++G+ +E+LLA+P N+EW   S E CGGTH+
Sbjct: 665 KEIPLDLAKSIDGVRAVFGETYPDPVRVVSVGKPIEELLANPANEEWTKYSIEFCGGTHV 724

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK--------- 820
           + T + + F +L E GIAKGIRRI AVT   A++A   A     ++D A K         
Sbjct: 725 NKTGDIKYFVILEESGIAKGIRRIVAVTGTEAFEAQRLAEQFAADLDAADKLPFSPIKEK 784

Query: 821 -----------IEGSLLEKNQVR----KAQKKVAEENLQKAVKVATETAEAA-----ASN 860
                      +  S++ KN+++    K +K V +E   +A K   +T +        + 
Sbjct: 785 KLKELGVKLGQLSISVITKNELKQKFNKIEKAVKDEVKSRAKKENKQTLDEVKTFFETNE 844

Query: 861 GKPFCISRVEVGLDAAAVREAV 882
             P+ +  +++  +A A+ EA+
Sbjct: 845 NAPYLVKFIDISPNAKAITEAI 866


>gi|323335374|gb|EGA76661.1| Ala1p [Saccharomyces cerevisiae Vin13]
 gi|323346372|gb|EGA80661.1| Ala1p [Saccharomyces cerevisiae Lalvin QA23]
 gi|365762987|gb|EHN04519.1| Ala1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
          Length = 958

 Score =  894 bits (2310), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 451/862 (52%), Positives = 576/862 (66%), Gaps = 39/862 (4%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           +W AT VR+TF  +F+ K H   KSSPVVP +DPTLLFANAGMNQYKPIFLGT DP +  
Sbjct: 8   KWTATNVRNTFLDYFKSKEHKFVKSSPVVPFDDPTLLFANAGMNQYKPIFLGTVDPASDF 67

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
             L RA N+QKCIRAGGKHNDL+DVGKD+YHHTFFEMLGNWSFGDYFK EAI ++W LLT
Sbjct: 68  YTLKRAYNSQKCIRAGGKHNDLEDVGKDSYHHTFFEMLGNWSFGDYFKKEAITYSWTLLT 127

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
           +VY +P DRLY TYF GDEK GL PD EAR++W    +P   +LP   KDNFWEMGD GP
Sbjct: 128 EVYGIPKDRLYVTYFEGDEKLGLEPDTEARELWKNVGVPDDHILPGNAKDNFWEMGDQGP 187

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPCSEIHYDR G R+AASLVN DDP  +E+WN+VFIQFNRE DGSLKPLPAKH+DTG+G
Sbjct: 188 CGPCSEIHYDRIGGRNAASLVNMDDPDVLEVWNLVFIQFNREQDGSLKPLPAKHIDTGMG 247

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
           FERL S+LQ+  SNYDTDVF P+F+ IQ+ T  RPYSG  G +D D +D AYRV+ADH+R
Sbjct: 248 FERLVSVLQDVRSNYDTDVFTPLFERIQEITSVRPYSGNFGENDKDGIDTAYRVLADHVR 307

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFP 414
           TL+FA+ADG  P NEGR YVLRRILRR  RY  + +    G FF+ L   ++  + D+FP
Sbjct: 308 TLTFALADGGVPNNEGRGYVLRRILRRGARYARKYMNYPIGNFFSTLAPTLISQVQDIFP 367

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTYGF 471
           EL +  A + EI+  EEASF KTL +G    EK+  AA   + K L G+  + L+DTYGF
Sbjct: 368 ELAKDPAFLFEILDEEEASFAKTLDRGERLFEKYASAASKTESKTLDGKQVWRLYDTYGF 427

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           P+DLT+LMAEE+GL +D  GF  A  E+ E S+    K     I ++    + L+   V 
Sbjct: 428 PVDLTELMAEEQGLKIDGPGFEKAKQESYEASKRGGKKDQSDLIKLNVHELSELNDAKVP 487

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVV-PGNEVGIVLASSSFYAEQGGQIFDEG- 589
            T+D FK+       +++K ++ G+ F++ +  PG   GI+L  + FYAEQGGQ +D G 
Sbjct: 488 KTNDEFKYGSANVEGTILK-LHDGTNFVDEITEPGKXYGIILDKTCFYAEQGGQEYDTGK 546

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
            +      F V NVQ+Y GFV H GSL E  G+ SVG+++I   D  RR  I  NHT TH
Sbjct: 547 IVIDDAAEFNVENVQLYNGFVFHTGSLEE--GKLSVGDKIIASFDELRRFPIKNNHTGTH 604

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +LNFAL+E LG+ VDQKGS+V PEKLRFDFSH K V  E L+++E I NEQIK  L VF 
Sbjct: 605 ILNFALKETLGNDVDQKGSLVAPEKLRFDFSHKKAVSNEELKKVEDICNEQIKENLQVFY 664

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
           KE  L  AK I+G+RAVFGE YPDPVRVV++G+ +E+LLA+P N+EW   S E CGGTH+
Sbjct: 665 KEIPLDLAKSIDGVRAVFGETYPDPVRVVSVGKPIEELLANPANEEWTKYSIEFCGGTHV 724

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK--------- 820
           + T + + F +L E GIAKGIRRI AVT   A++A   A     ++D A K         
Sbjct: 725 NKTGDIKYFVILEESGIAKGIRRIVAVTGTEAFEAQRLAEQFAADLDAADKLPFSPIKEK 784

Query: 821 -----------IEGSLLEKNQVR----KAQKKVAEENLQKAVKVATETAEAA-----ASN 860
                      +  S++ KN+++    K +K V +E   +A K   +T +        + 
Sbjct: 785 KLKELGVKLGQLSISVITKNELKQKFNKIEKAVKDEVKSRAKKENKQTLDEVKTFFETNE 844

Query: 861 GKPFCISRVEVGLDAAAVREAV 882
             P+ +  +++  +A A+ EA+
Sbjct: 845 NAPYLVKFIDISPNAKAITEAI 866


>gi|349581482|dbj|GAA26640.1| K7_Ala1p [Saccharomyces cerevisiae Kyokai no. 7]
          Length = 958

 Score =  894 bits (2310), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 451/862 (52%), Positives = 577/862 (66%), Gaps = 39/862 (4%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           +W AT VR+TF  +F+ K H   KSSPVVP +DPTLLFANAGMNQYKPIFLGT DP +  
Sbjct: 8   KWTATNVRNTFLDYFKSKEHKFVKSSPVVPFDDPTLLFANAGMNQYKPIFLGTVDPASDF 67

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
             L RA N+QKCIRAGGKHNDL+DVGKD+YHHTFFEMLGNWSFGDYFK EAI ++W LLT
Sbjct: 68  YTLKRAYNSQKCIRAGGKHNDLEDVGKDSYHHTFFEMLGNWSFGDYFKKEAITYSWTLLT 127

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
           +VY +P DRLY TYF GDEK GL PD EAR++W    +P   +LP   KDNFWEMGD GP
Sbjct: 128 EVYGIPKDRLYVTYFEGDEKLGLEPDTEARELWKNVGVPDDHILPGNAKDNFWEMGDQGP 187

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPCSEIHYDR G R+AASLVN DDP  +E+WN+VFIQFNRE DGSLKPLPAKH+DTG+G
Sbjct: 188 CGPCSEIHYDRIGGRNAASLVNMDDPDVLEVWNLVFIQFNREQDGSLKPLPAKHIDTGMG 247

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
           FERL S+LQ+  SNYDTDVF P+F+ IQ+ T  RPYSG  G +D D +D AYRV+ADH+R
Sbjct: 248 FERLVSVLQDVRSNYDTDVFTPLFERIQEITSVRPYSGNFGENDKDGIDTAYRVLADHVR 307

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFP 414
           TL+FA+ADG  P NEGR YVLRRILRR  RY  + +    G FF+ L   ++  + D+FP
Sbjct: 308 TLTFALADGGVPNNEGRGYVLRRILRRGARYARKYMNYPIGNFFSTLAPTLISQVQDIFP 367

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTYGF 471
           EL +  A + EI+  EEASF KTL +G    EK+  AA   + K L G+  + L+DTYGF
Sbjct: 368 ELAKDPAFLFEILDEEEASFAKTLDRGERLFEKYASAASKTESKTLDGKQVWRLYDTYGF 427

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           P+DLT+LMAEE+GL +D  GF  A  E+ E S+    K     I ++    + L+   V 
Sbjct: 428 PVDLTELMAEEQGLKIDGPGFEKAKQESYEASKRGGKKDQSDLIKLNVHELSELNDAKVP 487

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVV-PGNEVGIVLASSSFYAEQGGQIFDEG- 589
            T+D FK+       +++K ++ G+ F++ +  PG + GI+L  + FYAEQGGQ +D G 
Sbjct: 488 KTNDEFKYGSANVEGTILK-LHDGTNFVDEITEPGKKYGIILDKTCFYAEQGGQEYDTGK 546

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
            +      F V NVQ+Y GFV H GSL E  G+ SVG+++I   D  RR  I  NHT TH
Sbjct: 547 IVIDDAAEFNVENVQLYNGFVFHTGSLEE--GKLSVGDKIIASFDELRRFPIKNNHTGTH 604

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +LNFAL+E LG+ VDQKGS+V PEKLRFDFSH K V  E L+++E I NEQIK  L VF 
Sbjct: 605 ILNFALKETLGNDVDQKGSLVAPEKLRFDFSHKKAVSNEELKKVEDICNEQIKENLQVFY 664

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
           KE  L  AK I+G+RAVFGE YPDPVRVV++G+ +E+LLA+P N+EW   S E CGGTH+
Sbjct: 665 KEIPLDLAKSIDGVRAVFGETYPDPVRVVSVGKPIEELLANPANEEWTKYSIEFCGGTHV 724

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK--------- 820
           + T + + F +L E GIAKGIRRI AVT   A++A   A     ++D A K         
Sbjct: 725 NKTGDIKYFVILEESGIAKGIRRIVAVTGTEAFEAQRLAEQFGTDLDAADKLPFSPIKEK 784

Query: 821 -----------IEGSLLEKNQVR----KAQKKVAEENLQKAVKVATETAEAA-----ASN 860
                      +  S++ KN+++    K +K V +E   +A K   +T +        + 
Sbjct: 785 KLKELGVKLGQLSISVITKNELKQKFNKIEKAVKDEVKSRAKKENKQTLDEVKTFFETNE 844

Query: 861 GKPFCISRVEVGLDAAAVREAV 882
             P+ +  +++  +A A+ EA+
Sbjct: 845 NAPYLVKFIDISPNAKAITEAI 866


>gi|428174181|gb|EKX43078.1| hypothetical protein GUITHDRAFT_163919 [Guillardia theta CCMP2712]
          Length = 976

 Score =  893 bits (2308), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 466/941 (49%), Positives = 616/941 (65%), Gaps = 72/941 (7%)

Query: 56  VEWPATKVRDTFFKFFEDKN--------HVNWKSSPVVPVNDPTLLFANAGMNQYKPIFL 107
           +EWP ++VR TF +FF+ K+        H  W S+ VVP +DPTLLF NAGMNQ+KPIF+
Sbjct: 4   LEWPVSRVRKTFIEFFQSKDEKGGADGGHTFWASNSVVPYDDPTLLFTNAGMNQFKPIFM 63

Query: 108 GTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEA 167
           GT DP + L+ L RACN+QKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSF  YFK EA
Sbjct: 64  GTVDPKSPLAPLKRACNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFATYFKKEA 123

Query: 168 IEWAWELLTKVYRLPADRLYATYFGGDEKAG--LAPDNEARDIWLKFLPASRVLPFGCKD 225
             WAWELLT VY L  DRLYATY  GD+  G  + PD E R +WL++LP  RVL    KD
Sbjct: 124 TAWAWELLTNVYGLEPDRLYATYCEGDQHKGGTVPPDEETRQLWLQYLPPERVLKGNMKD 183

Query: 226 NFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPL 285
           NFWEMGDTGPCGPC+E+HYDR G R+AA LVN DDP  +EIWN+VFIQ  R  D SL  L
Sbjct: 184 NFWEMGDTGPCGPCTELHYDRIGGRNAAHLVNMDDPNVLEIWNVVFIQMFRNKDQSLSML 243

Query: 286 PAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDM 345
           P KHVDTG+G ER+TSILQ KMSNYDTD+F PIFDAI + TG RPY+GKVG DD+D +DM
Sbjct: 244 PGKHVDTGMGLERITSILQGKMSNYDTDIFTPIFDAIHKRTGVRPYTGKVGKDDSDGIDM 303

Query: 346 AYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVL-----KAQDGFFNG 400
           AYRVVADHIRTL+ A+ DG+ PGN+GR YV+RRILRR VRY  + L     + + GFF+ 
Sbjct: 304 AYRVVADHIRTLTIAVTDGAQPGNDGRNYVIRRILRRGVRYARQYLYPPGTQYEAGFFSS 363

Query: 401 LVNIVVKVMGDVFPELKQREA------HIREIIAAEEASFGKTLLKGIEKFKKAAQ-DVQ 453
           L +IVV V+G+ FPELK           +  II  EE SF +TL +GI +F+K A+ D  
Sbjct: 364 LSSIVVDVLGEAFPELKGNPGVGMTPEKVASIILEEEVSFLRTLDRGIAQFEKFAEMDQS 423

Query: 454 GKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGG 513
              +SG+ AF+L+DT+GFP+DLT LMAEE+G+ VD +G+   M++ R +SR  + K+   
Sbjct: 424 AGRISGEHAFMLYDTFGFPVDLTLLMAEEKGISVDSQGYEECMEKQRAKSR-GEAKEGEV 482

Query: 514 AIVMDADATAALHKR-GVLATDDSFKFIWFQ-----DHKSVIKAIYTGSEFIESVVPGNE 567
            +V++A+ T  L K  GV+ATDDS K+ W          + +KAI+ G EF+     G  
Sbjct: 483 VLVLEAEQTDKLAKELGVVATDDSTKYDWTSAGSGPRGNATVKAIWDGKEFLSEAKEGTY 542

Query: 568 VGIVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGE 627
            G++   ++FYAE GGQ+FD G +      F V+NVQ +GG+++H G+L  G+G   VG+
Sbjct: 543 CGLIFDKTNFYAEAGGQLFDTGRVTTSEAVFNVQNVQKFGGYILHSGNL--GSGSVKVGD 600

Query: 628 EVICKVDYDRRKLIAPNHTCTHMLNFALREVLGD----HVDQKGSVVLPEKLRFDFSHGK 683
                VDY+RR LIA NHT TH+LNFALR+VLG     ++DQ+GS+V P+KLRFDFS+GK
Sbjct: 601 AAELDVDYERRSLIASNHTSTHLLNFALRKVLGADGAVNIDQRGSIVGPDKLRFDFSYGK 660

Query: 684 PVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIG-- 741
           P+  E + ++ ++V E I+    +  KE  L+ AK I  LRAVFGEVYPDPVRVV++G  
Sbjct: 661 PMKVEEVEQVRTLVQELIRGGYPLQKKEVALSAAKQIKSLRAVFGEVYPDPVRVVSVGPV 720

Query: 742 -RKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGL 800
              ++DLLA P++ EW  +S E CGGTH+ NT+EA  F++L EEG AKG+RR+  VT   
Sbjct: 721 PHSIDDLLAKPDSGEWEKLSVEFCGGTHMDNTKEAVDFSILGEEGTAKGVRRVVCVTRDA 780

Query: 801 AYKAFEAA----------------CSLEKEVD----DASKIEGSLLEKNQVRKAQKKVAE 840
           A +A +AA                  L++E+     D   I    + K+ ++K   K+ +
Sbjct: 781 ARQAKQAAEDFDVRVANAGSITDMSELDREISSMRTDVDAIVMDYVRKDAIKKNIDKLKD 840

Query: 841 ENL---QKAVKVATET----AEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQK--GM 891
           + L   ++ +K  T++    AEA   +GK F +  V+V  D  A+ +A +K I  +   +
Sbjct: 841 KVLAWEKQIIKEKTDSALRWAEALEVSGK-FVVEEVDVDGDVKAI-DAAMKTINTRAPAL 898

Query: 892 PVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQ 932
           PV + S     +K    A VP     +  L+  +W+ AAL+
Sbjct: 899 PVCLLSRSSKGDKVSCLAVVP---GGAGGLDAKDWINAALE 936


>gi|151945412|gb|EDN63655.1| alanyl-tRNA synthetase [Saccharomyces cerevisiae YJM789]
          Length = 958

 Score =  892 bits (2306), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 450/862 (52%), Positives = 576/862 (66%), Gaps = 39/862 (4%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           +W AT VR+TF  +F+ K H   KSSPVVP +DPTLLFANAGMNQYKPIFLGT DP +  
Sbjct: 8   KWTATNVRNTFLDYFKSKEHKFVKSSPVVPFDDPTLLFANAGMNQYKPIFLGTVDPASDF 67

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
             L RA N+QKCIRAGGKHNDL+DVGKD+YHHTFFEMLGNWSFGDYFK EAI ++W LLT
Sbjct: 68  YTLKRAYNSQKCIRAGGKHNDLEDVGKDSYHHTFFEMLGNWSFGDYFKKEAITYSWTLLT 127

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
           +VY +P DRLY TYF GDE  GL PD EAR++W    +P   +LP   KDNFWEMGD GP
Sbjct: 128 EVYGIPKDRLYVTYFEGDENLGLEPDTEARELWKNVGVPDDHILPGNAKDNFWEMGDQGP 187

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPCSEIHYDR G R+AASLVN DDP  +E+WN+VFIQFNRE DGSLKPLPAKH+DTG+G
Sbjct: 188 CGPCSEIHYDRIGGRNAASLVNMDDPDVLEVWNLVFIQFNREQDGSLKPLPAKHIDTGMG 247

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
           FERL S+LQ+  SNYDTDVF P+F+ IQ+ T  RPYSG  G +D D +D AYRV+ADH+R
Sbjct: 248 FERLVSVLQDVRSNYDTDVFTPLFERIQEITSVRPYSGNFGENDKDGIDTAYRVLADHVR 307

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFP 414
           TL+FA+ADG  P NEGR YVLRRILRR  RY  + +    G FF+ L   ++  + D+FP
Sbjct: 308 TLTFALADGGVPNNEGRGYVLRRILRRGARYARKYMNYPIGNFFSTLAPTLISQVQDIFP 367

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTYGF 471
           EL +  A + EI+  EEASF KTL +G    EK+  AA   + K L G+  + L+DTYGF
Sbjct: 368 ELAKDPAFLFEILDEEEASFAKTLDRGERLFEKYASAASKTESKTLDGKQVWRLYDTYGF 427

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           P+DLT+LMAEE+GL +D  GF  A  E+ E S+    K     I ++    + L+   V 
Sbjct: 428 PVDLTELMAEEQGLKIDGPGFEKAKQESYEASKRGGKKDQSDLIKLNVHELSELNDAKVP 487

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVV-PGNEVGIVLASSSFYAEQGGQIFDEG- 589
            T+D FK+       +++K ++ G+ F++ +  PG + GI+L  + FYAEQGGQ +D G 
Sbjct: 488 KTNDEFKYGSANVEGTILK-LHDGTNFVDEITEPGKKYGIILDKTCFYAEQGGQEYDTGK 546

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
            +      F V NVQ+Y GFV H GSL E  G+ SVG+++I   D  RR  I  NHT TH
Sbjct: 547 IVIDDAAEFNVENVQLYNGFVFHTGSLEE--GKLSVGDKIIASFDELRRFPIKNNHTGTH 604

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +LNFAL+E LG+ VDQKGS+V PEKLRFDFSH K V  E L+++E I NEQIK  L VF 
Sbjct: 605 ILNFALKETLGNDVDQKGSLVAPEKLRFDFSHKKAVSNEELKKVEDICNEQIKENLQVFY 664

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
           KE  L  AK I+G+RAVFGE YPDPVRVV++G+ +E+LLA+P N+EW   S E CGGTH+
Sbjct: 665 KEIPLDLAKSIDGVRAVFGETYPDPVRVVSVGKPIEELLANPANEEWTKYSIEFCGGTHV 724

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK--------- 820
           + T + + F +L E GIAKGIRRI AVT   A++A   A     ++D A K         
Sbjct: 725 NKTGDIKYFVILEESGIAKGIRRIVAVTGTEAFEAQRLAEQFAADLDAADKLPFSPIKEK 784

Query: 821 -----------IEGSLLEKNQVR----KAQKKVAEENLQKAVKVATETAEAA-----ASN 860
                      +  S++ KN+++    K +K V +E   +A K   +T +        + 
Sbjct: 785 KLKELGVKLGQLSISVITKNELKQKFNKIEKAVKDEVKSRAKKENKQTLDEVKTFFETNE 844

Query: 861 GKPFCISRVEVGLDAAAVREAV 882
             P+ +  +++  +A A+ EA+
Sbjct: 845 NAPYLVKFIDISPNAKAITEAI 866


>gi|609338|gb|AAC49007.1| cytoplasmic alanyl-tRNA synthetase [Saccharomyces cerevisiae]
 gi|1097386|prf||2113423A Ala-tRNA synthetase
          Length = 958

 Score =  891 bits (2303), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 449/862 (52%), Positives = 576/862 (66%), Gaps = 39/862 (4%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           +W AT VR+TF  +F+ K H   KSSPVVP +DPTLLFANAGMNQYKPIFLGT DP +  
Sbjct: 8   KWTATNVRNTFLDYFKSKEHKFVKSSPVVPFDDPTLLFANAGMNQYKPIFLGTVDPASDF 67

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
             L RA N+QKCIRAGGKHNDL+DVGKD+YHHTFFEMLGNWSFGDYFK EAI ++W LLT
Sbjct: 68  YTLKRAYNSQKCIRAGGKHNDLEDVGKDSYHHTFFEMLGNWSFGDYFKKEAITYSWTLLT 127

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
           +VY +P D LY TYF GDEK GL PD EAR++W    +P   +LP   KDNFWEMGD GP
Sbjct: 128 EVYGIPKDSLYVTYFEGDEKLGLEPDTEARELWKNVGVPDDHILPGNAKDNFWEMGDQGP 187

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPCSEIHYDR G R+AASLVN DDP  +E+WN+VFIQFNRE DGSLKPLPAKH+DTG+G
Sbjct: 188 CGPCSEIHYDRIGGRNAASLVNMDDPDVLEVWNLVFIQFNREQDGSLKPLPAKHIDTGMG 247

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
           FERL S+LQ+  SNYDTDVF P+F+ IQ+ T  RPYSG  G +D D +D AYRV+ADH+R
Sbjct: 248 FERLVSVLQDVRSNYDTDVFTPLFERIQEITSVRPYSGNFGENDKDGIDTAYRVLADHVR 307

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFP 414
           TL+FA+ADG  P NEGR YVLRRILRR  RY  + +    G FF+ L   ++  + D+FP
Sbjct: 308 TLTFALADGGVPNNEGRGYVLRRILRRGARYARKYMNYPIGNFFSTLAPTLISQVQDIFP 367

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTYGF 471
           EL +  A + EI+  EEASF KTL +G    EK+  AA   + K L G+  + L+DTYGF
Sbjct: 368 ELAKDPAFLFEILDEEEASFAKTLDRGERLFEKYASAASKTESKTLDGKQVWRLYDTYGF 427

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           P+DLT+LMAEE+GL +D  GF  A  E+ E S+    +     I ++    + L+   V 
Sbjct: 428 PVDLTELMAEEQGLKIDGPGFEKAKQESYEASKRGGKRTKSDLIKLNVHELSELNDAKVP 487

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVV-PGNEVGIVLASSSFYAEQGGQIFDEG- 589
            T+D FK+       +++K ++ G+ F++ +  PG + GI+L  + FYAEQGGQ +D G 
Sbjct: 488 KTNDEFKYGSANVEGTILK-LHDGTNFVDEITEPGKKYGIILDKTCFYAEQGGQEYDTGK 546

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
            +      F V NVQ+Y GFV H GSL E  G+ SVG+++I   D  RR  I  NHT TH
Sbjct: 547 IVIDDAAEFNVENVQLYNGFVFHTGSLEE--GKLSVGDKIIASFDELRRFPIKNNHTGTH 604

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +LNFAL+E LG+ VDQKGS+V PEKLRFDFSH K V  E L+++E I NEQIK  L VF 
Sbjct: 605 ILNFALKETLGNDVDQKGSLVAPEKLRFDFSHKKAVSNEELKKVEDICNEQIKENLQVFY 664

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
           KE  L  AK I+G+RAVFGE YPDPVRVV++G+ +E+LLA+P N+EW   S E CGGTH+
Sbjct: 665 KEIPLDLAKSIDGVRAVFGETYPDPVRVVSVGKPIEELLANPANEEWTKYSIEFCGGTHV 724

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK--------- 820
           + T + + F +L E GIAKGIRRI AVT   A++A   A     ++D A K         
Sbjct: 725 NKTGDIKYFVILEESGIAKGIRRIVAVTGTEAFEAQRLAEQFAADLDAADKLPFSPIKEK 784

Query: 821 -----------IEGSLLEKNQVR----KAQKKVAEENLQKAVKVATETAEAA-----ASN 860
                      +  S++ KN+++    K +K V +E   +A K   +T +        + 
Sbjct: 785 KLKELGVKLGQLSISVITKNELKQKFNKIEKAVKDEVKSRAKKENKQTLDEVKTFLQTNE 844

Query: 861 GKPFCISRVEVGLDAAAVREAV 882
             P+ +  +++  +A A+ EA+
Sbjct: 845 NAPYLVKFIDISPNAKAITEAI 866


>gi|323303022|gb|EGA56826.1| Ala1p [Saccharomyces cerevisiae FostersB]
          Length = 810

 Score =  891 bits (2303), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 441/803 (54%), Positives = 559/803 (69%), Gaps = 10/803 (1%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           +W AT VR+TF  +F+ K H   KSSPVVP +DPTLLFANAGMNQYKPIFLGT DP +  
Sbjct: 8   KWTATNVRNTFLDYFKSKEHKFVKSSPVVPFDDPTLLFANAGMNQYKPIFLGTVDPASDF 67

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
             L RA N+QKCIRAGGKHNDL+DVGKD+YHHTFFEMLGNWSFGDYFK EAI ++W LLT
Sbjct: 68  YTLKRAYNSQKCIRAGGKHNDLEDVGKDSYHHTFFEMLGNWSFGDYFKKEAITYSWTLLT 127

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
           +VY +P DRLY TYF GDEK GL PD EAR++W    +P   +LP   KDNFWEMGD GP
Sbjct: 128 EVYGIPKDRLYVTYFEGDEKLGLEPDTEARELWKNVGVPDDHILPGNAKDNFWEMGDQGP 187

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPCSEIHYDR G R+AASLVN DDP  +E+WN+VFIQFNRE DGSLKPLPAKH+DTG+G
Sbjct: 188 CGPCSEIHYDRIGGRNAASLVNMDDPDVLEVWNLVFIQFNREQDGSLKPLPAKHIDTGMG 247

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
           FERL S+LQ+  SNYDTDVF P+F+ IQ+ T  RPYSG  G +D D +D AYRV+ADH+R
Sbjct: 248 FERLVSVLQDVRSNYDTDVFTPLFERIQEITSVRPYSGNFGENDKDGIDTAYRVLADHVR 307

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFP 414
           TL+FA+ADG  P NEGR YVLRRILRR  RY  + +    G FF+ L   ++  + D+FP
Sbjct: 308 TLTFALADGGVPNNEGRGYVLRRILRRGARYARKYMNYPIGNFFSTLAPTLISQVQDIFP 367

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTYGF 471
           EL +  A + EI+  EEASF KTL +G    EK+  AA   + K L G+  + L+DTYGF
Sbjct: 368 ELAKDPAFLFEILDEEEASFAKTLDRGERLFEKYASAASKTESKTLDGKQVWRLYDTYGF 427

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           P+DLT+LMAEE+GL +D  GF  A  E+ E S+    K     I ++    + L+   V 
Sbjct: 428 PVDLTELMAEEQGLKIDGPGFEKAKQESYEASKRGGKKDQSDLIKLNVHELSELNDAKVP 487

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVV-PGNEVGIVLASSSFYAEQGGQIFDEG- 589
            T+D FK+       +++K ++ G+ F++ +  PG + GI+L  + FYAEQGGQ +D G 
Sbjct: 488 KTNDEFKYGSANVEGTILK-LHDGTNFVDEITEPGKKYGIILDKTCFYAEQGGQEYDTGK 546

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
            +      F V NVQ+Y GFV H GSL E  G+ SVG+++I   D  RR  I  NHT TH
Sbjct: 547 IVIDDAAEFNVENVQLYNGFVFHTGSLEE--GKLSVGDKIIASFDELRRFPIKNNHTGTH 604

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +LNFAL+E LG+ VDQKGS+V PEKLRFDFSH K V  E L+++E I NEQIK  L VF 
Sbjct: 605 ILNFALKETLGNDVDQKGSLVAPEKLRFDFSHKKAVSNEELKKVEDICNEQIKENLQVFY 664

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
           KE  L  AK I+G+RAVFGE YPDPVRVV++G+ +E+LLA+P N+EW   S E CGGTH+
Sbjct: 665 KEIPLDLAKSIDGVRAVFGETYPDPVRVVSVGKPIEELLANPANEEWTKYSIEFCGGTHV 724

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKN 829
           + T + + F +L E GIAKGIRRI AVT   A++A   A     ++D A K+  S +++ 
Sbjct: 725 NKTGDIKYFVILEESGIAKGIRRIVAVTGTEAFEAQRLAEQFAADLDAADKLPFSPIKEK 784

Query: 830 QVRKAQKKVAEENLQKAVKVATE 852
           ++++   K+ + ++    K  TE
Sbjct: 785 KLKELGVKLGQLSISVITKNRTE 807


>gi|213404528|ref|XP_002173036.1| alanyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
 gi|212001083|gb|EEB06743.1| alanyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
          Length = 961

 Score =  891 bits (2302), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 473/971 (48%), Positives = 618/971 (63%), Gaps = 69/971 (7%)

Query: 54  QVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPN 113
           + +EWPA KVR TF  +F++  H    SS V+P  DPTLLFANAGMNQYKPIFLGT DP+
Sbjct: 5   ETLEWPANKVRSTFIDYFKEHGHTFVPSSSVIPFEDPTLLFANAGMNQYKPIFLGTVDPS 64

Query: 114 TQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWE 173
           +  +KL RACN+QKCIRAGGKHNDL+DVGKD YHHT FEMLGNWSFGDYFK EAI  AW+
Sbjct: 65  SSFAKLKRACNSQKCIRAGGKHNDLEDVGKDNYHHTMFEMLGNWSFGDYFKKEAIPLAWK 124

Query: 174 LLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGD 232
           LLT+V++L  D+LY TYFGG E++GL PD EA++IWL+  +P  RV+P   KDNFWEMG+
Sbjct: 125 LLTEVFKLNPDQLYVTYFGGHEESGLGPDLEAKNIWLEMGIPPERVIPGNLKDNFWEMGE 184

Query: 233 TGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDT 292
            GPCGPCSEIHYDR G R    LVN DDP  +EIWNIVF++FNRE DGSL+PLP KH+DT
Sbjct: 185 QGPCGPCSEIHYDRIGGRSVPELVNQDDPNVLEIWNIVFMEFNREKDGSLRPLPNKHIDT 244

Query: 293 GLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVAD 352
           G+GFERL S++QNK SNYDTD+F P+F  IQ+ TGARPY G++G DD D +D AYRVVAD
Sbjct: 245 GMGFERLVSVVQNKSSNYDTDLFAPLFQKIQELTGARPYEGRMGEDDVDGIDTAYRVVAD 304

Query: 353 HIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGD 411
           H+RTL+FAI+DG  P NEGR YVLRRILRR  RY  +      G FF+ L  +V + MG+
Sbjct: 305 HVRTLTFAISDGGVPNNEGRGYVLRRILRRGARYVRKKFNTPIGDFFSRLALVVAEQMGE 364

Query: 412 VFPELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDT 468
            FPE++ +   ++EI+  EE SF +TL +G    E++  AAQ  + K+L G D + L++T
Sbjct: 365 FFPEVRSKLEDVKEILDEEEESFSRTLDRGEKMFEQYAAAAQKTESKMLKGMDVWRLYET 424

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGG----AIVMDADATAA 524
           YGFP+DLT LMAEE GL +D+EGFN A   ++E SR A   +AGG     + +D  A  A
Sbjct: 425 YGFPVDLTHLMAEEAGLKIDVEGFNAAQAHSKEISRRA--AKAGGDSATMVTLDIHALGA 482

Query: 525 LHKRG-VLATDDSFKFIWFQDHKS-----VIKAIYTGSEF---IESVVPGNEVGIVLASS 575
           L K   V  TDD FK      H+S      +KA+Y  S F    E    G  +GI+L  +
Sbjct: 483 LAKMPEVPKTDDHFK------HESGTINATVKALYHPSGFQTSTEKFEAGENIGILLDRT 536

Query: 576 SFYAEQGGQIFDEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKV 633
           +FYAEQGGQ +D G   I+G    F V NVQ+YGG+V+H G    G+   +VG+EVIC+ 
Sbjct: 537 NFYAEQGGQEYDTGRITIDGKL-EFRVTNVQVYGGYVLHTGFCEYGS--LNVGDEVICEY 593

Query: 634 DYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRI 693
           D  RR+ +  NHT TH+LNFALREVLG+ VDQ+GS+V PEKLRFDFSH   +  + L R+
Sbjct: 594 DELRRRPLMNNHTVTHILNFALREVLGEGVDQRGSLVSPEKLRFDFSHKAALSIKELERV 653

Query: 694 ESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPEN 753
           E+I N++I   L V++KE  LA +K I GLRAVFGEVYPDPVRVV +G  +++++ DP+N
Sbjct: 654 ENICNQKIAENLRVYAKELPLAISKEIAGLRAVFGEVYPDPVRVVCVGADIDEIIKDPKN 713

Query: 754 KEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEK 813
           ++W   S E CGGTHL  T E + F +L E GIAKGIRRI AVT   A +    A   ++
Sbjct: 714 EQWRQYSIEFCGGTHLPKTGEIKDFVILEESGIAKGIRRIVAVTAADANQVCRIANEFDQ 773

Query: 814 EVD--------------------DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATET 853
            +D                    D S++  S L K+ +++   K+ ++  Q  VK A   
Sbjct: 774 RLDRLAAMPHGPEKEAEIKLVTVDLSQLSVSALRKHAMKEKFTKITKQ-FQDQVKAANAK 832

Query: 854 AEAAASNG----------KPFCISRVEVGLDAAAVREAV---LKVIEQKGMPVMVFSTDE 900
            +  A               F +S++ V  +   +  A+    K +  K + ++  +  +
Sbjct: 833 EQKDAVKAVADYFEEHPESKFFVSKLNVSPNPKVLNFAISYAKKNLAGKSLYLLASNGAQ 892

Query: 901 TTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAM 960
               A  C    E      ++   EW       + GRCG GK     G GT+A ++  A+
Sbjct: 893 PDKVAHACLVSQEA---LPKVTAQEWSQKVSHVVGGRCG-GKKDSCQGVGTNADKIDQAI 948

Query: 961 DLAAEFAAMKL 971
           + A EF   KL
Sbjct: 949 EEAIEFFQGKL 959


>gi|323307226|gb|EGA60508.1| Ala1p [Saccharomyces cerevisiae FostersO]
          Length = 833

 Score =  890 bits (2301), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 438/791 (55%), Positives = 554/791 (70%), Gaps = 10/791 (1%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           +W AT VR+TF  +F+ K H   KSSPVVP +DPTLLFANAGMNQYKPIFLGT DP +  
Sbjct: 8   KWTATNVRNTFLDYFKSKEHKFVKSSPVVPFDDPTLLFANAGMNQYKPIFLGTVDPASDF 67

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
             L RA N+QKCIRAGGKHNDL+DVGKD+YHHTFFEMLGNWSFGDYFK EAI ++W LLT
Sbjct: 68  YTLKRAYNSQKCIRAGGKHNDLEDVGKDSYHHTFFEMLGNWSFGDYFKKEAITYSWTLLT 127

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
           +VY +P DRLY TYF GDEK GL PD EAR++W    +P   +LP   KDNFWEMGD GP
Sbjct: 128 EVYGIPKDRLYVTYFEGDEKLGLEPDTEARELWKNVGVPDDHILPGNAKDNFWEMGDQGP 187

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPCSEIHYDR G R+AASLVN DDP  +E+WN+VFIQFNRE DGSLKPLPAKH+DTG+G
Sbjct: 188 CGPCSEIHYDRIGGRNAASLVNMDDPDVLEVWNLVFIQFNREQDGSLKPLPAKHIDTGMG 247

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
           FERL S+LQ+  SNYDTDVF P+F+ IQ+ T  RPYSG  G +D D +D AYRV+ADH+R
Sbjct: 248 FERLVSVLQDVRSNYDTDVFTPLFERIQEITSVRPYSGNFGENDKDGIDTAYRVLADHVR 307

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFP 414
           TL+FA+ADG  P NEGR YVLRRILRR  RY  + +    G FF+ L   ++  + D+FP
Sbjct: 308 TLTFALADGGVPNNEGRGYVLRRILRRGARYARKYMNYPIGNFFSTLAPTLISQVQDIFP 367

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTYGF 471
           EL +  A + EI+  EEASF KTL +G    EK+  AA   + K L G+  + L+DTYGF
Sbjct: 368 ELAKDPAFLFEILDEEEASFAKTLDRGERLFEKYASAASKTESKTLDGKQVWRLYDTYGF 427

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           P+DLT+LMAEE+GL +D  GF  A  E+ E S+    K     I ++    + L+   V 
Sbjct: 428 PVDLTELMAEEQGLKIDGPGFEKAKQESYEASKRGGKKDQSDLIKLNVHELSELNDAKVP 487

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVV-PGNEVGIVLASSSFYAEQGGQIFDEG- 589
            T+D FK+       +++K ++ G+ F++ +  PG + GI+L  + FYAEQGGQ +D G 
Sbjct: 488 KTNDEFKYGSANVEGTILK-LHDGTNFVDEITEPGKKYGIILDKTCFYAEQGGQEYDTGK 546

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
            +      F V NVQ+Y GFV H GSL E  G+ SVG+++I   D  RR  I  NHT TH
Sbjct: 547 IVIDDAAEFNVENVQLYNGFVFHTGSLEE--GKLSVGDKIIASFDELRRFPIKNNHTGTH 604

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +LNFAL+E LG+ VDQKGS+V PEKLRFDFSH K V  E L+++E I NEQIK  L VF 
Sbjct: 605 ILNFALKETLGNDVDQKGSLVAPEKLRFDFSHKKAVSNEELKKVEDICNEQIKENLQVFY 664

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
           KE  L  AK I+G+RAVFGE YPDPVRVV++G+ +E+LLA+P N+EW   S E CGGTH+
Sbjct: 665 KEIPLDLAKSIDGVRAVFGETYPDPVRVVSVGKPIEELLANPANEEWTKYSIEFCGGTHV 724

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKN 829
           + T + + F +L E GIAKGIRRI AVT   A++A   A     ++D A K+  S +++ 
Sbjct: 725 NKTGDIKYFVILEESGIAKGIRRIVAVTGTEAFEAQRLAEQFAADLDAADKLPFSPIKEK 784

Query: 830 QVRKAQKKVAE 840
           ++++   K+ +
Sbjct: 785 KLKELGVKLGQ 795


>gi|224064089|ref|XP_002186563.1| PREDICTED: alanine--tRNA ligase, cytoplasmic [Taeniopygia guttata]
          Length = 968

 Score =  889 bits (2297), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 475/968 (49%), Positives = 626/968 (64%), Gaps = 67/968 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A+++R  F  FF +  H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  L+KL
Sbjct: 7   ASQIRQRFIDFFRENKHTYVHSSSTIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPLAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A + A ELLTK +
Sbjct: 67  SRATNTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKLALELLTKEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +PA+RLY TYFGG+E AGL PD E + IWL   L   R+LP   KDNFWEMGDTGPCGP
Sbjct: 127 GIPAERLYVTYFGGNEAAGLQPDLECKQIWLDLGLAEGRILPGSMKDNFWEMGDTGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G+RDA+ LVN DDP  +EIWN+VFIQFNRE+DG+LKPLP K +DTG+G ER
Sbjct: 187 CSEIHYDRIGDRDASHLVNQDDPNVLEIWNLVFIQFNREADGTLKPLPKKSIDTGMGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+F+P F+AIQ+ TGARPY G+VGA+DAD +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFLPYFEAIQKGTGARPYLGQVGAEDADGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A++DG  P N GR YVLRRILRRAVRY  E L A  GFF  LV++VV+ +GD FPELK+
Sbjct: 307 LALSDGGRPDNTGRGYVLRRILRRAVRYSHEKLNAPKGFFATLVDVVVQSLGDAFPELKK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
               +++II  EE  F KTL +G     +  Q +   KV+ G  A++L+DTYGFP DLT 
Sbjct: 367 DPDMVKDIINEEEDQFLKTLSRGRRILDRKIQSLGDSKVIPGDTAWLLYDTYGFPADLTG 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
           L+AEE+GL+VD+EGF      A+ +S   Q K AGG   +++D  A   L  +G+  TDD
Sbjct: 427 LIAEEKGLVVDMEGFEEERKNAQLKS---QGKGAGGEDLLMLDIYAIEELRAQGLEVTDD 483

Query: 536 SFKFIWFQDHK---------SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           S K+ +  D           + +KAI    +F+E V  G E GIVL  + FYAEQGGQI+
Sbjct: 484 SPKYNYASDLSGTYDFGSLVATVKAIRREKKFVEEVSTGQECGIVLDRTCFYAEQGGQIY 543

Query: 587 DEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           D+G++     S      F V+NVQ+ GG+V+HIG+L    G   VG++V   +D  RR+ 
Sbjct: 544 DQGYMVKDDDSREDKTEFTVKNVQVRGGYVLHIGTLY---GSLKVGDQVHLTIDEARRRP 600

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           +  NHT TH+LNFALR VLG+  DQ+GS+V P++LRFDF+    +  + ++++E I N+ 
Sbjct: 601 VMSNHTATHILNFALRSVLGE-ADQRGSLVAPDRLRFDFTAKGALSTQEIKKVEGIANQM 659

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I+    V++K+  LAEAK I GLRAVF E YPDPVRVV+IG  VE+LLADP        S
Sbjct: 660 IEESKTVYAKDCPLAEAKAIQGLRAVFDETYPDPVRVVSIGIPVEELLADPSGPGGSITS 719

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSL--------- 811
            E CGGTHL N+  A +F ++SEE IAKGIRRI AVT   A KA     SL         
Sbjct: 720 IEFCGGTHLQNSSHAGSFVIVSEEAIAKGIRRIVAVTGAEARKALRKVDSLRKLLSALEA 779

Query: 812 ------------EKEVDDASKIEGSLL----EKNQVR---KAQKKVAEE-------NLQK 845
                       +KE+ D  +   + +    +K+++R   KA KKV ++       ++QK
Sbjct: 780 KVKVQTAPNKDVQKEITDLGETLATAIIPQWQKDELREAVKALKKVMDDLDRASKADIQK 839

Query: 846 AVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKG--MPVMVFSTDETTN 903
            V   T+    +  N +P+ I  +E G  A A+ E+ LK+ +        M+F+ D    
Sbjct: 840 RVLEKTKQVIESHPN-QPWVIMEMENGASAKALNES-LKLFKTNSPQTAAMLFAVDNEAG 897

Query: 904 KAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLA 963
           +      VP+++  +K L+ S+W+      + G+ G GK   A   G +   +  A+ LA
Sbjct: 898 RITCLCQVPQET-ANKGLKASQWVQEVSGLMDGK-GGGKDISAQATGKNVGCLQEALKLA 955

Query: 964 AEFAAMKL 971
            +FA ++L
Sbjct: 956 TDFARLRL 963


>gi|344229501|gb|EGV61386.1| hypothetical protein CANTEDRAFT_109802 [Candida tenuis ATCC 10573]
          Length = 953

 Score =  888 bits (2294), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 474/960 (49%), Positives = 614/960 (63%), Gaps = 57/960 (5%)

Query: 56  VEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQ 115
           +EW A+KVR TF  FF+DK H    SS VVP NDPTLLFANAGMNQYKPIFLGT DP++ 
Sbjct: 7   IEWSASKVRTTFLDFFKDKKHTFVPSSSVVPHNDPTLLFANAGMNQYKPIFLGTVDPSSD 66

Query: 116 LSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELL 175
            + L RA N+QKCIRAGGKHNDL+DVG+D+YHHTFFEMLGNWSFGDYFK EAI ++W LL
Sbjct: 67  FANLKRAANSQKCIRAGGKHNDLEDVGRDSYHHTFFEMLGNWSFGDYFKKEAIGFSWNLL 126

Query: 176 TKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTG 234
              Y L  DRLY +YFGGDEK GL PD +A+  WL   +    +LP   KDNFWEMGD G
Sbjct: 127 VGTYGLDKDRLYVSYFGGDEKQGLDPDLDAKQHWLNIGVAEDHILPGDAKDNFWEMGDQG 186

Query: 235 PCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           PCGPCSEIHYDR G R+AA LVN DDP  +EIWNIVFIQ+NRE D +L+ LPAKH+DTG+
Sbjct: 187 PCGPCSEIHYDRIGGRNAAHLVNMDDPNVLEIWNIVFIQYNREPDSTLRSLPAKHIDTGM 246

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL SILQ+K SNYDTDVF PIFD I++ TG RPY+GK G +D D +D AYRV+ADH+
Sbjct: 247 GFERLVSILQDKSSNYDTDVFTPIFDKIREITGVRPYTGKFGTEDKDGIDTAYRVIADHV 306

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVF 413
           RTL+FAI DG  P NEGR YVLRRILRR  RY  + +    G FF  L  +V++   ++F
Sbjct: 307 RTLTFAITDGGVPNNEGRGYVLRRILRRGSRYVRKYMNYPIGTFFQQLAPVVIEQNKEIF 366

Query: 414 PELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTYG 470
           PE+  +   + EI+  EE SF KTL +G    E++   A     + LSG+D + L+DTYG
Sbjct: 367 PEIAHKSQDLMEILNEEELSFAKTLDRGEKLFEQYSIIASKTPEQTLSGKDVWRLYDTYG 426

Query: 471 FPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR-G 529
           FP+DLT+LMAEE GL +D  GF  A +E+RE S+   +K     + +D  A + L     
Sbjct: 427 FPVDLTRLMAEEAGLSIDEVGFEKAKEESREASKGRNSKSGASLVKLDVHALSELDSNDS 486

Query: 530 VLATDDSFKFIWFQDHKSVIKAIYTGSEFIESV--VPGNEVGIVLASSSFYAEQGGQIFD 587
           +  TDDS+K+    + K+ + AIY G+ F+E V      + GI+L  + FYAEQGGQ +D
Sbjct: 487 IPKTDDSYKY-GLDNIKAKVVAIYDGAGFVEVVSDTTSKQYGILLDRTPFYAEQGGQEYD 545

Query: 588 EG-FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
            G F+      F V NVQ+Y G+V+H G+L EG+    VG+EVI   D  RR  I  NHT
Sbjct: 546 TGKFVIDGQAEFNVENVQVYAGYVLHTGNLVEGS--IKVGDEVIAGYDELRRWPIRNNHT 603

Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD 706
            TH+LN+ALREVLG+ VDQKGS+V PEKLRFDFSH + + PE + ++E I NE IKA   
Sbjct: 604 GTHVLNYALREVLGNSVDQKGSLVAPEKLRFDFSHKQALKPEEVSKVEDISNEYIKANKQ 663

Query: 707 VFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGG 766
           V++KE +LA+AK I GLRAVFGE YPDPVRVV+IG+ V+DLL++P+NK+W   S E CGG
Sbjct: 664 VYAKEVSLADAKQIYGLRAVFGETYPDPVRVVSIGKSVDDLLSNPDNKDWYHFSVEFCGG 723

Query: 767 THLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDAS------- 819
           TH++ T + +   ++ E GIAKGIRRI AVT   A++  + A   EKE+ + +       
Sbjct: 724 THVTKTGDIKDLVIIEESGIAKGIRRIVAVTGTEAHRVQQIAHDNEKELHEINSLPFGPA 783

Query: 820 -------------KIEGSLLEK-------NQVRKA----QKKVAEENLQKAVKVATETAE 855
                        K+  S+ EK       N++ KA     K + +E  +K + V  E  +
Sbjct: 784 KESRAKDFGVNLKKLSISVTEKQKLNEKFNKLDKAIKDNLKAIQKEETKKVMDVVNEWLQ 843

Query: 856 AAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMP---VMVFSTDETTNKAVVCAGVP 912
              +  K F +S V +  +A A+ E  L +I +K  P   + +F     T K  V  G  
Sbjct: 844 DKEA--KNFLVSHVPINSNAKAIAEG-LNLI-KKSHPEKSIYLF-----TGKDKVAHGCY 894

Query: 913 EKSDQ-SKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
             +D   K + V++   A    + G+ G GKG    G G +   V  A++      + KL
Sbjct: 895 ISNDALEKGINVTDLGVAVSSNIGGKAG-GKGNTIQGMGDNVGGVDKAIEELTALLSSKL 953


>gi|448533187|ref|XP_003870578.1| Ala1 alanyl-tRNA synthetase [Candida orthopsilosis Co 90-125]
 gi|380354933|emb|CCG24449.1| Ala1 alanyl-tRNA synthetase [Candida orthopsilosis]
          Length = 968

 Score =  887 bits (2293), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 464/894 (51%), Positives = 591/894 (66%), Gaps = 48/894 (5%)

Query: 57  EWPATKVRDTFFKFFEDK-NHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQ 115
           +W A KVR TF  FF+DK  H    SS VVP NDPTLLFANAGMNQYKPIFLGT DP + 
Sbjct: 21  KWTAPKVRSTFLDFFKDKKQHTYVPSSSVVPHNDPTLLFANAGMNQYKPIFLGTVDPASD 80

Query: 116 LSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELL 175
            +KL RA N+QKCIRAGGKHNDL+DVG+D+YHHTFFEMLGNWSFGDYFK EAI W+WELL
Sbjct: 81  FAKLKRAANSQKCIRAGGKHNDLEDVGRDSYHHTFFEMLGNWSFGDYFKKEAIAWSWELL 140

Query: 176 TKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTG 234
           T+VY L  DRLY TYFGGD+K GL  D EA+  WL   +    +LP   KDNFWEMGD G
Sbjct: 141 TEVYGLEKDRLYVTYFGGDDKQGLEADLEAKQFWLDVGVAEDHILPGDAKDNFWEMGDQG 200

Query: 235 PCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           PCGPCSEIHYDR G R+AASLVN DDP  +E+WN+VFIQ+NRE+DGSL+ LP KH+DTG+
Sbjct: 201 PCGPCSEIHYDRIGGRNAASLVNMDDPNVLEVWNVVFIQYNREADGSLRSLPNKHIDTGM 260

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL SILQNK SNYDTDVF+PIF+ I++ TG RPY+GK G DD D +D AYRV+ADH+
Sbjct: 261 GFERLVSILQNKSSNYDTDVFLPIFEKIREITGVRPYTGKFGTDDKDGIDTAYRVIADHV 320

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVF 413
           RTL+FAI DG  P NEGR YVLRR+LRR  RY  + +    G FF  LV+IV++   ++F
Sbjct: 321 RTLTFAICDGGVPNNEGRGYVLRRVLRRGSRYVRKYMNYPIGSFFPQLVDIVIEQNKEIF 380

Query: 414 PELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTYG 470
           PE++     ++EI+  EE SF KTL +G    E++   A     + LSG+D + L+DTYG
Sbjct: 381 PEIESGSQDLKEILNEEELSFAKTLDRGEKLFEQYAIIASKTPEQTLSGKDVWRLYDTYG 440

Query: 471 FPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGV 530
           FP+DLT+LMAEE GL +D +GF  A +E+RE S+   +K A   I +D  A + L  + V
Sbjct: 441 FPVDLTRLMAEEAGLKIDEKGFEVAKEESREASKGGASKNASSLIKLDVHALSELEGK-V 499

Query: 531 LATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNE---VGIVLASSSFYAEQGGQIFD 587
           + T+DS K+    + K+ + AIY G +F++S+   NE    GI+L  + FYAEQGGQ +D
Sbjct: 500 VKTNDSAKY-GLDNIKASVLAIYDGGKFVDSIQQDNEGKQYGILLDKTPFYAEQGGQEYD 558

Query: 588 EG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            G   I+G    F V NVQ+Y G+V+H G + E  G+ SVG+EVI   D  RR  I  NH
Sbjct: 559 TGKLVIDGK-TEFNVENVQVYAGYVLHTGFVLE--GKLSVGDEVIAAYDELRRWPIRNNH 615

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           T TH+LN+ALREVLGD VDQKGS+V  EKLRFDFSH + + P+ L ++E   N+ I+   
Sbjct: 616 TGTHVLNYALREVLGDDVDQKGSLVAKEKLRFDFSHKQALTPKELEKVEDKSNQYIRDNK 675

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            V+ K+  LAEAK INGLRAVFGE YPDPVRVV+IG  V+DLL DP N+EW S+S E CG
Sbjct: 676 QVYYKDVPLAEAKAINGLRAVFGETYPDPVRVVSIGVPVDDLLKDPTNEEWRSLSIEFCG 735

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDAS------ 819
           GTH++ T E +   ++ E GIAKGIRRI AVT   A+     A     E+D A+      
Sbjct: 736 GTHVAKTSEIKDLVIIEESGIAKGIRRIVAVTGHDAHAVQRIAEEFGDELDHANALPNGP 795

Query: 820 --------------KIEGSLLEK-------NQVRKA----QKKVAEENLQKAVKVATETA 854
                         K+  S+L+K       N+V K+    QK + +E  +K + V  +  
Sbjct: 796 IKENKVKELGVSLKKLSISVLDKQKLTEKFNKVDKSIKDHQKSIQKEESKKTLDVVKKWL 855

Query: 855 EAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVC 908
           +    N   F ++ + +  +A A+ EA   V +Q     +   T +    A  C
Sbjct: 856 D-DGDNKSEFLVAHIPINANAKAITEAFNLVKKQDKTKSLYLLTGQNDKVAHGC 908


>gi|366993787|ref|XP_003676658.1| hypothetical protein NCAS_0E02290 [Naumovozyma castellii CBS 4309]
 gi|342302525|emb|CCC70299.1| hypothetical protein NCAS_0E02290 [Naumovozyma castellii CBS 4309]
          Length = 956

 Score =  886 bits (2290), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 450/885 (50%), Positives = 587/885 (66%), Gaps = 40/885 (4%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           +W A  VR+TF  +F+ K H    SSPVVP +DPTLLFANAGMNQYKPIFLGT DP++  
Sbjct: 8   KWTAQNVRNTFLDYFKSKEHTFVPSSPVVPFDDPTLLFANAGMNQYKPIFLGTVDPSSDF 67

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
             L RA N+QKC+RAGGKHNDL+DVGKD+YHHTFFEMLGNWSFGDYFK EAI +AWELLT
Sbjct: 68  YTLKRAYNSQKCVRAGGKHNDLEDVGKDSYHHTFFEMLGNWSFGDYFKKEAIHYAWELLT 127

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
            VY +PADRLY TYF GD K GL PD+EA+D+W K  +P   +LP   KDNFWEMGD GP
Sbjct: 128 VVYGIPADRLYVTYFEGDAKQGLEPDSEAQDLWRKVGVPEDHILPGNAKDNFWEMGDQGP 187

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPCSEIHYDR G R+A+SLVN DDP  +E+WN+VFIQFNRESDGSLK LPAKH+DTG+G
Sbjct: 188 CGPCSEIHYDRIGGRNASSLVNMDDPDVLEVWNLVFIQFNRESDGSLKSLPAKHIDTGMG 247

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
           FERL S+LQ+  SNYDTDVF P+F  IQ+ T AR Y+GK GA+D D +D AYRV+ADH+R
Sbjct: 248 FERLVSVLQDVRSNYDTDVFQPLFKRIQEITNARDYTGKFGAEDKDNIDTAYRVLADHVR 307

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFP 414
           TL+FA+ADG  P NEGR YVLRRILRR  RY  + +    G FF+ L   +++ + D+FP
Sbjct: 308 TLTFALADGGVPNNEGRGYVLRRILRRGARYARKYMNYPIGDFFSKLAPTLIEQVKDIFP 367

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTYGF 471
           E+ +  A + EI+  EEASF KTL +G    EK+   A + Q K L G+  + L+DTYGF
Sbjct: 368 EVAKDPAFLFEILDEEEASFAKTLDRGERLFEKYAATAAETQSKTLDGKQVWRLYDTYGF 427

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           P+DLT+LMAEE+GL +D  GF  A  E+ E S+    K     I ++    + L+   V 
Sbjct: 428 PVDLTELMAEEQGLKIDGPGFEKAKQESYEASKRGGKKDQSDLIKLNVHELSELNDNNVA 487

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVV-PGNEVGIVLASSSFYAEQGGQIFDEG- 589
            TDDS K+  F++ +S I  ++ G++F++ +   G + G++L  + FYAEQGGQ +D G 
Sbjct: 488 KTDDSAKY-GFENIESTILKLHDGTKFVDEITESGKKYGVLLDKTCFYAEQGGQEYDTGK 546

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
            +      F V NVQ+Y GFV H GSL E  G+ SVG+++I   D  RR  I  NHT TH
Sbjct: 547 LVIDDVAEFNVENVQLYNGFVFHTGSLEE--GKLSVGDKIIASYDELRRFPIKNNHTGTH 604

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +LNFAL E LG+ VDQKGS+V PEKLRFDFSH K +  + LR++E I N+QIK    V+ 
Sbjct: 605 ILNFALLETLGNEVDQKGSLVAPEKLRFDFSHKKALAMDELRKVEEICNQQIKENFPVYY 664

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
           KE  L  AK I  +RAVFGE YPDPVRVV +G+ VE+LL +P ++EW + S E CGGTH+
Sbjct: 665 KEVPLDLAKSIFNVRAVFGETYPDPVRVVCVGKPVEELLKNPTSEEWGNYSIEFCGGTHV 724

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKN 829
             T + + F +L E GIAKGIRRI AVT   A++A   A     E+D A K+  S L++ 
Sbjct: 725 VKTGDIKYFVILEESGIAKGIRRIVAVTGSDAFEAQRIANEFSTELDAAEKLPFSPLKEK 784

Query: 830 QVRK------------------------AQKKVAEENLQKAVKVATETAEA-----AASN 860
           ++++                         +K V +E   +A K A +T +      A + 
Sbjct: 785 KLKELGVSLGQLSISVISKHELKERFTAIEKVVKDEVKSRAKKEAKQTVDEVKNYFAENE 844

Query: 861 GKPFCISRVEVGLDAAAVREAVLKVIEQ-KGMPVMVFSTDETTNK 904
             P+ +  + + ++A A+ EA+  V    KG  + + + +++  K
Sbjct: 845 NSPYFVKFINIPVNAKAITEAINYVKSSAKGKSIYLLTGNDSNGK 889


>gi|326927213|ref|XP_003209787.1| PREDICTED: alanyl-tRNA synthetase, cytoplasmic-like [Meleagris
           gallopavo]
          Length = 968

 Score =  885 bits (2288), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 473/968 (48%), Positives = 625/968 (64%), Gaps = 67/968 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A+++R  F  FF++  H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  L+KL
Sbjct: 7   ASQIRQRFIDFFKENRHTYVHSSSTIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPLAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A + A +LLTK +
Sbjct: 67  SRATNTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKLALDLLTKEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +PA+RLY TYFGG+E AGL PD E + IWL   L   R+LP   KDNFWEMGDTGPCGP
Sbjct: 127 GIPAERLYVTYFGGNEAAGLQPDLECKQIWLDLGLDEGRILPGNMKDNFWEMGDTGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G+RDA+ LVN DDP  +EIWN+VFIQFNRE+DGSLKPLP K +DTG+G ER
Sbjct: 187 CSEIHYDRIGDRDASHLVNQDDPNVLEIWNLVFIQFNREADGSLKPLPKKSIDTGMGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+F+P F+AIQ+ TGARPY G+VGA+DAD +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFLPYFEAIQKGTGARPYMGQVGAEDADGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A++DG  P N GR YVLRRILRRAVRY  E L A  GFF  LV++VV+ +GD FPELK+
Sbjct: 307 LALSDGGRPDNTGRGYVLRRILRRAVRYSHEKLNAPKGFFATLVDVVVQSLGDAFPELKK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
               +++II  EE  F KTL +G     +  Q +   K + G  A++L+DTYGFP+DLT 
Sbjct: 367 DPDMVKDIINEEEDQFLKTLSRGRRILDRKIQSMGDSKTIPGDTAWLLYDTYGFPVDLTG 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
           L+AEE+GL+VD+EGF      A+ +S   Q K AGG   +++D  A   L  RG+  TDD
Sbjct: 427 LIAEEKGLVVDMEGFEEERKNAQLKS---QGKGAGGEDLLMLDIYAIEELRARGLEVTDD 483

Query: 536 SFKFIWFQDHK---------SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           S K+ +  D           + +KAI    +F+E V  G E GIVL  + FYAEQGGQI+
Sbjct: 484 SPKYGYTSDPSGTYDFGSLVATVKAIRREKKFVEEVSTGQECGIVLDRTCFYAEQGGQIY 543

Query: 587 DEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           D+G++     S      F V+NVQ+ GG+V+HIG+L    G   VG++V   +D  RR+ 
Sbjct: 544 DQGYMVKDDDSREDKTEFTVKNVQVRGGYVLHIGTLY---GSLKVGDQVHLSIDETRRRP 600

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           +  NHT TH+LNFALR VLG+  DQ+GS+V P++LRFDF+    +  + ++++E I N+ 
Sbjct: 601 VMSNHTATHILNFALRSVLGE-ADQRGSLVAPDRLRFDFTAKGALSTQEIKKVEGIANQM 659

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I+    V++++  LA AK I GLRAVF E YPDPVRVV+IG  V++LLADP        S
Sbjct: 660 IEEAKTVYARDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGIPVDELLADPSGPAGSITS 719

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSL--------- 811
            E CGGTHL N+  A  F ++SEE IAKGIRRI AVT   A KA     SL         
Sbjct: 720 IEFCGGTHLQNSGHAGPFVIVSEEAIAKGIRRIVAVTGAEARKALRKVESLKKLLSALDA 779

Query: 812 ------------EKEVDDASKIEGSLL----EKNQVR---KAQKKVAEE-------NLQK 845
                       +KE+ D S++  + +    +K+++R   KA KKV ++       ++QK
Sbjct: 780 KVKVQTAPNKDVQKEITDLSEMLATAVIPQWQKDELREAVKALKKVMDDLDRASKADIQK 839

Query: 846 AVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKG--MPVMVFSTDETTN 903
            V   T+    +  N +P  I  +E G  A A+ E+ LK+ +        M+F+ D    
Sbjct: 840 RVLEKTKQVIESHPN-QPLVIMEMENGASAKALNES-LKLFKTHSPQTATMLFAVDNEAG 897

Query: 904 KAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLA 963
           +      VP+++ Q K L+ ++W+      + G+ G GK   A   G +   +  A+ LA
Sbjct: 898 RITCLCQVPQETAQ-KGLKANQWVQEVSALMDGK-GGGKDISAQATGKNVGCLQEALRLA 955

Query: 964 AEFAAMKL 971
            +FA + L
Sbjct: 956 TDFARLHL 963


>gi|320581101|gb|EFW95323.1| Cytoplasmic alanyl-tRNA synthetase [Ogataea parapolymorpha DL-1]
          Length = 954

 Score =  885 bits (2286), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 470/955 (49%), Positives = 607/955 (63%), Gaps = 46/955 (4%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           +W ATKVR+TF  +F+D+ H    SS V+P +DPTLLFANAGMNQYKPIFLGT DP++  
Sbjct: 4   QWTATKVRNTFLDYFKDRGHTFVSSSSVIPHDDPTLLFANAGMNQYKPIFLGTVDPSSSF 63

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
           + L RA N+QKCIRAGGKHNDL+DVG+D+YHHTFFEMLGNWSFGDYFK EAI+++W+LLT
Sbjct: 64  ASLKRAVNSQKCIRAGGKHNDLEDVGRDSYHHTFFEMLGNWSFGDYFKKEAIQYSWDLLT 123

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
            VY L  DRLY TYF GD   GL PD EA+  W    +    +LP   KDNFWEMGD GP
Sbjct: 124 NVYGLNKDRLYVTYFEGDAANGLEPDLEAKQYWKDVGVADDHILPGNAKDNFWEMGDQGP 183

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPCSEIHYDR G R+AASLVN DDP  +EIWN VFIQFNRE DGSLKPLPAKHVDTG+G
Sbjct: 184 CGPCSEIHYDRIGGRNAASLVNQDDPDVLEIWNNVFIQFNREQDGSLKPLPAKHVDTGMG 243

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
           FERL S+LQN  SNYDTDVF P+F  IQ+ TG RPYSGK G DD D +D AYRV+ADH+R
Sbjct: 244 FERLVSVLQNVRSNYDTDVFQPLFSKIQEITGVRPYSGKFGKDDLDGIDTAYRVLADHVR 303

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFP 414
           TL+FA+ADG  P NEGR YVLRRILRR  RY  + +    G FF+ L   +++ + D+FP
Sbjct: 304 TLTFALADGGVPNNEGRGYVLRRILRRGARYVRKYMNYPIGKFFSQLAPTLIEQVKDIFP 363

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTYGF 471
           E+      I EI+  EEASF +TL +G    E++   A     + L+G+D + L+DTYGF
Sbjct: 364 EVATNTDTIFEILDEEEASFARTLDRGEKLFEQYAIIASKTPEQTLAGRDVWRLYDTYGF 423

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAAL-HKRGV 530
           P+DLT+LMAEE GL +D EGF  A   + E S++  +K     + +D     AL   + +
Sbjct: 424 PVDLTRLMAEEAGLNIDEEGFEKARLASLEASKAGGSKSGKTLLKLDVHILGALDSNKDI 483

Query: 531 LATDDSFKFIWFQDHKSVIKAIYTGSEFI---ESVVPGNEVGIVLASSSFYAEQGGQIFD 587
             TDDS+K+   QD K+ I  IY G E +   E    G ++G++L  + FYAEQGGQ +D
Sbjct: 484 PVTDDSYKY-GNQDIKTKIVGIYNGKELLGSTEGTEAGQQLGVLLEKTPFYAEQGGQEYD 542

Query: 588 EG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            G   I+G+   F V NVQ Y G+V+H G + E  G+FSVG++VI   D  RR  I  NH
Sbjct: 543 TGKIVIDGV-AEFEVENVQSYAGYVLHTGHVVE--GKFSVGDQVIAGYDELRRWPIRNNH 599

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           T TH+LN ALRE+LGD VDQKGS+V  EKLRFDFS+   V  E L +IE+I N+ IK  +
Sbjct: 600 TGTHILNLALREILGDGVDQKGSLVAAEKLRFDFSNKAAVTLEQLEKIEAICNKIIKDSM 659

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            V+SK   L  AK I GLRAVFGE YPDPVRVV+IG  VE+LLA P+NKEW   S E CG
Sbjct: 660 PVYSKPVALNVAKSIYGLRAVFGETYPDPVRVVSIGVPVEELLAKPDNKEWYDYSVEFCG 719

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKI---- 821
           GTH++ T + +   ++ E GIAKGIRRI AVT   A++    A   ++++D   K+    
Sbjct: 720 GTHVAKTSDIKELVIVEESGIAKGIRRIVAVTGTEAHEVQRIAKEFDEQLDAIEKMPFGE 779

Query: 822 --EGSLLEKNQ---------VRKAQKKVAEENLQKAVKVATETAEAAASN---------- 860
             E  L E +          ++KAQ K     + KAVK   +  + A +           
Sbjct: 780 AKEKKLKETSTKLGQLSISVLQKAQLKDKFAKIDKAVKDEVKARQKADTKKALDAVKEFF 839

Query: 861 ----GKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSD 916
                 PF +  +++  +A  + E +  +I+++     +F      + A V  GV    +
Sbjct: 840 AEHEDAPFLVKHIDISANAKIITETI-NMIKKENKEKSLFLITGQKDDARVAQGVYISDE 898

Query: 917 QSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
              +++ +E    A   + G+ G GKG +  G GT+AAQ+  A+    +    KL
Sbjct: 899 HLGKVQATEVANVAASYIGGKAG-GKGNVCQGMGTEAAQIDKAISAVEKLLESKL 952


>gi|426242177|ref|XP_004014951.1| PREDICTED: alanine--tRNA ligase, cytoplasmic isoform 1 [Ovis aries]
 gi|426242179|ref|XP_004014952.1| PREDICTED: alanine--tRNA ligase, cytoplasmic isoform 2 [Ovis aries]
          Length = 968

 Score =  884 bits (2284), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 470/967 (48%), Positives = 613/967 (63%), Gaps = 65/967 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R  F  FF+   H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  ++KL
Sbjct: 7   AGEIRQRFIDFFKRNEHTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A + A ELLT+ +
Sbjct: 67  SRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +P +RLY TYFGGDE AGL PD E + IW    L  SR+LP   KDNFWEMGDTGPCGP
Sbjct: 127 GIPVERLYVTYFGGDEAAGLEPDLECKQIWQNLGLDDSRILPGSMKDNFWEMGDTGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G RDAA LVN DDP  +EIWN+VFIQ+NRE+DG LKPLP K +DTG+G ER
Sbjct: 187 CSEIHYDRVGGRDAAHLVNQDDPNVLEIWNLVFIQYNRETDGILKPLPKKSIDTGMGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+F+P F+AIQ+ TGARPY+GKVGA+DAD +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A++DG  P N GR YVLRRILRRAVRY  E L A  GFF  LV++VV+ +GD FPELK+
Sbjct: 307 VALSDGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRGFFATLVDVVVQSLGDAFPELKK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
               +++II  EE  F KTL +G     +  Q +   K + G  A++L+DTYGFP+DLT 
Sbjct: 367 DPDMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTA 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSR-SAQNKQAGGA--IVMDADATAALHKRGVLATD 534
           L+AEE+GL+VD++GF    DE R+ ++  +Q K AGG   I++D  A   L ++G+ ATD
Sbjct: 427 LIAEEKGLVVDMDGF----DEERKLAQLKSQGKGAGGEDLIMLDIYAIEELREKGLEATD 482

Query: 535 DSFKFIWFQDHK---------SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
           DS K+ +  D           + + A+     F+E V  G E G+VL  + FYAEQGGQI
Sbjct: 483 DSPKYSYHSDSNGTYVFESAVATVMALRRDKMFVEEVSTGQECGVVLDKTCFYAEQGGQI 542

Query: 586 FDEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRK 639
           +DEG++  +  S      F V+N Q+ GG+V+HIG+L    G   VG++V   +D  RR+
Sbjct: 543 YDEGYLVKVDDSSEDKTEFTVKNTQVRGGYVLHIGTLY---GSLKVGDQVRLFIDEPRRR 599

Query: 640 LIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNE 699
            +  NHT TH+LNFALR VLG+  DQ+GS+V P++LRFDF+    +  + ++R E I NE
Sbjct: 600 PVMSNHTATHILNFALRSVLGE-ADQRGSLVAPDRLRFDFTAKGAMSTQQIKRAEEIANE 658

Query: 700 QIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSI 759
            I+A   V++++ +LA AK I GLRAVF E YPDPVRVV+IG  V +LL DP        
Sbjct: 659 MIEAAKPVYTEDCSLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLT 718

Query: 760 SAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDA- 818
           S E CGGTHL N+  A  F ++SEE IAKGIRRI AVT   A KA   A SL+K +    
Sbjct: 719 SVEFCGGTHLQNSSHAGVFVIVSEEAIAKGIRRIVAVTGAEAQKALRKAESLKKSLSVME 778

Query: 819 SKIEGSLLEKNQVRKA----------------QKKVAEENLQKAVKVATETAEAA----- 857
           +K++        V++                 QK    ENL+   KV  +   A+     
Sbjct: 779 AKVKAQTAPNKDVQREIADLGEALATAIIPQWQKDEFRENLKSLKKVMDDLDRASKADVQ 838

Query: 858 ------------ASNGKPFCISRVEVGLDAAAVREAV-LKVIEQKGMPVMVFSTDETTNK 904
                       +S  +P  I  VE G  A A+ EA+ L  +       M+F+ D    +
Sbjct: 839 KRVLEKTKQLIDSSPNQPLVILEVESGASAKALNEALKLFKMHSPQTSAMLFTVDNEAGR 898

Query: 905 AVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAA 964
                 VP+ +  ++ L+ SEW+      + G+ G GK   A   G +   +  A+ LA 
Sbjct: 899 ITCLCQVPQNA-ANRGLKASEWVQQVSGLMDGK-GGGKDVSAQATGKNVGCLQEALQLAT 956

Query: 965 EFAAMKL 971
            FA ++L
Sbjct: 957 SFAQLRL 963


>gi|149699352|ref|XP_001501062.1| PREDICTED: alanyl-tRNA synthetase, cytoplasmic [Equus caballus]
          Length = 968

 Score =  884 bits (2284), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 469/970 (48%), Positives = 619/970 (63%), Gaps = 71/970 (7%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A+++R  F  FF+   H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  ++KL
Sbjct: 7   ASEIRQRFIDFFKRNEHTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A + A ELLT+ +
Sbjct: 67  SRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +P +RLY TYFGGDE AGL PD E + IW    L  +++LP   KDNFWEMGDTGPCGP
Sbjct: 127 GIPIERLYVTYFGGDEAAGLEPDLECKQIWQNLGLDDTKILPGNMKDNFWEMGDTGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G RDAA LVN DDP  +EIWN+VFIQ+NRE+DG LKPLP K +DTG+G ER
Sbjct: 187 CSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNRETDGVLKPLPKKSIDTGMGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+F+P F+AIQ+ TGARPY+GKVGADDAD +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYAGKVGADDADGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY  E L A  GFF  LV++VV+ +GD FPELK+
Sbjct: 307 VALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRGFFATLVDVVVQSLGDAFPELKK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
               +++II  EE  F KTL +G     +  Q + + K + G  A++L+DTYGFP+DLT 
Sbjct: 367 DPDMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGESKTIPGDTAWLLYDTYGFPVDLTG 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
           L+AEE+GL+VD++GF      A+ +S   Q K AGG   I++D  A   L ++G+ ATDD
Sbjct: 427 LIAEEKGLVVDMDGFEEERKLAQLKS---QGKGAGGEDLIMLDIYAIEELREKGLEATDD 483

Query: 536 SFKFIWFQDHK---------SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           S K+ ++ D           + + A+     F+E V  G E G+VL  + FYAEQGGQI+
Sbjct: 484 SPKYNYYSDSSGSYVFESAVATVMALRRDKMFVEEVSTGQECGVVLDKTCFYAEQGGQIY 543

Query: 587 DEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           DEG++  +  S      F V+N Q+ GG+V+HIG++    G   VG++V   +D  RR+ 
Sbjct: 544 DEGYLVKVDDSSEDKTEFTVKNAQVRGGYVLHIGTIY---GNLKVGDQVRLFIDEPRRRP 600

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           +  NHT TH+LNFALR VLG+  DQ+GS+V P++LRFDF+    +  + +++ E I NE 
Sbjct: 601 VMSNHTATHILNFALRSVLGE-ADQRGSLVAPDRLRFDFTAKGAMSTQQIKKAEEIANEM 659

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I+A   V++++ +LA AK I GLRAVF E YPDPVRVV+IG  V +LL DP        S
Sbjct: 660 IEAAKPVYTQDCSLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTS 719

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK 820
            E CGGTHL N+  A AF ++SEE IAKGIRRI AVT   A KA   A SL+K +   S 
Sbjct: 720 VEFCGGTHLQNSSHAGAFVIVSEEAIAKGIRRIVAVTGAEAQKALRKAESLKKSL---SV 776

Query: 821 IEGSLLEKNQVRK-AQKKVAE-------------------ENLQKAVKVATETAEAAASN 860
           +EG +  +    K  Q+++A+                   ENL+   K+  +   A+ ++
Sbjct: 777 MEGKVKAQTAPNKDVQREIADLGEALATAVIPQWQKDEFRENLKSLKKIMDDLDRASKAD 836

Query: 861 -----------------GKPFCISRVEVGLDAAAVREAVLKVIEQKG--MPVMVFSTDET 901
                             +P  I  +E G  A A+ EA LK+ +        M+F+ D  
Sbjct: 837 VQKRVLEKTKQLIDSNPNQPLVILEMESGASAKALNEA-LKLFKTHSPQTSAMLFTVDNE 895

Query: 902 TNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMD 961
             K      VP+ +  ++ L+ SEW+      + G+ G GK   A   G +   +  A+ 
Sbjct: 896 AGKITCLCQVPQNA-ANRGLKASEWVQQVSGLMDGK-GGGKDVSAQATGKNVGCLQEALQ 953

Query: 962 LAAEFAAMKL 971
           LA  FA ++L
Sbjct: 954 LATSFAQLRL 963


>gi|327281303|ref|XP_003225388.1| PREDICTED: alanyl-tRNA synthetase, cytoplasmic-like [Anolis
           carolinensis]
          Length = 969

 Score =  883 bits (2281), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 475/971 (48%), Positives = 628/971 (64%), Gaps = 72/971 (7%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A+++R  F  FF +  H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  ++KL
Sbjct: 7   ASEIRQRFINFFVENQHTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A ++A +LLTK +
Sbjct: 67  SRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKFALDLLTKEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +P +RLY TYFGG+E AGL PD + + IWL   LP  R+LP   KDNFWEMGDTGPCGP
Sbjct: 127 GIPIERLYVTYFGGNEAAGLQPDLDCKQIWLDLGLPEDRILPGSMKDNFWEMGDTGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSE+HYDR G RDA+ LVN DDP  +EIWN+VFIQFNRE+DG+LKPLP K +DTG+G ER
Sbjct: 187 CSEMHYDRIGGRDASHLVNQDDPNVLEIWNLVFIQFNREADGTLKPLPKKSIDTGMGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+F+P F+AIQ+ TG RPY+G+VG DDAD +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFVPYFEAIQKGTGCRPYTGQVGEDDADGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A++DG  P N GR YVLRRILRRAVRY  E L A  GFF  LV++VV+ +G  FPELK+
Sbjct: 307 VALSDGGRPDNTGRGYVLRRILRRAVRYAHEKLNAPRGFFATLVDVVVESLGGAFPELKK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
               +++II  EE  F KTL +G     +  Q +   KV+ G  A++L+DTYGFP+DLT 
Sbjct: 367 DPEMVKDIINEEEVQFLKTLNRGRRILDRKIQSLGDNKVIPGDTAWLLYDTYGFPVDLTG 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGG---AIVMDADATAALHKRGVLATD 534
           L+AEE+GL VD+EGF    +E R+ ++     + GG    I++D  A   L  +G+ ATD
Sbjct: 427 LIAEEKGLKVDMEGF----EEERKAAQLKSQGKGGGDEDLIILDIYAIEELRSKGLKATD 482

Query: 535 DSFKFIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
           DS K+ +         FQ   + +KA+     F+E V  G E GIVL  + FYAEQGGQI
Sbjct: 483 DSLKYNYASDPSGTYEFQSPVATVKALRREKVFVEEVSTGQECGIVLDQTCFYAEQGGQI 542

Query: 586 FDEGFI--EGLFGS-----FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRR 638
           +DEG++  E   GS     F V+NVQ+ GG+V+H+G++    G   VG+ V   +D  RR
Sbjct: 543 YDEGYLVKEEDEGSEDKTEFTVKNVQVRGGYVLHVGTVY---GSLKVGDTVRLYIDEPRR 599

Query: 639 KLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVN 698
           + +  NHT TH+LNFALR VLG+  DQ+GS+V P++LRFDF+    +  + +++ E+IVN
Sbjct: 600 RPVMSNHTATHILNFALRAVLGE-ADQRGSLVAPDRLRFDFTAKGAMSTQEIKKAEAIVN 658

Query: 699 EQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLS 758
           + I+    V++KE  LA AK I GLRAVF E YPDPVRVV+IG  +ED+LADP N     
Sbjct: 659 QMIQEAKVVYAKECALAAAKAIQGLRAVFDETYPDPVRVVSIGIPIEDMLADPSNAAGAI 718

Query: 759 ISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDD- 817
            S E CGGTHL N+  A  F ++SEE IAKGIRRI AVT   A KA     SL+K + D 
Sbjct: 719 TSVEFCGGTHLQNSSHAGHFVIVSEEAIAKGIRRIVAVTGAEAQKALRKVESLKKLLADL 778

Query: 818 ASKIE----------------GSLL--------EKNQVR---KAQKKVAEE-------NL 843
            +K++                G  L        +K+++R   KA KK+ ++       ++
Sbjct: 779 EAKVKVQTAPNKDVQHEIADLGESLATAVIPQWQKDELRESLKALKKIMDDLDRACKADI 838

Query: 844 QKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKG--MPVMVFSTDET 901
           QK V    +    A  N +P  I  +E G  A A+ E+ LK+++        M+F+ D  
Sbjct: 839 QKRVLDKMKQLIEAHPN-QPLVILEMESGASAKALNES-LKLLKTHSPETAAMLFTVDND 896

Query: 902 TNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGR-CGKGKGGLASGQGTDAAQVTPAM 960
             K      VP+    SK L+ SEW+      + G+  GK     A+G+ TD   +  A+
Sbjct: 897 AGKITCLCQVPQDV-VSKGLKASEWVQQVSGLMDGKGGGKDLSAQATGKNTDC--LKEAL 953

Query: 961 DLAAEFAAMKL 971
           ++A +FA +KL
Sbjct: 954 EVATDFAKLKL 964


>gi|322783659|gb|EFZ10997.1| hypothetical protein SINV_01057 [Solenopsis invicta]
          Length = 952

 Score =  882 bits (2280), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 467/948 (49%), Positives = 617/948 (65%), Gaps = 46/948 (4%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R  +  FF+ K H    SS  +P +DP+LLF NAGMNQ+KPIFLGT DPN+ ++K 
Sbjct: 7   AKQIRQAYIDFFKSKGHEYVHSSSTIPHDDPSLLFTNAGMNQFKPIFLGTVDPNSDMAKW 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  N+QKCIRAGGKHNDLDDVGKD YHHTFFEM+GNWSFGDYFK E   WAWE LT V 
Sbjct: 67  VRVVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMMGNWSFGDYFKKEICAWAWEFLTDVL 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
           +LPADRLY TYFGGD K+GLAPD+E +D+WL   +PAS VLP   KDNFWEMG+TGPCGP
Sbjct: 127 KLPADRLYVTYFGGDMKSGLAPDDECKDLWLSLGIPASHVLPGNMKDNFWEMGETGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSE+HYDR G R+AA LVN DDP  +EIWN+VFIQ+NRE DGSLKPLP KH+D GLG ER
Sbjct: 187 CSELHYDRIGGREAAHLVNMDDPDVLEIWNLVFIQYNREPDGSLKPLPKKHIDCGLGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S++Q+K +NYDTD+FMP+FDAI++ TGA PY GK+GADD D +DMAYRV+ADH RT++
Sbjct: 247 LISVIQDKRANYDTDLFMPLFDAIEKGTGAPPYKGKIGADDVDGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY +E L A+ GFF  LVN+VV+++GDVFPE+K+
Sbjct: 307 IALADGGMPDNTGRGYVLRRILRRAVRYATEKLNAKPGFFGSLVNVVVELLGDVFPEVKR 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG-KVLSGQDAFILWDTYGFPLDLTQ 477
               I EII  EE  F KTL +G     +    ++   V+ G  A+ L+DTYGFP+DLTQ
Sbjct: 367 DPQSIIEIINEEEIQFLKTLSRGRNLLNRTIAKLESTNVVPGDVAWRLYDTYGFPIDLTQ 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA---IVMDADATAALHKRGVLATD 534
           LM EE+GL +D+ G+    +EA+++++     +AGG    I +D  A   L  +GV  TD
Sbjct: 427 LMTEEKGLKIDMTGY----EEAKKQAQLISQNKAGGVDDQINLDVHAITELQNQGVKPTD 482

Query: 535 DSFKFIW------------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQG 582
           DS K+ +            F      + A+     F++ V  G EVGI+L  ++FYAEQG
Sbjct: 483 DSPKYDYKVTNTVQYNEYDFAPCTGTVIALRRAKAFVDEVSSGEEVGILLDRTNFYAEQG 542

Query: 583 GQIFDEGF---IEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRK 639
           GQIFDEGF   ++       V+NVQ+  G+V+HIG++  G G+   G++V   VD  RR+
Sbjct: 543 GQIFDEGFLVKVDDEATEIRVKNVQVRAGYVLHIGTV--GEGKLRKGDKVHTNVDTKRRR 600

Query: 640 LIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNE 699
            +  NH+ TH LN+ALR+VLG   DQKGS+V P++LRFDF++  P+  + L   E    E
Sbjct: 601 FVMANHSATHALNYALRKVLGTEADQKGSLVAPDRLRFDFTNKGPMTTKQLLDTEVATQE 660

Query: 700 QIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSI 759
            IK    +++KE++LA AK I GLRA+F E YPDPVRVV++G  VE L +DP +K  L  
Sbjct: 661 MIKDNKQIYTKESSLAIAKTIQGLRAMFEETYPDPVRVVSMGVSVEKLESDPLSKAALET 720

Query: 760 SAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---- 815
           S E CGGTHL  T     F + SE+ IAKGIRRI A+T   A KA   +  L++++    
Sbjct: 721 SVEFCGGTHLHYTAHIGDFVIASEDAIAKGIRRIVALTGPEATKALRTSTLLQQQILALK 780

Query: 816 DDASKIEGSLLEKNQVRKAQK--KVAEENLQKAVK--VATETAEAAAS--NGKPFCISRV 869
           +  +  E ++ E + +R   K  K + ++ ++A K  VAT   + A S     P C   V
Sbjct: 781 EMIANSEINVKECDNMRNTLKDLKKSLDDKERAAKAAVATSVVQTAQSIIESNPECKVLV 840

Query: 870 EVGLDAAAVREAV------LKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEV 923
           EV ++A +  +A+      +K I Q+    M+ S D   NK    + V  KS   + L+ 
Sbjct: 841 EV-MEAYSNTKALDLALKKIKAISQE-TSAMLISVDHNVNKIYALSSV-SKSGIDEGLKA 897

Query: 924 SEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           +EW+ A +  +KG+ G GK   A   GT+ A +   +  A EFA  KL
Sbjct: 898 NEWVQAIVPLMKGK-GGGKAESAQASGTNIACLNEIVSKAKEFANQKL 944


>gi|365987223|ref|XP_003670443.1| hypothetical protein NDAI_0E03830 [Naumovozyma dairenensis CBS 421]
 gi|343769213|emb|CCD25200.1| hypothetical protein NDAI_0E03830 [Naumovozyma dairenensis CBS 421]
          Length = 956

 Score =  881 bits (2277), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 457/946 (48%), Positives = 598/946 (63%), Gaps = 52/946 (5%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           +W A +VR+TF  +F+ KNH    SSPVVP +DPTLLFANAGMNQYKPIFLGT DP++  
Sbjct: 8   KWTAVQVRNTFLDYFKSKNHKFIPSSPVVPFDDPTLLFANAGMNQYKPIFLGTVDPSSDF 67

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
             L RA N+QKC+RAGGKHNDL+DVGKD+YHHTFFEMLGNWSFGDYFK EAI +AW+LLT
Sbjct: 68  YTLKRAYNSQKCVRAGGKHNDLEDVGKDSYHHTFFEMLGNWSFGDYFKTEAINYAWDLLT 127

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
            VY +P DRLY TYF GD K GL PD EA+++W K  +P   +LP   KDNFWEMGD GP
Sbjct: 128 NVYGIPKDRLYVTYFEGDAKQGLEPDTEAQELWKKVGVPEDHILPGNAKDNFWEMGDQGP 187

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPCSEIHYDR G R+AA LVN DDP  +E+WN+VFIQFNRES+G LK LPAKH+DTG+G
Sbjct: 188 CGPCSEIHYDRIGGRNAAQLVNQDDPDVLEVWNLVFIQFNRESNGELKSLPAKHIDTGMG 247

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
           FERL S+LQ+  SNYDTDVF P+F  IQ+ TGAR Y+GK G +D D +D AYRV+ADH+R
Sbjct: 248 FERLVSVLQDVRSNYDTDVFQPLFKRIQEITGARDYTGKFGDEDKDNIDTAYRVLADHVR 307

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFP 414
           TL FA+ADG  P NEGR YVLRRILRR  RY  + +    G FF+ L   ++  +  +FP
Sbjct: 308 TLMFALADGGVPNNEGRGYVLRRILRRGARYARKYMNYPIGNFFSTLAPTLIDQVKHIFP 367

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTYGF 471
           E+ +  + + EI+  EEASF KTL +G    EK+  AA   + K L G+  + L+DTYGF
Sbjct: 368 EIAKDPSFLFEILDEEEASFAKTLDRGERLFEKYAAAASQTESKTLDGKQVWRLYDTYGF 427

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           P+DLT+LMAEE+ L +D  GF  A  E+ E S+    K  G  I +D    + L+   V 
Sbjct: 428 PVDLTELMAEEQNLKIDGPGFEKAKQESYEASKRGGKKDNGDLIKLDVHQLSELNDNNVP 487

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVP-GNEVGIVLASSSFYAEQGGQIFDEG- 589
            TDD+ K+   ++ +S I  I+ G+ F++S+   G + GI+L  + FYAEQGGQ +D G 
Sbjct: 488 KTDDNAKY-GTENIESTILRIHDGTNFVDSITEVGKKYGIILDKTCFYAEQGGQEYDTGK 546

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
            +      F V NVQ+Y GFV H GSL E  G+ SVG+++I   D  RR  I  NHT TH
Sbjct: 547 IVIDDAAEFNVENVQLYNGFVFHTGSLEE--GKLSVGDKIIASYDELRRFPIKNNHTGTH 604

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +LN AL+E LG  VDQKGS+V PEKLRFDFSH K +  + LR++E I NEQIK  L V+ 
Sbjct: 605 ILNLALKETLGADVDQKGSLVNPEKLRFDFSHKKALTTDELRKVEDISNEQIKENLIVYY 664

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
           K+  L +AK IN +RAVFGE YPDPVRVV +G+ +++LLADP N+EW   S E CGGTH+
Sbjct: 665 KDVPLEQAKSINNVRAVFGETYPDPVRVVCVGKPIDELLADPTNEEWNKYSIEFCGGTHV 724

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLE-- 827
           + T + + F +L E GIAKGIRRI AVT   A++A   A     E++ A K+  S L+  
Sbjct: 725 AKTGDIKYFVVLEESGIAKGIRRIVAVTGSEAFEAQRIANEFASELETAEKLPFSPLKEK 784

Query: 828 ---------------------------------KNQVRKAQKKVAEENLQKAVKVATETA 854
                                            K++V+   KK A++ L +     TE A
Sbjct: 785 KLKELGVKLGQLSISVINKHELKEKFTAIEKVVKDEVKSRAKKEAKQTLDEVKTYFTENA 844

Query: 855 EAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEK 914
           +A      P+ +  +++ ++A A+ EA+  +        +   T   +N  +        
Sbjct: 845 DA------PYFVKFIDIPVNAKAITEAINYIKSSAKDKSIYLLTGNDSNGKIAHGCYISD 898

Query: 915 SDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAM 960
           +  +K ++ +         + G+ G GKG +  G G      T A+
Sbjct: 899 AALAKGVDGAVLAKQVSNVIGGKAG-GKGNVFQGMGDKPDAATEAV 943


>gi|155371881|ref|NP_001094545.1| alanyl-tRNA synthetase, cytoplasmic [Bos taurus]
 gi|151553989|gb|AAI48084.1| AARS protein [Bos taurus]
 gi|296478238|tpg|DAA20353.1| TPA: alanyl-tRNA synthetase [Bos taurus]
          Length = 968

 Score =  880 bits (2275), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 470/967 (48%), Positives = 612/967 (63%), Gaps = 65/967 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R  F  FF+   H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  ++KL
Sbjct: 7   AGEIRQRFIDFFKRNEHTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A + A ELLT+ +
Sbjct: 67  SRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +P +RLY TYFGGDE AGL PD E + IW    L  SR+LP   KDNFWEMGDTGPCGP
Sbjct: 127 GIPVERLYVTYFGGDEAAGLEPDLECKQIWQNLGLDDSRILPGNMKDNFWEMGDTGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G RDAA LVN DDP  +EIWN+VFIQ+NRE+DG LKPLP K +DTG+G ER
Sbjct: 187 CSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNRETDGILKPLPKKSIDTGMGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+F+P F+AIQ+ TGARPY+G+VGA+DAD +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGRVGAEDADGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY  E L A  GFF  LV++VV+ +GD FPELK+
Sbjct: 307 VALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRGFFATLVDVVVQSLGDAFPELKK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
               +++II  EE  F KTL +G     +  Q +   K + G  A++L+DTYGFP+DLT 
Sbjct: 367 DPDMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTA 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSR-SAQNKQAGGA--IVMDADATAALHKRGVLATD 534
           L+AEE+GL+VD++GF    DE R+ ++  +Q K AGG   I++D  A   L ++G+ ATD
Sbjct: 427 LIAEEKGLVVDMDGF----DEERKLAQLKSQGKGAGGEDLIMLDIYAIEELREKGLEATD 482

Query: 535 DSFKFIWFQDHK---------SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
           DS K+ +  D           + + A+     F+E    G E G+VL  + FYAEQGGQ 
Sbjct: 483 DSPKYSYHSDSSGTYVFESAVATVMALRRDRMFVEEASTGQECGVVLDKTCFYAEQGGQT 542

Query: 586 FDEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRK 639
           +DEG++  +  S      F V+N Q+ GG+V+HIG+L    G   VG++V   +D  RR+
Sbjct: 543 YDEGYLVKVDDSSEDKTEFTVKNTQVRGGYVLHIGTLY---GSLKVGDQVRLFIDEPRRR 599

Query: 640 LIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNE 699
            +  NHT TH+LNFALR VLG+  DQ+GS+V P++LRFDF+    +  + +++ E I NE
Sbjct: 600 PVMSNHTATHILNFALRSVLGE-ADQRGSLVAPDRLRFDFTAKGAMSTQQIKKAEEIANE 658

Query: 700 QIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSI 759
            I+A   V++++ +LA AK I GLRAVF E YPDPVRVV+IG  V +LL DP        
Sbjct: 659 MIEAAKPVYTEDCSLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLT 718

Query: 760 SAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---- 815
           S E CGGTHL N+  A AF ++SEE IAKGIRRI AVT   A KA   A SL+K +    
Sbjct: 719 SVEFCGGTHLQNSSHAGAFVIVSEEAIAKGIRRIVAVTGAEAQKALRKAESLKKSLCVVE 778

Query: 816 -----------DDASKIE--GSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAA----- 857
                      D   +I   G  L    + + QK    ENL+   KV  +   A+     
Sbjct: 779 AKVKAQAAPNKDVQREIADLGEALATAIIPQWQKDEFRENLKSLKKVMDDLDRASKADVQ 838

Query: 858 ------------ASNGKPFCISRVEVGLDAAAVREAV-LKVIEQKGMPVMVFSTDETTNK 904
                       +S  +P  I  VE G  A A+ EA+ L  +       M+F+ D    +
Sbjct: 839 KRVLEKTKQLIDSSPNQPLVILEVESGASAKALNEALKLFKMHSPQTSAMLFTVDNEAGR 898

Query: 905 AVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAA 964
                 VP+ +  ++ L+ SEW+      + G+ G GK   A   G +   +  A+ LA 
Sbjct: 899 ITCLCQVPQNA-ANRGLKASEWVQQVSGLMDGK-GGGKDVSAQATGKNVGCLQEALQLAT 956

Query: 965 EFAAMKL 971
            FA ++L
Sbjct: 957 SFAQLRL 963


>gi|348572772|ref|XP_003472166.1| PREDICTED: alanyl-tRNA synthetase, cytoplasmic-like [Cavia
           porcellus]
          Length = 968

 Score =  880 bits (2275), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 472/967 (48%), Positives = 618/967 (63%), Gaps = 65/967 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A+++R+ F  FF+   H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  L+KL
Sbjct: 7   ASEIRERFIDFFKRNEHTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPLAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A + A ELLT+ +
Sbjct: 67  SRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +P DRLY TYFGGDE AGL PD E + IW    L  +++LP   KDNFWEMGDTGPCGP
Sbjct: 127 GIPVDRLYVTYFGGDEAAGLEPDLECKQIWQNLGLDDTKILPGNMKDNFWEMGDTGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G RDAA LVN DDP  +EIWN+VFIQ+NRE+DG+LKPLP K +DTG+G ER
Sbjct: 187 CSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNRETDGTLKPLPKKSIDTGMGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+F+P F+AIQ+ TGARPY+GKVGA+DAD +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY  E L A  GFF  LV++VV+ +GD FPELK+
Sbjct: 307 VALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRGFFATLVDVVVQSLGDAFPELKK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
               +++II  EE  F KTL +G     +  Q +   K + G  A++L+DTYGFP+DLT 
Sbjct: 367 DPDMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDCKTIPGDTAWLLYDTYGFPVDLTG 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
           L+AEE+GL+VD++GF      A+ +S     K AGG   I++D  A   L  +G+ ATDD
Sbjct: 427 LIAEEKGLVVDMDGFEEERKLAQLKS---HGKGAGGEDLIMLDIYAIEELRAKGLEATDD 483

Query: 536 SFKFIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           S K+ +         F+   + + A+     F+E V  G E G+VL  + FYAEQGGQI+
Sbjct: 484 SPKYDYHSDSGGSYVFESAVATVLALRREKMFVEEVSTGQECGVVLDKTCFYAEQGGQIY 543

Query: 587 DEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           DEG++  +  S      F V+N Q+ GG+V+HIG++    G   VG++V   +D  RR+ 
Sbjct: 544 DEGYLVKVDDSSEDKTEFTVKNTQVRGGYVLHIGTIY---GSLKVGDQVRLFIDEPRRRP 600

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           I  NHT TH+LNFALR VLG+  DQKGS+V P++LRFDF+    +  + +++ E I NE 
Sbjct: 601 IMSNHTATHILNFALRSVLGE-ADQKGSLVAPDRLRFDFTAKGAMSTQQIKKAEEIANEM 659

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I+A   V++++  LA AK I GLRAVF E YPDPVRVV+IG  V +LL DP        S
Sbjct: 660 IEAAKPVYTQDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTS 719

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEK------- 813
            E CGGTHL N+  A AF +++EE IAKGIRRI AVT   A KA   A SL K       
Sbjct: 720 VEFCGGTHLQNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKAESLSKSLSAMES 779

Query: 814 --------------EVDDASKIEGSLL----EKNQVRKAQKKVAE--ENLQKAVK----- 848
                         E+ D  +   S +    +K+++R+  K + +  ++L +A K     
Sbjct: 780 TVKAQTAPNKDVQREIADLGEALASAVIPQWQKDELRETLKSLKKVMDDLDRASKADVQK 839

Query: 849 -VATETAEAAASN-GKPFCISRVEVGLDAAAVREAVLKVIEQKG--MPVMVFSTDETTNK 904
            V   T +   SN  +P  I  +E G  A A+ EA LK+ +        M+F+ D    K
Sbjct: 840 RVLERTKQLIDSNPNQPLVILEMESGASAKALNEA-LKLFKTHSPETSAMLFTVDNEAGK 898

Query: 905 AVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAA 964
                 VP+ +  ++ L+ SEW+      + G+ G GK   A   G +   +  A+ LA 
Sbjct: 899 ITCLCQVPQNA-ANRGLKASEWVQQVSGLMDGK-GGGKDMSAQATGKNVGCLQEALQLAT 956

Query: 965 EFAAMKL 971
            FA ++L
Sbjct: 957 SFAQLRL 963


>gi|224001280|ref|XP_002290312.1| alanine-trna ligase [Thalassiosira pseudonana CCMP1335]
 gi|220973734|gb|EED92064.1| alanine-trna ligase [Thalassiosira pseudonana CCMP1335]
          Length = 966

 Score =  880 bits (2275), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 490/932 (52%), Positives = 616/932 (66%), Gaps = 69/932 (7%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           EWP  KVR TF  +FE   H  W+SSP VP +DPTLLF NAGMNQYKP+FLGT DP  ++
Sbjct: 13  EWPMDKVRSTFISYFERNGHTFWRSSPCVPHDDPTLLFTNAGMNQYKPLFLGTCDPALKM 72

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
           + L RA N+QKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFGDYFK EAIE AW+ LT
Sbjct: 73  ASLKRATNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKEAIEMAWKCLT 132

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPC 236
           + ++L  +RLYATYFGGDE      D+EAR+IWL++LPA RVLPF  KDNFWEMG TGPC
Sbjct: 133 EEFKLDPNRLYATYFGGDESTPC--DDEAREIWLQYLPAERVLPFDAKDNFWEMGATGPC 190

Query: 237 GPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGF 296
           GPC+EIHYDR GNRDA+ LVN D P  IEIWN VFIQFNRE+DGSL+PLPA+HVDTG+GF
Sbjct: 191 GPCTEIHYDRIGNRDASKLVNADLPDVIEIWNNVFIQFNREADGSLRPLPAQHVDTGMGF 250

Query: 297 ERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRT 356
           ERLTSILQ   SNYDTD+F+P+FDAIQ+ TGARPY+GK+  +D + +DMAYRVVADH+RT
Sbjct: 251 ERLTSILQGVDSNYDTDIFIPLFDAIQKITGARPYAGKIEKEDPEFIDMAYRVVADHVRT 310

Query: 357 LSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPEL 416
           LSFAIADG+ P N+GR YVLRR+LRRAVRYG + L A+ GFF  LV  +V++MGD FPEL
Sbjct: 311 LSFAIADGAVPSNDGRGYVLRRVLRRAVRYGRQNLNAELGFFAQLVRTLVELMGDTFPEL 370

Query: 417 KQREAHIREIIAAEEASFGKTLLKGIEKFKK---AAQDVQGKVLSGQDAFILWDTYGFPL 473
           +++E ++  II  EE SF KT+ KGI +F K   A  DV  KV  G+DA  L+ + GFP+
Sbjct: 371 REKEEYVTAIIREEEESFSKTVDKGIVEFNKRCDALGDV--KVFPGEDAHFLYTSMGFPV 428

Query: 474 DLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQ----NKQAGGAIVMDADATAALHKRG 529
           DLT+LM EERGL +D+EG++  M E +E S +A     +  +G  + + A+ T+ L  +G
Sbjct: 429 DLTELMCEERGLTLDMEGYDAKMKEEQELSNAAHLAKMSAGSGKDMRLVAEQTSHLVNKG 488

Query: 530 VLATDDSFKFIWFQD-HKSVIKAIYTGSE-------FIESVVPGN-EVGIVLASSSFYAE 580
           V AT+D  K++W +D   S+IKA++ G         F++S+   N  VGIVL  ++FY E
Sbjct: 489 VDATNDDAKYVWNEDLEGSIIKALFIGRNETEDGIGFVDSISKENGAVGIVLDKTNFYGE 548

Query: 581 QGGQIFDEGFIEGLFG-SFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRK 639
            GGQ FD G I+   G +  + NVQIYG FV+HIG +TEG    +V +   C VDY RR 
Sbjct: 549 SGGQTFDTGSIKTSSGATIEITNVQIYGSFVLHIGDVTEGT--VTVNDAATCCVDYVRRA 606

Query: 640 LIAPNHTCTHMLNFALREVL---------GDHVDQKGSVVLPEKLRFDFSHGKPVDPEHL 690
            IA NHT TH+LNFALR+VL         G  VDQKGS+V   KLRFDFS   P+ PE L
Sbjct: 607 PIAANHTMTHILNFALRDVLVTRGDADQHGASVDQKGSLVDENKLRFDFSWSGPLTPEQL 666

Query: 691 RRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIG-RKVEDLLA 749
             +E I  +QI + + V +  A L  A+ I+ LRAVFGEVYPDPVRVVA+    +  +L 
Sbjct: 667 VAVEKICVDQINSAVPVDNYVAPLEGAQQISSLRAVFGEVYPDPVRVVAVSPSPITSMLE 726

Query: 750 DPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAAC 809
           +P++ +W   S E CGGTHL NT EA+ F LLSEEGIAKG+RRIT VT   A  A  AA 
Sbjct: 727 NPQDAQWNKYSVEFCGGTHLKNTSEAQGFVLLSEEGIAKGVRRITGVTMKDAAIATAAAS 786

Query: 810 SLEKEVDDASKIEGSLLE-------------------KNQVRKAQ----KKVA----EEN 842
             E ++  A  +EG  LE                   K Q R       KKVA       
Sbjct: 787 EFEAKLTAAGSLEGLDLEAHVKVLTVEMEGLSISAAKKIQFRDVMGTYGKKVAAWKKANA 846

Query: 843 LQKAVKVATETAEAAASNGKPFCISRVEVGLD---AAAVREAVLKVIEQKGMPVMVFSTD 899
            ++   V  +  EAA S      + R + G+D   A AV  A  K I+ K +  +  + D
Sbjct: 847 AEQTATVVEQVIEAANSTEGNKVVVRCDFGVDGKVAKAVSTAYGKKIKDKAL--LFVTAD 904

Query: 900 ETTNKAVVCAGVPEKSDQSKQLEVSEWLTAAL 931
              ++ +V A  P+ SD    ++   W+ AA+
Sbjct: 905 VDADRFMVVAFAPKGSD----VDCKAWVAAAV 932


>gi|393217115|gb|EJD02604.1| hypothetical protein FOMMEDRAFT_167809 [Fomitiporia mediterranea
           MF3/22]
          Length = 956

 Score =  879 bits (2272), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 471/956 (49%), Positives = 602/956 (62%), Gaps = 49/956 (5%)

Query: 52  DPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTAD 111
           +P   +W + KVR TFF +F+++ H   +SS  +P  DPTLLFANAGMNQ+K IFLGT D
Sbjct: 4   NPYKGDWSSRKVRQTFFDYFKERGHTYVQSSSTIPYEDPTLLFANAGMNQFKAIFLGTVD 63

Query: 112 PNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWA 171
           PN++++K  R  N+QKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK +AI ++
Sbjct: 64  PNSEMAKWKRVFNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKDAITFS 123

Query: 172 WELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIW-LKFLPASRVLPFGCKDNFWEM 230
           W+LLT+VY LP DRLY TYF GD K GL PD+EAR+ W  + LP S +L    KDNFWEM
Sbjct: 124 WQLLTEVYGLPKDRLYVTYFEGDPKNGLEPDDEAREYWKAQGLPDSHILTGNAKDNFWEM 183

Query: 231 GDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHV 290
           G TGPCGPCSEIHYDR G R+AA LVN DDP  +EIWN VFIQFNRESDGSL+PLPAKHV
Sbjct: 184 GATGPCGPCSEIHYDRIGGRNAAHLVNQDDPNVLEIWNNVFIQFNRESDGSLRPLPAKHV 243

Query: 291 DTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVV 350
           DTG+GFERL S++Q++ SNYDTD+F P+F  I + TG RPY G+ G DD D VDMAYRVV
Sbjct: 244 DTGMGFERLVSVIQDRSSNYDTDIFEPLFKRIHELTGVRPYEGRFGKDDEDGVDMAYRVV 303

Query: 351 ADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVM 409
           ADH+RTLSFA+ADG  P N GR YVLRRILRR  RY  + L  Q G FF+ LV  VV+ +
Sbjct: 304 ADHVRTLSFALADGGVPNNVGRGYVLRRILRRGARYARKKLGVQIGSFFSSLVPTVVEQL 363

Query: 410 GDVFPELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILW 466
           GDVFPEL +R   I+EI+  EE SF +TL +G    E++   A     K L+G+D + L+
Sbjct: 364 GDVFPELHKRTDEIKEILDEEEESFARTLDRGEKLFEQYASKALQSPSKTLNGEDVWRLY 423

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DT+GFP+DLT LMAEE GL +D EGF+ A  +++E S+    K     + +D    A+L 
Sbjct: 424 DTFGFPVDLTLLMAEELGLGIDQEGFDKAQAKSKEASKGGVKKGDKDLVKLDVHDIASLD 483

Query: 527 KRG-VLATDDSFKFIWFQDHKSVIKAIYTGSEFIE---SVVPGNEVGIVLASSSFYAEQG 582
           K   V  T+D  KF    +  + +KAIY    F+    ++      GI+L  ++FYAE G
Sbjct: 484 KNDTVPKTNDDAKFN-LGNITATVKAIYHDKSFVNHTGAISEDTTFGIILDKTNFYAEAG 542

Query: 583 GQIFDEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           GQ +D G   I+G+   F V NVQ Y G+V+H G L    GR SVG+EVI   D  RR  
Sbjct: 543 GQEYDTGSITIDGV-AEFEVTNVQSYSGYVLHTGILK--YGRLSVGDEVIATYDELRRWP 599

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           +  NHT TH+LNF+LREVLGDH+DQKGS+V P KLRFDFSH   + P  L++IE +  + 
Sbjct: 600 LRNNHTATHILNFSLREVLGDHIDQKGSLVAPTKLRFDFSHKSQISPTELQKIEDMSIDW 659

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           IK ++ VFSKE  L     I GLRAVFGE YPDPVRVV +   VE++  D EN +W   S
Sbjct: 660 IKRDVKVFSKELDLKSGYKIPGLRAVFGEAYPDPVRVVTLEYDVEEIAKDLENSKWRKTS 719

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK 820
            E CGGTH++ T + + F ++ E GIAKGIRR+TAVT   A      A +    +D   K
Sbjct: 720 IEFCGGTHVAKTGDIKGFVIVEESGIAKGIRRVTAVTGHEAADVTRQAKTFTATLDKIEK 779

Query: 821 IEG-------------------SLLEKNQ-------VRKA---QKKVAEENLQKA-VKVA 850
             G                   S+L+KN+       +RKA   Q K  E+ LQKA ++  
Sbjct: 780 ASGKEKDVMLKTFQVELGQADISVLKKNELRDRLAAIRKAFDKQTKEREQALQKAEIEKL 839

Query: 851 TETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAG 910
           TE  +A  +    F I  VE     A +  +V+    +      +FS D   NK      
Sbjct: 840 TEFFKANPNANAYFAILDVE---GNAKIIGSVITQARKLSKAAYLFSIDTENNKVTHANH 896

Query: 911 VPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEF 966
           VPE   + +      W    ++ + G+ G GK     G G +  +V  A+D+A + 
Sbjct: 897 VPEAFRRGEDFNAKTWSAGVVEVIGGKAG-GKDEGCQGVGVNTNKVQEALDVAKQL 951


>gi|156839933|ref|XP_001643652.1| hypothetical protein Kpol_1040p7 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156114272|gb|EDO15794.1| hypothetical protein Kpol_1040p7 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 956

 Score =  879 bits (2272), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 436/864 (50%), Positives = 582/864 (67%), Gaps = 39/864 (4%)

Query: 58  WPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLS 117
           W A  VR+TF  +F+ K H   +SSPVVP +DPTLLFANAGMNQYKPIFLGT DP+++  
Sbjct: 9   WTAAVVRNTFLDYFKSKEHKFVRSSPVVPFDDPTLLFANAGMNQYKPIFLGTVDPSSEFY 68

Query: 118 KLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTK 177
            L RA N+QKCIRAGGKHNDL+DVG+D+YHHTFFEMLGNWSFGDYFK EA+E++WELLT+
Sbjct: 69  TLKRAYNSQKCIRAGGKHNDLEDVGRDSYHHTFFEMLGNWSFGDYFKKEAVEYSWELLTQ 128

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPC 236
           VY +PADRLY TYF GDEK GL PD+EAR++W    +P   +LP   KDNFWEMG+ GPC
Sbjct: 129 VYSIPADRLYVTYFEGDEKQGLEPDHEARELWRSVGVPDDHILPGNAKDNFWEMGEQGPC 188

Query: 237 GPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGF 296
           GPCSEIHYDR G R+AA LVN DDP  +E+WN+VF+Q+NRE D SLK LPAKH+DTG+GF
Sbjct: 189 GPCSEIHYDRIGGRNAAHLVNQDDPDVLEVWNLVFMQYNREQDRSLKSLPAKHIDTGMGF 248

Query: 297 ERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRT 356
           ERL S+LQ+  SNYDTDVF P+F AIQ+    RPY+GK GA+D D +D AYRV+ADH+RT
Sbjct: 249 ERLVSVLQDVRSNYDTDVFQPLFKAIQEIANVRPYTGKFGAEDVDGIDTAYRVLADHVRT 308

Query: 357 LSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFPE 415
           L+FA+ADG  P NEGR YVLRRILRR  RY  + +    G FF+ L+  +++ + D+FPE
Sbjct: 309 LTFALADGGVPNNEGRGYVLRRILRRGARYARKYMNYPIGNFFSRLMPTLIEQVKDIFPE 368

Query: 416 LKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTYGFP 472
           + +  + + EI+  EEASF KTL +G    EK+  AA   + K L G+  + L+DTYGFP
Sbjct: 369 VAKDPSFVAEILDEEEASFSKTLDRGEKLFEKYAAAASQTESKTLDGKQVWRLYDTYGFP 428

Query: 473 LDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLA 532
           +DLT+LMAEE+GL +D  GF  A  E+ E S+    K     + ++    + L++  +  
Sbjct: 429 VDLTELMAEEQGLKIDGPGFEKAKQESYEASKRGGKKDNSDLLKLNVHELSQLNEEKIAK 488

Query: 533 TDDSFKFIWFQDHKSVIKAIYTGSEFIESVV-PGNEVGIVLASSSFYAEQGGQIFDEG-F 590
           +DDS K+  F +    I  +Y G +F++ +  PG + GI+L ++ FYAEQGGQ +D G  
Sbjct: 489 SDDSSKY-GFDNVDGTILKLYDGEQFVDEITEPGKKYGIILDNTCFYAEQGGQEYDTGKI 547

Query: 591 IEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHM 650
           I      F V NVQ+Y G+V H GSL E  G+ SVG+++I   D  RR  I  NHT TH+
Sbjct: 548 IIDDVAEFNVENVQLYNGYVFHTGSLVE--GKLSVGDKIIAAYDELRRHPIKNNHTGTHI 605

Query: 651 LNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSK 710
           LN+AL+E LG+ VDQKGS+V PEKLRFDFSH K +  + LR +E + N+QIK  + V+ K
Sbjct: 606 LNYALKETLGNDVDQKGSLVAPEKLRFDFSHKKALSLDELRNVEEVCNQQIKDNMAVYYK 665

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
           E  L  AK I+ +RAVFGE YPDPVRVV++G+ ++++LA+P N+EW   S E CGGTH+S
Sbjct: 666 EVPLDLAKTISSVRAVFGETYPDPVRVVSVGKPIDEILANPSNEEWNKYSIEFCGGTHVS 725

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK---------- 820
            T + + F +L E GIAKGIRRI AV+   A++A   A   E E++   K          
Sbjct: 726 KTGDIKYFIILEESGIAKGIRRIVAVSGTDAFEAQRIANEYESELESTEKLPFSPLKEKK 785

Query: 821 ----------IEGSLLEKNQVR----KAQKKVAEENLQKA----VKVATETAEAAASNGK 862
                     +  S+++KN+++    K +K V +E   +A     +V  E  E    N +
Sbjct: 786 LKELGVQLGQLSISVIKKNELKEKFTKIEKSVKDEVKSRAKLETKQVLDEVKEHFTENTE 845

Query: 863 P-FCISRVEVGLDAAAVREAVLKV 885
             F +  +++  +A A+ EA+  +
Sbjct: 846 SLFLVKHIDIPPNAKAITEAIAHI 869


>gi|401623423|gb|EJS41521.1| ala1p [Saccharomyces arboricola H-6]
          Length = 958

 Score =  879 bits (2270), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 445/862 (51%), Positives = 576/862 (66%), Gaps = 39/862 (4%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           +W A  VR+TF  +F+ K H   KSSPVVP +DPTLLFANAGMNQYKPIFLGT DP +  
Sbjct: 8   KWTAANVRNTFLDYFKCKEHKFVKSSPVVPFDDPTLLFANAGMNQYKPIFLGTVDPASDF 67

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
             L RA N+QKCIRAGGKHNDL+DVGKD+YHHTFFEMLGNWSFGDYFK EAI ++W LLT
Sbjct: 68  YTLKRAYNSQKCIRAGGKHNDLEDVGKDSYHHTFFEMLGNWSFGDYFKKEAITYSWTLLT 127

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
           +VY +P +RLY TYF GDEK GL PD EAR++W+   +P   +LP   KDNFWEMGD GP
Sbjct: 128 EVYGIPKNRLYVTYFEGDEKLGLEPDTEARELWINVGVPEDHILPGNAKDNFWEMGDQGP 187

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPCSEIHYDR G R+A+SLVN DDP  +E+WN+VFIQFNRE DGSLK LPAKH+DTG+G
Sbjct: 188 CGPCSEIHYDRIGGRNASSLVNMDDPDVLEVWNLVFIQFNREQDGSLKSLPAKHIDTGMG 247

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
           FERL S+LQ+  SNYDTDVF P+F+ IQ+ T ARPYSG  G DD D +D AYRV+ADH+R
Sbjct: 248 FERLVSVLQDVRSNYDTDVFTPLFERIQEITSARPYSGNFGEDDKDGIDTAYRVLADHVR 307

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFP 414
           TL+FA+ADG  P NEGR YVLRRILRR  RY  + +    G FF+ L   ++  + D+FP
Sbjct: 308 TLTFALADGGVPNNEGRGYVLRRILRRGARYARKYMNYPIGNFFSTLSPTLIAQVQDIFP 367

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTYGF 471
           EL +  A + EI+  EEASF KTL +G    EK+  AA   + K L G+  + L+DTYGF
Sbjct: 368 ELAKDPAFLFEILDEEEASFAKTLDRGERLFEKYAAAASKTESKTLDGKQVWRLYDTYGF 427

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           P+DLT+LMAEE+GL +D  GF  A  E+ E S+    K     I ++    + L+   V 
Sbjct: 428 PVDLTELMAEEQGLKIDGPGFEKAKQESYEASKRGGKKDQSDLIKLNVHELSDLNDAKVP 487

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVP-GNEVGIVLASSSFYAEQGGQIFDEG- 589
            T+D FK+    + +S I  ++ G+ F+E +   G + G++L  + FYAEQGGQ +D G 
Sbjct: 488 KTNDEFKY-GSANVESTILKLHDGTNFVEEITEQGKKYGVILDKTCFYAEQGGQEYDTGK 546

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
            +      F V NVQ+Y GFV H GSL E  G+ SVG+++I   D  RR  I  NHT TH
Sbjct: 547 IVIDDVAEFNVENVQLYNGFVFHTGSLEE--GKLSVGDKIIASFDELRRFPIKNNHTGTH 604

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +LN AL+E LG+ +DQKGS+V PEKLRFDFSH K V  + L++IE I N+QIK  L VF 
Sbjct: 605 ILNLALKETLGNDIDQKGSLVAPEKLRFDFSHKKAVTGDELKKIEDICNKQIKDNLQVFY 664

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
           KE  L  AK I+G+RAVFGE YPDPVRVV++G+ +++LLA+P N+EW + S E CGGTH+
Sbjct: 665 KEIPLDLAKSIDGVRAVFGETYPDPVRVVSVGKPIDELLANPANEEWNNYSIEFCGGTHV 724

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK--------- 820
           + T + + F +L E GIAKGIRRI AVT   A++A   A     ++D A K         
Sbjct: 725 NKTGDIKFFVVLEESGIAKGIRRIVAVTGTEAFEAQRLADQFATDLDAADKLPFSPIKEK 784

Query: 821 -----------IEGSLLEKNQVR----KAQKKVAEENLQKAVKVATETAEAA-----ASN 860
                      +  S++ KN+++    K +K V +E   +A K   +T +        + 
Sbjct: 785 KLKELGVKLGQLSISVITKNELKQKFNKIEKAVKDEVKSRAKKENKQTLDEVKTFFETNE 844

Query: 861 GKPFCISRVEVGLDAAAVREAV 882
             P+ +  +++  +A A+ EA+
Sbjct: 845 DAPYLVKFIDISPNAKAITEAI 866


>gi|401841914|gb|EJT44225.1| ALA1-like protein [Saccharomyces kudriavzevii IFO 1802]
          Length = 958

 Score =  879 bits (2270), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 458/944 (48%), Positives = 606/944 (64%), Gaps = 44/944 (4%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           +W A  VR+TF  +F+ K H   KSSPVVP +DPTLLFANAGMNQYKPIFLGT DP +  
Sbjct: 8   KWTAANVRNTFLDYFKSKEHKFVKSSPVVPFDDPTLLFANAGMNQYKPIFLGTVDPASDF 67

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
             L RA N+QKCIRAGGKHNDL+DVGKD+YHHTFFEMLGNWSFGDYFK EA+ ++W LLT
Sbjct: 68  YTLKRAYNSQKCIRAGGKHNDLEDVGKDSYHHTFFEMLGNWSFGDYFKIEAVTYSWTLLT 127

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
           +VY +P DRLY TYF GDEK GL PD EAR++W    +P   +LP   KDNFWEMGD GP
Sbjct: 128 EVYGIPKDRLYVTYFEGDEKLGLEPDIEARELWRNAGVPDDHILPGNAKDNFWEMGDQGP 187

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPCSEIHYDR G R+AASLVN DDP  +E+WN+VFIQFNRE DGSLK LPAKH+DTG+G
Sbjct: 188 CGPCSEIHYDRIGGRNAASLVNMDDPDVLEVWNLVFIQFNREQDGSLKSLPAKHIDTGMG 247

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
           FERL S+LQ+  SNYDTDVF P+F+ IQ+ T  +PYSGK G DD+D VD AYRV+ADH+R
Sbjct: 248 FERLVSVLQDVRSNYDTDVFTPLFERIQEITSVKPYSGKFGEDDSDGVDTAYRVLADHVR 307

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFP 414
           TL+FA+ADG  P NEGR YVLRRILRR  RY  + +    G FF+ L   +++ + D+FP
Sbjct: 308 TLTFALADGGVPNNEGRGYVLRRILRRGARYARKYMNYPIGNFFSTLAPTLIEQVQDIFP 367

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTYGF 471
           EL +  A + EI+  EEASF KTL +G    EK+  AA   + + L G+  + L+DTYGF
Sbjct: 368 ELAKDPAFLFEILDEEEASFAKTLDRGERLFEKYASAASKTESRTLDGKQVWRLYDTYGF 427

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           P+DLT+LMAEE+GL +D  GF  A  E+ E S+    K     I ++    + L+   V 
Sbjct: 428 PVDLTELMAEEQGLKIDGPGFEKAKQESYEASKRGGKKDQSDLIKLNVHELSELNDANVP 487

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVV-PGNEVGIVLASSSFYAEQGGQIFDEG- 589
            T+D FK+       +++K ++ G++F+  +  PG + GI+L  + FYAEQGGQ +D G 
Sbjct: 488 KTNDEFKYGSANVESTILK-LHDGTKFVNEITEPGRKYGIILDKTCFYAEQGGQEYDTGK 546

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
            +      F V NVQ+Y GFV H GSL E  G+ SVG+++I   D  RR  I  NHT TH
Sbjct: 547 IVIDDAAEFNVENVQLYNGFVFHTGSLEE--GKLSVGDKIIASFDELRRFPIKNNHTGTH 604

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +LNFAL+E LG+ +DQKGS+V  EKLRFDFS+ K V  + L+ IE   N+QIK  L VF 
Sbjct: 605 ILNFALKETLGNDIDQKGSLVASEKLRFDFSYKKAVTGDELKNIEDTCNQQIKENLQVFY 664

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
           KE  L  AK I+G+RAVFGE YPDPVRVV++G+ +E+LLA+P N+EW   S E CGGTH+
Sbjct: 665 KEIPLELAKSIDGVRAVFGETYPDPVRVVSVGKPIEELLANPANEEWTKYSIEFCGGTHV 724

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK--------- 820
           + T + + F +L E GIAKGIRRI AVT   A++A   A     ++D A K         
Sbjct: 725 NKTGDIKYFVILEESGIAKGIRRIVAVTGTEAFEAQRLAERFAADLDAADKLPFSPVKEK 784

Query: 821 -----------IEGSLLEKNQVR----KAQKKVAEENLQKAVKVATETAEAA-----ASN 860
                      +  S++ KN+++    K +K V +E   +A K   +T +        + 
Sbjct: 785 KLKELGVKLGQLSISVITKNELKQKFNKIEKAVKDEVKSRAKKENKQTLDEVKTFFETNE 844

Query: 861 GKPFCISRVEVGLDAAAVREAVLKVIEQ---KGMPVMVFSTDETTNKAVVCAGVPEKSDQ 917
             P+ +  +++  +A A+ EA+  +      K   + + + ++   +      +   +  
Sbjct: 845 NTPYFVKFIDISPNAKAITEAINYMKSNDSVKDKSIYLLAGNDPEGRVAHGCYISNVA-L 903

Query: 918 SKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMD 961
           +K ++ SE        + G+ G GKG +  G G   A +  A+D
Sbjct: 904 AKGVDGSELAKKVSSVIGGKAG-GKGNVFQGMGDKPAAIQNAVD 946


>gi|403298315|ref|XP_003939968.1| PREDICTED: alanine--tRNA ligase, cytoplasmic [Saimiri boliviensis
           boliviensis]
          Length = 968

 Score =  878 bits (2269), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 467/966 (48%), Positives = 619/966 (64%), Gaps = 63/966 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A+++R  F +FF+   H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  ++KL
Sbjct: 7   ASEIRQRFIEFFKRNEHTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A + A ELLT+ +
Sbjct: 67  SRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +P +RLY TYFGGDE AGL PD E + IW    L  +++LP   KDNFWEMGDTGPCGP
Sbjct: 127 GIPIERLYVTYFGGDEAAGLEPDLECKQIWQNLGLEDTKILPGNMKDNFWEMGDTGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G RDAA LVN DDP  +EIWN+VFIQ+NRE+DG LKPLP K +DTG+G ER
Sbjct: 187 CSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNRETDGILKPLPKKSIDTGMGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+F+P F+AIQ+ TGARPY+GKVGA+DAD +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY  E L A  GFF  LV++VV+ +GD FPELK+
Sbjct: 307 VALADGGRPDNTGRGYVLRRILRRAVRYAHEKLNASRGFFATLVDVVVRSLGDAFPELKK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
               +++II  EE  F KTL +G     +    +   K + G  A++L+DTYGFP+DLT 
Sbjct: 367 DPDMVKDIINEEEVQFLKTLSRGRRILDRKILSLGDSKTIPGDTAWLLYDTYGFPVDLTG 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
           L+AEE+GLLVD++GF      A+ +S   Q K AGG   I++D  A   L  +G+  TDD
Sbjct: 427 LIAEEKGLLVDMDGFEEERKLAQLKS---QGKGAGGEDFIMLDIYAIEELRAQGLEVTDD 483

Query: 536 SFKFIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           S K+ +         F++  + + A+     F+E V  G E G+VL  + FYAEQGGQI+
Sbjct: 484 SPKYNYHSDSSGNYVFENTVATVLALRREKMFVEEVSTGQECGVVLDKTCFYAEQGGQIY 543

Query: 587 DEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           DEG++  +  S      F V+N Q+ GG+V+HIG++    G   VG++V   +D  RR+ 
Sbjct: 544 DEGYLVKVDDSSEDKTEFTVKNAQVRGGYVLHIGTIY---GDLKVGDQVQLFIDEPRRRP 600

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           +  NHT TH+LNFALR VLG+  DQKGS+V P++LRFDF+    +  + ++R E I NE 
Sbjct: 601 VMSNHTATHILNFALRSVLGE-ADQKGSLVAPDRLRFDFTAKGAMSTQQIKRAEEIANEM 659

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I+A   V++++  LA AK I GLRAVF E YPDPVRVV+IG  V +LL DP        S
Sbjct: 660 IEAAKPVYTQDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTS 719

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSL--------- 811
            E CGGTHL N+  A AF +++EE IAKGIRRI AVT   A KA   A SL         
Sbjct: 720 VEFCGGTHLQNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKAESLRTSLSVMEA 779

Query: 812 ------------EKEVDDASKIEGSLL----EKNQVRKAQKKVAE--ENLQKAVK----- 848
                       ++E+ D  ++  + +    +K+++R+  K + +  ++L +A K     
Sbjct: 780 KVRAQTAPNKDVQREIADLGEVMATAVIPQWQKDELRETLKSLKKVMDDLDRASKADVQK 839

Query: 849 -VATETAEAAASN-GKPFCISRVEVGLDAAAVREAV-LKVIEQKGMPVMVFSTDETTNKA 905
            V  +T +   SN  +P  I  +E G  A A+ EA+ L  +       M+F+ D    K 
Sbjct: 840 RVLEKTKQLIDSNPNQPLVILEMESGASAKALNEALKLFKMHSPQTSAMLFTVDNEAGKI 899

Query: 906 VVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAE 965
                VP+ +  ++ L+ SEW+      + G+ G GK   A   G +   +  A+ LA  
Sbjct: 900 TCLCQVPQNA-ANRGLKASEWVQQVSGLMDGK-GGGKDVSAQATGKNVGCLQEALQLATS 957

Query: 966 FAAMKL 971
           FA ++L
Sbjct: 958 FAQLRL 963


>gi|417413283|gb|JAA52978.1| Putative alanyl-trna synthetase, partial [Desmodus rotundus]
          Length = 973

 Score =  878 bits (2268), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 469/967 (48%), Positives = 617/967 (63%), Gaps = 65/967 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A+++R  F  FF+   H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  ++KL
Sbjct: 12  ASEIRQRFIDFFKKNEHTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKL 71

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A + A ELLT+ +
Sbjct: 72  RRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQEF 131

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +P +RLY TYFGGDE AGL  D E R IW    L  S++LP   KDNFWEMGDTGPCGP
Sbjct: 132 GIPVERLYVTYFGGDEAAGLEADLECRQIWQNLGLDDSKILPGNMKDNFWEMGDTGPCGP 191

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSE+HYDR G RDAA LVN DDP  +EIWN+VFIQ+NRE+DG LKPLP K +DTG+G ER
Sbjct: 192 CSEVHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNREADGVLKPLPKKSIDTGMGLER 251

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+F+P F+AIQ+ TGARPY+GKVGADDAD +DMAYRV+ADH RT++
Sbjct: 252 LVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGADDADGIDMAYRVLADHARTIT 311

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY  E L A  GFF  LV++VV+ +GD FPELK+
Sbjct: 312 VALADGGRPDNTGRGYVLRRILRRAVRYSHEKLSASKGFFATLVDVVVQSLGDAFPELKK 371

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
               +++II  EE  F KTL +G     +  Q +   K + G  A++L+DTYGFP+DLT 
Sbjct: 372 DPDMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTG 431

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
           L+AEE+GL VD++GF    +E R     +Q K AGG   +++D  A   L ++ + ATDD
Sbjct: 432 LIAEEKGLAVDMDGFE---EERRLAQLKSQGKGAGGEDHLMLDIYAIEELREKSLEATDD 488

Query: 536 SFKFIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           S K+ +         F+   + + A+     F+E V  G E G+VL  + FYAEQGGQI+
Sbjct: 489 SPKYSYLSDAGGSYTFESTVATVMALRREKRFVEEVSTGQECGVVLDKTCFYAEQGGQIY 548

Query: 587 DEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           DEG++  +  S      F V+N Q+ GG+V+H+G++    G   VG++V   +D  RR+ 
Sbjct: 549 DEGYLVKIDDSMEDKTEFTVKNTQVRGGYVLHVGTIY---GHLKVGDQVRLFIDEPRRRP 605

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           +  NHT TH+LNFALR VLG+  DQ+GS+V P++LRFDF+    +  + +++ E IVNE 
Sbjct: 606 VMSNHTATHILNFALRSVLGE-ADQRGSLVAPDRLRFDFTAKGAMSTQQIKKAEQIVNEM 664

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I+A   V++++  LA AK I GLRAVF E YPDPVRVV+IG  V +LL DP        S
Sbjct: 665 IEAAKPVYAQDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTS 724

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEK------- 813
            E CGGTHL N+  A AF ++SEE IAKGIRRI AVT   A KA   A SL+K       
Sbjct: 725 VEFCGGTHLQNSSHAGAFVIVSEEAIAKGIRRIVAVTGAEAQKALRKAESLKKSLCVMEA 784

Query: 814 --------------EVDDASKIEGSLL----EKNQVRKAQKKVAE--ENLQKAVK----- 848
                         EV D  +   + +    +K++ R++ K + +  ++L +A K     
Sbjct: 785 KVKAQTAPNKDVQREVADLGEALATAVIPQWQKDEFRESLKSLKKIMDDLDRASKADVQK 844

Query: 849 -VATETAEAAASN-GKPFCISRVEVGLDAAAVREAVLKVIEQKG--MPVMVFSTDETTNK 904
            V  +T +   SN  +P  I  +E G  A A+ EA LK+ +        M+F+ D    K
Sbjct: 845 RVLEKTKQLIDSNPNQPLVILEMESGASAKALNEA-LKLFKTHSPQTAAMLFTVDNEAGK 903

Query: 905 AVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAA 964
                 VP+ +  ++ L+ SEW+      + G+ G GK   A   G +   +  A+ LA 
Sbjct: 904 ITCLCQVPQNA-ANRGLKASEWVQQVSGLMDGK-GGGKDVSAQATGKNVGCLQEALRLAT 961

Query: 965 EFAAMKL 971
            FA ++L
Sbjct: 962 SFAQLRL 968


>gi|209862801|ref|NP_001093987.1| alanine--tRNA ligase, cytoplasmic [Rattus norvegicus]
 gi|261260086|sp|P50475.3|SYAC_RAT RecName: Full=Alanine--tRNA ligase, cytoplasmic; AltName:
           Full=Alanyl-tRNA synthetase; Short=AlaRS
 gi|149038198|gb|EDL92558.1| alanyl-tRNA synthetase [Rattus norvegicus]
          Length = 968

 Score =  878 bits (2268), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 471/968 (48%), Positives = 616/968 (63%), Gaps = 67/968 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R+ F  +F+   H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  ++KL
Sbjct: 7   AREIRERFINYFKRNEHTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTVDPSHPMAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A + A ELLT+ +
Sbjct: 67  SRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +P +RLY TYFGGDE AGL PD E R IW    L  +++LP   KDNFWEMGDTGPCGP
Sbjct: 127 GIPVERLYVTYFGGDEAAGLEPDLECRQIWQNLGLDEAKILPGNMKDNFWEMGDTGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G RDAA LVN DDP  +EIWN+VFIQ+NRESDG LKPLP K +DTG+G ER
Sbjct: 187 CSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNRESDGVLKPLPKKSIDTGMGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+F+P F+AIQ+ TGARPY+GKVGA+D D +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDTDGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY  E L A  GFF  LV++VV+ +GD FPELK+
Sbjct: 307 VALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRGFFATLVDVVVQSLGDAFPELKK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
               +++II  EE  F KTL +G     +  Q +   + + G  A++L+DTYGFP+DLT 
Sbjct: 367 DPDMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDCQTIPGDTAWLLYDTYGFPVDLTG 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
           L+AEE+GL+VD++GF      A+ +S   Q K AGG   I++D  A   L  +G+ ATDD
Sbjct: 427 LIAEEKGLVVDMDGFEEERKLAQLKS---QGKGAGGEDLIMLDIYAIEELRAKGLEATDD 483

Query: 536 SFKFIWFQDHK---------SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           S K+ +  D           + + A+     F++ VV G E G+VL  + FYAEQGGQIF
Sbjct: 484 SPKYNYHSDSSGSYVFECTVATVLALRREKMFVDEVVTGQECGVVLDKTCFYAEQGGQIF 543

Query: 587 DEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           DEG++  +  S      F V+N Q+ GG+V+HIG++    G   VG++V   +D  RR+ 
Sbjct: 544 DEGYLVKVDDSSEDKTEFTVKNAQVRGGYVLHIGTIY---GNLRVGDQVRLFIDEPRRRP 600

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           +  NHT TH+LNFALR VLGD  DQKGS+V P++LRFDF+    +  E +++ E IVN  
Sbjct: 601 VMSNHTATHILNFALRSVLGD-ADQKGSLVAPDRLRFDFTAKGAMSTEQIKKTEEIVNGM 659

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I+A   V++ +  LA AK I GLRAVF E YPDPVRVV+IG  V +LL DP        S
Sbjct: 660 IEAAKPVYTLDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTS 719

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSL--------- 811
            E CGGTHL N+  A AF +++EE IAKGIRRI AVT   A KA   + +L         
Sbjct: 720 VEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKSETLKKSLSAMEV 779

Query: 812 ------------EKEVDDASKIEGSLL-------EKNQVRKAQKKVAEENLQKAVK---- 848
                       +KE+ D  ++  + +       E+ +  K+ KKV  ++L +A K    
Sbjct: 780 KVKAQSAPNKDVQKEIADLGEVLATAVIPQWQKDEQRETLKSLKKVM-DDLDRASKADVQ 838

Query: 849 --VATETAEAAASN-GKPFCISRVEVGLDAAAVREAVLKVIEQKG--MPVMVFSTDETTN 903
             V  +T +   SN  +P  I  +E G  A A+ EA LK+ +        M+F+ D    
Sbjct: 839 KRVLEKTKQLIDSNPNQPLVILEMESGASAKALNEA-LKLFKTHSPQTSAMLFTVDNEAG 897

Query: 904 KAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLA 963
           K      VP+ +  ++ L+ SEW+      + G+ G GK   A   G +   +  A+ LA
Sbjct: 898 KITCLCQVPQNA-ANRGLKASEWVQQVSGLMDGK-GGGKDMSAQATGKNVGCLQEALQLA 955

Query: 964 AEFAAMKL 971
             FA ++L
Sbjct: 956 TSFAQLRL 963


>gi|354503320|ref|XP_003513729.1| PREDICTED: alanyl-tRNA synthetase, cytoplasmic-like [Cricetulus
           griseus]
 gi|344253408|gb|EGW09512.1| Alanyl-tRNA synthetase, cytoplasmic [Cricetulus griseus]
          Length = 968

 Score =  877 bits (2266), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 472/968 (48%), Positives = 616/968 (63%), Gaps = 67/968 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R+ F  FF+   H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  ++KL
Sbjct: 7   AREIRERFINFFKKNEHTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A + A ELLT+ +
Sbjct: 67  SRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +P +RLY TYFGGDE AGL PD E + IW    L  +R+LP   KDNFWEMGDTGPCGP
Sbjct: 127 GIPVERLYVTYFGGDEAAGLEPDLECKQIWQNLGLDDARILPGNMKDNFWEMGDTGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G RDAA LVN DDP  +EIWN+VFIQ+NRE+DG LKPLP K +DTG+G ER
Sbjct: 187 CSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNRETDGLLKPLPKKSIDTGMGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+F+P F+AIQ+ TGARPY+GKVGA+DAD +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY  E L A  GFF  LV++VV+ +GD FPELK+
Sbjct: 307 VALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRGFFATLVDVVVQSLGDAFPELKK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
               +++II  EE  F KTL +G     +  Q +   K + G  A++L+DTYGFP+DLT 
Sbjct: 367 DPDMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDCKTIPGDTAWLLYDTYGFPVDLTG 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
           L+AEE+GL+VD++GF      A+ +S   Q K AGG   I++D  A   L  +G+ ATDD
Sbjct: 427 LIAEEKGLVVDMDGFEEERKLAQLKS---QGKGAGGEDLIMLDIYAIEELRAKGLEATDD 483

Query: 536 SFKFIWFQDHK---------SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           S K+ +  D           + + A+     F+E VV G E G+VL  + FYAEQGGQI+
Sbjct: 484 SPKYNYHSDSNGSYVFECTVATVLALRREKMFVEEVVTGQECGVVLDKTCFYAEQGGQIY 543

Query: 587 DEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           DEG++  +  S      F V+N Q+ GG+V+HIG++    G   VG++V   +D  RR+ 
Sbjct: 544 DEGYLVKVDDSSEDKTEFTVKNTQVRGGYVLHIGTIY---GNLKVGDQVRLFIDEPRRRP 600

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           +  NHT TH+LNFALR VLG+  DQKGS+V P++LRFDF+    +  + ++  E IVN  
Sbjct: 601 VMSNHTATHILNFALRSVLGE-ADQKGSLVAPDRLRFDFTAKGAMSTQQIKEAEEIVNAM 659

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I+A   V++++  LA AK I GLRAVF E YPDPVRVV+IG  V +LL DP        S
Sbjct: 660 IEAAKPVYTQDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTS 719

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSL--------- 811
            E CGGTHL N+  A AF +++EE IAKGIRRI AVT   A KA   A SL         
Sbjct: 720 VEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKAESLKRSLSVMET 779

Query: 812 ------------EKEVDDASKIEGSLL-------EKNQVRKAQKKVAEENLQKAVK---- 848
                       ++E+ D  +   + +       E+ +  K+ KKV  ++L +A K    
Sbjct: 780 KVKAQTAPNKDVQREIADLGEALATAVIPQWQKDEQRETLKSLKKVM-DDLDRASKADVQ 838

Query: 849 --VATETAEAAASN-GKPFCISRVEVGLDAAAVREAVLKVIEQKG--MPVMVFSTDETTN 903
             V  +T +   SN  +P  I  +E G  A A+ EA LK+ +        M+F+ D    
Sbjct: 839 KRVLEKTKQLIDSNPNQPLVILEMESGASAKALNEA-LKLFKTHSPQTSAMLFTVDNEAG 897

Query: 904 KAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLA 963
           K      VP+ +  ++ L+ SEW+      + G+ G GK   A   G +   +  A+ LA
Sbjct: 898 KITCLCQVPQNA-ANRGLKASEWVQQVSGLMDGK-GGGKDVSAQATGKNVGCLQEALQLA 955

Query: 964 AEFAAMKL 971
             FA ++L
Sbjct: 956 TSFAQLRL 963


>gi|340718527|ref|XP_003397717.1| PREDICTED: alanyl-tRNA synthetase, cytoplasmic-like [Bombus
           terrestris]
          Length = 1193

 Score =  877 bits (2265), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 468/978 (47%), Positives = 615/978 (62%), Gaps = 83/978 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R  +  FF+ KNH    SS  +P +DPTLLF NAGMNQ+KPIFLGT DPN+ ++KL
Sbjct: 7   AKQIRQAYIDFFKSKNHEYVHSSSTIPHDDPTLLFTNAGMNQFKPIFLGTVDPNSDMAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            RA N+QKCIRAGGKHNDLDDVGKD YHHTFFEM+GNWSFGDYFK E   WAWE LT   
Sbjct: 67  MRAVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMMGNWSFGDYFKKEICTWAWEFLTVKL 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
           +L ADRLY TYFGGDEK  L  D E + IWL   +  S VLP   KDNFWEMG+TGPCGP
Sbjct: 127 KLSADRLYVTYFGGDEKNNLKSDEECKQIWLSLGVSPSHVLPGNMKDNFWEMGETGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR GNR+AA LVN DDP  +EIWN+VFIQFNRE+DGSLK LP KH+D GLG ER
Sbjct: 187 CSEIHYDRIGNREAADLVNQDDPDVLEIWNLVFIQFNRETDGSLKLLPKKHIDCGLGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S++QNK +NYDTD+F+P+FDAIQ+ TGA PY G+VG +D D +DMAYRV+ADH RT++
Sbjct: 247 LVSVIQNKRANYDTDLFVPLFDAIQEGTGAPPYRGRVGMEDEDGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY +E L A+ GFF  LVN+VV ++GD+FPE+++
Sbjct: 307 IALADGGVPDNTGRGYVLRRILRRAVRYATEKLNAKPGFFGSLVNVVVNILGDIFPEVRK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ-GKVLSGQDAFILWDTYGFPLDLTQ 477
              +I ++I  EE  F KTL +G     +    ++   VL G  A+ L+DTYGFP+DLTQ
Sbjct: 367 EPQYIIDVINEEEIQFLKTLSRGRNLLNRTIAKLESSNVLPGDVAWRLYDTYGFPVDLTQ 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA---IVMDADATAALHKRGVLATD 534
           LMAEE+GL VDI G+    +EA+++++     ++GG    I +D  A   L  +G+  T+
Sbjct: 427 LMAEEKGLKVDIIGY----EEAKKQAQLISQSKSGGVDDQINLDVHAITELQNKGIKPTN 482

Query: 535 DSFKFIW-------FQDHKSV-----IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQG 582
           D  K+ +       +++++ V     + A+     F++ V  G EVGI+L  ++FYAEQG
Sbjct: 483 DLPKYNYSVVNNKLYEEYEFVPCTGTVIAVRRAKTFVDEVSSGEEVGILLDQTNFYAEQG 542

Query: 583 GQIFDEGF---IEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRK 639
           GQI+DEGF   I+       ++NVQ+ GG+V+HIG++  G G+   G++V   +D  RR+
Sbjct: 543 GQIYDEGFLVKIDDDDTEVRIKNVQVRGGYVLHIGTV--GQGKLKKGDKVFLNIDTTRRR 600

Query: 640 LIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNE 699
           LI  NHT TH LN ALR+VLG  VDQKGS+V P++LRFDF++   +  E +R++E I + 
Sbjct: 601 LIMSNHTATHALNHALRKVLGTEVDQKGSLVAPDRLRFDFTNKGAMTAEQVRKVEEITSN 660

Query: 700 QIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSI 759
            IK    +++KE+ LA AK I GLRA+F E YPDPVRVV+IG  VEDL  DP +   L  
Sbjct: 661 MIKGNKKIYAKESNLALAKTIQGLRAMFEETYPDPVRVVSIGVPVEDLEKDPLSSAALQT 720

Query: 760 SAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLE------- 812
           S E CGGTHL  T     F + SEE IAKGIRRI A+T   A KA + A  L+       
Sbjct: 721 SVEFCGGTHLHCTEHIGDFVIASEEAIAKGIRRIVALTGPEATKAQKKASILQNHLDQLQ 780

Query: 813 ----------------KEV----DDASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATE 852
                           KE+    DD S    S  +K+++RK  K     +L+KA+     
Sbjct: 781 ATIVADKGGINIKEHIKEIIELTDDVSHATISSWKKDKMRKMLK-----DLRKALDDKER 835

Query: 853 TAEAAASNG-----------KPFCISRVEV--------GLDAAAVREAVLKVIEQKGMPV 893
            A+ A  N               C+  VEV         LD+A  +   +K I  +   +
Sbjct: 836 VAKIAIVNAVVDTIQEIIQQNIGCLVLVEVLQAYSNTKALDSALKK---IKAISPETSAL 892

Query: 894 MVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDA 953
           ++ S D    K    + V  KS  +K L+ +EW+   +  ++G+ G GK   A   GT+ 
Sbjct: 893 LI-SVDPDAKKIFALSAV-SKSAINKGLKANEWIQEIVSLMEGK-GGGKSESAQASGTNI 949

Query: 954 AQVTPAMDLAAEFAAMKL 971
           + VT  +  A  FA  KL
Sbjct: 950 SCVTKLVHTAKNFANSKL 967


>gi|344290803|ref|XP_003417126.1| PREDICTED: alanyl-tRNA synthetase, cytoplasmic [Loxodonta africana]
          Length = 968

 Score =  876 bits (2264), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 470/968 (48%), Positives = 618/968 (63%), Gaps = 67/968 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A+++R  F  FF+   H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  ++KL
Sbjct: 7   ASEIRQRFIDFFKRNEHTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A + A ELLT+ +
Sbjct: 67  SRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +P +RLY TYFGGDE+AGL PD E + IW    L  +++LP   KDNFWEMGDTGPCGP
Sbjct: 127 GIPVERLYVTYFGGDEEAGLEPDLECKQIWQNLGLDDTKILPGNMKDNFWEMGDTGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G RDAA LVN DDP  +EIWN+VFIQ+NRE+DG LKPLP K +DTG+G ER
Sbjct: 187 CSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNRETDGILKPLPKKSIDTGMGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+F+P F+AIQ+ TGARPY+GKVGADDAD +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGADDADGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY  E L A  GFF  LV++VV+ +GD FPELK+
Sbjct: 307 VALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNANRGFFATLVDVVVQSLGDAFPELKK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
               +++II  EE  F KTL +G     +  Q +   K + G  A++L+DTYGFP+DLT 
Sbjct: 367 DPDMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTG 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
           L+AEE+GL VD++GF      A+ +S   Q K AGG   I++D  A   L  +G+ ATDD
Sbjct: 427 LIAEEKGLAVDMDGFEEERKLAQLKS---QGKGAGGEDLIMLDIYAIEELRSKGLEATDD 483

Query: 536 SFKFIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           S K+ +         F++  + + A+     F+E V  G E G+VL  + FYAEQGGQI+
Sbjct: 484 SPKYNYHSDSSGSYVFENAVATVMALRRDKTFVEEVSTGQECGVVLDKTCFYAEQGGQIY 543

Query: 587 DEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           DEG++  +  +      F V+N Q+ GG+V+HIG++    G   VG++V   +D  RR+ 
Sbjct: 544 DEGYLVKVDDNSEDKTEFTVKNAQVRGGYVLHIGTIY---GNLKVGDQVRLFIDEPRRRP 600

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           +  NHT TH+LNFALR VLG+  DQKGS+V P++LRFDF+    +  E ++  E I N+ 
Sbjct: 601 VMSNHTATHILNFALRSVLGE-ADQKGSLVAPDRLRFDFTAKGAMSTEQIKEAEEISNQM 659

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I+A   V++++  LA AK I GLRAVF E YPDPVRVV+IG  V +LL DP        S
Sbjct: 660 IEAAKPVYTQDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLEDPSGPAGSLTS 719

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEK------- 813
            E CGGTHL N+  A AF ++SEE IAKGIRRI AVT   A KA   A SL+K       
Sbjct: 720 VEFCGGTHLQNSSHAGAFVIVSEEAIAKGIRRIVAVTGAEAQKALRKAESLKKSLSVMEA 779

Query: 814 --------------EVDDASKIEGSLL----EKNQVR---KAQKKVAEE-------NLQK 845
                         E+ D  +   + +    +K+++R   K+ KK+ ++       ++QK
Sbjct: 780 KVKAQTAPNKDVQREIADLGEALATAVIPQWQKDELREHLKSLKKIMDDLDRASKADVQK 839

Query: 846 AVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKG--MPVMVFSTDETTN 903
            V   T+    +  N +P  I  +E G  A A+ EA LK+ +        M+F+ D    
Sbjct: 840 RVLEKTKQLIDSHPN-QPLVILEMESGASAKALNEA-LKLFKTHSPQTAAMLFTVDNEAG 897

Query: 904 KAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLA 963
           K      VP+ +  ++ L+ SEW+      + G+ G GK   A   G +   +  A+ LA
Sbjct: 898 KITCLCQVPQNA-ANRGLKASEWVQQVSGLMDGK-GGGKDVSAQATGKNVGCLQEALQLA 955

Query: 964 AEFAAMKL 971
             FA + L
Sbjct: 956 TSFAQLHL 963


>gi|81871231|sp|Q8CFX8.1|SYAC_MESAU RecName: Full=Alanine--tRNA ligase, cytoplasmic; AltName:
           Full=Alanyl-tRNA synthetase; Short=AlaRS
 gi|26522952|dbj|BAC44844.1| alanyl trna synthetase [Mesocricetus auratus]
          Length = 968

 Score =  876 bits (2264), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 472/968 (48%), Positives = 615/968 (63%), Gaps = 67/968 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R+ F  FF    H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  L+KL
Sbjct: 7   AREIRERFINFFRRNEHTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPLAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A + A ELLT+ +
Sbjct: 67  SRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +P +RLY TYFGGDE AGL PD E + IW    L  +++LP   KDNFWEMGDTGPCGP
Sbjct: 127 AIPVERLYVTYFGGDEAAGLEPDLECKQIWQNLGLDDAKILPGNMKDNFWEMGDTGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G RDAA LVN DDP  +EIWN+VFIQ+NRE+DG LKPLP K +DTG+G ER
Sbjct: 187 CSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNRETDGLLKPLPKKSIDTGMGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+F+P F+AIQ+ TGARPY+GKVGA+DAD +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY  E L A  GFF  LV++VV+ +GD FPELK+
Sbjct: 307 VALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRGFFATLVDVVVQSLGDAFPELKK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
               +++II  EE  F KTL +G     +  Q +   K + G  A++L+DTYGFP+DLT 
Sbjct: 367 DPDMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDCKTIPGDTAWLLYDTYGFPVDLTG 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
           L+AEE+GL+VD++GF      A+ +S   Q K AGG   I++D  A   L  +G+ ATDD
Sbjct: 427 LIAEEKGLVVDMDGFEEERKLAQLKS---QGKGAGGEDLIMLDIYAIEELRAKGLEATDD 483

Query: 536 SFKFIWFQDHK---------SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           S K+ +  D           + + A+     F+E VV G E G+VL  + FYAEQGGQI+
Sbjct: 484 SPKYNYHSDSSGAYVFECTVATVLALRREKMFVEEVVTGQECGVVLDKTCFYAEQGGQIY 543

Query: 587 DEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           DEG++  +  S      F V+N Q+ GG+V+HIG++    G   VG++V   +D  RR+ 
Sbjct: 544 DEGYLVKVDDSSEDKTEFTVKNAQVRGGYVLHIGTIY---GNLKVGDQVRLFIDEPRRRP 600

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           +  NHT TH+LNFALR VLG+  DQKGS+V P++LRFDF+    +  + ++  E IVN  
Sbjct: 601 VMSNHTATHILNFALRSVLGE-ADQKGSLVAPDRLRFDFTAKGAMSTQQIKEAEEIVNAM 659

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I+A   V++++  LA AK I GLRAVF E YPDPVRVV+IG  V +LL DP        S
Sbjct: 660 IEAAKPVYTQDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTS 719

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSL--------- 811
            E CGGTHL N+  A AF +++EE IAKGIRRI AVT   A KA   A SL         
Sbjct: 720 VEFCGGTHLQNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKAESLRRSLSIMEA 779

Query: 812 ------------EKEVDDASKIEGSLL-------EKNQVRKAQKKVAEENLQKAVK---- 848
                       ++E+ D  +   + +       E+ +  K+ KKV  ++L +A K    
Sbjct: 780 KVKAQTAPNKDVQREIADLGEALATAVIPQWQKDEQRETLKSLKKVM-DDLDRASKADVQ 838

Query: 849 --VATETAEAAASN-GKPFCISRVEVGLDAAAVREAVLKVIEQKG--MPVMVFSTDETTN 903
             V  +T +   SN  +P  I  +E G  A A+ EA LK+ +        M+F+ D    
Sbjct: 839 KRVLEKTKQLIDSNPNQPLVILEMESGASAKALNEA-LKLFKTHSPQTSAMLFTVDNEAG 897

Query: 904 KAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLA 963
           K      VP+ +  ++ L+ SEW+      + G+ G GK   A   G +   +  A+ LA
Sbjct: 898 KITCLCQVPQNA-ANRGLKASEWVQQVSGLMDGK-GGGKDVSAQATGKNVGCLQEALQLA 955

Query: 964 AEFAAMKL 971
             FA ++L
Sbjct: 956 TSFAQLRL 963


>gi|301791808|ref|XP_002930871.1| PREDICTED: alanyl-tRNA synthetase, cytoplasmic-like [Ailuropoda
           melanoleuca]
          Length = 968

 Score =  876 bits (2263), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 470/967 (48%), Positives = 609/967 (62%), Gaps = 65/967 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A+++R  F  FF    H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  ++KL
Sbjct: 7   ASEIRQRFIDFFRRNEHTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A + A ELLT+ +
Sbjct: 67  SRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +P +RLY TYFGGDE AGL PD E + IW    L  +++LP   KDNFWEMGDTGPCGP
Sbjct: 127 GIPLERLYVTYFGGDEAAGLEPDLECKQIWQNLGLDDTKILPGNMKDNFWEMGDTGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G RDAA LVN DDP  +EIWN+VFIQ+NRESDG LKPLP K +DTG+G ER
Sbjct: 187 CSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNRESDGILKPLPKKSIDTGMGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+F+P F+AIQ+ TGARPYSGKVGADDAD +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYSGKVGADDADGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY  E L A  GFF  LV++VV+ +GD FPELK+
Sbjct: 307 VALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRGFFATLVDVVVQSLGDAFPELKK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
               +++II  EE  F KTL +G     +  Q +   K + G  A++L+DTYGFP+DLT 
Sbjct: 367 DPDMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDCKTIPGDTAWLLYDTYGFPVDLTG 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGG--AIVMDADATAALHKRGVLATDD 535
           L+AEE+GL+VD++GF      A+ +S   Q K AGG   I++D  A   L ++G+ ATDD
Sbjct: 427 LIAEEKGLVVDMDGFEEERKLAQLKS---QGKGAGGDDLIMLDIYAIEELREKGLEATDD 483

Query: 536 SFKFIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           S K+ +         F+   + + A+     F+E V  G E G+VL  + FYAEQGGQI+
Sbjct: 484 SPKYNYHSDSSGSYAFESTVATVMALRRDKMFVEEVCTGQECGVVLDKTCFYAEQGGQIY 543

Query: 587 DEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           DEG++  +  +      F V+N Q+ GG+V+HIG++    G   VG++V   +D  RR+ 
Sbjct: 544 DEGYLVKVEDNSEDKTEFTVKNAQVRGGYVLHIGTIY---GSLRVGDQVRLFIDEPRRRP 600

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           +  NHT TH+LNFALR VLG+  DQ+GS+V P++LRFDF+    +  + +++ E I N  
Sbjct: 601 VMSNHTATHILNFALRSVLGE-ADQRGSLVAPDRLRFDFTAKGAMSTQQIKKAEEIANGM 659

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I+A   V++++  LA AK I GLRAVF E YPDPVRVV+IG  V +LL DP        S
Sbjct: 660 IEAAKPVYTQDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTS 719

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLE-------- 812
            E CGGTHL N+  A AF L+SEE IAKGIRRI AVT   A KA   A SL+        
Sbjct: 720 VEFCGGTHLQNSSHAGAFVLVSEEAIAKGIRRIVAVTGAEAQKALRKAESLKNSLSIMEA 779

Query: 813 ---------KEVDDASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASN--- 860
                    K+V       G  L    + + QK    ENL+   K+  +   A+ ++   
Sbjct: 780 KVKAQTVPNKDVQREIADLGEALATAVIPQWQKDEFRENLKSLKKIMDDLDRASKADVQK 839

Query: 861 --------------GKPFCISRVEVGLDAAAVREAVLKVIEQKG--MPVMVFSTDETTNK 904
                          +P  I  +E G  A A+ EA LK+ +        M+F+ D    K
Sbjct: 840 RVLEKTKQLIDSNPNQPLVILEMESGASAKALNEA-LKLFKTHSPQTSAMLFTVDNEAGK 898

Query: 905 AVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAA 964
                 VP+ +  ++ L+ SEW+      + G+ G GK   A   G +   +  A+ LAA
Sbjct: 899 ITCLCQVPQNA-ANRGLKASEWVQQVSGLMDGK-GGGKDVSAQATGKNVGCLQEALQLAA 956

Query: 965 EFAAMKL 971
            FA + L
Sbjct: 957 SFAQLHL 963


>gi|149640708|ref|XP_001506178.1| PREDICTED: alanyl-tRNA synthetase, cytoplasmic isoform 1
           [Ornithorhynchus anatinus]
          Length = 968

 Score =  876 bits (2263), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 474/968 (48%), Positives = 619/968 (63%), Gaps = 67/968 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A+++R  F  FF+   H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  ++KL
Sbjct: 7   ASEIRQRFIDFFKRNRHTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A + A ELLT+ +
Sbjct: 67  SRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +P +RLY TYFGG+E AGL PD E + IW    L  S++LP   KDNFWEMGDTGPCGP
Sbjct: 127 GIPIERLYVTYFGGNEAAGLDPDLECKQIWQNLGLDDSKILPGNMKDNFWEMGDTGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G RDAA LVN DDP  +EIWN+VFIQFNRE+DGSLKPLP K +DTG+G ER
Sbjct: 187 CSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQFNREADGSLKPLPKKSIDTGMGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+F+P F+AIQ+ TGARPY G+VGADD D +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYMGQVGADDTDGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY  E L A  GFF  LV++VV+ +GD FPELK+
Sbjct: 307 VALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASKGFFATLVDVVVQSLGDAFPELKK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
               +++II  EE  F KTL +G     +  Q +  GK + G  A++L+DTYGFP+DLT 
Sbjct: 367 DPEMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDGKTIPGDTAWLLYDTYGFPVDLTG 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
           L+AEE+GL+VD++GF      A+ +S   Q K AGG   I++D  A   L  R +  TDD
Sbjct: 427 LIAEEKGLVVDMDGFEEERKLAQLKS---QGKGAGGEDLIMLDIYAIEELRARDLEVTDD 483

Query: 536 SFKFIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           S K+ +         F+   + +KA+     F++ V  G E G+VL  + FYAEQGGQIF
Sbjct: 484 SPKYNYRANASGSYEFESPVATVKALRREKTFVDEVSTGQECGVVLDKTCFYAEQGGQIF 543

Query: 587 DEGF-IEGLFGS-----FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           DEG+ ++   GS     F V+NVQ+ GG+V+HIG++    G   VG++V   +D  RR+ 
Sbjct: 544 DEGYLVKDDDGSEDKTEFTVKNVQVRGGYVLHIGTVY---GNLKVGDQVRLFIDEPRRRP 600

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           +  NHT TH+LNFALR VLG+  DQ+GS+V P++LRFDF+    +  + +++ E I N  
Sbjct: 601 VMSNHTATHILNFALRSVLGE-ADQRGSLVAPDRLRFDFTAKGAMSTQEIKKTEEIANGM 659

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I+A   V++++  LA AK I GLRAVF E YPDPVRVV+IG  V +LL DP +      S
Sbjct: 660 IQAAKPVYAQDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVAELLEDPSSPAGSLTS 719

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSL--------- 811
            E CGGTHL N+  A AF ++SEE IAKGIRRI AVT   A KA   A SL         
Sbjct: 720 VEFCGGTHLRNSGHAGAFVIVSEEAIAKGIRRIVAVTGTEAQKALRKAESLKTALSVLEA 779

Query: 812 ------------EKEVDDASKIEGSLL----EKNQVR---KAQKKVAEE-------NLQK 845
                       +KE+ D  +   + +     K+++R   KA KK+ ++       ++QK
Sbjct: 780 KVKAQTAPNKDVQKEIADLGETLATAVVPQWHKDELREALKALKKIMDDLDRASKADVQK 839

Query: 846 AVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKG--MPVMVFSTDETTN 903
            V   T+    +  N +P  I  +E G  A A+ EA LK+ +        M+F+ D    
Sbjct: 840 RVLEKTKQLIESQPN-QPLVILEMESGASAKALNEA-LKLFKTHSPQTSAMLFTVDNEAG 897

Query: 904 KAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLA 963
           K      VP+ +  +K L+ SEW+      + G+ G GK   A   G +   +  A+ LA
Sbjct: 898 KITCLCQVPQNA-ANKGLKASEWVQQVSGLMDGK-GGGKDVSAQATGKNVGCLPEAVQLA 955

Query: 964 AEFAAMKL 971
             FA ++L
Sbjct: 956 TSFAQLRL 963


>gi|385304483|gb|EIF48501.1| cytoplasmic alanyl-trna synthetase [Dekkera bruxellensis AWRI1499]
          Length = 993

 Score =  876 bits (2263), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 463/958 (48%), Positives = 608/958 (63%), Gaps = 52/958 (5%)

Query: 58  WPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLS 117
           WPA+KVRDTF  FF+++ H    SS V+P +DPTLLFANAGMNQYKPIFLGT DP++ L+
Sbjct: 44  WPASKVRDTFLNFFKERGHTFVPSSSVIPHDDPTLLFANAGMNQYKPIFLGTIDPSSPLA 103

Query: 118 KLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTK 177
            + RA N+QKCIRAGGKHNDL+DVG+D+YHHTFFEMLGNWSFGDYFK  A+ ++WELLTK
Sbjct: 104 HIKRATNSQKCIRAGGKHNDLEDVGRDSYHHTFFEMLGNWSFGDYFKEGAVGFSWELLTK 163

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPC 236
           VY+L   RLY TYFGGD+KAGL PD E   IW    +  S +LP   KDNFWEMGD GPC
Sbjct: 164 VYKLDPSRLYVTYFGGDKKAGLQPDLETXKIWENIGVSESHILPGSAKDNFWEMGDQGPC 223

Query: 237 GPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGF 296
           GPCSEIHYDR G R+AA LVN DDP  +EIWN VFIQFNRE DGSLKPLP KH+DTG+GF
Sbjct: 224 GPCSEIHYDRIGGRNAADLVNKDDPDVLEIWNNVFIQFNREQDGSLKPLPQKHIDTGMGF 283

Query: 297 ERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRT 356
           ERL SILQN  SNYDTDVF P+F  IQ+ TG R Y+GK G +D D +D AYRV+ADH+RT
Sbjct: 284 ERLVSILQNVRSNYDTDVFRPLFAKIQEITGXRXYTGKFGKEDVDGIDTAYRVLADHVRT 343

Query: 357 LSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFPE 415
           L+FAIADG  P NEGR YVLRRILRR  RY  + +    G FF+ L   +++ + ++FPE
Sbjct: 344 LTFAIADGGVPNNEGRGYVLRRILRRGARYARKYMNYPIGKFFSSLAPTLIEQVKNIFPE 403

Query: 416 LKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTYGFP 472
           L +    I EI+  EEASF +TL +G    E + + A     K+LSG+D + L+DTYGFP
Sbjct: 404 LTKDPQTIYEIMDEEEASFARTLDRGEKLFESYAEKASKTSEKMLSGKDVWRLYDTYGFP 463

Query: 473 LDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLA 532
           +DLT+LMAEE  L +D EGF  A   + + S+S  +K     + +D  A   L     ++
Sbjct: 464 VDLTRLMAEEAXLKIDEEGFEKAKLASWKASKSGNSKGGKKLLKLDVHALGDLQSNDKIS 523

Query: 533 -TDDSFKFIWFQDHKSVIKAIYTGSEFI---ESVVPGNEVGIVLASSSFYAEQGGQIFDE 588
            TDD FK+    D ++ I+AIY   +F+   E +  G ++GI+L+ + FYAEQGGQ+ D 
Sbjct: 524 QTDDQFKYTS-NDVEADIQAIYVDQKFVNSTEGLKEGZQIGIILSKTPFYAEQGGQVXDT 582

Query: 589 G--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
           G   I+G    F V NVQ Y G+V+H G + EG+    VGE VI   D  RR+ +  NHT
Sbjct: 583 GKLVIDGQ-AEFNVENVQTYAGYVLHTGYIEEGS--LKVGESVIASYDETRRESLRHNHT 639

Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD 706
            TH+LNFALR VLGD VDQKGS+V P+KLRFDFS  K +  + +++ E IVN+ IK ++ 
Sbjct: 640 GTHILNFALRSVLGDSVDQKGSLVAPDKLRFDFSFKKALKLDQIKKTEEIVNKIIKDDVK 699

Query: 707 VFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGG 766
           V++K   L EAK INGLRAVFGE YPDPVRVV++G  V++L+ADP N+ WL+   E CGG
Sbjct: 700 VYTKSVPLEEAKKINGLRAVFGESYPDPVRVVSVGNSVDELIADPSNEXWLNXPIEFCGG 759

Query: 767 THLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEG--- 823
           TH+S + + +   +  E GIAKGIRRI A+T   A K    A   E  +D+  K+     
Sbjct: 760 THVSRSSDIKFLVITEEGGIAKGIRRIXALTGEEALKTKTVANEFEAVLDNIEKMPFGNX 819

Query: 824 -----------------SLLEKNQVRKAQKKV---AEENLQKAVKVATETAEAAASN--- 860
                            S+L+K  ++    K+    +  L+K  K AT+ AE   S    
Sbjct: 820 KQKALKANTTKLGKLIVSILDKESLKSKFNKIDKDVKNELKKRQKAATKKAEEEISQYFE 879

Query: 861 ---GKPFCISRVEVGLDAAAVREA---VLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEK 914
                 F    ++ G +A  + EA   + K  + K + +++ ++++      V  GV   
Sbjct: 880 EHPDSQFVALHIDTGSNARVITEAFNYLKKNFKGKSLFIIIGTSEDQR----VAQGVYIS 935

Query: 915 SDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKLR 972
            +  K L  S+    A + + G+ G G+G +  G G     +  A+D   +    KL+
Sbjct: 936 DEHLKSLASSDVAKVASEYIGGKAG-GRGNICQGMGDKPDGINKAVDAVTKLFEEKLK 992


>gi|219124287|ref|XP_002182439.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217406400|gb|EEC46340.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 955

 Score =  876 bits (2263), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 487/959 (50%), Positives = 632/959 (65%), Gaps = 56/959 (5%)

Query: 52  DPQVVEWPATKVRDTFFKFF-EDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTA 110
           D  V+EWP  KVRDTF  +F E   HV W SSP VPV+DPTLLF NAGMNQYKP+FLGT 
Sbjct: 9   DTPVLEWPMEKVRDTFKNYFVEQHGHVFWPSSPCVPVDDPTLLFTNAGMNQYKPLFLGTC 68

Query: 111 DPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEW 170
           DPN ++SKLTRA N+QKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFGDYFK  AI+ 
Sbjct: 69  DPNLEMSKLTRAVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKAGAIDM 128

Query: 171 AWELLTKVYRLPADRLYATYFGGDEKAGLAP-DNEARDIWLKFLPASRVLPFGCKDNFWE 229
           AW+ LT  + L  +RLYATYF GDE   L P D EAR +WL++LP  RVLPF  +DNFWE
Sbjct: 129 AWQCLTVTFGLDPERLYATYFAGDE---LTPVDEEARQLWLRYLPDDRVLPFDARDNFWE 185

Query: 230 MGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKH 289
           MG TGPCGPC+EIHYDR G RDA+ LVN D P  +EIWN+VFIQ+NRE+DGSL+PLPA+H
Sbjct: 186 MGATGPCGPCTEIHYDRIGGRDASKLVNADLPDVMEIWNVVFIQYNREADGSLRPLPAQH 245

Query: 290 VDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRV 349
           VDTG+GFERLTSILQN  SNYDTD+F+P+F AIQ  TGARPY+ KVG +D + +DMAYRV
Sbjct: 246 VDTGMGFERLTSILQNVDSNYDTDIFIPLFTAIQNITGARPYAKKVGKEDPEYIDMAYRV 305

Query: 350 VADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVM 409
           VADHIRTL FAI DG+ P N+GR YVLRR+LRRAVRYG + L A+ GFF  LV   V VM
Sbjct: 306 VADHIRTLCFAITDGAVPSNDGRGYVLRRVLRRAVRYGRQNLGAELGFFAKLVPAFVDVM 365

Query: 410 GDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG-KVLSGQDAFILWDT 468
           G  FPE+ +++ ++  II  EE SF +TL KG++KF + A+ V   ++ SG DA  L+ +
Sbjct: 366 GSAFPEVVEKQEYVTGIIQEEEESFSRTLDKGLQKFNELAEKVGADQIFSGADAHFLYTS 425

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQ-NKQAGGA---IVMDADATAA 524
            GFP+DLT+LMAEE+G+ ++ E F   M E  + S++A   K AGG+   + + A+ T+ 
Sbjct: 426 MGFPVDLTELMAEEKGMTLNKEEFEAKMQEEHDISQAAHLAKMAGGSGKDMRLVAEQTSY 485

Query: 525 LHKRGVLATDDSFKFIWFQD-HKSVIKAIYTGSE-------FIESVVP-GNEVGIVLASS 575
           L  + + ATDD+ K++W ++    V+KA + G         F+ S+ P  + VGIVL  S
Sbjct: 486 LVGQNISATDDAAKYVWHEELADCVVKACFIGRNETEDMIGFVGSISPESSAVGIVLDKS 545

Query: 576 SFYAEQGGQIFDEGFIEGLFGSFY-VRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVD 634
           SFYAE GGQ++D G +    G+   + NVQ YG FV+H+G +   +G  SVG+ V C VD
Sbjct: 546 SFYAEAGGQVYDVGTLTSSTGAVVKITNVQAYGQFVLHLGEV--ASGTLSVGDTVKCSVD 603

Query: 635 YDRRKLIAPNHTCTHMLNFALREVLGDH------------VDQKGSVVLPEKLRFDFSHG 682
           Y RR  IA NHT TH+LN ALREVL               VDQKGS+V   KLRFDFS  
Sbjct: 604 YVRRAPIASNHTMTHVLNHALREVLIKRPEKESGKTSTLTVDQKGSLVDETKLRFDFSWS 663

Query: 683 KPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIG- 741
             + PE L  +E +  ++I   + V +  A L +A+ I+ LRAVFGE YPDPVRVVA+  
Sbjct: 664 GQLTPEQLAEVEKLCMDRIVNAVPVDAYVAPLGDAQQISSLRAVFGEKYPDPVRVVAVSD 723

Query: 742 RKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLA 801
             V ++LA+P++ +W   S E CGGTHL+NT+EAEAF LL+EEGIAKGIRRITA+TTG A
Sbjct: 724 HAVPEMLANPQDSQWNEYSVEFCGGTHLTNTKEAEAFVLLAEEGIAKGIRRITAITTGEA 783

Query: 802 YKAFEAACSLEKEVDDASKIEGSLLEKNQVRKAQKKV------AEENLQKAVKVATETAE 855
            KA   A   E ++  A  ++G  LE + V++   ++      A + +Q   ++AT T +
Sbjct: 784 KKAIALANEFESKLTAAEVVQGDDLE-STVKQLSAELDGLDIAAVKKMQFREQLATMTKQ 842

Query: 856 AAASN-----GKPFCISRVEVGLD---AAAVREAVLKVIEQKGMPVMVFSTDETTNKAVV 907
             A       G    + R + G++   A +V  A  K ++ K +  ++ + D   ++ +V
Sbjct: 843 VLAYKKQKLAGGSKVVMRFDFGVEGKVAKSVMTAFGKQVKDKAL--LLVTADPEADRFMV 900

Query: 908 CAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEF 966
            AG P+     K L    W+ AA   L  + G GK   A  Q +    V   ++ A +F
Sbjct: 901 IAGAPKA---MKDLNCKAWIEAATDGLDAK-GGGKPDSAQYQVSGVEAVDTVLEKARKF 955


>gi|197099554|ref|NP_001125391.1| alanine--tRNA ligase, cytoplasmic [Pongo abelii]
 gi|75042108|sp|Q5RC02.1|SYAC_PONAB RecName: Full=Alanine--tRNA ligase, cytoplasmic; AltName:
           Full=Alanyl-tRNA synthetase; Short=AlaRS
 gi|55727911|emb|CAH90708.1| hypothetical protein [Pongo abelii]
          Length = 968

 Score =  875 bits (2262), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 468/966 (48%), Positives = 617/966 (63%), Gaps = 63/966 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A+K+R  F  FF+   H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  ++K 
Sbjct: 7   ASKIRQRFIDFFKRNEHTYIHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKP 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A + A ELLT+ +
Sbjct: 67  SRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +P +RLY TYFGGDE AGL PD E + IW    L  +++LP   KDNFWEMGDTGPCGP
Sbjct: 127 GIPIERLYVTYFGGDEAAGLEPDLECKQIWQNLGLDDTKILPGNMKDNFWEMGDTGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G RDAA LVN DDP  +EIWN+VFIQ+NRE+DG LKPLP K +DTG+G ER
Sbjct: 187 CSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNREADGILKPLPKKSIDTGMGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+F+P F+AIQ+ TGARPY+GKVGA+DAD +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY  E L A  GFF  LV++VV+ +GD FPELK+
Sbjct: 307 VALADGGRPDNTGRGYVLRRILRRAVRYAHEKLNASRGFFATLVDVVVQSLGDAFPELKK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
               +++II  EE  F KTL +G     +  Q +   K + G  A++L+DTYGFP+DLT 
Sbjct: 367 DPDMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTG 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
           L+AEE+GL+VD++GF      A+ +S   Q K AGG   I++D  A   L  R +  TDD
Sbjct: 427 LIAEEKGLVVDMDGFEEERKLAQLKS---QGKGAGGEDLIMLDIYAIEELRARDLEVTDD 483

Query: 536 SFKFIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           S K+ +         F++  + + A+     F+E V  G E G+VL  + FYAEQGGQI+
Sbjct: 484 SPKYNYHLDSSGSYVFENTVATVMALRREKMFVEEVSTGQECGVVLDKTCFYAEQGGQIY 543

Query: 587 DEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           DEG++  +  S      F V+N Q+ GG+V+HIG++    G   VG++V   +D  RR+ 
Sbjct: 544 DEGYLVKVDDSSEDKTEFTVKNAQVRGGYVLHIGTIY---GDLKVGDQVWLFIDEPRRRP 600

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           I  NHT TH+LNFALR VLG+  DQKGS+V P++LRFDF+    +  + +++ E I NE 
Sbjct: 601 IMSNHTATHILNFALRSVLGE-ADQKGSLVAPDRLRFDFTAKGAMSTQQIKKAEEIANEM 659

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I+A   V++++ +LA AK I GLRAVF E YPDPVRVV+IG  V +LL DP        S
Sbjct: 660 IEAAKPVYTQDCSLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTS 719

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEK------- 813
            E CGGTHL N+  A AF +++EE IAKGIRRI AVT   A KA   A SL+K       
Sbjct: 720 VEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKAGSLKKPLSVMEA 779

Query: 814 --------------EVDDASKIEGSLL----EKNQVRKAQKKVAE--ENLQKAVK----- 848
                         E+ D  +   + +    +K+++R+  K + +  ++L +A K     
Sbjct: 780 KVKAQTAPNKDVQREIADLGEALATAVIPQWQKDELRETLKSLKKVMDDLDRASKADVQK 839

Query: 849 -VATETAEAAASN-GKPFCISRVEVGLDAAAVREAV-LKVIEQKGMPVMVFSTDETTNKA 905
            V  +T +   SN  +P  I  +E G  A A+ EA+ L  +       M+F+ D    K 
Sbjct: 840 RVLEKTKQLIDSNPNQPLVILEMESGASAKALNEALKLFKMHSPQTAAMLFTVDNEAGKI 899

Query: 906 VVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAE 965
                VP+ +  ++ L+ SEW+      + G+ G GK   A   G +   +  A+ LA  
Sbjct: 900 TCLCQVPQNA-ANRGLKASEWVQQVSGLMDGK-GGGKDVSAQATGKNVGCLQEALQLATS 957

Query: 966 FAAMKL 971
           FA ++L
Sbjct: 958 FAQLRL 963


>gi|365758219|gb|EHN00072.1| Ala1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
          Length = 958

 Score =  875 bits (2262), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 457/944 (48%), Positives = 605/944 (64%), Gaps = 44/944 (4%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           +W A  VR+TF  +F+ K H   KSSPVVP +DPTLLFANAGMNQYKPIFLGT DP +  
Sbjct: 8   KWTAANVRNTFLDYFKSKEHKFVKSSPVVPFDDPTLLFANAGMNQYKPIFLGTVDPASDF 67

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
             L RA N+QKCIRAGGKHNDL+DVGKD+YHHTFFEMLGNWSFGDYFK EA+ ++W LLT
Sbjct: 68  YTLKRAYNSQKCIRAGGKHNDLEDVGKDSYHHTFFEMLGNWSFGDYFKIEAVTYSWTLLT 127

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
           +VY +P DRLY TYF GDEK GL PD EAR++W    +P   +LP   KDNFWEMGD GP
Sbjct: 128 EVYGIPKDRLYVTYFEGDEKLGLEPDIEARELWRNAGVPDDHILPGNAKDNFWEMGDQGP 187

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPCSEIHYDR G R+AASLVN DDP  +E+WN+VFIQFNRE DGSLK LPAKH+DTG+G
Sbjct: 188 CGPCSEIHYDRIGGRNAASLVNMDDPDVLEVWNLVFIQFNREQDGSLKSLPAKHIDTGMG 247

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
           FERL S+LQ+  SNYDTDVF P+F+ IQ+ T  +PYSGK G DD+D VD AYRV+ADH+R
Sbjct: 248 FERLVSVLQDVRSNYDTDVFTPLFERIQEITSVKPYSGKFGEDDSDGVDTAYRVLADHVR 307

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFP 414
           TL+FA+ADG  P NEGR YVLRRILRR  RY  + +    G FF+ L   +++ + D+FP
Sbjct: 308 TLTFALADGGVPNNEGRGYVLRRILRRGARYARKYMNYPIGNFFSTLAPTLIEQVQDIFP 367

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTYGF 471
           EL +  A + EI+  EEASF KTL +G    EK+  AA   + + L G+  + L+DTYGF
Sbjct: 368 ELAKDPAFLFEILDEEEASFAKTLDRGERLFEKYASAASKTESRTLDGKQVWRLYDTYGF 427

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           P+DLT+LMAEE+GL +D  GF  A  E+ E S+    K     I ++    + L+   V 
Sbjct: 428 PVDLTELMAEEQGLKIDGPGFEKAKQESYEASKRGGKKDQSDLIKLNVHELSELNDANVP 487

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVV-PGNEVGIVLASSSFYAEQGGQIFDEG- 589
            T+D FK+       +++K ++ G++F+  +  PG + GI+L  + FYAEQGGQ +D G 
Sbjct: 488 KTNDEFKYGSANVESTILK-LHDGTKFVNEITEPGRKYGIILDKTCFYAEQGGQEYDTGK 546

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
            +      F V NVQ+Y GFV H GSL E  G+ SVG+++I   D  RR  I  NHT TH
Sbjct: 547 IVIDDAAEFNVENVQLYNGFVFHTGSLEE--GKLSVGDKIIASFDELRRFPIKNNHTGTH 604

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +LNFAL+E LG+ +DQKGS+V  EKLRFDFS+ K V  + L+ IE   N+QIK  L VF 
Sbjct: 605 ILNFALKETLGNDIDQKGSLVASEKLRFDFSYKKAVTGDELKNIEDTCNQQIKENLQVFY 664

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
           KE  L  AK I+G+RAVFGE YPDPVRVV++G+ +E+LLA+  N+EW   S E CGGTH+
Sbjct: 665 KEIPLELAKSIDGVRAVFGETYPDPVRVVSVGKPIEELLANSANEEWTKYSIEFCGGTHV 724

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK--------- 820
           + T + + F +L E GIAKGIRRI AVT   A++A   A     ++D A K         
Sbjct: 725 NKTGDIKYFVILEESGIAKGIRRIVAVTGTEAFEAQRLAERFAADLDAADKLPFSPVKEK 784

Query: 821 -----------IEGSLLEKNQVR----KAQKKVAEENLQKAVKVATETAEAA-----ASN 860
                      +  S++ KN+++    K +K V +E   +A K   +T +        + 
Sbjct: 785 KLKELGVKLGQLSISVITKNELKQKFNKIEKAVKDEVKSRAKKENKQTLDEVKTFFETNE 844

Query: 861 GKPFCISRVEVGLDAAAVREAVLKVIEQ---KGMPVMVFSTDETTNKAVVCAGVPEKSDQ 917
             P+ +  +++  +A A+ EA+  +      K   + + + ++   +      +   +  
Sbjct: 845 NTPYFVKFIDISPNAKAITEAINYMKSNDSVKDKSIYLLAGNDPEGRVAHGCYISNVA-L 903

Query: 918 SKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMD 961
           +K ++ SE        + G+ G GKG +  G G   A +  A+D
Sbjct: 904 AKGVDGSELAKKVSSVIGGKAG-GKGNVFQGMGDKPAAIQNAVD 946


>gi|402912107|ref|XP_003918629.1| PREDICTED: alanine--tRNA ligase, cytoplasmic [Papio anubis]
          Length = 968

 Score =  875 bits (2261), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 471/967 (48%), Positives = 619/967 (64%), Gaps = 65/967 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A+++R  F  FF+   H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  ++KL
Sbjct: 7   ASEIRLRFIDFFKRNEHTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A + A ELLT+ +
Sbjct: 67  SRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +P +RLY TYFGGDE AGL PD E + IW    L  S++LP   KDNFWEMGDTGPCGP
Sbjct: 127 GIPIERLYVTYFGGDEAAGLEPDLECKQIWQNLGLDDSKILPGNMKDNFWEMGDTGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G RDAA LVN DDP  +EIWN+VFIQ+NRE+DG LKPLP K +DTG+G ER
Sbjct: 187 CSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNREADGILKPLPKKSIDTGMGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+F+P F+AIQ+ TGARPY+GKVGA+DAD +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY  E L A  GFF  LV++VV+ +GD FPELK+
Sbjct: 307 VALADGGRPDNTGRGYVLRRILRRAVRYAHEKLNASRGFFATLVDVVVQSLGDAFPELKK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
               +++II  EE  F KTL +G     +  Q +   K + G  A++L+DTYGFP+DLT 
Sbjct: 367 DPDMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTG 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
           L+AEE+GL+VD++GF      A+ +S   Q K AGG   I++D  A   L  RG+  TDD
Sbjct: 427 LIAEEKGLVVDMDGFEEERKLAQLKS---QGKGAGGEDLIMLDIYAIEELRARGLEVTDD 483

Query: 536 SFKFIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           S K+ +         F++  + + A+     F+E V  G E G+VL  + FYAEQGGQI+
Sbjct: 484 SPKYNYHLDFSGSYVFENTVATVMALRREKMFVEEVSTGQECGVVLDKTCFYAEQGGQIY 543

Query: 587 DEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           DEG++  +  S      F V+N Q+ GG+V+HIG++    G   VG++V   +D  RR+ 
Sbjct: 544 DEGYLVKVDDSSEDKTEFTVKNAQVRGGYVLHIGTIY---GDLKVGDQVRLFIDEPRRRP 600

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           I  NHT TH+LNFALR VLG+  DQKGS+V P++LRFDF+    +  + +++ E I NE 
Sbjct: 601 IMSNHTATHILNFALRSVLGE-ADQKGSLVAPDRLRFDFTAKGAMSTQQIKKAEEIANEM 659

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I+A   V++++  LA AK I GLRAVF E YPDPVRVV+IG  V +LL DP        S
Sbjct: 660 IEAAKPVYTQDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTS 719

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEK------- 813
            E CGGTHL N+  A AF +++EE IAKGIRRI AVT   A KA   A SL+K       
Sbjct: 720 VEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGTEAQKALRKAESLKKSLSVMEA 779

Query: 814 --------------EVDDASKIEGSLL----EKNQVRKAQKKVAE--ENLQKAVK----- 848
                         E+ D  +   + +    +K+++R+  K + +  ++L +A K     
Sbjct: 780 KVKAQTAPNKDVQREIADLGEALATAVIPQWQKDELRETLKSLKKVMDDLDRASKADVQK 839

Query: 849 -VATETAEAAASN-GKPFCISRVEVGLDAAAVREAVLKVIEQKG--MPVMVFSTDETTNK 904
            V  +T +   SN  +P  I  +E G  A A+ EA LK+ +        M+F+ D    K
Sbjct: 840 RVLEKTKQLIDSNPNQPLVILEMESGASAKALNEA-LKLFKTHSPQTSAMLFTVDNEAGK 898

Query: 905 AVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAA 964
                 VP+ +  ++ L+ SEW+      + G+ G GK   A   G +   +  A+ LA 
Sbjct: 899 ITCLCQVPQNA-ANRGLKASEWVQQVSGLMDGK-GGGKDVSAQATGKNIGCLQEALQLAT 956

Query: 965 EFAAMKL 971
            FA ++L
Sbjct: 957 SFAQLRL 963


>gi|26336489|dbj|BAC31927.1| unnamed protein product [Mus musculus]
          Length = 968

 Score =  875 bits (2261), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 472/968 (48%), Positives = 614/968 (63%), Gaps = 67/968 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R+ F  FF    H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  ++KL
Sbjct: 7   AREIRERFINFFRRNEHTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A + A ELLT+ +
Sbjct: 67  SRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +P +RLY TYFGGDE AGL PD E R IW    L  +R+LP   KDNFWEMGDTGPCGP
Sbjct: 127 GIPVERLYVTYFGGDEAAGLEPDLECRQIWQNLGLDEARILPGNMKDNFWEMGDTGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G RDAA LVN DDP  +EIWN+VFIQ+NRESDG LKPLP K +DTG+G ER
Sbjct: 187 CSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNRESDGVLKPLPKKSIDTGMGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+FMP F+AIQ+ TGARPY+GKVGA+DAD +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFMPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY  E L A  GFF  LV++VV+ +GD FPELK+
Sbjct: 307 VALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRGFFATLVDVVVQSLGDAFPELKK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
               +++II  EE  F KTL +G     +  Q +   K + G  A++L+DTYGFP+DLT 
Sbjct: 367 DPDMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDCKTIPGDTAWLLYDTYGFPVDLTG 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
           L+AEE+GL+VD+ GF    +E R     +Q K AG    I++D  A   L  +G+ ATDD
Sbjct: 427 LIAEEKGLVVDMNGFE---EERRLAQLKSQGKGAGDEDLIMLDIYAIEELRAKGLEATDD 483

Query: 536 SFKFIWFQDHK---------SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           S K+ +  D           + + A+     F++ VV G E G+VL  + FYAEQGGQI+
Sbjct: 484 SPKYNYQSDSSGSYVFECTVATVLALRREKMFVDEVVTGQECGVVLDKTCFYAEQGGQIY 543

Query: 587 DEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           DEG++  +  S      F V+N Q+ GG+V+HIG++    G   VG++V   +D  RR+ 
Sbjct: 544 DEGYLVKVDDSSEDKTEFTVKNAQVRGGYVLHIGTIY---GNLKVGDQVRLFIDEPRRRP 600

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           +  NHT TH+LNFALR VLG+  DQKGS+V P++LRFDF+    +  + +++ E IVN  
Sbjct: 601 VMSNHTATHILNFALRSVLGE-ADQKGSLVTPDRLRFDFTAKGAMSTQQIKKAEEIVNGM 659

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I+A   V++++  LA AK I GLRAVF E YPDPVRVV+IG  V +LL DP        S
Sbjct: 660 IEAAKPVYTQDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPCGPAGSLTS 719

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEK------- 813
            E CGGTHL N+  A AF +++EE IAKGIRRI AVT   A KA   + +L+K       
Sbjct: 720 VEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKSETLKKSLSAMEA 779

Query: 814 --------------EVDDASKIEGSLL-------EKNQVRKAQKKVAEENLQKAVK---- 848
                         E+ D  +   + +       E+ +  K+ KKV  ++L +A K    
Sbjct: 780 KVKAQTAPNKDVQREIADLGEALATAVIPQWQKDEQRETLKSLKKVM-DDLDRASKADVQ 838

Query: 849 --VATETAEAAASN-GKPFCISRVEVGLDAAAVREAVLKVIEQKG--MPVMVFSTDETTN 903
             V  +T +   SN  +P  I  +E G  A A+ EA LK+ +        M+F+ D    
Sbjct: 839 KRVLEKTKQLIDSNPNQPLVILEMESGASAKALNEA-LKLFKTHSPQTSAMLFTVDNEAG 897

Query: 904 KAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLA 963
           K      VP+ +  ++ L+ SEW+      + G+ G GK   A   G +   +  A+ LA
Sbjct: 898 KITCLCQVPQNA-ANRGLKASEWVQQVSGLMDGK-GGGKDMSAQATGKNVGCLQEALQLA 955

Query: 964 AEFAAMKL 971
             FA ++L
Sbjct: 956 TSFAQLRL 963


>gi|34610207|ref|NP_666329.2| alanine--tRNA ligase, cytoplasmic [Mus musculus]
 gi|47117019|sp|Q8BGQ7.1|SYAC_MOUSE RecName: Full=Alanine--tRNA ligase, cytoplasmic; AltName:
           Full=Alanyl-tRNA synthetase; Short=AlaRS
 gi|23270912|gb|AAH33273.1| Alanyl-tRNA synthetase [Mus musculus]
 gi|26351767|dbj|BAC39520.1| unnamed protein product [Mus musculus]
 gi|148679538|gb|EDL11485.1| alanyl-tRNA synthetase, isoform CRA_b [Mus musculus]
          Length = 968

 Score =  875 bits (2261), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 472/968 (48%), Positives = 614/968 (63%), Gaps = 67/968 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R+ F  FF    H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  ++KL
Sbjct: 7   AREIRERFINFFRRNEHTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A + A ELLT+ +
Sbjct: 67  SRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +P +RLY TYFGGDE AGL PD E R IW    L  +R+LP   KDNFWEMGDTGPCGP
Sbjct: 127 GIPVERLYVTYFGGDEAAGLEPDLECRQIWQNLGLDEARILPGNMKDNFWEMGDTGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G RDAA LVN DDP  +EIWN+VFIQ+NRESDG LKPLP K +DTG+G ER
Sbjct: 187 CSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNRESDGVLKPLPKKSIDTGMGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+FMP F+AIQ+ TGARPY+GKVGA+DAD +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFMPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY  E L A  GFF  LV++VV+ +GD FPELK+
Sbjct: 307 VALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRGFFATLVDVVVQSLGDAFPELKK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
               +++II  EE  F KTL +G     +  Q +   K + G  A++L+DTYGFP+DLT 
Sbjct: 367 DPEMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDCKTIPGDTAWLLYDTYGFPVDLTG 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
           L+AEE+GL+VD+ GF    +E R     +Q K AG    I++D  A   L  +G+ ATDD
Sbjct: 427 LIAEEKGLVVDMNGFE---EERRLAQLKSQGKGAGDEDLIMLDIYAIEELRAKGLEATDD 483

Query: 536 SFKFIWFQDHK---------SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           S K+ +  D           + + A+     F++ VV G E G+VL  + FYAEQGGQI+
Sbjct: 484 SPKYNYQSDSSGSYVFECTVATVLALRREKMFVDEVVTGQECGVVLDKTCFYAEQGGQIY 543

Query: 587 DEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           DEG++  +  S      F V+N Q+ GG+V+HIG++    G   VG++V   +D  RR+ 
Sbjct: 544 DEGYLVKVDDSSEDKTEFTVKNAQVRGGYVLHIGTIY---GNLKVGDQVRLFIDEPRRRP 600

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           +  NHT TH+LNFALR VLG+  DQKGS+V P++LRFDF+    +  + +++ E IVN  
Sbjct: 601 VMSNHTATHILNFALRSVLGE-ADQKGSLVAPDRLRFDFTAKGAMSTQQIKKAEEIVNGM 659

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I+A   V++++  LA AK I GLRAVF E YPDPVRVV+IG  V +LL DP        S
Sbjct: 660 IEAAKPVYTQDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPCGPAGSLTS 719

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEK------- 813
            E CGGTHL N+  A AF +++EE IAKGIRRI AVT   A KA   + +L+K       
Sbjct: 720 VEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKSETLKKSLSAMEA 779

Query: 814 --------------EVDDASKIEGSLL-------EKNQVRKAQKKVAEENLQKAVK---- 848
                         E+ D  +   + +       E+ +  K+ KKV  ++L +A K    
Sbjct: 780 KVKAQTAPNKDVQREIADLGEALATAVIPQWQKDEQRETLKSLKKVM-DDLDRASKADVQ 838

Query: 849 --VATETAEAAASN-GKPFCISRVEVGLDAAAVREAVLKVIEQKG--MPVMVFSTDETTN 903
             V  +T +   SN  +P  I  +E G  A A+ EA LK+ +        M+F+ D    
Sbjct: 839 KRVLEKTKQLIDSNPNQPLVILEMESGASAKALNEA-LKLFKTHSPQTSAMLFTVDNEAG 897

Query: 904 KAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLA 963
           K      VP+ +  ++ L+ SEW+      + G+ G GK   A   G +   +  A+ LA
Sbjct: 898 KITCLCQVPQNA-ANRGLKASEWVQQVSGLMDGK-GGGKDMSAQATGKNVGCLQEALQLA 955

Query: 964 AEFAAMKL 971
             FA ++L
Sbjct: 956 TSFAQLRL 963


>gi|351701755|gb|EHB04674.1| Alanyl-tRNA synthetase, cytoplasmic [Heterocephalus glaber]
          Length = 983

 Score =  875 bits (2260), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 475/983 (48%), Positives = 617/983 (62%), Gaps = 82/983 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A+++R+ F  FF+   H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  L+KL
Sbjct: 7   ASEIRERFIDFFKRNEHTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPLAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A + A ELLT+ +
Sbjct: 67  SRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKESACKMALELLTQEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +P DRLY TYFGGDE AGL PD E + IW    L  SR+LP   KDNFWEMGDTGPCGP
Sbjct: 127 GIPVDRLYVTYFGGDEAAGLEPDLECKQIWQTLGLDDSRILPGNMKDNFWEMGDTGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G RDA+ LVN DDP  +EIWN+VFIQ+NRE+DG+LKPLP K +DTG+G ER
Sbjct: 187 CSEIHYDRIGGRDASYLVNQDDPNVLEIWNLVFIQYNRETDGTLKPLPKKSIDTGMGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+F+P F+AIQ+ TGARPY+GKVGA+DAD +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY  E L A  GFF  LV++VV+ +GD FPELK+
Sbjct: 307 VALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRGFFATLVDVVVQSLGDAFPELKK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
               +++II  EE  F KTL +G     +  Q +   K + G  A++L+DTYGFP+DLT 
Sbjct: 367 DPDMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDCKTIPGDTAWLLYDTYGFPVDLTG 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
           L+AEE+GL+VD++GF      A+ +S   Q K AGG   I++D  A   L  RG+ ATDD
Sbjct: 427 LIAEEKGLVVDMDGFEEERKLAQLKS---QGKGAGGEDLIMLDIYAIEELRARGLEATDD 483

Query: 536 SFKFIWFQDHK---------SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           S K+ +  D           + + A+     F+E V  G E G++L  + FYAEQGGQI+
Sbjct: 484 SPKYNYHSDSSGGYLFESAVATVLALRREKMFVEEVSTGQECGVLLDKTCFYAEQGGQIY 543

Query: 587 DEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           DEG++  +  S      F V+N Q+ GG+V+HIG++    G   VG++V   +D  RR+ 
Sbjct: 544 DEGYLVKVDDSSEDKTEFTVKNAQVRGGYVLHIGTIY---GNLKVGDQVRLFIDEPRRRP 600

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           I  NHT TH+LNFALR VLG+  DQKGS+V P++LRFDF+    +  + +++ E   NE 
Sbjct: 601 IMSNHTATHILNFALRSVLGE-ADQKGSLVAPDRLRFDFTAKGAMSTQQIKKAEETGNEM 659

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           IKA   V++++  LA AK I GLRAVF E YPDPVRVV+IG  V +LL DP        S
Sbjct: 660 IKAAKPVYTQDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTS 719

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKE------ 814
            E CGGTHL N+  A AF +++EE IAKGIRRI AVT   A KA   A SL+K       
Sbjct: 720 VEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKAESLKKSFSTMES 779

Query: 815 ----------------VDDASKIEGSLL---EKNQVR---KAQKKVAEE-------NLQK 845
                           VD    +  +++   +K+++R   K+ KKV ++       N+QK
Sbjct: 780 KVKAQTAPNKDVQREIVDLGEALATAVIPQWQKDELRETLKSLKKVMDDLDRASKANVQK 839

Query: 846 AVKVATETAEAAASN-GKPFCISRVEVGLDAAAVR--------------EAVLKVIEQKG 890
             +V   T +   SN  +P  I  +E G  A A R                 LK+ +   
Sbjct: 840 --RVLERTKQLIDSNPNQPLVILEMESGASAKATRGWGPGTTLPVTDALNEALKLFKTHS 897

Query: 891 --MPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASG 948
                M+F+ D    K      VP+ +  ++ L+ SEW+      + G+ G GK   A  
Sbjct: 898 PETSAMLFTVDNEAGKITCLCQVPQNA-ANRGLKASEWVQQVSGLMDGK-GGGKDVSAQA 955

Query: 949 QGTDAAQVTPAMDLAAEFAAMKL 971
            G +   +  A+ LA  FA + L
Sbjct: 956 TGKNVGCLQEALQLATSFAQLHL 978


>gi|260942927|ref|XP_002615762.1| hypothetical protein CLUG_04644 [Clavispora lusitaniae ATCC 42720]
 gi|238851052|gb|EEQ40516.1| hypothetical protein CLUG_04644 [Clavispora lusitaniae ATCC 42720]
          Length = 964

 Score =  875 bits (2260), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 460/954 (48%), Positives = 611/954 (64%), Gaps = 47/954 (4%)

Query: 58  WPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLS 117
           W A+ VR TF  +F++K+H    SS VVP NDPTLLFANAGMNQYKPIFLGT DP ++ +
Sbjct: 18  WSASTVRSTFLDYFKNKSHTYVPSSSVVPHNDPTLLFANAGMNQYKPIFLGTVDPTSEFA 77

Query: 118 KLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTK 177
            L RA N+QKCIRAGGKHNDL+DVG+D+YHHTFFEMLGNWSFGDYFK EAI ++WELLT+
Sbjct: 78  TLKRAVNSQKCIRAGGKHNDLEDVGRDSYHHTFFEMLGNWSFGDYFKKEAIAYSWELLTE 137

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPC 236
           VY+L  DRLY TYF GDEK GL PD EA++ WL   +    +LP    DNFWEMGD GPC
Sbjct: 138 VYKLDKDRLYVTYFEGDEKNGLEPDLEAKEYWLSVGVAPDHILPGDAHDNFWEMGDQGPC 197

Query: 237 GPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGF 296
           GPCSEIHYDR G R+AASLVN DDP  +E+WNIVFIQ+NRE+D SLKPLP+KH+DTG+GF
Sbjct: 198 GPCSEIHYDRIGGRNAASLVNQDDPNVLEVWNIVFIQYNREADSSLKPLPSKHIDTGMGF 257

Query: 297 ERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRT 356
           ERL S+LQ+K SNYDTDVF PIF+ I+  TG RPY+GK GA+D D +D AYRV+ADH+RT
Sbjct: 258 ERLVSVLQDKSSNYDTDVFQPIFEEIRNITGVRPYTGKFGAEDVDGIDTAYRVIADHVRT 317

Query: 357 LSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFPE 415
           L+FAI+DG  P NEGR YVLRRILRR  RY  + +    G FF  LV++V++    +FPE
Sbjct: 318 LTFAISDGGVPNNEGRGYVLRRILRRGARYVRKYMNCPIGSFFQQLVDVVIENNSSIFPE 377

Query: 416 LKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTYGFP 472
           + + +  ++EI+  EE SF KTL +G    E++   A     + LSG+D + L+DTYGFP
Sbjct: 378 IAKNKDMLKEILMEEEVSFAKTLDRGEKLFEQYAIIASKTPEQTLSGKDVWRLYDTYGFP 437

Query: 473 LDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAAL-HKRGVL 531
           +DLT+LMAEE GL +D E F  A +E+RE S++   K     I +D  A + L +   + 
Sbjct: 438 VDLTRLMAEEAGLKIDEEAFEKAKEESREASKATNTKGGATLIKLDVHALSELDNNESIT 497

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVV-PGNEVGIVLASSSFYAEQGGQIFDEG- 589
            T+D +K+    + +S I AIY GS+F++++   G + GI+L  + FYAEQGGQ +D G 
Sbjct: 498 KTNDVYKY-GLDNIESKIVAIYDGSKFVDTISEAGQQFGIILDRTPFYAEQGGQEYDTGS 556

Query: 590 -FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
             I+G    F V NVQ YG +++H G++ EG     + + VI   D  RR  I  NHT T
Sbjct: 557 LVIDG-SAEFAVTNVQSYGSYILHTGTMVEGT--LKLNDNVIATYDELRRWPIRNNHTGT 613

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+LNFAL+EVLGD +DQKGS+V PEKLRFDFSH + + P+ L ++E+I +E IK+   V+
Sbjct: 614 HVLNFALKEVLGDGIDQKGSLVAPEKLRFDFSHKQALTPKELEQVENISSEIIKSNKQVY 673

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
           ++E  L +AK I G+RAVFGE YPDPVRVV+IG  V DLL DP N++W  +S E CGGTH
Sbjct: 674 AEEVELTKAKQIAGVRAVFGETYPDPVRVVSIGVAVADLLKDPTNQDWTKLSIEFCGGTH 733

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEG----- 823
           ++ T + + F ++ E GIAKGIRRI AVT   A +    A      +D A K+       
Sbjct: 734 VAKTGDIKDFVIIEESGIAKGIRRIVAVTGHEAQEVQRIAREFSASLDSADKLSFGPEKE 793

Query: 824 ---------------SLLEKNQVR----KAQKKVAEENLQKAVKVATETAEAA------- 857
                          S+L+K ++     K  K + +    K  + + +T EA        
Sbjct: 794 QRAKELGVALKQLSISVLDKQKLNEKFTKLDKSIKDHLKAKQKEESKKTLEAVNGWLKDE 853

Query: 858 ASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQ 917
             +   F ++ V +  +A A+ EA+  + +Q     +   T  +   A  C    E    
Sbjct: 854 EKSKTAFFVAHVPISANAKAITEAINLIKKQHKDKSLYLLTGTSEKVAHGCYISDEAI-- 911

Query: 918 SKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           SK ++ SE   A    + G+ G GKG +  G G     +  A++   +  A KL
Sbjct: 912 SKGIDASELAKAVSAHIGGKAG-GKGNVVQGMGDSPEGIDAAVETVTKLLAEKL 964


>gi|148679537|gb|EDL11484.1| alanyl-tRNA synthetase, isoform CRA_a [Mus musculus]
          Length = 1055

 Score =  874 bits (2259), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 471/967 (48%), Positives = 612/967 (63%), Gaps = 65/967 (6%)

Query: 60   ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
            A ++R+ F  FF    H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  ++KL
Sbjct: 94   AREIRERFINFFRRNEHTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKL 153

Query: 120  TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            +RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A + A ELLT+ +
Sbjct: 154  SRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQEF 213

Query: 180  RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
             +P +RLY TYFGGDE AGL PD E R IW    L  +R+LP   KDNFWEMGDTGPCGP
Sbjct: 214  GIPVERLYVTYFGGDEAAGLEPDLECRQIWQNLGLDEARILPGNMKDNFWEMGDTGPCGP 273

Query: 239  CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
            CSEIHYDR G RDAA LVN DDP  +EIWN+VFIQ+NRESDG LKPLP K +DTG+G ER
Sbjct: 274  CSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNRESDGVLKPLPKKSIDTGMGLER 333

Query: 299  LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
            L S+LQNKMSNYDTD+FMP F+AIQ+ TGARPY+GKVGA+DAD +DMAYRV+ADH RT++
Sbjct: 334  LVSVLQNKMSNYDTDLFMPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADHARTIT 393

Query: 359  FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
             A+ADG  P N GR YVLRRILRRAVRY  E L A  GFF  LV++VV+ +GD FPELK+
Sbjct: 394  VALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRGFFATLVDVVVQSLGDAFPELKK 453

Query: 419  REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
                +++II  EE  F KTL +G     +  Q +   K + G  A++L+DTYGFP+DLT 
Sbjct: 454  DPEMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDCKTIPGDTAWLLYDTYGFPVDLTG 513

Query: 478  LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
            L+AEE+GL+VD+ GF    +E R     +Q K AG    I++D  A   L  +G+ ATDD
Sbjct: 514  LIAEEKGLVVDMNGFE---EERRLAQLKSQGKGAGDEDLIMLDIYAIEELRAKGLEATDD 570

Query: 536  SFKFIWFQDHK---------SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
            S K+ +  D           + + A+     F++ VV G E G+VL  + FYAEQGGQI+
Sbjct: 571  SPKYNYQSDSSGSYVFECTVATVLALRREKMFVDEVVTGQECGVVLDKTCFYAEQGGQIY 630

Query: 587  DEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
            DEG++  +  S      F V+N Q+ GG+V+HIG++    G   VG++V   +D  RR+ 
Sbjct: 631  DEGYLVKVDDSSEDKTEFTVKNAQVRGGYVLHIGTIY---GNLKVGDQVRLFIDEPRRRP 687

Query: 641  IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
            +  NHT TH+LNFALR VLG+  DQKGS+V P++LRFDF+    +  + +++ E IVN  
Sbjct: 688  VMSNHTATHILNFALRSVLGE-ADQKGSLVAPDRLRFDFTAKGAMSTQQIKKAEEIVNGM 746

Query: 701  IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
            I+A   V++++  LA AK I GLRAVF E YPDPVRVV+IG  V +LL DP        S
Sbjct: 747  IEAAKPVYTQDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPCGPAGSLTS 806

Query: 761  AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEK------- 813
             E CGGTHL N+  A AF +++EE IAKGIRRI AVT   A KA   + +L+K       
Sbjct: 807  VEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKSETLKKSLSAMEA 866

Query: 814  --------------EVDDASKIEGSLL-------EKNQVRKAQKKVAEENLQKAVK---- 848
                          E+ D  +   + +       E+ +  K+ KKV  ++L +A K    
Sbjct: 867  KVKAQTAPNKDVQREIADLGEALATAVIPQWQKDEQRETLKSLKKVM-DDLDRASKADVQ 925

Query: 849  --VATETAEAAASN-GKPFCISRVEVGLDAAAVREAV-LKVIEQKGMPVMVFSTDETTNK 904
              V  +T +   SN  +P  I  +E G  A A+ EA+ L          M+F+ D    K
Sbjct: 926  KRVLEKTKQLIDSNPNQPLVILEMESGASAKALNEALKLFKTHSPQTSAMLFTVDNEAGK 985

Query: 905  AVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAA 964
                  VP+ +  ++ L+ SEW+      + G+ G GK   A   G +   +  A+ LA 
Sbjct: 986  ITCLCQVPQNA-ANRGLKASEWVQQVSGLMDGK-GGGKDMSAQATGKNVGCLQEALQLAT 1043

Query: 965  EFAAMKL 971
             FA ++L
Sbjct: 1044 SFAQLRL 1050


>gi|383410179|gb|AFH28303.1| alanyl-tRNA synthetase, cytoplasmic [Macaca mulatta]
          Length = 968

 Score =  874 bits (2259), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 469/967 (48%), Positives = 618/967 (63%), Gaps = 65/967 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A+++R  F  FF+   H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  ++KL
Sbjct: 7   ASEIRQRFIDFFKRNEHTYIHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A + A ELLT+ +
Sbjct: 67  SRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +P  RLY TYFGGDE AGL PD E + IW    L  +++LP   KDNFWEMGDTGPCGP
Sbjct: 127 GIPIGRLYVTYFGGDEAAGLEPDLECKQIWQNLGLDDTKILPGNMKDNFWEMGDTGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G RDAA LVN DDP  +EIWN+VFIQ+NRE+DG LKPLP K +DTG+G ER
Sbjct: 187 CSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNREADGILKPLPKKSIDTGMGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+F+P F+AIQ+ TGARPY+GKVGA+DAD +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY  E L A  GFF  LV++VV+ +GD FPELK+
Sbjct: 307 VALADGGRPDNTGRGYVLRRILRRAVRYAHEKLNASRGFFATLVDVVVQSLGDAFPELKK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
               +++I+  EE  F KTL +G     +  Q +   K + G  A++L+DTYGFP+DLT 
Sbjct: 367 DPDMVKDIVNEEEVQFLKTLSRGRRILDRKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTG 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
           L+AEE+GL+VD++GF      A+ +S   Q K AGG   I++D  A   L  RG+  TDD
Sbjct: 427 LIAEEKGLVVDMDGFEEERKLAQLKS---QGKGAGGEDLIMLDIYAIEELRARGLEVTDD 483

Query: 536 SFKFIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           S K+ +         F++  + + A+     F+E V  G E G+VL  + FYAEQGGQI+
Sbjct: 484 SPKYNYHLDFSGSYVFENTVATVMALRREKMFVEEVSTGQECGVVLDKTCFYAEQGGQIY 543

Query: 587 DEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           DEG++  +  S      F V+N Q+ GG+V+HIG++    G   VG++V   +D  RR+ 
Sbjct: 544 DEGYLVKVDDSSEDKTEFTVKNAQVRGGYVLHIGTIY---GDLKVGDQVRLFIDEPRRRP 600

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           I  NHT TH+LNFALR VLG+  DQKGS+V P++LRFDF+    +  + +++ E I NE 
Sbjct: 601 IMSNHTATHILNFALRSVLGE-ADQKGSLVAPDRLRFDFTAKGAMSTQQIKKAEEIANEM 659

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I+A   V++++  LA AK I GLRAVF E YPDPVRVV+IG  V +LL DP        S
Sbjct: 660 IEAAKPVYTQDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTS 719

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEK------- 813
            E CGGTHL N+  A AF +++EE IAKGIRRI AVT   A KA   A SL+K       
Sbjct: 720 VEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKAESLKKSLSVMEA 779

Query: 814 --------------EVDDASKIEGSLL----EKNQVRKAQKKVAE--ENLQKAVK----- 848
                         E+ D  +   + +    +K+++R+  K + +  ++L +A K     
Sbjct: 780 KVKAQTAPNKDVQREIADLGEALATAVIPQWQKDELRETLKSLKKVMDDLDRASKADVQK 839

Query: 849 -VATETAEAAASN-GKPFCISRVEVGLDAAAVREAVLKVIEQKG--MPVMVFSTDETTNK 904
            V  +T +   SN  +P  I  +E G  A A+ EA LK+ +        M+F+ D    K
Sbjct: 840 RVLEKTKQLIDSNPNQPLVILEMESGASAKALNEA-LKLFKTHSPQTSAMLFTVDNEAGK 898

Query: 905 AVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAA 964
                 VP+ +  ++ L+ SEW+      + G+ G GK   A   G +   +  A+ LA 
Sbjct: 899 ITCLCQVPQNA-ANRGLKASEWVQQVSGLMDGK-GGGKDVSAQATGKNIGCLQEALQLAT 956

Query: 965 EFAAMKL 971
            FA ++L
Sbjct: 957 SFAQLRL 963


>gi|443730742|gb|ELU16117.1| hypothetical protein CAPTEDRAFT_155717 [Capitella teleta]
          Length = 1188

 Score =  874 bits (2259), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 466/969 (48%), Positives = 615/969 (63%), Gaps = 65/969 (6%)

Query: 60  ATKVRDTFFKFF-EDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSK 118
             ++R  F  FF E K H  W SS  +P++DPTLLFANAGMNQ+KPIF G  DPN+++ +
Sbjct: 7   GNQLRQMFVDFFVEKKQHKYWHSSSTIPLDDPTLLFANAGMNQFKPIFQGCVDPNSEMGR 66

Query: 119 LTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKV 178
           L R  N+QKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFGDYFK E IEWAWELLT+V
Sbjct: 67  LVRVVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKETIEWAWELLTEV 126

Query: 179 YRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCG 237
           Y+LP DR+Y +YFGG  + GL PDNEARDIWL   LP  RV+PFG  DNFW+MGDTGPCG
Sbjct: 127 YKLPKDRMYVSYFGGVPEKGLEPDNEARDIWLNLGLPPERVMPFGMADNFWQMGDTGPCG 186

Query: 238 PCSEIHYDRTGN-RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGF 296
           PCSEIH+DR G  RDAA LVN DDP  +EIWN+VF Q+N E+DG+LK LP K++D G+G 
Sbjct: 187 PCSEIHFDRIGGGRDAAHLVNEDDPDVLEIWNLVFTQYNMENDGTLKGLPKKNIDCGMGL 246

Query: 297 ERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRT 356
           ERLTS++Q K SNYDTD+F PIFDAIQ+ATG R Y+GKVGADD+D +DMAYRV+ADH RT
Sbjct: 247 ERLTSVIQGKPSNYDTDLFKPIFDAIQKATGCRDYTGKVGADDSDGIDMAYRVLADHART 306

Query: 357 LSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPEL 416
           L+ A+ADG  P N GR YVLRRILRRAVRY +E L A+ G    LV+ VV ++GD FPE+
Sbjct: 307 LTIALADGGRPDNTGRGYVLRRILRRAVRYANEKLNAKPGVIASLVDTVVDILGDAFPEV 366

Query: 417 KQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG--KVLSGQDAFILWDTYGFPLD 474
           ++    +++II  EE  F KTL +G    ++    +    K+L G  A+ L+DTYGFPLD
Sbjct: 367 RKDPDMVKDIINEEEQQFLKTLTRGRRLLERTINKLGSGCKMLPGDVAWRLYDTYGFPLD 426

Query: 475 LTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATD 534
           LTQLM EE+ + VD+ G+      A+ +S+  ++ +    I +D  A + L K+G+  TD
Sbjct: 427 LTQLMVEEKNMTVDLAGYEECKKAAQIKSQ-GKSGEVDEQINLDVHAISDLQKQGLPPTD 485

Query: 535 DSFKFIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
           +S K+I+         F    + +KA+ +   F++ V  G EVG+VL  + FYA QGGQ+
Sbjct: 486 ESPKYIYSATVDGEYDFNMCNATVKALRSNKTFVDQVTSGQEVGVVLDKTCFYATQGGQM 545

Query: 586 FDEGFI---EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIA 642
           FDEGFI   +       V +VQ+ GG+V+H+G +    G  SVG+ V  +VD +RR+ I 
Sbjct: 546 FDEGFIVKVDDEDTELKVHDVQVRGGYVLHVGVV---EGTLSVGDNVRLQVDVERRRPIM 602

Query: 643 PNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIK 702
            NHT THMLNFALR+VLG   DQKGS+V P+KLRFDF+    +  + ++  E IVN+   
Sbjct: 603 CNHTGTHMLNFALRQVLG-SADQKGSLVAPDKLRFDFTAKGAMTAKQVKDTEDIVNQVAA 661

Query: 703 AELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAE 762
              +VF+K + LA AK I GLRAVF E YPDPVRVV++G  VEDLL+DP+       S E
Sbjct: 662 KNEEVFTKVSDLAPAKAIQGLRAVFDETYPDPVRVVSLGISVEDLLSDPDGPAGSLTSVE 721

Query: 763 LCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV------- 815
            CGGTHL+ T      A+++EE IAKGIRRI AVT   A KA   A  LEKE+       
Sbjct: 722 FCGGTHLTRTGHIGHMAIIAEEAIAKGIRRIVAVTGHEAQKAVHRADVLEKEIQDLKNRM 781

Query: 816 ----------------------DDASKIEGSLLEKNQVRKAQKKVAE--ENLQKAVKVA- 850
                                 D+ S+ +     ++++R   K + +  +N+ KA K A 
Sbjct: 782 DQATSSKNFSQSELNKEIVNLTDEVSQSQTPYWRRDELRNRLKPLKKTLDNMDKARKAAV 841

Query: 851 -TETAEAAASN-----GKPFCISRVEVGLDAAAVREAV--LKVIEQKGMPVMVFSTDETT 902
            TE  + A         +PF +   + G +A A+  A+   K +  K       S D   
Sbjct: 842 LTEVVDEAKKQVVENPNQPFVVCEFKAGSNAKALDGAMKQYKALSPK-TACFFISVDNEN 900

Query: 903 NKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDL 962
            K +  + VP++  ++  L+ +EW+  ++Q L    G GK   A   GT+ A +  A+ +
Sbjct: 901 GKIMAMSCVPQEVTKTG-LKANEWI-GSVQTLMQARGGGKELSAQATGTNTACLQEALGI 958

Query: 963 AAEFAAMKL 971
           A ++A  KL
Sbjct: 959 ATKYAQTKL 967


>gi|350409807|ref|XP_003488850.1| PREDICTED: alanyl-tRNA synthetase, cytoplasmic-like [Bombus
           impatiens]
          Length = 1194

 Score =  874 bits (2259), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 464/969 (47%), Positives = 608/969 (62%), Gaps = 65/969 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R  +  FF+ KNH    SS  +P +DPTLLF NAGMNQ+KPIFLGT DPN+ ++KL
Sbjct: 7   AKQIRQAYIDFFKSKNHEYVHSSSTIPHDDPTLLFTNAGMNQFKPIFLGTVDPNSDMAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            RA N+QKCIRAGGKHNDLDDVGKD YHHTFFEM+GNWSFGDYFK E   WAWE LT   
Sbjct: 67  MRAVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMMGNWSFGDYFKKEICTWAWEFLTVKL 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
           +L ADRLY TYFGGDEK  L  D E + IWL   +  S VLP   KDNFWEMG+TGPCGP
Sbjct: 127 KLSADRLYVTYFGGDEKNNLKSDEECKQIWLSLGVSPSHVLPGNMKDNFWEMGETGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR GNR+AA LVN DDP  +EIWN+VFIQFNRE+DGSLK LP +H+D GLG ER
Sbjct: 187 CSEIHYDRIGNREAADLVNQDDPDVLEIWNLVFIQFNRETDGSLKLLPKRHIDCGLGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S++QNK +NYDTD+F+P+FDAIQ+ TGA PY G+VG +D D +DMAYRV+ADH RT++
Sbjct: 247 LVSVIQNKRANYDTDLFVPLFDAIQEGTGAPPYRGRVGMEDEDGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY +E L A+ GFF  LVN+VV ++GD+FPE+K+
Sbjct: 307 IALADGGVPDNTGRGYVLRRILRRAVRYATEKLNAKPGFFGSLVNVVVNILGDIFPEVKK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
              +I ++I  EE  F KTL +G     +    +    VL G  A+ L+DTYGFP+DLTQ
Sbjct: 367 DPQYIIDVINEEEIQFLKTLSRGRNLLNRTIAKLGSSNVLPGDVAWRLYDTYGFPVDLTQ 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA---IVMDADATAALHKRGVLATD 534
           LMAEE+GL VDI G+    +EA+++++     ++GG    I +D  A   L  +G+  T+
Sbjct: 427 LMAEEKGLKVDIIGY----EEAKKQAQLISQSKSGGVDDQINLDVHAITELQNKGIKPTN 482

Query: 535 DSFKFIW-------FQDHKSV-----IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQG 582
           D  K+ +       +++++ V     + A+     F++ V  G EVGI+L  ++FYAEQG
Sbjct: 483 DLPKYNYKVVNNKLYEEYEFVPCTGTVIAVRRAKTFVDEVSSGEEVGILLDQTNFYAEQG 542

Query: 583 GQIFDEGF---IEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRK 639
           GQI+DEGF   I+       ++NVQI GG+V+HIG++  G G+   G++V   +D  RR+
Sbjct: 543 GQIYDEGFLVKIDDDDTEVRIKNVQIRGGYVLHIGTV--GQGKLKKGDKVFLNIDTTRRR 600

Query: 640 LIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNE 699
           LI  NHT TH LN ALR+VLG  VDQKGS+V P++LRFDF++   +  E +R++E I + 
Sbjct: 601 LIMSNHTATHALNHALRKVLGTEVDQKGSLVAPDRLRFDFTNKGAMTAEQVRKVEEITSN 660

Query: 700 QIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSI 759
            IK    +++KE+ LA AK I GLRA+F E YPDPVRVV+IG  VEDL  DP +   L  
Sbjct: 661 MIKGNKKIYAKESNLALAKTIQGLRAMFEETYPDPVRVVSIGIPVEDLEKDPLSSAALQT 720

Query: 760 SAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLE------- 812
           S E CGGTHL  T     F + SEE IAKGIRRI A+T   A KA + A  L+       
Sbjct: 721 SVEFCGGTHLHYTEHIGDFVIASEEAIAKGIRRIVALTGPEATKAQKKASILQNHLDQLQ 780

Query: 813 ----------------KEV----DDASKIEGSLLEKNQVRKAQKKV--AEENLQKAVKVA 850
                           KE+    DD S    S  +K+++RK  K +  A ++ ++  K+A
Sbjct: 781 ATIVADKDGVNIKEHIKEIVELTDDVSHATISSWKKDKMRKMLKDLRKALDDKERVAKIA 840

Query: 851 TETA------EAAASNGKPFCISRVEVGLDAAAVREAVLKVIE--QKGMPVMVFSTDETT 902
              A      E    N     +  V          ++ LK I+        ++ S D   
Sbjct: 841 IVNAVVDTIQEIIQQNIGCLVLVEVLQAYSNTKALDSALKKIKAISPETSALLISVDPDA 900

Query: 903 NKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDL 962
            K    + V  KS  +K L+ +EW+      ++G+ G GK   A   GT+ + VT  +  
Sbjct: 901 KKIFALSTV-SKSAINKGLKANEWIQEIASLMEGK-GGGKSESAQASGTNISCVTKLVHT 958

Query: 963 AAEFAAMKL 971
           A  FA  KL
Sbjct: 959 AKNFANSKL 967


>gi|45188236|ref|NP_984459.1| ADR363Cp [Ashbya gossypii ATCC 10895]
 gi|44983080|gb|AAS52283.1| ADR363Cp [Ashbya gossypii ATCC 10895]
 gi|374107673|gb|AEY96581.1| FADR363Cp [Ashbya gossypii FDAG1]
          Length = 956

 Score =  874 bits (2258), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 443/861 (51%), Positives = 571/861 (66%), Gaps = 39/861 (4%)

Query: 58  WPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLS 117
           W A  VR TF  +F+ K+H    SSPV+P +DPTLLFANAGMNQ+KPIFLG  DP +   
Sbjct: 9   WTAQNVRSTFIDYFKAKDHKLVPSSPVIPYDDPTLLFANAGMNQFKPIFLGMVDPASDFY 68

Query: 118 KLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTK 177
            L RA NTQKCIRAGGKHNDL+DVG D+YHHTFFEMLGNWSFGDYFK EAI ++WELLTK
Sbjct: 69  TLKRAVNTQKCIRAGGKHNDLEDVGLDSYHHTFFEMLGNWSFGDYFKKEAIAYSWELLTK 128

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPC 236
           VY LP DRLY TYF GDE  GLA D EARD+WL   +    V+    KDNFWEMGD GPC
Sbjct: 129 VYGLPEDRLYVTYFEGDESLGLAADEEARDLWLSVGVAPDHVIAANVKDNFWEMGDQGPC 188

Query: 237 GPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGF 296
           GPCSE+H+DR G R+AA+LVN DDP  IEIWN VFIQFNRE DGSL+PLPAKHVDTG+GF
Sbjct: 189 GPCSEVHFDRIGGRNAAALVNQDDPNVIEIWNNVFIQFNREHDGSLRPLPAKHVDTGMGF 248

Query: 297 ERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRT 356
           ERL S+LQ+  SNYDTDVF P+F  IQ+ TG RPYSGK GADD D +D AYRV+ADH+RT
Sbjct: 249 ERLVSVLQDVPSNYDTDVFQPLFARIQEITGVRPYSGKFGADDKDGIDTAYRVLADHVRT 308

Query: 357 LSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFPE 415
           L+ A+ADG  P N+GR YVLRRILRR  RY  + +    G FF+ L   +++   DV+PE
Sbjct: 309 LTIALADGGVPDNDGRGYVLRRILRRGARYVRKYMNYPTGKFFSQLAPTLIEQFKDVYPE 368

Query: 416 LKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTYGFP 472
           L + ++++ +I+  EEASF KTL +G    EK+ + A++   K+L G+  + L+DTYGFP
Sbjct: 369 LTKNQSYLFDILDEEEASFAKTLDRGEKLFEKYAETAKNSGSKILDGKQVWRLYDTYGFP 428

Query: 473 LDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLA 532
           +DLTQLMA+E GL VD EGF  A  E+ E S+   +K     I ++    + L   GV  
Sbjct: 429 VDLTQLMADEHGLKVDNEGFEQAKQESYEASKKNGSKGDANLIKLNVHEVSQLSDEGVPR 488

Query: 533 TDDSFKFIWFQDHKSVIKAIYTGSEFIESVVP-GNEVGIVLASSSFYAEQGGQIFDEG-F 590
           TDDS K+   QD ++ I  I+ G  F+E +   G + GI+L  + FYAEQGGQ +D+G  
Sbjct: 489 TDDSAKY-GTQDIEATILRIHDGENFVEQMTEVGKQYGILLDRTCFYAEQGGQEYDKGKL 547

Query: 591 IEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHM 650
           +      F V NVQ Y G+V H G+L +  G+  VG+++I   D  RR  I  NHT TH+
Sbjct: 548 VIDDAAEFNVDNVQQYSGYVFHTGNLAD--GKLCVGDKIIASYDELRRYPIRNNHTGTHL 605

Query: 651 LNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSK 710
           LN ALR +LGD++DQ+GS+V PEKLRFDFSH KP+  E L ++E+I N+QI+    V+ K
Sbjct: 606 LNHALRTILGDNIDQRGSLVTPEKLRFDFSHKKPMSYEELEQVETICNQQIRENRSVYYK 665

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
           +  L  AK I+ +RAVFGE YPDPVRVV++G+ V+++L  P N+EW   S ELCGGTH+S
Sbjct: 666 DIPLDVAKSIHSIRAVFGETYPDPVRVVSVGKSVDEILESPSNEEWAKYSIELCGGTHVS 725

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKNQ 830
            T + + F ++ E GIAKGIRRI AV+   AY+    A     E+D   K+  S++++ +
Sbjct: 726 KTGDIKEFVIIEESGIAKGIRRIVAVSASEAYEVQRVAREFALELDAIDKLPFSMIKEKK 785

Query: 831 VR------------------------KAQKKVAEENLQKAVKVATETAEA-----AASNG 861
           +R                        K +K V +E   KA K   +T +A     AA+  
Sbjct: 786 IREIGVRLDQLNISVITKNELKTKFTKMEKAVKDEVKTKAKKEMKQTLDAVKEYFAANED 845

Query: 862 KPFCISRVEVGLDAAAVREAV 882
             F +  +++  +  AV EAV
Sbjct: 846 ATFFVKSLDISANPKAVTEAV 866


>gi|109148542|ref|NP_001596.2| alanine--tRNA ligase, cytoplasmic [Homo sapiens]
 gi|115502460|sp|P49588.2|SYAC_HUMAN RecName: Full=Alanine--tRNA ligase, cytoplasmic; AltName:
           Full=Alanyl-tRNA synthetase; Short=AlaRS; AltName:
           Full=Renal carcinoma antigen NY-REN-42
 gi|15079238|gb|AAH11451.1| Alanyl-tRNA synthetase [Homo sapiens]
 gi|119572224|gb|EAW51839.1| alanyl-tRNA synthetase, isoform CRA_b [Homo sapiens]
 gi|123981462|gb|ABM82560.1| alanyl-tRNA synthetase [synthetic construct]
 gi|123996297|gb|ABM85750.1| alanyl-tRNA synthetase [synthetic construct]
          Length = 968

 Score =  874 bits (2258), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 468/966 (48%), Positives = 617/966 (63%), Gaps = 63/966 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A+++R  F  FF+   H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  ++KL
Sbjct: 7   ASEIRQRFIDFFKRNEHTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A + A ELLT+ +
Sbjct: 67  SRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +P +RLY TYFGGDE AGL  D E + IW    L  +++LP   KDNFWEMGDTGPCGP
Sbjct: 127 GIPIERLYVTYFGGDEAAGLEADLECKQIWQNLGLDDTKILPGNMKDNFWEMGDTGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G RDAA LVN DDP  +EIWN+VFIQ+NRE+DG LKPLP K +DTG+G ER
Sbjct: 187 CSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNREADGILKPLPKKSIDTGMGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+F+P F+AIQ+ TGARPY+GKVGA+DAD +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY  E L A  GFF  LV++VV+ +GD FPELK+
Sbjct: 307 VALADGGRPDNTGRGYVLRRILRRAVRYAHEKLNASRGFFATLVDVVVQSLGDAFPELKK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
               +++II  EE  F KTL +G     +  Q +   K + G  A++L+DTYGFP+DLT 
Sbjct: 367 DPDMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTG 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
           L+AEE+GL+VD++GF      A+ +S   Q K AGG   I++D  A   L  RG+  TDD
Sbjct: 427 LIAEEKGLVVDMDGFEEERKLAQLKS---QGKGAGGEDLIMLDIYAIEELRARGLEVTDD 483

Query: 536 SFKFIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           S K+ +         F++  + + A+     F+E V  G E G+VL  + FYAEQGGQI+
Sbjct: 484 SPKYNYHLDSSGSYVFENTVATVMALRREKMFVEEVSTGQECGVVLDKTCFYAEQGGQIY 543

Query: 587 DEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           DEG++  +  S      F V+N Q+ GG+V+HIG++    G   VG++V   +D  RR+ 
Sbjct: 544 DEGYLVKVDDSSEDKTEFTVKNAQVRGGYVLHIGTIY---GDLKVGDQVWLFIDEPRRRP 600

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           I  NHT TH+LNFALR VLG+  DQKGS+V P++LRFDF+    +  + +++ E I NE 
Sbjct: 601 IMSNHTATHILNFALRSVLGE-ADQKGSLVAPDRLRFDFTAKGAMSTQQIKKAEEIANEM 659

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I+A   V++++  LA AK I GLRAVF E YPDPVRVV+IG  V +LL DP        S
Sbjct: 660 IEAAKAVYTQDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTS 719

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEK------- 813
            E CGGTHL N+  A AF +++EE IAKGIRRI AVT   A KA   A SL+K       
Sbjct: 720 VEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKAESLKKCLSVMEA 779

Query: 814 --------------EVDDASKIEGSLL----EKNQVRKAQKKVAE--ENLQKAVK----- 848
                         E+ D  +   + +    +K+++R+  K + +  ++L +A K     
Sbjct: 780 KVKAQTAPNKDVQREIADLGEALATAVIPQWQKDELRETLKSLKKVMDDLDRASKADVQK 839

Query: 849 -VATETAEAAASN-GKPFCISRVEVGLDAAAVREAV-LKVIEQKGMPVMVFSTDETTNKA 905
            V  +T +   SN  +P  I  +E G  A A+ EA+ L  +       M+F+ D    K 
Sbjct: 840 RVLEKTKQFIDSNPNQPLVILEMESGASAKALNEALKLFKMHSPQTSAMLFTVDNEAGKI 899

Query: 906 VVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAE 965
                VP+ +  ++ L+ SEW+      + G+ G GK   A   G +   +  A+ LA  
Sbjct: 900 TCLCQVPQNA-ANRGLKASEWVQQVSGLMDGK-GGGKDVSAQATGKNVGCLQEALQLATS 957

Query: 966 FAAMKL 971
           FA ++L
Sbjct: 958 FAQLRL 963


>gi|410983936|ref|XP_003998291.1| PREDICTED: LOW QUALITY PROTEIN: alanine--tRNA ligase, cytoplasmic
           [Felis catus]
          Length = 968

 Score =  874 bits (2258), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 472/968 (48%), Positives = 617/968 (63%), Gaps = 67/968 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A+++R  F  FF+   H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  ++KL
Sbjct: 7   ASEIRQRFIDFFKRNEHTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A + A ELLT+ +
Sbjct: 67  SRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +P +RLY TYFGGDE AGL PD E + IW    L  S++LP   KDNFWEMGDTGPCGP
Sbjct: 127 GIPVERLYVTYFGGDEAAGLEPDLECKQIWQNLGLDDSKILPGNMKDNFWEMGDTGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G RDAA LVN DDP  +EIWN+VFIQ+NRE+DG LKPLP K +DTG+G ER
Sbjct: 187 CSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNREADGILKPLPKKSIDTGMGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+F+P F+AIQ+ TGARPY+GKVGADDAD +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGADDADGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY  E L A  GFF  LV++VV+ +GD FPELK+
Sbjct: 307 VALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRGFFATLVDVVVQSLGDAFPELKK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
               +++II  EE  F KTL +G     +  Q +   K + G  A++L+DTYGFP+DLT 
Sbjct: 367 DPDMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDCKTIPGDTAWLLYDTYGFPVDLTG 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
           L+AEE+GL+VD++GF      A+ +S   Q K AG    I++D  A   L ++G+ ATDD
Sbjct: 427 LIAEEKGLVVDMDGFEEERKLAQLKS---QGKGAGAEDLIMLDIYAIEELREKGLEATDD 483

Query: 536 SFKFIWFQDHK---------SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           S K+ +  D           + + A+     F+E V  G E G+VL  + FYAEQGGQI+
Sbjct: 484 SPKYNYHSDSSGSYAFESAVATVMALRRDKMFVEEVSTGQECGVVLDKTCFYAEQGGQIY 543

Query: 587 DEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           DEG++  +  S      F V+N Q+ GG+V+HIG++    G   VG++V   +D  RR+ 
Sbjct: 544 DEGYLVKVEDSSEDKTEFTVKNAQVRGGYVLHIGTIY---GSLRVGDQVRLFIDEPRRRP 600

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           I  NHT TH+LNFALR VLG+  DQ+GS+V P++LRFDF+    +  + ++  E I N  
Sbjct: 601 IMSNHTATHILNFALRSVLGE-ADQRGSLVAPDRLRFDFTAKGAMSTQQIKEAEEIANGM 659

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I+A   V++++  LA AK I GLRAVF E YPDPVRVV+IG  V +LL DP        S
Sbjct: 660 IEAAKPVYTQDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTS 719

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEK------- 813
            E CGGTHL N+  A AF ++SEE IAKGIRRI AVT   A KA   A SL+K       
Sbjct: 720 VEFCGGTHLQNSSHAGAFVIVSEEAIAKGIRRIVAVTGAEAQKALRKAESLKKSLSVMEA 779

Query: 814 --------------EVDDASKIEGSLL----EKNQVR---KAQKKVAEENLQKAVK---- 848
                         E+ D  +   +++    +K++ R   K+ KK+  ++L +A K    
Sbjct: 780 KVKAQTAPNKDVQREIADLGEALATVVIPQWQKDEFRENLKSLKKIM-DDLDRASKADVQ 838

Query: 849 --VATETAEAAASN-GKPFCISRVEVGLDAAAVREAVLKVIEQKG--MPVMVFSTDETTN 903
             V  +T +   SN  +P  I  +E G  A A+ EA LK+ +        M+F+ D    
Sbjct: 839 KRVLEKTKQLIDSNPXQPLVILEMENGASAKALNEA-LKLFKTHSPQTSAMLFTVDNEAG 897

Query: 904 KAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLA 963
           K      VP+ +  ++ L+ SEW+      + G+ G GK   A   G +   +  A+ LA
Sbjct: 898 KITCLCQVPQNA-ANRGLKASEWVQQVSGLMDGK-GGGKDVSAQATGKNVGCLQEALQLA 955

Query: 964 AEFAAMKL 971
             FA ++L
Sbjct: 956 TSFAQLRL 963


>gi|74213943|dbj|BAE29394.1| unnamed protein product [Mus musculus]
          Length = 968

 Score =  874 bits (2258), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 471/968 (48%), Positives = 614/968 (63%), Gaps = 67/968 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R+ F  FF    H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  ++KL
Sbjct: 7   AREIRERFINFFRRNEHTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A + A ELLT+ +
Sbjct: 67  SRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +P +RLY TYFGGDE AGL PD E R IW    L  +R+LP   +DNFWEMGDTGPCGP
Sbjct: 127 GIPVERLYVTYFGGDEAAGLEPDLECRQIWQNLGLDEARILPGNMRDNFWEMGDTGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G RDAA LVN DDP  +EIWN+VFIQ+NRESDG LKPLP K +DTG+G ER
Sbjct: 187 CSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNRESDGVLKPLPKKSIDTGMGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+FMP F+AIQ+ TGARPY+GKVGA+DAD +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFMPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY  E L A  GFF  LV++VV+ +GD FPELK+
Sbjct: 307 VALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRGFFATLVDVVVQSLGDAFPELKK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
               +++II  EE  F KTL +G     +  Q +   K + G  A++L+DTYGFP+DLT 
Sbjct: 367 DPEMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDCKTIPGDTAWLLYDTYGFPVDLTG 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
           L+AEE+GL+VD+ GF    +E R     +Q K AG    I++D  A   L  +G+ ATDD
Sbjct: 427 LIAEEKGLVVDMNGFE---EERRLAQLKSQGKGAGDEDLIMLDIYAIEELRAKGLEATDD 483

Query: 536 SFKFIWFQDHK---------SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           S K+ +  D           + + A+     F++ VV G E G+VL  + FYAEQGGQI+
Sbjct: 484 SPKYNYQSDSSGSYVFECTVATVLALRREKMFVDEVVTGQECGVVLDKTCFYAEQGGQIY 543

Query: 587 DEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           DEG++  +  S      F V+N Q+ GG+V+HIG++    G   VG++V   +D  RR+ 
Sbjct: 544 DEGYLVKVDDSSEDKTEFTVKNAQVRGGYVLHIGTIY---GNLKVGDQVRLFIDEPRRRP 600

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           +  NHT TH+LNFALR VLG+  DQKGS+V P++LRFDF+    +  + +++ E IVN  
Sbjct: 601 VMSNHTATHILNFALRSVLGE-ADQKGSLVAPDRLRFDFTAKGAMSTQQIKKAEEIVNGM 659

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I+A   V++++  LA AK I GLRAVF E YPDPVRVV+IG  V +LL DP        S
Sbjct: 660 IEAAKPVYTQDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPCGPAGSLTS 719

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEK------- 813
            E CGGTHL N+  A AF +++EE IAKGIRRI AVT   A KA   + +L+K       
Sbjct: 720 VEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKSETLKKSLSAMEA 779

Query: 814 --------------EVDDASKIEGSLL-------EKNQVRKAQKKVAEENLQKAVK---- 848
                         E+ D  +   + +       E+ +  K+ KKV  ++L +A K    
Sbjct: 780 KVKAQTAPNKDVQREIADLGEALATAVIPQWQKDEQRETLKSLKKVM-DDLDRASKAGVQ 838

Query: 849 --VATETAEAAASN-GKPFCISRVEVGLDAAAVREAVLKVIEQKG--MPVMVFSTDETTN 903
             V  +T +   SN  +P  I  +E G  A A+ EA LK+ +        M+F+ D    
Sbjct: 839 KRVLEKTKQLIDSNPNQPLVILEMESGASAKALNEA-LKLFKTHSPQTSAMLFTVDNEAG 897

Query: 904 KAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLA 963
           K      VP+ +  ++ L+ SEW+      + G+ G GK   A   G +   +  A+ LA
Sbjct: 898 KITCLCQVPQNA-ANRGLKASEWVQQVSGLMDGK-GGGKDMSAQATGKNVGCLQEALQLA 955

Query: 964 AEFAAMKL 971
             FA ++L
Sbjct: 956 TSFAQLRL 963


>gi|62897207|dbj|BAD96544.1| alanyl-tRNA synthetase variant [Homo sapiens]
          Length = 968

 Score =  874 bits (2258), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 468/966 (48%), Positives = 617/966 (63%), Gaps = 63/966 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A+++R  F  FF+   H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  ++KL
Sbjct: 7   ASEIRQRFIDFFKRNEHTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A + A ELLT+ +
Sbjct: 67  SRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +P +RLY TYFGGDE AGL  D E + IW    L  +++LP   KDNFWEMGDTGPCGP
Sbjct: 127 GIPIERLYVTYFGGDEAAGLEADLECKQIWQNLGLDDTKILPGNMKDNFWEMGDTGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G RDAA LVN DDP  +EIWN+VFIQ+NRE+DG LKPLP K +DTG+G ER
Sbjct: 187 CSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNREADGILKPLPKKSIDTGMGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+F+P F+AIQ+ TGARPY+GKVGA+DAD +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY  E L A  GFF  LV++VV+ +GD FPELK+
Sbjct: 307 VALADGGRPDNTGRGYVLRRILRRAVRYAHEKLNASRGFFATLVDVVVQSLGDAFPELKK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
               +++II  EE  F KTL +G     +  Q +   K + G  A++L+DTYGFP+DLT 
Sbjct: 367 DPDMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTG 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
           L+AEE+GL+VD++GF      A+ +S   Q K AGG   I++D  A   L  RG+  TDD
Sbjct: 427 LIAEEKGLVVDMDGFEEERKLAQLKS---QGKGAGGEDLIMLDIYAIEELRARGLEVTDD 483

Query: 536 SFKFIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           S K+ +         F++  + + A+     F+E V  G E G+VL  + FYAEQGGQI+
Sbjct: 484 SPKYNYHLDSSGSYVFENTVATVMALRREKMFVEEVSTGQECGVVLDKTCFYAEQGGQIY 543

Query: 587 DEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           DEG++  +  S      F V+N Q+ GG+V+HIG++    G   VG++V   +D  RR+ 
Sbjct: 544 DEGYLVKVDDSSEDKTEFTVKNAQVRGGYVLHIGTIY---GDLKVGDQVWLFIDEPRRRP 600

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           I  NHT TH+LNFALR VLG+  DQKGS+V P++LRFDF+    +  + +++ E I NE 
Sbjct: 601 IMSNHTATHILNFALRSVLGE-ADQKGSLVAPDRLRFDFTAKGAMSTQQIKKAEEIANEM 659

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I+A   V++++  LA AK I GLRAVF E YPDPVRVV+IG  V +LL DP        S
Sbjct: 660 IEAAKAVYTQDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTS 719

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEK------- 813
            E CGGTHL N+  A AF +++EE IAKGIRRI AVT   A KA   A SL+K       
Sbjct: 720 VEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKAESLKKCLSVMEA 779

Query: 814 --------------EVDDASKIEGSLL----EKNQVRKAQKKVAE--ENLQKAVK----- 848
                         E+ D  +   + +    +K+++R+  K + +  ++L +A K     
Sbjct: 780 KVKAQTAPNKDVQREIADLGEALATAVIPQWQKDELRETLKSLKKVMDDLDRASKADVQK 839

Query: 849 -VATETAEAAASN-GKPFCISRVEVGLDAAAVREAV-LKVIEQKGMPVMVFSTDETTNKA 905
            V  +T +   SN  +P  I  +E G  A A+ EA+ L  +       M+F+ D    K 
Sbjct: 840 RVLEKTKQFIDSNPNQPLVILEMESGATAKALNEALKLFKMHSPQTSAMLFTVDNEAGKI 899

Query: 906 VVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAE 965
                VP+ +  ++ L+ SEW+      + G+ G GK   A   G +   +  A+ LA  
Sbjct: 900 TCLCQVPQNA-ANRGLKASEWVQQVSGLMDGK-GGGKDVSAQATGKNVGCLQEALQLATS 957

Query: 966 FAAMKL 971
           FA ++L
Sbjct: 958 FAQLRL 963


>gi|150864558|ref|XP_001383420.2| Alanyl-tRNA synthetase, cytoplasmic (Alanine--tRNA ligase) (AlaRS)
           [Scheffersomyces stipitis CBS 6054]
 gi|149385814|gb|ABN65391.2| Alanyl-tRNA synthetase, cytoplasmic (Alanine--tRNA ligase) (AlaRS)
           [Scheffersomyces stipitis CBS 6054]
          Length = 954

 Score =  874 bits (2257), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 437/773 (56%), Positives = 550/773 (71%), Gaps = 14/773 (1%)

Query: 57  EWPATKVRDTFFKFFEDK-NHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQ 115
           EW A+KVR TF  +F +K +H    SS VVP NDPTLLFANAGMNQYKPIFLGTADP + 
Sbjct: 8   EWTASKVRSTFLDYFTNKRDHKFVPSSSVVPHNDPTLLFANAGMNQYKPIFLGTADPASD 67

Query: 116 LSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELL 175
           L+ L RA N+QKCIRAGGKHNDL+DVG+D+YHHTFFEMLGNWSFGDYFK EAI WAWELL
Sbjct: 68  LASLKRAANSQKCIRAGGKHNDLEDVGRDSYHHTFFEMLGNWSFGDYFKPEAITWAWELL 127

Query: 176 TKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTG 234
           T+VY L  DRLY TYF GD K GL PD EA+  WLK  +    +LP   KDNFWEMGD G
Sbjct: 128 TEVYGLDKDRLYVTYFEGDAKQGLEPDLEAKSFWLKVGVAEDHILPGNAKDNFWEMGDQG 187

Query: 235 PCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           PCGPCSEIHYDR G R+AASLVN DDP  +E+WNIVFIQ+NRE+D SLK LPAKH+DTG+
Sbjct: 188 PCGPCSEIHYDRIGGRNAASLVNQDDPNVLEVWNIVFIQYNREADSSLKTLPAKHIDTGM 247

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL S+LQ+K SNYDTDVF+PIFD I+  TG RPY GK GA+D D +D AYRV+ADH+
Sbjct: 248 GFERLVSVLQDKSSNYDTDVFLPIFDKIRDITGIRPYGGKFGAEDTDGIDTAYRVIADHV 307

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVF 413
           RTL+FAI DG  P N+G  YVLRRILRR  RY  + +    G FF  LV++V++   ++F
Sbjct: 308 RTLTFAICDGGVPNNDGAGYVLRRILRRGSRYVRKYMNYPIGSFFQQLVDVVIEQNKEIF 367

Query: 414 PELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTYG 470
           PE+      ++EI+  EE SF KTL +G    E++   A     + LSG+D + L+DTYG
Sbjct: 368 PEIVHGAQDLKEILNEEELSFAKTLDRGEKLFEQYAIIASKTPEQTLSGKDVWRLYDTYG 427

Query: 471 FPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRG- 529
           FP DLT+LMAEE GL +D   F  A  E++E S++  NK     + +D  + + L     
Sbjct: 428 FPSDLTRLMAEEAGLKIDEPAFEKARLESKEASKAIGNKDGVELVKLDVHSLSELDSNAN 487

Query: 530 VLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGN-EVGIVLASSSFYAEQGGQIFDE 588
           V  TDDS K+   ++ K+ I+AIY+ S F++S+   + + G++L  + FYAEQGGQI+D 
Sbjct: 488 VSKTDDSAKY-GRENIKATIQAIYSSSGFVDSIDDSSVQYGVLLDKTPFYAEQGGQIYDT 546

Query: 589 G--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
           G   I+G    F V NVQ+YGG+V+H G++ EG+   +V ++VI   D  RR  I  NHT
Sbjct: 547 GKLVIDGK-AEFNVTNVQVYGGYVLHTGNIVEGS--LNVKDDVIATYDELRRWPIRNNHT 603

Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD 706
            TH+LN+ALREVLGD VDQ+GS+V PEKLRFDFSH + + P+ L  +ESI NE IK+  +
Sbjct: 604 GTHVLNYALREVLGDSVDQRGSLVAPEKLRFDFSHKQALTPKELAAVESISNEYIKSNKE 663

Query: 707 VFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGG 766
           VF K+ +L EA+ INGLRAVFGE YPDPVRVV+IG  VEDLLA+P+  +W  +S E CGG
Sbjct: 664 VFYKDVSLNEAREINGLRAVFGETYPDPVRVVSIGVPVEDLLAEPKKADWHKVSIEFCGG 723

Query: 767 THLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDAS 819
           TH++ T + +   ++ E GIAKGIRRI AVT   A+   + A   E E+D A+
Sbjct: 724 THVAKTGDIKDLVVIEESGIAKGIRRIVAVTGHDAHAVQKIASEFEAELDHAA 776


>gi|37903407|gb|AAP57355.1| Alanyl-tRNA synthase [Mus musculus]
          Length = 968

 Score =  873 bits (2256), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 471/968 (48%), Positives = 613/968 (63%), Gaps = 67/968 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R+ F  FF    H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  ++KL
Sbjct: 7   AREIRERFINFFRRNEHTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A + A ELLT+ +
Sbjct: 67  SRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +P +RLY TYFGGDE AGL PD E R IW    L  +R+LP   KDNFWEMGDTGPCGP
Sbjct: 127 GIPVERLYVTYFGGDEAAGLEPDLECRQIWQNLGLDEARILPGNMKDNFWEMGDTGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G RDAA LVN DDP  +EIWN+VFIQ+NRESDG LKPLP K +DTG+G ER
Sbjct: 187 CSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNRESDGVLKPLPKKSIDTGMGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+FMP F+AIQ+ TGARPY+GKVGA+DAD +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFMPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY  E L A  GFF  LV++VV+ +GD FPELK+
Sbjct: 307 VALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRGFFATLVDVVVQSLGDAFPELKK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
               +++II  EE  F KTL +G     +  Q +   K + G  A++L+DTYGFP+DLT 
Sbjct: 367 DPEMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDCKTIPGDTAWLLYDTYGFPVDLTG 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
           L+AEE+GL+VD+ GF    +E R     +Q K AG    I++D  A   L  +G+ ATDD
Sbjct: 427 LIAEEKGLVVDMNGFE---EERRLAQLKSQGKGAGDEDLIMLDIYAIEELRAKGLEATDD 483

Query: 536 SFKFIWFQDHK---------SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           S K+ +  D           + + A+     F++ VV G E G+VL  + FYAEQGGQI+
Sbjct: 484 SPKYNYQSDSSGSYVFECTVATVLALRREKMFVDEVVTGQECGVVLDKTCFYAEQGGQIY 543

Query: 587 DEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           DEG++  +  S      F V+N Q+ GG+V+HIG++    G   VG++V   +D  RR+ 
Sbjct: 544 DEGYLVKVDDSSEDKTEFTVKNAQVRGGYVLHIGTIY---GNLKVGDQVRLFIDEPRRRP 600

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           +  NHT TH+LNFALR VLG+  DQKGS+V P++LRFDF+    +  + +++ E IVN  
Sbjct: 601 VMSNHTATHILNFALRSVLGE-ADQKGSLVAPDRLRFDFTAKGAMSTQQIKKAEEIVNGM 659

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I+A   V++++  LA AK I GLRAVF E YPDPVRVV+IG  V +LL DP        S
Sbjct: 660 IEAAKPVYTQDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPCGPAGSLTS 719

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEK------- 813
            E CGGTHL N+    AF +++EE IAKGIRRI AVT   A KA   + +L+K       
Sbjct: 720 VEFCGGTHLRNSSHEGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKSETLKKSLSAMEA 779

Query: 814 --------------EVDDASKIEGSLL-------EKNQVRKAQKKVAEENLQKAVK---- 848
                         E+ D  +   + +       E+ +  K+ KKV  ++L +A K    
Sbjct: 780 KVKAQTAPNKDVQREIADLGEALATAVIPQWQKDEQRETLKSLKKVM-DDLDRASKADVQ 838

Query: 849 --VATETAEAAASN-GKPFCISRVEVGLDAAAVREAVLKVIEQKG--MPVMVFSTDETTN 903
             V  +T +   SN  +P  I  +E G  A A+ EA LK+ +        M+F+ D    
Sbjct: 839 KRVLEKTKQLIDSNPNQPLVILEMESGASAKALNEA-LKLFKTHSPQTSAMLFTVDNEAG 897

Query: 904 KAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLA 963
           K      VP+ +  ++ L+ SEW+      + G+ G GK   A   G +   +  A+ LA
Sbjct: 898 KITCLCQVPQNA-ANRGLKASEWVQQVSGLMDGK-GGGKDMSAQATGKNVGCLQEALQLA 955

Query: 964 AEFAAMKL 971
             FA ++L
Sbjct: 956 TSFAQLRL 963


>gi|74196486|dbj|BAE34378.1| unnamed protein product [Mus musculus]
          Length = 968

 Score =  873 bits (2255), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 471/968 (48%), Positives = 613/968 (63%), Gaps = 67/968 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R+ F  FF    H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  ++KL
Sbjct: 7   AREIRERFINFFRRNEHTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A + A ELLT+ +
Sbjct: 67  SRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +P +RLY TY GGDE AGL PD E R IW    L  +R+LP   KDNFWEMGDTGPCGP
Sbjct: 127 GIPVERLYVTYLGGDEAAGLEPDLECRQIWQNLGLDEARILPGNMKDNFWEMGDTGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G RDAA LVN DDP  +EIWN+VFIQ+NRESDG LKPLP K +DTG+G ER
Sbjct: 187 CSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNRESDGVLKPLPKKSIDTGMGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+FMP F+AIQ+ TGARPY+GKVGA+DAD +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFMPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY  E L A  GFF  LV++VV+ +GD FPELK+
Sbjct: 307 VALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRGFFATLVDVVVQSLGDAFPELKK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
               +++II  EE  F KTL +G     +  Q +   K + G  A++L+DTYGFP+DLT 
Sbjct: 367 DPDMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDCKTIPGDTAWLLYDTYGFPVDLTG 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
           L+AEE+GL+VD+ GF    +E R     +Q K AG    I++D  A   L  +G+ ATDD
Sbjct: 427 LIAEEKGLVVDMNGFE---EERRLAQLKSQGKGAGDEDLIMLDIYAIEELRAKGLEATDD 483

Query: 536 SFKFIWFQDHK---------SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           S K+ +  D           + + A+     F++ VV G E G+VL  + FYAEQGGQI+
Sbjct: 484 SPKYNYQSDSSGSYVFECTVATVLALRREKMFVDEVVTGQECGVVLDKTCFYAEQGGQIY 543

Query: 587 DEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           DEG++  +  S      F V+N Q+ GG+V+HIG++    G   VG++V   +D  RR+ 
Sbjct: 544 DEGYLVKVDDSSEDKTEFTVKNAQVRGGYVLHIGTIY---GNLKVGDQVRLFIDEPRRRP 600

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           +  NHT TH+LNFALR VLG+  DQKGS+V P++LRFDF+    +  + +++ E IVN  
Sbjct: 601 VMSNHTATHILNFALRSVLGE-ADQKGSLVAPDRLRFDFTAKGAMSTQQIKKAEEIVNGM 659

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I+A   V++++  LA AK I GLRAVF E YPDPVRVV+IG  V +LL DP        S
Sbjct: 660 IEAAKPVYTQDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPCGPAGSLTS 719

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEK------- 813
            E CGGTHL N+  A AF +++EE IAKGIRRI AVT   A KA   + +L+K       
Sbjct: 720 VEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKSETLKKSLSAMEA 779

Query: 814 --------------EVDDASKIEGSLL-------EKNQVRKAQKKVAEENLQKAVK---- 848
                         E+ D  +   + +       E+ +  K+ KKV  ++L +A K    
Sbjct: 780 KVKAQTAPNKDVQREIADLGEALATAVIPQWQKDEQRETLKSLKKVM-DDLDRASKADVQ 838

Query: 849 --VATETAEAAASN-GKPFCISRVEVGLDAAAVREAVLKVIEQKG--MPVMVFSTDETTN 903
             V  +T +   SN  +P  I  +E G  A A+ EA LK+ +        M+F+ D    
Sbjct: 839 KRVLEKTKQLIDSNPNQPLVILEMESGASAKALNEA-LKLFKTHSPQTSAMLFTVDNEAG 897

Query: 904 KAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLA 963
           K      VP+ +  ++ L+ SEW+      + G+ G GK   A   G +   +  A+ LA
Sbjct: 898 KITCLCQVPQNA-ANRGLKASEWVQQVSGLMDGK-GGGKDMSAQATGKNVGCLQEALQLA 955

Query: 964 AEFAAMKL 971
             FA ++L
Sbjct: 956 TSFAQLRL 963


>gi|159473717|ref|XP_001694980.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158276359|gb|EDP02132.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 750

 Score =  873 bits (2255), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 440/750 (58%), Positives = 528/750 (70%), Gaps = 24/750 (3%)

Query: 61  TKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLT 120
           ++ R  F +FFE K H  W SS VVP NDPTLLF NAGMNQ+KP+FLGT DPN+ + K+ 
Sbjct: 3   SRTRAAFNEFFETKGHTYWASSSVVPHNDPTLLFTNAGMNQFKPVFLGTVDPNSDMGKMK 62

Query: 121 RACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYR 180
           RACN+QKCIRAGGKHNDLDDVGKD YHHTFFEMLGN + G Y   +A+         +  
Sbjct: 63  RACNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNCACGRYPCTQALLLIAHARLPLAL 122

Query: 181 LPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPCS 240
           LPA+RLYATYF GD   GL  D+EAR+IWL+FLP SRVLP+G K+NFWEMGD GPCGPC+
Sbjct: 123 LPAERLYATYFRGDPAMGLPADDEAREIWLRFLPESRVLPYGNKENFWEMGDQGPCGPCT 182

Query: 241 EIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLT 300
           EIH+DR G RDAA+LVN DDP  +EIWN VFIQFNRE DGSLK LPAKHVDTG+G ER+T
Sbjct: 183 EIHFDRIGGRDAAALVNADDPNVLEIWNNVFIQFNREPDGSLKSLPAKHVDTGMGLERIT 242

Query: 301 SILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFA 360
           S+LQ KMSNY TD+F PIFDAIQ  TGAR Y+ K+G DD+D VDMAYRVVADHIRTLSF+
Sbjct: 243 SVLQGKMSNYATDLFGPIFDAIQAVTGARDYTDKIGKDDSDGVDMAYRVVADHIRTLSFS 302

Query: 361 IADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQRE 420
           IADG+ PGNEGR+YVLRRILRRAVRYG E L A++GFF GLV++VV   G  FPEL ++ 
Sbjct: 303 IADGARPGNEGRDYVLRRILRRAVRYGREKLGAKEGFFAGLVDVVVAHFGGFFPELVKQR 362

Query: 421 AHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQLMA 480
             I  ++  EEA+F +TL+KGIE+FKKAA       + G +AF+LWDT+GFP+DLTQLMA
Sbjct: 363 DTIFGVLREEEAAFSRTLIKGIERFKKAAAGATDGKIPGPEAFVLWDTFGFPVDLTQLMA 422

Query: 481 EERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLAT------- 533
           EERG+ VD+ G+  AM EARE+             V  +   A LH     AT       
Sbjct: 423 EERGMAVDMAGYEAAMAEAREKMGETGRHGGFHHGVASSMVCAKLHGTYTGATVNSIPIS 482

Query: 534 -------DDSFKFIWFQDHKSVIKAIYTGSEFIESV--VPGNEVGIVLASSSFYAEQGGQ 584
                  +D+ K+    D  + + AI T   F        G  VG+VL ++SFYAE GGQ
Sbjct: 483 PPPPDWQNDAPKY-GSADVSAKVLAILTSGGFAAGSQEAEGGLVGLVLDTTSFYAESGGQ 541

Query: 585 IFDEG------FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRR 638
            F         F         + N  +  G+V+H+G + EG G+ +VGE V   VDY+RR
Sbjct: 542 HFSPSPELLTKFSSPSTSPELLTNPTVAAGYVLHVGEVAEG-GQVAVGEAVTVSVDYERR 600

Query: 639 KLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVN 698
            LI PNHT TH+LN+AL+ VLGDHVDQKGS+VLP+KLRFDFS+  PV+   L  +E I  
Sbjct: 601 GLIKPNHTFTHVLNYALKSVLGDHVDQKGSIVLPDKLRFDFSNAGPVEAAQLAAVEKICR 660

Query: 699 EQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLS 758
           E + A + VF  E  LA+AK INGLRAVFGEVYPDPVRVV+IGR V DLLADP+     +
Sbjct: 661 EAVAAAMPVFGTEVPLAQAKSINGLRAVFGEVYPDPVRVVSIGRSVADLLADPKADANAA 720

Query: 759 ISAELCGGTHLSNTREAEAFALLSEEGIAK 788
            S E CGGTHL+NT+EAEAFALLSEEGIAK
Sbjct: 721 YSIEFCGGTHLANTQEAEAFALLSEEGIAK 750


>gi|281350877|gb|EFB26461.1| hypothetical protein PANDA_021488 [Ailuropoda melanoleuca]
          Length = 976

 Score =  872 bits (2254), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 469/974 (48%), Positives = 607/974 (62%), Gaps = 71/974 (7%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A+++R  F  FF    H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  ++KL
Sbjct: 7   ASEIRQRFIDFFRRNEHTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A + A ELLT+ +
Sbjct: 67  SRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +P +RLY TYFGGDE AGL PD E + IW    L  +++LP   KDNFWEMGDTGPCGP
Sbjct: 127 GIPLERLYVTYFGGDEAAGLEPDLECKQIWQNLGLDDTKILPGNMKDNFWEMGDTGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G RDAA LVN DDP  +EIWN+VFIQ+NRESDG LKPLP K +DTG+G ER
Sbjct: 187 CSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNRESDGILKPLPKKSIDTGMGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+F+P F+AIQ+ TGARPYSGKVGADDAD +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYSGKVGADDADGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY  E L A  GFF  LV++VV+ +GD FPELK+
Sbjct: 307 VALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRGFFATLVDVVVQSLGDAFPELKK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
               +++II  EE  F KTL +G     +  Q +   K + G  A++L+DTYGFP+DLT 
Sbjct: 367 DPDMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDCKTIPGDTAWLLYDTYGFPVDLTG 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGG--AIVMDADATAALHKRGVLATDD 535
           L+AEE+GL+VD++GF      A+ +S   Q K AGG   I++D  A   L ++G+ ATDD
Sbjct: 427 LIAEEKGLVVDMDGFEEERKLAQLKS---QGKGAGGDDLIMLDIYAIEELREKGLEATDD 483

Query: 536 SFKFIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           S K+ +         F+   + + A+     F+E V  G E G+VL  + FYAEQGGQI+
Sbjct: 484 SPKYNYHSDSSGSYAFESTVATVMALRRDKMFVEEVCTGQECGVVLDKTCFYAEQGGQIY 543

Query: 587 DEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           DEG++  +  +      F V+N Q+ GG+V+HIG++    G   VG++V   +D  RR+ 
Sbjct: 544 DEGYLVKVEDNSEDKTEFTVKNAQVRGGYVLHIGTIY---GSLRVGDQVRLFIDEPRRRP 600

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           +  NHT TH+LNFALR VLG+  DQ+GS+V P++LRFDF+    +  + +++ E I N  
Sbjct: 601 VMSNHTATHILNFALRSVLGE-ADQRGSLVAPDRLRFDFTAKGAMSTQQIKKAEEIANGM 659

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I+A   V++++  LA AK I GLRAVF E YPDPVRVV+IG  V +LL DP        S
Sbjct: 660 IEAAKPVYTQDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTS 719

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLE-------- 812
            E CGGTHL N+  A AF L+SEE IAKGIRRI AVT   A KA   A SL+        
Sbjct: 720 VEFCGGTHLQNSSHAGAFVLVSEEAIAKGIRRIVAVTGAEAQKALRKAESLKNSLSIMEA 779

Query: 813 ---------KEVDDASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASN--- 860
                    K+V       G  L    + + QK    ENL+   K+  +   A+ ++   
Sbjct: 780 KVKAQTVPNKDVQREIADLGEALATAVIPQWQKDEFRENLKSLKKIMDDLDRASKADVQK 839

Query: 861 --------------GKPFCISRVEVGLDAAAVR-------EAVLKVIEQKG--MPVMVFS 897
                          +P  I  +E G  A A R          LK+ +        M+F+
Sbjct: 840 RVLEKTKQLIDSNPNQPLVILEMESGASAKATRGGGEGALNEALKLFKTHSPQTSAMLFT 899

Query: 898 TDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVT 957
            D    K      VP+ +  ++ L+ SEW+      + G+ G GK   A   G +   + 
Sbjct: 900 VDNEAGKITCLCQVPQNA-ANRGLKASEWVQQVSGLMDGK-GGGKDVSAQATGKNVGCLQ 957

Query: 958 PAMDLAAEFAAMKL 971
            A+ LAA FA + L
Sbjct: 958 EALQLAASFAQLHL 971


>gi|395836962|ref|XP_003791415.1| PREDICTED: alanine--tRNA ligase, cytoplasmic [Otolemur garnettii]
          Length = 968

 Score =  872 bits (2254), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 465/967 (48%), Positives = 618/967 (63%), Gaps = 65/967 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A+++R  F  FF+   H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  ++KL
Sbjct: 7   ASEIRQRFIDFFKRNEHTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A + A ELLT+ +
Sbjct: 67  SRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +P +RLY TYFGGDE AGL PD E + IW    L   ++LP   KDNFWEMGDTGPCGP
Sbjct: 127 GIPVERLYVTYFGGDEAAGLEPDLECKQIWQNLGLDDGKILPGNMKDNFWEMGDTGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G RDAA LVN DDP  +EIWN+VFIQ+NRE+DG LKPLP K +DTG+G ER
Sbjct: 187 CSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNRETDGILKPLPKKSIDTGMGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+F+P F+AIQ+ TGARPY+GKVGADDAD +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGADDADGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY  E L A  GFF  LV++VV+ +G+ FPELK+
Sbjct: 307 VALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRGFFATLVDVVVQSLGEAFPELKK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
               +++II  EE  F KTL +G     +  Q + + K + G  A++L+DTYGFP+DLT 
Sbjct: 367 DPDMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGETKTIPGDTAWLLYDTYGFPVDLTG 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
           L+AEE+GL+VD++GF      A+ +S   Q K AGG   I++D  A   L  +G+  TDD
Sbjct: 427 LIAEEKGLVVDMDGFEEERKLAQLKS---QGKGAGGEDLIMLDIYAIEELRAKGLEVTDD 483

Query: 536 SFKFIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           S K+ +         F++  + + A+     F+E V  G E G+VL  + FYAEQGGQI+
Sbjct: 484 SPKYNYHSDSSGSYVFENTVATVMALRREKMFVEEVSTGQECGVVLDKTCFYAEQGGQIY 543

Query: 587 DEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           DEG++  +  S      F V+N Q+ GG+V+HIG++    G   VG++V   +D  RR+ 
Sbjct: 544 DEGYLVKVDDSSEDKTEFTVKNAQVRGGYVLHIGTIY---GDLKVGDQVRLFIDEPRRRP 600

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           +  NHT TH+LNFALR VLG+  DQKGS+V P++LRFDF+    +  + +++ E I NE 
Sbjct: 601 VMSNHTATHILNFALRSVLGE-ADQKGSLVAPDRLRFDFTAKGAMSTQQIKKAEEIANEM 659

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I+A   V++++  L+ AK I GLRAVF E YPDPVRVV+IG  V  LL DP        S
Sbjct: 660 IEAAKPVYTQDCPLSTAKAIQGLRAVFDETYPDPVRVVSIGVPVSKLLDDPSGPAGSLTS 719

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSL--------- 811
            E CGGTHL N+  A AF +++EE IAKGIRRI AVT   A KA   A +L         
Sbjct: 720 VEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKAENLKTSLSIMEA 779

Query: 812 ------------EKEVDDASKIEGSLL----EKNQVRKAQKKVAE--ENLQKAVK----- 848
                       ++E+ D  +   + +    +K+++R+  K + +  ++L +A K     
Sbjct: 780 KVKVQTAPNKDVQREIADLGESLATAVIPQWQKDELRETLKSLKKIMDDLDRASKADVQK 839

Query: 849 -VATETAEAAASN-GKPFCISRVEVGLDAAAVREAVLKVIEQKG--MPVMVFSTDETTNK 904
            V  +T +   SN  +P  I  +E G  A A+ EA LK+ +        M+F+ D    K
Sbjct: 840 RVLEKTKQLIDSNPNQPLVILEMESGASAKALNEA-LKLFKTHSPQTSAMLFAVDNEAGK 898

Query: 905 AVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAA 964
                 VP+ +  ++ L+ SEW+      + G+ G GK   A   G +   +  A+ LA 
Sbjct: 899 ITCLCQVPQNA-ANRGLKASEWVQQVSGLMDGK-GGGKDMSAQATGKNVGCLQEALQLAT 956

Query: 965 EFAAMKL 971
            FA ++L
Sbjct: 957 SFAQLRL 963


>gi|397479616|ref|XP_003811107.1| PREDICTED: alanine--tRNA ligase, cytoplasmic [Pan paniscus]
 gi|410222120|gb|JAA08279.1| alanyl-tRNA synthetase [Pan troglodytes]
 gi|410355185|gb|JAA44196.1| alanyl-tRNA synthetase [Pan troglodytes]
          Length = 968

 Score =  872 bits (2253), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 467/966 (48%), Positives = 617/966 (63%), Gaps = 63/966 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A+++R  F  FF+   H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  ++KL
Sbjct: 7   ASEIRQRFIDFFKRNEHTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A + A ELLT+ +
Sbjct: 67  SRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +P +RLY TYFGGDE AGL  D E + IW    L  +++LP   KDNFWEMGDTGPCGP
Sbjct: 127 GIPIERLYVTYFGGDEAAGLEADLECKQIWQNLGLDDTKILPGNMKDNFWEMGDTGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G RDAA LVN DDP  +EIWN+VFIQ+NRE+DG LKPLP K +DTG+G ER
Sbjct: 187 CSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNREADGILKPLPKKSIDTGMGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+F+P F+AIQ+ TGARPY+GKVGA+DAD +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY  E L A  GFF  LV++VV+ +GD FPELK+
Sbjct: 307 VALADGGRPDNTGRGYVLRRILRRAVRYAHEKLNAIRGFFATLVDVVVQSLGDAFPELKK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
               +++II  EE  F KTL +G     +  Q +   K + G  A++L+DTYGFP+DLT 
Sbjct: 367 DPDMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTG 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
           L+AEE+GL+VD++GF      A+ +S   Q K AGG   I++D  A   L  RG+  TDD
Sbjct: 427 LIAEEKGLVVDMDGFEEERKLAQLKS---QGKGAGGEDLIMLDIYAIEELRARGLEVTDD 483

Query: 536 SFKFIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           S K+ +         F++  + + A+     F+E V  G E G+VL  + FYAEQGGQI+
Sbjct: 484 SPKYNYHLDSSGSYVFENTVATVMALRREKMFVEEVSTGQECGVVLDKTCFYAEQGGQIY 543

Query: 587 DEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           DEG++  +  S      F V+N Q+ GG+V+HIG++    G   VG++V   +D  RR+ 
Sbjct: 544 DEGYLVKVDDSSEDKTEFTVKNAQVRGGYVLHIGTIY---GDLKVGDQVWLFIDEPRRRP 600

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           I  NHT TH+LNFALR VLG+  DQKGS+V P++LRFDF+    +  + +++ E I NE 
Sbjct: 601 IMSNHTATHILNFALRSVLGE-ADQKGSLVAPDRLRFDFTAKGAMSTQQIKKAEEIANEM 659

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I+A   V++++  LA AK I GLRAVF E YPDPVRVV+IG  V +LL DP        S
Sbjct: 660 IEAAKAVYTQDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTS 719

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEK------- 813
            E CGGTHL N+  A AF +++EE IAKGIRRI AVT   A KA   A S++K       
Sbjct: 720 VEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKAESMKKCLSVMEA 779

Query: 814 --------------EVDDASKIEGSLL----EKNQVRKAQKKVAE--ENLQKAVK----- 848
                         E+ D  +   + +    +K+++R+  K + +  ++L +A K     
Sbjct: 780 KVKAQTAPNKDVQREIADLGEALATAVIPQWQKDELRETLKSLKKVMDDLDRASKADVQK 839

Query: 849 -VATETAEAAASN-GKPFCISRVEVGLDAAAVREAV-LKVIEQKGMPVMVFSTDETTNKA 905
            V  +T +   SN  +P  I  +E G  A A+ EA+ L  +       M+F+ D    K 
Sbjct: 840 RVLEKTKQFIDSNPNQPLVILEMESGASAKALNEALKLFKMHSPQTSAMLFTVDNEAGKI 899

Query: 906 VVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAE 965
                VP+ +  ++ L+ SEW+      + G+ G GK   A   G +   +  A+ LA  
Sbjct: 900 TCLCQVPQNA-ANRGLKASEWVQQVSGLMDGK-GGGKDVSAQATGKNVGCLQEALQLATS 957

Query: 966 FAAMKL 971
           FA ++L
Sbjct: 958 FAQLRL 963


>gi|320164762|gb|EFW41661.1| alanyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
          Length = 954

 Score =  872 bits (2253), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 495/965 (51%), Positives = 631/965 (65%), Gaps = 61/965 (6%)

Query: 56  VEW---PATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADP 112
           V+W   PA+ VR  F  FF  K H    SS V+P +DPTLLFANAGMNQ+KP FLGTADP
Sbjct: 3   VDWTTAPASAVRQQFVDFFVSKGHEFVPSSSVIPHDDPTLLFANAGMNQFKPAFLGTADP 62

Query: 113 NTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAW 172
           N++++K  R  N+QKCIRAGGKHNDL+DVGKD YHHTFFEMLGNWSFGDYFK EAI WAW
Sbjct: 63  NSRMAKYRRTANSQKCIRAGGKHNDLEDVGKDVYHHTFFEMLGNWSFGDYFKKEAISWAW 122

Query: 173 ELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMG 231
           ELLT VY+L  +RLY TYFGG+EKAGL  D EARDIWL   LPA RVLP+G K+NFWEMG
Sbjct: 123 ELLTVVYKLDPNRLYVTYFGGNEKAGLEADLEARDIWLSVGLPAERVLPYGMKENFWEMG 182

Query: 232 DTGPCGPCSEIHYDRTGN-RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHV 290
           +TGPCGPCSEIH+DR G  RDAA+LVN DDP  +EIWN+VFIQFNRE D SL+ LP  HV
Sbjct: 183 ETGPCGPCSEIHFDRIGGGRDAAALVNADDPDVLEIWNLVFIQFNREVDQSLRKLPRCHV 242

Query: 291 DTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVV 350
           DTG+G ER+ S+LQNK SNYDTDVF+P F AIQ ATG R Y+GKVGADD D +DMAYRVV
Sbjct: 243 DTGMGLERIVSVLQNKRSNYDTDVFVPYFTAIQAATGIRAYTGKVGADDTDGLDMAYRVV 302

Query: 351 ADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMG 410
           ADHIRTL+ A+ADG  PG  GR+YVLRR+LRRAVRY +E L A+ GFF  LV++V   +G
Sbjct: 303 ADHIRTLTIALADGGAPGPTGRDYVLRRVLRRAVRYCAEKLGAKPGFFASLVDVVGTSLG 362

Query: 411 DVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYG 470
             FPEL +    I++II  EEA F KTL +G   F++AA   +  V+ G  A+ L+DTYG
Sbjct: 363 GFFPELVRSPQDIKDIINEEEAQFRKTLDRGKRLFERAAAASKNGVIEGLVAWRLYDTYG 422

Query: 471 FPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGV 530
           FPLDLT+LMA E  L +D  GF  A  +A+E S+   + +A   +V+D    +AL  +GV
Sbjct: 423 FPLDLTELMAAELKLTIDKPGFKIAEADAKEASKGKVD-EAEETVVLDVHNISALKDKGV 481

Query: 531 LATDDSFKFIW--------FQDHKSVIKAIYTGSEFIESV----VPGNEVGIVLASSSFY 578
            ATDDS KF +        F+     I AI  G E + +V    + G +VGIVL  ++FY
Sbjct: 482 PATDDSPKFNYRSENDKYTFESAVGSIVAIALGKELVSTVDFESLKGAKVGIVLDKTNFY 541

Query: 579 AEQGGQIFDEGF---IEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDY 635
           AEQGGQIFD GF   ++     F + +V++YG +V+H+G L    G  S+G+++   +D 
Sbjct: 542 AEQGGQIFDTGFATRVDNEASEFAIESVKVYGPYVLHVGRLQ--GGSLSIGDKLTLSIDD 599

Query: 636 DRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIES 695
            RR  I  NHT THMLNFALREVLG+ VDQKGS+V P+  RFDFSH K V  E LR+IE 
Sbjct: 600 IRRLPIMANHTTTHMLNFALREVLGNSVDQKGSLVRPDNFRFDFSHPKAVSTEELRKIEK 659

Query: 696 IVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKE 755
           IVN+ I+    V+     L  AK + GLRAVF EVYPDPVRVV++G  VE LLADP +  
Sbjct: 660 IVNDIIEKNETVYRVPTALHLAKEVAGLRAVFDEVYPDPVRVVSVGVPVEKLLADPASAS 719

Query: 756 WLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV 815
           W   S E CGGTH+  TR+A  FA+  EEGIAKGIRRI+ +T   A +A++ A  LE +V
Sbjct: 720 WKGYSIEFCGGTHIDRTRDARRFAIFREEGIAKGIRRISGITGKEAIEAYKTADKLEAKV 779

Query: 816 DDASKIE--------GSLLE-----------KNQVRKA----QKKVAE-ENLQKA--VKV 849
              S+I          SL+E           K++++ A     K+V++ E  Q+A   K+
Sbjct: 780 KQVSEIPIGQLGRELPSLIESVDTAVIPSFRKDEIKAAIAAISKRVSDHEKAQQAEQTKI 839

Query: 850 ATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCA 909
           AT   +     G PF ++ V++  +  A+   +    +  G+ V      +  +  +  A
Sbjct: 840 ATAAVKERIDAGAPFVVAFVDINGNRKAMSAGLSAAKDAAGLLV-----SKDGDSIIAVA 894

Query: 910 GVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKG--GLASGQGTDAAQVTPAMDLAAEFA 967
            VP+      +++  EW+T A++ L      G    G ASG G+D A V   +D A +FA
Sbjct: 895 SVPKA--LVGKIKAGEWVTEAVKSLSNTKTGGADTVGQASGTGSDHAAV---IDAATKFA 949

Query: 968 AMKLR 972
           A +L+
Sbjct: 950 AARLQ 954


>gi|380810080|gb|AFE76915.1| alanyl-tRNA synthetase, cytoplasmic [Macaca mulatta]
          Length = 968

 Score =  872 bits (2252), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 468/967 (48%), Positives = 618/967 (63%), Gaps = 65/967 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A+++R  F  FF+   H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  ++KL
Sbjct: 7   ASEIRQRFIDFFKRNEHTYIHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A + A ELLT+ +
Sbjct: 67  SRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +P  RLY TYFGGDE AGL PD E + IW    L  +++LP   KDNFWEMGDTGPCGP
Sbjct: 127 GIPIGRLYVTYFGGDEAAGLEPDLECKQIWQNLGLDDTKILPGNMKDNFWEMGDTGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G RDAA LVN DDP  +EIWN+VFIQ+NRE+DG LKPLP K +DTG+G ER
Sbjct: 187 CSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNREADGILKPLPKKSIDTGMGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+F+P F+AIQ+ TGARPY+GKVGA+DAD +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY  E L A  GFF  LV++VV+ +GD FPELK+
Sbjct: 307 VALADGGRPDNTGRGYVLRRILRRAVRYAHEKLNASRGFFATLVDVVVQSLGDAFPELKK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
               +++I+  EE  F KTL +G     +  Q +   K + G  A++L+DTYGFP+DLT 
Sbjct: 367 DPDMVKDIVNEEEVQFLKTLSRGRRILDRKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTG 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
           L+AEE+GL+VD++GF      A+ +S   Q K AGG   I++D  A   L  RG+  TDD
Sbjct: 427 LIAEEKGLVVDMDGFEEERKLAQLKS---QGKGAGGEDLIMLDIYAIEELRARGLEVTDD 483

Query: 536 SFKFIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           S K+ +         F++  + + A+     F+E V  G E G+VL  + FYAEQGGQI+
Sbjct: 484 SPKYNYHLDFSGSYVFENTVATVMALRREKMFVEEVSTGQECGVVLDKTCFYAEQGGQIY 543

Query: 587 DEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           DEG++  +  S      F V+N Q+ GG+V+HIG++    G   VG++V   +D  RR+ 
Sbjct: 544 DEGYLVKVDDSSEDKTEFTVKNAQVRGGYVLHIGTIY---GDLKVGDQVRLFIDEPRRRP 600

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           I  NHT TH+LNFALR VLG+  DQKGS+V P++LRFDF+    +  + +++ E I +E 
Sbjct: 601 IMSNHTATHILNFALRSVLGE-ADQKGSLVAPDRLRFDFTAKGAMSTQQIKKAEEIASEM 659

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I+A   V++++  LA AK I GLRAVF E YPDPVRVV+IG  V +LL DP        S
Sbjct: 660 IEAAKPVYTQDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTS 719

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEK------- 813
            E CGGTHL N+  A AF +++EE IAKGIRRI AVT   A KA   A SL+K       
Sbjct: 720 VEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKAESLKKSLSVMEA 779

Query: 814 --------------EVDDASKIEGSLL----EKNQVRKAQKKVAE--ENLQKAVK----- 848
                         E+ D  +   + +    +K+++R+  K + +  ++L +A K     
Sbjct: 780 KVKAQTAPNKDVQREIADLGEALATAVIPQWQKDELRETLKSLKKVMDDLDRASKADVQK 839

Query: 849 -VATETAEAAASN-GKPFCISRVEVGLDAAAVREAVLKVIEQKG--MPVMVFSTDETTNK 904
            V  +T +   SN  +P  I  +E G  A A+ EA LK+ +        M+F+ D    K
Sbjct: 840 RVLEKTKQLIDSNPNQPLVILEMESGASAKALNEA-LKLFKTHSPQTSAMLFTVDNEAGK 898

Query: 905 AVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAA 964
                 VP+ +  ++ L+ SEW+      + G+ G GK   A   G +   +  A+ LA 
Sbjct: 899 ITCLCQVPQNA-ANRGLKASEWVQQVSGLMDGK-GGGKDVSAQATGKNIGCLQEALQLAT 956

Query: 965 EFAAMKL 971
            FA ++L
Sbjct: 957 SFAQLRL 963


>gi|360043626|emb|CCD81172.1| putative alanyl-tRNA synthetase [Schistosoma mansoni]
          Length = 980

 Score =  872 bits (2252), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 465/980 (47%), Positives = 620/980 (63%), Gaps = 77/980 (7%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R  FF+FFE K HV   SS  +P NDPTLLFANAGMNQYKPIF GT DPN++L +L
Sbjct: 7   AKELRKQFFEFFESKGHVYVHSSSTIPHNDPTLLFANAGMNQYKPIFQGTVDPNSELGRL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R+ N+QKCIRAGGKHNDLDDVG+D YHHTFFEMLGNWSFGDYFK EA EWAWELLT+V+
Sbjct: 67  KRSYNSQKCIRAGGKHNDLDDVGRDVYHHTFFEMLGNWSFGDYFKKEACEWAWELLTEVW 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
           ++P++RLY TYFGGD   GL  D EARDIW+   LP   VLPFG K+NFWEMG+TGPCGP
Sbjct: 127 KIPSERLYVTYFGGDISNGLPADEEARDIWISIGLPKDHVLPFGMKENFWEMGETGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G+RDAA LVN DDP  +EIWN+VFIQFNRE  GSLKPLPAKH+DTG+GFER
Sbjct: 187 CSEIHYDRMGDRDAAHLVNQDDPDVLEIWNLVFIQFNREEGGSLKPLPAKHIDTGMGFER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           + S+LQNK SNYDTD+F+P+F  I+  T  RPY+GKVG +D DK+DMAYRV+ADH R L+
Sbjct: 247 VLSVLQNKRSNYDTDLFVPLFKTIEAGTNTRPYTGKVGVEDTDKIDMAYRVLADHARVLT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ DG    N GR YV+RRILRRAVR+  EVL A+ GF   LV+IV++ +GD FPE+ +
Sbjct: 307 IALGDGGRAQNTGRGYVIRRILRRAVRFAVEVLNAKPGFLATLVDIVIETLGDAFPEITR 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK-----VLSGQDAFILWDTYGFPL 473
               I+E+I  EE  F  TL +G   F +  +D++        LSG+ A+ L++TYGFPL
Sbjct: 367 DPDTIKELINEEEEQFLVTLKRGRRFFDRVIKDLKASGSNNTTLSGEVAWGLYETYGFPL 426

Query: 474 DLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIV-MDADATAALHKRGVLA 532
           DLTQ++AEE  L +D+ G+  A +EA+ RS+S   K  GG+I+ +   A A L  + +  
Sbjct: 427 DLTQILAEEHHLKIDLNGYEKAKEEAQIRSQS--RKCTGGSIIDLTVHALAELKSKNISV 484

Query: 533 TDDSFKFIW---------FQDHKSVIKAIYTGSEFIESV-VPGNEVGIVLASSSFYAEQG 582
           TDDS KF++         F D ++ + AI   ++F+ESV +     GI+L  + FYAE G
Sbjct: 485 TDDSEKFVYTSDLNGNYVFPDSEATVLAILYENKFVESVDLSSQMCGIILNKTIFYAESG 544

Query: 583 GQIFDEGFIEGL---FGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRK 639
           GQ++D GFI  L      F V +VQ  GG+++HIG+L    G+  VG  V+  +D  RR 
Sbjct: 545 GQLYDHGFITSLTDEVTEFSVSDVQCRGGYILHIGNL---HGKLIVGNRVLLSLDTVRRT 601

Query: 640 LIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNE 699
            +  NHT TH+LNFALRE++ D  +QKGS+V P++LRFDF+  + +  + L + E I + 
Sbjct: 602 ALMRNHTGTHVLNFALRELV-DESEQKGSLVAPDRLRFDFTAKRGMTRDELAKAEEICDT 660

Query: 700 QIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSI 759
            I   L+V+S   +L+ AK I G+RAVFGE YPDPVRVV+IG  V  L+ADPE     + 
Sbjct: 661 MISKRLNVYSSNVSLSYAKTIQGVRAVFGEAYPDPVRVVSIGVPVTSLVADPETGYGKTT 720

Query: 760 SAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDAS 819
           S E CGGTH+ NT+      ++SEE I+KG+RRI A+T   A +A + A  L+ EV++  
Sbjct: 721 SVEFCGGTHVLNTKHIGVLVIVSEEAISKGVRRIIALTGHEAERAQKEALRLDNEVNEFI 780

Query: 820 KIEGSLLEKNQ---------------------------VRKAQKKVAEENLQKAVKV--- 849
           K+    +  +Q                           + +  ++   E L KA K+   
Sbjct: 781 KLVNQSISLHQNHNNNITDDFNINRQMSNLSEHVSRAVISQHHRENLREKLFKAKKLLDA 840

Query: 850 ---ATETA-------------EAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQ--KGM 891
              A++TA             E+ A++   + I   +   +   +  A+ K IE+     
Sbjct: 841 RDKASKTAITSKVLEEARLLGESLANSPSNYIIHVFDAQSNTKIMNSAI-KEIERICPNK 899

Query: 892 PVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGT 951
            VMV S+D T+ K  V   VP K   S+ L+ +EW+T   + + G+ G GK   A   G+
Sbjct: 900 AVMVISSDLTSKKLTVLCQVP-KVLISRGLKANEWVTHISKTMDGK-GGGKENSAQAVGS 957

Query: 952 DAAQVTPAMDLAAEFAAMKL 971
               +   + LA  FA  KL
Sbjct: 958 RIDTLDEVIHLADIFANTKL 977


>gi|50286987|ref|XP_445923.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49525229|emb|CAG58842.1| unnamed protein product [Candida glabrata]
          Length = 956

 Score =  872 bits (2252), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 428/791 (54%), Positives = 551/791 (69%), Gaps = 10/791 (1%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           +W A  VR TF  +FE+KNH   KSSPVVP +DPTLLF NAGMNQYKPIFLGT DP++  
Sbjct: 8   KWTAHNVRKTFMDYFEEKNHKYVKSSPVVPFDDPTLLFTNAGMNQYKPIFLGTVDPSSDF 67

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
             L RA N+QKCIRAGGKHNDL+DVGKD+YHHTFFEMLGNWSFGDYFK EAI++AW+LLT
Sbjct: 68  YTLKRAYNSQKCIRAGGKHNDLEDVGKDSYHHTFFEMLGNWSFGDYFKKEAIDYAWKLLT 127

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
           +VY +PADRLY TYF GD K GL PD EA D+W K  +P   +LP   KDNFWEMGD GP
Sbjct: 128 EVYGIPADRLYVTYFEGDAKQGLEPDTEALDLWKKVGVPEDHILPGNAKDNFWEMGDQGP 187

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPCSEIHYDR G R+AASLVN DDP  +E+WN+VF+QFNRE DGSLK LPAKH+DTG+G
Sbjct: 188 CGPCSEIHYDRIGGRNAASLVNQDDPDVLEVWNLVFMQFNREQDGSLKSLPAKHIDTGMG 247

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
           FERL S+LQ+  SNYDTDVFMP+F  IQ+ TGARPY+GK G +D D +D  YRV+ADH+R
Sbjct: 248 FERLVSVLQDVRSNYDTDVFMPLFARIQEITGARPYAGKFGDEDKDNIDTTYRVLADHVR 307

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFP 414
           TL FA+ADG  P NEGR YVLRRILRR  R+  + +    G FF+ L   ++  +  +FP
Sbjct: 308 TLVFALADGGVPNNEGRGYVLRRILRRGARFARKYMNYPIGNFFSSLAPTLIDQVKHIFP 367

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTYGF 471
           E+ +  + + EI+  EE+SF KTL +G    EK+  AA   + K L G+  + L+DTYGF
Sbjct: 368 EVAKDPSFLFEILDEEESSFSKTLDRGERIFEKYAAAASQTESKTLDGKQVWRLYDTYGF 427

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           P+DLT+LMAEE+ L +D  GF  A  E+ E S+    K     I ++  + A L+   V 
Sbjct: 428 PVDLTELMAEEQNLKIDGPGFEKAKQESYEASKRGGQKGGDDLIKLNVHSIAELNSENVP 487

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVV-PGNEVGIVLASSSFYAEQGGQIFDEG- 589
            TDDSFK+   ++ +  I  ++ G +F+  +  PG + GI+L  + FYAEQGGQ +D G 
Sbjct: 488 KTDDSFKY-GNENVEGKILKLHDGEKFVTEISEPGKKYGIILDKTCFYAEQGGQEYDTGK 546

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
            +      F V NVQ+Y GFV H G+L+E  G+ SV + +I   D  RR  I  NHT TH
Sbjct: 547 IVIDDKAEFSVENVQLYNGFVFHTGTLSE--GKLSVDDVIIASYDELRRFPIKNNHTGTH 604

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +LN+AL+E LG+ +DQKGS+V PEKLRFDFSH K +  E + ++E+I NEQIK   +V+ 
Sbjct: 605 ILNYALKETLGNDIDQKGSLVAPEKLRFDFSHKKALTIEEVTKVENICNEQIKNNYNVYY 664

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
           K+  L  AK I  +RAVFGE YPDPVRVV++G+ V+DLLA+P N+EW   S E CGGTH+
Sbjct: 665 KDVPLDLAKSIYSVRAVFGETYPDPVRVVSVGKPVDDLLANPSNEEWGKYSIEFCGGTHV 724

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKN 829
             T + + F +L E GIAKGIRRI AVT   A++A   A     +++ A K+  S L++ 
Sbjct: 725 KTTGDIKYFVILEESGIAKGIRRIVAVTGTEAFEAQRVADQFAADLEAADKLPFSPLKEK 784

Query: 830 QVRKAQKKVAE 840
           ++++   K+ +
Sbjct: 785 KLKELGVKLGQ 795


>gi|254581276|ref|XP_002496623.1| ZYRO0D04378p [Zygosaccharomyces rouxii]
 gi|238939515|emb|CAR27690.1| ZYRO0D04378p [Zygosaccharomyces rouxii]
          Length = 956

 Score =  872 bits (2252), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 458/946 (48%), Positives = 602/946 (63%), Gaps = 45/946 (4%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           +W AT VR  F  FF+ K+H    SSPVVP +DPTLLFANAGMNQYKPIFLGT DP++  
Sbjct: 8   KWTATNVRKAFLDFFKSKDHKFVASSPVVPYDDPTLLFANAGMNQYKPIFLGTVDPSSDF 67

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
             L RA N+QKCIRAGGKHNDL+DVGKD+YHHTFFEMLGNWSFGDYFK  AI +AWELLT
Sbjct: 68  YHLKRAYNSQKCIRAGGKHNDLEDVGKDSYHHTFFEMLGNWSFGDYFKQGAISYAWELLT 127

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
           KVY LPADRLY TYF GD K GL  D EA ++W    +  S +LP   +DNFWEMGD GP
Sbjct: 128 KVYGLPADRLYVTYFEGDPKNGLEADMEAFELWKSVGVDESHILPGNAEDNFWEMGDQGP 187

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPCSEIH+DR G R+AASLVN DDP  +E+WN+VF+QFNRE DGSLKPLPAKH+DTG+G
Sbjct: 188 CGPCSEIHFDRIGGRNAASLVNMDDPDVLEVWNLVFMQFNREQDGSLKPLPAKHIDTGMG 247

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
           FER+ SILQ+  SNYDTDVF P+F  I + TG RPY+GK GA+D D +D AYRV+ADH+R
Sbjct: 248 FERVVSILQDYRSNYDTDVFTPLFARIHEVTGVRPYAGKFGAEDTDGIDTAYRVLADHVR 307

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFP 414
           TL FAIADG  P NEGR YVLRRILRR  R+  + +    G FF+ LV  ++  + D+FP
Sbjct: 308 TLVFAIADGGVPNNEGRGYVLRRILRRGARFARKYMNYPIGDFFSRLVPTLISQVQDIFP 367

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTYGF 471
           E+ +  +++ EI+  EE SF KTL +G    EK+  AA     K L G   + L+DTYGF
Sbjct: 368 EVAKDPSYLFEILNEEEVSFAKTLDRGERLFEKYADAATSSGKKTLDGLQVWRLYDTYGF 427

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           P+DLT+LMAEE+GL +D  GF  A  E+ E S+    K     + ++    + L+   V 
Sbjct: 428 PVDLTELMAEEKGLTIDGPGFEKAKQESYEASKRGGKKDGAEVLKLNVHEISELNGENVP 487

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVV-PGNEVGIVLASSSFYAEQGGQIFDEG- 589
            T D +K+   ++  S I  ++ G++F+  +  PG + G++L  + FYAEQGGQ +D G 
Sbjct: 488 KTKDEYKY-GMENVDSTILKLHDGTKFVNEISEPGKKYGVILDKTCFYAEQGGQEYDTGK 546

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
            +      F V NVQ+Y GFV H GSL E  G+ SVG ++I   D  RR  I  NHT TH
Sbjct: 547 LVIDDVAEFNVENVQLYNGFVFHTGSLLE--GKLSVGNKIIASYDELRRFPIKNNHTGTH 604

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +LNFALREVLG+ ++QKGS+V PEKLRFDFSH K +  + + ++E I N+QIK  + V+ 
Sbjct: 605 ILNFALREVLGNDIEQKGSLVAPEKLRFDFSHKKGMAADEILKVEDICNKQIKENMSVYY 664

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
           K+  L +AK I G+RAVFGE YPDPVRVV++G+ V+DLLA+P N+EW   S E CGGTH+
Sbjct: 665 KDVPLTDAKSIYGVRAVFGETYPDPVRVVSVGKSVDDLLANPSNEEWSKYSVEFCGGTHV 724

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKN 829
             T + + F +L E GIAKGIRRI AVT   AY+A   A   +KE++   ++  S L++ 
Sbjct: 725 VKTGDIKVFVILEESGIAKGIRRIVAVTGSEAYEAQRIANEFDKELNAVDRLPFSPLKEK 784

Query: 830 QVRKAQKKVAEENL----------------------------QKAVKVATETAEAAASN- 860
           ++++   K+ + ++                            Q++ K   E  E  A N 
Sbjct: 785 KLKELSVKLGQLSISVVSKQELKTKFAKIEKVVKDEIKTRAKQESKKTLDEVKEYFAKNE 844

Query: 861 GKPFCISRVEVGLDAAAVREAVLKVIEQ-KGMPVMVFSTDETTNKAVVCAGVPEKSDQSK 919
              F    V++  +A A+ EAV  V    K   + +F+ ++   K      + + +  SK
Sbjct: 845 NSQFLAKFVDIPTNAKAITEAVNYVKSSAKDKSIYLFTGNDPEGKIAHGCYISDAA-LSK 903

Query: 920 QLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAE 965
            ++ S         + G+ G G+G +  G G    + T A D  AE
Sbjct: 904 GIDGSTVAKQVSGIIGGKAG-GRGNVFQGMGD---KPTAAGDAVAE 945


>gi|1015321|dbj|BAA06808.1| alanyl-tRNA synthetase [Homo sapiens]
          Length = 968

 Score =  872 bits (2252), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 467/966 (48%), Positives = 616/966 (63%), Gaps = 63/966 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A+++R  F  FF+   H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  ++KL
Sbjct: 7   ASEIRQRFIDFFKRNEHTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA NTQKCIRAGGK NDLDDVGKD YHHTFFEMLG+WSFGDYFK  A + A ELLT+ +
Sbjct: 67  SRAANTQKCIRAGGKQNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +P +RLY TYFGGDE AGL  D E + IW    L  +++LP   KDNFWEMGDTGPCGP
Sbjct: 127 GIPIERLYVTYFGGDEAAGLEADLECKQIWQNLGLDDTKILPGNMKDNFWEMGDTGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G RDAA LVN DDP  +EIWN+VFIQ+NRE+DG LKPLP K +DTG+G ER
Sbjct: 187 CSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNREADGILKPLPKKSIDTGMGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+F+P F+AIQ+ TGARPY+GKVGA+DAD +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY  E L A  GFF  LV++VV+ +GD FPELK+
Sbjct: 307 VALADGGRPDNTGRGYVLRRILRRAVRYAHEKLNASRGFFATLVDVVVQSLGDAFPELKK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
               +++II  EE  F KTL +G     +  Q +   K + G  A++L+DTYGFP+DLT 
Sbjct: 367 DPDMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTG 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
           L+AEE+GL+VD++GF      A+ +S   Q K AGG   I++D  A   L  RG+  TDD
Sbjct: 427 LIAEEKGLVVDMDGFEEERKLAQLKS---QGKGAGGEDLIMLDIYAIEELRARGLEVTDD 483

Query: 536 SFKFIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           S K+ +         F++  + + A+     F+E V  G E G+VL  + FYAEQGGQI+
Sbjct: 484 SPKYNYHLDSSGSYVFENTVATVMALRREKMFVEEVSTGQECGVVLDKTCFYAEQGGQIY 543

Query: 587 DEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           DEG++  +  S      F V+N Q+ GG+V+HIG++    G   VG++V   +D  RR+ 
Sbjct: 544 DEGYLVKVDDSSEDKTEFTVKNAQVRGGYVLHIGTIY---GDLKVGDQVWLFIDEPRRRP 600

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           I  NHT TH+LNFALR VLG+  DQKGS+V P++LRFDF+    +  + +++ E I NE 
Sbjct: 601 IMSNHTATHILNFALRSVLGE-ADQKGSLVAPDRLRFDFTAKGAMSTQQIKKAEEIANEM 659

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I+A   V++++  LA AK I GLRAVF E YPDPVRVV+IG  V +LL DP        S
Sbjct: 660 IEAAKAVYTQDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTS 719

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEK------- 813
            E CGGTHL N+  A AF +++EE IAKGIRRI AVT   A KA   A SL+K       
Sbjct: 720 VEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKAESLKKCLSVMEA 779

Query: 814 --------------EVDDASKIEGSLL----EKNQVRKAQKKVAE--ENLQKAVK----- 848
                         E+ D  +   + +    +K+++R+  K + +  ++L +A K     
Sbjct: 780 KVKAQTAPNKDVQREIADLGEALATAVIPQWQKDELRETLKSLKKVMDDLDRASKADVQK 839

Query: 849 -VATETAEAAASN-GKPFCISRVEVGLDAAAVREAV-LKVIEQKGMPVMVFSTDETTNKA 905
            V  +T +   SN  +P  I  +E G  A A+ EA+ L  +       M+F+ D    K 
Sbjct: 840 RVLEKTKQFIDSNPNQPLVILEMESGASAKALNEALKLFKMHSPQTSAMLFTVDNEAGKI 899

Query: 906 VVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAE 965
                VP+ +  ++ L+ SEW+      + G+ G GK   A   G +   +  A+ LA  
Sbjct: 900 TCLCQVPQNA-ANRGLKASEWVQQVSGLMDGK-GGGKDVSAQATGKNVGCLQEALQLATS 957

Query: 966 FAAMKL 971
           FA ++L
Sbjct: 958 FAQLRL 963


>gi|367017930|ref|XP_003683463.1| hypothetical protein TDEL_0H03930 [Torulaspora delbrueckii]
 gi|359751127|emb|CCE94252.1| hypothetical protein TDEL_0H03930 [Torulaspora delbrueckii]
          Length = 956

 Score =  872 bits (2252), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 444/862 (51%), Positives = 572/862 (66%), Gaps = 41/862 (4%)

Query: 58  WPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLS 117
           W A  VR+TF  +F+ K H    SSPV+P +DPTLLFANAGMNQYKPIFLGT DP +   
Sbjct: 9   WTAKNVRNTFLDYFKSKEHRFVPSSPVIPYDDPTLLFANAGMNQYKPIFLGTVDPASDFY 68

Query: 118 KLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTK 177
            + RA N+QKCIRAGGKHNDL+DVG+D+YHHTFFEMLGNWSFGDYFK EAI ++WELLTK
Sbjct: 69  TMKRAYNSQKCIRAGGKHNDLEDVGRDSYHHTFFEMLGNWSFGDYFKKEAINYSWELLTK 128

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPC 236
           VY +PADRLY TYF GD K GL PD EA ++W    +P   +LP   KDNFWEMGD GPC
Sbjct: 129 VYGIPADRLYVTYFEGDSKQGLEPDVEALELWKSVGVPEDHILPGNAKDNFWEMGDQGPC 188

Query: 237 GPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGF 296
           GPCSEIHYDR G R+AASLVN DDP  +E+WN+VFIQFNRE DGSLK LPAKH+DTG+GF
Sbjct: 189 GPCSEIHYDRIGGRNAASLVNQDDPDVLEVWNLVFIQFNREQDGSLKSLPAKHIDTGMGF 248

Query: 297 ERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRT 356
           ERL S+LQ+  SNYDTDVFMP+F +IQ+ TGARPY+GK G +DAD VD AYRV+ADH+RT
Sbjct: 249 ERLVSVLQDCRSNYDTDVFMPLFASIQELTGARPYAGKFGTEDADGVDTAYRVLADHVRT 308

Query: 357 LSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFPE 415
           L+FA+ADG  P NEGR YVLRRILRR  RY  + +    G FF+ L   ++  + ++FPE
Sbjct: 309 LTFALADGGVPNNEGRGYVLRRILRRGARYARKYMNYPIGNFFSRLAPTLIDQVQEMFPE 368

Query: 416 LKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTYGFP 472
           + +  + + EI+  EEASF KTL +G    EK+  AA     K L G   + L+DTYGFP
Sbjct: 369 VAKDPSFLFEILDEEEASFAKTLDRGERLFEKYADAAAQSGNKTLDGLQVWRLYDTYGFP 428

Query: 473 LDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLA 532
           +DLT+LMAEE+GL +D  GF  A  E+ E S+    K     + ++    + L++  V  
Sbjct: 429 VDLTELMAEEKGLTIDGPGFEKAKQESYEASKRGGKKDNSSLLKLNVHELSQLNEEHVPK 488

Query: 533 TDDSFKFIWFQDHKSVIKAIYTGSEFIESVV-PGNEVGIVLASSSFYAEQGGQIFDEG-- 589
           TDDS K+   QD  + I  ++ GS+F+  +  PG + GI+L  + FYAEQGGQ +D G  
Sbjct: 489 TDDSAKY-GTQDVDATILRLFDGSQFVNEITEPGKKYGIILDKTCFYAEQGGQEYDMGKI 547

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
            I+G    F V NVQ+Y GFV H G+L E  G+ S+ +++I   D  RR  I  NHT TH
Sbjct: 548 VIDGS-AEFDVDNVQLYNGFVFHTGTLLE--GKLSINDKIIASYDELRRFPIRNNHTGTH 604

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +LN+ L E LG  VDQKGS+V PEKLRFDFSH K +  + LR++E+I NEQIK  L V+ 
Sbjct: 605 ILNYGLLETLGTEVDQKGSLVAPEKLRFDFSHKKALTVDELRKVENISNEQIKQNLSVYY 664

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
           K+  L  A+ I  +RAVFGE YPDPVRVV++GR V++LL +P ++EW   S E CGGTH+
Sbjct: 665 KDVPLDLARSIYNVRAVFGETYPDPVRVVSVGRPVDELLENPASEEWGKYSIEFCGGTHV 724

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKN 829
           + T +   F +L E GIAKGIRRI AVT   A++A   A   E E+  A K+  S L++ 
Sbjct: 725 AKTSDIREFVILEESGIAKGIRRIVAVTGSEAHEAQRIAKQYESELLAAEKLPFSPLKEK 784

Query: 830 QVR------------------------KAQKKVAEENLQKAVKVATETAEA-----AASN 860
           +++                        K  K V +E   ++ K A +T +      AA+ 
Sbjct: 785 KLKELGVQLGQLSISVIRKQELREHFNKIDKAVKDEVKSRSKKEAKQTLDEVKEYFAANE 844

Query: 861 GKPFCISRVEVGLDAAAVREAV 882
             P+ +  + +  +A A+ EA+
Sbjct: 845 SSPYFVKFINIPTNAKAITEAI 866


>gi|146421805|ref|XP_001486846.1| hypothetical protein PGUG_00223 [Meyerozyma guilliermondii ATCC
           6260]
 gi|146387967|gb|EDK36125.1| hypothetical protein PGUG_00223 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 964

 Score =  871 bits (2251), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 472/965 (48%), Positives = 620/965 (64%), Gaps = 57/965 (5%)

Query: 38  SRFSASAVAAMPGADPQVVEWPATKVRDTFFKFFEDKN-HVNWKSSPVVPVNDPTLLFAN 96
           SRF  +     P      + WPA+KVR TF  +F++K+ H    SS VVP NDPTLLFAN
Sbjct: 6   SRFKHNMSTNSP------IIWPASKVRSTFLDYFKEKHGHQFVPSSSVVPHNDPTLLFAN 59

Query: 97  AGMNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGN 156
           AGMNQYKPIFLGT DP +++S   RA N+QKCIRAGGKHNDL+DVG+D+YHHTFFEMLGN
Sbjct: 60  AGMNQYKPIFLGTVDPASEMSTWKRAVNSQKCIRAGGKHNDLEDVGQDSYHHTFFEMLGN 119

Query: 157 WSFGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWL-KFLPA 215
           WSFGDYFK EAIEWAWELLT VY+L  DRLY TYF GDEK GL PD EA+  WL + +  
Sbjct: 120 WSFGDYFKKEAIEWAWELLTDVYKLDPDRLYVTYFEGDEKLGLGPDLEAKQFWLDRGVAE 179

Query: 216 SRVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFN 275
             +L    KDNFWEMGD GPCGPCSEIHYDR GNR+AA LVN DDP  +EIWN+VF+Q+N
Sbjct: 180 DHILTGDAKDNFWEMGDQGPCGPCSEIHYDRIGNRNAAHLVNMDDPNVLEIWNLVFMQYN 239

Query: 276 RESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKV 335
           RE D SL+PLPAKH+DTGLGFERL SILQ K SNYDTDVF PIFD I++ +G RPY+GK 
Sbjct: 240 REPDSSLRPLPAKHIDTGLGFERLVSILQQKSSNYDTDVFQPIFDKIREISGVRPYTGKF 299

Query: 336 GADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQD 395
           G++D D +D AYRV+ADH+RTL+FAI DG  P NEGR YVLRRILRR  RY  + L    
Sbjct: 300 GSEDKDGIDTAYRVIADHVRTLTFAITDGGVPNNEGRGYVLRRILRRGARYVRKYLNCPI 359

Query: 396 G-FFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQD 451
           G FF  LV +V++   ++FPE+ +    ++EI+  EE SF KTL +G    E++   A  
Sbjct: 360 GSFFQQLVPVVIEQNSEIFPEILRNMQDLKEILNEEELSFAKTLDRGEKLFEQYAIIASK 419

Query: 452 VQGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQA 511
              + LSG+D + L+DTYGFP+DLT+LMA E GL +D EGF  A  E+ E S+++ NK +
Sbjct: 420 TPEQTLSGKDVWRLYDTYGFPVDLTRLMAAEAGLKIDEEGFEKARLESWEASKASSNKGS 479

Query: 512 GGAIVMDADATAALHKRG-VLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVP-GNEVG 569
              + +D  A + L     +  T+DS+K+    D K+ +  IY GS F++SV   G +VG
Sbjct: 480 SQLVKLDVHALSELDSNANIPKTNDSYKY-GLDDVKAEVVGIYDGSSFVDSVSEVGQQVG 538

Query: 570 IVLASSSFYAEQGGQIFDEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGE 627
           I+L  +SFYAEQGGQ +D+G   I+G    F V NVQ+YGG+V+H GS+  G     V +
Sbjct: 539 ILLDKTSFYAEQGGQEYDKGKIVIDG-SAEFEVDNVQVYGGYVLHTGSIVYGT--LKVKD 595

Query: 628 EVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDP 687
           EV+   D  RR  I  NHT TH+LNFALREVLGD VDQKGS+V PEKLRFDFSH + + P
Sbjct: 596 EVLACYDELRRWPIRNNHTGTHVLNFALREVLGDGVDQKGSLVAPEKLRFDFSHKQGLTP 655

Query: 688 EHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDL 747
             L ++E+I N+ I    +VF+K+  LA+A+ INGLRAVFGE YPDPVRVV++G  VEDL
Sbjct: 656 AELTKVEAISNKYISDNKEVFAKDVPLADAQQINGLRAVFGETYPDPVRVVSVGVPVEDL 715

Query: 748 LADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEA 807
           L DP+  EW  +S E CGGTH++ T E +   ++ E GIAKGIRRI AVT   A++  + 
Sbjct: 716 LKDPKRDEWHQVSVEFCGGTHVAKTGEIKDLVIIEESGIAKGIRRIVAVTGTEAHRVQKL 775

Query: 808 ACSLEKEVDDA--------------------SKIEGSLLEKNQVR----KAQKKVAEENL 843
           A   + ++ +A                     K+  S+L+K  +     K  K + ++  
Sbjct: 776 AKDYDSQLSEAEAMPFGSSKEQKTKELGVAIKKLSISVLDKQMLNTKFTKLDKSIKDQLK 835

Query: 844 QKAVKVATETAEA-----AASNGKPFCISRVEVGLDAAAVREAV-LKVIEQKGMPVMVFS 897
            K  + + +  EA      + +   + +S +++  +A A+ +A+ L   E     + +F+
Sbjct: 836 AKQKEESKKVLEAVNNWLTSEDSSDYFVSHIDISANAKAITDAINLIKKEHNSKTIYLFA 895

Query: 898 -TDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQV 956
            +D+  +   V      K   S  L        A   + G+ G GKG +  G G   + +
Sbjct: 896 GSDKVAHGCYVSDDAISKGVNSNDLA-----ALASTSIGGKAG-GKGNVVQGMGDKPSGI 949

Query: 957 TPAMD 961
             A++
Sbjct: 950 EKAVE 954


>gi|126305114|ref|XP_001362507.1| PREDICTED: alanyl-tRNA synthetase, cytoplasmic [Monodelphis
           domestica]
          Length = 968

 Score =  871 bits (2251), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 469/967 (48%), Positives = 608/967 (62%), Gaps = 65/967 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A+++R  F  FF+   H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP   ++KL
Sbjct: 7   ASEIRRRFIDFFKRNQHTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPAHPMAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A + A ELLT+ +
Sbjct: 67  NRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +P DRLY TYFGG+E AGL PD E + IW    L  S++LP   KDNFWEMGDTGPCGP
Sbjct: 127 GIPVDRLYVTYFGGNEAAGLEPDLECKQIWQNLGLDDSKILPGNMKDNFWEMGDTGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G+RDAA LVN DDP  +EIWN+VFIQFNRE+DGSLKPLP K +DTG+G ER
Sbjct: 187 CSEIHYDRIGDRDAAHLVNQDDPNVLEIWNLVFIQFNREADGSLKPLPKKSIDTGMGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+F+P F+AIQ+ TGAR Y+G VGADD D +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFVPYFEAIQKGTGARQYTGCVGADDVDGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY  E L A+ GFF  LV++VV+ +GD FPELK+
Sbjct: 307 VALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNAKRGFFATLVDVVVQSLGDAFPELKK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
               +++II  EE  F KTL +G     +  Q +   K + G  A++L+DTYGFP+DLT 
Sbjct: 367 DPEMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDCKTIPGDTAWLLYDTYGFPVDLTG 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
           L+AEE+GL+VD++GF      A+ +S   Q K AGG   I++D  A   L  +G+  TDD
Sbjct: 427 LIAEEKGLVVDMDGFEEERKLAQLKS---QGKGAGGEDHIMLDIYAIEELRIKGLQVTDD 483

Query: 536 SFKFIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           S K+ +         F++  + +KA+     F++ V  G E G+VL  + FYAEQGGQI+
Sbjct: 484 SLKYNYQSDSSGTYEFENPVATVKALRREKMFVDEVSTGQECGVVLDKTCFYAEQGGQIY 543

Query: 587 DEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           DEG++     S      F V++ Q+ GG+V+HIG++    G   VG+ V   +D  RR+ 
Sbjct: 544 DEGYLVKEDDSSEDKTEFTVKDAQVRGGYVLHIGTVY---GSLRVGDRVRLYIDEPRRRP 600

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           +  NHT TH+LNFALR VLG+  DQ+GS+V P++LRFDF+    +  + LR  E+I N  
Sbjct: 601 VMSNHTATHILNFALRSVLGE-ADQRGSLVAPDRLRFDFTAKGAMSTQQLRETETIANGM 659

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I A   V++++  LA AK I GLRAVF E YPDPVRVV+IG  V  LL DP        S
Sbjct: 660 IAAAKPVYAQDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGIPVAKLLDDPSGPAGSLTS 719

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDD-AS 819
            E CGGTHL N+  A A  ++SEE IAKGIRR+ AVT   A KA   A SL+  + +  +
Sbjct: 720 VEFCGGTHLQNSSHAGALVIVSEEAIAKGIRRVVAVTGVEAQKALRKADSLKSSLSELET 779

Query: 820 KIE----------------GSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASN--- 860
           K++                G LL    V + QK    ENL+   KV  +   A  ++   
Sbjct: 780 KVKAQTAPNKDIQREISDFGELLATTVVPQWQKDELRENLKALKKVMDDLDRANKADVQK 839

Query: 861 --------------GKPFCISRVEVGLDAAAVREAVLKVIEQKG--MPVMVFSTDETTNK 904
                          +P  I  +E G  A A+ EA LK+ +        M+F+ D   NK
Sbjct: 840 RVLEKTRQLIESHPNQPLVIMEMESGASAKALNEA-LKLFKTHSPETSAMLFTVDSEANK 898

Query: 905 AVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAA 964
            +    VP+ +  +K L+ SEW+      + G+ G GK   A   G +   +  A+ LA 
Sbjct: 899 IICLCQVPQNA-ANKGLKASEWVQQVSGLMDGK-GGGKDVSAQATGKNVGCLQEALSLAT 956

Query: 965 EFAAMKL 971
            FA ++L
Sbjct: 957 SFAHLRL 963


>gi|189217804|ref|NP_001121342.1| alanyl-tRNA synthetase [Xenopus laevis]
 gi|171846704|gb|AAI61712.1| LOC100158432 protein [Xenopus laevis]
          Length = 968

 Score =  871 bits (2251), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 466/967 (48%), Positives = 610/967 (63%), Gaps = 65/967 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A+++R  F  FF+D  H    SS  VP++DPTLLFANAGMNQ+KPIFL T DP+  ++KL
Sbjct: 7   ASEIRQKFIDFFKDNGHTYVHSSATVPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           TRA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A + A +LLTK +
Sbjct: 67  TRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKLALDLLTKEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +  +RLY TYFGG+E AGL PD E + IWL   L  SR+LP   KDNFWEMGDTGPCGP
Sbjct: 127 GIDIERLYVTYFGGNEAAGLEPDLECKQIWLNLGLAESRILPGSMKDNFWEMGDTGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIH+DR G RDAA LVN DDP  +EIWN+VFIQFNRE+DG+LKPLP K +DTG+G ER
Sbjct: 187 CSEIHFDRIGGRDAAHLVNMDDPNVLEIWNLVFIQFNRETDGTLKPLPKKSIDTGMGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+F+P F+AIQ+ TGARPY+GKVG +D D +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGDEDVDGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY  E L A  GFF+ LV++VV+ +G+ FPELK+
Sbjct: 307 VALADGGRPDNTGRGYVLRRILRRAVRYAHEKLNASKGFFSTLVDVVVQSLGNAFPELKK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
               +++II  EE  F KTL +G     +  Q + + KV+ G  A++L+DTYGFP+DLT 
Sbjct: 367 DPDMVKDIINDEETQFLKTLNRGRRILDRKIQSLGEHKVIPGDTAWLLYDTYGFPVDLTS 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
           L+AEERGL +D+E F      A+ +S   Q K AG    +++D  A   L  RG+  TDD
Sbjct: 427 LIAEERGLTLDMESFEEERKAAQLKS---QGKGAGDEDLLMLDIYAIEELRSRGLEPTDD 483

Query: 536 SFKFIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
             K+ +         F +  + +KAI     F+E    G E G+VL  + FYAEQGGQ +
Sbjct: 484 LPKYTYTSNAEGVYEFDNLLATVKAIRREKMFVEEASTGQECGLVLDKTCFYAEQGGQTY 543

Query: 587 DEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           DEG++     S      F VRN Q+ GG+V+H+G+L    G   VG++V   +D  +R+ 
Sbjct: 544 DEGYMVKEEESSEDKTEFTVRNTQVRGGYVLHVGTLY---GNLKVGDQVHLYIDEPKRRP 600

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           I  NHT TH+LNFALR VLG+  DQ+GS+V P++LRFDF+    +  + +R+ E I N+ 
Sbjct: 601 IMSNHTATHILNFALRSVLGE-ADQRGSLVAPDRLRFDFTAKGAMTTQEIRKTEEIANDI 659

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           IK    V++ +  LA AK I GLRAVF E YPDPVRVV+IG  VEDLLADP +      S
Sbjct: 660 IKENKVVYALDCPLATAKAIQGLRAVFDETYPDPVRVVSIGIPVEDLLADPSSPAGSVTS 719

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFE-------AACSLEK 813
            E CGGTHL N+  A  F +++EE IAKGIRRI AVT   A KA         +   LEK
Sbjct: 720 VEFCGGTHLKNSGHAGPFIIVTEEAIAKGIRRIVAVTGAEAQKALRRQDAIKVSLSDLEK 779

Query: 814 EV----DDASKIEGSLLEKNQ------VRKAQKKVAEENLQKAVKVATETAEAAASN--- 860
           +V    D    ++  + + ++      + + QK V  E L+   K   +   A+ ++   
Sbjct: 780 KVKKQTDPNKDVQKEIADLSENLATVVIAQWQKDVLREQLKTLKKTMDDLDRASKADVQK 839

Query: 861 --------------GKPFCISRVEVGLDAAAVREAVLKVIEQKG--MPVMVFSTDETTNK 904
                          +P  +  +E G  A A+ E+ LK+++ +      M+FS D    K
Sbjct: 840 RVLEITKQLIEEHPNQPLLVLEMENGASAKALNES-LKLLKSQSPQTAAMIFSVDSDAGK 898

Query: 905 AVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAA 964
                 VP K    K L+ +EW+    + + G+ G GK   A   G +   ++  + LA 
Sbjct: 899 ITCLCQVP-KETADKGLKANEWVQQVSELMDGK-GGGKDTSAQATGKNVGCLSQVLKLAE 956

Query: 965 EFAAMKL 971
           +F  MKL
Sbjct: 957 DFGKMKL 963


>gi|384945526|gb|AFI36368.1| alanyl-tRNA synthetase, cytoplasmic [Macaca mulatta]
          Length = 968

 Score =  871 bits (2251), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 468/967 (48%), Positives = 617/967 (63%), Gaps = 65/967 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A+++R  F  FF+   H    SS  +P++DPTLLFANAGMNQ+KPIFL T  P+  ++KL
Sbjct: 7   ASEIRQRFIDFFKRNEHTYIHSSATIPLDDPTLLFANAGMNQFKPIFLNTIAPSHPMAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A + A ELLT+ +
Sbjct: 67  SRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +P  RLY TYFGGDE AGL PD E + IW    L  +++LP   KDNFWEMGDTGPCGP
Sbjct: 127 GIPIGRLYVTYFGGDEAAGLEPDLECKQIWQNLGLDDTKILPGNMKDNFWEMGDTGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G RDAA LVN DDP  +EIWN+VFIQ+NRE+DG LKPLP K +DTG+G ER
Sbjct: 187 CSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNREADGILKPLPKKSIDTGMGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+F+P F+AIQ+ TGARPY+GKVGA+DAD +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY  E L A  GFF  LV++VV+ +GD FPELK+
Sbjct: 307 VALADGGRPDNTGRGYVLRRILRRAVRYAHEKLNASRGFFATLVDVVVQSLGDAFPELKK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
               +++I+  EE  F KTL +G     +  Q +   K + G  A++L+DTYGFP+DLT 
Sbjct: 367 DPDMVKDIVNEEEVQFLKTLSRGRRILDRKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTG 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
           L+AEE+GL+VD++GF      A+ +S   Q K AGG   I++D  A   L  RG+  TDD
Sbjct: 427 LIAEEKGLVVDMDGFEEERKLAQLKS---QGKGAGGEDLIMLDIYAIEELRARGLEVTDD 483

Query: 536 SFKFIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           S K+ +         F++  + + A+     F+E V  G E G+VL  + FYAEQGGQI+
Sbjct: 484 SPKYNYHLDFSGSYVFENTVATVMALRREKMFVEEVSTGQECGVVLDKTCFYAEQGGQIY 543

Query: 587 DEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           DEG++  +  S      F V+N Q+ GG+V+HIG++    G   VG++V   +D  RR+ 
Sbjct: 544 DEGYLVKVDDSSEDKTEFTVKNAQVRGGYVLHIGTIY---GDLKVGDQVRLFIDEPRRRP 600

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           I  NHT TH+LNFALR VLG+  DQKGS+V P++LRFDF+    +  + +++ E I NE 
Sbjct: 601 IMSNHTATHILNFALRSVLGE-ADQKGSLVAPDRLRFDFTAKGAMSTQQIKKAEEIANEM 659

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I+A   V++++  LA AK I GLRAVF E YPDPVRVV+IG  V +LL DP        S
Sbjct: 660 IEAAKPVYTQDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTS 719

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEK------- 813
            E CGGTHL N+  A AF +++EE IAKGIRRI AVT   A KA   A SL+K       
Sbjct: 720 VEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKAESLKKSLSVMEA 779

Query: 814 --------------EVDDASKIEGSLL----EKNQVRKAQKKVAE--ENLQKAVK----- 848
                         E+ D  +   + +    +K+++R+  K + +  ++L +A K     
Sbjct: 780 KVKAQTAPNKDVQREIADLGEALATAVIPQWQKDELRETLKSLKKVMDDLDRASKADVQK 839

Query: 849 -VATETAEAAASN-GKPFCISRVEVGLDAAAVREAVLKVIEQKG--MPVMVFSTDETTNK 904
            V  +T +   SN  +P  I  +E G  A A+ EA LK+ +        M+F+ D    K
Sbjct: 840 RVLEKTKQLIDSNPNQPLVILEMESGASAKALNEA-LKLFKTHSPQTSAMLFTVDNEAGK 898

Query: 905 AVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAA 964
                 VP+ +  ++ L+ SEW+      + G+ G GK   A   G +   +  A+ LA 
Sbjct: 899 ITCLCQVPQNA-ANRGLKASEWVQQVSGLMDGK-GGGKDVSAQATGKNIGCLQEALQLAT 956

Query: 965 EFAAMKL 971
            FA ++L
Sbjct: 957 SFAQLRL 963


>gi|57524852|ref|NP_001005836.1| alanyl-tRNA synthetase, cytoplasmic [Gallus gallus]
 gi|53131091|emb|CAG31790.1| hypothetical protein RCJMB04_11d4 [Gallus gallus]
          Length = 913

 Score =  871 bits (2250), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 457/910 (50%), Positives = 594/910 (65%), Gaps = 63/910 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A+++R  F  FF++  H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  L+KL
Sbjct: 7   ASQIRQRFIDFFKENQHTYVHSSSTIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPLAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A + A +LLTK +
Sbjct: 67  SRATNTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKLALDLLTKEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +PA+RLY TYFGG+E AGL PD E + IWL   L   R+LP   KDNFWEMGDTGPCGP
Sbjct: 127 GIPAERLYVTYFGGNEAAGLQPDLECKQIWLDLGLAEGRILPGNMKDNFWEMGDTGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G+RDA+ LVN DDP  +EIWN+VFIQFNRE+DGSLKPLP K +DTG+G ER
Sbjct: 187 CSEIHYDRIGDRDASHLVNQDDPNVLEIWNLVFIQFNREADGSLKPLPKKSIDTGMGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+F+P F+AIQ+ TGARPY G+VGA+DAD +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFLPYFEAIQKGTGARPYMGQVGAEDADGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A++DG  P N GR YVLRRILRRAVRY  E L A  GFF  LV++VV+ +GD FPELK+
Sbjct: 307 LALSDGGRPDNTGRGYVLRRILRRAVRYSHEKLNAPKGFFATLVDVVVQSLGDAFPELKK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
               +++II  EE  F KTL +G     +  Q +   K + G  A++L+DTYGFP+DLT 
Sbjct: 367 DPDMVKDIINEEEDQFLKTLSRGRRILDRKIQSMGDSKTIPGDTAWLLYDTYGFPVDLTG 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
           L+AEE+GL+VD+EGF      A+ +S   Q K AGG   +++D  A   L  RG+  TDD
Sbjct: 427 LIAEEKGLVVDMEGFEEERKNAQLKS---QGKGAGGEDLLMLDIYAIEELRARGLEVTDD 483

Query: 536 SFKFIWFQDHK---------SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           S K+ +  D           + +KAI    +F+E V  G E GIVL  + FYAEQGGQI+
Sbjct: 484 SPKYGYTSDPSGTYDFGSLVATVKAIRREKKFVEEVSTGQECGIVLDRTCFYAEQGGQIY 543

Query: 587 DEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           D+G++     S      F V+NVQ+ GG+V+HIG+L    G   VG++V   +D  RR+ 
Sbjct: 544 DQGYMVKDDDSKEDKTEFTVKNVQVRGGYVLHIGTLY---GSLKVGDQVHLSIDETRRRP 600

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           +  NHT TH+LNFALR VLG+  DQ+GS+V P++LRFDF+    +  + ++++E I N+ 
Sbjct: 601 VMSNHTATHILNFALRSVLGE-ADQRGSLVAPDRLRFDFTAKGALSTQEIKKVEGIANQM 659

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I+    V++++  LA AK I GLRAVF E YPDPVRVV+IG  VE+LLADP        S
Sbjct: 660 IEEAKPVYARDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGIPVEELLADPSGPAGSITS 719

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSL--------- 811
            E CGGTHL N+  A  F ++SEE IAKGIRRI AVT   A KA     SL         
Sbjct: 720 IEFCGGTHLQNSGHAGPFVIVSEEAIAKGIRRIVAVTGAEARKALRKVESLKKVLSALDA 779

Query: 812 ------------EKEVDDASKIEGSLL----EKNQVR---KAQKKVAEE-------NLQK 845
                       +KE+ D S++  + +    +K+++R   KA KKV ++       ++QK
Sbjct: 780 KVKVQTAPNKDVQKEITDLSEMLATAVIPQWQKDELREAVKALKKVMDDLDRASKADIQK 839

Query: 846 AVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAV-LKVIEQKGMPVMVFSTDETTNK 904
            V   T+    +  N +P  I  +E G  A A+ E++ L          M+F+ D    +
Sbjct: 840 RVLEKTKQVIESHPN-QPLVIMEMENGASAKALNESLKLFKTHSPQTATMLFAVDNEAGR 898

Query: 905 AVVCAGVPEK 914
                 VP +
Sbjct: 899 ITCLCQVPRR 908


>gi|73957022|ref|XP_536788.2| PREDICTED: alanyl-tRNA synthetase, cytoplasmic isoform 1 [Canis
           lupus familiaris]
          Length = 968

 Score =  870 bits (2249), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 468/968 (48%), Positives = 619/968 (63%), Gaps = 67/968 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A+++R  F  FF+   H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  ++KL
Sbjct: 7   ASEIRQRFIDFFKRNEHTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A + A ELLT+ +
Sbjct: 67  SRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +P +RLY TYFGGDE AGL PD E + IW    L  +++LP   KDNFWEMGDTGPCGP
Sbjct: 127 GIPVERLYVTYFGGDEAAGLEPDLECKQIWQNLGLDDTKILPGNMKDNFWEMGDTGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G RDAA LVN DDP  +EIWN+VFIQ+NRESDG LKPLP K +DTG+G ER
Sbjct: 187 CSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNRESDGILKPLPKKSIDTGMGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+F+P F+AIQ+ TGARPY+GKVGADDAD +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGADDADGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY  E L A  GFF  LV++VV+ +GD FPELK+
Sbjct: 307 VALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRGFFATLVDVVVQSLGDAFPELKK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
               +++II  EE  F KTL +G     +  Q +     + G  A++L+DTYGFP+DLT 
Sbjct: 367 DPDMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDCNTIPGDTAWLLYDTYGFPVDLTG 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
           L+AEE+G++VD++GF      A+ +S   Q K AGG   I++D  A   L ++G+ AT+D
Sbjct: 427 LIAEEKGMVVDMDGFEEERKLAQLKS---QGKGAGGEDLIMLDIYAIEELREKGLEATED 483

Query: 536 SFKFIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           S K+ +         F++  + + A+     F+E V  G E G+VL  + FYAEQGGQI+
Sbjct: 484 SPKYNYHSDSSGSYTFENVVATVVALRRDKMFVEEVSTGQECGVVLDKTCFYAEQGGQIY 543

Query: 587 DEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           DEG++  +  +      F V+N Q+ GG+V+HIG++    G   VG++V   +D  RR+ 
Sbjct: 544 DEGYLVKVEDNSEDKMEFTVKNAQVRGGYVLHIGTIY---GSLRVGDQVRLFIDEPRRRP 600

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           I  NHT TH+LNFALR VLG+  DQKGS+V P++LRFDF+    +  + +++ E I N  
Sbjct: 601 IMSNHTATHILNFALRSVLGE-ADQKGSLVAPDRLRFDFTAKGAMSTQQIKKAEEIANGM 659

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I+A   V++++  LA AK I GLRAVF E YPDPVRVV+IG  V +LL DP        S
Sbjct: 660 IEAAKPVYTQDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLEDPSGPAGSLTS 719

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSL--------- 811
            E CGGTHL N+  A AF ++SEE IAKGIRRI AVT   A KA   A SL         
Sbjct: 720 VEFCGGTHLQNSSHAGAFVIVSEEAIAKGIRRIVAVTGAEAQKALRKAESLKNSLSVMEA 779

Query: 812 ------------EKEVDDASKIEGSLL----EKNQVR---KAQKKVAEENLQKAVK---- 848
                       ++E+ D  ++  + +    +K++ R   K+ KK+  ++L +A K    
Sbjct: 780 KVKAQTAPNKDVQREIADLGEVLATAVIPQWQKDEFRENLKSLKKIM-DDLDRASKADVQ 838

Query: 849 --VATETAEAAASN-GKPFCISRVEVGLDAAAVREAVLKVIEQKG--MPVMVFSTDETTN 903
             V  +T +   SN  +P  I  +E G  A A+ EA LK+ +        M+F+ D    
Sbjct: 839 KRVLEKTKQLIDSNPNQPLVILEMESGASAKALNEA-LKLFKTHSPETSAMLFTVDNEAG 897

Query: 904 KAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLA 963
           +      VP+ +  ++ L+ SEW+      + G+ G GK   A   G +   +  A+ LA
Sbjct: 898 RITCLCQVPQNA-ANRGLKASEWVQQVSGLMDGK-GGGKDVSAQATGKNVGCLQEALQLA 955

Query: 964 AEFAAMKL 971
             FA + L
Sbjct: 956 TSFAQLHL 963


>gi|58268868|ref|XP_571590.1| alanine-tRNA ligase [Cryptococcus neoformans var. neoformans JEC21]
 gi|134113024|ref|XP_774788.1| hypothetical protein CNBF2180 [Cryptococcus neoformans var.
            neoformans B-3501A]
 gi|50257434|gb|EAL20141.1| hypothetical protein CNBF2180 [Cryptococcus neoformans var.
            neoformans B-3501A]
 gi|57227825|gb|AAW44283.1| alanine-tRNA ligase, putative [Cryptococcus neoformans var.
            neoformans JEC21]
          Length = 1012

 Score =  870 bits (2248), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 483/997 (48%), Positives = 627/997 (62%), Gaps = 50/997 (5%)

Query: 10   TASFVATARVLLNPSLTLAVTNHHHSLISRFSASAVAAMPGADPQVVEWPATKVRDTFFK 69
            T+ F    R+L   S T++  +    +      +     P A P   +WPA KVR TF  
Sbjct: 12   TSHFKFAPRLLSKTSFTVSAQSSSKKMGVNDKPTIPTTAPHAWPSPEDWPAAKVRQTFID 71

Query: 70   FFEDK---NHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRACNTQ 126
            +F ++    H  W SS VVP +D TLLFANAGMNQYKP+FLGTADP ++LSKL RA N+Q
Sbjct: 72   YFVNQPGFEHTFWPSSGVVPFDDDTLLFANAGMNQYKPLFLGTADPKSELSKLIRAANSQ 131

Query: 127  KCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLPADRL 186
            KCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK  A+  AW+LLT+VY LP DRL
Sbjct: 132  KCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKVGALTMAWDLLTRVYGLPKDRL 191

Query: 187  YATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGPCSEIHYD 245
            Y TYF GD K GL PD+EA+ IW    +P S +LP   KDNFWEMG TGPCGPCSEIH+D
Sbjct: 192  YVTYFEGDAKQGLEPDSEAQQIWRDLGVPESHILPGNAKDNFWEMGATGPCGPCSEIHFD 251

Query: 246  RTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQN 305
            R G RDAA LVN DDP  +EIWN VFIQ+NRE  G L+ LPAKHVDTG+GFERL S+L N
Sbjct: 252  RIGGRDAAHLVNADDPNVLEIWNNVFIQYNREPSGELRTLPAKHVDTGMGFERLVSVLHN 311

Query: 306  KMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGS 365
              SNYDTDVF PIF  IQ+ TGARPY GK+G +D D +D AYRV+ADHIRTL+ AI+DG 
Sbjct: 312  VSSNYDTDVFTPIFSKIQELTGARPYEGKLGDEDKDGIDTAYRVIADHIRTLTIAISDGG 371

Query: 366  CPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFPELKQREAHIR 424
             P  +GR YVLRR+LRR VRY S     + G FF+ LV  VV+ +G +FPE+ ++   + 
Sbjct: 372  IPDKDGRGYVLRRVLRRGVRYASNKFGVKIGTFFSSLVPTVVESLGPIFPEVTKKIPELT 431

Query: 425  EIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQLMAE 481
            EI+  EEASF +TL +G     K+   A D +  VLSG+D + L+DTYGFP+DLTQ+MAE
Sbjct: 432  EILNEEEASFARTLNRGEALFNKYATTAIDEKRTVLSGKDIWRLYDTYGFPVDLTQIMAE 491

Query: 482  ERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR-GVLATDDSFKFI 540
            ERGL +D E F  A  E+ E S++   ++AG  + +D    AAL     V  TDDSFK+ 
Sbjct: 492  ERGLKIDQEAFEKARLESLEASKAGGKEKAGALVKLDVHDLAALEANDAVPKTDDSFKY- 550

Query: 541  WFQDHKSVIKAIYTGSEFIES---VVPGNEVGIVLASSSFYAEQGGQIFDEGF--IEGLF 595
               D K+ +K+IY GS+F+ S   + P    GI+L  ++FYAE GGQ +D G   I+G  
Sbjct: 551  HLDDIKANVKSIYHGSKFLNSTSELPPNTTFGILLDRTNFYAESGGQEYDTGVIAIDGK- 609

Query: 596  GSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFAL 655
              F V +VQ+Y G+V+HIG + E  G   +G+EVIC  D  RR  I  NHT TH+LNFAL
Sbjct: 610  AEFKVEDVQVYNGYVLHIGRMEE--GDIEIGDEVICTYDELRRWPIRNNHTGTHILNFAL 667

Query: 656  REVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLA 715
            REVLGDH+DQKGS+V P KLRFDFSHGK +    L +IE I N+ IK  + V++K+  LA
Sbjct: 668  REVLGDHIDQKGSLVAPTKLRFDFSHGKSIAVPELIKIEGICNDWIKRGVPVYAKDMPLA 727

Query: 716  EAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREA 775
            EA  I GLRAVFGE YPDPVRVV++G  +ED+  + E+ +W   S E CGGTH++ T + 
Sbjct: 728  EAYKIPGLRAVFGEAYPDPVRVVSLGYPLEDIAKNVEDSKWRQTSIEFCGGTHVAKTDDI 787

Query: 776  EAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEG------------ 823
            + F ++ E  IAKGIRRI AVT   A+         E+++    +++G            
Sbjct: 788  KDFVIIEESSIAKGIRRIVAVTGHDAHDVSRKGVEFERKLQRIKELQGKEKEVAMKPFLV 847

Query: 824  -------SLLEKNQVRKAQKKVAEE----------NLQKAVKVATETAEAAASNGKPFCI 866
                   SL++KN +++  +K+  E             K +  A +T      N   F  
Sbjct: 848  ELGQSGISLIKKNSLKEQFEKIQGELVAAAKAKVAADSKIISEAIKTYFQENPNENVFAG 907

Query: 867  SRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEW 926
            S  +VG ++  +  AV    +     V  FS D  T K      +P+   +SK L+   W
Sbjct: 908  S-FDVGGNSKTLTAAV-AAGKSASKAVYAFSADPETGKVAHVNYLPKPILESKALDAKIW 965

Query: 927  LTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLA 963
            L    + + G+ G G+   A+G G++ +++  A+ +A
Sbjct: 966  LNEVAKVIGGKGG-GRDDSAAGVGSEISKIDEAIVVA 1001


>gi|344300271|gb|EGW30611.1| alanyl-tRNA synthetase, cytoplasmic [Spathaspora passalidarum NRRL
           Y-27907]
          Length = 959

 Score =  870 bits (2248), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 432/775 (55%), Positives = 543/775 (70%), Gaps = 14/775 (1%)

Query: 57  EWPATKVRDTFFKFF-EDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQ 115
           EW A+KVR TF  FF + K H    SS VVP NDPTLLFANAGMNQYKPIFLGT DP + 
Sbjct: 13  EWTASKVRSTFLDFFTKKKGHTYVPSSSVVPHNDPTLLFANAGMNQYKPIFLGTVDPASD 72

Query: 116 LSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELL 175
            + L RA N+QKCIRAGGKHNDL+DVG+D+YHHTFFEMLGNWSFGDYFK EAI+W+WELL
Sbjct: 73  FASLKRAANSQKCIRAGGKHNDLEDVGRDSYHHTFFEMLGNWSFGDYFKKEAIDWSWELL 132

Query: 176 TKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTG 234
           T+VY L  DRLY TYFGGDEK GL PD EA+  WL   +    +LP   KDNFWEMGD G
Sbjct: 133 TQVYGLDKDRLYVTYFGGDEKQGLQPDLEAKQFWLNVGVAEDHILPGSAKDNFWEMGDQG 192

Query: 235 PCGPCSEIHYDRT-GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTG 293
           PCGPCSEIHYDR  G R+AA LVN DDP  +E+WN+VFIQ+NRE D SL+ LP KH+DTG
Sbjct: 193 PCGPCSEIHYDRIGGGRNAADLVNMDDPNVLEVWNVVFIQYNREPDSSLRTLPNKHIDTG 252

Query: 294 LGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADH 353
           +GFERL SILQ+K SNYDTDVF PIFD I Q TG RPY+G+ GA+D D +D AYRV+ADH
Sbjct: 253 MGFERLVSILQDKSSNYDTDVFGPIFDKITQITGVRPYAGRFGAEDKDGIDTAYRVIADH 312

Query: 354 IRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDV 412
           +RTL+FAI DG  P NEGR YVLRRILRR  RY  + +    G FF  LV++V++   ++
Sbjct: 313 VRTLTFAICDGGVPNNEGRGYVLRRILRRGSRYVRKYMNYPIGSFFQQLVDVVIEQNKEI 372

Query: 413 FPELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTY 469
           FPE+    + ++EI+  EE SF KTL +G    E++   A     + LSG+D + L+DTY
Sbjct: 373 FPEIVHGASDLKEILNEEEVSFAKTLDRGEKLFEQYAIIASKTPEQTLSGKDVWRLYDTY 432

Query: 470 GFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRG 529
           GFP+DLT+LMAEE GL +D  GF  A +E+RE S+    K     I +D  A ++L    
Sbjct: 433 GFPVDLTRLMAEEAGLKIDEPGFERAKEESREASKGTGTKNGTTLIKLDVHALSSLETEL 492

Query: 530 VLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGN-EVGIVLASSSFYAEQGGQIFDE 588
           V  TDD +K+   ++ ++ I +IY G+EF+  +     + GI+L  + FYAEQGGQ +D 
Sbjct: 493 VPKTDDEYKY-GTENIEAKIVSIYDGAEFVTKINDSTKQYGILLDKTPFYAEQGGQEYDT 551

Query: 589 G--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
           G   I+G    F V NVQ+YGG+V+H G++TE  G  SVG+ +I   D  RR  I  NHT
Sbjct: 552 GKLVIDGK-SEFTVDNVQVYGGYVLHTGTITE--GELSVGDSIIASYDELRRWPIRNNHT 608

Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD 706
            TH+LN+ALREVLGD VDQKGS+V PEKLRFDFSH + +    L ++E+I N+ IK    
Sbjct: 609 GTHVLNYALREVLGDSVDQKGSLVAPEKLRFDFSHKQALSTAELEKVEAISNKYIKDNKT 668

Query: 707 VFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGG 766
           V+ ++ +L++A+ INGLRAVFGE YPDPVRVV+IG  V+ LL++P+N EW  +S E CGG
Sbjct: 669 VYYQDVSLSQAREINGLRAVFGETYPDPVRVVSIGVPVDTLLSNPKNPEWHEVSIEFCGG 728

Query: 767 THLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKI 821
           TH+  T E +   ++ E GIAKGIRRI AVT   A      A   ++E+D A K+
Sbjct: 729 THVGETGEIKDLVVIEESGIAKGIRRIVAVTGHDARNVQRLASEFDQELDLADKL 783


>gi|410254294|gb|JAA15114.1| alanyl-tRNA synthetase [Pan troglodytes]
          Length = 968

 Score =  870 bits (2247), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 466/966 (48%), Positives = 616/966 (63%), Gaps = 63/966 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A+++R  F  FF+   H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  ++KL
Sbjct: 7   ASEIRQRFIDFFKRNEHTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A +   ELLT+ +
Sbjct: 67  SRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMGLELLTQEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +P +RLY TYFGGDE AGL  D E + IW    L  +++LP   KDNFWEMGDTGPCGP
Sbjct: 127 GIPIERLYVTYFGGDEAAGLEADLECKQIWQNLGLDDTKILPGNMKDNFWEMGDTGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G RDAA LVN DDP  +EIWN+VFIQ+NRE+DG LKPLP K +DTG+G ER
Sbjct: 187 CSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNREADGILKPLPKKSIDTGMGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+F+P F+AIQ+ TGARPY+GKVGA+DAD +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY  E L A  GFF  LV++VV+ +GD FPELK+
Sbjct: 307 VALADGGRPDNTGRGYVLRRILRRAVRYAHEKLNAIRGFFATLVDVVVQSLGDAFPELKK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
               +++II  EE  F KTL +G     +  Q +   K + G  A++L+DTYGFP+DLT 
Sbjct: 367 DPDMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTG 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
           L+AEE+GL+VD++GF      A+ +S   Q K AGG   I++D  A   L  RG+  TDD
Sbjct: 427 LIAEEKGLVVDMDGFEEERKLAQLKS---QGKGAGGEDLIMLDIYAIEELRARGLEVTDD 483

Query: 536 SFKFIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           S K+ +         F++  + + A+     F+E V  G E G+VL  + FYAEQGGQI+
Sbjct: 484 SPKYNYHLDSSGSYVFENTVATVMALRREKMFVEEVSTGQECGVVLDKTCFYAEQGGQIY 543

Query: 587 DEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           DEG++  +  S      F V+N Q+ GG+V+HIG++    G   VG++V   +D  RR+ 
Sbjct: 544 DEGYLVKVDDSSEDKTEFTVKNAQVRGGYVLHIGTIY---GDLKVGDQVWLFIDEPRRRP 600

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           I  NHT TH+LNFALR VLG+  DQKGS+V P++LRFDF+    +  + +++ E I NE 
Sbjct: 601 IMSNHTATHILNFALRSVLGE-ADQKGSLVAPDRLRFDFTAKGAMSTQQIKKAEEIANEM 659

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I+A   V++++  LA AK I GLRAVF E YPDPVRVV+IG  V +LL DP        S
Sbjct: 660 IEAAKAVYTQDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTS 719

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEK------- 813
            E CGGTHL N+  A AF +++EE IAKGIRRI AVT   A KA   A S++K       
Sbjct: 720 VEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKAESMKKCLSVMEA 779

Query: 814 --------------EVDDASKIEGSLL----EKNQVRKAQKKVAE--ENLQKAVK----- 848
                         E+ D  +   + +    +K+++R+  K + +  ++L +A K     
Sbjct: 780 KVKAQTAPNKDVQREIADLGEALATAVIPQWQKDELRETLKSLKKVMDDLDRASKADVQK 839

Query: 849 -VATETAEAAASN-GKPFCISRVEVGLDAAAVREAV-LKVIEQKGMPVMVFSTDETTNKA 905
            V  +T +   SN  +P  I  +E G  A A+ EA+ L  +       M+F+ D    K 
Sbjct: 840 RVLEKTKQFIDSNPNQPLVILEMESGASAKALNEALKLFKMHSPQTSAMLFTVDNEAGKI 899

Query: 906 VVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAE 965
                VP+ +  ++ L+ SEW+      + G+ G GK   A   G +   +  A+ LA  
Sbjct: 900 TCLCQVPQNA-ANRGLKASEWVQQVSGLMDGK-GGGKDVSAQATGKNVGCLQEALQLATS 957

Query: 966 FAAMKL 971
           FA ++L
Sbjct: 958 FAQLRL 963


>gi|301604154|ref|XP_002931707.1| PREDICTED: alanyl-tRNA synthetase, cytoplasmic-like [Xenopus
           (Silurana) tropicalis]
          Length = 968

 Score =  870 bits (2247), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 466/967 (48%), Positives = 609/967 (62%), Gaps = 65/967 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A+++R  F  FF++  H    SS  VP++DPTLLFANAGMNQ+KPIFL T DP+  ++KL
Sbjct: 7   ASEIRQKFIDFFKENAHTYVHSSATVPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A + A +LLTK +
Sbjct: 67  NRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKLALDLLTKEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +  +RLY TYFGG+E AGL PD E + IWL   LP SR+LP   KDNFWEMGDTGPCGP
Sbjct: 127 GIDIERLYVTYFGGNEAAGLEPDLECKQIWLNLGLPESRILPGSMKDNFWEMGDTGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIH+DR G RDAA LVN DDP  +EIWN+VFIQFNRE+DG+LKPLP K +DTG+G ER
Sbjct: 187 CSEIHFDRIGGRDAAHLVNMDDPNVLEIWNLVFIQFNRETDGTLKPLPKKSIDTGMGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+F+P F+AI++ TGARPY+GKVGA+D D +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFVPYFEAIEKGTGARPYTGKVGAEDVDGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY  E L A  GFF  LV++VV+ +G+ FPELK+
Sbjct: 307 VALADGGRPDNTGRGYVLRRILRRAVRYAHEKLNASKGFFATLVDVVVQSLGNAFPELKK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
               +++II  EE  F KTL +G     +    + + KV+ G  A++L+DTYGFP+DLT 
Sbjct: 367 DPDMVKDIINEEETQFLKTLNRGRRILDRKINSLGEHKVIPGDTAWLLYDTYGFPVDLTS 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
           L+AEERGL +D+E F      A+ +S   Q K  G    +++D  A   L  +G+  TDD
Sbjct: 427 LIAEERGLTLDLESFEEERKAAQLKS---QGKGTGDEDLLMLDIYAIEELRSQGLEPTDD 483

Query: 536 SFKFIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
             K+ +         F+   + +KAI     F+E    G E G+VL  + FYAEQGGQ +
Sbjct: 484 LPKYKYTSNADGVYEFESLIATVKAIRRDKMFVEEASTGQECGLVLDKTCFYAEQGGQTY 543

Query: 587 DEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           DEG++     S      F VRN Q+ GG+V+H+G+L    G   VG++V   VD  +R+ 
Sbjct: 544 DEGYMVKEEESSEDKTEFTVRNTQVRGGYVLHMGTLY---GHLKVGDQVCLYVDEPKRRP 600

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           I  NHT TH+LNFALR VLG+  DQ+GS+V P++LRFDF+    +  + +R+ E I N+ 
Sbjct: 601 IMSNHTATHILNFALRSVLGE-ADQRGSLVAPDRLRFDFTAKGAMSTQEIRKTEEIANDI 659

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           IK    V++ + +LAEAK I GLRAVF E YPDPVRVV+IG  VEDLLADP +      S
Sbjct: 660 IKENKVVYALDCSLAEAKAIQGLRAVFDETYPDPVRVVSIGIPVEDLLADPSSPAGSITS 719

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK 820
            E CGGTHL N+  A  F +++EE IAKGIRRI AVT   A KA     +L+  + D  K
Sbjct: 720 VEFCGGTHLQNSGHAGPFIIVTEEAIAKGIRRIVAVTGAEAQKALRRQDALKVNLSDLEK 779

Query: 821 I-------------EGSLLEKN----QVRKAQKKVAEENLQKAVKVATETAEAAASN--- 860
                         E + L +N     + + QK V  E L+   K   +   A+ ++   
Sbjct: 780 KVKKQNSPNKDVQKEIADLSENLATASIAQWQKDVLREQLKTLKKTMDDLDRASKADVQK 839

Query: 861 --------------GKPFCISRVEVGLDAAAVREAVLKVIEQKG--MPVMVFSTDETTNK 904
                          +P  +  +E G  A A+ E+ LK+++ +      M+FS D    K
Sbjct: 840 RVLEITKQLIEEHPNQPLLVLEMENGASAKALNES-LKLLKSQSPHTAAMIFSVDNDAGK 898

Query: 905 AVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAA 964
                 VP+ +   K L+ +EW+      + GR G GK   A   G +   ++  + LA 
Sbjct: 899 ITCLCQVPQDT-ADKGLKANEWVQQVSDLMDGR-GGGKDTSAQATGKNVGCLSQVLKLAE 956

Query: 965 EFAAMKL 971
           +FA MKL
Sbjct: 957 DFAKMKL 963


>gi|307187766|gb|EFN72738.1| Alanyl-tRNA synthetase, cytoplasmic [Camponotus floridanus]
          Length = 968

 Score =  870 bits (2247), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 455/969 (46%), Positives = 610/969 (62%), Gaps = 65/969 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R  +  FF+ K H    SS  +P +DPTLLF NAGMNQ+KPIFLGT DPN+ ++K 
Sbjct: 3   AKQIRQAYIDFFKSKGHEYVHSSSTIPHDDPTLLFTNAGMNQFKPIFLGTVDPNSDMAKW 62

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  N+QKCIRAGGKHNDLDDVGKD YHHTFFEM+GNWSFGDYFK E   WAWE LT V 
Sbjct: 63  VRVVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMMGNWSFGDYFKKEICAWAWEFLTDVL 122

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
           +LPADRLY TYFGGDEK GLAPD+E +D+WL   +PAS VLP   KDNFWEMG+TGPCGP
Sbjct: 123 KLPADRLYVTYFGGDEKNGLAPDDECKDLWLSLGIPASHVLPGNMKDNFWEMGETGPCGP 182

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSE+HYDR G R+AA LVN DDP  +EIWN+VFIQ+NRESDGSLK LP KH+D GLG ER
Sbjct: 183 CSELHYDRIGGREAAHLVNMDDPDVLEIWNLVFIQYNRESDGSLKSLPRKHIDCGLGLER 242

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S++QNK +NYDTD+FMP+F AI++ATGA  Y GKVGA+D D +DMAYRV+ADH RT++
Sbjct: 243 LVSVIQNKRANYDTDLFMPLFAAIEKATGAPSYQGKVGAEDVDGIDMAYRVLADHARTIT 302

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY +E L A+ GFF  LVN+VV ++G+VFPE+ +
Sbjct: 303 IALADGGMPDNTGRGYVLRRILRRAVRYATEKLNAKPGFFGSLVNVVVDLLGEVFPEVTK 362

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK-VLSGQDAFILWDTYGFPLDLTQ 477
              +I +I+  EE  F KTL +G     +    ++    + G  A+ L+DTYGFP+DLTQ
Sbjct: 363 DPQNIIDIVNEEETQFLKTLSRGRNLLNRTIAKLESSDTVPGDVAWRLYDTYGFPVDLTQ 422

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGG---AIVMDADATAALHKRGVLATD 534
           LM EE+GL +DI G+    +E++++++     +AGG    I +D  A   + + G+  TD
Sbjct: 423 LMTEEKGLKIDIAGY----EESKKQAQLISQNKAGGIDDQINLDIHAITEMQEHGIKPTD 478

Query: 535 DSFKF-------IWFQDHK-----SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQG 582
           DS K+       + +++++      ++ A+     F++ V  G EVGI+L  ++FYAEQG
Sbjct: 479 DSPKYDYKVISSVKYEEYEFAPCIGIVIALRRAKTFVDQVTSGEEVGILLDKTNFYAEQG 538

Query: 583 GQIFDEGF---IEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRK 639
           GQI+DEGF   ++       V+NVQ+  G+V+HIG++ EG  R   G++V   VD  RR+
Sbjct: 539 GQIYDEGFLVKVDDEATEIRVKNVQVRAGYVLHIGTVGEGTLR--KGDKVYTNVDTARRR 596

Query: 640 LIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNE 699
           L+  NH+ TH LN+ALR+VLG   DQKGS+V P++LRFDF++  P+  E ++  E+I  +
Sbjct: 597 LVMANHSATHALNYALRKVLGTGADQKGSLVAPDRLRFDFTNKGPMTTEQVKNTENITAD 656

Query: 700 QIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSI 759
            +K    +++KE+ LA AK I GLRA+F E YPDPVRV+++G  V+DL  +P +   L  
Sbjct: 657 MVKENKKIYAKESNLALAKTIQGLRAMFEETYPDPVRVISMGIPVDDLEKNPLSTAALET 716

Query: 760 SAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVD--- 816
           S E CGGTHL  T     F + SEE IAKGIRRI A+T   A KAF  A  L+ ++    
Sbjct: 717 SVEFCGGTHLHYTGHIGDFIIASEEAIAKGIRRIVALTGPEAAKAFRTATLLQNQLSHLR 776

Query: 817 -----DASKIEGSLLEKNQV--------------RKAQKKVAEENLQKAVKVATETAEAA 857
                D S        K  V              RK   +   + L+K++      A+AA
Sbjct: 777 ETIETDNSGTNSKEYVKKIVELTEEIMHAVIPSWRKDNMRATLKELKKSLDDKERAAKAA 836

Query: 858 ASN--------------GKPFCISRVEVGLDAAAVREAVLKV-IEQKGMPVMVFSTDETT 902
            +N              G    +  +E   +  A+  A+ K+ +       ++ S D   
Sbjct: 837 VANTVVETIQSIIQSRVGCQVLVEVLEAYSNTKALDSALKKIRVLSPETSALLISIDRDV 896

Query: 903 NKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDL 962
            K    + VP KS  SK L+ +EW+      ++G+ G GK   A   GT+ A +   +  
Sbjct: 897 KKIFALSSVP-KSAVSKGLKANEWIQVIAPAMQGKGG-GKPESAQASGTNIACLNEIISR 954

Query: 963 AAEFAAMKL 971
           A EFA  KL
Sbjct: 955 ANEFANQKL 963


>gi|170590129|ref|XP_001899825.1| Alanyl-tRNA synthetase [Brugia malayi]
 gi|158592744|gb|EDP31341.1| Alanyl-tRNA synthetase, putative [Brugia malayi]
          Length = 962

 Score =  869 bits (2246), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 478/968 (49%), Positives = 607/968 (62%), Gaps = 72/968 (7%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR  F  FF+D+ H    SS V+P +DPTLLFANAGMNQYKPIFLGT +P+++++KL R
Sbjct: 8   EVRAAFINFFKDREHTYVHSSSVIPFDDPTLLFANAGMNQYKPIFLGTVEPSSEMAKLKR 67

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFGDYFK E   WAWELLTKV  +
Sbjct: 68  AVNTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKLEVCNWAWELLTKVLGI 127

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGPCS 240
           P +RLY +YFGGDEK GL  D E R IWL   +P S +L FG KDNFWEMGD GPCGPCS
Sbjct: 128 PGERLYVSYFGGDEKTGLDADEECRQIWLNIGVPPSHILSFGMKDNFWEMGDVGPCGPCS 187

Query: 241 EIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLT 300
           EIHYDR GNRDA+ LVN DDP  +EIWN+VF+QFNRE DGSLK LP KH+D GLGFERL 
Sbjct: 188 EIHYDRVGNRDASHLVNADDPMVVEIWNLVFMQFNREEDGSLKQLPRKHIDCGLGFERLV 247

Query: 301 SILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFA 360
           ++LQNK+SNYDTD+F P+F AI   T  RPYSGKVGADD D +DMAYRV+ADHIRTLS A
Sbjct: 248 AVLQNKLSNYDTDIFTPLFXAIHNGTKVRPYSGKVGADDVDGIDMAYRVIADHIRTLSIA 307

Query: 361 IADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQRE 420
           ++DG  P N GR YVLRRILRR VRY +E L A  GF + LV  VV ++G  FPEL +  
Sbjct: 308 LSDGGRPDNTGRGYVLRRILRRGVRYANEKLSAPPGFLSSLVPTVVNLLGKTFPELHKDP 367

Query: 421 AHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG-KVLSGQDAFILWDTYGFPLDLTQLM 479
             + +II  EE  F KTL +G   F+KA   +QG  +L G  A+ L+DTYGFPLDLTQLM
Sbjct: 368 QAVMDIINDEEKQFLKTLSRGRTLFQKAVAGLQGHNILPGDVAWRLYDTYGFPLDLTQLM 427

Query: 480 AEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSFKF 539
           AEERGLLVD E F N   +A   S +  NK     I +D +A + L  +G+ ATDDS K+
Sbjct: 428 AEERGLLVDFEVFENCRQKAAGISAAHANKMR-DTIDLDVNAISELKNKGIPATDDSPKY 486

Query: 540 IW-------------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
            +             F+  + +I A+     F++++  G+   ++L  ++FYAEQGGQIF
Sbjct: 487 KYYALSSEDQQTLYNFEKCEGIILALRKDKIFLDTLNSGDFGALILDRTNFYAEQGGQIF 546

Query: 587 DEGFIEGL--FGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           D G +  +     F V NVQI GG+V+ +G++    G+  VG++VI  +D DRR LI  N
Sbjct: 547 DTGVLTEVDKGSEFIVSNVQIRGGYVVLVGTV---EGQLCVGDKVIQAIDEDRRNLIMKN 603

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           HT TH+LNFALR+V+G+ V+QKGS+V P++LRFD +  +P+  E +R +E      I   
Sbjct: 604 HTGTHVLNFALRKVIGE-VEQKGSLVAPDRLRFDLTAKQPLTYEQIRMVEKESQMLIDTN 662

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
             VF+K   LAEA+ INGLRA     YPDPVR+V++G  +E+LL + ++   ++ + E C
Sbjct: 663 ATVFAKNVPLAEARQINGLRA----AYPDPVRIVSVGIPIEELLRNKDSDLAVNTAVEFC 718

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDA-SKIEG 823
           GGTHL N        +  EE IAKGIRRI A+T   A++A   A  LE+ V+DA  KI  
Sbjct: 719 GGTHLHNVGHIGKLVITVEEAIAKGIRRIIALTGPEAFRAIHRADRLEQRVEDAHHKITT 778

Query: 824 SL---LEKNQVRKAQKKVAE----------------------ENLQK------------- 845
                L+K Q + A K+V E                      + LQK             
Sbjct: 779 DHMVNLDKAQFKAATKRVLELFEEINQSQLPYCRKESIRKKAKALQKLLDMHDREAKAVL 838

Query: 846 AVKVATETAEAAAS--NGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTN 903
           A KV  E +E  +S  +G  F +     G +   V ++ LK I  K   +M FS  +  +
Sbjct: 839 ADKVRCEASELDSSLKDGTLFTVHVFSKGAN-GKVLDSALKSI-TKSHAIMGFSVSD--D 894

Query: 904 KAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLA 963
             VV      K   SK L+ SEW++   Q L GR G G    A   G +A  V  A  +A
Sbjct: 895 GKVVAVARVSKDVASKGLQASEWISRVCQVLDGR-GGGTITQAQATGNNAELVEEAAQIA 953

Query: 964 AEFAAMKL 971
            +FA + L
Sbjct: 954 LKFAEVIL 961


>gi|281208624|gb|EFA82800.1| alanyl-tRNA synthetase [Polysphondylium pallidum PN500]
          Length = 958

 Score =  869 bits (2246), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 468/949 (49%), Positives = 631/949 (66%), Gaps = 48/949 (5%)

Query: 62  KVRDTFFKFFEDK-NHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLT 120
           ++R TF  FF +K  H    SS VVP +DPTLLFANAGMNQ+KPIFLG ADP ++ +KL 
Sbjct: 10  EIRKTFIDFFVNKCEHTFVPSSQVVPHDDPTLLFANAGMNQFKPIFLGQADPRSEQAKLK 69

Query: 121 RACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYR 180
           RA N+QKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFG+YFK EAI WAWELLT VY+
Sbjct: 70  RAANSQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGNYFKREAITWAWELLTDVYK 129

Query: 181 LPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPCS 240
           L  +RLYA+YFGG    GL PD EA+ IW +FLPA RVLPFG K+NFWEMGDTGPCGPCS
Sbjct: 130 LDKERLYASYFGGAADKGLEPDLEAKSIWEEFLPADRVLPFGMKENFWEMGDTGPCGPCS 189

Query: 241 EIHYDRTGNRDAA-SLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERL 299
           EIH+D+   R  + +LVN DDPT IEIWN+VFIQ+NRE+D SL+PLP KHVDTG+G ER+
Sbjct: 190 EIHFDKIEGRTGSQALVNADDPTLIEIWNLVFIQYNREADKSLRPLPNKHVDTGMGLERV 249

Query: 300 TSILQNKMSNYDTDVFMPIFDAIQQATG-ARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           TSI+Q   +NYDTD+F PIF  IQ+ TG   PY GKVG DD ++VDMAYRV+ADHIRTL+
Sbjct: 250 TSIIQKVGTNYDTDIFGPIFTEIQKVTGFTEPYGGKVGKDDPEQVDMAYRVIADHIRTLT 309

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
           F++ADG+ P ++GR  VLRRILRRA+RYG + LKA  GFF+ LV++VV   G+ FPEL+ 
Sbjct: 310 FSLADGAIPSSDGRGSVLRRILRRAIRYGKQKLKAPPGFFHRLVDVVVAHFGEFFPELRS 369

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQL 478
           R  HI  +I +EE  F +TL KGI +F+   +     V+S   A  L  ++GFP+DLT L
Sbjct: 370 RPQHIISVIESEEKMFERTLDKGILEFENILKKTSNGVISASHAHYLSSSFGFPIDLTTL 429

Query: 479 MAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSFK 538
           MAEE+G+ VD++G+   +++  E SR  Q K+    + + A+  + L KR +  T+D +K
Sbjct: 430 MAEEKGVKVDLKGYEVLVEKFAEDSRRRQ-KEKKSELNLGAEPISILQKRSIQPTNDQYK 488

Query: 539 FIWFQDHKSVIKAIYTGSEFIESVVPGNE---VGIVLASSSFYAEQGGQIFDEG---FIE 592
           +   ++ ++V+KAI+TG E I+ +   ++   VG++L S++FY EQGGQI+D G   F++
Sbjct: 489 YEQ-KEVQTVVKAIWTGKELIDQLTAEHKNTLVGVILESTNFYPEQGGQIYDIGNINFVD 547

Query: 593 GLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLN 652
               +F V + +++GG+V+HIG +++   + +VG++V   VDY RR  I  NHT THM+N
Sbjct: 548 SQNTAFTVSDCKVFGGYVLHIGYISDDCDKLAVGDKVETTVDYTRRIPIMSNHTSTHMVN 607

Query: 653 FALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEA 712
           FALR+VLG  VDQ+GS+V   +LRFDFS  K +  + L + ++IVNE I  +L+V+ K+ 
Sbjct: 608 FALRQVLGSTVDQRGSLVDNTRLRFDFSSTKGMSKDELVKTDAIVNELIAKQLNVYCKDV 667

Query: 713 TLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNT 772
            LA AK I GLRAVFGEVYPDPVRVV++G  V DLLA+P N EW + S E CGGTH++N+
Sbjct: 668 ELASAKKIYGLRAVFGEVYPDPVRVVSVGVDVNDLLANPSNTEWANYSIEFCGGTHIANS 727

Query: 773 REAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGS-------- 824
           +EAE F ++SEE ++ G+RR+ AVT   A   ++    LE    DA+K+ G         
Sbjct: 728 KEAELFTIVSEEAVSAGVRRLFAVTGTDASVVYDNNRKLETAFTDAAKLTGKDLKDHVPS 787

Query: 825 -----------------LLEK-----NQVRKAQKKVAEENLQKAVKVATETAEAAASNGK 862
                            LLEK       V+K  K++   ++  + KV  E       +  
Sbjct: 788 LLALLESHPVSASKRIELLEKLNNLQTTVKKYFKELESSSISDSNKVVDEIIAQLTESKA 847

Query: 863 PFCISRVEVGLDAAAVREAVLKVIEQKGMP---VMVFSTDETTNKAVVCAGVPEKSD-QS 918
           P  +  + +GL+ +A+ +A+  V  QK  P   +M  S D+   K  V + VP  S   S
Sbjct: 848 PVHVGVINLGLNNSAITDAIKNV--QKKCPDTAIMFVSPDQEKKKVCVLSIVPPTSTAAS 905

Query: 919 KQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFA 967
           K L  + W+    + L G+ G GK  +A G G+    V  A++ A +FA
Sbjct: 906 KGLTANGWVVKVAEQLGGKGG-GKTDVAQGTGSQIENVDNAVEFAKDFA 953


>gi|213512300|ref|NP_001133550.1| Alanyl-tRNA synthetase, cytoplasmic [Salmo salar]
 gi|209154450|gb|ACI33457.1| Alanyl-tRNA synthetase, cytoplasmic [Salmo salar]
          Length = 967

 Score =  869 bits (2245), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 469/967 (48%), Positives = 613/967 (63%), Gaps = 65/967 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R+ F  FF    H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  +++L
Sbjct: 7   AAQIREKFIDFFIRHEHQYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMARL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK+ A   A ELLTK +
Sbjct: 67  KRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKHLACTMALELLTKEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +P +RLY TYFGG E+AGL PD E + IWL   +  +R++P   KDNFWEMGDTGPCGP
Sbjct: 127 GIPIERLYVTYFGGHEEAGLDPDLECKQIWLDLGMDEARIIPGSMKDNFWEMGDTGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIH+DR G RDAA LVN DDP  +EIWN+VFIQ+NRES+  LKPLP K +DTG+G ER
Sbjct: 187 CSEIHFDRIGGRDAAHLVNMDDPNVLEIWNLVFIQYNRESETELKPLPKKSIDTGMGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+F+P F AIQ+ TGAR Y+GKVGA+D D +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFIPYFQAIQKGTGARDYTGKVGAEDVDGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A++DG  P N GR YVLRRILRRAVRY  E L AQ GFF  LV++VV+ +GD FPELK+
Sbjct: 307 IALSDGGRPDNTGRGYVLRRILRRAVRYSHEKLGAQKGFFATLVDVVVESLGDAFPELKK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
               +++II  EE  F KTL +G +   +  Q +   K + G  A++L+DTYGFPLDLT 
Sbjct: 367 DPDMVKDIINEEEEQFLKTLSRGRKILDRKIQSLGDSKTIPGDTAWLLYDTYGFPLDLTA 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
           L+AEERG++VD+  F      A+ +S   Q K +G    I++D  A   L  +G+ ATDD
Sbjct: 427 LIAEERGMMVDVAAFEEEKKAAQVKS---QGKGSGDEDHIMLDIYAIEDLRNKGIAATDD 483

Query: 536 SFKFIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           + K+ +         F+     + A+     F+E V  G E G++L  +SFYAEQGGQ F
Sbjct: 484 TLKYSYSADDSGKYVFEQAVGTVLALRRERAFVEEVTTGQECGVLLDKTSFYAEQGGQSF 543

Query: 587 DEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           DEG++     S      F V+N Q+ GG+V+H+G++    G   VG+ VI  VD  RR+ 
Sbjct: 544 DEGYMLREDDSVDDRMEFTVKNTQVRGGYVLHVGTVY---GTLKVGDHVILHVDEARRRP 600

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           I  NHT TH+LNFALREVLG+  DQ+GS+V P++LRFDF+    +  E +RR E I    
Sbjct: 601 IMSNHTATHILNFALREVLGE-ADQRGSLVAPDRLRFDFTAKGALSTEEVRRTEEIACTM 659

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I+    V++ +  LA AK I GLRAVF E YPDPVRVV+IG  V DLLADP +      S
Sbjct: 660 IRDAKHVYAMDTPLAAAKAIQGLRAVFDETYPDPVRVVSIGIPVADLLADPSSTAGSLTS 719

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSL--------- 811
            E CGGTHL N+  A  F ++SEE IAKGIRRI AVT   A KA   A +L         
Sbjct: 720 IEFCGGTHLRNSGHAAPFVIVSEEAIAKGIRRIVAVTGAEAQKAHRKADALRQSLSALGE 779

Query: 812 ------------EKEVDDASKIEG----SLLEKNQVRKAQK--KVAEENLQKAVK----- 848
                       +KE+ D ++  G    S  +K+++R+A K  K   ++L +A K     
Sbjct: 780 KVKVQTAPNKDVQKEIADMTEFLGMAVISQWQKDKMREALKGLKKTMDDLDRASKADVQK 839

Query: 849 -VATETAEAA-ASNGKPFCISRVEVGLDAAAVREAVLKVIEQKG--MPVMVFSTDETTNK 904
            V  +T E   +S  +P  +  +E G  A A+ E+ LK+++ +      M+F+ D    K
Sbjct: 840 RVLEKTKEMIDSSPNQPLVVMEMESGASAKALNES-LKLLKTQSPQTAAMLFTVDHDAGK 898

Query: 905 AVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAA 964
            V    VP+    ++ L+ SEW+   L PL    G GK   A   G +   +  A+ +A 
Sbjct: 899 IVCLCQVPQDV-ANRGLKASEWVQ-ELCPLMDGKGGGKDMSAQATGRNTHCIEEALQMAN 956

Query: 965 EFAAMKL 971
           +FA +KL
Sbjct: 957 QFAQLKL 963


>gi|254571161|ref|XP_002492690.1| Cytoplasmic alanyl-tRNA synthetase [Komagataella pastoris GS115]
 gi|238032488|emb|CAY70511.1| Cytoplasmic alanyl-tRNA synthetase [Komagataella pastoris GS115]
          Length = 981

 Score =  869 bits (2245), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 471/958 (49%), Positives = 608/958 (63%), Gaps = 51/958 (5%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           EW A KVR TFF FF+ K+H    SS V+P +DPTLLF NAGMNQYKPIFLGT DP++  
Sbjct: 30  EWTANKVRSTFFDFFKSKDHTYVPSSSVIPYDDPTLLFTNAGMNQYKPIFLGTVDPSSDF 89

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
           + L RA N+QKCIRAGGKHNDL+DVG+D+YHHTFFEMLGNWSFGDYFK EAI + WELLT
Sbjct: 90  ATLKRATNSQKCIRAGGKHNDLEDVGRDSYHHTFFEMLGNWSFGDYFKKEAIGYGWELLT 149

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
           KVY L  +RLY +YFGGD   GL PD EA++ W    +    +LP   +DNFWEMGD GP
Sbjct: 150 KVYGLEKERLYVSYFGGDAGLGLEPDLEAKEYWKALGVAEDHILPGSVEDNFWEMGDQGP 209

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPCSEIHYDR G R+AASLVN DDP  +EIWNIVFIQFNRE+DGSLKPLP+KH+DTG+G
Sbjct: 210 CGPCSEIHYDRIGGRNAASLVNQDDPDVLEIWNIVFIQFNREADGSLKPLPSKHIDTGMG 269

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
           FERL SILQN  SNYDTDVF P+F  IQ+ TG RPYSG  G +D D +D AYRV+ADH+R
Sbjct: 270 FERLVSILQNVRSNYDTDVFDPLFTKIQEITGVRPYSGHFGKEDMDGIDTAYRVLADHVR 329

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFP 414
           TL+F++ADG  P NEGR YVLRRILRR  RY  + +    G FF+ L   +++ + + FP
Sbjct: 330 TLTFSLADGGVPNNEGRGYVLRRILRRGARYARKYMNYPIGKFFSQLAPALIEQVKETFP 389

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTYGF 471
           E+ +    I EI+  EEASF +TL +G    E++   A     + L+G+D + L+DTYGF
Sbjct: 390 EVDKNFDTIAEILDEEEASFSRTLDRGERLFEQYAIIASKTPEQTLAGRDVWRLYDTYGF 449

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRG-V 530
           P+DLT+LMAEE GL +D EGF  A + +RE S+     Q    + +D      L K   V
Sbjct: 450 PVDLTRLMAEETGLKIDDEGFEIAKEASREASKGNGKTQGKELVKLDVHVLGELEKNSEV 509

Query: 531 LATDDSFKFIWFQDHKSVIKAIYTGSEFIES---VVPGNEVGIVLASSSFYAEQGGQIFD 587
             TDDS+K+   ++ ++ I AIY G E I+S   V    ++GI+L  + FYAEQGGQI+D
Sbjct: 510 PKTDDSYKY-GTKNIEASIVAIYNGKELIQSTSEVADDQQLGILLDKTPFYAEQGGQIYD 568

Query: 588 EG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            G   I+G+   F V NVQ Y G+V+H G + EG    SV +++I   D  RR  I  NH
Sbjct: 569 TGKIVIDGV-AEFNVENVQSYAGYVLHTGYVEEGV--LSVSDKIIAGYDELRRWPIKNNH 625

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           T TH+LNFALR+VLGD V+QKGS+V PEKLRFDFSH K +    L+++E I NE IK  +
Sbjct: 626 TGTHILNFALRDVLGDDVEQKGSLVAPEKLRFDFSHKKALTLSELQKVEDISNEVIKKNV 685

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            VF+ + TLA  K INGLRAVFGE YPDPVRVV+IG  VE+L+ +P N EW + S E CG
Sbjct: 686 PVFASDVTLAVGKEINGLRAVFGETYPDPVRVVSIGVPVEELVKNPSNAEWHNASIEFCG 745

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKI---- 821
           GTH++ T + + F ++ E GIAKGIRRI AVT+  A+     A     ++D  +K+    
Sbjct: 746 GTHVAKTGDIKDFVIIEESGIAKGIRRIVAVTSTEAHTVQRIAREKNDQLDAIAKMSFGE 805

Query: 822 --EGSLLEKN---------QVRKAQKKVAEENLQKAVKVATETAEAAASN---------- 860
             E  L E N          + K   K    N++K VK   +  + A S           
Sbjct: 806 AKEKKLKEFNVALGKLQISVLAKNDLKTKFTNIEKVVKDELKVRQKAESKKTLDTVKDYF 865

Query: 861 ----GKPFCISRVEVGLDAAAVREA---VLKVIEQKGMPVMVFSTDETTNKAVVCAGVPE 913
                 PF ++ V V  +A  + EA   + K I  K + ++V   +E+  K      V +
Sbjct: 866 NEHEDSPFFVAHVPVSSNAKLLTEAFSYIKKEIPDKSLYLIV--GNESEPKIAQGCYVSD 923

Query: 914 KSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
            +  SK +  SE    A + + G+ G GKG +  G GT+   +  A++   +    KL
Sbjct: 924 NA-LSKGVVASEVTNVASEFIGGKAG-GKGNICQGVGTNPEGINKAIEAVTKILKEKL 979


>gi|328353302|emb|CCA39700.1| alanyl-tRNA synthetase [Komagataella pastoris CBS 7435]
          Length = 959

 Score =  868 bits (2243), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 471/958 (49%), Positives = 608/958 (63%), Gaps = 51/958 (5%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           EW A KVR TFF FF+ K+H    SS V+P +DPTLLF NAGMNQYKPIFLGT DP++  
Sbjct: 8   EWTANKVRSTFFDFFKSKDHTYVPSSSVIPYDDPTLLFTNAGMNQYKPIFLGTVDPSSDF 67

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
           + L RA N+QKCIRAGGKHNDL+DVG+D+YHHTFFEMLGNWSFGDYFK EAI + WELLT
Sbjct: 68  ATLKRATNSQKCIRAGGKHNDLEDVGRDSYHHTFFEMLGNWSFGDYFKKEAIGYGWELLT 127

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
           KVY L  +RLY +YFGGD   GL PD EA++ W    +    +LP   +DNFWEMGD GP
Sbjct: 128 KVYGLEKERLYVSYFGGDAGLGLEPDLEAKEYWKALGVAEDHILPGSVEDNFWEMGDQGP 187

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPCSEIHYDR G R+AASLVN DDP  +EIWNIVFIQFNRE+DGSLKPLP+KH+DTG+G
Sbjct: 188 CGPCSEIHYDRIGGRNAASLVNQDDPDVLEIWNIVFIQFNREADGSLKPLPSKHIDTGMG 247

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
           FERL SILQN  SNYDTDVF P+F  IQ+ TG RPYSG  G +D D +D AYRV+ADH+R
Sbjct: 248 FERLVSILQNVRSNYDTDVFDPLFTKIQEITGVRPYSGHFGKEDMDGIDTAYRVLADHVR 307

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFP 414
           TL+F++ADG  P NEGR YVLRRILRR  RY  + +    G FF+ L   +++ + + FP
Sbjct: 308 TLTFSLADGGVPNNEGRGYVLRRILRRGARYARKYMNYPIGKFFSQLAPALIEQVKETFP 367

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTYGF 471
           E+ +    I EI+  EEASF +TL +G    E++   A     + L+G+D + L+DTYGF
Sbjct: 368 EVDKNFDTIAEILDEEEASFSRTLDRGERLFEQYAIIASKTPEQTLAGRDVWRLYDTYGF 427

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRG-V 530
           P+DLT+LMAEE GL +D EGF  A + +RE S+     Q    + +D      L K   V
Sbjct: 428 PVDLTRLMAEETGLKIDDEGFEIAKEASREASKGNGKTQGKELVKLDVHVLGELEKNSEV 487

Query: 531 LATDDSFKFIWFQDHKSVIKAIYTGSEFIES---VVPGNEVGIVLASSSFYAEQGGQIFD 587
             TDDS+K+   ++ ++ I AIY G E I+S   V    ++GI+L  + FYAEQGGQI+D
Sbjct: 488 PKTDDSYKY-GTKNIEASIVAIYNGKELIQSTSEVADDQQLGILLDKTPFYAEQGGQIYD 546

Query: 588 EG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            G   I+G+   F V NVQ Y G+V+H G + EG    SV +++I   D  RR  I  NH
Sbjct: 547 TGKIVIDGV-AEFNVENVQSYAGYVLHTGYVEEGV--LSVSDKIIAGYDELRRWPIKNNH 603

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           T TH+LNFALR+VLGD V+QKGS+V PEKLRFDFSH K +    L+++E I NE IK  +
Sbjct: 604 TGTHILNFALRDVLGDDVEQKGSLVAPEKLRFDFSHKKALTLSELQKVEDISNEVIKKNV 663

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            VF+ + TLA  K INGLRAVFGE YPDPVRVV+IG  VE+L+ +P N EW + S E CG
Sbjct: 664 PVFASDVTLAVGKEINGLRAVFGETYPDPVRVVSIGVPVEELVKNPSNAEWHNASIEFCG 723

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKI---- 821
           GTH++ T + + F ++ E GIAKGIRRI AVT+  A+     A     ++D  +K+    
Sbjct: 724 GTHVAKTGDIKDFVIIEESGIAKGIRRIVAVTSTEAHTVQRIAREKNDQLDAIAKMSFGE 783

Query: 822 --EGSLLEKN---------QVRKAQKKVAEENLQKAVKVATETAEAAASN---------- 860
             E  L E N          + K   K    N++K VK   +  + A S           
Sbjct: 784 AKEKKLKEFNVALGKLQISVLAKNDLKTKFTNIEKVVKDELKVRQKAESKKTLDTVKDYF 843

Query: 861 ----GKPFCISRVEVGLDAAAVREA---VLKVIEQKGMPVMVFSTDETTNKAVVCAGVPE 913
                 PF ++ V V  +A  + EA   + K I  K + ++V   +E+  K      V +
Sbjct: 844 NEHEDSPFFVAHVPVSSNAKLLTEAFSYIKKEIPDKSLYLIV--GNESEPKIAQGCYVSD 901

Query: 914 KSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
            +  SK +  SE    A + + G+ G GKG +  G GT+   +  A++   +    KL
Sbjct: 902 NA-LSKGVVASEVTNVASEFIGGKAG-GKGNICQGVGTNPEGINKAIEAVTKILKEKL 957


>gi|294932634|ref|XP_002780365.1| cytosolic tRNA-Ala synthetase, putative [Perkinsus marinus ATCC
           50983]
 gi|239890298|gb|EER12160.1| cytosolic tRNA-Ala synthetase, putative [Perkinsus marinus ATCC
           50983]
          Length = 982

 Score =  868 bits (2243), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 470/976 (48%), Positives = 628/976 (64%), Gaps = 66/976 (6%)

Query: 45  VAAMPGADPQVVEWPATKVRDTFFKFF-EDKNHVNWKSSPVVPVNDPTLLFANAGMNQYK 103
           ++ MP  DP++ +   + VRDTF  FF E K     KSSPVVP NDPTLLF NAGMNQ+K
Sbjct: 15  LSTMP-IDPRLSD--PSVVRDTFINFFVEKKGATFLKSSPVVPHNDPTLLFINAGMNQFK 71

Query: 104 PIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYF 163
           PIFLG  D +     + RA NTQKCIRAGGKHNDL+DVGKDTYHHTFFEMLGNWSFGD+F
Sbjct: 72  PIFLGQLDKDHPFYGVKRATNTQKCIRAGGKHNDLEDVGKDTYHHTFFEMLGNWSFGDFF 131

Query: 164 KNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAP-DNEARDIWLKFLPASRVLPFG 222
           K E I WAWELLT+V+ L   RLYATY+GGD K    P D+EARD+WLKFLP   V+PFG
Sbjct: 132 KAEQIPWAWELLTEVFGLDPARLYATYYGGDPKEPEVPADDEARDLWLKFLPPDHVIPFG 191

Query: 223 CKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSL 282
            K+NFWEMGDTGPCGPCSEIHYD  G RDA++LVN DDPT IEIWN+VF+Q+NRE+DGSL
Sbjct: 192 MKENFWEMGDTGPCGPCSEIHYDNVGGRDASALVNMDDPTVIEIWNLVFMQYNRENDGSL 251

Query: 283 KPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQ-QATGARPYSGKVGADDAD 341
             LP   VDTG+GFER+ + L  K SNYDTDVF PIF AIQ Q  G R Y+G++     D
Sbjct: 252 TRLPHPCVDTGMGFERICAALTGKTSNYDTDVFKPIFAAIQEQIPGLRSYTGEL----TD 307

Query: 342 KVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGL 401
            +D+ YRVVADHIRTL+ A++DG+ P NEGR YVLRRILRRAVRYG+E L A  GFFN L
Sbjct: 308 NIDVGYRVVADHIRTLTVALSDGAVPSNEGRGYVLRRILRRAVRYGTEKLNAPAGFFNKL 367

Query: 402 VNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQD 461
           V  VV+ +G+ FPE+   +A ++ +IA EE  F +TL +GI +F   A   +GKVLSG+D
Sbjct: 368 VPAVVESLGEAFPEIVANQADVQALIADEEEQFARTLERGIREFNSRASKTEGKVLSGRD 427

Query: 462 AFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADA 521
           AF L+ T+GFP DLTQ+MA+ERG+ VD++ F    +  R++S+ + N   G  + + AD 
Sbjct: 428 AFELFTTFGFPCDLTQVMAQERGMTVDVQSFEEEFEAFRQKSKESNNFTMGSNLQLFADQ 487

Query: 522 TAALHKR-GVLATDDSFKFIWFQ------DHKSVIKAIYTGSEFIESV-----VPGNEVG 569
           T  L     V  TD++ K+ W           S + AI+ G ++++++          +G
Sbjct: 488 TNYLENELKVPKTDETCKYAWDSAKGEGGQWSSQLCAIWDGKKWLDTIDVKSGYAQKTIG 547

Query: 570 IVLASSSFYAEQGGQIFDEG-FIEGLFGS-FYVRNVQIYGGFVIHIGSLTEGA-GRFSVG 626
           +VL+ + FYAEQGGQIFD G  ++ L G+ F V+N Q +G +V+HIGS+         VG
Sbjct: 548 LVLSVTPFYAEQGGQIFDVGTIVDPLTGARFDVKNTQKFGQYVLHIGSMDSAVDAALKVG 607

Query: 627 EEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVD 686
            EV   VDY RR LIA NHT TH+LNFALR+VLGD  DQ+GS+V P +LRFDF+  KP+ 
Sbjct: 608 SEVRASVDYQRRALIAKNHTATHILNFALRQVLGDKCDQRGSLVDPSRLRFDFAQNKPIT 667

Query: 687 PEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVED 746
            E L+ IE I N+QI+  L+VF+ +  LA+AK I GLRAVFGE YPDPVRVV++G  ++ 
Sbjct: 668 NEQLKEIEQICNQQIQKHLNVFANDVQLAKAKDIRGLRAVFGETYPDPVRVVSVGEAIDT 727

Query: 747 LLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVT-TGLAYKAF 805
           LL + E       S E CGGTH+ N++E   F + +EEGIAKGIRRI A T    A +A 
Sbjct: 728 LLKETEVDFGHEFSIEFCGGTHVGNSQEIFKFVITAEEGIAKGIRRIVAATGPQAAVEAS 787

Query: 806 EAACSLEKEVDDASKIEGSLLEKNQVRKAQKKVAEEN----------------------- 842
                L +E++ A  ++G +L+ + + + + K+ EE                        
Sbjct: 788 IKTTDLMEELNSAKALKGEVLD-HAIAQLRNKLNEEKEVSLTAKKDMLCLLDDLKTQQIK 846

Query: 843 ---------LQKAVKVATETAEAAASNGKPFCISRV-EVGLDAAAVREAVLKVIEQ-KGM 891
                     ++A K+  + AE+  ++   F I++  E+  DA A++ AV  + ++   +
Sbjct: 847 EEKKKAKEVQKQAAKIGEQLAESIGASEGKFLITQCDELLADAKAMQNAVDSIAKKLPEL 906

Query: 892 PVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGT 951
           PV + S   +++K  V   VP+    SK++   EWL   L+   G+ G G    A GQ  
Sbjct: 907 PVCIVSA--SSSKLAVLITVPKS--MSKKVSAKEWLNVCLETCGGK-GGGSPMKAQGQSQ 961

Query: 952 DAAQVTPAMDLAAEFA 967
           + ++V   ++++ ++A
Sbjct: 962 EPSKVAETIEVSKQWA 977


>gi|302681375|ref|XP_003030369.1| hypothetical protein SCHCODRAFT_82606 [Schizophyllum commune H4-8]
 gi|300104060|gb|EFI95466.1| hypothetical protein SCHCODRAFT_82606 [Schizophyllum commune H4-8]
          Length = 949

 Score =  867 bits (2241), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 467/948 (49%), Positives = 608/948 (64%), Gaps = 46/948 (4%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + +VR  FF +F+ K H   +SSP VP +DPTLLFANAGMNQ+KP+FLGT DP++ LSKL
Sbjct: 9   SRQVRQDFFDYFQSKGHTFVRSSPTVPYDDPTLLFANAGMNQFKPLFLGTVDPHSDLSKL 68

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            RA N+QKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK EAI ++WELLT+VY
Sbjct: 69  KRAYNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIAYSWELLTEVY 128

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
           +LP DRLY +YF GD K GL PD EA+  WL   +P   +LP   KDNFWEMG TGPCGP
Sbjct: 129 KLPKDRLYVSYFEGDPKNGLEPDLEAKQYWLDIGVPEDHILPGNAKDNFWEMGATGPCGP 188

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G R+AA LVN DDP  +EIWN VFIQFNRE DGSLKPLP+KHVDTG+GFER
Sbjct: 189 CSEIHYDRIGGRNAAHLVNQDDPDVLEIWNNVFIQFNREDDGSLKPLPSKHVDTGMGFER 248

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S++Q+K SNYDTDVF PIF  +Q+ TG RPY G  G DD D +D AYRVVADH+RTL+
Sbjct: 249 LVSVVQDKRSNYDTDVFSPIFQRVQELTGVRPYQGLFGPDDKDGIDTAYRVVADHVRTLT 308

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFPELK 417
           FA++DG  P N GR YVLRRILRR  RY  + L    G FF+ L+ +VV+ MGDVFPE+ 
Sbjct: 309 FALSDGGVPNNVGRGYVLRRILRRGARYARKKLGVTIGSFFSSLMPVVVEHMGDVFPEIT 368

Query: 418 QREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLD 474
           ++   I+EI+  EE SF +TL +G    +++ K A++   K L+G+D + L+DTYGFP+D
Sbjct: 369 KKLPEIKEILDEEEESFARTLDRGEKLFDQYAKRAKEQNLKELNGKDVWRLYDTYGFPVD 428

Query: 475 LTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLA-T 533
           LT LMAEE GL ++ + F +A   ++E S++ QNK A   + +D    AAL K G +A T
Sbjct: 429 LTTLMAEELGLGINEKEFEDAQAWSKEASKATQNKDAATVVKLDVHDIAALEKGGDVAKT 488

Query: 534 DDSFKFIWFQDHKSVIKAIYTGSEFIESV--VP-GNEVGIVLASSSFYAEQGGQIFDEG- 589
           DDS K+    +  + +K I+    F++S   +P     GI+L  ++FYAE GGQ  D G 
Sbjct: 489 DDSSKYNQ-GNITATVKKIFHNKAFLDSTSDIPEATSFGIILDRTNFYAESGGQENDTGG 547

Query: 590 -FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
             I+G+   F V +VQ+Y G+V+H+G L    G   VG EV+   D  RR  +  NHT T
Sbjct: 548 IVIDGV-AEFEVTDVQVYNGYVLHVGHLK--YGDLEVGNEVVASYDELRRWPLRNNHTAT 604

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+LN+ LREVLGDH+DQKGS+V P KLRFDFSH   +    L +IES+  + IK  + V+
Sbjct: 605 HILNYCLREVLGDHIDQKGSLVAPTKLRFDFSHKAQIPLPELTQIESMSVDWIKKNVKVY 664

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
            K+  L  A+ I GLRAVFGE YPDPVRVV++   V+++ AD EN +W S S E CGGTH
Sbjct: 665 GKDMDLKSAQKIPGLRAVFGETYPDPVRVVSLEFSVDEISADIENPKWRSTSIEFCGGTH 724

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGS---- 824
           ++ T + + F +  E GIAKGIRRI AVT   A +A   A +L+ ++D   K+ G     
Sbjct: 725 VAKTGDIKHFVITEESGIAKGIRRIVAVTGHEAAEATRLADALQIKLDQIEKMTGKEADA 784

Query: 825 -----LLEKNQ-----VRKAQKKVAEENLQKAVKVATETAEAAASN-------------- 860
                 +  NQ     +RK+Q K    +++KA     +  EAA +               
Sbjct: 785 AIKAFTVTLNQADTSIIRKSQLKDRLASVRKAFDKQVKEREAALNKDALDQFRTFFEQTP 844

Query: 861 GKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQ 920
           G P  +S + V  +A  ++  V +   + G  V +FS D    K      VP  + + K 
Sbjct: 845 GAPAFVSILHVDGNAKLLQNVVAQA-RKAGKAVYLFSPDPEGTKVAHVNFVP-PALREKG 902

Query: 921 LEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAA 968
           L+   W       L G+ G GK   A G GT+  +V  A+  A ++ A
Sbjct: 903 LDAKTWAAKVTDVLGGKAG-GKEDSAQGVGTNVDRVDDALKAAGQYVA 949


>gi|19114552|ref|NP_593640.1| mitochondrial and cytoplasmic alanine-tRNA ligase Ala1 (predicted)
           [Schizosaccharomyces pombe 972h-]
 gi|3183171|sp|O13914.1|SYA_SCHPO RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|2330773|emb|CAB11162.1| mitochondrial and cytoplasmic alanine-tRNA ligase Ala1 (predicted)
           [Schizosaccharomyces pombe]
          Length = 959

 Score =  867 bits (2240), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 469/964 (48%), Positives = 601/964 (62%), Gaps = 52/964 (5%)

Query: 51  ADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTA 110
           A+ +VV WPA ++R TF K+FED  H    SS V+P +DPTLLFANAGMNQ+KPIFLGT 
Sbjct: 3   AESEVVNWPANEIRRTFLKYFEDHGHTIVPSSSVIPYDDPTLLFANAGMNQFKPIFLGTV 62

Query: 111 DPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEW 170
           DP++  +KL RAC++QKCIRAGGKHNDL+DVGKD YHHT FEMLGNWSFGDYFK EAI  
Sbjct: 63  DPSSDFAKLKRACDSQKCIRAGGKHNDLEDVGKDNYHHTMFEMLGNWSFGDYFKKEAIAM 122

Query: 171 AWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWE 229
           AW+LLT VY L  D+LY TYFGG E++GL PD EAR +WL   +  SRV+P   KDNFWE
Sbjct: 123 AWDLLTNVYGLKKDQLYVTYFGGHEESGLEPDLEARQLWLDIGIDESRVIPGSLKDNFWE 182

Query: 230 MGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKH 289
           MGD GPCGPCSEIHYDR GNR    LVN DDP  +EIWNIVFIQFNRE DGSL+PLP +H
Sbjct: 183 MGDQGPCGPCSEIHYDRIGNRTVPELVNMDDPNVLEIWNIVFIQFNREKDGSLRPLPNRH 242

Query: 290 VDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRV 349
           VDTG+GFERL S++QNK SNYDTDVF PIF  IQ+ T ARPY+GK+G +D D +D AYRV
Sbjct: 243 VDTGMGFERLVSVIQNKTSNYDTDVFSPIFAKIQELTNARPYTGKMGDEDVDGIDTAYRV 302

Query: 350 VADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKV 408
           VADH+RTL+FAI+DG  P NEGR YVLRRILRR  RY  +      G FF+ L   VV+ 
Sbjct: 303 VADHVRTLTFAISDGGVPNNEGRGYVLRRILRRGARYVRKKFGVPIGNFFSRLSLTVVEQ 362

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFIL 465
           MGD FPELK++   +RE++  EE SF +TL +G    E++  AA+    K L G D + L
Sbjct: 363 MGDFFPELKRKVDDVRELLDEEEESFSRTLDRGEKMFEQYAAAAKKTPSKTLQGNDVWRL 422

Query: 466 WDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGG--AIVMDADATA 523
           ++TYGFP+DLT LMAEE G+ +D  GF  A   ++E S+ A    + G   +V+D  A  
Sbjct: 423 YETYGFPVDLTHLMAEEAGIKIDEPGFEAAQARSKEISKQASKGGSSGDDLLVLDVHALG 482

Query: 524 ALHKR-GVLATDDSFKFIWFQDHKSVIKAIYTGSEF---IESVVPGNEVGIVLASSSFYA 579
           AL K   +  TDD FK       KSVIK IY    F    E    G ++G++L  ++FYA
Sbjct: 483 ALSKMDDIPETDDVFKHNSVS-LKSVIKGIYHKGGFQKSTEGFNSGEQLGLLLDRTNFYA 541

Query: 580 EQGGQIFDEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDR 637
           EQGGQ +D G   I+G+   F V NVQ+Y G+V+H G L    G  +V + V+C+ D  R
Sbjct: 542 EQGGQEYDTGHIVIDGV-ADFRVTNVQVYAGYVLHTGFLE--YGNLTVNDSVVCEYDEIR 598

Query: 638 RKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIV 697
           R  +  NHT TH+LN ALR  LGD +DQ+GS+V  EKLRFDFS+   +  + L  +E+  
Sbjct: 599 RWHLMNNHTVTHILNLALRNTLGDGIDQRGSLVSQEKLRFDFSYKSSIPIDKLLLVENYC 658

Query: 698 NEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWL 757
           N  I+  L V+SKE  L++AK INGLRAVFGEVYPDPVRVV IG  ++ LL +P+  +W 
Sbjct: 659 NNVIQDNLSVYSKEVALSKAKEINGLRAVFGEVYPDPVRVVCIGVDIDTLLQEPKKPDWT 718

Query: 758 SISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDD 817
             S E CGGTH   + E + F +L E GIAKGIRRI AVT+  A +    A   +  +  
Sbjct: 719 KYSIEFCGGTHCDKSGEIKDFVILEENGIAKGIRRIVAVTSTEANRVSRLANEFDARIAK 778

Query: 818 ASKIEGSLLEKNQVRK------------AQKKVAEENLQKAVKVATETAEA--AASNGK- 862
             K+  S  ++ +++K             +K   +E + K  K   E  +A  AA   + 
Sbjct: 779 LEKMPFSPAKEAELKKISVDLSKLVVAAVRKHAMKERIAKITKQVQEHVKAINAAEQKEV 838

Query: 863 --------------PFCISRVEVGLDAAAVREAVLKVIEQ-KGMPVMVFSTDETTNKAVV 907
                          F +++V +  +  A+  A+    +  K   + + ++D+ T  A  
Sbjct: 839 VNVVTEYFKENPDMSFVVAKVPISANPKALSFALTYAKKNLKDKSIYLLASDD-TKVAHA 897

Query: 908 CAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFA 967
           C   PE     K+L   EW       + GR G GKG    G G     +  A++ A EF 
Sbjct: 898 CLVSPE---AMKKLTPQEWSQKVCHSIGGRSG-GKGDTCQGVGDKPLSIDVAVEEAIEFF 953

Query: 968 AMKL 971
             KL
Sbjct: 954 QGKL 957


>gi|453082882|gb|EMF10929.1| alanyl-tRNA synthetase [Mycosphaerella populorum SO2202]
          Length = 1007

 Score =  867 bits (2240), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 482/965 (49%), Positives = 617/965 (63%), Gaps = 52/965 (5%)

Query: 45   VAAMPGADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKP 104
            +A+  G +P   EW A KVR TF ++FE   H    S  VVP++DPTLLF NAGMNQ+K 
Sbjct: 50   MASTTGHEP---EWSAVKVRKTFIEYFEKNGHTFVPSGSVVPLSDPTLLFTNAGMNQFKA 106

Query: 105  IFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK 164
            IFLGT D ++  +KL RA N+QKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK
Sbjct: 107  IFLGTVDRDSDFAKLKRAANSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFK 166

Query: 165  NEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWL-KFLPASRVLPFGC 223
             EAI+ +W+LLTKVY L  DRLY TYF G   AGL PD EARD WL + +P   +L    
Sbjct: 167  EEAIQLSWQLLTKVYGLQPDRLYVTYFEGKADAGLDPDTEARDFWLAQGVPEDHILTGDM 226

Query: 224  KDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLK 283
            KDNFWEMGD GPCGPCSEIHYDR G R+A+ LVN DDP  IEIWN VFIQ+NRE D SLK
Sbjct: 227  KDNFWEMGDQGPCGPCSEIHYDRIGGRNASHLVNQDDPNVIEIWNNVFIQYNREPDKSLK 286

Query: 284  PLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKV 343
             LP KHVDTG+GFERL SILQNK SNYDTDVF P+F  IQ+ TGAR Y GK G +DAD V
Sbjct: 287  SLPNKHVDTGMGFERLVSILQNKPSNYDTDVFTPLFARIQEITGAREYQGKFGEEDADGV 346

Query: 344  DMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLV 402
            D AYRVVADH+R L+FAI+DG  P N GR YV+RR+LRR  RY  +      G FF+ LV
Sbjct: 347  DTAYRVVADHVRLLTFAISDGGVPNNVGRGYVVRRVLRRGARYARKYFNTDIGSFFSKLV 406

Query: 403  NIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG---KVLSG 459
              +V+ MGD+FPE+K+++  ++EI+  EE SF KTL +G   F+K AQ+ +    K L+G
Sbjct: 407  PTLVEQMGDMFPEIKKKQDEVKEILDEEEVSFAKTLDRGESMFEKYAQNCKSSGTKTLAG 466

Query: 460  QDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIV-MD 518
             D + L+DTYGFP+DLT+LM +ERGL +  +    A ++ARE S+    K+AG  +V +D
Sbjct: 467  ADVWRLYDTYGFPVDLTRLMCDERGLEIIDKDVAEAQEKAREASKG--EKKAGATLVKLD 524

Query: 519  ADATAALHKR-GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESV--VP-GNEVGIVLAS 574
                + L     V  TDD+ KF    + K+ IKAIY   +FI+S   +P G + G++L  
Sbjct: 525  VHDISTLENMPDVPKTDDTPKF-QRDNIKATIKAIYHDRKFIKSTSEIPEGEQFGVILDK 583

Query: 575  SSFYAEQGGQIFDEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICK 632
            ++FYAEQGGQ  D G   I+G      V NVQ Y G+V+H G +  G+    VG+EV+ +
Sbjct: 584  TNFYAEQGGQENDTGRILIDGE-AEIKVDNVQQYAGYVMHTGYVEYGS--LKVGDEVLSE 640

Query: 633  VDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRR 692
             D  RR+ I  NHT TH+LN+ALREVLGD V+QKGS+V PEKLRFDFSH   V  E L +
Sbjct: 641  YDELRRQPIRNNHTGTHILNYALREVLGDDVNQKGSLVAPEKLRFDFSHKAGVTDEELAK 700

Query: 693  IESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPE 752
            IE +    I+   +VFSK+  LA A+ ING+RAVFGE YPDPVRVV++G  VEDLL +P 
Sbjct: 701  IEEVSTNYIRQNFEVFSKDVPLATARQINGVRAVFGETYPDPVRVVSVGMAVEDLLENPS 760

Query: 753  NKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLE 812
            + +W  IS E CGGTH+ +T E +   ++ E GIAKGIRRI AVT   A++    A   E
Sbjct: 761  DPKWNDISIEFCGGTHVKSTTEIKDLVVVEESGIAKGIRRIVAVTGAEAHRVQAIAQEWE 820

Query: 813  KEVD--------------------DASKIEGSLLEKNQVRKAQKKVAEENL------QKA 846
            K+V                     D SK++ S L+K  +R     VA+ NL      QKA
Sbjct: 821  KQVSALEKLPYGPDKEAKTKQLTTDLSKLDISALQKTSLRNRVAAVAKANLDQQKTAQKA 880

Query: 847  --VKVATETAEAAASN-GKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTN 903
               KV  E      SN G    +  V V     +++E + KV++ K     V+   +T +
Sbjct: 881  ESKKVLDEVTNHFVSNAGSTTLVLAVPVSAGGKSIQETI-KVVQTKQKDKTVYLLGKTDD 939

Query: 904  KAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLA 963
              V+         Q+K  + ++W ++ +  L G    GKG  + GQGTDA +V  A++ A
Sbjct: 940  GKVIHGCHVSADAQAKGADAAKW-SSEVSSLVGGKAGGKGATSLGQGTDATKVGEAVEAA 998

Query: 964  AEFAA 968
             ++ A
Sbjct: 999  QKYLA 1003


>gi|255713044|ref|XP_002552804.1| KLTH0D01848p [Lachancea thermotolerans]
 gi|238934184|emb|CAR22366.1| KLTH0D01848p [Lachancea thermotolerans CBS 6340]
          Length = 955

 Score =  867 bits (2240), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 450/932 (48%), Positives = 598/932 (64%), Gaps = 47/932 (5%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           +W A+ VR TF +FF+ + H    SSPV+P +DPTLLFANAGMNQYKPIFLGT DP++  
Sbjct: 8   KWTASNVRSTFMEFFKQREHTFVASSPVIPYDDPTLLFANAGMNQYKPIFLGTVDPSSDY 67

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
             L RA N+QKCIRAGGKHNDL+DVG+D+YHHTFFEMLGNWSFGDYFK +AI+++WELLT
Sbjct: 68  YSLKRAMNSQKCIRAGGKHNDLEDVGRDSYHHTFFEMLGNWSFGDYFKKDAIQYSWELLT 127

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
           KVY +P++RLY TYF GD+K GL PD EA ++W    +    +LP   KDNFWEMGD GP
Sbjct: 128 KVYGIPSERLYVTYFEGDQKQGLEPDLEAFELWKSVGVSEDHILPGNAKDNFWEMGDQGP 187

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPCSEIHYDR G R+AASLVN DDP  +E+WNIVFIQ+NRE +G+LK LP+KH+DTG+G
Sbjct: 188 CGPCSEIHYDRIGGRNAASLVNMDDPNVLEVWNIVFIQYNREQNGTLKSLPSKHIDTGMG 247

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
           FERL S+LQ+  SNYDTDVF P+F  IQ+ TGARPY GK GA+DAD +D AYRV+ADH+R
Sbjct: 248 FERLVSVLQDVKSNYDTDVFQPLFARIQEITGARPYEGKFGAEDADGIDTAYRVLADHVR 307

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFP 414
           TL+FA+ADG  P NEGR YVLRRILRR  RY  + +    G FF+ L   ++     +FP
Sbjct: 308 TLTFALADGGVPNNEGRGYVLRRILRRGARYARKYMNYPIGNFFSSLAPTLIDQSKAMFP 367

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTYGF 471
           E+ +  +++ EI+  EEASF KTL +G    EK+ +AA   + K L G   + L+DTYGF
Sbjct: 368 EINRDPSYLFEILDEEEASFAKTLDRGEKLFEKYAQAAAQTKDKTLDGLQVWRLYDTYGF 427

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           P+DLT+LMAEE+GL +D  GF  A  E+ E S+    K A   I ++    + L+   V 
Sbjct: 428 PVDLTELMAEEKGLKIDGPGFEKAKQESYEASKKGGKKSASDLIKLEVHELSTLNSENVP 487

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVP-GNEVGIVLASSSFYAEQGGQIFDEG- 589
            TDDS K+    + ++++  I+ G  F++ +   G + G++L S+ FYAEQGGQ +D G 
Sbjct: 488 KTDDSPKY-ESANIEAIVLRIFDGENFVDEISEVGKQYGVILDSTCFYAEQGGQEYDMGT 546

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
            +      F V NVQ+Y G+V H G L  G G+ SVG++VI   D  RR  I  NHT TH
Sbjct: 547 LVIDDVAEFSVENVQLYNGYVFHTGQL--GEGKLSVGDKVIASFDELRRFPIKNNHTGTH 604

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +LNFAL+EVLG+ VDQKGS+V PEKLRFDFSH K V  + L+ +E I NEQIKA L V+ 
Sbjct: 605 ILNFALKEVLGNDVDQKGSLVAPEKLRFDFSHKKAVALDELKEVERICNEQIKANLPVYY 664

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
           K   L  A+ I+ +RAVFGE YPDPVRVV++G+ V+D+L DP ++EW   S E CGGTH+
Sbjct: 665 KNVPLDLARKISSVRAVFGETYPDPVRVVSVGKPVDDMLVDPTSEEWQKYSVEFCGGTHV 724

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKN 829
           S T + + F ++ E GIAKG RRI AV+   AY+    A   + ++  A K+  S L++ 
Sbjct: 725 SKTGDIKEFVIIEESGIAKGTRRIVAVSGSEAYEVQRIANKFDSDLIAAEKMPFSPLKEK 784

Query: 830 QVR------------------------KAQKKVAEENLQKAVKVATETAEA-----AASN 860
           +++                        K +K V +E   +A K   +T +      A + 
Sbjct: 785 KLKELGVALGQLSISVVTKQELKDKFAKIEKVVKDEIKTRAKKEIKQTVDEVKNYFAENQ 844

Query: 861 GKPFCISRVEVGLDAAAVREAVLKV-IEQKGMPVMVFSTDETTNKAVVCAGVP-EKSDQS 918
              F +  + +  +A A+ EAV  +    K   + +F+ D+        + V  EK    
Sbjct: 845 EASFLVKYINIPTNAKAITEAVNHMKTSAKDKSIYLFTGDDRVAHGCYISDVALEKGIDG 904

Query: 919 KQLEVSEWLTAALQPLKGRCGKGKGGLASGQG 950
           + L     L      + G+ G GKG +  G G
Sbjct: 905 RAL-----LNTVSSNIGGKAG-GKGNVFQGVG 930


>gi|392564303|gb|EIW57481.1| hypothetical protein TRAVEDRAFT_21080 [Trametes versicolor
           FP-101664 SS1]
          Length = 978

 Score =  867 bits (2239), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 472/975 (48%), Positives = 617/975 (63%), Gaps = 76/975 (7%)

Query: 56  VEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQ 115
            +W A+KVR+ FF +F+++ H    SS  +P +DPTLLFANAGMNQYK IFLGT DP ++
Sbjct: 7   TDWSASKVREEFFNYFKNREHTFVPSSSTIPYDDPTLLFANAGMNQYKGIFLGTVDPQSE 66

Query: 116 LSKLTRACNTQKCIRAGGKHNDLDD--------------------VGKDTYHHTFFEMLG 155
           L++L RA N+QKCIRAGGKHND                       VGKD+YHHTFFEMLG
Sbjct: 67  LARLKRAFNSQKCIRAGGKHNDHSQFAALAKIEAAGAWSLATDTYVGKDSYHHTFFEMLG 126

Query: 156 NWSFGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LP 214
           NWSFGDYFK EAIE++WELLT+VY LP D+LY TYF GD KAGL PD EA+D WLK  + 
Sbjct: 127 NWSFGDYFKKEAIEYSWELLTEVYGLPKDQLYVTYFEGDPKAGLEPDLEAKDWWLKTGVA 186

Query: 215 ASRVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQF 274
              ++P   KDNFWEMG TGPCGPCSEIHYDR G R+AA  VN DDP  +EIWN VFIQF
Sbjct: 187 EDHIIPGNAKDNFWEMGATGPCGPCSEIHYDRIGGRNAAGHVNQDDPDVLEIWNNVFIQF 246

Query: 275 NRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGK 334
           NRE DGSLKPLPAKHVDTG+GFERL S++Q+K SNYDTDVF PIF  IQ+ TG RPY GK
Sbjct: 247 NREDDGSLKPLPAKHVDTGMGFERLVSVVQDKRSNYDTDVFQPIFARIQEVTGVRPYGGK 306

Query: 335 VGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQ 394
            G +D + +D AYRV+ADH+RTL+FA++DG  P N GR YVLRRILRR  R+  + L  Q
Sbjct: 307 FGDEDENGIDTAYRVIADHVRTLTFALSDGGVPNNVGRGYVLRRILRRGARFARKKLGVQ 366

Query: 395 DG-FFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV- 452
            G FF+ LV +VV+ MG VFPE+ Q+ A I+EI+  EE SF +TL +G + F++ AQ   
Sbjct: 367 IGSFFSSLVPVVVEQMGAVFPEITQKSAEIKEILDEEEESFSRTLDRGEKLFEQYAQKTL 426

Query: 453 --QGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQ 510
               K LSG+D + L+DTYGFP+DLT+LMAEE GL ++   F  A   ++E S+    K 
Sbjct: 427 QSGQKELSGKDVWRLYDTYGFPVDLTRLMAEELGLSINEAEFEAAQAHSKEASKGGVKKG 486

Query: 511 AGGAIVMDADATAALHKR-GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESV--VPGN- 566
            G  + +D    AAL K  GV  TDDSFKF        V+ AIY+   F++S   +P   
Sbjct: 487 TGEVVALDVHDIAALEKNDGVPKTDDSFKFKQGNITAKVV-AIYSKKAFLKSTEEIPEEA 545

Query: 567 EVGIVLASSSFYAEQGGQIFDEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFS 624
             G++L  +SFYAE GGQ +D G   I+G+   F V NVQ+Y G+V+HIG +    G+ +
Sbjct: 546 SFGLLLDRTSFYAESGGQEYDTGSIVIDGV-AEFEVTNVQVYNGYVLHIGHMK--YGKLN 602

Query: 625 VGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKP 684
           +G+E++   D  RR  +  NHT TH+LN++LREVLGDH+DQKGS+V P KLRFDFSH   
Sbjct: 603 IGDEIVSSYDELRRWPLRNNHTATHILNYSLREVLGDHIDQKGSLVAPTKLRFDFSHKAQ 662

Query: 685 VDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKV 744
           V    L +IESI  + IK  + V+ KE  L  A+ IN LRAVFGE YPDPVRVV++   V
Sbjct: 663 VSTSELTKIESISQDFIKRNVGVYGKELPLHVAQKINSLRAVFGESYPDPVRVVSLEFDV 722

Query: 745 EDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKA 804
           +D+  D EN +W   S ELCGGTH++ T E + F +  E GIAKGIRR+ AVT   A +A
Sbjct: 723 DDIAKDLENPKWRKTSIELCGGTHVARTGEIKDFVVTEESGIAKGIRRVVAVTGHEAAEA 782

Query: 805 FEAACSLEKEVD------DASK-------------IEGSLLEKNQVRKAQKKVAEENLQK 845
                SL  +++      DA K             ++ +LL+KN++R     V     +K
Sbjct: 783 RRLGESLTAQLNRIESMPDAEKDAALKAYTVHIGQVDIALLKKNELRDRLTSV-----RK 837

Query: 846 AVKVATETAEAAASNGK--------------PFCISRVEVGLDAAAVREAVLKVIEQKGM 891
           A     +  EAAA+                 P   + ++V  +A  ++  VL+  ++ G 
Sbjct: 838 AFDKHLKDKEAAANKASVDALQQYFKDKPDAPAYFAALDVNANAKVMQGVVLQA-KKLGK 896

Query: 892 PVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGT 951
            + +FS D++  K      V E++ + K L+  EW +A ++ L G+ G GK   A G G 
Sbjct: 897 SIYIFSADQSAGKVAHVNAVSEEA-KGKGLDGREWASAVVEILGGKAG-GKPDGAQGVGA 954

Query: 952 DAAQVTPAMDLAAEF 966
           + ++V  A+  A +F
Sbjct: 955 EVSKVQDALAAAQKF 969


>gi|332020821|gb|EGI61219.1| Alanyl-tRNA synthetase, cytoplasmic [Acromyrmex echinatior]
          Length = 1010

 Score =  867 bits (2239), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 468/1010 (46%), Positives = 628/1010 (62%), Gaps = 67/1010 (6%)

Query: 20   LLNPSLTLAVTNHHHSLISRFSASAVAAMPGADPQVVEWPATKVRDTFFKFFEDKNHVNW 79
            ++   L     N  +   S  SAS + +            A ++R  +  FF+ K H   
Sbjct: 4    IIEMQLQQTANNQDNDGSSLNSASGIMSSASNTDHSNNMNAKQIRQAYIDFFKSKGHEYV 63

Query: 80   KSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLD 139
             SS  +P +DPTLLF NAGMNQ+KPIFLGT DPN+ ++K  R  N+QKCIRAGGKHNDLD
Sbjct: 64   HSSSTIPHDDPTLLFTNAGMNQFKPIFLGTVDPNSDMAKWVRVVNSQKCIRAGGKHNDLD 123

Query: 140  DVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGL 199
            DVGKD YHHTFFEM+GNWSFGDYFKNE   WAWE LT V +LPADRLY TYFGGDEK+GL
Sbjct: 124  DVGKDVYHHTFFEMMGNWSFGDYFKNEICAWAWEFLTDVLKLPADRLYVTYFGGDEKSGL 183

Query: 200  APDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNN 258
            APD+E +++WL   +PAS VLP   KDNFWEMG+TGPCGPCSE+HYDR G R+AA LVN 
Sbjct: 184  APDDECKNLWLSLGVPASHVLPGNMKDNFWEMGETGPCGPCSELHYDRIGGREAAHLVNM 243

Query: 259  DDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPI 318
            DDP  +EIWN+VFIQ+NRE +GSLK LP KH+D GLG ERL S++QNK +NYDTDVFMP+
Sbjct: 244  DDPDVLEIWNLVFIQYNRELNGSLKSLPKKHIDCGLGLERLVSVIQNKRANYDTDVFMPL 303

Query: 319  FDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRR 378
            F AI++ TGA PY GKVGADD + +DMAYRV+ADH RTL+ A+ADG  P N GR YVLRR
Sbjct: 304  FAAIEEGTGAPPYQGKVGADDVNGIDMAYRVLADHARTLTIALADGGVPDNTGRGYVLRR 363

Query: 379  ILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTL 438
            ILRRAVRY +E L A+ GFF  LVN+VV ++GDVFPE+++    I EII  EE+ F KTL
Sbjct: 364  ILRRAVRYATEKLNAKQGFFGSLVNVVVDLLGDVFPEVRKDPQSIIEIINEEESQFLKTL 423

Query: 439  LKGIEKFKKAAQDVQ-GKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMD 497
             +G     +    ++    + G  A+ L+DTYGFP+DLTQLM EE+GL +DI G+    +
Sbjct: 424  SRGRNLLNRTIAKLESADTVPGDVAWRLYDTYGFPIDLTQLMTEEKGLKIDIAGY----E 479

Query: 498  EARERSRSAQNKQAGGA---IVMDADATAALHKRGVLATDDSFKF-------IWFQDHK- 546
            E++++++     +AGG    I  D  A   L K+GV  TDDS K+       I +++++ 
Sbjct: 480  ESKKQAQLISQNKAGGVDDQINFDVHAITELQKQGVKPTDDSPKYDYKVTTEIKYKEYEF 539

Query: 547  ----SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGF---IEGLFGSFY 599
                  + A+     F++ V  G EVGI+L  ++FYAEQGGQI+DEGF   ++       
Sbjct: 540  APCTGTVIALRRAKTFVDEVSSGEEVGILLDRTNFYAEQGGQIYDEGFLVKVDDETTEIR 599

Query: 600  VRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVL 659
            ++NVQI  G+V+HIG++ EG  R   G++V   VD +RR+ +  NH+ TH+LN+ALR+VL
Sbjct: 600  IKNVQIRAGYVLHIGTVGEGTLR--KGDKVHTNVDTERRRFVMANHSATHVLNYALRKVL 657

Query: 660  GDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKC 719
            G   DQKGS+V P++LRFDF++  P+    L+  E + N  I     +++KE+ LA AK 
Sbjct: 658  GTKADQKGSLVAPDRLRFDFTNKGPMTGGQLQDTEQLANNVITENEKIYAKESNLAIAKT 717

Query: 720  INGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFA 779
            I GLRA+F E YPDPVRVV++G  VE+L  DP +   L  S E CGGTHL  T     F 
Sbjct: 718  IQGLRAMFEETYPDPVRVVSVGIPVENLEKDPLSTAALETSVEFCGGTHLHYTSHIGNFT 777

Query: 780  LLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV--------DDAS------------ 819
            ++SE+ IAKGIRRI A+T   A KA      L++++        DD S            
Sbjct: 778  IVSEDAIAKGIRRIVALTGPEAAKALRTGMLLQRQLSQFQASIEDDKSETNSKEYVREIV 837

Query: 820  ----KIEGSLLE-------KNQVRKAQKKVAEENLQKAVKVATETAEAAAS--NGKPFCI 866
                +I  +L+        +N ++  +K + ++       VAT   + A S    K  C 
Sbjct: 838  ELTEEISHALIPAYWKDHMRNTLKNLKKSLDDKERAAKATVATTVVQTAQSIIESKVGCQ 897

Query: 867  SRVEVGLDAAAVREAVLKVIEQ-----KGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQL 921
              VEV L+A +  +A+ + +++          ++ S D    K    + VP KS  SK L
Sbjct: 898  VLVEV-LEAYSNTKALDQALKKIRAISPETSALLISIDHDVKKIFALSSVP-KSAVSKGL 955

Query: 922  EVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
            + +EW+ A    ++G+ G GK   A   G++   +   +  A EFA  KL
Sbjct: 956  KANEWIQAITSLMQGKGG-GKSESAQASGSNIVCLNEIVSKANEFADQKL 1004


>gi|383858758|ref|XP_003704866.1| PREDICTED: LOW QUALITY PROTEIN: alanine--tRNA ligase,
           cytoplasmic-like [Megachile rotundata]
          Length = 1206

 Score =  867 bits (2239), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 456/979 (46%), Positives = 605/979 (61%), Gaps = 77/979 (7%)

Query: 56  VEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQ 115
           V   A +VR  +  FF+ K H    SS  +P +DPTLLF NAGMNQ+KPIFLGT DPN+ 
Sbjct: 3   VTMNAKQVRQAYIDFFKSKGHEYVHSSSTIPHDDPTLLFTNAGMNQFKPIFLGTVDPNSD 62

Query: 116 LSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELL 175
           ++K  R  N+QKCIRAGGKHNDLDDVGKD YHHTFFEM+GNWSFGDYFK E   WAWE L
Sbjct: 63  MAKWVRVVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMMGNWSFGDYFKKEICTWAWEFL 122

Query: 176 TKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTG 234
           T   RLPADRLY TYFGGDEK  L  D E + IWL   +  + +LP   KDNFWEMG+TG
Sbjct: 123 TVKLRLPADRLYVTYFGGDEKNNLDSDEECKAIWLSLGVSPNHILPGNMKDNFWEMGETG 182

Query: 235 PCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           PCGPCSEIHYDR GNR+AA LVN DDP  +EIWN+VFIQFNRESDGSLK LP KH+D GL
Sbjct: 183 PCGPCSEIHYDRIGNREAAHLVNQDDPDVLEIWNLVFIQFNRESDGSLKSLPKKHIDCGL 242

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           G ERL S++QNK +NYDTD+F+P+FDAIQ+ TGA PY GKVG DD D +DMAYRV+ADH 
Sbjct: 243 GLERLVSVIQNKQANYDTDLFIPLFDAIQKGTGAPPYQGKVGIDDKDGIDMAYRVLADHA 302

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++ A++DG  P N GR YVLRRILRRAVRY +E L A+ GFF  LVN+VV+++GD FP
Sbjct: 303 RTITIALSDGGVPDNTGRGYVLRRILRRAVRYATEKLNAKPGFFGTLVNVVVEILGDTFP 362

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ-GKVLSGQDAFILWDTYGFPL 473
           E+ +   +I + I  EE  F KTL +G     +    ++   +L G  A+ L+DTYGFP+
Sbjct: 363 EVTKDPQYIIDTINEEEEQFLKTLSRGRNLLHRTIAKLESSNILPGDIAWRLYDTYGFPV 422

Query: 474 DLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA---IVMDADATAALHKRGV 530
           DLTQLM EE+GL +D+ G+    +EA+++++     + GG    I +D  A   L  +G+
Sbjct: 423 DLTQLMTEEKGLKIDMAGY----EEAKKQAQLISQNKCGGVDDQINLDVHAITELQNKGI 478

Query: 531 LATDDSFKFIW------------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFY 578
             T+D  K+ +            F      + A+     F++ V  G EVGI+L  ++FY
Sbjct: 479 KPTNDLPKYNYTVTGNKLYEEYEFAPCTGTVIALRRNKTFVDEVSSGEEVGILLDQTNFY 538

Query: 579 AEQGGQIFDEGFI---EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDY 635
           AEQGGQI+DEGF+   +       ++NVQ+ GG+V+HIG++  G G     ++V   VD 
Sbjct: 539 AEQGGQIYDEGFLVKTDDEDTEVRIKNVQVRGGYVLHIGTV--GQGTLKKNDKVYLNVDT 596

Query: 636 DRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIES 695
            RR+ +  NHT TH+LN+ALR+VLG  VDQKGS+V P++LRFDF++   +  E ++R+E 
Sbjct: 597 TRRRFLMSNHTATHVLNYALRKVLGTEVDQKGSLVAPDRLRFDFTNKGAMTSEQVKRVEE 656

Query: 696 IVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKE 755
           I N  +K    V++KE++LA AK I GLRA+F E YPDPVR+V+IG  VE+L  DP    
Sbjct: 657 ITNSVVKENKKVYAKESSLALAKTIQGLRAMFEETYPDPVRIVSIGIPVEELEKDPLGPA 716

Query: 756 WLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV 815
               S E CGGTHL  T+  E F + SEE IAKGIRRI A+T   A KA + A  L+  +
Sbjct: 717 ATQTSVEFCGGTHLHYTKHMEDFIIASEEAIAKGIRRIVALTGPEATKAQKKAAVLQNHL 776

Query: 816 ---------------------------DDASKIEGSLLEKNQVRKAQKKVAEENLQKAVK 848
                                      DD S+   S  +K+ +RK  K     +L+K + 
Sbjct: 777 EQLQTTIANDKNGTNSKEYVKKIVELTDDVSRATISSWKKDNMRKMLK-----DLKKMLD 831

Query: 849 VATETAEAAASN--------------GKPFCISRVEVGLDAAAVREAV--LKVIEQKGMP 892
               +A+AA +N              G P  +  ++   +  A+  A+  +K I  +   
Sbjct: 832 DKERSAKAAIANAVVDTIQQIIQQNVGCPVLVETLQAYSNTKALDSALKKIKAISPETSA 891

Query: 893 VMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTD 952
           ++V + D   NK +    +  KS  +K L+ +EW+      +KG+ G GK   A   GT+
Sbjct: 892 LLV-TVDPDANK-IFALSMASKSAINKGLKANEWIQEIAPLMKGK-GGGKPESAQASGTN 948

Query: 953 AAQVTPAMDLAAEFAAMKL 971
            + +T  +  A  FA  KL
Sbjct: 949 ISCLTKLIHTAKNFANSKL 967


>gi|353240909|emb|CCA72755.1| probable ALA1-alanyl-tRNA synthetase, cytosolic [Piriformospora
           indica DSM 11827]
          Length = 967

 Score =  865 bits (2236), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 468/961 (48%), Positives = 601/961 (62%), Gaps = 54/961 (5%)

Query: 53  PQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQ-------YKPI 105
           P    W A KVR T+ +FFE K H  W SS  +P  DPTLLFANAGMNQ       YK +
Sbjct: 5   PYSGPWTANKVRKTYIEFFEGKGHTFWPSSSTIPFEDPTLLFANAGMNQACLSRPIYKAV 64

Query: 106 FLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKN 165
           FLGT DPN+ +SKL RA N+QKCIRAGGKHNDL+DVG+D+YHHTFFEMLGNWSFGDYFK 
Sbjct: 65  FLGTVDPNSDMSKLKRAVNSQKCIRAGGKHNDLEDVGRDSYHHTFFEMLGNWSFGDYFKR 124

Query: 166 EAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCK 224
           EA+ WAWELLT+VY+LPADRLY +YF GD K GL PD E + IWL   +P  R++    K
Sbjct: 125 EALSWAWELLTEVYKLPADRLYVSYFEGDPKQGLLPDEETKQIWLDMGVPEDRIVKGNAK 184

Query: 225 DNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKP 284
           DNFWEMG TGPCGPCSEIHYDR G R+AA +VN DDP  +EIWN VFIQ+NRE DGSLK 
Sbjct: 185 DNFWEMGATGPCGPCSEIHYDRIGGRNAAHIVNADDPNVVEIWNNVFIQYNREEDGSLKS 244

Query: 285 LPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVD 344
           LPAKHVDTG+GFERL S +Q+ +SNYDTDVF PIFD IQ+ +GARPY+GK GADD D +D
Sbjct: 245 LPAKHVDTGMGFERLVSAIQDVLSNYDTDVFRPIFDRIQEVSGARPYTGKFGADDVDGID 304

Query: 345 MAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVN 403
            AYRVVADH+RTL+FA++DG  P N GR YVLRRILRR  RY  + L  Q G FF+ +  
Sbjct: 305 TAYRVVADHVRTLTFALSDGGIPSNVGRGYVLRRILRRGARYARKKLGVQIGSFFSSVSP 364

Query: 404 IVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQ 460
           ++V+ +GD FPELK+    +++++  EEASF +TL +G    + +    ++  G VL G+
Sbjct: 365 VLVQQLGDFFPELKRSPEEVKKLLDEEEASFARTLDRGERLFDGYVAKTREGGGTVLDGK 424

Query: 461 DAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDAD 520
           D + L+DTYGFP+DLT+LMAEE  L VD E F  A   ++E S+ A    A   + +D  
Sbjct: 425 DVWRLYDTYGFPVDLTRLMAEELNLTVDEEAFLAAQAHSKEASKGAGKVGAKDTVKLDVH 484

Query: 521 ATAALHKR-GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESV--VP-GNEVGIVLASSS 576
              AL     V  T+DSFKF       + IKAIY    F  S   +P G   GI+L  + 
Sbjct: 485 DIGALENNPDVTITNDSFKF-HTGSVSATIKAIYYDKNFPSSTADIPAGAPFGIILDQTC 543

Query: 577 FYAEQGGQIFDEGFIEGLF----GSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICK 632
           FYAE GGQ +D G I          F V N Q + G+V+HIG + EG+   SVG+ VI  
Sbjct: 544 FYAEAGGQEYDTGSIASDVKDQEAKFEVVNCQSFKGYVLHIGQMEEGS--LSVGDSVIAT 601

Query: 633 VDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRR 692
            D DRR+ I  NHT TH+LN+ LREVLGDH+DQKGS+V P KLRFDFSH   V    L++
Sbjct: 602 YDPDRRRPIRSNHTATHILNYGLREVLGDHIDQKGSLVAPSKLRFDFSHKAQVTTSELQK 661

Query: 693 IESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPE 752
           IE I  + IK ++ VFSKE  L  A+ I GLRAVFGE YPDPVRVV +   V+++  D E
Sbjct: 662 IEEICIDWIKKDVPVFSKELDLKSARVIPGLRAVFGETYPDPVRVVTLEYDVDEIAKDLE 721

Query: 753 NKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVT-------------TG 799
           N +W   S E CGGTH++ T + + F ++ E GIAKGIRRI AVT               
Sbjct: 722 NPKWRGTSVEFCGGTHVAKTGDIKEFTIMEESGIAKGIRRIIAVTGPEAREAIASAAAFE 781

Query: 800 LAYKAFEAACSLEKE------VDDASKIEGSLLEKNQVRK---AQKKVAEENLQKAVKVA 850
             + + +     EK+        D ++ +   + K  +R    A++K+ +  ++     A
Sbjct: 782 ARFTSVQNLSGREKDEGFKSLTLDLNQADLPAVHKADLRDRVAAKRKIWDAEVKARETAA 841

Query: 851 TETAEAAASN---GKPFCI---SRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNK 904
           T+ A  A S      P  +   ++V+VG +  A+ +A+L   +  G  V V S DE T K
Sbjct: 842 TKAAVEAVSKYFEENPNALGYFAQVDVGSNVKAI-QAILGQGKTLGKAVYVLSVDEQTGK 900

Query: 905 AVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAA 964
                 +P  S  +   +   W T+  + + G+ G GK   A G GTD A+ +  + +A 
Sbjct: 901 VTHGNYLP-ASFAASGFDARSWATSVSEVIGGKAG-GKPDTAQGVGTDIAKASEGLKVAE 958

Query: 965 E 965
           E
Sbjct: 959 E 959


>gi|300121464|emb|CBK21983.2| unnamed protein product [Blastocystis hominis]
          Length = 935

 Score =  865 bits (2236), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 465/960 (48%), Positives = 595/960 (61%), Gaps = 73/960 (7%)

Query: 55  VVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNT 114
            +EWP+ KVR TF +FFE++ H   KSSPVVP++DPTLLFANAGMNQYKPIFLG  DP++
Sbjct: 6   TLEWPSAKVRQTFIEFFEERGHTFVKSSPVVPLDDPTLLFANAGMNQYKPIFLGQVDPSS 65

Query: 115 QLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWEL 174
            L+KL RACN+QKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFGDYFK  AI +AWEL
Sbjct: 66  PLAKLKRACNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKEGAINFAWEL 125

Query: 175 LTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTG 234
           LTKVY+L   RLYATYF G E+ G+  D EA  IW   LP   +L     DNFWEMG+ G
Sbjct: 126 LTKVYKLDPSRLYATYFEGSEEDGVPCDEEAYAIWRTHLPDDHILKGNKHDNFWEMGEVG 185

Query: 235 PCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           PCGPCSEIHYDR G R+AA LVN DDP  +EIWN+VF+QF+R+S G+L PLPAKHVDTG+
Sbjct: 186 PCGPCSEIHYDRIGGRNAADLVNKDDPNVLEIWNLVFMQFSRDSTGALHPLPAKHVDTGM 245

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFER+TSILQNKMSNYDTDVF+P+F AI   +G   Y+G V   +  + DMAYRVVADHI
Sbjct: 246 GFERITSILQNKMSNYDTDVFLPLFKAIHAVSGVSEYTGLVAGQNGAQKDMAYRVVADHI 305

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RTL+ AI DG+ P N GR YVLRRILRR VRYG ++LK + GFF+ LV  VV+ M   FP
Sbjct: 306 RTLTMAITDGAAPSNTGRGYVLRRILRRGVRYGQQILKCKPGFFSQLVPTVVENMKSAFP 365

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ---GKVLSGQDAFILWDTYGF 471
           EL+++   ++E+I  EE SF +TL KG+++F + A+  Q    KV++G  AF L+ T GF
Sbjct: 366 ELEEKMCFVQEVILDEELSFNRTLEKGLKRFAQEAEACQASGAKVITGDVAFFLYGTLGF 425

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGG---AIVMDADATAALHKR 528
           P+DLT+LMAEE GL VD+EGFN A++ AR  +++  NK+ G     +VM+A+  + L K 
Sbjct: 426 PIDLTELMAEEAGLKVDMEGFNQAIERARMEAKT--NKKNGAEQTTLVMEAEQVSHLQKS 483

Query: 529 GVLATDDSFKFIWFQDHKSVIKAIYTGSE-FIESVVP-GNEVGIVLASSSFYAEQGGQIF 586
           GV  TDD  K+ WF+  +S + A Y   + F E + P    VG+VL  + FYAE  GQI 
Sbjct: 484 GVPVTDDLPKYTWFETLESEVVAFYGADKSFPEQIAPESGVVGVVLKQTPFYAESEGQIA 543

Query: 587 DEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
           D G + G  GSF V+ V  YGG+V+HIG + +G  R    + V C VDYD R LIAPNHT
Sbjct: 544 DRGSLSGANGSFSVQQVLSYGGYVLHIGVVEQGTLRLH--DAVTCSVDYDYRLLIAPNHT 601

Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD 706
            TH++N+ALR VL   VDQKGS+V  +KLRFDF+H K V P  L  IE +VNE++   L 
Sbjct: 602 LTHVMNWALRRVLQTEVDQKGSLVDDQKLRFDFNHTKAVSPAQLSEIERLVNEKVHDALK 661

Query: 707 VFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGG 766
           VF+K   + EA+ I  LRAVFGE                     P N  W+  S E CGG
Sbjct: 662 VFTKVCPIDEARKICSLRAVFGEA------------------GYPSNPRWMDYSVEFCGG 703

Query: 767 THLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLL 826
           THLSN  +A+ FA++ E  I+KGIRRI A+T   A ++   A  ++  +  A  + G  L
Sbjct: 704 THLSNLAQAKFFAIVEEGSISKGIRRIVAITGDRANESIVLANQIDGMLSHARSLHGKEL 763

Query: 827 E-----------------------KNQVRKAQKKVAEE-------NLQKAVKVATETAEA 856
           E                       K +++K +K +  E        L+ A+  A +  + 
Sbjct: 764 EAAVAELQQTIPTAVISVATKATFKEELKKLEKTMMAERKEQIAKQLESAIAEAEKVVKE 823

Query: 857 AASNGKPFCISRVEVGLDAAAVREAVLKVIE-QKGMPVMVFSTDETTNKAVVCAGVPEKS 915
                +   +     G+D++   + + K+ E        +FS D  T K  + A V  K 
Sbjct: 824 VKEKQEGGRVFYTVEGIDSSNASKLMQKIRELDSESSYFIFSVD--TAKVAMYALVA-KE 880

Query: 916 DQSKQLEVSEWLTAALQPLKGRCGKGKGG----LASGQGTDAAQVTPAMDLAAEFAAMKL 971
             SK      W++     +   CG GKGG     A GQ  D + V  A   A E     L
Sbjct: 881 KASKTFSAKTWISE----VAAVCG-GKGGGSPMQAQGQSKDPSNVEAAFAKAEEILKANL 935


>gi|409044874|gb|EKM54355.1| hypothetical protein PHACADRAFT_258158 [Phanerochaete carnosa
           HHB-10118-sp]
          Length = 951

 Score =  865 bits (2234), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 475/955 (49%), Positives = 609/955 (63%), Gaps = 53/955 (5%)

Query: 58  WPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLS 117
           W +T+VR+ FFKFF D+ H    SS  +P  DPTLLFANAGMNQ+KPIFLGT DP+++L+
Sbjct: 5   WSSTRVREEFFKFFRDREHTFVPSSSTIPYEDPTLLFANAGMNQFKPIFLGTVDPHSELA 64

Query: 118 KLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTK 177
           KL RA N+QKCIRAGGKHNDL+DVGKD+YHHTFFEMLGNWSFGDYFK EAI ++W+LLT+
Sbjct: 65  KLNRAFNSQKCIRAGGKHNDLEDVGKDSYHHTFFEMLGNWSFGDYFKKEAIGYSWKLLTE 124

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWL-KFLPASRVLPFGCKDNFWEMGDTGPC 236
           VY L  DRLY TYF GD K GL PD EAR +WL + +P   VLP   KDNFWEMG TGPC
Sbjct: 125 VYGLSKDRLYVTYFEGDSKNGLEPDLEARQLWLDQGVPEDHVLPGNAKDNFWEMGATGPC 184

Query: 237 GPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGF 296
           GPCSE+HYD  G R+ A LVN DDP  +EIWN VF+QFNRE DGSLKPLPAKHVDTG+GF
Sbjct: 185 GPCSEVHYDLVGGRNVAHLVNQDDPLVVEIWNNVFMQFNREDDGSLKPLPAKHVDTGMGF 244

Query: 297 ERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRT 356
           ER+ + +Q K+SNYDTDVF PIF  IQ+ TG RPY GK GA+D D +D AYRV ADH+RT
Sbjct: 245 ERIVTAVQGKISNYDTDVFSPIFARIQELTGVRPYQGKFGAEDTDGIDTAYRVCADHVRT 304

Query: 357 LSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFPE 415
           L+FAI+DG  P N GR YVLRRILRR  RY  + L A  G FF+ L+ +VV+ MG VFPE
Sbjct: 305 LTFAISDGGVPNNVGRGYVLRRILRRGSRYARKKLGAPIGSFFSSLIPVVVEQMGGVFPE 364

Query: 416 LKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK---VLSGQDAFILWDTYGFP 472
           L +R   ++EI+  EE SF +TL +G + F +  Q  Q +    LSG+D + L+DTYGFP
Sbjct: 365 LTKRVDEVKEILDEEEESFSRTLDRGEKLFDQYVQKAQERGETKLSGKDVWRLYDTYGFP 424

Query: 473 LDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQ--NKQAGGAIVMDADATAALHKR-G 529
           +DLT+LMAEE    VD E F  A  +++E S++ +  NK+    + +D    AAL K   
Sbjct: 425 VDLTRLMAEELRFTVDEEEFELAQAQSKEASKAIKKINKE---TVKLDVHDIAALEKNIS 481

Query: 530 VLATDDSFKFIWFQDHKSVIKAIYTGSEFIESV--VPGNEV-GIVLASSSFYAEQGGQIF 586
           V  TD+S KF+      S + A+Y    F  S   +P N + G++L  +SFYAE GGQ  
Sbjct: 482 VPKTDESAKFLR-GSIDSRVAALYYNKTFPASTEQIPENALFGVLLDKTSFYAESGGQEH 540

Query: 587 DEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           D G   ++G+   F V +VQ+Y G+V+HIG L  GA   S+G +V+   D  RR  +  N
Sbjct: 541 DTGSIVVDGV-AEFEVSDVQVYNGYVLHIGQLKYGA--LSIGNQVVSIYDELRRWPLRNN 597

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           HT TH+LN++LRE LGDH+DQKGS+V P KLRFDFSH   +    L RIES+  + I+  
Sbjct: 598 HTATHVLNYSLREALGDHIDQKGSLVAPTKLRFDFSHKAQIPAPELERIESMSQDWIRRN 657

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
           + VF KE  L  A+ I GLRAVFGE YPDPVRVV++   V++++ D EN +W S S E C
Sbjct: 658 VKVFGKEVDLKLAQKIPGLRAVFGESYPDPVRVVSLEYDVDEIVQDIENPKWRSTSVEFC 717

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGS 824
           GGTH++ T E + F +  E GIAKGIRRI AVT   A +    A  L+  +D    ++G 
Sbjct: 718 GGTHVNKTGEIKDFVITEESGIAKGIRRIVAVTGNEAAEVRRVADGLKVRLDQLEVMQGK 777

Query: 825 -------------------------LLEK-NQVRKA---QKKVAEENLQKAVKVATETAE 855
                                    LLE+ + VRK    QKK  E    KA   +  T  
Sbjct: 778 EKDAGLKAYQVELNQADISLIFKSRLLERLSTVRKTFEKQKKDKEAAANKAAIDSLITYF 837

Query: 856 AAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKS 915
               N + FC + ++V  +A  ++  VL+  ++ G  V VFS D    K      V E +
Sbjct: 838 EENRNAQVFC-ANLDVDGNAKVLQSVVLQA-KKLGKSVYVFSVDSEQGKVAHANFVAEDA 895

Query: 916 DQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMK 970
            +S+ ++  EW TA +  L G+ G GK   A G G D  +VT A+ +A +F   K
Sbjct: 896 -KSRGIDGREWATAVVDVLGGKAG-GKVDGAQGVGLDGTKVTEALKVAQDFYLQK 948


>gi|219125523|ref|XP_002183027.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217405302|gb|EEC45245.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 959

 Score =  865 bits (2234), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 472/973 (48%), Positives = 615/973 (63%), Gaps = 71/973 (7%)

Query: 52  DPQVVEWPATKVRDTFFKFFED--KNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGT 109
           D   V W   KVR TF  FFE   ++H   +SS   P+NDPTLLF NAGMNQ+KP+FLG 
Sbjct: 2   DTDTVVWTTDKVRSTFIDFFEQEPRSHTFQRSSACAPLNDPTLLFTNAGMNQFKPVFLGQ 61

Query: 110 ADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIE 169
            DPN+ L+ + RA N+QKCIRAGGKHNDL+DVG+DTYHHTFFEMLG+WSFGDYFK EAI+
Sbjct: 62  VDPNSPLANVQRAVNSQKCIRAGGKHNDLEDVGRDTYHHTFFEMLGSWSFGDYFKKEAID 121

Query: 170 WAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWE 229
           +AW+LLT+VYRL  DRLYATYF GD+  GLAPD EARD+WL++LPA+RV+    +DNFWE
Sbjct: 122 YAWQLLTEVYRLDPDRLYATYFQGDDALGLAPDFEARDLWLRYLPAARVIGCDVRDNFWE 181

Query: 230 MGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKH 289
           MG+ GPCGPCSEIHYDR GNRDAA+ VN DDP  IEIWNIVFIQ+NRE D  L+ LPAKH
Sbjct: 182 MGEVGPCGPCSEIHYDRIGNRDAAAFVNADDPQVIEIWNIVFIQYNREPD-KLQTLPAKH 240

Query: 290 VDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRV 349
           +DTG+G ERL SILQNK SNYD DVF P+F  +   T   PY+G+VG DD D  D AYR 
Sbjct: 241 IDTGMGLERLVSILQNKDSNYDIDVFQPLFAKLATHTDRGPYTGRVGTDDVDLKDTAYRA 300

Query: 350 VADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVM 409
           +ADH RTL+FAIADG+ P NEGR YVLRRILRRA RYG ++L    GFF  L+ +VV+  
Sbjct: 301 IADHARTLAFAIADGAVPNNEGRGYVLRRILRRATRYGQQILHCAPGFFATLIPVVVETF 360

Query: 410 GDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVL--SGQDAFILW 466
           G+ +PEL+  E+ I EI+  EE +FG  L +GI+ F +   ++ + KVL  SG+ AF ++
Sbjct: 361 GETYPELRAAESTILEIVQEEEQAFGDMLDRGIKFFTELEGELKENKVLEISGEKAFFMY 420

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNK-QAGGAIVMD--ADATA 523
           DT GFP+DLT+LMA+E GL VD+ GF NAM+  + RSR AQ   +AG A V++  A+ TA
Sbjct: 421 DTLGFPVDLTELMAQEAGLSVDMAGFANAMETQKTRSRQAQKTARAGNAPVLELVAEQTA 480

Query: 524 ALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFI---ESVVPGNEVGIVLASSSFYAE 580
            L  + VL TDD FK+ W     + + A+Y    F+    +   G+ VGIVL  SSFYAE
Sbjct: 481 WLVDQNVLPTDDGFKYKWDVQLPATVMALYGKDGFLTGDSTADQGDFVGIVLDKSSFYAE 540

Query: 581 QGGQIFDEGFIEGL------FGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVD 634
            GGQ  D G +E L       G F V +VQ+Y GF++H G++ EG+   +V + V CKVD
Sbjct: 541 AGGQEADVGTLEFLDEAGTITGRFTVTDVQVYAGFLLHKGAVEEGS--IAVDQAVNCKVD 598

Query: 635 YDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIE 694
           Y+RR++IAPNH+ TH+LN ALR VLG+  DQ+GS+   EKLRFDF+H + +    ++ +E
Sbjct: 599 YERRRMIAPNHSMTHVLNAALRNVLGEKCDQRGSLCNNEKLRFDFAHKRAMTMLEIKAVE 658

Query: 695 SIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENK 754
               + +     V SK  +LA+A+ I+G+RAVFGEVYPDPVRV+AIG             
Sbjct: 659 EFCQKSVADAQPVKSKVMSLADAQAIDGVRAVFGEVYPDPVRVIAIGD------------ 706

Query: 755 EWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKE 814
              S S E CGGTHL NT EAEAF L+ E  +AKGIRR+TAVT   A +A       +  
Sbjct: 707 ---SSSVEFCGGTHLENTAEAEAFVLVEETAVAKGIRRVTAVTKDAAKRALAGGVKFQAL 763

Query: 815 VDDASKIEGSL--LEK--------------NQVRKAQKKVAEE------------NLQKA 846
           VD   ++  +   L K              + V KA+ +   E             LQ+ 
Sbjct: 764 VDKIEQLPATTSGLYKQAGSARKDLDAAFVSAVLKAELRTRLEAIQKKANDAAKKALQQR 823

Query: 847 VKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIE--QKGMPVMVF-----STD 899
           V +     +   +      +  + + +D AA  +A  +V+   ++  P M F     +  
Sbjct: 824 VDLVLNDVKKDVAVALEEKMQTLVLNVDIAADSKASQRVMNTVKEIAPEMAFLGVSEAES 883

Query: 900 ETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPA 959
            +  K +  A VP++  +   L   EW+ A L+   GR G   G  A GQ  D A V+  
Sbjct: 884 GSGGKIMAFAVVPDRLMEEFDLRADEWIRATLESCGGRGGGKPGS-AQGQAQDCADVSGV 942

Query: 960 MDLAAEFAAMKLR 972
           MD A  FA+ K++
Sbjct: 943 MDAANAFASSKVQ 955


>gi|50310341|ref|XP_455190.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49644326|emb|CAG97897.1| KLLA0F02431p [Kluyveromyces lactis]
          Length = 956

 Score =  865 bits (2234), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 450/932 (48%), Positives = 600/932 (64%), Gaps = 44/932 (4%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           +W A  VR TF  +F+ K H    SSPV+P +DPTLLFANAGMNQYKPIFLGT DP++  
Sbjct: 8   KWTAANVRSTFLDYFKSKGHTFVPSSPVIPFDDPTLLFANAGMNQYKPIFLGTVDPSSDF 67

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
            KL RA N+QKCIRAGGKHNDL+DVG+D+YHHTFFEMLGNWSFGDYFK EAIE++WELLT
Sbjct: 68  YKLKRATNSQKCIRAGGKHNDLEDVGRDSYHHTFFEMLGNWSFGDYFKKEAIEYSWELLT 127

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
           KVY +P DRLY TYF GDEK GL PD EARD+W    +    +LP   KDNFWEMG+ GP
Sbjct: 128 KVYGIPGDRLYVTYFEGDEKLGLEPDFEARDLWKSVGVKDDHILPGNAKDNFWEMGEQGP 187

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPCSE+HYDR G R+AA LVN DDP  +EIWN VFIQFNRE D SL+ LPAKHVDTG+G
Sbjct: 188 CGPCSEVHYDRIGGRNAAHLVNQDDPDVLEIWNNVFIQFNREQDRSLRALPAKHVDTGMG 247

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
           FERL S+L +  SNYDTDVF P+F+ IQ+ TG R Y+GK GA+D D +D AYRV+ADH+R
Sbjct: 248 FERLVSVLHDVRSNYDTDVFEPLFNRIQEITGVRSYTGKFGAEDTDGIDTAYRVLADHVR 307

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFP 414
           TL+FA+ADG  P NEGR YVLRRILRR  RY  + +    G FF+ L   +++ + D+FP
Sbjct: 308 TLTFALADGGVPNNEGRGYVLRRILRRGARYARKYMNYPIGNFFSQLSVTLIEQVKDMFP 367

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV---QGKVLSGQDAFILWDTYGF 471
           E+ +  +++ EI+  EEASF KTL +G + F+K A+D      K L G+  + L+DTYGF
Sbjct: 368 EVARDPSYLFEILDEEEASFAKTLDRGEKLFEKYAEDALKKADKTLDGKQVWRLYDTYGF 427

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           P+DLT+LMAEE+GL +D  GF  A  E+ E S+    K A   I ++    + L+   V 
Sbjct: 428 PVDLTELMAEEQGLKIDTIGFEKAKQESYEASKKGGKKGASDLIRLNVHELSQLNGDNVA 487

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVP-GNEVGIVLASSSFYAEQGGQIFDEG- 589
            TDDS K+   ++ ++ I  IY G +F++S+   G + G++L  + FYAEQGGQ FD G 
Sbjct: 488 KTDDSSKY-GTENVEATILRIYDGEKFVDSMTEIGKQYGVILDKTCFYAEQGGQEFDTGK 546

Query: 590 -FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
             I+G    F V NVQ Y G+V H GSL  G G+ S+G+ +I   +  RR  +  NHT T
Sbjct: 547 LVIDGE-AEFNVDNVQAYNGYVFHTGSL--GDGKLSIGDSIIASYEELRRHPLRNNHTGT 603

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+LNFAL+EVLG+ VDQKGS+V PEKLRFDFSH + +  E L  +E + NE+I+  L V+
Sbjct: 604 HILNFALKEVLGNDVDQKGSLVAPEKLRFDFSHKRALSYEELVEVEKLSNEKIRDNLTVY 663

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
            KE  L  AK I+ +RAVFGE YPDPVRVV+IG+ VE++L +P ++EW   S E CGGTH
Sbjct: 664 YKEVALDLAKTISSVRAVFGETYPDPVRVVSIGKAVEEVLENPTSEEWQKYSIEFCGGTH 723

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLE- 827
           ++ T + + F ++ E GIAKGIRRI AV+   AY+    A   + E+    K+  S L+ 
Sbjct: 724 VAKTSDIKEFVIVEESGIAKGIRRIVAVSGPEAYEVQRIATEFDGELTAVEKLPFSPLKA 783

Query: 828 -----------------------KNQVRKAQKKVAEENLQKAVKVATETAEAA-----AS 859
                                  K++  K +K+V +E   +A K   +T +       A+
Sbjct: 784 QKLKELGVRLGQLTISVITKTDLKDKFNKIEKEVKDELKSRAKKEIKQTLDDVKHHFDAN 843

Query: 860 NGKPFCISRVEVGLDAAAVREAVLKV-IEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQS 918
               F +  +++  +A A+ EA+  +    K   + +F+ +E   K      + + +  +
Sbjct: 844 KESSFYVKHIDIPTNAKAITEAINHIKTNSKDKSIYLFTCNEPDGKVAHGCYISDAA-IA 902

Query: 919 KQLEVSEWLTAALQPLKGRCGKGKGGLASGQG 950
           + ++ S         + G+ G GKG +  G G
Sbjct: 903 QGVDGSSLAKTVSSSIGGKAG-GKGNVFQGMG 933


>gi|348503890|ref|XP_003439495.1| PREDICTED: alanyl-tRNA synthetase, cytoplasmic-like [Oreochromis
           niloticus]
          Length = 966

 Score =  864 bits (2233), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 471/969 (48%), Positives = 613/969 (63%), Gaps = 69/969 (7%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R  F  FF    H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  +++L
Sbjct: 7   AAQIRQKFIDFFCRYEHQYVHSSSTIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMARL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A + A ELLT+ +
Sbjct: 67  HRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +P +RLY TYFGG+E AGL PD E + IW+   +  +R+LP   KDNFWEMGDTGPCGP
Sbjct: 127 GIPLERLYVTYFGGNEDAGLEPDLECKQIWMDLGVDEARILPGSMKDNFWEMGDTGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G RDA+ LVN DDP  +EIWN+VFIQFNRES+  LKPLP K +DTG+G ER
Sbjct: 187 CSEIHYDRIGGRDASHLVNMDDPNVLEIWNLVFIQFNRESETELKPLPKKSIDTGMGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+F+P F+AIQ+ TGARPY+GKVGA+DAD +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFIPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A++DG  P N GR YVLRRILRRAVRY  E L AQ GFF  LV++VV  +G+ FPELK+
Sbjct: 307 IALSDGGRPDNTGRGYVLRRILRRAVRYSHEKLGAQRGFFASLVDVVVDSLGEAFPELKK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKF-KKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQ 477
               +++II  EEA F KTL +G     +K       K + G  A++L+DTYGFPLDLT 
Sbjct: 367 DPEMVKDIINEEEAQFLKTLSRGRRILDRKIMSLADTKTIPGDTAWLLYDTYGFPLDLTS 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
           L+AEE+G+ VD+ GF      A+ +S   Q K AG    I++D  A   L  + + ATDD
Sbjct: 427 LIAEEKGMEVDLAGFEEEKKAAQLKS---QGKGAGDEDHIMLDIYAIEELRNKQIPATDD 483

Query: 536 SFKFIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           S K+ +         FQ   + + A+     F + V  G E G+VL  +SFYAEQGGQ F
Sbjct: 484 SPKYNYTSDENGNYQFQQASATVLALRRDRAFCDEVTTGQECGVVLDQTSFYAEQGGQTF 543

Query: 587 DEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           DEG++     S      F V+N Q+ GG+V+H+G++    G   VG+ V   VD  RR+ 
Sbjct: 544 DEGYLLREDDSTEDRMEFSVKNTQVRGGYVLHVGTVY---GTLKVGDRVTLHVDEARRRP 600

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           I  NHT TH+LNFALR VLG+  DQ+GS+V P++LRFDF+    +  + +RR E I    
Sbjct: 601 IMSNHTATHILNFALRGVLGE-ADQRGSLVAPDRLRFDFTAKGALSTDEIRRTEEIACTM 659

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           IK    V++ EATLAEAK I GLRAVF E YPDPVRVV+IG  V +LLADP +      S
Sbjct: 660 IKDAKTVYAMEATLAEAKAIQGLRAVFDETYPDPVRVVSIGIPVPELLADPNSAAGSLTS 719

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSL--------- 811
            E CGGTHL N+  A  F ++SEE IAKGIRRI AVT   A KA   A +L         
Sbjct: 720 IEFCGGTHLQNSGHAAPFVIVSEEAIAKGIRRIVAVTGTEAQKAQRKADALRQSLSALGD 779

Query: 812 ------------EKEVDDASKIEGSLL----EKNQVR---KAQKKVAEE-------NLQK 845
                       +KE+ D ++  G+ +    +K+++R   K  KK  ++       ++QK
Sbjct: 780 KVKQQTSPNKDTQKEIADMTESIGTAVISQWQKDEMRETLKGLKKTMDDLDRNYKADIQK 839

Query: 846 AVKVATETAEAAASN-GKPFCISRVEVGLDAAAVREAVLKVIEQKG--MPVMVFSTDETT 902
             +V  +T E   SN  +P  +  +E G  A A+ E+ LK+++ +      M+F+ D   
Sbjct: 840 --RVLEKTKEVIESNPNQPLLVMEMETGASAKALNES-LKLLKSQSPQTAAMLFTVDPDA 896

Query: 903 NKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDL 962
            K      VP+    ++ L+ S+W+      L G+ G GK   A   G +   +  A+ +
Sbjct: 897 GKITCLCQVPQDV-ANRGLKASQWVQELCPLLDGK-GGGKDMSAQATGRNTQCLQEALQM 954

Query: 963 AAEFAAMKL 971
           A EFA +KL
Sbjct: 955 ANEFARLKL 963


>gi|367004358|ref|XP_003686912.1| hypothetical protein TPHA_0H02750 [Tetrapisispora phaffii CBS 4417]
 gi|357525214|emb|CCE64478.1| hypothetical protein TPHA_0H02750 [Tetrapisispora phaffii CBS 4417]
          Length = 956

 Score =  864 bits (2232), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 426/785 (54%), Positives = 549/785 (69%), Gaps = 12/785 (1%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           +W A  VR TFF +F+ K H    SS VVP +DPTLLF NAGMNQYKPIFLGT DP++  
Sbjct: 8   KWMAKNVRQTFFDYFKSKGHTYVPSSSVVPFDDPTLLFTNAGMNQYKPIFLGTVDPSSDF 67

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
           + L RA N+QKCIRAGGKHNDL+DVG+D+YHHTFFEMLGNWSFGDYFK EAI +AWELLT
Sbjct: 68  ATLKRAYNSQKCIRAGGKHNDLEDVGRDSYHHTFFEMLGNWSFGDYFKKEAIAYAWELLT 127

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
            VY LPADRLY TYF GD + GL PD EA+D+WL   +    ++P    DNFWEMG+ GP
Sbjct: 128 VVYGLPADRLYVTYFEGDAQQGLEPDLEAKDLWLAVGVSEDHIIPGNSHDNFWEMGEQGP 187

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPCSE+HYDR G R+AA LVN DDP  +EIWN+VF+Q+NRE D SLK LPAKH+DTG+G
Sbjct: 188 CGPCSEMHYDRIGGRNAAHLVNMDDPDVLEIWNLVFMQYNREQDRSLKSLPAKHIDTGMG 247

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
           FERL SILQ+  SNYDTDVF P+F  IQ+ TG RPYSGK GA+D D +D AYRV+ADH+R
Sbjct: 248 FERLVSILQDVRSNYDTDVFQPLFVKIQEITGVRPYSGKFGAEDVDGIDTAYRVLADHVR 307

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFP 414
           TL+FAI DG  P NEGR YVLRRILRR  RY  + +    G FF+ L   +++ + ++FP
Sbjct: 308 TLTFAITDGGIPNNEGRGYVLRRILRRGARYARKYMNYPIGNFFSTLAPTLIEQVKEIFP 367

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTYGF 471
           ++ +  A + EI+  EEASF KTL +G    EK+ +AA   Q K+L G   + L+DTYGF
Sbjct: 368 QVTKDPAFLFEILDEEEASFAKTLDRGEKLFEKYAEAAAKSQTKILDGLQVWRLFDTYGF 427

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           P+DLT+LMAEE+GL +D EGF  A  E+ E S+    K     + ++    + L++  V 
Sbjct: 428 PVDLTELMAEEQGLKIDEEGFEKAKQESYEASKRGGKKDNFDMLKLNVHELSQLNELKVP 487

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVV-PGNEVGIVLASSSFYAEQGGQIFDEG- 589
            TDDS K+I   D +SVI ++Y G  F++S+   G + G++L  +SFYAEQGGQ +D G 
Sbjct: 488 KTDDSAKYIS-TDAESVILSLYDGETFVDSISEAGKKYGVILDKTSFYAEQGGQEYDTGK 546

Query: 590 -FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
             I+G    F V NVQ+Y G+V H G+L EG    + G++ I   D +RR  I  NHT T
Sbjct: 547 IIIDGE-AEFQVDNVQLYNGYVFHTGTLIEGT--LNKGDKTISSHDEERRLPIKNNHTGT 603

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+LN ALR+ LG+ VDQKGS+V PEKLRFDFSH K +  + LR++E I N+QIK  L V+
Sbjct: 604 HILNLALRQTLGNDVDQKGSLVAPEKLRFDFSHKKALSLDELRKVEEIANDQIKKNLPVY 663

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
            K+  L  AK I+ +RAVFGE YPDPVRVV++G+ VEDLLADP N+EW   S E CGGTH
Sbjct: 664 YKDVPLELAKGISSVRAVFGETYPDPVRVVSVGKTVEDLLADPTNEEWNKYSVEFCGGTH 723

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEK 828
           +  T + + F +L E GIAKGIRRI AV+   A++    A   ++E++   ++  S  ++
Sbjct: 724 VPKTGDIKFFVILEESGIAKGIRRIVAVSGAEAFEVQRIANEFDEELNKTEQLPFSQAKE 783

Query: 829 NQVRK 833
            ++++
Sbjct: 784 KKLKE 788


>gi|256077790|ref|XP_002575183.1| alanyl-tRNA synthetase [Schistosoma mansoni]
          Length = 980

 Score =  863 bits (2231), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 463/980 (47%), Positives = 617/980 (62%), Gaps = 77/980 (7%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R  FF+FFE K HV   SS  +P NDPTLLFANAGMNQYKPIF GT DPN++L +L
Sbjct: 7   AKELRKQFFEFFESKGHVYVHSSSTIPHNDPTLLFANAGMNQYKPIFQGTVDPNSELGRL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R+ N+QKCIRAGGKHNDLDDVG+D YHHTFFEMLGNWSFGDYFK EA EWAWELLT+V+
Sbjct: 67  KRSYNSQKCIRAGGKHNDLDDVGRDVYHHTFFEMLGNWSFGDYFKKEACEWAWELLTEVW 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
           ++P++RLY TYFGGD   GL  D EARDIW+   LP   VLPFG K+NFWEMG+TGPCGP
Sbjct: 127 KIPSERLYVTYFGGDISNGLPADEEARDIWISIGLPKDHVLPFGMKENFWEMGETGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G+RDAA LVN DDP  +EIWN+VFIQFNRE  GSLKPLPAKH+DTG+GFER
Sbjct: 187 CSEIHYDRVGDRDAAHLVNQDDPDVLEIWNLVFIQFNREEGGSLKPLPAKHIDTGMGFER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           + S+LQNK SNYDTD+F+P+F  I+  T  RPY+GKVG +D DK+DMAYRV+ADH R L+
Sbjct: 247 VLSVLQNKRSNYDTDLFVPLFKTIEAGTNTRPYTGKVGVEDTDKIDMAYRVLADHARVLT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ DG    N GR YV+RRILRRAVR+  EVL A+ GF   LV+IV++ +GD FPE+ +
Sbjct: 307 IALGDGGRAQNTGRGYVIRRILRRAVRFAVEVLNAKPGFLATLVDIVIETLGDTFPEITR 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK-----VLSGQDAFILWDTYGFPL 473
               I+E+I  EE  F  TL +G   F +  +D++        LSG+ A+ L++TYGFPL
Sbjct: 367 DPDTIKELINEEEEQFLVTLKRGRRFFDRVIKDLKASGSNNTTLSGEVAWGLYETYGFPL 426

Query: 474 DLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIV-MDADATAALHKRGVLA 532
           DLTQ++AEE  L +D+ G+  A +EA+ RS+S   K  GG+I+ +   A A L  + +  
Sbjct: 427 DLTQILAEEHHLKIDLNGYEKAKEEAQIRSQS--RKCTGGSIIDLTVHALAELKSKNISV 484

Query: 533 TDDSFKFIW---------FQDHKSVIKAIYTGSEFIESV-VPGNEVGIVLASSSFYAEQG 582
           TDDS KF++         F D ++ + AI   ++F+ESV +     GI+L  + FYAE G
Sbjct: 485 TDDSEKFVYTSDLNGNYVFPDSEATVLAILYENKFVESVDLSSQMCGIILNKTIFYAESG 544

Query: 583 GQIFDEGFIEGL---FGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRK 639
           GQ++D GFI  L      F V +VQ  GG+++HIG+L    G+  VG  V+  +D  RR 
Sbjct: 545 GQLYDHGFITSLTDEVTEFSVSDVQCRGGYILHIGNL---HGKLIVGNRVLLSLDTVRRT 601

Query: 640 LIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNE 699
            +  NHT TH+LNFALRE++ D  +QKGS+V P++LRFDF+  + +  + L + E I + 
Sbjct: 602 ALMRNHTGTHVLNFALRELV-DESEQKGSLVAPDRLRFDFTAKRGMTRDELAKAEEICDT 660

Query: 700 QIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSI 759
            I   L+V+S   +L+ AK I G+RAVFGE YPDPVRVV+IG  V  L+ADPE     + 
Sbjct: 661 MISKRLNVYSSNVSLSYAKTIQGVRAVFGEAYPDPVRVVSIGVPVTSLVADPETGYGKTT 720

Query: 760 SAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDAS 819
           S E CGGTH+ NT+      ++SEE I+KG+RRI A+T   A +A + A  L+ EV++  
Sbjct: 721 SVEFCGGTHVLNTKHIGVLVIVSEEAISKGVRRIIALTGHEAERAQKEALRLDNEVNEFI 780

Query: 820 KIEGSLLEKNQ---------------------------VRKAQKKVAEENLQKAVKV--- 849
           K+    +  +Q                           + +  ++   E L KA K+   
Sbjct: 781 KLVNQSISLHQNHNNNITDDFNINRQMSNLSEHVSRAVISQHHRENLREKLFKAKKLLDA 840

Query: 850 ---ATETA-------------EAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQ--KGM 891
              A++TA             E+ A++   + I   +   +   +  A+ K IE+     
Sbjct: 841 RDKASKTAITSKVLEEARLLGESLANSPSNYIIHVFDAQSNTKIMNSAI-KEIERICPNK 899

Query: 892 PVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGT 951
            VMV S+D T+ K  V   VP K   S+ L+    +T   + + G+ G GK   A   G+
Sbjct: 900 AVMVISSDLTSKKLTVLCQVP-KVLFSRGLKAMNGVTHISKTMDGK-GGGKENSAQAVGS 957

Query: 952 DAAQVTPAMDLAAEFAAMKL 971
               +   + LA  FA  KL
Sbjct: 958 RIDTLDEVIHLADIFANTKL 977


>gi|391342382|ref|XP_003745499.1| PREDICTED: alanine--tRNA ligase, cytoplasmic-like isoform 1
           [Metaseiulus occidentalis]
          Length = 965

 Score =  863 bits (2229), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 467/961 (48%), Positives = 617/961 (64%), Gaps = 56/961 (5%)

Query: 62  KVRDTFFKFFEDK-NHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLT 120
           +VR  F +FF+ K  H    SS V+P +DPTLLFANAGMNQYKPIFLGT DPNT+ +K  
Sbjct: 9   EVRTRFIEFFQKKYQHTFVPSSCVIPHDDPTLLFANAGMNQYKPIFLGTVDPNTEAAKWK 68

Query: 121 RACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYR 180
           R  N+QKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFGD+FK E   WAWE LTK + 
Sbjct: 69  RTVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDFFKKEICAWAWEFLTKEFG 128

Query: 181 LPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGPC 239
           L  DRLY TYFGG+ +AGL PDNE + IWL   +P   +LP   KDNFWEMG+TGPCGPC
Sbjct: 129 LAEDRLYVTYFGGNPEAGLEPDNECKGIWLALGVPEDHILPGSMKDNFWEMGETGPCGPC 188

Query: 240 SEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERL 299
           SEIH+DR G R+AA LVN DDP  +EIWN+VFIQ+NRE+D SL+PLP +HVDTG+GFERL
Sbjct: 189 SEIHFDRIGGRNAAHLVNMDDPDVLEIWNLVFIQYNREADSSLRPLPKQHVDTGMGFERL 248

Query: 300 TSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSF 359
            S++QNK SNYDTDVF+PIFDAIQ++TG R Y+GKVGA+D D +DMAYRV+ADH RTL+ 
Sbjct: 249 VSVIQNKRSNYDTDVFVPIFDAIQKSTGVRAYTGKVGAEDVDGIDMAYRVLADHARTLTI 308

Query: 360 AIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQR 419
           A++DG  P N GR YVLRRILRRA+RY +E + A+ G F GLV +VV ++GD FPELK+ 
Sbjct: 309 ALSDGGRPDNVGRGYVLRRILRRAIRYATEKMNAKPGMFAGLVPVVVGLLGDAFPELKKD 368

Query: 420 EAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ-GKVLSGQDAFILWDTYGFPLDLTQL 478
              + EII  EE  F KTL +G     KA   ++ G +L G+ A+ L+DTYGFP+DLTQL
Sbjct: 369 PDTVMEIINEEETQFLKTLSRGRRLLTKAVSKIEKGGLLPGEVAWRLYDTYGFPVDLTQL 428

Query: 479 MAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH-KRGVLATDDSF 537
           M EE G+ VD  G+  A   A   S+   +K A  +  +D  A A L  K+ + ATDDS 
Sbjct: 429 MVEESGIFVDSAGYEKAKQAAILASQGGADK-ADDSSKLDVHAIAELQDKQKLPATDDSP 487

Query: 538 KFIW------------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
           K+++            FQ     I AI +  +F+  V  G+  GIVL  ++FYAEQGGQI
Sbjct: 488 KYVYTAEGTGKSAKYTFQPCTGKIVAIRSKKQFVNGVNAGDLCGIVLDRTNFYAEQGGQI 547

Query: 586 FDEGFIEGLFG---SFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIA 642
           +D GF++ +      F V  V + GGFV+HIG L   AG   VG+E+  ++D  RR  + 
Sbjct: 548 YDTGFLQHVENEDVEFAVTEVHLQGGFVVHIGRL--AAGTLKVGDELKLQIDETRRVAVM 605

Query: 643 PNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIK 702
            NHT TH+LN+ALR+VL    DQ+GS+V PE++RFDF+  +P+  + +++ E    E + 
Sbjct: 606 QNHTGTHVLNYALRKVLSADADQRGSLVAPERMRFDFASNRPMTAQEVKQAEEAAVELVS 665

Query: 703 AELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAE 762
               V++K+++L++AK + GLRAVF E YPDPVRVV+IG  VEDLLA+P+  + L+ S E
Sbjct: 666 RNGPVYAKDSSLSQAKAVKGLRAVFNETYPDPVRVVSIGVSVEDLLANPDRGDALNTSVE 725

Query: 763 LCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIE 822
            CGGTHL N      F +  EE IAKGIRRI A+T   A KA + A  LE EV+    + 
Sbjct: 726 FCGGTHLQNAGHIGDFVIAQEEAIAKGIRRIMALTGTEAAKATKRAEHLESEVNTLKSLV 785

Query: 823 G---SLLE----------------------KNQVRKAQKKVAEENLQKAVKVATETAEA- 856
           G   SL++                      +++++K +K + +++ Q       E  E  
Sbjct: 786 GKDKSLVKRITELSDEISQSSISYWRKDDLRSELKKIKKVIDDQDKQNKAAAQMEALEEI 845

Query: 857 ----AASNGKPFCISRVEVGLDAAAVREAVLKVIE--QKGMPVMVFSTDETTNKAVVCAG 910
                  +  P+ I +++VG +  A+ +AV+K I         M+FS DE   + V  + 
Sbjct: 846 KRVLGQGDAPPYLIRKLQVGGNGKAL-DAVMKQIRTLSPNASAMLFSIDEEKKRLVCLSS 904

Query: 911 VPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMK 970
           VP++    K L  SEW+      + G+ G GK   A   GT+   ++ AM++A EFA +K
Sbjct: 905 VPKQVVADKGLSASEWVRHIADVIGGKGG-GKDESAQASGTNPEALSEAMNMAEEFAKLK 963

Query: 971 L 971
           L
Sbjct: 964 L 964


>gi|384491657|gb|EIE82853.1| alanyl-tRNA synthetase [Rhizopus delemar RA 99-880]
          Length = 955

 Score =  862 bits (2227), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 475/958 (49%), Positives = 614/958 (64%), Gaps = 46/958 (4%)

Query: 55  VVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNT 114
           + EWPA KVR TF KFFED  HV   SS  +P +DPTLLFANAGMNQ+KP+FLGT DPN+
Sbjct: 1   MTEWPANKVRSTFVKFFEDNGHVFVPSSSTIPHDDPTLLFANAGMNQFKPMFLGTLDPNS 60

Query: 115 QLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWEL 174
            L+ + RACN+QKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK EA ++ WE 
Sbjct: 61  PLANVKRACNSQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEATKFGWEF 120

Query: 175 LTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDT 233
           LTKV  LP DRLY TYFGGDEK GL  D EA+ +W+   +   R++P   KDNFWEMG+T
Sbjct: 121 LTKVINLPEDRLYVTYFGGDEKMGLPADLEAKQLWMDLGVEEKRLIPGNVKDNFWEMGET 180

Query: 234 GPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTG 293
           GPCGPCSEIHYDR G RDAASLVN DDP  +EIWN+VF+QFNRE+DGSL+PLP +H+DTG
Sbjct: 181 GPCGPCSEIHYDRIGGRDAASLVNMDDPNVLEIWNLVFMQFNREADGSLRPLPNQHIDTG 240

Query: 294 LGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADH 353
           LG ERL SILQNK SNYDTDVF P+FD I++ TGAR Y+GK+G +D D VD AYRV+ DH
Sbjct: 241 LGLERLVSILQNKYSNYDTDVFTPMFDKIKELTGARDYTGKLGEEDVDGVDTAYRVIGDH 300

Query: 354 IRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDV 412
           IRTL+FAI+DG  P NEGR YVLRRILRR  RY  +      G FF+ LV+ ++  M + 
Sbjct: 301 IRTLTFAISDGGVPSNEGRGYVLRRILRRGARYARKYFNVAIGSFFSSLVDTLISQMHEA 360

Query: 413 FPELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTY 469
           +PEL ++   I+ I+  EE +F KTL +G    E + K  ++    VLSG D + L+DTY
Sbjct: 361 YPELGKKANDIKAILDEEEVAFSKTLDRGEKLFEAYMKKTKESGSTVLSGDDVWRLYDTY 420

Query: 470 GFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAG-GAIVMDADATAAL-HK 527
           GFP+DLT++MAEE GL V+   F  A + A+ +SR  +    G G + +D     AL + 
Sbjct: 421 GFPVDLTRIMAEENGLEVNEAQFEAAQEAAKNKSRKVKGGDLGQGVVALDVHDLGALDND 480

Query: 528 RGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESV--VPGN-EVGIVLASSSFYAEQGGQ 584
             V  TDDS K++   + +  +KAI+   +F++S   +P +   G++L  ++FYAE GGQ
Sbjct: 481 DCVPKTDDSAKYLP-GNIQGKVKAIFFEHKFLKSTTEIPEDRNFGLLLDKTNFYAESGGQ 539

Query: 585 IFDEGFIEGLFGS--FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIA 642
            FD G I  L G+  F V++ Q+YGG+V+H+G L    G+ S+ E+V    D  RR  + 
Sbjct: 540 EFDIGSIITLDGNSEFAVQDCQLYGGYVLHVGHLK--YGQLSIDEDVEVSYDDTRRSPLR 597

Query: 643 PNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIK 702
            NHT TH+LNFALREVL D +DQKGS+V PEK RFDFS+  PV+ + L  IE+I N+ I 
Sbjct: 598 NNHTATHILNFALREVLQDDIDQKGSLVAPEKFRFDFSYKSPVNTKQLAEIENITNDFIN 657

Query: 703 AELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAE 762
               V+SKE  LA AK I+GLRAVFGE YPDPVRVV+IG  V+++  D  N  W + S E
Sbjct: 658 KNHQVYSKEVPLAVAKAIHGLRAVFGETYPDPVRVVSIGFDVDEITKDVSNPLWKTSSVE 717

Query: 763 LCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIE 822
            CGGTH++ T + + F ++ E GIAKGIRRI A+T   A KA   A +   +++   K+ 
Sbjct: 718 FCGGTHVAKTGDIKHFVIIEESGIAKGIRRIVALTGEAAVKAQREADTFVTKLERLEKLS 777

Query: 823 GSLLE----------KNQV-----------RKAQKKVAEENLQKA-----VKVATETAEA 856
           GS LE           N V           R AQ K A +N +K      VK ATE  +A
Sbjct: 778 GSQLEAELKVVSKEIDNAVISSVSKATFRDRFAQIKKAFDNAEKVRKAEQVKEATEKIKA 837

Query: 857 AASNG--KPFCISRVEVGLDAAAVREAV-LKVIEQKGMPVMVFSTDETTNKAVVCAGVPE 913
                    + I+ ++VG ++ A+  A+       K   V VFS D+ + + V    +  
Sbjct: 838 YFEENPEASYYIAELQVGNNSKALGGAINYAKANLKDKAVYVFSADKESGR-VAHNCIVG 896

Query: 914 KSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           K    K L+ SEW     + + G+ G      A G G     +  A+  A EFA +K+
Sbjct: 897 KVFIEKGLKASEWANVVCEKIGGKKGGKDDA-AQGSGDKIDGLPDALKAAEEFAKLKI 953


>gi|196003434|ref|XP_002111584.1| hypothetical protein TRIADDRAFT_23916 [Trichoplax adhaerens]
 gi|190585483|gb|EDV25551.1| hypothetical protein TRIADDRAFT_23916 [Trichoplax adhaerens]
          Length = 959

 Score =  862 bits (2227), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 460/973 (47%), Positives = 619/973 (63%), Gaps = 70/973 (7%)

Query: 52  DPQVVEWPATKVRDTFFKFFEDK-NHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTA 110
           DP +    + ++R  F  FF +K NH+   SS  VP +DPTLLFANAGMNQ+KPI+LGT 
Sbjct: 2   DPNLT---SEQIRQMFIDFFVEKYNHLFVPSSSTVPHDDPTLLFANAGMNQFKPIYLGTV 58

Query: 111 DPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEW 170
           DP ++++   R  N+QKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGD+FK E+I+W
Sbjct: 59  DPKSEMATYRRVVNSQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDFFKKESIDW 118

Query: 171 AWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWL-KFLPASRVLPFGCKDNFWE 229
           AWELL  VY++PA+R+Y TYFGGDEK+GL PD E ++IWL K +   RVLPFG +DNFWE
Sbjct: 119 AWELLVDVYKMPAERMYVTYFGGDEKSGLQPDYETKNIWLAKGIAPERVLPFGLQDNFWE 178

Query: 230 MGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKH 289
           MGDTGPCGPC+EIHYDR G RDAA LVN DDP  +E+WN+VF QFNRE+D SL+PLP K+
Sbjct: 179 MGDTGPCGPCTEIHYDRIGGRDAAYLVNMDDPEVLEVWNLVFTQFNREADKSLRPLPRKY 238

Query: 290 VDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRV 349
           VDTG G ER+TS++Q  MSNYDTD+F P+FD I+  TGAR Y G +G  D D +DMAYRV
Sbjct: 239 VDTGAGLERVTSVIQGVMSNYDTDLFKPLFDKIRSLTGAREYRGLLGDADVDGIDMAYRV 298

Query: 350 VADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVM 409
           +ADH RTL+ AI+DG  P + GR YVLRRILRRAVRY +E L A+ G F  LVN+ V+ +
Sbjct: 299 LADHARTLTIAISDGGKPDSTGRGYVLRRILRRAVRYATEKLDAKPGMFAQLVNVAVEKL 358

Query: 410 GDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTY 469
           G  FPE+ +    + +II  EEA F KTL +G   F++     +  VL G  A+ L+DTY
Sbjct: 359 GGAFPEVTKDPQMVIDIINEEEAQFLKTLSRGRRMFEREVLKAKDGVLPGFVAWRLYDTY 418

Query: 470 GFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRG 529
           GFP+DLT +MAEE+GL +D++G+  A  +++E SR  ++      + +   A   L    
Sbjct: 419 GFPVDLTHIMAEEKGLSIDMDGYEKAKQDSQELSR-GKDTGVDDTVALGIHAIKDLEDLA 477

Query: 530 VLATDDSFKFIWFQDHK---------SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAE 580
           +  TD S K+ +  D           + I A+     F+  V+ G+  GI+L  S FYAE
Sbjct: 478 IPLTDTSPKYNYESDGNGGYTIHGIAAKISALRYEKSFVNEVLTGSRCGIILDKSCFYAE 537

Query: 581 QGGQIFDEGFI---EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDR 637
           QGGQI+D GFI   +     F V +VQI GG+V+H+G +TEG   F VG+ V  +VD +R
Sbjct: 538 QGGQIYDLGFIVNSDDEDTEFKVTDVQIMGGYVLHVG-ITEGT--FKVGDTVQLQVDSER 594

Query: 638 RKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIV 697
           R+ +  NHT TH+LNFALRE LG+  DQ+GS+V P++LRFDF+    +  + ++  E IV
Sbjct: 595 RRTVMNNHTATHILNFALREQLGE-ADQRGSLVAPDRLRFDFTAKGAMTTQQIKATEEIV 653

Query: 698 NEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWL 757
              I+ +  VF+K+ATLA+A  I GLR VF E YPDPVR+V++G  V+DLL DP     L
Sbjct: 654 GNIIEQKQQVFAKDATLAKASAIQGLRQVFAETYPDPVRIVSVGVSVDDLLEDPTGPSGL 713

Query: 758 SISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAF----EAACSLEK 813
             S E CGGTHL N+ + EAF + SEE IAKGIRRI A+T   A K      E+   L K
Sbjct: 714 KTSVEFCGGTHLKNSGDMEAFVISSEEPIAKGIRRIIALTGSDAKKKVTKLQESLSELMK 773

Query: 814 -----------------EVDDA-SKIEGSLLEKNQVRKAQKKV---------------AE 840
                            E++D+ + +      K+++R+  KKV               ++
Sbjct: 774 LGRADQTSLKAKKRQITELNDSIAAVTLQQWRKDELRETLKKVKKTIIDIEKAADSKRSQ 833

Query: 841 ENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQ--KGMPVMVFST 898
           E ++KA ++A+++ + +A       +  +E GL ++ V ++ LK           M+FS 
Sbjct: 834 EVVEKAKEIASQSKDLSA------VVEVLEAGL-SSKVLDSALKQFHSIAPNTAAMLFSV 886

Query: 899 DETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTP 958
           D    +      VPE +   K L  S+W+ + +  L+G+ G GK   A G GT+ A +  
Sbjct: 887 DSEGRRVTCLCQVPE-AIMKKGLSASDWVKSVMNVLEGKGG-GKPTSAQGSGTNVAGLNN 944

Query: 959 AMDLAAEFAAMKL 971
           A++LA EFA MKL
Sbjct: 945 ALNLAKEFAKMKL 957


>gi|390601960|gb|EIN11353.1| hypothetical protein PUNSTDRAFT_141744 [Punctularia strigosozonata
           HHB-11173 SS5]
          Length = 956

 Score =  862 bits (2226), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 465/945 (49%), Positives = 600/945 (63%), Gaps = 46/945 (4%)

Query: 58  WPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLS 117
           W A  VR  FF +F  K H    SS  +P  DPTLLFANAGMNQ+K IFLGT DP+++++
Sbjct: 10  WTAPAVRSQFFDYFRSKGHTYVPSSSTIPYEDPTLLFANAGMNQFKAIFLGTVDPHSEMA 69

Query: 118 KLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTK 177
           K  R  N+QKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK EAI+++WELLT+
Sbjct: 70  KWKRVFNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIQYSWELLTE 129

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWL-KFLPASRVLPFGCKDNFWEMGDTGPC 236
           VY+LP DRLY TYF GD K GL PD EAR  WL + +    +LP   KDNFWEMG TGPC
Sbjct: 130 VYKLPKDRLYVTYFEGDAKNGLVPDEEARQYWLDQGVSEDHILPGNAKDNFWEMGATGPC 189

Query: 237 GPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGF 296
           GPCSEIH+DR G R+AA LVN DDP  +EIWN VFIQFNRE DGSLK LP+KHVDTG+GF
Sbjct: 190 GPCSEIHFDRIGGRNAAHLVNQDDPDVLEIWNNVFIQFNREEDGSLKHLPSKHVDTGMGF 249

Query: 297 ERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRT 356
           ERL S+LQ+  SNYDTDVF+PIFD +Q+ TG RPY GK GA+D D +D AYRVVADH+RT
Sbjct: 250 ERLVSVLQDVRSNYDTDVFLPIFDKVQELTGVRPYGGKFGAEDVDGIDTAYRVVADHVRT 309

Query: 357 LSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFPE 415
           L+ A++DG  P N GR YVLRRILRR  RY  + L  + G FF+ L+ +V++ MGD+FPE
Sbjct: 310 LTMALSDGGVPNNVGRGYVLRRILRRGARYARKKLGVEIGSFFSSLMPVVIEQMGDIFPE 369

Query: 416 LKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG---KVLSGQDAFILWDTYGFP 472
           +++R   I+EI+  EE SF +TL +G + F++ A   Q    K LSG+D + L+DTYGFP
Sbjct: 370 VRKRPDEIKEILDEEEESFSRTLDRGEKLFEQYATRTQQSGEKDLSGKDVWRLYDTYGFP 429

Query: 473 LDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR-GVL 531
           +DLT LMAEE GL V+   F  A   ++E S+++  K A   + +D    AAL     V 
Sbjct: 430 VDLTLLMAEELGLGVNQAEFEEAQAASKEASKASLKKGAADVVKLDVHDIAALETNPDVP 489

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIES---VVPGNEVGIVLASSSFYAEQGGQIFDE 588
            TDDS KF    +  + IKAIY   +F+ S   +  G   G++L  +SFYAE GGQ +D 
Sbjct: 490 KTDDSAKFNQ-GNITAEIKAIYYNKQFLPSSSGITEGTTFGLLLDRTSFYAEAGGQEYDT 548

Query: 589 G--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
           G   I+G+   F V NVQ + G+V+HIG L    G   VG +V+   D  RR  +  NHT
Sbjct: 549 GNIVIDGV-ADFEVTNVQTFNGYVLHIGHLK--YGNLEVGNQVVSSYDELRRWPLRNNHT 605

Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD 706
            TH+LNFALREVLGDH+DQKGS+V P KLRFDFSH   +  + L RIESI  + IK  + 
Sbjct: 606 ATHILNFALREVLGDHIDQKGSLVAPTKLRFDFSHKAAIASDELTRIESISKDWIKKNVK 665

Query: 707 VFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGG 766
           V+SKE  L  A  I GLRAVFGE YPDPVRVV +   VE++  D EN +W S S E CGG
Sbjct: 666 VYSKELDLKTAHRIPGLRAVFGESYPDPVRVVTLEYDVEEIAKDIENLKWRSTSVEFCGG 725

Query: 767 THLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGS-- 824
           TH++ T + + F +  E GIAKGIRR+ AVT   A  A   A  ++ ++D    ++G   
Sbjct: 726 THVAKTGDIKDFIITEESGIAKGIRRVIAVTGHEAAAANRCAEEMKAKLDRIEGLDGKEK 785

Query: 825 ------------LLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNG----------- 861
                        ++ + V K Q +     ++K     T+  EAAAS             
Sbjct: 786 DVALKTFPIELGQMDMSVVIKGQLRDRHAAIRKTFDKQTKDKEAAASKAAVEELTSHFDK 845

Query: 862 ---KPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQS 918
              +    + ++V  +   ++  VL+  ++ G  + VFS D+  +K V     P ++ +S
Sbjct: 846 NPSEGSYFANIDVNGNMKILQSVVLQG-KKLGKAIYVFSVDKEGSKVVHVNHSPAEA-RS 903

Query: 919 KQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLA 963
           K L+   W T   + L G+ G GK   A G GT+  +V  A+ +A
Sbjct: 904 KGLDARTWATKVAEVLGGKTG-GKEDGAQGVGTETDKVDEAIAVA 947


>gi|410925952|ref|XP_003976443.1| PREDICTED: LOW QUALITY PROTEIN: alanine--tRNA ligase,
           cytoplasmic-like [Takifugu rubripes]
          Length = 966

 Score =  862 bits (2226), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 469/967 (48%), Positives = 606/967 (62%), Gaps = 65/967 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R  F  FF    H    SS  VP++DPTLLFANAGMNQ+KPIFL T DP+  ++KL
Sbjct: 7   AAQIRQKFIDFFLRHEHSYVHSSATVPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A + A ELLT+ +
Sbjct: 67  RRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKQLACKMALELLTQEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +  DRLY TYFGG E+AGL  D E + +W+   +  +R+LP   KDNFWEMGDTGPCGP
Sbjct: 127 GISIDRLYVTYFGGSEEAGLEADLECKQLWINLGMDEARILPGSMKDNFWEMGDTGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G RDA+ LVN DDP  +EIWN+VFIQFNRES+  LKPLP K +DTG+G ER
Sbjct: 187 CSEIHYDRIGGRDASHLVNMDDPNVLEIWNLVFIQFNRESESVLKPLPKKSIDTGMGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+F+P F+AIQQ TGARPY+GKVGA+D D +DMAYRV+ADH RTL+
Sbjct: 247 LVSVLQNKMSNYDTDLFLPYFEAIQQGTGARPYTGKVGAEDVDGIDMAYRVLADHARTLT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A++DG  P N GR YVLRRILRRAVRY  E L AQ GFF  LV++VVK +GD FPEL++
Sbjct: 307 IALSDGGRPDNTGRGYVLRRILRRAVRYSHEKLGAQRGFFASLVDVVVKSLGDAFPELRK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
               ++++I  EE  F KTL +G     +    + + K + G  A++L+DTYGFPLDLT 
Sbjct: 367 DPEMVKDVINEEEVQFLKTLSRGRRILDRKIISLGESKTVPGDTAWLLYDTYGFPLDLTS 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
           L+AEE+GL VD+  F      A+ +S   Q K AG    I++D  A   L  +GV ATDD
Sbjct: 427 LIAEEKGLNVDLAAFEEEKKAAQLKS---QGKGAGDEDHIMLDIYAIEELRTKGVAATDD 483

Query: 536 SFKFIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           S K+ +         FQ   + + A+     F   V  G E G++L  +SFYAEQGGQ F
Sbjct: 484 SLKYRYSSDERGQYEFQPASATVLALRRDRTFCTEVSSGQECGVLLDQTSFYAEQGGQTF 543

Query: 587 DEGFI------EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           DEGF+       G    F V+N Q+ GG+V+H+G++    G   +G++V   VD  RR+L
Sbjct: 544 DEGFMVREDDSTGDRMEFTVKNTQVRGGYVLHVGTVY---GTLKLGDQVTLHVDEARRRL 600

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           +  NHT TH+LNFALR VLG+  DQ+GS+V P++LRFDF+    +    +RR E I    
Sbjct: 601 VMSNHTATHILNFALRGVLGE-ADQRGSLVAPDRLRFDFTAKGALSTGEVRRTEEIACAL 659

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           IK    V++ +A LA+AK I GLRAVF E YPDPVRVV+IG  VE+LL DP++      S
Sbjct: 660 IKEAKTVYALDAPLAQAKAIQGLRAVFDETYPDPVRVVSIGIPVEELLKDPDSTAGSLTS 719

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSL--------- 811
            E CGGTHL N+  A  F ++SEE IAKGIRRI AVT G A KA   A  L         
Sbjct: 720 IEFCGGTHLQNSAHAAPFVIVSEEAIAKGIRRIVAVTGGEAQKAQRKAEVLHQALSALSA 779

Query: 812 ------------EKEVDDASKIEGSLL----EKNQVRKAQK--KVAEENLQKAVK----- 848
                       +KE+ D ++  G+ +     K+++R+A K  K   ++L ++ K     
Sbjct: 780 KVQQQAAPNKDVQKEIADMTESVGTAVISQWRKDEMREAVKGLKKVMDDLDRSYKADIQK 839

Query: 849 -VATETAEAAASN-GKPFCISRVEVGLDAAAVREAVLKVIEQKG--MPVMVFSTDETTNK 904
            V  +T+E   +   +P  I  +E G  A A+ E+ LK++  +      M+F+ D     
Sbjct: 840 RVLEKTSEVIQNKPNQPLLIMEMETGASAKALNES-LKLLXSQSPQTAAMLFTVDPDAXX 898

Query: 905 AVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAA 964
                  P++   S  L+ SEW+   L PL    G GK   A   G +   +  A+ +A 
Sbjct: 899 XXXXXXXPQEV-ASPGLKASEWVQ-ELCPLLDGKGGGKDMSAQATGKNTQGLQEALQVAD 956

Query: 965 EFAAMKL 971
            FA MKL
Sbjct: 957 RFARMKL 963


>gi|403215817|emb|CCK70315.1| hypothetical protein KNAG_0E00470 [Kazachstania naganishii CBS
           8797]
          Length = 956

 Score =  861 bits (2225), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 438/862 (50%), Positives = 573/862 (66%), Gaps = 39/862 (4%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           +W A  VR+TF  +F+ + H    SSPVVP +DPTLLFANAGMNQYKPIF GT DP++  
Sbjct: 8   KWTAKNVRNTFMDYFKQREHTFVHSSPVVPFDDPTLLFANAGMNQYKPIFQGTVDPSSDF 67

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
             L RA N+QKC+RAGGKHNDL+DVGKD+YHHTFFEMLGNWSFGDYFK EAI++AWELLT
Sbjct: 68  YTLKRAYNSQKCVRAGGKHNDLEDVGKDSYHHTFFEMLGNWSFGDYFKKEAIQFAWELLT 127

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
            VY +P+DRLY TYF GD K GL PD EAR +W    +    +LP   KDNFWEMG+ GP
Sbjct: 128 VVYGIPSDRLYVTYFEGDSKLGLQPDEEARQLWRDVGVLDDHILPGNAKDNFWEMGEQGP 187

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPCSE+HYDR G R+AASLVN DDP  +E+WN+VF+QFNRE DGSLK LPAKH+DTG+G
Sbjct: 188 CGPCSEVHYDRIGGRNAASLVNMDDPDVLEVWNLVFMQFNREQDGSLKSLPAKHIDTGMG 247

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
           FERL S+LQ+  SNYDTDVF+P+F  IQ+ T ARPY+GK   +DAD VD AYRV+ADH+R
Sbjct: 248 FERLVSVLQDVRSNYDTDVFIPLFKRIQEITNARPYAGKFSEEDADGVDTAYRVLADHVR 307

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFP 414
           TL FA+ADG  P NEGR YVLRRILRR  RY  + +    G FF+ L   +++ + D+FP
Sbjct: 308 TLMFALADGGVPNNEGRGYVLRRILRRGARYARKYMNYPIGNFFSTLAPTLIEQVKDIFP 367

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTYGF 471
           EL +  + + EI+  EEASF KTL +G    EK+   A +   K L G+  + L+DTYGF
Sbjct: 368 ELAKDPSFLFEILDEEEASFAKTLDRGERLFEKYAATAAENSTKTLDGKQVWRLYDTYGF 427

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           P+DLT+LMAEE+GL +D  GF  A  E+ E S+    K     I ++    + L+   V 
Sbjct: 428 PVDLTELMAEEKGLKIDGPGFEKAKQESYEASKRGGKKDDTSLIKLNVHELSELNNENVP 487

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGN-EVGIVLASSSFYAEQGGQIFDEG- 589
            TDDS K+  F++  + I  ++ G+ F++ +   + + G++L  S FYAEQGGQ +D G 
Sbjct: 488 KTDDSAKY-GFENIDAKILKLHDGTAFVDEITETDKKYGMILDKSCFYAEQGGQEYDTGK 546

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
            +      F V NVQ+Y GFV H GSL E  G+ SVG++VI   D  RR  I  NHT TH
Sbjct: 547 IVIDDVAEFNVENVQLYNGFVFHTGSLKE--GKLSVGDKVIASYDELRRFPIKNNHTGTH 604

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +LNFALR+V+G  VDQKGS+V PEKLRFDFSH K +  + +R +E++ NEQIK  L V+ 
Sbjct: 605 ILNFALRQVIGKEVDQKGSLVAPEKLRFDFSHKKALSLDEVRSVENVCNEQIKESLSVYY 664

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
           K+  L +AK I+ +RAVFGE YPDPVRVV+IG+ V++LLADP N+EW   S E CGGTH+
Sbjct: 665 KDVPLEQAKAISSVRAVFGETYPDPVRVVSIGKPVDELLADPANEEWNKYSVEFCGGTHV 724

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK--------- 820
             T + +   +L E GIAKGIRRI AVT   A++A   A   + ++    K         
Sbjct: 725 VKTSDIKFLVILEENGIAKGIRRIVAVTGTEAFEAQRVAQEFDSQLVATEKMFFSAEKEK 784

Query: 821 -----------IEGSLLEKNQVR----KAQKKVAEENLQKAVKVATETAEAAAS----NG 861
                      +  S+++K++++    K  K V +E   +A K   +T +   S    NG
Sbjct: 785 KLKELGVQLGQLSVSVIDKHELKEKFNKIDKAVRDEVKSRAKKEIKQTLDDVKSYFTENG 844

Query: 862 KP-FCISRVEVGLDAAAVREAV 882
           +  F +  + + ++A A+ E+V
Sbjct: 845 ESTFLVKHISIPVNAKAITESV 866


>gi|406607139|emb|CCH41400.1| alanyl-tRNA synthetase [Wickerhamomyces ciferrii]
          Length = 938

 Score =  861 bits (2225), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 468/941 (49%), Positives = 606/941 (64%), Gaps = 49/941 (5%)

Query: 70  FFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRACNTQKCI 129
           +F+++ H    SS VVP +DPTLLFANAGMNQYKPIFLGT DP++    L RA N+QKCI
Sbjct: 6   YFKERGHTFVPSSSVVPYDDPTLLFANAGMNQYKPIFLGTVDPSSDFHNLKRAVNSQKCI 65

Query: 130 RAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLPADRLYAT 189
           RAGGKHNDL+DVG+D+YHHTFFEMLGNWSFGDYFK EAI+++WELLTKVY LPADRLY T
Sbjct: 66  RAGGKHNDLEDVGRDSYHHTFFEMLGNWSFGDYFKKEAIQYSWELLTKVYGLPADRLYVT 125

Query: 190 YFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTG 248
           YFGGDE +GL PD EA+ +W    +    +LP   KDNFWEMGD GPCGPCSE+HYDR G
Sbjct: 126 YFGGDEASGLEPDLEAKQLWKDVGVADDHILPGSVKDNFWEMGDQGPCGPCSEVHYDRIG 185

Query: 249 NRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMS 308
            R+AA LVN DDP  +EIWN VF+QFNRE+D SLKPLP+KH+DTGLGFERL SILQN  S
Sbjct: 186 GRNAAHLVNEDDPNVLEIWNNVFMQFNREADRSLKPLPSKHIDTGLGFERLVSILQNVYS 245

Query: 309 NYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPG 368
           NYDTDVF P+F  IQ+ TGAR Y+GK G +D D +D AYRV+ADH+RTL+FAIADG  P 
Sbjct: 246 NYDTDVFQPLFKKIQEITGAREYTGKFGDEDVDGIDTAYRVLADHVRTLTFAIADGGVPN 305

Query: 369 NEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFPELKQREAHIREII 427
           NEGR YVLRRILRR  RY  +      G FF+ L   ++  + D+FPEL +  + I EI+
Sbjct: 306 NEGRGYVLRRILRRGARYARKYFNYPIGNFFSQLSPTLIDQVKDIFPELTKDPSTIFEIL 365

Query: 428 AAEEASFGKTLLKGIEKFKK--AAQDVQGKVLSGQDAFILWDTYGFPLDLTQLMAEERGL 485
             EEASF KTL +G + F++   A     K L+G+D + L+DTYGFP+DLT LMAEE GL
Sbjct: 366 DEEEASFSKTLDRGEKLFQQYATAASKSDKTLNGKDVWRLYDTYGFPVDLTTLMAEEAGL 425

Query: 486 LVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQDH 545
            +D EGF  A  E+ E S++    +    I +D  A   L +  +  TDDS KF  F++ 
Sbjct: 426 KIDNEGFEKARIESYEASKAGGKSKGVELIKLDVHALGKLSEDALPKTDDSSKF-GFENI 484

Query: 546 KSVIKAIYTGSEFIESVVP-GNEVGIVLASSSFYAEQGGQIFDEG--FIEGLFGSFYVRN 602
           ++ I AIY G +F+E +     + GI+L  + FYAEQGGQ +D G   I+G    F V N
Sbjct: 485 EAKILAIYDGKDFVEEITDITKQYGIILDKTPFYAEQGGQEYDTGKIVIDGS-SEFNVEN 543

Query: 603 VQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDH 662
            Q Y G+V H G L E  G+  + ++VI   D  RR  I  NHT TH+LN ALREVLGD 
Sbjct: 544 TQQYAGYVFHTGRLAE--GQLKINDKVIAGYDELRRWPIRNNHTATHILNLALREVLGDE 601

Query: 663 VDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCING 722
           V+QKGS+V  EKLRFDFS+ + +  + + ++E I NE+IK    V+SKE  L  AK I  
Sbjct: 602 VNQKGSLVAQEKLRFDFSNKQGLTLDQVAKVEQISNEEIKKSQVVYSKEVALDVAKGIYA 661

Query: 723 LRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLS 782
           +RAVFGE YPDPVRVV+IG+ VEDLL DP+N +W   S E CGGTH++ T + + F ++ 
Sbjct: 662 VRAVFGETYPDPVRVVSIGQPVEDLLNDPQNPKWHGASIEFCGGTHVAKTSDIKDFVIVE 721

Query: 783 EEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKNQVRKAQKKVAEEN 842
           E GIAKGIRRI AVT   A++    A   E E+ +A K+E S L++ ++++   K+ + N
Sbjct: 722 ESGIAKGIRRIIAVTGTEAHEVQRIAQEFEHELINAGKLEFSPLKEKKLKELGVKLGQLN 781

Query: 843 LQ---------------KAVKVATETAEAA-------------ASNGKP-FCISRVEVGL 873
           +                K+VK   +T + A              SN K  F ++ V++G 
Sbjct: 782 ISILTKNELKNKFAAIDKSVKDELKTRQKAESKKTLDAVKEYFQSNEKSEFFVTHVDIGS 841

Query: 874 DAAAVREAVLKVIEQ-KGMPVMVFSTDETTNKAVVCAGVPEKSDQ--SKQLEVSEWLTAA 930
           +A A+ EA+  V  +  G  + VF    T N+  V  G    SD+  +K +   E    A
Sbjct: 842 NAKAITEAINYVKSKLTGKSLYVF----TGNEDKVAHGC-YISDEAIAKGIVAKEVAEQA 896

Query: 931 LQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
            + + G+ G GKG ++ G G   + V  A+    +  A KL
Sbjct: 897 TKHIGGKAG-GKGNVSQGMGDKVSGVDSAVADIQKLLAEKL 936


>gi|224014532|ref|XP_002296928.1| alanine-trna ligase [Thalassiosira pseudonana CCMP1335]
 gi|220968308|gb|EED86656.1| alanine-trna ligase [Thalassiosira pseudonana CCMP1335]
          Length = 933

 Score =  861 bits (2224), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 471/949 (49%), Positives = 613/949 (64%), Gaps = 59/949 (6%)

Query: 57  EWPATKVRDTFFKFFEDKN-HVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQ 115
           EW  +K+R TF  +F+ K+ H    SSP  P+NDPTLLF NAGMNQ+KPIFLG A P T+
Sbjct: 1   EWTTSKIRSTFISYFQSKHSHTFIPSSPSAPLNDPTLLFTNAGMNQFKPIFLGRAPPGTE 60

Query: 116 LSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELL 175
           L+ LTRA N+QKCIRAGGKHNDL+DVGKDTYHHTFFEMLG+WSFGDYFK EAI++AW+LL
Sbjct: 61  LATLTRAVNSQKCIRAGGKHNDLEDVGKDTYHHTFFEMLGSWSFGDYFKKEAIDYAWDLL 120

Query: 176 TKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGP 235
           T+VY +  +RLYATYF GDE  GL  D EA+D WL++LP  RVL    KDNFWEMGDTGP
Sbjct: 121 TEVYGIEEERLYATYFQGDEALGLEEDTEAKDFWLRYLPEERVLGCSAKDNFWEMGDTGP 180

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPCSEIHYDR GNRDA++LVN DDP  IEIWN+VFIQFNR+ +G L PLPAKHVDTG+G
Sbjct: 181 CGPCSEIHYDRIGNRDASALVNEDDPDVIEIWNLVFIQFNRDENG-LNPLPAKHVDTGMG 239

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
            ERL S+LQNK SNYD D F PIFDAI++     PY GK+G +D    D AYR VADH R
Sbjct: 240 LERLCSLLQNKSSNYDIDAFTPIFDAIEKVANVGPYEGKLGEEDKTLKDTAYRAVADHAR 299

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPE 415
           TL+FA+ADG+ P NEGR YVLRRILRRA RYG ++LK + GFF+ LV +VV++ G+ +PE
Sbjct: 300 TLTFALADGAVPDNEGRGYVLRRILRRATRYGQQILKCEPGFFSTLVPVVVEIFGEHYPE 359

Query: 416 LKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDL 475
           L   +A+I EI+  EE +F   L +GI+ F++   D + K++ G  AF L+DT GFP+DL
Sbjct: 360 LIANQANIIEIVQEEEEAFSTMLDRGIKYFEEEISDDKKKLVPGDKAFFLYDTLGFPIDL 419

Query: 476 TQLMAEERGLLVDIEGFNNAMDEARERSRSAQ--NKQAGGA-IVMDADATAALHKRGVLA 532
           T+LMA E G+ VD++GF   M+  ++RSR A+   K  GG  + + A+ TA L   G+  
Sbjct: 420 TELMATEAGMTVDMKGFEEEMEGQKQRSREARLAAKGLGGQRLELIAEQTAWLADEGIAD 479

Query: 533 TDDSFKFIWFQDHKSVIKAIYTGSEFI---ESVVPGNEVGIVLASSSFYAEQGGQIFDEG 589
           TDDS K+ W +   + IKA++T   F+   +    G+ VG+VL  +SFYAE GGQ  D G
Sbjct: 480 TDDSSKYDWDKVVDASIKAVFTSDGFLGEGDVAKEGDTVGLVLDKTSFYAEAGGQDTDLG 539

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
            I    G  +V +VQ YGG+++H G +++G+   SVG  V C+VDY RR+ +APNH+ TH
Sbjct: 540 TISFEGGELFVNDVQAYGGYILHSGVISKGS--VSVGIAVKCQVDYARRRDVAPNHSMTH 597

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +LN ALREVLG+  DQ+GS    EKLRFDFSH   +  E LR  E  V + I+  L V +
Sbjct: 598 VLNAALREVLGEGCDQRGSQCNDEKLRFDFSHKSAMSTEQLRDTEIYVRDTIEKNLPVTA 657

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
              +LA+AK I G+RA+FGEVYPDPVRVV +G                  S E CGGTH+
Sbjct: 658 DVMSLADAKAIPGVRAMFGEVYPDPVRVVRVGD---------------DCSVEFCGGTHI 702

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAAC----------------SLEK 813
           SNT EAEAF L  E  +AKGIRRITA+T G A++   AA                 +L K
Sbjct: 703 SNTAEAEAFVLTEETAVAKGIRRITALTRGAAFEQKTAALEEIDADNSPDLDKQAGALRK 762

Query: 814 EVDDASKIEGSLLEKNQVR---------KAQKKVAEENLQKAVKVATETAEAAASNGKPF 864
           ++ DA+++  +L  + + R         +A+K++    + K +   TE  E A  +GK  
Sbjct: 763 DL-DAAELSAALKSELRARIEGVQKKGIEAKKRLLAGRVDKCLNGVTEEVEKALIDGKKS 821

Query: 865 CISRVEVGLDAAAVREAVLKVIEQKGMPVMVF---STDE--TTNKAVVCAGVPEKSDQSK 919
            +  +++G D+ A ++ +  V  QK  P M F   S +E  +  K +  A VP+   +  
Sbjct: 822 LVLNLDIGADSKASQKVIKAV--QKLAPEMAFMGISEEEPGSGGKILCFAIVPDSLMKET 879

Query: 920 QLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAA 968
            L+ +EW    L  + GR G   G  A GQ      V   +  A  FAA
Sbjct: 880 GLKANEWTKEVLDSVGGRGGGKPGS-AQGQAPSCEDVGAVIAKAESFAA 927


>gi|432862331|ref|XP_004069802.1| PREDICTED: alanine--tRNA ligase, cytoplasmic-like [Oryzias latipes]
          Length = 966

 Score =  860 bits (2223), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 468/967 (48%), Positives = 607/967 (62%), Gaps = 65/967 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R  F  FF    H    SS  +P++DPTLLFANAGMNQYKPIFL T DP+  ++KL
Sbjct: 7   AAQIRQKFIDFFLRYEHQYVHSSSTIPLDDPTLLFANAGMNQYKPIFLNTIDPSHPMAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A + A ELLT+ +
Sbjct: 67  RRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKQLACKMALELLTEEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +  DRLY TYFGG+  AGL PD E + IW+   +  +R+LP   KDNFWEMGDTGPCGP
Sbjct: 127 GISIDRLYVTYFGGNPDAGLEPDLECKQIWMDLGVEEARILPGSMKDNFWEMGDTGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G RDA+ LVN DDP  +EIWN+VFIQFNRES+  LKPLP K +DTG+G ER
Sbjct: 187 CSEIHYDRIGGRDASHLVNMDDPNVLEIWNLVFIQFNRESETELKPLPKKSIDTGMGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+F+P F+AIQ+ TGARPYSGKVGA+D D +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYSGKVGAEDVDGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A++DG  P N GR YVLRRILRRAVRY  E L AQ GFF  LV++VV  +GD FPELK+
Sbjct: 307 IALSDGGRPDNTGRGYVLRRILRRAVRYSHEKLGAQRGFFASLVDVVVDSLGDAFPELKK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
               ++++I  EEA F KTL +G     +    +   K L G  A++L+DTYGFPLDLT 
Sbjct: 367 DPDMVKDVINEEEAQFLKTLSRGRRILDRKIMSLGDCKTLPGDTAWLLYDTYGFPLDLTS 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
           L+AEE+G+ VD+ GF      A+ +S   Q K AG    I++D  A   L  + V  TDD
Sbjct: 427 LIAEEKGMEVDLAGFEEEKKAAQLKS---QGKGAGDVDHIMLDIYAIEELRNKHVPPTDD 483

Query: 536 SFKFIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           S K+++         FQ   + + A+     F E V  G E G+VL  +SFYAEQGGQ +
Sbjct: 484 SPKYVYTSDENGNYEFQQASATVLALRCDRAFCEEVTTGQECGVVLDQTSFYAEQGGQTY 543

Query: 587 DEGFI------EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           DEG++            F V+N Q+ GG+V+HIG++    G   VG+ V   +D  RR+ 
Sbjct: 544 DEGYMLRENDNTDDRMEFTVKNTQVRGGYVLHIGTVY---GTLRVGDRVSLCIDEARRRP 600

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           I  NHT TH+LNFALR VLG+  DQ+GS+V P++LRFDF+    +  + + R E I    
Sbjct: 601 IMSNHTATHILNFALRGVLGE-ADQRGSLVAPDRLRFDFTAKGALKTDEIHRTEDIACAM 659

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I+    V++KEA+LAEAK I GLRAVF E YPDPVRVV+IG  V++LL DP +      S
Sbjct: 660 IRDAKPVYAKEASLAEAKAIQGLRAVFDETYPDPVRVVSIGVPVQELLDDPNSPAGSLTS 719

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSL--------- 811
            E CGGTHL N+  A  F ++SEE IAKGIRRI AVT   A KA   A +L         
Sbjct: 720 IEFCGGTHLQNSSHAAPFVIVSEEAIAKGIRRIVAVTGAEAQKAQRKADALRQSLSALGD 779

Query: 812 ------------EKEVDDASKIEGSLL----EKNQVRKAQK--KVAEENLQKAVK----- 848
                       +KE+ D ++  G+ +    +K+++R+  K  K   ++L ++ K     
Sbjct: 780 KVKQQASPNKDIQKEIADMTESLGTAVISQWQKDEMRETLKGLKKTMDDLDRSYKADIQK 839

Query: 849 -VATETAEAAASN-GKPFCISRVEVGLDAAAVREAVLKVIEQKG--MPVMVFSTDETTNK 904
            V  +T E   SN  +P  I  +E G  A A+ E+ LK+++ +      M+ + D    K
Sbjct: 840 RVLEKTKEVIESNPNQPLLIMEMETGASAKALNES-LKLLKAQSPHTATMLLTVDPDAGK 898

Query: 905 AVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAA 964
                 VP++    + L+ SEW+      L G+ G GK   A   G +   +  A+ +A 
Sbjct: 899 ITCLCQVPQEV-AGRGLKASEWVQELCPLLDGK-GGGKDTSAQATGRNTQCLQEALQMAN 956

Query: 965 EFAAMKL 971
           EFA +KL
Sbjct: 957 EFARLKL 963


>gi|452979442|gb|EME79204.1| hypothetical protein MYCFIDRAFT_57749 [Pseudocercospora fijiensis
           CIRAD86]
          Length = 958

 Score =  860 bits (2223), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 481/963 (49%), Positives = 612/963 (63%), Gaps = 52/963 (5%)

Query: 45  VAAMPGADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKP 104
           +A+  G +P   EW A KVR TF  +F    H    S  VVP+ DPTLLF NAGMNQYK 
Sbjct: 1   MASTAGQEP---EWTAVKVRKTFIDYFGKNGHTFVPSGSVVPLADPTLLFTNAGMNQYKS 57

Query: 105 IFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK 164
           IFLGT DP++  +KL RA N+QKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK
Sbjct: 58  IFLGTVDPDSDFAKLKRAANSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFK 117

Query: 165 NEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIW-LKFLPASRVLPFGC 223
            EAI ++WELLTKVY L  DRLY TYF G + AGL PD EAR+ W  + +P   +L    
Sbjct: 118 KEAIHFSWELLTKVYGLSPDRLYVTYFEGKKDAGLEPDTEAREFWRAEGVPDDHILTGDM 177

Query: 224 KDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLK 283
           KDNFWEMGD GPCGPCSEIHYDR G R+AA LVN DDP  IEIWN VFIQ+NRE D SL+
Sbjct: 178 KDNFWEMGDQGPCGPCSEIHYDRIGGRNAADLVNKDDPNVIEIWNNVFIQYNREPDKSLR 237

Query: 284 PLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKV 343
           PLPAKH+DTG+GFERL SILQNK SNYDTDVF PIF  I++ TGAR YSGK G +D D +
Sbjct: 238 PLPAKHIDTGMGFERLVSILQNKYSNYDTDVFTPIFARIREITGAREYSGKFGDEDVDGI 297

Query: 344 DMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLV 402
           D AYRVVADH+R L+FAI+DG  P N GR YV+RR+LRR  RY  +      G FF+ +V
Sbjct: 298 DTAYRVVADHVRLLTFAISDGGIPNNVGRGYVVRRVLRRGARYARKYFNTDIGSFFSKIV 357

Query: 403 NIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG---KVLSG 459
             +V+ MGD+FPE+K+++A + EI+  EE SF KTL +G   F+K AQ  +    KVL G
Sbjct: 358 PTLVEQMGDMFPEIKKKQAEVIEILDEEELSFAKTLDRGENMFEKYAQKCKANNSKVLEG 417

Query: 460 QDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIV-MD 518
            D + L+DTYGFP+DLT+LMAEERGL +  E    A ++ARE S+    K+AG  +V +D
Sbjct: 418 DDVWRLYDTYGFPVDLTRLMAEERGLDIIDEDVAKAQEKAREASKG--EKKAGTDLVKLD 475

Query: 519 ADATAALHKRG-VLATDDSFKFIWFQDHKSVIKAIYTGSEFIESV--VP-GNEVGIVLAS 574
                AL +   V  TDDS KF    +  + IKAIY G +F++S   VP G + G+ L  
Sbjct: 476 VHDINALEQMADVPKTDDSPKF-QRDNITATIKAIYHGRKFLQSTEEVPKGEQFGVFLDR 534

Query: 575 SSFYAEQGGQIFDEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICK 632
           ++FYAEQGGQ  D G   I+G      V NVQ+YGG+V+H G +  G     VG++V+ +
Sbjct: 535 TNFYAEQGGQENDTGRILIDGE-AEIDVHNVQLYGGYVMHTGYMNYGT--LKVGDQVLSE 591

Query: 633 VDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRR 692
            D  RR+ I  NHT TH+LNFALRE LGD V+QKGS+V PEKLRFDFSH +      L +
Sbjct: 592 YDELRRQPIRNNHTGTHILNFALRETLGDDVNQKGSLVAPEKLRFDFSHKQGCSDAELEK 651

Query: 693 IESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPE 752
           IE +    I+   +V++K+  LA AK I G+RAVFGE YPDPVRVV+IG  VEDLL DP+
Sbjct: 652 IEELSTGYIRQNSEVYAKDVPLATAKQIEGVRAVFGETYPDPVRVVSIGVPVEDLLEDPK 711

Query: 753 NKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYK--------- 803
             +W ++S E CGGTH+ NT E +   +L E GIAKGIRRI AVT   A++         
Sbjct: 712 RSDWRNVSVEFCGGTHVKNTTEIKDLIVLEESGIAKGIRRIVAVTGQTAHRIQLLGEEWN 771

Query: 804 -----------AFEAACSLEKEVDDASKIEGSLLEKNQVRKAQKKVAEENL--QKAVKVA 850
                        E   ++++   D  K+E + L K ++R+   KV +ENL  QKA + A
Sbjct: 772 KKVAHIEGMKYGPEKEGAVKEAQHDLGKLEMAALTKTKLRERVAKVVKENLDHQKAAQKA 831

Query: 851 TETAEAAASN-------GKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTN 903
                  A N            +    V   + A++E  +KVI  K     V+   +T +
Sbjct: 832 ENKKLLDAVNEHFDKNKDSNTLVLSFPVSAGSKAIQE-TMKVIGNKQKDKTVYLLGKTED 890

Query: 904 KAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLA 963
             VV         Q K  + ++W +  +  L G    GKG  + GQGT+A +V  A+++A
Sbjct: 891 GKVVHGCHVSSDAQGKGADAAKW-SNEVAGLVGGKAGGKGATSLGQGTNADKVDDAVEVA 949

Query: 964 AEF 966
            ++
Sbjct: 950 RKY 952


>gi|113195586|ref|NP_001037775.1| alanyl-tRNA synthetase, cytoplasmic isoform 1 [Danio rerio]
          Length = 991

 Score =  860 bits (2222), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 466/967 (48%), Positives = 612/967 (63%), Gaps = 65/967 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R+ F  FF    H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  +++L
Sbjct: 32  AAQIREKFIDFFRRHEHQYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMARL 91

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK+ A + A ELLT+ +
Sbjct: 92  RRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKHLACKMALELLTQEF 151

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +P +RLY TYFGG   AGL PD E + IWL   +  SR+LP   KDNFWEMGDTGPCGP
Sbjct: 152 GIPIERLYVTYFGGHADAGLEPDLECKQIWLDLGMEESRILPGSMKDNFWEMGDTGPCGP 211

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G RDAA LVN DDP  +EIWN+VFIQFNRES+  LKPLP K +DTG+G ER
Sbjct: 212 CSEIHYDRIGGRDAAHLVNMDDPNVLEIWNLVFIQFNRESETVLKPLPKKSIDTGMGLER 271

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+F+P F+AIQ+ TGAR Y+GKVGA+D D +DMAYRV+ADH RT++
Sbjct: 272 LVSVLQNKMSNYDTDLFVPYFEAIQKGTGARAYTGKVGAEDTDGIDMAYRVLADHARTIT 331

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A++DG  P N GR YVLRRILRRAVRY  E L AQ GFF  LV++VVK +GD FPEL++
Sbjct: 332 IALSDGGRPDNTGRGYVLRRILRRAVRYSHEKLGAQRGFFASLVDVVVKSLGDAFPELRK 391

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
               +++II  EEA F KTL +G     +  Q + +   + G  A++L+DTYGFPLDLT 
Sbjct: 392 DPDMVKDIINEEEAQFLKTLSRGRRILDRKIQSLGESTTIPGDTAWLLYDTYGFPLDLTA 451

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
           L+AEERG+ VD+  F      A+ +S   Q K +G    I++D  A   L  +GV ATDD
Sbjct: 452 LIAEERGMGVDLLAFEEEKKAAQLKS---QGKGSGDEDHIMLDIYAIDELRNKGVAATDD 508

Query: 536 SFKFIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           S K+ +         F+     + A+     F++ V+ G E G++L  +SFYAEQGGQ F
Sbjct: 509 SPKYKYTSDDNGNYEFEQAVGTVLALRRERMFVDEVITGQECGVLLDKTSFYAEQGGQSF 568

Query: 587 DEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           DEG++     S      F V+N Q+ GG+V+HIG++    G   VG+ +   VD  RR+ 
Sbjct: 569 DEGYMLRENDSAEDRMEFTVKNTQVRGGYVLHIGTVY---GTLKVGDRLTLHVDEARRRP 625

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           I  NHT TH+LN+ LR VLG+  DQ+GS+V P++LRFDF+    +  + +RR E I    
Sbjct: 626 IMSNHTATHILNYGLRSVLGE-ADQRGSLVAPDRLRFDFTAKGAMSTDEVRRTEEIAAAM 684

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I     V++ +A LA AK I GLRAVF E YPDPVRVV+IG  VE+LLADP +      S
Sbjct: 685 IADAKGVYALDAPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVEELLADPNSPAGSLTS 744

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSL--------- 811
            E CGGTHL N+  A  F ++SEE IAKGIRRI AVT   A KA   A +L         
Sbjct: 745 IEFCGGTHLQNSSHAAPFVIVSEEAIAKGIRRIVAVTGAEAQKAQRKADALKLSLDALAE 804

Query: 812 ------------EKEVDDASKIEGSLL----EKNQVRKAQKKVAE--ENLQKAVK----- 848
                       +KE+ D ++  G+ +     K+++R++ K + +  ++L +A K     
Sbjct: 805 KVKAQSIPNKDVQKEIADMTESLGTAVISQWRKDEMRESLKGLKKIMDDLDRASKADVQK 864

Query: 849 -VATETAEAAASN-GKPFCISRVEVGLDAAAVREAVLKVIEQKG--MPVMVFSTDETTNK 904
            V  +T E   SN  +P  +  +E G  A A+ E+ LK+++        M+F+ D    K
Sbjct: 865 RVLEKTKEIIDSNPNQPLIVMEMESGASAKALNES-LKMLKTNSPQTAAMLFTVDNDAGK 923

Query: 905 AVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAA 964
            +    VP+    ++ L+ SEW+      L G+ G GK   A   G +   +  A+ LA+
Sbjct: 924 IICLCQVPQDV-ANRGLKASEWVQEVCPLLDGK-GGGKDMSAQATGRNTQCIQEALQLAS 981

Query: 965 EFAAMKL 971
           EFA +KL
Sbjct: 982 EFARLKL 988


>gi|355710377|gb|EHH31841.1| hypothetical protein EGK_12990 [Macaca mulatta]
          Length = 992

 Score =  860 bits (2221), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 466/990 (47%), Positives = 615/990 (62%), Gaps = 87/990 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A+++R  F  FF+   H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  ++KL
Sbjct: 7   ASEIRQRFIDFFKRNEHTYIHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A + A ELLT+ +
Sbjct: 67  SRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF---------LPASRVLPFGCKDNFWEM 230
            +P  RLY TYFGGDE AGL PD E + IW            L  +++LP   KDNFWEM
Sbjct: 127 GIPIGRLYVTYFGGDEAAGLEPDLECKQIWQNLGAYLYSFVRLDDTKILPGNMKDNFWEM 186

Query: 231 GDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHV 290
           GDTGPCGPCSEIHYDR G RDAA LVN DDP  +EIWN+VFIQ+NRE+DG LKPLP K +
Sbjct: 187 GDTGPCGPCSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNREADGILKPLPKKSI 246

Query: 291 DTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVV 350
           DTG+G ERL S+LQNKMSNYDTD+F+P F+AIQ+ TGARPY+GKVGA+DAD +DMAYRV+
Sbjct: 247 DTGMGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVL 306

Query: 351 ADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMG 410
           ADH RT++ A+ADG  P N GR YVLRRILRRAVRY  E L A  GFF  LV++VV+ +G
Sbjct: 307 ADHARTITVALADGGRPDNTGRGYVLRRILRRAVRYAHEKLNASRGFFATLVDVVVQSLG 366

Query: 411 DVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTY 469
           D FPELK+    +++I+  EE  F KTL +G     +  Q +   K + G  A++L+DTY
Sbjct: 367 DAFPELKKDPDMVKDIVNEEEVQFLKTLSRGRRILDRKIQSLGDSKTIPGDTAWLLYDTY 426

Query: 470 GFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHK 527
           GFP+DLT L+AEE+GL+VD++GF      A+ +S   Q K AGG   I++D  A   L  
Sbjct: 427 GFPVDLTGLIAEEKGLVVDMDGFEEERKLAQLKS---QGKGAGGEDLIMLDIYAIEELRA 483

Query: 528 RGVLATDDSFKFIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFY 578
           RG+  TDDS K+ +         F++  + + A+     F+E V  G E G+VL  + FY
Sbjct: 484 RGLEVTDDSPKYNYHLDFSGSYVFENTVATVMALRREKMFVEEVSTGQECGVVLDKTCFY 543

Query: 579 AEQGGQIFDEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICK 632
           AEQGGQI+DEG++  +  S      F V+N Q+ GG+V+HIG++    G   VG++V   
Sbjct: 544 AEQGGQIYDEGYLVKVDDSSEDKTEFTVKNAQVRGGYVLHIGTIY---GDLKVGDQVRLF 600

Query: 633 VDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRR 692
           +D  RR+ I  NHT TH+LNFALR VLG+  DQKGS+V P++LRFDF+    +  + +++
Sbjct: 601 IDEPRRRPIMSNHTATHILNFALRSVLGE-ADQKGSLVAPDRLRFDFTAKGAMSTQQIKK 659

Query: 693 IESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPE 752
            E I NE I+A   V++++  LA AK I GLRAVF E YPDPVRVV+IG  V +LL DP 
Sbjct: 660 AEEIANEMIEAAKPVYTQDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPS 719

Query: 753 NKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLE 812
                  S E CGGTHL N+  A AF +++EE IAKGIRRI AVT   A K    A SL+
Sbjct: 720 GPAGSLTSVEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKVLRKAESLK 779

Query: 813 K---------------------EVDDASKIEGSLL----EKNQVRKAQKKVAE--ENLQK 845
           K                     E+ D  +   + +    +K+++R+  K + +  ++L +
Sbjct: 780 KSLSVMEAKVKAQTAPNKDVQREIADLGEALATAVIPQWQKDELRETLKSLKKVMDDLDR 839

Query: 846 AVK------VATETAEAAASN-GKPFCISRVEVGLDAAAVR---------------EAVL 883
           A K      V  +T +   SN  +P  I  +E G  A A +                  L
Sbjct: 840 ASKADVQKRVLEKTKQLIDSNPNQPLVILEMESGASAKATQGPGPPPLGHISPLALNEAL 899

Query: 884 KVIEQKG--MPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKG 941
           K+ +        M+F+ D    K      VP+ +  ++ L+ SEW+      + G+ G G
Sbjct: 900 KLFKTHSPQTSAMLFTVDNEAGKITCLCQVPQNA-ANRGLKASEWVQQVSGLMDGK-GGG 957

Query: 942 KGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           K   A   G +   +  A+ LA  FA ++L
Sbjct: 958 KDVSAQATGKNIGCLQEALQLATSFAQLRL 987


>gi|332846336|ref|XP_001169520.2| PREDICTED: LOW QUALITY PROTEIN: alanine--tRNA ligase, cytoplasmic
           isoform 2 [Pan troglodytes]
          Length = 968

 Score =  860 bits (2221), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 463/966 (47%), Positives = 612/966 (63%), Gaps = 63/966 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A+++R  F  FF+   H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  ++KL
Sbjct: 7   ASEIRQRFIDFFKRNEHTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A +   ELLT+ +
Sbjct: 67  SRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMGLELLTQEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +P +RLY TYFGGDE AGL  D E + IW    L  +++LP   KDNFWEMGDTGPCGP
Sbjct: 127 GIPIERLYVTYFGGDEAAGLEADLECKQIWQNLGLDDTKILPGNMKDNFWEMGDTGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G RDAA LVN DDP  +EIWN+VFIQ+NRE+DG LKPLP K +DTG+G ER
Sbjct: 187 CSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNREADGILKPLPKKSIDTGMGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+F+P F+AIQ+ TGARPY+GKVGA+DAD +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY  E L A  GFF  LV++VV+ +GD FPELK+
Sbjct: 307 VALADGGRPDNTGRGYVLRRILRRAVRYAHEKLNAIRGFFATLVDVVVQSLGDAFPELKK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
               +++II  EE  F KTL +G     +  Q +   K + G  A++L+DTYGFP+DLT 
Sbjct: 367 DPDMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTG 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
           L+AEE+GL+VD++GF      A+ +S   Q K AGG   I++D  A   L  RG+  TDD
Sbjct: 427 LIAEEKGLVVDMDGFEEERKLAQLKS---QGKGAGGEDLIMLDIYAIEELRARGLEVTDD 483

Query: 536 SFKFIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           S K+ +         F++  + + A+     F+E V  G E G+VL  + FYAEQGGQI+
Sbjct: 484 SPKYNYHLDSSGSYVFENTVATVMALRREKMFVEEVSTGQECGVVLDKTCFYAEQGGQIY 543

Query: 587 DEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           DEG++  +  S      F V+N Q+ GG+V+HIG++    G   VG++V   +D  RR+ 
Sbjct: 544 DEGYLVKVDDSSEDKTEFTVKNAQVRGGYVLHIGTIY---GDLKVGDQVWLFIDEPRRRP 600

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           I  NHT TH+LNFALR VLG+  DQKGS+V P++LRFDF+    +  + +++ E I NE 
Sbjct: 601 IMSNHTATHILNFALRSVLGE-ADQKGSLVAPDRLRFDFTAKGAMSTQQIKKAEEIANEM 659

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I+A   V++++  LA AK I GLRAVF E YPDPVRVV+IG  V +LL DP        S
Sbjct: 660 IEAAKAVYTQDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTS 719

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEK------- 813
            E CGGTHL N+  A AF +++EE IAKGIRRI AVT   A KA   A S++K       
Sbjct: 720 VEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKAESMKKCLSVMEA 779

Query: 814 --------------EVDDASKIEGSLL----EKNQVRKAQKKVAE--ENLQKAVK----- 848
                         E+ D  +   + +    +K+++R+  K + +  ++L +A K     
Sbjct: 780 KVKAQTAPNKDVQREIADLGEALATAVIPQWQKDELRETLKSLKKVMDDLDRASKADVQK 839

Query: 849 -VATETAEAAASN-GKPFCISRVEVGLDAAAVREAV-LKVIEQKGMPVMVFSTDETTNKA 905
            V  +T +   SN  +P  I  +E G  A A+ EA+ L  +       M+          
Sbjct: 840 RVLEKTKQFIDSNPNQPLVILEMESGASAKALNEALKLFKMHSPQTSAMLSRXXXXXXXX 899

Query: 906 VVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAE 965
                VP+ +  ++ L+ SEW+      + G+ G GK   A   G +   +  A+ LA  
Sbjct: 900 XXXCQVPQNA-ANRGLKASEWVQQVSGLMDGK-GGGKDVSAQATGKNVGCLQEALQLATS 957

Query: 966 FAAMKL 971
           FA ++L
Sbjct: 958 FAQLRL 963


>gi|169154546|emb|CAQ13590.1| novel protein similar to vertebrate alanyl-tRNA synthetase (AARS)
           [Danio rerio]
          Length = 988

 Score =  859 bits (2220), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 465/964 (48%), Positives = 611/964 (63%), Gaps = 62/964 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R+ F  FF    H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  +++L
Sbjct: 32  AAQIREKFIDFFRRHEHQYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMARL 91

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK+ A + A ELLT+ +
Sbjct: 92  RRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKHLACKMALELLTQEF 151

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +P +RLY TYFGG   AGL PD E + IWL   +  SR+LP   KDNFWEMGDTGPCGP
Sbjct: 152 GIPIERLYVTYFGGHADAGLEPDLECKQIWLDLGMEESRILPGSMKDNFWEMGDTGPCGP 211

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G RDAA LVN DDP  +EIWN+VFIQFNRES+  LKPLP K +DTG+G ER
Sbjct: 212 CSEIHYDRIGGRDAAHLVNMDDPNVLEIWNLVFIQFNRESETVLKPLPKKSIDTGMGLER 271

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+F+P F+AIQ+ TGAR Y+GKVGA+D D +DMAYRV+ADH RT++
Sbjct: 272 LVSVLQNKMSNYDTDLFVPYFEAIQKGTGARAYTGKVGAEDTDGIDMAYRVLADHARTIT 331

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A++DG  P N GR YVLRRILRRAVRY  E L AQ GFF  LV++VV+ +GD FPEL++
Sbjct: 332 IALSDGGRPDNTGRGYVLRRILRRAVRYSHEKLGAQRGFFASLVDVVVESLGDAFPELRK 391

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
               +++II  EEA F KTL +G     +  Q +     + G  A++L+DTYGFPLDLT 
Sbjct: 392 DPDMVKDIINEEEAQFLKTLSRGRRILDRKIQSLGDSTTIPGDTAWLLYDTYGFPLDLTA 451

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
           L+AEERG+ VD+  F      A+ +S   Q K +G    I++D  A   L  +GV ATDD
Sbjct: 452 LIAEERGMGVDLLAFEEEKKAAQLKS---QGKGSGDEDHIMLDIYAIDELRNKGVAATDD 508

Query: 536 SFKFIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           S K+ +         F+     + A+     F++ V+ G E G++L  +SFYAEQGGQ F
Sbjct: 509 SPKYKYTSDDNGNYEFEQAVGTVLALRRERMFVDEVITGQECGVLLDKTSFYAEQGGQSF 568

Query: 587 DEGFIEGLFGS---FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAP 643
           DEG++     S   F V+N Q+ GG+V+HIG++    G   VG+ +   VD  RR+ I  
Sbjct: 569 DEGYMLRENDSAEDFTVKNTQVRGGYVLHIGTVY---GTLKVGDRLTLHVDEARRRPIMS 625

Query: 644 NHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKA 703
           NHT TH+LN+ LR VLG+  DQ+GS+V P++LRFDF+    +  + +RR E I    I  
Sbjct: 626 NHTATHILNYGLRSVLGE-ADQRGSLVAPDRLRFDFTAKGAMSTDEVRRTEEIAAAMIAD 684

Query: 704 ELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAEL 763
              V++ +A LA AK I GLRAVF E YPDPVRVV+IG  VE+LLADP +      S E 
Sbjct: 685 AKGVYALDAPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVEELLADPNSPAGSLTSIEF 744

Query: 764 CGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSL------------ 811
           CGGTHL N+  A  F ++SEE IAKGIRRI AVT   A KA   A +L            
Sbjct: 745 CGGTHLQNSSHAAPFVIVSEEAIAKGIRRIVAVTGAEAQKAQRKADALKLSLDALAEKVK 804

Query: 812 ---------EKEVDDASKIEGSLL----EKNQVRKAQKKVAE--ENLQKAVK------VA 850
                    +KE+ D ++  G+ +     K+++R++ K + +  ++L +A K      V 
Sbjct: 805 AQSIPNKDVQKEIADMTESLGTAVISQWRKDEMRESLKGLKKIMDDLDRASKADVQKRVL 864

Query: 851 TETAEAAASN-GKPFCISRVEVGLDAAAVREAVLKVIEQKG--MPVMVFSTDETTNKAVV 907
            +T E   SN  +P  +  +E G  A A+ E+ LK+++        M+F+ D    K + 
Sbjct: 865 EKTKEIIDSNPNQPLIVMEMESGASAKALNES-LKMLKTNSPQTAAMLFTVDNDAGKIIC 923

Query: 908 CAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFA 967
              VP+    ++ L+ SEW+      L G+ G GK   A   G +   +  A+ LA+EFA
Sbjct: 924 LCQVPQDV-ANRGLKASEWVQEVCPLLDGK-GGGKDMSAQATGRNTQCIQEALQLASEFA 981

Query: 968 AMKL 971
            +KL
Sbjct: 982 RLKL 985


>gi|440907203|gb|ELR57374.1| Alanyl-tRNA synthetase, cytoplasmic [Bos grunniens mutus]
          Length = 1002

 Score =  859 bits (2220), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 471/1001 (47%), Positives = 612/1001 (61%), Gaps = 99/1001 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R  F  FF+   H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  ++KL
Sbjct: 7   AGEIRQRFIDFFKRNEHTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A + A ELLT+ +
Sbjct: 67  SRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--------------FLPA------SRVL 219
            +P +RLY TYFGGDE AGL PD E + IW                FLPA      SR+L
Sbjct: 127 GIPVERLYVTYFGGDEAAGLEPDLECKQIWQNLGSVQNPVTGCNWAFLPALCRLDDSRIL 186

Query: 220 PFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESD 279
           P   KDNFWEMGDTGPCGPCSEIHYDR G RDAA LVN DDP  +EIWN+VFIQ+NRE+D
Sbjct: 187 PGNMKDNFWEMGDTGPCGPCSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNRETD 246

Query: 280 GSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADD 339
           G LKPLP K +DTG+G ERL S+LQNKMSNYDTD+F+P F+AIQ+ TGARPY+G+VGA+D
Sbjct: 247 GILKPLPKKSIDTGMGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGRVGAED 306

Query: 340 ADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFN 399
           AD +DMAYRV+ADH RT++ A+ADG  P N GR YVLRRILRRAVRY  E L A  GFF 
Sbjct: 307 ADGIDMAYRVLADHARTITVALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRGFFA 366

Query: 400 GLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLS 458
            LV++VV+ +GD FPELK+    +++II  EE  F KTL +G     +  Q +   K + 
Sbjct: 367 TLVDVVVQSLGDAFPELKKDPDMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDSKTIP 426

Query: 459 GQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSR-SAQNKQAGGA--I 515
           G  A++L+DTYGFP+DLT L+AEE+GL+VD++GF    DE R+ ++  +Q K AGG   I
Sbjct: 427 GDTAWLLYDTYGFPVDLTALIAEEKGLVVDMDGF----DEERKLAQLKSQGKGAGGEDLI 482

Query: 516 VMDADATAALHKRGVLATDDSFKFIWFQDHK---------SVIKAIYTGSEFIESVVPGN 566
           ++D  A   L ++G+ ATDDS K+ +  D           + + A+     F+E    G 
Sbjct: 483 MLDIYAIEELREKGLEATDDSPKYSYHSDSSGTYMFESAVATVMALRRDRMFVEEASTGQ 542

Query: 567 EVGIVLASSSFYAEQGGQIFDEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGA 620
           E G+VL  + FYAEQGGQ +DEG++  +  S      F V+N Q+ GG+V+HIG+L    
Sbjct: 543 ECGVVLDKTCFYAEQGGQTYDEGYLVKVDDSSEDKTEFTVKNTQVRGGYVLHIGTLY--- 599

Query: 621 GRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFS 680
           G   VG++V   +D  RR+ +  NHT TH+LNFALR VLG+  DQ+GS+V P++LRFDF+
Sbjct: 600 GSLKVGDQVRLFIDEPRRRPVMSNHTATHILNFALRSVLGE-ADQRGSLVAPDRLRFDFT 658

Query: 681 HGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAI 740
               +  + +++ E I NE I+A   V++++ +LA AK I GLRAVF E YPDPVRVV+I
Sbjct: 659 AKGAMSTQQIKKAEEIANEMIEAAKPVYTEDCSLAAAKAIQGLRAVFDETYPDPVRVVSI 718

Query: 741 GRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGL 800
           G  V +LL DP        S E CGGTHL N+    AF ++SEE IAKGIRRI AVT   
Sbjct: 719 GVPVSELLDDPSGPAGSLTSVEFCGGTHLQNSSHVGAFVIVSEEAIAKGIRRIVAVTGAE 778

Query: 801 AYKAFEAA-------CSLEKEV--------DDASKIE--GSLLEKNQVRKAQKKVAEENL 843
           A KA   A       C LE +V        D   +I   G  L    + + QK    ENL
Sbjct: 779 AQKALRKAENLKKSLCVLEAKVKAQAAPNKDVQREIADLGEALATAIIPQWQKDEFRENL 838

Query: 844 QKAVKVATETAEAA-----------------ASNGKPFCISRVE---------------V 871
           +   KV  +   A+                 +S  +P  I  VE                
Sbjct: 839 KSLKKVMDDLDRASKADVQKRVLEKTKQLIDSSPNQPLVILEVESGASAKASRASRAALC 898

Query: 872 GLDAAAVREAV-LKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAA 930
                A+ EA+ L  +       M+F+ D    +      VP+ +  ++ L+ SEW+   
Sbjct: 899 PFSPQALNEALKLFKMHSPQTSAMLFTVDNEAGRITCLCQVPQNA-ANRGLKASEWVQQV 957

Query: 931 LQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
              + G+ G GK   A   G +   +  A+ LA  FA ++L
Sbjct: 958 SGLMDGK-GGGKDVSAQATGKNVGCLQEALQLATSFAQLRL 997


>gi|391342386|ref|XP_003745501.1| PREDICTED: alanine--tRNA ligase, cytoplasmic-like isoform 3
           [Metaseiulus occidentalis]
          Length = 977

 Score =  859 bits (2220), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 468/976 (47%), Positives = 617/976 (63%), Gaps = 69/976 (7%)

Query: 60  ATKVRDTFFKFFEDK-NHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSK 118
           A++VR  F +FF+ K  H    SS V+P +DPTLLFANAGMNQYKPIFLGT DPNT+ +K
Sbjct: 6   ASEVRTRFIEFFQKKYQHTFVPSSCVIPHDDPTLLFANAGMNQYKPIFLGTVDPNTEAAK 65

Query: 119 LTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKV 178
             R  N+QKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFGD+FK E   WAWE LTK 
Sbjct: 66  WKRTVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDFFKKEICAWAWEFLTKE 125

Query: 179 YRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCG 237
           + L  DRLY TYFGG+ +AGL PDNE + IWL   +P   +LP   KDNFWEMG+TGPCG
Sbjct: 126 FGLAEDRLYVTYFGGNPEAGLEPDNECKGIWLALGVPEDHILPGSMKDNFWEMGETGPCG 185

Query: 238 PCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFE 297
           PCSEIH+DR G R+AA LVN DDP  +EIWN+VFIQ+NRE+D SL+PLP +HVDTG+GFE
Sbjct: 186 PCSEIHFDRIGGRNAAHLVNMDDPDVLEIWNLVFIQYNREADSSLRPLPKQHVDTGMGFE 245

Query: 298 RLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTL 357
           RL S++QNK SNYDTDVF+PIFDAIQ++TG R Y+GKVGA+D D +DMAYRV+ADH RTL
Sbjct: 246 RLVSVIQNKRSNYDTDVFVPIFDAIQKSTGVRAYTGKVGAEDVDGIDMAYRVLADHARTL 305

Query: 358 SFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELK 417
           + A++DG  P N GR YVLRRILRRA+RY +E + A+ G F GLV +VV ++GD FPELK
Sbjct: 306 TIALSDGGRPDNVGRGYVLRRILRRAIRYATEKMNAKPGMFAGLVPVVVGLLGDAFPELK 365

Query: 418 QREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ-GKVLSGQDAFILWDTYGFPLDLT 476
           +    + EII  EE  F KTL +G     KA   ++ G +L G+ A+ L+DTYGFP+DLT
Sbjct: 366 KDPDTVMEIINEEETQFLKTLSRGRRLLTKAVSKIEKGGLLPGEVAWRLYDTYGFPVDLT 425

Query: 477 QLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH-KRGVLATDD 535
           QLM EE G+ VD  G+  A   A   S+   +K A  +  +D  A A L  K+ + ATDD
Sbjct: 426 QLMVEESGIFVDSAGYEKAKQAAILASQGGADK-ADDSSKLDVHAIAELQDKQKLPATDD 484

Query: 536 SFKFIW------------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGG 583
           S K+++            FQ     I AI +  +F+  V  G+  GIVL  ++FYAEQGG
Sbjct: 485 SPKYVYTAEGTGKSAKYTFQPCTGKIVAIRSKKQFVNGVNAGDLCGIVLDRTNFYAEQGG 544

Query: 584 QIFDEGFIEGLFG---SFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           QI+D GF++ +      F V  V + GGFV+HIG L   AG   VG+E+  ++D  RR  
Sbjct: 545 QIYDTGFLQHVENEDVEFAVTEVHLQGGFVVHIGRLA--AGTLKVGDELKLQIDETRRVA 602

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           +  NHT TH+LN+ALR+VL    DQ+GS+V PE++RFDF+  +P+  + +++ E    E 
Sbjct: 603 VMQNHTGTHVLNYALRKVLSADADQRGSLVAPERMRFDFASNRPMTAQEVKQAEEAAVEL 662

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           +     V++K+++L++AK + GLRAVF E YPDPVRVV+IG  VEDLLA+P+  + L+ S
Sbjct: 663 VSRNGPVYAKDSSLSQAKAVKGLRAVFNETYPDPVRVVSIGVSVEDLLANPDRGDALNTS 722

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDD--- 817
            E CGGTHL N      F +  EE IAKGIRRI A+T   A KA + A  LE EV+    
Sbjct: 723 VEFCGGTHLQNAGHIGDFVIAQEEAIAKGIRRIMALTGTEAAKATKRAEHLESEVNTLKS 782

Query: 818 ---ASKIEGSLLE--------------------------------KNQVRKAQKKVAEEN 842
                K+  SL                                  +++++K +K + +++
Sbjct: 783 LVGKDKVRSSLFPSGNLGRSLVKRITELSDEISQSSISYWRKDDLRSELKKIKKVIDDQD 842

Query: 843 LQKAVKVATETAEA-----AASNGKPFCISRVEVGLDAAAVREAVLKVIE--QKGMPVMV 895
            Q       E  E         +  P+ I +++VG +  A+ +AV+K I         M+
Sbjct: 843 KQNKAAAQMEALEEIKRVLGQGDAPPYLIRKLQVGGNGKAL-DAVMKQIRTLSPNASAML 901

Query: 896 FSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQ 955
           FS DE   + V  + VP++    K L  SEW+      + G+ G GK   A   GT+   
Sbjct: 902 FSIDEEKKRLVCLSSVPKQVVADKGLSASEWVRHIADVIGGKGG-GKDESAQASGTNPEA 960

Query: 956 VTPAMDLAAEFAAMKL 971
           ++ AM++A EFA +KL
Sbjct: 961 LSEAMNMAEEFAKLKL 976


>gi|169154547|emb|CAQ13591.1| novel protein similar to vertebrate alanyl-tRNA synthetase (AARS)
           [Danio rerio]
          Length = 963

 Score =  859 bits (2219), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 465/964 (48%), Positives = 611/964 (63%), Gaps = 62/964 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R+ F  FF    H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  +++L
Sbjct: 7   AAQIREKFIDFFRRHEHQYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMARL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK+ A + A ELLT+ +
Sbjct: 67  RRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKHLACKMALELLTQEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +P +RLY TYFGG   AGL PD E + IWL   +  SR+LP   KDNFWEMGDTGPCGP
Sbjct: 127 GIPIERLYVTYFGGHADAGLEPDLECKQIWLDLGMEESRILPGSMKDNFWEMGDTGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G RDAA LVN DDP  +EIWN+VFIQFNRES+  LKPLP K +DTG+G ER
Sbjct: 187 CSEIHYDRIGGRDAAHLVNMDDPNVLEIWNLVFIQFNRESETVLKPLPKKSIDTGMGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+F+P F+AIQ+ TGAR Y+GKVGA+D D +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFVPYFEAIQKGTGARAYTGKVGAEDTDGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A++DG  P N GR YVLRRILRRAVRY  E L AQ GFF  LV++VV+ +GD FPEL++
Sbjct: 307 IALSDGGRPDNTGRGYVLRRILRRAVRYSHEKLGAQRGFFASLVDVVVESLGDAFPELRK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
               +++II  EEA F KTL +G     +  Q +     + G  A++L+DTYGFPLDLT 
Sbjct: 367 DPDMVKDIINEEEAQFLKTLSRGRRILDRKIQSLGDSTTIPGDTAWLLYDTYGFPLDLTA 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
           L+AEERG+ VD+  F      A+ +S   Q K +G    I++D  A   L  +GV ATDD
Sbjct: 427 LIAEERGMGVDLLAFEEEKKAAQLKS---QGKGSGDEDHIMLDIYAIDELRNKGVAATDD 483

Query: 536 SFKFIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           S K+ +         F+     + A+     F++ V+ G E G++L  +SFYAEQGGQ F
Sbjct: 484 SPKYKYTSDDNGNYEFEQAVGTVLALRRERMFVDEVITGQECGVLLDKTSFYAEQGGQSF 543

Query: 587 DEGFIEGLFGS---FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAP 643
           DEG++     S   F V+N Q+ GG+V+HIG++    G   VG+ +   VD  RR+ I  
Sbjct: 544 DEGYMLRENDSAEDFTVKNTQVRGGYVLHIGTVY---GTLKVGDRLTLHVDEARRRPIMS 600

Query: 644 NHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKA 703
           NHT TH+LN+ LR VLG+  DQ+GS+V P++LRFDF+    +  + +RR E I    I  
Sbjct: 601 NHTATHILNYGLRSVLGE-ADQRGSLVAPDRLRFDFTAKGAMSTDEVRRTEEIAAAMIAD 659

Query: 704 ELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAEL 763
              V++ +A LA AK I GLRAVF E YPDPVRVV+IG  VE+LLADP +      S E 
Sbjct: 660 AKGVYALDAPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVEELLADPNSPAGSLTSIEF 719

Query: 764 CGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSL------------ 811
           CGGTHL N+  A  F ++SEE IAKGIRRI AVT   A KA   A +L            
Sbjct: 720 CGGTHLQNSSHAAPFVIVSEEAIAKGIRRIVAVTGAEAQKAQRKADALKLSLDALAEKVK 779

Query: 812 ---------EKEVDDASKIEGSLL----EKNQVRKAQKKVAE--ENLQKAVK------VA 850
                    +KE+ D ++  G+ +     K+++R++ K + +  ++L +A K      V 
Sbjct: 780 AQSIPNKDVQKEIADMTESLGTAVISQWRKDEMRESLKGLKKIMDDLDRASKADVQKRVL 839

Query: 851 TETAEAAASN-GKPFCISRVEVGLDAAAVREAVLKVIEQKG--MPVMVFSTDETTNKAVV 907
            +T E   SN  +P  +  +E G  A A+ E+ LK+++        M+F+ D    K + 
Sbjct: 840 EKTKEIIDSNPNQPLIVMEMESGASAKALNES-LKMLKTNSPQTAAMLFTVDNDAGKIIC 898

Query: 908 CAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFA 967
              VP+    ++ L+ SEW+      L G+ G GK   A   G +   +  A+ LA+EFA
Sbjct: 899 LCQVPQDV-ANRGLKASEWVQEVCPLLDGK-GGGKDMSAQATGRNTQCIQEALQLASEFA 956

Query: 968 AMKL 971
            +KL
Sbjct: 957 RLKL 960


>gi|118763839|gb|AAI28795.1| Aars protein [Danio rerio]
          Length = 966

 Score =  859 bits (2219), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 465/967 (48%), Positives = 611/967 (63%), Gaps = 65/967 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R+ F  FF    H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  +++L
Sbjct: 7   AAQIREKFIDFFRRHEHQYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMARL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK+ A + A ELLT+ +
Sbjct: 67  RRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKHLACKMALELLTQEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +P +RLY TYFGG   AGL PD E + IWL   +  SR+LP   KDNFWEMGDTGPCGP
Sbjct: 127 GIPIERLYVTYFGGHADAGLEPDLECKQIWLDLGMEESRILPGSMKDNFWEMGDTGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G RDAA LVN DDP  +EIWN+VFIQFNRES+  LKPLP K +DTG+G ER
Sbjct: 187 CSEIHYDRIGGRDAAHLVNMDDPNVLEIWNLVFIQFNRESETVLKPLPKKSIDTGMGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+F+P F+AIQ+ TGAR Y+GKVGA+D D +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFVPYFEAIQKGTGARAYTGKVGAEDTDGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A++DG  P N GR YVLRRILRRAVRY  E L AQ GFF  LV++VV+ +GD FPEL++
Sbjct: 307 IALSDGGRPDNTGRGYVLRRILRRAVRYSHEKLGAQRGFFASLVDVVVESLGDAFPELRK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
               +++II  EEA F KTL +G     +  Q +     + G  A++L+DTYGFPLDLT 
Sbjct: 367 DPDMVKDIINEEEAQFLKTLSRGRRILDRKIQSLGDSTTIPGDTAWLLYDTYGFPLDLTA 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
           L+AEERG+ VD+  F      A+ +S   Q K +G    I++D  A   L  +GV ATDD
Sbjct: 427 LIAEERGMGVDLLAFEEEKKAAQLKS---QGKGSGDEDHIMLDIYAIDELRNKGVAATDD 483

Query: 536 SFKFIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           S K+ +         F+     + A+     F++ V+ G E G++L  +SFYAEQGGQ F
Sbjct: 484 SPKYKYTSDDNGNYEFEQAVGTVLALRRERMFVDEVITGQECGVLLDKTSFYAEQGGQSF 543

Query: 587 DEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           DEG++     S      F V+N Q+ GG+V+HIG++    G   VG+ +   VD  RR+ 
Sbjct: 544 DEGYMLRENDSAEDRMEFTVKNTQVRGGYVLHIGTVY---GTLKVGDRLTLHVDEARRRP 600

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           I  NHT TH+LN+ LR VLG+  DQ+GS+V P++LRFDF+    +  + +RR E I    
Sbjct: 601 IMSNHTATHILNYGLRSVLGE-ADQRGSLVAPDRLRFDFTAKGAMSTDEVRRTEEIAAAM 659

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I     V++ +A LA AK I GLRAVF E YPDPVRVV+IG  VE+LLADP +      S
Sbjct: 660 IADAKGVYALDAPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVEELLADPNSPAGSLTS 719

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSL--------- 811
            E CGGTHL N+  A  F ++SEE IAKGIRRI AVT   A KA   A +L         
Sbjct: 720 IEFCGGTHLQNSSHAAPFVIVSEEAIAKGIRRIVAVTGAEAQKAQRKADALKLSLDALAE 779

Query: 812 ------------EKEVDDASKIEGSLL----EKNQVRKAQKKVAE--ENLQKAVK----- 848
                       +KE+ D ++  G+ +     K+++R++ K + +  ++L +A K     
Sbjct: 780 KVKAQSIPNKDVQKEIADMTESLGTAVISQWRKDEMRESLKGLKKIMDDLDRASKADVQK 839

Query: 849 -VATETAEAAASN-GKPFCISRVEVGLDAAAVREAVLKVIEQKG--MPVMVFSTDETTNK 904
            V  +T E   SN  +P  +  +E G  A A+ E+ LK+++        M+F+ D    K
Sbjct: 840 RVLEKTKEIIESNPNQPLIVMEMESGASAKALNES-LKMLKTNSPQTAAMLFTVDNDAGK 898

Query: 905 AVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAA 964
            +    VP+    ++ L+ SEW+      L G+ G GK   A   G +   +  A+ LA+
Sbjct: 899 IICLCQVPQDV-ANRGLKASEWVQEVCPLLDGK-GGGKDMSAQATGRNTQCIQEALQLAS 956

Query: 965 EFAAMKL 971
           EFA +KL
Sbjct: 957 EFARLKL 963


>gi|336371860|gb|EGO00200.1| hypothetical protein SERLA73DRAFT_107224 [Serpula lacrymans var.
           lacrymans S7.3]
 gi|336384611|gb|EGO25759.1| hypothetical protein SERLADRAFT_361256 [Serpula lacrymans var.
           lacrymans S7.9]
          Length = 956

 Score =  859 bits (2219), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 468/951 (49%), Positives = 597/951 (62%), Gaps = 51/951 (5%)

Query: 58  WPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLS 117
           W A KVRD FF +F  K H    SS  +P  DPTLLFANAGMNQYK IFLGT DPN+ ++
Sbjct: 9   WTAHKVRDEFFNYFRSKGHTFVPSSATIPYEDPTLLFANAGMNQYKSIFLGTVDPNSDMA 68

Query: 118 KLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTK 177
           KL RA N+QKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK EAIE++WELLT+
Sbjct: 69  KLKRAFNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIEYSWELLTE 128

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWL-KFLPASRVLPFGCKDNFWEMGDTGPC 236
           VY LP DRLY TYF GD K GL  D EAR  W  + +    +LP   KDNFWEMG TGPC
Sbjct: 129 VYGLPKDRLYVTYFEGDSKNGLQADEEARQYWRDRGVAEDHILPGNAKDNFWEMGATGPC 188

Query: 237 GPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGF 296
           GPCSEIH+DR G R+AA LVN DDP  +EIWN VFIQFNRE DGSLK LP+KHVDTG+GF
Sbjct: 189 GPCSEIHFDRIGGRNAAHLVNQDDPDVLEIWNNVFIQFNREEDGSLKSLPSKHVDTGMGF 248

Query: 297 ERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRT 356
           ERL S++Q+K SNYDTDVF PIFD IQ+ TG RPY+GK G +DAD +D AYRVVADH+RT
Sbjct: 249 ERLVSVVQDKRSNYDTDVFTPIFDKIQELTGVRPYAGKFGDEDADGIDTAYRVVADHVRT 308

Query: 357 LSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFPE 415
           LSFA++DG  P N GR YVLRRILRR  RY  + L    G FF+ L+ +VV+ MGDVFPE
Sbjct: 309 LSFALSDGGVPNNVGRGYVLRRILRRGSRYARKKLNVPIGSFFSSLMPVVVETMGDVFPE 368

Query: 416 LKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTYGFP 472
           L ++   I+EI+  EE SF +TL +G    +++   AQ    K L+G+D + L+DTYGFP
Sbjct: 369 LTKKVDEIKEILDEEEESFSRTLDRGEKLFDQYASRAQQQSTKELNGKDVWRLYDTYGFP 428

Query: 473 LDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL- 531
           +DLT+LMAEE  L ++ + F  A + +++ S+    K +   I +D    AAL K   + 
Sbjct: 429 VDLTRLMAEELHLGINDKEFEEAQEASKQASKGTLKKDSHPVIKLDVHDIAALEKNDAIP 488

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESV--VPGNEV-GIVLASSSFYAEQGGQIFDE 588
            TDDS KF    +  + +K IY    F ES   +P +   G++L  +SFYAE GGQ +D 
Sbjct: 489 KTDDSAKF-QLGNIMAQVKGIYYNKNFFESTSSIPEDTTFGVLLDRTSFYAESGGQEYDT 547

Query: 589 G--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
           G   I+G+   F V NVQ + G+V+HIG L    G+  +G+EV+   D  RR  +  NHT
Sbjct: 548 GNIVIDGV-SDFEVTNVQSFNGYVLHIGHLK--YGKLDIGDEVVSSYDELRRWPLRSNHT 604

Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD 706
            TH+LNF LREVLGDH+DQKGS+V P KLRFDFSH   +    L +IES+  + IK  + 
Sbjct: 605 ATHILNFGLREVLGDHIDQKGSLVAPTKLRFDFSHKSQISLPELTKIESMSLDWIKKNVK 664

Query: 707 VFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGG 766
           V+SKE  L  A+ I GLRAVFGE YPDPVRVV +   V+D+  D EN +W + S E CGG
Sbjct: 665 VYSKELDLKSAQQIPGLRAVFGESYPDPVRVVTLEFDVDDMAKDIENPKWRNTSVEFCGG 724

Query: 767 THLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGS-- 824
           TH++ T + + F +  E GIAKGIRRITAVT   A++A   A + +  +D    + G   
Sbjct: 725 THVAKTGDIKDFVITEESGIAKGIRRITAVTGQEAHEAARQANAFKARLDQLEAMSGKDK 784

Query: 825 -------LLEKNQ-----VRKAQKKVAEENLQKAV-----------------KVATETAE 855
                   +E  Q     +RKA+ K     ++KA                   +     E
Sbjct: 785 DAGLKALTVELGQADISVIRKAELKDRLATVRKAFDKQIKEKEAAANKAAIDALVHHFDE 844

Query: 856 AAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKS 915
              + G  F I  ++V  +A    + V+   ++ G  V VFS D    K      VPE +
Sbjct: 845 NKNAEGY-FAI--LDVDGNAKKSLQNVVTQGKKLGKAVYVFSVDADNTKVAHANHVPEAA 901

Query: 916 DQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEF 966
            ++K L+   W +   + L G+ G GK   A G G +  +   A+  A +F
Sbjct: 902 -KAKGLDARVWASKVTEVLGGKAG-GKEDGAQGVGVNCGKAEEALSAAKDF 950


>gi|402593881|gb|EJW87808.1| alanyl-tRNA synthetase [Wuchereria bancrofti]
          Length = 922

 Score =  859 bits (2219), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 472/930 (50%), Positives = 604/930 (64%), Gaps = 36/930 (3%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR  F  FF+D+ H    SS V+P +DPTLLFANAGMNQYKPIFLGT +P+++++KL R
Sbjct: 8   EVRAAFINFFKDREHTYVHSSSVIPFDDPTLLFANAGMNQYKPIFLGTVEPSSEMAKLKR 67

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFGDYFK E   WAWELLTKV  +
Sbjct: 68  AVNTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKLEVCNWAWELLTKVLGI 127

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGPCS 240
           P +RLY +YFGGDEKAGL  D E R IWL   +P+S +L FG KDNFWEMGD GPCGPCS
Sbjct: 128 PGERLYVSYFGGDEKAGLDADEECRQIWLNIGVPSSHILSFGMKDNFWEMGDVGPCGPCS 187

Query: 241 EIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLT 300
           EIHYDR GNRDA+ LVN DDP  +EIWN+VF+QFNRE DGSLK LP KH+D GLGFERL 
Sbjct: 188 EIHYDRVGNRDASHLVNADDPMVVEIWNLVFMQFNREEDGSLKQLPRKHIDCGLGFERLV 247

Query: 301 SILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFA 360
           ++LQNK+SNYDTD+F P+F AI   T  RPYSGKVGADD D +DMAYRVVADHIRTLS A
Sbjct: 248 AVLQNKLSNYDTDIFTPLFSAIHNGTKVRPYSGKVGADDVDGIDMAYRVVADHIRTLSIA 307

Query: 361 IADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQRE 420
           ++DG  P N GR YVLRRILRR +RY +E L A  GF + LV  VV ++G  FPEL +  
Sbjct: 308 LSDGGRPDNTGRGYVLRRILRRGIRYANEKLSAPPGFLSSLVPTVVNLLGKTFPELHKDP 367

Query: 421 AHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG-KVLSGQDAFILWDTYGFPLDLTQLM 479
             + +II  EE  F KTL +G   F+KA   +QG  +L G  A+ L+DTYGFPLDLTQLM
Sbjct: 368 QAVMDIINDEEKQFLKTLSRGRTLFQKAVAGLQGHNILPGDVAWRLYDTYGFPLDLTQLM 427

Query: 480 AEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSFKF 539
           AEERGL+VD E F N   +A   S +  NK     I +D +A + L  +G+ ATDDS K+
Sbjct: 428 AEERGLVVDFEVFENCRQQAAGISAAHANKMR-DTIDLDVNAISELKNKGIPATDDSPKY 486

Query: 540 IW-------------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
            +             F+  + +I A+     F++++  G+   ++L  ++FYAEQGGQIF
Sbjct: 487 KYHALSSEDEQTLYNFEKCEGIILALRKDKIFLDTLNSGDFGALILDRTNFYAEQGGQIF 546

Query: 587 DEGFIEGL--FGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           D G +  +     F V NVQI GG+V+ +G++    G  SVG+ VI  +D DRR LI  N
Sbjct: 547 DTGVLTEVDKGSEFIVSNVQIRGGYVVLVGTV---EGELSVGDRVIQAIDEDRRNLIMKN 603

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           HT TH+LNFALR+V+G+ V+QKGS+V P++LRFD +  +P+  E +R +E      I   
Sbjct: 604 HTGTHVLNFALRKVIGE-VEQKGSLVAPDRLRFDLTAKQPLTSEQIRMVEEESQMLIDTN 662

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
             VF++ A LAEA+ INGLRA     YPDPVR+V++G  +E+LL + ++   ++ + E C
Sbjct: 663 ARVFAENAPLAEARQINGLRA----AYPDPVRIVSVGVPIEELLRNKDSDLAVNTAVEFC 718

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDA-SKIEG 823
           GGTHL N        +  EE IAKGIRRI A+T   A +A   A  LE+ V+D  +KI  
Sbjct: 719 GGTHLHNVGHIGKLVITVEEAIAKGIRRIIALTGPEASRAIHRADRLEQRVEDTHNKIAT 778

Query: 824 SLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAAS--NGKPFCISRVEVGLDAAAVREA 881
             +    V KAQ K A + + +  +V  E +E  AS  +G  F +     G +   V ++
Sbjct: 779 DYIV--TVDKAQFKAATKRVLELFEVQREASELDASLKDGTLFTVHVFSKGAN-GKVLDS 835

Query: 882 VLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKG 941
            LK I +K    M FS ++  +  VV      K   SK L+ SEW++   + L GR G G
Sbjct: 836 ALKSI-RKSHATMGFSVND--DGKVVAVARVSKDVASKGLQASEWISRVCKVLDGR-GGG 891

Query: 942 KGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
               A   G +A  V  A  +A +FA + L
Sbjct: 892 TITQAQATGNNAELVEEAAQIALKFAEVTL 921


>gi|340370456|ref|XP_003383762.1| PREDICTED: alanyl-tRNA synthetase, cytoplasmic-like isoform 1
           [Amphimedon queenslandica]
          Length = 966

 Score =  858 bits (2216), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 451/963 (46%), Positives = 611/963 (63%), Gaps = 62/963 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A  +R  F  FF  K+H    SS  +PV+DPTLLF NAGMNQ+KPIF GT DP++  + L
Sbjct: 7   AKDIRRMFIDFFRSKDHTFVPSSSTIPVDDPTLLFTNAGMNQFKPIFQGTVDPSSDFATL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA N+QKCIRAGGKHNDLDDVGKDTYHHTFFEM+GNWSFGDYFK EAI+ AW  LT+  
Sbjct: 67  SRAANSQKCIRAGGKHNDLDDVGKDTYHHTFFEMMGNWSFGDYFKEEAIKMAWSFLTESL 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
           +LP DRLY TYFGGDEK  L  D+E ++IWL   LP  RVLPF  KDNFWEMG+ GPCGP
Sbjct: 127 KLPKDRLYVTYFGGDEKLKLPADDECKEIWLNTGLPPERVLPFSVKDNFWEMGEVGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G R  A  VN DDP  +E+WN+VF+QFN+ESDGS+KPLP  +VDTGLG ER
Sbjct: 187 CSEIHYDRIGGRFVADRVNMDDPNVLELWNVVFMQFNKESDGSIKPLPKNNVDTGLGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           + S++Q K SNYDTD+F+PIFDAI+  TG+R Y+GK+GA+D D VDMAYRVVADHIRTL+
Sbjct: 247 IVSVVQGKFSNYDTDLFLPIFDAIEAKTGSRSYTGKIGAEDVDGVDMAYRVVADHIRTLT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            AI+DG  P   GR YVLRRILRR VRY +E L A+ G F  LV  V+ V+G+ FPE+ +
Sbjct: 307 IAISDGGKPDATGRGYVLRRILRRGVRYITEKLNAKPGTFASLVPTVLDVLGEAFPEITK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQL 478
               + + I  EE  F KTL  G   F++  + ++  +L G  A+ L+DTYGFP+DLTQL
Sbjct: 367 DPEMVMDTINEEEKQFLKTLSHGKRMFERKLRKIENNLLPGDVAWRLYDTYGFPVDLTQL 426

Query: 479 MAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSFK 538
           MAEER + VD+EG+  A   A+E++R    ++   ++ +D  A + L  +GV  T+DS K
Sbjct: 427 MAEERQVTVDMEGYEKAKAMAQEKARGT-GREIDESLQLDVHAISHLQSKGVPPTNDSSK 485

Query: 539 FIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEG 589
           + +         FQ  +  + A+    EF++ V  G  VG++   + FYAEQGGQI+DEG
Sbjct: 486 YDYSSDESGNYKFQSCEGSVIALRYNKEFVDEVSSGQVVGVLTDKTCFYAEQGGQIYDEG 545

Query: 590 FIEGLF---GSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
           +I  +      F VR+VQ+ GG+V+H+GS+    G   VG++V   +D DRR  +  NHT
Sbjct: 546 YIVKIGEEETEFIVRDVQVRGGYVLHVGSI---EGTLRVGDKVNMTIDGDRRSDVMKNHT 602

Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD 706
            TH+LNFALR V+G+  DQKGS+V P++LRFDFS    +  + +++ E +  E IKA   
Sbjct: 603 GTHVLNFALRRVIGE-ADQKGSLVAPDRLRFDFSAKGAMKTDQIKKCEEVALEVIKASHP 661

Query: 707 VFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGG 766
           V+++E  L  AK I GLRAVF EVYPDPVRV++IG  V+ L+ DP     ++ S E CGG
Sbjct: 662 VYAQETPLPVAKEIQGLRAVFDEVYPDPVRVLSIGVPVDKLVEDPSGPWAINYSVEFCGG 721

Query: 767 THLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVD---------- 816
           THL ++   ++FA+++EE IAKGIRRI A+T   A KA + A  +++ VD          
Sbjct: 722 THLRSSGHIQSFAIVTEEAIAKGIRRIVALTGMEAVKAHKRAAVIQERVDALCSTVLNGL 781

Query: 817 --------DASKI---EGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFC 865
                   +A+K+   EG  L    + +  K    E L  A K A E  +AA       C
Sbjct: 782 STKSMAPKEANKLIVKEGDALSSAVISQWIKDELREKLNTAKKSADEADKAAKELLTQKC 841

Query: 866 ISRVE--VG-LDAAAVREAVLKVIEQKGMP------------------VMVFSTDETTNK 904
           I R +  +G  D A+    V+++ E +G+                    ++ S D   +K
Sbjct: 842 IERAQELIGQFDKASPPSFVVEIFEAEGLSKALDNALKQFKSLAPTVAALLLSVDHDNHK 901

Query: 905 AVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAA 964
            +  + VP K+  +K L+ +EW+ A    + G+ G G+   A   GT+  +++ A+++A 
Sbjct: 902 ILCLSNVP-KNAIAKGLKANEWVQAVSVTIGGKGG-GRDNTAQATGTNVGKLSDAVEVAK 959

Query: 965 EFA 967
           +FA
Sbjct: 960 QFA 962


>gi|398397461|ref|XP_003852188.1| alanine--tRNA ligase [Zymoseptoria tritici IPO323]
 gi|339472069|gb|EGP87164.1| hypothetical protein MYCGRDRAFT_100210 [Zymoseptoria tritici
           IPO323]
          Length = 960

 Score =  858 bits (2216), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 446/834 (53%), Positives = 564/834 (67%), Gaps = 47/834 (5%)

Query: 45  VAAMPGADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKP 104
           +A+  G +P   EW A KVR TF  +F+   H    S  VVP++DPTLLF NAGMNQYK 
Sbjct: 1   MASTTGTEP---EWSAVKVRSTFIDYFKQNGHTFVPSGSVVPLSDPTLLFTNAGMNQYKS 57

Query: 105 IFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK 164
           IFLGT DP++  +KL RA N+QKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK
Sbjct: 58  IFLGTVDPDSDFAKLKRAANSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFK 117

Query: 165 NEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGC 223
            EAI ++W+LLTKVY L  +RLY TYF G   AGL PD EARD+WLK  +P   +L    
Sbjct: 118 KEAITFSWDLLTKVYGLKPERLYVTYFEGKADAGLEPDLEARDLWLKAGVPEDHILTGDM 177

Query: 224 KDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLK 283
           KDNFWEMGD GPCGPCSEIHYDR G R+A+ LVN DDP  IEIWN VFIQ+NRE D SLK
Sbjct: 178 KDNFWEMGDQGPCGPCSEIHYDRIGGRNASDLVNQDDPNVIEIWNNVFIQYNREPDKSLK 237

Query: 284 PLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKV 343
            LP KH+DTG+GFERL SILQ+K SNYDTDVF P+F  IQ+ TGAR Y G  G +DAD V
Sbjct: 238 SLPNKHIDTGMGFERLVSILQDKSSNYDTDVFTPLFKTIQEITGAREYRGTFGEEDADGV 297

Query: 344 DMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLV 402
           D AYRVVADH+R L+FAI DG  P N GR YV+RR+LRR  RY  +    + G FF+ +V
Sbjct: 298 DTAYRVVADHVRLLTFAITDGGIPNNVGRGYVVRRVLRRGARYARKYFNTEIGDFFSKIV 357

Query: 403 NIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ---GKVLSG 459
             +V  MGD+FPE+K++EA ++EI+  EE SF KTL +G   F+K A+  +    K +SG
Sbjct: 358 PTLVAQMGDMFPEIKKKEADVKEILNEEELSFAKTLDRGEAMFEKYAEQCKAKGAKEMSG 417

Query: 460 QDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAI---- 515
            D + L+DTYGFP+DLT+LMAEERGL ++ E    A ++ARE S+    K+AG  +    
Sbjct: 418 ADVWRLYDTYGFPVDLTKLMAEERGLDINEEDVKEAQEKAREASKG--EKKAGAELVKLN 475

Query: 516 VMDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESV--VP-GNEVGIVL 572
           V D +A A +    V  TDDS KF    + K+ IKAIY G +F++S   VP G + G+VL
Sbjct: 476 VHDINALAKMED--VPKTDDSPKF-QKANIKAHIKAIYHGGKFVQSTSEVPEGEQFGVVL 532

Query: 573 ASSSFYAEQGGQIFDEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVI 630
             ++FYAEQGGQ  D G   I+G      V+NVQ+Y G+V+H G +  G+    + +E++
Sbjct: 533 DRTNFYAEQGGQENDTGRILIDGE-AEIDVQNVQLYAGYVMHTGYMNYGS--LKINDEIL 589

Query: 631 CKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHL 690
           C+ D  RR+ I  NHT TH+LNFALREVLGD ++QKGS+V PEKLRFDFSH   V  + L
Sbjct: 590 CEYDELRRQPIRNNHTGTHILNFALREVLGDDINQKGSLVAPEKLRFDFSHKSGVSDDEL 649

Query: 691 RRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLAD 750
            +IE +    I+   +V++K+ +LA A+ I+G+RAVFGE YPDPVRVV+IG  VEDLL D
Sbjct: 650 LKIEELTTSYIRQNSEVYAKDVSLATAREISGVRAVFGETYPDPVRVVSIGVPVEDLLED 709

Query: 751 PENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVT------------- 797
           P+N +W  +S E CGGTH+ NT E +   +L E GIAKGIRRI  VT             
Sbjct: 710 PKNNDWTKVSVEFCGGTHVKNTTEIKDLVVLEESGIAKGIRRIVCVTGQTAQEVQRLAQQ 769

Query: 798 --------TGLAYKAFEAACSLEKEVDDASKIEGSLLEKNQVRKAQKKVAEENL 843
                     L Y A + A + E +  + +K+E S L K ++R+   K+ + NL
Sbjct: 770 WDDKVAHLDSLPYSAEKEAQTKESQ-HELNKLEISALAKTKLRERFAKIVKANL 822


>gi|112984224|ref|NP_001037452.1| alanine--tRNA ligase, cytoplasmic [Bombyx mori]
 gi|135089|sp|P21894.1|SYAC_BOMMO RecName: Full=Alanine--tRNA ligase, cytoplasmic; AltName:
           Full=Alanyl-tRNA synthetase; Short=AlaRS
 gi|155955|gb|AAA27821.1| transfer RNA-Ala synthetase [Bombyx mori]
          Length = 967

 Score =  858 bits (2216), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 464/968 (47%), Positives = 605/968 (62%), Gaps = 64/968 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
             ++R TF  FF  K H    SS  +P++DPTLLFANAGMNQ+KPIFLG+ DPN+ +++ 
Sbjct: 7   GNEIRKTFIDFFIKKGHKYVHSSSTIPLDDPTLLFANAGMNQFKPIFLGSVDPNSDMAQY 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  NTQKCIRAGGKHNDLDDVGKD YHHTFFEM+GNWSFGDYFK E   WAWELLT V+
Sbjct: 67  IRVVNTQKCIRAGGKHNDLDDVGKDVYHHTFFEMMGNWSFGDYFKKEICAWAWELLTDVF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
           +L  +RLY TYF GD  +GL PD E R+IWL   +P + +LP   KDNFWEMG+TGPCGP
Sbjct: 127 KLSRERLYVTYFEGDPSSGLEPDLECRNIWLNLGVPEAHILPGSMKDNFWEMGETGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSE+HYDR G+R+AA LVN DDP  +EIWN+VFIQFNRE+DGSLK LP KH+D GLG ER
Sbjct: 187 CSELHYDRIGDREAAHLVNMDDPDVLEIWNLVFIQFNRETDGSLKLLPTKHIDCGLGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S++QNK +NYDTD FMPIF AI+ ATG RPYSGKVG DD D +DMAYRV+ADH RTL+
Sbjct: 247 LVSVIQNKRANYDTDFFMPIFKAIENATGVRPYSGKVGVDDVDGIDMAYRVLADHARTLT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A++DG CP N GR YVLRRILRRAVRY SE L A+ GFF  LV  VV+++GDVFPE+K+
Sbjct: 307 IALSDGGCPDNTGRGYVLRRILRRAVRYASEKLNAKPGFFGSLVYTVVELLGDVFPEIKK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG-KVLSGQDAFILWDTYGFPLDLTQ 477
               I  +I  EE  F KTLL+G     +  + +   K L G  A+ L+DTYGFP+DLTQ
Sbjct: 367 DPDSIVHVINEEEVQFLKTLLRGRNLLYRTIEKLNNSKTLPGDVAWRLYDTYGFPIDLTQ 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAG--GAIVMDADATAALHKRGVLATDD 535
           LM EE+GL VD+EG+  +  E++  S   Q K AG    I +D  A + L   G+ ATDD
Sbjct: 427 LMCEEKGLNVDMEGYEKSRKESQLVS---QGKAAGQEDLIALDVHAISHLQDTGIPATDD 483

Query: 536 SFKFIW------------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGG 583
           S K+ +            F    + I A+    EF+  +  G E G++L  +SFYAEQGG
Sbjct: 484 SPKYNYLPSSTDKDALYTFAPCTAKIVALRKNKEFVSEISSGQECGVILDRTSFYAEQGG 543

Query: 584 QIFDEGF---IEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           QIFDEG+   I+     F V+NVQ+ GG+V+H G +    G   VG+ +   +D +RR+L
Sbjct: 544 QIFDEGYMVKIDDETVEFTVKNVQVKGGYVLHAGKV---EGILKVGDTLSLHIDTERRRL 600

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           +  NHT TH+LN  LR+VLG+  DQ+GS+V+P++LRFDF++  P+  + ++  E+ + E 
Sbjct: 601 VMNNHTGTHVLNNVLRKVLGNDSDQRGSLVMPDRLRFDFTNKGPMTIKQIKDTENEIKEI 660

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I     V++   +L+EAK INGLRA+F E YPDPVRVV++G  VEDL+ +P+       S
Sbjct: 661 IAKNKTVYANYTSLSEAKKINGLRAMFDEHYPDPVRVVSVGVPVEDLIKNPDAPTGFETS 720

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK 820
            E CGG+HL  T     + ++SEEGIAKGIRRI AVT   A KA      LE EV++ + 
Sbjct: 721 VEFCGGSHLHRTSHIGEYVIVSEEGIAKGIRRIVAVTGPEAIKAINKLSVLENEVNNVAN 780

Query: 821 I----EGSLLEK----------NQVRKAQ----KKVAEENLQKAVKVATETAEAA----- 857
                  S+  K          N++ +AQ    KK    N+ K +K   +  E A     
Sbjct: 781 FIKEQNESISHKEVSKKIVDLTNEISQAQISYWKKDELRNMLKNLKKQLDDKERAEKAII 840

Query: 858 ----ASNGKPFCISRVEVGLDAAAVR--------EAVLKVIEQ--KGMPVMVFSTDETTN 903
                   K  C+ R E     + ++        +  LK ++Q       M FS D+  +
Sbjct: 841 ITQVTEKAKELCLERKESKYIVSELKAFGNTKALDGALKQVKQFCPNSAAMFFSVDKDAD 900

Query: 904 KAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLA 963
           K    A VP KSD  K L  SEW+ + +  + G+ G      A   G +   +  A+ +A
Sbjct: 901 KIYCLAAVP-KSDVEKGLLASEWVQSVVDIIGGKGGGKAES-AQASGNNPNSLNEAIQIA 958

Query: 964 AEFAAMKL 971
            E+A  KL
Sbjct: 959 NEYAKSKL 966


>gi|312069509|ref|XP_003137715.1| alanyl-tRNA synthetase [Loa loa]
 gi|307767125|gb|EFO26359.1| alanyl-tRNA synthetase [Loa loa]
          Length = 967

 Score =  858 bits (2216), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 472/967 (48%), Positives = 607/967 (62%), Gaps = 65/967 (6%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R TF  FF+D+ H    SS V+P +DPTLLFANAGMNQYKPIFLGT +P+++++KL R
Sbjct: 8   EIRATFINFFKDREHTYVHSSSVIPFDDPTLLFANAGMNQYKPIFLGTVEPSSEMAKLKR 67

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFGDYFK E   WAWELLTKV  +
Sbjct: 68  AVNTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKLEVCNWAWELLTKVLGI 127

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGPCS 240
           P +RLY +YFGGD+K GL  D E R IWL   +P S +L FG KDNFWEMGD GPCGPCS
Sbjct: 128 PGERLYVSYFGGDDKTGLDADEECRQIWLNIGVPPSHILSFGMKDNFWEMGDVGPCGPCS 187

Query: 241 EIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLT 300
           EIHYDR G+RDA+ LVN DDP  +EIWN+VFIQFNRE DGSLK LP KH+D GLGFERL 
Sbjct: 188 EIHYDRIGDRDASHLVNADDPMVVEIWNLVFIQFNREEDGSLKQLPHKHIDCGLGFERLV 247

Query: 301 SILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFA 360
           ++LQNK+SNYDTDVF P+F AI   T  RPYSGKVGADD D +DMAYRVVADHIRTL  A
Sbjct: 248 AVLQNKLSNYDTDVFTPLFSAIHNGTKVRPYSGKVGADDVDGIDMAYRVVADHIRTLCIA 307

Query: 361 IADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQRE 420
           ++DG  P N GR YVLRRILRR +RY +E L A  GF + LV  VV ++G  FPEL +  
Sbjct: 308 LSDGGRPDNTGRGYVLRRILRRGIRYANEKLSATPGFLSSLVPTVVNLLGKTFPELHKDP 367

Query: 421 AHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK-VLSGQDAFILWDTYGFPLDLTQLM 479
             + +II  EE  F KTL KG   F+KAA  +Q + +L G  A+ L+DTYGFPLDLTQLM
Sbjct: 368 QTVMDIINDEEKQFLKTLNKGRTLFQKAATRLQERNILPGNVAWRLYDTYGFPLDLTQLM 427

Query: 480 AEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSFKF 539
           AEERGLL+D E F N   +A E S +  NK    AI +D  A + L  +G+  TDDS K+
Sbjct: 428 AEERGLLIDFEAFENCRQQAAEISAARANKMR-DAIDLDVSAISELKNKGIPVTDDSPKY 486

Query: 540 IW-------------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
            +             F+  + +I A+     F++++   +   I+L  ++FYAEQGGQ+F
Sbjct: 487 KYYPLPPENQQTMYNFEKCEGIILALRKDKIFVDTLNSEDFGAIILDRTNFYAEQGGQLF 546

Query: 587 DEGFIEGL--FGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           D G +  +     F V NVQI GG+V+ +G++    G  SVG++VI  +D +RR LI  N
Sbjct: 547 DTGVLREVDKGSEFIVSNVQIRGGYVVLVGTV---EGELSVGDKVIQAIDEERRNLIMKN 603

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           HT TH+LNFALR+V+G+ V+QKGS+V P++LRFD +  +P+  E ++ +E      I   
Sbjct: 604 HTGTHVLNFALRKVVGE-VEQKGSLVAPDRLRFDLTSKQPLTYEQIKIVEEESQMLIDTN 662

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
             VF+K A LAEA+ INGLRAVF E YPDPVR+V++G  +E+LL D +    ++ + E C
Sbjct: 663 ATVFAKNAPLAEARQINGLRAVFEEAYPDPVRIVSVGVPIEELLKDKDGDLAVNTAVEFC 722

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGS 824
           GGTHL N        +  EE IAKGIRRI A+T   A++A   A  +E+ V++A     +
Sbjct: 723 GGTHLHNVGHIGKLVITVEEAIAKGIRRIIALTGPEAFRAIHRADRIEQRVEEAHNEIAT 782

Query: 825 ----LLEKNQVRKAQKKVAE----------------------ENLQKAVKVATETAEAAA 858
                L+K Q + A K++ +                      + LQK + +    A+AA 
Sbjct: 783 DRIVTLDKTQFKTASKRIHDLFEEINQSQLPYCRKESIRKKAKALQKLLDMRDREAKAAV 842

Query: 859 S--------------NGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNK 904
           +              NG       +        V +  LK I +K   VM FS ++   K
Sbjct: 843 TDKVQQEARELDASLNGDTLYTVHIFSKGANGKVLDGALKSI-KKSHAVMGFSINDDIGK 901

Query: 905 AVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAA 964
            VV A V  K   +K L+ SEW++   + L GR G G    A   G +   V  A  +A 
Sbjct: 902 VVVVARV-SKDVANKGLQASEWISKVCRVLDGR-GGGTVIQAQATGNNTELVEEAAQIAL 959

Query: 965 EFAAMKL 971
           +FA + L
Sbjct: 960 KFAEVTL 966


>gi|405121271|gb|AFR96040.1| alanine-tRNA ligase [Cryptococcus neoformans var. grubii H99]
          Length = 1012

 Score =  857 bits (2215), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 481/997 (48%), Positives = 630/997 (63%), Gaps = 50/997 (5%)

Query: 10   TASFVATARVLLNPSLTLAVTNHHHSLISRFSASAVAAMPGADPQVVEWPATKVRDTFFK 69
            T+ F    R+L   S T++  +    + +    +     P A P   +WPA KVR TF  
Sbjct: 12   TSHFKFVPRLLSKTSFTVSTQSSLKKMGANDKPTVPTTAPHAWPSPEDWPAAKVRQTFID 71

Query: 70   FFEDK---NHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRACNTQ 126
            +F ++    H  W SS V+P +D TLLFANAGMNQYKP+FLGTADP ++LSKL RA N+Q
Sbjct: 72   YFVNQPGFEHTFWPSSGVIPFDDDTLLFANAGMNQYKPLFLGTADPKSELSKLIRAANSQ 131

Query: 127  KCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLPADRL 186
            KCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK  A+  AW+LLT+VY LP DRL
Sbjct: 132  KCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKVGALTMAWDLLTRVYGLPKDRL 191

Query: 187  YATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGPCSEIHYD 245
            Y TYF GD K GL PD+EA+ IW    +P S +LP   KDNFWEMG TGPCGPCSEIH+D
Sbjct: 192  YVTYFEGDAKQGLEPDSEAQQIWRDLGVPESHILPGNAKDNFWEMGATGPCGPCSEIHFD 251

Query: 246  RTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQN 305
            R G R+AA LVN DDP  +EIWN VFIQ+NRE  G L+ LPAKHVDTG+GFERL S+L N
Sbjct: 252  RIGGREAAHLVNADDPNVLEIWNNVFIQYNREPSGELRTLPAKHVDTGMGFERLVSVLHN 311

Query: 306  KMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGS 365
              SNYDTDVF PIF  IQ+ TGARPY GK+G +D D +D AYRV+ADHIRTL+ AI+DG 
Sbjct: 312  VSSNYDTDVFTPIFSKIQELTGARPYEGKLGDEDKDGIDTAYRVIADHIRTLTIAISDGG 371

Query: 366  CPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFPELKQREAHIR 424
             P  +GR YVLRR+LRR VRY S     + G FF+ LV  VV+ +G +FPE+ ++   + 
Sbjct: 372  IPDKDGRGYVLRRVLRRGVRYASNKFGVKIGTFFSSLVPTVVESLGSIFPEVTKKIPELI 431

Query: 425  EIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQLMAE 481
            EI+  EEASF +TL +G     K+   A D +  VLSG+D + L+DTYGFP+DLTQ+MAE
Sbjct: 432  EILNEEEASFARTLNRGEALFNKYATTAIDEKRTVLSGKDIWRLYDTYGFPVDLTQIMAE 491

Query: 482  ERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR-GVLATDDSFKFI 540
            ERGL +D E F  A  E+ E S++   ++AG  + +D    AAL     V  TDDSFK+ 
Sbjct: 492  ERGLKIDQEAFEKARLESLEASKAGGKEKAGALVKLDVHDLAALEANDAVPKTDDSFKY- 550

Query: 541  WFQDHKSVIKAIYTGSEFIES---VVPGNEVGIVLASSSFYAEQGGQIFDEGF--IEGLF 595
               D K+ +K+IY GS+F+ S   + P    GI+L  ++FYAE GGQ +D G   I+G  
Sbjct: 551  HLDDIKASVKSIYHGSKFLNSTSELPPNTTFGILLDRTNFYAESGGQEYDTGVIAIDGK- 609

Query: 596  GSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFAL 655
              F V +VQ+Y G+V+HIG + E  G   +G+EVIC  D  RR  I  NHT TH+LNFAL
Sbjct: 610  AEFKVEDVQVYNGYVLHIGRMEE--GDIEIGDEVICTYDELRRWPIRNNHTGTHILNFAL 667

Query: 656  REVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLA 715
            REVLGDH+DQKGS+V P KLRFDFSHGK +    L +IE I N+ IK  + V++K+  LA
Sbjct: 668  REVLGDHIDQKGSLVAPTKLRFDFSHGKSIAVPELIKIEGICNDWIKKGVPVYAKDMPLA 727

Query: 716  EAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREA 775
            EA  I GLRAVFGE YPDPVRVV++G  +ED+  + E+ +W   S E CGGTH++ T + 
Sbjct: 728  EAYKIPGLRAVFGEAYPDPVRVVSLGYPLEDIAKNVEDSKWRQTSIEFCGGTHVAKTDDI 787

Query: 776  EAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEG------------ 823
            + F ++ E  IAKGIRRI AVT   A+         E+++    +++G            
Sbjct: 788  KDFVIIEESSIAKGIRRIVAVTGHDAHDVSRKGVEFERKLQRIKELQGKEKEVAMKPFLV 847

Query: 824  -------SLLEKNQVRKAQKKVAEE-------NLQKAVKVATETAEA---AASNGKPFCI 866
                   SL++KN +++  +K+  E        +    K+ +E  +A      N   F  
Sbjct: 848  ELGQSGISLIKKNSLKEQFEKIQGELVAAAKAKVAADSKIISEAIKAYFQENPNENVFAG 907

Query: 867  SRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEW 926
            S  +VG ++  +  AV    +     V  FS D  T K      +P+   +SK L+   W
Sbjct: 908  S-FDVGGNSKTLTAAV-AAGKSASKAVYAFSADPETGKVAHVNYLPKPILESKALDAKLW 965

Query: 927  LTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLA 963
            L    + + G+ G G+   A+G G++ +++  A+ +A
Sbjct: 966  LNEVAKVIGGKGG-GRDDSAAGVGSEISKIDEAIVVA 1001


>gi|391342384|ref|XP_003745500.1| PREDICTED: alanine--tRNA ligase, cytoplasmic-like isoform 2
           [Metaseiulus occidentalis]
          Length = 975

 Score =  857 bits (2215), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 467/974 (47%), Positives = 615/974 (63%), Gaps = 69/974 (7%)

Query: 62  KVRDTFFKFFEDK-NHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLT 120
           +VR  F +FF+ K  H    SS V+P +DPTLLFANAGMNQYKPIFLGT DPNT+ +K  
Sbjct: 6   EVRTRFIEFFQKKYQHTFVPSSCVIPHDDPTLLFANAGMNQYKPIFLGTVDPNTEAAKWK 65

Query: 121 RACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYR 180
           R  N+QKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFGD+FK E   WAWE LTK + 
Sbjct: 66  RTVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDFFKKEICAWAWEFLTKEFG 125

Query: 181 LPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGPC 239
           L  DRLY TYFGG+ +AGL PDNE + IWL   +P   +LP   KDNFWEMG+TGPCGPC
Sbjct: 126 LAEDRLYVTYFGGNPEAGLEPDNECKGIWLALGVPEDHILPGSMKDNFWEMGETGPCGPC 185

Query: 240 SEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERL 299
           SEIH+DR G R+AA LVN DDP  +EIWN+VFIQ+NRE+D SL+PLP +HVDTG+GFERL
Sbjct: 186 SEIHFDRIGGRNAAHLVNMDDPDVLEIWNLVFIQYNREADSSLRPLPKQHVDTGMGFERL 245

Query: 300 TSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSF 359
            S++QNK SNYDTDVF+PIFDAIQ++TG R Y+GKVGA+D D +DMAYRV+ADH RTL+ 
Sbjct: 246 VSVIQNKRSNYDTDVFVPIFDAIQKSTGVRAYTGKVGAEDVDGIDMAYRVLADHARTLTI 305

Query: 360 AIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQR 419
           A++DG  P N GR YVLRRILRRA+RY +E + A+ G F GLV +VV ++GD FPELK+ 
Sbjct: 306 ALSDGGRPDNVGRGYVLRRILRRAIRYATEKMNAKPGMFAGLVPVVVGLLGDAFPELKKD 365

Query: 420 EAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ-GKVLSGQDAFILWDTYGFPLDLTQL 478
              + EII  EE  F KTL +G     KA   ++ G +L G+ A+ L+DTYGFP+DLTQL
Sbjct: 366 PDTVMEIINEEETQFLKTLSRGRRLLTKAVSKIEKGGLLPGEVAWRLYDTYGFPVDLTQL 425

Query: 479 MAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH-KRGVLATDDSF 537
           M EE G+ VD  G+  A   A   S+   +K A  +  +D  A A L  K+ + ATDDS 
Sbjct: 426 MVEESGIFVDSAGYEKAKQAAILASQGGADK-ADDSSKLDVHAIAELQDKQKLPATDDSP 484

Query: 538 KFIW------------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
           K+++            FQ     I AI +  +F+  V  G+  GIVL  ++FYAEQGGQI
Sbjct: 485 KYVYTAEGTGKSAKYTFQPCTGKIVAIRSKKQFVNGVNAGDLCGIVLDRTNFYAEQGGQI 544

Query: 586 FDEGFIEGLFG---SFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIA 642
           +D GF++ +      F V  V + GGFV+HIG L   AG   VG+E+  ++D  RR  + 
Sbjct: 545 YDTGFLQHVENEDVEFAVTEVHLQGGFVVHIGRL--AAGTLKVGDELKLQIDETRRVAVM 602

Query: 643 PNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIK 702
            NHT TH+LN+ALR+VL    DQ+GS+V PE++RFDF+  +P+  + +++ E    E + 
Sbjct: 603 QNHTGTHVLNYALRKVLSADADQRGSLVAPERMRFDFASNRPMTAQEVKQAEEAAVELVS 662

Query: 703 AELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAE 762
               V++K+++L++AK + GLRAVF E YPDPVRVV+IG  VEDLLA+P+  + L+ S E
Sbjct: 663 RNGPVYAKDSSLSQAKAVKGLRAVFNETYPDPVRVVSIGVSVEDLLANPDRGDALNTSVE 722

Query: 763 LCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDD----- 817
            CGGTHL N      F +  EE IAKGIRRI A+T   A KA + A  LE EV+      
Sbjct: 723 FCGGTHLQNAGHIGDFVIAQEEAIAKGIRRIMALTGTEAAKATKRAEHLESEVNTLKSLV 782

Query: 818 -ASKIEGSLLE--------------------------------KNQVRKAQKKVAEENLQ 844
              K+  SL                                  +++++K +K + +++ Q
Sbjct: 783 GKDKVRSSLFPSGNLGRSLVKRITELSDEISQSSISYWRKDDLRSELKKIKKVIDDQDKQ 842

Query: 845 KAVKVATETAEA-----AASNGKPFCISRVEVGLDAAAVREAVLKVIE--QKGMPVMVFS 897
                  E  E         +  P+ I +++VG +  A+ +AV+K I         M+FS
Sbjct: 843 NKAAAQMEALEEIKRVLGQGDAPPYLIRKLQVGGNGKAL-DAVMKQIRTLSPNASAMLFS 901

Query: 898 TDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVT 957
            DE   + V  + VP++    K L  SEW+      + G+ G GK   A   GT+   ++
Sbjct: 902 IDEEKKRLVCLSSVPKQVVADKGLSASEWVRHIADVIGGKGG-GKDESAQASGTNPEALS 960

Query: 958 PAMDLAAEFAAMKL 971
            AM++A EFA +KL
Sbjct: 961 EAMNMAEEFAKLKL 974


>gi|449268815|gb|EMC79652.1| Alanyl-tRNA synthetase, cytoplasmic [Columba livia]
          Length = 946

 Score =  857 bits (2214), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 465/967 (48%), Positives = 608/967 (62%), Gaps = 87/967 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A+++R  F  FF++  H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  L+KL
Sbjct: 7   ASQIRQRFIDFFKENEHTYVHSSSTIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPLAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A + A ELLTK +
Sbjct: 67  NRATNTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKLALELLTKEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +P +RLY TYFGG+E AGL PD E + IWL   L  SR+LP   KDNFWEMGDTGPCGP
Sbjct: 127 GIPTERLYVTYFGGNEAAGLQPDLECKQIWLNLGLAESRILPGNMKDNFWEMGDTGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G+RDA+ LVN DDP  +EIWN+VFIQFNRE+DG+LKPLP K +DTG+G ER
Sbjct: 187 CSEIHYDRIGDRDASHLVNQDDPNVLEIWNLVFIQFNREADGTLKPLPKKSIDTGMGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+F+P F+AIQ+ TGARPY G+VGA+DAD +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFLPYFEAIQKGTGARPYMGQVGAEDADGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A++DG  P N GR YVLRRILRRAVRY  E L A  GFF  LV++VV+ +GD FPELK+
Sbjct: 307 LALSDGGRPDNTGRGYVLRRILRRAVRYSHEKLNAPKGFFATLVDVVVQSLGDAFPELKK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQL 478
               +++II  EE  F KTL +G     +  Q              L D+   P      
Sbjct: 367 DPDMVKDIINEEEDQFLKTLSRGRRILDRKIQS-------------LGDSKTIP------ 407

Query: 479 MAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDDS 536
             EE+GL+VD+EGF      A+ +S   Q K AGG   +++D  A   L  RG+  TDDS
Sbjct: 408 --EEKGLVVDMEGFEEERKNAQLKS---QGKGAGGEDLLMLDIYAIEELRSRGLEVTDDS 462

Query: 537 FKFIWFQDHK---------SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFD 587
            K+ +  D           + +KAI    +F+E V  G E GIVL  + FYAEQGGQI+D
Sbjct: 463 PKYSYASDSSGAYDFGSLVATVKAIRREKKFVEEVSTGQECGIVLDRTCFYAEQGGQIYD 522

Query: 588 EGFI----EGLFGS--FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLI 641
           EG++    +G      F V+NVQ+ GG+V+HIG+L    G   VG++V   +D  RR+ +
Sbjct: 523 EGYMVKEDDGREDKTEFTVKNVQVRGGYVLHIGTLY---GNLKVGDQVCLSIDETRRRPV 579

Query: 642 APNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQI 701
             NHT TH+LNFALR VLG+  DQ+GS+V P++LRFDF+    +  + ++++E I N+ I
Sbjct: 580 MSNHTATHILNFALRSVLGE-ADQRGSLVAPDRLRFDFTAKGALSTQEIKKVEGIANQMI 638

Query: 702 KAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISA 761
           +    V++K+  LA AK I GLRAVF E YPDPVRVV+IG  VE+LLADP        S 
Sbjct: 639 EEAKTVYAKDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGIPVEELLADPSGPAGSVTSV 698

Query: 762 ELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSL---------- 811
           E CGGTHL N+  A  F ++SEE IAKGIRRI AVT   A KA     SL          
Sbjct: 699 EFCGGTHLQNSSHAGPFVIVSEEAIAKGIRRIVAVTGAEARKALRKVDSLKKLLSALEAK 758

Query: 812 -----------EKEVDDASKIEGSLL----EKNQVR---KAQKKVAEE-------NLQKA 846
                      +KE+ D S+   + +    +K+++R   KA KKV ++       ++QK 
Sbjct: 759 VKVQTAPNKDVQKEITDLSETLATAVIPQWQKDELREAVKALKKVMDDLDRASKADIQKR 818

Query: 847 VKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKG--MPVMVFSTDETTNK 904
           V   T+    +  N +PF I  +E G  A A+ E+ LK+ +        M+F+ D    +
Sbjct: 819 VLEKTKQVIESHPN-QPFVIMEMENGASAKALNES-LKLFKTYSPQTATMLFAVDNEAGR 876

Query: 905 AVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAA 964
                 VP+++  +K L+ S+W+      + G+ G GK   A   G +   +  A+ LA 
Sbjct: 877 ITCLCQVPQET-ANKGLKASQWVQEVSGLMDGK-GGGKDVSAQATGKNVGCLQQALKLAT 934

Query: 965 EFAAMKL 971
           +FA ++L
Sbjct: 935 DFATLRL 941


>gi|170092939|ref|XP_001877691.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164647550|gb|EDR11794.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 955

 Score =  857 bits (2214), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 465/947 (49%), Positives = 607/947 (64%), Gaps = 46/947 (4%)

Query: 53  PQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADP 112
           P  V W + +VR+ FF FF  KNH    SSP +P +DPTLLFANAGMNQYK IFLGT DP
Sbjct: 5   PSTVSWSSARVREEFFNFFRSKNHTFVPSSPTIPFDDPTLLFANAGMNQYKSIFLGTVDP 64

Query: 113 NTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAW 172
           N+ +S+L RA N+QKCIRAGGKHNDL+DVGKD+YHHTFFEMLGNWSFGDYFK EAI ++W
Sbjct: 65  NSDMSRLKRAFNSQKCIRAGGKHNDLEDVGKDSYHHTFFEMLGNWSFGDYFKKEAIAYSW 124

Query: 173 ELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWL-KFLPASRVLPFGCKDNFWEMG 231
           ELLT VY+LP DRLY TYF GD   GL PD EA+  WL + +    +LP   KDNFWEMG
Sbjct: 125 ELLTDVYKLPKDRLYVTYFEGDPNNGLEPDLEAKQYWLDQGVDEDHILPGNAKDNFWEMG 184

Query: 232 DTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVD 291
            TGPCGPC+EIH+DR G R+AA LVN DDP  +EIWN VFIQFNRE +GSLKPLP+KHVD
Sbjct: 185 ATGPCGPCTEIHFDRVGGRNAAHLVNQDDPDVLEIWNNVFIQFNREDNGSLKPLPSKHVD 244

Query: 292 TGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVA 351
           TG+GFERL SI+Q+K SNYDTDVF+PIFD I++ TG RPY G+  ADD D +D AYRVVA
Sbjct: 245 TGMGFERLVSIVQDKRSNYDTDVFLPIFDKIRELTGVRPYEGRFDADDVDGIDTAYRVVA 304

Query: 352 DHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMG 410
           DHIRTL+FA++DG  P N GR YVLRRILRR  RY  + L  + G FF+ L+ +VV+ MG
Sbjct: 305 DHIRTLTFALSDGGIPNNVGRGYVLRRILRRGARYARKKLGVKIGCFFSSLLPVVVETMG 364

Query: 411 DVFPELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWD 467
            VFPE+ ++   I+EI+  EE SF +TL +G    ++F   A++   K L+G+D + L+D
Sbjct: 365 AVFPEITRKVDDIKEILDEEEESFSRTLDRGEKLFDQFATRAKEQGLKELNGRDVWRLYD 424

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIV-MDADATAALH 526
           T+GFP+DLT+LMAEE GL V+ + F  A   ++E S+ A +KQ G +IV +D   TAAL 
Sbjct: 425 TFGFPVDLTRLMAEELGLGVNDQEFEEAQAWSKEASK-ASSKQVGTSIVKLDVHDTAALE 483

Query: 527 K-RGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIES--VVP-GNEVGIVLASSSFYAEQG 582
           K   +  TDDS KF    + ++++KAI+    F +S  ++P G   GI+L  +SFYAE G
Sbjct: 484 KDTDIPKTDDSAKFN-LGNIRALVKAIFYEKSFPQSTDIMPEGATFGIILDKTSFYAEAG 542

Query: 583 GQIFDEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           GQ +D G   I+G+   F V NVQ Y G+V+H G L    G+ +VG+EVI   D  RR  
Sbjct: 543 GQEYDTGNIVIDGV-ADFEVTNVQSYNGYVLHTGHLK--YGQLAVGKEVISSYDELRRWP 599

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           +  NHT TH+LNF LREVLGDH+DQKGS+V P KLRFDFSH   +    L RIE+   + 
Sbjct: 600 LRNNHTATHILNFCLREVLGDHIDQKGSLVAPTKLRFDFSHKAQISHSELSRIEATSVDW 659

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           IK  + VFSK+  L  A  I GLRAVFGE YPDPVRVV +   V+++  D EN +W   S
Sbjct: 660 IKRNVKVFSKDLELETASKIPGLRAVFGESYPDPVRVVTLEYDVDEIAKDIENPKWRRTS 719

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK 820
            E CGGTH++ T + + F +  E GIAKGIRRI A+T   A+ A   A  L+  ++    
Sbjct: 720 VEFCGGTHVARTGDIKDFIITEESGIAKGIRRIVAITGHEAHSAARHALLLQGRLEQIDS 779

Query: 821 IEG-------------------SLLEKNQ-------VRKAQKKVAEENLQKAVKVATETA 854
           + G                   S+L+K +       +RKA  K  +E      + A +T 
Sbjct: 780 LTGKNKDAALKALSIELGQADISVLKKAELRDRLAVIRKAVDKQVKEREAVVNREAIDTI 839

Query: 855 EAAASNGKPFCISRVEVGLDA-AAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPE 913
           +   ++ +        + +D  A + +AV+    +    V +FS D  +N       VP 
Sbjct: 840 QRHFNDNEKAETYIASLNVDGNAKILQAVISQGRKLQKAVYLFSVDPESNTVAHVNYVPP 899

Query: 914 KSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAM 960
           +  ++K  +   W +  +  L G+ G GK   A G G+D  ++  A+
Sbjct: 900 EF-KTKGADARTWASKVVGILGGKAG-GKEDSAQGVGSDGHRLDEAL 944


>gi|164660846|ref|XP_001731546.1| hypothetical protein MGL_1729 [Malassezia globosa CBS 7966]
 gi|159105446|gb|EDP44332.1| hypothetical protein MGL_1729 [Malassezia globosa CBS 7966]
          Length = 963

 Score =  857 bits (2213), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 474/965 (49%), Positives = 606/965 (62%), Gaps = 57/965 (5%)

Query: 55  VVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNT 114
           V EWPA KVR TF  FF +K H    SS  VP +DPTLLFANAGMNQYK IFLGT DP++
Sbjct: 9   VNEWPAAKVRSTFLDFFREKEHTFVPSSSTVPYDDPTLLFANAGMNQYKSIFLGTVDPSS 68

Query: 115 QLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWEL 174
           + SKL RA N+QKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK EAI +AW+L
Sbjct: 69  EFSKLRRAVNSQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKEEAISFAWKL 128

Query: 175 LTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDT 233
           LT+VY LP+DRLY TYF GD K GL PD E  +IW K  +P  R+L    KDNFWEMG T
Sbjct: 129 LTEVYGLPSDRLYVTYFEGDPKQGLEPDVETLEIWRKVGVPDERILKGNAKDNFWEMGAT 188

Query: 234 GPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTG 293
           GPCGPCSEIH+DR G R+AASLVN DDP  IE+WN VFIQFNRE DGSL+PLPA+H+DTG
Sbjct: 189 GPCGPCSEIHFDRVGGRNAASLVNMDDPDVIEVWNNVFIQFNREEDGSLRPLPARHIDTG 248

Query: 294 LGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADH 353
           +GFERL SILQ+K SNYDTDVFMP+F  IQ+ TGARPYSGK+GA+D D +D AYRVVADH
Sbjct: 249 MGFERLVSILQDKRSNYDTDVFMPLFSRIQELTGARPYSGKLGAEDVDGLDTAYRVVADH 308

Query: 354 IRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDV 412
           IRTL+FAI+DG  P  +GR YVLRRILRR  R+  +  +   G FF+ LV  +V+ MG  
Sbjct: 309 IRTLTFAISDGCIPDKDGRGYVLRRILRRGTRFVRKYFQVPIGAFFSQLVPTLVEQMGSF 368

Query: 413 FPELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTY 469
           FPE+ ++   ++ I+  EE SF +TL +G    E++  AA+      LSG D + L+DTY
Sbjct: 369 FPEITRKTKELQAILNEEEQSFARTLDRGEKLFEQYANAARTEGRTKLSGADVWRLYDTY 428

Query: 470 GFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRG 529
           GFP+DLT +MAEE+GL  D   F  A  E++E S+    +Q   A+ +D      L    
Sbjct: 429 GFPVDLTSIMAEEQGLTFDQAEFEKAQAESKEASKGQGKQQEALAVKLDVHDLGHLDADA 488

Query: 530 -VLATDDSFKF--IWFQDHKSVIKAIYTGSEFIES----VVPGNEVGIVLASSSFYAEQG 582
            V  T+D FK+     Q H   +KAI+   +F+         G   GI+L  ++ YAE G
Sbjct: 489 SVPQTNDVFKYDTPSMQAH---VKAIFQEHKFVSDSNSLAKAGEPFGILLDQTNMYAESG 545

Query: 583 GQIFDEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           GQ  D G   I+G    F V +VQ   G+V+HIG L    G+ SVG++V+   D  RR+ 
Sbjct: 546 GQQADTGSLVIDGK-AEFEVSDVQASNGYVLHIGFLK--YGKLSVGDQVVVSYDESRRRP 602

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           +  NHT TH+LNF LRE+LGDHVDQKGS+V P KLRFDFSH  PV+   L++IE I N  
Sbjct: 603 LQNNHTGTHILNFGLREILGDHVDQKGSLVAPSKLRFDFSHKAPVNVSELQKIEDISNSF 662

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I+ ++ V++K+  L EA  I GLRAVFGE YP+PVRVVA+   ++ +  D  N  W   S
Sbjct: 663 IERDVSVYAKDMVLEEAYKIPGLRAVFGESYPNPVRVVALEFDIDQMAKDLTNPRWRQTS 722

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVT-------TGLAYKAFEAACSLEK 813
            E CGGTH+  T E     +  E GIAKGIRRI AVT       T  A +A +    +++
Sbjct: 723 IEFCGGTHVKKTGEIGRLVVTEESGIAKGIRRIVAVTGDEAVAVTATADEASKRLDEIDQ 782

Query: 814 EVDDASK--------IEGSLLEKNQVRKAQKKVAEENLQKA------------VKVATET 853
             DD +K        +E + ++ + VRK + K     ++KA            VKVA E 
Sbjct: 783 VSDDVAKEAQLKAFSVELARMDISVVRKDELKARFTKIRKALDTRLKARAAADVKVAQEA 842

Query: 854 AEAAASNGKP---FCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAG 910
            +    N  P     I++++ G ++ A++  V  V  +    V +F+ +  + K     G
Sbjct: 843 VQTYF-NENPDARVYIAQLDTGANSKALQSGV-AVARKLNKSVYLFARESGSEKTKTLYG 900

Query: 911 --VPEKSDQSKQLEVSEWLTAALQPLKGR-CGKGKGGLASGQGTDAAQVTPAMDLAAEFA 967
             VP K +  + L+   W  A  + L+GR  GK  G    G+GT  A V  A+ LA  F 
Sbjct: 901 NFVP-KDELERGLDAVSWNKAVSEKLQGRGGGKPDGAQGQGEGT-KADVDEAIKLAQSFF 958

Query: 968 AMKLR 972
            M+L+
Sbjct: 959 DMQLK 963


>gi|268561116|ref|XP_002646367.1| C. briggsae CBR-ARS-2 protein [Caenorhabditis briggsae]
          Length = 967

 Score =  856 bits (2212), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 463/966 (47%), Positives = 608/966 (62%), Gaps = 67/966 (6%)

Query: 60  ATKVRDTFFKFF-EDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSK 118
           A++VR TF +FF E KNH    SS V+P +DPTLLFANAGMNQ+KP+FLG ADPN+ L+K
Sbjct: 6   ASEVRSTFIEFFREKKNHTYVHSSSVIPHDDPTLLFANAGMNQFKPLFLGIADPNSDLAK 65

Query: 119 LTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKV 178
           L RA NTQKCIRAGGKHNDLDDVGKD YHHT+FEMLGNWSFGDYFK E I WAWELLT V
Sbjct: 66  LKRAVNTQKCIRAGGKHNDLDDVGKDVYHHTYFEMLGNWSFGDYFKKEIITWAWELLTTV 125

Query: 179 YRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCG 237
           Y +PA+RLY + FGGDE  G+  D+EAR+IW    +P  R+L FG KDNFWEMGD GPCG
Sbjct: 126 YGIPAERLYVSVFGGDEANGVPADSEAREIWRSVGVPEERILNFGMKDNFWEMGDVGPCG 185

Query: 238 PCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFE 297
           PCSEIHYDR GNRDA+ LVN DDP  +EIWN+VFIQFNRE  G+LK LPAKH+D GLG E
Sbjct: 186 PCSEIHYDRIGNRDASHLVNADDPMVVEIWNLVFIQFNREEGGALKSLPAKHIDCGLGLE 245

Query: 298 RLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTL 357
           RL +++Q+K SNYDTD+F PIF+ I + +G R Y+G +G +D D VDMAYRVVADHIRTL
Sbjct: 246 RLIAVMQDKTSNYDTDIFQPIFEEITKKSGVRAYTGHIGDEDKDGVDMAYRVVADHIRTL 305

Query: 358 SFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELK 417
           + A++DG  P N GR YVLRRILRR VRY +E L AQ GFF  LV +V+ ++GD FPELK
Sbjct: 306 TIALSDGGRPDNSGRGYVLRRILRRGVRYATEKLNAQPGFFAALVPVVISILGDTFPELK 365

Query: 418 QREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG--KVLSGQDAFILWDTYGFPLDL 475
           +    + +II  EE  F KTL +G   F++A   +    K   G  A+ L+DTYGFP DL
Sbjct: 366 RDPVTVMDIINDEEKQFLKTLSRGRVLFQRAVDSLPAGTKTFPGDIAWRLYDTYGFPADL 425

Query: 476 TQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDD 535
           TQLMAEE+GL VD   F +A  +A E S SA   +    + +D  A A L ++G+  TDD
Sbjct: 426 TQLMAEEKGLSVDETAFEDARKKAIETS-SAGAGKFRDTLDLDVHALAELQQKGIPTTDD 484

Query: 536 SFKFIW------------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGG 583
           S K+ +            F+     I AI    +F++ +V G E  ++L  ++FYAEQGG
Sbjct: 485 SPKYAYSFTGEGSEAVYKFEPCVGKILAIRRDGKFVDQLVAGEEGAVLLDRTNFYAEQGG 544

Query: 584 QIFDEGFIEGL---FGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           QI+D G +         F V N Q+ GG+++ +GS     G FSVG+ V  + D DR++L
Sbjct: 545 QIYDVGVLSKSGDESNEFNVSNCQVRGGYIVLVGS---AEGSFSVGDNVNQRFDEDRKQL 601

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           I  NHT TH+LN+ALR+VL D  DQKGS+V P+++RFDF++   + PE +++ E    + 
Sbjct: 602 IMKNHTGTHVLNYALRKVLADS-DQKGSLVAPDRMRFDFTNKAAMTPEQVKQAEEYAQQL 660

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I A+  V++K + L +AK INGLRA+F E YPDPVRVVA+G  VE LL +PE +   + +
Sbjct: 661 INAKGQVYAKNSPLEDAKKINGLRAMFDETYPDPVRVVAVGTPVEQLLQNPEAEAGQNTT 720

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK 820
            E CGGTHL N        + SEE IAKGIRRI A+T   A +A   A  LE  + D SK
Sbjct: 721 VEFCGGTHLQNVSHIGRIVISSEEAIAKGIRRIVALTGPEADRAIARAERLEARLVDESK 780

Query: 821 IEGS---LLEKNQVRKAQKKVAE----------------------ENLQKAVKVATETAE 855
              +   L  K++ ++ QKK+ E                      +++QK +   ++  +
Sbjct: 781 HAKNQEILSNKDKFKELQKKIQEIVDEANGAQLPYWRKDALRKKAKDVQKDMDGYSKAQQ 840

Query: 856 AAASNG--------------KPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDET 901
           AA +                 P  +       ++ A+  A+  + + K   VM FS +E 
Sbjct: 841 AAVAEKVLGEAKELAAAAEQPPVLVHVFASNANSKAIDNALKLLKDTKA--VMAFSVNED 898

Query: 902 TNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMD 961
           T K V+C    +KS  S  L+ +EW+      L G+ G GK   A   G +  ++  A++
Sbjct: 899 TGK-VLCLAKVDKSLVSNGLKANEWVNEVCTILGGKGG-GKEANAQLTGENVDKLDDAVE 956

Query: 962 LAAEFA 967
           LA +FA
Sbjct: 957 LAQKFA 962


>gi|307210107|gb|EFN86804.1| Alanyl-tRNA synthetase, cytoplasmic [Harpegnathos saltator]
          Length = 972

 Score =  856 bits (2212), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 457/968 (47%), Positives = 602/968 (62%), Gaps = 67/968 (6%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  +  FF++K H    SS  +P +DPTLLF NAGMNQ+KPIFLGT DPN+ ++K  R
Sbjct: 9   QIRQAYIDFFKNKGHEYVHSSSTIPHDDPTLLFTNAGMNQFKPIFLGTVDPNSDMAKWVR 68

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
             N+QKCIRAGGKHNDLDDVGKD YHHTFFEM+GNWSFGDYFK E   WAWE LT+  +L
Sbjct: 69  VVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMMGNWSFGDYFKKEICSWAWEFLTETLKL 128

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGPCS 240
           PADRLY TYFGGDEK GLAPDNE +++WL   +PAS VLP   KDNFWEMG+TGPCGPCS
Sbjct: 129 PADRLYVTYFGGDEKNGLAPDNECKELWLSLGIPASHVLPGNMKDNFWEMGETGPCGPCS 188

Query: 241 EIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLT 300
           E+HYDR G R+AA LVN DDP  +EIWN+VFIQ+NRE+DG+LKPLP KH+D GLG ERL 
Sbjct: 189 ELHYDRIGGREAAHLVNMDDPDVLEIWNLVFIQYNREADGNLKPLPKKHIDCGLGLERLV 248

Query: 301 SILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFA 360
           S++QNK +NYDTD+FMP+F AI++ TGA PY GK+G DD ++VDMAYRV+ADH RT++ A
Sbjct: 249 SVIQNKRANYDTDLFMPLFAAIEKGTGAPPYQGKIGTDDVNRVDMAYRVLADHARTITIA 308

Query: 361 IADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQRE 420
           +ADG  P N GR YVLRRILRRAVRY +E L A+ GFF  LVN+VV+++G+VFPE+ +  
Sbjct: 309 LADGGIPDNTGRGYVLRRILRRAVRYATEKLNAKPGFFGSLVNVVVELLGEVFPEVTKDP 368

Query: 421 AHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK-VLSGQDAFILWDTYGFPLDLTQLM 479
             I +I+  EE  F KTL +G     +    ++    + G  A+ L+DTYGFP+DLTQLM
Sbjct: 369 QSIIDIVNEEETQFLKTLSRGRNLLNRTIAKLESNDTVPGDVAWRLYDTYGFPIDLTQLM 428

Query: 480 AEERGLLVDIEGFNNAMDEARERSRSAQNKQAG--GAIVMDADATAALHKRGVLATDDSF 537
            EE+GL +D+ G+  +  +A+  S   QNK  G    I +D  +   L +RG+  TDDS 
Sbjct: 429 TEEKGLKIDMAGYEESKKQAQLIS---QNKVGGVDDQINLDVHSITELQERGIKPTDDSP 485

Query: 538 KFIW------------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
           K+ +            F      +  +     F++ V  G EVGI+L  ++FYAEQGGQI
Sbjct: 486 KYNYKITSTTTYKEYEFAPCIGTVIELRRAKTFVDQVSSGEEVGILLDRTNFYAEQGGQI 545

Query: 586 FDEGF---IEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIA 642
           +DEGF   ++       ++NVQ+  G+V+HIG++  G G    G++V   VD  RR+L+ 
Sbjct: 546 YDEGFLVKVDDEATEIRIKNVQVRAGYVLHIGTV--GEGILKKGDQVHANVDTTRRRLVM 603

Query: 643 PNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIK 702
            NH+ TH LN ALR+VLG   DQKGS+V P++LRFDF++  P+  E ++  E+I N+ IK
Sbjct: 604 ANHSATHALNHALRKVLGTEADQKGSLVAPDRLRFDFTNKGPMTTEQVKNAENITNDMIK 663

Query: 703 AELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAE 762
               +++KE+ LA AK I GLRA+F E YPDPVRVV++G  +E+L  +P +      S E
Sbjct: 664 DNKKIYAKESNLALAKTIQGLRAMFEETYPDPVRVVSMGVPIEELEKNPLSPVATQTSVE 723

Query: 763 LCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAF-EAACSLEKEVDDASKI 821
            CGGTHL  T     F + SEE IAKGIRRI A+T   A KA  +A     +     + I
Sbjct: 724 FCGGTHLHYTGHIGDFIIASEEAIAKGIRRIVALTGPEAAKALKKATLLQNQLTQLQTTI 783

Query: 822 EGSLLEKNQVRKAQKKVAE--ENLQKAV-----------------------------KVA 850
           E      N  ++  KK+ E  E++  AV                              +A
Sbjct: 784 EADKCGANS-KEYVKKIVELTEDISHAVIPGWRKDEMRGMLKKLKKSLDDKDRAAKAAIA 842

Query: 851 TETAEAAAS--NGKPFCISRVEVGLDAAAVREAV---LKVIE--QKGMPVMVFSTDETTN 903
               E A S    K  C   VEV L+A +  +A+   LK I         ++ S D+   
Sbjct: 843 NMVVETAQSIIQSKVGCQVLVEV-LEAYSNTKALDSALKKIRAVSPETSALLISVDQDVK 901

Query: 904 KAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLA 963
           K    + VP KS  SK L+ +EW+ A    ++G+ G GK   A   G D   +   +  A
Sbjct: 902 KIFALSSVP-KSAVSKGLKANEWIQAIAPMMQGK-GGGKSESAQASGADITCLNEIVSKA 959

Query: 964 AEFAAMKL 971
            EFA  KL
Sbjct: 960 NEFANQKL 967


>gi|157115817|ref|XP_001658296.1| alanyl-tRNA synthetase [Aedes aegypti]
 gi|108883466|gb|EAT47691.1| AAEL001218-PA [Aedes aegypti]
          Length = 966

 Score =  856 bits (2211), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 448/964 (46%), Positives = 606/964 (62%), Gaps = 57/964 (5%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R+ F  FF++K H+   SS  +P++DPTLLFANAGMNQ+KPIFLGTADPN+ ++K 
Sbjct: 7   AKQIRNAFLDFFKEKEHLYVHSSSTIPLDDPTLLFANAGMNQFKPIFLGTADPNSDMAKW 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFGDYFK E   WAWELLT   
Sbjct: 67  VRTANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKEICTWAWELLTDRL 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
           +LP DRLY TYFGG  ++GL PD E R+IW+K  +    +LP   KDNFWEMG+TGPCGP
Sbjct: 127 KLPKDRLYVTYFGGHPESGLEPDLECREIWIKLGVKEEHILPGSMKDNFWEMGETGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSE+H+DR G R    LVN DDP  +EIWN+VFIQFNRE DGSLK LP KH+D G+GFER
Sbjct: 187 CSELHFDRIGGRSVPELVNMDDPDVLEIWNLVFIQFNREQDGSLKLLPKKHIDCGMGFER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S++Q+K SNYDTDVF+P+F+AIQ+ TGA  Y G+VGADD D VDMAYRV+ADH RT++
Sbjct: 247 LVSVIQDKRSNYDTDVFVPLFEAIQKGTGAPSYQGRVGADDVDGVDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY +E L A+ GFF  LV+ VV ++GD FPE+K+
Sbjct: 307 IALADGGFPDNTGRGYVLRRILRRAVRYATEKLNAKPGFFATLVDTVVFLLGDTFPEVKK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKA-AQDVQGKVLSGQDAFILWDTYGFPLDLTQ 477
              +I+ II  EE  F KTL +G     +  A+    KV+ G  A+ L+DTYGFP+DLTQ
Sbjct: 367 DPQNIKNIINEEEQQFLKTLTRGRNLLNRTIAKLGDSKVIPGDVAWRLYDTYGFPIDLTQ 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSF 537
           LMAEE+ + +D+EG+  A  E+   S+  +  +A   + +D  A + L ++ V  TDDSF
Sbjct: 427 LMAEEKNMTIDMEGYEKAKHESYILSQGKEKSKA-ATVDLDVHAISELQEKKVPTTDDSF 485

Query: 538 KFIW-----------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           K+ +           F+     + A+   + F++ V  G E  ++L  ++FYAE GGQI+
Sbjct: 486 KYRYKADVDPMAEYKFEPCNGKVLALRANNIFVDEVQAGQECAVILDKTNFYAESGGQIY 545

Query: 587 DEGFIEGL---FGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAP 643
           D+G++  +      F V  V   GG++IHIG + EG  R  VG+EV C +D  RR+L   
Sbjct: 546 DQGYLVKVGDESTEFNVNLVYNRGGYIIHIG-VVEGILR--VGDEVACHMDTLRRQLTMK 602

Query: 644 NHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKA 703
           NH+ TH LN +L +VLG   DQ+GS+V+PEKLRFDF++   +  E +   E +  E +K 
Sbjct: 603 NHSATHALNHSLLKVLGLDTDQRGSLVVPEKLRFDFTNKSAMTVEQVAESERLTREVVKK 662

Query: 704 ELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAEL 763
            + +++KE+ L+ AK I GLR+VF EVYPDPVRV++ G  VE+L A+PE +E +  S E 
Sbjct: 663 NMQIYAKESKLSVAKSIKGLRSVFDEVYPDPVRVISFGVPVENLEANPEGEEGVETSVEF 722

Query: 764 CGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVD------- 816
           CGGTHL  +     F + +EE IAKGIRRI A+T   A KA +    LE E++       
Sbjct: 723 CGGTHLHQSGHMWDFVITTEEAIAKGIRRIVALTGPEALKALKKTELLENELNALKSTIE 782

Query: 817 ------DASKIEGSLLEKNQ---------VRKAQKKVAEENLQKAVKVATETAEAAASN- 860
                 D+ ++   ++E N+         V+K + +   ++L+K +      A AA S  
Sbjct: 783 ADKTGKDSKELVKKIVELNEDVSQAVIPYVKKDEIRNVLKSLKKTLDDKERAARAAVSTT 842

Query: 861 -------------GKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVV 907
                          PF + R+E   +  A+  A+ +V +       +F + +   K + 
Sbjct: 843 VVEKAKELSESNKDAPFLVHRMEAYNNTKALDSALKEVRKINPEQSALFVSSDPDTKKIF 902

Query: 908 CAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFA 967
           C     KS   K L+ +EW++  + P  G  G GK   A   G +  +V   ++LA +FA
Sbjct: 903 CLASVPKSAVEKGLKANEWIS-HISPSMGGKGGGKPESAQASGANFDKVEEILELARQFA 961

Query: 968 AMKL 971
           A KL
Sbjct: 962 ASKL 965


>gi|296231556|ref|XP_002761188.1| PREDICTED: alanine--tRNA ligase, cytoplasmic [Callithrix jacchus]
          Length = 968

 Score =  856 bits (2211), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 465/966 (48%), Positives = 618/966 (63%), Gaps = 63/966 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A+++R  F +FF+   H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  ++KL
Sbjct: 7   ASEIRQRFIEFFKRNEHTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A + A ELLT+ +
Sbjct: 67  SRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +P +RLY TYFGGDE AGL PD E + IW    L  +++LP   KDNFWEMGDTGPCGP
Sbjct: 127 GIPIERLYVTYFGGDEAAGLEPDLECKQIWQNLGLEDTKILPGNMKDNFWEMGDTGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G RDAA LVN DDP  +EIWN+VFIQ+NRE+DG LKPLP K +DTG+G ER
Sbjct: 187 CSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNRETDGILKPLPKKSIDTGMGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+F+P F+AIQ+ TGARPY+GKVGA+DAD +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY  E L A  GFF  LV++VV+ +GD FPELK+
Sbjct: 307 VALADGGRPDNTGRGYVLRRILRRAVRYAHEKLNASRGFFATLVDVVVQSLGDAFPELKK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
               +++II  EE  F KTL +G     +    +   K + G  A++L+DTYGFP+DLT 
Sbjct: 367 DPDMVKDIINEEEVQFLKTLSRGRRILDRKILSLGDSKTIPGDTAWLLYDTYGFPVDLTG 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
           L+AEE+GLLVD++GF      A+ +S   Q K AGG   I++D  A   L  +G+  TDD
Sbjct: 427 LIAEEKGLLVDMDGFEEERKLAQLKS---QGKGAGGEDLIMLDIYAIEELRAQGLEVTDD 483

Query: 536 SFKFIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           S K+ +         F++  + + A+     F+E V  G E G+VL  + FYAEQGGQI+
Sbjct: 484 SPKYNYHSDSSGNYVFENTVATVLALRREKMFVEEVSTGQECGVVLDKTCFYAEQGGQIY 543

Query: 587 DEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           DEG++  +  S      F V+N Q+ GG+V+HIG++    G   VG++V   +D  RR+ 
Sbjct: 544 DEGYLVKVDDSNEDKTEFTVKNAQVRGGYVLHIGTIY---GDLKVGDQVRLFIDEPRRRP 600

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           +  NHT TH+LNFALR VLG+  DQKGS+V P++LRFDF+    +  + +++ E I NE 
Sbjct: 601 VMSNHTATHILNFALRSVLGE-ADQKGSLVAPDRLRFDFTAKGAMSTQQIKKAEEIANEM 659

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I+A   V++++  LA AK I GLRAVF E YPDPVRVV++G  V +LL DP        S
Sbjct: 660 IEAAKPVYTQDCPLAAAKAIQGLRAVFDETYPDPVRVVSVGVPVSELLDDPSGPAGSLTS 719

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSL--------- 811
            E CGGTHL N+  A AF +++EE IAKGIRRI AVT   A KA   A SL         
Sbjct: 720 VEFCGGTHLQNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKAESLKTSLSLMEA 779

Query: 812 ------------EKEVDDASKIEGSLL----EKNQVRKAQKKVAE--ENLQKAVK----- 848
                       ++E+ D  ++  + +    +K+++R+  K + +  ++L +A K     
Sbjct: 780 KVKAQTAPNKDVQREIADLGEVLATAVIPQWQKDELRETLKSLKKVMDDLDRASKADVQK 839

Query: 849 -VATETAEAAASN-GKPFCISRVEVGLDAAAVREAV-LKVIEQKGMPVMVFSTDETTNKA 905
            V  +T +   SN  +P  I  +E G  A A+ EA+ L  +       M+F+ D    K 
Sbjct: 840 RVLEKTKQLIDSNPNQPLVILEMESGASAKALNEALKLFKMHSPQTSAMLFTVDNEAGKI 899

Query: 906 VVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAE 965
                VP+ +  ++ L+ SEW+      + G+ G GK   A   G +   +  A+ LA  
Sbjct: 900 TCLCQVPQNA-ANRGLKASEWVQQVSGLMDGK-GGGKDVSAQATGKNVGCLQEALQLATS 957

Query: 966 FAAMKL 971
           FA + L
Sbjct: 958 FAQLHL 963


>gi|115432192|gb|ABI97370.1| AlaRS [Bos taurus]
          Length = 869

 Score =  855 bits (2208), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 426/776 (54%), Positives = 541/776 (69%), Gaps = 28/776 (3%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R  F  FF+   H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  ++KL
Sbjct: 7   AGEIRQRFIDFFKRNEHTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A + A ELLT+ +
Sbjct: 67  SRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +P +RLY TYFGGDE AGL PD E + IW    L  SR+LP   KDNFWEMGDTGPCGP
Sbjct: 127 GIPVERLYVTYFGGDEAAGLEPDLECKQIWQNLGLDDSRILPGNMKDNFWEMGDTGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G RDAA LVN DDP  +EIWN+VFIQ+NRE+DG LKPLP K +DTG+G ER
Sbjct: 187 CSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNRETDGILKPLPKKSIDTGMGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+F+P F+AIQ+ TGARPY+G+VGA+DAD +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGRVGAEDADGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY  E L A  GFF  LV++VV+ +GD FPELK+
Sbjct: 307 VALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRGFFATLVDVVVQSLGDAFPELKK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
               +++II  EE  F KTL +G     +  Q +   K + G  A++L+DTYGFP+DLT 
Sbjct: 367 DPDMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTA 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSR-SAQNKQAGGA--IVMDADATAALHKRGVLATD 534
           L+AEE+GL+VD++GF    DE R+ ++  +Q K AGG   I++D  A   L ++G+ ATD
Sbjct: 427 LIAEEKGLVVDMDGF----DEERKLAQLKSQGKGAGGEDLIMLDIYAIEELREKGLEATD 482

Query: 535 DSFKFIWFQDHK---------SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
           DS K+ +  D           + + A+     F+E    G E G+VL  + FYAEQGGQ 
Sbjct: 483 DSPKYSYHSDSSGTYVFESAVATVMALRRDRMFVEEASTGQECGVVLDKTCFYAEQGGQT 542

Query: 586 FDEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRK 639
           +DEG++  +  S      F V+N Q+ GG+V+HIG+L    G   VG++V   +D  RR+
Sbjct: 543 YDEGYLVKVDDSSEDKTEFTVKNTQVRGGYVLHIGTLY---GSLKVGDQVRLFIDEPRRR 599

Query: 640 LIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNE 699
            +  NHT TH+LNFALR VLG+  DQ+GS+V P++LRFDF+    +  + +++ E I NE
Sbjct: 600 PVMSNHTATHILNFALRSVLGE-ADQRGSLVAPDRLRFDFTAKGAMSTQQIKKAEEIANE 658

Query: 700 QIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSI 759
            I+A   V++++ +LA AK I GLRAVF E YPDPVRVV+IG  V +LL DP        
Sbjct: 659 MIEAAKPVYTEDCSLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLT 718

Query: 760 SAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV 815
           S E CGGTHL N+  A AF ++SEE IAKGIRRI AVT   A KA   A SL+K +
Sbjct: 719 SVEFCGGTHLQNSSHAGAFVIVSEEAIAKGIRRIVAVTGAEAQKALRKAESLKKSL 774


>gi|407929570|gb|EKG22385.1| Alanyl-tRNA synthetase class IIc [Macrophomina phaseolina MS6]
          Length = 963

 Score =  854 bits (2207), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 468/957 (48%), Positives = 614/957 (64%), Gaps = 51/957 (5%)

Query: 54  QVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPN 113
           Q  EW A +VRDTF  +F+   H    SS VVP++DPTLLF NAGMNQYK IFLGT DPN
Sbjct: 8   QQTEWSAQRVRDTFLDYFKKNGHTFVPSSSVVPLSDPTLLFTNAGMNQYKSIFLGTVDPN 67

Query: 114 TQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWE 173
           +  + L RA N+QKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK EAIE++WE
Sbjct: 68  SDFATLKRAVNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIEYSWE 127

Query: 174 LLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGD 232
           LLTKVY L  DRLY TYF GD+  GL  D EAR+ W    +    +L    KDNFWEMGD
Sbjct: 128 LLTKVYGLDPDRLYVTYFEGDQSLGLEADEEARNYWKAVGVAEDHILKGNAKDNFWEMGD 187

Query: 233 TGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDT 292
            GPCGPCSE+HYDR G R+AA LVN DDP  +EIWN VFIQ+NRE D SL+ LP KHVDT
Sbjct: 188 QGPCGPCSEVHYDRIGGRNAAHLVNQDDPNVLEIWNNVFIQYNREPDRSLRSLPNKHVDT 247

Query: 293 GLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVAD 352
           G+G+ERL S+LQNKMSNYDTDVF P+F  IQ+ TG R Y GK G +DAD +D AYRVVAD
Sbjct: 248 GMGYERLVSVLQNKMSNYDTDVFTPLFKRIQEITGVREYRGKFGEEDADGIDTAYRVVAD 307

Query: 353 HIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGD 411
           H+R L+FAI+DG+ P   GR YV+RR+LRR  RY  + L+   G FF+ +V  +V+ +GD
Sbjct: 308 HVRLLTFAISDGAIPDAVGRGYVVRRVLRRGARYARKYLQTDIGSFFSKIVPTLVEQVGD 367

Query: 412 VFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG---KVLSGQDAFILWDT 468
           +FPE+K+RE  ++EI+  EE +F K+L +G   F + A+ V+    K + G+D + L+DT
Sbjct: 368 MFPEIKKREQDVKEILDEEEQAFAKSLDRGEVMFDRYAKQVEASGSKKIPGKDVWRLYDT 427

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIV-MDADATAALHK 527
           YGFP DLT +MAEERGL +D      A   ARE S+ A  K+AG  IV +D  A   L  
Sbjct: 428 YGFPEDLTLIMAEERGLTIDDAEVREAQAIAREASKGA--KKAGSNIVKLDVHALGQLQD 485

Query: 528 RGVLATDDSFKFIWFQDHKSVIKAIY-TGSEFIES---VVPGNEVGIVLASSSFYAEQGG 583
             V  TDDSFKF   ++  + +KAIY    +FI+S   +  G ++G+VL  ++FYAEQGG
Sbjct: 486 MKVPTTDDSFKFAK-ENITAKVKAIYHPEKKFIKSTSEIGEGEQIGVVLDKTNFYAEQGG 544

Query: 584 QIFDEG--FIEGLF-GSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           Q +D G   IEG    +F V+NVQ+  GFV+H G L+ GA   SV +EVIC+ D  RR  
Sbjct: 545 QEYDTGKILIEGANEAAFDVQNVQVSNGFVLHTGYLSYGA--LSVEDEVICEYDELRRNP 602

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           I  NHT TH+LN+ALREVLG  ++QKGS+V PEKLRFDFSH + +    +++IE+I N  
Sbjct: 603 IRNNHTGTHVLNYALREVLGGDIEQKGSLVAPEKLRFDFSHKQGITEAEIQKIETISNGY 662

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I+    V+ +   +AEA  I G+RAVFGE YPDPVRVV+IG  V +LL DPEN+ W  +S
Sbjct: 663 IRDNRTVYIEPVAVAEAHKIRGVRAVFGEKYPDPVRVVSIGVPVSELLKDPENEAWAKLS 722

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVD---- 816
            E CGGTH+++T E +   ++ E GIAKGIRRI AVT   AY     A    KE++    
Sbjct: 723 IEFCGGTHVASTGEIKELVVVEESGIAKGIRRIIAVTGQGAYDVQRVAADFSKELERLEK 782

Query: 817 ----------------DASKIEGSLLEKNQVRK----AQKKVAEENLQKAVKVATETAEA 856
                           + +++  SLL+K ++RK      K V  E  +++  V+T+  E 
Sbjct: 783 MAFGPEKEALAKRIQNELNELSVSLLDKAKMRKRFEAVSKSVLAEQKKQSKAVSTKVQET 842

Query: 857 -----AASNGKPFCISRVEVGLDAA-AVREAVLKV-IEQKGMPVMVFSTDETTNKAVVCA 909
                AA+    F + +++     + A+ EA+  V  +QK   V + + D    K     
Sbjct: 843 VTNYFAANKDAKFLVQKLDYNAHTSKAITEALKHVSTKQKDKTVYLIAGDAQEGKVAHGC 902

Query: 910 GVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEF 966
            + +   +++     +W + A+  L G    GKG  A GQGT+  ++  A+D A ++
Sbjct: 903 YMGDHF-ETQGASAGDW-SKAVSELVGGKAGGKGKTAIGQGTNPDKLDQALDQATKY 957


>gi|194386694|dbj|BAG61157.1| unnamed protein product [Homo sapiens]
          Length = 992

 Score =  854 bits (2207), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 465/990 (46%), Positives = 614/990 (62%), Gaps = 87/990 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A+++R  F  FF+   H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  ++KL
Sbjct: 7   ASEIRQRFIDFFKRNEHTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A + A ELLT+ +
Sbjct: 67  SRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF---------LPASRVLPFGCKDNFWEM 230
            +P +RLY TYFGGDE AGL  D E + IW            L  +++LP   KDNFWEM
Sbjct: 127 GIPIERLYVTYFGGDEAAGLEADLECKQIWQNLGTYLYSFVRLDDTKILPGNMKDNFWEM 186

Query: 231 GDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHV 290
           GDTGPCGPCSEIHYDR G RDAA LVN DDP  +EIWN+VFIQ+NRE+DG LKPLP K +
Sbjct: 187 GDTGPCGPCSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNREADGILKPLPKKSI 246

Query: 291 DTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVV 350
           DTG+G ERL S+LQNKMSNYDTD+F+P F+AIQ+ TGARPY+GKVGA+DAD +DMAYRV+
Sbjct: 247 DTGMGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVL 306

Query: 351 ADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMG 410
           ADH RT++ A+ADG  P N GR YVLRRILRRAVR   E L A  GFF  LV++VV+ +G
Sbjct: 307 ADHARTITVALADGGRPDNTGRGYVLRRILRRAVRCAHEKLNASRGFFATLVDVVVQSLG 366

Query: 411 DVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTY 469
           D FPELK+    +++II  EE  F KTL +G     +  Q +   K + G  A++L+DTY
Sbjct: 367 DAFPELKKDPDMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDSKTIPGDTAWLLYDTY 426

Query: 470 GFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHK 527
           GFP+DLT L+AEE+GL+VD++GF      A+ +S   Q K AGG   I++D  A   L  
Sbjct: 427 GFPVDLTGLIAEEKGLVVDMDGFEEERKLAQLKS---QGKGAGGEDLIMLDIYAIEELRA 483

Query: 528 RGVLATDDSFKFIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFY 578
           RG+  TDDS K+ +         F++  + + A+     F+E V  G E G+VL  + FY
Sbjct: 484 RGLEVTDDSPKYNYHLDSSGSYVFENTVATVMALRREKMFVEEVSTGQECGVVLDKTCFY 543

Query: 579 AEQGGQIFDEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICK 632
           AEQGGQI+DEG++  +  S      F V+N Q+ GG+V+HIG++    G   VG++V   
Sbjct: 544 AEQGGQIYDEGYLVKVDDSSEDKTEFTVKNAQVRGGYVLHIGTIY---GDLKVGDQVWLF 600

Query: 633 VDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRR 692
           +D  RR+ I  NHT TH+LNFALR VLG+  DQKGS+V P++LRFDF+    +  + +++
Sbjct: 601 IDEPRRRPIMSNHTATHILNFALRSVLGE-ADQKGSLVAPDRLRFDFTAKGAMSTQQIKK 659

Query: 693 IESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPE 752
            E I NE I+A   V++++  LA AK I GLRAVF E YPDPVRVV+IG  V +LL DP 
Sbjct: 660 AEEIANEMIEAAKAVYTQDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPS 719

Query: 753 NKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLE 812
                  S E CGGTHL N+  A AF +++EE IAKGIRRI AVT   A K    A SL+
Sbjct: 720 GPAGSLTSVEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKTLRKAESLK 779

Query: 813 K---------------------EVDDASKIEGSLL----EKNQVRKAQKKVAE--ENLQK 845
           K                     E+ D  +   + +    +K+++R+  K + +  ++L +
Sbjct: 780 KCLSVMEAKVKAQTAPNKDVQREIADLGEALATAVIPQWQKDELRETLKSLKKVMDDLDR 839

Query: 846 AVK------VATETAEAAASN-GKPFCISRVEVGLDAAAVR---------------EAVL 883
           A K      V  +T +   SN  +P  I  +E G  A A +                  L
Sbjct: 840 ASKADVQKRVLEKTKQFIDSNPNQPLVILEMESGASAKATQGPGSPPLGLISSLALNEAL 899

Query: 884 KVIEQKG--MPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKG 941
           K+ +        M+F+ D    K      VP+ +  ++ L+ SEW+      + G+ G G
Sbjct: 900 KLFKMHSPQTSAMLFTVDNEAGKITCLCQVPQNA-ANRGLKASEWVQQVSGLMDGK-GGG 957

Query: 942 KGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           K   A   G +   +  A+ LA  FA ++L
Sbjct: 958 KDVSAQATGKNVGCLQEALQLATSFAQLRL 987


>gi|119195813|ref|XP_001248510.1| alanyl-tRNA synthetase, cytoplasmic [Coccidioides immitis RS]
 gi|392862286|gb|EAS37081.2| alanyl-tRNA synthetase [Coccidioides immitis RS]
          Length = 1023

 Score =  854 bits (2207), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 464/954 (48%), Positives = 604/954 (63%), Gaps = 51/954 (5%)

Query: 56   VEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQ 115
            VEWPA KVRDTF  FF+   H    SS VVP++DPTLLFANAGMNQYK IFLGT DPN+ 
Sbjct: 72   VEWPAIKVRDTFLDFFKKNGHTFVPSSSVVPLSDPTLLFANAGMNQYKSIFLGTVDPNSD 131

Query: 116  LSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELL 175
             ++L RA N+QKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK EAIE++WELL
Sbjct: 132  FAQLKRAHNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIEYSWELL 191

Query: 176  TKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTG 234
            TKVY L  DRLY TYF G++ AG+ PD E +D+WL   +    +L    KDNFWEMGD G
Sbjct: 192  TKVYGLEPDRLYVTYFEGNKDAGIEPDLETKDLWLSVGVKEDHILSGNMKDNFWEMGDQG 251

Query: 235  PCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
            PCGPCSE+HYDR G R+AA LVN DDP  +EIWN VFIQ+NRES+  L+PLP KHVDTG+
Sbjct: 252  PCGPCSEVHYDRIGGRNAAHLVNMDDPNVLEIWNNVFIQYNRESESILRPLPNKHVDTGM 311

Query: 295  GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
            G+ERL S+LQ K SNYDTDVF P+FDAI++ TG RPYSGK G +D D +D AYRVVADH+
Sbjct: 312  GYERLVSVLQKKYSNYDTDVFTPLFDAIREITGVRPYSGKFGEEDVDGIDTAYRVVADHV 371

Query: 355  RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVF 413
            RTL+FAI+DG+ P NEGR YV+RR+LRR  RY  + LK + G FF+ +V  +V  MG +F
Sbjct: 372  RTLTFAISDGAPPNNEGRGYVVRRVLRRGARYARKYLKVEIGNFFSKIVPTLVDQMGGMF 431

Query: 414  PELKQREAHIREIIAAEEASFGKTLLKGIEKFK---KAAQDVQGKVLSGQDAFILWDTYG 470
            PE+K+++  + EI+  EE SF KTL +G  +F+   + A+D     L G D + L+DT+G
Sbjct: 432  PEIKKKQTDVMEILDEEEISFAKTLDRGERQFEIYAQQAKDSGSNKLHGADVWRLYDTFG 491

Query: 471  FPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGV 530
            FP+DLTQLMAEERGL +D   F  A  +A+E S+  Q K A   + +     + L K  V
Sbjct: 492  FPVDLTQLMAEERGLSIDNVEFEEARLKAKEASK-GQAKAASDLLKLSVHDLSKLEKDKV 550

Query: 531  LATDDSFKFIWFQDHKSVIKAIYTGSEFIESV--VP-GNEVGIVLASSSFYAEQGGQIFD 587
              T+D  KF    +  S I AIY   EF++S   +P G+++GI+L  ++FYAEQGGQ +D
Sbjct: 551  PKTNDDAKF-GRGNILSQIVAIYHDKEFVDSTSGIPEGDQIGIILDKTNFYAEQGGQEYD 609

Query: 588  EG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
             G   I+G      VRNVQ+YGG+V H G +    G  SVG+ VI + D  RR  I  NH
Sbjct: 610  TGKIIIDGK-AELDVRNVQMYGGYVFHTGFIK--YGDLSVGDSVISEYDELRRWPIRNNH 666

Query: 646  TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
            T TH+LNFALREVLG+ +DQKGS+V  EKLRFDFSH   V    L +IE    E I+   
Sbjct: 667  TGTHILNFALREVLGNGIDQKGSLVAAEKLRFDFSHKSGVSDSDLEKIEEKCTEYIRQNC 726

Query: 706  DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
             V+SK+  L+ A+ I G+RAVFGE YPDPVRVV++G ++E++L D ++  W  +S E CG
Sbjct: 727  AVYSKDVPLSVAREITGVRAVFGETYPDPVRVVSVGVELEEILKDVKDPRWKGVSIEFCG 786

Query: 766  GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLA----------------YKAFEAAC 809
            GTH+  T + +   +L E GIAKGIRRI AVT   A                ++  E   
Sbjct: 787  GTHVQKTGDIKDLVILEEGGIAKGIRRIIAVTGEDAHEVQRIAKEFGDRLNRFEKMEIGP 846

Query: 810  SLEKEVD----DASKIEGSLLEK-----------NQVRKAQKKVAEENLQKAVKVATETA 854
              E+E      D +++  S +EK            QV +AQK + ++ ++ A+       
Sbjct: 847  KKEQEAKLIQADLNQLSISAVEKARFREQFARIHKQVLEAQKALQKQEIKAALDAINSHF 906

Query: 855  EAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQ-KGMPVMVFSTDETTNKAVVCAGVPE 913
            E   +      I R+    +A A+ E++     + K   + VF+ D    +  V  G   
Sbjct: 907  EKPENKDSSHLIVRLPTSANAKAISESINHAKSKLKDKSIYVFAADAEQGR--VAHGCYV 964

Query: 914  KSDQSKQ-LEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEF 966
             S  S Q    S W       + G+ G GK   + G GT+  +V  A++ A ++
Sbjct: 965  SSSLSAQGASASNWSGVVSGIVGGKAG-GKAPTSIGNGTEVDRVDEAIEAATKY 1017


>gi|449546469|gb|EMD37438.1| hypothetical protein CERSUDRAFT_83193 [Ceriporiopsis subvermispora
           B]
          Length = 956

 Score =  854 bits (2206), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 473/962 (49%), Positives = 610/962 (63%), Gaps = 50/962 (5%)

Query: 51  ADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTA 110
           A P    W + +VR+ FFK+F+ K H    SS  +P  DPTLLFANAGMNQYK IFLGT 
Sbjct: 2   ATPATQPWSSRQVREEFFKYFQSKEHTFVPSSSTIPYEDPTLLFANAGMNQYKSIFLGTV 61

Query: 111 DPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEW 170
           DP + L++L RA N+QKCIRAGGKHNDL+DVGKD+YHHTFFEMLGNWSFGDYFK EAI +
Sbjct: 62  DPQSDLARLKRAYNSQKCIRAGGKHNDLEDVGKDSYHHTFFEMLGNWSFGDYFKKEAIAY 121

Query: 171 AWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWL-KFLPASRVLPFGCKDNFWE 229
           +WELLT VY+LP ++LY TYF GD   GL PD EA+  WL + +P   VLP   KDNFWE
Sbjct: 122 SWELLTVVYKLPKEQLYVTYFEGDPANGLEPDLEAKQYWLDQGVPEDHVLPGNAKDNFWE 181

Query: 230 MGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKH 289
           MG TGPCGPCSE+H+DR G R+AA LVN+DDP  +EIWN VFIQFNRE DGSL+ LP+KH
Sbjct: 182 MGATGPCGPCSEVHFDRIGGRNAAHLVNHDDPDVLEIWNNVFIQFNREDDGSLRLLPSKH 241

Query: 290 VDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRV 349
           VDTG+GFERL S++Q K SNYDTDVF PIF  IQ+ TG RPY GK G +D + +D AYRV
Sbjct: 242 VDTGMGFERLVSVVQGKRSNYDTDVFSPIFSKIQELTGVRPYQGKFGDEDENGIDTAYRV 301

Query: 350 VADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKV 408
           VADH+RTL+FA++DG  P N GR YVLRRILRR  RY  + L    G FF+ L+ +VV+ 
Sbjct: 302 VADHVRTLTFALSDGGVPNNVGRGYVLRRILRRGCRYARKKLGVNIGSFFSSLLPVVVEQ 361

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV--QG-KVLSGQDAFIL 465
           MGDVFPE+ ++ A I+EI+  EE SF +TL +G + F++ A     QG K LSG+D + L
Sbjct: 362 MGDVFPEITKKMAEIKEILDEEEESFSRTLDRGEKLFEQYANRTLQQGSKQLSGKDVWRL 421

Query: 466 WDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAAL 525
           +DTYGFP+DLT+LMAEE GL+VD E F  A   ++E S+++  K A   + +D    AAL
Sbjct: 422 YDTYGFPVDLTRLMAEELGLVVDEEEFEAAQAHSKEASKASLKKGAKDVVALDVHDIAAL 481

Query: 526 HKR-GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIE--SVVPGNEV-GIVLASSSFYAEQ 581
            K   V  TDDS KF     +  V+ AIY    F +  S +P + V G++L  +SFYAE 
Sbjct: 482 EKNTNVPKTDDSAKFALGNINAKVV-AIYHNKTFPDATSSIPEDAVFGLLLDRTSFYAES 540

Query: 582 GGQIFDEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRK 639
           GGQ +D G   I+G+   F V NVQ+  G+V+HIGS+  G+   SVG+EV+   D  RR 
Sbjct: 541 GGQEYDTGSIVIDGV-AEFEVTNVQVSNGYVLHIGSMKYGS--LSVGDEVVSSYDELRRW 597

Query: 640 LIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNE 699
            +  NHT TH+LN+ LRE LGDH+DQKGS+V P KLRFDFSH   +    L +IE +  E
Sbjct: 598 PLRNNHTATHILNYCLRETLGDHIDQKGSLVAPTKLRFDFSHKAGISAPDLAKIEGMSRE 657

Query: 700 QIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSI 759
            I+  + V+SKE  L  A+ + GLRAVFGE YPDPVRVVA+   + D+L D  N +W S 
Sbjct: 658 WIRKNVKVYSKELALKTAQEVPGLRAVFGESYPDPVRVVALEFDINDILKDLHNPKWRST 717

Query: 760 SAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVD--- 816
           S ELCGGTH++ T + + F ++ E GIAKGIRRI AVT   A +A   A +L   ++   
Sbjct: 718 SIELCGGTHVAKTGDIKDFVVVEESGIAKGIRRIVAVTGHEAAEAQRRADALTARLNYLT 777

Query: 817 ---DASKIEG-------------SLLEKNQVR-----------KAQKKVAEENLQKAVKV 849
              DA K  G             SLL KN++R           K  K+      + AV  
Sbjct: 778 SASDAEKDSGLKSFTVELGQAEISLLRKNELRDQLATVRKAFDKQMKEKEAAANKAAVDS 837

Query: 850 ATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCA 909
             E  +   +    F +  ++VG + A V ++V +   + G  + VFS D    K     
Sbjct: 838 VIEYFQKNENAQAYFAV--LDVGAN-AKVLQSVAQQGRKLGKTIYVFSADAEGGKVAHIN 894

Query: 910 GVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAM 969
            V E + +S  L+   W     + L G+ G GK   A G G +  +V  A++ A  + A 
Sbjct: 895 YVSEAA-KSNGLDGRTWAGVVAEILGGKAG-GKEDSAQGVGINVTKVNEALEAARSYFAS 952

Query: 970 KL 971
           K+
Sbjct: 953 KV 954


>gi|320040301|gb|EFW22234.1| alanyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 964

 Score =  853 bits (2205), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 463/954 (48%), Positives = 604/954 (63%), Gaps = 51/954 (5%)

Query: 56  VEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQ 115
           VEWPA KVRDTF  FF+   H    SS VVP++DPTLLFANAGMNQYK IFLGT DPN+ 
Sbjct: 13  VEWPAIKVRDTFLDFFKKNGHTFVPSSSVVPLSDPTLLFANAGMNQYKSIFLGTVDPNSD 72

Query: 116 LSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELL 175
            ++L RA N+QKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK EAIE++WELL
Sbjct: 73  FAQLKRAHNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIEYSWELL 132

Query: 176 TKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTG 234
           TKVY L  DRLY TYF G++ AG+ PD E +D+WL   +    +L    KDNFWEMGD G
Sbjct: 133 TKVYGLEPDRLYVTYFEGNKDAGIEPDLETKDLWLSVGVKEDHILSGNMKDNFWEMGDQG 192

Query: 235 PCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           PCGPCSE+HYDR G R+AA LVN DDP  +EIWN VFIQ+NRES+  L+PLP KHVDTG+
Sbjct: 193 PCGPCSEVHYDRIGGRNAAHLVNMDDPNVLEIWNNVFIQYNRESESILRPLPNKHVDTGM 252

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           G+ERL S+LQ K SNYDTDVF P+FDAI++ TG RPYSGK G +D D +D AYRVVADH+
Sbjct: 253 GYERLVSVLQKKYSNYDTDVFTPLFDAIREITGVRPYSGKFGEEDLDGIDTAYRVVADHV 312

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVF 413
           RTL+FAI+DG+ P NEGR YV+RR+LRR  RY  + LK + G FF+ +V  +V  MG +F
Sbjct: 313 RTLTFAISDGAPPNNEGRGYVVRRVLRRGARYARKYLKVEIGNFFSKIVPTLVDQMGGMF 372

Query: 414 PELKQREAHIREIIAAEEASFGKTLLKGIEKFK---KAAQDVQGKVLSGQDAFILWDTYG 470
           PE+K+++  + EI+  EE SF KTL +G  +F+   + A+D     L G D + L+DT+G
Sbjct: 373 PEIKKKQTDVMEILDEEEISFAKTLDRGERQFEIYAQQAKDSGSNKLHGADVWRLYDTFG 432

Query: 471 FPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGV 530
           FP+DLTQLMAEERGL +D   F  A  +A+E S+  Q K A   + +     + L K  V
Sbjct: 433 FPVDLTQLMAEERGLSIDNVEFEEARLKAKEASK-GQAKAASDLLKLSVHDLSKLEKDKV 491

Query: 531 LATDDSFKFIWFQDHKSVIKAIYTGSEFIESV--VP-GNEVGIVLASSSFYAEQGGQIFD 587
             T+D  KF    +  S I A+Y   EF++S   +P G+++GI+L  ++FYAEQGGQ +D
Sbjct: 492 PKTNDDAKF-GRGNILSQIVAVYHDKEFVDSTSGIPEGDQIGIILDKTNFYAEQGGQEYD 550

Query: 588 EG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            G   I+G      VRNVQ+YGG+V H G +    G  SVG+ VI + D  RR  I  NH
Sbjct: 551 TGKIIIDGK-AELDVRNVQMYGGYVFHTGFIK--YGNLSVGDSVISEYDELRRWPIRNNH 607

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           T TH+LNFALREVLG+ +DQKGS+V  EKLRFDFSH   V    L +IE    E I+   
Sbjct: 608 TGTHILNFALREVLGNGIDQKGSLVAAEKLRFDFSHKSGVSDSDLEKIEEKCTEYIRQNC 667

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            V+SK+  L+ A+ I G+RAVFGE YPDPVRVV++G ++E++L D ++  W  +S E CG
Sbjct: 668 AVYSKDVPLSVAREITGVRAVFGETYPDPVRVVSVGVELEEILKDVKDPRWKGVSIEFCG 727

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLA----------------YKAFEAAC 809
           GTH+  T + +   +L E GIAKGIRRI AVT   A                ++  E   
Sbjct: 728 GTHVQKTGDIKDLVILEEGGIAKGIRRIIAVTGEDAHEVQRIAKEFGDRLNRFEKMEIGP 787

Query: 810 SLEKEVD----DASKIEGSLLEK-----------NQVRKAQKKVAEENLQKAVKVATETA 854
             E+E      D +++  S +EK            QV +AQK + ++ ++ A+       
Sbjct: 788 KKEQEAKLIQADLNQLSISAVEKARFREQFARIHKQVLEAQKALQKQEIKAALDAINSHF 847

Query: 855 EAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQ-KGMPVMVFSTDETTNKAVVCAGVPE 913
           E   +      I R+    +A A+ E++     + K   + VF+ D    +  V  G   
Sbjct: 848 EKPENKDSSHLIVRLPTSANAKAISESINHAKSKLKDKSIYVFAADAEQGR--VAHGCYV 905

Query: 914 KSDQSKQ-LEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEF 966
            S  S Q    S W       + G+ G GK   + G GT+  +V  A++ A ++
Sbjct: 906 SSSLSAQGASASNWSGVVSGIVGGKAG-GKAPTSIGNGTEVDRVDEAIEAATKY 958


>gi|193656980|ref|XP_001950431.1| PREDICTED: alanyl-tRNA synthetase, cytoplasmic-like [Acyrthosiphon
           pisum]
          Length = 955

 Score =  853 bits (2205), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 458/959 (47%), Positives = 614/959 (64%), Gaps = 56/959 (5%)

Query: 60  ATKVRDTFFKFFEDKN-HVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSK 118
           A ++RD + KFF DK  H    SS VVPV+DPTLLFANAGMNQ+KPIFLGT  P++ ++K
Sbjct: 5   AKEIRDRYIKFFIDKKGHEYVYSSSVVPVDDPTLLFANAGMNQFKPIFLGTVAPSSDMAK 64

Query: 119 LTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKV 178
             RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFGDYFK E  +WAWE LT+ 
Sbjct: 65  WKRAVNTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKTEICQWAWEFLTQE 124

Query: 179 YRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCG 237
           ++L  DRLY TYFGGD+K+GL PD E ++IWLK  L    ++P   KDNFWEMG+TGPCG
Sbjct: 125 FKLSPDRLYVTYFGGDKKSGLEPDLECKNIWLKLGLAEDHIIPGNMKDNFWEMGETGPCG 184

Query: 238 PCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFE 297
           PCSEIHYDR GNR AA LVN DDP  +EIWN+VF+Q+NR  +G+L  LP KH+D G+GFE
Sbjct: 185 PCSEIHYDRIGNRLAADLVNQDDPDVLEIWNLVFMQYNRNQEGTLHNLPKKHIDCGMGFE 244

Query: 298 RLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTL 357
           RL S++Q+K SNYDTD+F P+F AIQ  T A PY GKVGADD D+ DMAYRV+ADH RTL
Sbjct: 245 RLVSVIQDKRSNYDTDLFQPLFVAIQNGTNAPPYEGKVGADDIDQKDMAYRVLADHARTL 304

Query: 358 SFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELK 417
           + A++DG  P N GR YVLRRILRRAVRY +E L  + GFF  LVN+VV ++GD FPE+ 
Sbjct: 305 TIALSDGGSPDNTGRGYVLRRILRRAVRYATEKLNGKPGFFATLVNVVVDLLGDTFPEIT 364

Query: 418 QREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQ 477
           +    I EII  EE  F +TL +G     +    +  KV+ G+ A+ L+DTYGFP+DLT 
Sbjct: 365 KDPQQIIEIINEEEEQFLRTLSRGRNLLNRTILKLTDKVIPGEVAWKLYDTYGFPVDLTY 424

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGG---AIVMDADATAALHKRGVLATD 534
           LM EE+G  +D+E +    +EA+++++     + GG    I +D  A A L  +G+  TD
Sbjct: 425 LMVEEKGFTIDMEAY----EEAKKKAQLISQNKVGGDKEVISLDVHALADLQTKGISTTD 480

Query: 535 DSFKFIW------------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQG 582
           DS K+ +            F+   S + +I   ++F+  V    E GI+L  + FYAEQG
Sbjct: 481 DSPKYNYKAVSDDADAEYTFETCTSTVLSIRLINQFVNEVDTFQECGIILDKTCFYAEQG 540

Query: 583 GQIFDEG-FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLI 641
           GQI+D+G  ++  F  FYV NVQ+ GG+++H+G L  G+    VG++V+ K+D  RR+ +
Sbjct: 541 GQIYDQGSMVKDEFTEFYVNNVQLRGGYILHVGILESGS--LKVGDKVVLKIDEKRRRFV 598

Query: 642 APNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQI 701
             NHT TH LN  LR VLGD+++QKGS+V P+KLRFDF++   +  + + ++E + NE I
Sbjct: 599 MNNHTATHTLNHTLRVVLGDNLNQKGSLVAPDKLRFDFNNKAALTGDQVAKVEKLTNEVI 658

Query: 702 KAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISA 761
           K    V++K A L +AK I GLRA+F E YPDPVRVV++G  V+ LL DPE    L  S 
Sbjct: 659 KRNDTVYAKIAPLNDAKRIKGLRAMFDETYPDPVRVVSVGVTVDKLLTDPEGNSGLETSV 718

Query: 762 ELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV------ 815
           E CGGTHL  T   E F +LSEE I+KGIRRI AVT   A KA+     L+K+V      
Sbjct: 719 EFCGGTHLHKTGHMECFTILSEEAISKGIRRIVAVTGPEATKAYNRGEELKKDVMKLDSK 778

Query: 816 ---------DDASKIEGSLLE---KNQVRKA----QKKVAEENLQKAVKVATETAEA--- 856
                    D   KI  S++    K ++R      +K +AEE  ++ V  A+E A++   
Sbjct: 779 DVNLSKAIIDTQDKINKSVIPYWVKEELRSVLSGLKKGIAEEERKQLVAQASEVAKSIKT 838

Query: 857 --AASNGKPFCISRVEVGLDAAAVREAVLKVI--EQKGMPVMVFSTDETTNKAVVCAGVP 912
              + + K   I +++VG +   V +AVLK++  +   + +M+ S D T  K + C  V 
Sbjct: 839 KICSESDKTVFIYKLDVGSN-TKVMDAVLKLLKADMPNISIMLLSED-TEGKRIYCQCVV 896

Query: 913 EKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
            K    K L  ++W+T     + G+ G GK   A   G +   V   + +  +FA++ +
Sbjct: 897 SKDLNKKGLMANKWVTKIASCINGK-GGGKADTAQASGCNETGVEQLISIGEQFASLSI 954


>gi|378732975|gb|EHY59434.1| alanyl-tRNA synthetase [Exophiala dermatitidis NIH/UT8656]
          Length = 1107

 Score =  853 bits (2205), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 467/956 (48%), Positives = 609/956 (63%), Gaps = 55/956 (5%)

Query: 57   EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
            EW A KVR+TF K+FE++ H   +SSPVVP++DPTLLF NAGMNQ+KPIFLGT DP ++ 
Sbjct: 153  EWTAPKVRETFLKYFEERGHTFVRSSPVVPLSDPTLLFTNAGMNQFKPIFLGTVDPTSKE 212

Query: 117  SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
             +L RA N+QKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK EAI ++WELLT
Sbjct: 213  GQLKRAVNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIGYSWELLT 272

Query: 177  KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
            KV+ L  DRLY TYF G+E  GL PD EA+++W    +P   +LP   KDNFWEMGD GP
Sbjct: 273  KVFGLDPDRLYVTYFEGNEAGGLEPDLEAKELWKSVGVPEDHILPGNMKDNFWEMGDQGP 332

Query: 236  CGPCSEIHYDRT-GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
            CGPCSE+HYDR  G R+AASLVN DDP  +EIWN VFIQ+NRE D SL+PLP KHVDTG+
Sbjct: 333  CGPCSEVHYDRIGGGRNAASLVNQDDPNVLEIWNNVFIQYNREPDKSLRPLPNKHVDTGM 392

Query: 295  GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
            GFERL S+LQ+K+SNYDTDVF P+FD IQ+ TGARPY+GK G +D D VD AYRVVADH+
Sbjct: 393  GFERLVSVLQDKLSNYDTDVFTPLFDRIQEVTGARPYAGKFGDEDKDGVDTAYRVVADHV 452

Query: 355  RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVF 413
            R L+FAI+DG  P NEGR YV+RR+LRR  RY  + L  + G FF+ +V  +V  MGD+F
Sbjct: 453  RMLTFAISDGGIPNNEGRGYVVRRVLRRGARYARKYLNVEIGNFFSRVVPTLVAQMGDMF 512

Query: 414  PELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG---KVLSGQDAFILWDTYG 470
             E+  +E  ++EI+  EE SF KTL +G  +F+  AQ  Q    K L G D + L+DT+G
Sbjct: 513  KEIVAKEEEVKEILDEEELSFAKTLDRGERQFEVYAQKSQAQGLKKLHGADVWRLYDTFG 572

Query: 471  FPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR-G 529
            FP+DLT+LMAEERGL +D   F  A  +ARE S+  + K A   + +D      L K  G
Sbjct: 573  FPVDLTRLMAEERGLSIDDNEFEEARLKAREASK-GEKKAASNLLKLDVHDLGELEKMPG 631

Query: 530  VLATDDSFKFIWFQDHKSVIKAIYTGSEFIE---SVVPGNEVGIVLASSSFYAEQGGQIF 586
            V  TDDS KF    +    I+AIY   +F E   +V  G +VG++L  ++FYAEQGGQ +
Sbjct: 632  VTKTDDSAKF-GRDNINGKIQAIYHAKKFHEDTRNVPEGEQVGLILDKTNFYAEQGGQEY 690

Query: 587  DEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
            D G   I+G      V NVQ+Y G+V+H G +    G FS G+  IC+ D  RR  I  N
Sbjct: 691  DTGRIVIDGQ-AELEVENVQVYAGYVLHTGYMK--YGHFSTGDVAICEYDELRRWPIRNN 747

Query: 645  HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
            HT TH+LNFALREVLGD +DQKGS+V PEKLRFDFSH  PV    L +IE I  E I+  
Sbjct: 748  HTGTHILNFALREVLGDGIDQKGSLVAPEKLRFDFSHKAPVSDADLAKIEDISTEYIRQN 807

Query: 705  LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
              V+ K+  LA A+ I G+RAVFGE YPDPVRVV++G +V+D+L + +++ W ++S E C
Sbjct: 808  CPVYGKDVPLAIAREITGVRAVFGETYPDPVRVVSVGVEVDDILKNVKDERWRTVSIEFC 867

Query: 765  GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV--------- 815
            GGTH+ +T + +   +L E GIAKGIRRI AVT   A+     A   E+++         
Sbjct: 868  GGTHVRSTGDIKDLVILEESGIAKGIRRIIAVTGEDAHTVQRVADEFEQKLTKLENMPFG 927

Query: 816  -----------DDASKIEGSLLEKNQVR-----------KAQKKVAEENLQKAVKVATET 853
                        +   +  S L+K+Q R             QKK+ +E  +KA+   TE 
Sbjct: 928  PEKEQEVKATQSELDNLSISALKKSQFRDRFTKISKQVLDHQKKLQKEETKKAIDTITEY 987

Query: 854  AEAAASNGKPFCISRVEVGLDAAAVREAVLK----VIEQKGMPVMVFSTDETTNKAVVCA 909
             E          + ++ V  + + +   V+K     I+ K + + V   D+     V+  
Sbjct: 988  FEKNPDAQG--AVLKLPVSTNNSKIIPEVIKHVQTKIKDKSVYIFVAGDDKDAEGKVLHG 1045

Query: 910  GVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAE 965
                 +     L  S+W +   + + G+ G GK  +A G GT+ ++V  A+  A E
Sbjct: 1046 CFVSPAHAKAGLNSSDWASTVTKLVGGKAG-GKAPVAIGNGTEPSKVDDALKAATE 1100


>gi|393230342|gb|EJD37949.1| hypothetical protein AURDEDRAFT_116636 [Auricularia delicata
           TFB-10046 SS5]
          Length = 954

 Score =  853 bits (2204), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 467/952 (49%), Positives = 588/952 (61%), Gaps = 48/952 (5%)

Query: 53  PQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADP 112
           P   EW A  VR  FF FFE   H   +SS  +P  DPTLLFANAGMNQYK IFLGT DP
Sbjct: 5   PYTGEWSAKNVRKAFFDFFEKNGHTFVRSSSTIPHEDPTLLFANAGMNQYKSIFLGTVDP 64

Query: 113 NTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAW 172
            + L+KL RA N+QKCIRAGGKHNDL+DVGKD+YHHTFFEMLGNWSFGDYFK EAI W+W
Sbjct: 65  KSDLAKLKRAYNSQKCIRAGGKHNDLEDVGKDSYHHTFFEMLGNWSFGDYFKKEAITWSW 124

Query: 173 ELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMG 231
           +LLT+VY+LP DRLY TYF G+  AGL PD+EARDIWL   L  SRVL    KDNFWEMG
Sbjct: 125 QLLTEVYKLPKDRLYVTYFEGNPAAGLEPDHEARDIWLSLGLDPSRVLTGSAKDNFWEMG 184

Query: 232 DTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVD 291
            TGPCGPCSEIHYDR G R+AA LVN DDP  +EIWN VFIQFNRE DGSLK LPAKHVD
Sbjct: 185 ATGPCGPCSEIHYDRIGGRNAAHLVNQDDPLVLEIWNNVFIQFNREDDGSLKSLPAKHVD 244

Query: 292 TGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVA 351
           TG+GFERL S+ Q+K SNYDTD+F P+F  IQ+ TGARPY G  G DD D +D AYRV+A
Sbjct: 245 TGMGFERLVSVCQDKHSNYDTDLFAPLFSRIQELTGARPYKGGFGQDDPDGIDTAYRVIA 304

Query: 352 DHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMG 410
           DH+RTL+FA++DG  P N GR YVLRRILRR  R+  +    + G FF+ L   ++  +G
Sbjct: 305 DHVRTLTFALSDGGVPNNVGRGYVLRRILRRGARFARKKFNVEIGSFFSSLAPTLIDQLG 364

Query: 411 DVFPELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWD 467
           DVFPEL ++   I+EI+  EEASF +TL +G    E++   A++   K L G+D + L+D
Sbjct: 365 DVFPELTKKYDDIKEILDEEEASFARTLDRGEKLFERYVAQARESGAKELGGKDVWRLYD 424

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
           TYGFP+DLT+LMAEE GL ++   F  A   + E S+ A  +     + +D    A L  
Sbjct: 425 TYGFPVDLTRLMAEELGLGINEADFEAARLHSLEASKGAGKQGNKDIVKLDVHDIAKLEA 484

Query: 528 RG-VLATDDSFKFIWFQ--DHKSVIKAIYTGSEFIES---VVPGNEVGIVLASSSFYAEQ 581
              V  T+DS KF+  +  +  +V+KAIY    F++S   +  G   G++L  ++FYAE 
Sbjct: 485 DATVPKTEDSSKFLQGKAAEITAVVKAIYYNKSFVQSTKDITEGESFGVILDRTNFYAEA 544

Query: 582 GGQIFDEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRK 639
           GGQ  D G   I+G   +F V NVQ + G+V+H+G L EG     VG+ V+   D  RR 
Sbjct: 545 GGQENDTGSIVIDGE-AAFEVSNVQAFNGYVLHVGELKEGT--LKVGDTVLPMYDELRRW 601

Query: 640 LIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNE 699
            +  NHT TH+LNF LRE LGDH+DQKGS+V P KLRFDFSH   +    L++IE    E
Sbjct: 602 PLRNNHTATHILNFCLRETLGDHIDQKGSLVAPTKLRFDFSHKAQIALPDLQKIEEGSKE 661

Query: 700 QIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSI 759
            I+  + VFSKE  L     I GLRAVFGE YPDPVRVVA+   V+++  D EN +W S 
Sbjct: 662 WIRRNVKVFSKEVGLKNGFKIPGLRAVFGEAYPDPVRVVALEYDVDEIAKDLENPKWRST 721

Query: 760 SAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDAS 819
           S E CGGTH++ T   + F +  E GIAKGIRRI AVT   A +    A  LE+ +    
Sbjct: 722 SIEFCGGTHVAETGTIKDFIITEESGIAKGIRRIIAVTGYEAAEVTRVAAGLEQSIARLD 781

Query: 820 KIEGS---------LLEKNQ-----VRKAQKK--------------VAEENLQKAVKVAT 851
            + G           LE NQ     +RKA+ K               A E  Q    V T
Sbjct: 782 SLHGKEKDTAMKALTLELNQADISVLRKAELKESLLKVRKAFDDEVKAREKAQTKTAVDT 841

Query: 852 ETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGV 911
            +     S   P  +  VE G   A + ++V+   +    PV VF+ DE   K +  A V
Sbjct: 842 VSQHFKDSPNSPVWVGVVEGG--NAKLLQSVMNQGKALNKPVYVFTRDEAGEKILHAAFV 899

Query: 912 PEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLA 963
           P+ S  S   +   W  +  + + G+ G GK   A G GT+  ++  A+ +A
Sbjct: 900 PQ-SQVSSSFDARVWAASVSEIIGGKAG-GKPDAAQGVGTNVEKLEEALAVA 949


>gi|17506981|ref|NP_491281.1| Protein AARS-2 [Caenorhabditis elegans]
 gi|74955985|sp|O01541.1|SYAC_CAEEL RecName: Full=Alanine--tRNA ligase, cytoplasmic; AltName:
           Full=AlaRS A; AltName: Full=Alanyl-tRNA synthetase
 gi|351062273|emb|CCD70212.1| Protein AARS-2 [Caenorhabditis elegans]
          Length = 968

 Score =  853 bits (2204), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 463/969 (47%), Positives = 606/969 (62%), Gaps = 72/969 (7%)

Query: 60  ATKVRDTFFKFF-EDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSK 118
           A++VR TF  FF E K H    SS V+P +DPTLLFANAGMNQ+KP+FLG ADPN+ L+K
Sbjct: 6   ASEVRSTFINFFREKKEHTYVHSSSVIPHDDPTLLFANAGMNQFKPLFLGIADPNSDLAK 65

Query: 119 LTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKV 178
           L RA NTQKCIRAGGKHNDLDDVGKD YHHT+FEMLGNWSFGDYFK E I WAWELLT V
Sbjct: 66  LKRAVNTQKCIRAGGKHNDLDDVGKDVYHHTYFEMLGNWSFGDYFKKEIITWAWELLTTV 125

Query: 179 YRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCG 237
           Y +PA+RLY + FGGDE  G+  D+EARDIW    +P  R+L FG KDNFWEMGD GPCG
Sbjct: 126 YGIPAERLYVSVFGGDEANGVPADSEARDIWRSVGVPDERILNFGMKDNFWEMGDVGPCG 185

Query: 238 PCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFE 297
           PCSEIHYDR GNRDA+ LVN DDP  +EIWN+VFIQFNRE  G LKPLPAKH+D GLG E
Sbjct: 186 PCSEIHYDRIGNRDASHLVNADDPMVVEIWNLVFIQFNREEGGVLKPLPAKHIDCGLGLE 245

Query: 298 RLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTL 357
           RL +++Q+K SNYDTD+F PIF+AI + +G R Y+G +G +D D VDMAYRVVADH+RTL
Sbjct: 246 RLIAVMQDKTSNYDTDIFQPIFEAIHKGSGVRAYTGFIGDEDKDGVDMAYRVVADHVRTL 305

Query: 358 SFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELK 417
           + A++DG  P N GR YVLRRILRR VRY SE L AQ GFF  LV +V+ ++G+ FPEL 
Sbjct: 306 TIALSDGGRPDNSGRGYVLRRILRRGVRYASEKLNAQPGFFASLVPVVISILGETFPELS 365

Query: 418 QREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLS--GQDAFILWDTYGFPLDL 475
           +    + +II  EE  F KTL +G   F++A Q +    ++  G  ++ L+DTYGFP DL
Sbjct: 366 RDPVTVMDIINDEEKQFLKTLSRGRVLFQRAVQSLPEGTMTFPGDVSWRLYDTYGFPADL 425

Query: 476 TQLMAEERGLLVDIEGFNNAMDEARER---SRSAQNKQAGGAIVMDADATAALHKRGVLA 532
           TQLMAEE+GL VD    N A +EAR +   + SA   +    + +D  A A L ++GV  
Sbjct: 426 TQLMAEEKGLSVD----NTAFEEARRKAIETSSAGTGKFRDTLDLDVHALAELQQKGVPT 481

Query: 533 TDDSFKFIW------------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAE 580
           TDDS K+ +            F+     I AI    +F++ +  G E  I+L  ++FYAE
Sbjct: 482 TDDSPKYAYTFTGEGSDAVYKFEPCVGKILAIRRDGKFVDQLAAGEEGAILLDRTNFYAE 541

Query: 581 QGGQIFDEGFIEGL---FGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDR 637
           QGGQI+D G +  +      F V N Q+ GG+++ +GS     G FSVG++V  + D DR
Sbjct: 542 QGGQIYDVGVLTKVNDESNEFNVSNCQVRGGYIVLVGS---AEGSFSVGDQVNERFDEDR 598

Query: 638 RKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIV 697
           ++LI  NHT TH+LN+ALR+VL D  DQKGS+V P+++RFDF++   +  + +++ E   
Sbjct: 599 KQLIMKNHTGTHVLNYALRKVLADS-DQKGSLVAPDRMRFDFTNKAGMTVQQVKKAEEYA 657

Query: 698 NEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWL 757
            + I  +  V++K + L EAK + GLRA+F E YPDPVRVVA+G  VE LL +P+ +E  
Sbjct: 658 QQLIDTKGQVYAKNSPLGEAKKVKGLRAMFDETYPDPVRVVAVGTPVEQLLQNPDAEEGQ 717

Query: 758 SISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAA----CSLEK 813
           + + E CGGTHL N        + SEE IAKGIRRI A+T   A +A   A      LE+
Sbjct: 718 NTTVEFCGGTHLQNVSHIGRIVIASEEAIAKGIRRIVALTGPEAERAIARADRLTARLEE 777

Query: 814 EVDDASKIEGSLLEKNQVRKAQKKVAE----------------------ENLQK------ 845
           E   A K +  L  K++ +  QKK+ E                      + +QK      
Sbjct: 778 ESKHADKKDELLANKDKFKALQKKIQEIVDEANGAQLPYWRKDSIREKAKAIQKTLDGYT 837

Query: 846 -------AVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFST 898
                  A KV  E  E AA   +P  +  V      +   +  LK+++     VM FS 
Sbjct: 838 KAQQAAVAEKVLGEAKELAAVAEQPTVLVHVFAANANSKAIDNALKLLKDT-KAVMAFSV 896

Query: 899 DETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTP 958
           +E + K V+C    +KS  S  L+ +EW+      L G+ G GK   A   G +  ++  
Sbjct: 897 NEDSGK-VLCLAKVDKSLVSNGLKANEWVNEVCTVLGGKGG-GKDANAQLTGENVDKLDA 954

Query: 959 AMDLAAEFA 967
           A++LA +FA
Sbjct: 955 AVELAQKFA 963


>gi|317157868|ref|XP_001826622.2| alanyl-tRNA synthetase, cytoplasmic [Aspergillus oryzae RIB40]
          Length = 1015

 Score =  853 bits (2203), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 473/1007 (46%), Positives = 628/1007 (62%), Gaps = 74/1007 (7%)

Query: 20   LLNPSLTLAVTNHH-HS------LISRFSASAVAA---MPGADPQVVEWPATKVRDTFFK 69
            LL+P  +   T +H H+      L S  SA+ ++A   M        EW A  VRD F +
Sbjct: 17   LLSPPRSNPRTFYHLHTSPPPPPLRSALSANTISAPLRMNSNIQSSPEWTAKSVRDAFIQ 76

Query: 70   FFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRACNTQKCI 129
            +F+   H    S+PVVP +DPTLLF NAGMNQ+K IFLGT DP +  + L  A NTQKCI
Sbjct: 77   YFQKNGHTFVASAPVVPHSDPTLLFTNAGMNQFKSIFLGTVDPQSDFANLKSAVNTQKCI 136

Query: 130  RAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLPADRLYAT 189
            RAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK EAI ++WEL+TK+Y L   RLY T
Sbjct: 137  RAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAINYSWELMTKIYGLDPQRLYVT 196

Query: 190  YFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTG 248
            YF G ++ GL+PD EA+++W    +P   +LP   KDNFWEMGD GPCGPCSEIHYDR G
Sbjct: 197  YFEGSKEGGLSPDLEAKELWKAVGVPEDHILPGNMKDNFWEMGDQGPCGPCSEIHYDRIG 256

Query: 249  NRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMS 308
             R+A++LVN DDP  +EIWN VFIQ+NRESD SLKPLP KHVDTG+GFERL S+LQNK S
Sbjct: 257  GRNASNLVNQDDPNVLEIWNNVFIQYNRESDRSLKPLPNKHVDTGMGFERLVSVLQNKSS 316

Query: 309  NYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPG 368
            NYDTDVF P+F  I+  TGARPY G+ G +DAD +D AYRVVADH+RTL+FAI+DG  P 
Sbjct: 317  NYDTDVFSPLFQTIKDITGARPYQGRFGVEDADGIDTAYRVVADHVRTLTFAISDGVAPN 376

Query: 369  NEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFPELKQREAHIREII 427
            NEGR YV+RR+LRR  RY  +  + + G FF+ +V  +V  MGD+FPE+K+++  + EI+
Sbjct: 377  NEGRGYVIRRVLRRGARYARKYFRVEIGNFFSKIVPTLVDQMGDMFPEVKRKQQDVMEIL 436

Query: 428  AAEEASFGKTLLKGIEKFKKAAQDVQGK---VLSGQDAFILWDTYGFPLDLTQLMAEERG 484
              EE SF KTL +G  +F+  AQ  + K    L G D + L+DT+GFP+DLT++MAEERG
Sbjct: 437  DEEEISFAKTLDRGERQFEHYAQQAKAKGDDKLHGADVWRLYDTFGFPVDLTRIMAEERG 496

Query: 485  LLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRG-VLATDDSFKFIWFQ 543
            L +D   F  A   A+E S+  Q K A   + +D      L K   V  T+DS KF    
Sbjct: 497  LRIDDTEFEEARSRAKEASK-GQKKAAADTVKLDVHDLGKLEKMNDVPKTNDSAKF---- 551

Query: 544  DHKSV---IKAIYTGSEF---IESVVPGNEVGIVLASSSFYAEQGGQIFDEG--FIEGLF 595
            D  ++   +KAIY G  F    E +  G+++G++L  ++FYAEQGGQ  D G   I+G  
Sbjct: 552  DRGNITAQVKAIYHGKSFHLSTEQIPEGDQLGLILDRTNFYAEQGGQENDTGRIVIDGQ- 610

Query: 596  GSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFAL 655
                V +VQ+Y G+V+H G +  G+   SVG+EVIC+ D  RR  I  NHT TH+LNFAL
Sbjct: 611  AELEVGDVQLYAGYVLHTGFMKYGS--LSVGDEVICEYDELRRWPIRNNHTGTHILNFAL 668

Query: 656  REVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLA 715
            +EVLGD V+QKGS+V  EKLRFDFSH  PV  + L RIE I  E I+    V+S+E  LA
Sbjct: 669  KEVLGDGVEQKGSLVAAEKLRFDFSHKSPVTDKDLERIEDISTEYIRQNCAVYSQEVPLA 728

Query: 716  EAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREA 775
             A+ I+G+RAVFGE YPDPVRVV++G ++E++L + ++  W  +S E CGGTH+  T + 
Sbjct: 729  TARQISGVRAVFGETYPDPVRVVSVGVELEEILKNVKDPRWEKVSIEFCGGTHVQKTGDI 788

Query: 776  EAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVD------------------- 816
            +   +L E GIAKGIRRI AVT   A++    A   EK +D                   
Sbjct: 789  KELVILEESGIAKGIRRIIAVTGEDAHEVQRVALGFEKRLDRLEAMALGPEKEQDAKQIQ 848

Query: 817  -DASKIEGSLLEKNQVR--------------KAQKKVAEENLQKAVKVATETAEAAASNG 861
             D S++  S ++K++ R              KAQ+K+     +KA++  T   E   +  
Sbjct: 849  VDLSQLLISAVQKSRFRERFAHINKQIIDSQKAQQKLES---KKALEAITSYFENPENKD 905

Query: 862  KPFCISRVEVGLDAAAVREAVLKVIEQ-KGMPVMVFSTDETTNKAVV-CAGVPEKSDQSK 919
            K + ++R+ +  +A AV E++  V  + +   V V + D    + V  C      SDQ  
Sbjct: 906  KSWLVARLPISANAKAVSESLNHVKSKLQDKTVYVLAADSNQGRVVHGCYMSKAISDQGA 965

Query: 920  QLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEF 966
                S+W  A +    G    GKG  + G GT+  +   A+ LA+++
Sbjct: 966  S--ASDW-AAIVSTAVGGKAGGKGPTSIGNGTNPDKTDEAIALASDY 1009


>gi|303321650|ref|XP_003070819.1| Alanyl-tRNA synthetase, cytoplasmic , putative [Coccidioides
            posadasii C735 delta SOWgp]
 gi|240110516|gb|EER28674.1| Alanyl-tRNA synthetase, cytoplasmic , putative [Coccidioides
            posadasii C735 delta SOWgp]
          Length = 1023

 Score =  853 bits (2203), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 463/954 (48%), Positives = 604/954 (63%), Gaps = 51/954 (5%)

Query: 56   VEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQ 115
            VEWPA KVRDTF  FF+   H    SS VVP++DPTLLFANAGMNQYK IFLGT DPN+ 
Sbjct: 72   VEWPAIKVRDTFLDFFKKNGHTFVPSSSVVPLSDPTLLFANAGMNQYKSIFLGTVDPNSD 131

Query: 116  LSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELL 175
             ++L RA N+QKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK EAIE++WELL
Sbjct: 132  FAQLKRAHNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIEYSWELL 191

Query: 176  TKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTG 234
            TKVY L  DRLY TYF G++ AG+ PD E +D+WL   +    +L    KDNFWEMGD G
Sbjct: 192  TKVYGLEPDRLYVTYFEGNKDAGIEPDLETKDLWLSVGVKEDHILSGNMKDNFWEMGDQG 251

Query: 235  PCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
            PCGPCSE+HYDR G R+AA LVN DDP  +EIWN VFIQ+NRES+  L+PLP KHVDTG+
Sbjct: 252  PCGPCSEVHYDRIGGRNAAHLVNMDDPNVLEIWNNVFIQYNRESESILRPLPNKHVDTGM 311

Query: 295  GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
            G+ERL S+LQ K SNYDTDVF P+FDAI++ TG RPYSGK G +D D +D AYRVVADH+
Sbjct: 312  GYERLVSVLQKKYSNYDTDVFTPLFDAIREITGVRPYSGKFGEEDLDGIDTAYRVVADHV 371

Query: 355  RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVF 413
            RTL+FAI+DG+ P NEGR YV+RR+LRR  RY  + LK + G FF+ +V  +V  MG +F
Sbjct: 372  RTLTFAISDGAPPNNEGRGYVVRRVLRRGARYARKYLKVEIGNFFSKIVPTLVDQMGGMF 431

Query: 414  PELKQREAHIREIIAAEEASFGKTLLKGIEKFK---KAAQDVQGKVLSGQDAFILWDTYG 470
            PE+K+++  + EI+  EE SF KTL +G  +F+   + A+D     L G D + L+DT+G
Sbjct: 432  PEIKKKQTDVMEILDEEEISFAKTLDRGERQFEIYAQQAKDSGSNKLHGADVWRLYDTFG 491

Query: 471  FPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGV 530
            FP+DLTQLMAEERGL +D   F  A  +A+E S+  Q K A   + +     + L K  V
Sbjct: 492  FPVDLTQLMAEERGLSIDNVEFEEARLKAKEASK-GQAKAASDLLKLSVHDLSKLEKDKV 550

Query: 531  LATDDSFKFIWFQDHKSVIKAIYTGSEFIESV--VP-GNEVGIVLASSSFYAEQGGQIFD 587
              T+D  KF    +  S I A+Y   EF++S   +P G+++GI+L  ++FYAEQGGQ +D
Sbjct: 551  PKTNDDAKF-GRGNILSQIVAVYHDKEFVDSTSGIPEGDQIGIILDKTNFYAEQGGQEYD 609

Query: 588  EG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
             G   I+G      VRNVQ+YGG+V H G +    G  SVG+ VI + D  RR  I  NH
Sbjct: 610  TGKIIIDGK-AELDVRNVQMYGGYVFHTGFIK--YGNLSVGDSVISEYDELRRWPIRNNH 666

Query: 646  TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
            T TH+LNFALREVLG+ +DQKGS+V  EKLRFDFSH   V    L +IE    E I+   
Sbjct: 667  TGTHILNFALREVLGNGIDQKGSLVAAEKLRFDFSHKSGVSDSDLEKIEEKCTEYIRQNC 726

Query: 706  DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
             V+SK+  L+ A+ I G+RAVFGE YPDPVRVV++G ++E++L D ++  W  +S E CG
Sbjct: 727  AVYSKDVPLSVAREITGVRAVFGETYPDPVRVVSVGVELEEILKDVKDPRWKGVSIEFCG 786

Query: 766  GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLA----------------YKAFEAAC 809
            GTH+  T + +   +L E GIAKGIRRI AVT   A                ++  E   
Sbjct: 787  GTHVQKTGDIKDLVILEEGGIAKGIRRIIAVTGEDAHEVQRIAKEFGDRLNRFEKMEIGP 846

Query: 810  SLEKEVD----DASKIEGSLLEK-----------NQVRKAQKKVAEENLQKAVKVATETA 854
              E+E      D +++  S +EK            QV +AQK + ++ ++ A+       
Sbjct: 847  KKEQEAKLIQADLNQLSISAVEKARFREQFARIHKQVLEAQKALQKQEIKAALDAINSHF 906

Query: 855  EAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQ-KGMPVMVFSTDETTNKAVVCAGVPE 913
            E   +      I R+    +A A+ E++     + K   + VF+ D    +  V  G   
Sbjct: 907  EKPENKDSSHLIVRLPTSANAKAISESINHAKSKLKDKSIYVFAADAEQGR--VAHGCYV 964

Query: 914  KSDQSKQ-LEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEF 966
             S  S Q    S W       + G+ G GK   + G GT+  +V  A++ A ++
Sbjct: 965  SSSLSAQGASASNWSGVVSGIVGGKAG-GKAPTSIGNGTEVDRVDEAIEAATKY 1017


>gi|410079893|ref|XP_003957527.1| hypothetical protein KAFR_0E02390 [Kazachstania africana CBS 2517]
 gi|372464113|emb|CCF58392.1| hypothetical protein KAFR_0E02390 [Kazachstania africana CBS 2517]
          Length = 956

 Score =  852 bits (2202), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 454/941 (48%), Positives = 594/941 (63%), Gaps = 42/941 (4%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           +W AT VR+TF  +F  K H   KSSPVVP +DPTLLFANAGMNQYKPIFLGT DP ++ 
Sbjct: 8   KWTATNVRNTFLNYFNSKEHKFIKSSPVVPFDDPTLLFANAGMNQYKPIFLGTVDPASEF 67

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
             L RA N+QKC+RAGGKHNDL+DVGKD+YHHTFFEMLGNWSFGDYFK +AI +AW+LLT
Sbjct: 68  YTLKRAYNSQKCVRAGGKHNDLEDVGKDSYHHTFFEMLGNWSFGDYFKTDAIHYAWDLLT 127

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
            VY +P DRLY TYF GD K GL  D EAR +W    +P   +LP   KDNFWEMGD GP
Sbjct: 128 NVYGIPKDRLYVTYFEGDAKQGLEADEEARQLWRDVGVPEDHILPGNAKDNFWEMGDQGP 187

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPCSEIHYDR G R+AASLVN DDP  +E+WN+VFIQ+NRESDGSLK LPAKH+DTG+G
Sbjct: 188 CGPCSEIHYDRIGGRNAASLVNQDDPDVLEVWNLVFIQYNRESDGSLKSLPAKHIDTGMG 247

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
           FERL S+LQ+  SNYDTDVF P+F  IQ+ TGAR Y+GK G +D D +D AYRV+ADH+R
Sbjct: 248 FERLVSVLQDVRSNYDTDVFQPLFAKIQEITGARSYTGKFGDEDKDNIDTAYRVLADHVR 307

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFP 414
           TL+FA+ADG  P NEGR YVLRRILRR  RY  + +    G FF+ L   +++ + D+FP
Sbjct: 308 TLTFALADGGVPNNEGRGYVLRRILRRGARYARKYMNYPIGNFFSTLAPTLIEQVKDIFP 367

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTYGF 471
           EL +  + + EI+  EEASF KTL +G    EK+   A     K L G+  + L+DTYGF
Sbjct: 368 ELTKDPSFLFEILDEEEASFAKTLDRGERLFEKYATTASQTTSKTLDGKQVWRLYDTYGF 427

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           P+DLT+LMAEE+GL +D  GF  A  E+ E S+    K     I ++      L++  V 
Sbjct: 428 PVDLTELMAEEQGLKIDGPGFEKAKQESYEASKRGGKKGGSDLIKLNVHELNELNEENVA 487

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVV-PGNEVGIVLASSSFYAEQGGQIFDEG- 589
            TDD  K+   ++ +  I  ++ GS F+  +  PG + GI+L  + FYAEQGGQ +D G 
Sbjct: 488 KTDDKAKY-GTENIEGTILKLHDGSNFVNEISEPGKKYGIILDKTCFYAEQGGQEYDTGK 546

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
            +      F V NVQ+Y GFV H GSL E  G+ SVG+++I   D  RR  I  NHT TH
Sbjct: 547 IVIDDVAEFNVENVQLYNGFVFHTGSLEE--GKLSVGDKIIAAYDELRRFPIKNNHTGTH 604

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +LN AL+E LG+ VDQKGS+V PEKLRFDFSH K +  + LR +E I N+QIK  L V+ 
Sbjct: 605 ILNLALKETLGNDVDQKGSLVAPEKLRFDFSHKKALTIDELRDVEKISNQQIKDNLTVYY 664

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
           K+  L  AK I+ +RAVFGE YPDPVRVV++G  V+DLLA+P ++EW   S E CGGTH+
Sbjct: 665 KDVPLDLAKQISSVRAVFGETYPDPVRVVSVGVPVDDLLANPTSEEWHKYSVEFCGGTHV 724

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKN 829
           + T + + F +L E GIAKGIRRI AVT   A++A   A    + +  A ++  S +++ 
Sbjct: 725 NKTSDIKYFVVLEESGIAKGIRRIVAVTGTEAFEAQRIADEFAEALTRAEQLPFSPIKEK 784

Query: 830 QVR------------------------KAQKKVAEENLQKAVKVATETAEA-----AASN 860
           +++                        KA K V +E   +A K   +T +      A + 
Sbjct: 785 KLKELGVQLGQLSISVITKHELKEKFNKADKLVKDEVKSRAKKEIKQTVDEVKNYFAENQ 844

Query: 861 GKPFCISRVEVGLDAAAVREAV-LKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSK 919
              + +  +++  +A A+ EAV       K   + +F+ ++   K  +  G     D   
Sbjct: 845 DAKYFVKFIDIPTNAKAITEAVNFMKTSAKDKSMYLFTGNDPEGK--IAHGCYISDDALS 902

Query: 920 QLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAM 960
           Q    + L   +  + G    GKG +  G G  + +V  A+
Sbjct: 903 QGIEGQTLIKQVSSIVGGKAGGKGNVFQGMGDKSVEVNKAV 943


>gi|312379940|gb|EFR26076.1| hypothetical protein AND_08072 [Anopheles darlingi]
          Length = 975

 Score =  852 bits (2201), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 456/968 (47%), Positives = 602/968 (62%), Gaps = 62/968 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A+++R  F  FF +K H+   SS V+P++DPTLLFANAGMNQ+KPIFLGT DP++++++ 
Sbjct: 13  ASQIRKIFLDFFAEKKHLYVHSSSVIPLDDPTLLFANAGMNQFKPIFLGTVDPSSEMARW 72

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFGDYFK E   WAWELLT+  
Sbjct: 73  VRTANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKREICTWAWELLTERL 132

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
           RLP DRLY TYFGG  ++GL PD E R IW++  +P + VLP   KDNFWEMG+TGPCGP
Sbjct: 133 RLPKDRLYVTYFGGHPESGLEPDLECRSIWIELGIPEAHVLPGSMKDNFWEMGETGPCGP 192

Query: 239 CSEIHYDRTGN-RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFE 297
           CSE+H+DR G  R    LVN DDP  +EIWN+VFIQ+NRE DGSLK LP KH+D G+GFE
Sbjct: 193 CSELHFDRIGGGRSVPELVNQDDPDVLEIWNLVFIQYNREQDGSLKLLPKKHIDCGMGFE 252

Query: 298 RLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTL 357
           RL S++Q+K SNYDTDVF+P+FDAI+  TGA PY G+VGA+D D VDMAYRV+ADH RT+
Sbjct: 253 RLVSVIQDKRSNYDTDVFVPLFDAIRAGTGAPPYGGRVGAEDTDGVDMAYRVLADHARTI 312

Query: 358 SFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELK 417
           + A+ADG  P N GR YVLRRILRRAVRY +E L A+ GFF  LV+ VV+++GD FPE++
Sbjct: 313 TIALADGGFPDNTGRGYVLRRILRRAVRYATEKLNAKPGFFASLVDTVVELLGDTFPEVR 372

Query: 418 QREAHIREIIAAEEASFGKTLLKGIEKFKKA-AQDVQGKVLSGQDAFILWDTYGFPLDLT 476
           +   HI+ +I  EE  F KTL +G     +  A+    KV+ G  A+ L+DTYGFP+DLT
Sbjct: 373 KDPQHIKNVIGEEEQQFLKTLTRGRNLLNRTIAKLGDSKVIPGDVAWRLYDTYGFPVDLT 432

Query: 477 QLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDS 536
           QLMAEE+ + +D+EG+  A  E+   S+  + K     I +D  A + L  + +  TDDS
Sbjct: 433 QLMAEEKEMSIDMEGYERAKHESYLISQ-GKEKSKTATIDLDVHAISELQAKQLAPTDDS 491

Query: 537 FKFIW------------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
            K+ +            F+  +  I A+  G  F+E V  G E G++L  ++FYAE GGQ
Sbjct: 492 TKYRYRAESTDPQAQYVFEGCRGRIVALRFGGAFVEEVTAGQECGVILDKTNFYAESGGQ 551

Query: 585 IFDEGFIEGL---FGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLI 641
           I+D+G++  +      F V  V   GG+V+HIG +    G   VG+EV C +D  RR+L 
Sbjct: 552 IYDQGYLVKVGDESSEFNVSLVYNRGGYVLHIGVV---EGTLRVGDEVDCHLDTVRRQLT 608

Query: 642 APNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQI 701
             NH+ TH LN +L +VLG   DQ+GS+V+PEKLRFDF++   +  E +   E +  E +
Sbjct: 609 MKNHSATHALNHSLLKVLGQDTDQRGSLVVPEKLRFDFTNKAAMTIEQVGEAERLTREVV 668

Query: 702 KAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISA 761
           +  + VF+KE  LA AK I GLR+VF EVYPDPVRV++ G  VE L ADP +   +  S 
Sbjct: 669 RKNVQVFAKETNLAVAKSIRGLRSVFDEVYPDPVRVISFGVPVEQLAADPTSDAGVLNSV 728

Query: 762 ELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDA-SK 820
           E CGGTHL  +     F + SEE IAKGIRRI A+T   A KA +   SLE+EV     K
Sbjct: 729 EFCGGTHLHQSGHMVDFVITSEEAIAKGIRRIVALTGPEALKALQKTESLEQEVRQLREK 788

Query: 821 IEGS-------------LLEKNQ---------VRKAQKKVAEENLQKAVKVATETAEAA- 857
           IE S             ++E  +         V+K + +   +NL+K +      A+AA 
Sbjct: 789 IEASGTVTTGAKEFVRRIVELTEDVSQAVIPYVKKDELRTVLKNLKKTLDDRERAAKAAV 848

Query: 858 -------------ASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVF-STDETTN 903
                        A+   P  + R+E   +  A+  A+ +V +       +F S DE   
Sbjct: 849 SVEVIVRAKELSEANRDAPVLVHRLEAFSNTKALDSALKEVRKINPEQSALFVSVDEDAG 908

Query: 904 KAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLA 963
           K    A VP K    K L+ +EW++  + PL G  G GK   A   G    +    ++LA
Sbjct: 909 KIFCLASVP-KGAVEKGLKANEWIS-HVAPLMGGKGGGKPESAQASGGSWQKADEILELA 966

Query: 964 AEFAAMKL 971
             FA+ KL
Sbjct: 967 RSFASTKL 974


>gi|402224402|gb|EJU04465.1| hypothetical protein DACRYDRAFT_20988 [Dacryopinax sp. DJM-731 SS1]
          Length = 960

 Score =  852 bits (2201), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 470/945 (49%), Positives = 590/945 (62%), Gaps = 45/945 (4%)

Query: 58  WPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLS 117
           WPA KVR TF  +F+ + H  W SS  +P  DPTLLFANAGMNQYK IFLGT DP ++L+
Sbjct: 14  WPADKVRQTFIDYFKARGHTFWPSSSTIPYEDPTLLFANAGMNQYKAIFLGTVDPQSELA 73

Query: 118 KLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTK 177
           KL RA N+QKCIRAGGKHNDL+DVGKDTYHHTFFEMLGNWSFGDYFK EAI+W+WELLT+
Sbjct: 74  KLKRAVNSQKCIRAGGKHNDLEDVGKDTYHHTFFEMLGNWSFGDYFKKEAIQWSWELLTE 133

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPC 236
           VY+LP DRLY TYF GD K GL  D EAR  WL   +P   +L    KDNFWEMG TGPC
Sbjct: 134 VYKLPKDRLYVTYFEGDSKQGLDADLEARQYWLDVGVPEDHILTGDAKDNFWEMGATGPC 193

Query: 237 GPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGF 296
           GPCSEIH+DR G R+AA LVN DDP  IEIWN VFIQFNRE DGSL+ LPAKHVDTG+GF
Sbjct: 194 GPCSEIHFDRLGGRNAAHLVNQDDPNVIEIWNNVFIQFNREEDGSLRELPAKHVDTGMGF 253

Query: 297 ERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRT 356
           ERL S LQ+  SNYDTDVF+PIF  IQ+ TGAR Y+GK+GA+D D +D AYRVVADH+RT
Sbjct: 254 ERLVSCLQDLPSNYDTDVFVPIFAKIQELTGARRYAGKLGAEDVDGIDTAYRVVADHVRT 313

Query: 357 LSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFPE 415
           L+FA++DG  P N GR YVLRRILRR  RY  +      G FF+ L   V++ MG  FPE
Sbjct: 314 LTFALSDGGVPNNVGRGYVLRRILRRGARYVRKKFGVPIGSFFSSLAPTVIQQMGHFFPE 373

Query: 416 LKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTYGFP 472
           + ++ + I+EI+  EE SF +TL +G    E++  A +      L G D + L+DTYGFP
Sbjct: 374 ITRKLSDIKEILDEEEESFSRTLDRGEKLFEEYVTATKKKGSSSLHGHDVWRLYDTYGFP 433

Query: 473 LDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR-GVL 531
           +DLT+LMAEE  L ++   F  A   + E S+++Q K    A+ +D    AAL     V 
Sbjct: 434 VDLTRLMAEELHLTINEHEFEEARLRSLEASKASQKKGNEDAVKLDVHDLAALESNPKVP 493

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNE---VGIVLASSSFYAEQGGQIFDE 588
            TDD  KF    +  + I+AIY    F+ES     E    GI+L  +SFYAE GGQ  D 
Sbjct: 494 KTDDRPKF-GLGNISATIQAIYFNKSFLESTTAIPEDAAFGILLDRTSFYAESGGQENDT 552

Query: 589 G--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
           G   I+G    F V+NVQ+Y G+V+H G+L    G+FSVG+EVI   D  RR  +  NHT
Sbjct: 553 GSIIIDGK-TEFMVQNVQVYNGYVLHSGALK--YGQFSVGDEVISSYDELRRWPLRNNHT 609

Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD 706
            TH+LNFALRE+LGDH+DQKGS+V P KLRFDFSH   V  E + +IE I N  IK ++ 
Sbjct: 610 GTHILNFALREILGDHIDQKGSLVAPTKLRFDFSHKAQVTLEEMEKIEEICNGWIKRDVK 669

Query: 707 VFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGG 766
           VFS+E  L  A+   G+RAVFGE YPDPVRVV++G +V+D++ DP+N +W   S E CGG
Sbjct: 670 VFSQEVDLHTAQEFAGVRAVFGEAYPDPVRVVSLGYEVQDIIQDPQNPKWRGTSIEFCGG 729

Query: 767 THLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLE-----------KEV 815
           TH++ T + +A  L  E GIAKGIRRI AVT   A +    A S E           KE 
Sbjct: 730 THVAKTGDIKALVLTEESGIAKGIRRIIAVTGEEANEVNRLADSFETRLIQIERSAGKEK 789

Query: 816 DDASK---IEGSLLEKNQVRKAQKKVAEENLQKA------VKVATETAEAAASNGKPFCI 866
           D A K    E    + + +RKA  +     ++K         +A+ T E   +  K F  
Sbjct: 790 DAALKAYTFELGQADISALRKAALREKFAGIRKTFDDANKAHLASLTKELTKTIDKHFQE 849

Query: 867 SRVE----VGLDAAAVREAVLKVIEQKGMP----VMVFSTDETTNKAVVCAGVPEKSDQS 918
              E      +D+      +++ I Q        V +FS D +  K      +P K   +
Sbjct: 850 KPNESVYLANIDSLEGNTKIMQSIVQHARTLNKAVYIFSVDVSAGKVAHVNFLP-KHAIT 908

Query: 919 KQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLA 963
           +      W  A    L G+ G GK  +A G G +  +V  A+ LA
Sbjct: 909 QSFSAKTWANAVSVILGGKAG-GKDDVAQGVGVNVEKVDEALQLA 952


>gi|225683316|gb|EEH21600.1| alanyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
          Length = 962

 Score =  851 bits (2199), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 465/959 (48%), Positives = 610/959 (63%), Gaps = 62/959 (6%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           EWPA +VR+ F  FF+D  H    SS VVP++DPTLLFANAGMNQYK IFLGT +PN+  
Sbjct: 11  EWPALRVRNAFLDFFKDNGHTFVPSSSVVPLSDPTLLFANAGMNQYKAIFLGTVEPNSDF 70

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
           ++L RA NTQKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK EAI ++W+LLT
Sbjct: 71  AQLKRAHNTQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIRYSWDLLT 130

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
           KVY L  DRLY TYF G+  AG+ PD EARD+WL   +    +L    KDNFWEMG+ GP
Sbjct: 131 KVYGLDPDRLYVTYFEGNPDAGIEPDLEARDLWLSVGVAEDHLLSGNMKDNFWEMGEQGP 190

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPCSEIHYDR G R+A+ LVN DDP  +EIWN VFIQ+NRE D SL+PLP KHVDTG+G
Sbjct: 191 CGPCSEIHYDRIGGRNASHLVNQDDPNVLEIWNNVFIQYNREQDKSLRPLPNKHVDTGMG 250

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
           +ERL SILQNK SNYDTDVF P+F+ I++ TG+RPY+GK   +D D VD AYRVVADHIR
Sbjct: 251 YERLVSILQNKTSNYDTDVFTPLFEKIREITGSRPYTGKFHEEDVDGVDTAYRVVADHIR 310

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQ-DGFFNGLVNIVVKVMGDVFP 414
           TL+FAI+DG+ P NEGR YV+RR+LRR  RY  + L  +  GFF+ +V  +V+ MGD+FP
Sbjct: 311 TLTFAISDGAVPNNEGRGYVVRRVLRRGARYARKYLNVEIGGFFSQIVPTLVEQMGDMFP 370

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK---VLSGQDAFILWDTYGF 471
           E+K++   + EI+  EE SF KTL +G   F++ A   + K    L G D + L+DT+GF
Sbjct: 371 EIKRKATDVMEILDEEEISFAKTLDRGERLFEEYALQAKQKGLDRLHGADVWRLYDTFGF 430

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           P+DLTQLMAEERGL +D    N   +EAR R++ A   Q  G +  D      +H  G+L
Sbjct: 431 PVDLTQLMAEERGLKID----NGEFEEARLRAKEASKGQ--GKLTKDV-VKLTVHDLGLL 483

Query: 532 -------ATDDSFKFIWFQDHKSVIKAIYTGSEFIES---VVPGNEVGIVLASSSFYAEQ 581
                   TDDS KF    +  S IKAIY   +F++S   +  G + GI+L  ++FYAEQ
Sbjct: 484 ETMDDVPKTDDSAKF-GRGNITSQIKAIYHNKKFVDSSKGIPEGEQFGIILDRTNFYAEQ 542

Query: 582 GGQIFDEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRK 639
           GGQ +D G   I+G      V +VQ+YGG+V+H G +  G+  F+V + VI + D  RR 
Sbjct: 543 GGQEYDTGKIIIDGK-AELAVEDVQVYGGYVLHTGFMKYGS--FNVNDSVIAEYDELRRW 599

Query: 640 LIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNE 699
            I  NHT TH+LNFALR+VLGD V+QKGS+V  EKLRFDFSH   V    L  IE I  +
Sbjct: 600 PIRNNHTGTHILNFALRKVLGDGVEQKGSLVAAEKLRFDFSHKSAVSDSDLEEIERISTD 659

Query: 700 QIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSI 759
            I+    V+ K+  L+ A+ I G+RAVFGE YPDPVRVV++G ++E++L D  +  W  I
Sbjct: 660 YIRQNCAVYGKDVPLSIAREITGVRAVFGETYPDPVRVVSVGVELEEILKDVHDPRWKEI 719

Query: 760 SAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAY-------------KAFE 806
           S E CGGTH+  T + +   +L E GIAKGIRRI AVT   A+             K FE
Sbjct: 720 SIEFCGGTHVQKTGDIKDLVILEESGIAKGIRRIIAVTGEEAHEVQRIAKEFGERLKRFE 779

Query: 807 AA-CSLEKEVD------DASKIEGSLLEKNQVR-----------KAQKKVAEENLQKAVK 848
                 +KE++      D +++  S +EK Q R           + QK   +   +KA+ 
Sbjct: 780 KMELGPKKEMEAKLLQVDLNQLTISSVEKAQFREKFTQIHKKVLEGQKAAQKLESKKALD 839

Query: 849 VATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKV-IEQKGMPVMVFSTDETTNKAVV 907
                 +A  +N  P  + ++ +  +A AV +++  V  + +   + VF+ D+   K V 
Sbjct: 840 AIMGYFQAPENNDAPHLVLQLPISANAKAVSDSLNFVKTKMQDKSLYVFAADKEAGKIVH 899

Query: 908 CAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEF 966
              V E   Q +    ++W  +    + GR G GKG ++ G GTDA ++  A+  A E+
Sbjct: 900 GCHVAENLSQ-QGASPNDWANSVANVVGGRAG-GKGPISIGNGTDAEKLDDAIKAATEY 956


>gi|355666148|gb|AER93439.1| alanyl-tRNA synthetase [Mustela putorius furo]
          Length = 841

 Score =  851 bits (2199), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 426/775 (54%), Positives = 538/775 (69%), Gaps = 26/775 (3%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A+++R  F  FF+   H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  ++KL
Sbjct: 7   ASEIRQRFIDFFKRNEHTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A + A ELLT+ +
Sbjct: 67  SRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +P +RLY TYFGGDE AGL PD E + IW    L  S++LP   KDNFWEMGDTGPCGP
Sbjct: 127 GIPVERLYVTYFGGDEAAGLEPDLECKQIWQNLGLDDSKILPGNMKDNFWEMGDTGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G RDAA LVN DDP  +EIWN+VFIQ+NRESDG LKPLP K +DTG+G ER
Sbjct: 187 CSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNRESDGILKPLPKKSIDTGMGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+F+P F+AIQ+ TGARPYSGKVGADDAD +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYSGKVGADDADGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY  E L A  GFF  LV++VV+ +GD FPELK+
Sbjct: 307 VALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRGFFATLVDVVVQSLGDAFPELKK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
               +++II  EE  F KTL +G     +  Q +   K + G  A++L+DTYGFP+DLT 
Sbjct: 367 DPDMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDCKTIPGDTAWLLYDTYGFPVDLTG 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
           L+AEE+GL+VD++GF      A+ +S   Q K AGG   I++D  A   L ++G+ ATDD
Sbjct: 427 LIAEEKGLVVDMDGFEEERKLAQLKS---QGKGAGGEDLIMLDIYAIEELREKGLEATDD 483

Query: 536 SFKFIWFQDHK---------SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           S K+ +  D           + + A+     F+E V  G E G+VL  + FYAEQGGQI+
Sbjct: 484 SPKYNYHSDSSGSYAFESAVATVMALRRDKMFVEEVCTGQECGVVLDKTCFYAEQGGQIY 543

Query: 587 DEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           DEG++  +  +      F V+N Q+ GG+V+HIG++    G   VG++V   +D  RR+ 
Sbjct: 544 DEGYLVKVEDNSEDKTEFTVKNAQVRGGYVLHIGTVY---GSLRVGDQVRLFIDEPRRRP 600

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           I  NHT TH+LNFALR VLG+  DQ+GS+V P++LRFDF+    +  + +++ E I N+ 
Sbjct: 601 IMSNHTATHILNFALRSVLGE-ADQRGSLVAPDRLRFDFTAKGAMSTQQIKKAEEIANQM 659

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I+A   V++++  LA AK I GLRAVF E YPDPVRVV+IG  V +LL DP        S
Sbjct: 660 IEAAKPVYTQDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTS 719

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV 815
            E CGGTHL N+  A  F ++SEE IAKGIRRI AVT   A KA   A SL+  +
Sbjct: 720 IEFCGGTHLRNSSHAGTFVIVSEEAIAKGIRRIVAVTGAEAQKALRKAESLKNSL 774


>gi|340370458|ref|XP_003383763.1| PREDICTED: alanyl-tRNA synthetase, cytoplasmic-like isoform 2
           [Amphimedon queenslandica]
          Length = 966

 Score =  851 bits (2198), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 451/963 (46%), Positives = 607/963 (63%), Gaps = 62/963 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A  +R  F  FF  K+H    SS  +PV+DPTLLF NAGMNQ+KPIF GT DP++  + L
Sbjct: 7   AKDIRRMFIDFFRSKDHTFVPSSSTIPVDDPTLLFTNAGMNQFKPIFQGTVDPSSDFATL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA N+QKCIRAGGKHNDLDDVGKDTYHHTFFEM+GNWSFGDYFK EAI+ AW  LT+  
Sbjct: 67  SRAANSQKCIRAGGKHNDLDDVGKDTYHHTFFEMMGNWSFGDYFKEEAIKMAWSFLTESL 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
           +LP DRLY TYFGGDEK  L  D+E ++IWL   LP  RVLPF  KDNFWEMG+ GPCGP
Sbjct: 127 KLPKDRLYVTYFGGDEKLKLPADDECKEIWLNTGLPPERVLPFSVKDNFWEMGEVGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G R  A  VN DDP  +E+WN+VF+QFN+ESDGS+KPLP  +VDTGLG ER
Sbjct: 187 CSEIHYDRIGGRFVADRVNMDDPNVLELWNVVFMQFNKESDGSIKPLPKNNVDTGLGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           + S++Q K SNYDTD+F+PIFDAI+  TG+R Y+GK+GA+D D VDMAYRVVADHIRTL+
Sbjct: 247 IVSVVQGKFSNYDTDLFLPIFDAIEAKTGSRSYTGKIGAEDVDGVDMAYRVVADHIRTLT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            AI+DG  P   GR YVLRRILRR VRY +E L A+ G F  LV  V+ V+G+ FPE+ +
Sbjct: 307 IAISDGGKPDATGRGYVLRRILRRGVRYITEKLNAKPGTFASLVPTVLDVLGEAFPEITK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQL 478
               + + I  EE  F KTL  G   F++  + ++  +L G  A+ L+DTYGFP+DLTQL
Sbjct: 367 DPEMVMDTINEEEKQFLKTLSHGKRMFERKLRKIENNLLPGDVAWRLYDTYGFPVDLTQL 426

Query: 479 MAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSFK 538
           MAEER + VD+EG+  A   A+ R    Q      ++ +D  A + L  +GV  T+DS K
Sbjct: 427 MAEERQVTVDMEGYEKAKAMAQVREEE-QLIIIDESLQLDVHAISHLQSKGVPPTNDSSK 485

Query: 539 FIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEG 589
           + +         FQ  +  + A+    EF++ V  G  VG++   + FYAEQGGQI+DEG
Sbjct: 486 YDYSSDESGNYKFQSCEGSVIALRYNKEFVDEVSSGQVVGVLTDKTCFYAEQGGQIYDEG 545

Query: 590 FIEGLF---GSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
           +I  +      F VR+VQ+ GG+V+H+GS+    G   VG++V   +D DRR  +  NHT
Sbjct: 546 YIVKIGEEETEFIVRDVQVRGGYVLHVGSI---EGTLRVGDKVNMTIDGDRRSDVMKNHT 602

Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD 706
            TH+LNFALR V+G+  DQKGS+V P++LRFDFS    +  + +++ E +  E IKA   
Sbjct: 603 GTHVLNFALRRVIGE-ADQKGSLVAPDRLRFDFSAKGAMKTDQIKKCEEVALEVIKASHP 661

Query: 707 VFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGG 766
           V+++E  L  AK I GLRAVF EVYPDPVRV++IG  V+ L+ DP     ++ S E CGG
Sbjct: 662 VYAQETPLPVAKEIQGLRAVFDEVYPDPVRVLSIGVPVDKLVEDPSGPWAINYSVEFCGG 721

Query: 767 THLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVD---------- 816
           THL ++   ++FA+++EE IAKGIRRI A+T   A KA + A  +++ VD          
Sbjct: 722 THLRSSGHIQSFAIVTEEAIAKGIRRIVALTGMEAVKAHKRAAVIQERVDALCSTVLNGL 781

Query: 817 --------DASKI---EGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFC 865
                   +A+K+   EG  L    + +  K    E L  A K A E  +AA       C
Sbjct: 782 STKSMAPKEANKLIVKEGDALSSAVISQWIKDELREKLNTAKKSADEADKAAKELLTQKC 841

Query: 866 ISRVE--VG-LDAAAVREAVLKVIEQKGMP------------------VMVFSTDETTNK 904
           I R +  +G  D A+    V+++ E +G+                    ++ S D   +K
Sbjct: 842 IERAQELIGQFDKASPPSFVVEIFEAEGLSKALDNALKQFKSLAPTVAALLLSVDHDNHK 901

Query: 905 AVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAA 964
            +  + VP K+  +K L+ +EW+ A    + G+ G G+   A   GT+  +++ A+++A 
Sbjct: 902 ILCLSNVP-KNAIAKGLKANEWVQAVSVTIGGKGG-GRDNTAQATGTNVGKLSDAVEVAK 959

Query: 965 EFA 967
           +FA
Sbjct: 960 QFA 962


>gi|392597601|gb|EIW86923.1| hypothetical protein CONPUDRAFT_115791 [Coniophora puteana
           RWD-64-598 SS2]
          Length = 953

 Score =  850 bits (2197), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 465/950 (48%), Positives = 605/950 (63%), Gaps = 54/950 (5%)

Query: 58  WPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLS 117
           W A  VR  FF FF  K+H    SS  +P +DPTLLFANAGMNQYK IFLGT DPN++  
Sbjct: 9   WTARNVRQAFFDFFTSKDHTFVPSSSTIPYDDPTLLFANAGMNQYKSIFLGTVDPNSERG 68

Query: 118 KLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTK 177
           KL RA N+QKCIRAGGKHNDL+DVGKD+YHHTFFEMLGNWSFGDYFK EAI ++WE LTK
Sbjct: 69  KLRRAFNSQKCIRAGGKHNDLEDVGKDSYHHTFFEMLGNWSFGDYFKKEAITYSWEALTK 128

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWL-KFLPASRVLPFGCKDNFWEMGDTGPC 236
           VY LP +RLY TY+ GD KAG+  D +A+  WL + +  S VLP     NFWEMG TGPC
Sbjct: 129 VYGLPKERLYVTYYAGDPKAGIPADEDAKRYWLEQGVDPSHVLP--STGNFWEMGATGPC 186

Query: 237 GPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGF 296
           GPCSEIH+DR G RD A LV+ DDPT IEIWN VFIQFNRE DGSL+ LP+KH+DTG+GF
Sbjct: 187 GPCSEIHFDRIGGRDVAHLVDGDDPTVIEIWNNVFIQFNREEDGSLRSLPSKHIDTGMGF 246

Query: 297 ERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRT 356
           ERL SILQ+K SNYDTDVF P+FD IQ+ TGARPY+GK G +DAD VD AYRVVADH+RT
Sbjct: 247 ERLVSILQDKRSNYDTDVFTPLFDKIQELTGARPYAGKFGDEDADGVDTAYRVVADHVRT 306

Query: 357 LSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFPE 415
           L+FA++DG  P N GR YVLRR+LRR  R+  + L A  G FF+ L+ +VV+ MGD FPE
Sbjct: 307 LAFALSDGGVPNNVGRGYVLRRVLRRGSRFVRKKLNAPIGSFFSSLLPVVVETMGDAFPE 366

Query: 416 LKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTYGFP 472
           L +++  I+EI+  EE SF +TL +G    E++   A++   K L G D + L+DTYGFP
Sbjct: 367 LTKKQDEIKEILDEEEESFSRTLDRGEKLFEQYATKAKEQGLKELHGGDIWRLYDTYGFP 426

Query: 473 LDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL- 531
           +DLT+LMAEE GL ++ + F  A + ++E S+ +  K  G A+ +D    AAL     + 
Sbjct: 427 VDLTRLMAEEHGLSINEKQFEEAQEASKEASKGSFKKDKGAAVKLDVHDLAALDANDAIP 486

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESV--VP-GNEVGIVLASSSFYAEQGGQIFDE 588
            T+DSFKF    +  +++K IY   +F+ S   +P G   G++L  +SFYAE GGQ  D 
Sbjct: 487 KTNDSFKF-QLGNINAIVKGIYHDKQFLSSTSNIPEGATFGVLLDRTSFYAEAGGQENDT 545

Query: 589 G--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
           G   I+G+   F V NVQ Y G+V+H G L    G+ + G++VI   D  RR  +  NHT
Sbjct: 546 GNIVIDGV-ADFEVTNVQSYSGYVLHTGHLK--YGQLNAGDDVISSYDELRRWPLRSNHT 602

Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD 706
            TH+LN+ALREVLGDH+DQKGS+V P KLRFDFSH   +  + L++IE+I  + IK  + 
Sbjct: 603 ATHILNYALREVLGDHIDQKGSLVAPTKLRFDFSHKAQIGLKELQQIETISIDWIKKNVK 662

Query: 707 VFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGG 766
           V++K+ TL EA  I G+RAVFGE YPDPVRVV +G  V+++  + EN +W   S E CGG
Sbjct: 663 VYTKDLTLEEAYKIPGVRAVFGEAYPDPVRVVVLGYDVDEIARNVENPQWRKTSIEFCGG 722

Query: 767 THLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEG--- 823
           TH++ T + + F ++ E GIAKGIRRI AVT   A +A   A SL+  +D+  +  G   
Sbjct: 723 THVAKTGDIKEFVIIEESGIAKGIRRIIAVTGQEAQEASRIASSLKTRLDELERSSGKEK 782

Query: 824 ----------------SLLEKNQ-------VRKAQKKVAEE-----NLQKAVKVATETAE 855
                           S+L K +       VRKA  K  +E     N +    +A    E
Sbjct: 783 DAGLKALTVELGQADISVLLKAELKDRLASVRKALDKQIKEKETALNKEALNALAKHFEE 842

Query: 856 AAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKS 915
              S G     + +EV  +A  ++  V++  ++   P  VFS D    K      VPE +
Sbjct: 843 NPNSEG---YFAAIEVDGNAKILQNIVMQA-KKLNKPAYVFSVDPERTKVAHANFVPEGA 898

Query: 916 DQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAE 965
            +SK      W +   + + G+ G GK   A G G +  +V  A+ LA E
Sbjct: 899 -RSKGFTAKGWASKIGEVIGGKAG-GKDESAQGVGANVDKVAEAVVLAKE 946


>gi|452842093|gb|EME44029.1| hypothetical protein DOTSEDRAFT_44310 [Dothistroma septosporum
           NZE10]
          Length = 960

 Score =  850 bits (2197), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 475/964 (49%), Positives = 608/964 (63%), Gaps = 52/964 (5%)

Query: 45  VAAMPGADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKP 104
           +A+  G +P   EW A KVR TF  +F+   H    SS VVP++DPTLLF NAGMNQYK 
Sbjct: 1   MASTTGHEP---EWTAQKVRSTFIDYFKQHGHTFVPSSSVVPLSDPTLLFTNAGMNQYKS 57

Query: 105 IFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK 164
           IFLGT DPN+  +KL RA NTQKCIRAGGKHNDLDDVGKD+YHHTFFEM+GNWSFGDYFK
Sbjct: 58  IFLGTVDPNSDFAKLKRAANTQKCIRAGGKHNDLDDVGKDSYHHTFFEMMGNWSFGDYFK 117

Query: 165 NEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGC 223
            EAI ++WELLTKVY L  +RLY TYF G    GL PDNEARD+W    +    +L    
Sbjct: 118 KEAINFSWELLTKVYGLDPNRLYVTYFEGKTDVGLEPDNEARDLWKSVGVADDHILTGDM 177

Query: 224 KDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLK 283
           KDNFWEMGD GPCGPCSEIHYDR G R+AA LVN DDP  +EIWN VFIQ+NRE D SLK
Sbjct: 178 KDNFWEMGDQGPCGPCSEIHYDRIGGRNAAHLVNQDDPNVLEIWNNVFIQYNREPDRSLK 237

Query: 284 PLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKV 343
            LPAKHVDTG+G+ERL S+LQNKMSNYDTDVF P+F  IQ+ TG R Y GK G DDAD +
Sbjct: 238 SLPAKHVDTGMGYERLVSVLQNKMSNYDTDVFSPLFARIQEVTGVREYQGKFGEDDADGI 297

Query: 344 DMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLV 402
           D AYRVVADH+R L+FAI+DG+ P N GR YV+RR+LRR  RY  +    + G FF+ +V
Sbjct: 298 DTAYRVVADHVRLLTFAISDGAPPSNVGRGYVVRRVLRRGARYARKYFNVEIGSFFSKIV 357

Query: 403 NIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSG 459
             +V+ +GD+FPE+K+++A + E +  EE SF KTL +G    EK+ +A++    K ++G
Sbjct: 358 PTLVEQVGDMFPEIKKKQAEVTETLDEEEVSFAKTLDRGEAMFEKYAQASKTKGSKDIAG 417

Query: 460 QDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDA 519
            D F L+DTYGFP+DLT+LMAEERGL +D E    A  + ++ S+ A+ + A    +   
Sbjct: 418 ADVFRLYDTYGFPVDLTKLMAEERGLDIDEEAVAEAEKKHQKASKGAKKEGADYPKLTVH 477

Query: 520 DATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESV--VP-GNEVGIVLASSS 576
           D  A  +   V  T+D  KF    +  + IKAIY    F++S   VP G + G+VL  ++
Sbjct: 478 DINALENMPDVPKTNDDAKFAK-GNISATIKAIYHKGNFLQSTKEVPEGEQFGVVLDKTN 536

Query: 577 FYAEQGGQIFDEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVD 634
           FYAEQGGQ  D G   I+G      V+NVQ Y GFV+H G + EG    +VG EV+C+  
Sbjct: 537 FYAEQGGQENDAGSLLIDGE-AEIDVQNVQSYAGFVLHTGYMKEGV--LNVGSEVLCQYS 593

Query: 635 YDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIE 694
            +RR+ I  NHT TH+LNFALREVLGD ++QKGS+V PEKLRFDFSH        + +IE
Sbjct: 594 EERRQPIRNNHTGTHILNFALREVLGDDINQKGSLVAPEKLRFDFSHKSGCSDAEISQIE 653

Query: 695 SIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENK 754
                 I+   +V+SKE  LA A+ I G+RAVFGE YPDPVRVV+IG  VEDLL DP  K
Sbjct: 654 EKSTSYIRQNSEVYSKEVPLATARQIEGVRAVFGETYPDPVRVVSIGVPVEDLLEDPPRK 713

Query: 755 EWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAF-------EA 807
           +W S+S E CGGTH+ NT E +   ++ E GIAKGIRRI AVT   A+K         ++
Sbjct: 714 DWRSVSVEFCGGTHVKNTSEIKDLIVVEESGIAKGIRRIIAVTGRTAHKLQRDTEEWGKS 773

Query: 808 ACSLEK-----EVDDASKIEGSLLE--------KNQVRKAQKKVAEENL--QKAVKVATE 852
              LEK     E +  +K++   L         KNQ R    KV ++NL  QK  + A  
Sbjct: 774 ISELEKMTFGPEKEQRTKVDQQRLNAEELPAVAKNQFRDRLGKVVKDNLDHQKTAQKAEN 833

Query: 853 TAEAAASN--------GKPFCISRVEVGLDAAAVREAVLKVI--EQKGMPVMVFSTDETT 902
                A N         K   +S   +     AV+E + KVI  +QK   V +    +  
Sbjct: 834 KRVLDAVNEHFEKNKENKTLVLSVPGLSSGTKAVQETI-KVISSKQKDKTVYLLGAVDAD 892

Query: 903 NKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDL 962
            K V    V  ++ Q K  + ++W +  +  + G    GKG  + GQG +  +V  A++ 
Sbjct: 893 GKIVHGCHVSSEA-QGKGADAAKW-SGEVATVVGGKAGGKGATSLGQGMNVDKVNDAVET 950

Query: 963 AAEF 966
           A ++
Sbjct: 951 ARKY 954


>gi|432114146|gb|ELK36179.1| Alanyl-tRNA synthetase, cytoplasmic [Myotis davidii]
          Length = 991

 Score =  850 bits (2196), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 465/976 (47%), Positives = 616/976 (63%), Gaps = 73/976 (7%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A+++R  F  FF+   +    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  ++KL
Sbjct: 20  ASEIRQRFIDFFKRNENTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKL 79

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A + A ELLT+ +
Sbjct: 80  SRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQEF 139

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +P +RLY TYFGGDE AGL PD E + IW    +  +++LP   KDNFWEMGDTGPCGP
Sbjct: 140 GIPVERLYVTYFGGDEAAGLEPDLECKQIWQNLGVDDTKILPGNMKDNFWEMGDTGPCGP 199

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G RDAA LVN DDP  +EIWN+VFIQ+NRE+DG+LKPLP K +DTG+G ER
Sbjct: 200 CSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNRETDGTLKPLPKKSIDTGMGLER 259

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+F+P F+AIQ+ TGARPY+GKVGADDAD +DMAYRV+ADH RT++
Sbjct: 260 LVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGADDADGIDMAYRVLADHARTIT 319

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY  E L A  GFF  LV++VV+ +GD FPELK+
Sbjct: 320 VALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASKGFFATLVDVVVQSLGDAFPELKK 379

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
               +++II  EE  F KTL +G     +  Q +   K + G  A++L+DTYGFP+DLT 
Sbjct: 380 DPDMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTG 439

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
           L+AEE+GL+VD++GF      A+ +S   Q K AGG   I++D  A   L  + + ATDD
Sbjct: 440 LIAEEKGLVVDMDGFEEERKLAQLKS---QGKGAGGEDHIMLDIYAIEELRGKSLEATDD 496

Query: 536 SFKFIWFQDHK---------SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           S K+ +  D           + + A+     F+E V  G E G+VL  + FYAEQGGQI+
Sbjct: 497 SPKYSYLSDSTGSYAFESTVATVMALRRDKMFVEEVSTGQECGVVLDKTCFYAEQGGQIY 556

Query: 587 DEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           DEG++  +  S      F V+N Q+ GG+V+HIG++    G   VG++V   +D  RR+ 
Sbjct: 557 DEGYLVKVDDSSEDKTEFTVKNTQVRGGYVLHIGTIY---GNLKVGDQVRLFIDEPRRRP 613

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           +  NHT TH+LNFALR VLG+  DQ+GS+V P++LRFDF+    +  + +++ E IVNE 
Sbjct: 614 VMSNHTATHILNFALRSVLGE-ADQRGSLVAPDRLRFDFTAKGAMSTQQIKKAEQIVNEM 672

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I+A   V++++  LA AK I GLRAVF E YPDPVRVV++G  V +LL DP        S
Sbjct: 673 IEAAKPVYTQDCPLAAAKAIQGLRAVFDETYPDPVRVVSVGVPVSELLDDPSGPAGSLTS 732

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEK------- 813
            E CGGTHL N+  A AF ++SEE IAKGIRRI AVT   A KA   A SL+K       
Sbjct: 733 VEFCGGTHLQNSSHAGAFVIVSEEAIAKGIRRIVAVTGAEAQKALRKAESLKKSLSVMEA 792

Query: 814 --------------EVDDASKIEGSLL----EKNQVRKAQKKVAE--ENLQKAVK----- 848
                         E+ D  +   + +    +K++ R+  K + +  ++L +A K     
Sbjct: 793 KVKAQTSPNKDVQREIADLGEALATAVIPQWQKDEFRETLKSLKKIMDDLDRASKADVQK 852

Query: 849 -VATETAEAAASN-GKPFCISRVEVGLDAAAVR---------EAVLKVIEQKG--MPVMV 895
            V  +T +   SN  +P  I  +E G  A A +            LK+ +        M+
Sbjct: 853 RVLEKTKQLIDSNPNQPLVILEMESGASAKATQGQGSRGWALNEALKLFKTHSPQTSAML 912

Query: 896 FSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQ 955
           F+ D    K      VP+ +  ++ L+ SEW+      + G+ G GK   A   G +   
Sbjct: 913 FTVDNEAGKITCLCQVPQNA-ANRGLKASEWVQQVSGLMDGK-GGGKDVSAQATGKNVGC 970

Query: 956 VTPAMDLAAEFAAMKL 971
           +  A+ LA  FA ++L
Sbjct: 971 LQEALQLATSFAQLRL 986


>gi|326477176|gb|EGE01186.1| alanyl-tRNA synthetase [Trichophyton equinum CBS 127.97]
          Length = 963

 Score =  850 bits (2195), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 480/965 (49%), Positives = 628/965 (65%), Gaps = 49/965 (5%)

Query: 42  ASAVAAMPGADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQ 101
           A++ ++ P A  + VEWPA +VRDTF  +F+   H    SS VVP++DPTLLFANAGMNQ
Sbjct: 2   AASTSSQPPAGQETVEWPALRVRDTFLDYFKKNGHTFVPSSSVVPLSDPTLLFANAGMNQ 61

Query: 102 YKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGD 161
           YK IFLGT DPN+  ++L RA N+QKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGD
Sbjct: 62  YKSIFLGTVDPNSDFAQLKRAHNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGD 121

Query: 162 YFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLP 220
           YFK EAI+++WELLTKVY L  DRLY TYF G+E AG+ PD EARDIW    +    +L 
Sbjct: 122 YFKKEAIQFSWELLTKVYGLDPDRLYVTYFEGNEAAGVGPDIEARDIWRSVGVKDDHILT 181

Query: 221 FGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDG 280
              KDNFWEMGD GPCGPCSEIHYDR G R+AA LVN DDP  +EIWN VFIQ+NRE D 
Sbjct: 182 GDMKDNFWEMGDQGPCGPCSEIHYDRIGGRNAAHLVNQDDPDVLEIWNNVFIQYNREPDR 241

Query: 281 SLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDA 340
           SL+PLP +HVDTGLG+ERL SILQNK SNYDTDVF P+F AIQ  TGARPY+GK GA+DA
Sbjct: 242 SLRPLPNQHVDTGLGYERLVSILQNKSSNYDTDVFSPLFTAIQNITGARPYTGKFGAEDA 301

Query: 341 DKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFN 399
           D +D AYRVVADH+RTL+FAI DG+ P NEGR YV+RR+LRR VRY  + L+ + G FF+
Sbjct: 302 DGIDTAYRVVADHLRTLTFAITDGAAPNNEGRGYVVRRVLRRGVRYARKYLQVEIGSFFS 361

Query: 400 GLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQ---DVQGKV 456
            LV  +V+ MGD+FPE+K+++  + EI+  EE SF KTL +G  +F+  AQ   D     
Sbjct: 362 KLVPALVEQMGDMFPEIKRKQTDVMEILDEEEVSFAKTLDRGERQFENYAQQALDSGAGK 421

Query: 457 LSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIV 516
           L G D + L+DT+GFP+DLT+LMAEER L +D   F  A  +A+E S+  Q K A   + 
Sbjct: 422 LHGADVWRLYDTFGFPVDLTRLMAEERQLTIDDAEFEEARLKAKEASK-GQAKTASDLLK 480

Query: 517 MDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESV--VPGNE-VGIVLA 573
           +     + L K GV  T+D  KF    +  + IKAI  G E I+S   +P NE +GI+L 
Sbjct: 481 LTVHTLSTLEKNGVPKTNDDAKF-GKGNIVANIKAICHGKEVIDSTKDIPANEQIGIILD 539

Query: 574 SSSFYAEQGGQIFDEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVIC 631
            ++FYAEQGGQ +D G   I+G      V+NVQ+YGG+V+H G +    G FSV + VI 
Sbjct: 540 KTNFYAEQGGQEYDTGKIVIDGQ-AELDVQNVQMYGGYVLHTGFIK--YGNFSVNDSVIA 596

Query: 632 KVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLR 691
           + D  RR  I  NHT TH+LNFALREVLGD VDQKGS+V  EKLRFDFSH   +    L 
Sbjct: 597 EYDELRRWPIRNNHTGTHILNFALREVLGDGVDQKGSLVAAEKLRFDFSHKSAISDSDLE 656

Query: 692 RIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADP 751
           +IE+   + I+    V+S+E  LA A+ I G+RAVFGE YPDPVRVV++G +++++L + 
Sbjct: 657 KIEAKSTDYIRQNCAVYSQEVPLATAREITGVRAVFGETYPDPVRVVSVGVELDEILKNV 716

Query: 752 ENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSL 811
           ++  W  +S E CGGTH+  T + +   +L E GIAKGIRRI AVT   A++    A   
Sbjct: 717 KDPRWEGVSIEFCGGTHVQKTGDIKDLVILEESGIAKGIRRIIAVTGEDAHEVQRIAREF 776

Query: 812 EKEVD--------------------DASKIEGSLLEK----NQVRKAQKKV--AEENLQK 845
            + ++                    D +++  S +EK    NQ  +  KK+  A++  QK
Sbjct: 777 GERLNRFEKMSAGPERDAEIKSLQVDLNQLTISAVEKTKYRNQFTQIHKKITDAQKAAQK 836

Query: 846 A-VKVATETAEAAASNGK--PFCISRVEVGLDAAAVREAVLKV-IEQKGMPVMVFSTDET 901
           A VK A +   A     K  P  + ++ +  +  A+ E++  V  +  G  + VF+ D T
Sbjct: 837 AEVKTAIDAISAYFEENKDSPSLVIKLPITANQKAISESLNHVKTKLSGKALYVFAAD-T 895

Query: 902 TNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMD 961
           +  A  C   P+ +  +K    +EW +A    + G+ G GK  +A G GT+  +V  A+D
Sbjct: 896 SKVAHGCYVTPDLT--TKGASANEWASAVSSIVGGKAG-GKAPVAIGNGTEVNKVDEALD 952

Query: 962 LAAEF 966
            A ++
Sbjct: 953 EATKY 957


>gi|328781428|ref|XP_395392.3| PREDICTED: alanyl-tRNA synthetase, cytoplasmic-like [Apis
           mellifera]
          Length = 1194

 Score =  850 bits (2195), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 452/967 (46%), Positives = 601/967 (62%), Gaps = 61/967 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R  +  FF+ K H    SS  +P +DPTLLF NAGMNQ+KPIFLG  DPN+ ++KL
Sbjct: 7   AKQIRQAYIDFFKSKGHEYVHSSSTIPHDDPTLLFTNAGMNQFKPIFLGIVDPNSDMAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            RA N+QKCIRAGGKHNDLDDVGKD YHHTFFEM+GNWSFGDYFK E   WAWE LT   
Sbjct: 67  VRAVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMMGNWSFGDYFKKEICTWAWEFLTVKL 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
           +L +DRLY TYFGGDEK  L PD E + IWL   L  + VLP   KDNFWEMG+TGPCGP
Sbjct: 127 KLSSDRLYVTYFGGDEKNNLKPDEECKQIWLSLGLSPTHVLPGNMKDNFWEMGETGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
            SEIHYDR GNR+AA LVN DDP  +EIWN+VFIQFNRE+DG+LK LP KH+D GLG ER
Sbjct: 187 SSEIHYDRIGNREAAHLVNQDDPDVLEIWNLVFIQFNRENDGNLKLLPKKHIDCGLGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L SI+QNK +NYDTD+FMP+FDAIQ+ T A  Y GKVG +D + +DMAYRV+ADH RT++
Sbjct: 247 LVSIIQNKSANYDTDLFMPLFDAIQKGTKAPSYQGKVGKEDINGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY  E L A+ GFF  LVN+VV ++GDVFPE+ +
Sbjct: 307 IALADGGVPDNTGRGYVLRRILRRAVRYAIEKLNAKPGFFGSLVNVVVDLLGDVFPEVTK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ-GKVLSGQDAFILWDTYGFPLDLTQ 477
              HI +II  EE  F KTL +G     +    ++   +L G  A+ L+DTYGFP DLTQ
Sbjct: 367 DPQHIIDIINEEETQFLKTLSRGRNLLNRTIVKLESSNILPGDVAWRLYDTYGFPFDLTQ 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSF 537
           LMAEE+GL VD+ G+  A  EA+  S++ ++ +    I +D  A   L    +  T+D  
Sbjct: 427 LMAEEKGLKVDVIGYEEAKKEAQLISQN-KSGEVDDQINLDIHAITELQNEKIKPTNDIP 485

Query: 538 KFIW-------FQDHK-----SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
           K+ +       +++++     S I A+     F++ V  G EVGI+L  ++FYAEQGGQI
Sbjct: 486 KYNYKVISNKIYEEYEFAPCFSTIIALRRAKTFVDEVSSGEEVGILLDQTNFYAEQGGQI 545

Query: 586 FDEGFIEGL---FGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIA 642
           +DEGF+  +       +++NVQ+ GG+++HIG +++  G+    ++V   +D  RR+L+ 
Sbjct: 546 YDEGFLTKIDDEDSEVHIKNVQVRGGYILHIGIVSQ--GKLKKNDKVFSNIDTTRRRLLM 603

Query: 643 PNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIK 702
            NHT TH+LN+ALRE+LG  VDQKGS+V P++LRFDF++   +  E +R++E I N  I 
Sbjct: 604 SNHTATHVLNYALREILGTEVDQKGSLVAPDRLRFDFTNKGAMTTEQIRKVEEITNNIIN 663

Query: 703 AELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAE 762
               V++KE  L  AK I GLRA+F E YPDPVRVV+IG  VEDL  +P + + L  S E
Sbjct: 664 ENKMVYAKECNLGLAKTIQGLRAMFEETYPDPVRVVSIGIPVEDLEKNPLSSDALKTSVE 723

Query: 763 LCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV------- 815
            CGGTHL  T   + F ++SEE IAKGIRRI A+T   A KA +    L+  +       
Sbjct: 724 FCGGTHLHYTGHIKNFIIVSEEAIAKGIRRIVALTGPEAIKAQKKTSMLQNYLDELQITI 783

Query: 816 --------------------DDASKIEGSLLEKNQVRKAQKKVAE--ENLQKAVKVATET 853
                               DD S    S  +K+++RK  K + +  ++ ++A+K A   
Sbjct: 784 EADKNGINTKEHIKKIIELTDDVSHAIISSWKKDEIRKMLKDLKKILDDKERAIKTAITN 843

Query: 854 A----EAAASNGKPFCISRVEVGLDAAAVREAV---LKVIEQKG--MPVMVFSTDETTNK 904
                          C+  VE+ L A +  +A+   LK I         ++ S D    K
Sbjct: 844 VVLDNIQQIIQQNIGCLVLVEI-LQAYSNTKALDSALKKIRTISPETSALLISIDPDAKK 902

Query: 905 AVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAA 964
               + V  K   +K L+ +EW+   +  ++G+ G GK   A   GT+ + VT  +  A 
Sbjct: 903 IFALSSV-SKFAINKGLKANEWIQEIVPLMEGKGG-GKSESAQASGTNISCVTKLIYTAK 960

Query: 965 EFAAMKL 971
            FA  KL
Sbjct: 961 NFANSKL 967


>gi|326471957|gb|EGD95966.1| alanyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
          Length = 963

 Score =  850 bits (2195), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 480/965 (49%), Positives = 628/965 (65%), Gaps = 49/965 (5%)

Query: 42  ASAVAAMPGADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQ 101
           A++ ++ P A  + VEWPA +VRDTF  +F+   H    SS VVP++DPTLLFANAGMNQ
Sbjct: 2   AASTSSQPPAGQETVEWPALRVRDTFLDYFKKNGHTFVPSSSVVPLSDPTLLFANAGMNQ 61

Query: 102 YKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGD 161
           YK IFLGT DPN+  ++L RA N+QKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGD
Sbjct: 62  YKSIFLGTVDPNSDFAQLKRAHNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGD 121

Query: 162 YFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLP 220
           YFK EAI+++WELLTKVY L  DRLY TYF G+E AG+ PD EARDIW    +    +L 
Sbjct: 122 YFKKEAIQFSWELLTKVYGLDPDRLYVTYFEGNEAAGVGPDIEARDIWRSVGVKDDHILT 181

Query: 221 FGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDG 280
              KDNFWEMGD GPCGPCSEIHYDR G R+AA LVN DDP  +EIWN VFIQ+NRE D 
Sbjct: 182 GDMKDNFWEMGDQGPCGPCSEIHYDRIGGRNAAHLVNQDDPDVLEIWNNVFIQYNREPDR 241

Query: 281 SLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDA 340
           SL+PLP +HVDTGLG+ERL SILQNK SNYDTDVF P+F AIQ  TGARPY+GK GA+DA
Sbjct: 242 SLRPLPNQHVDTGLGYERLVSILQNKSSNYDTDVFSPLFTAIQNITGARPYTGKFGAEDA 301

Query: 341 DKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFN 399
           D +D AYRVVADH+RTL+FAI DG+ P NEGR YV+RR+LRR VRY  + L+ + G FF+
Sbjct: 302 DGIDTAYRVVADHLRTLTFAITDGAAPNNEGRGYVVRRVLRRGVRYARKYLQVEIGSFFS 361

Query: 400 GLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQ---DVQGKV 456
            LV  +V+ MGD+FPE+K+++  + EI+  EE SF KTL +G  +F+  AQ   D     
Sbjct: 362 KLVPALVEQMGDMFPEIKRKQTDVMEILDEEEVSFAKTLDRGERQFENYAQQALDSGAGK 421

Query: 457 LSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIV 516
           L G D + L+DT+GFP+DLT+LMAEER L +D   F  A  +A+E S+  Q K A   + 
Sbjct: 422 LHGADVWRLYDTFGFPVDLTRLMAEERQLTIDDAEFEEARLKAKEASK-GQAKTASDLLK 480

Query: 517 MDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESV--VPGNE-VGIVLA 573
           +     + L K GV  T+D  KF    +  + IKAI  G E I+S   +P NE +GI+L 
Sbjct: 481 LTVHTLSTLEKNGVPKTNDDAKF-RKGNIVANIKAICHGKEVIDSTKDIPANEQIGIILD 539

Query: 574 SSSFYAEQGGQIFDEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVIC 631
            ++FYAEQGGQ +D G   I+G      V+NVQ+YGG+V+H G +    G FSV + VI 
Sbjct: 540 KTNFYAEQGGQEYDTGKIVIDGQ-AELDVQNVQMYGGYVLHTGFIK--YGNFSVNDSVIA 596

Query: 632 KVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLR 691
           + D  RR  I  NHT TH+LNFALREVLGD VDQKGS+V  EKLRFDFSH   +    L 
Sbjct: 597 EYDELRRWPIRNNHTGTHILNFALREVLGDGVDQKGSLVAAEKLRFDFSHKSAISDSDLE 656

Query: 692 RIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADP 751
           +IE+   + I+    V+S+E  LA A+ I G+RAVFGE YPDPVRVV++G +++++L + 
Sbjct: 657 KIEAKSTDYIRQNCAVYSQEVPLATAREITGVRAVFGETYPDPVRVVSVGVELDEILKNV 716

Query: 752 ENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSL 811
           ++  W  +S E CGGTH+  T + +   +L E GIAKGIRRI AVT   A++    A   
Sbjct: 717 KDPRWEGVSIEFCGGTHVQKTGDIKDLVILEESGIAKGIRRIIAVTGEDAHEVQRIAREF 776

Query: 812 EKEVD--------------------DASKIEGSLLEK----NQVRKAQKKV--AEENLQK 845
            + ++                    D +++  S +EK    NQ  +  KK+  A++  QK
Sbjct: 777 GERLNRFEKMSAGPERDAEIKSLQVDLNQLTISAVEKTKYRNQFTQIHKKITDAQKAAQK 836

Query: 846 A-VKVATETAEAAASNGK--PFCISRVEVGLDAAAVREAVLKV-IEQKGMPVMVFSTDET 901
           A VK A +   A     K  P  + ++ +  +  A+ E++  V  +  G  + VF+ D T
Sbjct: 837 AEVKTAIDAISAYFEENKDSPSLVIKLPITANQKAISESLNHVKTKLSGKALYVFAAD-T 895

Query: 902 TNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMD 961
           +  A  C   P+ +  +K    +EW +A    + G+ G GK  +A G GT+  +V  A+D
Sbjct: 896 SKVAHGCYVTPDLT--TKGASANEWASAVSSIVGGKAG-GKAPVAIGNGTEVNKVDEALD 952

Query: 962 LAAEF 966
            A ++
Sbjct: 953 EATKY 957


>gi|395332352|gb|EJF64731.1| hypothetical protein DICSQDRAFT_51965 [Dichomitus squalens LYAD-421
           SS1]
          Length = 959

 Score =  849 bits (2194), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 465/950 (48%), Positives = 611/950 (64%), Gaps = 46/950 (4%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A +VR+ FF FF  K+H    SS  +P  DPTLLFANAGMNQ+K IFLGT DP+++L++L
Sbjct: 14  AAQVREHFFAFFRSKDHPYVPSSSTIPYEDPTLLFANAGMNQFKSIFLGTVDPHSELARL 73

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            RA N+QKCIRAGGKHNDL+DVGKD+YHHTFFEMLGNWSFGDYFK EAI ++WELLT VY
Sbjct: 74  KRAFNSQKCIRAGGKHNDLEDVGKDSYHHTFFEMLGNWSFGDYFKKEAISYSWELLTGVY 133

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
           +LP D+LY TYF GD K GL PD EA+  WL   +    ++P   KDNFWEMG TGPCGP
Sbjct: 134 KLPKDQLYVTYFEGDPKNGLEPDLEAKQYWLATGVAEDHIIPGNAKDNFWEMGATGPCGP 193

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIH+DR G R+AA  VN DDP  +EIWN VFIQFNRE DGSL+PLPAKHVDTG+GFER
Sbjct: 194 CSEIHFDRIGGRNAADRVNQDDPDVLEIWNNVFIQFNREEDGSLRPLPAKHVDTGMGFER 253

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S++QNK SNYDTDVF P+F  IQ+ TG R Y+GK G +D D VD AYRV+ADH+RTL+
Sbjct: 254 LVSVVQNKRSNYDTDVFAPLFAKIQELTGVRAYAGKFGDEDPDGVDTAYRVIADHVRTLT 313

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFPELK 417
           FA++DG  P N GR YVLRRILRR  R+  + L    G FF+ LV +VV+ MG VFPE+ 
Sbjct: 314 FALSDGGVPNNVGRGYVLRRILRRGARFARKKLGVPIGAFFSSLVPVVVEQMGSVFPEIT 373

Query: 418 QREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLD 474
           Q+   I+EI+  EE SF +TL +G    E++ K A +   K LSG+D + L+DTYGFP+D
Sbjct: 374 QKYDEIKEILDEEEESFSRTLDRGEKLFEQYAKKALEAGQKELSGKDVWRLYDTYGFPVD 433

Query: 475 LTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR-GVLAT 533
           LT+LMAEE GL V+   F  A   ++E S++   K AG  + +D    AAL K   V  T
Sbjct: 434 LTRLMAEELGLGVNEAEFEAAQAASKEASKAGVKKGAGETVALDVHDIAALEKNVDVPKT 493

Query: 534 DDSFKFIWFQDHKSVIKAIYTGSEFIESV--VPGNEV-GIVLASSSFYAEQGGQIFDEG- 589
           DDSFKF        V+ AIY    F+++   +P +   G++L  +SFYAE GGQ +D G 
Sbjct: 494 DDSFKFQRGSITAKVV-AIYNKKAFLKTTGEIPEDTTFGLILDRTSFYAESGGQEYDTGS 552

Query: 590 -FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
             I+G+   F V NVQ++ G+V+HIG +    G+ +VG+E++   D  RR  +  NHT T
Sbjct: 553 IIIDGV-AEFEVTNVQVFNGYVLHIGRMK--YGKLAVGDEIVSSYDELRRWPLRNNHTAT 609

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+LN++LREVLGDH+DQKGS+V P KLRFDFSH   V P  L +IE++  + ++  + V+
Sbjct: 610 HILNYSLREVLGDHIDQKGSLVAPTKLRFDFSHKAQVTPAELAKIEALSQDWVRRNVGVY 669

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
           +KE  L  A+ I+ LRAVFGE YPDPVRVVA+   VE++  D EN  W   S ELCGGTH
Sbjct: 670 AKELALPVAQKIHSLRAVFGESYPDPVRVVALEYPVEEIAQDLENPRWRKTSIELCGGTH 729

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVD------DASK-- 820
           ++ T E + F +  E GIAKGIRR+ AVT   A +A     SL  +++      DA K  
Sbjct: 730 VAKTGEIKDFIVTEESGIAKGIRRVVAVTGHEAAEARRQGESLTAQLNRIESLGDAEKDV 789

Query: 821 -----------IEGSLLEKNQVRK---AQKKVAEENLQKAVKVATETAEAAASN------ 860
                       + SLL+KN++R    A +K  ++ L+     A + A  A         
Sbjct: 790 ALKAYTVQIGQADISLLKKNELRDRLGAVRKAFDKYLKDKEAAANKAAGDALQQFFKEKP 849

Query: 861 GKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQ 920
             P   + ++V  +A  ++  VL+  ++ G  + +FS D    K      V E + ++K 
Sbjct: 850 DAPAYFAVLDVNANAKVLQGVVLQA-KKLGKSIYIFSADAANGKVAHVNAVSEAA-KAKG 907

Query: 921 LEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMK 970
           L+  EW  A +  L G+ G GK   A G GT+ ++V  A++ A +F   K
Sbjct: 908 LDGREWANAVVDILGGKAG-GKPDGAQGVGTEVSKVQDALEAARKFFETK 956


>gi|242012157|ref|XP_002426803.1| Alanyl-tRNA synthetase, putative [Pediculus humanus corporis]
 gi|212510999|gb|EEB14065.1| Alanyl-tRNA synthetase, putative [Pediculus humanus corporis]
          Length = 983

 Score =  849 bits (2194), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 473/969 (48%), Positives = 615/969 (63%), Gaps = 68/969 (7%)

Query: 60  ATKVRDTFFKFF-EDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSK 118
           + +VR TF  FF + K H    SS  +P++DPTLLFANAGMNQ+KPIFLGTADPN+ ++K
Sbjct: 6   SKEVRQTFIDFFIKKKQHQYVHSSSTIPLDDPTLLFANAGMNQFKPIFLGTADPNSDMAK 65

Query: 119 LTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKV 178
             R  NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFGDYFK E   WAWELLT V
Sbjct: 66  WVRVVNTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKEICAWAWELLTTV 125

Query: 179 YRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCG 237
           Y +  DRLY TYFGGD  +GL PD+E + IW+   +P S VLP   KDNFWEMG+TGPCG
Sbjct: 126 YHISPDRLYVTYFGGDSASGLEPDSECKKIWIDLGVPESHVLPGNMKDNFWEMGETGPCG 185

Query: 238 PCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFE 297
           PCSE+HYDR GNR+A+ LVN DDP  +EIWN+VFIQFNRE+DGSLK LP +H+D G+GFE
Sbjct: 186 PCSELHYDRIGNRNASHLVNQDDPDVLEIWNLVFIQFNRETDGSLKTLPKRHIDCGMGFE 245

Query: 298 RLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTL 357
           RL S++QNK SNYDTD+F P+FDAIQ+ TG+ PY GKVGA+D D +DMAYRV+ADH RTL
Sbjct: 246 RLVSVIQNKRSNYDTDIFTPLFDAIQKGTGSPPYKGKVGAEDVDGIDMAYRVLADHARTL 305

Query: 358 SFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELK 417
           + A+ADG  P N GR YVLRRILRRA+RYG+E L  +  FF+ LV  V   +GD F E++
Sbjct: 306 TIALADGGRPDNVGRGYVLRRILRRAIRYGTEKLNTKPKFFSSLVKTVCDTLGDTFSEIR 365

Query: 418 QREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLT 476
           +    I EII  EE  F KTL +G     +    + + KVL G  A+ L+DTYGFP+DLT
Sbjct: 366 RDPDTIMEIINEEEEQFLKTLSRGRNLLNRTIAKIGKSKVLPGDVAWRLYDTYGFPVDLT 425

Query: 477 QLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDS 536
           QLMAEE+GL VD+ G+  A  +A+  S+  + K   G I +D  A   L    +  TDDS
Sbjct: 426 QLMAEEKGLSVDMTGYEEARKQAQLLSQGKEGKVDDG-IALDVHAITELQNLKIPPTDDS 484

Query: 537 FKFIW------------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
            K+ +            FQ  ++ I AI    +F++S+  G + GI+L  + FYAEQGGQ
Sbjct: 485 PKYNYKAKQQDKNAEYEFQKCEAKITAIRHKKKFVDSINSGEKCGILLDRTLFYAEQGGQ 544

Query: 585 IFDEGFI-----EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRK 639
           IFDEG++     E +   F + NVQ+  G+V+H G+ TEG   F  G+ V+  +D  RR+
Sbjct: 545 IFDEGYMIKKNDENV--EFSIYNVQVKAGYVLHFGT-TEGV--FKKGDTVVLHLDTARRR 599

Query: 640 LIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNE 699
           L+  NHT TH+LNFALREVLG   +QKGS+V P++LRFDF++   + P+ ++  E  V  
Sbjct: 600 LVMNNHTGTHILNFALREVLGSGCEQKGSLVAPDRLRFDFTNKSAMTPDQIKAAEDSVKR 659

Query: 700 QIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSI 759
            I    +VF+K   LA AK +NG+RA+F E YPDPVR+V++G  VEDL+A+P +   +S+
Sbjct: 660 VIAKNCEVFAKNTPLAVAKTVNGVRAMFDEHYPDPVRIVSVGAAVEDLVANPSSSLGMSV 719

Query: 760 SAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDAS 819
            AE CGGTHL  +     F + SEE IAKGIRRI A+T   A KA + A  LE EV++  
Sbjct: 720 PAEFCGGTHLHRSGHVGDFVISSEEAIAKGIRRIVALTGPEASKALKKAAILENEVNE-- 777

Query: 820 KIEGSLLEKNQVRKAQKKV---------------AEENLQKAVKV----------ATETA 854
            I+  + + +  +   KK+                +E L+ A+KV          A + A
Sbjct: 778 -IKQKMNDSSAQKMIPKKIISLTDDISHAVIPYWKKEELRNALKVLKKQLDDKERANKAA 836

Query: 855 EAA-----------ASNGKPFCISRVEVGLDAAAVREAVLKVIE-QKGMPVMVFSTDETT 902
            AA           A+  KPF ++ V+   +  AV  A+ +V         M FS D   
Sbjct: 837 LAAGVVEQAKKIIEANLNKPFIVAEVKAFSNNKAVDTALKQVKALSPNTAAMFFSVDPDA 896

Query: 903 NKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDL 962
           NK    A VP KS  S+ L   +W+      LKG+ G GK   A G G++ + +  AMD 
Sbjct: 897 NKIFYLASVP-KSANSQGLSAGDWVNHVSPLLKGKGG-GKAESAQGSGSNFSALNEAMDA 954

Query: 963 AAEFAAMKL 971
           A +FA+ KL
Sbjct: 955 ARKFASSKL 963


>gi|392573898|gb|EIW67036.1| hypothetical protein TREMEDRAFT_34057 [Tremella mesenterica DSM
           1558]
          Length = 977

 Score =  849 bits (2194), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 467/966 (48%), Positives = 608/966 (62%), Gaps = 56/966 (5%)

Query: 53  PQVVEWPATKVRDTFFKFFEDK---NHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGT 109
           P   +WPA+KVR TF  +F  +    H  W SS V+P  D TLLFANAGMNQ+KP+FLGT
Sbjct: 18  PSPKDWPASKVRQTFIDYFAQQPGFEHTFWPSSGVIPFEDDTLLFANAGMNQFKPLFLGT 77

Query: 110 ADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIE 169
           ADP ++LSKL RA N+QKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK  A+ 
Sbjct: 78  ADPKSELSKLHRAVNSQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKIGALT 137

Query: 170 WAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFW 228
            AW+LLT+VY LP DRLY TYF GDEK GL PDNEA++IW +  +P + +L    KDNFW
Sbjct: 138 MAWDLLTRVYGLPKDRLYVTYFEGDEKQGLEPDNEAKEIWKQLGVPETHILTGNAKDNFW 197

Query: 229 -EMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
            EMG TGPCGPCSEIH+DR G RDA+ LVN DDP  +EIWN VFIQ+NRES G+L+ LPA
Sbjct: 198 VEMGATGPCGPCSEIHFDRIGGRDASHLVNADDPNVLEIWNNVFIQYNRESSGALRSLPA 257

Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
           KHVDTG+GFERL S+L N  SNYDTDVF PIF  IQ+ TGARPY+GK+G +D D VD AY
Sbjct: 258 KHVDTGMGFERLVSVLHNVSSNYDTDVFTPIFAKIQELTGARPYTGKLGDEDKDGVDTAY 317

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVV 406
           RV+ADHIRTL+ AI+DG  P  +GR YVLRRILRR VRY S  +  + G FF+ LV  VV
Sbjct: 318 RVIADHIRTLTIAISDGGVPDKDGRGYVLRRILRRGVRYASNKMNVKIGSFFSSLVPTVV 377

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKK----AAQDVQGKVLSGQDA 462
             +  +FPE+ +R   + EI+  EEASF +TL +G   F K    AAQ+ +  VLSG+D 
Sbjct: 378 DSLSGIFPEVTKRIPELIEILNEEEASFARTLNRGETLFSKYAAIAAQE-KRTVLSGKDI 436

Query: 463 FILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADAT 522
           + L+DTYGFP+DLTQ+MAEERGL +D   F  A  E+ E S++      G  I +D    
Sbjct: 437 WRLYDTYGFPVDLTQIMAEERGLKIDQVAFEKARLESLEASKAGGKAAGGVQIKLDVHDL 496

Query: 523 AALHKRG-VLATDDSFKFIWFQDHKSVIKAIYTGSEFIES---VVPGNEVGIVLASSSFY 578
           AAL +   V  TDDS K+    D ++ +K IY  S+F +S   + P    GI+L  ++FY
Sbjct: 497 AALEENADVPKTDDSAKY-QLDDIEATVKGIYYQSKFHQSTSELPPNVPFGILLNKTNFY 555

Query: 579 AEQGGQIFDEGF--IEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYD 636
           AE GGQ  D G   I+G    F V +VQ+Y G+V+H+G + E  G   +G+EVIC  D  
Sbjct: 556 AESGGQENDTGVLAIDGK-AEFKVEDVQVYNGYVLHVGQMEE--GEIKLGDEVICTYDEL 612

Query: 637 RRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESI 696
           RR  I  NHT TH+LNFALREVLGDH+DQKGS+V P KLRFDFSH K +  + + +IE+I
Sbjct: 613 RRWPIRNNHTGTHILNFALREVLGDHIDQKGSLVAPSKLRFDFSHNKAISVDEIAKIEAI 672

Query: 697 VNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEW 756
            NE IK  + V++KE +L  A  I GLRAVFGE YPDPVRVV+IG  +E++  + E+ +W
Sbjct: 673 SNEWIKKAVPVYAKEMSLQAAYKIPGLRAVFGEAYPDPVRVVSIGYPLEEISQNIEDTKW 732

Query: 757 LSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVD 816
            S S E CGGTH++ T + + F ++ E  IAKGIRRI AVT   A          E+ ++
Sbjct: 733 RSTSIEFCGGTHVAKTDDIKDFVIIEESSIAKGIRRIVAVTGHDANDVSRRGLEFERRLE 792

Query: 817 DASKIEG-------------------SLLEKNQVRK------------AQKKVAEENLQK 845
               ++G                   SL++++ +++             + ++A E  Q 
Sbjct: 793 RIESMQGKEKETSMKPYLAELGQSGISLVKRHSLQRRFDKLSSDLAAITKTRLAAEQKQV 852

Query: 846 AVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKA 905
           + ++ T   E    N     +    V  +   +  AV          +  FS++  T K 
Sbjct: 853 SEEIKTFFLENPNEN---VYVGIFGVDGNIKVLSAAVTSTGRTLSKAIYAFSSEIDTGKV 909

Query: 906 VVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAE 965
                VP++    K L+   WL+   + L G+ G G+   A+G G +  ++  A+ +A E
Sbjct: 910 THVNYVPKEILDKKSLDAKVWLSEVSKVLGGKGG-GRDDSATGVGVEGGKIEEALKVAKE 968

Query: 966 FAAMKL 971
               K+
Sbjct: 969 VYKSKV 974


>gi|401888987|gb|EJT52930.1| alanine-tRNA ligase [Trichosporon asahii var. asahii CBS 2479]
          Length = 973

 Score =  848 bits (2192), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 440/821 (53%), Positives = 554/821 (67%), Gaps = 22/821 (2%)

Query: 53  PQVVEWPATKVRDTFFKFFEDK---NHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGT 109
           P   +WPA KVR TF  +F ++    H  W SS  +P +D TLLFANAGMNQYKP+FLGT
Sbjct: 19  PSPEDWPAAKVRSTFIDYFVNQPGFEHTFWPSSGSIPFDDDTLLFANAGMNQYKPLFLGT 78

Query: 110 ADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIE 169
           ADP + L+KL+RA N+QKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK  A+ 
Sbjct: 79  ADPKSDLAKLSRAVNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKLGALT 138

Query: 170 WAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFW 228
            AW+LLT+VY LP DRLY TYF GD   GL PD EA+ IW    +P S +LP   KDNFW
Sbjct: 139 MAWDLLTRVYGLPKDRLYVTYFEGDAAQGLEPDLEAKKIWQDLGVPESHILPGNAKDNFW 198

Query: 229 EMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           EMG TGPCGPCSEIH+DR G R+AA LVN DDP  +EIWN VFIQ+NRE+DGSL+PLPA 
Sbjct: 199 EMGATGPCGPCSEIHFDRIGGREAAHLVNMDDPDVLEIWNNVFIQYNRENDGSLRPLPAT 258

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
           H+DTG+GFERL S+L N  SNYDTDVF PIF  IQ+ TGARPY GK+GADD D +D AYR
Sbjct: 259 HIDTGMGFERLVSVLHNVSSNYDTDVFTPIFKRIQELTGARPYEGKLGADDKDGIDTAYR 318

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVK 407
           V+ADHIRTL+ AI+DG  P  +GR YVLRRILRR VRY +    A+ G FF+ LV+  V+
Sbjct: 319 VIADHIRTLTIAISDGGVPDKDGRGYVLRRILRRGVRYANSKFGAEMGTFFSSLVDTTVE 378

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG--KVLSGQDAFIL 465
            + ++FPE+ ++   ++EI+  EE SF +TL +G   F K A+      K L+G+D + L
Sbjct: 379 TLKEIFPEVTKKIPELKEILDEEEQSFARTLKRGEILFNKYAEAAAAGDKTLAGRDTWRL 438

Query: 466 WDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAAL 525
           +DTYGFP+DLTQ+MAEERGL +D E F  A  E+ E S++   K A G +  D     AL
Sbjct: 439 YDTYGFPVDLTQIMAEERGLKIDEEAFEKARLESLEASKAGGKKGAAGGVKFDVHDLGAL 498

Query: 526 HKR-GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESV--VP-GNEVGIVLASSSFYAEQ 581
                V  TDD FK+    D  + IKAIY  S+F ES   VP G   GI+L  ++FYAE 
Sbjct: 499 EANDAVPKTDDDFKYKK-GDISAAIKAIYHQSKFYESTKDVPEGEPFGILLDKTNFYAES 557

Query: 582 GGQIFDEGF--IEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRK 639
           GGQ +D G   I+G    F V +VQ+Y G+V+H+G L E  G   + +EVIC +D  RR 
Sbjct: 558 GGQEYDTGVIAIDGQ-AEFKVEDVQVYNGYVLHVGRLEE--GELKLNDEVICTIDELRRW 614

Query: 640 LIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNE 699
            I  NHT TH+LNFALR+VLGD +DQKGS+V P KLRFDFSH K + P  L++IE + N 
Sbjct: 615 PIRNNHTGTHILNFALRDVLGDGIDQKGSLVAPTKLRFDFSHNKAISPADLKKIEDLCNA 674

Query: 700 QIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSI 759
           +IK  L V+SKE  LA A+ I GLRAVFGE YPDPVRVV+IG  +ED+  + E+ +W + 
Sbjct: 675 EIKKALAVYSKELPLATAQKIPGLRAVFGERYPDPVRVVSIGFPLEDIEKNIEDPKWATT 734

Query: 760 SAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDAS 819
           S E CGGTH++ T + + F ++ E  IAKGIRR+ AVT   A      +    +++D  +
Sbjct: 735 SIEFCGGTHVAKTDDIKDFVIVEESSIAKGIRRMVAVTGHEAADVQRKSAEFGRKLDRIA 794

Query: 820 KIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASN 860
                 +E  +   A K + +E  Q  + V  + A     N
Sbjct: 795 N-----MEPKEREAALKPIPQELGQSGISVLNKLAHQERYN 830


>gi|167518337|ref|XP_001743509.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778608|gb|EDQ92223.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1000

 Score =  848 bits (2191), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 463/914 (50%), Positives = 604/914 (66%), Gaps = 49/914 (5%)

Query: 54  QVVEWPATKVRDTFFKFF-EDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADP 112
           Q  +W A KVR T+  FF E K HV W SS  VP +DPTLLF NAGMNQ+K +F GT DP
Sbjct: 3   QEQDWNAAKVRQTYIDFFVEKKEHVFWPSSSSVPHDDPTLLFCNAGMNQFKKVFQGTVDP 62

Query: 113 NTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAW 172
           N+ ++K++R  N+QKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK EAI+W++
Sbjct: 63  NSDMAKVSRTVNSQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKAEAIQWSF 122

Query: 173 ELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGD 232
           ELLT+VY L ADRLYATYF GD +  +  D EA+++WLK LPA  VLP   KDNFWEMG 
Sbjct: 123 ELLTEVYGLSADRLYATYFEGDTEQNIPEDVEAKELWLKLLPADHVLPGNKKDNFWEMGA 182

Query: 233 TGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDT 292
           TGPCGPCSE+HYDR G R+AASLVN DDP  +EIWN+VF+QFNRE D SL+ LPA+H+DT
Sbjct: 183 TGPCGPCSELHYDRIGGRNAASLVNQDDPDVLEIWNLVFMQFNREPDASLRLLPARHIDT 242

Query: 293 GLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVAD 352
           G+G ERL S+LQ+K SNYDTDVF P FD IQQ  G RPY+GKVG +D D +D AYRV+AD
Sbjct: 243 GMGLERLVSVLQDKRSNYDTDVFQPYFDVIQQVCGCRPYAGKVGKED-DGIDTAYRVLAD 301

Query: 353 HIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDV 412
           HIRTL+ +I+DG  P N GR YVLR I+RRAVR+  + LKA + FF+ LV  VV+ +GD 
Sbjct: 302 HIRTLTISISDGGEPDNTGRGYVLRLIIRRAVRFAEDYLKAPEYFFSSLVPTVVEQLGDA 361

Query: 413 FPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFP 472
           FPE+K+   H+ E++ AEE  F +TL +G   F++AA      V+ G  A+ LW TYGFP
Sbjct: 362 FPEIKRDPEHVIEVLKAEEKQFRRTLNRGRRLFQRAADKATDGVIDGHVAWQLWGTYGFP 421

Query: 473 LDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLA 532
           +DLT++MAEERGL VD + F  A +EA + S+  + K A   I +D      L   G+ A
Sbjct: 422 VDLTKVMAEERGLTVDEKTFEAAREEAVKVSQMGK-KMAIEGIDLDVHDLDKLKADGIAA 480

Query: 533 TDDSFKFIW---------FQDHKSVIKAIYTGSEFIESVVPGNE---VGIVLASSSFYAE 580
           TDDSFK+ +         F+D ++ + A+ T S F++S+   ++   VG+VL  ++FYAE
Sbjct: 481 TDDSFKYDYGLVGDNSYEFKDLEAKVVALRTESGFVDSLDGSDDSVNVGVVLDRTNFYAE 540

Query: 581 QGGQIFDEGFIEGLFG--SFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRR 638
           QGGQ +D GF     G   F V +VQ  G + +HIG L+ G     VG+ +    D +RR
Sbjct: 541 QGGQTYDTGFFRDANGELDFTVMDVQKKGPYCLHIGVLSNGT--LKVGDTLTLSFDVERR 598

Query: 639 KLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVN 698
           +    NHT TH+LNFALR+VLG+  DQKGS+V PE+LRFDF+  K +  E +++ E +VN
Sbjct: 599 RPCMSNHTATHVLNFALRKVLGE-ADQKGSLVEPERLRFDFTAKKGMTIEQIQQTEKLVN 657

Query: 699 EQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLS 758
           E + A+  V + +A LA A+ INGLRA+FGE YPDPVRVV++G  V+D+L DP ++  L+
Sbjct: 658 EVVNAKKPVDAMDAPLASAREINGLRAMFGETYPDPVRVVSVGAIVKDVLDDPVSEVALA 717

Query: 759 ISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV-DD 817
            S E CGGTH+ N+ +   FA+L+EE I+KGIRRI AVT   A KA   A  L+ EV DD
Sbjct: 718 NSIEFCGGTHVKNSGDIVQFAILNEEAISKGIRRIVAVTGSEARKAQTEANRLDAEVRDD 777

Query: 818 ASKIEGSLLE------------KNQVR---KAQKKVAEENLQKAVKVATETAEAAAS--- 859
            +  E   L+            K+ +R   KA  K   + L++  K     AE  A    
Sbjct: 778 LTMKEVVALDTEVSQAAIPATRKDAIRSRLKALHKKHSDVLKERRKAMAGNAEKRAKELL 837

Query: 860 --NGKPFCISRVEVGLDAAAVREAVLKVIEQKGMP---VMVFSTDETTNKAVVCAGVPEK 914
               KP  +  +EVG +  A+ EA LKV+ + G P    M F  +E    A  C  VPE 
Sbjct: 838 EEEAKPVVVEVLEVGANGKAIGEA-LKVL-KVGRPDTAFMFFGVEE-GGVAFNCM-VPE- 892

Query: 915 SDQSKQLEVSEWLT 928
           +  +K L+  +W++
Sbjct: 893 ALVAKGLKAGDWVS 906


>gi|449299241|gb|EMC95255.1| hypothetical protein BAUCODRAFT_25335 [Baudoinia compniacensis UAMH
           10762]
          Length = 1306

 Score =  848 bits (2190), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 461/936 (49%), Positives = 591/936 (63%), Gaps = 65/936 (6%)

Query: 45  VAAMPGADPQVVEWPATKVRDTFFK-------------FFEDKNHVNWKSSPVVPVNDPT 91
           + +  G +P   EW A KVR  F +             +F+D+ H    SS VVP++DPT
Sbjct: 1   MGSTTGQEP---EWTAPKVRSAFIETLRWNTKANHDDSYFKDRGHTFVPSSSVVPLSDPT 57

Query: 92  LLFANAGMNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFF 151
           LLF NAGMNQYK IFLGT DP++  +KL RA N+QKCIRAGGKHNDLDDVGKD+YHHTFF
Sbjct: 58  LLFTNAGMNQYKSIFLGTVDPDSDFAKLKRAVNSQKCIRAGGKHNDLDDVGKDSYHHTFF 117

Query: 152 EMLGNWSFGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK 211
           EMLGNWSFGDYFK EAIE +WELLTKV+ L  DRLY TYF G   AGL PD EAR  W  
Sbjct: 118 EMLGNWSFGDYFKKEAIEMSWELLTKVFGLDPDRLYVTYFEGKSDAGLEPDEEARKYWKA 177

Query: 212 F-LPASRVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIV 270
             +    +L    KDNFWEMGD GPCGPCSEIHYDR G R+AA LVN DDP  +EIWN V
Sbjct: 178 VGVADDHILTGNMKDNFWEMGDQGPCGPCSEIHYDRIGGRNAAHLVNQDDPNVLEIWNNV 237

Query: 271 FIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARP 330
           FIQ+NRE D SL+PLP KHVDTGLGFERL S+LQNKMSNYDTDVF P+F  IQ+ TGAR 
Sbjct: 238 FIQYNREPDRSLRPLPNKHVDTGLGFERLVSVLQNKMSNYDTDVFTPLFKTIQEVTGARE 297

Query: 331 YSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEV 390
           Y GK G +D D +D AYRV+ADH+RTL+FAI+DG  P N GR YV+RR+LRR  RY  + 
Sbjct: 298 YRGKFGDEDVDGIDTAYRVIADHVRTLTFAISDGGVPNNVGRGYVVRRVLRRGARYARKY 357

Query: 391 LKAQDG-FFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKG---IEKFK 446
                G FF  +V  +V  MG++FPE+K +++ + +I+  EE SF KTL +G    E+F 
Sbjct: 358 FDVTIGDFFAKIVPTLVAQMGEMFPEIKAKQSDVVQILDEEEVSFAKTLDRGESMFERFA 417

Query: 447 KAAQDVQGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSA 506
           +  +    K LSG D + L+DTYGFP+DLT+LMAEERGL +D +    A ++ARE S+  
Sbjct: 418 QQCKKTDAKELSGADVWRLYDTYGFPVDLTKLMAEERGLDIDDKAVAEAQEKAREASK-G 476

Query: 507 QNKQAGGAIVMDADATAALHKR-GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIES---V 562
           + K A   + ++     AL +   V  TDDS KF     H  VI+AIY G +F++S   +
Sbjct: 477 EKKAAADLLKLNVHDINALEQMPDVPKTDDSPKFQRENVH-GVIRAIYVGGKFVDSTKEI 535

Query: 563 VPGNEVGIVLASSSFYAEQGGQIFDEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGA 620
              +++G++L  +SFYAEQGGQ  D G   I+G      V+NVQ+Y G+V+H G +  G+
Sbjct: 536 SESDQIGLILDRTSFYAEQGGQENDTGRILIDGE-AEIDVQNVQVYAGYVMHTGFMNYGS 594

Query: 621 GRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFS 680
             F VG+EV+C  D  RR+ I  NHT TH+LNFALREVLGD V+Q+GS+V PEKLRFDFS
Sbjct: 595 --FKVGDEVLCDYDELRRQPIRNNHTGTHILNFALREVLGDEVNQRGSLVAPEKLRFDFS 652

Query: 681 HGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAI 740
           H      E L +IE +    I+   +V++ E  LA A+ I G+RAVFGE YPDPVRVV+I
Sbjct: 653 HKAGCSDEELVKIEDLSTSYIRQNSEVYASEVPLATARNIEGVRAVFGETYPDPVRVVSI 712

Query: 741 GRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGL 800
           G  VE+LL D + KEW S+S E CGGTH+ NT E +   +L E GIAKGIRRI AVT   
Sbjct: 713 GVPVEELLEDVKRKEWRSVSIEFCGGTHVKNTTEIKELVILEESGIAKGIRRIVAVTGAA 772

Query: 801 AYKAFEAACSLEKEVD--------------------DASKIEGSLLEKNQVRKAQKKVAE 840
           A+     A   +K++                     +  K+E + + K+++R+   KV +
Sbjct: 773 AHDVQREASEWDKKISKLETMEYGVEKEARTKEWQHELGKVEIAAVAKSKLRERVAKVVK 832

Query: 841 ENL--QKAVKVATETAEAAASN--------GKPFCISRVEVGLDAAAVREAVLKVIEQKG 890
           ENL  QK  + A         N         K   +S + V   + AV+E + KVI  K 
Sbjct: 833 ENLDHQKTAQKAENKRVLDVVNDHFEQNKDAKTLVLS-LPVSAGSKAVQETI-KVISSKH 890

Query: 891 MPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEW 926
               V+   +  +K +    V E++ Q K  + S+W
Sbjct: 891 KDKTVYLLGKADDKVLHGCFVSEEA-QGKGADASKW 925


>gi|406695477|gb|EKC98782.1| alanine-tRNA ligase [Trichosporon asahii var. asahii CBS 8904]
          Length = 1096

 Score =  848 bits (2190), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 440/821 (53%), Positives = 554/821 (67%), Gaps = 22/821 (2%)

Query: 53  PQVVEWPATKVRDTFFKFFEDK---NHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGT 109
           P   +WPA KVR TF  +F ++    H  W SS  +P +D TLLFANAGMNQYKP+FLGT
Sbjct: 142 PSPEDWPAAKVRSTFIDYFVNQPGFEHTFWPSSGSIPFDDDTLLFANAGMNQYKPLFLGT 201

Query: 110 ADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIE 169
           ADP + L+KL+RA N+QKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK  A+ 
Sbjct: 202 ADPKSDLAKLSRAVNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKLGALT 261

Query: 170 WAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFW 228
            AW+LLT+VY LP DRLY TYF GD   GL PD EA+ IW    +P S +LP   KDNFW
Sbjct: 262 MAWDLLTRVYGLPKDRLYVTYFEGDAAQGLEPDLEAKKIWQDLGVPESHILPGNAKDNFW 321

Query: 229 EMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           EMG TGPCGPCSEIH+DR G R+AA LVN DDP  +EIWN VFIQ+NRE+DGSL+PLPA 
Sbjct: 322 EMGATGPCGPCSEIHFDRIGGREAAHLVNMDDPDVLEIWNNVFIQYNRENDGSLRPLPAT 381

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
           H+DTG+GFERL S+L N  SNYDTDVF PIF  IQ+ TGARPY GK+GADD D +D AYR
Sbjct: 382 HIDTGMGFERLVSVLHNVSSNYDTDVFTPIFKRIQELTGARPYEGKLGADDKDGIDTAYR 441

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVK 407
           V+ADHIRTL+ AI+DG  P  +GR YVLRRILRR VRY +    A+ G FF+ LV+  V+
Sbjct: 442 VIADHIRTLTIAISDGGVPDKDGRGYVLRRILRRGVRYANSKFGAEMGTFFSSLVDTTVE 501

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG--KVLSGQDAFIL 465
            + ++FPE+ ++   ++EI+  EE SF +TL +G   F K A+      K L+G+D + L
Sbjct: 502 TLKEIFPEVTKKIPELKEILDEEEQSFARTLKRGEILFNKYAEAAAAGDKTLAGRDTWRL 561

Query: 466 WDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAAL 525
           +DTYGFP+DLTQ+MAEERGL +D E F  A  E+ E S++   K A G +  D     AL
Sbjct: 562 YDTYGFPVDLTQIMAEERGLKIDEEAFEKARLESLEASKAGGKKGAAGGVKFDVHDLGAL 621

Query: 526 HKR-GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESV--VP-GNEVGIVLASSSFYAEQ 581
                V  TDD FK+    D  + IKAIY  S+F ES   VP G   GI+L  ++FYAE 
Sbjct: 622 EANDAVPKTDDDFKYK-KGDISAAIKAIYHQSKFYESTKDVPEGEPFGILLDKTNFYAES 680

Query: 582 GGQIFDEGF--IEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRK 639
           GGQ +D G   I+G    F V +VQ+Y G+V+H+G L E  G   + +EVIC +D  RR 
Sbjct: 681 GGQEYDTGVIAIDGQ-AEFKVEDVQVYNGYVLHVGRLEE--GELKLNDEVICTIDELRRW 737

Query: 640 LIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNE 699
            I  NHT TH+LNFALR+VLGD +DQKGS+V P KLRFDFSH K + P  L++IE + N 
Sbjct: 738 PIRNNHTGTHILNFALRDVLGDGIDQKGSLVAPTKLRFDFSHNKAISPADLKKIEDLCNA 797

Query: 700 QIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSI 759
           +IK  L V+SKE  LA A+ I GLRAVFGE YPDPVRVV+IG  +ED+  + E+ +W + 
Sbjct: 798 EIKKALAVYSKELPLATAQKIPGLRAVFGERYPDPVRVVSIGFPLEDIEKNIEDPKWATT 857

Query: 760 SAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDAS 819
           S E CGGTH++ T + + F ++ E  IAKGIRR+ AVT   A      +    +++D  +
Sbjct: 858 SIEFCGGTHVAKTDDIKDFVIVEESSIAKGIRRMVAVTGHEAADVQRKSAEFGRKLDRIA 917

Query: 820 KIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASN 860
                 +E  +   A K + +E  Q  + V  + A     N
Sbjct: 918 N-----MEPKEREAALKPIPQELGQSGISVLNKLAHQERYN 953


>gi|170039921|ref|XP_001847766.1| alanyl-tRNA synthetase [Culex quinquefasciatus]
 gi|167863508|gb|EDS26891.1| alanyl-tRNA synthetase [Culex quinquefasciatus]
          Length = 967

 Score =  848 bits (2190), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 459/975 (47%), Positives = 606/975 (62%), Gaps = 78/975 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R+ F  FF++K H+   SS  +P++DPTLLFANAGMNQ+KPIFLGTADPN+++SK 
Sbjct: 7   AKQIRNIFLDFFKEKEHLYVHSSSTIPLDDPTLLFANAGMNQFKPIFLGTADPNSEMSKW 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFGDYFK E   WAWELLT   
Sbjct: 67  VRTANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKEICTWAWELLTDRL 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
           +LP+DRLY TYFGG  ++GL PD E RDIWLK  +    +LP   KDNFWEMG+TGPCGP
Sbjct: 127 KLPSDRLYVTYFGGHPESGLEPDLECRDIWLKLGVKEEHILPGSMKDNFWEMGETGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSE+H+DR G R    LVN DDP  +EIWN+VFIQFNRE DGSLK LP KH+D G+G+ER
Sbjct: 187 CSELHFDRIGGRSVPELVNMDDPDVLEIWNLVFIQFNREQDGSLKLLPKKHIDCGMGYER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S++Q+K SNYDTDVF+P+F AIQ+ TGA  Y G+VGA+D D VDMAYRV+ADH RT++
Sbjct: 247 LVSVIQDKRSNYDTDVFVPLFQAIQKGTGAPDYQGRVGAEDVDGVDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY SE L  + GFF  LV+ VV+++GD FPE+K+
Sbjct: 307 IALADGGFPDNTGRGYVLRRILRRAVRYASEKLNGKPGFFATLVDTVVELLGDTFPEVKK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKA-AQDVQGKVLSGQDAFILWDTYGFPLDLTQ 477
              HI+ II  EE  F KTL +G     +  A+    KV+ G  A+ L+DTYGFP+DLT 
Sbjct: 367 DPQHIKNIINEEEQQFLKTLSRGRNLLNRTIAKLGDSKVIPGDVAWRLYDTYGFPVDLTG 426

Query: 478 LMAEERGLLVDIEGFNNA------MDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           LMAEE+ + +D+EG+  A      + + +E+S++A        + +D  A + L ++ V 
Sbjct: 427 LMAEEKNMTIDMEGYEKAKHQSYIISQGKEKSKTA-------TVDLDVHAISELQEKKVP 479

Query: 532 ATDDSFKFIW------------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYA 579
            T+D+FK+ +            F+     + A+   + F++ V  G E  ++L  ++FYA
Sbjct: 480 TTNDTFKYHYKAESTDPLAAYVFEPCTGKVLALRYNNAFVDEVQAGQECAVILDKTNFYA 539

Query: 580 EQGGQIFDEGFIEGL---FGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYD 636
           E GGQI+D+G++  +      F V  V   GG+V+HIG + EG  R  VG+EV C +D  
Sbjct: 540 ESGGQIYDQGYLLKVNDESTEFNVNLVYNRGGYVLHIG-VVEGVLR--VGDEVACHMDVV 596

Query: 637 RRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESI 696
           RR+L   NH+ TH LN +L +VLG   DQ+GS+V+PEKLRFDF++   +  E +   E +
Sbjct: 597 RRQLTMKNHSATHALNHSLLKVLGLDTDQRGSLVVPEKLRFDFTNKAAMTIEQVAEAERL 656

Query: 697 VNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEW 756
             E +K  + V++KE+ LA AK I GLR+VF EVYPDPVRV++ G  VEDL A+PE    
Sbjct: 657 TREVVKKNMQVYAKESKLASAKAIKGLRSVFDEVYPDPVRVISFGVPVEDLEANPEGVAG 716

Query: 757 LSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVD 816
              S E CGGTHL  +     F + +EE IAKGIRRI A+T   A KA +    LE E++
Sbjct: 717 TETSVEFCGGTHLHQSGHMVDFVITTEEAIAKGIRRIVALTGPEAIKALKKTELLEGELN 776

Query: 817 ------DASKIEGSLLE-------------------------KNQVRKAQKKVAEENLQK 845
                 DA K      E                         +NQ++  +K + ++    
Sbjct: 777 ALKATIDADKTGADSREHVKKIVELNEDVSQAVIPYVKKDEIRNQLKSLKKTLDDKERAA 836

Query: 846 AVKVATETAEA-----AASNGKPFCISRVEVGLDAAAVREAVLKV----IEQKGMPVMVF 896
              VAT   EA     AA+   PF + R+E   +  A+  A+ +V    +EQ  + V   
Sbjct: 837 RAAVATTVVEAAKELCAANKDAPFIVHRLEAFSNTKALDSALKEVRKLNVEQSALFV--- 893

Query: 897 STDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQV 956
           S+D  T K    A VP KS   K L+ +EW++  + P  G  G GK   A   G    +V
Sbjct: 894 SSDPDTKKIFCLASVP-KSAVEKGLKANEWIS-HISPSMGGKGGGKPESAQASGGAFDKV 951

Query: 957 TPAMDLAAEFAAMKL 971
              ++LA  FAA KL
Sbjct: 952 EEILELARAFAASKL 966


>gi|389741925|gb|EIM83113.1| hypothetical protein STEHIDRAFT_149395 [Stereum hirsutum FP-91666
           SS1]
          Length = 958

 Score =  847 bits (2188), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 443/908 (48%), Positives = 582/908 (64%), Gaps = 45/908 (4%)

Query: 58  WPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLS 117
           W ++K+R+ FF +F  ++H   +SS  +P  DPTLLFANAGMNQYK IFLGT DP + L+
Sbjct: 12  WTSSKIREEFFNYFRSRDHTFVRSSSTIPYEDPTLLFANAGMNQYKSIFLGTVDPLSDLA 71

Query: 118 KLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTK 177
           KL RA N+QKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK EA+ ++WELLT 
Sbjct: 72  KLRRAFNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAVHYSWELLTD 131

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWL-KFLPASRVLPFGCKDNFWEMGDTGPC 236
           V++LP DRLY TYF GD  AGL PD E R  WL + +    +LP   KDNFWEMG TGPC
Sbjct: 132 VFKLPKDRLYVTYFEGDPTAGLEPDLEVRQFWLDQGVADDHILPGNAKDNFWEMGATGPC 191

Query: 237 GPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGF 296
           GPCSEIHYDR G R+AA LVN DDP  +EIWN VFIQFNRE DGSLK LP KHVDTG+GF
Sbjct: 192 GPCSEIHYDRIGGRNAAHLVNQDDPDVLEIWNNVFIQFNREDDGSLKSLPLKHVDTGMGF 251

Query: 297 ERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRT 356
           ERL S++Q+K SNYDTDVF+PIF  +Q+ TG R Y GK G +D D +D AYRVVADH+RT
Sbjct: 252 ERLVSVIQDKRSNYDTDVFLPIFARVQELTGVRGYQGKFGEEDDDGIDTAYRVVADHVRT 311

Query: 357 LSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFPE 415
           L+FA++DG  P N GR YVLRRILRR  RY  + L    G FF+ L+ +VV  +G  FPE
Sbjct: 312 LTFALSDGGVPNNVGRGYVLRRILRRGARYARKKLGVTIGTFFSSLMPVVVDQLGATFPE 371

Query: 416 LKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTYGFP 472
           L ++   I+EI+  EE SF +TL +G    E++  +A++   + L+G+D + L+DTYGFP
Sbjct: 372 LTKKLPEIKEILDEEEESFSRTLDRGEKLFEQYAASARERGVRELNGKDVWRLYDTYGFP 431

Query: 473 LDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR-GVL 531
           +DLT+LMAEE GL ++   F  A   ++E S+++Q K A   + +D    A L K   V 
Sbjct: 432 VDLTRLMAEELGLTINEREFEAAQASSKEASKASQKKHANSVVKLDVHDLATLEKNTDVP 491

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIES---VVPGNEVGIVLASSSFYAEQGGQIFDE 588
            TDDS KF    + ++ +KAIY    F ++   V      GI+L  +SFYAE GGQ  D 
Sbjct: 492 KTDDSAKFS-VGNVEATVKAIYFSKSFFQTTSNVSEDTSFGIILDRTSFYAESGGQEHDT 550

Query: 589 G--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
           G   I+G F  F V NVQ+Y G+V+HIG L    G+ SVG++V+   D  RR  +  NHT
Sbjct: 551 GNIVIDG-FADFEVTNVQVYNGYVLHIGYLK--YGKLSVGDKVVASYDELRRWPLRNNHT 607

Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD 706
            TH+LNF LRE+LGDH+DQ+GS+V P KLRFDFSH   +    L +IES+ NE +K  + 
Sbjct: 608 ATHILNFCLREILGDHIDQRGSLVAPTKLRFDFSHKAQIPINELVKIESMANEWVKKNVK 667

Query: 707 VFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGG 766
           V+S+E  L  A+ I+GLRAVFGE YPDPVRVV++   V D+  D E+ +W S S E CGG
Sbjct: 668 VYSQELDLKTAQRISGLRAVFGESYPDPVRVVSLEYDVADIAKDVESPKWRSTSIEFCGG 727

Query: 767 THLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEG--- 823
           TH++ T + + F ++ E GIAKG RRI AVT   A +    A +L + +    K+ G   
Sbjct: 728 THVARTGDIKQFVVIEESGIAKGTRRIIAVTGHEAQEVTRQAETLRERLHQVEKLAGNTK 787

Query: 824 ----------------SLLEKNQVRKA--------QKKVAEENLQKAVKVATETAEAAAS 859
                           SL+EK ++R           K++ E++L        +  +    
Sbjct: 788 DTALKTLTVELSQADISLIEKTRMRDHLAALRKTFDKEIKEKDLAANKAAVEDVVKYFEE 847

Query: 860 N-GKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQS 918
           N  +P  I+ ++V  +   ++  VL+  ++ G  V VFS D    K      +PE S ++
Sbjct: 848 NPNEPAYITVLDVEGNTKILQAVVLQA-KKLGKAVYVFSVDANAGKVAHANHIPE-SYRA 905

Query: 919 KQLEVSEW 926
           + L+   W
Sbjct: 906 RGLDARTW 913


>gi|380028001|ref|XP_003697700.1| PREDICTED: alanine--tRNA ligase, cytoplasmic-like [Apis florea]
          Length = 1192

 Score =  846 bits (2186), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 453/967 (46%), Positives = 595/967 (61%), Gaps = 61/967 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R  +  FF++K H    SS  +P +DPTLLF NAGMNQ+KPIFLG  DPN+ ++KL
Sbjct: 7   AKQIRQAYIDFFKNKGHEYVHSSSTIPHDDPTLLFTNAGMNQFKPIFLGIVDPNSDMAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            RA N+QKCIRAGGKHNDLDDVGKD YHHTFFEM+GNWSFGDYFK E   WAWE LT   
Sbjct: 67  VRAVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMMGNWSFGDYFKKEICTWAWEFLTVKL 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
           +L +DRLY TYFGGDEK  L PD E + IWL   L  + +LP   KDNFWEMG+TGPCGP
Sbjct: 127 KLSSDRLYVTYFGGDEKNNLKPDEECKQIWLSLGLSPTHILPGNMKDNFWEMGETGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
            SEIHYDR GNR+AA LVN DDP  +EIWN+VFIQFNRE++G+LK LP KH+D GLG ER
Sbjct: 187 SSEIHYDRIGNREAAHLVNQDDPDVLEIWNLVFIQFNRENNGNLKLLPKKHIDCGLGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L SI+QNK +NYDTD+FMP+FDAIQ+ T A  Y GKVG +D D +DMAYRV+ADH RT++
Sbjct: 247 LVSIIQNKSANYDTDLFMPLFDAIQKGTRAPSYQGKVGKEDKDGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY  E L A+ GFF  LVN+VV ++GDVFPE+ +
Sbjct: 307 IALADGGIPDNTGRGYVLRRILRRAVRYAIEKLNAKPGFFGSLVNVVVDLLGDVFPEVTK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ-GKVLSGQDAFILWDTYGFPLDLTQ 477
              HI +II  EE  F KTL +G     +    ++   VL G  A+ L+DTYGFP DLTQ
Sbjct: 367 DPQHIIDIINEEETQFLKTLSRGRNLLNRTIVKLESSNVLPGDVAWRLYDTYGFPFDLTQ 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSF 537
           LM EE+GL VDI G+  A  +A+  S++ ++ +    I +D  A   L  + +  T+D  
Sbjct: 427 LMVEEKGLKVDIIGYEEAKKQAQLISQN-KSGEVDDQINLDVHAITELQNKKIKPTNDIP 485

Query: 538 KFIW------------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
           K+ +            F    S + A+     F+  V  G EVGI+L  ++FYAEQGGQ+
Sbjct: 486 KYNYKVINNKICEEYEFAPCFSTVIALRRAKTFVNEVSSGEEVGILLDQTNFYAEQGGQM 545

Query: 586 FDEGFIEGLFG---SFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIA 642
           +DEGF+  +       +++NVQ+ GG+V+HIG +++  G+    ++V   +D  RR+L+ 
Sbjct: 546 YDEGFLTKIDDEDTEVHIKNVQVRGGYVLHIGIVSQ--GKLKKNDKVFSNIDTTRRRLLM 603

Query: 643 PNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIK 702
            NHT TH LN+ALRE+LG  VDQKGS+V P++LRFDF++   +  E +R++E I N  I 
Sbjct: 604 SNHTATHALNYALREILGTEVDQKGSLVAPDRLRFDFTNKGAMTTEQIRKVEEITNNIIN 663

Query: 703 AELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAE 762
               V++KE  L  AK I GLRA+F E YPDPVRVV+IG  VEDL  +P +   L  S E
Sbjct: 664 ENKMVYAKECNLGLAKTIQGLRAMFEETYPDPVRVVSIGIPVEDLEKNPLSSGALKTSVE 723

Query: 763 LCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV------- 815
            CGGTHL  T     F ++SEE IAKGIRRI A+T   A KA +    L+  +       
Sbjct: 724 FCGGTHLHYTGHIRNFVIVSEEAIAKGIRRIVALTGPEAVKAQKKTSMLQNYLDELQITI 783

Query: 816 --------------------DDASKIEGSLLEKNQVRKAQKKVAE--ENLQKAVKVATET 853
                               DD S    S  +K+++RK  K + +  ++ ++A+K A   
Sbjct: 784 EADKDSINTKEHVKKIVELTDDVSHAIISSWKKDKIRKMLKDLKKILDDKERAIKTAIAN 843

Query: 854 ----AEAAASNGKPFCISRVEVGLDAAAVREAV---LKVIEQKG--MPVMVFSTDETTNK 904
                          C+  VEV L A +  +A+   LK I         ++ S D    K
Sbjct: 844 IVLDNIQQIIQQNIGCLVLVEV-LQAYSNTKALDSALKKIRTISPETSALLISIDPDAKK 902

Query: 905 AVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAA 964
               + V  KS  SK L+ +EW+   +  ++G+ G GK   A   GT+ + +T  +  A 
Sbjct: 903 IFALSSV-SKSAISKGLKANEWIQEIVPFMEGKGG-GKSESAQASGTNISCITKLIYTAK 960

Query: 965 EFAAMKL 971
            FA  KL
Sbjct: 961 NFANSKL 967


>gi|290986366|ref|XP_002675895.1| alanyl-tRNA synthetase [Naegleria gruberi]
 gi|284089494|gb|EFC43151.1| alanyl-tRNA synthetase [Naegleria gruberi]
          Length = 957

 Score =  846 bits (2186), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 453/953 (47%), Positives = 602/953 (63%), Gaps = 55/953 (5%)

Query: 58  WPATKVRDTFFKFFEDK-NHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           W + ++R  F +FFE K  H    SS VVP  DPTLLF NAGMNQ+K IFLG A P++ L
Sbjct: 15  WTSKEIRKQFVEFFEKKYEHTFVPSSSVVPHEDPTLLFTNAGMNQFKAIFLGQASPDSSL 74

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
           +KL RA N+QKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK EAI WAWELLT
Sbjct: 75  AKLKRAANSQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKREAITWAWELLT 134

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPC 236
           +VY L  DRLY TYFGG+EK  L  D EA+ IW +F+P   +LP   KDNFWEMGDTGPC
Sbjct: 135 EVYGLEKDRLYVTYFGGNEKLNLPADEEAKQIWGQFVPDDHILPGSMKDNFWEMGDTGPC 194

Query: 237 GPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGF 296
           GPCSEIHYDR G R+AA LVN DDP  +EIWN VF++FNR+ D +L+ LPAKHVDTG+G 
Sbjct: 195 GPCSEIHYDRIGGRNAAHLVNMDDPNVLEIWNNVFMEFNRKEDQTLEYLPAKHVDTGMGL 254

Query: 297 ERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRT 356
           ERL SILQNKMSNYDTDVFMPIF+AIQ+ TG+RPY+GK+GA+D D +D AYRV+ADHIRT
Sbjct: 255 ERLVSILQNKMSNYDTDVFMPIFEAIQKETGSRPYTGKLGAEDVDHIDTAYRVIADHIRT 314

Query: 357 LSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPEL 416
           L  A++DG  P N GR YVLRRI+RRAVR+G E + A+ GF   L + VV++MGD FPEL
Sbjct: 315 LVIALSDGGYPDNTGRGYVLRRIVRRAVRFG-EFMNAKKGFLTRLASCVVELMGDFFPEL 373

Query: 417 KQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK---VLSGQDAFILWDTYGFPL 473
           K+    + E+I +EE  F KTL  G++ F + A+ ++     V+SG DAF L+ TYGFP+
Sbjct: 374 KKNSEKVEELIQSEEVLFAKTLRVGLKFFNRIAEKMKSNGESVVSGPDAFKLYATYGFPV 433

Query: 474 DLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR-GVLA 532
           DLT +MA+E+G+ VD+  +   M+  +  + S   KQ    + +    T  L     +  
Sbjct: 434 DLTLIMAQEQGMTVDMVEYKKEME--KHATASQGTKQEATDMKLGVIETDKLQNELKIEP 491

Query: 533 TDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNE---VGIVLASSSFYAEQGGQIFDEG 589
           T D  K++W      V+      S F+E +    E   +GI+L  ++FYAE GGQ  D G
Sbjct: 492 TQDDIKYVWENIQAKVVAIFSESSGFVEELNTECEEVNIGIILDQTNFYAEGGGQAPDNG 551

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIGSLTEG--AGRFSVGEEVICKVDYDRRKLIAPNHTC 647
            +        V NVQ + G+++HI +++E   AG  +VG  V  +V+Y+RR+ IA NHT 
Sbjct: 552 VLRIGETELKVVNVQKFAGYILHIVNVSESKLAGNVTVGTTVSSEVNYERREPIAANHTS 611

Query: 648 THMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDV 707
           THMLNFALR+VLG   DQ+GS+V  E+L FDFS  K    E +  +E IVN+ I A+  V
Sbjct: 612 THMLNFALRKVLGTDCDQQGSIVKEEELCFDFSAAKAPSVEQVAEVEKIVNDLIVADHPV 671

Query: 708 FSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGT 767
           FSK      A  INGLRA+F   Y + VRVV+IG+  + ++ D  N++W  IS E CGGT
Sbjct: 672 FSKVQERDAAYEINGLRAMFSANYGEQVRVVSIGQDSDSIMTDRSNEKWRLISVEFCGGT 731

Query: 768 HLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSL-- 825
           HL  T +A+ F +LSE+ I+ G RRI A+T   A +A E A     ++D+  K+   L  
Sbjct: 732 HLKQTSQAQTFVILSEKSISTGKRRIVALTRKAAKEAVERAQKFSVKIDELEKLSDELFC 791

Query: 826 ---------------------------LE--KNQVRKAQKKVAEENLQKAVKVATETAEA 856
                                      LE  + +VRK Q+   +++ +KA ++ ++  E+
Sbjct: 792 PRYYELTSELTLLTDIPLLSKKAFEKRLEACQTKVRKIQQSQKKDDAEKANQLISQLKES 851

Query: 857 AASNGKPFCISRVEVGLDAAAVREAVLKVIEQ-KGMPVMVFS-TDETTNKAVVCAGVPEK 914
                    + ++E G D   V+    KVI+    +PV + S  D+ T   +V A VP+ 
Sbjct: 852 IEQKSLKSLVYQLEDGSDQKFVK----KVIDALTTIPVCLISKADDKT--IIVLASVPQ- 904

Query: 915 SDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFA 967
            +Q+  L  + W+T   + + G+ G GK   A G+G+D ++V  A+ LA E A
Sbjct: 905 -EQTATLSANTWVTEVCKVVSGKGG-GKPIFAQGRGSDVSKVAEAVKLAEEMA 955


>gi|395508649|ref|XP_003758622.1| PREDICTED: alanine--tRNA ligase, cytoplasmic [Sarcophilus harrisii]
          Length = 968

 Score =  846 bits (2186), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 464/967 (47%), Positives = 610/967 (63%), Gaps = 65/967 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A+++R  F  FF+   H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  ++KL
Sbjct: 7   ASEIRQRFIDFFKRNQHTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A + A ELLT+ +
Sbjct: 67  SRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +P +RLY TYFGG+E AGL PD E + IW    L  S++LP   KDNFWEMGDTGPCGP
Sbjct: 127 GIPVNRLYVTYFGGNEAAGLEPDLECKQIWQNLGLEDSKILPGNMKDNFWEMGDTGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G+RDAA LVN DDP  +EIWN+VFIQFNRE+DGSLKPLP K +DTG+G ER
Sbjct: 187 CSEIHYDRIGDRDAAHLVNQDDPNVLEIWNLVFIQFNRETDGSLKPLPKKSIDTGMGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+F+P F+AIQ+ TG R Y+G+VGADD D +DMAYRV+ADH RTL+
Sbjct: 247 LVSVLQNKMSNYDTDLFVPYFEAIQKGTGVRQYTGQVGADDVDGIDMAYRVLADHARTLT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRA+RY  E L A+ GFF  LV++VV+ +GD FPELK+
Sbjct: 307 VALADGGRPDNTGRGYVLRRILRRAIRYSHEKLNAKRGFFATLVDVVVQSLGDAFPELKK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
               +++II  EE  F KTL +G     +  Q +   K + G  A++L+DTYGFP+DLT 
Sbjct: 367 DPDMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDCKTIPGDTAWLLYDTYGFPVDLTG 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
           L+AEE+GL+VD+ GF      A+ +S   Q K AGG   I++D  A   L  +G+  TDD
Sbjct: 427 LIAEEKGLVVDMNGFEEERKLAQLKS---QGKGAGGEDHIMLDIYAIEELRVKGLKVTDD 483

Query: 536 SFKFIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           S K+ +         F++  + ++A+     F++ V  G E G+VL  + FYAEQGGQI+
Sbjct: 484 SLKYNYRSDSSGTYEFENPMATVQALRREKMFVDEVSTGQECGVVLDKTCFYAEQGGQIY 543

Query: 587 DEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           DEGF+     S      F V++ Q+ GG+V+HIG++    G   VG+ V   +D  RR+ 
Sbjct: 544 DEGFLVKEDDSSEDKTEFTVKDAQVRGGYVLHIGTVY---GSLRVGDRVRLFIDEPRRRP 600

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           +  NHT TH+LNFALR VLG+  DQ+GS+V P++LRFDF+    +  + ++  E I N  
Sbjct: 601 VMSNHTATHILNFALRSVLGE-ADQRGSLVAPDRLRFDFTAKAAMSTQQIKETEKIANGM 659

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I+A   V++++  LA AK I GLRAVF E YPDPVRVV+IG  V  LL DP        S
Sbjct: 660 IEAAKPVYAQDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGIPVTKLLDDPSGPAGSLTS 719

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDD-AS 819
            E CGGTHL N+  A A  ++SEE IAKGIRRI AVT   A KA   A SL+  + +  +
Sbjct: 720 VEFCGGTHLQNSSHAGALVIVSEEAIAKGIRRIVAVTGTEAQKALRKADSLKTSLSELEA 779

Query: 820 KIE----------------GSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASN--- 860
           K++                G LL    V + QK    ENL+   K+  +   A+ ++   
Sbjct: 780 KVKAQTAPNKDLQREISDFGELLATTVVPQWQKDELRENLKALKKIMDDLDRASKADVQK 839

Query: 861 --------------GKPFCISRVEVGLDAAAVREAVLKVIEQKG--MPVMVFSTDETTNK 904
                          +P  I  +E G  A A+ EA LK+ +        M+F+ D   NK
Sbjct: 840 RVLERTKQLIESQPNQPLVIMEMESGASAKALNEA-LKLFKTHSPETSAMLFTVDNEANK 898

Query: 905 AVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAA 964
            +    VP+ +  ++ L+ SEW+      + G+ G GK   A   G +   +  A+ LA 
Sbjct: 899 IICLCQVPQNA-ANRGLKASEWVQQVSGLMDGK-GGGKDVSAQATGKNVGCLQEALRLAT 956

Query: 965 EFAAMKL 971
            FA ++L
Sbjct: 957 SFAHLRL 963


>gi|226288201|gb|EEH43713.1| alanyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18]
          Length = 962

 Score =  846 bits (2186), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 462/956 (48%), Positives = 607/956 (63%), Gaps = 56/956 (5%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           EWPA +VR+ F  FF+D  H    SS VVP++DPTLLFANAGMNQYK IFLGT +PN+  
Sbjct: 11  EWPALRVRNAFLDFFKDNGHTFVPSSSVVPLSDPTLLFANAGMNQYKAIFLGTVEPNSDF 70

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
           ++L RA NTQKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK EAI ++W+LLT
Sbjct: 71  AQLKRAHNTQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIRYSWDLLT 130

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
           KVY L  DRLY TYF G+  AG+ PD EARD+WL   +    +L    KDNFWEMG+ GP
Sbjct: 131 KVYGLDPDRLYVTYFEGNPDAGIEPDLEARDLWLSVGVAEDHLLSGNMKDNFWEMGEQGP 190

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPCSEIHYDR G R+A+ LVN DDP  +EIWN VFIQ+NRE D SL+PLP KHVDTG+G
Sbjct: 191 CGPCSEIHYDRIGGRNASHLVNQDDPNVLEIWNNVFIQYNREQDKSLRPLPNKHVDTGMG 250

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
           +ERL SILQNK SNYDTDVF P+F+ I++ TG+RPY+GK   +D D VD AYRVVADHIR
Sbjct: 251 YERLVSILQNKSSNYDTDVFTPLFEKIREITGSRPYTGKFHEEDVDGVDTAYRVVADHIR 310

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQ-DGFFNGLVNIVVKVMGDVFP 414
           TL+FAI+DG+ P NEGR YV+RR+LRR  RY  + L  +  GFF+ +V  +V+ MGD+FP
Sbjct: 311 TLTFAISDGAVPNNEGRGYVVRRVLRRGARYARKYLNVEIGGFFSQIVPTLVEQMGDMFP 370

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK---VLSGQDAFILWDTYGF 471
           E+K++   + EI+  EE SF KTL +G   F++ A   + K    L G D + L+DT+GF
Sbjct: 371 EIKRKATDVMEILDEEEISFAKTLDRGERLFEEYALQAKQKGLDRLHGADVWRLYDTFGF 430

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSA---QNKQAGGAIVMDADATAALHKR 528
           P+DLTQLMAEERGL +D    N   +EAR R++ A   Q KQ    + +       L   
Sbjct: 431 PVDLTQLMAEERGLKID----NGEFEEARLRAKEASKGQGKQTKDVVKLTVHDLGLLETM 486

Query: 529 -GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIES---VVPGNEVGIVLASSSFYAEQGGQ 584
             V  TDDS KF    +  S IKAIY   +F++S   +  G + GI+L  ++FYAEQGGQ
Sbjct: 487 DDVPKTDDSAKF-GRGNITSQIKAIYHNKKFVDSSKDIPEGEQFGIILDRTNFYAEQGGQ 545

Query: 585 IFDEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIA 642
            +D G   I+G      V +VQ+YGG+V+H G +  G+  F++ + VI + D  RR  I 
Sbjct: 546 EYDTGKIIIDGK-AELAVEDVQVYGGYVLHTGFMKYGS--FNINDSVIAEYDELRRWPIR 602

Query: 643 PNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIK 702
            NHT TH+LNFALR+VLGD V+QKGS+V  EKLRFDFSH   V    L  IE I  + I+
Sbjct: 603 NNHTGTHILNFALRKVLGDGVEQKGSLVAAEKLRFDFSHKSAVSDSDLEEIERISTDYIR 662

Query: 703 AELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAE 762
               V+ K+  L+ A+ I G+RAVFGE YPDPVRVV++G ++E++L D  +  W  IS E
Sbjct: 663 QNCAVYGKDVPLSIAREITGVRAVFGETYPDPVRVVSVGVELEEILKDVHDPRWKEISIE 722

Query: 763 LCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAY-------------KAFEAA- 808
            CGGTH+  T + +   +L E GIAKGIRRI AVT   A+             K FE   
Sbjct: 723 FCGGTHVQKTGDIKDLVILEESGIAKGIRRIIAVTGEEAHEVQRIAKEFGERLKRFEKME 782

Query: 809 CSLEKEVD------DASKIEGSLLEKNQVR-----------KAQKKVAEENLQKAVKVAT 851
              +KE++      D +++  S +EK Q R           + QK   +   +KA+    
Sbjct: 783 LGPKKEMEAKLLQVDLNQLTISAVEKAQFREKFTQIHKKVLEGQKAAQKLESKKALDAIM 842

Query: 852 ETAEAAASNGKPFCISRVEVGLDAAAVREAVLKV-IEQKGMPVMVFSTDETTNKAVVCAG 910
              +A  +   P  + ++ +  +A AV +++  V  + +   + VF+ D+   K V    
Sbjct: 843 GYFQAPENKDAPHLVLQLPISANAKAVSDSLNFVKTKMQDKSLYVFAADKEAGKIVHGCH 902

Query: 911 VPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEF 966
           V E   Q +    ++W  +    + GR G GKG ++ G GTDA ++  A+  A E+
Sbjct: 903 VAENLSQ-QGASPNDWANSVANVVGGRAG-GKGPISIGNGTDAEKLDDAIKAATEY 956


>gi|71022301|ref|XP_761380.1| hypothetical protein UM05233.1 [Ustilago maydis 521]
 gi|46097613|gb|EAK82846.1| hypothetical protein UM05233.1 [Ustilago maydis 521]
          Length = 990

 Score =  846 bits (2185), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 471/967 (48%), Positives = 599/967 (61%), Gaps = 59/967 (6%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           +WPATKVRDTF  +F+++ H    SS  +P +DPTLLFANAGMNQYKPIFLG ADPN+  
Sbjct: 21  DWPATKVRDTFTGYFQERKHTFVPSSSTIPYDDPTLLFANAGMNQYKPIFLGIADPNSSF 80

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
             + RA N+QKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK EAIE AWELLT
Sbjct: 81  GSMKRAVNSQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAIEMAWELLT 140

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
           KVY LP DRLY TYF GD K GL PD EARD+WLK  +    +L    KDNFWEMG TGP
Sbjct: 141 KVYGLPKDRLYVTYFEGDAKQGLEPDLEARDLWLKVGVDEDHILTGDAKDNFWEMGATGP 200

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPCSEIHYDR G R+AA LVN DDP  IEIWN VF+QFNRE DGSL+PLPAKH+DTG+G
Sbjct: 201 CGPCSEIHYDRIGGRNAADLVNKDDPNVIEIWNNVFMQFNREDDGSLRPLPAKHIDTGMG 260

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
           FERL SILQ+K SNYDTDVF PIF+ IQQ TGAR Y+GK+GA+D D +D AYRVVADH+R
Sbjct: 261 FERLVSILQDKPSNYDTDVFTPIFNKIQQLTGARAYTGKLGAEDKDGIDTAYRVVADHVR 320

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFP 414
           TL+FAI+DG  P  +GR YVLRRILRR  RY  +  +   G FF+ LV  +V+ MG  FP
Sbjct: 321 TLTFAISDGGVPDRDGRGYVLRRILRRGTRYVRKYFQVPIGSFFSQLVPTLVEQMGHFFP 380

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTYGF 471
           E+ ++   ++ I+  EEASF +TL +G    E++   A+    K LSG D + L+DT+GF
Sbjct: 381 EITKKVDDVKAILDEEEASFARTLDRGERLFEEYAAKAKAAGNKQLSGNDVWKLYDTFGF 440

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK-RGV 530
           P+DLT +MAEE+GL V+ + F  A  E++E S++   K    A+  D      L K   V
Sbjct: 441 PVDLTLIMAEEQGLGVNEKEFEAAQAESKEISKAGGKKGETEAVKFDVHDLGHLEKDSSV 500

Query: 531 LATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVP----GNEVGIVLASSSFYAEQGGQIF 586
             T D FK+      K+ +KAIY    F+++           GI+L  +  YAE GGQ  
Sbjct: 501 PKTQDDFKY-GVNTVKASVKAIYQDHAFVDNTSKIGDRAKNFGILLDRTCLYAESGGQQA 559

Query: 587 DEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           D G   I+G    F V + Q++ G+V+HIG L    G   + +EV+   D  RR  +  N
Sbjct: 560 DTGSIVIDGK-TEFVVEDAQVFSGYVLHIGHLKH--GELGLNDEVVVSYDQSRRGPLQSN 616

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           HT TH+LNF LREVLGDH+DQKGS+V P KLRFDFSH + V+ + L++IE I  + IK +
Sbjct: 617 HTATHILNFGLREVLGDHIDQKGSLVAPTKLRFDFSHKQGVNVQELKKIEDISIDWIKRD 676

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
           + V+SKE  L  A+ I GLRAVFGE YP+PVRVV +   ++ +  D EN +W   S E C
Sbjct: 677 VGVYSKEMPLDTAQKIPGLRAVFGEAYPNPVRVVTLEYDLDTIADDIENTKWRGTSVEFC 736

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLE---KEVD---DA 818
           GGTH++ T E   F +  E GIAKGIRRI AVT   A    + A   E    E+D   + 
Sbjct: 737 GGTHVAKTGEIGEFVITEESGIAKGIRRIIAVTGNEAAAVTKVADDAEVRLAEIDAIQEQ 796

Query: 819 SKIEGSL---------LEKNQVRKAQ--------KKVAEENLQKAVKVATETAEAAAS-- 859
           S  + +L         L+ + VRKA         +K  +  L+   K  T+   +A    
Sbjct: 797 SAKDAALKAFGTQLAQLDMSVVRKASLNETFAAIRKKLDSGLKAKDKADTKLVVSAVEEH 856

Query: 860 -NGKP--FC-ISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAG----- 910
              KP   C I + +VG +  A++ A L  +++      +FS +   N   V  G     
Sbjct: 857 FKTKPNSTCFIHKFDVGSNMKALQSA-LNTVKKMDKTAYLFSQELDVNGVKVADGNAIKA 915

Query: 911 ------VPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQ-VTPAMDLA 963
                    K DQ+K L   EW+  + Q + G+ G GK   A G G    Q +  A++ A
Sbjct: 916 KVVHVAYVSKHDQAKGLNAKEWIETSAQHVGGKGG-GKTDSAQGIGEMGGQALEDAVEAA 974

Query: 964 AEFAAMK 970
             F  +K
Sbjct: 975 KRFYILK 981


>gi|443893907|dbj|GAC71363.1| alanyl-trna synthetase [Pseudozyma antarctica T-34]
          Length = 1056

 Score =  845 bits (2184), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 473/975 (48%), Positives = 591/975 (60%), Gaps = 75/975 (7%)

Query: 57   EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
            +WPATKVRDTF  +F+++ H    SS  +P +DPTLLFANAGMNQYKPIFLG ADPN+  
Sbjct: 87   DWPATKVRDTFTAYFKERQHTFVPSSSTIPYDDPTLLFANAGMNQYKPIFLGIADPNSAF 146

Query: 117  SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
              + RA N+QKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK EAI  AWELLT
Sbjct: 147  GSMKRAVNSQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKPEAIAMAWELLT 206

Query: 177  KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
            KVY LP DRLY TYF GD K GL PD EARD+WLK  + A  +L    KDNFWEMG TGP
Sbjct: 207  KVYGLPKDRLYVTYFEGDAKQGLEPDTEARDLWLKVGVDADHILTGDAKDNFWEMGATGP 266

Query: 236  CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
            CGPCSEIHYDR G R+AA LVN DDP  IEIWN VF+QFNRE DGSL+PLPAKH+DTG+G
Sbjct: 267  CGPCSEIHYDRIGGRNAAHLVNMDDPNVIEIWNNVFMQFNREDDGSLRPLPAKHIDTGMG 326

Query: 296  FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
            FERL SILQ+K SNYDTDVF PIF  IQQ TGAR Y+GK+GA D D +D AYRVVADH+R
Sbjct: 327  FERLVSILQDKPSNYDTDVFTPIFAKIQQLTGARAYTGKLGAQDTDGIDTAYRVVADHVR 386

Query: 356  TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFP 414
            TL+FAI+DG  P  +GR YVLRRILRR  RY  +  +   G FF+ LV  +V  MG  FP
Sbjct: 387  TLTFAISDGGVPDRDGRGYVLRRILRRGTRYVRKYFQVPIGSFFSQLVPTLVDQMGHFFP 446

Query: 415  ELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTYGF 471
            E+ ++   ++ I+  EEASF +TL +G    E++   A+    K LSG D + L+DT+GF
Sbjct: 447  EITKKIDDVKAILDEEEASFARTLDRGEKLFEEYAAKAKAAGSKQLSGADVWKLYDTFGF 506

Query: 472  PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK-RGV 530
            P+DLT +MAEE GL V+ + F  A  E++E S++   K    A+  D      L K   V
Sbjct: 507  PVDLTLIMAEEHGLGVNEKEFEAAQAESKELSKAGGKKSEAEAVKFDVHDLGHLEKDDSV 566

Query: 531  LATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVP----GNEVGIVLASSSFYAEQGGQIF 586
              T D FK+       + +KAIY    F              GI+L  +  YAE GGQ  
Sbjct: 567  PKTQDDFKYS-LNSVDATVKAIYQDHAFFPETAKVADRAKNFGILLDRTCLYAESGGQQA 625

Query: 587  DEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
            D G   I+G    F V + Q++ G+V+HIG L    G  ++G++V    D  RR  +  N
Sbjct: 626  DTGSITIDGK-SQFVVEDAQVFSGYVLHIGHLVR--GELALGDKVTVSYDQSRRAPLQSN 682

Query: 645  HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
            HT TH+LNF LREVLGDH+DQKGS+V P KLRFDFSH + V+ + L++IE I  + IK  
Sbjct: 683  HTATHILNFGLREVLGDHIDQKGSLVAPAKLRFDFSHKQGVNVQELKKIEHISVDWIKRN 742

Query: 705  LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
            + VFSKE  L  A+ I GLRAVFGE YP+PVRVV +   ++ + +D EN  W S S E C
Sbjct: 743  VGVFSKEMELDTAQKIPGLRAVFGEAYPNPVRVVTLEHDLDTIASDLENPRWRSTSVEFC 802

Query: 765  GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGS 824
            GGTH++ T E   F +  E GIAKGIRRI AVT        + A S+ +  D+A    G 
Sbjct: 803  GGTHVAKTGEIGDFVITEESGIAKGIRRIIAVTG-------DEAASVSRVADEAEARLGE 855

Query: 825  L----------------------LEKNQVRKAQ--------KKVAEENLQ-------KAV 847
            +                      L+ + VRKA         +K  +  L+       KAV
Sbjct: 856  IDAIGEAAAKDAALKAFGTHLAQLDMSVVRKAALNERFSAIRKKLDAGLKAKDKADTKAV 915

Query: 848  KVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKA-- 905
              A E       N   F I + +VG +  A++ A +  +++      +FS +   N A  
Sbjct: 916  VDAVEAHFKEQPNATSF-IHKFDVGSNMKALQTA-MNTLKKMDKTAYLFSQELDVNGAKV 973

Query: 906  ---------VVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQ- 955
                     VV A    K DQSK L   EW+  + Q + G+ G GK   A G G    Q 
Sbjct: 974  AGGNALQAKVVHAAYVSKHDQSKGLNAKEWIETSAQHVGGKGG-GKQDSAQGVGEMGGQA 1032

Query: 956  VTPAMDLAAEFAAMK 970
            +  A++ A  F  +K
Sbjct: 1033 LDDAIEAAKRFYTLK 1047


>gi|195115683|ref|XP_002002386.1| GI12987 [Drosophila mojavensis]
 gi|193912961|gb|EDW11828.1| GI12987 [Drosophila mojavensis]
          Length = 967

 Score =  845 bits (2182), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 451/971 (46%), Positives = 594/971 (61%), Gaps = 69/971 (7%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A +VRD +  FF+++ H+   SS  +P++DPTLLFANAGMNQ+KPIFLG ADPN+++SK 
Sbjct: 6   AKEVRDAYLNFFKEQKHIYVHSSSTIPLDDPTLLFANAGMNQFKPIFLGIADPNSEMSKW 65

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFGDYFK E   WAWE LT   
Sbjct: 66  VRVVNTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKEICSWAWEFLTDRL 125

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            LP DRLY TYFGGD   GL PD E + +WL   L    +LP   KDNFWEMG+TGPCGP
Sbjct: 126 NLPKDRLYVTYFGGDAANGLEPDLECKQMWLDLGLKPEHILPGSMKDNFWEMGETGPCGP 185

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSE+H+DR G R    LVN DDP  +EIWN+VFIQ+NRESDGSLK LP KH+D G+GFER
Sbjct: 186 CSELHFDRIGGRSVPELVNMDDPDVLEIWNLVFIQYNRESDGSLKQLPKKHIDCGMGFER 245

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S++QNK SNYDTD+F+P+FDAIQ  TGA  Y G+VGADDAD +DMAYRV+ADH RT++
Sbjct: 246 LVSVIQNKRSNYDTDLFVPLFDAIQAGTGAPAYQGRVGADDADGIDMAYRVLADHARTIT 305

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY +E L A+ GFF  LV  VV+++GD FPE+K+
Sbjct: 306 IALADGGNPDNTGRGYVLRRILRRAVRYATEKLNAKPGFFATLVTTVVELLGDAFPEVKK 365

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV--QGKVLSGQDAFILWDTYGFPLDLT 476
              HI +II  EE  F KTL +G     +  + +    K + G  A+ L+DTYGFP+DLT
Sbjct: 366 DPQHIMDIINEEEQQFLKTLSRGRNLLNRTIEKLGADQKTIPGDVAWRLYDTYGFPVDLT 425

Query: 477 QLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA-----IVMDADATAALHKRGVL 531
           QLMAEE+ L +D++G++ A      +  S    Q  GA     I +D  A + L ++GV 
Sbjct: 426 QLMAEEKSLQIDMDGYDAA------KHNSYILSQGKGASKIDEINLDVHAISELQEKGVP 479

Query: 532 ATDDSFKFIW------------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYA 579
            T+DSFK+I+            F D  S I A+   ++F++ +  G + GIVL  ++FYA
Sbjct: 480 PTNDSFKYIYEAESNERDSAYKFSDCTSKIVALRYENKFVQEITSGQKAGIVLDKTNFYA 539

Query: 580 EQGGQIFDEGFIEGL---FGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYD 636
           E GGQIFD+G +  L      F V  V   GG+++HIG +    G  +VG+EV   +D +
Sbjct: 540 ESGGQIFDQGALVKLNDEANEFLVDRVYNRGGYILHIGVVE---GTLAVGDEVQLHIDVE 596

Query: 637 RRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESI 696
           RR L   NH+ TH LN  L +VLG   +QKGS+V+PEKLRFDF+    +  E + + E +
Sbjct: 597 RRWLTMKNHSATHALNHCLLQVLGKDTEQKGSLVVPEKLRFDFNSKAAMTIEQVAKTEQL 656

Query: 697 VNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEW 756
             + +  E+ +++KE+ LA AK I GLR+VF EVYPDPVRV++ G  V+ L + P+++  
Sbjct: 657 TRDMVYKEMPIYAKESQLALAKRIRGLRSVFDEVYPDPVRVISFGVPVDQLESQPDSEAG 716

Query: 757 LSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVD 816
              S E CGGTHL N+     F + SEE IAKGIRRI A+T   A KA + +   EKE+ 
Sbjct: 717 EQTSVEFCGGTHLRNSGHIMDFVISSEEAIAKGIRRIVALTGPEALKALKKSEGFEKEIS 776

Query: 817 --------DASKIEGSLLEKNQVRKAQ----------KKVAEENLQKAVKVATETAEAA- 857
                   D +  +  L  K  V   +          KK    NL K++K   +  E A 
Sbjct: 777 TLKATIEADKTGKDSKLYVKQIVELTEQISHATIPYVKKDEMRNLLKSLKKTLDDKERAL 836

Query: 858 --------ASNGKPFC---------ISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDE 900
                       K  C         + ++E   +  A+  A+ +V  Q      +F + +
Sbjct: 837 RAAVSVTVVEQAKALCEANPKANVLVQQLEAYNNTKALDAALKQVRSQLPDAAAMFVSVD 896

Query: 901 TTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAM 960
             +K V C     KS   K L+ +EW+   + P+ G  G GK   A   G++  +V   +
Sbjct: 897 ADSKKVFCLCSVPKSAVEKGLKANEWVQ-HVSPVLGGKGGGKPESAQASGSNFERVDEIV 955

Query: 961 DLAAEFAAMKL 971
            LA++FA  KL
Sbjct: 956 QLASKFAQAKL 966


>gi|405978504|gb|EKC42884.1| Alanyl-tRNA synthetase, cytoplasmic [Crassostrea gigas]
          Length = 965

 Score =  844 bits (2180), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 452/966 (46%), Positives = 597/966 (61%), Gaps = 66/966 (6%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R+ F  FF++K H+   SS VVP++DPTLLF NAGMNQ+KPIFL   DPN+ ++K  R
Sbjct: 9   EIRNLFVDFFKEKEHLYVHSSSVVPLDDPTLLFTNAGMNQFKPIFLEIVDPNSDMAKYVR 68

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A N+QKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFGDYFK E   WAWE LT+   L
Sbjct: 69  AANSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKTECCGWAWEFLTERVGL 128

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGPCS 240
           P +RLY TYFGG+EK  L PD+E ++IWL   +PA RVLPFG KDNFWEMG+TGPCGPC+
Sbjct: 129 PKERLYVTYFGGNEKFNLKPDDETKNIWLNLGVPAERVLPFGMKDNFWEMGETGPCGPCT 188

Query: 241 EIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLT 300
           EIHYD+ G RDA +LVN DDP  IEIWN+VFIQFNRES+  L  LP KH D G+G ERL 
Sbjct: 189 EIHYDKVGGRDAKALVNMDDPEVIEIWNLVFIQFNRESETELNELPRKHCDCGMGLERLV 248

Query: 301 SILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFA 360
            ++Q K SNYDTD+F P F+ IQ+AT ++PY G+VG DD D VDMAYRV+ADH RTL+ A
Sbjct: 249 CVMQGKTSNYDTDLFSPYFEFIQKATNSQPYQGRVGKDDVDGVDMAYRVLADHARTLTVA 308

Query: 361 IADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQRE 420
           +ADG  P N GR YVLRRILRRAVRYG+E L A+ G F  LV++VV+ +G+ FPELK+  
Sbjct: 309 LADGGRPDNMGRGYVLRRILRRAVRYGTEKLNAKPGMFASLVDVVVESLGNAFPELKKDP 368

Query: 421 AHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKV-----LSGQDAFILWDTYGFPLDL 475
             I++II  EEA F KTL +G    ++  +   GK+     L G  A+ L+DTYGFP+DL
Sbjct: 369 EMIKDIINEEEAQFLKTLTRG----RRLLERTIGKLGDTTSLPGDIAWRLYDTYGFPVDL 424

Query: 476 TQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDD 535
           T LMAEE+GL VD+  + +A  +A+  S+      A   I +D  A + L  RGV  TDD
Sbjct: 425 TALMAEEKGLAVDMPAYESAKKDAQALSQGT-GGTAADLIGLDVHAISDLQNRGVPTTDD 483

Query: 536 SFKFIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           + K+ +         F+     + A+    EF+E V  G E G++L  +SFYAEQGGQI+
Sbjct: 484 APKYKYQATENGKYSFEPATGKVIALRRNKEFVEEVSSGQECGVLLDRTSFYAEQGGQIY 543

Query: 587 DEGFI---EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAP 643
           D GF+         F VRNVQ+  G+V+HIG +    G    G+ V   +D +RR  +  
Sbjct: 544 DTGFLVKENDPDVEFSVRNVQVRAGYVLHIGVM---EGVLRTGDIVQLNIDEERRCSVMK 600

Query: 644 NHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKA 703
           NHT THMLNF LRE+L +  DQ+GS+V P++LRFDFS    +    ++++E IVN+  + 
Sbjct: 601 NHTGTHMLNFGLREILKE-ADQRGSLVAPDRLRFDFSAKGAMKVSEVKQVEEIVNKMAEK 659

Query: 704 ELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAEL 763
             +V+    +LA AK I GLRAVF EVYPDPVRVV+IG  V  L+ DP      + S E 
Sbjct: 660 NGEVYDMNVSLAVAKAIQGLRAVFDEVYPDPVRVVSIGVDVNQLVEDPMGPGASTTSVEF 719

Query: 764 CGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAF-------EAACSLEKEVD 816
           CGGTHL          ++SEE IAKGIRRI A+T   A KA        ++   L+K+VD
Sbjct: 720 CGGTHLKRAGHIGKMVIVSEEAIAKGIRRIIALTGTEAVKAQHKVDLLEKSLLQLQKDVD 779

Query: 817 DASK-------------------IEGSLLE-------KNQVRKAQKKVAEENLQKAVKVA 850
           +  K                   +  SL+        +++V+K ++K+ E +  +   V 
Sbjct: 780 EGLKSKSVSEKELTRQIVSFDDEVSQSLISYWKKDELRSKVKKLKQKMDELDKNRKAAVM 839

Query: 851 TETAEAA-----ASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKA 905
           TE  E A     AS  + F +   +   +A A+  A+ +          +F T + +   
Sbjct: 840 TEVVEEAKKMIEASPNQKFVVHEFKADANAKALDAAMKQYKALSPETAALFFTVDQSAGK 899

Query: 906 VVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAE 965
           +VC     KS  +  L  + W+   +  +KG+ G GK   A   GT+   +  AMD+A +
Sbjct: 900 IVCMSCTPKSSIAAGLTANGWINEIVPLIKGK-GGGKEASAQATGTNTGALKEAMDIATK 958

Query: 966 FAAMKL 971
           FA +KL
Sbjct: 959 FAGLKL 964


>gi|449674132|ref|XP_002160302.2| PREDICTED: alanine--tRNA ligase, cytoplasmic-like [Hydra
           magnipapillata]
          Length = 997

 Score =  843 bits (2179), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 450/965 (46%), Positives = 613/965 (63%), Gaps = 63/965 (6%)

Query: 60  ATKVRDTFFKFFEDK-NHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSK 118
           A +VR  F  FF  K +H+   SS  +P  DPTLLFANAGMNQ+K +FLGTADPN+  +K
Sbjct: 44  AKQVRQDFIDFFVKKYDHIFVPSSSTIPHEDPTLLFANAGMNQFKSLFLGTADPNSDFAK 103

Query: 119 LTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKV 178
           L R  N+QKCIRAGGKHNDLDDVGKD YHHTFFEM+GNWSFGD+FK E I W+WELLT V
Sbjct: 104 LKRVVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMMGNWSFGDFFKKEIIAWSWELLTDV 163

Query: 179 YRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCG 237
           + L  +R Y TYFGG +  G+  D EA+  WL+  LP + VLPFG K+NFWEMG+TGPCG
Sbjct: 164 WGLEKERFYVTYFGGAD--GVPADEEAKQFWLELGLPPNHVLPFGMKENFWEMGETGPCG 221

Query: 238 PCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFE 297
           PCSE+HYDR G RDA++LVN D P  +E+WN+VFIQFNRE DG L PLP +HVDTGLG E
Sbjct: 222 PCSELHYDRIGGRDASNLVNMDVPDVLEVWNLVFIQFNREVDGQLVPLPNQHVDTGLGLE 281

Query: 298 RLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTL 357
           R+ S+LQNKMSNYDTDVF P FDAI QATG +PY G VG DD D VDMAYRV+ADHIRTL
Sbjct: 282 RIISVLQNKMSNYDTDVFTPYFDAIHQATGIKPYLGLVGPDDKDGVDMAYRVIADHIRTL 341

Query: 358 SFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELK 417
           + A++DG  P N GR YVLRRILRRAVR+ +E L  + G F  LV++V   +G V+P + 
Sbjct: 342 TVALSDGGRPDNVGRGYVLRRILRRAVRFATEKLNCKPGVFASLVDVVCTSLGSVYPNIL 401

Query: 418 QREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQ 477
           +    I++II  EE+ F KTL +G   F + A      +++G  A+ L+DTYGFP DLT 
Sbjct: 402 KDPQTIKDIINEEESQFLKTLARGRRLFNRTADKTTDGIIAGDLAWRLYDTYGFPSDLTI 461

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSF 537
           LMAEER L VD+ G+     +A+E +R A+  +      +D  A   L  +G + TD+S 
Sbjct: 462 LMAEERNLKVDMVGYEVLKAKAQEMAR-ARGSEVEDIYSLDVHAIDELKTKGFVQTDESP 520

Query: 538 KFIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDE 588
           K+ +         FQ  ++++ A+    +F++ V  G + G++L  +SFYAEQGGQ+FD 
Sbjct: 521 KYNYEKDEHGNYVFQPTEAIVTALRVNKQFVDEVTNG-KCGVLLDRTSFYAEQGGQLFDT 579

Query: 589 GFIE-GLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTC 647
           G+I  G    F V +VQI+GG+V+H+G+L    G   VG++V C +D  RR+ +  NHT 
Sbjct: 580 GYINLGEEVEFAVNDVQIHGGYVLHVGNL---VGTLKVGDKVTCSIDESRRRSLMNNHTA 636

Query: 648 THMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDV 707
           TH+LNFALR+VL D  DQ+GS+V P+KLRFDF+    +  E ++  E I  E IK +  V
Sbjct: 637 THLLNFALRKVLVDDADQRGSLVAPDKLRFDFTAKGALSSEQVKMTEDITREIIKQDQKV 696

Query: 708 FSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGT 767
           F+  ++LA AK I GLRA+F EVYPDPVRV++IG  ++DL+ DP+       S E CGGT
Sbjct: 697 FASASSLAVAKNIQGLRAIFDEVYPDPVRVISIGYDLKDLINDPQ--AGYKTSVEFCGGT 754

Query: 768 HLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDAS-------- 819
           HL +T +   FA++SEE I+KGIRRI ++T   A KA + A  L   +++ S        
Sbjct: 755 HLKSTGDVVEFAIVSEEAISKGIRRIVSLTGSDALKAHKRANQLASTLNEFSEYVEVQKN 814

Query: 820 ------------------KIEGSLLE---KNQVRKAQKKVAE-----ENLQKAV---KVA 850
                             +I  SL+    K+++R+  K + +     E ++KA    +V 
Sbjct: 815 NNTLNMRQLSQQIAKITEEISESLIPAWCKHELREKLKSIKKHLDDTERMEKASRQNRVI 874

Query: 851 TETAEAAASN-GKPFCISRVEVGLDAAAVREAVLKVIE--QKGMPVMVFSTDETTNKAVV 907
            + +E A  +  +PF + R+E G +A A+ +A LK ++     +  M+FS D  TN  + 
Sbjct: 875 EKASEIATLHLNEPFIVQRMEDGCNAKAL-DAALKSVKAVAPNLSAMLFSVDTETNTVIC 933

Query: 908 CAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFA 967
              VP+    +  L+ +EW+      + G+ G      A G G    ++  A+++A  FA
Sbjct: 934 LCQVPQNVVDNTSLKANEWVKEVSTVIGGKGGGKPIS-AQGSGDKMQEIDKAVEVAKSFA 992

Query: 968 AMKLR 972
           ++KL+
Sbjct: 993 SLKLQ 997


>gi|158298580|ref|XP_318757.4| AGAP009701-PA [Anopheles gambiae str. PEST]
 gi|157013952|gb|EAA14564.4| AGAP009701-PA [Anopheles gambiae str. PEST]
          Length = 946

 Score =  843 bits (2178), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 450/952 (47%), Positives = 601/952 (63%), Gaps = 53/952 (5%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A+++R  F  FF++K H+   SS V+P++DPTLLFANAGMNQ+KPIFLGT DPN+ ++K 
Sbjct: 7   ASQIRSIFLDFFKEKEHLYVHSSSVIPLDDPTLLFANAGMNQFKPIFLGTVDPNSDMAKW 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFGDYFK E   WAWELLT+  
Sbjct: 67  VRTANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKEICTWAWELLTERL 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
           +LP +RLY TYFGG  ++GL PD E R+IWLK  +    +LP   KDNFWEMG+TGPCGP
Sbjct: 127 KLPKERLYVTYFGGHPESGLEPDLECREIWLKLGVKEEHILPGSMKDNFWEMGETGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSE+H+DR G R    LVN DDP  +EIWN+VFIQ+NRE D SLK LP KH+D G+GFER
Sbjct: 187 CSELHFDRIGGRSVPELVNMDDPDVLEIWNLVFIQYNREQDSSLKLLPKKHIDCGMGFER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S++Q+K SNYDTDVFMP+FDAIQ+ TGA  Y G+VGADD+D VDMAYRV+ADH RT++
Sbjct: 247 LVSVIQDKRSNYDTDVFMPLFDAIQKGTGAAAYQGRVGADDSDGVDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY +E L A+ GFF  LV+ VV+++G+ FPE+++
Sbjct: 307 IALADGGFPDNTGRGYVLRRILRRAVRYATEKLNAKPGFFATLVDTVVQLLGETFPEVRK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKA-AQDVQGKVLSGQDAFILWDTYGFPLDLTQ 477
              HI+ +I  EE  F KTL +G     +  A+    KV+ G  A+ L+DTYGFP+DLT 
Sbjct: 367 DPQHIKNVINEEEQQFLKTLTRGRNLLNRTIAKLGNSKVIPGDVAWRLYDTYGFPIDLTL 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSF 537
           LMAEE+ + +D+EG+  A  E+   S+  + K     I +D    + L +R V ATDDSF
Sbjct: 427 LMAEEKQMTIDMEGYEKAKHESYIISQ-GKEKSKTATIDLDVHGISELQERKVPATDDSF 485

Query: 538 KFIW------------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
           K+ +            F+     I A+   + F+E V  G E G++L  ++FYAE GGQI
Sbjct: 486 KYRYKAESIDPLAQYVFEPCTGKIVALRFNNAFVEEVQAGQECGVILDRTNFYAESGGQI 545

Query: 586 FDEGFIEGL---FGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIA 642
           +D+GF+  +      F V  V   GG+V+HIG +    G   VG+EV C +D  RR+L  
Sbjct: 546 YDQGFLVKVNDESSEFNVSLVYNRGGYVLHIGVV---EGTLRVGDEVHCHMDVVRRQLTM 602

Query: 643 PNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIK 702
            NH+ TH LN +L +VLG   DQ+GS+V+PEKLRFDF++   +  E +   E +  E +K
Sbjct: 603 KNHSATHALNHSLLKVLGQDTDQRGSLVVPEKLRFDFTNKSAMTIEQVAEAERLTREVVK 662

Query: 703 AELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAE 762
             + V++KEA LA AK I GLR+VF EVYPDPVRV++ G  VE L ADP  +  +  S E
Sbjct: 663 RNVQVYAKEANLAVAKTIRGLRSVFDEVYPDPVRVISFGVPVEQLEADPTGEAGVINSVE 722

Query: 763 LCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIE 822
            CGGTHL  +     F + +EE IAKGIRRI A+T   A KA +    LE+E+   SK+ 
Sbjct: 723 FCGGTHLHQSGHMVDFVITTEEAIAKGIRRIVALTGPEALKALKKTELLEQEL---SKLR 779

Query: 823 GSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA------ 876
            ++    + R+A+     E+++K +++  + ++A     K   +  V  GL  A      
Sbjct: 780 ATIDGDKEGREAK-----EHVKKIIELTDDVSQATIPYVKKDELRTVLKGLKKALDDKER 834

Query: 877 AVREAVLK-VIEQ--------KGMPVMVFSTDETTNKAVVCAGVPE----KSDQS----K 919
             R AV   V+E+        K  P +V   +   N   + + + E      +QS     
Sbjct: 835 VARAAVASGVVEKAKELSQAHKDAPFLVQRLEALNNTKALDSALKEVRKVNPEQSALFLS 894

Query: 920 QLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
            L+ +EW++  + P+ G  G GK   A   G +  +    ++LA  FAA KL
Sbjct: 895 GLKANEWIS-HIAPVMGGKGGGKPESAQASGGNFDKADEILELARLFAASKL 945


>gi|328772364|gb|EGF82402.1| hypothetical protein BATDEDRAFT_32863 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 965

 Score =  843 bits (2177), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 454/964 (47%), Positives = 591/964 (61%), Gaps = 58/964 (6%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           +WP +KVR TF  +FE   H +  SS  +P  DPTL+FAN+GMNQ+KPIFLGT DPN+ L
Sbjct: 4   KWPLSKVRKTFIDYFEQHGHTHVVSSSTIPHGDPTLMFANSGMNQFKPIFLGTVDPNSDL 63

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
           ++L+RA N+QKCIRAGGKHNDL+DVG+DTYHHTFFEMLGNWSFG+YFK EAIE AWE+LT
Sbjct: 64  ARLSRAANSQKCIRAGGKHNDLEDVGRDTYHHTFFEMLGNWSFGNYFKTEAIEMAWEILT 123

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
           KVY LP DRLY TYFGGD+  GL  D EA+ +W    +    ++P   KDNFWEMGD GP
Sbjct: 124 KVYGLPKDRLYITYFGGDKSLGLESDIEAKHLWRNIGVEEDHIIPGSVKDNFWEMGDQGP 183

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPCSEIH+DR G R+AA LVN DDP  +EIWN+VF+Q+NRE D SLK LP KH+DTG+G
Sbjct: 184 CGPCSEIHFDRIGGRNAADLVNMDDPDVLEIWNLVFMQYNREVDRSLKLLPNKHIDTGMG 243

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
            ERL SILQ+K SNYDTDVF  IF AIQ+ TG R Y G++G  D D +D AYRV+ADH+R
Sbjct: 244 LERLVSILQDKRSNYDTDVFTGIFSAIQKLTGVREYQGRLGEADQDGIDTAYRVIADHVR 303

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFP 414
           TL+FAI+DG  P NEGR YVLRRILRR  RY  +      G FF+ LV+ VV  MGD FP
Sbjct: 304 TLTFAISDGGVPSNEGRGYVLRRILRRGARYARKKFNVPIGCFFSSLVDTVVTEMGDAFP 363

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ---GKVLSGQDAFILWDTYGF 471
           E+ +R   ++EI+  EE SF KTL +G   F +     +   GKV+SG DA+ L+DTYGF
Sbjct: 364 EITERVDDLKEILDEEERSFSKTLDRGERLFGEYLAKTKASGGKVISGADAWRLYDTYGF 423

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR-GV 530
           P+DLT+LMAEE GL VD   F      A+ERSR    K+ G  + +D  A   L     V
Sbjct: 424 PVDLTRLMAEENGLTVDEVEFEQEQKIAKERSRGRNEKETGIVVSLDIHAIGELEANPNV 483

Query: 531 LATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNE---VGIVLASSSFYAEQGGQIFD 587
             TDD +K+  F D  S +KA++   +F+ESV   N     G++L  ++FYAEQGGQ FD
Sbjct: 484 QPTDDQYKY-GFDDISSKVKALFVNGKFVESVSSTNHQGRFGVILDKTNFYAEQGGQQFD 542

Query: 588 EG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            G   ++G    F + +VQ++GG+V+HIG L  G+   S+ + ++C  D  RR  +  NH
Sbjct: 543 TGSLTVDGSL-EFAIEDVQVFGGYVLHIGYLKYGS--LSLDDSIMCTYDELRRWPLRNNH 599

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFD-------------FSHGKPVDPEHLRR 692
           T TH+LN+ LR V+G  VDQKGS+V PEKLRFD             +S  K      L +
Sbjct: 600 TATHVLNYGLRSVIGTIVDQKGSLVSPEKLRFDYSCKVNKCFEYNIYSRRKIGLTAELAK 659

Query: 693 IESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPE 752
           +E I N  I     +++ E +LA AK INGLRAVFGEVYPDPVRVV+IG  ++++L DP 
Sbjct: 660 VEKITNSFIAKNDIIYTSEVSLALAKSINGLRAVFGEVYPDPVRVVSIGFPIDEMLKDPS 719

Query: 753 NKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLE 812
           N +W   S E CGGTH+  T + + F ++ +  +AKGIRRI  VT   A K  + A   E
Sbjct: 720 NAKWAETSIEFCGGTHVQRTGDIKRFVIIEDSALAKGIRRIVGVTGDEALKYQKLADEFE 779

Query: 813 KEVDDASKIEGSLLEKNQ--------------VRKAQKK--------------VAEENLQ 844
            +++   +I+G+L E                 +RK   K               A + L+
Sbjct: 780 IKLEQLRRIKGALFETTLKEIGKTLDSSVLPVLRKHSLKETFSAIKKDFDDKDKARKALE 839

Query: 845 KAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNK 904
               V T  +   A+  K   +S +    +  A+ +A+  V   K    M+ + D  T+K
Sbjct: 840 SKEAVDTVKSFFEANPEKTVFVSVINQSGNTKALAQAIAHVRTLKDKAAMLIAVDPETSK 899

Query: 905 AVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAA 964
                 VP+     + L+ +EW  A    + G+ G G    A G G  AA V  A+D A 
Sbjct: 900 VAHQCIVPQIL-IDRGLKATEWADAVASKVGGKKG-GSESAAQGAGDRAASVQEAVDAAT 957

Query: 965 EFAA 968
            F A
Sbjct: 958 AFIA 961


>gi|350584879|ref|XP_003126924.3| PREDICTED: alanyl-tRNA synthetase, cytoplasmic [Sus scrofa]
          Length = 956

 Score =  843 bits (2177), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 456/957 (47%), Positives = 598/957 (62%), Gaps = 57/957 (5%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A+++R  F  FF+   H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  ++KL
Sbjct: 7   ASEIRQRFIDFFKRNEHTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A + A ELLT+ +
Sbjct: 67  SRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +P +RLY TYFGGDE AGL PD E + IW    L  S++LP   KDNFWEMGDTGPCGP
Sbjct: 127 GIPVERLYVTYFGGDEAAGLEPDLECKQIWQNLGLDDSKILPGNMKDNFWEMGDTGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G RDAA LVN DDP  +EIWN+VFIQ+NRE+DG LKPLP K +DTG+G ER
Sbjct: 187 CSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNRETDGVLKPLPKKSIDTGMGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+F+P F+AIQ+ TGARPY+GKVGADDAD +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGADDADGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY  E L A  GFF  LV++VV+ +GD FPELK+
Sbjct: 307 VALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRGFFATLVDVVVQSLGDAFPELKK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
               +++II  EE  F KTL +G     +  Q +   K + G  A++L+DTYGFP+DLT 
Sbjct: 367 DPDMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTG 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
           L+AEE+GL+VD++GF      A+ +S   Q K AGG   I++D  A   L +RG+ ATDD
Sbjct: 427 LIAEEKGLVVDMDGFEEERKLAQLKS---QGKGAGGEDLIMLDIYAIEELRERGLEATDD 483

Query: 536 SFKFIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           S K+ +         F+   + + A+     F+E V  G E G+VL  + FYAEQGGQI+
Sbjct: 484 SPKYNYHSDSSGSYVFESAVATVMALRRDRMFVEEVCTGQECGVVLDKTCFYAEQGGQIY 543

Query: 587 DEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           DEG++  +  S      F V+N Q+ GG+V+HIG++    G   VG++V   +D  RR+ 
Sbjct: 544 DEGYLVKVDDSSEDKTEFTVKNAQVRGGYVLHIGTIY---GSLKVGDQVRLFIDEPRRRP 600

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           +  NHT TH+LNFALR VLG+  DQ+GS+V P++LRFDF+    +  + +++ E + NE 
Sbjct: 601 VMSNHTATHILNFALRSVLGE-ADQRGSLVAPDRLRFDFTAKGAMSTQQIKKAEELANEM 659

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I+A   V+++   LA AK I GLRAVF E YPDPVRVV+IG  V +LL DP        S
Sbjct: 660 IEAAKPVYAQNCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTS 719

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKA--FEA-----ACSLEK 813
            E CGGTHL N+  A AF +  EE +        +  +G  + A  F+A     A  L  
Sbjct: 720 VEFCGGTHLQNSSHAGAFVM--EESLXXXXXXYVSSLSGRGWAALVFKAGGVGWAHVLGV 777

Query: 814 EVDDASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASN------------- 860
            V          L    + + QK    ENL+   KV  +   A+ ++             
Sbjct: 778 RVPVVFLFWFQALATAVIPQWQKDEFRENLRSLKKVMDDLDRASKADVQKRVLERTKQLI 837

Query: 861 ----GKPFCISRVEVGLDAAAVREAVLKVIEQKG--MPVMVFSTDETTNKAVVCAGVPEK 914
                +P  I  +E G  A A+ EA LK+ +        M+F+ D    K +    VP+ 
Sbjct: 838 DSNPNQPLVILEMESGASAKALNEA-LKLFKTHSPQTSAMLFTVDNEAGKIICLCQVPQN 896

Query: 915 SDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
              ++ L+ SEW+      + G+ G GK   A   G +   +  A+ LA  FA ++L
Sbjct: 897 I-ANRGLKASEWVQQVSGLMDGK-GGGKDVSAQATGKNVGCLQEALQLATSFAQLRL 951


>gi|295672445|ref|XP_002796769.1| alanyl-tRNA synthetase [Paracoccidioides sp. 'lutzii' Pb01]
 gi|226283749|gb|EEH39315.1| alanyl-tRNA synthetase [Paracoccidioides sp. 'lutzii' Pb01]
          Length = 962

 Score =  842 bits (2175), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 461/959 (48%), Positives = 606/959 (63%), Gaps = 62/959 (6%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           EWPA +VR+ F  FF+D  H    SS VVP++DPTLLFANAGMNQYK IFLGT +PN+  
Sbjct: 11  EWPALRVRNAFLDFFKDNGHTFVPSSSVVPLSDPTLLFANAGMNQYKAIFLGTVEPNSDF 70

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
           ++L RA NTQKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK EAI ++W+LLT
Sbjct: 71  AQLKRAHNTQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIRYSWDLLT 130

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
           KVY L  DRLY TYF G+  AG+ PD EARD+WL   +    +L    KDNFWEMG+ GP
Sbjct: 131 KVYGLDPDRLYVTYFEGNPDAGIEPDLEARDLWLSVGVAEDHLLSGNMKDNFWEMGEQGP 190

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPCSEIHYDR G R+A+ LVN DDP  +EIWN VFIQ+NRE D SL+ LP KH+DTG+G
Sbjct: 191 CGPCSEIHYDRIGGRNASHLVNQDDPNVLEIWNNVFIQYNREQDKSLRSLPNKHIDTGMG 250

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
           +ERL SILQNK SNYDTDVF P+F+ I++ TG+RPY+GK   +D D VD AYRVVADHIR
Sbjct: 251 YERLVSILQNKSSNYDTDVFTPLFEKIREITGSRPYTGKFHEEDVDGVDTAYRVVADHIR 310

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQ-DGFFNGLVNIVVKVMGDVFP 414
           TL+FAI+DG+ P NEGR YV+RR+LRR  RY  + L  +  GFF+ +V  +V+ MGD+FP
Sbjct: 311 TLTFAISDGAVPNNEGRGYVVRRVLRRGARYARKYLNVEIGGFFSQIVPTLVEQMGDMFP 370

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK---VLSGQDAFILWDTYGF 471
           E+K++   + EI+  EE SF KTL +G   F++ A   + K    L G D + L+DT+GF
Sbjct: 371 EIKRKATDVMEILDEEEISFAKTLDRGERLFEEYALQAKQKGLDRLHGADVWRLYDTFGF 430

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           P+DLTQLMAEERGL +D    N   +EAR R++ A   Q  G +  D      +H  G+L
Sbjct: 431 PVDLTQLMAEERGLKID----NGEFEEARLRAKEASKGQ--GKLTKDV-VKLTVHDLGLL 483

Query: 532 -------ATDDSFKFIWFQDHKSVIKAIYTGSEFIES---VVPGNEVGIVLASSSFYAEQ 581
                   TDDS KF    +  S IKAIY   +F+ S   +  G + GI+L  ++FYAEQ
Sbjct: 484 ETMDDVPKTDDSAKF-GRGNITSQIKAIYHNKKFVNSSKDIPEGEQFGIILDRTNFYAEQ 542

Query: 582 GGQIFDEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRK 639
           GGQ +D G   I+G      V +VQ+YGG+V+H G +  G+  F+V + VI + D  RR 
Sbjct: 543 GGQEYDTGKIIIDGK-AELTVEDVQVYGGYVLHTGFMKYGS--FNVNDSVIAEYDELRRW 599

Query: 640 LIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNE 699
            I  NHT TH+LNFALR+VLGD V+QKGS+V  EKLRFDFSH   V    L  IE I  +
Sbjct: 600 PIRNNHTGTHILNFALRKVLGDGVEQKGSLVAAEKLRFDFSHKSAVSDSDLEEIERISTD 659

Query: 700 QIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSI 759
            I+    V+ K+  L+ A+ I G+RAVFGE YPDPVRVV++G ++E++L D  +  W  I
Sbjct: 660 YIRQNCAVYGKDVPLSIAREITGVRAVFGETYPDPVRVVSVGVELEEILKDVHDPRWKEI 719

Query: 760 SAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAY-------------KAFE 806
           S E CGGTH+  T + +   +L E GIAKGIRRI AVT   A+             K FE
Sbjct: 720 SIEFCGGTHVQKTGDIKDLVILEESGIAKGIRRIIAVTGEEAHEVQRIAKEFGERLKRFE 779

Query: 807 AA-CSLEKEVD------DASKIEGSLLEKNQVR-----------KAQKKVAEENLQKAVK 848
                 +KE++      D +++  S +EK Q R           + QK   +   +KA+ 
Sbjct: 780 KMELGPKKEMEAKLLQVDLNQLTISAVEKAQFREQFTQIHKKVLEGQKAAQKLESKKALD 839

Query: 849 VATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKV-IEQKGMPVMVFSTDETTNKAVV 907
                 +A  +   P  + ++ +  +A AV +++  V  + +   + VF+ D+   K V 
Sbjct: 840 AIMGYFQAPENKDAPHLVLQLPISANAKAVSDSLNFVKTKMQDKSLYVFAADKEAGKIVH 899

Query: 908 CAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEF 966
              V E   Q +    ++W  +    + GR G GK  ++ G GTDA ++  A+  A E+
Sbjct: 900 GCHVAENLSQ-QGASPNDWANSVANVVGGRAG-GKAPISIGNGTDADKLDEAIKAATEY 956


>gi|308485186|ref|XP_003104792.1| CRE-AARS-2 protein [Caenorhabditis remanei]
 gi|308257490|gb|EFP01443.1| CRE-AARS-2 protein [Caenorhabditis remanei]
          Length = 966

 Score =  841 bits (2172), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 463/965 (47%), Positives = 607/965 (62%), Gaps = 66/965 (6%)

Query: 60  ATKVRDTFFKFF-EDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSK 118
           A++VR TF  FF E K H    SS V+P +DPTLLFANAGMNQ+KP+FLG ADPN+ L+K
Sbjct: 6   ASEVRSTFINFFKEKKEHTYVHSSSVIPHDDPTLLFANAGMNQFKPLFLGIADPNSDLAK 65

Query: 119 LTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKV 178
           L RA NTQKCIRAGGKHNDLDDVGKD YHHT+FEMLGNWSFGDYFK E I WAWELLT V
Sbjct: 66  LKRAVNTQKCIRAGGKHNDLDDVGKDVYHHTYFEMLGNWSFGDYFKKEIITWAWELLTTV 125

Query: 179 YRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCG 237
           Y +P++RLY + FGGDE  G+  D+EAR+IW    +P  R+L FG KDNFWEMGD GPCG
Sbjct: 126 YGIPSERLYVSVFGGDEATGVPADSEAREIWRSVGVPDERILNFGMKDNFWEMGDVGPCG 185

Query: 238 PCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFE 297
           PCSEIHYDR GNRDA+ LVN DDP  +EIWN+VFIQFNRE  GSLK LPAKH+D GLG E
Sbjct: 186 PCSEIHYDRIGNRDASHLVNADDPMVVEIWNLVFIQFNREEGGSLKTLPAKHIDCGLGLE 245

Query: 298 RLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTL 357
           RL +++Q+K SNYDTD+F PIF AI + +G R Y+G +G DD D +DMAYRVVADHIRTL
Sbjct: 246 RLIAVMQDKTSNYDTDIFQPIFQAINKGSGVRAYTGHIGDDDKDGIDMAYRVVADHIRTL 305

Query: 358 SFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELK 417
           + A++DG  P N GR YVLRRILRR VRY +E L AQ GFF  LV +V+ ++G+ FPEL 
Sbjct: 306 TIALSDGGRPDNSGRGYVLRRILRRGVRYATEKLNAQPGFFASLVPVVISILGETFPELS 365

Query: 418 QREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG--KVLSGQDAFILWDTYGFPLDL 475
           +    + +II  EE  F KTL +G   F++A   +    K   G  A+ L+DTYGFP DL
Sbjct: 366 RDPETVMDIINDEEKQFLKTLSRGRVLFQRAVDSLPAGTKTFPGDVAWRLYDTYGFPADL 425

Query: 476 TQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDD 535
           TQLMAEE+GL VD+  F  A  +A E S SA   +    + +D  A A L ++GV  TDD
Sbjct: 426 TQLMAEEKGLSVDLTAFEEARKKAIETS-SAGTGKFRDTLDLDVHALADLQQKGVPTTDD 484

Query: 536 SFKFIW------------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGG 583
           + K+ +            F+     I AI    +F++ +V G E  I+L  ++FYAEQGG
Sbjct: 485 TPKYAYSFTGEGADAVYKFEPCVGKILAIRRDGKFVDELVAGEEGAILLDRTNFYAEQGG 544

Query: 584 QIFDEGFIEGL---FGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           QI+D G +  +      F V N Q+ GG+++ +GS     G F +G++V  + D DR++L
Sbjct: 545 QIYDVGVLTKVNDESNEFNVSNCQVRGGYIVLVGS---SEGNFKIGDDVNQRFDEDRKQL 601

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           I  NHT TH+LN+ALR+VL D  DQKGS+V P+++RFDF++   +  E +++ E    + 
Sbjct: 602 IMKNHTGTHVLNYALRKVLADS-DQKGSLVAPDRMRFDFTNKAAMTSEQVKQAEEYAQQL 660

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I  +  V++K + LA+AK INGLRA+F E YPDPVRVVA+G  VE LL +P+  E  + +
Sbjct: 661 INTKGQVYAKNSPLADAKKINGLRAMFDETYPDPVRVVAVGTSVEQLLQNPDAPEGQNTT 720

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK 820
            E CGGTHL N        + SEE IAKGIRRI A+T   A +A   A  LE  + + SK
Sbjct: 721 VEFCGGTHLQNVSHIGRIVISSEEAIAKGIRRIVALTGPEADRAIARADRLEARLVEESK 780

Query: 821 IEGS---LLEKNQVRKAQKKVAE----------------------ENLQK---------- 845
              +   L  K++ ++ QKK+ E                      +++QK          
Sbjct: 781 HAKNQELLANKDKFKELQKKIQEIVDEANGALLPSWRKDSLRKKAKDVQKDMDGYSKAQQ 840

Query: 846 ---AVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETT 902
              A KV  E  E AA++ +P  +  V      +   +  LK+++     VM FS +E T
Sbjct: 841 AAVAEKVLGEAKELAAASEQPAVLVHVFTSNANSKAIDNALKLLKDT-KAVMAFSVNEDT 899

Query: 903 NKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDL 962
            K V+C    +KS  S  L+ +EW+      L G+ G GK   A   G +  ++  A++L
Sbjct: 900 GK-VLCLAKVDKSLVS-SLKANEWVNEVCTVLGGKGG-GKDANAQLTGENVDKLDAAVEL 956

Query: 963 AAEFA 967
           A +FA
Sbjct: 957 AQKFA 961


>gi|388856737|emb|CCF49697.1| probable ALA1-alanyl-tRNA synthetase, cytosolic [Ustilago hordei]
          Length = 985

 Score =  841 bits (2172), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 468/967 (48%), Positives = 599/967 (61%), Gaps = 59/967 (6%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           +WPATKVRDTF  +F+ + H    SS  +P +DP+LLFANAGMNQYKPIFL  ADPN+  
Sbjct: 16  DWPATKVRDTFTGYFQKRAHTFVPSSSTIPYDDPSLLFANAGMNQYKPIFLSIADPNSSF 75

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
             + RA N+QKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK EAIE AWELLT
Sbjct: 76  GSMKRAVNSQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAIEMAWELLT 135

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
            VYRLP DRLY TYF GD K GL PD EARD+WLK  +    +L    KDNFWEMG TGP
Sbjct: 136 VVYRLPKDRLYVTYFEGDAKQGLEPDLEARDLWLKVGVAEDHILTGDAKDNFWEMGATGP 195

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPCSEIHYDR G R+A+ LVN DDP  IEIWN VF+QFNRE DGSL+PLPAKH+DTG+G
Sbjct: 196 CGPCSEIHYDRIGGRNASDLVNKDDPNVIEIWNNVFMQFNREDDGSLRPLPAKHIDTGMG 255

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
           FERL SILQ+K SNYDTDVF PIF+ IQQ T AR Y+GK+GA+D D +D AYRVVADH+R
Sbjct: 256 FERLVSILQDKPSNYDTDVFTPIFNKIQQLTSARAYTGKLGAEDKDGIDTAYRVVADHVR 315

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFP 414
           TL+FAI+DG  P  +GR YVLRRILRR  RY  +  +   G FF+ LV  +V  MG  FP
Sbjct: 316 TLTFAISDGGVPDRDGRGYVLRRILRRGTRYVRKYFQVPIGSFFSQLVPTLVDQMGHFFP 375

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTYGF 471
           E+ ++   ++ I+  EEASF +TL +G    E++   A+    K LSG D + L+DT+GF
Sbjct: 376 EITKKVDDVKAILDEEEASFARTLDRGEKLFEEYAAKAKADGKKQLSGSDVWKLYDTFGF 435

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK-RGV 530
           P+DLT +MAEE+GL V+ + F  A  E++E S++   K    A+  D      L K   V
Sbjct: 436 PVDLTLIMAEEQGLGVNEKEFEAAQAESKEISKAGGKKGETEAVKFDVHDLGHLEKDSSV 495

Query: 531 LATDDSFKFIWFQDHKSVIKAIYTGSEFI-ESVVPGNEV---GIVLASSSFYAEQGGQIF 586
             T D FK+      K+ +KAIY    F  E+   G+     GI+L  +  YAE GGQ  
Sbjct: 496 PKTQDDFKY-GVNSVKASVKAIYQDHAFFPETTKIGDRAKNFGILLDRTCLYAESGGQQA 554

Query: 587 DEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           D G   I+G    F V + Q++ G+V+HIG L    G  S+ +EV+   D  RR  +  N
Sbjct: 555 DTGSIVIDGK-TEFVVEDAQVFSGYVLHIGHLKR--GELSLNDEVVVSYDQSRRGPLQSN 611

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           HT TH+LNF LREVLGDH+DQKGS+V P KLRFDFSH + V+ + L++IE I  E IK +
Sbjct: 612 HTATHILNFGLREVLGDHIDQKGSLVAPTKLRFDFSHKQGVNVQELKKIEDISIEWIKRD 671

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
           + V+SKE  L  A+ I GLRAVFGE YP+PVRVV +   ++ + +D EN +W   S E C
Sbjct: 672 VGVYSKEMPLDTAQQIPGLRAVFGEAYPNPVRVVTLAYDLDTIASDIENPKWRGTSVEFC 731

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVT----TGLAYKAFEAACSL-------EK 813
           GGTH++ T E   F +  E GIAKGIRRI AVT     G+   A +A   L       E+
Sbjct: 732 GGTHVAKTGEIREFVITEESGIAKGIRRIIAVTGDEAAGVTKVANDAEARLVEIDAIEEQ 791

Query: 814 EVDDA---------SKIEGSLLEK---NQVRKAQKKVAEENLQKAVKVATETA-----EA 856
              DA         ++++ S++ K   N+   A +K  +  L+   K  T+       E 
Sbjct: 792 AAKDAALKAFGTRLAQLDISVVRKATLNEKFSAIRKKLDAGLKAKDKADTKAVVDAVEEH 851

Query: 857 AASNGKPFC-ISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAG----- 910
             +N    C I + +VG +  A++ A +  +++      +FS +   N   V  G     
Sbjct: 852 FKTNRNASCFIHKFDVGSNMKALQSA-MNTVKKMDKTAYLFSQELDINGTKVADGNALKA 910

Query: 911 ------VPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQ-VTPAMDLA 963
                    K DQ+K L   EW+  + Q + G+ G GK   A G G    Q +  A++ A
Sbjct: 911 KVVHVAYVSKHDQTKGLNAKEWIETSSQHVGGKGG-GKQDSAQGVGEMGGQALDDAVEAA 969

Query: 964 AEFAAMK 970
             F  +K
Sbjct: 970 RRFYTLK 976


>gi|328858383|gb|EGG07496.1| hypothetical protein MELLADRAFT_48072 [Melampsora larici-populina
           98AG31]
          Length = 966

 Score =  840 bits (2171), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 454/897 (50%), Positives = 583/897 (64%), Gaps = 52/897 (5%)

Query: 54  QVVEWPATKVRDTFFKFFEDK-NHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADP 112
           Q  +WPA KVR TF  +F++K  H    SS V P++DPTLLF NAGMNQYK IFLGT DP
Sbjct: 12  QFGDWPAKKVRKTFINYFQEKYQHQFVPSSSVCPLDDPTLLFTNAGMNQYKSIFLGTIDP 71

Query: 113 NTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAW 172
           +  LSK+ RA N+QKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK + ++ AW
Sbjct: 72  SNPLSKIKRAVNSQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKEDGLKMAW 131

Query: 173 ELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMG 231
           ELLT++Y LP DRLY TYF GDEK GL PD E++ IWL+  +    +LP   KDNFWEMG
Sbjct: 132 ELLTELYGLPKDRLYVTYFEGDEKQGLEPDLESKRIWLELGVQEDHILPGNAKDNFWEMG 191

Query: 232 DTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVD 291
            TGPCGPCSEIHYDR G R+A SLVN DDP  IEIWN VFI++NRESDGSLK LP+KHVD
Sbjct: 192 ATGPCGPCSEIHYDRVGGRNAGSLVNQDDPLVIEIWNNVFIEYNRESDGSLKELPSKHVD 251

Query: 292 TGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVA 351
           TG+GFERL SILQ+K SNYDTD+F PIF+ IQQ TGARPY GK+G +D D +D AYRVVA
Sbjct: 252 TGMGFERLVSILQDKKSNYDTDIFRPIFEKIQQLTGARPYEGKLGIEDQDGIDTAYRVVA 311

Query: 352 DHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMG 410
           DHIRTL+FAI+DG  P N GR YVLRRILRR  RY  +      G FF+ L+  +++ MG
Sbjct: 312 DHIRTLTFAISDGGVPNNVGRGYVLRRILRRGARYIRKKFNVPIGTFFSKLMPTLIEQMG 371

Query: 411 DVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ---GKVLSGQDAFILWD 467
           D FPE+++R   + EI+  EE SF  TL +G + F+K    V+   GKVL G++ + L+D
Sbjct: 372 DEFPEIEKRRLEVIEILNEEEDSFSLTLDRGEKIFEKYCNRVKKNNGKVLDGKEVWKLYD 431

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
           T+GFP+DLT LMAEE G+ +D +GF  A  E++E S+  + K  G  + +D  + A L  
Sbjct: 432 TFGFPIDLTLLMAEEAGIGIDQDGFEIAQSESKELSKGGKKKIVGAGVELDVHSIAVLES 491

Query: 528 R-GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIES---VVPGNEVGIVLASSSFYAEQGG 583
              V  TDDS KF       + +KAI+   EF  S   +  G   G++L  ++FYAEQGG
Sbjct: 492 NSSVPKTDDSSKFS-LTTINATVKAIFQAGEFYSSSKELKSGEPFGVILDKTNFYAEQGG 550

Query: 584 QIFDEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYD--RRK 639
           Q  D G   IEG    F V +VQ++ G+V+HIG+L+EG     + +E + +  +D  RRK
Sbjct: 551 QENDTGTLIIEGEM-IFDVEDVQVFNGYVLHIGNLSEG----EIKKEDLVQSSFDELRRK 605

Query: 640 LIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNE 699
            I  NHT TH+LN+ALRE LGDH+DQKGS+V   K RFDFSH + V    L +IE I N+
Sbjct: 606 PIKNNHTGTHILNYALRETLGDHIDQKGSLVSSNKFRFDFSHKQQVKASELEQIEKICND 665

Query: 700 QIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENK-EWLS 758
            I     V+SKE  L+EA+ I GLRAVFGE YPDPVRVV IG +  +L AD  N+ +WL+
Sbjct: 666 WILKNHSVYSKEMKLSEAEKIPGLRAVFGERYPDPVRVVVIGPEPIELDADQLNESKWLN 725

Query: 759 ISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVD-- 816
            S E CGGTH+  T E +   L+ E GIAKGIRRI AVT   A    E A  L  ++D  
Sbjct: 726 YSVEFCGGTHVKKTNEIKELILVEESGIAKGIRRIVAVTGEEAKTVIELANELNLKLDKI 785

Query: 817 -----------------DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAAS 859
                            + + IE S++EK+++ K +  V +  L +  K+ T+  E  A+
Sbjct: 786 IELPIKEREQGLKGFSVELAGIEISVIEKSKI-KEKFGVVQRELIELGKLQTKADEKKAT 844

Query: 860 N----------GKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAV 906
                       +   I  ++VG +   +  A   +++ +G    +FS +++  K V
Sbjct: 845 QLVKDWIEVHPNERVMIDVLDVGSNTKCLMSAC-GILKNEGKAGYLFSINKSDGKIV 900


>gi|442755487|gb|JAA69903.1| Putative alanyl-trna synthetase translation [Ixodes ricinus]
          Length = 968

 Score =  840 bits (2170), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 445/968 (45%), Positives = 598/968 (61%), Gaps = 61/968 (6%)

Query: 60  ATKVRDTFFKFFEDK-NHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSK 118
           A ++R  F  FF  K +H++ +SS V+P +DPTLLF NAGMNQ+KPIFLGT DPN+   K
Sbjct: 4   AAEIRQQFIDFFAQKYDHLHVRSSSVIPHDDPTLLFTNAGMNQFKPIFLGTVDPNSDAGK 63

Query: 119 LTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKV 178
             R  +TQKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFGD+FK E   WAWELLTKV
Sbjct: 64  YKRVVDTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDFFKKEICSWAWELLTKV 123

Query: 179 YRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCG 237
           Y+L  +RLY TYFGG+E AGL PD E + IW+   +P  R+LP   KDNFWEMG+TGPCG
Sbjct: 124 YKLREERLYVTYFGGNEAAGLEPDLECKQIWMNLGVPEERILPGSMKDNFWEMGETGPCG 183

Query: 238 PCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFE 297
           PCSEIHYDR G R+A+ LVN D P  +EIWN+VFIQ+NRE+DG L+ LP +HVDTG+GFE
Sbjct: 184 PCSEIHYDRIGGRNASHLVNADVPDVLEIWNLVFIQYNRETDGKLRLLPKQHVDTGMGFE 243

Query: 298 RLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTL 357
           RL S++Q+K SNYDTDVF+PIFDAIQ+ATG RPY G+ G +D D +DMAYRV+ADH RTL
Sbjct: 244 RLVSVIQDKPSNYDTDVFVPIFDAIQKATGVRPYQGRGGKEDTDGIDMAYRVLADHSRTL 303

Query: 358 SFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELK 417
           + A++DG  P N GR YVLRRILRRAVRY +E + A  G F  LV +VV+++GDVFPELK
Sbjct: 304 TIALSDGGRPDNVGRGYVLRRILRRAVRYATEKMNAAPGTFASLVPVVVQILGDVFPELK 363

Query: 418 QREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLT 476
           +    + +II  EE  F KTL +G    +K    +   K L G  A+ L+DTYGFP+DLT
Sbjct: 364 KDTESVMDIINEEEGQFLKTLSRGRRLLEKTVNKLGDQKFLPGDVAWRLYDTYGFPIDLT 423

Query: 477 QLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDS 536
           QLM EE+GL VD+E +  A   A+  S++  +K   G + +D  A A L  + V  T+D 
Sbjct: 424 QLMVEEKGLAVDMESYEKAKAAAQLASQAGDSKVDDG-LKLDVHAIADLQSKNVPTTNDL 482

Query: 537 FKFIW------------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
            K+ +            F      +  + T  +F+ES+  G + G++L  ++FYAE GGQ
Sbjct: 483 PKYDYRATSNDKAASYEFSPCSGTVLVLRTSKQFVESIEAGQQCGVILDQTNFYAESGGQ 542

Query: 585 IFDEGFIEGLFG---SFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLI 641
            +D GF+         F V  V   GG+V+HIG L   +G   VG+++   +D  RRKL+
Sbjct: 543 TYDTGFMTCETNEDVEFAVTEVHTQGGYVVHIGRLI--SGTLKVGDKLKLAIDEQRRKLV 600

Query: 642 APNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQI 701
             NHT TH+LNFALR+VL    DQ+GS+V P++LRFDF++ KP+ P  ++  E    E I
Sbjct: 601 MNNHTGTHILNFALRKVLTAEADQRGSLVAPDRLRFDFANKKPMSPAEVKAAEQSAVELI 660

Query: 702 KAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISA 761
               +V++K++ L+ AK I GLRAVF E YPDPVRVV+IG  V+DL+ADP +      S 
Sbjct: 661 SKNGEVYAKDSPLSLAKAIQGLRAVFNETYPDPVRVVSIGVPVDDLMADPSSPAGSLTSI 720

Query: 762 ELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV------ 815
           E CGGTHL        F + +EE IAKGIRRI A+T   A KA + A   + EV      
Sbjct: 721 EFCGGTHLKRAGHVGDFVITTEEAIAKGIRRIVALTGPEAAKALKKAEHYQNEVNRIKAE 780

Query: 816 ---------------------DDASKIEGSLLEKNQVRKAQKKVAEE-------NLQKAV 847
                                ++ S+   S  +K+++R   K + ++       N  +A 
Sbjct: 781 GAKVTQAAQGKELVKQLVELTEEISQSNISYWKKDELRTELKNLKKQLDDLDRSNKAQAQ 840

Query: 848 KVATETAEAAASNGK--PFCISRVEVGLDAAAVREAVLKVIE--QKGMPVMVFSTDETTN 903
           ++A E  +      K   + +  +EVG +A A+ +A LK +         M FS D    
Sbjct: 841 QMAIENVKKLLEEKKDSEYIVHALEVGDNAKAL-DAALKQVRTITPNAAAMFFSCDAEKG 899

Query: 904 KAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLA 963
           K +  + VP K   ++ L  + W+    + + G+   G+   A   G + + +  A+++A
Sbjct: 900 KVICLSSVP-KGIVARGLTANGWIKEVSEVIGGKGSVGREESAQAIGNNVSSLDKALEVA 958

Query: 964 AEFAAMKL 971
             FA +KL
Sbjct: 959 HNFAKLKL 966


>gi|449017733|dbj|BAM81135.1| alanine--tRNA ligase cytoplasmic [Cyanidioschyzon merolae strain
           10D]
          Length = 1061

 Score =  840 bits (2170), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 457/969 (47%), Positives = 600/969 (61%), Gaps = 78/969 (8%)

Query: 47  AMPGADPQVVE--WPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKP 104
           A P AD       WP+++VR TF  +F D+ H   +SSPVVP +DPTLLF NAGMNQ+KP
Sbjct: 10  AAPSADAPTTPACWPSSRVRQTFIDYFIDRGHTFVESSPVVPFDDPTLLFTNAGMNQFKP 69

Query: 105 IFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK 164
           +FLG  DP + L  L RACNTQKC+RAGGKHNDLDDVG+DTYHHTFFEMLGNWSFGDYF 
Sbjct: 70  LFLGRVDPTSPLFGLKRACNTQKCVRAGGKHNDLDDVGRDTYHHTFFEMLGNWSFGDYFN 129

Query: 165 NEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCK 224
            EAI WAW+LLT+VY L  D+LYATYFGGD    L  D + RD WL++LP  RVLPFG K
Sbjct: 130 AEAINWAWDLLTRVYGLDPDQLYATYFGGDAANQLPADLDTRDQWLRYLPPERVLPFGTK 189

Query: 225 DNFWEMGDTGPCGPCSEIHYDRTGNR---DAASLVNNDDPTCIEIWNIVFIQFNRESDGS 281
           DNFWEMG+TGPCGPC+EIHYDR   R    AA+LVN    + IEIWN+V IQFNRE DG 
Sbjct: 190 DNFWEMGETGPCGPCTEIHYDRVRGRPAHQAAALVNAGHESLIEIWNLVLIQFNREPDGQ 249

Query: 282 LKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATG-ARPYSGKVGADDA 340
           L+ LPA+HVDTG+G ERL +ILQ K SNYDTD+F P+F AIQ+ +G +  Y+G++GA D+
Sbjct: 250 LRRLPARHVDTGMGLERLCAILQGKSSNYDTDMFAPLFAAIQRESGSSEAYAGRLGATDS 309

Query: 341 DKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNG 400
              D AYRVVADHIRTL+F IADG+ P NEGR YVLRRILRRAVRYG + L A  GF + 
Sbjct: 310 ALTDTAYRVVADHIRTLTFGIADGAVPSNEGRGYVLRRILRRAVRYGQQFLNAPRGFLHR 369

Query: 401 LVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG---KVL 457
           LV  V ++    FPE+  +  +I  +I  EE +F  TL +G+++F + A+ +     +V 
Sbjct: 370 LVPDVARLYQTTFPEVAAKADYIAGVIQEEEMAFSMTLKRGLDRFHETARALVAAGERVF 429

Query: 458 SGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGG--AI 515
            G++AF L+D+ GFPLDLTQ++A ERGL VD+E + + M   R +S +A  K+ G   A+
Sbjct: 430 PGKEAFFLYDSMGFPLDLTQILARERGLEVDVEAYESEMARQRAQSSAAHRKRLGAAEAL 489

Query: 516 VMDADATAALHKRGVLA-TDDSFKFIWFQDHKSVIKAIYTGSE-FIESVVPGNE--VGIV 571
           V+  +  A L ++  ++ TDDS K+ W++  +  + AIY GSE F+ +   G++  VG++
Sbjct: 490 VLGPEPLAVLSEQWKISPTDDSHKYQWYEPLECTVLAIYAGSEGFLPAAETGDDACVGVI 549

Query: 572 LASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVIC 631
           L  + FYAE GGQ+ D G ++     F+V NVQ +GG+V+HIG      GR +VGE VI 
Sbjct: 550 LDRTPFYAEAGGQVADTGRLD---ERFHVINVQSFGGYVVHIGY-----GRIAVGERVIA 601

Query: 632 KVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLR 691
            VDY+RR L+APNHT TH+LN+A+ +VLG   DQKGS+V  +KLRFDF++G+ +    L 
Sbjct: 602 HVDYERRALVAPNHTATHILNWAIWQVLGQQCDQKGSLVDEQKLRFDFAYGRGLTAAELE 661

Query: 692 RIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADP 751
           RIE    E I     V++++ +L  AK I  LRAVFGE YP  VRVV IG  VE +LA P
Sbjct: 662 RIEQCCREVIARNFVVYTQQVSLTTAKQIRSLRAVFGETYPSEVRVVCIGAPVEKVLAAP 721

Query: 752 ENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSL 811
              +W   S ELCGGTHL  T EA AF L+ E  IAKGIRR+ A T   A +    A  L
Sbjct: 722 VQSDWDQYSIELCGGTHLQRTGEAHAFCLVEEGAIAKGIRRVVARTGASALECMALARGL 781

Query: 812 EKEVD-----------------DASKIEGSLL---------------EKNQV-------- 831
              +                  DAS     LL               EK ++        
Sbjct: 782 ASRLPPVPVGSAAENGASGASVDASMPPVDLLTTLAESLKAITISASEKERLRQRLDYWE 841

Query: 832 ---RKAQKKVAEENLQ----KAVKVATETAEAAASNGK--PFCISRVEVGLDAAAVREAV 882
              RK  K+VA    Q    + V++     + A S  +  P  ++ + +  D   ++  +
Sbjct: 842 RMARKQAKQVAAAREQALVDELVRLVNNPQQDAGSPVRQVPVVVAALPIDGDRRILQGML 901

Query: 883 LKVIEQKGMPV--MVFSTDETTNKAVV-CAGVPEKSDQSKQLEVSEWLTAALQPLKGRCG 939
              +++ G  V  ++ ++ E  ++ +V C    E   Q   L+ S WLT  L P  GR G
Sbjct: 902 QSALKRLGSGVWALLIASPERNDECLVGCVAAYEA--QRAGLDCSRWLTETLAPWHGR-G 958

Query: 940 KGKGGLASG 948
            GK   A G
Sbjct: 959 GGKPDAARG 967


>gi|341896461|gb|EGT52396.1| hypothetical protein CAEBREN_18885 [Caenorhabditis brenneri]
          Length = 966

 Score =  839 bits (2168), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 465/968 (48%), Positives = 611/968 (63%), Gaps = 72/968 (7%)

Query: 60  ATKVRDTFFKFF-EDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSK 118
           A++VR TF  FF E K H    SS V+P +DPTLLFANAGMNQ+KP+FLG ADPN+ L+K
Sbjct: 6   ASEVRSTFINFFREKKEHTYVHSSSVIPHDDPTLLFANAGMNQFKPLFLGIADPNSDLAK 65

Query: 119 LTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKV 178
           L RA NTQKCIRAGGKHNDLDDVGKD YHHT+FEMLGNWSFGDYFK E I WAWELLT V
Sbjct: 66  LKRAVNTQKCIRAGGKHNDLDDVGKDVYHHTYFEMLGNWSFGDYFKKEIITWAWELLTTV 125

Query: 179 YRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCG 237
           Y +PA+RLY + FGGDE  G+  D EARDIW    +P  R+L FG KDNFWEMGD GPCG
Sbjct: 126 YGIPAERLYVSVFGGDEANGVPADTEARDIWRSVGVPDERILNFGMKDNFWEMGDVGPCG 185

Query: 238 PCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFE 297
           PCSEIHYDR GNRDA+ LVN DDP  +EIWN+VFIQFNRE  G+LKPLPAKH+D GLG E
Sbjct: 186 PCSEIHYDRIGNRDASHLVNADDPMVVEIWNLVFIQFNREEGGALKPLPAKHIDCGLGLE 245

Query: 298 RLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTL 357
           RL +++Q+K SNYDTD+F PIF+AI + +G R Y+G +G +D D VDMAYRVV DHIRTL
Sbjct: 246 RLIAVMQDKTSNYDTDIFQPIFEAIHKGSGVRKYTGLIGDEDKDGVDMAYRVVGDHIRTL 305

Query: 358 SFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELK 417
           + A++DG  P N GR YVLRRILRR +RY +E L AQ GFF  LV +V+ ++G+ FPEL 
Sbjct: 306 TIALSDGGRPDNSGRGYVLRRILRRGIRYATEKLNAQPGFFASLVPVVISILGETFPELS 365

Query: 418 QREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG--KVLSGQDAFILWDTYGFPLDL 475
           +    + +II  EE  F KTL +G   F+KA   +    K   G  A+ L+DTYGFP DL
Sbjct: 366 RDPETVMDIINDEEKQFLKTLSRGRVLFQKAVDSLPAGTKTFPGDIAWRLYDTYGFPADL 425

Query: 476 TQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAG---GAIVMDADATAALHKRGVLA 532
           TQLMAEE+GL VDI  F    DEAR+++    +  AG     + +D  A A L ++GV  
Sbjct: 426 TQLMAEEKGLSVDISAF----DEARKKAVETSSAGAGKFRDTLDLDVHALAELQQKGVPT 481

Query: 533 TDDSFKFIW------------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAE 580
           TDD+ K+ +            F+     I AI    +F++ +V G E  ++L  ++FYAE
Sbjct: 482 TDDTPKYAYSFTGEGAEAVYKFEPCIGKILAIRRDGKFVDQLVAGEEGALLLDRTNFYAE 541

Query: 581 QGGQIFDEGFIEGL---FGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDR 637
           QGGQI+D G +  +      F V N Q+ GG+++ +GS     G F+VG+EV  + D DR
Sbjct: 542 QGGQIYDVGVLTKVNDESNEFNVNNCQVRGGYIVLVGS---AEGSFAVGDEVNQRFDEDR 598

Query: 638 RKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIV 697
           ++LI  NHT TH+LN+ALR+VL D  DQKGS+V P+++RFDF++   +  + +++ E   
Sbjct: 599 KQLIMKNHTGTHVLNYALRKVLSDS-DQKGSLVAPDRMRFDFTNKAAMTSDQVKQAEEYA 657

Query: 698 NEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWL 757
            + I  +  V++K + L++AK INGLRA+F E YPDPVRVVA+G  VE LL +PE +E  
Sbjct: 658 QQLIDTKGQVYAKNSPLSDAKRINGLRAMFDETYPDPVRVVAVGTPVEQLLQNPEAEEGQ 717

Query: 758 SISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDD 817
           + + E CGGTHL N        + SEE IAKGIRRI A+T   A +A   A  LE  + +
Sbjct: 718 NTTVEFCGGTHLQNVSHIGRIVISSEEAIAKGIRRIVALTGPEAERAIARADRLEARLLE 777

Query: 818 ASKI---EGSLLEKNQVRKAQKKVAE----------------------ENLQK------- 845
            SK    +  L  K++ ++ QKK+ E                      +++QK       
Sbjct: 778 ESKQAKDQTLLANKDKFKELQKKIQEIVDEANGAQLPSWRKDALRKKAKDIQKDMDGYSK 837

Query: 846 ------AVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTD 899
                 A KV  E  E AA++ +P  +  V      +   +  LK+++     VM FS +
Sbjct: 838 AQQAAVAEKVLGEAKELAAASEQPAVLVHVFTSNANSKAIDNALKLLKDT-KAVMAFSVN 896

Query: 900 ETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPA 959
           E T K V+C    +KS  S  L+ +EW+      L G+ G GK   A   G +  ++  A
Sbjct: 897 EDTGK-VLCLAKVDKSLVS-NLKANEWINEVCTVLGGKGG-GKDANAQLTGENVDKLDAA 953

Query: 960 MDLAAEFA 967
           ++LA +FA
Sbjct: 954 VELAQKFA 961


>gi|321260042|ref|XP_003194741.1| alanine-tRNA ligase [Cryptococcus gattii WM276]
 gi|317461213|gb|ADV22954.1| Alanine-tRNA ligase, putative [Cryptococcus gattii WM276]
          Length = 1012

 Score =  839 bits (2168), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 478/996 (47%), Positives = 617/996 (61%), Gaps = 48/996 (4%)

Query: 10   TASFVATARVLLNPSLTLAVTNHHHSLISRFSASAVAAMPGADPQVVEWPATKVRDTFFK 69
            T+ F    R L   S  ++       + +    +     P A P   +WPA KVR TF  
Sbjct: 12   TSHFKFAPRFLSKASFAVSTRPSSKKMGANDKPAVPTTAPHAWPSPEDWPAAKVRQTFID 71

Query: 70   FFEDK---NHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRACNTQ 126
            +F ++    H  W SS V+P +D TLLFANAGMNQYKP+FLGTADP ++LSKL RA N+Q
Sbjct: 72   YFVNQPGFEHTFWPSSGVIPFDDDTLLFANAGMNQYKPLFLGTADPKSELSKLIRAANSQ 131

Query: 127  KCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLPADRL 186
            KCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK  A+  AW+LLT+VY LP DRL
Sbjct: 132  KCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKLGALTMAWDLLTRVYGLPKDRL 191

Query: 187  YATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGPCSEIHYD 245
            Y TYF GD K GL PD+EA+ IW    +P S +LP   KDNFWEMG TGPCGPCSEIH+D
Sbjct: 192  YVTYFEGDAKQGLEPDSEAQQIWRDLGVPESHILPGNAKDNFWEMGATGPCGPCSEIHFD 251

Query: 246  RTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQN 305
            R G R+AA LVN DDP  +EIWN VFIQ+NRE  G L+ LPAKHVDTG+GFERL S+L N
Sbjct: 252  RIGGREAAHLVNADDPNVLEIWNNVFIQYNREPSGELRTLPAKHVDTGMGFERLVSVLHN 311

Query: 306  KMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGS 365
              SNYDTDVF PIF  IQ+ TGARPY GK+G +D D +D AYRV+ADHIRTL+ AI+DG 
Sbjct: 312  VSSNYDTDVFTPIFSKIQELTGARPYEGKLGDEDKDGIDTAYRVIADHIRTLTIAISDGG 371

Query: 366  CPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFPELKQREAHIR 424
             P  +GR YVLRR+LRR VRY S     + G FF+ LV  VV+ +G +FPE+ ++   + 
Sbjct: 372  IPDKDGRGYVLRRVLRRGVRYASNKFGVKIGTFFSSLVPTVVESLGPIFPEVTKKIPELI 431

Query: 425  EIIAAEEASFGKTLLKGIEKFKKAAQDV---QGKVLSGQDAFILWDTYGFPLDLTQLMAE 481
            EI+  EEASF +TL +G   F K A      +  VLSG+D + L+DTYGFP+DLTQ+MAE
Sbjct: 432  EILNEEEASFARTLTRGEALFNKYATTAIAEKRTVLSGKDIWRLYDTYGFPVDLTQIMAE 491

Query: 482  ERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR-GVLATDDSFKFI 540
            ERGL +D E F  A  E+ E S++   ++AG  + +D    AAL     V  TDDSFK+ 
Sbjct: 492  ERGLKIDQEAFEKARLESLEASKAGGKEKAGAQVKLDVHDLAALEANDAVPKTDDSFKYN 551

Query: 541  WFQDHKSVIKAIYTGSEFIES---VVPGNEVGIVLASSSFYAEQGGQIFDEGFIE-GLFG 596
               D K+ +K+IY  S+F+ S   + P    GI+L  ++FYAE GGQ +D G I      
Sbjct: 552  -LDDIKASVKSIYHNSKFLNSTSELPPNTTFGILLDRTNFYAESGGQEYDTGVIAIDDKA 610

Query: 597  SFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALR 656
             F V +VQ+Y G+V+HIG + E  G   VG+EVIC  D  RR  I  NHT TH+LNFALR
Sbjct: 611  EFKVEDVQVYNGYVLHIGRMEE--GEIEVGDEVICTYDELRRWPIRNNHTGTHILNFALR 668

Query: 657  EVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAE 716
            EVLGDH+DQKGS+V P KLRFDFSHGK +    L +IE+I N+ IK  + V++K+  LAE
Sbjct: 669  EVLGDHIDQKGSLVAPTKLRFDFSHGKSIAVPELIKIEAICNDWIKKGVPVYAKDMPLAE 728

Query: 717  AKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAE 776
            A  I GLRAVFGE YPDPVRVV +G  +E++  + E+  W   S E CGGTH++ T + +
Sbjct: 729  AYKIPGLRAVFGEAYPDPVRVVCLGYPLEEISKNVEDARWRQTSIEFCGGTHVAKTDDIK 788

Query: 777  AFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEG------------- 823
             F ++ E  IAKGIRRI AVT   A+         E+++    +++G             
Sbjct: 789  DFVIIEESSIAKGIRRIVAVTGHDAHDVSRKGAEFERKLQRIRELQGKEKELAMKPFLTE 848

Query: 824  ------SLLEKNQVRKAQKKVAEE----------NLQKAVKVATETAEAAASNGKPFCIS 867
                  SL++KN +++  +KV  E             K +  A +       N   F  S
Sbjct: 849  LGQSGISLIKKNSLKEQFEKVQGELVAAAKAKVAADSKIISEAIKIYFQENPNENVFAGS 908

Query: 868  RVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWL 927
              +VG ++  +  AV          V  FS D  T K      +P+   +SK L+   WL
Sbjct: 909  -FDVGGNSKTLTAAVAAGKAASKA-VYAFSADPETGKVAHVNYLPKPILESKALDAKIWL 966

Query: 928  TAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLA 963
                + + G+ G G+   A+G G++  ++  A+ +A
Sbjct: 967  NEVAKVIGGKGG-GRDDSAAGVGSEINKIDEAIVVA 1001


>gi|91084029|ref|XP_966465.1| PREDICTED: similar to alanyl-tRNA synthetase [Tribolium castaneum]
 gi|270006700|gb|EFA03148.1| hypothetical protein TcasGA2_TC013061 [Tribolium castaneum]
          Length = 965

 Score =  838 bits (2166), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 456/971 (46%), Positives = 593/971 (61%), Gaps = 63/971 (6%)

Query: 56  VEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQ 115
           +   A  VR+ +  FF++KNH    SS  +P++DPTLLF NAGMNQ+KPIFLGT DPN+ 
Sbjct: 3   ISMSAKDVRNAYINFFKEKNHDYVHSSSTIPLDDPTLLFTNAGMNQFKPIFLGTVDPNSD 62

Query: 116 LSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELL 175
           L+KLTRA N+QKCIRAGGKHNDLDDVGKD YHHTFFEM+GNWSFGDYFK E   WAWE L
Sbjct: 63  LAKLTRAVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMMGNWSFGDYFKKEICAWAWEFL 122

Query: 176 TKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTG 234
           TK   LP DRLY TYFGGD+ AGL PDNE + IWL   +P S VLP   KDNFWEMG+TG
Sbjct: 123 TKRLHLPGDRLYVTYFGGDKAAGLEPDNECKQIWLGLGVPESHVLPGSMKDNFWEMGETG 182

Query: 235 PCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           PCGPCSE+H+DR G RD   LVN DDP  +EIWN+VFIQ+NRESDGSLK LP KH+D GL
Sbjct: 183 PCGPCSELHFDRIGGRDVPELVNQDDPDVLEIWNLVFIQYNRESDGSLKFLPKKHIDCGL 242

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           G ERL SI+QNK SNYDTD+F+P+FDAIQ+ TGA PY GK+G  D D +DMAYRV+ADH 
Sbjct: 243 GLERLVSIMQNKRSNYDTDLFLPLFDAIQKGTGAPPYGGKIGDADKDGIDMAYRVLADHA 302

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++ A++DG  P N GR YVLRRILRRAVRY +E L A+ GFF+ LVN VV+++GD FP
Sbjct: 303 RTITIALSDGGNPDNTGRGYVLRRILRRAVRYATEKLNAKPGFFSTLVNTVVEILGDTFP 362

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPL 473
           E+ +    I + I  EE  F KTL +G     +    +   K L G  A+ L+DTYGFP+
Sbjct: 363 EVCKDPQSIIDTINEEEEQFLKTLSRGRNLLNRTITKLGDSKTLPGDVAWRLYDTYGFPV 422

Query: 474 DLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGG---AIVMDADATAALHKRGV 530
           DLTQLMAEE+GL VD+  +    +E+++ ++ A   +  G    I +D  A   L   GV
Sbjct: 423 DLTQLMAEEKGLNVDMAVY----EESKKLAQIASQGKGSGVEDTINLDVHAITELQNLGV 478

Query: 531 LATDDSFKFIW-----------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYA 579
             TDD+ K+ +           F+   S + A+    +F+E V  G E GI+L  ++FYA
Sbjct: 479 PPTDDAPKYNYIAGSGINEEYKFELCHSTVIALRHNKQFVEQVHTGQECGILLDKTNFYA 538

Query: 580 EQGGQIFDEGFIEGLFG---SFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYD 636
           EQGGQI+D G+I  +      F V+NVQ+ GG+VIHIGSL    G    G++V   VD  
Sbjct: 539 EQGGQIYDTGYIVKIGDESVEFSVKNVQVRGGYVIHIGSL---EGTLKKGDKVALHVDSA 595

Query: 637 RRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESI 696
           RR+LI  NHT TH+LN+ALR+VLG   DQ+GS+V P++LRFDF++   +  + ++  E  
Sbjct: 596 RRRLIMNNHTGTHVLNYALRKVLGTEADQRGSLVAPDRLRFDFTNKGAMTVDQVKNTELN 655

Query: 697 VNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEW 756
             E I     VF+KE+ LA AK I GLRAVF E YPDPVR+V+IG  VE L  DP     
Sbjct: 656 SKELISRNDQVFAKESNLAVAKTIRGLRAVFEETYPDPVRIVSIGIPVEKLEVDPFGPAG 715

Query: 757 LSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEK--- 813
            + S E CGGTHL  +     F + SEE IAKGIRRI A+T   A KA +    LE    
Sbjct: 716 DNTSIEFCGGTHLKYSGHIGDFVIASEEAIAKGIRRIVALTGPEATKALKRTEYLENCLN 775

Query: 814 ------EVDDASKIEGSLLEK-----NQV--------RKAQKKVAEENLQKAVKVATETA 854
                 E D   +    L++K      +V        +K + + A + L+K +      A
Sbjct: 776 DIKFLVETDKNGEKSKELVKKIVQLTEEVSHAVIPYWKKEEIRNALKTLKKNLDDKERAA 835

Query: 855 EAAASN--------------GKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDE 900
           +AA +N                P  +  ++   +  A+  A+ +V         +F T +
Sbjct: 836 KAAVANQVVDQIKEFVKANPNLPILVKELKAFSNTKALDTALKQVRSLSPSTSALFVTVD 895

Query: 901 TTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAM 960
             +  + C     K    K L+ +EW+ A    L G+ G      A   G+++  V   +
Sbjct: 896 PDSNKMFCLASVSKEGVDKGLKANEWVQAVASKLGGKGGGKADS-AQASGSNSVAVEEIL 954

Query: 961 DLAAEFAAMKL 971
            LA +FA  ++
Sbjct: 955 QLAKQFAESRI 965


>gi|195438477|ref|XP_002067163.1| GK24844 [Drosophila willistoni]
 gi|194163248|gb|EDW78149.1| GK24844 [Drosophila willistoni]
          Length = 967

 Score =  838 bits (2165), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 446/967 (46%), Positives = 589/967 (60%), Gaps = 61/967 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A  VRD +  FF++K H+   SS  +P++DPTLLFANAGMNQ+KPIFLG ADPN+++SK 
Sbjct: 6   AKMVRDAYLGFFKEKKHIYVHSSSTIPLDDPTLLFANAGMNQFKPIFLGIADPNSEMSKW 65

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFGDYFK E   WAWE LT   
Sbjct: 66  VRVANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKEICTWAWEFLTDRL 125

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
           +LP DRLY TYFGGDE +GL PD E + +WL   +    VLP   KDNFWEMG+TGPCGP
Sbjct: 126 KLPKDRLYVTYFGGDEASGLEPDLECKQLWLDLGIKPEHVLPGSMKDNFWEMGETGPCGP 185

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSE+H+DR G R    LVN DDP  +EIWN+VFIQ+NRESDGSLKPLP KH+D G+GFER
Sbjct: 186 CSELHFDRIGGRSVPELVNQDDPDVLEIWNLVFIQYNRESDGSLKPLPKKHIDCGMGFER 245

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S++QNK SNYDTD+F P+F+ IQ +TGA  Y G+VGADD+D +DMAYRV+ADH RT++
Sbjct: 246 LVSVIQNKRSNYDTDLFQPLFEHIQSSTGAPAYQGRVGADDSDGIDMAYRVLADHARTIT 305

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY +E LKA+ G F  LVN VV+++GD FPE+K+
Sbjct: 306 IALADGGTPDNTGRGYVLRRILRRAVRYATEKLKAKPGMFASLVNTVVELLGDAFPEVKK 365

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV--QGKVLSGQDAFILWDTYGFPLDLT 476
              HI +II  EE  F KTL +G     +  + +    K++ G  A+ L+DTYGFP+DLT
Sbjct: 366 DPQHIIDIINEEEQQFLKTLTRGRNLLNRTIEKLGADQKIIPGDVAWRLYDTYGFPVDLT 425

Query: 477 QLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDS 536
           QLMAEE+ L +D+ G+  A   +   S+   + +    I +D  A + L  +GV  T+DS
Sbjct: 426 QLMAEEKSLEIDMAGYEAAKQNSYILSQGKGSSKI-EEINLDVHAISQLQDQGVPTTNDS 484

Query: 537 FKFIW------------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
           FK+ +            ++   S I AI   ++F++S+  G + GIVL +++FYAE GGQ
Sbjct: 485 FKYKYEAESEERDSPYNYETCSSKILAIRFENQFVQSISNGQKAGIVLDNTNFYAESGGQ 544

Query: 585 IFDEGFI---EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLI 641
           I+D+G +         F V  V   GG+++HIG +    G  +VG+++   +D  RR L 
Sbjct: 545 IYDQGALVKANDEANEFLVDRVYNRGGYILHIGVV---EGTLAVGDDLQLHIDVTRRWLT 601

Query: 642 APNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQI 701
             NH+ TH LN  L +VLG   +QKGS+V+PEKLRFDF+    +  E + + E +  + +
Sbjct: 602 MKNHSATHALNHCLLQVLGKDTEQKGSLVVPEKLRFDFNTKGAMTIEQVAKTEELTRQMV 661

Query: 702 KAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISA 761
              + +++KE+ LA AK I GLR+VF EVYPDPVRV++ G  VE L   P  +   + S 
Sbjct: 662 YKNVPIYAKESKLAVAKSIRGLRSVFDEVYPDPVRVISFGVPVEQLEEQPNGEAGDNTSV 721

Query: 762 ELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV------ 815
           E CGGTHL  +     F + SEE IAKGIRRI A+T   A KA + +   E+E+      
Sbjct: 722 EFCGGTHLRRSGHIMDFVISSEEAIAKGIRRIVALTGPEAIKAIKKSEQFEQEIVTLKAT 781

Query: 816 --------DDASKIEGSLLEKNQVRKAQ----KKVAEENLQKAVKVATETAEAA------ 857
                   D    ++  +    Q+  A     KK    NL K++K   +  E A      
Sbjct: 782 IEADTTGKDSKQHVKQIVELTEQISHATIPYVKKDEMRNLLKSLKKTLDDKERALRAAVS 841

Query: 858 ---ASNGKPFC---------ISRVEVGLDAAAVREAVLKVIEQ-KGMPVMVFSTDETTNK 904
                  K  C         + ++E   +  A+  A+ +V  Q      M FS D  + K
Sbjct: 842 VTVVERAKALCEENPTATVLVQQLEAYNNTKALDAALKQVRSQLPDTAAMFFSVDVDSKK 901

Query: 905 AVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAA 964
               + VP KS   K L+ +EW+    Q L G+ G GK   A   GT+   V   + LA 
Sbjct: 902 IFCLSSVP-KSAVEKGLKANEWVQHLSQSLGGKGG-GKPESAQASGTNYESVDEILQLAT 959

Query: 965 EFAAMKL 971
           +FA  KL
Sbjct: 960 KFAQTKL 966


>gi|125987341|ref|XP_001357433.1| GA12250 [Drosophila pseudoobscura pseudoobscura]
 gi|54645764|gb|EAL34502.1| GA12250 [Drosophila pseudoobscura pseudoobscura]
          Length = 966

 Score =  838 bits (2165), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 452/973 (46%), Positives = 596/973 (61%), Gaps = 74/973 (7%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A +VRD +  FF+++ H+   SS  +P++DPTLLFANAGMNQYKPIFLGTADPN+++SK 
Sbjct: 6   AKEVRDAYLGFFKEQKHIYVHSSSTIPLDDPTLLFANAGMNQYKPIFLGTADPNSEMSKW 65

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R CNTQKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFGDYFK E   WAWE LT   
Sbjct: 66  VRVCNTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKEICTWAWEFLTNRL 125

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            LP DRLY TYFGGDE +GL PD E + +WL   L    +LP   KDNFWEMG+TGPCGP
Sbjct: 126 HLPKDRLYVTYFGGDEASGLEPDLECKQLWLDLGLKPEHILPGSMKDNFWEMGETGPCGP 185

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSE+H+DR G R    LVN DDP  +EIWN+VFIQ+NRESDGSLK LP KH+D G+GFER
Sbjct: 186 CSELHFDRIGGRSVPELVNMDDPDVLEIWNLVFIQYNRESDGSLKQLPKKHIDCGMGFER 245

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S++QNK SNYDTD+F+P+F+AIQ  TGA  Y G+VGADD D +DMAYRV+ADH RT++
Sbjct: 246 LVSVIQNKRSNYDTDLFVPLFEAIQAGTGAPAYQGRVGADDVDGIDMAYRVLADHARTIT 305

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY +E L A+ GFF  LVN VV ++GD FPE+K+
Sbjct: 306 IALADGGTPDNTGRGYVLRRILRRAVRYATEKLNAKPGFFGTLVNTVVDLLGDAFPEVKK 365

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK-VLSGQDAFILWDTYGFPLDLTQ 477
              HI +II  EE  F KTL +G     +  + +  + ++ G  A+ L+DTYGFP+DLTQ
Sbjct: 366 DPQHIIDIINEEELQFLKTLTRGRNLLNRTIEKLGSQSIIPGDVAWRLYDTYGFPVDLTQ 425

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA-----IVMDADATAALHKRGVLA 532
           LMAEE+ L +D+ G+  A      +  S    Q  GA     I +D  A + L ++GV  
Sbjct: 426 LMAEEKSLEIDMAGYEAA------KQNSYVLSQGKGASKIEEINLDVHAISQLQEQGVPP 479

Query: 533 TDDSFKFIW------------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAE 580
           T+DSFK+ +            +Q+  S I A+   ++F+  +  G + GIVL  ++FYAE
Sbjct: 480 TNDSFKYKYEAVSEERDSAYNYQECTSKIVALRFENQFVNEISNGQKAGIVLDKTNFYAE 539

Query: 581 QGGQIFDEGFIEGL---FGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDR 637
            GGQIFD+G +  L      F V  V   GG+++HIG +    G   VG+E+   +D +R
Sbjct: 540 SGGQIFDQGALVKLNDEANEFLVDRVYNRGGYILHIGVV---EGTLKVGDELQLHIDEER 596

Query: 638 RKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIV 697
           R L   NH+ TH LN  L +VLG   +QKGS+V+PEKLRFDF+    +  E + + E + 
Sbjct: 597 RWLTMKNHSATHALNHCLLQVLGKDTEQKGSLVVPEKLRFDFNTKAAMTIEQVAKTEQLT 656

Query: 698 NEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWL 757
            + +   + +++KE+ LA AK I GLR+VF EVYPDPVRV++ G  V++L  +P+ +   
Sbjct: 657 KDMVYKNVPIYAKESKLALAKRIRGLRSVFDEVYPDPVRVISFGVPVDELEQNPDAEAGE 716

Query: 758 SISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV-- 815
             S E CGGTHL  +     F + SEE IAKGIRRI A+T   A KA + + + E+E+  
Sbjct: 717 QTSVEFCGGTHLRRSGHIMDFVISSEEAIAKGIRRIVALTGPEALKAIKKSEAFEQEIVK 776

Query: 816 ------------DDASKIEGSLLEKNQVRKAQ----KKVAEENLQKAVK----------- 848
                       D  S ++  +    Q+  A     KK    NL K +K           
Sbjct: 777 LKATIDADKSGKDSKSHVKEIVELTEQISHATVPYVKKDEMRNLLKGLKKTLDDKERSLR 836

Query: 849 --VATETAEAA-----ASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMP---VMVFST 898
             V+    E A     A+ G    + ++E   +  A+  A+ +V  Q  +P    M FS 
Sbjct: 837 AAVSVNVVERAKELCEANPGANVLVQQLEAFNNTKALDAALKQVRTQ--LPDAAAMFFSV 894

Query: 899 DETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTP 958
           D  + K    + VP KS   K L+ +EW+   + P  G  G GK   A   G++  +V  
Sbjct: 895 DADSKKIFCLSSVP-KSAVEKGLKANEWVQ-HVSPTLGGKGGGKPESAQASGSNYDRVEE 952

Query: 959 AMDLAAEFAAMKL 971
            + LA +FA  KL
Sbjct: 953 IIQLATKFAQSKL 965


>gi|426197443|gb|EKV47370.1| hypothetical protein AGABI2DRAFT_192563, partial [Agaricus bisporus
           var. bisporus H97]
          Length = 954

 Score =  838 bits (2164), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 453/948 (47%), Positives = 595/948 (62%), Gaps = 46/948 (4%)

Query: 58  WPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLS 117
           W A ++RD FF +F  +NH    SSP +P  DPTLLFANAGMNQYK IFLGT DPN+  +
Sbjct: 10  WTAPRIRDAFFDYFRARNHSFVPSSPTIPYEDPTLLFANAGMNQYKSIFLGTVDPNSDHA 69

Query: 118 KLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTK 177
           KL RA N+QKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK EA+ ++WE+LT+
Sbjct: 70  KLRRAFNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAVGYSWEVLTE 129

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWL-KFLPASRVLPFGCKDNFWEMGDTGPC 236
           VY+LP DRLY TYF GD K GL PD EA+  WL + +    +LP   KDNFWEMG TGPC
Sbjct: 130 VYKLPKDRLYVTYFEGDPKTGLEPDLEAKQYWLDQGVDEDHILPGNAKDNFWEMGATGPC 189

Query: 237 GPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGF 296
           GPCSEIH+DR G R+AA LVN DDP  +EIWN V+IQFNRE DGSL+PLP+KHVDTGLGF
Sbjct: 190 GPCSEIHFDRIGGRNAAHLVNKDDPDVLEIWNNVYIQFNREEDGSLRPLPSKHVDTGLGF 249

Query: 297 ERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRT 356
           ERL SI+Q+K SNYDTDVF+P+F  IQ+ TG RPY GK G +D D +D AYRVVADH+RT
Sbjct: 250 ERLVSIIQDKHSNYDTDVFLPLFTRIQELTGVRPYQGKFGEEDTDGIDTAYRVVADHVRT 309

Query: 357 LSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFPE 415
           L+FA++DG  P N GR YVLRRILRR  R+  + L    G FF+ LV  V++ MG VFPE
Sbjct: 310 LTFALSDGGVPNNIGRGYVLRRILRRGSRFARKKLGVPIGSFFSSLVPTVIETMGTVFPE 369

Query: 416 LKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTYGFP 472
           + ++   I+EI+  EE SF +TL +G    +++ K A++   ++L G+D + L+DTYGFP
Sbjct: 370 ITKKYDEIKEILDEEEESFSRTLDRGEKLFDQYAKRAKEQGLQLLDGKDVWRLYDTYGFP 429

Query: 473 LDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR-GVL 531
           +DLT LMAEE GL ++ + F+ A   ++E S+    K     + +D    A L K   V 
Sbjct: 430 VDLTLLMAEEMGLGINQKEFDEAQAWSKEASKGPTKKGVSDMVKLDVHDIATLEKNPNVP 489

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESV--VPG-NEVGIVLASSSFYAEQGGQIFDE 588
            T+DS KF    +  + IKAI+    F+ S   +PG    G++L  +SFYAE GGQ +D 
Sbjct: 490 KTNDSAKF-GTGNITATIKAIFHNKAFVSSTENIPGYGTFGLLLDKTSFYAEAGGQEYDT 548

Query: 589 G--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
           G   I+G+   F V NVQ+Y G+V+H G L  GA    VG EVI   D  RR  +  NHT
Sbjct: 549 GNIVIDGV-ADFEVTNVQVYKGYVLHTGYLKYGA--LEVGNEVISSYDELRRWPLRNNHT 605

Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD 706
            TH+LNF+LRE+LGDH+DQKGS+V P KLRFDFSH   +    L +I+ +  + I+  + 
Sbjct: 606 GTHILNFSLREILGDHIDQKGSLVAPSKLRFDFSHKSQISLSELAKIQEMCTDWIRRNVK 665

Query: 707 VFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGG 766
           V+ K+  L  A  I GLRAVFGE YPDPVRVV++   V+++  D EN +W   S E CGG
Sbjct: 666 VYGKDLDLQTAYKIPGLRAVFGESYPDPVRVVSLEYDVDEIAKDIENPKWRQTSIEFCGG 725

Query: 767 THLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLL 826
           TH++ T + +   ++ E GIAKGIRRI AVT   A+   + A +    +++  ++ G   
Sbjct: 726 THVARTGDIKDIVVVEESGIAKGIRRIVAVTGQEAHDVTQLADTFRDRLNNLERLSGKEK 785

Query: 827 EKNQ--------------VRKAQKKVAEENLQKAVKVATETAEAAA-------------S 859
           + N                RKA  K     ++KA     +  EAAA             S
Sbjct: 786 DANLKAFAVELGQAEISVTRKADLKERLAAIRKAFDKQVKEKEAAANKEAIDHVIKYFES 845

Query: 860 NGKP-FCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQS 918
           N K    I  V+V  +A  ++  V +   + G  V VFS D ++ K V        S + 
Sbjct: 846 NEKAEVFIGTVDVEGNAKILQNIVSQA-RKLGKAVYVFSLDPSSGK-VSHVNFLSNSLKE 903

Query: 919 KQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEF 966
           K  +   W T   + L G+ G GK   A G G ++ ++  A+++A  +
Sbjct: 904 KGADARVWATKVSEILGGKAG-GKDDSAQGMGINSDRLEEALEVAQSY 950


>gi|321477760|gb|EFX88718.1| hypothetical protein DAPPUDRAFT_191289 [Daphnia pulex]
          Length = 987

 Score =  838 bits (2164), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 469/973 (48%), Positives = 603/973 (61%), Gaps = 69/973 (7%)

Query: 60  ATKVRDTFFKFF-EDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSK 118
           A K+R  +  FF E K+H+   SS  +P +DPTLLFANAGMNQ+KP+FLGT DPN+ +SK
Sbjct: 7   AAKIRQMYMDFFIEKKSHIYVHSSSTIPKDDPTLLFANAGMNQFKPLFLGTVDPNSDMSK 66

Query: 119 LTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKV 178
             R  NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFGDYFK E   WAWELLT V
Sbjct: 67  WIRVVNTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKEVCTWAWELLTDV 126

Query: 179 YRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCG 237
           ++LP DRLY TYFGG+E AGL PD E R IWL   LPA R+LP   KDNFWEMGD GPCG
Sbjct: 127 FQLPKDRLYVTYFGGNENAGLQPDEECRQIWLSLGLPAERILPGSMKDNFWEMGDVGPCG 186

Query: 238 PCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFE 297
           PCSEIH+DR G RDAA LVN DDP  +EIWN+VF+ FNRE+D SLKPLP KH+D G+GFE
Sbjct: 187 PCSEIHFDRIGGRDAAHLVNMDDPDVLEIWNLVFMTFNRETDSSLKPLPRKHIDCGMGFE 246

Query: 298 RLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTL 357
           RL S++Q+K SNYDTD+F PIF+AIQ+ T A  Y GKVGA+D + VDMAYRV+ADH RTL
Sbjct: 247 RLVSVIQDKRSNYDTDIFQPIFEAIQKGTNAPAYQGKVGAEDVNGVDMAYRVLADHARTL 306

Query: 358 SFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELK 417
           + A++DG  P N GR YVLRR+LRR VRY +E L A+ GFF  LV  V +V+G  FPE+ 
Sbjct: 307 TIALSDGGRPDNVGRGYVLRRVLRRGVRYATEKLNAKPGFFASLVPTVCQVLGPTFPEVN 366

Query: 418 QREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK-VLSGQDAFILWDTYGFPLDLT 476
           +    + +II  EE  F KTL +G +  ++    + G+  L G  A+ L+DTYGFP+DLT
Sbjct: 367 RDPQLVIDIINDEETQFLKTLTRGRDLLERTISKLNGQTTLPGDVAWRLYDTYGFPVDLT 426

Query: 477 QLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAG--GAIVMDADATAALHKRGVLATD 534
           QLM+EE+GL +D+  +  A  +A+  S   Q K +G    I  D  A   L  +GV  TD
Sbjct: 427 QLMSEEKGLSIDMVAYEEAKKQAQLLS---QGKGSGVDDTIAFDVHAITELQNKGVPPTD 483

Query: 535 DSFKFIW------------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQG 582
           DSFK+ +            F    S + AI     F E V  G E GI+L  +SFYAE G
Sbjct: 484 DSFKYNYKSVSDAVDSPYEFDVCTSKVIAIRFQKAFHEEVSSGVECGILLDRTSFYAESG 543

Query: 583 GQIFDEGFIEGLFG---SFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRK 639
           GQ +DEGFI  +      F V+NVQ+ GG+VIH+G++    G   VG+EV   +D  RR+
Sbjct: 544 GQAYDEGFITKIGDEGTEFTVKNVQVRGGYVIHLGNVE---GTLRVGDEVKLSIDQSRRR 600

Query: 640 LIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNE 699
           LI  NHT TH+LN+ALR+V+G+  DQ+GS+V P+++RFDF++   +  + +++ E I NE
Sbjct: 601 LIMSNHTGTHVLNYALRQVVGNEADQRGSLVAPDRMRFDFTNKAAMTVDQVKQTERIANE 660

Query: 700 QIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSI 759
            I+   +V++KE++L  AK + GLRAVF E YPDPVRVV+IG  VE L ADP N    S 
Sbjct: 661 MIRKNQEVYAKESSLVVAKAVQGLRAVFEETYPDPVRVVSIGIPVEQLEADPANPAGNST 720

Query: 760 SAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---- 815
           S E CGGTH+  +     F + +EE IAKGIRRI A+T   A KA + A  L+KEV    
Sbjct: 721 SIEFCGGTHVKRSGHIGDFVISAEEAIAKGIRRIVAITGPEASKALKKADLLQKEVDAVS 780

Query: 816 ---------------------------DDASKIEGSLLEKNQVRKAQK--KVAEENLQKA 846
                                      DD S+   +  +K+ +R   K  K   +++++A
Sbjct: 781 AKVDAFVSQNDKTLSVKELSRIIVDLSDDVSQANIAYWKKDDLRNILKGLKKRADDVERA 840

Query: 847 VK--VATETAEAAA-----SNGKPFCISRVEVGLDAAAVREAVLKVIE-QKGMPVMVFST 898
           +K  V  + AEAA          PF +       ++ A+  A+ +V         + FS 
Sbjct: 841 IKAAVVNDVAEAAKKLVAEQVNTPFIVHEFNAFSNSKALDGALKQVKSLSPETAAIFFSV 900

Query: 899 DETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTP 958
           D   NK VV A  P K    + L+ +EW+ A +  L    G G  G A   G + A +  
Sbjct: 901 DAEANKIVVLAAAP-KGANDRGLKANEWV-ADVSALLDGKGGGSAGSAQATGNNPAGLAE 958

Query: 959 AMDLAAEFAAMKL 971
           AM  A  FA  KL
Sbjct: 959 AMKKAKAFAQSKL 971


>gi|343428890|emb|CBQ72435.1| probable ALA1-alanyl-tRNA synthetase, cytosolic [Sporisorium
           reilianum SRZ2]
          Length = 990

 Score =  838 bits (2164), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 467/963 (48%), Positives = 599/963 (62%), Gaps = 61/963 (6%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           +WPATKVR+TF  +FE++ H    SS  +P +DPTLLFANAGMNQYKPIFLG ADPN+  
Sbjct: 21  DWPATKVRNTFTGYFEERAHTFVPSSSTIPYDDPTLLFANAGMNQYKPIFLGIADPNSSF 80

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
             + RA N+QKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK EAI+ AWELLT
Sbjct: 81  GSMKRAVNSQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAIQMAWELLT 140

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
           KVY LP DRLY TYF GD K GL PD EARD+WLK  +    +L    KDNFWEMG TGP
Sbjct: 141 KVYGLPKDRLYVTYFEGDAKQGLEPDLEARDLWLKVGVDEDHILTGDAKDNFWEMGATGP 200

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPCSEIHYDR G R+A+ LVN DDP  IEIWN VF+QFNRE DGSL+PLPAKH+DTG+G
Sbjct: 201 CGPCSEIHYDRIGGRNASDLVNKDDPNVIEIWNNVFMQFNREDDGSLRPLPAKHIDTGMG 260

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
           FERL SILQ+K SNYDTDVF PIFD IQQ TGAR Y+GK+GA+D D +D AYRVVADH+R
Sbjct: 261 FERLVSILQDKPSNYDTDVFTPIFDKIQQLTGARAYTGKLGAEDKDGIDTAYRVVADHVR 320

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFP 414
           TL+FAI+DG  P  +GR YVLRRILRR  RY  +  +   G FF+ LV  +V  MG  FP
Sbjct: 321 TLTFAISDGGVPDRDGRGYVLRRILRRGTRYVRKYFQVPIGSFFSQLVPTLVDQMGHFFP 380

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTYGF 471
           E+ ++   ++ I+  EEASF +TL +G    E++   A+    K LSG D + L+DT+GF
Sbjct: 381 EITKKVDDVKAILDEEEASFARTLDRGEKLFEEYAAKAKADGKKELSGNDVWKLYDTFGF 440

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRG-V 530
           P+DLT +MAEE+GL V+ + F  A  E++E S++   K    A+  D      L K   V
Sbjct: 441 PVDLTLIMAEEQGLGVNEKEFEAAQAESKELSKAGGKKGETEAVKFDVHDLGHLEKDASV 500

Query: 531 LATDDSFKFIWFQDHKSVIKAIYTGSEFI-ESVVPGNEV---GIVLASSSFYAEQGGQIF 586
             T D FK+      K+ +KAIY    F  E+   G+     G++L  +  YAE GGQ  
Sbjct: 501 PKTQDDFKY-GVSTVKASVKAIYQDHAFFAETTKIGDRAKNFGVLLDRTCLYAESGGQQA 559

Query: 587 DEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           D G   I+G    F V + Q++ G+V+HIG L    G  ++ +EV    D +RR  +  N
Sbjct: 560 DTGSIVIDGK-TEFVVEDAQVFSGYVLHIGHLKR--GELALNDEVEVSYDQNRRGPLQSN 616

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           HT TH+LNF LREVLGD++DQKGS+V P KLRFDFSH + V+ + L++IE I  + IK +
Sbjct: 617 HTATHILNFGLREVLGDYIDQKGSLVAPTKLRFDFSHKQGVNVQELKKIEDISIDWIKRD 676

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
           + VFSKE  L  A+ I GLRAVFGE YP+PVRVV +   ++ +  D EN +W   S E C
Sbjct: 677 VGVFSKEMPLDVAQKIPGLRAVFGEAYPNPVRVVTLEHDLDTIAGDLENPKWRGTSVEFC 736

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVT----TGLAYKAFEAACSL-------EK 813
           GGTH++ T +   F +  E GIAKGIRRI AVT     G+   A +A   L       E+
Sbjct: 737 GGTHVAKTGDIREFVITEESGIAKGIRRIIAVTGEEAAGVTRVANDAEARLGEIDAITEQ 796

Query: 814 EVDDAS----KIEGSLLEKNQVRKA--------QKKVAEENLQKAVKVATETAEAA---- 857
              DA+      + + L+ + VRKA         +K  +  L+   K  T+   +A    
Sbjct: 797 SAKDAALKAFGTQLAQLDMSVVRKAALNEQFASMRKKLDAGLKAKDKADTKLVVSAVEDH 856

Query: 858 --ASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVP--- 912
             A+      I + +VG +  A+ +A +  +++      +FS +   +   + AG     
Sbjct: 857 FKANPSATSFIHKFDVGANMKAL-QAAMNTVKKMDKTAYLFSQELDAHGTTIAAGTALKA 915

Query: 913 --------EKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAA 964
                    KSDQ+  L   +W+  A Q + G+ G GK   A G G    Q   A+D A 
Sbjct: 916 KVIHVAYVSKSDQNNGLNAKDWIDTAAQHVGGKGG-GKPDSAQGVGDMGGQ---ALDDAI 971

Query: 965 EFA 967
           E A
Sbjct: 972 EAA 974


>gi|296806327|ref|XP_002843973.1| alanyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238845275|gb|EEQ34937.1| alanyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 963

 Score =  838 bits (2164), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 479/966 (49%), Positives = 628/966 (65%), Gaps = 51/966 (5%)

Query: 42  ASAVAAMPGADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQ 101
           A++  + P A  + VEWPA +VRDTF  +F+   H    SS VVP++DPTLLFANAGMNQ
Sbjct: 2   AASTTSQPPAGQETVEWPALRVRDTFLDYFKKNGHTFVPSSSVVPLSDPTLLFANAGMNQ 61

Query: 102 YKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGD 161
           YK IFLGT DPN+  ++L RA N+QKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGD
Sbjct: 62  YKSIFLGTIDPNSDFAQLKRAHNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGD 121

Query: 162 YFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLP 220
           YFK EAI+++WELLTKVY L  +RLY TYF G+E AG+ PD EARDIW    +    +L 
Sbjct: 122 YFKKEAIQFSWELLTKVYGLDPERLYVTYFEGNEGAGVGPDIEARDIWRSVGVKDDHILT 181

Query: 221 FGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDG 280
              KDNFWEMGD GPCGPCSEIHYDR G R+AA LVN DDP  +EIWN VFIQ+NRE D 
Sbjct: 182 GDMKDNFWEMGDQGPCGPCSEIHYDRIGGRNAAHLVNQDDPDVLEIWNNVFIQYNREPDR 241

Query: 281 SLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDA 340
           SL+PLP KH+DTGLG+ERL SILQ+K SNYDTDVF P+F AIQ  TGAR Y+GK GA+D 
Sbjct: 242 SLRPLPNKHIDTGLGYERLVSILQDKSSNYDTDVFTPLFTAIQNITGARRYTGKFGAEDT 301

Query: 341 DKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFN 399
           D +D AYRVVADH+RTL+FAI DG+ P NEGR YV+RR+LRR VRY  + LK + G FF+
Sbjct: 302 DGIDTAYRVVADHLRTLTFAITDGAAPNNEGRGYVVRRVLRRGVRYARKYLKVEIGSFFS 361

Query: 400 GLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV----QGK 455
            LV  +V+ MGD+FPE+K+++  + EI+  EE SF KTL +G  +F+  AQ       GK
Sbjct: 362 KLVPALVEQMGDMFPEIKRKQNDVMEILDEEEVSFAKTLDRGERQFEYYAQQALEAGAGK 421

Query: 456 VLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAI 515
            L G D + L+DT+GFP+DLT+LMAEER L +D   F  A  +A+E S+  Q K A   +
Sbjct: 422 -LHGADVWRLYDTFGFPVDLTRLMAEERQLTIDDAEFEEARLKAKEASK-GQAKTASDLL 479

Query: 516 VMDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESV--VPGNE-VGIVL 572
            +     + L K GV  T+D  KF    +  + IKAI  G E I+S   +P NE +GI+L
Sbjct: 480 KLTVHTLSTLEKNGVPKTNDDAKF-GKGNIVANIKAICHGKEVIDSTKDIPANEQIGIIL 538

Query: 573 ASSSFYAEQGGQIFDEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVI 630
             ++FYAEQGGQ +D G   I+G      V+NVQ+YGG+V+H G +    G FSV + VI
Sbjct: 539 DKTNFYAEQGGQEYDTGKIIIDGQ-AELDVQNVQMYGGYVLHTGFIK--YGNFSVNDSVI 595

Query: 631 CKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHL 690
            + D  RR  I  NHT TH+LNFALREVLGD +DQKGS+V  EKLRFDFSH   V    L
Sbjct: 596 AEYDELRRWPIRNNHTGTHILNFALREVLGDGIDQKGSLVAAEKLRFDFSHKSAVSDSDL 655

Query: 691 RRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLAD 750
            +IE+   + I+    V+S+E  LA A+ I G+RAVFGE YPDPVRVV++G +++++L +
Sbjct: 656 EKIEAKSTDYIRQNCAVYSQEVPLATAREITGVRAVFGETYPDPVRVVSVGVELDEILKN 715

Query: 751 PENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKA------ 804
            ++  W  +S E CGGTH+  T + +   +L E GIAKGIRRI AVT   A++       
Sbjct: 716 VKDPRWEGVSIEFCGGTHVQKTGDIKDLVILEESGIAKGIRRIIAVTGEEAHEVQRVARE 775

Query: 805 -------FEA-ACSLEKEVD------DASKIEGSLLEK----NQVRKAQKKV--AEENLQ 844
                  FE  A   E++ +      D +++  S +EK    NQ  +  KK+  A++  Q
Sbjct: 776 FGERLNRFEKMAAGPERDAEVKSLQVDLNQLTISAVEKAKYRNQFTQIHKKITDAQKAAQ 835

Query: 845 KA-VKVATETAEAAASNGK--PFCISRVEVGLDAAAVREAVLKVIEQ-KGMPVMVFSTDE 900
           KA VK A +   +     K     + ++ +  +  A+ E++  V  +  G  + VF+ D 
Sbjct: 836 KAEVKTAIDAISSYFEQNKDSQSLVIKLPISANQKAISESLAHVKSKLSGKALYVFAAD- 894

Query: 901 TTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAM 960
           T+  A  C   P+ +  +K    +EW +A    + G+ G GK  +A G GT+  +V  A+
Sbjct: 895 TSKVAHGCYVTPDLT--AKGASANEWASAVSGIVGGKAG-GKAPVAIGNGTEVNKVDEAL 951

Query: 961 DLAAEF 966
           D A ++
Sbjct: 952 DEATKY 957


>gi|444314227|ref|XP_004177771.1| hypothetical protein TBLA_0A04580 [Tetrapisispora blattae CBS 6284]
 gi|387510810|emb|CCH58252.1| hypothetical protein TBLA_0A04580 [Tetrapisispora blattae CBS 6284]
          Length = 954

 Score =  837 bits (2163), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 439/863 (50%), Positives = 566/863 (65%), Gaps = 41/863 (4%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           +W A  VR TF  +F+  NH    SSPVVP +DPTLLFANAGMNQYKPIFLGT DP++  
Sbjct: 8   KWTAENVRSTFLDYFKSNNHTFVPSSPVVPFDDPTLLFANAGMNQYKPIFLGTVDPSSDF 67

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
             L RA N+QKCIRAGGKHNDL+DVG+D+YHHTFFEMLGNWSFGDYFK  AI +AW LLT
Sbjct: 68  YSLKRAYNSQKCIRAGGKHNDLEDVGRDSYHHTFFEMLGNWSFGDYFKEGAITFAWNLLT 127

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
           KVY +P++RLY TYF GD   GL PD EA+ +WL   +P   +LP    DNFWEMG+ GP
Sbjct: 128 KVYSIPSERLYVTYFEGDASQGLEPDLEAKQLWLNAGVPEDHILPGDTHDNFWEMGEQGP 187

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPCSEIHYDR G R+A+SLVN DDP  +EIWN+VF+QFNRESD SLK LPA HVDTG+G
Sbjct: 188 CGPCSEIHYDRIGGRNASSLVNQDDPDVLEIWNLVFMQFNRESDHSLKKLPACHVDTGMG 247

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
           FERL S+LQ+  SNYDTDVF P+F  IQ+    RPYSGK GA+D D +D AYRV+ADH+R
Sbjct: 248 FERLVSVLQDVRSNYDTDVFQPLFTRIQEICNVRPYSGKFGAEDKDGIDTAYRVLADHVR 307

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFP 414
           TL+F+I DG  P NEGR YVLRRILRR  RY  + +    G FF+ L   ++  +  +FP
Sbjct: 308 TLTFSITDGGVPNNEGRGYVLRRILRRGARYARKYMNYPIGNFFSTLAPTLIGQVKVIFP 367

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTYGF 471
           E+ +  + + EI+  EEASF KTL +G    EK+ +AA     KVL G+  + L+DTYGF
Sbjct: 368 EVTKDPSFLYEILDEEEASFAKTLDRGEKLFEKYVEAAAQSGTKVLDGKQVWRLYDTYGF 427

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           P+DLT+LMAEE GL +D  GF  A  E+ E S+    K+A   I ++    + L++  V 
Sbjct: 428 PVDLTELMAEEHGLKIDGPGFEKAKQESYEASKRGGKKEADNLIKLNVHTLSQLNEAKVP 487

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVP-GNEVGIVLASSSFYAEQGGQIFDEG- 589
            TDDS K+   +D +S I  I+ GSEF+  +   G   GI+L  + FYAEQGGQ +D G 
Sbjct: 488 KTDDSAKY-GNKDIESTILKIFDGSEFVTEIKEIGKSYGIILDKTCFYAEQGGQEYDTGK 546

Query: 590 -FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
             I+G    F V NVQ+Y GFV H G L +G+   SVG+++I   D  RR  I  NHT T
Sbjct: 547 LVIDGS-SEFNVENVQLYNGFVFHTGILADGS--LSVGDKIIASFDELRRFPIKNNHTGT 603

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+LNFAL+E LG  VDQKGS+V PEKLRFDFSH K V  + L +IE+I N+QI+  L V+
Sbjct: 604 HILNFALKETLGGEVDQKGSLVAPEKLRFDFSHKKAVSLDELAKIEAICNKQIEESLAVY 663

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
            K+  L +A+ I+ +RAVFGE YPDPVRVV++G  VEDL+ DP N++W + S E CGGTH
Sbjct: 664 YKDVPLEKARTISSVRAVFGETYPDPVRVVSVGVPVEDLMEDPTNEKWTNYSVEFCGGTH 723

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK-------- 820
           ++ T + + F ++ E GIAKGIRRI AVT   A++    A      +D A K        
Sbjct: 724 VAKTSDIKFFVIIEESGIAKGIRRIVAVTGTEAFEVQRIANEFNSALDAAEKLPFSPAKE 783

Query: 821 ------------IEGSLLEKNQVR----KAQKKVAEENLQKAVKVATETAEAAASN---- 860
                       +  S++ KNQ++    K +K V +E   +A K   +T +A  +     
Sbjct: 784 KKLKELGVELTQLSISVVTKNQLKAKFTKIEKVVKDEIKARAKKETKQTLDAVQTYFTEN 843

Query: 861 -GKPFCISRVEVGLDAAAVREAV 882
               + +  + +  +A A+ EA+
Sbjct: 844 ADATYFVKHINIPTNAKAITEAI 866


>gi|195155623|ref|XP_002018701.1| GL25810 [Drosophila persimilis]
 gi|194114854|gb|EDW36897.1| GL25810 [Drosophila persimilis]
          Length = 966

 Score =  837 bits (2161), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 451/973 (46%), Positives = 596/973 (61%), Gaps = 74/973 (7%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A +VRD +  FF+++ H+   SS  +P++DPTLLFANAGMNQ+KPIFLGTADPN+++SK 
Sbjct: 6   AKEVRDAYLGFFKEQKHIYVHSSSTIPLDDPTLLFANAGMNQFKPIFLGTADPNSEMSKW 65

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R CNTQKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFGDYFK E   WAWE LT   
Sbjct: 66  VRVCNTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKEICTWAWEFLTNRL 125

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            LP DRLY TYFGGDE +GL PD E + +WL   L    +LP   KDNFWEMG+TGPCGP
Sbjct: 126 HLPKDRLYVTYFGGDEASGLEPDLECKQLWLDLGLKPEHILPGSMKDNFWEMGETGPCGP 185

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSE+H+DR G R    LVN DDP  +EIWN+VFIQ+NRESDGSLK LP KH+D G+GFER
Sbjct: 186 CSELHFDRIGGRSVPELVNMDDPDVLEIWNLVFIQYNRESDGSLKQLPKKHIDCGMGFER 245

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S++QNK SNYDTD+F+P+F+AIQ  TGA  Y G+VGADD D +DMAYRV+ADH RT++
Sbjct: 246 LVSVIQNKRSNYDTDLFVPLFEAIQAGTGAPAYQGRVGADDVDGIDMAYRVLADHARTIT 305

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY +E L A+ GFF  LVN VV ++GD FPE+K+
Sbjct: 306 IALADGGTPDNTGRGYVLRRILRRAVRYATEKLNAKPGFFGTLVNTVVDLLGDAFPEVKK 365

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK-VLSGQDAFILWDTYGFPLDLTQ 477
              HI +II  EE  F KTL +G     +  + +  + ++ G  A+ L+DTYGFP+DLTQ
Sbjct: 366 DPQHIIDIINEEELQFLKTLTRGRNLLNRTIEKLGSQSIIPGDVAWRLYDTYGFPVDLTQ 425

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA-----IVMDADATAALHKRGVLA 532
           LMAEE+ L +D+ G+  A      +  S    Q  GA     I +D  A + L ++GV  
Sbjct: 426 LMAEEKSLEIDMAGYEAA------KQNSYVLSQGKGASKIEEINLDVHAISQLQEQGVPP 479

Query: 533 TDDSFKFIW------------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAE 580
           T+DSFK+ +            +Q+  S I A+   ++F+  +  G + GIVL  ++FYAE
Sbjct: 480 TNDSFKYKYEAVSEERDSAYNYQECTSKIVALRFENQFVNEISNGQKAGIVLDKTNFYAE 539

Query: 581 QGGQIFDEGFIEGL---FGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDR 637
            GGQIFD+G +  L      F V  V   GG+++HIG +    G   VG+E+   +D +R
Sbjct: 540 SGGQIFDQGALVKLNDEANEFLVDRVYNRGGYILHIGVV---EGTLKVGDELQLHIDEER 596

Query: 638 RKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIV 697
           R L   NH+ TH LN  L +VLG   +QKGS+V+PEKLRFDF+    +  E + + E + 
Sbjct: 597 RWLTMKNHSATHALNHCLLQVLGKDTEQKGSLVVPEKLRFDFNTKAAMTIEQVAKTEQLT 656

Query: 698 NEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWL 757
            + +   + +++KE+ LA AK I GLR+VF EVYPDPVRV++ G  V++L  +P+ +   
Sbjct: 657 KDMVYKNVPIYAKESKLALAKRIRGLRSVFDEVYPDPVRVISFGVPVDELEQNPDAEAGE 716

Query: 758 SISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV-- 815
             S E CGGTHL  +     F + SEE IAKGIRRI A+T   A KA + + + E+E+  
Sbjct: 717 QTSVEFCGGTHLRRSGHIMDFVISSEEAIAKGIRRIVALTGPEALKAIKKSEAFEQEIVK 776

Query: 816 ------------DDASKIEGSLLEKNQVRKAQ----KKVAEENLQKAVK----------- 848
                       D  S ++  +    Q+  A     KK    NL K +K           
Sbjct: 777 LKATIDADKSGKDSKSHVKEIVELTEQISHATVPYVKKDEMRNLLKGLKKTLDDKERSLR 836

Query: 849 --VATETAEAA-----ASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMP---VMVFST 898
             V+    E A     A+ G    + ++E   +  A+  A+ +V  Q  +P    M FS 
Sbjct: 837 AAVSVNVVERAKELCEANPGANVLVQQLEAFNNTKALDAALKQVRTQ--LPDAAAMFFSV 894

Query: 899 DETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTP 958
           D  + K    + VP KS   K L+ +EW+   + P  G  G GK   A   G++  +V  
Sbjct: 895 DADSKKIFCLSSVP-KSAVEKGLKANEWVQ-HVSPTLGGKGGGKPESAQASGSNYDRVEE 952

Query: 959 AMDLAAEFAAMKL 971
            + LA +FA  KL
Sbjct: 953 IIQLATKFAQSKL 965


>gi|341876624|gb|EGT32559.1| hypothetical protein CAEBREN_22812 [Caenorhabditis brenneri]
          Length = 983

 Score =  837 bits (2161), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 466/985 (47%), Positives = 612/985 (62%), Gaps = 89/985 (9%)

Query: 60  ATKVRDTFFKFF-EDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSK 118
           A++VR TF  FF E K H    SS V+P +DPTLLFANAGMNQ+KP+FLG ADPN+ L+K
Sbjct: 6   ASEVRSTFINFFREKKEHTYVHSSSVIPHDDPTLLFANAGMNQFKPLFLGIADPNSDLAK 65

Query: 119 LTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKV 178
           L RA NTQKCIRAGGKHNDLDDVGKD YHHT+FEMLGNWSFGDYFK E I WAWELLT V
Sbjct: 66  LKRAVNTQKCIRAGGKHNDLDDVGKDVYHHTYFEMLGNWSFGDYFKKEIITWAWELLTTV 125

Query: 179 YRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCG 237
           Y +PA+RLY + FGGDE  G+  D EARDIW    +P  R+L FG KDNFWEMGD GPCG
Sbjct: 126 YGIPAERLYVSVFGGDEANGVPADTEARDIWRSVGVPDERILNFGMKDNFWEMGDVGPCG 185

Query: 238 PCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFE 297
           PCSEIHYDR GNRDA+ LVN DDP  +EIWN+VFIQFNRE  G+LKPLPAKH+D GLG E
Sbjct: 186 PCSEIHYDRIGNRDASHLVNADDPMVVEIWNLVFIQFNREEGGALKPLPAKHIDCGLGLE 245

Query: 298 RLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTL 357
           RL +++Q+K SNYDTD+F PIF+AI + +G R Y+G +G +D D VDMAYRVV DHIRTL
Sbjct: 246 RLIAVMQDKTSNYDTDIFQPIFEAIHKGSGVRKYTGLIGDEDKDGVDMAYRVVGDHIRTL 305

Query: 358 SFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELK 417
           + A++DG  P N GR YVLRRILRR +RY +E L AQ GFF  LV +V+ ++G+ FPEL 
Sbjct: 306 TIALSDGGRPDNSGRGYVLRRILRRGIRYATEKLNAQPGFFASLVPVVISILGETFPELS 365

Query: 418 QREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG--KVLSGQDAFILWDTYGFPLDL 475
           +    + +II  EE  F KTL +G   F+KA   +    K   G  A+ L+DTYGFP DL
Sbjct: 366 RDPETVMDIINDEEKQFLKTLSRGRVLFQKAVDSLPAGTKTFPGDIAWRLYDTYGFPADL 425

Query: 476 TQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAG---GAIVMDADATAALHKRGVLA 532
           TQLMAEE+GL VDI  F    DEAR+++    +  AG     + +D  A A L ++GV  
Sbjct: 426 TQLMAEEKGLSVDISAF----DEARKKAVETSSAGAGKFRDTLDLDVHALAELQQKGVPT 481

Query: 533 TDDSFKFIW-----------------------------FQDHKSVIKAIYTGSEFIESVV 563
           TDD+ K+ +                             F+     I AI    +F++ +V
Sbjct: 482 TDDTPKYAYSFTGEGAEAVYSKFFHVSKIGSITFSILEFEPCIGKILAIRRDGKFVDQLV 541

Query: 564 PGNEVGIVLASSSFYAEQGGQIFDEGFIEGL---FGSFYVRNVQIYGGFVIHIGSLTEGA 620
            G E  ++L  ++FYAEQGGQI+D G +  +      F V N Q+ GG+++ +GS     
Sbjct: 542 AGEEGALLLDRTNFYAEQGGQIYDVGVLTKVNDESNEFNVNNCQVRGGYIVLVGS---AE 598

Query: 621 GRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFS 680
           G F+VG+EV  + D DR++LI  NHT TH+LN+ALR++L D  DQKGS+V P+++RFDF+
Sbjct: 599 GSFAVGDEVNQRFDEDRKQLIMKNHTGTHVLNYALRKILSDS-DQKGSLVAPDRMRFDFT 657

Query: 681 HGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAI 740
           +   + P+ +++ E    + I  +  V++K + LA+AK INGLRA+F E YPDPVRVVA+
Sbjct: 658 NKAAMTPDQVKQAEEYAQQLIDTKGQVYAKNSPLADAKRINGLRAMFDETYPDPVRVVAV 717

Query: 741 GRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGL 800
           G  VE LL +PE +E  + + E CGGTHL N        + SEE IAKGIRRI A+T   
Sbjct: 718 GTPVEQLLQNPEAEEGQNTTVEFCGGTHLQNVSHIGRIVISSEEAIAKGIRRIVALTGPE 777

Query: 801 AYKAFEAACSLEKEVDDASKI---EGSLLEKNQVRKAQKKVAE----------------- 840
           A +A   A  LE  + + SK    +  L  K++ ++ QKK+ E                 
Sbjct: 778 AERAIARADRLEARLLEESKQAKDQTLLANKDKFKELQKKIQEIVDEANGAQLPSWRKDA 837

Query: 841 -----ENLQK-------------AVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAV 882
                +++QK             A KV  E  E AA++ +P  +  V      +   +  
Sbjct: 838 LRKKAKDIQKYMDGYSKAQQAAVAEKVLGEAKELAAASEQPAVLVHVFTSNANSKAIDNA 897

Query: 883 LKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGK 942
           LK+++     VM FS +E T K V+C    +KS  S  L+ +EW+      L G+ G GK
Sbjct: 898 LKLLKDT-KAVMAFSVNEDTGK-VLCLAKVDKSLVS-NLKANEWINEVCTVLGGKGG-GK 953

Query: 943 GGLASGQGTDAAQVTPAMDLAAEFA 967
              A   G +  ++  A++LA +FA
Sbjct: 954 DANAQLTGENVDKLDAAVELAQKFA 978


>gi|291390471|ref|XP_002711725.1| PREDICTED: alanyl-tRNA synthetase [Oryctolagus cuniculus]
          Length = 945

 Score =  837 bits (2161), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 454/966 (46%), Positives = 601/966 (62%), Gaps = 86/966 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A+++R  F  FF+   H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP   ++KL
Sbjct: 7   ASEIRQRFIDFFKRNEHTYVHSSGTIPLDDPTLLFANAGMNQFKPIFLNTIDPTHPMAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A + A ELLT+ +
Sbjct: 67  SRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
            +P +RLY TY                      L  +++LP   KDNFWEMGDTGPCGPC
Sbjct: 127 GIPIERLYVTY----------------------LDDTKILPGNMKDNFWEMGDTGPCGPC 164

Query: 240 SEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERL 299
           SEIHYDR G RDAA LVN DDP  +EIWN+VFIQ+NRE+DG LKPLP K +DTG+G ERL
Sbjct: 165 SEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNRETDGVLKPLPKKSIDTGMGLERL 224

Query: 300 TSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSF 359
            S+LQNKMSNYDTD+F+P F+AIQ+ TGARPY+GKVGA+D D +DMAYRV+ADH RT++ 
Sbjct: 225 VSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDVDGIDMAYRVLADHARTITV 284

Query: 360 AIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQR 419
           A+ADG  P N GR YVLRRILRRAVRY  E L A  GFF  LV++VV+ +GD FPELK+ 
Sbjct: 285 ALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRGFFATLVDVVVQSLGDAFPELKKD 344

Query: 420 EAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQL 478
              +++II  EE  F KTL +G     +  Q +   K + G  A++L+DTYGFP+DLT L
Sbjct: 345 PDMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDCKTIPGDTAWLLYDTYGFPVDLTGL 404

Query: 479 MAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDDS 536
           +AEE+GL+VD++GF      A+ +S   Q K AGG   I++D  A   L  +G+ ATDDS
Sbjct: 405 IAEEKGLVVDMDGFEEERKLAQLKS---QGKGAGGEDLIMLDIYAIEELRAKGLEATDDS 461

Query: 537 FKFIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFD 587
            K+ +         F+   + + A+     F+E V  G E G+VL  + FYAEQGGQI+D
Sbjct: 462 PKYNYQADSSGSYVFESTVATVLALRREKMFVEEVSTGQECGVVLDKTCFYAEQGGQIYD 521

Query: 588 EGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLI 641
           EG++  +  S      F V+N Q+ GG+V+HIG++    G   VG++V   +D  RR+ +
Sbjct: 522 EGYLVKVDDSSEDKTEFTVKNAQVRGGYVLHIGTVY---GSLRVGDQVRLFIDEPRRRPV 578

Query: 642 APNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQI 701
             NHT TH+LNFALR VLG+  DQKGS+V P++LRFDF+    +  + +++ E I NE I
Sbjct: 579 MSNHTATHILNFALRSVLGE-ADQKGSLVAPDRLRFDFTAKGAMSTQQIKKAEEIANEMI 637

Query: 702 KAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISA 761
            A   V++++  LA AK I GLRAVF E YPDPVRVV+IG  V +LL DP        S 
Sbjct: 638 AAAKPVYTQDCALAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLEDPSGPAGSLTSV 697

Query: 762 ELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSL---------- 811
           E CGGTHL N+  A  F +++EE IAKGIRRI AVT   A KA   A SL          
Sbjct: 698 EFCGGTHLRNSSHAGDFVIVTEEAIAKGIRRIVAVTGAEAQKALRKAESLKKSLSVMEAK 757

Query: 812 -----------EKEVDDASKIEGSLL----EKNQVRKAQKKVAE--ENLQKAVK------ 848
                      +KE+ D  +   + +    +K+++R+  K + +  ++L +A K      
Sbjct: 758 VKAQTAPNKDVQKEIADLGEALAAAVIPQWQKDELRETLKSLKKIMDDLDRASKADVQKR 817

Query: 849 VATETAEAAASN-GKPFCISRVEVGLDAAAVREAVLKVIEQKG--MPVMVFSTDETTNKA 905
           V  +T +   SN  +P  I  +E G  A A+ EA LK+ +        M+F+ D    K 
Sbjct: 818 VLEKTKQLIDSNPNQPLVILEMESGASAKALNEA-LKLFKTHSPQTSAMLFTVDNEAGKI 876

Query: 906 VVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAE 965
                VP+ +  ++ L+ SEW+      + G+ G GK   A   G +   +  A+ LA  
Sbjct: 877 TCLCQVPQNA-ANRGLKASEWVQQVSGLMDGK-GGGKDMSAQATGKNVGCLQEALQLATS 934

Query: 966 FAAMKL 971
           FA ++L
Sbjct: 935 FAQLRL 940


>gi|198437569|ref|XP_002125465.1| PREDICTED: similar to alanyl-tRNA synthetase [Ciona intestinalis]
          Length = 967

 Score =  836 bits (2160), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 450/968 (46%), Positives = 598/968 (61%), Gaps = 65/968 (6%)

Query: 60  ATKVRDTFFKFFEDKN-HVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSK 118
           + ++R  F  FF++K  H    SS  +P++DPTLLFANAGMNQ+K IFLGT  P   LSK
Sbjct: 7   SKQLRQMFLSFFQEKYAHTYIHSSSTIPLDDPTLLFANAGMNQFKSIFLGTISPADPLSK 66

Query: 119 LTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKV 178
             R  N+QKCIRAGGKHNDLDDVGKDTYHHTFFEMLG WSFGDYFK +AI WAWELLT+V
Sbjct: 67  CKRVVNSQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGCWSFGDYFKKDAINWAWELLTEV 126

Query: 179 YRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGP 238
            ++P DRLYATYF G E+  +  D E +++WL+ LPA  +LP   KDNFWEMGD GPCGP
Sbjct: 127 LKIPKDRLYATYFEGSEEYNVPVDTEVQNLWLQHLPADHILPGNMKDNFWEMGDVGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           C+EIH+DR G R+AA LVN DDP  +E+WN+VF+QFNRE DG LK L  +HVDTG+G ER
Sbjct: 187 CTEIHFDRIGGRNAAHLVNMDDPEVLEVWNLVFMQFNREKDGKLKLLAKQHVDTGMGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S++Q K+SNYDTD+F P+F AIQ  TGAR Y GKVG DD D VDMAYRV+ADHIRTL+
Sbjct: 247 LVSVIQGKLSNYDTDMFTPLFKAIQLGTGAREYQGKVGKDDVDGVDMAYRVLADHIRTLT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A++DG  P N GR YVLRRILRRA R+  E L A+  FF+ LV++VV ++G+ FPE+ +
Sbjct: 307 IALSDGGRPDNVGRGYVLRRILRRATRFAVEKLNAKPRFFSSLVHVVVDILGEAFPEIIR 366

Query: 419 REAHIREIIAAEEASFGKTLLKG--IEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLT 476
               + +II  EE  F KTL +G  I   K  + D   KV  G+ A++L+DTYGFP DLT
Sbjct: 367 DPQMVIDIIDEEEEQFLKTLNRGRKILNQKIKSLDADAKVFPGETAWLLYDTYGFPFDLT 426

Query: 477 QLMAEERGLLVDIEGFNNAMDEARERSRS-AQNKQAGGAIVMDADATAALHKRGVLATDD 535
           ++MAEE GL VD E F  A  +AR  S+  AQ+      I +D      L ++    TDD
Sbjct: 427 EIMAEESGLTVDCESFEKAKAQARITSKGFAQD--VADTICLDVHMLTDLKEKKFPPTDD 484

Query: 536 SFKFIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           SFK+ +         F     V+KAI     F+ SV  G E GI+L  + FYAEQGGQ+F
Sbjct: 485 SFKYQYSSNDNGEYSFPACTGVVKAILQNKTFVTSVSSGAECGILLDKTCFYAEQGGQLF 544

Query: 587 DEGFI---EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAP 643
           D G+    E  F  F V+N Q+ GG+V+H+G++   AG   VG+ V   +D  RR+ +  
Sbjct: 545 DLGYFKKQEDEFTEFTVKNCQVQGGYVLHVGTV---AGTLEVGDSVELFIDEQRRQSLMK 601

Query: 644 NHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKA 703
           NH+CTH+LNF LR VLG+  DQ+GS+V P +LRFDF+  K +  + ++  E + N+ +  
Sbjct: 602 NHSCTHILNFGLRCVLGE-ADQRGSLVAPNRLRFDFTAKKAMTSQQVKETEDVCNQIVNK 660

Query: 704 ELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAEL 763
           +  +++K   L +AK I+GLRA+F E YPDPVRV+++G  V+ L+ADP     ++ S EL
Sbjct: 661 DEVIYAKPVPLDQAKAIHGLRAIFDETYPDPVRVLSVGVSVDSLVADPNFDAAMNTSVEL 720

Query: 764 CGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDD-ASKIE 822
           CGGTHL  +  A+ F ++SEE I+KG+RRI AVT   A KA   A  L K  +   S++E
Sbjct: 721 CGGTHLLRSGHADKFIIISEEAISKGVRRIVAVTGQEALKAERKANLLAKSFETIKSEVE 780

Query: 823 GSLLEK-----------------------NQVRKAQKKVAEENLQKAV----KVATETAE 855
             L+                         +Q R+ + +    +L+K V    +V  E A 
Sbjct: 781 KGLVNNKENYKTFSKKCTDFIELVSQASISQWRREEMRGFASSLKKKVDDVDRVMKENAT 840

Query: 856 AAA----------SNGKPFCISRVEVGLDAAAVREAVLKVI--EQKGMPVMVFSTDETTN 903
             A               F ++ ++   +A ++ EA LK+   E     VM+FS D+  N
Sbjct: 841 KLALAQTKESIQQDPNATFVVTELKTNGNAKSLNEA-LKIYKSESPDTSVMLFSIDKEAN 899

Query: 904 KAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLA 963
           K V  + VP  S   K L  + W+ +    L G+ G GK   A   G +   +  A+ LA
Sbjct: 900 KIVCLSQVP-ASANDKGLTANGWVQSIATTLNGK-GGGKSTSAQAVGRNPDGLNEAIQLA 957

Query: 964 AEFAAMKL 971
            EFA +KL
Sbjct: 958 KEFAKVKL 965


>gi|195397897|ref|XP_002057564.1| GJ18196 [Drosophila virilis]
 gi|194141218|gb|EDW57637.1| GJ18196 [Drosophila virilis]
          Length = 967

 Score =  836 bits (2159), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 447/969 (46%), Positives = 595/969 (61%), Gaps = 65/969 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A +VRDT+  FF++K H+   SS  +P++DPTLLFANAGMNQ+KPIFLGTADPN++++K 
Sbjct: 6   AKEVRDTYLNFFKEKQHIYVHSSSTIPLDDPTLLFANAGMNQFKPIFLGTADPNSEMAKW 65

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFGDYFK E   WAWE LT   
Sbjct: 66  VRVANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKEICAWAWEFLTVRL 125

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            LP DRLY TYFGGD  +GL PD E + +WL   L    +LP   KDNFWEMG+TGPCGP
Sbjct: 126 NLPKDRLYVTYFGGDVASGLEPDLECKQMWLDLGLKPEHILPGSMKDNFWEMGETGPCGP 185

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSE+H+DR G R    LVN DDP  +EIWN+VFIQ+NRESDGSLKPLP KH+D G+GFER
Sbjct: 186 CSELHFDRIGGRSVPELVNQDDPDVLEIWNLVFIQYNRESDGSLKPLPKKHIDCGMGFER 245

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S++QNK SNYDTD+F+P+FDAIQ  TGA  Y G+VGADDAD +DMAYRV+ADH RT++
Sbjct: 246 LVSVIQNKRSNYDTDLFVPLFDAIQAGTGAPAYQGRVGADDADGIDMAYRVLADHARTIT 305

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY +E L A+ GFF  LVN VV+++GD FPE+K+
Sbjct: 306 IALADGGNPDNTGRGYVLRRILRRAVRYATEKLNAKPGFFATLVNTVVELLGDAFPEVKK 365

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK--VLSGQDAFILWDTYGFPLDLT 476
               I +II  EE  F KTL +G     +  + +      + G  A+ L+DTYGFP+DLT
Sbjct: 366 DPQQIMDIINEEELQFLKTLTRGRNLLNRTIEKLGANQTTIPGDVAWRLYDTYGFPVDLT 425

Query: 477 QLMAEERGLLVDIEGFNNAMDEARERSRS-AQNKQAGG--AIVMDADATAALHKRGVLAT 533
           QLMAEE+ L +D+ G+    D A++ S   +Q K A     I +D  A + L ++GV  T
Sbjct: 426 QLMAEEKSLQIDMAGY----DAAKQNSYILSQGKGASKIEEINLDVHAISQLQEQGVPPT 481

Query: 534 DDSFKFIW------------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQ 581
           +DSFK+ +            + +  S I A+   ++F++ +  G + GIVL  ++FYAE 
Sbjct: 482 NDSFKYKYEAVSNERDSAYNYSECTSKIVALRYENKFVQEISSGQKAGIVLDKTNFYAES 541

Query: 582 GGQIFDEGFIEGL---FGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRR 638
           GGQI+D+G +  L      F V  V   GG+++HIG +    G  +VG+EV   +D +RR
Sbjct: 542 GGQIYDQGALVKLNDEANEFLVDRVYNRGGYILHIGVVE---GTLAVGDEVQLHIDAERR 598

Query: 639 KLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVN 698
            L   NH+ TH LN  L +VLG   +QKGS+V+PEKLRFDF+    +  E + + E +  
Sbjct: 599 WLTMKNHSATHALNHCLLQVLGKDTEQKGSLVVPEKLRFDFNSKAAMTIEQVAKTEQLTR 658

Query: 699 EQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLS 758
           + +   + +++KE+ LA AK I GLR+VF EVYPDPVRV++ G  V+ L A P+ +    
Sbjct: 659 DMVYKNMPIYAKESQLALAKRIRGLRSVFDEVYPDPVRVISFGVPVDQLEAQPDAEAGEQ 718

Query: 759 ISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVD-- 816
            S E CGGTHL N+     F + SEE IAKGIRRI A+T   A KA + + + ++E+   
Sbjct: 719 TSVEFCGGTHLRNSGHIMDFVISSEEAIAKGIRRIVALTGPEALKALKKSEAFQQEISKL 778

Query: 817 ------DASKIEGSLLEKNQVRKAQ----------KKVAEENLQKAVKVATETAEAA--- 857
                 D +  +  L  K  V   +          KK    NL K++K   +  E A   
Sbjct: 779 QATIEADKTGKDSKLYVKQIVELTEQISHATIPYVKKDEMRNLLKSLKKTLDDKERALRA 838

Query: 858 ------ASNGKPFC---------ISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETT 902
                     K  C         + ++E   +  A+  A+ +V  Q      +F + +  
Sbjct: 839 AVSVTVVERAKALCEANPQANVLVQQLEAYNNTKALDAALKQVRSQLPDAAAMFVSVDAD 898

Query: 903 NKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDL 962
           +K + C     KS   K L+ +EW+   + P+ G  G GK   A   G++  +V   + L
Sbjct: 899 SKKIFCLCSVPKSAVEKGLKANEWVQ-HVSPVLGGKGGGKPESAQASGSNFERVDEIVQL 957

Query: 963 AAEFAAMKL 971
           A +FA  KL
Sbjct: 958 ARKFAQAKL 966


>gi|409080524|gb|EKM80884.1| hypothetical protein AGABI1DRAFT_112599, partial [Agaricus bisporus
           var. burnettii JB137-S8]
          Length = 954

 Score =  836 bits (2159), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 452/948 (47%), Positives = 594/948 (62%), Gaps = 46/948 (4%)

Query: 58  WPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLS 117
           W A ++RD FF +F  +NH    SSP +P  DPTLLFANAGMNQYK IFLGT DPN+  +
Sbjct: 10  WTAPRIRDAFFDYFRARNHSFVPSSPTIPYEDPTLLFANAGMNQYKSIFLGTVDPNSDHA 69

Query: 118 KLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTK 177
           KL RA N+QKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK EA+ ++WE+LT+
Sbjct: 70  KLRRAFNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAVGYSWEVLTE 129

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWL-KFLPASRVLPFGCKDNFWEMGDTGPC 236
           VY+LP DRLY TYF GD K GL PD EA+  WL + +    +LP   KDNFWEMG TGPC
Sbjct: 130 VYKLPKDRLYVTYFEGDPKTGLEPDLEAKQYWLDQGVDEDHILPGNAKDNFWEMGATGPC 189

Query: 237 GPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGF 296
           GPCSEIH+DR G R+AA LVN DDP  +EIWN V+IQFNRE DGSL+PLP+KHVDTGLGF
Sbjct: 190 GPCSEIHFDRIGGRNAAHLVNKDDPDVLEIWNNVYIQFNREEDGSLRPLPSKHVDTGLGF 249

Query: 297 ERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRT 356
           ERL SI+Q+K SNYDTDVF+P+F  IQ+ TG RPY GK G +D D +D AYRVVADH+RT
Sbjct: 250 ERLVSIIQDKHSNYDTDVFLPLFTRIQELTGVRPYQGKFGEEDTDGIDTAYRVVADHVRT 309

Query: 357 LSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFPE 415
           L+FA++DG  P N GR YVLRRILRR  R+  + L    G FF+ LV  V++ MG VFPE
Sbjct: 310 LTFALSDGGVPNNIGRGYVLRRILRRGSRFARKKLGVPIGSFFSSLVPTVIETMGAVFPE 369

Query: 416 LKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTYGFP 472
           + ++   I+EI+  EE SF +TL +G    +++ K A++   ++L G+D + L+DTYGFP
Sbjct: 370 ITKKYDEIKEILDEEEESFSRTLDRGEKLFDQYAKKAKEQGLQLLDGKDVWRLYDTYGFP 429

Query: 473 LDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR-GVL 531
           +DLT LMAEE GL ++ + F+ A   ++E S+    K     + +D    A L K   V 
Sbjct: 430 VDLTLLMAEEMGLGINQKEFDEAQAWSKEASKGPTKKGVSDMVKLDVHDIATLEKNPNVP 489

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESV--VPG-NEVGIVLASSSFYAEQGGQIFDE 588
            T+DS KF    +  + IKAI+    F+ S   +PG    G++L  +SFYAE GGQ +D 
Sbjct: 490 KTNDSAKF-GTGNITATIKAIFHNKAFVSSTENIPGYGTFGLLLDKTSFYAEAGGQEYDT 548

Query: 589 G--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
           G   I+G+   F V NVQ+Y G+V+H G L  G     VG EVI   D  RR  +  NHT
Sbjct: 549 GNIVIDGV-ADFEVTNVQVYKGYVLHTGYLKYGT--LEVGNEVISSYDELRRWPLRNNHT 605

Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD 706
            TH+LNF+LRE+LGDH+DQKGS+V P KLRFDFSH   +    L +I+ +  + I+  + 
Sbjct: 606 GTHILNFSLREILGDHIDQKGSLVAPSKLRFDFSHKSQISLSELAKIQEMCTDWIRRNVK 665

Query: 707 VFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGG 766
           V+ K+  L  A  I GLRAVFGE YPDPVRVV++   V+++  D EN +W   S E CGG
Sbjct: 666 VYGKDLDLQTAYKIPGLRAVFGESYPDPVRVVSLEYDVDEIAKDIENPKWRQTSIEFCGG 725

Query: 767 THLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLL 826
           TH++ T + +   ++ E GIAKGIRRI AVT   A+   + A +    +++  ++ G   
Sbjct: 726 THVARTGDIKDIVVVEESGIAKGIRRIVAVTGQEAHDVTQLADTFRDRLNNLERLSGKEK 785

Query: 827 EKNQ--------------VRKAQKKVAEENLQKAVKVATETAEAAA-------------S 859
           + N                RKA  K     ++KA     +  EAAA             S
Sbjct: 786 DANLKAFAVELGQAEISVTRKADLKERLAAIRKAFDKQVKEKEAAANKEAIDHVMKYFES 845

Query: 860 NGKP-FCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQS 918
           N K    I  V+V  +A  ++  V +   + G  V VFS D ++ K V        S + 
Sbjct: 846 NEKAEVFIGTVDVEGNAKILQNIVSQA-RKLGKAVYVFSLDPSSGK-VSHVNFISNSLKE 903

Query: 919 KQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEF 966
           K  +   W T   + L G+ G GK   A G G ++ ++  A+++A  +
Sbjct: 904 KGADARVWATKVSEILGGKAG-GKDDSAQGMGINSDRLEEALEVAQSY 950


>gi|194759416|ref|XP_001961945.1| GF14684 [Drosophila ananassae]
 gi|190615642|gb|EDV31166.1| GF14684 [Drosophila ananassae]
          Length = 966

 Score =  836 bits (2159), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 446/971 (45%), Positives = 594/971 (61%), Gaps = 70/971 (7%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A +VRD +  FF+++ H+   SS  +P++DPTLLFANAGMNQ+KPIFLGTADPN++++K 
Sbjct: 6   AKEVRDAYLDFFKEQKHIYVHSSSTIPLDDPTLLFANAGMNQFKPIFLGTADPNSEMAKW 65

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFGDYFK E   WAW+ LT+  
Sbjct: 66  VRVANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKEICSWAWQFLTERL 125

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            LP DRLY TYFGGD+ +GL PD E + +WL   L    +LP   KDNFWEMG+TGPCGP
Sbjct: 126 GLPKDRLYVTYFGGDKASGLEPDLECKQLWLDLGLKPEHILPGSMKDNFWEMGETGPCGP 185

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSE+H+DR G R    LVN DDP  +EIWN+VFIQFNRESDGSLKPLP KH+D G+GFER
Sbjct: 186 CSELHFDRIGGRSVPELVNMDDPDVLEIWNLVFIQFNRESDGSLKPLPKKHIDCGMGFER 245

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S++QNK SNYDTD+F+P+F+AIQ  TGA  Y G+VG DD D +DMAYRV+ADH RT++
Sbjct: 246 LVSVIQNKRSNYDTDLFVPLFEAIQAGTGAPAYQGRVGTDDVDGIDMAYRVLADHARTIT 305

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY +E L A+ GFF  LVN VV ++GD FPE+K+
Sbjct: 306 IALADGGTPDNTGRGYVLRRILRRAVRYATEKLNAKPGFFASLVNTVVDLLGDAFPEVKK 365

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK-VLSGQDAFILWDTYGFPLDLTQ 477
              HI +II  EE  F KTL +G     +  + +  +  + G  A+ L+DTYGFP+DLTQ
Sbjct: 366 DPQHIIDIINEEELQFLKTLTRGRNLLNRTIEKLGSQATIPGDVAWRLYDTYGFPVDLTQ 425

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA-----IVMDADATAALHKRGVLA 532
           LMAEE+ L +D+EG+  A      +  S    Q  GA     I +D  A + L ++GV  
Sbjct: 426 LMAEEKSLQIDMEGYEAA------KHNSYILSQGKGASKIEEINLDVHAISQLQEQGVAP 479

Query: 533 TDDSFKFIW------------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAE 580
           T+DSFK+ +            + +  S I A+   ++F+  +  G + GIVL  ++FYAE
Sbjct: 480 TNDSFKYKYEAVSDERDSAYNYGECTSKIVALRFENQFVNEITSGQKAGIVLDKTNFYAE 539

Query: 581 QGGQIFDEGFIEGL---FGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDR 637
            GGQI+D+G +  +      F V  V   GG+++HIG +    G   VG+E+   +D +R
Sbjct: 540 SGGQIYDQGALVKVNDEANEFLVDRVYNRGGYILHIGVV---EGTLKVGDELQLHIDVER 596

Query: 638 RKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIV 697
           R L   NH+ TH LN  L +VLG   +QKGS+V+PEKLRFDF+    +  E + + E++ 
Sbjct: 597 RWLTMKNHSATHALNHCLLQVLGKDTEQKGSLVVPEKLRFDFNSKGAMTIEQVAKTENLT 656

Query: 698 NEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWL 757
            E +   + +++KE+ LA AK I GLR+VF EVYPDPVRV++ G  V++L  +P+++   
Sbjct: 657 KEMVYNNVPIYAKESKLALAKKIRGLRSVFDEVYPDPVRVISFGVPVDELEQNPDSEAGE 716

Query: 758 SISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV-- 815
             S E CGGTHL  +     F + SEE IAKGIRRI A+T   A KA + + + E+E+  
Sbjct: 717 KTSVEFCGGTHLRRSGHIMDFVISSEEAIAKGIRRIVALTGPEALKALKKSEAFEQEIVK 776

Query: 816 ------------DDASKIEGSLLEKNQVRKAQ----KKVAEENLQKAVKVATETAEAA-- 857
                       D  S ++  +    Q+  A     KK    NL K +K   +  E A  
Sbjct: 777 LKATIDADTSGKDSKSHVKEIVELTEQISHATIPYVKKDEMRNLLKGLKKTLDDKERALR 836

Query: 858 -------ASNGKPFC---------ISRVEVGLDAAAVREAVLKVIEQ-KGMPVMVFSTDE 900
                      K  C         + ++E   +  A+  A+ +V  Q      M FS D 
Sbjct: 837 AAVSTTVVEKAKELCEKNPDAIVLVEQLEAFNNTKALDAALKQVRSQLPNAAAMFFSVDA 896

Query: 901 TTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAM 960
            + K    + VP KS   K L+ +EW+      L G+ G GK   A   GT+  +V   +
Sbjct: 897 DSKKIFCLSSVP-KSAVEKGLKANEWVQHVSATLGGKGG-GKPESAQASGTNYEKVDEIV 954

Query: 961 DLAAEFAAMKL 971
           +LA +FA  KL
Sbjct: 955 ELATKFAQTKL 965


>gi|313471806|sp|Q5AQL1.2|SYA_EMENI RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|259486703|tpe|CBF84773.1| TPA: alanyl-tRNA synthetase, putative (AFU_orthologue;
           AFUA_8G03880) [Aspergillus nidulans FGSC A4]
          Length = 961

 Score =  836 bits (2159), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 461/955 (48%), Positives = 610/955 (63%), Gaps = 54/955 (5%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           +W +  VRDTF ++F+ K H    SSPV P++DPTLLF NAGMNQ+K IFLGT +PN+  
Sbjct: 10  KWTSKLVRDTFLQYFQGKGHTFVASSPVAPLSDPTLLFTNAGMNQFKSIFLGTVNPNSDF 69

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
           ++L  A N+QKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK EAI+++WELLT
Sbjct: 70  AQLKSAVNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIQYSWELLT 129

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
           +VY L   RLY TYF G+++ GL PD EA+ +W    +P   +LP   KDNFWEMGD GP
Sbjct: 130 QVYGLDPGRLYVTYFEGNKEGGLQPDLEAKALWKAVGVPEDHILPGNMKDNFWEMGDQGP 189

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPCSEIHYDR G R+AASLVN DDP  +EIWN VFIQ+NRE+DGSL+ LP KHVDTG+G
Sbjct: 190 CGPCSEIHYDRIGGRNAASLVNQDDPNVLEIWNNVFIQYNRENDGSLRSLPNKHVDTGMG 249

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
           FERL S+LQ+K SNYDTDVF PIF  IQ  TGAR Y G+ G DD+D +D AYRVVADH+R
Sbjct: 250 FERLVSVLQDKSSNYDTDVFGPIFQTIQVITGAREYQGRFGTDDSDGIDTAYRVVADHVR 309

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFP 414
           TL FAI+DG  P NEGR YV+RR+LRR  RY  +    + G FF+ +V  VV+ +GD+FP
Sbjct: 310 TLMFAISDGVVPNNEGRGYVIRRVLRRGARYARKYFNVEIGSFFSKIVPTVVEQLGDMFP 369

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ---GKVLSGQDAFILWDTYGF 471
           ELKQ++  + EI+  EE SF KTL +G  +F++ AQ  +      L G D + L+DT+GF
Sbjct: 370 ELKQKQQDVIEILNEEEISFAKTLDRGERQFEQYAQQAKTAGDHKLHGADVWRLYDTFGF 429

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK-RGV 530
           P+DLT++MAEERGL +D   F  A  +A+E S+  Q K   G++ +D      L K  GV
Sbjct: 430 PVDLTRIMAEERGLEIDDRQFEEARHKAKEASK-GQKKTTTGSVKLDVHDLGKLEKMNGV 488

Query: 531 LATDDSFKFIWFQDHKSVIKAIYTGSEF---IESVVPGNEVGIVLASSSFYAEQGGQIFD 587
             TDDS KF    +  + IKAIY G  F    +++    ++GI+L  ++FYAEQGGQ  D
Sbjct: 489 PKTDDSAKF-EIGNVTAQIKAIYHGKTFHSSTQNLDDSEQIGIILDRTNFYAEQGGQEND 547

Query: 588 EG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            G   I+G      V +VQ Y G+V+H G +  G+  F V + VIC+ D  RR  I  NH
Sbjct: 548 TGRIVIDGQ-AELEVVDVQQYAGYVLHTGYMKYGS--FKVDDTVICEYDELRRWPIRNNH 604

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           T TH+LNFALR VLGD ++QKGS+V  EKLRFDFSH  PV    L +IE +  + I+   
Sbjct: 605 TGTHILNFALRGVLGDGIEQKGSLVSAEKLRFDFSHKSPVTDVELVKIEDLSTQYIRRNC 664

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            V+SKE  L+ A+ I G+RAVFGE YPDPVRVV++G +++++L + E+  W   S E CG
Sbjct: 665 LVYSKEVPLSIARNIAGVRAVFGETYPDPVRVVSVGAELDEILKNVEDPRWADFSIEFCG 724

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVD--------- 816
           GTH+  T + +   +L E GIAKGIRRI AVT   A++    A   EK ++         
Sbjct: 725 GTHVQKTGDIKDLVILEESGIAKGIRRIIAVTGEDAHEVQRLAEEFEKRLNHLEAMPSGS 784

Query: 817 ----DASKIEGSL-------LEKNQVR----KAQKKVAEEN-------LQKAVKVATETA 854
               +A +I+  L       ++K++ R    +  KK+ +E         +KAV+  T   
Sbjct: 785 AKEQNAKQIQVELNQLSISAVQKSRFRERFTQINKKIIDEQKAQQKLESKKAVESITSYF 844

Query: 855 EAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAG--VP 912
            A  +  K + I+++ +  +A AV E  L  ++ K    MV+    +     V  G  VP
Sbjct: 845 AAPENANKSWLIAKLPISANAKAVSEC-LTYVKTKLADKMVYVLASSLEDGRVAHGCYVP 903

Query: 913 EK-SDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEF 966
           +  SDQ      SEW ++A+    G    GKG  + G G +  +V  A+DLA+E+
Sbjct: 904 KAISDQGA--SASEW-SSAVSRAVGGKAGGKGPTSIGNGINPEKVDDAVDLASEY 955


>gi|327349463|gb|EGE78320.1| alanyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188]
          Length = 1088

 Score =  835 bits (2158), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 466/1008 (46%), Positives = 626/1008 (62%), Gaps = 62/1008 (6%)

Query: 6    RKTETASFVATARVLLNPSLTLAVTNHHHSLISRFSASAVAAMPGADPQVVE---WPATK 62
            R+  + +   ++    +P  TL    HHH L       A +A   A  Q VE   W A +
Sbjct: 73   RRFPSPAICNSSTSTPSPVATLPARFHHHGL-------AHSAFKMASAQTVEQPEWSALR 125

Query: 63   VRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRA 122
            VR+ F  FF++  H    SS VVP++DPTLLF NAGMNQYK IFLGT DPN+  + L RA
Sbjct: 126  VRNAFLDFFKENGHTFVPSSSVVPLSDPTLLFTNAGMNQYKSIFLGTVDPNSDFATLKRA 185

Query: 123  CNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLP 182
             N+QKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK EAI ++W+LLTKVY L 
Sbjct: 186  HNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAISYSWDLLTKVYGLE 245

Query: 183  ADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGPCSE 241
             DRLY TYF G+  AG+ PD EA+++WL   +    +L    KDNFWEMG+ GPCGPCSE
Sbjct: 246  PDRLYVTYFEGNPDAGIGPDLEAKELWLSVGVAEDHLLSGNMKDNFWEMGEQGPCGPCSE 305

Query: 242  IHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTS 301
            IHYDR G R+AA LVN DDP  +EIWN VFIQ+NRE D SL+PLP +H+DTG+G+ERL S
Sbjct: 306  IHYDRIGGRNAAHLVNQDDPNVLEIWNNVFIQYNREPDRSLRPLPNRHIDTGMGYERLVS 365

Query: 302  ILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAI 361
            ILQNK SNYDTDVF P+FD I++ TG RPY+GK G +D D +D AYRVVADHIRTL+FAI
Sbjct: 366  ILQNKSSNYDTDVFTPLFDKIREITGCRPYTGKFGEEDTDGIDTAYRVVADHIRTLTFAI 425

Query: 362  ADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFPELKQRE 420
            +DG+ P NEGR YV+RR+LRR  RY  + L  + G FF+ +V  +V+ MGD+FPE+++++
Sbjct: 426  SDGASPNNEGRGYVVRRVLRRGARYARKYLNVEIGSFFSKIVPTLVEQMGDMFPEIRRKQ 485

Query: 421  AHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK---VLSGQDAFILWDTYGFPLDLTQ 477
              + EI+  EE SF KTL +G   F++ A   + K    L G D + L+DT+GFP+DLTQ
Sbjct: 486  TDVMEILDEEEISFAKTLDRGERLFEEYALQAKQKGLGNLHGADVWRLYDTFGFPVDLTQ 545

Query: 478  LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK-RGVLATDDS 536
            LMAEERGL +D   F  A  +A+E S+  Q KQ    + +       L     V  T+D 
Sbjct: 546  LMAEERGLTIDNAEFEEARLKAKEASK-GQGKQTADVVKLTVHDLGLLETMNNVPKTNDD 604

Query: 537  FKFIWFQDHKSVIKAIYTGSEFIESV--VP-GNEVGIVLASSSFYAEQGGQIFDEG--FI 591
             KF    +  S IKAIY   +F++S   +P G + GI+L  ++FYAEQGGQ  D G   I
Sbjct: 605  AKF-GRGNITSQIKAIYHNKKFVDSTKDIPEGEQFGIILDRTNFYAEQGGQENDTGKIII 663

Query: 592  EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHML 651
            +G      V +VQ+YGG+++H G +  G+  F+V + VI + D  RR  I  NHT TH+L
Sbjct: 664  DGK-AELAVEDVQVYGGYILHTGFMKYGS--FNVNDSVIAEYDELRRWPIRNNHTGTHIL 720

Query: 652  NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKE 711
            NFALR+VLG+ V+QKGS+V  EKLRFDFSH   V    L +IE I  + I+    V++K+
Sbjct: 721  NFALRQVLGEGVEQKGSLVAAEKLRFDFSHKSAVSDSDLEKIERISTDYIRQNCAVYAKD 780

Query: 712  ATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSN 771
              L+ A+ I+G+RAVFGE YPDPVRVV++G ++E++L +  +  W  IS E CGGTH+  
Sbjct: 781  VPLSTAREISGVRAVFGETYPDPVRVVSVGVELEEILQNVHDPRWKDISIEFCGGTHVQK 840

Query: 772  TREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSL--------------EKEVD- 816
            T + +   +L E GIAKGIRRI AVT   A++    A                 +KE++ 
Sbjct: 841  TGDIKDLVILEENGIAKGIRRIIAVTGEEAHEVQRIAKEFGERLQRFDKMELGPQKEMEA 900

Query: 817  -----DASKIEGSLLEKNQVR----KAQKKVAE-----ENLQ--KAVKVATETAEAAASN 860
                 D +++  S +EK + R    +  KKV E     + L+  KA+   T   E   + 
Sbjct: 901  KLLQVDLNQLTISAVEKVRFRERFTQIHKKVVEGQKAAQKLESKKALDAITGYFETPENK 960

Query: 861  GKPFCISRVEVGLDAAAVREAVLKVIEQK--GMPVMVFSTDETTNKAVVCAGVPEKSDQS 918
              P  + ++ +  +  AV ++ L  ++ K     V VF+ D+   K V    V + S  +
Sbjct: 961  DAPHLVLQLPISANPKAVSDS-LNFVKTKMHNKSVYVFAADKGAGKVVHGCHVAQ-SLSA 1018

Query: 919  KQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEF 966
            +    +EW       + GR G GK  +A G GT+A ++  A+  A E+
Sbjct: 1019 QGATPNEWANTVSSIVGGRAG-GKAPVAIGNGTEAEKLEDAIKAATEY 1065


>gi|431912458|gb|ELK14592.1| Alanyl-tRNA synthetase, cytoplasmic [Pteropus alecto]
          Length = 1118

 Score =  835 bits (2156), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 454/988 (45%), Positives = 601/988 (60%), Gaps = 89/988 (9%)

Query: 60   ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
            A+++R  F  FF+   H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  ++KL
Sbjct: 139  ASEIRQRFIDFFKRNEHTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKL 198

Query: 120  TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            +RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A + A ELLT+ +
Sbjct: 199  SRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQEF 258

Query: 180  RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
             +P              AGL PD E + IW    L  +++LP   KDNFWEMGDTGPCGP
Sbjct: 259  GIPLXXXXXXXXA----AGLEPDLECKQIWQDLGLDDTKILPGNMKDNFWEMGDTGPCGP 314

Query: 239  CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
            CSEIHYDR G RDAA LVN DDP  +EIWN+VFIQ+NRE+DG LKPLP K +DTG+G ER
Sbjct: 315  CSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNRETDGILKPLPKKSIDTGMGLER 374

Query: 299  LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
            L S+LQNKMSNYDTD+F+P F+AIQ+ TGARPY+GKVGA+DAD +DMAYRV+ADH RT++
Sbjct: 375  LVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADHARTIT 434

Query: 359  FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
             A+ADG  P N GR YVLRRILRRAVRY  E L A  GFF  LV++VV+ +GD FPELK+
Sbjct: 435  VALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASKGFFATLVDVVVQSLGDAFPELKK 494

Query: 419  REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
                +++II  EE  F KTL +G     +  Q +   K + G  A++L+DTYGFP+DLT 
Sbjct: 495  DPDMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTG 554

Query: 478  LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
            L+AEE+GLLVD++GF      A+ +S   Q K AGG   I++D  A   L ++ + ATDD
Sbjct: 555  LIAEEKGLLVDMDGFEEERKMAQLKS---QGKGAGGEDHIMLDIYAIEELREKSLEATDD 611

Query: 536  SFKFIWFQDHK---------SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
            S K+ +  D           + + A+     FIE V  G E G+VL  + FYAEQGGQI+
Sbjct: 612  SPKYNYHSDSSGSYAFESAVATVMALRRDKTFIEEVSTGQECGVVLDKTCFYAEQGGQIY 671

Query: 587  DEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
            DEG++  +  S      F V+N Q+ GG+V+HIG++    G   VG++V   +D  RR+ 
Sbjct: 672  DEGYLVKVDDSSEDKTEFTVKNTQVRGGYVLHIGTIY---GSLKVGDQVRLFIDEPRRRP 728

Query: 641  IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
            +  NHT TH+LNFALR VLG+  DQ+GS+V P++LRFDF+    +  + ++ +E I NE 
Sbjct: 729  VMSNHTATHILNFALRSVLGE-ADQRGSLVAPDRLRFDFTAKGAMSTQQIKEVEEIANEM 787

Query: 701  IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
            I+A   V++++  LA AK I GLRAVF E YPDPVRVV+IG  V +LL DP        S
Sbjct: 788  IEAAKPVYTQDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTS 847

Query: 761  AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDA-S 819
             E CGGTHL N+  A AF ++SEE IAKGIRRI AVT   A KA   A SL+K +    +
Sbjct: 848  VEFCGGTHLQNSSHAGAFVIVSEEAIAKGIRRIVAVTGAEAQKALRKAESLKKSLSVMEA 907

Query: 820  KIEGSLLEKNQVRKA----------------QKKVAEENLQKAVKVATETAEAAASN--- 860
            K++   +    V++                 QK    ENL+   K+  +   A+ ++   
Sbjct: 908  KVKAQTVPNKDVQREIADLGEALASAVIPQWQKDEFRENLKSLKKIMDDLDRASKADVQK 967

Query: 861  --------------GKPFCISRVEVGLDAAAVR---------------------EAVLKV 885
                           +P  I  +E G  A A++                        LK+
Sbjct: 968  RVLEKTKQLIDSNPNQPLVILEMESGASAKAIQGLGFQALLCACLLRIRFLLALNEALKL 1027

Query: 886  IEQKG--MPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKG 943
             +        M+F+ D    K + C     ++  ++ L+ SEW+      + G+ G GK 
Sbjct: 1028 FKTHSPQTSAMLFTVDNEAGK-ITCLCQVSQNAANQGLKASEWVQQVSGLMDGK-GGGKD 1085

Query: 944  GLASGQGTDAAQVTPAMDLAAEFAAMKL 971
              A   G + + +  A+ LA  FA ++L
Sbjct: 1086 VSAQATGKNVSCLQEALQLATSFAQLRL 1113


>gi|242798694|ref|XP_002483222.1| alanyl-tRNA synthetase, putative [Talaromyces stipitatus ATCC
           10500]
 gi|218716567|gb|EED15988.1| alanyl-tRNA synthetase, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 1002

 Score =  835 bits (2156), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 468/995 (47%), Positives = 614/995 (61%), Gaps = 53/995 (5%)

Query: 14  VATARVLLNPSLTLAVTNHHHSLISRFSASAVAAMPGADPQVVEWPATKVRDTFFKFFED 73
           V   R L  P  +   +N  +     FS      M  +  +  +W A +VR  F  +F++
Sbjct: 13  VLLPRALRFPHFSATASNPRY-----FSRHFAKNMASSQEKSSQWTAERVRSEFIDYFKE 67

Query: 74  KNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGG 133
           + H    SS VVP  DPTLLFANAGMNQYK IFLGT DP +  + L RA N+QKCIRAGG
Sbjct: 68  RGHTFVPSSSVVPHADPTLLFANAGMNQYKSIFLGTVDPQSDFAHLKRAVNSQKCIRAGG 127

Query: 134 KHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGG 193
           KHNDLDDVGKD YHHTFFEMLGNWSFGDYFK EAI ++WELLTKV+ L   RLY TYF G
Sbjct: 128 KHNDLDDVGKDNYHHTFFEMLGNWSFGDYFKKEAITYSWELLTKVFGLDPSRLYVTYFEG 187

Query: 194 DEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDA 252
           +E  GL PD EA++IW    +P   +LP   KDNFWEMGD GPCGPCSEIHYDR G R+A
Sbjct: 188 NESGGLEPDLEAKEIWRNVGVPEDHILPGNMKDNFWEMGDQGPCGPCSEIHYDRIGGRNA 247

Query: 253 ASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDT 312
           ASLVN DDP  +EIWN VFIQ+NRE+D SL+PLP KHVDTG+GFERL S+LQ+K SNYDT
Sbjct: 248 ASLVNQDDPNVLEIWNNVFIQYNREADRSLRPLPNKHVDTGMGFERLVSVLQDKSSNYDT 307

Query: 313 DVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGR 372
           DVFMP+F  IQ+ TGA  Y G+ GA+DAD VD AYRVVADH+RTL+FAI+DG+ P NEGR
Sbjct: 308 DVFMPLFRTIQEITGAPEYQGRFGAEDADGVDTAYRVVADHVRTLTFAISDGAYPNNEGR 367

Query: 373 EYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEE 431
            YV+RR+LRR  RY  +    + G FF+ +V  +V+ MG +FPE+K+++A + E++  EE
Sbjct: 368 GYVIRRVLRRGARYARKYFNVEIGSFFSKIVPTLVEQMGVMFPEIKEKQAEVMEVLNEEE 427

Query: 432 ASFGKTLLKGIEKFKKAAQDVQGKVLS---GQDAFILWDTYGFPLDLTQLMAEERGLLVD 488
            SF KTL +G ++F+  AQ  + K L+   G D + L+DT+GFP+DLTQ+MAEERGL +D
Sbjct: 428 VSFSKTLDRGEKQFENYAQQAKSKGLNKLHGADVWRLYDTFGFPVDLTQIMAEERGLSID 487

Query: 489 IEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAAL-HKRGVLATDDSFKFIWFQDHKS 547
              F  A  +A+E S+  Q K A   + +D      L +   V  TDDS KF   +  +S
Sbjct: 488 EAEFEEARLKAKEASK-GQKKAAAETVKLDVHDLGKLDNMSDVPKTDDSSKFDSPR-IES 545

Query: 548 VIKAIYTGSEFIESV--VP-GNEVGIVLASSSFYAEQGGQIFDEGF--IEGLFGSFYVRN 602
           ++KAIY    FI+S   VP G ++G++L  ++FYAEQGGQ  D G   I+G      V +
Sbjct: 546 IVKAIYYSKNFIQSTADVPEGEQIGVILDRTNFYAEQGGQENDTGIISIDGK-AELEVGD 604

Query: 603 VQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDH 662
           VQ YGG+V+H G +  G+   +VG+ V+C+ D  RR+ I  NHT TH+LNFALRE+LGD 
Sbjct: 605 VQSYGGYVLHTGFIKYGS--LAVGDSVMCEFDDRRRQPIRNNHTGTHILNFALREILGDG 662

Query: 663 VDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCING 722
           ++QKGS+V  EKLRFDFSH   V  + L +IE    E I+    V+SKE  LA A+ I G
Sbjct: 663 INQKGSLVAAEKLRFDFSHKAAVSDKELDQIERKSTEYIRQNCGVYSKEVPLATAREITG 722

Query: 723 LRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLS 782
           +RAVFGE YPDPVRVV++G +VE++L D ++  W  IS E CGGTH+S + E     +L 
Sbjct: 723 VRAVFGETYPDPVRVVSVGVEVEEILKDVKDPRWNDISIEFCGGTHVSRSGEIRELVILE 782

Query: 783 EEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGS----------LLEKNQ-- 830
           E GIAKGIRRI AVT   A +A   A   EK ++    +E             LE NQ  
Sbjct: 783 ESGIAKGIRRIIAVTGDEALQAQLTAVEFEKRLEKLRTLEHGPAKEMEMKQVQLELNQLA 842

Query: 831 ---VRKA----------------QKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEV 871
              V+KA                QK + +  L+KA  +      A  +  +   ++++  
Sbjct: 843 ISAVQKAKFRDLFARINKQVLDDQKALQKVELKKAQDLIKAYFGAEENKDRTTFVTKLPA 902

Query: 872 GLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAAL 931
             +A  V E++  +  +     + F   + +   V       K+     L  SEW     
Sbjct: 903 TSNAKVVSESINFIKSKMADKTVYFIAPDPSGNKVAHGCHVAKAASELGLSPSEWANVVS 962

Query: 932 QPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEF 966
             + G+ G G+   A G GT+  +V   + LA E+
Sbjct: 963 GAVGGKAG-GRAPTAIGNGTNVDKVDEGVALATEY 996


>gi|194863135|ref|XP_001970293.1| GG23450 [Drosophila erecta]
 gi|190662160|gb|EDV59352.1| GG23450 [Drosophila erecta]
          Length = 966

 Score =  833 bits (2153), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 445/970 (45%), Positives = 592/970 (61%), Gaps = 68/970 (7%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A +VR+ +  FF+++ H+   SS  +P++DPTLLFANAGMNQ+KPIFLGTADPN+++SK 
Sbjct: 6   AKEVRNAYLDFFKEQKHIYVHSSSTIPLDDPTLLFANAGMNQFKPIFLGTADPNSEMSKW 65

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFGDYFK E   WAWE LTK  
Sbjct: 66  VRVANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKEICSWAWEFLTKRL 125

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            LP DRLY TYFGGDE +GL PD E + +WL   L    +LP   KDNFWEMG+TGPCGP
Sbjct: 126 ALPKDRLYVTYFGGDEASGLEPDLECKQMWLDLGLKPEHILPGSMKDNFWEMGETGPCGP 185

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSE+H+DR G R    LVN DDP  +EIWN+VFIQ+NRESDGSLK LP KH+D G+GFER
Sbjct: 186 CSELHFDRIGGRSVPELVNMDDPDVLEIWNLVFIQYNRESDGSLKQLPKKHIDCGMGFER 245

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S++QNK SNYDTD+F+P+FDAIQ  TGA  Y G+VG DD D +DMAYRV+ADH RT++
Sbjct: 246 LVSVIQNKRSNYDTDLFVPLFDAIQAGTGAPAYQGRVGPDDVDGIDMAYRVLADHARTIT 305

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY +E L A+ GFF  LVN VV+++GD FPE+K+
Sbjct: 306 IALADGGTPDNTGRGYVLRRILRRAVRYATEKLNAKPGFFATLVNTVVELLGDAFPEVKK 365

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK-VLSGQDAFILWDTYGFPLDLTQ 477
              HI +II  EE  F KTL +G     +  + +  +  + G  A+ L+DTYGFP+DLTQ
Sbjct: 366 DPQHIIDIINEEELQFLKTLTRGRNLLNRTIEKLGNQTTIPGDVAWRLYDTYGFPVDLTQ 425

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA-----IVMDADATAALHKRGVLA 532
           LMAEE+ L +D++G+  A      +  S    Q  GA     I +D  A + L ++GV  
Sbjct: 426 LMAEEKSLKIDMDGYEAA------KHNSYVLSQGKGASKIEEINLDVHAISQLQEQGVPP 479

Query: 533 TDDSFKFIW--FQDHK----------SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAE 580
           T+D+FK+ +    D +          S I A+   ++F+  +  G + GIVL  ++FYAE
Sbjct: 480 TNDTFKYKYEAVSDERDSAYNYGVCNSKIVALRFENQFVNEITSGQKAGIVLDKTNFYAE 539

Query: 581 QGGQIFDEGFIEGL---FGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDR 637
            GGQI+D+G +  +      F V  V   GG+++HIG +    G   VG+E+   +D +R
Sbjct: 540 SGGQIYDQGALVKVNDEANEFLVDRVYNRGGYILHIGIV---EGTLKVGDELELHIDVER 596

Query: 638 RKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIV 697
           R L   NH+ TH LN  L +VLG   DQKGS+V+PEKLRFDF+    +  E + + E + 
Sbjct: 597 RWLTMKNHSATHALNHCLLQVLGKDTDQKGSLVVPEKLRFDFNSKAAMTIEQVAKTEQLT 656

Query: 698 NEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWL 757
            E +   + +++KE+ LA AK I GLR+VF EVYPDPVRV++ G  V+DL  +P+++   
Sbjct: 657 KEMVYKNVPIYAKESKLALAKKIRGLRSVFDEVYPDPVRVISFGVSVDDLEQNPDSEAGE 716

Query: 758 SISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV-- 815
             S E CGGTHL  +     F + SEE IAKGIRRI A+T   A KA + + + E+E+  
Sbjct: 717 QTSVEFCGGTHLRRSGHIMDFVISSEEAIAKGIRRIVALTGPEALKALKKSEAFEQEIVR 776

Query: 816 ------------DDASKIEGSLLEKNQVRKAQ----KKVAEENLQKAVKVATETAEAA-- 857
                       D  S ++  +    Q+  A     KK    NL K +K   +  E A  
Sbjct: 777 LKATIDTDKSGKDSKSHVKEIVELTEQISHATIPYVKKDEMRNLLKGLKKTLDDKERALR 836

Query: 858 -------ASNGKPFC---------ISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDET 901
                      K  C         + ++E   +  A+  A+ +V  Q      +F + + 
Sbjct: 837 AAVSVTVVERAKALCEANPNATVLVEQLEAFNNTKALDAALKQVRSQLPDAAAMFLSVDA 896

Query: 902 TNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMD 961
            +K + C     KS   K L+ +EW+      L G+ G GK   A   GT+  +V   + 
Sbjct: 897 DSKKIFCLSSVPKSAVEKGLKANEWVQHVSATLGGKGG-GKPESAQASGTNFEKVDEIVQ 955

Query: 962 LAAEFAAMKL 971
           LA++FA  KL
Sbjct: 956 LASKFAQSKL 965


>gi|195339200|ref|XP_002036208.1| GM12994 [Drosophila sechellia]
 gi|194130088|gb|EDW52131.1| GM12994 [Drosophila sechellia]
          Length = 966

 Score =  833 bits (2151), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 443/970 (45%), Positives = 592/970 (61%), Gaps = 68/970 (7%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A +VR+ +  FF+++ H+   SS  +P++DPTLLFANAGMNQ+KPIFLGTADPN+++SK 
Sbjct: 6   AKEVRNAYMDFFKEQKHIYVHSSSTIPLDDPTLLFANAGMNQFKPIFLGTADPNSEMSKW 65

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFGDYFK E   WAWE LT+  
Sbjct: 66  VRVANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKEICSWAWEFLTQRL 125

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            LP DRLY TYFGGD  +GL PD E + +WL   L    +LP   KDNFWEMG+TGPCGP
Sbjct: 126 ALPKDRLYVTYFGGDAASGLEPDLECKQMWLDLGLKPEHILPGSMKDNFWEMGETGPCGP 185

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSE+H+DR G R    LVN DDP  +EIWN+VFIQ+NRESDGSLK LP KH+D G+GFER
Sbjct: 186 CSELHFDRIGGRSVPELVNMDDPDVLEIWNLVFIQYNRESDGSLKQLPKKHIDCGMGFER 245

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S++QNK SNYDTD+F+P+FDAIQ  TGA PY G+VGADD D +DMAYRV+ADH RT++
Sbjct: 246 LVSVIQNKRSNYDTDLFVPLFDAIQAGTGAPPYQGRVGADDVDGIDMAYRVLADHARTIT 305

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY +E L A+ GFF  LVN VV ++GD FPE+K+
Sbjct: 306 IALADGGTPDNTGRGYVLRRILRRAVRYATEKLNAKPGFFATLVNTVVDLLGDAFPEVKK 365

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK-VLSGQDAFILWDTYGFPLDLTQ 477
              HI +II  EE  F KTL +G     +  + +  +  + G  A+ L+DTYGFP+DLTQ
Sbjct: 366 DPQHIIDIINEEELQFLKTLTRGRNLLNRTIEKLGNQTTIPGDVAWRLYDTYGFPVDLTQ 425

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA-----IVMDADATAALHKRGVLA 532
           LMAEE+ L +D++G+  A      +  S    Q  GA     I +D  A + L ++GV  
Sbjct: 426 LMAEEKSLKIDMDGYEAA------KHNSYVLSQGKGASKIEEINLDVHAISQLQEQGVPP 479

Query: 533 TDDSFKFIW--FQDHK----------SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAE 580
           T+D+FK+ +    D +          S I A+   ++F+  +  G + GIVL  ++FYAE
Sbjct: 480 TNDTFKYKYEAVSDERDSAYNYGVCSSKIVALRFENQFVNEITSGQKAGIVLDKTNFYAE 539

Query: 581 QGGQIFDEGFIEGL---FGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDR 637
            GGQI+D+G +  +      F V  V   GG+++HIG +    G   VG+E+   +D +R
Sbjct: 540 SGGQIYDQGALVKVNDEANEFLVDRVYNRGGYILHIGVV---EGTLKVGDELELHIDVER 596

Query: 638 RKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIV 697
           R L   NH+ TH LN  L +VLG   +QKGS+V+PEKLRFDF+    +  E + + E + 
Sbjct: 597 RWLTMKNHSATHALNHCLLQVLGKDTEQKGSLVVPEKLRFDFNSKAAMTIEQVSKTEQLT 656

Query: 698 NEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWL 757
            E +   + +++KE+ LA AK I GLR+VF EVYPDPVRV++ G  V++L  +P+++   
Sbjct: 657 KEMVYKNVPIYAKESKLALAKKIRGLRSVFDEVYPDPVRVISFGVSVDELEQNPDSEAGE 716

Query: 758 SISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV-- 815
             S E CGGTHL  +     F + SEE IAKGIRRI A+T   A KA + + + E+E+  
Sbjct: 717 QTSVEFCGGTHLRRSGHIMDFVISSEEAIAKGIRRIVALTGPEALKALQKSETFEQEIVR 776

Query: 816 ------------DDASKIEGSLLEKNQVRKAQ----KKVAEENLQKAVKVATETAEAA-- 857
                       D  S ++  +    Q+  A     KK    NL K +K   +  E A  
Sbjct: 777 LKATIENDKSGKDSKSHVKEIVELTEQISHATIPYVKKDEMRNLLKGLKKTLDDKERALR 836

Query: 858 -------ASNGKPFC---------ISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDET 901
                      K  C         + ++E   +  A+  A+ +V  Q      +F + + 
Sbjct: 837 AAVSVTVVERAKALCEANPNATVLVEQLEAFNNTKALDAALKQVRSQLPDAAAMFLSVDA 896

Query: 902 TNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMD 961
            +K + C     KS   K L+ +EW+      L G+ G GK   A   GT+  +V   + 
Sbjct: 897 DSKKIFCLSSVPKSAVEKGLKANEWVQHVSATLGGKGG-GKPESAQASGTNYEKVDEIVQ 955

Query: 962 LAAEFAAMKL 971
           LA++FA  KL
Sbjct: 956 LASKFAQSKL 965


>gi|403169458|ref|XP_003328904.2| alanyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|375167967|gb|EFP84485.2| alanyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 1012

 Score =  832 bits (2150), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 429/776 (55%), Positives = 528/776 (68%), Gaps = 16/776 (2%)

Query: 54  QVVEWPATKVRDTFFKFFEDKN-HVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADP 112
           Q  +WPA KVR TFF++F++++ H    SS VVP +DPTLLFANAGMNQYKPIFLGT DP
Sbjct: 52  QFGDWPAHKVRKTFFEYFQNQHAHTFVHSSSVVPFDDPTLLFANAGMNQYKPIFLGTIDP 111

Query: 113 NTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAW 172
           +     L RA N+QKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK+EAI  AW
Sbjct: 112 SHPFKNLKRAVNSQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKSEAIHMAW 171

Query: 173 ELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMG 231
           +LLT+VY LP DRLY TYF GD    L PD E++ IW+   +   +VLP   KDNFWEMG
Sbjct: 172 DLLTRVYALPKDRLYVTYFQGDPAQNLLPDLESKQIWIDLGVHPDKVLPGNAKDNFWEMG 231

Query: 232 DTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVD 291
            +GPCGPCSEIHYDR G R+AA LVN DDP  +EIWN VFIQ+NRE  GSLKPLPA+HVD
Sbjct: 232 TSGPCGPCSEIHYDRVGGRNAAELVNQDDPMVLEIWNNVFIQYNREPSGSLKPLPARHVD 291

Query: 292 TGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVA 351
           TG+GFERL S+LQ+K SNYDTDVF P+FD IQ+ TGARPY+GK+G DD D +D AYRV+A
Sbjct: 292 TGMGFERLVSVLQDKTSNYDTDVFKPLFDRIQELTGARPYAGKLGEDDVDGIDTAYRVIA 351

Query: 352 DHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMG 410
           DH+RTL+FAI+DG  P N GR YVLRRILRR  RY  +      G FF+ L   ++  MG
Sbjct: 352 DHVRTLTFAISDGGVPNNVGRGYVLRRILRRGARYVRKKFDVPIGNFFSRLAPTLIDQMG 411

Query: 411 DVFPELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWD 467
           DVFPE++ +   ++EI+  EEASF  TL +G    EK+ + A+    K L GQD + L+D
Sbjct: 412 DVFPEIRSKTEELKEILDEEEASFALTLDRGEKMFEKYAEKAKKEGKKNLDGQDVWRLYD 471

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
           TYGFP+DLT LMAEE  L +D +GF  A   ++E S+  + K  G A+ +D  A A L  
Sbjct: 472 TYGFPVDLTLLMAEEARLGIDHDGFEMAQAASKELSKGGKKKVVGTAVELDVHAIAELES 531

Query: 528 RG-VLATDDSFKFIWFQDHKSVIKAIYTGSEF---IESVVPGNEVGIVLASSSFYAEQGG 583
              V  TDDS KF       + +KAIY   +F    E+V   +  GI+L  ++FYAEQGG
Sbjct: 532 NDKVPKTDDSSKFA-SSSITATVKAIYYDGKFHSSTEAVPSSSRCGIILDKTNFYAEQGG 590

Query: 584 QIFDEGFIEG--LFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLI 641
           Q  D G +       +F V +VQ+Y G+V+H G ++EG     VG+ V    D  RR  I
Sbjct: 591 QENDTGSLTNPEKQTTFDVEDVQVYNGYVLHSGLVSEGV--LQVGDSVSAAYDELRRWPI 648

Query: 642 APNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQI 701
             NHT TH+LN+ALRE LGDH+DQKGS+V P KLRFDFSH + V  + L +IES  N+ I
Sbjct: 649 RNNHTGTHVLNWALRETLGDHIDQKGSLVAPSKLRFDFSHKQQVTIDELSKIESTCNQWI 708

Query: 702 KAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLL-ADPENKEWLSIS 760
                V ++E  L EAK I GLRAVFGE YPDPVRVV +G    DLL AD  + +W + S
Sbjct: 709 SKSFPVAAREMRLDEAKKIPGLRAVFGEAYPDPVRVVVVGPNPFDLLDADLTDPKWSNYS 768

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVD 816
            E CGGTH+  T E +   L+ E GIAKG+RRI AVT   A    + A  +E ++D
Sbjct: 769 VEFCGGTHVKLTSEIKQLVLVEESGIAKGVRRIVAVTGEEARSVSQQAKDIEAKLD 824


>gi|195033960|ref|XP_001988798.1| GH11356 [Drosophila grimshawi]
 gi|193904798|gb|EDW03665.1| GH11356 [Drosophila grimshawi]
          Length = 967

 Score =  832 bits (2150), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 444/976 (45%), Positives = 592/976 (60%), Gaps = 79/976 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A +VR+ +  FF+++ H+   SS  +P++DPTLLF NAGMNQ+KPIFLGTADPN+++SK 
Sbjct: 6   AKEVRNAYLDFFKEQKHIYVHSSSTIPLDDPTLLFTNAGMNQFKPIFLGTADPNSEMSKW 65

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFGDYFK E   WAWE LT+  
Sbjct: 66  VRTVNTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKEICSWAWEFLTERL 125

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
           RLP DRLY TYFGGD  +GL PD E +  W+   L    +LP   KDNFWEMG+TGPCGP
Sbjct: 126 RLPKDRLYVTYFGGDAASGLQPDLECKQFWMDLGLKPEHILPGSMKDNFWEMGETGPCGP 185

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSE+H+DR G R    LVN DDP  +EIWN+VFIQFNRESDGSLKPLP KH+D G+GFER
Sbjct: 186 CSELHFDRIGGRSVPELVNQDDPDVLEIWNLVFIQFNRESDGSLKPLPKKHIDCGMGFER 245

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S++QNK SNYDTD+F+P+FDAIQ  TGA  Y G+VGADD D +DMAYRV+ADH RT++
Sbjct: 246 LVSVIQNKRSNYDTDLFVPLFDAIQAGTGAPAYQGRVGADDVDGIDMAYRVLADHARTIT 305

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY +E L A+ GFF  LV+ VV ++GD FPE+K+
Sbjct: 306 IALADGGNPDNTGRGYVLRRILRRAVRYATEKLNAKPGFFASLVSTVVDLLGDAFPEVKK 365

Query: 419 REAHIREIIAAEEASFGKTLLKG-------IEKFKKAAQDVQGKVLSGQDAFILWDTYGF 471
              HI +II  EE  F KTL +G       IEK   +   + G V     A+ L+DTYGF
Sbjct: 366 DPQHIMDIINEEELQFLKTLTRGRNLLNRTIEKLGTSQTTIPGDV-----AWRLYDTYGF 420

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA-----IVMDADATAALH 526
           P+DLTQLMAEE+ L +D+ G+  A      +  S    Q  GA     I +D  A + L 
Sbjct: 421 PVDLTQLMAEEKSLQIDMAGYEAA------KQNSYILSQGKGASKIDEITLDVHAISELQ 474

Query: 527 KRGVLATDDSFKFIW------------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLAS 574
           ++G+ +TDDSFK+ +            F +  S I A+   ++F++ +  G + GIVL  
Sbjct: 475 EKGLPSTDDSFKYNYEAVSVERDAAYNFSECTSKIVALRFENKFVQEISSGQKAGIVLDK 534

Query: 575 SSFYAEQGGQIFDEGFIEGL---FGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVIC 631
           ++FYAE GGQI+D+G +  L      F V  V   GG+++HIG +    G  +VG+E+  
Sbjct: 535 TNFYAESGGQIYDQGVLVKLNDEANEFLVDRVYNRGGYILHIGVVE---GNLAVGDELQL 591

Query: 632 KVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLR 691
            +D +RR L   NH+ TH LN  L +VLG   +QKGS+V+PEKLRFDF+    +  + + 
Sbjct: 592 HIDVERRWLTMKNHSATHALNHCLLQVLGKDTEQKGSLVVPEKLRFDFNCKAAMTIDQVA 651

Query: 692 RIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADP 751
           R E +  + +   + +++KE+ LA AK I GLR+VF EVYPDPVRV++ G  V+ L + P
Sbjct: 652 RTEKLTRDMVYQNMPIYAKESQLALAKRIRGLRSVFDEVYPDPVRVISFGVPVDRLESQP 711

Query: 752 ENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSL 811
           + +     S E CGGTHL N+     F + SEE IAKGIRRI A+T   A KA + + + 
Sbjct: 712 DAETGEQTSVEFCGGTHLRNSGHIMDFVISSEEAIAKGIRRIVALTGPEALKAIKKSEAF 771

Query: 812 EKEVD--------DASKIEGSL-------------------LEKNQVRK------AQKKV 838
           E+E+         D S  E  +                   ++K+++R            
Sbjct: 772 EQEISQLQATIEADQSGKESKMYVKLIVELTEQISHATIPHVKKDEMRNLLKLLKKSLDD 831

Query: 839 AEENLQKAVKVATETAEAAASNGKP---FCISRVEVGLDAAAVREAVLKVIEQKGMPVMV 895
            E  L+ AV V       A    +P     + ++E   +  A+  A+ +V  Q      +
Sbjct: 832 KERALRAAVSVTVVERTKALCEAEPQAKVLVHQLEAYNNTKALDAALKQVRLQLPEAAAM 891

Query: 896 FSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQ 955
           F + +  +K + C     K+   K L+ +EW+      L G+ G GK   A   G++  +
Sbjct: 892 FVSVDADSKKIFCLCSVPKAAVEKGLKANEWVQHVSSILGGK-GGGKAESAQASGSNFER 950

Query: 956 VTPAMDLAAEFAAMKL 971
           V   + LA +FA  KL
Sbjct: 951 VDEIVQLANQFAQAKL 966


>gi|297284439|ref|XP_002808351.1| PREDICTED: LOW QUALITY PROTEIN: alanyl-tRNA synthetase,
           cytoplasmic-like [Macaca mulatta]
          Length = 967

 Score =  832 bits (2149), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 453/966 (46%), Positives = 603/966 (62%), Gaps = 64/966 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A+++R  F  FF+   H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  ++KL
Sbjct: 7   ASEIRQRFIDFFKRNEHTYIHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A + A ELLT+ +
Sbjct: 67  SRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +P  RLY TYFGGDE AGL PD E + IW    L  +++LP   KDNFWEMGDTGPCGP
Sbjct: 127 GIPIGRLYVTYFGGDEAAGLEPDLECKQIWQNLGLDDTKILPGNMKDNFWEMGDTGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G RDAA LVN DDP  +EIWN+VFIQ+NRE+DG LKPLP K +DTG+G ER
Sbjct: 187 CSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNREADGILKPLPKKSIDTGMGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+F+P F+AIQ+ TGARPY+GKVGA+DAD +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR ++LR   R A R+         GF   L+ ++    GD FPELK+
Sbjct: 307 VALADGGRPDNTGRGFLLREPPRPARRFFKRGXGIVFGFIQPLI-LLPLCQGDAFPELKR 365

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
               +++I+  EE  F KTL +G     +  Q +   K + G  A++L+DTYGFP+DLT 
Sbjct: 366 DPDMVKDIVNEEEVQFLKTLSRGRRILDRKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTG 425

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
           L+AEE+GL+VD++GF      A+ +S   Q K AGG   I++D  A   L  RG+  TDD
Sbjct: 426 LIAEEKGLVVDMDGFEEERKLAQLKS---QGKGAGGEDLIMLDIYAIEELRARGLEVTDD 482

Query: 536 SFKFIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           S K+ +         F++  + + A+     F+E V  G E G+VL  + FYAEQGGQI+
Sbjct: 483 SPKYNYHLDFSGSYVFENTVATVMALRREKMFVEEVSTGQECGVVLDKTCFYAEQGGQIY 542

Query: 587 DEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           DEG++  +  S      F V+N Q+ GG+V+HIG++    G   VG++V   +D  RR+ 
Sbjct: 543 DEGYLVKVDDSSEDKTEFTVKNAQVRGGYVLHIGTIY---GDLKVGDQVRLFIDEPRRRP 599

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           I  NHT TH+LNFALR VLG+  DQKGS+V P++LRFDF+    +  + +++ E I NE 
Sbjct: 600 IMSNHTATHILNFALRSVLGE-ADQKGSLVAPDRLRFDFTAKGAMSTQQIKKAEEIANEM 658

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I+A   V++++  LA AK I GLRAVF E YPDPVRVV+IG  V +LL DP        S
Sbjct: 659 IEAAKPVYTQDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTS 718

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEK------- 813
            E CGGTHL N+  A AF +++EE IAKGIRRI AVT   A KA   A SL+K       
Sbjct: 719 VEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKAESLKKSLSVMEA 778

Query: 814 --------------EVDDASKIEGSLL----EKNQVRKAQKKVAE--ENLQKAVK----- 848
                         E+ D  +   + +    +K+++R+  K + +  ++L +A K     
Sbjct: 779 KVKAQTAPNKDVQREIADLGEALATAVIPQWQKDELRETLKSLKKVMDDLDRASKADVQK 838

Query: 849 -VATETAEAAASN-GKPFCISRVEVGLDAAAVREAV-LKVIEQKGMPVMVFSTDETTNKA 905
            V  +T +   SN  +P  I  +E G  A A+ EA+ L          M+F+ D    K 
Sbjct: 839 RVLEKTKQLIDSNPNQPLVILEMESGASAKALNEALKLFKTHSPQTSAMLFTVDNEAGKI 898

Query: 906 VVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAE 965
                VP+ +  ++ L+ SEW+      + G+ G GK   A   G +   +  A+ LA  
Sbjct: 899 TCLCQVPQNA-ANRGLKASEWVQQVSGLMDGK-GGGKDVSAQATGKNIGCLQEALQLATS 956

Query: 966 FAAMKL 971
           FA ++L
Sbjct: 957 FAQLRL 962


>gi|24582809|ref|NP_523511.2| Alanyl-tRNA synthetase, isoform A [Drosophila melanogaster]
 gi|45552267|ref|NP_995656.1| Alanyl-tRNA synthetase, isoform B [Drosophila melanogaster]
 gi|75027177|sp|Q9VLM8.1|SYAC_DROME RecName: Full=Alanine--tRNA ligase, cytoplasmic; AltName:
           Full=Alanyl-tRNA synthetase; Short=AlaRS
 gi|7297398|gb|AAF52657.1| Alanyl-tRNA synthetase, isoform A [Drosophila melanogaster]
 gi|45445248|gb|AAS64737.1| Alanyl-tRNA synthetase, isoform B [Drosophila melanogaster]
          Length = 966

 Score =  832 bits (2148), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 443/970 (45%), Positives = 592/970 (61%), Gaps = 68/970 (7%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A +VR+ +  FF+++ H+   SS  +P++DPTLLFANAGMNQ+KPIFLGTADPN+++SK 
Sbjct: 6   AKEVRNAYLDFFKEQKHIYVHSSSTIPLDDPTLLFANAGMNQFKPIFLGTADPNSEMSKW 65

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFGDYFK E   WAWE LT+  
Sbjct: 66  VRVANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKEICSWAWEFLTQRL 125

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            LP DRLY TYFGGD  +GL PD E + +WL   L    +LP   KDNFWEMG+TGPCGP
Sbjct: 126 ALPKDRLYVTYFGGDAASGLEPDLECKQMWLDLGLKPEHILPGSMKDNFWEMGETGPCGP 185

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSE+H+DR G R    LVN DDP  +EIWN+VFIQ+NRESDGSLK LP KH+D G+GFER
Sbjct: 186 CSELHFDRIGGRSVPELVNMDDPDVLEIWNLVFIQYNRESDGSLKQLPKKHIDCGMGFER 245

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S++QNK SNYDTD+F+P+FDAIQ  TGA PY G+VGADD D +DMAYRV+ADH RT++
Sbjct: 246 LVSVIQNKRSNYDTDLFVPLFDAIQAGTGAPPYQGRVGADDVDGIDMAYRVLADHARTIT 305

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY +E L A+ GFF  LVN VV ++GD FPE+K+
Sbjct: 306 IALADGGTPDNTGRGYVLRRILRRAVRYATEKLNAKPGFFATLVNTVVDLLGDAFPEVKK 365

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK-VLSGQDAFILWDTYGFPLDLTQ 477
              HI +II  EE  F KTL +G     +  + +  +  + G  A+ L+DTYGFP+DLTQ
Sbjct: 366 DPQHIIDIINEEELQFLKTLTRGRNLLNRTIEKLGNQTTIPGDVAWRLYDTYGFPVDLTQ 425

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA-----IVMDADATAALHKRGVLA 532
           LMAEE+ L +D++G+  A      +  S    Q  GA     I +D  A + L ++GV  
Sbjct: 426 LMAEEKSLKIDMDGYEAA------KHNSYVLSQGKGASKIEEINLDVHAISQLQEQGVPP 479

Query: 533 TDDSFKFIW--FQDHK----------SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAE 580
           T+D+FK+ +    D +          S I A+   ++F+  +  G + GIVL  ++FYAE
Sbjct: 480 TNDTFKYKYEAVSDERDSAYNYGVCNSKIVALRFENQFVNEITSGQKAGIVLDKTNFYAE 539

Query: 581 QGGQIFDEGFIEGL---FGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDR 637
            GGQI+D+G +  +      F V  V   GG+++HIG +    G   VG+E+   +D +R
Sbjct: 540 SGGQIYDQGALVKVNDEANEFLVDRVYNRGGYILHIGVV---EGTLKVGDELELHIDVER 596

Query: 638 RKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIV 697
           R L   NH+ TH LN  L +VLG   +QKGS+V+PEKLRFDF+    +  E + + E + 
Sbjct: 597 RWLTMKNHSATHALNHCLLQVLGKDTEQKGSLVVPEKLRFDFNSKAAMTIEQVSKTEQLT 656

Query: 698 NEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWL 757
            E +   + +++KE+ LA AK I GLR+VF EVYPDPVRV++ G  V++L  +P+++   
Sbjct: 657 KEMVYKNVPIYAKESKLALAKKIRGLRSVFDEVYPDPVRVISFGVPVDELEQNPDSEAGE 716

Query: 758 SISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV-- 815
             S E CGGTHL  +     F + SEE IAKGIRRI A+T   A KA + + + E+E+  
Sbjct: 717 QTSVEFCGGTHLRRSGHIMDFVISSEEAIAKGIRRIVALTGPEALKALKKSEAFEQEIVR 776

Query: 816 ------------DDASKIEGSLLEKNQVRKAQ----KKVAEENLQKAVKVATETAEAA-- 857
                       D  S ++  +    Q+  A     KK    NL K +K   +  E A  
Sbjct: 777 LKATIDNDKSGKDSKSHVKEIVELTEQISHATIPYVKKDEMRNLLKGLKKTLDDKERALR 836

Query: 858 -------ASNGKPFC---------ISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDET 901
                      K  C         + ++E   +  A+  A+ +V  Q      +F + + 
Sbjct: 837 AAVSVTVVERAKTLCEANPNATVLVEQLEAFNNTKALDAALKQVRSQLPDAAAMFLSVDA 896

Query: 902 TNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMD 961
            +K + C     KS   K L+ +EW+      L G+ G GK   A   GT+  +V   + 
Sbjct: 897 DSKKIFCLSSVPKSAVEKGLKANEWVQHVSATLGGKGG-GKPESAQASGTNYEKVDEIVQ 955

Query: 962 LAAEFAAMKL 971
           LA++FA  KL
Sbjct: 956 LASKFAQSKL 965


>gi|425766352|gb|EKV04967.1| Alanyl-tRNA synthetase, putative [Penicillium digitatum Pd1]
 gi|425767085|gb|EKV05667.1| Alanyl-tRNA synthetase, putative [Penicillium digitatum PHI26]
          Length = 958

 Score =  832 bits (2148), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 457/954 (47%), Positives = 606/954 (63%), Gaps = 52/954 (5%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           EW A +VRDTF  +F+   H    SSPV P++DPTLLF NAGMNQ+K IFLGT D ++  
Sbjct: 7   EWTAQRVRDTFLDYFKQNGHTFVPSSPVAPLSDPTLLFTNAGMNQFKSIFLGTVDASSDF 66

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
            K+ RA N+QKC+RAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK EAI ++W LLT
Sbjct: 67  GKMKRATNSQKCLRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAITYSWTLLT 126

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
           +VY L  DRLY TYF G+E  GL PD EA+++W    +P S +LP   KDNFWEMGD GP
Sbjct: 127 EVYGLDPDRLYVTYFEGNEAGGLEPDLEAKELWKSVGVPESHILPGNMKDNFWEMGDQGP 186

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPCSE+HYDR G R+AA LVN DDP  +EIWN VFIQ+NRE+D SL+ LP KHVDTG+G
Sbjct: 187 CGPCSEVHYDRIGGRNAAHLVNEDDPNVLEIWNNVFIQYNREADSSLRSLPNKHVDTGMG 246

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
           FERL SILQ+K SNYDTDVF PIF AIQ  TGAR Y G  GADD+D +D AYRVVADH+R
Sbjct: 247 FERLVSILQDKPSNYDTDVFTPIFQAIQNTTGAREYRGHFGADDSDGIDTAYRVVADHVR 306

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFP 414
           TL FAI+DG  P NEGR YV+RR+LRR  RY  +  + + G FF  LV  VV  +G++FP
Sbjct: 307 TLMFAISDGVIPNNEGRGYVIRRVLRRGARYARKYFQVEIGNFFAKLVPTVVDQLGEMFP 366

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK---VLSGQDAFILWDTYGF 471
           ELK+++  + EI+  EE SF KTL +G  +F++ AQ  + K   +L G D + L+DT+GF
Sbjct: 367 ELKRKQQDVIEILDEEELSFAKTLDRGERQFEQYAQQAKIKDTDMLHGADVWRLYDTFGF 426

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRG-V 530
           P+DLT++MAEERGL +D   F  A  +A+E S+  Q K A   + +D      L K   V
Sbjct: 427 PVDLTRIMAEERGLRIDDVEFEEARLKAKEASK-GQKKAAENTVKLDVHDLGKLEKMNDV 485

Query: 531 LATDDSFKFIWFQDHKSVIKAIYTGSEFIESV--VP-GNEVGIVLASSSFYAEQGGQIFD 587
             TDDS KF    +  S +KAIY G  F  S   VP G ++G++L  ++FYAEQGGQ  D
Sbjct: 486 QKTDDSPKF-GRGNITSHVKAIYHGKTFHNSTDDVPDGAQLGVILDCTNFYAEQGGQEND 544

Query: 588 EG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            G   I+G      V +VQ Y G+V+H G +  G+  F+VG+ VIC+ D  RR  I  NH
Sbjct: 545 TGKIIIDGQ-AELEVGDVQSYAGYVLHTGFMKYGS--FAVGDSVICEYDELRRWPIRNNH 601

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           T TH+LNFAL+E+LGD VDQKGS+V  EKLRFDFSH   +    L +IE+   + I+   
Sbjct: 602 TGTHILNFALKEILGDGVDQKGSLVSAEKLRFDFSHKSAISDAELEKIETKATDYIRQNC 661

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            V+S+E  LA A+ I+G+RAVFGE YPDPVRVV++G ++E++L + ++  W  +S E CG
Sbjct: 662 AVYSQELPLATAQQISGVRAVFGETYPDPVRVVSVGVELEEILQNVKDPRWQEVSIEFCG 721

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVD--------- 816
           GTH+  T + +   +L E GIAKGIRRI AVT   A++   AA      +D         
Sbjct: 722 GTHVQKTGDIKDLVILEENGIAKGIRRIIAVTGEEAHEVQRAAEEFGHRLDRLNALPLGP 781

Query: 817 -----------DASKIEGSLLEKNQVRKAQKKVAEENL-----------QKAVKVATETA 854
                      D +++  S ++K + R+   K+ ++ L           +KAV   T   
Sbjct: 782 EKEQEAKQVQVDLNQLAISAVQKAKFRERFAKINKQVLDGQKAQQKLESKKAVDTITSYF 841

Query: 855 EAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQ-KGMPVMVFSTDETTNKAVVCAGVPE 913
           +A  +  K + + ++ +  +A AV E++  V  + +G  V + + D    +      + +
Sbjct: 842 DAPENQDKSWLVVQLPISANAKAVSESLNHVKSKMQGKSVYLLAADSEQGRVSHGCYISQ 901

Query: 914 K-SDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEF 966
             SDQ      ++W  A +    G    GKG  + G GT+A +V  A+ LAA++
Sbjct: 902 GLSDQGAS--AADW-AAVVSGAVGGKAGGKGPTSIGNGTNADKVEEAISLAADY 952


>gi|17861846|gb|AAL39400.1| GM03058p [Drosophila melanogaster]
          Length = 966

 Score =  831 bits (2147), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 443/970 (45%), Positives = 592/970 (61%), Gaps = 68/970 (7%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A +VR+ +  FF+++ H+   SS  +P++DPTLLFANAGMNQ+KPIFLGTADPN+++SK 
Sbjct: 6   AKEVRNAYLDFFKEQKHIYVHSSSTIPLDDPTLLFANAGMNQFKPIFLGTADPNSEMSKW 65

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFGDYFK E   WAWE LT+  
Sbjct: 66  VRVANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKEICSWAWEFLTQRL 125

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            LP DRLY TYFGGD  +GL PD E + +WL   L    +LP   KDNFWEMG+TGPCGP
Sbjct: 126 ALPKDRLYVTYFGGDAASGLEPDLECKQMWLDLGLKPEHILPGSMKDNFWEMGETGPCGP 185

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSE+H+DR G R    LVN DDP  +EIWN+VFIQ+NRESDGSLK LP KH+D G+GFER
Sbjct: 186 CSELHFDRIGGRSVPELVNMDDPDVLEIWNLVFIQYNRESDGSLKQLPKKHIDCGMGFER 245

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S++QNK SNYDTD+F+P+FDAIQ  TGA PY G+VGADD D +DMAYRV+ADH RT++
Sbjct: 246 LVSVIQNKRSNYDTDLFVPLFDAIQAGTGAPPYQGRVGADDVDGIDMAYRVLADHARTIT 305

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY +E L A+ GFF  LVN VV ++GD FPE+K+
Sbjct: 306 IALADGGTPDNTGRGYVLRRILRRAVRYATEKLNAKPGFFATLVNTVVDLLGDAFPEVKK 365

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK-VLSGQDAFILWDTYGFPLDLTQ 477
              HI +II  EE  F KTL +G     +  + +  +  + G  A+ L+DTYGFP+DLTQ
Sbjct: 366 DPQHIIDIINEEELQFLKTLTRGRNLLNRTIEKLGNQTTIPGDVAWRLYDTYGFPVDLTQ 425

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA-----IVMDADATAALHKRGVLA 532
           LMAEE+ L +D++G+  A      +  S    Q  GA     I +D  A + L ++GV  
Sbjct: 426 LMAEEKSLKIDMDGYEAA------KHNSYVLSQGKGASKIEEINLDVHAISQLQEQGVPP 479

Query: 533 TDDSFKFIW--FQDHK----------SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAE 580
           T+D+FK+ +    D +          S I A+   ++F+  +  G + GIVL  ++FYAE
Sbjct: 480 TNDTFKYKYDAVSDERDSAYNYGVCNSKIVALRFENQFVNEITSGQKAGIVLDKTNFYAE 539

Query: 581 QGGQIFDEGFIEGL---FGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDR 637
            GGQI+D+G +  +      F V  V   GG+++HIG +    G   VG+E+   +D +R
Sbjct: 540 SGGQIYDQGALVKVNDEANEFLVDRVYNRGGYILHIGVV---EGTLKVGDELELHIDVER 596

Query: 638 RKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIV 697
           R L   NH+ TH LN  L +VLG   +QKGS+V+PEKLRFDF+    +  E + + E + 
Sbjct: 597 RWLTMKNHSATHALNHCLLQVLGKDTEQKGSLVVPEKLRFDFNSKAAMTIEQVSKTEQLT 656

Query: 698 NEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWL 757
            E +   + +++KE+ LA AK I GLR+VF EVYPDPVRV++ G  V++L  +P+++   
Sbjct: 657 KEMVYKNVPIYAKESKLALAKKIRGLRSVFDEVYPDPVRVISFGVPVDELEQNPDSEAGE 716

Query: 758 SISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV-- 815
             S E CGGTHL  +     F + SEE IAKGIRRI A+T   A KA + + + E+E+  
Sbjct: 717 QTSVEFCGGTHLRRSGHIMDFVISSEEAIAKGIRRIVALTGPEALKALKKSEAFEQEIVR 776

Query: 816 ------------DDASKIEGSLLEKNQVRKAQ----KKVAEENLQKAVKVATETAEAA-- 857
                       D  S ++  +    Q+  A     KK    NL K +K   +  E A  
Sbjct: 777 LKATIDNDKSGKDSKSHVKEIVELTEQISHATIPYVKKDEMRNLLKGLKKTLDDKERALR 836

Query: 858 -------ASNGKPFC---------ISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDET 901
                      K  C         + ++E   +  A+  A+ +V  Q      +F + + 
Sbjct: 837 AAVSVTVVERAKALCEANPNATVLVEQLEAFNNTKALDAALKQVRSQLPDAAAMFLSVDA 896

Query: 902 TNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMD 961
            +K + C     KS   K L+ +EW+      L G+ G GK   A   GT+  +V   + 
Sbjct: 897 DSKKIFCLSSVPKSAVEKGLKANEWVQHVSATLGGKGG-GKPESAQASGTNYEKVDEIVQ 955

Query: 962 LAAEFAAMKL 971
           LA++FA  KL
Sbjct: 956 LASKFAQSKL 965


>gi|50545890|ref|XP_500483.1| YALI0B04180p [Yarrowia lipolytica]
 gi|49646349|emb|CAG82710.1| YALI0B04180p [Yarrowia lipolytica CLIB122]
          Length = 960

 Score =  831 bits (2147), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 466/959 (48%), Positives = 603/959 (62%), Gaps = 51/959 (5%)

Query: 58  WPATKVRDTFFKFF-EDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           WPATKVR TF  +F E + H    SS V+P +DPTLLFANAGMNQYKPIFLGT DP++ L
Sbjct: 8   WPATKVRKTFLDYFGEKRAHSFVPSSSVIPYDDPTLLFANAGMNQYKPIFLGTCDPSSPL 67

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
           SKL RA N+QKCIRAGGKHNDLDDVG+D+YHHTFFEMLGNWSFGDYFK EA  WAWELLT
Sbjct: 68  SKLNRAANSQKCIRAGGKHNDLDDVGRDSYHHTFFEMLGNWSFGDYFKAEACAWAWELLT 127

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
           +VY L ADRLY +YFGGD+K GL PD EA+ IW+   +    +LP    DNFWEMGD GP
Sbjct: 128 QVYGLDADRLYVSYFGGDDKLGLQPDLEAKQIWMDLGVAEDHILPGDSADNFWEMGDQGP 187

Query: 236 CGPCSEIHYDRT-GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           CGPCSEIHYDR  G R+A  LVN DDP  +EIWNIVFIQ+NRE+D SLKPLPAKH+DTG+
Sbjct: 188 CGPCSEIHYDRIGGGRNARDLVNMDDPNVLEIWNIVFIQYNREADKSLKPLPAKHIDTGM 247

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL S+LQ+K SNYDTDVF PIF  IQ+ TGAR Y+GK GA+DAD +D AYRVVADH+
Sbjct: 248 GFERLVSVLQDKSSNYDTDVFTPIFAKIQELTGARDYAGKFGAEDADGIDTAYRVVADHV 307

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVF 413
           RTL+FA+ADG  P N+GR YVLRRILRR  R+  +      G FF+ L   +++ + ++F
Sbjct: 308 RTLTFALADGGVPNNDGRGYVLRRILRRGARFVRKKFDVPIGSFFSQLAPTLIEQVNEIF 367

Query: 414 PELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK---VLSGQDAFILWDTYG 470
           PEL +R   I EI+  EE SF +TL +G + F++ A D +     VL+G+D + L+DTYG
Sbjct: 368 PELSKRTEDIFEILNDEEQSFSRTLDRGEKLFEQYAADAKANSKTVLAGKDVWRLYDTYG 427

Query: 471 FPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKR 528
           FP+DLT++MAEE GL +D   F+ A  E+ E S+  + K AGG   + +D  A A L K 
Sbjct: 428 FPVDLTRIMAEEAGLDIDEAAFDKAKQESLEASKGGK-KTAGGVQLVKLDVHALAELEKN 486

Query: 529 -GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESV-VPGNEVGIVLASSSFYAEQGGQIF 586
             V  TDD  KF       + + AIY G+ F++SV     +VG++L  +  YAE GGQ +
Sbjct: 487 DAVPKTDDQAKFTESNLSDAKVVAIYNGTGFVDSVDESAGQVGLLLDKTCMYAESGGQEY 546

Query: 587 DEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           D G   I+G    F V NVQ+Y G+V+H G+   G+    +G+ V    D  RR  +  N
Sbjct: 547 DTGKIVIDGQ-TEFDVNNVQVYAGYVLHTGNFNYGS--LKIGDVVNVGFDTARRTPLKNN 603

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           HT TH+LN+AL+E LGD +DQKGS+V  EKLRFDFSH   + P  + ++E I N  I   
Sbjct: 604 HTGTHVLNYALKETLGDTIDQKGSLVASEKLRFDFSHKAGLTPAEVAKVEDISNAYITKN 663

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
           L V++K   L  AK ING+RAVFGE YPDPVRVV++G  VEDL+A+P++ +W   S E C
Sbjct: 664 LAVYAKSVDLTTAKKINGVRAVFGETYPDPVRVVSVGVPVEDLIANPDDAKWAEYSVEFC 723

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVD-------- 816
           GGTH+  T E +   ++ E GIAKGIRRI AVT   A    + A   ++ +D        
Sbjct: 724 GGTHVGKTGEIKHLVIIEESGIAKGIRRIVAVTGKEAADVQKLAAEFDERLDKLAAQPLG 783

Query: 817 ----DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATE------TAEAAASNG----- 861
                A+K  G  L+K  V    K   +E   K  K  T+       AE+ AS       
Sbjct: 784 ADKEQAAKAIGVELKKLSVSTTSKLALQEKFNKIQKTITDGIKAKLKAESKASTDLVSSY 843

Query: 862 ------KPFCISRV-EVGLDAAAVREAVLKVIEQ-KGMPVMVFSTDETTNKAVVCAGVPE 913
                   + ++ V ++  ++ A+ E +  V  +  G  V +F+      K V  A   +
Sbjct: 844 FEKNPEATYLVAHVPDISANSKALSETINHVKSKLPGKSVYLFAGSPAEGK-VAHACFID 902

Query: 914 KSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAM-DLAAEFAAMKL 971
           +S  +K L   +    A   + GR G GKG    G G +A ++  A+ +L  E   + L
Sbjct: 903 ESVSNKGLTAQQMGAIAAGLVGGRSG-GKGPTIQGSGDNADKIADAVSELEKEITKLGL 960


>gi|358372805|dbj|GAA89407.1| alanyl-tRNA synthetase [Aspergillus kawachii IFO 4308]
          Length = 961

 Score =  831 bits (2147), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 440/890 (49%), Positives = 585/890 (65%), Gaps = 50/890 (5%)

Query: 56  VEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQ 115
           +EW + +VRDTF ++F++  H    SSPVVP +DPTLLF NAGMNQ+K IFLGT DP++ 
Sbjct: 9   LEWTSKRVRDTFLQYFKENGHTFVASSPVVPHSDPTLLFTNAGMNQFKSIFLGTVDPHSD 68

Query: 116 LSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELL 175
            + L  A NTQKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK EAI ++WELL
Sbjct: 69  FANLKSAVNTQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKEEAIRYSWELL 128

Query: 176 TKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTG 234
           TK+Y L   RLY TYF G+++ GL PD EA+D+W    +P   +LP   KDNFWEMGD G
Sbjct: 129 TKIYGLDPGRLYVTYFEGNKEGGLEPDLEAKDLWKAVGVPEDHILPGNMKDNFWEMGDQG 188

Query: 235 PCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           PCGPCSEIHYDR G R+AA LVN DDP  +EIWN VFIQ+NRE+D SL+PLP KHVDTG+
Sbjct: 189 PCGPCSEIHYDRVGGRNAAHLVNQDDPNVLEIWNNVFIQYNRETDRSLRPLPNKHVDTGM 248

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL SILQNK SNYDTDVF PIF  I+  TGAR Y G  G+DD+D +D AYRV+ADH+
Sbjct: 249 GFERLVSILQNKSSNYDTDVFTPIFQTIRDVTGAREYRGSFGSDDSDGIDTAYRVIADHV 308

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVF 413
           RTL FAI+DG+ P N+GR YV+RR+LRR  RY  +    + G FF+ +V  VV  +GD+F
Sbjct: 309 RTLMFAISDGAVPNNDGRGYVIRRVLRRGARYARKYFGVEIGNFFSKIVPTVVDQLGDMF 368

Query: 414 PELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK---VLSGQDAFILWDTYG 470
           PEL++++  + EI+  EE SF KTL +G  +F+  AQ  + K    L G D + L+DT+G
Sbjct: 369 PELRRKQPDVMEILDEEEMSFAKTLDRGERQFEHYAQQAKAKGADKLHGADVWRLYDTFG 428

Query: 471 FPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRG- 529
           FP+DLT++MAEERGL +D   F  A   A+E S+  Q K +   + +D      L     
Sbjct: 429 FPVDLTRIMAEERGLQIDDREFEEARSRAKEASK-GQKKTSAETVKLDVHDLGKLEAMND 487

Query: 530 VLATDDSFKFIWFQDHKSVIKAIYTGSEFIESV--VP-GNEVGIVLASSSFYAEQGGQIF 586
           V  TDD+ KF    +  + +KAIY G  F  S   VP G ++GI+L  ++FYAEQGGQ  
Sbjct: 488 VPKTDDTAKF-GKGNITAQVKAIYQGKMFHSSTDEVPDGEQLGIILDRTNFYAEQGGQEN 546

Query: 587 DEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           D G   I+G      V +VQ+Y G+V+H G +  G+   SVG+ VIC+ D  RR  I  N
Sbjct: 547 DTGKIVIDGQ-SELEVGDVQLYAGYVLHTGFMKYGS--ISVGDTVICEYDELRRWPIRNN 603

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           HT TH+LNFALR VLGD V+QKGS+V  EKLRFDFSH   +  + L RIE I  E I+  
Sbjct: 604 HTGTHILNFALRTVLGDGVEQKGSLVAAEKLRFDFSHKSAISDKDLARIEEISTEYIRQN 663

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
             V+S+E  LA A+ I+G+RAVFGE YPDPVRVV++G ++ ++L + ++  W  +S E C
Sbjct: 664 CTVYSQELPLATAREISGVRAVFGETYPDPVRVVSVGVELGEILQNVKDPRWKEVSIEFC 723

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVD-------- 816
           GGTH+  T + +   +L E GIAKGIRRI AVT   A++    A   +K +D        
Sbjct: 724 GGTHVQKTGDIKDLIVLEEGGIAKGIRRIIAVTGEDAHEVQRLAAEFQKRLDRLEAMPLT 783

Query: 817 -----DASKIEGSL-------LEKNQVRKAQKKVAEENL--QKAV-----KVATETA--- 854
                +A +I+  L       ++K+  R+   ++ +E L  QKA+     KVA ET    
Sbjct: 784 PEKEKEAKQIQAELNQLSISAVQKSAFRERFARINKEVLDGQKALQKLESKVALETITNY 843

Query: 855 -EAAASNGKPFCISRVEVGLDAAAVREAVLKV---IEQKGMPVMVFSTDE 900
            +A  +  + + ++++ +  ++ A+ E++  V   + +K + V+  STD+
Sbjct: 844 FQAPENQDRSWLVAKLPISANSKAISESLNYVKSKLPEKSVYVLAASTDQ 893


>gi|195473021|ref|XP_002088795.1| GE11031 [Drosophila yakuba]
 gi|194174896|gb|EDW88507.1| GE11031 [Drosophila yakuba]
          Length = 966

 Score =  831 bits (2146), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 443/970 (45%), Positives = 592/970 (61%), Gaps = 68/970 (7%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A +VR+ +  FF+++ H+   SS  +P++DPTLLFANAGMNQ+KPIFLGTADPN+++SK 
Sbjct: 6   AKEVRNAYLDFFKEQKHIYVHSSSTIPLDDPTLLFANAGMNQFKPIFLGTADPNSEMSKW 65

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFGDYFK E   WAWE LT+  
Sbjct: 66  VRVANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKEICSWAWEFLTQRL 125

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            LP DRLY TYFGGDE +GL PD E + +WL   L    +LP   KDNFWEMG+TGPCGP
Sbjct: 126 SLPKDRLYVTYFGGDEASGLEPDLECKQMWLDLGLKPEHILPGSMKDNFWEMGETGPCGP 185

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSE+H+DR G R    LVN DDP  +EIWN+VFIQ+NRESDGSLK LP KH+D G+GFER
Sbjct: 186 CSELHFDRIGGRSVPELVNMDDPDVLEIWNLVFIQYNRESDGSLKQLPKKHIDCGMGFER 245

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S++QNK SNYDTD+F+P+FDAIQ  TGA  Y G+VGADD D +DMAYRV+ADH RT++
Sbjct: 246 LVSVIQNKRSNYDTDLFVPLFDAIQAGTGAPAYQGRVGADDVDGIDMAYRVLADHARTIT 305

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY +E L A+ GFF  LVN VV ++GD FPE+K+
Sbjct: 306 IALADGGTPDNTGRGYVLRRILRRAVRYATEKLNAKPGFFATLVNTVVDLLGDAFPEVKK 365

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK-VLSGQDAFILWDTYGFPLDLTQ 477
              HI +II  EE  F KTL +G     +  + +  +  + G  A+ L+DTYGFP+DLTQ
Sbjct: 366 DPQHIIDIINEEELQFLKTLTRGRNLLNRTIEKLGNQTTIPGDVAWRLYDTYGFPVDLTQ 425

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA-----IVMDADATAALHKRGVLA 532
           LMAEE+ L +D++G+  A      +  S    Q  GA     I +D  A + L ++GV  
Sbjct: 426 LMAEEKSLKIDMDGYEAA------KHNSYVLSQGKGASKIEEINLDVHAISQLQEQGVPP 479

Query: 533 TDDSFKFIW--FQDHK----------SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAE 580
           T+D+FK+ +    D +          S I A+   ++F+  +  G + GIVL  ++FYAE
Sbjct: 480 TNDTFKYKYEAVSDERDSAYNYGVCNSKIVALRFENQFVNEITSGQKAGIVLDKTNFYAE 539

Query: 581 QGGQIFDEGFIEGL---FGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDR 637
            GGQI+D+G +  +      F V  V   GG+++HIG +    G   VG+E+   +D +R
Sbjct: 540 SGGQIYDQGALVKVNDEANEFLVDRVYNRGGYILHIGVV---EGTLKVGDELELHIDVER 596

Query: 638 RKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIV 697
           R L   NH+ TH LN  L +VLG   +QKGS+V+PEKLRFDF+    +  E + + E + 
Sbjct: 597 RWLTMKNHSATHALNHCLLQVLGKDTEQKGSLVVPEKLRFDFNSKGAMTIEQVSKTEQLT 656

Query: 698 NEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWL 757
            E +   + +++KE+ LA AK I GLR+VF EVYPDPVRV++ G  V++L  +P+++   
Sbjct: 657 KEMVYKNVPIYAKESKLALAKKIRGLRSVFDEVYPDPVRVISFGVSVDELEQNPDSEAGE 716

Query: 758 SISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV-- 815
             S E CGGTHL  +     F + SEE IAKGIRRI A+T   A KA + + + E+E+  
Sbjct: 717 QTSVEFCGGTHLRRSGHIMDFVISSEEAIAKGIRRIVALTGPEALKALKKSEAFEQEIIR 776

Query: 816 ------------DDASKIEGSLLEKNQVRKAQ----KKVAEENLQKAVKVATETAEAA-- 857
                       D  S ++  +    Q+  A     KK    NL K +K   +  E A  
Sbjct: 777 LKATIDTDKSGKDSKSHVKEIVELTEQISHATIPYVKKDEMRNLLKGLKKTLDDKERALR 836

Query: 858 -------ASNGKPFC---------ISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDET 901
                      K  C         + ++E   +  A+  A+ +V  Q      +F + + 
Sbjct: 837 AAVSVTVVERAKALCEANPNATVLVEQLEAFNNTKALDAALKQVRSQLPDAAAMFLSVDA 896

Query: 902 TNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMD 961
            +K + C     KS   K L+ +EW+      L G+ G GK   A   GT+  +V   + 
Sbjct: 897 DSKKIFCLSSVPKSAVEKGLKANEWVQHVSATLGGKGG-GKPESAQASGTNFEKVDEIVQ 955

Query: 962 LAAEFAAMKL 971
           LA++FA  KL
Sbjct: 956 LASKFAQSKL 965


>gi|388583424|gb|EIM23726.1| hypothetical protein WALSEDRAFT_31222 [Wallemia sebi CBS 633.66]
          Length = 946

 Score =  830 bits (2143), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 459/956 (48%), Positives = 595/956 (62%), Gaps = 55/956 (5%)

Query: 55  VVEWPATKVRDTFFKFFEDKN-HVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPN 113
           + EW A +VR T+  +F+ ++ H    SS  +P  DPTLLFANAGMNQYK IFLGT D N
Sbjct: 1   MTEWTAKRVRSTYIDYFKQQHAHTFVPSSSSIPYEDPTLLFANAGMNQYKSIFLGTVDKN 60

Query: 114 TQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWE 173
           +Q  +L RA N+QKC+RAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK EAIE AW+
Sbjct: 61  SQFGQLKRAVNSQKCVRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAIEMAWK 120

Query: 174 LLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGD 232
           LL  VY+LPAD+LY TYF GD K GL PD EARDIW    LP   +L     DNFWEMG 
Sbjct: 121 LLVDVYKLPADQLYVTYFEGDPKQGLEPDYEARDIWRSLGLPDDHILTGDATDNFWEMGA 180

Query: 233 TGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDT 292
           TGPCGPCSEIH+DR G R+AA +VN DDP  IEIWN VF+QFNRE+DGSL+PLPAKH+DT
Sbjct: 181 TGPCGPCSEIHFDRIGGRNAAHIVNADDPNVIEIWNNVFMQFNREADGSLRPLPAKHIDT 240

Query: 293 GLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVAD 352
           GLGFERL SILQNK SNYDTDVF PIF+ IQQ T ARPY+G +GA+D D +D AYRV+AD
Sbjct: 241 GLGFERLVSILQNKPSNYDTDVFTPIFEKIQQMTKARPYAGTLGAEDVDGIDTAYRVIAD 300

Query: 353 HIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGD 411
           H+RTL+  I+DG  P N GR YVLRRILRR  RY  +      G FF+ L  +V++ MGD
Sbjct: 301 HVRTLTITISDGGVPNNVGRGYVLRRILRRGCRYARKKFGVPIGSFFSTLAPVVIEQMGD 360

Query: 412 VFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQ---DVQGKVLSGQDAFILWDT 468
           +FPE+ ++   I+EI+  EE SF +TL +G + F   AQ   +   K L G++ + L+DT
Sbjct: 361 MFPEITKKYDDIKEILDEEEESFSRTLDRGEKLFDSYAQKTLNTPEKQLGGKEVWRLYDT 420

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT LMAEE GL +++E F  A  E+ E S+  + K    ++  D    AAL K 
Sbjct: 421 YGFPVDLTVLMAEELGLTINMEEFEKARIESHEASKGTKKKGDVESVKFDVHDLAALEKD 480

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNE---VGIVLASSSFYAEQG 582
            +  TDD +K+     H +V   I +I+   +F +S    N     GI+L  ++FYAE G
Sbjct: 481 NIAKTDDIYKYT----HGTVDAKIISIFQDRQFHKSTKDINTSKPFGILLDKTNFYAESG 536

Query: 583 GQIFDEGF--IEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           GQ +D G   I+G    F V +VQ+Y G+V+H G+L    G  ++ ++VI   D  RR  
Sbjct: 537 GQEYDTGMITIDGK-ADFAVEDVQVYSGYVLHSGALK--YGELNLNDDVIATYDELRRWP 593

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           I  NHT TH+LNFAL+EVLGDH+DQKGS+V P KLRFDF+H   +    L ++E + ++ 
Sbjct: 594 IKNNHTGTHLLNFALKEVLGDHIDQKGSLVAPTKLRFDFNHKAGLSVAELNKVEDLCDQF 653

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           IK  + VFS+E  L +A+ I GLRAVFGEVYPDPVRVV++    +D+  D EN++W   S
Sbjct: 654 IKRNVPVFSQEFNLDDARKIPGLRAVFGEVYPDPVRVVSVEFNPQDIKHDIENEKWSKSS 713

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLE-------- 812
            E CGGTH++ T E + F ++ E  IAKGIRRI AVT   A +    +  L         
Sbjct: 714 IEFCGGTHVNTTGEIKLFKIVEESSIAKGIRRIIAVTADDAVEVMRKSSELANKLAFIDG 773

Query: 813 ----KEVDDASK---IEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAA------- 858
               KE D A K   +E    E + +RK + +     ++K V  A + A+AA        
Sbjct: 774 LTDMKEKDIALKAYAVEIGQAEISTIRKIELREQYNKIRKTVDDANKAAQAAQAKYAGDT 833

Query: 859 --------SNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAG 910
                      K F +  +++G +  A+ +A L    Q G  V VFS D+  +K      
Sbjct: 834 IKNYFNENEEAKSF-VGTLDLGSNTKALGQA-LSAARQLGKQVYVFSVDKDASKVAHQCY 891

Query: 911 VPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEF 966
           +P K           W     + L G+ G GK   A G G++ ++V  A+  A  F
Sbjct: 892 IP-KELLKDGYNAKIWAAKVAEILGGKAG-GKDDSAQGVGSEVSKVEEAIGAAKSF 945


>gi|134083795|emb|CAK47129.1| unnamed protein product [Aspergillus niger]
          Length = 961

 Score =  829 bits (2142), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 441/894 (49%), Positives = 588/894 (65%), Gaps = 51/894 (5%)

Query: 52  DPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTAD 111
           DP++ EW + +VRDTF ++F++  H    SSPVVP +DPTLLF NAGMNQ+K IFLGT D
Sbjct: 6   DPKL-EWTSKRVRDTFLQYFKENGHTFVASSPVVPHSDPTLLFTNAGMNQFKSIFLGTVD 64

Query: 112 PNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWA 171
           P++  + L  A N+QKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK +AI ++
Sbjct: 65  PHSDFANLKSAVNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKDAIRYS 124

Query: 172 WELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEM 230
           WELLTK+Y L   RLY TYF G+++ GL PD EA+D+W    +P   +LP   KDNFWEM
Sbjct: 125 WELLTKIYGLDPRRLYVTYFEGNKEGGLEPDLEAKDLWKAVGVPEDHILPGNMKDNFWEM 184

Query: 231 GDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHV 290
           GD GPCGPCSEIHYDR G R+AA LVN DDP  +EIWN VFIQ+NRE+D SL+PLP KHV
Sbjct: 185 GDQGPCGPCSEIHYDRIGGRNAAHLVNQDDPNVLEIWNNVFIQYNRETDRSLRPLPNKHV 244

Query: 291 DTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVV 350
           DTG+GFERL S+LQNK SNYDTDVF PIF  I+  TGAR Y G  G+DDAD +D AYRV+
Sbjct: 245 DTGMGFERLVSVLQNKSSNYDTDVFTPIFQTIRDVTGAREYRGCFGSDDADGIDTAYRVI 304

Query: 351 ADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVM 409
           ADH+RTL FAI+DG+ P N+GR YV+RR+LRR  RY  +    + G FF+ +V  VV  +
Sbjct: 305 ADHVRTLMFAISDGAVPNNDGRGYVIRRVLRRGARYARKYFGVEIGNFFSKIVPTVVDQL 364

Query: 410 GDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK---VLSGQDAFILW 466
           GD+FPEL++++  + EI+  EE SF KTL +G  +F+  AQ  + K    L G D + L+
Sbjct: 365 GDMFPELRRKQPDVMEILDEEEMSFAKTLDRGERQFEHYAQQAKAKGADKLHGADVWRLY 424

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DT+GFP+DLT++MAEERGL +D   F  A   A+E SR  Q K +   + +D      L 
Sbjct: 425 DTFGFPVDLTRIMAEERGLQIDDREFEEARSRAKEASR-GQKKTSAETVKLDVHDLGKLE 483

Query: 527 KRG-VLATDDSFKFIWFQDHKSVIKAIYTGSEFIESV--VP-GNEVGIVLASSSFYAEQG 582
               V  TDD+ KF    +  + +KAIY G  F  S   VP G ++GI+L  ++FYAEQG
Sbjct: 484 AMNDVPKTDDTAKF-GKGNITAQVKAIYHGKTFHSSTDEVPDGEQLGIILDRTNFYAEQG 542

Query: 583 GQIFDEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           GQ  D G   I+G      V +VQ+Y G+V+H G +  G+  FSVG+ VIC+ D  RR  
Sbjct: 543 GQENDTGKIVIDGQ-SELEVGDVQLYAGYVLHTGFMKYGS--FSVGDTVICEYDELRRWP 599

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           I  NHT TH+LNFALR VLGD V+QKGS+V  EKLRFDFSH   +  + L RIE I  E 
Sbjct: 600 IRNNHTGTHILNFALRTVLGDGVEQKGSLVAAEKLRFDFSHKSAISDKDLARIEEISTEY 659

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I+    V+S+E  LA A+ I+G+RAVFGE YPDPVRVV++G ++ ++L + ++  W  +S
Sbjct: 660 IRQNCTVYSQELPLATAREISGVRAVFGETYPDPVRVVSVGVELGEILQNVKDPRWKEVS 719

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVD---- 816
            E CGGTH+  T + +   +L E GIAKGIRRI AVT   A++    A   +K +D    
Sbjct: 720 IEFCGGTHVQKTGDIKDLIVLEEGGIAKGIRRIIAVTGEDAHEVQRLAAEFQKRLDLLEA 779

Query: 817 ---------DASKIEGSL-------LEKNQVRKAQKKVAEENL--QKAV-----KVATET 853
                    +A +I+  L       ++K+  R+   ++ +E +  QKA+     KVA ET
Sbjct: 780 MPLTPEKEKEAKQIQAELNQLSISAVQKSAFRERFARINKEVIDGQKALQKLESKVALET 839

Query: 854 A----EAAASNGKPFCISRVEVGLDAAAVREAVLKV---IEQKGMPVMVFSTDE 900
                +A  +  + + ++++ +  ++ A+ E++  V   +  K + V+  STD+
Sbjct: 840 ITNYFQAPENQDRSWLVAKLPISANSKAISESLNYVKSKLPDKSVYVLAASTDQ 893


>gi|239608271|gb|EEQ85258.1| alanyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
          Length = 962

 Score =  829 bits (2142), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 452/953 (47%), Positives = 606/953 (63%), Gaps = 50/953 (5%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           EW A +VR+ F  FF++  H    SS VVP++DPTLLF NAGMNQYK IFLGT DPN+  
Sbjct: 11  EWSALRVRNAFLDFFKENGHTFVPSSSVVPLSDPTLLFTNAGMNQYKSIFLGTVDPNSDF 70

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
           + L RA N+QKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK EAI ++W+LLT
Sbjct: 71  ATLKRAHNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAISYSWDLLT 130

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
           KVY L  DRLY TYF G+  AG+ PD EA+++WL   +    +L    KDNFWEMG+ GP
Sbjct: 131 KVYGLEPDRLYVTYFEGNPDAGIGPDLEAKELWLSVGVAEDHLLSGNMKDNFWEMGEQGP 190

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPCSEIHYDR G R+AA LVN DDP  +EIWN VFIQ+NRE D SL+PLP +H+DTG+G
Sbjct: 191 CGPCSEIHYDRIGGRNAAHLVNQDDPNVLEIWNNVFIQYNREPDRSLRPLPNRHIDTGMG 250

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
           +ERL SILQNK SNYDTDVF P+FD I++ TG RPY+GK G +D D +D AYRVVADHIR
Sbjct: 251 YERLVSILQNKSSNYDTDVFTPLFDKIREITGCRPYTGKFGEEDTDGIDTAYRVVADHIR 310

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFP 414
           TL+FAI+DG+ P NEGR YV+RR+LRR  RY  + L  + G FF+ +V  +V+ MGD+FP
Sbjct: 311 TLTFAISDGASPNNEGRGYVVRRVLRRGARYARKYLNVEIGSFFSKIVPTLVEQMGDMFP 370

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK---VLSGQDAFILWDTYGF 471
           E+++++  + EI+  EE SF KTL +G   F++ A   + K    L G D + L+DT+GF
Sbjct: 371 EIRRKQTDVMEILDEEEISFAKTLDRGERLFEEYALQAKQKGLGNLHGADVWRLYDTFGF 430

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK-RGV 530
           P+DLTQLMAEERGL +D   F  A  +A+E S+  Q KQ    + +       L     V
Sbjct: 431 PVDLTQLMAEERGLTIDNAEFEEARLKAKEASK-GQGKQTADVVKLTVHDLGLLETMNNV 489

Query: 531 LATDDSFKFIWFQDHKSVIKAIYTGSEFIESV--VP-GNEVGIVLASSSFYAEQGGQIFD 587
             T+D  KF    +  S IKAIY   +F++S   +P G + GI+L  ++FYAEQGGQ  D
Sbjct: 490 PKTNDDAKF-GRGNITSQIKAIYHNKKFVDSTKDIPEGEQFGIILDRTNFYAEQGGQEND 548

Query: 588 EG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            G   I+G      V +VQ+YGG+++H G +  G+  F+V + VI + D  RR  I  NH
Sbjct: 549 TGKIIIDGK-AELAVEDVQVYGGYILHTGFMKYGS--FNVNDSVIAEYDELRRWPIRNNH 605

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           T TH+LNFALR+VLG+ V+QKGS+V  EKLRFDFSH   V    L +IE I  + I+   
Sbjct: 606 TGTHILNFALRQVLGEGVEQKGSLVAAEKLRFDFSHKSAVSDSDLEKIERISTDYIRQNC 665

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            V++K+  L+ A+ I+G+RAVFGE YPDPVRVV++G ++E++L +  +  W  IS E CG
Sbjct: 666 AVYAKDVPLSTAREISGVRAVFGETYPDPVRVVSVGVELEEILQNVHDPRWKDISIEFCG 725

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSL-------------- 811
           GTH+  T + +   +L E GIAKGIRRI AVT   A++    A                 
Sbjct: 726 GTHVQKTGDIKDLVILEENGIAKGIRRIIAVTGEEAHEVQRIAKEFGERLQRFDKMELGP 785

Query: 812 EKEVD------DASKIEGSLLEKNQVR----KAQKKVAE-----ENLQ--KAVKVATETA 854
           +KE++      D +++  S +EK + R    +  KKV E     + L+  KA+   T   
Sbjct: 786 QKEMEAKLLQVDLNQLTISAVEKVRFRERFTQIHKKVVEGQKAAQKLESKKALDAITGYF 845

Query: 855 EAAASNGKPFCISRVEVGLDAAAVREAVLKV-IEQKGMPVMVFSTDETTNKAVVCAGVPE 913
           E   +   P  + ++ +  +  AV +++  V  + +   V VF+ D+   K V    V +
Sbjct: 846 ETPENKDAPHLVLQLPISANPKAVSDSLNFVKTKMQNKSVYVFAADKGAGKVVHGCHVAQ 905

Query: 914 KSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEF 966
            S  ++    +EW       + GR G GK  +A G GT+A ++  A+  A E+
Sbjct: 906 -SLSAQGATPNEWANTVSSIVGGRAG-GKAPVAIGNGTEAEKLEDAIKAATEY 956


>gi|317036398|ref|XP_001398230.2| alanyl-tRNA synthetase, cytoplasmic [Aspergillus niger CBS 513.88]
          Length = 1019

 Score =  829 bits (2142), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 441/894 (49%), Positives = 588/894 (65%), Gaps = 51/894 (5%)

Query: 52  DPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTAD 111
           DP++ EW + +VRDTF ++F++  H    SSPVVP +DPTLLF NAGMNQ+K IFLGT D
Sbjct: 64  DPKL-EWTSKRVRDTFLQYFKENGHTFVASSPVVPHSDPTLLFTNAGMNQFKSIFLGTVD 122

Query: 112 PNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWA 171
           P++  + L  A N+QKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK +AI ++
Sbjct: 123 PHSDFANLKSAVNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKDAIRYS 182

Query: 172 WELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEM 230
           WELLTK+Y L   RLY TYF G+++ GL PD EA+D+W    +P   +LP   KDNFWEM
Sbjct: 183 WELLTKIYGLDPRRLYVTYFEGNKEGGLEPDLEAKDLWKAVGVPEDHILPGNMKDNFWEM 242

Query: 231 GDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHV 290
           GD GPCGPCSEIHYDR G R+AA LVN DDP  +EIWN VFIQ+NRE+D SL+PLP KHV
Sbjct: 243 GDQGPCGPCSEIHYDRIGGRNAAHLVNQDDPNVLEIWNNVFIQYNRETDRSLRPLPNKHV 302

Query: 291 DTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVV 350
           DTG+GFERL S+LQNK SNYDTDVF PIF  I+  TGAR Y G  G+DDAD +D AYRV+
Sbjct: 303 DTGMGFERLVSVLQNKSSNYDTDVFTPIFQTIRDVTGAREYRGCFGSDDADGIDTAYRVI 362

Query: 351 ADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVM 409
           ADH+RTL FAI+DG+ P N+GR YV+RR+LRR  RY  +    + G FF+ +V  VV  +
Sbjct: 363 ADHVRTLMFAISDGAVPNNDGRGYVIRRVLRRGARYARKYFGVEIGNFFSKIVPTVVDQL 422

Query: 410 GDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK---VLSGQDAFILW 466
           GD+FPEL++++  + EI+  EE SF KTL +G  +F+  AQ  + K    L G D + L+
Sbjct: 423 GDMFPELRRKQPDVMEILDEEEMSFAKTLDRGERQFEHYAQQAKAKGADKLHGADVWRLY 482

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DT+GFP+DLT++MAEERGL +D   F  A   A+E SR  Q K +   + +D      L 
Sbjct: 483 DTFGFPVDLTRIMAEERGLQIDDREFEEARSRAKEASR-GQKKTSAETVKLDVHDLGKLE 541

Query: 527 KRG-VLATDDSFKFIWFQDHKSVIKAIYTGSEFIESV--VP-GNEVGIVLASSSFYAEQG 582
               V  TDD+ KF    +  + +KAIY G  F  S   VP G ++GI+L  ++FYAEQG
Sbjct: 542 AMNDVPKTDDTAKF-GKGNITAQVKAIYHGKTFHSSTDEVPDGEQLGIILDRTNFYAEQG 600

Query: 583 GQIFDEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           GQ  D G   I+G      V +VQ+Y G+V+H G +  G+  FSVG+ VIC+ D  RR  
Sbjct: 601 GQENDTGKIVIDGQ-SELEVGDVQLYAGYVLHTGFMKYGS--FSVGDTVICEYDELRRWP 657

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           I  NHT TH+LNFALR VLGD V+QKGS+V  EKLRFDFSH   +  + L RIE I  E 
Sbjct: 658 IRNNHTGTHILNFALRTVLGDGVEQKGSLVAAEKLRFDFSHKSAISDKDLARIEEISTEY 717

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I+    V+S+E  LA A+ I+G+RAVFGE YPDPVRVV++G ++ ++L + ++  W  +S
Sbjct: 718 IRQNCTVYSQELPLATAREISGVRAVFGETYPDPVRVVSVGVELGEILQNVKDPRWKEVS 777

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVD---- 816
            E CGGTH+  T + +   +L E GIAKGIRRI AVT   A++    A   +K +D    
Sbjct: 778 IEFCGGTHVQKTGDIKDLIVLEEGGIAKGIRRIIAVTGEDAHEVQRLAAEFQKRLDLLEA 837

Query: 817 ---------DASKIEGSL-------LEKNQVRKAQKKVAEENL--QKAV-----KVATET 853
                    +A +I+  L       ++K+  R+   ++ +E +  QKA+     KVA ET
Sbjct: 838 MPLTPEKEKEAKQIQAELNQLSISAVQKSAFRERFARINKEVIDGQKALQKLESKVALET 897

Query: 854 A----EAAASNGKPFCISRVEVGLDAAAVREAVLKV---IEQKGMPVMVFSTDE 900
                +A  +  + + ++++ +  ++ A+ E++  V   +  K + V+  STD+
Sbjct: 898 ITNYFQAPENQDRSWLVAKLPISANSKAISESLNYVKSKLPDKSVYVLAASTDQ 951


>gi|326434145|gb|EGD79715.1| alanyl-tRNA synthetase [Salpingoeca sp. ATCC 50818]
          Length = 955

 Score =  829 bits (2142), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 446/959 (46%), Positives = 600/959 (62%), Gaps = 58/959 (6%)

Query: 58  WPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLS 117
           W A KVR  F  +FE++ H  W SS  +P NDPTLLFANAGMNQYK  FLGT   +T L 
Sbjct: 8   WTADKVRGKFISYFEERGHKFWPSSSTIPFNDPTLLFANAGMNQYKAKFLGTDSKDTDLG 67

Query: 118 KLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTK 177
           KLTRA N+QKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFGDY+K EAI+++W+LLT 
Sbjct: 68  KLTRAVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYWKEEAIDFSWDLLTN 127

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCG 237
           V++L  +RLY TYF GD  + +  D E R +W+K +P  R+LPF  KDNFWEMG+TGPCG
Sbjct: 128 VFQLDPNRLYITYFEGD--SVVPADEETRSLWMKHVPPERILPFDRKDNFWEMGETGPCG 185

Query: 238 PCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFE 297
           PC+EIHYDR G RDA+ LVN DDP  +EIWN+VF+Q+N E +G LK LPA+HVDTG+G E
Sbjct: 186 PCTEIHYDRIGGRDASHLVNMDDPDVLEIWNLVFMQYNNEGNGVLKTLPAQHVDTGMGLE 245

Query: 298 RLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTL 357
           R+ S+LQNK SNYDTD+F+PIF AI++  G R Y+GKV   D D VD AYRVVADHIRTL
Sbjct: 246 RILSVLQNKTSNYDTDLFLPIFAAIKEKCGCREYTGKVNEADTDMVDTAYRVVADHIRTL 305

Query: 358 SFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELK 417
             AIADG  P  +GR Y+LR +LRRA+R+  E L A + FF  LV +VV V+GD FPEL+
Sbjct: 306 CIAIADGGRPDKDGRGYILRLVLRRAIRFCEEYLGAPEYFFASLVPVVVDVLGDAFPELR 365

Query: 418 QREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLT 476
           +       ++  EE  F +TL +G   FK+A   V +  V+ G  A+ LWDTYGFP+ LT
Sbjct: 366 KDPEETIAVLKEEERQFRRTLSRGRRYFKRAVAAVGEDGVIDGDTAWRLWDTYGFPIHLT 425

Query: 477 QLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA-----IVMDADATAALHKRGVL 531
            +MAEERGL VD++GF  A      ++R+ +  +AGGA     + +D +    L K+GV 
Sbjct: 426 IVMAEERGLKVDMDGFEAA------KARAVEISRAGGAAGETNLDLDVNTLDELKKKGVP 479

Query: 532 ATDDSFKFIW---------FQDHKSVIKAIYTGSEFIESVVPGNE------VGIVLASSS 576
            TDD+ K+ +         F D +  + A+ T    +   V  +E      VG+VL  ++
Sbjct: 480 GTDDAAKYAYTRDENGSYSFSDAEGTVLALLTEEGGLVDRVSVSEDDEELPVGVVLDKTN 539

Query: 577 FYAEQGGQIFDEGFIEGLFGS---FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKV 633
           FYAEQGGQI+D G  E   G+     V NVQ  G + +H+ +L +  G   VG+++  K 
Sbjct: 540 FYAEQGGQIYDTGRFESTTGAPLELDVFNVQKRGAYCLHVATLAQ--GELKVGDKLTLKF 597

Query: 634 DYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRI 693
           D+DRR+    NHT TH+LN+ALR VLG+  DQKGS+V PE+LRFDF+  K + PE L++ 
Sbjct: 598 DHDRRRPCMSNHTATHVLNYALRSVLGE-ADQKGSLVEPERLRFDFTAKKGMTPEQLKQT 656

Query: 694 ESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPEN 753
           E +VN+ + A   V+ K+  LA+A+ INGLRA+FGE YPDPVRV+++G  ++D++ADP  
Sbjct: 657 EEVVNKIVNANYTVYDKDTPLAQARAINGLRAMFGETYPDPVRVLSVGASIDDMVADPAA 716

Query: 754 KEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEK 813
              +  S E CGGTH+ N+ +   F +LSEE +AKGIRRI AVT   A KA  AA + E+
Sbjct: 717 SYAVDYSVEFCGGTHVKNSGDIGPFTILSEEAVAKGIRRIVAVTGQEALKAHRAADAYER 776

Query: 814 EV-DDASKIEGSLLE----------------KNQVRKAQKKVAEENL----QKAVKVATE 852
            + DD    E + L+                + +++   KK AE  L     KA    T 
Sbjct: 777 RIRDDLDAKEVTSLDAELGTATIPAVRKEEMRARLKAMSKKHAEARLAERKAKAAHAKTR 836

Query: 853 TAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVP 912
             E      + F +  ++VG +A A+ EA+  + ++      +F   E    A  C  VP
Sbjct: 837 ANELIEEKPEGFVVETLDVGANAKAIGEALKLLKKKLPDVAFMFFGAEEGAVAYTCQ-VP 895

Query: 913 EKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           +     K ++ SEW+    + L    G G+  +A G   D+ ++T A + A  +   +L
Sbjct: 896 KAMVDEKGIKASEWIKRVNEVLG-GRGGGRDLVAQGTADDSTKLTLAQEAARAYIEERL 953


>gi|255948530|ref|XP_002565032.1| Pc22g10240 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211592049|emb|CAP98312.1| Pc22g10240 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 958

 Score =  829 bits (2141), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 461/964 (47%), Positives = 607/964 (62%), Gaps = 57/964 (5%)

Query: 47  AMPGADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIF 106
           A PG+     EW A +VRDTF  +F+   H    SSPV P++DPTLLF NAGMNQ+K IF
Sbjct: 2   ASPGS-----EWTAQRVRDTFLDYFKQNGHTFVPSSPVAPLSDPTLLFTNAGMNQFKSIF 56

Query: 107 LGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNE 166
           LGT D ++   K+ RA N+QKC+RAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK E
Sbjct: 57  LGTVDASSDFGKMKRATNSQKCLRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKE 116

Query: 167 AIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKD 225
           AI ++W LLT+VY L  DRLY TYF G+E  GL PD EA+++W    +P S +LP   KD
Sbjct: 117 AITYSWTLLTEVYGLDPDRLYVTYFEGNEAGGLEPDLEAKELWKSVGVPESHILPGDMKD 176

Query: 226 NFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPL 285
           NFWEMGD GPCGPCSE+HYDR G R+AA LVN DDP  +EIWN VFIQ+NRE D SL+ L
Sbjct: 177 NFWEMGDQGPCGPCSEVHYDRIGGRNAAHLVNEDDPNVLEIWNNVFIQYNREPDSSLRSL 236

Query: 286 PAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDM 345
           P KHVDTG+GFERL SILQNK SNYDTDVF PIF AIQ  TGAR Y G+ GADDAD +D 
Sbjct: 237 PNKHVDTGMGFERLVSILQNKPSNYDTDVFTPIFQAIQNTTGAREYRGQFGADDADGIDT 296

Query: 346 AYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNI 404
           AYRVVADH+RTL FAI+DG  P NEGR YV+RR+LRR  RY  +  +   G FF  LV  
Sbjct: 297 AYRVVADHVRTLMFAISDGVIPNNEGRGYVIRRVLRRGARYARKYFQVDIGNFFAKLVPT 356

Query: 405 VVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK---VLSGQD 461
           VV  +G++FPELK+++  + EI+  EE SF KTL +G  +F++ AQ  + K   +L G D
Sbjct: 357 VVDQLGEMFPELKRKQQDVVEILDEEELSFAKTLDRGERQFEQYAQQAKVKGTDMLHGAD 416

Query: 462 AFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADA 521
            + L+DT+GFP+DLT++MAEERGL +D   F  A  +A+E S+  Q K A   + +D   
Sbjct: 417 VWRLYDTFGFPVDLTRIMAEERGLRIDDVEFEEARLKAKEASK-GQKKAAENTVKLDVHD 475

Query: 522 TAALHKRG-VLATDDSFKFIWFQDHKSVIKAIYTGSEFIESV--VP-GNEVGIVLASSSF 577
              L K   V  TDDS KF    +  + +KAIY G  F +S   VP G ++GI+L  ++F
Sbjct: 476 LGKLEKMNDVQKTDDSPKF-GRGNITAHVKAIYHGKTFHKSTDDVPEGAQLGIILDCTNF 534

Query: 578 YAEQGGQIFDEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDY 635
           YAEQGGQ  D G   I+G      V +VQ Y G+V+H G +  G+  F+VG  VIC+ D 
Sbjct: 535 YAEQGGQENDTGKIIIDGQ-AELEVGDVQSYAGYVLHTGFMKYGS--FTVGNSVICEYDE 591

Query: 636 DRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIES 695
            RR  I  NHT TH+LNFAL+EVLGD V+QKGS+V  EKLRFDFSH   +    L  IE+
Sbjct: 592 LRRWPIRNNHTGTHILNFALKEVLGDGVEQKGSLVAAEKLRFDFSHKTAISDAELENIEA 651

Query: 696 IVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKE 755
              E I+    V+S+E  LA A+ I+G+RAVFGE YPDPVRVV++G ++E++L + ++  
Sbjct: 652 KSTEYIRQNCAVYSQELPLATAQQISGVRAVFGETYPDPVRVVSVGVELEEILKNVKDPR 711

Query: 756 WLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV 815
           W  +S E CGGTH+  T + +   +L E GIAKG+RRI AVT   A++    A    + +
Sbjct: 712 WQEVSIEFCGGTHVQKTGDIKDLIILEESGIAKGVRRIIAVTGEDAHEVQRVAEEFGQRL 771

Query: 816 D--------------------DASKIEGSLLEKNQVRKAQKKVAEENL-----------Q 844
           D                    D +++  S ++K + R+   K+ ++ L           +
Sbjct: 772 DRLNALPLGSEKEQEAKQVQVDLNQLVISAVQKAKFRERFAKINKQVLDGQKAQQKLESK 831

Query: 845 KAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQ-KGMPVMVFSTDETTN 903
           KAV+  T   E   +  K + + ++ +  +A AV E++  V  + +G  V + + D    
Sbjct: 832 KAVEAITSYFETPENQDKSWLVVQLPISANAKAVSESLNHVKSKMQGKSVYLLAADSEQG 891

Query: 904 KAVVCAGVPEK-SDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDL 962
           +      + +  SDQ      S+W  A +    G    GKG  + G GT+  +V  A+ L
Sbjct: 892 RVSHGCYISQGLSDQGAS--ASDW-AAVVSGAVGGKAGGKGPTSIGNGTNTDKVEEAISL 948

Query: 963 AAEF 966
           AA++
Sbjct: 949 AADY 952


>gi|261203393|ref|XP_002628910.1| alanyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239586695|gb|EEQ69338.1| alanyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
          Length = 962

 Score =  829 bits (2141), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 452/953 (47%), Positives = 606/953 (63%), Gaps = 50/953 (5%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           EW A +VR+ F  FF++  H    SS VVP++DPTLLF NAGMNQYK IFLGT DPN+  
Sbjct: 11  EWSALRVRNAFLDFFKENGHTFVPSSSVVPLSDPTLLFTNAGMNQYKSIFLGTVDPNSDF 70

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
           + L RA N+QKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK EAI ++W+LLT
Sbjct: 71  ATLKRAHNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAISYSWDLLT 130

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
           KVY L  DRLY TYF G+  AG+ PD EA+++WL   +    +L    KDNFWEMG+ GP
Sbjct: 131 KVYGLEPDRLYVTYFEGNPDAGIGPDLEAKELWLSVGVAEDHLLSGNMKDNFWEMGEQGP 190

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPCSEIHYDR G R+AA LVN DDP  +EIWN VFIQ+NRE D SL+PLP +H+DTG+G
Sbjct: 191 CGPCSEIHYDRIGGRNAAHLVNQDDPNVLEIWNNVFIQYNREPDRSLRPLPNRHIDTGMG 250

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
           +ERL SILQNK SNYDTDVF P+FD I++ TG RPY+GK G +D D +D AYRVVADHIR
Sbjct: 251 YERLVSILQNKSSNYDTDVFTPLFDKIREITGCRPYTGKFGEEDTDGIDTAYRVVADHIR 310

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFP 414
           TL+FAI+DG+ P NEGR YV+RR+LRR  RY  + L  + G FF+ +V  +V+ MGD+FP
Sbjct: 311 TLTFAISDGASPNNEGRGYVVRRVLRRGARYARKYLNVEIGSFFSKIVPTLVEQMGDMFP 370

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK---VLSGQDAFILWDTYGF 471
           E+++++  + EI+  EE SF KTL +G   F++ A   + K    L G D + L+DT+GF
Sbjct: 371 EIRRKQTDVMEILDEEEISFAKTLDRGERLFEEYALQAKQKGLGNLHGADVWRLYDTFGF 430

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR-GV 530
           P+DLTQLMAEERGL +D   F  A  +A+E S+  Q KQ    + +       L     V
Sbjct: 431 PVDLTQLMAEERGLTIDNAEFEEARLKAKEASK-GQGKQTADVVKLTVHDLGLLETMDNV 489

Query: 531 LATDDSFKFIWFQDHKSVIKAIYTGSEFIESV--VP-GNEVGIVLASSSFYAEQGGQIFD 587
             T+D  KF    +  S IKAIY   +F++S   +P G + GI+L  ++FYAEQGGQ  D
Sbjct: 490 PKTNDDAKF-GRGNITSQIKAIYHNKKFVDSTKDIPEGEQFGIILDRTNFYAEQGGQEND 548

Query: 588 EG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            G   I+G      V +VQ+YGG+++H G +  G+  F+V + VI + D  RR  I  NH
Sbjct: 549 TGKIIIDGK-AELAVEDVQVYGGYILHTGFMKYGS--FNVNDSVIAEYDELRRWPIRNNH 605

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           T TH+LNFALR+VLG+ V+QKGS+V  EKLRFDFSH   V    L +IE I  + I+   
Sbjct: 606 TGTHILNFALRQVLGEGVEQKGSLVAAEKLRFDFSHKSAVSDSDLEKIERISTDYIRQNC 665

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            V++K+  L+ A+ I+G+RAVFGE YPDPVRVV++G ++E++L +  +  W  IS E CG
Sbjct: 666 AVYAKDVPLSTAREISGVRAVFGETYPDPVRVVSVGVELEEILQNVHDPRWKDISIEFCG 725

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSL-------------- 811
           GTH+  T + +   +L E GIAKGIRRI AVT   A++    A                 
Sbjct: 726 GTHVQKTGDIKDLVILEENGIAKGIRRIIAVTGEEAHEVQRIAKEFGERLQRFDKMELGP 785

Query: 812 EKEVD------DASKIEGSLLEKNQVR----KAQKKVAE-----ENLQ--KAVKVATETA 854
           +KE++      D +++  S +EK + R    +  KKV E     + L+  KA+   T   
Sbjct: 786 QKEMEAKLLQVDLNQLTISAVEKVRFRERFTQIHKKVVEGQKAAQKLESKKALDAITGYF 845

Query: 855 EAAASNGKPFCISRVEVGLDAAAVREAVLKV-IEQKGMPVMVFSTDETTNKAVVCAGVPE 913
           E   +   P  + ++ +  +  AV +++  V  + +   V VF+ D+   K V    V +
Sbjct: 846 ETPENKDAPHLVLQLPISANPKAVSDSLNFVKTKMQNKSVYVFAADKGAGKVVHGCHVAQ 905

Query: 914 KSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEF 966
            S  ++    +EW       + GR G GK  +A G GT+A ++  A+  A E+
Sbjct: 906 -SLSAQGATPNEWANTVSSIVGGRAG-GKAPVAIGNGTEAEKLEDAIKAATEY 956


>gi|315046056|ref|XP_003172403.1| alanyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311342789|gb|EFR01992.1| alanyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 970

 Score =  827 bits (2136), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 463/937 (49%), Positives = 609/937 (64%), Gaps = 48/937 (5%)

Query: 42  ASAVAAMPGADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQ 101
           A++ ++ P A  + VEWPA +VRDTF  +F+   H    SS VVP++DPTLLFANAGMNQ
Sbjct: 2   AASTSSQPPAGQETVEWPALRVRDTFLDYFKKNGHTFVPSSSVVPLSDPTLLFANAGMNQ 61

Query: 102 YKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGD 161
           YK IFLGT DPN+  ++L RA N+QKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGD
Sbjct: 62  YKSIFLGTVDPNSDFAQLKRAHNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGD 121

Query: 162 YFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLP 220
           YFK EAI+++WELLTKVY L  DRLY TYF G+E AG+ PD EARDIW    +    +L 
Sbjct: 122 YFKKEAIQFSWELLTKVYGLDPDRLYVTYFEGNEAAGVGPDIEARDIWRSVGVKDDHILT 181

Query: 221 FGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDG 280
              KDNFWEMGD GPCGPCSEIHYDR G R+AA LVN DDP  +EIWN VFIQ+NRE D 
Sbjct: 182 GDMKDNFWEMGDQGPCGPCSEIHYDRIGGRNAAHLVNQDDPDVLEIWNNVFIQYNREPDR 241

Query: 281 SLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDA 340
           SL+PLP +HVDTGLG+ERL SILQNK SNYDTDVF P+F AIQ  TGARPY+G  GA D 
Sbjct: 242 SLRPLPNQHVDTGLGYERLVSILQNKSSNYDTDVFSPLFAAIQNITGARPYTGNFGAQDV 301

Query: 341 DKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFN 399
           D +D AYRVVADH+RTL+FAI DG+ P NEGR YV+RR+LRR VRY  + ++ + G FF+
Sbjct: 302 DGIDTAYRVVADHLRTLTFAITDGAAPNNEGRGYVVRRVLRRGVRYARKYMQVEIGSFFS 361

Query: 400 GLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQ---DVQGKV 456
            LV  +V+ MGD+FPE+K+++  + EI+  EE SF KTL +G  +F+  AQ   D     
Sbjct: 362 KLVPALVEQMGDMFPEIKRKQNDVMEILDEEEVSFAKTLDRGERQFETYAQQALDSGAGK 421

Query: 457 LSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIV 516
           L G D + L+DT+GFP+DLT+LMAEER L +D   F  A  +A+E S+  Q K A   + 
Sbjct: 422 LHGADVWRLYDTFGFPVDLTRLMAEERQLTIDDAEFEEARLKAKEASK-GQAKAASDLLK 480

Query: 517 MDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESV--VPGNE-VGIVLA 573
           +     + L K GV  T+D  KF    +  + IKAI  G E I+S   +P +E +GI+L 
Sbjct: 481 LTVHTLSTLEKNGVPKTNDDAKF-GKGNIVANIKAICHGKEVIDSTKDIPADEQIGIILD 539

Query: 574 SSSFYAEQGGQIFDEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVIC 631
            ++FYAEQGGQ +D G   I+G      V+NVQ+YGG+V+H G +    G FSV + VI 
Sbjct: 540 KTNFYAEQGGQEYDTGKIVIDGQ-AELDVQNVQMYGGYVLHTGFIK--YGNFSVNDSVIA 596

Query: 632 KVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLR 691
           + D  RR  I  NHT TH+LNFALREVLGD +DQKGS+V  EKLRFDFSH   +    L 
Sbjct: 597 EYDELRRWPIRNNHTGTHILNFALREVLGDGIDQKGSLVAAEKLRFDFSHKSAISDSDLE 656

Query: 692 RIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADP 751
           +IES+  + I+    V+S+E  L+ A+ I G+RAVFGE YPDPVRVV++G +++++L + 
Sbjct: 657 KIESMSTDYIRQNCAVYSQEVPLSTAREITGVRAVFGETYPDPVRVVSVGVELDEILKNV 716

Query: 752 ENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSL 811
           ++  W ++S E CGGTH+  T + +   +L E GIAKGIRRI AVT   A++    A   
Sbjct: 717 KDPRWEAVSIEFCGGTHVQKTGDIKDLVILEESGIAKGIRRIIAVTGEDAHEVQRVAREF 776

Query: 812 EKEVD--------------------DASKIEGSLLEK----NQVRKAQKKV--AEENLQK 845
            + ++                    D +++  S +EK    NQ  +  KK+  A++  QK
Sbjct: 777 GERLNRFEKMSAGPERDAEIKSLQVDLNQLTISAVEKTKYRNQFTQIHKKITDAQKAAQK 836

Query: 846 A-VKVATETAEAAASNGK--PFCISRVEVGLDAAAVREAVLKV-IEQKGMPVMVFSTDET 901
           A VK A +T        K  P  + ++ +  +  A+ E++  V  +  G  + VF+ D  
Sbjct: 837 AEVKTAIDTISTYFEENKDSPSLVIKLPISANQKAISESLTHVKTKLSGKALYVFAAD-G 895

Query: 902 TNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRC 938
           +  A  C   P+ +  +K    +EW +A    + G+ 
Sbjct: 896 SKVAHGCYVTPDLT--TKGASANEWASAVSSIVGGKA 930


>gi|342320045|gb|EGU11988.1| Hypothetical Protein RTG_01868 [Rhodotorula glutinis ATCC 204091]
          Length = 957

 Score =  825 bits (2132), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 433/801 (54%), Positives = 534/801 (66%), Gaps = 22/801 (2%)

Query: 48  MPGADPQVVEWPATKVRDTFFKFFEDKN-HVNWKSSPVVPVNDPTLLFANAGMNQYKPIF 106
           M     Q  +WPATKVR TF  +F ++N H   KSS  +P  DPTLLFANAGMNQYK IF
Sbjct: 1   MSATASQFGDWPATKVRQTFLDYFTEQNGHSFVKSSSTIPYEDPTLLFANAGMNQYKSIF 60

Query: 107 LGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNE 166
           LGT DP++  SKL RA N+QKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK E
Sbjct: 61  LGTVDPSSPFSKLKRAANSQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKE 120

Query: 167 AIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKD 225
           A   AW LLT+VY LP  RLY TYF G    GL  D E +++WL   +P   ++P   KD
Sbjct: 121 ATAMAWNLLTQVYGLPPSRLYVTYFEGG--FGLPADLETKNLWLALGVPEDHIIPGNAKD 178

Query: 226 NFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPL 285
           NFWEMG TGPCGPC+EIHYDR G R+AASLVN DDP  +E+WN+VFIQ+NRE+D SL+ L
Sbjct: 179 NFWEMGATGPCGPCTEIHYDRIGGRNAASLVNMDDPDVLEVWNVVFIQYNREADSSLREL 238

Query: 286 PAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDM 345
           PAKHVDTG+GFERL S+LQ+K SNYDTDVF P+FD IQQ T AR Y GK+G DD D +D 
Sbjct: 239 PAKHVDTGMGFERLVSVLQDKRSNYDTDVFRPLFDKIQQLTNARAYEGKLGKDDVDGIDT 298

Query: 346 AYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNI 404
           AYRVVADH+RTL+FAI DG  P N GR YVLRR+LRR  RY  +      G FF+ LV  
Sbjct: 299 AYRVVADHVRTLTFAICDGGVPSNVGRGYVLRRVLRRGARYVRKKFGVPIGSFFSSLVPT 358

Query: 405 VVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ---GKVLSGQD 461
           +V+ MG  FPE+  +   ++EI+  EE SF +TL +G + F+   Q  +      L G D
Sbjct: 359 LVEQMGGFFPEITGKFEDLKEILDEEEESFARTLDRGEKLFESYVQQAKKEGSNTLRGAD 418

Query: 462 AFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADA 521
            + L+DTYGFP+DLT LMAEE GL +D   F  A + ++E S+ A  K  G A+ +D   
Sbjct: 419 VWRLYDTYGFPVDLTLLMAEEAGLSIDQAAFEAAQEASKEASKGAGKKGDGQAVRLDVHD 478

Query: 522 TAALHKRG-VLATDDSFKFIWFQDHKSVIKAIYTGSEFIESV-----VPGNEVGIVLASS 575
            AAL     V  T+D  K+    +  SV+KAIY   +F+ S          ++GIVL  +
Sbjct: 479 IAALEANADVPKTNDEAKY-GTGNVDSVVKAIYRQGKFVASTEELEDAQQVQLGIVLDRT 537

Query: 576 SFYAEQGGQIFDEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKV 633
           +FYAE GGQ +D G   I+G    F V +VQ++ G+V+HIG + EGA    VG++V+   
Sbjct: 538 NFYAESGGQEYDTGRIVIDGQ-ADFVVEDVQVFNGYVLHIGRVVEGA--LKVGDKVVSSY 594

Query: 634 DYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRI 693
           D  RR  +  NHT TH+LN+ LREVLGDHVDQKGS+V P KLRFDFSH  P+    L RI
Sbjct: 595 DELRRWPLRNNHTGTHILNYCLREVLGDHVDQKGSLVAPSKLRFDFSHKSPIPTAELDRI 654

Query: 694 ESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPEN 753
           E + NE IK  + VFSKE  L+ A+ I GLRAVFGE YPDPVRVV +   +E++ AD EN
Sbjct: 655 EDMSNEWIKRNVKVFSKEMDLSTAQKIPGLRAVFGEAYPDPVRVVTLEFSLEEIQADIEN 714

Query: 754 KEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEK 813
            +W S S E CGGTH+  T E + F +  E GIAKGIRRI A+T   A KA + A   E 
Sbjct: 715 PKWRSTSVEFCGGTHVQKTGEIKEFVITEESGIAKGIRRIIAITGEDARKASQLANDSEA 774

Query: 814 EVDDASKIEGSLLEKNQVRKA 834
             +   K++  L+EK +  KA
Sbjct: 775 RFEQIIKLD--LVEKEKQLKA 793


>gi|115490933|ref|XP_001210094.1| alanyl-tRNA synthetase [Aspergillus terreus NIH2624]
 gi|114196954|gb|EAU38654.1| alanyl-tRNA synthetase [Aspergillus terreus NIH2624]
          Length = 968

 Score =  825 bits (2131), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 458/965 (47%), Positives = 602/965 (62%), Gaps = 67/965 (6%)

Query: 57  EWPATKVRDTFFKFFEDKNHV------------NWKSSPVVPVNDPTLLFANAGMNQYKP 104
           EW A +VRDTF  +F+   H             ++ SSPVVP+ DPTLLF NAGMNQ+K 
Sbjct: 10  EWTAKRVRDTFLDYFKKNGHTFGIATVARSILPSFASSPVVPLADPTLLFTNAGMNQFKS 69

Query: 105 IFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK 164
           IFLGT DPN+  + L  AC     IRAGGKHNDLDDVGKD YHHTFFEMLGNWSFGDYFK
Sbjct: 70  IFLGTVDPNSDFATLKSAC-----IRAGGKHNDLDDVGKDGYHHTFFEMLGNWSFGDYFK 124

Query: 165 NEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGC 223
            EAI ++WELLT VY L   RLY TYF G ++ GL PD EA+++W    +P   +LP   
Sbjct: 125 KEAIRYSWELLTTVYGLDPQRLYVTYFEGHKEGGLEPDLEAKELWKAVGVPDDHILPGNM 184

Query: 224 KDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLK 283
           KDNFWEMGD GPCGPCSE+HYDR G R+AA LVN DDP  +EIWN VFIQ+NRE+D SL+
Sbjct: 185 KDNFWEMGDQGPCGPCSEVHYDRIGGRNAAHLVNMDDPNVLEIWNNVFIQYNREADRSLR 244

Query: 284 PLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKV 343
           PLP KH+DTGLGFERL SILQ+K SNYDTDVF P+FDAI+  TGAR Y G+ GADD D +
Sbjct: 245 PLPNKHIDTGLGFERLVSILQDKSSNYDTDVFTPLFDAIRDITGAREYQGRFGADDVDGI 304

Query: 344 DMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLV 402
           D AYRVVADHIRTL FAI+DG  P N+GR YV+RR+LRR  RY  +  + + G FF+ LV
Sbjct: 305 DTAYRVVADHIRTLMFAISDGVMPNNDGRGYVIRRVLRRGARYARKYFQVEIGSFFSKLV 364

Query: 403 NIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK---VLSG 459
             VV  +GD+FPELK+++  + EI+  EE SF KTL +G  +F++ AQ  + K    L G
Sbjct: 365 PTVVDQLGDMFPELKKKQHDVMEILDEEEISFSKTLDRGERQFEQYAQKSKTKGDDKLHG 424

Query: 460 QDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDA 519
            D + L+DT+GFP+DLT+LMAEERGL +D   F  A   A+E S+  Q K A  A+ +D 
Sbjct: 425 ADVWRLYDTFGFPVDLTRLMAEERGLRIDDLEFEEARLRAKEASK-GQKKAAADAVKLDV 483

Query: 520 DATAALHK-RGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIES---VVPGNEVGIVLASS 575
                L K   V  TDDS KF   ++  + +KAIY G  F  S   +  G ++GI+L  +
Sbjct: 484 HDLGKLEKMEDVHKTDDSAKF-GRENITAQVKAIYHGKSFCTSTSEITAGEQLGIILDRT 542

Query: 576 SFYAEQGGQIFDEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKV 633
           +FYAEQGGQ  D G   I+G      V +VQ+YGG+V+H G +  G+  FSVG+ VIC+ 
Sbjct: 543 NFYAEQGGQENDTGRIVIDGQ-AELEVGDVQLYGGYVLHTGFMKYGS--FSVGDSVICEY 599

Query: 634 DYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRI 693
           D  RR  I  NHT TH+LNFALREVLGD ++QKGS+V  EKLRFDFSH  P+    L+++
Sbjct: 600 DELRRWPIRNNHTGTHILNFALREVLGDGIEQKGSLVAAEKLRFDFSHKSPLTDAELQKV 659

Query: 694 ESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPEN 753
           E I  E I+    V+S+E  LA A+ I+G+RAVFGE YPDPVRVV++G ++E++L +  +
Sbjct: 660 EDISTEYIRQNCAVYSQELPLATAREISGVRAVFGETYPDPVRVVSVGVELEEILKNVSD 719

Query: 754 KEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEK 813
             W  +S E CGGTH+  T + +   +L E GIAKGIRRI AVT   A++    A   EK
Sbjct: 720 PRWEKVSIEFCGGTHVQKTGDIKDLVVLEESGIAKGIRRIIAVTGEEAHEVQRLAADFEK 779

Query: 814 EV-------------DDASKIEGSL-------LEKNQVRK-----------AQKKVAEEN 842
            +              +A +I+  L       ++K++ R+           AQK   +  
Sbjct: 780 RLASLETMPLGSEKEQEAKQIQVELNSLIVSAVQKSKFRERFARINKQIVDAQKAQQKLE 839

Query: 843 LQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETT 902
            +KA+         A++ GK + ++++ +  ++ A+ EA+  V + K     V+      
Sbjct: 840 SKKALDTINSYFADASNEGKSWLVAKLPISANSKAISEAINHV-KSKMQDKSVYVLAADA 898

Query: 903 NKAVVCAGV-PEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMD 961
               V  G    K+   +    SEW T  +    G    GKG  + G G +  +V  A++
Sbjct: 899 AAGRVAHGCYVSKAATEQGASASEWAT-VVSGAIGGKAGGKGPTSIGNGVNPDKVDEAVE 957

Query: 962 LAAEF 966
           LA ++
Sbjct: 958 LATDY 962


>gi|408389623|gb|EKJ69061.1| hypothetical protein FPSE_10760 [Fusarium pseudograminearum CS3096]
          Length = 957

 Score =  825 bits (2131), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 444/957 (46%), Positives = 601/957 (62%), Gaps = 46/957 (4%)

Query: 56  VEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQ 115
           ++WPA +VR TFF++FE + H    SS VVP NDPTLLF NAGMNQ+KPIFLGT      
Sbjct: 6   LKWPAARVRKTFFEYFEQRGHTIVPSSSVVPHNDPTLLFTNAGMNQFKPIFLGTVGKTDP 65

Query: 116 LSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELL 175
           ++ L  A ++QKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK EAI ++WELL
Sbjct: 66  MASLKAAVDSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAISYSWELL 125

Query: 176 TKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTG 234
           TKVY L   RLY TYF GDEK  L PD EA+++W+   +P   +LP   KDNFWEMGD G
Sbjct: 126 TKVYGLDPSRLYVTYFEGDEKLKLEPDLEAKELWISVGVPEDHILPGNMKDNFWEMGDQG 185

Query: 235 PCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           PCGPCSEIHYD+ G R+A+SLVN DDP  +E+WN VF+Q++R+ DGSLK LPAKH+DTG+
Sbjct: 186 PCGPCSEIHYDKVGGRNASSLVNMDDPMVVEVWNNVFMQYDRQKDGSLKSLPAKHIDTGM 245

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           G+ERL S LQ+ +SNY TD F P+F  IQ+ TGARPY+ K G DDAD VD AYRVVADHI
Sbjct: 246 GYERLVSALQDTVSNYATDCFTPLFQKIQEVTGARPYTDKYGKDDADGVDTAYRVVADHI 305

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVF 413
           RTLSF+IADG+ P N+GR YV+RR+LRR VRY  +   A  G FF+ ++  +V  MG+ F
Sbjct: 306 RTLSFSIADGAVPNNDGRGYVIRRVLRRGVRYARKYFNADIGAFFSKILPALVDQMGEQF 365

Query: 414 PELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ---GKVLSGQDAFILWDTYG 470
           PEL +++  I+EI+  EE +F KTL +G  +F+K A +      K L G   + L+DT+G
Sbjct: 366 PELVKKQQDIKEILDEEEVAFAKTLDRGEAQFEKYAAEATKNGAKKLQGDVVWRLYDTFG 425

Query: 471 FPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR-G 529
           FP+DLT+LMAEER L +D E    A D+ARE S++ +      A  ++    + L K   
Sbjct: 426 FPVDLTRLMAEERNLEIDDEEVKAAQDKAREASKAVKESVQTFA-KLNVHQISELEKDLK 484

Query: 530 VLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNE---VGIVLASSSFYAEQGGQIF 586
           V  T+D  KF+   D  + ++ IY G+ F++S    +E   +G+++  ++FYAE GGQ+ 
Sbjct: 485 VERTNDDAKFL-LGDSNAQVQLIYDGTSFLKSTKDVSEKTALGLLIDKTNFYAESGGQVA 543

Query: 587 DEG-FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
           D G  +      F V +VQ YGG+++H G +  G    S G++VIC+ D  RR  I  NH
Sbjct: 544 DTGRIVIDDVAEFKVLDVQNYGGYILHNGYIEYGT--LSSGDKVICEYDELRRSPIRNNH 601

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+LN +LREVLGD V+QKGS+V  +KLRFDFSH   V  E L++IE + NE I+   
Sbjct: 602 SGTHILNHSLREVLGDEVNQKGSLVDSDKLRFDFSHKTGVKIEELKKIEEMSNEYIRRGQ 661

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            ++SKE  L +A+ I G RAVFGE YPDPVRVV+IG+ ++++LADP+  EW   S E CG
Sbjct: 662 KIYSKEVDLEKARQIEGCRAVFGETYPDPVRVVSIGKDIDEMLADPKKPEWRQYSVEFCG 721

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVD--------- 816
           GTH+  T   +   L+ E GIAKGIRRI A T   A++    A    K++D         
Sbjct: 722 GTHVEQTGLIKDLILIEESGIAKGIRRIIAYTGEAAHQVQREADEFSKKIDALDQLPLGP 781

Query: 817 -----------DASKIEGSLLEKNQVRKAQKKV------AEENLQKA-VKVATETAEAAA 858
                      + S++  S L K+   K  +K+       ++  QKA  K A +T +   
Sbjct: 782 EKETQMKAVSVELSQLTISTLTKDDFNKRYQKINAAVTAEQKKRQKAESKTALDTVKKHF 841

Query: 859 SNGK--PFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSD 916
              K   + + R+ VG  + A+ E V+K  + K     V+    +  +  V  GV   + 
Sbjct: 842 DTNKDAKWFVGRLPVGATSKALME-VVKHYQGKDKEKTVYVFGGSKEEGAVAHGVYVGTH 900

Query: 917 QSKQ-LEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKLR 972
            + Q +   +W  +  + + GR G GK     GQGT    +   ++ A ++   KL+
Sbjct: 901 LASQGVTAEQWAASVSEVIGGRSG-GKEPTRQGQGTKPENLDEGVETATKWLDEKLK 956


>gi|156371401|ref|XP_001628752.1| predicted protein [Nematostella vectensis]
 gi|156215737|gb|EDO36689.1| predicted protein [Nematostella vectensis]
          Length = 961

 Score =  825 bits (2130), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 470/966 (48%), Positives = 607/966 (62%), Gaps = 65/966 (6%)

Query: 60  ATKVRDTFFKFF-EDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSK 118
           A  +R  F  FF E  NH    SS V+P  DPTLLFANAGMNQYK IFLGT DPN+ +SK
Sbjct: 7   AKDIRRKFIDFFVEKHNHTFVPSSSVIPHEDPTLLFANAGMNQYKSIFLGTVDPNSDMSK 66

Query: 119 LTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKV 178
           L RA N+QKCIRAGGKHNDL+DVGKD YHHTFFEMLGNWSFGD+FK  AI++AWE LT+V
Sbjct: 67  LKRAVNSQKCIRAGGKHNDLEDVGKDVYHHTFFEMLGNWSFGDFFKKGAIDFAWEFLTEV 126

Query: 179 YRLPADRLYATYFGGDEKAGLAPDNEARDIWL-KFLPASRVLPFGCKDNFWEMGDTGPCG 237
            ++P +RLY TYFGG +  G+  DNE +D W+ K L  SRVLPFG  DNFWEMGDTGPCG
Sbjct: 127 LKVPKERLYVTYFGGCD--GVECDNETKDYWIGKGLDPSRVLPFGMSDNFWEMGDTGPCG 184

Query: 238 PCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFE 297
           PCSEIHYDR G RDA +LVN DDPT +EIWN+VFIQFNRE+DG+LK LP++HVDTG+G E
Sbjct: 185 PCSEIHYDRIGGRDAKALVNMDDPTVLEIWNLVFIQFNRENDGTLKTLPSQHVDTGMGLE 244

Query: 298 RLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTL 357
           RL SI+Q KMSNYDTD+F P FD I QATG +PY G+VG  D + +DMAYRVVADHIRTL
Sbjct: 245 RLVSIIQGKMSNYDTDLFTPFFDKIHQATGVQPYGGQVGLADQNGIDMAYRVVADHIRTL 304

Query: 358 SFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELK 417
           + A++DG  P N GR YVLRRILRR +RY  E L A  GF   LV++V+  +G+ FPEL 
Sbjct: 305 TVAMSDGGKPDNVGRGYVLRRILRRCIRYSIEKLNASPGFTASLVSVVIDTLGEFFPELN 364

Query: 418 QREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQ 477
           +    + ++I  EE  F KTL +G   F++ A  +    + G  A+ L+DTYGFP+DLT+
Sbjct: 365 KDPQQVMDVINEEEVQFLKTLARGRRLFERTASKITDGTIPGDVAWRLYDTYGFPVDLTE 424

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLA----- 532
           LMAEERGL VD+E +  A   A+E +R  ++  +  AI +D      L     L      
Sbjct: 425 LMAEERGLRVDMEKYEEAKRRAQEIAR-GKDSASDDAITLDVHLLDKLQNVMNLPPTIDL 483

Query: 533 -----TDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFD 587
                + D+     FQ     IKA+    EF+  V  G   GI+L  +SFYAEQGGQI+D
Sbjct: 484 PKYSYSSDALGSYVFQPVSGTIKALLHEKEFVNEVPGGEHCGIILDQTSFYAEQGGQIYD 543

Query: 588 EGFI--EGLFG-SFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           EGF+  EG     F V NVQ++GG+V+H+G+L EGA R  VG+ + C +D DRR+    N
Sbjct: 544 EGFMTKEGDEDVEFRVINVQVHGGYVLHVGAL-EGAIR--VGDTMNCLIDEDRRRQCMNN 600

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           HT TH+LNFALR  LG+  DQ+GS+V P +LRFDF+    + PE ++  E    E + ++
Sbjct: 601 HTATHILNFALRRTLGE-ADQRGSLVAPNRLRFDFTAKGAMTPEQVKSTELFSKEIVTSD 659

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
           L VF+KE  LA+AK + GLRA+F EVYPDPVRVV+IG   ++L  +P+     SI  E C
Sbjct: 660 LPVFAKEVALAQAKDVQGLRAIFDEVYPDPVRVVSIGASFDELQPNPQAGYKYSI--EFC 717

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLE-------KEVDD 817
           GGTHL  +   E F L+SEE I+KGIRRI A+T     KA +   +LE       KEV+ 
Sbjct: 718 GGTHLQRSSHMETFVLVSEEAISKGIRRIVALTGPEGLKAEKHCEALEARVEKIRKEVEA 777

Query: 818 ASK--------------IEG------SLLEKNQVRKAQKKVAE--ENLQKAVKVATETAE 855
            SK              IE       S  +K ++R+  KKV +  +N  KA++ A  T+ 
Sbjct: 778 ESKNLRVKEAGQEITRLIEDINAAVISAWKKEEMRQTLKKVKKIVDNASKAMQAALMTSA 837

Query: 856 A----AASNGKPFCISRVEVGLDAAAVREAVLKVIEQ-KGMP----VMVFSTDETTNKAV 906
           A    A    +P     VE+  DA + ++ +   ++Q K +     V++ S D+  NK +
Sbjct: 838 ADKAKAMITAEPDRTVVVEL-FDAGSNQKVLDAAMKQFKNLSPLTAVLLLSVDQ-ENKKI 895

Query: 907 VCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEF 966
           +C     K    K L+  EW  A    L G+ G GK   A   G +   +  A+  A +F
Sbjct: 896 ICLSQVPKDVTKKGLKADEWTGAIADILGGKSG-GKEMSAQASGPNVGSIDKALSEAKQF 954

Query: 967 AAMKLR 972
           A MKL+
Sbjct: 955 ANMKLQ 960


>gi|291229512|ref|XP_002734712.1| PREDICTED: alanyl-tRNA synthetase-like [Saccoglossus kowalevskii]
          Length = 974

 Score =  825 bits (2130), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 461/975 (47%), Positives = 607/975 (62%), Gaps = 73/975 (7%)

Query: 63  VRDTFFKFFEDKN---HVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           +R  F  FF +K    H    S+ VVP++DPTLLF NAGMNQ+KPIF G  DPN+ ++K 
Sbjct: 8   IRQGFIDFFRNKKGLEHEFVPSNSVVPLDDPTLLFTNAGMNQFKPIFQGVVDPNSDMAKW 67

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  N+QKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFGDYFK E  E AWELLT V+
Sbjct: 68  VRVANSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKEVCEMAWELLTDVW 127

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
           +LP +RLY TYFGGDEK GL PD E + IW+   LP  RVLPF  +DNFWEMGD GPCGP
Sbjct: 128 KLPKERLYVTYFGGDEKMGLGPDEECKQIWIDIGLPPERVLPFSMRDNFWEMGDVGPCGP 187

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIH+DR G RDA  LVN DDP  +E+WN+VF+QFNRE DGS++PLP K++D G+G ER
Sbjct: 188 CSEIHFDRIGGRDATHLVNMDDPNVLELWNLVFMQFNREPDGSIRPLPKKNIDCGMGLER 247

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           + S+LQ KMSNYDTD+F P FDAI + TG R Y GKVG++D D +DMAYRVVADHIRTL+
Sbjct: 248 VISVLQGKMSNYDTDIFTPFFDAIHKGTGVREYQGKVGSEDTDGIDMAYRVVADHIRTLT 307

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            AI+DG  P N GR YVLRR+LRR VRY +E L A  GFF  LV +V+  +GD FP +K+
Sbjct: 308 IAISDGGRPDNVGRGYVLRRVLRRGVRYATEKLNAPSGFFASLVQVVLDTLGDAFPGIKK 367

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQL 478
               + +II  EEA F KTL +G    ++    ++ KVL G+ A++L+DTYGFP+DLTQL
Sbjct: 368 DPQLVIDIINEEEAQFLKTLNRGHRVLQRTINKLETKVLPGKAAWLLYDTYGFPVDLTQL 427

Query: 479 MAEERGLLVDIEGFNNAMDEARERSRSAQNKQAG--GAIVMDADATAALH-KRGVLATDD 535
           MAEE GL +D+ G      + + R   +Q K +G    I +D  A + L   R V ATDD
Sbjct: 428 MAEENGLNIDM-GEYEEEKKKKLRFLLSQGKGSGVDDTIGLDVHAISELQDTRKVSATDD 486

Query: 536 SFKFIWFQDHK----------SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
           S K+ +  D +          + + A+    +F+  V  G+E G++L  + FYAEQGGQI
Sbjct: 487 SPKYSYTYDEQNSKYVFNAIVATVIALRKDKQFVSEVDNGDECGMLLDKTCFYAEQGGQI 546

Query: 586 FDEGFIEGLFG---SFYVRNVQIYGGFVIHIGSLT--EGAGRFSVGEEVICKVDYDRRKL 640
           +DEGF+E        F V NVQ+ GG+++HIG L+  +  G+  VG+++   +D  RR+ 
Sbjct: 547 WDEGFMEKENNPDIEFKVTNVQVKGGYILHIGKLSAVDSEGKLKVGDKMKLYIDEARRRP 606

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           I  NHT THMLN+ALR+VLG+  DQKGS+V P+KLRFDF+    +  E ++  E I NE 
Sbjct: 607 IMSNHTGTHMLNYALRKVLGE-ADQKGSLVAPDKLRFDFTAKGAMTTEQVQSAEQITNEM 665

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           ++    V++K + LA AK I GLRAVF EVYPDPVRV++IG  VED+ ADP      + S
Sbjct: 666 VQKSQPVYAKNSPLAVAKAIQGLRAVFDEVYPDPVRVISIGIPVEDMEADPSGPAGATTS 725

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDAS- 819
            E CGGTHL N+     F +++EE IAKGIRRI A+T   A KA   A  LE+E+D  + 
Sbjct: 726 IEFCGGTHLLNSGHIGPFVIVTEEAIAKGIRRIVAITGDDAQKAINRADMLEEEIDKLTQ 785

Query: 820 KIEGSLLE----------------------------KNQVRKAQKKVAE--ENLQKAVKV 849
           KI+ +  +                            K+ +RK  K + +  ++L KA K 
Sbjct: 786 KIKDNSTKQVYMPKELSKEIVSIGDDLNVAIVPQWRKDGMRKKLKDLKKIMDDLDKARKA 845

Query: 850 A--------TETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMP----VMVFS 897
           A        T+       N +P  +  ++   ++ A+ +A LK  E + +      M+FS
Sbjct: 846 AIIQNVKEMTKKLIEEKPN-QPLVVMTLDADSNSKAL-DAALK--EYRNLSPQTAAMLFS 901

Query: 898 TDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVT 957
            D    K +    VP++   +K L+  EW+      L G+ G GK   A   G +   + 
Sbjct: 902 VDRENRKIICLCHVPQEG-IAKGLKAGEWVRHVSSSLNGKGG-GKDSSAQASGDNINGLD 959

Query: 958 PAMDLAAEFAAMKLR 972
            A  LA EFA +KL+
Sbjct: 960 EASKLAKEFAELKLK 974


>gi|46108048|ref|XP_381082.1| hypothetical protein FG00906.1 [Gibberella zeae PH-1]
          Length = 957

 Score =  824 bits (2129), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 445/957 (46%), Positives = 601/957 (62%), Gaps = 46/957 (4%)

Query: 56  VEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQ 115
           ++WPA +VR TFF++FE + H    SS VVP NDPTLLF NAGMNQ+KPIFLGT      
Sbjct: 6   LKWPAARVRKTFFEYFEQRGHTIVPSSSVVPHNDPTLLFTNAGMNQFKPIFLGTVGKTDP 65

Query: 116 LSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELL 175
           ++ L  A ++QKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK EAI ++WELL
Sbjct: 66  MASLKAAVDSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAISYSWELL 125

Query: 176 TKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTG 234
           TKVY L   RLY TYF GDEK  L PD EA+++W+   +P   +LP   KDNFWEMGD G
Sbjct: 126 TKVYGLDPSRLYVTYFEGDEKLKLEPDLEAKELWISVGVPEDHILPGNMKDNFWEMGDQG 185

Query: 235 PCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           PCGPCSEIHYD+ G R+A+SLVN DDP  +E+WN VF+Q++R+ DGSLK LPAKH+DTG+
Sbjct: 186 PCGPCSEIHYDKVGGRNASSLVNMDDPMVVEVWNNVFMQYDRQKDGSLKSLPAKHIDTGM 245

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           G+ERL S LQ+ +SNY TD F P+F  IQ+ TGARPY+ K G DDAD +D AYRVVADHI
Sbjct: 246 GYERLVSALQDTVSNYATDCFTPLFQKIQEVTGARPYTDKYGKDDADGIDTAYRVVADHI 305

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVF 413
           RTLSF+IADG+ P N+GR YV+RR+LRR VRY  +   A  G FF+ ++  +V  MG+ F
Sbjct: 306 RTLSFSIADGAVPNNDGRGYVIRRVLRRGVRYARKYFNADIGAFFSKILPALVDQMGEQF 365

Query: 414 PELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ---GKVLSGQDAFILWDTYG 470
           PEL +++  I+EI+  EE +F KTL +G  +F+K A +      K L G   + L+DT+G
Sbjct: 366 PELVKKQQDIKEILDEEEVAFAKTLDRGEAQFEKYAAEATKNGAKKLQGDVVWRLYDTFG 425

Query: 471 FPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR-G 529
           FP+DLT+LMAEER L +D E    A D+ARE S++ +      A  ++    + L K   
Sbjct: 426 FPVDLTRLMAEERNLEIDDEEVKAAQDKAREASKAVKESVQTFA-KLNVHQISELEKDLK 484

Query: 530 VLATDDSFKFIWFQDHKSVIKAIYTGSEFIESV--VP-GNEVGIVLASSSFYAEQGGQIF 586
           V  T+D  KF+   D  + ++ IY G+ F++S   VP    +G+++  ++FYAE GGQ+ 
Sbjct: 485 VERTNDDAKFL-LGDSNAQVQLIYDGTSFLKSTKDVPEKTALGLLIDKTNFYAESGGQVA 543

Query: 587 DEG-FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
           D G  +      F V +VQ YGG+V+H G +  G    S G++VIC+ D  RR  I  NH
Sbjct: 544 DTGRIVIDDVAEFKVLDVQNYGGYVLHNGYIEYGT--LSSGDKVICEYDELRRSPIRNNH 601

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+LN +LREVLGD V+QKGS+V  +KLRFDFSH   V  E L++IE + NE I+   
Sbjct: 602 SGTHILNHSLREVLGDEVNQKGSLVDSDKLRFDFSHKTGVKIEELKKIEEMSNEYIRRGQ 661

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            ++SKE  L +A+ I G RAVFGE YPDPVRVV+IG+ ++++LADP+  EW   S E CG
Sbjct: 662 KIYSKEVDLEKARQIEGCRAVFGETYPDPVRVVSIGKDIDEMLADPKKPEWRQYSVEFCG 721

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVD--------- 816
           GTH+  T   +   L+ E GIAKGIRRI A T   A++    A    K++D         
Sbjct: 722 GTHVEQTGLIKDLILIEESGIAKGIRRIIAYTGEAAHQVQREADEFSKKIDALDQLPLGP 781

Query: 817 -----------DASKIEGSLLEKNQVRKAQKKV------AEENLQKA-VKVATETAEAAA 858
                      + S++  S L K+   K  +K+       ++  QKA  K A +T +   
Sbjct: 782 EKEAQMKAVSVELSQLTISTLTKDDFNKRYQKINAAVTAEQKKRQKAESKTALDTVKKHF 841

Query: 859 SNGK--PFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSD 916
              K   + + R+ VG  + A+ E V+K  + K     V+    +  +  V  GV   + 
Sbjct: 842 DTNKDAKWFVGRLPVGATSKALME-VVKHYQGKDKEKTVYVFGGSKEEGAVAHGVYVGTH 900

Query: 917 QSKQ-LEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKLR 972
            + Q +   +W  +  + + GR G GK     GQGT    +   ++ A ++   KL+
Sbjct: 901 LASQGVTAEQWAASVSEVIGGRSG-GKEPTRQGQGTKPENLDEGVETATKWLDEKLK 956


>gi|302506663|ref|XP_003015288.1| hypothetical protein ARB_06411 [Arthroderma benhamiae CBS 112371]
 gi|291178860|gb|EFE34648.1| hypothetical protein ARB_06411 [Arthroderma benhamiae CBS 112371]
          Length = 954

 Score =  823 bits (2127), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 471/965 (48%), Positives = 619/965 (64%), Gaps = 58/965 (6%)

Query: 42  ASAVAAMPGADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQ 101
           A++ ++ P A  Q VEWPA +VRDTF  +F+   H    SS VVP++DPTLLFANAGMNQ
Sbjct: 2   AASTSSQPPAGQQTVEWPALRVRDTFLDYFKKNGHTFVPSSSVVPLSDPTLLFANAGMNQ 61

Query: 102 YKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGD 161
           YK IFLGT DPN+  ++L RA N+QK         DLDDVGKD+YHHTFFEMLGNWSFGD
Sbjct: 62  YKSIFLGTVDPNSDFAQLKRAHNSQK---------DLDDVGKDSYHHTFFEMLGNWSFGD 112

Query: 162 YFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLP 220
           YFK EAI+++WELLTKVY L  DRLY TYF G+E AG+ PD EARDIW    +    +L 
Sbjct: 113 YFKKEAIQFSWELLTKVYGLDPDRLYVTYFEGNEAAGVGPDIEARDIWRSVGVKDDHILT 172

Query: 221 FGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDG 280
              KDNFWEMGD GPCGPCSEIHYDR G R+AA LVN DDP  +EIWN VFIQ+NRE D 
Sbjct: 173 GDMKDNFWEMGDQGPCGPCSEIHYDRIGGRNAAHLVNQDDPDVLEIWNNVFIQYNREPDR 232

Query: 281 SLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDA 340
           SL+PLP +HVDTGLG+ERL SILQNK SNYDTDVF P+F+AIQ  TGARPY+GK GA+DA
Sbjct: 233 SLRPLPNQHVDTGLGYERLVSILQNKSSNYDTDVFTPLFNAIQNITGARPYTGKFGAEDA 292

Query: 341 DKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFN 399
           D +D AYRVVADH+RTL+FAI DG+ P NEGR YV+RR+LRR VRY  + L+ + G FF+
Sbjct: 293 DGIDTAYRVVADHLRTLTFAITDGAAPNNEGRGYVVRRVLRRGVRYARKYLQVEIGSFFS 352

Query: 400 GLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQ---DVQGKV 456
            LV  +V+ MGD+FPE+K+++  + EI+  EE SF KTL +G  +F+  AQ   D     
Sbjct: 353 KLVPALVEQMGDMFPEIKRKQTDVMEILDEEEVSFAKTLDRGERQFENYAQQALDSGAGK 412

Query: 457 LSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIV 516
           L G D + L+DT+GFP+DLT+LMAEER L +D   F  A  +A+E S+  Q K A   + 
Sbjct: 413 LHGADVWRLYDTFGFPVDLTRLMAEERQLTIDDAEFEEARLKAKEASK-GQAKTASDLLK 471

Query: 517 MDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESV--VPGNE-VGIVLA 573
           +     + L K GV  TDD  KF    +  + IKAI  G E I+S   +P NE +GI+L 
Sbjct: 472 LTVHTLSTLEKNGVPKTDDDAKF-GKGNIVANIKAICHGKEVIDSTKDIPANEQIGIILD 530

Query: 574 SSSFYAEQGGQIFDEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVIC 631
            ++FYAEQGGQ +D G   I+G      V+NVQ+YGG+V+H G +    G FSV + VI 
Sbjct: 531 KTNFYAEQGGQEYDTGKIVIDGQ-AELDVQNVQMYGGYVLHTGFIK--YGNFSVNDSVIA 587

Query: 632 KVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLR 691
           + D  RR  I  NHT TH+LNFALREVLGD +DQKGS+V  EKLRFDFSH   +    L 
Sbjct: 588 EYDELRRWPIRNNHTGTHILNFALREVLGDGIDQKGSLVAAEKLRFDFSHKSAISDSDLE 647

Query: 692 RIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADP 751
           +IE+   + I+    V+S+E  LA A+ I G+RAVFGE YPDPVRVV++G +++++L + 
Sbjct: 648 KIEAKSTDYIRQNCAVYSQEVPLATAREITGVRAVFGETYPDPVRVVSVGVELDEILKNV 707

Query: 752 ENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSL 811
           ++  W  +S E CGGTH+  T + +   +L E GIAKGIRRI AVT   A++    A   
Sbjct: 708 KDPRWEGVSIEFCGGTHVQKTGDIKDLVILEESGIAKGIRRIIAVTGEDAHEVQRVAREF 767

Query: 812 EKEVD--------------------DASKIEGSLLEK----NQVRKAQKKV--AEENLQK 845
            + ++                    D +++  S +EK    NQ  +  KK+  A++  QK
Sbjct: 768 GERLNRFEKMPAGPERDAEIKSLQVDLNQLTISAVEKTKYRNQFTQIHKKITDAQKAAQK 827

Query: 846 A-VKVATETAEAAASNGK--PFCISRVEVGLDAAAVREAVLKV-IEQKGMPVMVFSTDET 901
           A VK A +   A     K  P  + ++ +  +  A+ E++  V  +  G  + VF+ D  
Sbjct: 828 AEVKTAIDAISAYFEENKDSPSLVIKLPITANQKAISESLNHVKTKLSGKALYVFAAD-A 886

Query: 902 TNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMD 961
           +  A  C   P+ +  +K    +EW +A    + G+ G GK  +A G GT+  +V  A+D
Sbjct: 887 SKVAHGCYVTPDLT--TKGASANEWASAVSSIVGGKAG-GKAPVAIGNGTEVNKVDEALD 943

Query: 962 LAAEF 966
            A ++
Sbjct: 944 EATKY 948


>gi|322694715|gb|EFY86537.1| alanyl-tRNA synthetase [Metarhizium acridum CQMa 102]
          Length = 952

 Score =  822 bits (2124), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 449/958 (46%), Positives = 601/958 (62%), Gaps = 51/958 (5%)

Query: 56  VEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQ 115
           ++WP+  VR+ FF +   + H    S  VVP +DPTLLF NAGMNQ+KPIFLGT + +  
Sbjct: 4   LKWPSALVREAFFDYMRQRGHTIVPSGSVVPYDDPTLLFTNAGMNQFKPIFLGTINQSDP 63

Query: 116 LSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELL 175
           ++ L RA +TQK IRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK EAIE AWE+L
Sbjct: 64  MANLKRAADTQKVIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIEMAWEIL 123

Query: 176 TKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTG 234
           TKVY L   RLYATYF G+++ GL PD+EA+ +WL   +P  +++P   KDNFWEMGD G
Sbjct: 124 TKVYGLDPKRLYATYFEGNKELGLPPDDEAKQLWLDIGMPEDQIVPGDMKDNFWEMGDQG 183

Query: 235 PCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           PCGP SEIHYD+ G R+AA +VN DDP  +EIWN+VF+QF+R+ DGSLKPLPAKH+DTG+
Sbjct: 184 PCGPSSEIHYDKIGGRNAAHIVNKDDPMVVEIWNLVFMQFDRQKDGSLKPLPAKHIDTGM 243

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFER+ S LQ   SNY TD F P+F  I++ TG RPYS K G DDAD +D AYRV+ADHI
Sbjct: 244 GFERMVSALQETDSNYATDCFTPLFKQIEEVTGVRPYSDKYGKDDADGIDTAYRVIADHI 303

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVF 413
           RTLSFAI DG+ P ++GR YV+RRILRR VRY  + LKA+ G FF+ ++  +V  MGD F
Sbjct: 304 RTLSFAITDGAVPNSDGRGYVIRRILRRGVRYARKYLKAEIGSFFSKILPALVSHMGDQF 363

Query: 414 PELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG---KVLSGQDAFILWDTYG 470
           PEL +++  I+EI+  EE +F +TL +G  +F+K A        K L G   + L+DT+G
Sbjct: 364 PELVKKQLDIKEILDEEEEAFARTLDRGEAQFEKYAAKAAKNGVKKLDGDVVWRLYDTFG 423

Query: 471 FPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGV 530
           FP+DLTQ+MAEERGL +D    + A ++ARE S++ +      A  +D    A L ++ V
Sbjct: 424 FPVDLTQIMAEERGLEIDEIEVSVAREKAREASKAVKASVDTFA-KLDVHQIAQLDQQKV 482

Query: 531 LATDDSFKFIWFQDHKSVIKAIYTGSEFIESV--VPGNE-VGIVLASSSFYAEQGGQIFD 587
             TDD  KF+   D K  ++ I+ G  F  S   +P N  +GI+L  ++FYAE GGQ+ D
Sbjct: 483 ARTDDDAKFVK-GDSKGKVQLIFDGKSFHNSTKELPKNTAIGILLDKTNFYAESGGQVAD 541

Query: 588 EG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            G   I+ +   F V +VQ YGGF++H G +  GA   S G+EVIC+ D  RR  I  NH
Sbjct: 542 TGRIVIDDVV-EFKVMDVQNYGGFILHSGYIEYGA--LSSGDEVICEYDELRRSPIRNNH 598

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           T TH+LN +LREVLGD ++QKGS+V  EKLRFDFSH   V  E LR+IE++ NE I+   
Sbjct: 599 TGTHVLNHSLREVLGDDINQKGSLVDNEKLRFDFSHKSQVKIEELRKIETLSNEYIRRNS 658

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            +FSK+  L  A+ I G+RAVFGE YP+PVRVV+IG  V+ +L DP+ +EW   S E CG
Sbjct: 659 KIFSKDVDLDLARQIEGVRAVFGETYPNPVRVVSIGMDVDTMLKDPKKQEWRQYSVEFCG 718

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVD--------- 816
           GTH+  T   +   L+ E GIAKGIRRI A T   A++    A    K++D         
Sbjct: 719 GTHVEQTGLIKDLILVEESGIAKGIRRIIAYTGDAAHQVQREAAEFSKKLDVLEAMPFGP 778

Query: 817 -----------DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNG---- 861
                      + S++  S L K+++    +K+A   + +  K   + AEA A+ G    
Sbjct: 779 AKDAQTKVISQELSQLVISTLAKDELNTRFQKIATSVVAEQKK--RQKAEAGAAVGCVVK 836

Query: 862 -------KPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEK 914
                    + + R+ +  +A A+ E V K  + K     V+    +  +  V  GV   
Sbjct: 837 HFEEKKEADYFVGRLPISANAKALTE-VFKHFQAKDKTKSVYVFGGSQEEGAVVHGVYVG 895

Query: 915 SD-QSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           S   SK +   +W +     + GR G GK     GQGT   ++  A++ A ++   KL
Sbjct: 896 SGLASKGVTAEQWASVVSDVVGGRSG-GKEPTRQGQGTKPEKIDDAVEAARKWLEEKL 952


>gi|240278873|gb|EER42379.1| alanyl-tRNA synthetase [Ajellomyces capsulatus H143]
          Length = 961

 Score =  822 bits (2124), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 450/960 (46%), Positives = 604/960 (62%), Gaps = 64/960 (6%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           EWPA +VR+ F  FF++  H    SS VVP++DPTLLF NAGMNQYK IFLGT DPN+  
Sbjct: 11  EWPALRVRNAFLDFFKENGHTFVPSSSVVPLSDPTLLFTNAGMNQYKSIFLGTVDPNSDF 70

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
           + L RA N+QKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK EAI ++W+LLT
Sbjct: 71  ATLRRAHNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIRYSWDLLT 130

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
           KVY L  DRLY TYF G+  AG+ PD EA+++WL   +    +L    KDNFWEMG+ GP
Sbjct: 131 KVYGLNPDRLYVTYFEGNPDAGIGPDLEAKELWLSVGVAEDHLLSGNMKDNFWEMGEQGP 190

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPCSEIHYDR G R+A+ LVN DDP  +EIWN VFIQ+NRE D SL+PLP KHVDTG+G
Sbjct: 191 CGPCSEIHYDRIGARNASHLVNQDDPNVLEIWNNVFIQYNREPDKSLRPLPNKHVDTGMG 250

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
           +ERL SILQNK SNYDTDVF P+F+ I + TG RPY+GK   +D D +D AYRVVADH+R
Sbjct: 251 YERLVSILQNKSSNYDTDVFTPLFEKISEITGCRPYTGKFHEEDTDGIDTAYRVVADHVR 310

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQ-DGFFNGLVNIVVKVMGDVFP 414
           TL+FAI+DG+ P NEGR YV+RR+LRR  RY  + L  +  GFF+ +V  +V  MGD+FP
Sbjct: 311 TLTFAISDGASPNNEGRGYVVRRVLRRGARYARKYLNVEIGGFFSKIVPTLVDQMGDMFP 370

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFK----KAAQDVQGKVLSGQDAFILWDTYG 470
           E+++++  + EI+  EE SF KTL +G   F+    +A Q   GK L G D + L+DT+G
Sbjct: 371 EIRRKQTDVMEILDEEEISFAKTLDRGERLFEEYALQAKQKGSGK-LHGADVWRLYDTFG 429

Query: 471 FPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGV 530
           FP+DLT+LMAEERGL +D    N   +EAR +S+ A   Q  G    D      +H  G+
Sbjct: 430 FPVDLTRLMAEERGLTID----NAEFEEARLKSKEASKGQ--GKRTADV-VKLTVHDLGL 482

Query: 531 L-------ATDDSFKFIWFQDHKSVIKAIYTGSEFIESV--VP-GNEVGIVLASSSFYAE 580
           L        T+D  KF    +  S IKAIY   +F++S   +P G + GI+L  ++FYAE
Sbjct: 483 LETMDDVPKTNDDAKF-GRGNITSQIKAIYYNKKFVDSTKDIPQGEQFGIILDRTNFYAE 541

Query: 581 QGGQIFDEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRR 638
           QGGQ  D G   I+G      V +VQ+YGG+++H G +  G+  F+V + VI + D  RR
Sbjct: 542 QGGQENDTGKIIIDGK-AELAVEDVQVYGGYILHTGFMKYGS--FNVNDSVIAEYDELRR 598

Query: 639 KLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVN 698
             I  NHT TH+LNFALR+VLGD ++QKGS+V  EKLRFDFSH   V    L +IE I  
Sbjct: 599 WPIRNNHTGTHILNFALRQVLGDGIEQKGSLVAAEKLRFDFSHKSAVSDSDLEKIERIST 658

Query: 699 EQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLS 758
           + I+    V++K+  LA A+ I+G+RAVFGE YPDPVRVV++G ++E++L +  +  W  
Sbjct: 659 DYIRQNCAVYAKDVPLATARGISGVRAVFGETYPDPVRVVSVGVELEEILQNVHDPRWKD 718

Query: 759 ISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSL------- 811
           IS E CGGTH+  T + +   +L E GIAKGIRRI AVT   A++    A          
Sbjct: 719 ISIEFCGGTHVQKTGDIKDLVILEESGIAKGIRRIIAVTGEEAHEVQRIAKEFGERLRRF 778

Query: 812 -------EKEVD------DASKIEGSLLEKNQVR-----------KAQKKVAEENLQKAV 847
                  +KE++      D +++  S +EK + R           + QK   +   +KA+
Sbjct: 779 EKMELGPQKEIEAKLLQVDLNQLSISAVEKARFREQFAQIHKKVLEGQKAAQKLESKKAL 838

Query: 848 KVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKV-IEQKGMPVMVFSTDETTNKAV 906
              T   EA  +      + ++ +  +  A+ +++  V  + +   V VF+ D+   K V
Sbjct: 839 DAITGYFEAPENKVASHLVMQLPISANPKALSDSLNFVKTKMQDKSVYVFAADKEAGKVV 898

Query: 907 VCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEF 966
               V + S   +    ++W  A    + GR G GK  ++ G GT+A ++  A+  A E+
Sbjct: 899 HGCHVAQ-SLSEQGATPNDWANAVSSIVGGRAG-GKAPISIGNGTEAEKLDEAIKAATEY 956


>gi|325090131|gb|EGC43441.1| alanyl-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 961

 Score =  822 bits (2124), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 450/960 (46%), Positives = 604/960 (62%), Gaps = 64/960 (6%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           EWPA +VR+ F  FF++  H    SS VVP++DPTLLF NAGMNQYK IFLGT DPN+  
Sbjct: 11  EWPALRVRNAFLDFFKENGHTFVPSSSVVPLSDPTLLFTNAGMNQYKSIFLGTVDPNSDF 70

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
           + L RA N+QKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK EAI ++W+LLT
Sbjct: 71  ATLRRAHNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIRYSWDLLT 130

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
           KVY L  DRLY TYF G+  AG+ PD EA+++WL   +    +L    KDNFWEMG+ GP
Sbjct: 131 KVYGLNPDRLYVTYFEGNPDAGIGPDLEAKELWLSVGVAEDHLLSGNMKDNFWEMGEQGP 190

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPCSEIHYDR G R+A+ LVN DDP  +EIWN VFIQ+NRE D SL+PLP KHVDTG+G
Sbjct: 191 CGPCSEIHYDRIGARNASHLVNQDDPNVLEIWNNVFIQYNREPDKSLRPLPNKHVDTGMG 250

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
           +ERL SILQNK SNYDTDVF P+F+ I + TG RPY+GK   +D D +D AYRVVADH+R
Sbjct: 251 YERLVSILQNKSSNYDTDVFTPLFEKISEITGCRPYTGKFHEEDTDGIDTAYRVVADHVR 310

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQ-DGFFNGLVNIVVKVMGDVFP 414
           TL+FAI+DG+ P NEGR YV+RR+LRR  RY  + L  +  GFF+ +V  +V  MGD+FP
Sbjct: 311 TLTFAISDGASPNNEGRGYVVRRVLRRGARYARKYLNVEIGGFFSKIVPTLVDQMGDMFP 370

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFK----KAAQDVQGKVLSGQDAFILWDTYG 470
           E+++++  + EI+  EE SF KTL +G   F+    +A Q   GK L G D + L+DT+G
Sbjct: 371 EIRRKQTDVMEILDEEEISFAKTLDRGERLFEEYALQAKQKGSGK-LHGADVWRLYDTFG 429

Query: 471 FPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGV 530
           FP+DLT+LMAEERGL +D    N   +EAR +S+ A   Q  G    D      +H  G+
Sbjct: 430 FPVDLTRLMAEERGLTID----NAEFEEARLKSKEASKGQ--GKRTADV-VKLTVHDLGL 482

Query: 531 L-------ATDDSFKFIWFQDHKSVIKAIYTGSEFIESV--VP-GNEVGIVLASSSFYAE 580
           L        T+D  KF    +  S IKAIY   +F++S   +P G + GI+L  ++FYAE
Sbjct: 483 LETMDDVPKTNDDAKF-GRGNITSQIKAIYYNKKFVDSTKDIPQGEQFGIILDRTNFYAE 541

Query: 581 QGGQIFDEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRR 638
           QGGQ  D G   I+G      V +VQ+YGG+++H G +  G+  F+V + VI + D  RR
Sbjct: 542 QGGQENDTGKIIIDGK-AELAVEDVQVYGGYILHTGFMKYGS--FNVNDSVIAEYDELRR 598

Query: 639 KLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVN 698
             I  NHT TH+LNFALR+VLGD ++QKGS+V  EKLRFDFSH   V    L +IE I  
Sbjct: 599 WPIRNNHTGTHILNFALRQVLGDGIEQKGSLVAAEKLRFDFSHKSAVSDSDLEKIERIST 658

Query: 699 EQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLS 758
           + I+    V++K+  LA A+ I+G+RAVFGE YPDPVRVV++G ++E++L +  +  W  
Sbjct: 659 DYIRQNCVVYAKDVPLATARGISGVRAVFGETYPDPVRVVSVGVELEEILQNVHDPRWKD 718

Query: 759 ISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSL------- 811
           IS E CGGTH+  T + +   +L E GIAKGIRRI AVT   A++    A          
Sbjct: 719 ISIEFCGGTHVQKTGDIKDLVILEESGIAKGIRRIIAVTGEEAHEVQRIAKEFGERLRRF 778

Query: 812 -------EKEVD------DASKIEGSLLEKNQVR-----------KAQKKVAEENLQKAV 847
                  +KE++      D +++  S +EK + R           + QK   +   +KA+
Sbjct: 779 EKMELGPQKEIEAKLLQVDLNQLSISAVEKARFREQFAQIHKKVLEGQKAAQKLESKKAL 838

Query: 848 KVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKV-IEQKGMPVMVFSTDETTNKAV 906
              T   EA  +      + ++ +  +  A+ +++  V  + +   V VF+ D+   K V
Sbjct: 839 DAITGYFEAPENKVASHLVMQLPISANPKALSDSLNFVKTKMQDKSVYVFAADKEAGKVV 898

Query: 907 VCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEF 966
               V + S   +    ++W  A    + GR G GK  ++ G GT+A ++  A+  A E+
Sbjct: 899 HGCHVAQ-SLSEQGATPNDWANAVSSIVGGRAG-GKAPISIGNGTEAEKLDEAIKAATEY 956


>gi|299751839|ref|XP_001830532.2| tRNA synthetase class II [Coprinopsis cinerea okayama7#130]
 gi|298409558|gb|EAU91282.2| tRNA synthetase class II [Coprinopsis cinerea okayama7#130]
          Length = 968

 Score =  822 bits (2123), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 453/954 (47%), Positives = 596/954 (62%), Gaps = 58/954 (6%)

Query: 58  WPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLS 117
           W + +VR+ FF++F  ++H   +SSP +P +DPTLLFANAGMNQYK IFLGT DPN++LS
Sbjct: 11  WTSRRVREEFFEYFRARDHTFVRSSPTIPFDDPTLLFANAGMNQYKSIFLGTVDPNSELS 70

Query: 118 KLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTK 177
           K+ RA N+QKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK EAI+++W+LLT+
Sbjct: 71  KVKRAFNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIKYSWDLLTR 130

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFW--------- 228
           VY L  DRLY TYF GD   GL PD EA++ WL++LP  RVLP   KDNFW         
Sbjct: 131 VYGLSPDRLYVTYFEGDPANGLEPDLEAKECWLEYLPEDRVLPGNAKDNFWGAWCHPPEL 190

Query: 229 ----EMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKP 284
                 G  G      EIHYDR G R AA LVN DDP  +EIWN VFIQFNRE DG+LKP
Sbjct: 191 DLANRRGRDGRYRSLREIHYDRIGGRQAAHLVNQDDPDVLEIWNNVFIQFNREPDGTLKP 250

Query: 285 LPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVD 344
           LPAKHVDTG+GFERL S++Q+K SNYDTDVF PIF  IQ+ +G RPY G+ GADDAD +D
Sbjct: 251 LPAKHVDTGMGFERLVSVIQDKRSNYDTDVFTPIFAKIQELSGVRPYEGRFGADDADGID 310

Query: 345 MAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVN 403
            AYRVVADH+RTL+FA++DG  P N GR YVLRR+LRR  RY  + L    G FF+ L+ 
Sbjct: 311 TAYRVVADHVRTLTFALSDGGVPNNVGRGYVLRRVLRRGSRYARKKLGVPIGSFFSSLMP 370

Query: 404 IVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG---KVLSGQ 460
           +VV+ MGD+FPE+ ++   I+EI+  EE SF +TL +G + F + A   +    K LSG 
Sbjct: 371 VVVETMGDIFPEITKKVDDIKEILDEEEESFSRTLDRGEKLFDQYAAKAKAEGRKELSGA 430

Query: 461 DAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDAD 520
           D + L+DTYGFP+DLT+LMAEE GL ++   F  A  +++E S+    K     + +D  
Sbjct: 431 DVWRLYDTYGFPVDLTRLMAEELGLGINDAEFEEAQRKSKEASKGTAKKDTAEIVKLDVH 490

Query: 521 ATAALHK-RGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESV--VPGNEV-GIVLASSS 576
             A L K   V  TDDS KF    +  + +KAI    +F+ S   +P +   G++L  +S
Sbjct: 491 ELAILEKDDSVPKTDDSAKF-GTGNITATVKAIVYDKKFLTSTQDIPEDATFGVILDKTS 549

Query: 577 FYAEQGGQIFDEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVD 634
           FYAE GGQ +D G   I+G    F V NVQ+Y G+V+H G L    G+  VG EVI   D
Sbjct: 550 FYAESGGQEYDTGNIVIDGA-ADFEVTNVQVYNGYVVHTGHLK--YGQLDVGSEVISSYD 606

Query: 635 YDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIE 694
             RR  +  NHT TH+LNFALREVLGDHVDQKGS+V P KLRFDFSH   +    L +IE
Sbjct: 607 ELRRWPLRNNHTATHILNFALREVLGDHVDQKGSLVAPTKLRFDFSHKAGITLPELTKIE 666

Query: 695 SIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENK 754
           S+  + IK  + V+ K+  L  A+ I GLRAVFGE YP+PVRVV +   V+++ AD EN 
Sbjct: 667 SMSIDWIKKNVKVYGKDLDLNLAQKIPGLRAVFGETYPNPVRVVTLEYSVDEIAADIENP 726

Query: 755 EWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKE 814
           +W   S E CGGTH++ T + + F +  E GIAKGIRRI AVT   A +    A +LE++
Sbjct: 727 KWRQTSIEFCGGTHVAKTGDIKGFVITEESGIAKGIRRIIAVTGHEAAEVTRVAQALEEK 786

Query: 815 VDDASKIEGS---------LLEKNQ-----VRKAQKKVAEENLQKAVKVATETAEAAASN 860
           ++ A  ++G           +E  Q     ++KA+ K     ++KA   A +  EAAA  
Sbjct: 787 LNQADALDGKAKDAALKALTVELGQADISVLKKAELKDKLNAMRKAFDKAVKEKEAAAGK 846

Query: 861 G------KPFC--------ISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAV 906
                  K F         I+ VE G +A  + +++     +    + VFS D    K V
Sbjct: 847 KALEDFQKHFVENPNAQVYIALVEAGGNAKLL-QSIATAARKAEKSIYVFSHDAEQGK-V 904

Query: 907 VCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAM 960
                   + +++ ++  +W       + G+ G GK   A G G++A+++  A+
Sbjct: 905 PHVNYVAPNLKAQGVDARQWAAKVTDLIGGKAG-GKEESAQGVGSEASKLQEAI 957


>gi|340517287|gb|EGR47532.1| predicted protein [Trichoderma reesei QM6a]
          Length = 954

 Score =  822 bits (2123), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 450/957 (47%), Positives = 603/957 (63%), Gaps = 50/957 (5%)

Query: 58  WPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLS 117
           WP  +VR TFF FFE + H    S  VVP NDPTLLF NAGMNQ+KPIFLGT + +  +S
Sbjct: 5   WPEAQVRKTFFDFFEQRGHTLVPSGSVVPHNDPTLLFTNAGMNQFKPIFLGTVNKSDPMS 64

Query: 118 KLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTK 177
            L RA +TQK IRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK +AIE AWELLTK
Sbjct: 65  NLKRAVDTQKVIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKDAIEMAWELLTK 124

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPC 236
           VY L   RLY TYF G+    L PD EA+++W    +P  ++LP   KDNFWEMGD GPC
Sbjct: 125 VYGLDPARLYVTYFEGNPALNLEPDLEAKELWKSVGVPEDQILPGNMKDNFWEMGDQGPC 184

Query: 237 GPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGF 296
           GPCSE+HYD+ G R+AASLVN DDP  +EIWN+VF+QF+R+ DGSLKPLPAKH+DTG+GF
Sbjct: 185 GPCSEVHYDKIGGRNAASLVNMDDPMVVEIWNLVFMQFDRQKDGSLKPLPAKHIDTGMGF 244

Query: 297 ERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRT 356
           ERL S LQ+  SNY TD F P+F  I++ TGARPY+ K GADDAD +D AYRVVADHIRT
Sbjct: 245 ERLVSALQDTASNYATDCFTPLFKQIEEVTGARPYTDKYGADDADGIDTAYRVVADHIRT 304

Query: 357 LSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFPE 415
           +SFAI DG+ P N+GR YV+RRILRR VRY  + L A+ G FF+ ++  +V  MG+ FP+
Sbjct: 305 MSFAITDGAVPNNDGRGYVIRRILRRGVRYARKYLNAEIGSFFSKILPALVAQMGEQFPD 364

Query: 416 LKQREAHIREIIAAEEASFGKTLLKGIEKFK----KAAQDVQGKVLSGQDAFILWDTYGF 471
           L +++A I+EI+  EE +F +TL +G  +F+    KAA+D   K L G   + L+DT+GF
Sbjct: 365 LAKKQADIKEILDEEEEAFSRTLDRGEAQFERYAAKAAKD-NVKKLDGDVVWRLYDTFGF 423

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR-GV 530
           P+DLT+LMAEERGL +D      A ++ARE S++ ++     A  +D    A L     V
Sbjct: 424 PVDLTKLMAEERGLEIDEAEVAVAREKAREASKAVKDSVQTFA-KLDVHKIAELDTDLKV 482

Query: 531 LATDDSFKFIWFQDHKSVIKAIYTGSEFIESV--VPGNE-VGIVLASSSFYAEQGGQIFD 587
             T+D  K++   D K  ++ I+ G  F++S   +P N  +G++L  ++FYAE GGQ+ D
Sbjct: 483 SRTNDDAKYLK-GDSKGKVQYIFDGKSFLKSTKDIPANTAIGVLLDQTNFYAESGGQVAD 541

Query: 588 EG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            G   I+ +   F V +VQ YGG+++H G +    G  S G+EVIC+ D  RR  I  NH
Sbjct: 542 TGRIVIDDVV-EFKVIDVQDYGGYILHSGYIE--YGELSSGDEVICEYDELRRSPIRNNH 598

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           T TH+LN +LREVLGD V QKGS+V  EKLRFDFSH   V  + L++IE + N+ I+A  
Sbjct: 599 TGTHILNHSLREVLGDDVHQKGSLVDNEKLRFDFSHKTQVKLDELKKIEELSNQDIRANA 658

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            ++SK+  L  A  I GLRAVFGE YP+PVRVV+IG  V+ LLADP+N +W   S E CG
Sbjct: 659 KIYSKDVELDRALQIEGLRAVFGETYPNPVRVVSIGMDVDTLLADPKNPDWRKYSVEFCG 718

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVD--------- 816
           GTH+  T   +   ++ E GIAKGIRRI A T   A++    A   E+++D         
Sbjct: 719 GTHVEQTGLIKDLVIVEESGIAKGIRRIIAYTGEAAHQVQREAKLFEQKLDELESLPFGP 778

Query: 817 -----------DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAA------- 858
                      + S++  S L K++  +  +K+A   + +  K     ++ AA       
Sbjct: 779 EKEAQVKAVSQELSQLVISTLTKDEFNQRFQKIANAVVAEQKKKQKAESKTAADVVAKHF 838

Query: 859 --SNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSD 916
             +    + + R+ +  +A AV E V+K  + K     V+       +  V  GV   + 
Sbjct: 839 ETNKDSKYFVGRLPISANAKAVGE-VIKYYQSKDKEKSVYVFVGGAEEGAVAHGVYVGTH 897

Query: 917 QSKQ-LEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKLR 972
            S Q +   +W  +  + + GR G GK     GQGT   ++  A++ A ++   KL+
Sbjct: 898 LSSQGVTAEQWAASVSEVIGGRSG-GKEPSRQGQGTQPEKIDDAVETARKWLEEKLK 953


>gi|212541448|ref|XP_002150879.1| alanyl-tRNA synthetase, putative [Talaromyces marneffei ATCC 18224]
 gi|210068178|gb|EEA22270.1| alanyl-tRNA synthetase, putative [Talaromyces marneffei ATCC 18224]
          Length = 1000

 Score =  822 bits (2122), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 477/1001 (47%), Positives = 620/1001 (61%), Gaps = 63/1001 (6%)

Query: 13  FVATARVLLNPSLTLAVTNHHHSLISRFSASAVAAMPGADPQVVEWPATKVRDTFFKFFE 72
           F A  R L  P  +       +     FS    + M  +  +  +W A +VR+ F  +F+
Sbjct: 10  FHALPRALRLPHFSATAATPRY-----FSHHFASNMASSQEKTSQWTAERVRNEFIDYFK 64

Query: 73  DKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAG 132
           ++ H    SS VVPV+DPTLLFANAGMNQYK IFLGT DP +  + L RA N+QKCIRAG
Sbjct: 65  ERGHTFVPSSSVVPVSDPTLLFANAGMNQYKSIFLGTVDPQSDFAHLKRAVNSQKCIRAG 124

Query: 133 GKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLPADRLYATYFG 192
           GKHNDLDDVGKD YHHTFFEMLGNWSFGDYFKNEAI ++WELLTKV+ L   RLY TYF 
Sbjct: 125 GKHNDLDDVGKDNYHHTFFEMLGNWSFGDYFKNEAITYSWELLTKVFGLDPSRLYVTYFE 184

Query: 193 GDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRD 251
           GD + GL PD EA+DIW K  +P   +LP   KDNFWEMGD GPCGPCSE+HYDR G R+
Sbjct: 185 GDAQGGLEPDLEAKDIWRKVGVPEDHILPGNMKDNFWEMGDQGPCGPCSEVHYDRIGGRN 244

Query: 252 AASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYD 311
           AASLVN DDP  +EIWN VFIQ+NRE+D SL+PLP KHVDTG+GFERL S+LQ+K SNYD
Sbjct: 245 AASLVNQDDPNVLEIWNNVFIQYNREADRSLRPLPNKHVDTGMGFERLVSVLQDKSSNYD 304

Query: 312 TDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEG 371
           TDVFMP+F  IQ+ TGAR Y G+ GA+DAD VD AYRVVADH+RTL+FAI+DG+ P NEG
Sbjct: 305 TDVFMPLFRTIQEITGAREYQGRFGAEDADGVDTAYRVVADHVRTLTFAISDGAYPNNEG 364

Query: 372 REYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFPELKQREAHIREIIAAE 430
           R YV+RR+LRR  RY  +    + G FF+ +V  +V  MG +FPE+K+++  + E +  E
Sbjct: 365 RGYVIRRVLRRGARYARKYFNVEIGSFFSKIVPTLVNQMGGMFPEIKEKQDEVMEALNEE 424

Query: 431 EASFGKTLLKGIEKFKKAAQDVQGKVLS---GQDAFILWDTYGFPLDLTQLMAEERGLLV 487
           E SF KTL +G ++F+  AQ  + K L+   G D + L+DT+GFP+DLTQ+MAEERGL +
Sbjct: 425 EVSFSKTLDRGEKQFENYAQQAKSKGLNKLHGADVWRLYDTFGFPVDLTQIMAEERGLSI 484

Query: 488 DIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAAL-HKRGVLATDDSFKFIWFQDHK 546
           D   F  A  +A+E S+  Q K A   + +D      L +   V  TDDS KF   +  +
Sbjct: 485 DEAEFEEARLKAKEASK-GQKKAAAETVKLDVHDLGKLDNMHEVPKTDDSSKFDSPK-IE 542

Query: 547 SVIKAIYTGSEFIESV--VP-GNEVGIVLASSSFYAEQGGQIFDEG--FIEGLFGSFYVR 601
           SV+KAIY    FI++   VP G ++G++L  ++FYAEQGGQ  D G  +I G      V 
Sbjct: 543 SVVKAIYYSKSFIQTTADVPEGEQIGVILDRTNFYAEQGGQENDTGAIYINGK-AELEVG 601

Query: 602 NVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGD 661
           +VQ YGG+V+H G +  G+   +VG+ V C+ D  RR+ I  NHT TH+LNFALREVLGD
Sbjct: 602 DVQSYGGYVLHTGFIKYGS--LAVGDSVTCEFDDRRRQPIRNNHTGTHILNFALREVLGD 659

Query: 662 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCIN 721
            ++QKGS+V  EKLRFDFSH   V  + L +IE    E I+    V+SKE  LA A+ I+
Sbjct: 660 GINQKGSLVAAEKLRFDFSHKAGVSDKELDQIERKSTEYIRQNCGVYSKEVPLATAREIS 719

Query: 722 GLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALL 781
           G+RAVFGE YPDPVRVV++G +VE++L D ++  W  IS E CGGTH+S + E     +L
Sbjct: 720 GVRAVFGETYPDPVRVVSVGVEVEEILKDVKDPRWNDISIEFCGGTHVSKSGEIRELVIL 779

Query: 782 SEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSL----------LEKNQV 831
            E GIAKGIRRI AVT   A +A   A   EK ++    +E             LE NQ+
Sbjct: 780 EESGIAKGIRRIIAVTGDEALQAQLTAVEFEKRLEKLRTMEHGAAKETEMKQVQLELNQL 839

Query: 832 ------------------------RKAQKKVAEENLQKAVKVATETAEAAASNGKPFCIS 867
                                   +KAQ+KV    L+KA  +     +A  + G+   ++
Sbjct: 840 SISAVQKAKFRDLFARINKQVLDDQKAQQKV---ELKKAQDLIKAYFDAEENKGRSTFVA 896

Query: 868 RVEVGLDAAAVREAVLKVIEQK--GMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSE 925
           ++    ++  V E++   I+ K     V  F+ D + NK      V  K+     L  S 
Sbjct: 897 KLPATSNSKVVSESI-NFIKSKMADKTVYFFAPDPSGNKVAHGCHV-SKAASDLGLSPSG 954

Query: 926 WLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEF 966
           W    +    G    GK   A G GT+  +V   + LA E+
Sbjct: 955 WANV-VSGAVGGKAGGKAPTAIGNGTNPDKVDEGVALATEY 994


>gi|296420542|ref|XP_002839828.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295636034|emb|CAZ84019.1| unnamed protein product [Tuber melanosporum]
          Length = 959

 Score =  820 bits (2119), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 450/953 (47%), Positives = 607/953 (63%), Gaps = 51/953 (5%)

Query: 56  VEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQ 115
           VEWPA+ VR TF  +F++  H    SS VVP++DPTLLFANAGMNQYK IFLGT DP++ 
Sbjct: 8   VEWPASLVRKTFIDYFKNNGHTFVPSSSVVPLSDPTLLFANAGMNQYKSIFLGTVDPSSD 67

Query: 116 LSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELL 175
            + L RA N+QKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK EA+E++WELL
Sbjct: 68  FASLKRAANSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAVEYSWELL 127

Query: 176 TKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTG 234
           T++Y L  DRLY TYF G+++ GL PD E +++W    +  + +LP   KDNFWEMGD G
Sbjct: 128 TEIYGLDPDRLYVTYFEGNKERGLEPDLETQELWRAVGVADNHILPGNMKDNFWEMGDQG 187

Query: 235 PCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           PCGPCSE+HYD  G R+A+ LVN DDP  IEIWN VFIQ+NRE D SL+ LP KHVDTG+
Sbjct: 188 PCGPCSEVHYDHIGGRNASHLVNMDDPNVIEIWNNVFIQYNREPDHSLRSLPNKHVDTGM 247

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL S+LQ+K SNYDTDVF P+F  IQ+ T ARPY GK GA+D D +D AYRV+ADH+
Sbjct: 248 GFERLVSVLQDKSSNYDTDVFSPLFQKIQEITKARPYGGKFGAEDVDGIDTAYRVIADHV 307

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVF 413
           RTL+FAIADG  P NEGR YV+RR+LRR  RY     +A  G FF+ +V  +V  +GDVF
Sbjct: 308 RTLTFAIADGGVPNNEGRGYVVRRVLRRGARYARRYFQAPIGEFFSKIVPTLVLQLGDVF 367

Query: 414 PELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTYG 470
           PE+K++E+ ++EI+  EE SF +TL +G    + F K A +   KVL G D + L+DT+G
Sbjct: 368 PEIKKKESDVKEILNEEEESFSRTLDRGERMFDVFSKRATEHNSKVLKGSDVWRLYDTFG 427

Query: 471 FPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRG- 529
           FP+DLT++MAEE GL ++ E F  A  E++E S++ ++      + +       L +   
Sbjct: 428 FPVDLTRIMAEENGLEINEEEFERAKAESKEASKARKSSGDVELLKLGVHDLGRLEQMAE 487

Query: 530 VLATDDSFKFIWFQDHKSVIKAIYTGSEFIES---VVPGNEVGIVLASSSFYAEQGGQIF 586
           V  TDD +KF    +    I AIY    F  S   +    ++G++L  ++FYAEQGGQ +
Sbjct: 488 VPKTDDVYKF-GRGNITGHIMAIYCDKSFRSSTANISRYTQLGLILDKTNFYAEQGGQEY 546

Query: 587 DEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           D G   I+G      V+NVQ+YGG+V+H G +  G    SVG++VIC+ D  RR  I  N
Sbjct: 547 DTGKILIDGE-AELDVQNVQVYGGYVLHTGYIKYGT--LSVGDDVICEYDELRRWPIRNN 603

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           HT TH+LN+ALREVLGD ++QKGS+V  EKLRFDFSH   V    L  IE I  E I+  
Sbjct: 604 HTGTHVLNYALREVLGDGIEQKGSLVAAEKLRFDFSHKCGVTDAELEMIEKISTEYIRQN 663

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
           L+V+S++  L+ A+ I G+RAVFGE YPDPVRVV++G  +E+L  D +NK+W  +S E C
Sbjct: 664 LEVYSEDVPLSIAREIEGVRAVFGETYPDPVRVVSVGVPIEELTRDVKNKQWRKVSIEFC 723

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEG- 823
           GGTH+  T + +   +L E GIAKGIRRI AVT   A K  + A   E+ ++   K+   
Sbjct: 724 GGTHVQKTDDIKDLIILEENGIAKGIRRIVAVTGNDAGKVQKIASQFEERINALGKLPAG 783

Query: 824 -------------------SLLEKNQVRKA-----------QKKVAEENLQKAVKVATET 853
                              S ++K Q++             QK   +  L+KAV++ TE 
Sbjct: 784 PRKEAEIKSVQADLNSLVISAVKKVQLKDKFGKIHKQLLDDQKAKQKAELKKAVEIVTEH 843

Query: 854 AEAAASNGKPFCISRVEVGLDAAAVREAVLKV-IEQKGMPVMVFSTDETTNKAVVCAGVP 912
            +    +  P+ +S++ +  ++ A+ +A+  V  + K   V +F+TD+     V+  G  
Sbjct: 844 FKQNPDS--PYFVSKLPISANSKALSDAIKHVQTKAKDKTVYLFATDDDAEGKVI-HGCY 900

Query: 913 EKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAE 965
              +  KQL   + L  ++  + G    GKG  + G G    +V  A+D AA+
Sbjct: 901 VAENVGKQLSAKD-LADSISQIVGGKAGGKGATSQGIGNKVDKVGEAVDAAAK 952


>gi|156838512|ref|XP_001642960.1| hypothetical protein Kpol_1071p9 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156113543|gb|EDO15102.1| hypothetical protein Kpol_1071p9 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 957

 Score =  820 bits (2119), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 411/774 (53%), Positives = 527/774 (68%), Gaps = 12/774 (1%)

Query: 56  VEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQ 115
           V W A KVRDTF+ +F+ KNH    SSPVVP +DPTLLFANAGMNQ+K IFLGT DP ++
Sbjct: 9   VIWNANKVRDTFYDYFKSKNHTFISSSPVVPYDDPTLLFANAGMNQFKSIFLGTVDPTSK 68

Query: 116 LSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELL 175
           L  L RA N+QKCIRAGGKHNDL+DVGKD+YHHT+FEMLGNWSFGDYFKN+AI ++W+LL
Sbjct: 69  LYDLKRAYNSQKCIRAGGKHNDLEDVGKDSYHHTYFEMLGNWSFGDYFKNDAIVYSWDLL 128

Query: 176 TKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTG 234
           T VY++P DRLY +YF GDE  GL PD EARDIW    +P   ++P   KDNFWEMG+ G
Sbjct: 129 TNVYKIPKDRLYVSYFEGDESQGLEPDFEARDIWRSVGVPEDHIVPGNLKDNFWEMGEEG 188

Query: 235 PCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           PCGP SEIHYDR G R+A+ LVN DDP  +EIWN+VFIQ+NR+S+  LK LPAKHVDTG+
Sbjct: 189 PCGPSSEIHYDRIGGRNASQLVNKDDPNVLEIWNLVFIQYNRDSERKLKALPAKHVDTGM 248

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL S+LQN  SNYD D+F  IF  IQ  T AR Y+GK G  D D VD AYRV+ADH 
Sbjct: 249 GFERLVSVLQNVNSNYDIDLFTKIFKRIQAITNAREYTGKFGKYDVDGVDTAYRVLADHA 308

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVF 413
           RTL+FA+ DG  P NEGR YV+RRILRR  RY  + +    G FF+ L+  V++    +F
Sbjct: 309 RTLTFALTDGCIPNNEGRGYVIRRILRRGARYARKYMNYSIGDFFSKLIPQVIEENKSIF 368

Query: 414 PELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQD---VQGKVLSGQDAFILWDTYG 470
           PE+ +   +I+EI+  EEASF KTL +G + F+K A D   +  K L G   + L+DTYG
Sbjct: 369 PEVSKDFNYIKEILDEEEASFAKTLDRGEKLFEKYASDASKLDSKTLDGLQVWRLYDTYG 428

Query: 471 FPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGV 530
           FP+DLT+LMA+E GL +D+ GF  A  ++ E S+ A  K       +D    + L+   V
Sbjct: 429 FPVDLTELMAQELGLNIDVPGFERAKKDSYEASKRASKKYDIDLFKLDVHDISKLNTDAV 488

Query: 531 LATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGN-EVGIVLASSSFYAEQGGQIFDEG 589
             T+D  K+    D  + +  I+ GSEF++     + + G++L  + FYAEQGGQI+D G
Sbjct: 489 PKTNDKDKY-ETTDVMATVLRIHDGSEFLDVAADKDKKYGVILDKTCFYAEQGGQIYDNG 547

Query: 590 --FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTC 647
              I+G    F V NVQ + G+++HIG+L +  G+ S  ++V+   D  RR  I  NHT 
Sbjct: 548 KLIIDGK-TEFNVENVQEFNGYILHIGTLMD--GKLSTNDKVVASFDELRRFPIRNNHTG 604

Query: 648 THMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDV 707
           TH+LNFALR+VLG  V+QKGS+V PEK RFDFSH KP+  + ++ IE I +  I ++  V
Sbjct: 605 THILNFALRDVLGKDVEQKGSLVTPEKFRFDFSHKKPLTLDEIKEIEMICDTLIVSKKPV 664

Query: 708 FSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGT 767
           F K   L EAK I+ +RAVFGE YPDPVRVV+IG+ VE +L DP        S E CGGT
Sbjct: 665 FYKNVQLNEAKRISSIRAVFGESYPDPVRVVSIGQPVEKILEDPTETNSSEFSIEFCGGT 724

Query: 768 HLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKI 821
           H++NT + +  A++ E GIAKGIRRITAVT   A+ A   A     E+DD + +
Sbjct: 725 HVANTEDIQKLAIIEETGIAKGIRRITAVTGPEAFNAQRIAEQFNGELDDLNSL 778


>gi|358387653|gb|EHK25247.1| hypothetical protein TRIVIDRAFT_72371 [Trichoderma virens Gv29-8]
          Length = 954

 Score =  819 bits (2115), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 453/957 (47%), Positives = 605/957 (63%), Gaps = 50/957 (5%)

Query: 58  WPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLS 117
           WP  +VR TFF FFE ++H    S  VVP NDPTLLF NAGMNQ+KPIFLGT + +  +S
Sbjct: 5   WPEAQVRKTFFDFFEQRDHTLVPSGSVVPHNDPTLLFTNAGMNQFKPIFLGTVNKSDPMS 64

Query: 118 KLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTK 177
            L RA +TQK IRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK EAIE AWELLTK
Sbjct: 65  NLKRAVDTQKVIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIEMAWELLTK 124

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPC 236
           VY L   RLY TYF G+    L PD EA++ WLK  +P   ++P   KDNFWEMGD GPC
Sbjct: 125 VYGLDPTRLYVTYFEGNPALNLEPDLEAKNFWLKTGVPEDHIIPGNMKDNFWEMGDQGPC 184

Query: 237 GPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGF 296
           GPCSE+HYD+ G R+AASLVN DDP  +EIWN+VF+QF+R+ DGSLKPLPAKH+DTG+GF
Sbjct: 185 GPCSEVHYDKIGGRNAASLVNMDDPMVVEIWNLVFMQFDRQKDGSLKPLPAKHIDTGMGF 244

Query: 297 ERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRT 356
           ERL S LQN  SNY TDVF P+F  I++ TGARPY+ K G DD D +D AYRVVADHIRT
Sbjct: 245 ERLVSALQNTASNYATDVFTPLFKKIEEVTGARPYTDKYGQDDVDGIDTAYRVVADHIRT 304

Query: 357 LSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFPE 415
           +SFAI DG+ P N+GR YV+RRILRR VRY  + L A+ G FF+ ++  +V+ MG+ FP+
Sbjct: 305 MSFAITDGAVPNNDGRGYVIRRILRRGVRYARKYLNAEIGSFFSKILPALVEQMGEQFPD 364

Query: 416 LKQREAHIREIIAAEEASFGKTLLKGIEKFK----KAAQDVQGKVLSGQDAFILWDTYGF 471
           L +++  I+EI+  EE +F +TL +G  +F+    KAA+D   K L G   + L+DT+GF
Sbjct: 365 LAKKQGDIKEILDEEEEAFSRTLDRGEAQFERYAAKAAKD-NVKKLEGDVVWRLYDTFGF 423

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR-GV 530
           P+DLT+LMAEERGL +D +    A ++ARE S++ ++     A  +D    A L     V
Sbjct: 424 PVDLTKLMAEERGLDIDEDEVAVAREKAREASKAVKDSVQTFA-KLDVHKIAELDSELKV 482

Query: 531 LATDDSFKFIWFQDHKSVIKAIYTGSEFIESV--VPGNE-VGIVLASSSFYAEQGGQIFD 587
             T+D  K++   D K  ++ I+ G  FI+S   +P N  +G++L  ++FYAE GGQI D
Sbjct: 483 PRTNDDAKYLR-GDSKGKVQYIFDGKAFIKSTKDIPANTAIGVLLDKTNFYAESGGQIAD 541

Query: 588 EG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            G   I+ +   F V +VQ +GG+V+H G +  G    S  +EVIC+ +  RR  I  NH
Sbjct: 542 TGRIVIDDVV-EFKVMDVQDFGGYVLHSGYIEYGV--LSTDDEVICEYEELRRSPIRNNH 598

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           T TH+LN +LREVLGD V+QKGS+V  +KLRFDFSH   V  + L++IE + N+ I+A  
Sbjct: 599 TGTHILNHSLREVLGDDVNQKGSLVDNDKLRFDFSHKTQVKLDELKKIEELSNKYIRANS 658

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            ++SKE  L  A  I GLRAVFGE YP+PVRVV+IG  V+ ++ADP N EW   S E CG
Sbjct: 659 KIYSKEVELDLAIKIEGLRAVFGETYPNPVRVVSIGMDVDTMVADPTNAEWRKYSVEFCG 718

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------- 815
           GTH+  T   +   ++ E GIAKGIRRI A T   A++    A   E+++          
Sbjct: 719 GTHVDQTGLIKDLIIVEESGIAKGIRRIIAYTGEAAHQVQREAQLFEQKLVDLENLPFGP 778

Query: 816 ----------DDASKIEGSLLEKNQVRKAQKKVA------EENLQKA-VKVATETAEAAA 858
                      D S++  S L K++  +  +K+A      ++  QKA  K A +T     
Sbjct: 779 EKEAQVKAVSQDLSQLVISTLTKDEFNQRFQKIANAVVAEQKKKQKAESKTAVDTVAKHF 838

Query: 859 SNGK--PFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSD 916
              K   + + R+ +  +A AV E V+K  + K     V+    +  +  V  GV   + 
Sbjct: 839 ETNKDSQWFVGRLPISANAKAVGE-VIKHYQSKDKAKSVYLFVGSHEEGAVAHGVYVGTH 897

Query: 917 QSKQ-LEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKLR 972
            + Q +    W  +  + + GR G GK     GQGT   ++  A++ A ++ + KL+
Sbjct: 898 LASQGVTAEHWAASVSEVIGGRSG-GKEPSRQGQGTQPEKIDDAVETARKWLSEKLK 953


>gi|75858922|ref|XP_868801.1| hypothetical protein AN9419.2 [Aspergillus nidulans FGSC A4]
 gi|40747680|gb|EAA66836.1| hypothetical protein AN9419.2 [Aspergillus nidulans FGSC A4]
          Length = 981

 Score =  818 bits (2113), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 461/975 (47%), Positives = 610/975 (62%), Gaps = 74/975 (7%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           +W +  VRDTF ++F+ K H    SSPV P++DPTLLF NAGMNQ+K IFLGT +PN+  
Sbjct: 10  KWTSKLVRDTFLQYFQGKGHTFVASSPVAPLSDPTLLFTNAGMNQFKSIFLGTVNPNSDF 69

Query: 117 SKLTRACNTQK--CIRAGGKHN------------------DLDDVGKDTYHHTFFEMLGN 156
           ++L  A N+QK  CIRAGGKHN                  DLDDVGKD+YHHTFFEMLGN
Sbjct: 70  AQLKSAVNSQKMQCIRAGGKHNVGWHPVQAGQVFANICEQDLDDVGKDSYHHTFFEMLGN 129

Query: 157 WSFGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPA 215
           WSFGDYFK EAI+++WELLT+VY L   RLY TYF G+++ GL PD EA+ +W    +P 
Sbjct: 130 WSFGDYFKKEAIQYSWELLTQVYGLDPGRLYVTYFEGNKEGGLQPDLEAKALWKAVGVPE 189

Query: 216 SRVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFN 275
             +LP   KDNFWEMGD GPCGPCSEIHYDR G R+AASLVN DDP  +EIWN VFIQ+N
Sbjct: 190 DHILPGNMKDNFWEMGDQGPCGPCSEIHYDRIGGRNAASLVNQDDPNVLEIWNNVFIQYN 249

Query: 276 RESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKV 335
           RE+DGSL+ LP KHVDTG+GFERL S+LQ+K SNYDTDVF PIF  IQ  TGAR Y G+ 
Sbjct: 250 RENDGSLRSLPNKHVDTGMGFERLVSVLQDKSSNYDTDVFGPIFQTIQVITGAREYQGRF 309

Query: 336 GADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQD 395
           G DD+D +D AYRVVADH+RTL FAI+DG  P NEGR YV+RR+LRR  RY  +    + 
Sbjct: 310 GTDDSDGIDTAYRVVADHVRTLMFAISDGVVPNNEGRGYVIRRVLRRGARYARKYFNVEI 369

Query: 396 G-FFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ- 453
           G FF+ +V  VV+ +GD+FPELKQ++  + EI+  EE SF KTL +G  +F++ AQ  + 
Sbjct: 370 GSFFSKIVPTVVEQLGDMFPELKQKQQDVIEILNEEEISFAKTLDRGERQFEQYAQQAKT 429

Query: 454 --GKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQA 511
                L G D + L+DT+GFP+DLT++MAEERGL +D   F  A  +A+E S+  Q K  
Sbjct: 430 AGDHKLHGADVWRLYDTFGFPVDLTRIMAEERGLEIDDRQFEEARHKAKEASK-GQKKTT 488

Query: 512 GGAIVMDADATAALHK-RGVLATDDSFKFIWFQDHKSVIKAIYTGSEF---IESVVPGNE 567
            G++ +D      L K  GV  TDDS KF    +  + IKAIY G  F    +++    +
Sbjct: 489 TGSVKLDVHDLGKLEKMNGVPKTDDSAKF-EIGNVTAQIKAIYHGKTFHSSTQNLDDSEQ 547

Query: 568 VGIVLASSSFYAEQGGQIFDEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSV 625
           +GI+L  ++FYAEQGGQ  D G   I+G      V +VQ Y G+V+H G +  G+  F V
Sbjct: 548 IGIILDRTNFYAEQGGQENDTGRIVIDGQ-AELEVVDVQQYAGYVLHTGYMKYGS--FKV 604

Query: 626 GEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPV 685
            + VIC+ D  RR  I  NHT TH+LNFALR VLGD ++QKGS+V  EKLRFDFSH  PV
Sbjct: 605 DDTVICEYDELRRWPIRNNHTGTHILNFALRGVLGDGIEQKGSLVSAEKLRFDFSHKSPV 664

Query: 686 DPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVE 745
               L +IE +  + I+    V+SKE  L+ A+ I G+RAVFGE YPDPVRVV++G +++
Sbjct: 665 TDVELVKIEDLSTQYIRRNCLVYSKEVPLSIARNIAGVRAVFGETYPDPVRVVSVGAELD 724

Query: 746 DLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAF 805
           ++L + E+  W   S E CGGTH+  T + +   +L E GIAKGIRRI AVT   A++  
Sbjct: 725 EILKNVEDPRWADFSIEFCGGTHVQKTGDIKDLVILEESGIAKGIRRIIAVTGEDAHEVQ 784

Query: 806 EAACSLEKEVD-------------DASKIEGSL-------LEKNQVR----KAQKKVAEE 841
             A   EK ++             +A +I+  L       ++K++ R    +  KK+ +E
Sbjct: 785 RLAEEFEKRLNHLEAMPSGSAKEQNAKQIQVELNQLSISAVQKSRFRERFTQINKKIIDE 844

Query: 842 NL-------QKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVM 894
                    +KAV+  T    A  +  K + I+++ +  +A AV E  L  ++ K    M
Sbjct: 845 QKAQQKLESKKAVESITSYFAAPENANKSWLIAKLPISANAKAVSEC-LTYVKTKLADKM 903

Query: 895 VFSTDETTNKAVVCAG--VPEK-SDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGT 951
           V+    +     V  G  VP+  SDQ      SEW ++A+    G    GKG  + G G 
Sbjct: 904 VYVLASSLEDGRVAHGCYVPKAISDQGA--SASEW-SSAVSRAVGGKAGGKGPTSIGNGI 960

Query: 952 DAAQVTPAMDLAAEF 966
           +  +V  A+DLA+E+
Sbjct: 961 NPEKVDDAVDLASEY 975


>gi|146086823|ref|XP_001465654.1| putative alanyl-tRNA synthetase [Leishmania infantum JPCM5]
 gi|398015391|ref|XP_003860885.1| alanyl-tRNA synthetase, putative [Leishmania donovani]
 gi|134069753|emb|CAM68079.1| putative alanyl-tRNA synthetase [Leishmania infantum JPCM5]
 gi|322499108|emb|CBZ34180.1| alanyl-tRNA synthetase, putative [Leishmania donovani]
          Length = 962

 Score =  817 bits (2111), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 434/942 (46%), Positives = 585/942 (62%), Gaps = 58/942 (6%)

Query: 56  VEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQ 115
            EWP ++VR  F  +F+ + H    SSPV P +DPTLLF NAGMNQ+K +FLGTADPNT 
Sbjct: 4   TEWPVSRVRQEFVDYFKKQGHTFVPSSPVCPHDDPTLLFINAGMNQFKALFLGTADPNTD 63

Query: 116 LSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELL 175
             +L RA N+Q CIRAGGKHNDL+DVG+DTYHHTFFEMLG+WSFGDYFK EAI+WAWELL
Sbjct: 64  FGRLKRAANSQMCIRAGGKHNDLEDVGRDTYHHTFFEMLGSWSFGDYFKKEAIQWAWELL 123

Query: 176 TKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGP 235
           T+VY+LP D+LY TYF GDE  GL PD EA+++W +FLP S+++P   KDNFWEMGDTGP
Sbjct: 124 TEVYKLPKDQLYVTYFEGDENNGLDPDLEAKELWGQFLPESQIVPGNAKDNFWEMGDTGP 183

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPCSE+H+DR G R+AASLVN DDP  +EIWN+VF+QF R + GSL PLP KH+DTG+G
Sbjct: 184 CGPCSEVHFDRIGGRNAASLVNKDDPMVVEIWNLVFMQFERRAGGSLTPLPQKHIDTGMG 243

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
            ERLTSILQ   SNYDTD ++P+F+AIQ ATG      ++  D      +AYRVVADHIR
Sbjct: 244 LERLTSILQGVKSNYDTDAWIPLFEAIQTATGYPKSYAEIRNDPDSDALVAYRVVADHIR 303

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPE 415
            L+ A+ DG  P + GR +VLRRI+RRAVRYG + L A+ GFF  LV+ V   +G  FP 
Sbjct: 304 CLTSAVGDGVMPDSVGRGFVLRRIIRRAVRYGVQFLGAKPGFFTQLVDSVCTSLGPFFPH 363

Query: 416 LKQRE--AHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG---KVLSGQDAFILWDTYG 470
           LK+      I+ ++A EE SF KT   G++ F  A  + +    KV+SG +AF+L D YG
Sbjct: 364 LKEPRNIQRIKTVLADEEQSFAKTWEMGLKHFNHAVNECRANNSKVISGSEAFVLHDRYG 423

Query: 471 FPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGV 530
           FP+DLT L+AE+ G+ VD+EGFN  M E    S+ +  + A     +DA     L  RG+
Sbjct: 424 FPVDLTCLLAEKDGMTVDLEGFNAEMKE----SKVSAGRVAATKTFIDAYQLEELKTRGI 479

Query: 531 LATDDSFKFIWFQDHKSVIKAIY--TGSEFIESVVPGNE-----VGIVLASSSFYAEQGG 583
             TDD+ K++W +D    + AI+    S+FI  + PGN+     VGI+L++++FYAE GG
Sbjct: 480 PQTDDAAKYVW-EDSTGDLLAIFDKKNSKFISLLEPGNDLGAEGVGIILSTTNFYAESGG 538

Query: 584 QIFDEGFIEGLFGS-FYVRNVQIYGGFVIHIGSLT-EGAGRFSVGEEVICKVDYDRRKLI 641
           Q++D G +     S F V+ V    G+V+H+G+L+ + A        V  +VDY+RR  I
Sbjct: 539 QVYDTGRLVAASDSVFEVKKVYNVAGYVVHVGNLSKDSASSIPSSAVVQLQVDYERRLPI 598

Query: 642 APNHTCTHMLNFALREVLGD------HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIES 695
           A NHT TH LN+ LR VLG+       V QKGS+V  E LRFDFS+   +  E L R+E 
Sbjct: 599 AANHTTTHQLNWVLRRVLGEKPDNFTEVQQKGSLVTDEMLRFDFSYNTKLSNEDLVRVER 658

Query: 696 IVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKE 755
           ++NE+I+A L V+ +E  L  A  INGLR +FGE YPDPV V++IG  + ++LA+PE +E
Sbjct: 659 LLNEKIQAGLPVYREEVPLEAASKINGLRHMFGEKYPDPVSVISIGTPINEMLANPEKEE 718

Query: 756 WLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV 815
           W   + E CGGTHL N +EAE   ++SEE + KG+RR+   T   A K  +A   L+ + 
Sbjct: 719 WRDYAVEFCGGTHLKNLKEAEKAVIISEEALMKGVRRVVVATKSEADKVIKAGAVLKGQY 778

Query: 816 DDASKIEGSLLEKNQVRKAQKKVAE------------ENLQKAVK-----VATETAEA-- 856
           D+  K E +      +    KKV +            +N+  A+K     + ++ AEA  
Sbjct: 779 DELMKKEATATSVKALSVLNKKVGDSCIPLVLKNEMRDNIDAAIKRMNATLKSQAAEARD 838

Query: 857 -AASNGK-----------PFCISRV-EVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTN 903
            AA  GK           PF + ++ E G +  A++            PV VF       
Sbjct: 839 KAAEAGKALGASYDAAAAPFLVHQMTEFGAEREALQAFSDGFTSTVSGPVGVFLIGSDDE 898

Query: 904 KAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGL 945
           KA+    +P    + K   V+ W  +++    G+    + GL
Sbjct: 899 KALAIVSMPAAFVERKMSAVA-WAKSSIGKGGGKPNAAQSGL 939


>gi|322712022|gb|EFZ03595.1| alanyl-tRNA synthetase [Metarhizium anisopliae ARSEF 23]
          Length = 952

 Score =  816 bits (2109), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 446/958 (46%), Positives = 597/958 (62%), Gaps = 51/958 (5%)

Query: 56  VEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQ 115
           ++WP+  VR  FF + + + H    S  VVP +DPTLLF NAGMNQ+KPIFLGT + +  
Sbjct: 4   LKWPSALVRKAFFDYMQQRGHTIVPSGSVVPYDDPTLLFTNAGMNQFKPIFLGTINQSDP 63

Query: 116 LSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELL 175
           ++ L RA +TQK IRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK EAIE AWE+L
Sbjct: 64  MANLKRAADTQKVIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIEMAWEIL 123

Query: 176 TKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTG 234
           TKVY L   RLYATYF G+++ GL PD+EA+ +WL   +P  +++P   KDNFWEMGD G
Sbjct: 124 TKVYGLDPKRLYATYFEGNKELGLPPDDEAKQLWLDIGMPEDQIVPGDMKDNFWEMGDQG 183

Query: 235 PCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           PCGP SEIHYD+ G R+AA +VN DDP  +EIWN+VF+QF+R+ DGSLKPLPAKH+DTG+
Sbjct: 184 PCGPSSEIHYDKIGGRNAAHIVNQDDPMVVEIWNLVFMQFDRQKDGSLKPLPAKHIDTGM 243

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFER+ S LQ   SNY TD F P+F  IQ+ TG RPYS K G DDAD +D AYRV+ADHI
Sbjct: 244 GFERMVSALQETDSNYATDCFTPLFKQIQEVTGVRPYSDKYGKDDADGIDTAYRVIADHI 303

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVF 413
           RTLSFAI DG+ P ++GR YV+RRILRR VRY  + L A+ G FF+ ++  +V  MGD F
Sbjct: 304 RTLSFAITDGAVPNSDGRGYVIRRILRRGVRYARKYLNAEIGSFFSKILPALVSHMGDQF 363

Query: 414 PELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW---DTYG 470
           PEL +++  I+EI+  EE +F +TL +G  +F+K A       +   D  ++W   DT+G
Sbjct: 364 PELVKKQLDIKEILDEEEEAFARTLDRGEAQFEKYAAKAAKAGVKKLDGDVVWRLYDTFG 423

Query: 471 FPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGV 530
           FP+DLTQ+MAEERGL +D    + A ++ARE S++ +      A  +D    A L ++ V
Sbjct: 424 FPVDLTQIMAEERGLEIDESEVSVAKEKAREASKAVKASVDTFA-KLDVHQIAQLDQQKV 482

Query: 531 LATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNE---VGIVLASSSFYAEQGGQIFD 587
             TDD  KF+   D K  ++ I+ G  F  S     E   +GI+L  ++FYAE GGQ+ D
Sbjct: 483 ARTDDDAKFVK-GDSKGKVQLIFDGKTFHNSTKELPEKTAIGILLDKTNFYAESGGQVAD 541

Query: 588 EG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            G   I+ +   F V +VQ YGGF++H G +  GA   S G+EVIC+ D  RR  I  NH
Sbjct: 542 TGRIVIDDVV-EFKVMDVQNYGGFILHSGYIEYGA--LSSGDEVICEYDELRRSPIRNNH 598

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           T TH+LN +LREVLGD ++QKGS+V  EKLRFDFSH   V  E LR+IE++ NE I+   
Sbjct: 599 TGTHVLNHSLREVLGDDINQKGSLVDNEKLRFDFSHKSQVKIEELRKIETLSNEYIRRNS 658

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            +FSK+  L  A+ I G+RAVFGE YP+PVRVV+IG  V+ +L DP+ +EW   S E CG
Sbjct: 659 KIFSKDVDLDLARQIEGVRAVFGETYPNPVRVVSIGMDVDTMLKDPKKQEWRQYSVEFCG 718

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVD--------- 816
           GTH+  T   +   L+ E GIAKGIRRI A T   A++    A    K++D         
Sbjct: 719 GTHVEQTGLIKDLILVEESGIAKGIRRIIAYTGEAAHQVQREAAEFSKKLDILEAMPFGP 778

Query: 817 -----------DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNG---- 861
                      + S++  S L K+++    +K+A   + +  K   + AEA A+ G    
Sbjct: 779 AKDAQTKVVSQELSQLVISTLTKDELNTRFQKIATSVIAEQKK--RQKAEAGAAVGCVIK 836

Query: 862 -------KPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEK 914
                    + + R+ +  +A A+ E V K  + K     V+    +  +  V  GV   
Sbjct: 837 HFEEKEDVDYFVGRLPISANAKALTE-VFKHFQAKDKTKSVYIFGGSQEEGAVVHGVYVG 895

Query: 915 SD-QSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           S   SK +   +W +     + GR G GK     GQGT    +  A+++A ++   KL
Sbjct: 896 SGLASKGVTAEQWASVVSDVVGGRSG-GKEPTRQGQGTKPENIDDAVEVARKWLEEKL 952


>gi|401422240|ref|XP_003875608.1| putative alanyl-tRNA synthetase [Leishmania mexicana
           MHOM/GT/2001/U1103]
 gi|322491846|emb|CBZ27119.1| putative alanyl-tRNA synthetase [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 962

 Score =  816 bits (2108), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 439/962 (45%), Positives = 593/962 (61%), Gaps = 72/962 (7%)

Query: 56  VEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQ 115
            EWP ++VR  F  +F+ + H     SPV P +DPTLLF NAGMNQ+K +FLGTADPNT 
Sbjct: 4   TEWPVSRVRQEFVDYFKKQGHTFVPGSPVCPHDDPTLLFINAGMNQFKALFLGTADPNTD 63

Query: 116 LSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELL 175
             +L RA N+Q CIRAGGKHNDL+DVG+DTYHHTFFEMLG+WSFGDYFK EAI+WAWELL
Sbjct: 64  FGRLKRAANSQMCIRAGGKHNDLEDVGRDTYHHTFFEMLGSWSFGDYFKKEAIQWAWELL 123

Query: 176 TKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGP 235
           T+VY+LP D+LY TYF GD+  GL PD EA+++W +FLP S+++P   KDNFWEMGDTGP
Sbjct: 124 TEVYKLPKDQLYVTYFEGDKNNGLNPDLEAKELWAQFLPESQIVPGNAKDNFWEMGDTGP 183

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPCSE+H+DR G R+AAS VN DDP  +EIWN+VF+QF R +DG L PLP KH+DTG+G
Sbjct: 184 CGPCSEVHFDRIGGRNAASFVNKDDPMVVEIWNLVFMQFERRADGFLTPLPQKHIDTGMG 243

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATG-ARPYSGKVGADDADKVDMAYRVVADHI 354
            ERLTSILQ   SNYDTD ++P+F+AIQ ATG  + Y+      D+D + +AYRVVADHI
Sbjct: 244 LERLTSILQGVKSNYDTDAWIPLFEAIQTATGYPKSYAEIRNNPDSDAL-VAYRVVADHI 302

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R L+ A+ DG  P + GR +VLRRI+RRAVRYG + L A+ GFF  LV+ V   +G  FP
Sbjct: 303 RCLTSAVGDGVMPDSVGRGFVLRRIIRRAVRYGVQFLGAKPGFFTQLVDSVCTSLGPFFP 362

Query: 415 ELKQRE--AHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG---KVLSGQDAFILWDTY 469
            LK+      I+ ++A EE SF KT   G+  F  A  + +    KV+SG +AF+L D Y
Sbjct: 363 HLKEPRNIQRIKAVLADEEQSFAKTWEMGLRHFNHAVNECRANNSKVISGSEAFVLHDRY 422

Query: 470 GFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRG 529
           GFP+DLT L+AE+ G+ VD+EGFN  M E    S+ +  + A     +DA     L  RG
Sbjct: 423 GFPVDLTCLLAEKDGMTVDLEGFNAEMKE----SKVSAGRVAATKTFIDAYQLEELKTRG 478

Query: 530 VLATDDSFKFIWFQDHKSVIKAIY--TGSEFIESVVPGNE-----VGIVLASSSFYAEQG 582
           +  TDD  K++W +D    + AI+    S+FI  + PGN+     VGI+L +++FYAE G
Sbjct: 479 IPQTDDVAKYVW-EDSTGDVLAIFDKKNSKFISLLEPGNDLGAEGVGIILNTTNFYAESG 537

Query: 583 GQIFDEG-FIEGLFGSFYVRNVQIYGGFVIHIGSLT-EGAGRFSVGEEVICKVDYDRRKL 640
           GQ++D G  + G    F V+ V    G+V+H+GSL+ + A    +   V  +VDY+RR  
Sbjct: 538 GQVYDTGRLVAGSDSVFEVKKVYNVAGYVVHVGSLSKDSASPIPLSAVVQMQVDYERRLP 597

Query: 641 IAPNHTCTHMLNFALREVLGD------HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIE 694
           IA NHT TH LN+ LR VLG+       V QKGS+V  E LRFDFS+   +  E L R+E
Sbjct: 598 IAANHTTTHQLNWVLRRVLGEKPDNFTEVQQKGSLVTDEMLRFDFSYSTKLSNEELVRVE 657

Query: 695 SIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENK 754
            ++NE+I+A L V+ +E  L  A  INGLR +FGE YPDPV V++IG  + ++L +PE +
Sbjct: 658 QLLNEKIQAGLPVYREEVPLEAASKINGLRQMFGEKYPDPVSVISIGTPINEMLTNPEKE 717

Query: 755 EWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKE 814
           EW   + E CGGTHL N +EA+   ++SEE + KG+RR+   T   A K  +A   L+ +
Sbjct: 718 EWRDYAVEFCGGTHLKNLKEADKAVIISEEALMKGVRRVVVATKSEADKVIKAGTELKGQ 777

Query: 815 VDDASKIEGSLLEKNQVRKAQKKVAE------------ENLQKAVK-----VATETAEA- 856
            D+  + E +      +    KKV +            +N+  A+K     + ++ AEA 
Sbjct: 778 YDELMQKEATATSVKALSVLNKKVGDSCIPLVLKNEMRDNIDAAIKRMNAILKSQAAEAR 837

Query: 857 --AASNGK-----------PFCISRV-EVGLDAAAVREAVLKVIEQKGMPVMVFSTDETT 902
             AA  GK           PF + ++ E G +  A++            PV VF      
Sbjct: 838 DKAAEAGKALGASYDAAAAPFLVHQMTEFGAEREALQAFSDGFSSTVSGPVGVFLIGSDD 897

Query: 903 NKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDL 962
            KA+    +P    + K   V+ W  +++         GKGG   G+ + A    PA D+
Sbjct: 898 EKALAIVSMPAAFVEKKMSAVA-WAKSSI---------GKGG---GKPSAAQSGLPAKDV 944

Query: 963 AA 964
           AA
Sbjct: 945 AA 946


>gi|121719583|ref|XP_001276490.1| alanyl-tRNA synthetase, putative [Aspergillus clavatus NRRL 1]
 gi|119404702|gb|EAW15064.1| alanyl-tRNA synthetase, putative [Aspergillus clavatus NRRL 1]
          Length = 961

 Score =  816 bits (2107), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 433/868 (49%), Positives = 571/868 (65%), Gaps = 47/868 (5%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           EW A +VRDTF  FF    H    SSPVVP +DPTLLF NAGMNQ+K IFLGT DP++  
Sbjct: 10  EWTARRVRDTFLDFFRKNGHTFVPSSPVVPHSDPTLLFTNAGMNQFKSIFLGTVDPHSDF 69

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
           ++L  A N+QKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK +AI ++WELLT
Sbjct: 70  ARLKSAVNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKEDAIRYSWELLT 129

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
           KVY +   RLY TYF G E+ GL PD EA+ +W    +P   +LP   KDNFWEMGD GP
Sbjct: 130 KVYGIDPQRLYVTYFEGHEEGGLEPDLEAKALWTAVGVPEDHILPGNMKDNFWEMGDQGP 189

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPCSEIHYDR G R+A+ LVN DDP  +EIWN VFIQ+NRE+D +L+PLP KHVDTG+G
Sbjct: 190 CGPCSEIHYDRIGGRNASHLVNQDDPNVLEIWNNVFIQYNRETDRTLRPLPNKHVDTGMG 249

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
           FERL S+LQ+K SNYDTDVF P+F AI+  TGAR Y G  G+ DAD +D AYRVVADH+R
Sbjct: 250 FERLVSVLQDKSSNYDTDVFSPLFGAIKDITGAREYRGMFGSGDADGIDTAYRVVADHVR 309

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFP 414
           TL+FAI+DG  P ++GR YV+RR+LRR  RY  +  + + G FF+ LV I+V  +G++FP
Sbjct: 310 TLTFAISDGVTPNSDGRGYVVRRVLRRGARYARKYFQVEIGNFFSKLVPILVDQLGEMFP 369

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK---VLSGQDAFILWDTYGF 471
           EL++++  + EI+  EE SF KTL +G  +F+  AQ  + K    L G D + L+DT+GF
Sbjct: 370 ELRKKQQDVMEILDEEEISFAKTLDRGERQFESYAQQAKLKGNDKLHGADVWRLYDTFGF 429

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRG-V 530
           P+DLT+LMAEERGL +D   F  A  +A+E S+  Q K A   + +D      L K   V
Sbjct: 430 PVDLTRLMAEERGLKIDDTEFEEARLKAKEASK-GQKKSATDTVKLDVHDLGKLEKMNDV 488

Query: 531 LATDDSFKFIWFQDHKSVIKAIYTGSEFIES---VVPGNEVGIVLASSSFYAEQGGQIFD 587
             TDDSFKF    +  + +KAIY G  F      +  G ++GI+L  ++FYAEQGGQ  D
Sbjct: 489 PKTDDSFKF-EMCNINAEVKAIYHGKVFHSDTAVISAGEQIGIILDRTNFYAEQGGQEND 547

Query: 588 EG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            G   I+G      V +VQ+Y G+V+H G +  G+  FSVG+ V+C+ D  RR  I  NH
Sbjct: 548 IGRIIIDGK-AELEVSDVQLYAGYVLHTGFMKYGS--FSVGDTVLCEYDELRRWPIRNNH 604

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           T TH+LNFAL+ VLGD V+QKGS+V  EKLRFDFSH   V  + L RIE I  E I+   
Sbjct: 605 TGTHILNFALKRVLGDSVEQKGSLVAAEKLRFDFSHKSAVTEKELERIEDISTEYIRQNC 664

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
           DV+S+E  LA A+ I G+RAVFGE YPDPVRVV++G +VE++L + ++  W  +S E CG
Sbjct: 665 DVYSQEVPLATARQITGVRAVFGETYPDPVRVVSVGVEVEEILQNVKDPRWNEVSIEFCG 724

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVD--------- 816
           GTH+  T + +   +L E GIAKGIRRI AVT   A++  + A    K +D         
Sbjct: 725 GTHVQKTGDIKDLVILEESGIAKGIRRIIAVTGEDAHRVQQVATDFAKRLDRLDAMPLGP 784

Query: 817 -----------DASKIEGSLLEKNQVRK-----------AQKKVAEENLQKAVKVATETA 854
                      + +++  S ++K+++R+            QK + +   +KA+   T   
Sbjct: 785 QKEQEAKQVQVELNQLSISAVQKSRLRERFAAINKKVIDGQKSLQKLESKKALDAITSYF 844

Query: 855 EAAASNGKPFCISRVEVGLDAAAVREAV 882
           EA  ++ K + ++R+ +  +A AV E++
Sbjct: 845 EAPENSEKSWLVTRLPISANAKAVSESL 872


>gi|70983336|ref|XP_747195.1| alanyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|66844821|gb|EAL85157.1| alanyl-tRNA synthetase, putative [Aspergillus fumigatus Af293]
          Length = 1011

 Score =  815 bits (2104), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 444/870 (51%), Positives = 576/870 (66%), Gaps = 53/870 (6%)

Query: 58  WPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLS 117
           W A +VRDTF  +F    H    SSPVVP++DPTLLF NAGMNQ+K IFLGT DP +  +
Sbjct: 61  WTAKRVRDTFLDYFRQNGHTFVPSSPVVPLSDPTLLFTNAGMNQFKSIFLGTVDPQSDFA 120

Query: 118 KLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTK 177
           KL  A N+QKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK +AI ++WELLTK
Sbjct: 121 KLKSAVNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKEDAIRYSWELLTK 180

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPC 236
           VY L   RLY TYF G E+ GL PD EA+ +W    +P   +LP   KDNFWEMGD GPC
Sbjct: 181 VYGLDPQRLYVTYFEGHEEGGLEPDLEAKALWRAAGVPEDHILPGNMKDNFWEMGDQGPC 240

Query: 237 GPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGF 296
           GPCSEIHYDR G R+AA LVN DDP  +EIWN VFIQ+NRESD SL+PLP KHVDTG+GF
Sbjct: 241 GPCSEIHYDRIGGRNAAHLVNQDDPNVLEIWNNVFIQYNRESDRSLRPLPNKHVDTGMGF 300

Query: 297 ERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRT 356
           ERL S+LQ+K SNYDTDVF P+F+AI+  TGAR Y G+ GADD+D +D AYRVVADH+RT
Sbjct: 301 ERLVSVLQDKSSNYDTDVFSPLFNAIKNITGAREYRGRFGADDSDGIDTAYRVVADHVRT 360

Query: 357 LSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFPE 415
           L+FAI+DG  P ++GR YV+RR+LRR  RY  +  + + G FF+ +V  +V+ +GD+FPE
Sbjct: 361 LTFAISDGVTPNSDGRGYVVRRVLRRGARYARKYFQVEIGNFFSKIVPTLVEQLGDMFPE 420

Query: 416 LKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK---VLSGQDAFILWDTYGFP 472
           LK+++  + EI+  EE SF KTL +G  +F+  AQ  + K    L G D + L+DT+GFP
Sbjct: 421 LKKKQHDVMEILDEEEISFAKTLDRGERQFENYAQQAKIKGDDKLHGADVWRLYDTFGFP 480

Query: 473 LDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL- 531
           +DLT+LMAEERGL +D   F  A   A+E S+  Q K A G + +D      L K  V+ 
Sbjct: 481 VDLTRLMAEERGLNIDDLEFEEARLRAKEASK-GQKKSATGTVKLDVHDLGKLEKMNVVP 539

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESV--VP-GNEVGIVLASSSFYAEQGGQIFDE 588
            TDDS KF    +  + IKAIY G  F  S   +P G ++GI+L  ++FYAEQGGQ  D 
Sbjct: 540 KTDDSAKF-GKGNITAEIKAIYHGKNFHSSTAQIPDGEQIGIILDRTNFYAEQGGQENDT 598

Query: 589 G--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
           G   I+G      V +VQ+Y G+V+H G +  G+  FS+G+ V+C+ D  RR  I  NHT
Sbjct: 599 GRIIIDGR-AELEVGDVQLYAGYVLHTGFMKYGS--FSIGDAVLCEYDELRRWPIRNNHT 655

Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD 706
            TH+LNFALR VLGD V+QKGS+V  EKLRFDFSH   V  + L +IE I  E I+   D
Sbjct: 656 GTHILNFALRRVLGDSVEQKGSLVAAEKLRFDFSHKSAVTEKELEKIEEISTEYIRQNCD 715

Query: 707 VFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGG 766
           V+S+E  LA A+ I+G+RAVFGE YPDPVRVV++G +VE++L + E+  WL +S E CGG
Sbjct: 716 VYSQEVPLATARRISGVRAVFGETYPDPVRVVSVGVEVEEILKNVEDPRWLEVSIEFCGG 775

Query: 767 THLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVD---------- 816
           TH+  T + +   +L E GIAKGIRRI AVT   A++    A   EK +D          
Sbjct: 776 THVQKTGDIKDLIILEENGIAKGIRRIIAVTGEDAHEVQRVAKEFEKRLDRLDAMALGPQ 835

Query: 817 ---DASKIEGSL-------LEKNQVR--------------KAQKKVAEENLQKAVKVATE 852
              +A +I+  L       ++K++ R              KAQ+K+     +KA++    
Sbjct: 836 KEQEAKQIQVELNQLSISAVQKSRFRERFASINKQVIDGQKAQQKL---ETKKALEAIIS 892

Query: 853 TAEAAASNGKPFCISRVEVGLDAAAVREAV 882
             E+  + GK   ++R+ +  +  AV E++
Sbjct: 893 YFESPTNEGKTCLVTRLPISANPKAVSESL 922


>gi|119484060|ref|XP_001261933.1| alanyl-tRNA synthetase, putative [Neosartorya fischeri NRRL 181]
 gi|119410089|gb|EAW20036.1| alanyl-tRNA synthetase, putative [Neosartorya fischeri NRRL 181]
          Length = 961

 Score =  814 bits (2103), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 463/956 (48%), Positives = 607/956 (63%), Gaps = 54/956 (5%)

Query: 58  WPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLS 117
           W A +VRDTF  +F    H    SSPVVP++DPTLLF NAGMNQ+K IFLGT DP +  +
Sbjct: 11  WTAKRVRDTFLDYFRQNGHTFVPSSPVVPLSDPTLLFTNAGMNQFKSIFLGTVDPQSDFA 70

Query: 118 KLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTK 177
           KL  A N+QKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK +AI ++WELLTK
Sbjct: 71  KLKSAVNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKEDAIRYSWELLTK 130

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPC 236
           VY L   RLY TYF G E+ GL PD EA+ +W    +P   +LP   KDNFWEMGD GPC
Sbjct: 131 VYGLDPQRLYVTYFEGHEEGGLEPDLEAKALWRAAGVPEDHILPGNMKDNFWEMGDQGPC 190

Query: 237 GPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGF 296
           GPCSEIHYDR G R+AA LVN DDP  +EIWN VFIQ+NRESD SL+PLP KHVDTG+GF
Sbjct: 191 GPCSEIHYDRIGGRNAAHLVNQDDPNVLEIWNNVFIQYNRESDRSLRPLPNKHVDTGMGF 250

Query: 297 ERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRT 356
           ERL S+LQ+K SNYDTDVF P+F+AI+  TGAR Y G  GADD+D +D AYRVVADH+RT
Sbjct: 251 ERLVSVLQDKSSNYDTDVFSPLFNAIKNITGAREYRGMFGADDSDGIDTAYRVVADHVRT 310

Query: 357 LSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFPE 415
           L+FAI+DG  P ++GR YV+RR+LRR  RY  +  + + G FF+ +V  +V+ +GD+FPE
Sbjct: 311 LTFAISDGVTPNSDGRGYVVRRVLRRGARYARKYFQVEIGNFFSKIVPTLVEQLGDMFPE 370

Query: 416 LKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK---VLSGQDAFILWDTYGFP 472
           LK+++  + EI+  EE SF KTL +G  +F+  AQ  + K    L G D + L+DT+GFP
Sbjct: 371 LKKKQHDVMEILDEEEISFAKTLDRGERQFENYAQQAKIKGDDKLHGADVWRLYDTFGFP 430

Query: 473 LDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRG-VL 531
           +DLT+LMAEERGL +D   F  A   A+E S+  Q K A G + +D      L K   V 
Sbjct: 431 VDLTRLMAEERGLNIDDLEFEEARLRAKEASK-GQKKSATGTVKLDVHDLGKLEKMNDVP 489

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESV--VP-GNEVGIVLASSSFYAEQGGQIFDE 588
            TDDS KF    +  + IKAIY G  F  S   +P G ++GI+L  ++FYAEQGGQ  D 
Sbjct: 490 KTDDSAKF-GKGNITAEIKAIYHGKNFHSSTAQIPDGEQIGIILDRTNFYAEQGGQENDT 548

Query: 589 G--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
           G   I+G      V +VQ+Y G+V+H G +  G+  FS+G+ V+C+ D  RR  I  NHT
Sbjct: 549 GRIIIDGR-AELEVGDVQLYAGYVLHTGFMKYGS--FSIGDAVLCEYDELRRWPIRNNHT 605

Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD 706
            TH+LNFALR VLGD V+QKGS+V  EKLRFDFSH   V  + L +IE I  E I+   D
Sbjct: 606 GTHILNFALRRVLGDSVEQKGSLVAAEKLRFDFSHKSAVTEKELEKIEEISTEYIRQNCD 665

Query: 707 VFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGG 766
           V+S+E  LA A+ I+G+RAVFGE YPDPVRVV++G +VE++L + E+  WL +S E CGG
Sbjct: 666 VYSQEVPLATARQISGVRAVFGETYPDPVRVVSVGVEVEEILKNVEDPRWLEVSIEFCGG 725

Query: 767 THLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVD---------- 816
           TH+  T + +   +L E GIAKGIRRI AVT   A++    A   EK +D          
Sbjct: 726 THVQKTGDIKDLIILEENGIAKGIRRIIAVTGEDAHEVQRVAKEFEKRLDRLDAMALGPQ 785

Query: 817 ---DASKIEGSL-------LEKNQVR--------------KAQKKVAEENLQKAVKVATE 852
              +A +I+  L       ++K++ R              KAQ+K+     +KA++    
Sbjct: 786 KEQEAKQIQVELNQLSISAVQKSRFRERFASINKQVIDGQKAQQKL---ETKKALEAIIS 842

Query: 853 TAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVP 912
             E+  + GK   ++R+ +  +A AV E+ L  ++ K     V+     + +  V  G  
Sbjct: 843 YFESPTNEGKTCLVTRLPISANAKAVSES-LNYVKSKLQDKTVYVLAGDSEQGRVAHGCY 901

Query: 913 EKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAA 968
                  Q   +  L A +  + G    GKG  + G G    ++  A+ LA+++ A
Sbjct: 902 VSKALLDQGASANDLAAVVSSVVGGKAGGKGSTSIGNGVHPDKIEDAIALASDYLA 957


>gi|159123802|gb|EDP48921.1| alanyl-tRNA synthetase, putative [Aspergillus fumigatus A1163]
          Length = 1011

 Score =  813 bits (2099), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 444/870 (51%), Positives = 575/870 (66%), Gaps = 53/870 (6%)

Query: 58  WPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLS 117
           W A +VRDTF  +F    H    SSPVVP++DPTLLF NAGMNQ+K IFLGT DP +  +
Sbjct: 61  WTAKRVRDTFLDYFRQNGHTFVPSSPVVPLSDPTLLFTNAGMNQFKSIFLGTVDPQSDFA 120

Query: 118 KLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTK 177
           KL  A N+QKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK +AI ++WELLTK
Sbjct: 121 KLKSAVNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKEDAIRYSWELLTK 180

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPC 236
           VY L   RLY TYF G E+ GL PD EA+ +W    +P   +LP   KDNFWEMGD GPC
Sbjct: 181 VYGLDPQRLYVTYFEGHEEGGLEPDLEAKALWRAAGVPEDHILPGNMKDNFWEMGDQGPC 240

Query: 237 GPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGF 296
           GPCSEIHYDR G R+AA LVN DDP  +EIWN VFIQ+NRESD SL+PLP KHVDTG+GF
Sbjct: 241 GPCSEIHYDRIGGRNAAHLVNQDDPNVLEIWNNVFIQYNRESDRSLRPLPNKHVDTGMGF 300

Query: 297 ERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRT 356
           ERL S+LQ+K SNYDTDVF P+F+AI+  TGAR Y G+ GADD+D +D AYRVVADH+RT
Sbjct: 301 ERLVSVLQDKSSNYDTDVFSPLFNAIKNITGAREYRGRFGADDSDGIDTAYRVVADHVRT 360

Query: 357 LSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFPE 415
           L+FAI+DG  P ++GR YV+RR+LRR  RY  +  + + G FF+ +V  +V+ +GD+FPE
Sbjct: 361 LTFAISDGVTPNSDGRGYVVRRVLRRGARYARKYFQVEIGNFFSKIVPTLVEQLGDMFPE 420

Query: 416 LKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK---VLSGQDAFILWDTYGFP 472
           LK+++  + EI+  EE SF KTL +G  +F+  AQ  + K    L G D + L+DT+GFP
Sbjct: 421 LKKKQHDVMEILDEEEISFAKTLDRGERQFENYAQQAKIKGDDKLHGADVWRLYDTFGFP 480

Query: 473 LDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRG-VL 531
           +DLT+LMAEERGL +D   F  A   A+E S+  Q K A G + +D      L K   V 
Sbjct: 481 VDLTRLMAEERGLNIDDLEFEEARLRAKEASK-GQKKSATGTVKLDVHDLGKLEKMNDVP 539

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESV--VP-GNEVGIVLASSSFYAEQGGQIFDE 588
            TDDS KF    +  + IKAIY G  F  S   +P G ++GI+L  ++FYAEQGGQ  D 
Sbjct: 540 KTDDSAKF-GKGNITAEIKAIYHGKNFHSSTAQIPDGEQIGIILDRTNFYAEQGGQENDT 598

Query: 589 G--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
           G   I+G      V +VQ+Y G+V+H G +  G+  FS+G+ V+C+ D  RR  I  NHT
Sbjct: 599 GRIIIDGR-AELEVGDVQLYAGYVLHTGFMKYGS--FSIGDAVLCEYDELRRWPIRNNHT 655

Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD 706
            TH+LNFALR VLGD V+QKGS+V  EKLRFDFSH   V  + L +IE I  E I+   D
Sbjct: 656 GTHILNFALRRVLGDSVEQKGSLVAAEKLRFDFSHKSAVTEKELEKIEEISTEYIRQNCD 715

Query: 707 VFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGG 766
           V+S+E  LA A+ I+G+RAVFGE YPDPVRVV++G +VE++L + E+  WL +S E CGG
Sbjct: 716 VYSQEVPLATARRISGVRAVFGETYPDPVRVVSVGVEVEEILKNVEDPRWLEVSIEFCGG 775

Query: 767 THLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVD---------- 816
           TH+  T + +   +L E GIAKGIRRI AVT   A++    A   EK +D          
Sbjct: 776 THVQKTGDIKDLIILEENGIAKGIRRIIAVTGEDAHEVQRVAKEFEKRLDRLDAMALGPQ 835

Query: 817 ---DASKIEGSL-------LEKNQVR--------------KAQKKVAEENLQKAVKVATE 852
              +A +I+  L       ++K++ R              KAQ+K+     +KA++    
Sbjct: 836 KEQEAKQIQVELNQLSISAVQKSRFRERFASINKQVIDGQKAQQKL---ETKKALEAIIS 892

Query: 853 TAEAAASNGKPFCISRVEVGLDAAAVREAV 882
             E+  + GK   ++R+ +  +  AV E++
Sbjct: 893 YFESPTNEGKTCLVTRLPISANPKAVSESL 922


>gi|396471207|ref|XP_003838816.1| similar to alanyl-tRNA synthetase [Leptosphaeria maculans JN3]
 gi|312215385|emb|CBX95337.1| similar to alanyl-tRNA synthetase [Leptosphaeria maculans JN3]
          Length = 968

 Score =  813 bits (2099), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 422/796 (53%), Positives = 541/796 (67%), Gaps = 25/796 (3%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           EW A +VR TF  +F+++ H    SS VVP++DPTLLF NAGMNQYK IF GT DP++  
Sbjct: 9   EWGAVRVRQTFLDYFKERGHSFVPSSSVVPLSDPTLLFTNAGMNQYKAIFQGTIDPSSDF 68

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
           ++L RA N+QKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK EAI + WELLT
Sbjct: 69  AQLKRATNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIGFTWELLT 128

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
           KVY +   RLY TYF G+E   L PD +A+++W    +P   +LP   KDNFWEMGD GP
Sbjct: 129 KVYGIDTKRLYVTYFEGNED--LEPDLKAKELWKSVGVPEDHILPGDMKDNFWEMGDQGP 186

Query: 236 CGPCSEIHYD----RTGN-RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHV 290
           CGPCSE+HYD      GN R+AASLVN DDP  IEIWN VF+Q+NRE D SL+PLP KH+
Sbjct: 187 CGPCSEVHYDLREPEGGNYRNAASLVNMDDPEVIEIWNNVFMQYNREPDRSLRPLPNKHI 246

Query: 291 DTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVV 350
           DTGLG+ERL S+LQ+  SNYDTDVF P+F  IQ+ TGAR Y G  GADD D +D AYRVV
Sbjct: 247 DTGLGYERLVSVLQHTKSNYDTDVFTPLFKRIQEVTGAREYRGGFGADDPDGIDTAYRVV 306

Query: 351 ADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVM 409
           ADH R +SFAIADG  P N GR YV+RR+LRR  RY  +  + + G FF+ ++  +V  M
Sbjct: 307 ADHTRMMSFAIADGGVPNNVGRGYVVRRVLRRGARYARKYFEVEIGDFFSKIIPTLVDQM 366

Query: 410 GDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK---VLSGQDAFILW 466
           GD+FPE+++++  I EI+  EE +F K+L +G   F+K AQ  + K    L G D + L+
Sbjct: 367 GDMFPEIRKKQQDIIEILDEEEKAFAKSLDRGEVIFEKYAQKAKAKGSNDLPGDDVWRLY 426

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIV-MDADATAAL 525
           DTYGFP+DLT+LMAEERGL ++ +    A ++ARE S+   +K+AG A+V  D     AL
Sbjct: 427 DTYGFPVDLTKLMAEERGLNINDKEVEKAQEKAREASKG--DKKAGAAVVKFDVHDLGAL 484

Query: 526 HKR-GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESV--VP-GNEVGIVLASSSFYAEQ 581
                V  TDDS K+   ++  + IKAIY   +F++S   VP G + G++L  ++FYAEQ
Sbjct: 485 DAMDDVPKTDDSPKY-GRENITATIKAIYHNKQFLKSTKEVPEGEQFGVLLDKTNFYAEQ 543

Query: 582 GGQIFDEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRK 639
           GGQ +D G   ++G      + NVQ+Y G+V+H G L    G   VG EVI + D  RR 
Sbjct: 544 GGQEYDTGRLLVDGE-AEISIENVQVYAGYVLHTGYLK--YGELKVGSEVIAEFDELRRH 600

Query: 640 LIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNE 699
            I  NHT TH+LN+ALREVLG+ VDQKGS+V PEKLRFDFSH   +    + ++ESI   
Sbjct: 601 PIRNNHTGTHVLNYALREVLGNEVDQKGSLVAPEKLRFDFSHKAGLSDAEIEKVESISTT 660

Query: 700 QIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSI 759
            IKA+  V++K+  L++AK I G+RAVFGE YPDPVRVV++G+ VEDLLADP+N  W  +
Sbjct: 661 YIKADAKVYAKDVPLSKAKEITGVRAVFGETYPDPVRVVSVGQPVEDLLADPKNPAWGKL 720

Query: 760 SAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDAS 819
           S E CGGTH+  T E +   +L E GIAKGIRRI AVT   AY     A      ++   
Sbjct: 721 SVEFCGGTHVLKTGEIKELVILEESGIAKGIRRIVAVTGQEAYNVQRLANDFATRLESFG 780

Query: 820 KIEGSLLEKNQVRKAQ 835
           K+     ++ + +K Q
Sbjct: 781 KMPFGPAKEAEAKKLQ 796


>gi|157869507|ref|XP_001683305.1| putative alanyl-tRNA synthetase [Leishmania major strain Friedlin]
 gi|68224189|emb|CAJ04856.1| putative alanyl-tRNA synthetase [Leishmania major strain Friedlin]
          Length = 962

 Score =  813 bits (2099), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 433/942 (45%), Positives = 585/942 (62%), Gaps = 58/942 (6%)

Query: 56  VEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQ 115
            EWP ++VR  F  +F+ + H    SSPV P +DPTLLF NAGMNQ+K +FLGTADPNT 
Sbjct: 4   TEWPVSRVRQEFVDYFKKQGHTFVPSSPVCPHDDPTLLFINAGMNQFKALFLGTADPNTD 63

Query: 116 LSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELL 175
             +L RA N+Q CIRAGGKHNDL+DVG+DTYHHTFFEMLG+WSFGDYFK EAI+WAWELL
Sbjct: 64  FGRLKRAANSQMCIRAGGKHNDLEDVGRDTYHHTFFEMLGSWSFGDYFKKEAIQWAWELL 123

Query: 176 TKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGP 235
           T+VY+LP D+LY TYF GDE  GL PD EA+++W + LP S+++P   KDNFWEMGDTGP
Sbjct: 124 TEVYKLPKDQLYVTYFEGDESNGLDPDLEAKELWGQLLPESQIVPGNAKDNFWEMGDTGP 183

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPCSE+H+DR G R+AASLVN DDP  +EIWN+VF+QF R + G L PLP KH+DTG+G
Sbjct: 184 CGPCSEVHFDRIGRRNAASLVNKDDPMVVEIWNLVFMQFERRAGGFLTPLPQKHIDTGMG 243

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
            ERLTSILQ   SNYDTD ++P+F+AIQ ATG      ++  D      +AYRVVADHIR
Sbjct: 244 LERLTSILQGVKSNYDTDAWIPLFEAIQTATGYPKSYAEIRNDPDSDALVAYRVVADHIR 303

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPE 415
            L+ A+ DG  P + GR +VLRRI+RRAVRYG + L A+ GFF  LV+ V   +G  FP 
Sbjct: 304 CLTSAVGDGVMPDSVGRGFVLRRIIRRAVRYGVQFLGAKPGFFTQLVDSVCTSLGPFFPH 363

Query: 416 LKQRE--AHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG---KVLSGQDAFILWDTYG 470
           LK+      I+ ++A EE SF KT   G++ F  A  + +    KV+SG +AF+L D YG
Sbjct: 364 LKEPRNIQRIKAVLADEEQSFAKTWEMGLKHFNHAVNECRANSSKVISGSEAFVLHDRYG 423

Query: 471 FPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGV 530
           FP+DLT L+AE+ G+ VD+EGFN  M E    S+ +  + A     +DA     L  RG+
Sbjct: 424 FPVDLTCLLAEKDGMTVDLEGFNTEMKE----SKVSAGRVAATKTFIDAYQLEELKTRGI 479

Query: 531 LATDDSFKFIWFQDHKSVIKAIY--TGSEFIESVVPGNE-----VGIVLASSSFYAEQGG 583
             T+D+ K++W +D+   + AI+    S+FI  + PGN+     VGI+L++++FYAE GG
Sbjct: 480 PQTNDAAKYVW-EDYTGDVLAIFDKKNSKFISLLEPGNDLGAEGVGIILSTTNFYAESGG 538

Query: 584 QIFDEGFIEGLFGS-FYVRNVQIYGGFVIHIGSLTE-GAGRFSVGEEVICKVDYDRRKLI 641
           Q++D G +     S F V+      G+V+H+G+L++  A        V  +VDY+RR  I
Sbjct: 539 QVYDTGRLVAASDSVFEVKKAYNVAGYVVHVGNLSKYSASPIPSSAVVQLQVDYERRLPI 598

Query: 642 APNHTCTHMLNFALREVLGD------HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIES 695
           A NHT TH LN+ LR VLG+       V QKGS+V  E LRFDFS+   +  E L R+E 
Sbjct: 599 AANHTTTHQLNWVLRRVLGEKPDNFTEVQQKGSLVTDEMLRFDFSYNTKLSNEDLVRVEQ 658

Query: 696 IVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKE 755
           ++NE+I+A L V+ +E  L  A  INGLR +FGE YPDPV V++IG  + ++LA+PE +E
Sbjct: 659 LLNEKIQAGLLVYREEVPLEAASKINGLRQMFGEKYPDPVSVISIGTPINEMLANPEKEE 718

Query: 756 WLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV 815
           W   + E CGGTHL N +EAE   ++SEE + KG+RR+   T   A K  +A   L+++ 
Sbjct: 719 WRDYAVEFCGGTHLKNLKEAEKAVIISEEALMKGVRRVVVATRLEADKVIKAGAELKRQY 778

Query: 816 DDASKIEG--------SLLEKNQ----VRKAQKKVAEENLQKAVK-----VATETAEA-- 856
           D+  K E         S+L KN     +    K    EN+  A+K     + ++ AEA  
Sbjct: 779 DELMKKEATATSVKALSVLNKNVGDSCIPLVLKNEMRENIDAAIKRMNATLKSQAAEARD 838

Query: 857 -AASNGK-----------PFCISRV-EVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTN 903
            AA  GK           PF + ++ E G +  A++            PV VF       
Sbjct: 839 KAAEAGKCLGASYDAAAAPFLVHQMTEFGAEREALQAFSDGFSSTVSGPVGVFLIGSDNE 898

Query: 904 KAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGL 945
           KA+    +P    + K   V+ W  +++    G+    + GL
Sbjct: 899 KALAIVSMPAAFVEKKMSAVA-WAKSSIGKGGGKPNAAQSGL 939


>gi|389601275|ref|XP_001565061.2| putative alanyl-tRNA synthetase [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|322504973|emb|CAM45216.2| putative alanyl-tRNA synthetase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 962

 Score =  812 bits (2098), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 410/815 (50%), Positives = 541/815 (66%), Gaps = 25/815 (3%)

Query: 56  VEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQ 115
           +EWP ++VR  F  +F+ + H     SPV P +DPTLLF NAGMNQ+K +FLGTADPNT 
Sbjct: 4   IEWPVSRVRQKFVDYFKKQGHTFVPGSPVCPHDDPTLLFINAGMNQFKTLFLGTADPNTD 63

Query: 116 LSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELL 175
             +L R  N+Q CIRAGGKHNDL+DVG+DTYHHTFFEMLG+WSFGDYFK EAI+WAWELL
Sbjct: 64  FGRLKRVANSQMCIRAGGKHNDLEDVGRDTYHHTFFEMLGSWSFGDYFKKEAIQWAWELL 123

Query: 176 TKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGP 235
           T+VY+LP D+LY TYF GD K GL PD EA+++W +FLP S+++P   KDNFWEMGDTGP
Sbjct: 124 TEVYKLPKDQLYVTYFEGDVKNGLDPDLEAKELWGQFLPESQIIPGNAKDNFWEMGDTGP 183

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPCSE+H+DR G R+AA LVN DDP  +EIWN+VF+QF R +DG L PLP KHVDTG+G
Sbjct: 184 CGPCSEVHFDRIGGRNAAGLVNKDDPMVVEIWNLVFMQFERRTDGLLTPLPQKHVDTGMG 243

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
            ERLTSILQ   SNYDTDV++PIF+AIQ ATG R    ++ ++      +AYRVVADHIR
Sbjct: 244 LERLTSILQGVKSNYDTDVWIPIFEAIQTATGYRKSYVEIRSEPDSDALVAYRVVADHIR 303

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPE 415
            L+ A+ DG  P + GR +VLRRI+RRAVRYG + L A  GFF  LV+ V   +G  FP 
Sbjct: 304 CLTSAVGDGVMPDSVGRGFVLRRIIRRAVRYGVQFLGADPGFFTQLVDSVCASLGPFFPH 363

Query: 416 LK--QREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG---KVLSGQDAFILWDTYG 470
           LK  +    I+ ++A EE SF KT   G++ F  AA + +    +V+SG +AF+L D YG
Sbjct: 364 LKDPRNIQRIKAVLADEEQSFAKTWEMGLKHFNHAAGECRANNSRVISGSEAFVLHDRYG 423

Query: 471 FPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGV 530
           FP+DLT L+AE+ G+ VD+EGFN  M    + ++ +  + A     +DA     L KR +
Sbjct: 424 FPVDLTCLLAEKDGMTVDLEGFNAEM----KANQVSAGRVAAAKTFIDAYQLEDLKKRAI 479

Query: 531 LATDDSFKFIWFQDHKSVIKAIY--TGSEFIESVVPGN-----EVGIVLASSSFYAEQGG 583
             TDD  K+ W +D    + AI+    S FI  + PGN     EVGI+L +++FYAE GG
Sbjct: 480 PQTDDGAKYAW-EDSTGEVLAIFDKKNSRFISLLEPGNDLGAEEVGIILNATNFYAESGG 538

Query: 584 QIFDEG-FIEGLFGSFYVRNVQIYGGFVIHIGSLT-EGAGRFSVGEEVICKVDYDRRKLI 641
           Q++D G  +      F V+ V   GG+V+H+G L+ + A    +   V  +VDY+RR  I
Sbjct: 539 QVYDTGRLVAARDCVFEVKKVYNVGGYVVHVGKLSKDSASPIPLSALVQMQVDYERRLPI 598

Query: 642 APNHTCTHMLNFALREVLGDH------VDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIES 695
           A NHT TH LN+ LR VL ++      V QKGS+V  E LRFDFSH   +  E L R+E 
Sbjct: 599 AANHTTTHQLNWTLRRVLEENPANFTEVQQKGSLVTDEMLRFDFSHHTKLSNEDLVRVEK 658

Query: 696 IVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKE 755
           ++NE+I+A L V+ +E  LA A  INGLR +FGE YPDPV V++IG  + ++LA+PE +E
Sbjct: 659 LLNEKIQAGLPVYREEVPLAAASKINGLRQMFGEKYPDPVSVISIGAPINEMLANPEKEE 718

Query: 756 WLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV 815
           W   + E CGGTHLSN +EAE   ++SEE + KG+RR+   T   A KA +A   L+ + 
Sbjct: 719 WRDYAVEFCGGTHLSNLKEAEKAVIISEEALMKGVRRVVVATKAEADKAIKAGAELKGQY 778

Query: 816 DDASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVA 850
           D+  K E ++     +    KKV +  +   +K A
Sbjct: 779 DELVKREATVGNIKALSVLNKKVGDSCVPLVLKNA 813


>gi|6176442|gb|AAF05593.1|AF188718_1 alanyl-tRNA synthetase [Drosophila melanogaster]
          Length = 966

 Score =  812 bits (2097), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 436/970 (44%), Positives = 586/970 (60%), Gaps = 68/970 (7%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A +VR+ +  FF+++ H+   SS  +P++DPTLLFANAGMNQ+KPIFLGTADPN+++SK 
Sbjct: 6   AKEVRNAYLDFFKEQKHIYVHSSSTIPLDDPTLLFANAGMNQFKPIFLGTADPNSEMSKW 65

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFGDYFK E   WAWE LT+  
Sbjct: 66  VRVANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKEICSWAWEFLTQRL 125

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            LP DRLY TYFGGD  +GL PD E + +WL   L    +LP   KDNFWEMG+TGPCGP
Sbjct: 126 ALPKDRLYVTYFGGDAASGLEPDLECKQMWLDLGLKPEHILPGSMKDNFWEMGETGPCGP 185

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSE+H+DR G R    LVN DDP  +EIWN+VFIQ+NRESDGSLK LP KH+D G+GFER
Sbjct: 186 CSELHFDRIGGRSVPELVNMDDPDVLEIWNLVFIQYNRESDGSLKQLPKKHIDCGMGFER 245

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S++QNK SNYDTD+F+P+    ++A   +PY G+VGADD D +DMAYRV+ADH RT++
Sbjct: 246 LVSVIQNKRSNYDTDLFVPLSMPSKRALVPQPYQGRVGADDVDGIDMAYRVLADHARTIT 305

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY +E L A+ GFF  LVN VV ++GD FPE+K+
Sbjct: 306 IALADGGTPDNTGRGYVLRRILRRAVRYATEKLNAKPGFFATLVNTVVDLLGDAFPEVKK 365

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK-VLSGQDAFILWDTYGFPLDLTQ 477
              HI +II  EE  F KTL +G     +  + +  +  + G  A+ L+DTYGFP+DLTQ
Sbjct: 366 DPQHIIDIINEEELQFLKTLTRGRNLLNRTIEKLGNQTTIPGDVAWRLYDTYGFPVDLTQ 425

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA-----IVMDADATAALHKRGVLA 532
           LMAEE+ L +D++G+  A      +  S    Q  GA     I +D  A + L ++GV  
Sbjct: 426 LMAEEKSLKIDMDGYEAA------KHNSYVLSQGKGASKIEEINLDVHAISQLQEQGVPP 479

Query: 533 TDDSFKFIW--FQDHK----------SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAE 580
           T+D+FK+ +    D +          S I A+   ++F+  +  G + GIVL  ++FYAE
Sbjct: 480 TNDTFKYKYEAVSDERDSAYNYGVCNSKIVALRFENQFVNEITSGQKAGIVLDKTNFYAE 539

Query: 581 QGGQIFDEGFIEGL---FGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDR 637
            GGQI+D+G +  +      F V  V   GG+++HIG +    G   VG+E+   +D +R
Sbjct: 540 SGGQIYDQGALVKVNDEANEFLVDRVYNRGGYILHIGVV---EGTLKVGDELELHIDVER 596

Query: 638 RKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIV 697
           R L   NH+ TH LN  L +VLG   +QKGS+V+PEKLRFDF+    +      R  S+ 
Sbjct: 597 RWLTMKNHSATHALNHCLLQVLGKDTEQKGSLVVPEKLRFDFNSKAAMPSSRCPRRSSLT 656

Query: 698 NEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWL 757
            E +   + +++KE+ LA AK I GLR+VF EVYPDPVRV++ G  V++L  +P+++   
Sbjct: 657 KEMVYKNVPIYAKESKLALAKKIRGLRSVFDEVYPDPVRVISFGVPVDELEQNPDSEAGE 716

Query: 758 SISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV-- 815
             S E CGGTHL  +     F + SEE IAKGIRRI A+T   A KA + + + E+E+  
Sbjct: 717 QTSVEFCGGTHLRRSGHIMDFVISSEEAIAKGIRRIVALTGPEALKALKKSEAFEQEIVR 776

Query: 816 ------------DDASKIEGSLLEKNQVRKAQ----KKVAEENLQKAVKVATETAEAA-- 857
                       D  S ++  +    Q+  A     KK    NL K +K   +  E A  
Sbjct: 777 LKATIDNDKSGKDSKSHVKEIVELTEQISHATIPYVKKDEMRNLLKGLKKTLDDKERALR 836

Query: 858 -------ASNGKPFC---------ISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDET 901
                      K  C         + ++E   +  A+  A+ +V  Q      +F + + 
Sbjct: 837 AAVSVTVVERAKTLCEANPNATVLVEQLEAFNNTKALDAALKQVRSQLPDAAAMFLSVDA 896

Query: 902 TNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMD 961
            +K + C     KS   K L+ +EW+      L G+ G GK   A   GT+  +V   + 
Sbjct: 897 DSKKIFCLSSVPKSAVEKGLKANEWVQHVSATLGGKGG-GKPESAQASGTNYEKVDEIVQ 955

Query: 962 LAAEFAAMKL 971
           LA++FA  KL
Sbjct: 956 LASKFAQSKL 965


>gi|358059531|dbj|GAA94688.1| hypothetical protein E5Q_01341 [Mixia osmundae IAM 14324]
          Length = 1005

 Score =  810 bits (2091), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 429/822 (52%), Positives = 538/822 (65%), Gaps = 20/822 (2%)

Query: 16  TARVLLNPSLTLAVTNHHHSLISRFSASAVAAMPGADPQVVEWPATKVRDTFFKFFE--- 72
           T R+L       A+T       +  S +++A M     Q  +WPA+KVR TF  +FE   
Sbjct: 15  TQRLLRQICRRSAITTVGSLKWTHSSLASLARMASTSSQFGDWPASKVRATFIDYFEHHK 74

Query: 73  DKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAG 132
           D  H    SS  +P NDPTL+FANAGMNQYK  FLGTA+    L  L RA N+QKCIRAG
Sbjct: 75  DLPHTFVPSSSTIPYNDPTLMFANAGMNQYKACFLGTAE--GPLGALKRAANSQKCIRAG 132

Query: 133 GKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLPADRLYATYFG 192
           GKHND+DDVGKDTYHHT+FEMLGNWSFGDYFK +A+   W LLTKVY LPADRLY TYF 
Sbjct: 133 GKHNDIDDVGKDTYHHTYFEMLGNWSFGDYFKQDALSLGWTLLTKVYGLPADRLYVTYFE 192

Query: 193 GDEKAGLAPDNEARDIWLKFLPASRVLPFG-CKDNFWEMGDTGPCGPCSEIHYDRTGNRD 251
           GD+  GL PD E R +WL    A   L  G  KDNFWEMG TGPCGPC+EIHYDR G R+
Sbjct: 193 GDQSQGLVPDEETRQLWLDLGVAEDHLIKGNAKDNFWEMGATGPCGPCTEIHYDRVGGRN 252

Query: 252 AASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYD 311
           AA LVN DDP  +E+WN+VFIQ+NRE D SL+ LPAKHVDTG+GFERL S+LQ+K SNYD
Sbjct: 253 AAHLVNMDDPLVLEVWNLVFIQYNREEDNSLRNLPAKHVDTGMGFERLVSVLQDKPSNYD 312

Query: 312 TDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEG 371
           TDVF P+F  IQ+ TGARPY GK+G +D  ++D AYRVVADH+RTL+FA+ADG  P N G
Sbjct: 313 TDVFAPLFAKIQEMTGARPYGGKLGKEDQGEIDTAYRVVADHVRTLTFALADGGVPSNVG 372

Query: 372 REYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFPELKQREAHIREIIAAE 430
           R YVLRRILRR  RY  +      G FF+ L+  VV  MG  FPE+ +    I+EI+  E
Sbjct: 373 RGYVLRRILRRGCRYIRKKFDVPIGSFFSTLMPTVVDQMGGFFPEITKSATDIKEILDEE 432

Query: 431 EASFGKTLLKGIEKFKKAAQDVQGK---VLSGQDAFILWDTYGFPLDLTQLMAEERGLLV 487
           E +F +TL +G + F+  A   + K    LSG+D + L++TYGFP+DLT LMAEE+GL  
Sbjct: 433 EVAFARTLDRGEKMFELYADQTRAKGKTELSGKDVWRLYETYGFPVDLTLLMAEEQGLSY 492

Query: 488 DIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR-GVLATDDSFKFIWFQDHK 546
           + + F+ A   + E S++   K+   AI +D      L     V  TDD  K+   Q   
Sbjct: 493 NQKEFDAAQAHSIEVSKAGIKKEGANAIKLDVHDLGKLDSTDSVKKTDDDAKYSETQ-LD 551

Query: 547 SVIKAIYTGSEFIE---SVVPGNEVGIVLASSSFYAEQGGQIFDEG--FIEGLFGSFYVR 601
           + IKAIY    F++   S+  G   GI+L  +  YAE GGQ  D G   I G    F V+
Sbjct: 552 ATIKAIYHDRSFVDNTSSIEQGKPFGILLDRTCLYAESGGQENDTGTIVIAGK-AEFLVQ 610

Query: 602 NVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGD 661
           +VQ Y G+V+H+G+LTEG+   SVG+ V+  +D  RR  I  NHT TH+LNFALREVLGD
Sbjct: 611 DVQAYKGYVLHVGTLTEGS--LSVGDAVVISLDELRRWPIKNNHTGTHILNFALREVLGD 668

Query: 662 HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCIN 721
           HV+QKGS+V P KLRFDFS+   +  + L++IE I N  IK  + V+SKE  L +AK I 
Sbjct: 669 HVEQKGSLVAPAKLRFDFSNKGGIPLQELQKIEEICNAWIKKNVPVYSKEVKLDDAKAIP 728

Query: 722 GLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALL 781
           GLRAVFGE YPDPVRVVA+   VE++  D +N +W S S E CGGTH++ T + ++  ++
Sbjct: 729 GLRAVFGEAYPDPVRVVALEFSVEEMAKDLKNPKWRSTSVEFCGGTHVNRTGDIQSLVIV 788

Query: 782 SEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEG 823
            E G AKGIRRITAVT   A +    A S   ++D   K+ G
Sbjct: 789 EEFGTAKGIRRITAVTGDEASECHRQANSYSMQLDSLEKLTG 830


>gi|407425709|gb|EKF39507.1| alanyl-tRNA synthetase, putative, partial [Trypanosoma cruzi
            marinkellei]
          Length = 1007

 Score =  809 bits (2089), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 448/975 (45%), Positives = 594/975 (60%), Gaps = 78/975 (8%)

Query: 55   VVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNT 114
            + EWP  +VR  F KFFE + H    SSPVVP NDPTLLF NAGMNQ+K IFLGTADPNT
Sbjct: 49   MTEWPVNRVRQEFLKFFEQRGHKFVPSSPVVPNNDPTLLFINAGMNQFKNIFLGTADPNT 108

Query: 115  QLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWEL 174
            +  +LTRA N+Q CIRAGGKHNDLDDVG+DTYHHTFFEMLG+WSFGDYFK +AI WAWEL
Sbjct: 109  EFGRLTRAANSQLCIRAGGKHNDLDDVGRDTYHHTFFEMLGSWSFGDYFKRDAIRWAWEL 168

Query: 175  LTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTG 234
            LT+VY+LP DRLY TYF GD + G+A D EA+ +WL+ +    V+    KDNFWEMGD G
Sbjct: 169  LTEVYKLPKDRLYVTYFEGDPENGIAADEEAKQLWLELVNPEHVISGNAKDNFWEMGDIG 228

Query: 235  PCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
            PCGPCSE+H+DR G R+AA LVN +DP  IEIWN+VF+QF R   G L PLP  HVDTG+
Sbjct: 229  PCGPCSEVHFDRLGGRNAADLVNKEDPMVIEIWNLVFMQFERHEGGVLVPLPKMHVDTGM 288

Query: 295  GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
            G ERLTSI+Q   SNYDTD + P+F+AIQ  TG      ++   +     +AYRV+ADHI
Sbjct: 289  GLERLTSIMQGVHSNYDTDAWTPLFEAIQAVTGYEKSYAEIREQNDSDATVAYRVIADHI 348

Query: 355  RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
            R LS ++ADG+ P + GR +VLRRI+RRAVRYG + L A+ GFF  LV+ VV  +G  F 
Sbjct: 349  RCLSVSLADGAMPDSVGRGFVLRRIIRRAVRYGLQFLGAKVGFFGELVDAVVASLGPFFT 408

Query: 415  ELKQREA--HIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFP 472
             L+       I+ ++A EEASF KT   G++ F KA  D     +SG +AFIL D YGFP
Sbjct: 409  HLQDPRTVQRIKTVLAEEEASFAKTWDVGLKHFNKAVADAVDNTISGDNAFILHDRYGFP 468

Query: 473  LDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLA 532
            +DLT L+AE+ GL VD+ GF+ AM    + ++ +  + A     +DA     L + G+  
Sbjct: 469  VDLTCLLAEKAGLRVDMNGFHAAM----KANQLSAGRIAAAKTFLDAHQLEELKQMGIAP 524

Query: 533  TDDSFKFIWFQDHKSVIKAIY---TGSEFIESVVPGNE----VGIVLASSSFYAEQGGQI 585
            T+D+ K+IW ++  + +KAI+   TG+ F++ ++PG E    +G+++  ++FYAE GGQI
Sbjct: 525  TEDAAKYIW-KNRTAEVKAIFNKKTGT-FVDMLMPGEEGEEDIGLIMDVTNFYAESGGQI 582

Query: 586  FDEG-FIEGLFGSFYVRNVQIYGGFVIHIGSL---TEGAGRFSVGEEVICKVDYDRRKLI 641
            +D G  +      F V+ V   GG+V+H+G +      A    V   V  +VDY RR  +
Sbjct: 583  YDTGRIVAAADAVFEVKKVYNLGGYVVHLGRMMTTNSTAVPIPVTSSVDLQVDYKRRIAV 642

Query: 642  APNHTCTHMLNFALREVLGD-------HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIE 694
            A NH+ TH+LN+ LR VL +        V QKGS+V  E LRFDFS+   V  E L +IE
Sbjct: 643  AANHSTTHVLNWCLRRVLEEEAPENYMEVQQKGSLVTEEMLRFDFSYNSKVSQEDLVKIE 702

Query: 695  SIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENK 754
              +NE+I+ EL V+ KE  L +AK I GLR +FGE YPDPV V+++G  V+DLLA PEN 
Sbjct: 703  KALNEKIQQELVVYRKEVELEKAKHIVGLRQMFGEKYPDPVSVISVGIPVDDLLAKPENA 762

Query: 755  EWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKE 814
            EW + + E CGGTHLSN +EAE   +LSEE + KG+RRI   T   A KA      LEKE
Sbjct: 763  EWRAYAVEFCGGTHLSNIKEAEVAVILSEEALMKGVRRIVVATRDAARKACARGELLEKE 822

Query: 815  --------VDDASKIEGSLLEK----NQVRKAQKKVAEENLQKAVKVATETAEAAASNGK 862
                    + D++    S+L K    + +    K    E +  +++ A    +A A+  +
Sbjct: 823  YRDIVAGGMTDSTAKSLSILNKKVGDSLIPLTVKNSLREEIDGSIRTALANVKAMAAQLR 882

Query: 863  -------------------PFCISRVEVGLDAAAVREAVLKVIE------QKGMPVMVFS 897
                               PF + R+    D  A REA+    +      Q  + V +F 
Sbjct: 883  EKAAVAGRAAAEAYDAVENPFFVKRLN---DFGAEREALQAYADGFTGAVQGDVGVFLFG 939

Query: 898  TDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQ-GTDAAQV 956
             D   NKA+    +P K+  +K+L   +W  AA+       GKG G   + Q G  AA V
Sbjct: 940  AD--ANKALALVTLP-KAFTAKKLSAVDWAKAAI-------GKGGGKPHAAQSGLTAADV 989

Query: 957  TPAMDLA-AEFAAMK 970
              AM+ A AE A M+
Sbjct: 990  DMAMEKALAEAAKMR 1004


>gi|189203303|ref|XP_001937987.1| alanyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187985086|gb|EDU50574.1| alanyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 966

 Score =  806 bits (2082), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 424/782 (54%), Positives = 541/782 (69%), Gaps = 25/782 (3%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           EW A +VR TF  +F+++ H    SS VVP++DPTLLF NAGMNQYK IF GT DP++  
Sbjct: 9   EWSAARVRQTFLDYFKERGHTFVPSSSVVPLSDPTLLFTNAGMNQYKSIFQGTVDPSSDF 68

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
           ++L RA N+QKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK EAI + WELLT
Sbjct: 69  AQLKRAANSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIGFTWELLT 128

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
            VY +   RLY TYF G +  GL PD EA+++W    +P   +LP   KDNFWEMGD GP
Sbjct: 129 GVYGIDPQRLYVTYFEGAD--GLEPDLEAKELWKSVGVPEDHILPGDMKDNFWEMGDQGP 186

Query: 236 CGPCSEIHYDRT-----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHV 290
           CGPCSE+HYD         R+AASLVN DDP  IEIWN VF+Q+NRE D SL+PLP KH+
Sbjct: 187 CGPCSEVHYDLREPEGGKYRNAASLVNMDDPEVIEIWNNVFMQYNREPDRSLRPLPNKHI 246

Query: 291 DTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVV 350
           DTG+G+ERL S+LQ+K SNYDTDVF P+F  IQ+ TGAR Y GK GA+D D +D AYRVV
Sbjct: 247 DTGMGYERLVSVLQHKKSNYDTDVFTPLFKKIQEITGAREYRGKFGAEDPDGIDTAYRVV 306

Query: 351 ADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVM 409
           ADH+R +SFAIADG  P N GR YV+RR+LRR  RY  +  +   G FF+ +V  +V+ M
Sbjct: 307 ADHVRMMSFAIADGGVPNNVGRGYVVRRVLRRGARYARKYFETDIGDFFSKIVPTLVEQM 366

Query: 410 GDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK---VLSGQDAFILW 466
           GD+FPE+K+++  I EI+  EE +F K+L +G   F+K AQ  + K    L G D + L+
Sbjct: 367 GDMFPEIKKKQQDIVEILDEEEKAFAKSLDRGEVIFEKYAQKAKVKGSDALPGDDVWRLY 426

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIV-MDADATAAL 525
           DTYGFP+DLT+LMAEERGL +D +    A ++ARE S+   +K+A GA+V  D     AL
Sbjct: 427 DTYGFPVDLTKLMAEERGLKIDDKEVEEAQEKAREASKG--DKKAAGALVKFDVHDLGAL 484

Query: 526 HKR-GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESV--VP-GNEVGIVLASSSFYAEQ 581
                V  TDDS K+   ++  SVIKAIY   +F++S   VP G + G++L  ++FYAEQ
Sbjct: 485 ENMPDVPKTDDSAKY-GRENITSVIKAIYHNKKFLKSTKEVPEGEQFGVLLDRTNFYAEQ 543

Query: 582 GGQIFDEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRK 639
           GGQ +D G   ++G      + NVQ+Y G+V+H G L +G    SVG EVI + D  RR 
Sbjct: 544 GGQEYDMGKLVVDGE-ACIDITNVQVYAGYVLHTGYLQDG--ELSVGSEVIAEFDESRRH 600

Query: 640 LIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNE 699
            I  NHT TH+LN+ALREVLG+ VDQKGS+V PEKLRFDFSH   +    L ++ESI ++
Sbjct: 601 PIRNNHTGTHVLNYALREVLGNEVDQKGSLVAPEKLRFDFSHKAGLSEAELDKVESISSK 660

Query: 700 QIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSI 759
            IK +  V++K+  LA AK I G+RAVFGE YPDPVRVV++G  VE+LLAD +N++W  +
Sbjct: 661 YIKEDAKVYAKDVPLASAKEIRGVRAVFGETYPDPVRVVSVGVPVEELLADVKNEKWEKL 720

Query: 760 SAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDAS 819
           S E CGGTH+  T E +   +L E GIAKGIRRI AVT   AY+    A   ++ V+   
Sbjct: 721 SIEFCGGTHVLKTGEIKELVILEESGIAKGIRRIVAVTGQEAYRVQRLATQFQERVEAMG 780

Query: 820 KI 821
           K+
Sbjct: 781 KM 782


>gi|71655886|ref|XP_816499.1| alanyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70881631|gb|EAN94648.1| alanyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 959

 Score =  806 bits (2081), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 449/975 (46%), Positives = 596/975 (61%), Gaps = 78/975 (8%)

Query: 55  VVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNT 114
           + EWP  +VR  F KFFE + H    SSPVVP NDPTLLF NAGMNQ+K +FLGTADPNT
Sbjct: 1   MTEWPVNRVRQEFLKFFEQRGHKFVPSSPVVPNNDPTLLFINAGMNQFKNLFLGTADPNT 60

Query: 115 QLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWEL 174
           +  +LTRA N+Q CIRAGGKHNDLDDVG+DTYHHTFFEMLG+WSFGDYFK +AI WAWEL
Sbjct: 61  EFGRLTRAANSQLCIRAGGKHNDLDDVGRDTYHHTFFEMLGSWSFGDYFKRDAIRWAWEL 120

Query: 175 LTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTG 234
           LT+VY+LP DRLY TYF GD + G+A D EA+ +WL+ +    V+    KDNFWEMGD G
Sbjct: 121 LTEVYKLPKDRLYVTYFEGDPENGIAADEEAKQLWLELVKPEHVISGNAKDNFWEMGDIG 180

Query: 235 PCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           PCGPCSE+H+DR G R+AA LVN +DP  IEIWN+VF+QF R  DG L PLP  HVDTG+
Sbjct: 181 PCGPCSEVHFDRLGGRNAAELVNKEDPMVIEIWNLVFMQFERHEDGVLVPLPKMHVDTGM 240

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           G ERLTSI+Q+  SNYDTD + P+F+AIQ  TG      ++   +     +AYRV+ADHI
Sbjct: 241 GLERLTSIMQDVHSNYDTDAWTPLFEAIQAVTGYEKSYAEIRDQNDSDATVAYRVIADHI 300

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R LS ++ADG+ P + GR +VLRRI+RRAVRYG + L A+ GFF+ LV+ VV  +G  F 
Sbjct: 301 RCLSVSLADGAMPDSVGRGFVLRRIIRRAVRYGLQFLGAKVGFFSELVDAVVASLGPFFT 360

Query: 415 ELKQREA--HIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFP 472
            ++       I+ ++A EEASF KT   G++   KA  D     +SG +AFIL D YGFP
Sbjct: 361 HMQDPRTVQRIKTVLADEEASFAKTWDVGLKHLNKAVADAVDNTISGDNAFILHDRYGFP 420

Query: 473 LDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLA 532
           +DLT L+AE+ GL VD+ GF+ AM    + ++ +  + A     +D      L + G+  
Sbjct: 421 VDLTCLLAEKAGLRVDMNGFHAAM----KANQLSAGRVAAAKTFLDVHQLEELKQMGIAP 476

Query: 533 TDDSFKFIWFQDHKSVIKAIY---TGSEFIESVVPGNE----VGIVLASSSFYAEQGGQI 585
           T+D+ K+IW ++  + +KAI+   TG+ F++ ++PG E    +G+++  ++FYAE GGQI
Sbjct: 477 TEDAAKYIW-KNRTAEVKAIFNKKTGT-FVDMLMPGEEGEEDIGLIMDVTNFYAESGGQI 534

Query: 586 FDEG-FIEGLFGSFYVRNVQIYGGFVIHIGSL---TEGAGRFSVGEEVICKVDYDRRKLI 641
           +D G  +      F V+ V   GG+V+H+G +      A    V   V  +VDY RR  I
Sbjct: 535 YDTGRIVAAADAVFEVKKVYNLGGYVVHLGRMMTTNSTAVPIPVTSSVDLQVDYKRRIAI 594

Query: 642 APNHTCTHMLNFALREVLGD-------HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIE 694
           A NH+ TH+LN+ LR VL D        V QKGS+V  E LRFDFS+   V  E L +IE
Sbjct: 595 AANHSMTHVLNWCLRRVLEDEAPENYMEVQQKGSLVTEEMLRFDFSYNSKVSQEDLVKIE 654

Query: 695 SIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENK 754
             +NE+I+  L V+ KE  L +AK I GLR +FGE YPDPV V+++G  V+DLLA PE+ 
Sbjct: 655 KALNEKIQQGLVVYRKEVELEKAKHIVGLRQMFGEKYPDPVSVISVGVPVDDLLAKPESA 714

Query: 755 EWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITA------------------- 795
           EW + + E CGGTHLSN +EAE   +LSEE + KG+RRI                     
Sbjct: 715 EWRAYAVEFCGGTHLSNIKEAEVAVILSEEALMKGVRRIVVATRDAAREARARGELLEKE 774

Query: 796 ----VTTGLAYKAFEAACSLEKEVDDA---SKIEGSLLEK--NQVRKA---QKKVAEENL 843
               V  G+     ++   L K+V D+     ++ SL E+    VR A    K +A +  
Sbjct: 775 YRDIVAGGMTDSTAKSLSVLNKKVGDSLIPLTVKNSLREEIDGSVRAAIANVKAMAAQLR 834

Query: 844 QKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIE------QKGMPVMVFS 897
           +KA       AEA  +   PF + R+    D  A REA+    +      Q  + V +F 
Sbjct: 835 EKATVAGRAEAEAYDAVENPFFVKRLS---DFGAEREALQAYADGFTNAVQGDVGVFLFG 891

Query: 898 TDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQ-GTDAAQV 956
           TD   NKA+    +P K+  +K+L   +W  AA+       GKG G   + Q G  AA V
Sbjct: 892 TD--ANKALALVTLP-KAFTAKKLSAVDWAKAAI-------GKGGGKPHAAQSGLTAADV 941

Query: 957 TPAMDLA-AEFAAMK 970
             AM+ A AE A MK
Sbjct: 942 DVAMEKALAEAAKMK 956


>gi|355764107|gb|EHH62253.1| hypothetical protein EGM_20519 [Macaca fascicularis]
          Length = 927

 Score =  806 bits (2081), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 447/973 (45%), Positives = 586/973 (60%), Gaps = 118/973 (12%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A+++R  F  FF+   H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  ++KL
Sbjct: 7   ASEIRQRFIDFFKRNEHTYIHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A + A ELLT+ +
Sbjct: 67  SRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF--------LPASRVLPFGCKDNFWEMG 231
            +P  RLY TYFGGDE AGL PD E + IW           L  +++LP   KDNFWEMG
Sbjct: 127 GIPIGRLYVTYFGGDEAAGLEPDLECKQIWQNLGYLYSFVRLDDTKILPGNMKDNFWEMG 186

Query: 232 DTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVD 291
           DTGPCGPCSEIHYDR G RDAA LVN DDP  +EIWN+VFIQ+NRE+DG LKPLP K +D
Sbjct: 187 DTGPCGPCSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNREADGILKPLPKKSID 246

Query: 292 TGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVA 351
           TG+G ERL S+LQNKMSNYDTD+F+P F+AIQ+ TGARPY+GKVGA+DAD +DMAYRV+A
Sbjct: 247 TGMGLERLVSVLQNKMSNYDTDLFIPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLA 306

Query: 352 DHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGD 411
           DH RT++ A+ADG  P N G  YVLRRILRRAVRY  E L A  GFF  LV++VV+ +GD
Sbjct: 307 DHARTITVALADGGRPDNTG--YVLRRILRRAVRYAHEKLNASRGFFATLVDVVVQSLGD 364

Query: 412 VFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYG 470
            FPELK+    +++II  EE  F KTL +G     +  Q +   K + G  A++L+DTYG
Sbjct: 365 AFPELKKDPDMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDSKTIPGDTAWLLYDTYG 424

Query: 471 FPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKR 528
           FP+DLT L+AEE+GL+VD++GF      A+ +S   Q K AGG   I++D  A   L  R
Sbjct: 425 FPVDLTGLIAEEKGLVVDMDGFEEERKLAQLKS---QGKGAGGEDLIMLDIYAIEELRAR 481

Query: 529 GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDE 588
           G+  TDDS K+ +  D        ++GS+                               
Sbjct: 482 GLEVTDDSPKYNYHLD--------FSGSK------------------------------- 502

Query: 589 GFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
                    F V+N Q+ GG+V+HIG++    G   VG++V   +D  RR+ I  NHT T
Sbjct: 503 -------TEFTVKNAQVRGGYVLHIGTIY---GDLKVGDQVRLFIDEPRRRPIMSNHTAT 552

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+LNFALR VLG+  DQKGS+V P++LRFDF+    +  + +++ E I NE I+A   V+
Sbjct: 553 HILNFALRSVLGE-ADQKGSLVAPDRLRFDFTAKGAMSTQQIKKAEEIANEMIEAAKAVY 611

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
           +++  LA AK I GLRAVF E YPDPVRVV+IG  V +LL DP        S E CGGTH
Sbjct: 612 TQDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTSVEFCGGTH 671

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEK--------------- 813
           L N+  A AF +++EE IAKGIRRI AVT   A KA   A SL+K               
Sbjct: 672 LRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKAESLKKSLSVMEAKVKAQTAP 731

Query: 814 ------EVDDASKIEGSLL----EKNQVRKAQKKVAE--ENLQKAVK------VATETAE 855
                 E+ D  +   + +    +K+++R+  K + +  ++L +A K      V  +T +
Sbjct: 732 NKDVQREIADLGEALATAVIPQWQKDELRETLKSLKKVMDDLDRASKADVQKRVLEKTKQ 791

Query: 856 AAASN-GKPFCISRVEVGLDAAAVR--------------EAVLKVIEQKG--MPVMVFST 898
              SN  +P  I  +E G  A A +                 LK+ +        M+F+ 
Sbjct: 792 LIDSNPNQPLVILEMESGASAKATQGPGPPPLGHISPALNEALKLFKTHSPQTSAMLFTV 851

Query: 899 DETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTP 958
           D    K      VP+ +  ++ L+ SEW+      + G+ G GK   A   G +   +  
Sbjct: 852 DNEAGKITCLCQVPQNA-ANRGLKASEWVQQVSGLMDGKGG-GKDVSAQATGKNIGCLQE 909

Query: 959 AMDLAAEFAAMKL 971
           A+ LA  FA ++L
Sbjct: 910 ALQLATSFAQLRL 922


>gi|71416315|ref|XP_810193.1| alanyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70874690|gb|EAN88342.1| alanyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 959

 Score =  805 bits (2080), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 452/975 (46%), Positives = 593/975 (60%), Gaps = 78/975 (8%)

Query: 55  VVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNT 114
           + EWP  +VR  F KFFE + H    SSPVVP NDPTLLF NAGMNQ+K +FLGTADPNT
Sbjct: 1   MTEWPVNRVRQEFLKFFEQRGHKFVPSSPVVPNNDPTLLFINAGMNQFKNLFLGTADPNT 60

Query: 115 QLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWEL 174
           +  +LTRA N+Q CIRAGGKHNDLDDVG+DTYHHTFFEMLG+WSFGDYFK +AI WAWEL
Sbjct: 61  EFGRLTRAANSQLCIRAGGKHNDLDDVGRDTYHHTFFEMLGSWSFGDYFKRDAIRWAWEL 120

Query: 175 LTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTG 234
           LT+VY+LP DRLY TYF GD + G+A D EA+ +WL+ +    V+    KDNFWEMGD G
Sbjct: 121 LTEVYKLPKDRLYVTYFEGDPENGIAADEEAKQLWLELVKPEHVISGNAKDNFWEMGDIG 180

Query: 235 PCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           PCGPCSE+H+DR G R+AA LVN +DP  IEIWN+VF+QF R   G L PLP  HVDTG+
Sbjct: 181 PCGPCSEVHFDRLGGRNAAELVNKEDPMVIEIWNLVFMQFERHEGGVLVPLPKMHVDTGM 240

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           G ERLTSI+Q   SNYDTD + P+F+AIQ  TG      ++   +     +AYRV+ADHI
Sbjct: 241 GLERLTSIMQGVHSNYDTDAWTPLFEAIQAVTGYEKSYAEIRDQNDSDATVAYRVIADHI 300

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R LS ++ADG+ P + GR +VLRRI+RRAVRYG + L A+ GFF+ LV+ VV  +G  F 
Sbjct: 301 RCLSVSLADGAMPDSVGRGFVLRRIIRRAVRYGLQFLGAKVGFFSELVDAVVASLGPFFT 360

Query: 415 ELKQREA--HIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFP 472
            ++       I+ ++A EEASF KT   G++ F KA  D     +SG +AFIL D YGFP
Sbjct: 361 HMQDPRTVQRIKTVLADEEASFAKTWDVGLKHFNKAVADAVDNTISGDNAFILHDRYGFP 420

Query: 473 LDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLA 532
           +DLT L+AE  GL VD+ GF+ AM    + ++ +  + A     +D      L + G+  
Sbjct: 421 VDLTCLLAENAGLRVDMNGFHAAM----KANQLSAGRVAAAKTFLDVHQLEELKQMGIAP 476

Query: 533 TDDSFKFIWFQDHKSVIKAIY---TGSEFIESVVPGNE----VGIVLASSSFYAEQGGQI 585
           T+D+ K+IW ++  + +KAI+   TG+ F++ ++PG E    +G+++  ++FYAE GGQI
Sbjct: 477 TEDAAKYIW-KNRTAEVKAIFNKKTGT-FVDMLMPGEEGEEDIGLIMDVTNFYAESGGQI 534

Query: 586 FDEG-FIEGLFGSFYVRNVQIYGGFVIHIGSL---TEGAGRFSVGEEVICKVDYDRRKLI 641
           +D G  +      F VR V   GG+V+H+G +      A    V   V  +VDY RR  I
Sbjct: 535 YDTGRIVAAADAVFEVRKVYNLGGYVVHLGRMMTTNSTAVPIPVTSSVDLQVDYKRRIAI 594

Query: 642 APNHTCTHMLNFALREVLGD-------HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIE 694
           A NH+ TH+LN+ LR VL D        V QKGS+V  E LRFDFS+   V  E L +IE
Sbjct: 595 AANHSMTHVLNWCLRRVLEDEAPENYMEVQQKGSLVTEEMLRFDFSYNSKVSQEDLVKIE 654

Query: 695 SIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENK 754
             +NE+I+  L V+ KE  L +AK I GLR +FGE YPDPV V+++G  V+DLLA PE+ 
Sbjct: 655 KALNEKIQQGLVVYRKEVELEKAKHIVGLRQMFGEKYPDPVSVISVGVPVDDLLAKPESA 714

Query: 755 EWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKE 814
           EW + + E CGGTHLSN +E+E   +LSEE + KG+RRI   T   A KA      LEKE
Sbjct: 715 EWRAYAVEFCGGTHLSNIKESEVAVILSEEALMKGVRRIVVATRDAARKARARGELLEKE 774

Query: 815 VDDA-----------------SKIEGSLLE---KNQVRKA-----------QKKVAEENL 843
             D                   K+  SL+    KN +R+             K +A +  
Sbjct: 775 YRDIVAGGMTDSTAKSLSVLNKKVGDSLIPLTVKNSLREEIDGSIRAALANVKAMAAQLR 834

Query: 844 QKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIE------QKGMPVMVFS 897
           +KA       AEA  +   PF + R+    D  A REA+    +      Q  + V +F 
Sbjct: 835 EKATVAGRAEAEAYDAVENPFFVKRLS---DFGAEREALQAYADGFTNAVQGDVGVFLFG 891

Query: 898 TDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQ-GTDAAQV 956
           TD   NKA+    +P K+  +K+L   +W  AA+       GKG G   + Q G  AA V
Sbjct: 892 TD--ANKALALVTLP-KAFTAKKLSAVDWAKAAI-------GKGGGKPHAAQSGLTAADV 941

Query: 957 TPAMDLA-AEFAAMK 970
             AM+ A AE A MK
Sbjct: 942 DVAMEKALAEAAKMK 956


>gi|358390987|gb|EHK40392.1| hypothetical protein TRIATDRAFT_153342 [Trichoderma atroviride IMI
           206040]
          Length = 954

 Score =  805 bits (2080), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 447/957 (46%), Positives = 604/957 (63%), Gaps = 50/957 (5%)

Query: 58  WPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLS 117
           WP  +VR TFF FFE + H    S  VVP NDPTLLF NAGMNQ+KPIFLGT + +  +S
Sbjct: 5   WPEAQVRKTFFDFFEQRGHTLVPSGSVVPHNDPTLLFTNAGMNQFKPIFLGTVNKSDPMS 64

Query: 118 KLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTK 177
            L RA +TQK IRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK +AIE AWELLTK
Sbjct: 65  SLKRAVDTQKVIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKDAIEMAWELLTK 124

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPC 236
           VY L   RLY TYF G+   GL PD EA+++W K  +P   ++P   KDNFWEMGD GPC
Sbjct: 125 VYGLDPSRLYVTYFEGNPALGLEPDLEAKELWQKTGVPEDHIIPGNMKDNFWEMGDQGPC 184

Query: 237 GPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGF 296
           GPCSE+HYD+ G R+AASLVN DDP  +EIWN+VF+QF+R+ DGSLKPLPAKH+DTG+GF
Sbjct: 185 GPCSEVHYDKIGGRNAASLVNMDDPMVVEIWNLVFMQFDRQKDGSLKPLPAKHIDTGMGF 244

Query: 297 ERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRT 356
           ERL S LQ+  SNY TDVF P+F  IQ+ TGAR Y+ K GA+D D +D AYRVVADHIRT
Sbjct: 245 ERLVSALQDTASNYATDVFTPLFKKIQEVTGARLYTDKYGAEDTDGIDTAYRVVADHIRT 304

Query: 357 LSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFPE 415
           +SFAI DG+ P N+GR YV+RRILRR VRY  + L A+ G FF+ ++  +V  MG+ FP+
Sbjct: 305 MSFAITDGAVPNNDGRGYVIRRILRRGVRYARKYLNAEIGSFFSKILPALVAQMGEQFPD 364

Query: 416 LKQREAHIREIIAAEEASFGKTLLKGIEKFK----KAAQDVQGKVLSGQDAFILWDTYGF 471
           L +++  I+EI+  EE +F +TL +G  +F+    KAA+D   K L G   + L+DT+GF
Sbjct: 365 LAKKQLDIQEILDEEEEAFSRTLDRGEAQFERYAAKAAKDGVKK-LDGDVVWRLYDTFGF 423

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR-GV 530
           P+DLT+LMAEERGL +D      A ++ARE S++ ++     A  +D    A L  +  V
Sbjct: 424 PVDLTKLMAEERGLDIDEAEVAVAREKAREASKAVKDSVQTFA-KLDVHQIAELDTQLKV 482

Query: 531 LATDDSFKFIWFQDHKSVIKAIYTGSEFIES---VVPGNEVGIVLASSSFYAEQGGQIFD 587
             T+D  K++   D KS ++ I+ G  F +S   + P   +G++L  ++FYAE GGQI D
Sbjct: 483 PRTNDDAKYLK-GDSKSKVQYIFDGKTFTKSTKDIPPNTAIGLLLDKTNFYAESGGQIAD 541

Query: 588 EG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            G   I+ +   F V +VQ +GG+V+H G +    G  +  +EVIC+ D  RR  I  NH
Sbjct: 542 TGRIVIDDVV-EFKVMDVQDFGGYVLHSGYIE--YGELNSDDEVICEYDELRRSPIRNNH 598

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+LN +LREVLG+ V+QKGS+V  +KLRFDFSH   V  + L++IE + N+ I+A  
Sbjct: 599 SGTHILNHSLREVLGEDVNQKGSLVDNDKLRFDFSHKTQVKLDELKKIEELSNKDIRANH 658

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            +++K+  L  A  I GLRAVFGE YP+PVRVV+IG  V+ +LADP+  +W   S ELCG
Sbjct: 659 KIYAKDVELDLALKIEGLRAVFGETYPNPVRVVSIGMDVDTMLADPKKADWRQYSVELCG 718

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------- 815
           GTH+  T   +   ++ E GIAKGIRRI A T   A+K    A   E+++          
Sbjct: 719 GTHVEQTGLLKDLIIVEESGIAKGIRRIIAYTGEAAHKVQREAKLFEQKLVDLDNLPFGP 778

Query: 816 ----------DDASKIEGSLLEKNQVRKAQKKVA------EENLQKA-VKVATETAEAAA 858
                      D S++  S L K++  +  +K+A      ++  QKA  K A +T     
Sbjct: 779 EKEAAVKTVSQDLSQLVISTLTKDEFNQRFQKIANAVVAEQKKKQKAESKTALDTVTKHF 838

Query: 859 SNGK--PFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSD 916
            + K   + + R+ +  +A AV E V+K  + K     V+    +  +  V  GV   + 
Sbjct: 839 ESNKESQWFVGRLPISANAKAVGE-VIKHYQSKYKEKSVYLFVGSQEEGAVAHGVYVGTH 897

Query: 917 QSKQ-LEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKLR 972
            + Q +   +W  +    + GR G GK     GQGT   ++  A++ A ++   KL+
Sbjct: 898 LASQGVTAEKWAASVSDVIGGRSG-GKEPSRQGQGTQPEKIEDAVETARKWLDEKLK 953


>gi|221502948|gb|EEE28658.1| alanyl-tRNA synthetase, putative [Toxoplasma gondii VEG]
          Length = 1037

 Score =  804 bits (2077), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 460/979 (46%), Positives = 581/979 (59%), Gaps = 113/979 (11%)

Query: 58  WPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLS 117
           W    VR  + +FFE + H+ + SSPV+P  D TLLF NAGMNQ+KPIFLG  D ++ LS
Sbjct: 24  WSGEAVRGAYLEFFEAQGHLIYPSSPVIPRGDNTLLFINAGMNQFKPIFLGQIDRSSPLS 83

Query: 118 KLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTK 177
           KL R  +TQKCIRAGGKHNDL+DVGKD YHHTFFEMLGNWSFGDYFK EAI WAW+LLT+
Sbjct: 84  KLRRVADTQKCIRAGGKHNDLEDVGKDVYHHTFFEMLGNWSFGDYFKREAIAWAWQLLTE 143

Query: 178 VYRLPADRLYATYFGGDEK-AGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPC 236
           VY++P DRLYA+YFGGD +     PD EARDIWL++LPA+RVLPFG K+NFWEM DTGPC
Sbjct: 144 VYKIPKDRLYASYFGGDPRLPSCPPDEEARDIWLQYLPANRVLPFGAKENFWEMADTGPC 203

Query: 237 GPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGF 296
           GPCSEIHYDR G RDA+SLVN DDP+ +EIWN+VF+Q+NRE DGSL PLPA  VDTG+G 
Sbjct: 204 GPCSEIHYDRIGGRDASSLVNADDPSVLEIWNLVFMQYNREKDGSLTPLPAPCVDTGMGL 263

Query: 297 ERLTSILQNKMSNYDTDVFMPIFDAI-QQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
           ER+ S+LQ+K SNYDTD+F  +FD I + + G RPY GKVG +D D VDMAYRV+ADH R
Sbjct: 264 ERVASVLQDKQSNYDTDLFTALFDKILELSPGLRPYGGKVGEEDKDMVDMAYRVLADHAR 323

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPE 415
            L+ AIADG+ P NEGR YVLRRILRRAVRY  + L   +G F  LV +VV ++G+ FPE
Sbjct: 324 CLTAAIADGAEPSNEGRGYVLRRILRRAVRYARQTLGMAEGNFPKLVPVVVSLLGETFPE 383

Query: 416 LKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG---KVLSGQDAFILWDTYGFP 472
           +K+ E  +  I+  EE  F +TL  G+E+FKK A  +Q    KV  G +AF L+ TYGFP
Sbjct: 384 MKKNEEKVVRILLKEEQQFSRTLDNGVERFKKVANSLQAKGQKVFPGGEAFTLYSTYGFP 443

Query: 473 LDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIV--MDADATAAL-HKRG 529
           LDLTQLMAEE GL VD E F    D  R  S +   KQ G   V  +  D    L   R 
Sbjct: 444 LDLTQLMAEEVGLQVDAEEFKRKFDAHRAASENTSFKQGGAGAVYALPPDQRHLLAQSRK 503

Query: 530 VLATDDSFKFIW---------FQDH------KSVIKAIYTGSEF------IESVVPGNEV 568
           V  TDDS K+ W          QD       K+ + AI+ G  F      + S    N V
Sbjct: 504 VPPTDDSAKYEWNVMNQAALMTQDAVEAAPIKAKVMAIWDGKRFAPEVTAVASPTGENLV 563

Query: 569 GIVLASSSFYAEQGGQIFDEGFIEGLF--GSFYVRNVQIYGGFVIHIGSLTEGAGRFSVG 626
            ++L  + FYAEQGGQI D G +  L     F V + Q  G F++HIGS+++G  R   G
Sbjct: 564 AVILDKTCFYAEQGGQIGDVGRLVDLSSQAEFEVVDSQKSGDFILHIGSMSKGTLR--EG 621

Query: 627 EEVICKVDYDRRKLIAPNHTCTHMLNFALREVL--------------------------- 659
            E++  VDY RR  +A +HT TH+LNFALREVL                           
Sbjct: 622 TELVPAVDYVRRFRLAQHHTGTHLLNFALREVLIRKLRSGGKASANGDKREDTNGIRICE 681

Query: 660 ----------GDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
                     G+ + QKGS+V  ++LRFD++  KP++ E +  +E++V + I     V  
Sbjct: 682 SCLNEKELEDGEDIQQKGSLVEVKRLRFDYAGEKPLENEDIIAVENVVKDCIAQARPVHY 741

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDL--LADPENKEWLSISAELCGGT 767
           KE  L +A  I GLRAVFGEVYPDPVRVV++G  +E L  LAD    E    S ELCGGT
Sbjct: 742 KEVPLEQAMKIPGLRAVFGEVYPDPVRVVSVGEDIESLVALADSSQPETPFASIELCGGT 801

Query: 768 HLSNTREAEAFALLSEEGIAKGIRRITAVTTGL-------------AYKAFEAA----CS 810
           HL N  +   F +LSEE +AKG+RR+ A                  A+++  +A     +
Sbjct: 802 HLHNASQLSDFCILSEESVAKGVRRVVAAAGDAAFEARKELEELEEAFRSLASAPRELAA 861

Query: 811 LEKEVDDAS---------KIEGSLLEKNQVRKAQKKVAEENLQKA-----VKVATETAEA 856
           LEKEV  A           + G      Q+ +AQK + E  LQKA     VK A +  E 
Sbjct: 862 LEKEVAKARGLLDGAGPLPLVGKRSLVKQLEQAQKALLE--LQKARSKELVKEAKKLGEE 919

Query: 857 AAS--NGKPFCISRVEVGLDAAAVREAVLKVIEQKG--MPVMVFSTDETTNKAVVCAGVP 912
             +    KPF +  +   L      +A  + + Q    +P ++  T          A VP
Sbjct: 920 LGTEHKTKPFLVLNLPQLLGDGKALDAASQTLHQAAPDLPFLLV-TASAAAGTAAIAFVP 978

Query: 913 EKSDQSKQLEVSEWLTAAL 931
                  QL  + WLTA +
Sbjct: 979 AACS---QLHAASWLTACV 994


>gi|407859304|gb|EKG06983.1| alanyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 959

 Score =  804 bits (2077), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 448/975 (45%), Positives = 594/975 (60%), Gaps = 78/975 (8%)

Query: 55  VVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNT 114
           + EWP  +VR  F KFFE + H    SSPVVP NDPTLLF NAGMNQ+K +FLGTADPNT
Sbjct: 1   MTEWPVNRVRQEFLKFFEQRGHKFVPSSPVVPNNDPTLLFINAGMNQFKNLFLGTADPNT 60

Query: 115 QLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWEL 174
           +  +LTRA N+Q CIRAGGKHNDLDDVG+DTYHHTFFEMLG+WSFGDYFK +AI WAWEL
Sbjct: 61  EFGRLTRAANSQLCIRAGGKHNDLDDVGRDTYHHTFFEMLGSWSFGDYFKRDAIRWAWEL 120

Query: 175 LTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTG 234
           LT+VY+LP DRLY TYF GD + G+A D EA+ +WL+ +    V+    KDNFWEMGD G
Sbjct: 121 LTEVYKLPKDRLYVTYFEGDPENGIAADEEAKQLWLELVKPEHVISGNAKDNFWEMGDIG 180

Query: 235 PCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           PCGPCSE+H+DR G R+AA LVN +DP  IEIWN+VF+QF R   G L PLP  HVDTG+
Sbjct: 181 PCGPCSEVHFDRLGGRNAAELVNKEDPMVIEIWNLVFMQFERHEGGVLVPLPKMHVDTGM 240

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           G ERLTSI+Q   SNYDTD + P+F+AIQ  TG      ++   +     +AYRV+ADHI
Sbjct: 241 GLERLTSIMQGVHSNYDTDAWTPLFEAIQAVTGYEKSYAEIRDQNDSDATVAYRVIADHI 300

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R LS ++ADG+ P + GR +VLRRI+RRAVRYG + L A+ GFF+ LV+ VV  +G  F 
Sbjct: 301 RCLSVSLADGAMPDSVGRGFVLRRIIRRAVRYGLQFLGAKVGFFSELVDAVVASLGPFFT 360

Query: 415 ELKQREA--HIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFP 472
            ++       I+ ++A EEASF KT   G++ F KA  D     +SG +AFIL D YGFP
Sbjct: 361 HMQDPRTVQRIKTVLADEEASFSKTWDVGLKHFNKAVADAVDNTISGDNAFILHDRYGFP 420

Query: 473 LDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLA 532
           +DLT L+AE+ GL VD+ GF+  M    + ++ +  + A     +D      L + G+  
Sbjct: 421 VDLTCLLAEKAGLRVDMNGFHATM----KANQLSAGRVAAAKTFLDVHQLEELKQMGIAP 476

Query: 533 TDDSFKFIWFQDHKSVIKAIY---TGSEFIESVVPGNE----VGIVLASSSFYAEQGGQI 585
           T+D+ K+IW ++  + +KAI+   TG+ F++ ++PG E    +G+++  ++FYAE GGQI
Sbjct: 477 TEDAAKYIW-KNRTAEVKAIFNKKTGT-FVDMLMPGEEGEEDIGLIMDVTNFYAESGGQI 534

Query: 586 FDEG-FIEGLFGSFYVRNVQIYGGFVIHIGSL---TEGAGRFSVGEEVICKVDYDRRKLI 641
           +D G  +      F V+ V   GG+V+H+G +      A    V   V  +VDY RR  I
Sbjct: 535 YDTGRIVAAADAVFEVKKVYNLGGYVVHLGRMMTTNSTAVPIPVTSSVDLQVDYKRRIAI 594

Query: 642 APNHTCTHMLNFALREVLGD-------HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIE 694
           A NH+ TH+LN+ LR VL D        V QKGS+V  E LRFDFS+   V  E L +IE
Sbjct: 595 AANHSMTHVLNWCLRRVLEDEAPESYMEVQQKGSLVTEEMLRFDFSYNSRVSQEDLAKIE 654

Query: 695 SIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENK 754
             +NE+I+  L V+ KE  L +AK I GLR +FGE YPDPV V+++G  V+DLLA PE+ 
Sbjct: 655 KALNEKIQQGLVVYRKEVELEKAKHIVGLRQMFGEKYPDPVSVISVGVPVDDLLAKPESA 714

Query: 755 EWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITA------------------- 795
           EW + + E CGGTHLSN +EAE   +LSEE + KG+RRI                     
Sbjct: 715 EWRAYAVEFCGGTHLSNIKEAEVAVILSEEALMKGVRRIVVATRDAARKARARGELLEKE 774

Query: 796 ----VTTGLAYKAFEAACSLEKEVDDA---SKIEGSLLEK--NQVRKAQ---KKVAEENL 843
               V  G+     ++   L K+V D+     ++ SL E+    VR A    K +A +  
Sbjct: 775 YRDIVAGGMTDSTAKSLSVLNKKVGDSLIPLTVKNSLREEIDGSVRAALANVKAMAAQLR 834

Query: 844 QKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIE------QKGMPVMVFS 897
           +KA       AEA  +   PF + R+    D  A REA+    +      Q  + V +F 
Sbjct: 835 EKATVAGRAEAEAYDAVENPFFVKRLS---DFGAEREALQAYADGFTNAVQGDVGVFLFG 891

Query: 898 TDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQ-GTDAAQV 956
           TD   NKA+    +P K+  +K+L   +W  AA+       GKG G   + Q G  AA V
Sbjct: 892 TD--ANKALALVTLP-KAFTAKKLSAVDWAKAAI-------GKGGGKPHAAQSGLTAADV 941

Query: 957 TPAMDLA-AEFAAMK 970
             AM+ A AE A MK
Sbjct: 942 DVAMEKALAEAAKMK 956


>gi|330934785|ref|XP_003304705.1| hypothetical protein PTT_17354 [Pyrenophora teres f. teres 0-1]
 gi|311318587|gb|EFQ87206.1| hypothetical protein PTT_17354 [Pyrenophora teres f. teres 0-1]
          Length = 966

 Score =  803 bits (2075), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 423/782 (54%), Positives = 539/782 (68%), Gaps = 25/782 (3%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           EW A +VR TF  +F+++ H    SS VVP++DPTLLF NAGMNQYK IF GT DP++  
Sbjct: 9   EWSAARVRQTFLDYFKERGHTFVPSSSVVPLSDPTLLFTNAGMNQYKSIFQGTVDPSSDF 68

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
           ++L RA N+QKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK EAI + WELLT
Sbjct: 69  AQLKRAANSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIGFTWELLT 128

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
            VY +   RLY TYF G +  GL PD EA+++W    +P   +LP   KDNFWEMGD GP
Sbjct: 129 GVYGIDPQRLYVTYFEGAD--GLEPDLEAKELWKSVGVPEDHILPGDMKDNFWEMGDQGP 186

Query: 236 CGPCSEIHYDRT-----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHV 290
           CGPCSE+HYD         R+ ASLVN DDP  IEIWN VF+Q+NRE D SL+PLP KH+
Sbjct: 187 CGPCSEVHYDLREPEGGKYRNVASLVNMDDPEVIEIWNNVFMQYNREPDRSLRPLPNKHI 246

Query: 291 DTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVV 350
           DTG+G+ERL S+LQ+K SNYDTDVF P+F  IQ  TGAR Y GK GA+D D +D AYRVV
Sbjct: 247 DTGMGYERLVSVLQHKKSNYDTDVFTPLFKKIQDITGAREYRGKFGAEDPDGIDTAYRVV 306

Query: 351 ADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVM 409
           ADH+R +SFAIADG  P N GR YV+RR+LRR  RY  +  +   G FF+ +V  +V+ M
Sbjct: 307 ADHVRMMSFAIADGGVPNNVGRGYVVRRVLRRGARYARKYFETDIGDFFSKIVPTLVEQM 366

Query: 410 GDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK---VLSGQDAFILW 466
           GD+FPE+K+++  I EI+  EE +F K+L +G   F+K AQ  + K    L G D + L+
Sbjct: 367 GDMFPEIKKKQQDIIEILDEEEKAFAKSLDRGEVIFEKYAQKAKVKGSDALPGDDVWRLY 426

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIV-MDADATAAL 525
           DTYGFP+DLT+LMAEERGL +D +  ++A ++ARE S+   +K+A GA+V  D     AL
Sbjct: 427 DTYGFPVDLTKLMAEERGLKIDDKEVDDAQEKAREASKG--DKKAAGALVKFDVHDLGAL 484

Query: 526 HKR-GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESV--VP-GNEVGIVLASSSFYAEQ 581
                V  TDDS K+   ++  SVIKAIY   +F++S   VP G + G++L  ++FYAEQ
Sbjct: 485 ENMPDVPKTDDSAKY-GRENITSVIKAIYHNKKFLKSTKEVPEGEQFGVLLDRTNFYAEQ 543

Query: 582 GGQIFDEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRK 639
           GGQ +D G   ++G      + NVQ+Y G+V+H G L    G  SVG EVI + D  RR 
Sbjct: 544 GGQEYDTGKLLVDGE-AEISIDNVQVYAGYVLHTGYLK--YGELSVGSEVIAEFDELRRH 600

Query: 640 LIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNE 699
            I  NHT TH+LN+ALREVLG+ VDQKGS+V PEKLRFDFSH   +    L ++ESI ++
Sbjct: 601 PIRNNHTGTHVLNYALREVLGNEVDQKGSLVAPEKLRFDFSHKAGLSDAELDKVESISSK 660

Query: 700 QIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSI 759
            IK +  V++K+  LA AK I G+RAVFGE YPDPVRVV++G  VE+LLAD +N++W  +
Sbjct: 661 YIKEDAQVYAKDVPLASAKEIRGVRAVFGETYPDPVRVVSVGVPVEELLADVKNEKWEKL 720

Query: 760 SAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDAS 819
           S E CGGTH+  T E +   +L E GIAKGIRRI AVT   AY     A   ++ V+   
Sbjct: 721 SIEFCGGTHVLKTGEIKELVILEESGIAKGIRRIVAVTGQEAYSVQRLAAEFQERVEAMG 780

Query: 820 KI 821
           K+
Sbjct: 781 KM 782


>gi|169603389|ref|XP_001795116.1| hypothetical protein SNOG_04704 [Phaeosphaeria nodorum SN15]
 gi|160706385|gb|EAT88464.2| hypothetical protein SNOG_04704 [Phaeosphaeria nodorum SN15]
          Length = 960

 Score =  803 bits (2074), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 434/866 (50%), Positives = 558/866 (64%), Gaps = 48/866 (5%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           EW A KVR TF  +F+   H    SS VVP++DPTLLF NAGMNQYK IF GT DP++  
Sbjct: 9   EWGAKKVRQTFLDYFKKNGHSFVPSSSVVPLSDPTLLFTNAGMNQYKSIFQGTVDPSSDF 68

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
           + L RA N+QKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK EAI + WEL+T
Sbjct: 69  ASLKRAANSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIGFTWELMT 128

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
           KVY +  +RLY TYF G +  GL PD EA+++W    +P   +LP   KDNFWEMGD GP
Sbjct: 129 KVYGIDPNRLYVTYFEGAD--GLEPDLEAKELWKSAGVPEDHILPGDMKDNFWEMGDQGP 186

Query: 236 CGPCSEIHYDRT-----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHV 290
           CGPCSE+HYD         R+A+ LVN DDP  IEIWN VF+Q+NRE D SL+PLP KH+
Sbjct: 187 CGPCSEVHYDLREPVDGKYRNASDLVNKDDPEVIEIWNNVFMQYNREPDRSLRPLPNKHI 246

Query: 291 DTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVV 350
           DTG+GFERL S+LQ KMSNYDTDVF P+F  IQ  TGARPY+GK G +D D +D AYRVV
Sbjct: 247 DTGMGFERLVSVLQKKMSNYDTDVFTPLFKRIQDITGARPYNGKFGKEDPDGIDTAYRVV 306

Query: 351 ADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVM 409
           ADH R +SFAIADG  P N GR YV+RR+LRR  RY       + G FF+ ++  +V+ M
Sbjct: 307 ADHTRMMSFAIADGGVPNNVGRGYVVRRVLRRGARYARNYFGVEIGNFFSKIIPTLVEQM 366

Query: 410 GDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKK---AAQDVQGKVLSGQDAFILW 466
           GD+FPE+K+++  I EI+  EE +F K+L +G   FKK    AQ      L G D + L+
Sbjct: 367 GDMFPEIKKKQQDIIEILDEEEKAFAKSLDRGETIFKKYVAKAQKAGSNDLPGDDVWRLY 426

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIV-MDADATAAL 525
           DTYGFP+DLT+LMAEE GL ++ +    A ++ARE S+   +K A G +V  D    AAL
Sbjct: 427 DTYGFPVDLTKLMAEENGLNINDKEVEEAQEKAREASKG--DKAAAGVVVKFDVHDLAAL 484

Query: 526 HKR-GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESV--VP-GNEVGIVLASSSFYAEQ 581
                V  TDDSFK+   ++  + IKAIY   +F++S   VP G + G++L  ++FYAEQ
Sbjct: 485 DSMDDVPKTDDSFKY-GRENITTTIKAIYHNKKFLKSTSEVPEGEQFGVLLDKTNFYAEQ 543

Query: 582 GGQIFDEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRK 639
           GGQ +D G   I+G      V NVQ+Y G+V+H G L    G   VG EVI + D  RR 
Sbjct: 544 GGQEYDTGRLLIDGE-AEISVDNVQVYAGYVLHTGYLK--YGELKVGSEVIAEFDELRRN 600

Query: 640 LIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNE 699
            I  NHT TH+LN+ALRE LG+ VDQKGS+V PEKLRFDFSH   +    L+++E I ++
Sbjct: 601 PIRNNHTGTHVLNYALRETLGNEVDQKGSLVAPEKLRFDFSHKAGLTDAELKKVEDISSD 660

Query: 700 QIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSI 759
            I+   +V++K+  LA+AK I GLRAVFGE YPDPVRVV++G  +EDLLAD +N++W  +
Sbjct: 661 YIRQNAEVYAKDVPLAQAKEIRGLRAVFGETYPDPVRVVSVGVPIEDLLADVKNEKWDKL 720

Query: 760 SAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSL-------- 811
           S E CGGTH+  T + +   +L E GIAKGIRR  A         F     L        
Sbjct: 721 SIEFCGGTHVLKTGDIKELVILEESGIAKGIRRQEAYNVQRIGNEFAERIDLFGKMKFSP 780

Query: 812 EKEVD------DASKIEGSLLEKNQVRKAQKKVAEENL--QKAV------KVATETAEAA 857
           EKE +      + +++  S ++K ++R A  K+ +  L  QKA       +V  E     
Sbjct: 781 EKEAEAKKLQLELNQLSISAIKKTELRDAFAKIQKSILDEQKAFAKADNKRVLDEVTNFF 840

Query: 858 ASNGKPFCISRVEVGLDA-AAVREAV 882
               K F + +VE   +   A+ EA+
Sbjct: 841 KDESKTFLVKKVEWSSNVNKAISEAI 866


>gi|221485680|gb|EEE23961.1| alanyl-tRNA synthetase, putative [Toxoplasma gondii GT1]
          Length = 1037

 Score =  802 bits (2072), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 461/979 (47%), Positives = 584/979 (59%), Gaps = 113/979 (11%)

Query: 58  WPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLS 117
           W    VR  + +FFE + H+ + SSPV+P  D TLLF NAGMNQ+KPIFLG  D ++ LS
Sbjct: 24  WSGEAVRGAYLEFFEAQGHLIYPSSPVIPRGDNTLLFINAGMNQFKPIFLGQIDRSSPLS 83

Query: 118 KLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTK 177
           KL R  +TQKCIRAGGKHNDL+DVGKD YHHTFFEMLGNWSFGDYFK EAI WAW+LLT+
Sbjct: 84  KLRRVADTQKCIRAGGKHNDLEDVGKDVYHHTFFEMLGNWSFGDYFKREAIAWAWQLLTE 143

Query: 178 VYRLPADRLYATYFGGDEK-AGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPC 236
           VY++P DRLYA+YFGGD +     PD EARDIWL++LPA+RVLPFG K+NFWEM DTGPC
Sbjct: 144 VYKIPKDRLYASYFGGDPRLPSCPPDEEARDIWLQYLPANRVLPFGAKENFWEMADTGPC 203

Query: 237 GPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGF 296
           GPCSEIHYDR G RDA+SLVN DDP+ +EIWN+VF+Q+NRE DGSL PLPA  VDTG+G 
Sbjct: 204 GPCSEIHYDRIGGRDASSLVNADDPSVLEIWNLVFMQYNREKDGSLTPLPAPCVDTGMGL 263

Query: 297 ERLTSILQNKMSNYDTDVFMPIFDAI-QQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
           ER+ S+LQ+K SNYDTD+F  +FD I + + G RPY GKVG +D D VDMAYRV+ADH R
Sbjct: 264 ERVASVLQDKQSNYDTDLFTALFDKILELSPGLRPYGGKVGEEDKDMVDMAYRVLADHAR 323

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPE 415
            L+ AIADG+ P NEGR YVLRRILRRAVRY  + L   +G F  LV +VV ++G+ FPE
Sbjct: 324 CLTAAIADGAEPSNEGRGYVLRRILRRAVRYARQTLGMAEGNFPKLVPVVVSLLGETFPE 383

Query: 416 LKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG---KVLSGQDAFILWDTYGFP 472
           +K+ E  +  I+  EE  F +TL  G+E+FKK A  +Q    KV  G +AF L+ TYGFP
Sbjct: 384 MKKNEEKVVRILLKEEQQFSRTLDNGVERFKKVANSLQAKGQKVFPGGEAFTLYSTYGFP 443

Query: 473 LDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIV--MDADATAAL-HKRG 529
           LDLTQLMAEE GL VD E F    D  R  S +   KQ G   V  +  D    L   R 
Sbjct: 444 LDLTQLMAEEVGLQVDAEEFERKFDAHRAASENTSFKQGGAGAVYALPPDQRHLLAQSRK 503

Query: 530 VLATDDSFKFIW---------FQDH------KSVIKAIYTGSEF------IESVVPGNEV 568
           V  TDDS K+ W          QD       K+ + AI+ G  F      + S    N V
Sbjct: 504 VPPTDDSAKYEWNVMNQAALMTQDAVEAAPIKAKVMAIWDGKRFAPEVTAVASPTGENLV 563

Query: 569 GIVLASSSFYAEQGGQIFDEGFIEGLF--GSFYVRNVQIYGGFVIHIGSLTEGAGRFSVG 626
            ++L  + FYAEQGGQI D G +  L     F V + Q  G F++HIGS+++G  R   G
Sbjct: 564 AVILDKTCFYAEQGGQIGDVGRLVDLSSQAEFEVVDSQKSGDFILHIGSMSKGTLR--EG 621

Query: 627 EEVICKVDYDRRKLIAPNHTCTHMLNFALREVL--------------------------- 659
            E++  VDY RR  +A +HT TH+LNFALREVL                           
Sbjct: 622 TELVPAVDYVRRFRLAQHHTGTHLLNFALREVLIRKLRSGGKASANGDKREDTNGLRICE 681

Query: 660 ----------GDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
                     G+ + QKGS+V  ++LRFD++  KP++ E +  +E++V + I     V  
Sbjct: 682 SCLNEKELEDGEDIQQKGSLVEVKRLRFDYAGEKPLENEDIIAVENVVKDCIAQARPVHY 741

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDL--LADPENKEWLSISAELCGGT 767
           KE  L +A  I GLRAVFGEVYPDPVRVV++G  +E L  LAD    E    S ELCGGT
Sbjct: 742 KEVPLEQAMKIPGLRAVFGEVYPDPVRVVSVGEDIESLVALADSSQPETPFASIELCGGT 801

Query: 768 HLSNTREAEAFALLSEEGIAKGIRRITAVTTGL-------------AYKAFEAA----CS 810
           HL N  +   F +LSEE +AKG+RR+ A                  A+++  +A     +
Sbjct: 802 HLHNASQLSDFCILSEESVAKGVRRVVAAAGDAAFEARKELEELEEAFRSLASAPRELAA 861

Query: 811 LEKEVDDAS---------KIEGSLLEKNQVRKAQKKVAEENLQKA-----VKVATETAEA 856
           LEKEV  A           + G      Q+ +AQK + E  LQKA     VK A +  E 
Sbjct: 862 LEKEVAKARGLLDGAGPLPLVGKRSLVKQLEQAQKALLE--LQKARSKELVKEAKKLGEE 919

Query: 857 AAS--NGKPFCISRVEVGLDAAAVREAVLKVIEQKG--MPVMVFSTDETTNKAVVCAGVP 912
             +    KPF +  +   L      +A  + + Q    +P ++ +    T  A + A VP
Sbjct: 920 LGTEHKTKPFLVLNLPQLLGDGKALDAASQTLHQAAPDLPFLLVTASAATGTAAI-AFVP 978

Query: 913 EKSDQSKQLEVSEWLTAAL 931
                  QL  + WLTA +
Sbjct: 979 AACS---QLHAASWLTACV 994


>gi|237842821|ref|XP_002370708.1| alanyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
 gi|211968372|gb|EEB03568.1| alanyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
          Length = 1037

 Score =  801 bits (2070), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 461/979 (47%), Positives = 584/979 (59%), Gaps = 113/979 (11%)

Query: 58  WPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLS 117
           W    VR  + +FFE + H+ + SSPV+P  D TLLF NAGMNQ+KPIFLG  D ++ LS
Sbjct: 24  WSGEAVRGAYLEFFEAQGHLIYPSSPVIPRGDNTLLFINAGMNQFKPIFLGQIDRSSPLS 83

Query: 118 KLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTK 177
           KL R  +TQKCIRAGGKHNDL+DVGKD YHHTFFEMLGNWSFGDYFK EAI WAW+LLT+
Sbjct: 84  KLRRVADTQKCIRAGGKHNDLEDVGKDVYHHTFFEMLGNWSFGDYFKREAIAWAWQLLTE 143

Query: 178 VYRLPADRLYATYFGGDEK-AGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPC 236
           VY++P DRLYA+YFGGD +     PD EARDIWL++LPA+RVLPFG K+NFWEM DTGPC
Sbjct: 144 VYKIPKDRLYASYFGGDPRLPSCPPDEEARDIWLQYLPANRVLPFGAKENFWEMADTGPC 203

Query: 237 GPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGF 296
           GPCSEIHYDR G RDA+SLVN DDP+ +EIWN+VF+Q+NRE DGSL PLPA  VDTG+G 
Sbjct: 204 GPCSEIHYDRIGGRDASSLVNADDPSVLEIWNLVFMQYNREKDGSLTPLPAPCVDTGMGL 263

Query: 297 ERLTSILQNKMSNYDTDVFMPIFDAI-QQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
           ER+ S+LQ+K SNYDTD+F  +FD I + + G RPY GKVG +D D VDMAYRV+ADH R
Sbjct: 264 ERVASVLQDKQSNYDTDLFTALFDKILELSPGLRPYGGKVGEEDKDMVDMAYRVLADHAR 323

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPE 415
            L+ AIADG+ P NEGR YVLRRILRRAVRY  + L   +G F  LV +VV ++G+ FPE
Sbjct: 324 CLTAAIADGAEPSNEGRGYVLRRILRRAVRYARQTLGMAEGNFPKLVPVVVSLLGETFPE 383

Query: 416 LKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG---KVLSGQDAFILWDTYGFP 472
           +K+ E  +  I+  EE  F +TL  G+E+FKK A  +Q    KV  G +AF L+ TYGFP
Sbjct: 384 MKKNEEKVVRILLKEEQQFSRTLDNGVERFKKVANSLQAKGQKVFPGGEAFTLYSTYGFP 443

Query: 473 LDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIV--MDADATAAL-HKRG 529
           LDLTQLMAEE GL VD E F    D  R  S +   KQ G   V  +  D    L   R 
Sbjct: 444 LDLTQLMAEEVGLQVDAEEFERKFDAHRAASENTSFKQGGAGAVYALPPDQRHLLAQSRK 503

Query: 530 VLATDDSFKFIW---------FQDH------KSVIKAIYTGSEF------IESVVPGNEV 568
           V  TDDS K+ W          QD       K+ + AI+ G  F      + S    N V
Sbjct: 504 VPPTDDSAKYEWNVKDQAALMTQDAVEAAPIKAKVMAIWDGKRFAPEVTAVASPTGENLV 563

Query: 569 GIVLASSSFYAEQGGQIFDEGFIEGLF--GSFYVRNVQIYGGFVIHIGSLTEGAGRFSVG 626
            ++L  + FYAEQGGQI D G +  L     F V + Q  G F++HIGS+++G  R   G
Sbjct: 564 AVILDKTCFYAEQGGQIGDVGRLVDLSSQAEFEVVDSQKSGDFILHIGSMSKGTLR--EG 621

Query: 627 EEVICKVDYDRRKLIAPNHTCTHMLNFALREVL--------------------------- 659
            E++  VDY RR  +A +HT TH+LNFALREVL                           
Sbjct: 622 TELVPAVDYVRRFRLAQHHTGTHLLNFALREVLIRKLRSGGKASANGDKREDTNGIRICE 681

Query: 660 ----------GDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
                     G+ + QKGS+V  ++LRFD++  KP++ E +  +E++V + I     V  
Sbjct: 682 SCLNEKELEDGEDIQQKGSLVEVKRLRFDYAGEKPLENEDIIAVENVVKDCIAQARPVHY 741

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDL--LADPENKEWLSISAELCGGT 767
           KE  L +A  I GLRAVFGEVYPDPVRVV++G  +E L  LAD    E    S ELCGGT
Sbjct: 742 KEVPLEQAMKIPGLRAVFGEVYPDPVRVVSVGEDIESLVALADSSQPETPFASIELCGGT 801

Query: 768 HLSNTREAEAFALLSEEGIAKGIRRITAVTTGL-------------AYKAFEAA----CS 810
           HL N  +   F +LSEE +AKG+RR+ A                  A+++  +A     +
Sbjct: 802 HLHNASQLSDFCILSEESVAKGVRRVVAAAGDAAFEARKELEELEEAFRSLASAPRELAA 861

Query: 811 LEKEVDDAS---------KIEGSLLEKNQVRKAQKKVAEENLQKA-----VKVATETAEA 856
           LEKEV  A           + G      Q+ +AQK + E  LQKA     VK A +  E 
Sbjct: 862 LEKEVAKARGLLDGAGPLPLVGKRSLVKQLEQAQKALLE--LQKARSKELVKEAKKLGEE 919

Query: 857 AAS--NGKPFCISRVEVGLDAAAVREAVLKVIEQKG--MPVMVFSTDETTNKAVVCAGVP 912
             +    KPF +  +   L      +A  + + Q    +P ++ +    T  A + A VP
Sbjct: 920 LGTEHKTKPFLVLNLPQLLGDGKALDAASQTLHQAAPDLPFLLVTASAATGTAAI-AFVP 978

Query: 913 EKSDQSKQLEVSEWLTAAL 931
                  QL  + WLTA +
Sbjct: 979 AACS---QLHAASWLTACV 994


>gi|72389797|ref|XP_845193.1| alanyl-tRNA synthetase [Trypanosoma brucei brucei strain 927/4
           GUTat10.1]
 gi|62360052|gb|AAX80474.1| alanyl-tRNA synthetase, putative [Trypanosoma brucei]
 gi|70801728|gb|AAZ11634.1| alanyl-tRNA synthetase, putative [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|261328581|emb|CBH11559.1| alanyl-tRNA synthetase, putative [Trypanosoma brucei gambiense
           DAL972]
          Length = 966

 Score =  801 bits (2068), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 410/816 (50%), Positives = 537/816 (65%), Gaps = 29/816 (3%)

Query: 55  VVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNT 114
           V EWP  +VR  F  FFE + H    SS VVP NDPTLLF NAGMNQ+K +FLGTADPNT
Sbjct: 5   VTEWPVNRVRQEFVSFFEQRGHTFVPSSAVVPHNDPTLLFTNAGMNQFKNLFLGTADPNT 64

Query: 115 QLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWEL 174
              +LTRA N+Q CIRAGGKHNDLDDVG+DTYHHTFFEMLG+WSFGDYFK EAI W+WEL
Sbjct: 65  DFGRLTRAVNSQLCIRAGGKHNDLDDVGRDTYHHTFFEMLGSWSFGDYFKREAILWSWEL 124

Query: 175 LTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTG 234
           LT+VY+LP DRLYATYF GD   G+  D E++ +WL+ LPASRV+    KDNFWEMGD G
Sbjct: 125 LTEVYKLPKDRLYATYFEGDPANGIEADEESKQLWLQLLPASRVIAGNAKDNFWEMGDVG 184

Query: 235 PCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           PCGPCSEIH+DR G RDAA LVN DDP  +E+WN+VF+QF R + G + PLP  HVDTG+
Sbjct: 185 PCGPCSEIHFDRIGGRDAADLVNKDDPMVLEVWNLVFMQFERRAGGVIVPLPKMHVDTGM 244

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           G ERLTSILQ   SNYDTD + P+FD IQ+ TG      +V  D  D   +AYR VADHI
Sbjct: 245 GLERLTSILQGADSNYDTDAWTPLFDTIQKVTGFEKSYAEVRHDTCDAT-VAYRAVADHI 303

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R L+ A+ADG+ P + GR +VLRRI+RRAVRYG + L A+ GFF+ LV+ VV  +G  F 
Sbjct: 304 RCLTVALADGAMPDSVGRGFVLRRIIRRAVRYGVQFLGAKVGFFHQLVDSVVSSLGPFFK 363

Query: 415 ELKQREA--HIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFP 472
            +++      I+ ++A EE SF +T   G++ F KA  +    V+SG++AFIL D YGFP
Sbjct: 364 HIQEPRTVQRIKGVLADEETSFARTWETGLKHFNKAVAEAVNNVISGENAFILHDRYGFP 423

Query: 473 LDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLA 532
           +DLT L+AE+  + VD+EGF+  M    + S+ +  + A     +D      L   GV  
Sbjct: 424 VDLTSLLAEKANMSVDLEGFHATM----KASQLSSGRVAAAKTFIDVHQLEELKAGGVSP 479

Query: 533 TDDSFKFIWFQDHKSVIKAIY---TGSEFIESVVPGNE-----VGIVLASSSFYAEQGGQ 584
           TDDS K+ W + H + +KAI+   +GS F++ ++P +E     +GI+L  ++FYAE GGQ
Sbjct: 480 TDDSAKYTW-KKHVAEVKAIFDKKSGS-FVDVLLPDSEMGPEDIGIILDVTNFYAEAGGQ 537

Query: 585 IFDEGFIEGLFGSFY-VRNVQIYGGFVIHIG---SLTEGAGR-FSVGEEVICKVDYDRRK 639
           I+D G I     + + VR V   GG+++H+G   S+ +GA     V   V  +VDY+RR 
Sbjct: 538 IYDTGCIVAAPDAIFDVRKVYNVGGYIVHVGGMRSVEDGAAAPIPVTASVELQVDYERRL 597

Query: 640 LIAPNHTCTHMLNFALREVLGD-------HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRR 692
            IA NHT TH+LN+ LR VL +        V+QKGS+V PE LRFDFS+   V  E L +
Sbjct: 598 PIAANHTSTHILNWCLRRVLEEEAKDNFMEVNQKGSLVTPEMLRFDFSYNNKVSLEDLIK 657

Query: 693 IESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPE 752
           +E ++N+ I+  L+V+ KE  L  A  I GLR +FGE YPDPV V+++G  VE L+A+PE
Sbjct: 658 VEKLINQIIQQGLEVYRKEIALDAASRIAGLRHMFGEKYPDPVSVISVGVPVEKLIAEPE 717

Query: 753 NKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLE 812
           ++EW + S E CGGTHLSNT++A+   +LSEE + KGIRR+   T   A KA E   +L+
Sbjct: 718 SEEWRAYSTEFCGGTHLSNTQDAQLAVILSEESLMKGIRRMVVATRDAARKAQEGGKALQ 777

Query: 813 KEVDDASKIEGSLLEKNQVRKAQKKVAEENLQKAVK 848
           +E  +      S      +    KKV +  +   VK
Sbjct: 778 QEYREIMSRPASDAVAKSLSVLNKKVGDSAIPLVVK 813


>gi|340053937|emb|CCC48230.1| putative alanyl-tRNA synthetase [Trypanosoma vivax Y486]
          Length = 960

 Score =  800 bits (2067), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/814 (49%), Positives = 535/814 (65%), Gaps = 26/814 (3%)

Query: 56  VEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQ 115
           +EWP ++VR  F  FFE + H    SS VVP +DPTLLFANAGMNQ+K IFLG ADPNT 
Sbjct: 1   MEWPVSRVRQEFVTFFEQRCHTFVPSSSVVPHDDPTLLFANAGMNQFKNIFLGAADPNTD 60

Query: 116 LSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELL 175
             +LTRA N+Q CIRAGGKHNDLDDVG+DTYHHTFFEMLG+WSFGDYFK EAI+WAWELL
Sbjct: 61  FGRLTRAVNSQMCIRAGGKHNDLDDVGRDTYHHTFFEMLGSWSFGDYFKREAIKWAWELL 120

Query: 176 TKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGP 235
           T+V+++P ++LY TYF GD+  G+  D EA+++WL+ LP + V+P   KDNFWEMGD GP
Sbjct: 121 TEVFKIPKEQLYVTYFEGDKLNGMEADEEAKEVWLELLPPNHVIPGNTKDNFWEMGDIGP 180

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPCSEIHYDR GNRDA++ VN DDP  IE+WN+VF+QF R +DG +  LP  HVDTG+G
Sbjct: 181 CGPCSEIHYDRIGNRDASAFVNKDDPMVIEVWNLVFMQFERRTDGQMVKLPKAHVDTGMG 240

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
            ERLTSILQ   SNYDTD + P+FDAIQ+ TG      ++ +DD     +AYR VADHIR
Sbjct: 241 LERLTSILQGVHSNYDTDAWTPLFDAIQKVTGFDKSYTEIRSDDRCDATVAYRAVADHIR 300

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPE 415
            L+ A+ADG+ P + GR +VLRRI+RRAVRYG + L A+ GFF+ LV+ VV  +G  F  
Sbjct: 301 CLTVALADGAMPDSVGRGFVLRRIIRRAVRYGVQFLGAKVGFFSQLVDAVVASLGPFFKH 360

Query: 416 LKQ-REAH-IREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPL 473
           L++ R  H I+ +IA EEASF KT   G++ F KA  +     +SG+ AFIL D YGFP+
Sbjct: 361 LQEPRTVHRIKTVIADEEASFAKTWETGLKHFNKAVAEAVNSTISGEHAFILHDRYGFPV 420

Query: 474 DLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLAT 533
           DLT L+AE+  + VD+EGF+  M    + S+ +  + A     +D      L    V  T
Sbjct: 421 DLTNLLAEKANMHVDMEGFHATM----KASQLSAGRVAAAKTFIDVHQLEELKNNDVKPT 476

Query: 534 DDSFKFIWFQDHKSVIKAIYTGS--EFIESVVPG-----NEVGIVLASSSFYAEQGGQIF 586
           DDS K++W +D  + +KAI      EF + ++P       ++GIVL  ++FYAE GGQI+
Sbjct: 477 DDSAKYVW-KDCTAEVKAILNKKTGEFTDMLLPDATSGPEDIGIVLDVTNFYAESGGQIY 535

Query: 587 DEGFIEGLFGS-FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVIC----KVDYDRRKLI 641
           D G I     + F VR V   GGFV+H+G++            V C    +VDY+RR  I
Sbjct: 536 DTGLIVAAPDAVFEVRKVYNVGGFVVHVGNMLRNGYTAPTPIPVSCSVELRVDYERRLPI 595

Query: 642 APNHTCTHMLNFALREVLGD-------HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIE 694
           A NHT TH+LN+ LR VL +        + QKGS+V  E LRFDFS+   V  E L ++E
Sbjct: 596 AANHTSTHLLNWCLRRVLEEEAPGNFMEIQQKGSLVTDEMLRFDFSYNNKVPQEDLIKVE 655

Query: 695 SIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENK 754
            ++N++I   L V+ KE  L+ A+ + GLR +FGE YPDPV V+++G  VE+L+ADPE +
Sbjct: 656 KLLNQKINEGLQVYRKEVPLSLARRVKGLRQMFGEKYPDPVSVISLGAPVEELIADPEKE 715

Query: 755 EWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKE 814
           EW S S E CGGTHLSN ++A+   ++SEE + KG+RR+  +T   A KA     SL KE
Sbjct: 716 EWGSYSVEFCGGTHLSNLQDAQVAVIISEESLMKGVRRMVVMTRDAARKALFEGESLRKE 775

Query: 815 VDDASKIEGSLLEKNQVRKAQKKVAEENLQKAVK 848
           + +   +  S     ++    KKV +  +   VK
Sbjct: 776 LQEILSLPTSDATVKRLSVLNKKVGDSAIPLIVK 809


>gi|403419671|emb|CCM06371.1| predicted protein [Fibroporia radiculosa]
          Length = 921

 Score =  800 bits (2065), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 450/922 (48%), Positives = 582/922 (63%), Gaps = 59/922 (6%)

Query: 81  SSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDD 140
           SS  +P  DPTLLFANAGMNQ+K IFLGT DP ++L++L RA N+QKCIRAGGKHNDL+D
Sbjct: 4   SSSTIPYEDPTLLFANAGMNQFKSIFLGTVDPQSELARLRRAFNSQKCIRAGGKHNDLED 63

Query: 141 VGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLA 200
           VGKD+YHHTFFEMLGNWSF       AI ++WELLT+VY+LP DRLY TYF GD   GL 
Sbjct: 64  VGKDSYHHTFFEMLGNWSF-------AIAFSWELLTEVYQLPKDRLYVTYFEGDPLNGLD 116

Query: 201 PDNEARDIWL-KFLPASRVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNND 259
            DNEAR  W+ + +    +LP   KDNFWEMG TGPCGPCSEIH+DR G R+AA LVN D
Sbjct: 117 ADNEARKFWIAQGIAEDHILPGNAKDNFWEMGATGPCGPCSEIHFDRIGGRNAAHLVNKD 176

Query: 260 DPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIF 319
           DP  +EIWN VF+Q+NRE DGSL+ LPA+HVDTG+GFERL SI+Q K SNYDTD+F PIF
Sbjct: 177 DPDVLEIWNNVFMQYNREDDGSLRVLPAQHVDTGMGFERLVSIIQGKRSNYDTDIFTPIF 236

Query: 320 DAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRI 379
             IQ+ TGARPY GK GADD D VD AYRV+ADH+RTL+FA++DG  P N GR YVLRRI
Sbjct: 237 SRIQELTGARPYQGKFGADDEDGVDTAYRVIADHVRTLTFALSDGGVPNNVGRGYVLRRI 296

Query: 380 LRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTL 438
           LRR  RY  +      G FF+ L+  V++ +GDVFPE+ +R   I+EI+  EE SF +TL
Sbjct: 297 LRRGCRYARKKFGVNIGTFFSSLMPTVIQQLGDVFPEITKRTEEIQEILNEEEESFSRTL 356

Query: 439 LKGIEKFKKAAQDV--QGKV-LSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNA 495
            +G   F +    V  QG+  LSG+D + L+DTYGFP+DLT+LMA+E GL V+ E F+ A
Sbjct: 357 DRGERLFDQYVSRVKQQGRSELSGKDVWRLYDTYGFPVDLTRLMADELGLNVNDEEFDAA 416

Query: 496 MDEARERSRSAQNKQAGGAIVMDADATAALHKR-GVLATDDSFKFIWFQDHKSVIKAIYT 554
             +++E S++   K    AI +D    A L K  GV  TDD+ K++       ++ AIY+
Sbjct: 417 QAQSKEASKANPKKGDKEAIKLDVHDIAELEKTLGVAKTDDTTKYMPGNVIAHIV-AIYS 475

Query: 555 GSEFIESVVP---GNEVGIVLASSSFYAEQGGQIFDEG--FIEGLFGSFYVRNVQIYGGF 609
              F+ S        + GIVL  +SFYAE GGQ FD G   I+G+   F V NVQ++ G+
Sbjct: 476 NRSFVTSTSTTSRDEDFGIVLDRTSFYAESGGQEFDTGSIIIDGV-AEFEVANVQVFNGY 534

Query: 610 VIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSV 669
           V+HIG L    G   VG EVI   D  RR  +  NHT TH+LNF LR+VLGDH+DQKGS+
Sbjct: 535 VLHIGHLK--YGDLQVGNEVISSYDELRRWPLRNNHTATHILNFCLRDVLGDHIDQKGSL 592

Query: 670 VLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGE 729
           V P KLRFDFSH   +    L RIE +  + I+  + V+SKE  L  A+ I GLRAVFGE
Sbjct: 593 VAPTKLRFDFSHKAQIPASELTRIEEMSRDWIRRNVPVYSKEVGLRVAQSIPGLRAVFGE 652

Query: 730 VYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKG 789
            YPDPVRVV++G  V++++ D  N +W S S ELCGGTH+  T +   F +  E GIAKG
Sbjct: 653 AYPDPVRVVSLGFDVDEIITDISNPKWRSTSIELCGGTHVMKTGDITDFIVTEESGIAKG 712

Query: 790 IRRITAVTTGLAYKAFEAACSLEKEVD-------------------DASKIEGSLLEKNQ 830
           IRRI AVT   A +A + A +L+ +++                   D  + + S+L+K +
Sbjct: 713 IRRIVAVTGHEAAQARQKANALQAQLNRLETMNSIEKDTGLKAFTFDLGQADISVLKKAE 772

Query: 831 VRK---AQKKVAEENLQKAVKVATETAEAAASN------GKPFCISRVEVGLDAAA---V 878
           +R      +KV +  +++  K AT T  AAAS+        P   +   + LD  A   V
Sbjct: 773 LRDRLAVVRKVFDREMKE--KEAT-TIRAAASDVLAYFEANPGSDAYFAI-LDVTANTKV 828

Query: 879 REAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRC 938
            +AV +  ++ G  V VFS+D    K      V E + ++K L+   W       L G+ 
Sbjct: 829 LQAVAQQAKKLGKSVYVFSSDYAEGKVGHINCVSEAA-KAKGLDARNWAAVVTDILGGKA 887

Query: 939 GKGKGGLASGQGTDAAQVTPAM 960
           G GK     G G +  Q+  A+
Sbjct: 888 G-GKDESVQGVGVNIGQLRDAL 908


>gi|345495930|ref|XP_003427602.1| PREDICTED: LOW QUALITY PROTEIN: alanyl-tRNA synthetase,
           cytoplasmic-like [Nasonia vitripennis]
          Length = 1152

 Score =  800 bits (2065), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 433/970 (44%), Positives = 571/970 (58%), Gaps = 93/970 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A  +R  +  FF+ K+H    SS  +P +DPTLLF NAGMNQ+KPIFLGT DPN+ ++K 
Sbjct: 6   AKDIRQAYIDFFKSKDHEYVHSSSTIPHDDPTLLFTNAGMNQFKPIFLGTVDPNSDMAKW 65

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  N+QKCIRAGGKHNDLDDVGKD YHHTFFEM+GNWSFGDYFK E  EWAWE LT+  
Sbjct: 66  VRVVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMMGNWSFGDYFKKEICEWAWEFLTQKL 125

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            LPADRLY TYFGGDEK+ L PD E ++ WL   +P S VLP   KDNFWEMG+TGPCGP
Sbjct: 126 NLPADRLYVTYFGGDEKSNLKPDEECKNFWLSLGVPESHVLPGSMKDNFWEMGETGPCGP 185

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSE+HYDR G R+AA LVN DDP  +EIWN+VFIQ+NRE +G L+PLP KH+D GLG ER
Sbjct: 186 CSELHYDRIGGREAAHLVNMDDPDVLEIWNLVFIQYNREQNGELQPLPKKHIDCGLGLER 245

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S++QNK SNYDTD+F P+F+AIQ+ TGA  Y G+VG DD D +DMAYRV+ADH RT++
Sbjct: 246 LVSVIQNKRSNYDTDLFTPLFEAIQKGTGAPAYQGRVGNDDKDGIDMAYRVLADHARTIT 305

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YV+RRILRRAVRY +E L AQ GFF  L+N+VV+++GDVFPE+K+
Sbjct: 306 IALADGGVPDNTGRGYVIRRILRRAVRYATEKLNAQPGFFATLINVVVELLGDVFPEVKR 365

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG-KVLSGQDAFILWDTYGFPLDLTQ 477
               I +I+  EE  F KTL +G     +    ++  KV+ G  A+ L+DTYGFP+DLTQ
Sbjct: 366 DPQSIIDIVNEEEVQFLKTLSRGRNLLNRTIAKLESTKVVPGDVAWRLYDTYGFPVDLTQ 425

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA---IVMDADATAALHKRGVLATD 534
           LMAEE+GL +D+  +    +EA++ +  A   +AGG    I +D  A   L  +GV  TD
Sbjct: 426 LMAEEKGLTIDVAAY----EEAKKLAIIASQGKAGGVNDQINLDVHAITELQNKGVKTTD 481

Query: 535 DSFKFIW------------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQG 582
           DS K+ +            F      + A+     F++ V  G+EVG++L  ++FYAEQG
Sbjct: 482 DSPKYNYKVAKTEKYAEYTFAPCTGTVLALRKDKTFVDEVKSGDEVGVLLDQTNFYAEQG 541

Query: 583 GQIFDEGF---IEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRK 639
           GQI+DEGF   ++       V NVQ+ GG+V+HIG++  G G    G+++   VD  RR+
Sbjct: 542 GQIYDEGFLVKVDDESTEIRVTNVQVRGGYVLHIGTV--GEGTLKKGDKLYLNVDTSRRR 599

Query: 640 LIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNE 699
           LI  NHT TH LN ALR VLG                                       
Sbjct: 600 LIMSNHTATHALNHALRSVLGTDXXXX----------------------------XXXXX 631

Query: 700 QIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSI 759
                   ++KE+ LA A+ I GLRA+FGE YPDPVRVV++G  VE+L  DP +      
Sbjct: 632 XXXXXXXXYAKESPLAIARTIQGLRAMFGETYPDPVRVVSMGVTVEELEKDPLSPAGAKT 691

Query: 760 SAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDAS 819
           S E CGGTHL  T     F + SEE IAKGIRRI A+T   A KA + A  L+  ++   
Sbjct: 692 SVEFCGGTHLHRTGHIGDFVIASEEAIAKGIRRIVALTGPEASKALKKAELLQNNLNQIK 751

Query: 820 KIEGSLLEKNQVRKAQKKVAE---------------ENLQ---KAVKVATETAEAA---- 857
               ++ +    ++  KK+ E               E ++   KA+K A +  E +    
Sbjct: 752 SSVETVKDSATSKEIVKKIVELTDDVSHAVIPYWKKEEMRSELKALKKALDDKERSAKAA 811

Query: 858 --------------ASNGKPFCISRVEVGLDAAAVREAVLKVIE-QKGMPVMVFSTDETT 902
                         ++ G P  +  +    +  A+  A+ KV         +  S DE  
Sbjct: 812 VANAVVETAVNIIESNKGAPVLVEVLNAFNNTKALDAALKKVKAISPETSALFISVDEDE 871

Query: 903 NKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDL 962
            K    + VP KS  +K L+ +EW+ A    ++GR G GK   A   G + + +  A+  
Sbjct: 872 KKIFALSAVP-KSAIAKGLKANEWIQAIASMMQGRGG-GKPESAQASGPNISCLKEALAT 929

Query: 963 AAEFAAMKLR 972
           A  +A   L+
Sbjct: 930 AKTYAYSVLK 939


>gi|47937910|gb|AAH71378.1| Aars protein, partial [Danio rerio]
          Length = 757

 Score =  799 bits (2064), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 403/747 (53%), Positives = 509/747 (68%), Gaps = 26/747 (3%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R+ F  FF    H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  +++L
Sbjct: 7   AAQIREKFIDFFRRHEHQYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMARL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK+ A + A ELLT+ +
Sbjct: 67  RRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKHLACKMALELLTQEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +P +RLY TYFGG   AGL PD E + IWL   +  SR+LP   KDNFWEMGDTGPCGP
Sbjct: 127 GIPIERLYVTYFGGHADAGLEPDLECKQIWLDLGMEESRILPGSMKDNFWEMGDTGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G RDAA LVN DDP  +EIWN+VFIQFNRES+  LKPLP K +DTG+G ER
Sbjct: 187 CSEIHYDRIGGRDAAHLVNMDDPNVLEIWNLVFIQFNRESETVLKPLPKKSIDTGMGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+F+P F+AIQ+ TGAR Y+GKVGA+D D +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFVPYFEAIQKGTGARAYTGKVGAEDTDGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A++DG  P N GR YVLRRILRRAVRY  E L AQ GFF  LV++VV+ +GD FPEL++
Sbjct: 307 IALSDGGRPDNTGRGYVLRRILRRAVRYSHEKLGAQRGFFASLVDVVVESLGDAFPELRK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
               +++II  EEA F KTL +G     +  Q +     + G  A++L+DTYGFPLDLT 
Sbjct: 367 DPDMVKDIINEEEAQFLKTLSRGRRILDRKIQSLGDSTTIPGDTAWLLYDTYGFPLDLTA 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
           L+AEERG+ VD+  F      A+ +S   Q K +G    I++D  A   L  +GV ATDD
Sbjct: 427 LIAEERGMGVDLLAFEEEKKAAQLKS---QGKGSGDEDHIMLDIYAIDELRNKGVAATDD 483

Query: 536 SFKFIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           S K+ +         F+     + A+     F++ V+ G E G++L  +SFYAEQGGQ F
Sbjct: 484 SPKYKYTSDDNGNYEFEQAVGTVLALRRERMFVDEVITGQECGVLLDKTSFYAEQGGQSF 543

Query: 587 DEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           DEG++     S      F V+N Q+ GG+V+HIG++    G   VG+ +   VD  RR+ 
Sbjct: 544 DEGYMLRENDSAEDRMEFTVKNTQVRGGYVLHIGTVY---GTLKVGDRLTLHVDEARRRP 600

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           I  NHT TH+LN+ LR VLG+  DQ+GS+V P++LRFDF+    +  + +RR E I    
Sbjct: 601 IMSNHTATHILNYGLRSVLGE-ADQRGSLVAPDRLRFDFTAKGAMSTDEVRRTEEIAAAM 659

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I     V++ +A LA AK I GLRAVF E YPDPVRVV+IG  VE+LLADP +      S
Sbjct: 660 IADAKGVYALDAPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVEELLADPNSPAGSLTS 719

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIA 787
            E CGGTHL N+  A  F ++SEE IA
Sbjct: 720 IEFCGGTHLQNSSHAAPFVIVSEEAIA 746


>gi|406865414|gb|EKD18456.1| tRNA synthetase class II [Marssonina brunnea f. sp. 'multigermtubi'
           MB_m1]
          Length = 949

 Score =  799 bits (2063), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 452/958 (47%), Positives = 603/958 (62%), Gaps = 55/958 (5%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           +W A  VR TF +FFE K H    SS VVP NDPTLLF NAGMNQ+KPIFLGT      L
Sbjct: 5   KWTAPVVRKTFLEFFEAKGHTIVPSSSVVPHNDPTLLFTNAGMNQFKPIFLGTVGQTDDL 64

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
           ++L RA +TQKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK EAIE +WELLT
Sbjct: 65  AQLKRAVDTQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKQEAIEMSWELLT 124

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
           KVY L  DRLY TYF GDE AG+ PD EA+D+W K  +    +LP   KDNFWEMGD GP
Sbjct: 125 KVYGLDPDRLYVTYFEGDESAGVEPDLEAKDLWKKVGVADDHILPGNMKDNFWEMGDQGP 184

Query: 236 CGPCSEIHYDRT-GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           CGPCSE+HYDR  G R+AA LVN DDP  +EIWN VFIQF+R+ D SLK LPAKHVDTG+
Sbjct: 185 CGPCSEVHYDRIGGGRNAAHLVNMDDPNVLEIWNNVFIQFDRQKDRSLKTLPAKHVDTGM 244

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           G+ERL S+LQ+K SNYDTDVF+P+F  IQ+ T AR Y+ K G DD D +D AYRV+ADHI
Sbjct: 245 GYERLVSVLQDKSSNYDTDVFLPLFTKIQEVTKARQYTDKYGKDDVDGIDTAYRVIADHI 304

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVF 413
           R L+FAI+DG  P N GR YV+RR+LRR  RY      A+ G FF+ ++  +V+ MG+ F
Sbjct: 305 RLLAFAISDGGVPSNVGRGYVVRRVLRRGARYAESYFNAEIGSFFSKILPALVEQMGEQF 364

Query: 414 PELKQREAHIREIIAAEEASFGKTLLKGIEKFKK-AAQDVQG--KVLSGQDAFILWDTYG 470
           PE+  ++  ++EI+  EE +FG+TL +G+  F+K AA  ++   K LSG D + L+DT+G
Sbjct: 365 PEIVAKQQEVKEILDEEEEAFGRTLKRGLVMFEKYAAHAIKNDSKKLSGDDVWRLYDTFG 424

Query: 471 FPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGV 530
           FP DLT+++AEE+GL  D      A + AR  S   ++     A   D    A L K G+
Sbjct: 425 FPEDLTKILAEEKGLETDDAEIEIAKERARLASMVVKDTSQTFA-KFDVHQIAELDKMGI 483

Query: 531 LATDDSFKFIWFQDHKSVIKAIYTGSEFIES---VVPGNEVGIVLASSSFYAEQGGQIFD 587
              +D  KF    D  + +  +Y G  F++S   + PG   G++L  ++FYAEQGGQ+ D
Sbjct: 484 PRPNDDAKFSK-GDSTAKVSLVYDGKAFLKSTEGLEPGKPFGVLLDKTNFYAEQGGQVAD 542

Query: 588 EG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            G   I+G+   F VR+VQ YGG+++H G L  G+     G+EVIC+ D  RR+ I  NH
Sbjct: 543 TGKIIIDGV-AEFKVRDVQTYGGYIVHNGYLDYGS--LKAGDEVICEYDELRRQPIRNNH 599

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           T TH+LN ALRE LG+ ++QKGS+V  +KLRFDFSH   V    L++IE   N  IK   
Sbjct: 600 TGTHILNHALREHLGEDINQKGSLVDQDKLRFDFSHKAQVSLPELKKIEDSSNAYIKQNC 659

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
           ++++K+  L  AK I G+RAVFGE YP+PVRVV++G  V++LL +P+N +W  +S E CG
Sbjct: 660 EIYAKDVDLDLAKGIEGVRAVFGETYPNPVRVVSVGVPVDELLENPKNPKWREVSVEFCG 719

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVD--------- 816
           GTH+  T   +   ++ E GIAKGIRRI A T   A K    A    K ++         
Sbjct: 720 GTHVEKTGLIKDLVIVEESGIAKGIRRIIAYTGDAAQKVQRDAIEFGKRIEALEKMSHGA 779

Query: 817 -----------DASKIEGSLLEKNQVR----KAQKKVAEENLQKAVKVATETA-EAAASN 860
                      D +++  + L K++++    K QK++ +E  +K  K  ++TA ++   +
Sbjct: 780 EKEAEVKSVQNDLNQLTVATLTKDELKTRLAKVQKEILDEQ-KKRQKAESKTALDSVTGH 838

Query: 861 GKPFCISRVEVG-LDAAAVREAVLKVIEQ-----KGMPVMVFSTDETTNKAVVCAGVPEK 914
                 S+V VG L  +A  +AV  V+       K   V + +     +K+ V  GV + 
Sbjct: 839 FSTNQDSKVFVGALPISANMKAVTDVMNHFKSKAKDKSVYLIA----GSKSEVVHGVYDH 894

Query: 915 SDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKLR 972
           S  SK +    W  A  + L GR G GK    +GQGT+  ++  A+ +A ++ A KL+
Sbjct: 895 S--SKGVTAEHWAAAVSEVLGGRSG-GKEPTRTGQGTNPEKIDEAVKVAEKWIAEKLQ 949


>gi|401412520|ref|XP_003885707.1| hypothetical protein NCLIV_061050 [Neospora caninum Liverpool]
 gi|325120127|emb|CBZ55681.1| hypothetical protein NCLIV_061050 [Neospora caninum Liverpool]
          Length = 1034

 Score =  798 bits (2061), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 420/823 (51%), Positives = 532/823 (64%), Gaps = 69/823 (8%)

Query: 58  WPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLS 117
           W    VR  +  FFE   H+ + SSPV+P  D TLLF NAGMNQ+KPIFLG  D N+ LS
Sbjct: 24  WSGEAVRSAYVDFFEVHGHLIYPSSPVIPRGDNTLLFINAGMNQFKPIFLGQVDRNSPLS 83

Query: 118 KLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTK 177
           KL R  +TQKCIRAGGKHNDL+DVGKD YHHTFFEMLGNWSFGDYFK +AI WAW+LLT+
Sbjct: 84  KLRRVTDTQKCIRAGGKHNDLEDVGKDVYHHTFFEMLGNWSFGDYFKRDAIAWAWQLLTE 143

Query: 178 VYRLPADRLYATYFGGDEK-AGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPC 236
           VY++P DRLYA+YFGGD +     PDNEARD+WL++LP +RVLPFG K+NFWEM DTGPC
Sbjct: 144 VYKIPKDRLYASYFGGDPRLPTCPPDNEARDLWLQYLPPNRVLPFGAKENFWEMADTGPC 203

Query: 237 GPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGF 296
           GPCSEIHYDR G RDA+SLVN DDP+ +EIWN+VF+Q+NRE DGSL PLPA  VDTG+G 
Sbjct: 204 GPCSEIHYDRIGGRDASSLVNADDPSVLEIWNLVFMQYNREKDGSLTPLPAPCVDTGMGL 263

Query: 297 ERLTSILQNKMSNYDTDVFMPIFDAIQQAT-GARPYSGKVGADDADKVDMAYRVVADHIR 355
           ER+ S+LQ+K SNYDTD+F+ +FD I + T G RPY GK+G +D D +DMAYRV+ADH R
Sbjct: 264 ERVASVLQDKQSNYDTDLFIALFDKIAELTPGLRPYEGKIGEEDKDLIDMAYRVLADHAR 323

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPE 415
            L+ AIADG+ P NEGR YVLRRILRRAVRY  + L  ++G F  LV++VV ++G  FPE
Sbjct: 324 CLTAAIADGAEPSNEGRGYVLRRILRRAVRYARQTLGMKEGAFPQLVSVVVSLLGSTFPE 383

Query: 416 LKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG---KVLSGQDAFILWDTYGFP 472
           +K+ E  +  I+  EE  F +TL  G+E+FKK A  ++    KV  G +AF L+ TYGFP
Sbjct: 384 MKKNEEKVIRILHKEEQQFSRTLDNGVERFKKVANSLKAKGVKVFPGSEAFTLYSTYGFP 443

Query: 473 LDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIV--MDADATAALHK-RG 529
           LDLTQLMAEE GL VD E F    D  R  S +   KQ G   V  +  D    L K R 
Sbjct: 444 LDLTQLMAEEVGLQVDAEEFERKFDAHRVASENTSFKQGGAGAVYALPPDQHHLLAKNRN 503

Query: 530 VLATDDSFKFIW-FQDHKSVI--------------KAIYTGSEF------IESVVPGNEV 568
           +  TDDS K+ W  +D  +++               AI+ G  F      + S    N V
Sbjct: 504 LAPTDDSAKYQWNVKDLAALVAQDAVEAAPVKAKVAAIWDGKRFAPDAAAVASPTSENFV 563

Query: 569 GIVLASSSFYAEQGGQIFDEGFIEGLF--GSFYVRNVQIYGGFVIHIGSLTEGAGRFSVG 626
            ++L  + FYAEQGGQ+ D G +  L     F V + Q  G +V+HIG++++G      G
Sbjct: 564 AVILDKTCFYAEQGGQVGDVGRLVDLSSGAEFEVIDSQKSGDYVLHIGTVSKGT--LKEG 621

Query: 627 EEVICKVDYDRRKLIAPNHTCTHMLNFALREVL----------GDH-------------- 662
            E++  VDY RR  +A +HT TH+LNFALREVL          GD               
Sbjct: 622 SELVPLVDYVRRFKLAQHHTGTHLLNFALREVLVRKMRKNAEGGDKREDTNGLHIRESCL 681

Query: 663 ----------VDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEA 712
                     + QKGS+V  ++LRFD++  KP++ E +  +E++V + I  E  V  +E 
Sbjct: 682 NERELSDEEDIQQKGSLVEEKRLRFDYAGEKPMENEDILAVENVVKDCIARERPVHYREI 741

Query: 713 TLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDL--LADPENKEWLSISAELCGGTHLS 770
            L +A  I GLRAVFGEVYPDPVRVV++G  +EDL  LA     E    S ELCGGTHL 
Sbjct: 742 ALEQAMKIPGLRAVFGEVYPDPVRVVSVGSPIEDLVELAVSGKGETPFASIELCGGTHLH 801

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEK 813
           N  + + F ++SEE +AKG+RR+ AVT   A +A +    LEK
Sbjct: 802 NAAQIQDFCIISEESVAKGVRRVVAVTGDPALEARKELEELEK 844


>gi|195577578|ref|XP_002078646.1| GD22412 [Drosophila simulans]
 gi|194190655|gb|EDX04231.1| GD22412 [Drosophila simulans]
          Length = 948

 Score =  798 bits (2060), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 436/970 (44%), Positives = 578/970 (59%), Gaps = 86/970 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A +VR+ +  FF+++ H+   SS  +P++DPTLLFANAGMNQ+KPIFLGTADPN+++SK 
Sbjct: 6   AKEVRNAYLDFFKEQKHIYVHSSSTIPLDDPTLLFANAGMNQFKPIFLGTADPNSEMSKW 65

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFGDYFK E   WAWE LT+  
Sbjct: 66  VRVANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKEICSWAWEFLTQRL 125

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            LP DRLY TYFGGD  +GL PD E + +WL   L    +LP   KDNFWEMG+TGPCGP
Sbjct: 126 ALPKDRLYVTYFGGDAASGLEPDLECKQMWLDLGLKPEHILPGSMKDNFWEMGETGPCGP 185

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSE+H+DR G R    LVN DDP  +EIWN+VFIQ+NRESDGSLK LP KH+D G+GFER
Sbjct: 186 CSELHFDRIGGRSVPELVNMDDPDVLEIWNLVFIQYNRESDGSLKQLPKKHIDCGMGFER 245

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S++QNK SNYDTD+F+P+FDAIQ  TGA PY G+VGADD D +DMAYRV+ADH RT++
Sbjct: 246 LVSVIQNKRSNYDTDLFVPLFDAIQAGTGAPPYQGRVGADDVDGIDMAYRVLADHARTIT 305

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY +E L A+ GFF  LVN VV ++GD FPE+K+
Sbjct: 306 IALADGGTPDNTGRGYVLRRILRRAVRYATEKLNAKPGFFATLVNTVVDLLGDAFPEVKK 365

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK-VLSGQDAFILWDTYGFPLDLTQ 477
              HI +II  EE  F KTL +G     +  + +  +  + G  A+ L+DTYGFP+DLTQ
Sbjct: 366 DPQHIIDIINEEELQFLKTLTRGRNLLNRTIEKLGNQTTIPGDVAWRLYDTYGFPVDLTQ 425

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA-----IVMDADATAALHKRGVLA 532
           LMAEE+ L +D++G+  A      +  S    Q  GA     I +D  A + L ++GV  
Sbjct: 426 LMAEEKSLKIDMDGYEAA------KHNSYVLSQGKGASKIEEINLDVHAISQLQEQGVPP 479

Query: 533 TDDSFKFIW--FQDHK----------SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAE 580
           T+D+FK+ +    D +          S I A+   ++F+  +  G + GIVL  ++FYAE
Sbjct: 480 TNDTFKYKYEAVSDERDSAYNYGVCNSKIVALRFENQFVNEITSGQKAGIVLDKTNFYAE 539

Query: 581 QGGQIFDEGFIEGL---FGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDR 637
            GGQI+D+G +  +      F V  V   GG+++HIG +    G   VG+E+   +D +R
Sbjct: 540 SGGQIYDQGALVKVNDEANEFLVDRVYNRGGYILHIGVV---EGTLKVGDELELHIDVER 596

Query: 638 RKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIV 697
           R L   NH+ TH LN  L +VLG   +QKGS+V+PEKLRFDF+    +  E + + E + 
Sbjct: 597 RWLTMKNHSATHALNHCLLQVLGKDTEQKGSLVVPEKLRFDFNSKAAMTIEQVSKTEQLT 656

Query: 698 NEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWL 757
            E +   + +++KE+ LA AK I GLR+VF EVYPDPVR              P NK   
Sbjct: 657 KEMVYKNVPIYAKESKLALAKKIRGLRSVFDEVYPDPVR--------------PANKPPS 702

Query: 758 SISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV-- 815
           S +A       L  +     F + SEE IAKGIRRI A+T   A KA + + + E+E+  
Sbjct: 703 SFAA----APTLRRSGHIMDFVISSEEAIAKGIRRIVALTGPEALKALKKSEAFEQEIVR 758

Query: 816 ------------DDASKIEGSLLEKNQVRKAQ----KKVAEENLQKAVKVATETAEAA-- 857
                       D  S ++  +    Q+  A     KK    NL K +K   +  E A  
Sbjct: 759 LKATIDNDKSGKDSKSHVKEIVELTEQISHATIPYVKKDEMRNLLKGLKKTLDDKERALR 818

Query: 858 -------ASNGKPFC---------ISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDET 901
                      K  C         + ++E   +  A+  A+ +V  Q      +F + + 
Sbjct: 819 AAVSVTVVERAKALCEANPNATVLVEQLEAFNNTKALDAALKQVRSQLPDAAAMFLSVDA 878

Query: 902 TNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMD 961
            +K + C     KS   K L+ +EW+      L G+ G GK   A   GT+  +V   + 
Sbjct: 879 DSKKIFCLSSVPKSAVEKGLKANEWVQHVSATLGGKGG-GKPESAQASGTNYEKVDEIVQ 937

Query: 962 LAAEFAAMKL 971
           LA++FA  KL
Sbjct: 938 LASKFAQSKL 947


>gi|336262950|ref|XP_003346257.1| hypothetical protein SMAC_05794 [Sordaria macrospora k-hell]
 gi|380093586|emb|CCC08550.1| unnamed protein product [Sordaria macrospora k-hell]
          Length = 961

 Score =  797 bits (2059), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 449/967 (46%), Positives = 603/967 (62%), Gaps = 66/967 (6%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           +W   +VR TF  FF ++ H    SS VVP NDPTLLF NAGMNQ+KPIFLGT      +
Sbjct: 6   QWTGVQVRKTFLDFFAERGHNVVPSSSVVPHNDPTLLFTNAGMNQFKPIFLGTIGKTEDM 65

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
           ++L RA +TQKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK EAI W+WELLT
Sbjct: 66  AQLKRAVDTQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIAWSWELLT 125

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
           KVY L   RLY TYF G    GL PD EA+++WL+  +P   ++P   KDNFWEMGD GP
Sbjct: 126 KVYGLDPQRLYVTYFEGSPDLGLEPDLEAKNLWLEVGVPEDHIIPGNMKDNFWEMGDQGP 185

Query: 236 CGPCSEIHYDRT-GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           CGPCSEIHYD+  G R+AA LVN DDP  +E+WNIVFIQF+R++D SLK LPAKH+DTG+
Sbjct: 186 CGPCSEIHYDKVGGGRNAAHLVNMDDPLVVEVWNIVFIQFDRQADKSLKSLPAKHIDTGM 245

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL S LQ+K SNY TD+F P+F  IQ+ TGAR Y+ K G DD D +D AYRV+ADHI
Sbjct: 246 GFERLVSALQDKTSNYATDIFTPLFAKIQEVTGAREYTDKYGKDDVDGIDTAYRVIADHI 305

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVF 413
           R LSFAIADG+ P N GR YV+RR+LRR  RY  +   A+ G FF+ ++  +V+ MG+ F
Sbjct: 306 RLLSFAIADGAAPNNVGRGYVVRRVLRRGARYARKYFNAEIGTFFSRILPALVEQMGEQF 365

Query: 414 PELKQREAHIREIIAAEEASFGKTLLKGIEKFKK-AAQDVQG--KVLSGQDAFILWDTYG 470
           PEL +++  I+EI+  EE +F  TL +G ++F+K AA  ++   K LSG D + L+DT+G
Sbjct: 366 PELVKKQTDIKEILDEEEVAFAVTLDRGEKQFEKYAALAIKSGKKKLSGADVWRLYDTFG 425

Query: 471 FPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGV 530
           FP DLT+LMAEERGL +D    N A ++ARE S++ +      A  ++    A L     
Sbjct: 426 FPEDLTKLMAEERGLTIDEAEVNEAREKAREASKAVKESVQEFA-KLNVHQIAELETSLN 484

Query: 531 LATDDSFKFIWFQDHKSVIKAIYTGSEFIES---VVPGNEVGIVLASSSFYAEQGGQIFD 587
           +    S       D K  ++ I+ G EF++S   + P   +G++L +++FYAE GGQ+ D
Sbjct: 485 IPRPTSDAKFLKGDAKGKVQLIFNGKEFLKSSKDLPPKTPLGLLLDNTNFYAESGGQVAD 544

Query: 588 EG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            G   I+G+   F V +VQ +GG+++H G +    G  + G+EV C+ D  RR+ I  NH
Sbjct: 545 TGRIIIDGV-AEFKVLDVQEFGGYIVHNGFIE--YGELTEGDEVTCEYDELRRQPIRNNH 601

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           T TH+LN +LREVLGD ++QKGS+V  ++LRFDFSH   +  E +++IE + N  I+  L
Sbjct: 602 TGTHILNHSLREVLGDEINQKGSLVDQDRLRFDFSHKAAIPLEDIKKIEDLSNHYIRQNL 661

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
             +SKE  L  A+ I G+RAVFGE YP+PVRVV+IG +V++LL +P+N EW  IS E CG
Sbjct: 662 KAYSKEVDLDLAREIEGVRAVFGETYPNPVRVVSIGMEVDELLKNPKNPEWRKISVEFCG 721

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKA----------FEAACSLEKEV 815
           GTH+ NT   +   ++ E GIAKGIRRI A T   A++A           E   +L    
Sbjct: 722 GTHVENTGLIKDLIIVEESGIAKGIRRIVAYTGEGAHQAQRDAQVFSDKLEHINALSYGP 781

Query: 816 DDASKIEG----------SLLEKNQVR----KAQKKVAEEN--LQKA-VKVATETAEAAA 858
             A++I+           S+L K ++R    K QK+V +E    QKA  K A +T  +  
Sbjct: 782 QKAAEIKAAAVELDGLTISVLTKEELRTRFTKIQKEVVDEQKKRQKAESKTALDTVASHF 841

Query: 859 SNGKPFCISRVEVG-LDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQ 917
           S  +    S+V VG L  +A  +A+  VI         + T +      V AG   K DQ
Sbjct: 842 SKDEN-KDSKVFVGHLPISANAKAISDVI-------TYYKTKDKERSVYVFAG--SKDDQ 891

Query: 918 ------------SKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAE 965
                       SK +   +W +A    + G+ G GK     G G +  ++  A+  A E
Sbjct: 892 VMHGVYVGTALSSKGVTAEQWTSAVSAVIGGKTG-GKEPSRQGAGAEPEKLEEAVKKAEE 950

Query: 966 FAAMKLR 972
           + + KL+
Sbjct: 951 WLSEKLK 957


>gi|357473871|ref|XP_003607220.1| Alanyl-tRNA synthetase [Medicago truncatula]
 gi|355508275|gb|AES89417.1| Alanyl-tRNA synthetase [Medicago truncatula]
          Length = 635

 Score =  797 bits (2058), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/463 (79%), Positives = 404/463 (87%)

Query: 48  MPGADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFL 107
           MP  +   +EWPA +VRDTF KFFE+KNHV+WKSS VVP+NDPTLLFANAGMNQ+KPIFL
Sbjct: 1   MPETESIDIEWPAKRVRDTFAKFFEEKNHVHWKSSAVVPLNDPTLLFANAGMNQFKPIFL 60

Query: 108 GTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEA 167
           GT DPNT LSKLTRACN QKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK EA
Sbjct: 61  GTVDPNTALSKLTRACNIQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKEEA 120

Query: 168 IEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNF 227
           I WAWELLT+VY LP+DR+Y TYFGGDEK GL PDNEARDIWLKFLP  RVLPFG KDNF
Sbjct: 121 ISWAWELLTEVYNLPSDRIYVTYFGGDEKTGLGPDNEARDIWLKFLPPGRVLPFGSKDNF 180

Query: 228 WEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
           WEMGDTGPCGPCSEIH+DR GNR+A+S VN++DP CIE+WN+VFIQFNRE+DGSLK LPA
Sbjct: 181 WEMGDTGPCGPCSEIHFDRIGNRNASSFVNDEDPNCIELWNLVFIQFNREADGSLKSLPA 240

Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
           KHVDTG+GFERLTSILQ+K SNYDTDVF+PIFDAIQQATGARPYSGKVG  DADKVDMAY
Sbjct: 241 KHVDTGMGFERLTSILQHKNSNYDTDVFVPIFDAIQQATGARPYSGKVGPHDADKVDMAY 300

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RVVADHIRTLS AIADGS PGN GREYVLRRILRRAVRYG EVLKA++GFFNGLVN+V  
Sbjct: 301 RVVADHIRTLSIAIADGSQPGNVGREYVLRRILRRAVRYGREVLKAEEGFFNGLVNVVAN 360

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWD 467
           V+GDVFPELKQ E  IR++I  EE SF + L KGI KF KA + VQG +LSG+ AF L  
Sbjct: 361 VLGDVFPELKQNEERIRKMIQVEEESFSRNLFKGIRKFNKAVEHVQGNILSGEVAFELSH 420

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQ 510
           T+GFPLDLTQLMAEE+   VDIEGF+ AM  ARERS++A  K+
Sbjct: 421 TFGFPLDLTQLMAEEKKFSVDIEGFHRAMKAARERSKTAPKKK 463



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/153 (68%), Positives = 128/153 (83%), Gaps = 2/153 (1%)

Query: 819 SKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAV 878
           +KIE  +L ++Q+RKAQK VAEE+ +KAVK+ TE A+ A S+GK FCIS V+VGLD AAV
Sbjct: 484 NKIE-IVLPQDQMRKAQKHVAEEDKRKAVKITTEKADLAVSDGKYFCISHVDVGLDVAAV 542

Query: 879 REAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRC 938
           REAV KVI+QKG+ VMVFSTDE+TNKAVVCAGVPEK D+ K L+ SEWL+ AL PLKGRC
Sbjct: 543 REAVKKVIDQKGLSVMVFSTDESTNKAVVCAGVPEKGDKGK-LDASEWLSNALGPLKGRC 601

Query: 939 GKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           GKGKGGLA+GQGTDA+ +  AM LA +FA++KL
Sbjct: 602 GKGKGGLATGQGTDASHLNEAMGLAVKFASVKL 634


>gi|452002003|gb|EMD94462.1| hypothetical protein COCHEDRAFT_1131083 [Cochliobolus
           heterostrophus C5]
          Length = 966

 Score =  796 bits (2057), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 423/782 (54%), Positives = 535/782 (68%), Gaps = 25/782 (3%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           EW A +VR TF  +F ++ H    SS VVP++DPTLLF NAGMNQYK IF GT DP++  
Sbjct: 9   EWGAVRVRQTFLDYFRERGHTFVPSSSVVPLSDPTLLFTNAGMNQYKAIFQGTIDPSSDF 68

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
           ++L RA N+QKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK EAI + WELLT
Sbjct: 69  AQLKRAANSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIGFTWELLT 128

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
           KVY +   RLY TYF G ++  L PD EA+++WLK  +P   +LP   KDNFWEMGD GP
Sbjct: 129 KVYGIDPKRLYVTYFEGTDE--LEPDLEAKELWLKAGVPEDHILPGDMKDNFWEMGDQGP 186

Query: 236 CGPCSEIHYD----RTGN-RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHV 290
           CGPCSE+HYD      G  R+AASLVN DDP  IEIWN VF+Q+NRE D SL+PLP KH+
Sbjct: 187 CGPCSEVHYDLREPENGQYRNAASLVNMDDPEVIEIWNNVFMQYNREPDRSLRPLPNKHI 246

Query: 291 DTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVV 350
           DTG+G+ERL S+LQ+K SNYDTDVF P+F  IQ+ TGAR Y GK G +D D +D AYRVV
Sbjct: 247 DTGMGYERLVSVLQHKKSNYDTDVFTPLFHKIQEITGAREYRGKFGDEDPDGIDTAYRVV 306

Query: 351 ADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVM 409
           ADH+R +SFAIADG  P N GR YV+RR+LRR  RY  +      G FF+ +V  +V  M
Sbjct: 307 ADHVRMMSFAIADGGVPNNVGRGYVVRRVLRRGARYARKYFACDIGDFFSKIVPTLVDQM 366

Query: 410 GDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK---VLSGQDAFILW 466
           GD+FPE+++++  I EI+  EE +F K+L +G   F+K AQ  + K    L G D + L+
Sbjct: 367 GDMFPEIRKKQQDIIEILDEEEKAFAKSLDRGETIFEKYAQKAKTKGSDELPGDDVWRLY 426

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIV-MDADATAAL 525
           DTYGFP+DLT+LMAEERGL ++ E    A ++ARE S+   +K+A G +V  D     AL
Sbjct: 427 DTYGFPVDLTKLMAEERGLKINDEEVEVAQEKAREASKG--DKKAAGLLVKFDVHDLGAL 484

Query: 526 HKRG-VLATDDSFKFIWFQDHKSVIKAIYTGSEFIESV--VP-GNEVGIVLASSSFYAEQ 581
                V  TDDS KF   ++  +VIKAIY   +F++S   VP G + G++L  ++FYAEQ
Sbjct: 485 ENMPEVPKTDDSPKF-GRENITAVIKAIYHNKKFLKSTAEVPKGEQFGVLLDRTNFYAEQ 543

Query: 582 GGQIFDEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRK 639
           GGQ FD G   ++G      + NVQ+Y G+V+H G +    G  SVG EVI + D  RR 
Sbjct: 544 GGQEFDTGKLLVDGE-AEISIENVQVYAGYVLHTGYIK--YGELSVGSEVIAEFDELRRH 600

Query: 640 LIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNE 699
            I  NHT TH+LN+ALREVLG+ VDQKGS+V PEKLRFDFSH   +    L ++E I + 
Sbjct: 601 PIRNNHTGTHVLNYALREVLGNEVDQKGSLVAPEKLRFDFSHKAGLSDAELDKVEKISST 660

Query: 700 QIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSI 759
            IK +  V++KE  LA AK I G+RAVFGE YPDPVRVV++G  VE+LL D +N++W  +
Sbjct: 661 YIKEDKQVYAKEVPLASAKEIRGVRAVFGETYPDPVRVVSVGVPVEELLKDVKNEQWEKL 720

Query: 760 SAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDAS 819
           S E CGGTH+  T E +   +L E GIAKGIRRI AVT   AY     A   ++ V+   
Sbjct: 721 SIEFCGGTHVLKTGEIKDLVILEESGIAKGIRRIVAVTGQEAYNVQRVAGEFQERVEAMG 780

Query: 820 KI 821
           K+
Sbjct: 781 KM 782


>gi|340914733|gb|EGS18074.1| cytoplasmic alanyl-tRNA synthetase-like protein [Chaetomium
            thermophilum var. thermophilum DSM 1495]
          Length = 1105

 Score =  795 bits (2053), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 468/1002 (46%), Positives = 629/1002 (62%), Gaps = 58/1002 (5%)

Query: 18   RVLLNPSLT--LAVTNHHHSLISRFSASAVAAMPGADPQVVEWPATKVRDTFFKFFEDKN 75
            RVLL P L+  L V     SL  R   S+ ++        V+W    VR TF  FF ++ 
Sbjct: 111  RVLL-PRLSTGLRVRITPLSLAGRRFYSSRSSTTSPIMTEVKWTGPLVRKTFLDFFAERG 169

Query: 76   HVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKH 135
            H    SS VVP NDPTLLF NAGMNQ+KP+FLGT   +   ++L RA +TQKCIRAGGKH
Sbjct: 170  HTIVPSSSVVPHNDPTLLFTNAGMNQFKPVFLGTIGKSEPFAQLKRAADTQKCIRAGGKH 229

Query: 136  NDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDE 195
            NDLDDVGKD+YHHTFFEMLGNWSFGDYFK EAIEW+WELLTKVY L   RLY TYF G+ 
Sbjct: 230  NDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIEWSWELLTKVYGLDPSRLYVTYFEGNP 289

Query: 196  KAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAAS 254
            + GL PD EA+ +WL   +P   +LP   KDNFWEMGD GPCGPCSEIHYD+ G R+AA 
Sbjct: 290  ELGLEPDLEAKQLWLDVGVPEDHILPGNMKDNFWEMGDQGPCGPCSEIHYDKVGGRNAAH 349

Query: 255  LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDV 314
            LVN DDP  +EIWN VF+QF+R+ D SLKPLPA+H+DTG+GFERL S LQ+K SNY TD+
Sbjct: 350  LVNKDDPLVVEIWNNVFMQFDRQKDKSLKPLPARHIDTGMGFERLVSALQDKTSNYATDI 409

Query: 315  FMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREY 374
            F P+FD IQ+ TGARPY+ K G DDAD +D AYRVVADHIR L+FAIADG+ P N GR Y
Sbjct: 410  FTPLFDRIQEVTGARPYADKYGKDDADGIDTAYRVVADHIRMLAFAIADGAVPNNIGRGY 469

Query: 375  VLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEAS 433
            V+RR+LRR VRY  +  KA+ G FF+ ++  +V+ MG+ FPELK+++  I+EI+  EE +
Sbjct: 470  VVRRVLRRGVRYARKYFKAEIGSFFSSILPALVEQMGEQFPELKKKQNDIKEILDEEEVA 529

Query: 434  FGKTLLKGIEKFKK----AAQDVQGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDI 489
            F  TL +G ++F+K    A +D   K LSG D + L+DT+GFP DLT+LMAEERGL +D 
Sbjct: 530  FAVTLDRGEKQFEKYASLAVKDGSNK-LSGADVWRLYDTFGFPEDLTKLMAEERGLTIDE 588

Query: 490  EGFNNAMDEARERSRSAQNKQAGGAIV-MDADATAALHKR-GVLATDDSFKFIWFQDHKS 547
                 A ++ARE S++   K+A      ++    A L    G+   D S K++   D K+
Sbjct: 589  AEVEVAREKAREASKAV--KEAVQTFPKLNVHQIAELENDIGLPRPDSSAKYVK-GDIKA 645

Query: 548  VIKAIYTGSEFIES---VVPGNEVGIVLASSSFYAEQGGQIFDEG--FIEGLFGSFYVRN 602
             ++ I+TG+EF ++   + P   +G++L  ++FYAE GGQ+ D G   I+G+   F V +
Sbjct: 646  KVQLIFTGNEFRKTSKELPPKTPLGLLLDKTNFYAESGGQVADTGRIIIDGV-AEFKVLD 704

Query: 603  VQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDH 662
            VQ YGG+++H G L    G  + G+EVIC+ D  RR+ I  NHT TH+LN ALREVLGD 
Sbjct: 705  VQEYGGYIVHNGYLE--YGELTAGDEVICEYDELRRQPIRNNHTGTHILNHALREVLGDE 762

Query: 663  VDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCING 722
            V QKGS+V  +KLRFDFSH   V  + ++ IE + NE I+  L  ++K+  L  A+ I G
Sbjct: 763  VHQKGSLVDQDKLRFDFSHKSAVTLDQIKVIEEMCNEDIRKNLKTYAKDVDLDLARQIEG 822

Query: 723  LRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLS 782
            +RAVFGE YP+PVRVV+IG  V++LL +P+N EW   S E CGGTH+ NT   + F ++ 
Sbjct: 823  VRAVFGETYPNPVRVVSIGMDVDELLKNPKNPEWRKYSIEFCGGTHVDNTGLIKDFIIVE 882

Query: 783  EEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEG------------------- 823
            E GIAKGIRRI A T   A++A   A +  +++D    +E                    
Sbjct: 883  ESGIAKGIRRIVACTGDGAHQAQRDAKTFAEKLDHIEALEFGPVKQAEIKAAAVELDALA 942

Query: 824  -SLLEKNQVR----KAQKKVAEEN--LQKA-VKVATETAEAAAS-----NGKPFCISRVE 870
             S L K ++R    + QK+V +E    QKA  K A ET ++  S     N K F +  + 
Sbjct: 943  ISALTKEELRQRFARIQKEVVDEQKKRQKAESKTALETVQSHFSKEENKNAK-FFVGHLP 1001

Query: 871  VGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAA 930
            +  +A A+ + V+   + K     V+    + + AV+       +  SK +   +W  A 
Sbjct: 1002 ISANAKAISD-VITHFKSKDKEKTVYVFAGSKDDAVMHGVYVGTALSSKGITAEQWTAAV 1060

Query: 931  LQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKLR 972
             + + G+ G GK     G G D +++  A+  A ++   K++
Sbjct: 1061 TEVIGGKTG-GKEPSRQGAGADPSKLDEAVARAEQWLVDKIK 1101


>gi|260784931|ref|XP_002587517.1| hypothetical protein BRAFLDRAFT_237056 [Branchiostoma floridae]
 gi|229272665|gb|EEN43528.1| hypothetical protein BRAFLDRAFT_237056 [Branchiostoma floridae]
          Length = 751

 Score =  793 bits (2049), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 393/749 (52%), Positives = 509/749 (67%), Gaps = 29/749 (3%)

Query: 62  KVRDTFFKFFEDKN-HVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLT 120
           +VRD F K+FE+K+ H+   SS  +P++DPTLLFANAGMNQ+KPIF GT DP+  ++K  
Sbjct: 10  QVRDMFIKYFEEKHEHLEVHSSSTIPLDDPTLLFANAGMNQFKPIFQGTVDPSHPMAKYR 69

Query: 121 RACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYR 180
           R  N+QKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFGDYFK EA  WAW+LL   Y+
Sbjct: 70  RVVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKEACSWAWDLLVNGYK 129

Query: 181 LPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGPC 239
           L  +R+Y TYFGG+E  GL PD E R IWL   +   R+LP   KDNFWEMG+ GPCGPC
Sbjct: 130 LEVERMYVTYFGGNEAQGLQPDLECRQIWLDLGVAEDRILPGSMKDNFWEMGEVGPCGPC 189

Query: 240 SEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERL 299
           SEIHYDR G RDA+ LVN D P  +EIWN+VF+Q NRE DGS+  LP K++D G+G ER+
Sbjct: 190 SEIHYDRVGGRDASHLVNMDVPEVLEIWNLVFMQNNREPDGSITNLPKKNIDCGMGLERI 249

Query: 300 TSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSF 359
            S++Q  +SNYDTD+F P FDAIQ+ATG RPY+GKVGADDAD +DMAYRV+ADH RTL+ 
Sbjct: 250 LSVVQGVLSNYDTDLFTPFFDAIQKATGVRPYTGKVGADDADGIDMAYRVLADHARTLTI 309

Query: 360 AIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQR 419
           +++DG  P N GR YVLRRILRR VRY +E L A  GFF  LV++ V+ +G  FPE+ + 
Sbjct: 310 SMSDGGKPDNVGRGYVLRRILRRGVRYATEKLNAPRGFFASLVDVAVQTLGSAFPEITKD 369

Query: 420 EAHIREIIAAEEASFGKTLLKGIEKF-KKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQL 478
              +++II  EE  F KTL +G     K+  Q    KV+ G+ A++L+DTYGFP+DLT L
Sbjct: 370 PQMVKDIINEEEEQFLKTLSRGRRVLEKRITQLGDSKVVPGETAWLLYDTYGFPVDLTSL 429

Query: 479 MAEERGLLVDIEGFNNAMDEARERSRSAQNKQAG--GAIVMDADATAALHKRGVLATDDS 536
           MAEE+GL +D   +     +A+ RS   Q K AG   ++ +D  A   L ++G   TDDS
Sbjct: 430 MAEEKGLTLDCAAYEECKKQAQIRS---QGKGAGVDDSVNLDVHAINELQEKGSPPTDDS 486

Query: 537 FKFIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFD 587
            K+ +         FQ   + + ++    +F++ V  G E G++L  ++FYAEQGGQI+D
Sbjct: 487 PKYQYSHDDNGNYVFQPCTATVVSLRRDKQFVQEVTQGQECGVLLDRTNFYAEQGGQIYD 546

Query: 588 EGFI--------EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRK 639
           EG++              F V+N Q+ GG+V+HIG+L    G  +VG++V   VD  RR+
Sbjct: 547 EGYLVKEEDEVKRTAETEFTVKNCQVRGGYVMHIGTL---VGTLNVGDKVKLFVDEARRR 603

Query: 640 LIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNE 699
            I  NHT TH+LNFALR+VLG+  DQ+GS+V P++LRFDFS    +    ++  E I NE
Sbjct: 604 PIMSNHTSTHVLNFALRQVLGE-ADQRGSLVAPDRLRFDFSAKGAMTTAQIKEAEKICNE 662

Query: 700 QIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSI 759
            IK    V++KEA LA+AK I GLRAVF E YPDPVRV++IG  VED+L+DP +      
Sbjct: 663 IIKKNEQVYAKEAALAQAKAIQGLRAVFDETYPDPVRVLSIGISVEDMLSDPTSPAGTVT 722

Query: 760 SAELCGGTHLSNTREAEAFALLSEEGIAK 788
           S E CGGTHL     A    +++EE IAK
Sbjct: 723 SVEFCGGTHLQRVGHAGDLVIVTEEAIAK 751


>gi|451853657|gb|EMD66950.1| hypothetical protein COCSADRAFT_83417 [Cochliobolus sativus ND90Pr]
          Length = 966

 Score =  793 bits (2047), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 421/782 (53%), Positives = 535/782 (68%), Gaps = 25/782 (3%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           EW A +VR TF  +F+++ H    SS VVP++DPTLLF NAGMNQYK IF GT DP++  
Sbjct: 9   EWGAVRVRQTFLDYFKERGHTFVPSSSVVPLSDPTLLFTNAGMNQYKAIFQGTIDPSSDF 68

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
           ++L RA N+QKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK EAI + WELLT
Sbjct: 69  AQLKRAANSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIGFTWELLT 128

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
           KVY +   RLY TYF G ++  L PD EA+++WLK  +P   +LP   KDNFWEMGD GP
Sbjct: 129 KVYGIDPKRLYVTYFEGTDE--LEPDIEAKELWLKAGVPEDHILPGDMKDNFWEMGDQGP 186

Query: 236 CGPCSEIHYD----RTGN-RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHV 290
           CGPCSE+HYD      G  R+AASLVN DDP  IEIWN VF+Q+NRE D SL+ LP KH+
Sbjct: 187 CGPCSEVHYDLREPENGQYRNAASLVNMDDPEVIEIWNNVFMQYNREPDRSLRSLPNKHI 246

Query: 291 DTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVV 350
           DTG+G+ERL S+LQ+K SNYDTDVF P+F  IQ  TGAR Y GK G +D D +D AYRVV
Sbjct: 247 DTGMGYERLVSVLQHKKSNYDTDVFTPLFQKIQSITGAREYRGKFGDEDPDGIDTAYRVV 306

Query: 351 ADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVM 409
           ADH+R +SFAIADG  P N GR YV+RR+LRR  RY  +    + G FF+ +V  +V  M
Sbjct: 307 ADHVRMMSFAIADGGVPNNVGRGYVVRRVLRRGARYARKYFACEIGDFFSKIVPTLVDQM 366

Query: 410 GDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK---VLSGQDAFILW 466
           GD+FPE+++++  I EI+  EE +F K+L +G   F+K AQ  + K    L G D + L+
Sbjct: 367 GDMFPEIRKKQQDIIEILDEEEKAFAKSLDRGETIFEKYAQKAKTKGSDELPGDDVWRLY 426

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIV-MDADATAAL 525
           DTYGFP+DLT+LMAEERGL ++ E    A ++ARE S+   +K+A G +V  D     AL
Sbjct: 427 DTYGFPVDLTKLMAEERGLKINDEEVEVAQEKAREASKG--DKKAAGLLVKFDVHDLGAL 484

Query: 526 HKRG-VLATDDSFKFIWFQDHKSVIKAIYTGSEFIESV--VP-GNEVGIVLASSSFYAEQ 581
                V  TDDS K+   ++  +VIKAIY   +F++S   VP G + G++L  ++FYAEQ
Sbjct: 485 ENMPEVPKTDDSPKY-GRENITAVIKAIYHNKKFLKSTAEVPKGEQFGVLLDRTNFYAEQ 543

Query: 582 GGQIFDEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRK 639
           GGQ FD G   ++G      + NVQ+Y G+V+H G +    G  SVG EVI + D  RR 
Sbjct: 544 GGQEFDTGKLLVDGE-AEISIENVQVYAGYVLHTGYIK--YGELSVGSEVIAEFDELRRH 600

Query: 640 LIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNE 699
            I  NHT TH+LN+ALREVLG+ VDQKGS+V PEKLRFDFSH   +    L ++E I + 
Sbjct: 601 PIRNNHTGTHVLNYALREVLGNEVDQKGSLVAPEKLRFDFSHKAGLSDAELDKVERISSA 660

Query: 700 QIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSI 759
            IK +  V++K+  LA AK I G+RAVFGE YPDPVRVV++G  VEDLL D +N++W  +
Sbjct: 661 YIKEDKQVYAKDVPLASAKEIRGVRAVFGETYPDPVRVVSVGVPVEDLLKDVKNEKWEKL 720

Query: 760 SAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDAS 819
           S E CGGTH+  T E +   +L E GIAKGIRRI AVT   AY     A   ++ V+   
Sbjct: 721 SIEFCGGTHVLKTGEIKDLVILEESGIAKGIRRIVAVTGQEAYNVQRVAGEFQERVEAMG 780

Query: 820 KI 821
           K+
Sbjct: 781 KM 782


>gi|66475244|ref|XP_627438.1| alanyl-tRNA synthetase (with HxxxH domain) [Cryptosporidium parvum
           Iowa II]
 gi|46229265|gb|EAK90114.1| alanyl-tRNA synthetase (with HxxxH domain) [Cryptosporidium parvum
           Iowa II]
          Length = 1003

 Score =  793 bits (2047), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 442/979 (45%), Positives = 604/979 (61%), Gaps = 76/979 (7%)

Query: 58  WPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLS 117
           W   +VR  F K+FE  +H  ++SSPV+P+NDPT+LF NAGMNQ+K IFLGT +PN++LS
Sbjct: 21  WTGDEVRRQFVKYFEGLDHTFYRSSPVIPLNDPTILFINAGMNQFKSIFLGTVEPNSELS 80

Query: 118 KLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTK 177
           KL R  N+QKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK EAIEWA++LLT+
Sbjct: 81  KLVRVANSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKEEAIEWAFKLLTQ 140

Query: 178 VYRLPADRLYATYFGGDEK-AGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPC 236
           VY +P DRLYATYFGGD K     PD EA+ IWLK+LP  R+L  G K+NFWEM DTGPC
Sbjct: 141 VYGIPKDRLYATYFGGDPKLPSCPPDEEAKRIWLKYLPEDRILSCGSKENFWEMADTGPC 200

Query: 237 GPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGF 296
           GPCSEIHYDR G RDA SLVN DDP  IEIWN+VF+Q+ RE D +L PLP K VDTG+G 
Sbjct: 201 GPCSEIHYDRIGGRDAISLVNKDDPDVIEIWNLVFMQYYREVDSTLTPLPKKCVDTGMGL 260

Query: 297 ERLTSILQNKMSNYDTDVFMPIFDAIQQATGAR-----PYSGKVG-ADDADKVDMAYRVV 350
           ERL SILQNK SNYD D+F PIFD I Q   +       YSGKVG  DD + +DM+YRV+
Sbjct: 261 ERLVSILQNKTSNYDIDLFKPIFDQIHQVISSSGVQIPRYSGKVGDIDDPEMIDMSYRVI 320

Query: 351 ADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG---FFNGLVNIVVK 407
           +DHIRTL+ AIADG  P NEGR YVLRRILRRA+RYGS+ LKA      +F  LV+ V  
Sbjct: 321 SDHIRTLTIAIADGCIPSNEGRGYVLRRILRRAIRYGSQYLKAGSNGEPWFYKLVDSVSN 380

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKA----------AQDVQGKVL 457
           +MG+ + E+ +    I+E+I  EE  F KTL KG E+F K            QD   K+ 
Sbjct: 381 IMGNYYKEIPENIQIIKEVILDEEKQFSKTLFKGTERFNKVINKLKSSQNNQQDQNKKLF 440

Query: 458 SGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVM 517
              +AF L+ TYGFP+DLT+LMA E+G   D +GF   M+     S    NK     I+ 
Sbjct: 441 PASEAFQLYSTYGFPMDLTELMANEQGFDFDRQGFQLCMENHHLASEGKNNKSFDDLILK 500

Query: 518 DADATAALHKRGVLATDDSFKF---IWFQDHKSVIKAIYTGSEFIESV-VPGNEVGIVLA 573
                  L + G+  TDD +K+      +D  S + AI+ G++ + +  + G  +G++  
Sbjct: 501 PDIQNNLLLEFGLKETDDQYKYQSQTQIKDFYSNLIAIFDGNQLLNATEIQGKVIGLIFD 560

Query: 574 SSSFYAEQGGQIFDEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGE 627
            ++FY+E GGQ+ D GFI+  + +      F V + + +G +V+HIG L +G    S   
Sbjct: 561 KTTFYSESGGQVADTGFIDFQYNNNDEVSIFQVIDCKKFGNYVLHIGILLQGKIEISPEL 620

Query: 628 EVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDP 687
           + +  VDY RR LI  NHT TH+LNFALR++LG   DQ+GSVV P KLRFDFS  KP+  
Sbjct: 621 KSLMSVDYSRRNLIKKNHTGTHILNFALRQILGSTCDQRGSVVDPNKLRFDFSSQKPLTL 680

Query: 688 EHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDL 747
           + +  IE ++N+ I+ +  V+ +   L+ AK I  +RA+FGE YPDPVRV+++ + V+ L
Sbjct: 681 DQIEEIEKMINQIIQEKQTVYCQTVELSIAKQIPNIRAIFGETYPDPVRVLSVSKSVDSL 740

Query: 748 L-ADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFE 806
           + +  +N +   +S E CGGTH+ NT E  +F+++SEEGIAKGIRRI AVT   +  A E
Sbjct: 741 INSQTDNNDQEKVSIEFCGGTHVENTSEIISFSIISEEGIAKGIRRIVAVTDNQSEIAIE 800

Query: 807 AACSLEKEVDDASKIEGSLLE------KNQV----------RKAQKKVAEENLQK----- 845
            A  L++E     ++ G  LE      K+++          R+   ++ EEN ++     
Sbjct: 801 NAKRLKQEFKKLEELNGKELETLLNSFKSKLDETKLLPLLYRRQLSQIIEENYKRVIADA 860

Query: 846 --------------AVKVATETAEAAASNGK-PFCISRVEVGLDAAAVREAVLKVIEQK- 889
                         A K+  E ++  +SN + P  I  ++     +   + + + I +K 
Sbjct: 861 KKKQKERLNMAKELATKIGQEYSQQLSSNNEFPALILNIKQIQGDSKSMDVIGQDISKKY 920

Query: 890 -GMPVMVFSTDETTNKAV-VCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCG----KGKG 943
              P+M+F++ E  +  V V + +P+    S +L  S WL + ++   G+CG    +  G
Sbjct: 921 PEAPIMLFTSGEFNDNGVSVISIMPKSK--SDKLSSSNWLKSTIELCNGKCGGTDLRSVG 978

Query: 944 GLASGQGTDAAQVTPAMDL 962
              +G  +  + +  A+DL
Sbjct: 979 SSKTGSESIESMIQLALDL 997


>gi|339254482|ref|XP_003372464.1| putative alanine--tRNA ligase [Trichinella spiralis]
 gi|316967113|gb|EFV51596.1| putative alanine--tRNA ligase [Trichinella spiralis]
          Length = 962

 Score =  792 bits (2046), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 397/767 (51%), Positives = 513/767 (66%), Gaps = 28/767 (3%)

Query: 60  ATKVRDTFFKFF-EDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSK 118
           A  +R TF  +F E +NH    SS V+P  DP+LLF NAGMNQ+KPIFLGTADPN+Q++ 
Sbjct: 7   ANAIRQTFINYFTEKRNHQYVHSSSVIPKGDPSLLFTNAGMNQFKPIFLGTADPNSQMAS 66

Query: 119 LTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKV 178
             R  N+QKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFGDYFK +   WAWE+LTK 
Sbjct: 67  WKRVVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKDICAWAWEVLTKE 126

Query: 179 YRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCG 237
           +++P ++LY TYFGG EK  L PD E R IWL   LP+ RVLPFG KDNFWEMGD GPCG
Sbjct: 127 FKIPKEQLYVTYFGGSEKCRLQPDVECRQIWLDMGLPSERVLPFGMKDNFWEMGDIGPCG 186

Query: 238 PCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFE 297
           PCSEIHYDR GNR+AA+L+N DDP  +EIWN+VFI +NR+ DGSL PLP +H+D GLGFE
Sbjct: 187 PCSEIHYDRIGNRNAANLINKDDPDVLEIWNLVFITYNRDKDGSLHPLPKRHIDCGLGFE 246

Query: 298 RLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTL 357
           RL S++Q K SNYDTD+F+PIF+ I +    RPY GKVG +D  ++DMAYRVVADHIRTL
Sbjct: 247 RLVSVIQGKKSNYDTDLFVPIFNRIAETAKVRPYMGKVGEEDEQQIDMAYRVVADHIRTL 306

Query: 358 SFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVM---GDVFP 414
           + A++DG  P N GR YVLRRILRR VRY +E L A  GFF  LV +VV+ +   G+ FP
Sbjct: 307 TVALSDGGRPDNCGRGYVLRRILRRGVRYATEKLNAPSGFFANLVPVVVETLVEDGETFP 366

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGI----EKFKKAAQDVQGKVLSGQDAFILWDTYG 470
           ELK+    + EII  EE+ F KTL +G     ++ +KA++D   K++ G  A+ L+ +YG
Sbjct: 367 ELKEDPNSVMEIINEEESLFLKTLSRGSRVLRQEIEKASKD---KLIPGVVAWRLYASYG 423

Query: 471 FPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGV 530
           FP+DLTQLMAEE G  V++E +     +A + S S++  Q    +  + +A   L    V
Sbjct: 424 FPVDLTQLMAEESGYKVNMEEYEECRQQA-QMSSSSKFSQLNDVVDFNINAVNYLLNGKV 482

Query: 531 LATDDSFKFIW-----------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYA 579
             TDD  K+ +           F + K  + A+    EF+  V  G+   ++   ++FYA
Sbjct: 483 PLTDDKPKYAYRLTENGDDDYEFDEVKCEVLALRKNGEFVSEVCSGDSCCLICDKTAFYA 542

Query: 580 EQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRK 639
           E GGQI+DEG +EG    F VRNVQ  GG+++H G   E  G  + G ++   VD  RR 
Sbjct: 543 ESGGQIYDEGSMEGDKSEFRVRNVQARGGYIVHFG---EVMGTITRGSKLFQNVDQKRRV 599

Query: 640 LIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNE 699
            +  NHT TH+LNFALREVLG  V+QKGS+VL ++LRFDF+   P+  E L +IE IV  
Sbjct: 600 QVMKNHTATHLLNFALREVLG-QVEQKGSLVLTDRLRFDFTCKAPLTVEQLMKIEQIVAN 658

Query: 700 QIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSI 759
            + ++++++ +E  L  AK I GLR+   E YPDPVRVV++G  V+ LL DP+       
Sbjct: 659 IVNSDVEIYMQEVPLGVAKTIAGLRSTADETYPDPVRVVSVGTPVDALLKDPDGPGAKLA 718

Query: 760 SAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFE 806
           S E CGGTHL  T     F + SEE +A+GIRRI A+T   A +A +
Sbjct: 719 SVEFCGGTHLLRTGHLGDFVIASEEAVARGIRRIVALTCHEAEQAVQ 765


>gi|327304957|ref|XP_003237170.1| alanyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326460168|gb|EGD85621.1| alanyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 934

 Score =  791 bits (2043), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 459/965 (47%), Positives = 604/965 (62%), Gaps = 78/965 (8%)

Query: 42  ASAVAAMPGADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQ 101
           A++ ++ P A  Q VEWPA +VRDTF  +FE   H                         
Sbjct: 2   AASTSSQPPAGQQTVEWPALRVRDTFLDYFEKNGHT------------------------ 37

Query: 102 YKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGD 161
                 GT DPN+  ++L RA N+QKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGD
Sbjct: 38  -----FGTVDPNSDFAQLKRAHNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGD 92

Query: 162 YFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLP 220
           YFK EAI+++WELLTKVY L  DRLY TYF G+E AG+ PD EARDIW    +    +L 
Sbjct: 93  YFKKEAIQFSWELLTKVYGLDPDRLYVTYFEGNEAAGVGPDIEARDIWRSVGVKDDHILT 152

Query: 221 FGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDG 280
              KDNFWEMGD GPCGPCSEIHYDR G R+AA LVN DDP  +EIWN VFIQ+NRE D 
Sbjct: 153 GDMKDNFWEMGDQGPCGPCSEIHYDRIGGRNAAHLVNQDDPDVLEIWNNVFIQYNREPDR 212

Query: 281 SLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDA 340
           SL+PLP +HVDTGLG+ERL SILQNK SNYDTDVF P+F AIQ  TGARPY+GK GA+DA
Sbjct: 213 SLRPLPNQHVDTGLGYERLVSILQNKSSNYDTDVFTPLFTAIQNITGARPYTGKFGAEDA 272

Query: 341 DKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFN 399
           D +D AYRVVADH+RTL+FAI DG+ P NEGR YV+RR+LRR VRY  + L+ + G FF+
Sbjct: 273 DGIDTAYRVVADHLRTLTFAITDGAAPNNEGRGYVVRRVLRRGVRYARKYLQVEIGSFFS 332

Query: 400 GLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQ---DVQGKV 456
            LV  +V+ MGD+FPE+++++  + EI+  EE SF KTL +G  +F+  AQ   D     
Sbjct: 333 KLVPALVEQMGDMFPEIRRKQTDVMEILDEEEVSFAKTLDRGERQFENYAQQALDSGAGK 392

Query: 457 LSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIV 516
           L G D + L+DT+GFP+DLT+LMAEER L +D   F  A  +A+E S+  Q K A   + 
Sbjct: 393 LHGADVWRLYDTFGFPVDLTRLMAEERQLTIDDAEFEEARLKAKEASK-GQAKTASDLLK 451

Query: 517 MDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESV--VPGNE-VGIVLA 573
           +     + L K GV  TDD  KF    +  + IKAI  G E I+S   +P NE +GI+L 
Sbjct: 452 LTVHTLSTLEKNGVPKTDDDAKF-GKGNIVANIKAICHGKEVIDSTKDIPANEQIGIILD 510

Query: 574 SSSFYAEQGGQIFDEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVIC 631
            ++FYAEQGGQ +D G   I+G      V+NVQ+YGG+V+H G +    G FSV + VI 
Sbjct: 511 KTNFYAEQGGQEYDTGKIVIDGQ-AELDVQNVQMYGGYVLHTGFIK--YGNFSVNDSVIA 567

Query: 632 KVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLR 691
           + D  RR  I  NHT TH+LNFALREVLGD VDQKGS+V  EKLRFDFSH   +    L 
Sbjct: 568 EYDELRRWPIRNNHTGTHILNFALREVLGDGVDQKGSLVAAEKLRFDFSHKSAISDSDLE 627

Query: 692 RIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADP 751
           +IE+   + I+    V+S+E  LA A+ I G+RAVFGE YPDPVRVV++G +++++L + 
Sbjct: 628 KIEAKSTDYIRQNCAVYSQEVPLATAREITGVRAVFGETYPDPVRVVSVGVELDEILKNV 687

Query: 752 ENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAA--- 808
           ++  W  +S E CGGTH+  T + +   +L E GIAKGIRRI AVT   A++    A   
Sbjct: 688 KDPRWEGVSIEFCGGTHVQKTGDIKDLVILEESGIAKGIRRIIAVTGEDAHEVQRIAREF 747

Query: 809 -----------CSLEKEVD------DASKIEGSLLEK----NQVRKAQKKV--AEENLQK 845
                       S E++ +      D +++  S +EK    NQ  +  KK+  A++  QK
Sbjct: 748 GERLNRFEKMPASPERDAEIKSLQVDLNQLTISAVEKTKYRNQFTQIHKKITDAQKAAQK 807

Query: 846 A-VKVATETAEA--AASNGKPFCISRVEVGLDAAAVREAVLKV-IEQKGMPVMVFSTDET 901
           A VK A +   A    +   P  + ++ +  +  A+ E++  V  +  G  + VF+ D  
Sbjct: 808 AEVKTAIDAISAYFEENTESPSLVIKLPITANQKAISESLNHVKTKLSGKALYVFAAD-A 866

Query: 902 TNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMD 961
           +  A  C   P+ +  +K    +EW +A    + G+ G GK  +A G GT+  +V  A+D
Sbjct: 867 SKVAHGCYVTPDLT--TKGASANEWASAVSSIVGGKAG-GKAPVAIGNGTEVNKVDEALD 923

Query: 962 LAAEF 966
            A ++
Sbjct: 924 EATKY 928


>gi|67594831|ref|XP_665905.1| cytosolic tRNA-Ala synthetase [Cryptosporidium hominis TU502]
 gi|54656773|gb|EAL35675.1| cytosolic tRNA-Ala synthetase [Cryptosporidium hominis]
          Length = 989

 Score =  790 bits (2041), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 443/980 (45%), Positives = 604/980 (61%), Gaps = 74/980 (7%)

Query: 58  WPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLS 117
           W   +VR  F K+FE  +H  ++SSPV+P+NDPT+LF NAGMNQ+K IFLGT +PN++LS
Sbjct: 9   WTGDEVRRQFVKYFEGLDHTFYRSSPVIPLNDPTILFINAGMNQFKSIFLGTVEPNSELS 68

Query: 118 KLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTK 177
           KL R  N+QKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK EAIEWA++LLT+
Sbjct: 69  KLVRVANSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKEEAIEWAFKLLTQ 128

Query: 178 VYRLPADRLYATYFGGDEK-AGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPC 236
           VY +P DRLYATYFGGD K     PD EA+ IWLK+LP  R+L  G K+NFWEM DTGPC
Sbjct: 129 VYGIPKDRLYATYFGGDPKLPSCPPDEEAKKIWLKYLPEDRILSCGSKENFWEMADTGPC 188

Query: 237 GPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGF 296
           GPCSEIHYDR G RDA+SLVN DDP  IEIWN+VF+Q+ RE D +L PLP K VDTG+G 
Sbjct: 189 GPCSEIHYDRIGGRDASSLVNKDDPDVIEIWNLVFMQYYREVDSTLTPLPKKCVDTGMGL 248

Query: 297 ERLTSILQNKMSNYDTDVFMPIFDAIQQATGAR-----PYSGKVG-ADDADKVDMAYRVV 350
           ERL SILQNK SNYD D+F PIFD I Q   +       YSGKVG  DD + +DM+YRV+
Sbjct: 249 ERLVSILQNKTSNYDIDLFKPIFDQIYQVISSSGVQIPRYSGKVGDIDDPEMIDMSYRVI 308

Query: 351 ADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG---FFNGLVNIVVK 407
           +DHIRTL+ AIADG  P NEGR YVLRRILRRA+RYGS+ LKA      +F  LV+ V  
Sbjct: 309 SDHIRTLTIAIADGCIPSNEGRGYVLRRILRRAIRYGSQYLKAGSNGEPWFYKLVDSVSN 368

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKA----------AQDVQGKVL 457
           +MG+ + E+ +    I+E+I  EE  F KTL KG E+F K            QD   K+ 
Sbjct: 369 IMGNYYKEIPENIQIIKEVILDEEKQFSKTLFKGTERFNKVINKLKSSQNNQQDQNKKLF 428

Query: 458 SGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVM 517
              +AF L+ TYGFP+DLT+LMA E+G   D +GF   M+     S    NK     I+ 
Sbjct: 429 PASEAFQLYSTYGFPMDLTELMANEQGFDFDRQGFQLCMENHHLASEGKNNKSFDDLILK 488

Query: 518 DADATAALHKRGVLATDDSFKF-IWFQDHKSVIKAIYTGSEFIESV-VPGNEVGIVLASS 575
                  + + G+  TDD +K+    +D  S + AI+ G++ I++  + G  +G++   +
Sbjct: 489 PDIQNNLIVEFGLKETDDQYKYQTQIKDFYSNLIAIFDGNQLIDATEIQGKVIGLIFDKT 548

Query: 576 SFYAEQGGQIFDEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEV 629
           +FY+E GGQ+ D GFI+  + +      F V + + +G +V+HIG L +G    S   + 
Sbjct: 549 TFYSESGGQVADTGFIDFQYNNNDETSKFQVIDCKKFGNYVLHIGILLQGKIEISPELKS 608

Query: 630 ICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEH 689
           +  VDY RR LI  NHT TH+LNFALR++LG   DQ+GSVV P +LRFDFS  KP+  + 
Sbjct: 609 LMSVDYSRRNLIKKNHTGTHILNFALRQILGSTCDQRGSVVDPNRLRFDFSSQKPLTLDQ 668

Query: 690 LRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLL- 748
           +  IE +V++ I+ +  V+ +   L+ AK I  +RA+FGE YPDPVRV+++ + V+ L+ 
Sbjct: 669 IEEIEKMVSQIIQEKQTVYCQTVELSIAKQIPNIRAIFGETYPDPVRVLSVSKSVDSLIN 728

Query: 749 ADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAA 808
           +  +N +   +S E CGGTH+ NT E  +F+++SEEGIAKGIRRI AVT   +  A E A
Sbjct: 729 SQTDNNDQEKVSIEFCGGTHVENTSEIISFSIISEEGIAKGIRRIVAVTDNQSEIAIENA 788

Query: 809 CSLEKEVDDASKIEGSLLE--------------------------------KNQVRKAQK 836
             L++E     ++ G  LE                                K  +  A+K
Sbjct: 789 KRLKQEFKKLEELNGKELETLLNSFKSKLDETKLLPLLYRRQLSQIIEEHYKRVIADAKK 848

Query: 837 KVAEE-NLQK--AVKVATETAEAAASNGK-PFCISRVEVGLDAAAVREAVLKVIEQK--G 890
           K  E  N+ K  A K+  E ++  +SN + P  I  ++     +   + + + I +K   
Sbjct: 849 KQKERLNMAKELATKIGQEYSQQLSSNNEFPALILNIKQIQGDSKSMDVIGQDISKKYPE 908

Query: 891 MPVMVFSTDETTNKAV-VCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCG----KGKGGL 945
            P+M+F++ E  +  V V + +P+    S +L  S WL + ++   G+CG    +  G  
Sbjct: 909 APIMLFTSGEFNDNGVSVISIMPKSK--SDKLSSSNWLKSTIELCNGKCGGTDLRSVGSS 966

Query: 946 ASGQGTDAAQVTPAMDLAAE 965
            +G  +  + +  A+DL  +
Sbjct: 967 KTGSESIESMIQLALDLLKQ 986


>gi|302923886|ref|XP_003053770.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256734711|gb|EEU48057.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 956

 Score =  790 bits (2039), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 449/956 (46%), Positives = 607/956 (63%), Gaps = 45/956 (4%)

Query: 56  VEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQ 115
           ++WPA +VR TF ++FE + H    SS VVP NDPTLLF NAGMNQ+KPIFLGT      
Sbjct: 6   LKWPAARVRQTFLEYFEQRGHTIVPSSSVVPHNDPTLLFTNAGMNQFKPIFLGTIGKTDP 65

Query: 116 LSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELL 175
           ++ L  A ++QKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK EA++++WELL
Sbjct: 66  MAGLKAAVDSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAVQYSWELL 125

Query: 176 TKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTG 234
           TKVY L   RLY TYF GDEK  L PD EA+D+WL   +P   +LP   KDNFWEMGD G
Sbjct: 126 TKVYGLDPARLYVTYFEGDEKLKLEPDLEAKDLWLSVGVPEDHILPGNMKDNFWEMGDQG 185

Query: 235 PCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           PCGPCSEIHYD+ G R+AA+LVN DDP  +EIWN VF+Q++R+ DGSLK LPAKH+DTG+
Sbjct: 186 PCGPCSEIHYDKIGGRNAANLVNMDDPMVVEIWNNVFMQYDRQKDGSLKSLPAKHIDTGM 245

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           G+ERL S LQN +SNY TD F P+F  I++ TGARPYS K G DDAD +D AYRVVADHI
Sbjct: 246 GYERLVSALQNTVSNYATDCFTPLFKKIEEVTGARPYSDKYGKDDADGIDTAYRVVADHI 305

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVF 413
           RTLSF+IADG+ P N+GR YV+RR+LRR VRY  +   A  G FF+ ++  +V  MG+ F
Sbjct: 306 RTLSFSIADGAVPNNDGRGYVVRRVLRRGVRYARKYFNADIGAFFSKILPALVDQMGEQF 365

Query: 414 PELKQREAHIREIIAAEEASFGKTLLKGIEKFKK-AAQDVQ--GKVLSGQDAFILWDTYG 470
           PEL +++  I+EI+  EE +F +TL +G  +F+K AAQ V+   K L G   + L+DT+G
Sbjct: 366 PELVKKQQDIKEILDEEEVAFARTLDRGEAQFEKYAAQAVKDGSKKLEGDVVWRLYDTFG 425

Query: 471 FPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR-G 529
           FP+DLT+LMAEER L +D      A  +ARE S++ +      +  ++    A L ++  
Sbjct: 426 FPVDLTRLMAEERSLEIDDAEVEAARIKAREASKAVKESVQTFS-KLNVHQIAELEQQLK 484

Query: 530 VLATDDSFKFIWFQDHKSVIKAIYTGSEFIESV--VP-GNEVGIVLASSSFYAEQGGQIF 586
           V  T+D  KF+   D K  ++ IY G  F++S   +P    +G++L +++FYAE GGQ+ 
Sbjct: 485 VERTNDDAKFLQ-GDSKGKVQLIYDGKTFLKSTKDIPEKTALGLLLDNTNFYAESGGQVA 543

Query: 587 DEG-FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
           D G  +      F V +VQ +GG+++H G +  GA   + G+EVIC+ D  RR  I  NH
Sbjct: 544 DTGRIVIDDVAEFNVLDVQNFGGYILHSGYIEYGA--LNSGDEVICEYDELRRSPIRNNH 601

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           T TH+LN +LREVLGD + QKGS+V  EKLRFDFSH   V  E L++IE   NE I+   
Sbjct: 602 TGTHILNHSLREVLGDEIHQKGSLVDNEKLRFDFSHKTGVKIEELKKIEDRSNEYIRRGS 661

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            +FSK+  L  A+ I G RAVFGE YP+PVRVV+IG+ ++++LADP+N EW   S E CG
Sbjct: 662 PIFSKDVDLDLARQIEGCRAVFGETYPNPVRVVSIGKDIDEMLADPKNVEWRQYSVEFCG 721

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVD--------- 816
           GTH+  T   +   L+ E GIAKGIRRI A T   A++    A    K++D         
Sbjct: 722 GTHVEQTGLIKDLILIEESGIAKGIRRIIAYTGEAAHQVQREAAEFAKKLDALEKLDFAE 781

Query: 817 ----------DASKIEGSLLEKNQVRKAQKKVA------EENLQKA-VKVATETA--EAA 857
                     + S++  S L K+++ K  +K++      ++  QKA  K A +T      
Sbjct: 782 KESQVKAVSVELSQLTISTLTKDELNKRFQKISTAVVAEQKKRQKAEAKTALDTVLKHFK 841

Query: 858 ASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQ 917
           A+    + + R+ +G +A AV E V+K  + K     V+    +  +  V  GV   +  
Sbjct: 842 ANEDAKWFVGRLPIGANAKAVGE-VVKHFQGKDKEKSVYLFGGSKEEGAVVHGVYVGTHL 900

Query: 918 SKQ-LEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKLR 972
           S Q +   +W  +  + + GR G GK     GQGT    +   ++ A ++ + KL+
Sbjct: 901 SSQGVTAEQWAASVSEVIGGRSG-GKEPTRQGQGTKPENLDDGVETATKWLSEKLK 955


>gi|342181320|emb|CCC90799.1| putative alanyl-tRNA synthetase [Trypanosoma congolense IL3000]
          Length = 1004

 Score =  787 bits (2033), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 429/993 (43%), Positives = 587/993 (59%), Gaps = 72/993 (7%)

Query: 38  SRFSASAVAAMPGADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANA 97
           S+   + +  + G    + EWP ++VR  F  FFE + H    S  V+P +DPTLLF NA
Sbjct: 19  SKVRRTLLLPLIGISRTMNEWPISRVRQEFVDFFERRGHTFVPSGAVIPHDDPTLLFTNA 78

Query: 98  GMNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNW 157
           GMNQ+K +FLGTADPNT   +LTRA N+Q CIRAGGKHNDLDDVG+DTYHHTFFEMLG+W
Sbjct: 79  GMNQFKNLFLGTADPNTDFGRLTRAVNSQMCIRAGGKHNDLDDVGRDTYHHTFFEMLGSW 138

Query: 158 SFGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASR 217
           SFG YFK EAI W+WELLT+VY+LP DRLY TYF GD   G+APD E++ +WL+ +P   
Sbjct: 139 SFGSYFKREAILWSWELLTEVYKLPKDRLYVTYFEGDPVTGIAPDEESKRLWLELVPEDH 198

Query: 218 VLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRE 277
           V+P   KDNFWEMGD GPCGPCSEIH+DR GNR+AA LVN DDP  IE+WN+VF+QF R 
Sbjct: 199 VIPGNAKDNFWEMGDVGPCGPCSEIHFDRIGNRNAAELVNKDDPMVIEVWNLVFMQFERR 258

Query: 278 SDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGA 337
             G + PLP  HVDTG+G ERL SILQ   SNYDTD +MP+FDAIQ+ TG      ++  
Sbjct: 259 EGGVMVPLPKMHVDTGMGLERLASILQGVHSNYDTDAWMPLFDAIQKVTGFDKSYAEI-R 317

Query: 338 DDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGF 397
           D      +AYR VADHIR L+ A+ADG+ P   GR +VLRRI+RRAVRYG + L A+ GF
Sbjct: 318 DTCCDATVAYRAVADHIRCLTVALADGAMPDCVGRGFVLRRIIRRAVRYGVQFLGAKTGF 377

Query: 398 FNGLVNIVVKVMGDVFPELKQREA--HIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK 455
           F+ LV+ VV  +GD F  L++      I+ ++A EEASF +T   G++ F KA  +  G 
Sbjct: 378 FHKLVDSVVASLGDFFKHLQEPRTVQRIKGVLADEEASFARTWETGLKHFNKAVAEAVGN 437

Query: 456 VLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAI 515
           ++SG++AF+L D YGFP+DLT L+AE+  + VD++GF+  M    + S+ +  + A    
Sbjct: 438 IISGENAFVLHDRYGFPVDLTSLLAEKANMKVDLDGFHATM----KASQLSSGRVAAAKT 493

Query: 516 VMDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIY--TGSEFIESVVP-----GNEV 568
            +D      L   G+  TDD+ K++W +   + +KAI+      F+E ++P       ++
Sbjct: 494 FLDVHQVEQLKAMGIAPTDDASKYVW-KSRVAEVKAIFDRRSGAFVEMLLPDPDVNSEDI 552

Query: 569 GIVLASSSFYAEQGGQIFDEGFIEGLFGSFY-VRNVQIYGGFVIHIGSLTEGAGR----- 622
           GI+L +++FYAE GGQI+D G I     + + V+ V   GG+++H+GS+    G      
Sbjct: 553 GIILDATNFYAEAGGQIYDTGRIFAAPDAIFDVQKVYNIGGYIVHVGSMRAPCGNEGDVG 612

Query: 623 ----FSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGD-------HVDQKGSVVL 671
                 V   V  +VDYDRR  IA NHT TH+LN+ LR VL +        V QKGS+V 
Sbjct: 613 VPVPIPVTAAVELQVDYDRRLPIAANHTSTHLLNWCLRRVLEEEAPNNFVEVHQKGSLVN 672

Query: 672 PEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVY 731
            E LRFDFS+   V    L ++E I NE ++ E++V+ KE TL  A+ I GLR +FGE Y
Sbjct: 673 AEMLRFDFSYNSKVGHSDLIKVEKIFNELVQKEMNVYRKEVTLDTARRIVGLRQMFGEKY 732

Query: 732 PDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIR 791
           PDPV V++IG  VE L+ DPEN++W + S E CGGTHLSNTR+ +   +LSE+ + KGIR
Sbjct: 733 PDPVSVISIGVPVEQLIEDPENEQWRAYSTEFCGGTHLSNTRDVQMGVILSEDSLMKGIR 792

Query: 792 RITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKNQVRKAQKKVAE----------- 840
           RI   T   A +A +   +L++E  +      S +    +    KKV +           
Sbjct: 793 RIVFATRDAASRAQKEGNALQQEYHEIISRPPSDMVSKSLSVLNKKVGDSAIPLLLKNKL 852

Query: 841 -ENLQKAVKVATETAEAAASNGK-------------------PFCISRVE-VGLDAAAVR 879
            E++  ++K    + +A A+  K                   P  +  +   G D  A++
Sbjct: 853 REDIDGSIKQVLASLKAQAAQLKESAAAAGRSAAEVHDTEAVPLLVRHLTCTGADREALQ 912

Query: 880 EAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCG 939
                  +     V +F       KA+    +P  +  SK+L+   W  AA+       G
Sbjct: 913 AYADGFCKAASGNVALFLVGSDGEKALALVTMP-PAFVSKKLDAVSWAKAAI-------G 964

Query: 940 KGKGGLASGQGTDAAQVTPAMDLAAEFAAMKLR 972
           KG G   + Q   AA     +   AE  A K+R
Sbjct: 965 KGGGKPQAAQSGFAAVDLDKVLEKAEAEAAKMR 997


>gi|444722321|gb|ELW63019.1| Alanyl-tRNA synthetase, cytoplasmic [Tupaia chinensis]
          Length = 1050

 Score =  786 bits (2031), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 408/795 (51%), Positives = 521/795 (65%), Gaps = 37/795 (4%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A+ +R  F  FF+   H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  ++KL
Sbjct: 7   ASDIRSRFIDFFKRNEHTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A + A ELLT+ +
Sbjct: 67  SRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTEEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +P +RLY TYFGGDE AGL PD E + IW    L  S++LP   KDNFWEMGDTGPCGP
Sbjct: 127 GIPVERLYVTYFGGDEAAGLEPDLECKQIWQNLGLDDSKILPGNMKDNFWEMGDTGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIH+DR G RDAA LVN DDP  +EIWN+VFIQ+NRE+DG LKPLP K +DTG+G ER
Sbjct: 187 CSEIHFDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNRETDGILKPLPKKSIDTGMGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+F+P F+AIQ+ TGARPYSGKVGADD D +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYSGKVGADDTDGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
             +A G      G EYVLRRILRRAVRY  E L A  GFF  LV++VV+ +GD FPELK+
Sbjct: 307 GPMAAG-LTTRGGGEYVLRRILRRAVRYSHEKLNASRGFFATLVDVVVQSLGDAFPELKK 365

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
               +++II  EE  F KTL +G     +  Q +   K + G  A++L+DTYGFP+DLT 
Sbjct: 366 DPDMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTG 425

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
           L+AEE+GL+VD++GF      A+ +S   Q K AGG   I++D  A   L  +G+ ATDD
Sbjct: 426 LIAEEKGLVVDMDGFEEERKLAQLKS---QGKGAGGEDLIMLDIYAIEELRAKGLEATDD 482

Query: 536 SFKFIWFQDHK---------SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           S K+ +  D           + + A+     F+  V  G E G+VL  + FYAEQGGQ +
Sbjct: 483 SPKYNYLSDSSGNYVFESTVATVLALRREKMFVAEVFTGQECGVVLDRTCFYAEQGGQTY 542

Query: 587 DEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           DEG++     S      F V+NVQ+ GG+V+H+G++    G   VG++V   +D  RR+ 
Sbjct: 543 DEGYLVKADDSSEDKTEFTVKNVQVRGGYVLHVGTIY---GHLKVGDQVRLFIDEPRRRP 599

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           +  NHT TH+LNFALR VLG+  DQKGS+V P++LRFDF+    +  + +++ E I NE 
Sbjct: 600 VMSNHTATHILNFALRCVLGE-ADQKGSLVAPDRLRFDFTAKGAMSTQQIKKAEEIANEM 658

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I+A   V++++  LA AK I GLRAVF E YPDPVRVV+IG  V +LL DP        S
Sbjct: 659 IEAAKPVYTQDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTS 718

Query: 761 AELCGGT-------HLSNTREAEAFALLSEEGIAKGIRRITAV---TTGLAYKAFEAACS 810
            E CGGT       H+  T     +        AK I+ + AV   T     +       
Sbjct: 719 VEFCGGTMVELLRIHMERTWFPPVYTQDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVP 778

Query: 811 LEKEVDDASKIEGSL 825
           + + +DD S   GSL
Sbjct: 779 VSELLDDPSGPAGSL 793



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 106/307 (34%), Positives = 150/307 (48%), Gaps = 45/307 (14%)

Query: 707  VFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGG 766
            V++++  LA AK I GLRAVF E YPDPVRVV+IG  V +LL DP        S E CGG
Sbjct: 742  VYTQDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTSVEFCGG 801

Query: 767  THLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEK------------- 813
            THL N+  A AF +++EE IAKGIRRI AVT   A KA   A SL+K             
Sbjct: 802  THLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKAESLKKSLSAMEAKVKAQT 861

Query: 814  --------EVDDASKIEGSLL----EKNQVR---KAQKKVAEENLQKAVK------VATE 852
                    E+ D  +   + +    +K+++R   K+ KKV  ++L +A K      V   
Sbjct: 862  APNKDVQREIADLGEALATAVIPQWQKDELREMLKSLKKVM-DDLDRASKADVQKRVLER 920

Query: 853  TAEAAASN-GKPFCISRVEVGLDA------AAVREAV-LKVIEQKGMPVMVFSTDETTNK 904
            T +   SN  +P  I  +E G  A      +A+ EA+ L          M+F+ D    K
Sbjct: 921  TKQLIDSNPNQPLVILEMENGASAKAGPAPSALNEALKLFKTHSPQTSAMLFTVDNEAGK 980

Query: 905  AVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAA 964
                  VP+ +  ++ L+ SEW+      + G+ G GK   A   G +   +  A+ LA 
Sbjct: 981  ITCLCQVPQNA-ANRGLKASEWVQQVSGLMDGK-GGGKDVSAQATGKNVGCLQEALQLAT 1038

Query: 965  EFAAMKL 971
             FA ++L
Sbjct: 1039 SFAQLRL 1045


>gi|347830916|emb|CCD46613.1| similar to alanyl-tRNA synthetase [Botryotinia fuckeliana]
          Length = 961

 Score =  786 bits (2031), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 450/962 (46%), Positives = 604/962 (62%), Gaps = 52/962 (5%)

Query: 55  VVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNT 114
             +W A  VR  F  FFE   H    SS VVP NDPTLLF NAGMNQ+KPIFLGT     
Sbjct: 7   TTKWTAPVVRKQFLSFFEKNAHSVVPSSSVVPHNDPTLLFTNAGMNQFKPIFLGTVGKTD 66

Query: 115 QLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWEL 174
            +++L RA +TQKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK +AI  AWEL
Sbjct: 67  DMAQLKRAVDTQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKADAIGMAWEL 126

Query: 175 LTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDT 233
           LTKVY L +DRLY TYF GD +  +  D EA+++WLK  +    +L    KDNFWEMG+T
Sbjct: 127 LTKVYGLDSDRLYVTYFEGDAENNVPADTEAKNLWLKAGVKEDHILTGNMKDNFWEMGET 186

Query: 234 GPCGPCSEIHYDRT-GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDT 292
           GPCGPCSEIHYDR  G R+AA LVN DDP  +EIWNIVFIQF+R+ D SLK LPAKH+DT
Sbjct: 187 GPCGPCSEIHYDRIGGGRNAAHLVNQDDPNVLEIWNIVFIQFDRQKDRSLKTLPAKHIDT 246

Query: 293 GLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVAD 352
           G+G+ERL S+LQ+K SNYDTDVF P+F  IQ+ T ARPY+ K G DD D +D AYRVVAD
Sbjct: 247 GMGYERLVSVLQDKSSNYDTDVFSPLFAKIQEVTNARPYTDKYGKDDTDGIDTAYRVVAD 306

Query: 353 HIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGD 411
           HIR L+FAI+DG  P NEGR YV+RR+LRR  RY  +   A+ G FF+ ++  +V+ MG+
Sbjct: 307 HIRLLTFAISDGGVPNNEGRGYVVRRVLRRGSRYARKYFNAEIGSFFSKILPALVEQMGE 366

Query: 412 VFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKK-AAQDVQ--GKVLSGQDAFILWDT 468
            FPE+ +++  ++EI+  EE +F +TL +G + F+K AAQ ++   K LSG D + L+DT
Sbjct: 367 QFPEIVKKQQDVKEILDEEEEAFARTLDRGEKMFEKYAAQAIKTNTKKLSGADVWRLYDT 426

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIV-MDADATAALHK 527
           +GFP DLT++MAEERGL  D      A ++ARE S+S   K+A      +D    A L  
Sbjct: 427 FGFPEDLTKIMAEERGLETDEGEIEIAKEKAREASKSV--KEAAHTFAKLDVHQIAELDN 484

Query: 528 RGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESV--VPGNE-VGIVLASSSFYAEQGGQ 584
            G+   +D  KF    D    I+ IY G  F++S   +P ++  GI+L  ++FYAEQGGQ
Sbjct: 485 MGIPRPNDDAKFSK-GDSTGKIQLIYDGKNFLKSTADLPNDKPFGILLDKTNFYAEQGGQ 543

Query: 585 IFDEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIA 642
           +FD G   I+G+   F V + Q YGG+++H G +    G F  G+EVIC+ D  RR+ I 
Sbjct: 544 VFDTGKIIIDGV-AEFKVLDTQAYGGYIVHNGYMD--YGDFKAGDEVICEYDELRRQPIR 600

Query: 643 PNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIK 702
            NHT TH+LN ALRE LG+ ++QKGS+V  EKLRFDFSH   V    L+++E   N  IK
Sbjct: 601 NNHTGTHILNHALREHLGEDINQKGSLVDQEKLRFDFSHKAQVTLPELKKVEDSANSYIK 660

Query: 703 AELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAE 762
               ++SK+  L  AK I G+RAVFGE YP+PVRVV++G +V+ LLA+P+N EW  +S E
Sbjct: 661 QNCKIYSKDVDLDIAKGIEGVRAVFGETYPNPVRVVSVGVEVDVLLAEPKNPEWRKVSVE 720

Query: 763 LCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV------- 815
            CGGTH+  T   +   ++ E GIAKGIRRI A T   A++    A    K +       
Sbjct: 721 FCGGTHVDQTGIIKDLVIVEESGIAKGIRRIIAYTGDAAHEVQRIAMEFGKRIAALDAMP 780

Query: 816 -------------DDASKIEGSLLEKNQVR----KAQKKVAEENLQKA---VKVATETAE 855
                        +D + +  S+L K  ++    K QK V +E  +K     K A +T  
Sbjct: 781 HGVEKEQEVKSTQNDLNHLTISVLAKEDLKKKFTKVQKDVLDEQKKKQKAESKTALDTVT 840

Query: 856 AAASNGK----PFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGV 911
           A  ++ K       I+++ +  ++ A+ + V+   + K     V+    + ++  V  GV
Sbjct: 841 AYFADSKNKDSTAYIAQLPISANSKAIAD-VMNHFKSKAKDKTVYLFGGSASEGAVVHGV 899

Query: 912 PEKSD-QSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMK 970
              +D  SK +   +W  A  + + GR G GK    +GQGT+  ++  A+ +A ++ A K
Sbjct: 900 YVGTDAASKGVSAEQWAAAVSEVVGGRSG-GKEPTRTGQGTNPDKIEDAVAVAEKWFAEK 958

Query: 971 LR 972
           L+
Sbjct: 959 LK 960


>gi|440635965|gb|ELR05884.1| alanyl-tRNA synthetase [Geomyces destructans 20631-21]
          Length = 1016

 Score =  786 bits (2031), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 458/1027 (44%), Positives = 614/1027 (59%), Gaps = 77/1027 (7%)

Query: 2    TGLLRKTETASFVATARVLLNPSLTLAVT------NHHHSLIS---RFSASAVAAMPGAD 52
            T  L ++     V + R+L  P  T  +T        H  LI+   RFS +       A 
Sbjct: 10   TSFLTRSPIFCTVESTRIL--PRYTQRLTAPRSSRRSHIQLIAGGRRFSGNM------AS 61

Query: 53   PQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADP 112
                EWPA  VR TF ++F D+ H    S+ VVP ND TLLFANAGMNQ+KPIFLGT   
Sbjct: 62   ETAQEWPAPLVRKTFLEYFADRQHEIVSSASVVPHNDATLLFANAGMNQFKPIFLGTVGA 121

Query: 113  NTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAW 172
                + + RA +TQKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK E IE++W
Sbjct: 122  TEAFASMKRAVDTQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKETIEFSW 181

Query: 173  ELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMG 231
            ELLTKV++L  DRLY TYF GD+  GL  D EA+++W+   +    +LP   KDNFWEMG
Sbjct: 182  ELLTKVFKLDPDRLYVTYFEGDKDLGLEADLEAKELWMAVGVSEDHILPGDIKDNFWEMG 241

Query: 232  DTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVD 291
            +TGPCGPCSEIH+DR G R+AASLVN DDP  +EIWN VF+QF+R+ D SLK LPA+H+D
Sbjct: 242  ETGPCGPCSEIHFDRIGGRNAASLVNQDDPNVLEIWNNVFMQFDRQKDRSLKVLPARHID 301

Query: 292  TGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVA 351
            TG+GFERL SILQ+K SNY TDVF P+F  IQ+ T ARPY+ K G DDAD +D AYRV+A
Sbjct: 302  TGMGFERLVSILQDKTSNYATDVFTPLFAKIQEVTQARPYTDKYGKDDADGIDTAYRVIA 361

Query: 352  DHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMG 410
            DH+R L+FAI+DG+ P NEGR YV+RR+LRR  RY  +   A  G FF+ ++  +V+ MG
Sbjct: 362  DHVRLLTFAISDGAVPNNEGRGYVVRRVLRRGSRYARKYFNADIGNFFSRILPALVEQMG 421

Query: 411  DVFPELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWD 467
            + FPE+ + ++ + EI+  EEA F +TL  G    E+F   A       L+G + + L+D
Sbjct: 422  EQFPEIVRMQSEVAEILDEEEAQFARTLDNGEKMFERFATRAIKSGTNRLTGDEVWRLYD 481

Query: 468  TYGFPLDLTQLMAEERGLLVDIEGFNNAMDE-ARERSRSAQNKQAGGAIV---MDADATA 523
            TYGFP DLT++MA+ER +     G+N+   E AR ++R A      G I    +D    A
Sbjct: 482  TYGFPEDLTKIMADERNI-----GYNDEEIEIARLKAREASKSTKEGVIAFAKLDVHQIA 536

Query: 524  ALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIES---VVPGNEVGIVLASSSFYAE 580
             L+K  +  T D  K+         +K IY G +F++S   +V G   G++L  ++FYAE
Sbjct: 537  ELNKSEIPPTIDDAKYTG-NVTTGKVKFIYDGKDFLKSTKELVAGQNFGLMLDRTNFYAE 595

Query: 581  QGGQIFDEGFIEGLFG--SFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRR 638
             GGQ+ D G I G+ G   F V +VQ YGG+++H G L +  G+ S  +EV  + D  RR
Sbjct: 596  SGGQVADVGRI-GIDGGAEFKVVDVQAYGGYILHNGFLEQ--GQLSADDEVTLEYDEIRR 652

Query: 639  KLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVN 698
            + I  NHT TH+LN +LREVLGD V QKGS+V  EKLRFDFS+   +    L++IE   N
Sbjct: 653  QPIRNNHTGTHILNHSLREVLGDEVHQKGSLVDAEKLRFDFSNKVQLTLPELQKIEDFSN 712

Query: 699  EQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLS 758
              I+    ++SK+  L EA+ I GLRAVFGE YP+PVRVV++G  V+ LLADP+N+EW  
Sbjct: 713  SYIRQNCKIYSKDVQLEEAQGIVGLRAVFGETYPNPVRVVSVGVDVDTLLADPKNEEWRK 772

Query: 759  ISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVD-- 816
            +S E CGGTH+  T E +   ++ E GIAKGIRRI A T   A +   AA    + +D  
Sbjct: 773  VSVEFCGGTHVDQTGEIKDLIIVEESGIAKGIRRIIAYTGQAARQVQLAAKDFSQRLDAL 832

Query: 817  ------------------DASKIEGSLLEKNQVR----KAQKKVAEENLQKAVKVATETA 854
                              D + +  S L K Q+R    K  KKV +E  +K  K  + TA
Sbjct: 833  EALPYGPEKEREIKAISSDLNGLRISTLTKEQLRDRFSKESKKVVDEQ-KKRQKAESSTA 891

Query: 855  EAAA--------SNGKPFCISRVEVGLDAAAVREAVLKV-IEQKGMPVMVFSTDETTNKA 905
              A         +  K F ++R+ +  ++ A+ + +     E K   V VF+  E     
Sbjct: 892  TDAVKAYFNDPENKDKSFYVARLPISANSKAISDVINYCKKEAKDKTVYVFAGGE--EHG 949

Query: 906  VVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAE 965
             V  GV   +  +  +   +W  A +  L G+ G GK     GQG    ++  A++ A +
Sbjct: 950  AVIHGVYVGTAHATDVLAEDWSGAVVDILGGKSG-GKQPTRQGQGEKPEKIDEAVNTATK 1008

Query: 966  FAAMKLR 972
            +   KL+
Sbjct: 1009 WLESKLK 1015


>gi|361125346|gb|EHK97392.1| putative Alanyl-tRNA synthetase [Glarea lozoyensis 74030]
          Length = 971

 Score =  786 bits (2030), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 443/956 (46%), Positives = 589/956 (61%), Gaps = 50/956 (5%)

Query: 51  ADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTA 110
           +DPQ  +W A  VR TF  FFE K H    SS VVP +DPTLLF NAGMNQ+KPIFLGT 
Sbjct: 2   SDPQ--KWTAPVVRKTFLDFFEKKGHTVVPSSSVVPHSDPTLLFTNAGMNQFKPIFLGTV 59

Query: 111 DPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEW 170
                +++  RA ++QKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFGDYFK  AI  
Sbjct: 60  GKTDDMAQWKRAVDSQKCIRAGGKHNDLDDVGKDGYHHTFFEMLGNWSFGDYFKEGAIGM 119

Query: 171 AWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWE 229
           +WELLTKVY +  DRLY TYF GDE +GL PD EA+++W K  +    +LP   KDNFWE
Sbjct: 120 SWELLTKVYGIDPDRLYVTYFEGDEASGLEPDLEAKELWKKVGVAEDHILPGNMKDNFWE 179

Query: 230 MGDTGPCGPCSEIHYDRT-GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           MG+TGPCGPCSE+HYDR  G R+AA LVN DDP  +EIWN VFIQ++R+ D SLK LPAK
Sbjct: 180 MGETGPCGPCSEVHYDRIGGGRNAAHLVNMDDPNVLEIWNNVFIQYDRQKDRSLKTLPAK 239

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
           H+DTGLG+ERL S+LQ+K+SNYDTDVF P+F  I++ TGAR Y+ K G DD D +D AYR
Sbjct: 240 HIDTGLGYERLVSVLQDKLSNYDTDVFSPLFAKIKEVTGARDYTDKYGKDDVDGIDTAYR 299

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVK 407
           V+ADHIR L+FAI+DG  P NEGR YV+RR+LRR  RY  +   A+ G FF+ ++  +V+
Sbjct: 300 VIADHIRLLTFAISDGGVPNNEGRGYVVRRVLRRGSRYARKYFNAEIGAFFSKILPALVE 359

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFI 464
            MG+ FPE+ +++  ++EI+  EE +F +TL +G    EK+  +A     K LSG D + 
Sbjct: 360 QMGEQFPEIVKKQDDVKEILDEEEEAFARTLDRGEKMFEKYAASAIKSNTKKLSGADVWR 419

Query: 465 LWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIV-MDADATA 523
           L+DT+GFP DLT++MAEERGL  D      A ++ARE S+    K+A      +D    A
Sbjct: 420 LYDTFGFPEDLTKIMAEERGLETDDAEIKIAQEKAREASKHV--KEAAHTFAKLDVHQIA 477

Query: 524 ALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESV--VPGNEV-GIVLASSSFYAE 580
            L K  V   DD  KF    D    ++ IY G  F+++   +P  +  GI+L  ++FYAE
Sbjct: 478 ELDKLNVPRPDDEAKFSK-GDTTGKVQLIYDGENFLKTTEGLPAQKTFGILLDKTNFYAE 536

Query: 581 QGGQIFDEG-FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRK 639
           QGGQ++D G  I      F V +VQ YGG+++H G L    G+   G+EVIC+ D  RR+
Sbjct: 537 QGGQVYDTGKMIIDDVAEFKVLDVQAYGGYIVHNGYLE--YGQLKAGDEVICEYDELRRQ 594

Query: 640 LIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNE 699
            I  NHT TH+LN ALRE LGD ++QKGS+V  +KLRFDFSH   V    L++IE   N 
Sbjct: 595 PIRNNHTGTHILNHALREHLGDDINQKGSLVDQDKLRFDFSHKTQVSNAELKKIEDSSNS 654

Query: 700 QIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSI 759
            IK    V+ ++  L  AK I G+RAVFGE YP+PVRVV++G +VE LLA+P N EW  +
Sbjct: 655 YIKQNCRVYYQDVDLETAKGIEGVRAVFGETYPNPVRVVSVGVEVEVLLAEPRNPEWRKV 714

Query: 760 SAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---- 815
           S E CGGTH+  T   +   ++ E GIAKGIRRI A T   A++    A    K++    
Sbjct: 715 SVEFCGGTHVEQTGLIKDLVIVEESGIAKGIRRIIAYTGDAAHEVQRLAIEFGKKISTLE 774

Query: 816 ----------------DDASKIEGSLLEKNQVR----KAQKKVAEENLQK-----AVKVA 850
                            D + +  S L K +++    K QK V +E  +K        + 
Sbjct: 775 QLPYGPEKEQQVKAMQQDLNNLTVSTLTKEELKTHFTKVQKSVLDEQKKKQKAESKTALD 834

Query: 851 TETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAG 910
           T TA  A +      + ++ +  +  A+ + VL   + K     V+    +T ++ V  G
Sbjct: 835 TVTAYFAENKDSNIYVGQLPISANPKAIND-VLNHYKTKSKDKTVYLFGGSTAESTVVHG 893

Query: 911 VPEKSDQ-SKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAE 965
           V   ++  SK +    W  +  + + G+ G GK    +GQGT    +  A+DLA +
Sbjct: 894 VYVGTEHASKGVTAESWAASVSEVVGGKSG-GKEPTRTGQGTKPESIGDAVDLATK 948


>gi|313221903|emb|CBY38956.1| unnamed protein product [Oikopleura dioica]
          Length = 934

 Score =  786 bits (2030), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 445/961 (46%), Positives = 596/961 (62%), Gaps = 82/961 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A +VR  F  FF+++ H    SS  +P +DPTLLFANAGMNQ+K IF+GT DP++ ++KL
Sbjct: 7   ANEVRQQFLDFFKEREHPYVHSSSTIPHDDPTLLFANAGMNQFKSIFVGTIDPSSPMAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
             A N+QKCIRAGGKHNDLDDVGKD+YHHTFFEMLG+WSFGDYFK EAI+W+++LL KV+
Sbjct: 67  KSAVNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGSWSFGDYFKKEAIQWSFDLLNKVW 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
            +PADRLYATYF G+ + GL PDNEAR+ WLK+LPA ++LP   KDNFWEMGDTGPCGPC
Sbjct: 127 GIPADRLYATYFEGNPEEGLEPDNEAREEWLKYLPADQILPGNAKDNFWEMGDTGPCGPC 186

Query: 240 SEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERL 299
           SE+HYDR G R+A+SLVN DDP  +EIWN+VF+Q++R++D SL  LPAK VDTG+G ER+
Sbjct: 187 SELHYDRIGGRNASSLVNMDDPDVLEIWNLVFMQYDRQADKSLISLPAKSVDTGMGLERV 246

Query: 300 TSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSF 359
            S+LQ+K +NYDTD+F P F  I+  TG R Y+G  GA+D D VDMAYRV+ADH RTLS 
Sbjct: 247 VSVLQDKRANYDTDMFSPYFKKIEDLTGTRAYTGLFGAEDKDGVDMAYRVLADHARTLSI 306

Query: 360 AIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQR 419
           A+ADG  P N GR YVLRRILRRA+RYG E LK +   F  LV++VV+ +GD FPELK+ 
Sbjct: 307 ALADGGRPDNVGRGYVLRRILRRAIRYGHEKLKMKVDDFVALVDVVVESLGDAFPELKKD 366

Query: 420 EAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ-GKVLSGQDAFILWDTYGFPLDLTQL 478
               +EI+  E   F KTL +G +  ++  + +     L G  A++L+DTYGFPLDLT L
Sbjct: 367 PESTKEILKEEWIQFMKTLDRGQKILERKIKQLNLTDRLPGDVAWLLYDTYGFPLDLTTL 426

Query: 479 MAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSFK 538
           +AEE  L +  E F     +A ERS+ A                      GV  TDDS K
Sbjct: 427 IAEEHNLTLSCEEFEEERQKAIERSKGAD---------------------GVATTDDSHK 465

Query: 539 FIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEG 589
             +         F   K+ + A+    EF +      EVGIVL  ++FYAEQGGQI+D G
Sbjct: 466 QNYEANSAGEYTFNSIKAKVVALRFNKEFHQEC-ESCEVGIVLDKTNFYAEQGGQIYDLG 524

Query: 590 FIEGLFG---SFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
           +          F V+NVQ+  G+V+H+G+L    G+ SVG+E+   +D +RR  I PNHT
Sbjct: 525 YFSRENDDDFEFNVKNVQVRAGYVLHVGTLV---GKLSVGDEINLNIDTERRVNIMPNHT 581

Query: 647 CTHMLNFALREVLGD-HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
            TH+LNF LR VLG+   DQKGS+V PE+LRFDF+ G  + P  ++++E I NE I    
Sbjct: 582 GTHVLNFGLRCVLGEGEADQKGSLVAPERLRFDFTAGGALKPAQIKQVEEICNEVITRGG 641

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            V  + + LA++K I GLRA+F E YPDPVRVV+IG  V +LL +P +      S E CG
Sbjct: 642 AVHCQVSPLAQSKAIQGLRAMFDETYPDPVRVVSIGVPVNELLENPTSGAADKTSVEFCG 701

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDD-ASKIEGS 824
           GTHL +   A    + +EE I+KGIRR+ AVT   A KA   A  LEK+V++  ++++ +
Sbjct: 702 GTHLRDISHARKLIITAEEAISKGIRRMIAVTGAEAEKADRQAQRLEKDVNELKAEVKEA 761

Query: 825 LLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEV------------- 871
           +  KN     Q+ ++   L K ++VA  +A   A        S++E+             
Sbjct: 762 IKAKNTAEANQRAIS---LGKTIEVAPISAWKRAELVDAVKKSKMEIVQYEQKVEEYEIQ 818

Query: 872 ---GLDAAAVREA----------------VLKVIEQKG--MPVMVFSTDETTNKAVVCAG 910
               +DA  V E                 +LK+  +K     V++FS D T  K +  A 
Sbjct: 819 TEKRIDAGDVAEPEVLLLDAGSNNKVLNEILKLYAKKSPKSHVLLFSADHTAKKVLCLAQ 878

Query: 911 VPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMK 970
            P+ S     L+ +EW+++    + GR G GK   A   G + +++  A+  A EFAA  
Sbjct: 879 TPKGS----TLKANEWVSSISPLIDGRGG-GKDVQAQASGKNVSELKGALAKAKEFAAAN 933

Query: 971 L 971
           L
Sbjct: 934 L 934


>gi|367007058|ref|XP_003688259.1| hypothetical protein TPHA_0N00450 [Tetrapisispora phaffii CBS 4417]
 gi|357526567|emb|CCE65825.1| hypothetical protein TPHA_0N00450 [Tetrapisispora phaffii CBS 4417]
          Length = 957

 Score =  785 bits (2026), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/785 (50%), Positives = 522/785 (66%), Gaps = 13/785 (1%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           +W A  VR+TFF +F+  +H    SS V+P +D +LLF NAGMNQYKPIFLG  DP+++ 
Sbjct: 10  KWSAANVRETFFNYFKSLDHRYVASSSVIPFDDRSLLFTNAGMNQYKPIFLGNVDPHSKF 69

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
             L  A N+QKCIRAGGKHNDL+DVGKD+YHHTFFEMLGNWSFGDYFK EAI ++W LLT
Sbjct: 70  YSLKSAYNSQKCIRAGGKHNDLEDVGKDSYHHTFFEMLGNWSFGDYFKKEAIAYSWTLLT 129

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
           KVY +P DRLY TYF GD K  L PD E RD+WL   +  S ++P   KDNFWEMG+ GP
Sbjct: 130 KVYMIPVDRLYVTYFEGDPKLNLEPDLETRDLWLSVGVLESHIIPGATKDNFWEMGEQGP 189

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPCSEIHYDR G R+AA LVN DDP  +E+WN+VF+QFNRES+G L  LP+KH+DTG+G
Sbjct: 190 CGPCSEIHYDRIGGRNAAHLVNKDDPDVLEVWNLVFMQFNRESNGKLMALPSKHIDTGMG 249

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
           FERL SILQN  SNYDTD+F PIF+ I++ T  R Y+GK G +D + +D AYRV+ADH R
Sbjct: 250 FERLVSILQNVRSNYDTDIFKPIFEKIREITKVREYNGKFGPNDENGIDTAYRVIADHAR 309

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQ-DGFFNGLVNIVVKVMGDVFP 414
           TL  A+ADG  P NEG  YVLRRI RR +RY  + +    + FF+ L   +++   DVFP
Sbjct: 310 TLVVALADGGIPNNEGAGYVLRRIQRRGIRYVHKYMNYPIETFFSQLAPTIIEQFKDVFP 369

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKK---AAQDVQGKVLSGQDAFILWDTYGF 471
           E+ +   HI  I+  EE +F KTL +G + F +    AQ+   ++L+G D + L+DT+GF
Sbjct: 370 EVAKNPEHIYAILNEEEKAFAKTLDRGEKLFTQYALKAQESSDRMLNGTDVWRLYDTFGF 429

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLTQLMA E  L +D  GF  A  ++ E S+  ++ +    + ++    + L+   +L
Sbjct: 430 PLDLTQLMASELQLNIDRTGFEKAKLQSYEASKRRKDNKEADQMKLNIHDISKLNDENIL 489

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEV-GIVLASSSFYAEQGGQIFDEGF 590
            TDDSFK+    D    I  ++ G+ F++ +   + V G++L  + FYAEQGGQI+D G 
Sbjct: 490 KTDDSFKY-GSSDISGNILRLFNGTSFVDKIEKADTVYGVILDKTCFYAEQGGQIYDTGS 548

Query: 591 I--EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
           I  +    SF V+NVQ+Y G+V+H G L EG+    VG++V    +  RR  I  NHT T
Sbjct: 549 ITLDNKNTSFTVQNVQVYNGYVLHSGILNEGS--LEVGDKVTLSYNELRRNAIKANHTAT 606

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+LN+ALR VLG+ V+Q+GS+V  EKLRFDFS+ K +  +++ +IE I N  I+ E DV+
Sbjct: 607 HVLNYALRSVLGNEVEQRGSLVSAEKLRFDFSNRKALSLDNIMKIEEICNGIIQREDDVY 666

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
            K  +L +AK IN +R V GE YPDPVRVV++G+ +E L +D +    L    ELCGGTH
Sbjct: 667 FKNISLEKAKQINSIRTVPGEDYPDPVRVVSVGQAIETLTSDSDGLT-LPNPVELCGGTH 725

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEK 828
           +SNT       L  E  IAKGIRRI+AVT   A  A  +A      ++  SKI+ S  EK
Sbjct: 726 VSNTLFIGKLILTEETSIAKGIRRISAVTGEAAVTAERSAIEFRDTLEYISKIK-SFTEK 784

Query: 829 NQVRK 833
            Q  K
Sbjct: 785 QQKLK 789


>gi|367043852|ref|XP_003652306.1| hypothetical protein THITE_2113640 [Thielavia terrestris NRRL 8126]
 gi|346999568|gb|AEO65970.1| hypothetical protein THITE_2113640 [Thielavia terrestris NRRL 8126]
          Length = 959

 Score =  784 bits (2025), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 450/959 (46%), Positives = 598/959 (62%), Gaps = 49/959 (5%)

Query: 56  VEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQ 115
           V W    VR TF  FF +K H    SS VVP NDPTLLF NAGMNQ+KP+FLGT      
Sbjct: 4   VRWTGPLVRKTFLDFFAEKGHTIVPSSSVVPHNDPTLLFTNAGMNQFKPVFLGTIGKTEP 63

Query: 116 LSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELL 175
           +++L RA +TQKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK EAIEW+WELL
Sbjct: 64  IAQLKRAVDTQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIEWSWELL 123

Query: 176 TKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTG 234
           TKVY L  +RLY TYF G+    L PD EA+ +WL+  +P   +LP   KDNFWEMGD G
Sbjct: 124 TKVYGLDPNRLYVTYFEGNPDLNLEPDLEAKQLWLQVGVPEDHILPGNMKDNFWEMGDQG 183

Query: 235 PCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           PCGPCSEIHYD+ G R+AA LVN DDP  +EIWN VF+QF+R+ D +LKPLPAKH+DTG+
Sbjct: 184 PCGPCSEIHYDKLGGRNAAHLVNQDDPLVVEIWNNVFMQFDRQKDKTLKPLPAKHIDTGM 243

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL S LQ+K+SNY TD+F P+F  IQ+ TGARPYS K G DD D +D AYRV ADHI
Sbjct: 244 GFERLVSALQDKLSNYATDIFTPLFARIQEVTGARPYSDKYGKDDVDGIDTAYRVAADHI 303

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVF 413
           R L+FAIADG+ P N GR YV+RR+LRR VRY  +   A+ G FF+ ++  +V+ MGD F
Sbjct: 304 RLLAFAIADGAAPNNIGRGYVVRRVLRRGVRYARKYFHAEIGSFFSSILPALVEQMGDQF 363

Query: 414 PELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQ---DVQGKVLSGQDAFILWDTYG 470
           PELK+++  I+EI+  EE +F  TL +G ++F+K A          LSG D + L+DT+G
Sbjct: 364 PELKKKQNDIKEILDEEEVAFAVTLDRGEKQFEKYASLAVKAGNNKLSGADVWRLYDTFG 423

Query: 471 FPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAI-VMDADATAALHKRG 529
           FP DLT+LMAEERGL +D      A ++ARE S++   K+A      ++    A L    
Sbjct: 424 FPEDLTKLMAEERGLTIDEAEVEVAREKAREASKAV--KEAVQTFPKLNVHQIAELENTI 481

Query: 530 VLATDDSFKFIWFQDHKSVIKAIYTGSEF---IESVVPGNEVGIVLASSSFYAEQGGQIF 586
            L   DS       D K  ++ I+TG+EF    + + P   +G++L  ++FYAE GGQ+ 
Sbjct: 482 KLPRPDSEAKYQKGDTKGKVQLIFTGNEFRTTSKELPPKTPLGVLLDKTNFYAESGGQVA 541

Query: 587 DEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           D G   I+G+   F V +VQ YGG+++H G L    G  + G+EVIC+ D  RR+ I  N
Sbjct: 542 DTGRILIDGV-AEFKVLDVQEYGGYIVHNGYLE--YGELTAGDEVICEYDELRRQPIRNN 598

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           HT TH+LN ALREVLGD V QKGS+V  +KLRFDFSH   V  E +++IE + NE I+  
Sbjct: 599 HTGTHILNHALREVLGDEVHQKGSLVDQDKLRFDFSHKSQVSLEEIKKIEDMSNEDIRKN 658

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
           L  + K+  L  A+ I G+RAVFGE YP+PVRVV+IG  V++LL +P+N EW  IS E C
Sbjct: 659 LKTYYKDVDLDLARQIEGVRAVFGETYPNPVRVVSIGVDVDELLKNPKNPEWRKISVEFC 718

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVD-------- 816
           GGTH+  T   +   ++ E GIAKGIRRI A T   A++A   A    +++D        
Sbjct: 719 GGTHVDATGIIKDLIIIEESGIAKGIRRIVAYTGDGAHQAQRDAKVFSEKLDHIEALDFG 778

Query: 817 --DASKIEG----------SLLEKNQVR----KAQKKVAEEN--LQKA-VKVATETAEAA 857
              A++I+           S L K ++R    K QK+V +E    QKA  K A +T +  
Sbjct: 779 PQKAAEIKAAAVELDALAISALTKEELRQRFAKIQKEVVDEQKKRQKAESKTALDTVQGH 838

Query: 858 ASNGK----PFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPE 913
            S  +     F +  + +  +A A+ + V+   + K     V+    + + AV+      
Sbjct: 839 FSKEENKDAKFFVGHLPISANAKAIAD-VITYYKSKDKERTVYVFAGSKDDAVMHGVYVG 897

Query: 914 KSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKLR 972
               SK +   +W  A  + + G+ G GK     G G + A++  A+  A ++   K++
Sbjct: 898 THLSSKGITAEQWTAAVTEVIGGKTG-GKEPSRQGAGAEPAKLDEAVAKAEQWLVEKMK 955


>gi|430812199|emb|CCJ30352.1| unnamed protein product [Pneumocystis jirovecii]
          Length = 959

 Score =  784 bits (2025), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 428/961 (44%), Positives = 586/961 (60%), Gaps = 53/961 (5%)

Query: 56  VEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQ 115
           ++WP+ KVR+TF  +F++++H    S+ VVP NDPTLLF NAGMNQYK IFLGT DP + 
Sbjct: 5   LKWPSHKVRETFISYFKERDHTFVPSASVVPYNDPTLLFTNAGMNQYKSIFLGTVDPYSP 64

Query: 116 LSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELL 175
           L KL RA N+QK IRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK EAI ++W+LL
Sbjct: 65  LGKLKRAVNSQKVIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIAYSWDLL 124

Query: 176 TKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTG 234
           T++Y LP + LY TYF GDE+  + PD E RD+W+   +  + +LP   KDNFWEMGD G
Sbjct: 125 TRIYELPKNCLYVTYFQGDEENEILPDLETRDLWIAIGVDQNHILPGSKKDNFWEMGDIG 184

Query: 235 PCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           PCGPC+EIHYDR G R+A +LVN DDP  IEIWN VFIQ+NRE +G L PLP+KHVDTG+
Sbjct: 185 PCGPCTEIHYDRIGGRNATNLVNKDDPDVIEIWNNVFIQYNREKNGKLVPLPSKHVDTGM 244

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL SILQNK SNYDTD+F P+   + + TG RPY GK G +D D +D AYRVV DH+
Sbjct: 245 GFERLVSILQNKSSNYDTDIFYPLLKKVHEITGIRPYQGKFGDEDIDGIDTAYRVVVDHV 304

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVF 413
           RTL F+I DG  P N+GR YVLRRILRR  RY  +      G FF+ L   ++  M   F
Sbjct: 305 RTLMFSICDGCIPNNDGRGYVLRRILRRGARYARKKFNYPIGNFFSSLAPTLINQMVHAF 364

Query: 414 PELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV---QGKVLSGQDAFILWDTYG 470
           PEL ++   I +I+  EEASF KTL +G + F K  Q+      KVL G+D + L++TYG
Sbjct: 365 PEL-EKGYSILDILDMEEASFAKTLDRGEKMFDKYLQNAIVKNTKVLPGKDVWSLYETYG 423

Query: 471 FPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQ--NKQAGGAIVMDADATAALHKR 528
           FP+DL  L+A+E+G+ +D +GF +    ++E SR ++  N ++   I ++A     L   
Sbjct: 424 FPIDLIDLIAKEKGMEIDQKGFKDTEIRSKEISRKSRGNNLESLKTIEINAHDFVKLQTM 483

Query: 529 GVLATDDSFKFIWFQDHKSVIKAIYTGSEFI---ESVVPGNEVGIVLASSSFYAEQGGQI 585
            V  TDDSFK+     + S +KAI+    FI   E++  G ++ I+L  ++FY E+GGQ 
Sbjct: 484 NVSHTDDSFKYNSGTIN-SKVKAIFYNKLFINSTENIKQGEQIIIILDKTNFYGEEGGQE 542

Query: 586 FDEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKV-DYDRRKLIA 642
            D G   +EG    F+V + QI  G+V+HIG +    G F + +E+IC+  D  RRK I 
Sbjct: 543 GDVGKLVLEGK-AEFFVEDTQINAGYVLHIGYMK--YGYFELNDEIICEYEDIGRRKPIK 599

Query: 643 PNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIK 702
            NHT TH+LNF+LR++LGD V QKGS+V  EKLRFDFS+   +    L +IE + N+ I 
Sbjct: 600 NNHTATHLLNFSLRKILGDDVHQKGSLVSSEKLRFDFSYNFRISISDLAKIEDMCNDYIS 659

Query: 703 AELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAE 762
            +  V+SKE  L  A  I G+RA+FGE YPDPVRV+++G  + +++  P   +W   S E
Sbjct: 660 KDFTVYSKEINLDLAYKIFGVRAMFGETYPDPVRVLSVGVDLNEVIKSPTLSKWKDYSIE 719

Query: 763 LCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEA--------ACSLEKE 814
            CGGTH+S T + + F ++ E  I+KGIRRI A+T   A  A  +        AC L+  
Sbjct: 720 FCGGTHVSKTSDIKNFIIVEEGSISKGIRRIVALTGHEANSALRSTHDFSERLAC-LKSM 778

Query: 815 VDDASKIEG-------------SLLEKNQVRKAQKKVAEENL----------QKAVKVAT 851
                KI+              S++EK + R+   ++ +E L          ++ V    
Sbjct: 779 PAGPEKIQRSKLMTAELDCIAISIIEKFKFRETLSQIQKEILELEKNKRKEEERRVVDFI 838

Query: 852 ETAEAAASNGKPFCISRVEVGLDAAAVREAVLKV-IEQKGMPVMVFSTDETTNKAVVCAG 910
           +T  +   N     ++   +  +   +  A+  V   +K   V +F+TD+  +K +    
Sbjct: 839 KTYFSENPNETYLVVNIPNISPNMKVLSNAISYVKTNEKDKSVYLFATDQNQSKNIAHIC 898

Query: 911 VPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMK 970
              KS   K +   EW       L G+ G GK   A G GT+  ++  A+  A  +   +
Sbjct: 899 YVSKSALVK-VNGQEWANTVTTILGGKSG-GKIDSAQGIGTNIEKIDEAVTAAIAYIKKR 956

Query: 971 L 971
           L
Sbjct: 957 L 957


>gi|255727014|ref|XP_002548433.1| alanyl-tRNA synthetase [Candida tropicalis MYA-3404]
 gi|240134357|gb|EER33912.1| alanyl-tRNA synthetase [Candida tropicalis MYA-3404]
          Length = 700

 Score =  783 bits (2022), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/702 (55%), Positives = 494/702 (70%), Gaps = 15/702 (2%)

Query: 35  SLISRFSASAVAAMPGADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLF 94
           +L+ R S + + +    +     W A KVR TF  +F+   H    SS VVP NDPTLLF
Sbjct: 4   TLLRRMSTNTIPST--TNGSTTSWTAAKVRSTFLDYFKQNKHTYVPSSSVVPHNDPTLLF 61

Query: 95  ANAGMNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEML 154
           ANAGMNQYKPIFLGT DP +  + L RA N+QKCIRAGGKHNDL+DVG+D+YHHTFFEML
Sbjct: 62  ANAGMNQYKPIFLGTVDPASDFATLKRAANSQKCIRAGGKHNDLEDVGRDSYHHTFFEML 121

Query: 155 GNWSFGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-L 213
           GNWSFGDYFK EAI+++WELLTKVY LP DRLY TYFGGDEK GL PD EA++ WLK  +
Sbjct: 122 GNWSFGDYFKKEAIDFSWELLTKVYGLPEDRLYVTYFGGDEKQGLEPDLEAKEFWLKVGV 181

Query: 214 PASRVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQ 273
           P   +LP   KDNFWEMGD GPCGPCSEIH+DR G R+A+ LVN DDP  IE+WN+VFIQ
Sbjct: 182 PEDHILPGSVKDNFWEMGDQGPCGPCSEIHFDRIGGRNASDLVNMDDPNVIEVWNVVFIQ 241

Query: 274 FNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSG 333
           FNRE+DG+L+ LP KH+DTG+GFERL SILQ+K SNYDTDVF+PIFD I++ TG RPY+G
Sbjct: 242 FNREADGNLRSLPNKHIDTGMGFERLVSILQDKSSNYDTDVFLPIFDKIREITGVRPYTG 301

Query: 334 KVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKA 393
           K G++D D +D AYRV+ADH+RTL+FAI DG  P NEGR YVLRRILRR  RY  + +  
Sbjct: 302 KFGSEDKDGIDTAYRVIADHVRTLTFAICDGGVPNNEGRGYVLRRILRRGSRYVRKYMNY 361

Query: 394 Q-DGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAA 449
              GFF  LV++V++   ++FPE+      ++EI+  EE SF KTL +G    E++   A
Sbjct: 362 PIGGFFQQLVDVVIEQNKEIFPEIASGAQDLKEILNEEELSFAKTLDRGEKLFEQYAIIA 421

Query: 450 QDVQGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNK 509
                + LSG+D + L+DTYGFP+DLT+LMAEE GL +D  GF  A +E+RE S+    K
Sbjct: 422 SKTPEQTLSGKDVWRLYDTYGFPVDLTRLMAEEAGLKIDEPGFERAKEESREASKGNGTK 481

Query: 510 QAGGAIVMDADATAALHKRGVLA-TDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGN-E 567
                + +D  A + L K   +  T+D FK+   ++ K+ +  IY GS+F++S+   + +
Sbjct: 482 DGKTLVKLDVHALSELDKNDAIPKTNDEFKY-GTENVKATVVGIYDGSKFVDSIEDSSVQ 540

Query: 568 VGIVLASSSFYAEQGGQIFDEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSV 625
            GI+L  + FYAEQGGQ +D G   I+G    F V NVQ+Y G+V+H G++ E  G+ SV
Sbjct: 541 CGILLDKTPFYAEQGGQEYDTGKIVIDGK-SEFNVSNVQVYAGYVLHTGNILE--GKLSV 597

Query: 626 GEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPV 685
           G+E+I   D  RR  I  NHT TH+LNFALREVLGD VDQKGS+V PEKLRFDFSH + +
Sbjct: 598 GDEIIATYDELRRWPIRNNHTGTHILNFALREVLGDGVDQKGSLVAPEKLRFDFSHKQAL 657

Query: 686 DPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVF 727
            P+ L ++E+I N+ IK    VF K+  LA+AK I G  + F
Sbjct: 658 SPKELEKVEAISNKYIKNNDKVFYKDVALAQAKEITGFESCF 699


>gi|342878270|gb|EGU79625.1| hypothetical protein FOXB_09908 [Fusarium oxysporum Fo5176]
          Length = 959

 Score =  781 bits (2018), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 445/958 (46%), Positives = 600/958 (62%), Gaps = 46/958 (4%)

Query: 56  VEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQ 115
           ++WPA +VR TF ++FE + H    SS VVP NDPTLLF NAGMNQ+KPIFLGT      
Sbjct: 6   LKWPAARVRKTFLEYFEQRGHTIVPSSSVVPHNDPTLLFTNAGMNQFKPIFLGTIGKTDP 65

Query: 116 LSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELL 175
           ++ L  A ++QKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK EAI ++WELL
Sbjct: 66  MAGLKAAVDSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAISYSWELL 125

Query: 176 TKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTG 234
           TK+Y L  DRLY TYF GDEK  L PD EA+++WL   +P   +LP   KDNFWEMGD G
Sbjct: 126 TKIYGLDPDRLYVTYFEGDEKLKLEPDLEAKELWLSVGVPEDHILPGNMKDNFWEMGDQG 185

Query: 235 PCGPCSEIHYDRT-GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTG 293
           PCGPCSEIHYD+  G R+AASLVN DDP  +E+WN VF+Q++R+ DGSLK LPAKH+DTG
Sbjct: 186 PCGPCSEIHYDKVGGGRNAASLVNMDDPMVVEVWNNVFMQYDRQKDGSLKSLPAKHIDTG 245

Query: 294 LGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADH 353
           +G+ERL S LQ+ +SNY TD F P+F  IQ+ TGARPY+ K G DDAD +D AYRVVADH
Sbjct: 246 MGYERLVSALQDTVSNYATDCFTPLFQKIQEVTGARPYADKYGKDDADGIDTAYRVVADH 305

Query: 354 IRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDV 412
           IRTLSF+IADG+ P N+GR YV+RR+LRR VRY  +   A  G FF+ ++  +V  MG+ 
Sbjct: 306 IRTLSFSIADGAVPNNDGRGYVVRRVLRRGVRYARKYFNADIGAFFSKILPALVDQMGEQ 365

Query: 413 FPELKQREAHIREIIAAEEASFGKTLLKGIEKFKK-AAQDVQG--KVLSGQDAFILWDTY 469
           FPEL +++  I+EI+  EE +F +TL +G  +F+K AA+  +G  K L G   + L+DT+
Sbjct: 366 FPELVKKQQDIKEILDEEEVAFARTLDRGEAQFEKYAAEATKGGSKKLEGDVVWRLYDTF 425

Query: 470 GFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR- 528
           GFP+DLT+LMAEER L +D      A  +ARE S++ +      +  ++    + L K  
Sbjct: 426 GFPVDLTRLMAEERSLEIDDAEVEAARIKAREASKAVKESVQTFS-KLNVHQISELEKDL 484

Query: 529 GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESV--VP-GNEVGIVLASSSFYAEQGGQI 585
            V  T+D  KF    D K  ++ IY G  F++S   VP    +G+++  ++FYAE GGQ+
Sbjct: 485 KVERTNDDAKFAQ-GDTKGKVQLIYDGQSFLKSTKDVPEKTALGLLIDKTNFYAESGGQV 543

Query: 586 FDEG-FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
            D G  +      F V +VQ YGG+++H G +  G    S G+EVIC+ D  RR  I  N
Sbjct: 544 ADTGRIVIDDVAEFKVLDVQNYGGYILHSGYIEYGT--LSSGDEVICEYDELRRSPIRNN 601

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+LN +LREVLGD V+QKGS+V  EKLRFDFSH   V  E L++IE + N  I+ +
Sbjct: 602 HSGTHILNHSLREVLGDDVNQKGSLVDNEKLRFDFSHKTGVKIEELKKIEDMSNAYIRRK 661

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
             +FSKE  L  A+ I G RAVFGE YPDPVRVV+IGR ++++LADP+ KEW   S E C
Sbjct: 662 DKIFSKEVDLELARQIEGCRAVFGETYPDPVRVVSIGRDIDEMLADPKKKEWRQYSVEFC 721

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVD-------- 816
           GGTH+  T   +   L+ E GIAKGIRRI A T   A++    A    K++D        
Sbjct: 722 GGTHVEQTGLIKDLILIEESGIAKGIRRIIAYTGEAAHQVQREADEFSKKIDALDKLPFG 781

Query: 817 ------------DASKIEGSLLEKNQVRKAQKKVA------EENLQKA-VKVATETAEA- 856
                       + S++  S L K++  K  +K++      ++  QKA  K A +  +  
Sbjct: 782 PEKEAQVKAVSVELSQLTISTLTKDEFNKRFQKISAAVTAEQKKRQKAESKTALDIVQKY 841

Query: 857 -AASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKS 915
             A+    + + R+ VG   +     V+K  + K     V+    +  +  V  GV   +
Sbjct: 842 FEANKDAKWFVGRLPVGATGSKALPDVVKHYQGKDKEKTVYLFAGSKEEGAVAHGVYVGT 901

Query: 916 DQSKQ-LEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKLR 972
             + Q +   +W  +  + + GR G GK  +  GQGT    +   ++ A ++   KL+
Sbjct: 902 HLASQGVTAEQWAASVSEIIGGRSG-GKEPVRQGQGTKPENIDEGVETATKWLNEKLK 958


>gi|345566669|gb|EGX49611.1| hypothetical protein AOL_s00078g100 [Arthrobotrys oligospora ATCC
           24927]
          Length = 940

 Score =  780 bits (2014), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/779 (50%), Positives = 515/779 (66%), Gaps = 21/779 (2%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           +WPATKVR TF +FFE K HV +KSSP VP++D TLLFANAGMNQ+KPIFLGT D  +  
Sbjct: 21  KWPATKVRQTFIEFFEKKGHVFYKSSPCVPLDDKTLLFANAGMNQFKPIFLGTVDETSDF 80

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
            KL RACNTQKCIRAGGKHNDL+DVG D+YHHTFFEMLGNWSFGDYFK EA+ ++WELLT
Sbjct: 81  GKLKRACNTQKCIRAGGKHNDLEDVGSDSYHHTFFEMLGNWSFGDYFKTEAVAYSWELLT 140

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
           KVY L   RLY TYF GD  +GL PD E +++W K  +P   +LP   KDNFWEMGD GP
Sbjct: 141 KVYGLDPARLYVTYFEGDRASGLEPDLETKELWRKAGVPDDHILPGNVKDNFWEMGDQGP 200

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPC+E+HYDR G R+AA LVNNDDP  +EIWN VFIQFNR  D +LKPLP KHVDTG+G
Sbjct: 201 CGPCTEVHYDRIGGRNAAKLVNNDDPNVLEIWNNVFIQFNRGEDKTLKPLPHKHVDTGMG 260

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
           FERL SILQ+K SNYDTDVF P+F  IQ+    R Y GK G +D D +D  YRVVADH+R
Sbjct: 261 FERLVSILQDKSSNYDTDVFKPLFLKIQEVAKIRSYEGKFGHEDVDSIDKTYRVVADHLR 320

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFP 414
           TLSF IADG  P N+GR YVLRRI+RR  RY  + +K   G FF+ L+  +V+ +G  FP
Sbjct: 321 TLSFGIADGGRPDNDGRGYVLRRIVRRGARYARKFMKVNIGSFFSSLLPALVEQLGPTFP 380

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQ--DVQGKVLSGQDAFILWDTYGFP 472
           ELK+ +A I++++  EE SF +TL +G +KF++ A+        ++G + + L+DTYGFP
Sbjct: 381 ELKEHQALIKKLLDMEEESFARTLDRGEKKFEQLAELATTTKTPIAGHEVWKLYDTYGFP 440

Query: 473 LDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLA 532
           LDLT +MAEE  + +D +G   A  +A+E S+  +       + +D  A AAL +  + A
Sbjct: 441 LDLTYIMAEESSVKIDTDGVLVAEKKAKEISKVKKVIDGITRLTLDVHALAALKEENIPA 500

Query: 533 TDDSFKFIWFQD---HKSVIKAIYTGSEFIES---VVPGNEVGIVLASSSFYAEQGGQIF 586
            +D  KF+W  +     S I  I+    F++S   +    +VGI+L  +  YAEQGGQI+
Sbjct: 501 ANDEAKFLWGDEAILRDSKILKIFVKEGFVKSTEGLEDDVQVGILLDKTCLYAEQGGQIY 560

Query: 587 DEGFIEGLFGS-FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
           D G I     S  +V +V  +G + +H G++  G     VG+ V  + D  RR LI  NH
Sbjct: 561 DFGTISIPGKSEIFVDHVVYHGKYALHSGTVKYGT--LKVGDVVQVEYDEARRSLIRVNH 618

Query: 646 TCTHMLNFALREVL---GDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIK 702
           T TH+LN+AL+EVL   G  V Q+GS+V   K RFD S   P+ PE + ++E+  N  I 
Sbjct: 619 TATHVLNYALKEVLAKNGGEVHQRGSLVDQLKTRFDISWDGPISPEQIEKVENESNSYIN 678

Query: 703 AELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAE 762
            ++ V++KE  +  A+ I G+RAVFGE YPDPVRVV++G  +  ++ +P + +W  +S E
Sbjct: 679 QKVAVYTKEIDIKTAQAITGVRAVFGEKYPDPVRVVSLGIDLNLIVENPTDPQWAKVSIE 738

Query: 763 LCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTT----GLAYKAFEAACSLEKEVDD 817
            CGGTHL    +     +  E GI KGIRR+  VT     G+     E A  L KEVD+
Sbjct: 739 FCGGTHLKTVSDITEMVITEESGIGKGIRRVVCVTNEIAAGIRVLEREIAAKL-KEVDE 796


>gi|313229137|emb|CBY23722.1| unnamed protein product [Oikopleura dioica]
          Length = 941

 Score =  775 bits (2002), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 445/968 (45%), Positives = 593/968 (61%), Gaps = 89/968 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A +VR  F  FF++  H    SS  +P +DPTLLFANAGMNQ+K IF+GT DP++ ++KL
Sbjct: 7   ANEVRQQFLDFFKELEHPYVHSSSTIPHDDPTLLFANAGMNQFKSIFVGTIDPSSPMAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
             A N+QKCIRAGGKHNDLDDVGKD+YHHTFFEMLG+WSFGDYFK EAI+W++ELL KV+
Sbjct: 67  KSAVNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGSWSFGDYFKKEAIQWSFELLNKVW 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
            +PADRLYATYF G+ + GL PDNEAR+ WLK+LPA ++LP   KDNFWEMGDTGPCGPC
Sbjct: 127 GIPADRLYATYFEGNPEEGLEPDNEAREEWLKYLPADQILPGNAKDNFWEMGDTGPCGPC 186

Query: 240 SEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERL 299
           SE+HYDR G R+A+SLVN DDP  +EIWN+VF+Q++R++D SL  LPAK VDTG+G ER+
Sbjct: 187 SELHYDRIGGRNASSLVNMDDPDVLEIWNLVFMQYDRQADKSLISLPAKSVDTGMGLERV 246

Query: 300 TSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSF 359
            S+LQ+K +NYDTD+F P F  I+  TG R Y+G  GA+D D VDMAYRV+ADH RTLS 
Sbjct: 247 VSVLQDKRANYDTDMFSPYFKKIEDLTGTRAYTGLFGAEDKDGVDMAYRVLADHARTLSI 306

Query: 360 AIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQR 419
           A+ADG  P N GR YVLRRILRRA+RYG E L  +   F  LV++VV+ +GD FPELK+ 
Sbjct: 307 ALADGGRPDNVGRGYVLRRILRRAIRYGHEKLNMKVDDFVALVDVVVESLGDAFPELKKD 366

Query: 420 EAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ-GKVLSGQDAFILWDTYGFPLDLTQL 478
               +EI+  E   F KTL +G +  ++  + +     L G  A++L+DTYGFPLDLT L
Sbjct: 367 PESTKEILKEEWIQFMKTLDRGQKILERKIKQLNLTDRLPGDVAWLLYDTYGFPLDLTTL 426

Query: 479 MAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSFK 538
           +AEE  L +  E F     +A ERS+ A                      GV  TDDS K
Sbjct: 427 IAEEHNLTLSCEEFEEERQKAIERSKGAD---------------------GVATTDDSHK 465

Query: 539 FIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEG 589
             +         F   K+ + A+    EF +      EVGIVL  ++FYAEQGGQI+D G
Sbjct: 466 QNYEANSAGEYTFNSIKAKVVALRFNKEFHQE-CESCEVGIVLDKTNFYAEQGGQIYDLG 524

Query: 590 FIEGLFG---SFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
           +          F V+NVQ+  G+V+H+G+L    G+ SVG+E+   +D +RR  I PNHT
Sbjct: 525 YFSRENDDDFEFNVKNVQVRAGYVLHVGTLV---GKLSVGDEINLNIDTERRVNIMPNHT 581

Query: 647 CTHMLNFALREVLGD-HVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
            TH+LNF LR VLG+   DQKGS+V PE+LRFDF+ G  + P  ++++E I NE I    
Sbjct: 582 GTHVLNFGLRCVLGEGEADQKGSLVAPERLRFDFTAGGALKPAQIKQVEEICNEVITRGG 641

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            V  + + LA++K I GLRA+F E YPDPVRVV+IG  V +LL +P +      S E CG
Sbjct: 642 AVHCQVSPLAQSKAIQGLRAMFDETYPDPVRVVSIGVPVNELLENPTSGAADKTSVEFCG 701

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSL-------EKEVDD- 817
           GTHL +   A    + +EE I+KGIRR+ AVT   A KA   A  L       EK+V++ 
Sbjct: 702 GTHLRDISHARKLIITAEEAISKGIRRVIAVTGAEAEKADRQAQRLAKANQLKEKDVNEL 761

Query: 818 ASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEV------ 871
            ++++ ++  KN     Q+ ++   L K ++VA  +A   A        S++E+      
Sbjct: 762 KAEVKEAIKAKNTAEANQRAIS---LGKTIEVAPISAWKRAELVDAVKKSKMEIVQYEQK 818

Query: 872 ----------GLDAAAVREA----------------VLKVIEQKG--MPVMVFSTDETTN 903
                      +DA  V E                 +LK+  +K     V++FS D T  
Sbjct: 819 VEEYGIQTEKRIDAGDVAEPEVLLLDAGSNNKVLNEILKLYAKKSPKSHVLLFSADHTAK 878

Query: 904 KAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLA 963
           K +  A  P+ S     L+ +EW+++    + GR G GK   A   G + + +  A+  A
Sbjct: 879 KVLCLAQTPKGS----TLKANEWVSSISPLIDGRGG-GKDVQAQASGKNVSGLKGALAKA 933

Query: 964 AEFAAMKL 971
            EFAA  L
Sbjct: 934 KEFAAANL 941


>gi|440467325|gb|ELQ36554.1| alanyl-tRNA synthetase [Magnaporthe oryzae Y34]
 gi|440479248|gb|ELQ60029.1| alanyl-tRNA synthetase [Magnaporthe oryzae P131]
          Length = 961

 Score =  773 bits (1997), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 443/960 (46%), Positives = 594/960 (61%), Gaps = 50/960 (5%)

Query: 56  VEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQ 115
           V+W A  VR TF  +FE++ H    SS VVP +DPTLLF NAGMNQ+KPIFLGT      
Sbjct: 5   VKWTAETVRKTFLNYFEERGHTVVPSSSVVPHSDPTLLFTNAGMNQFKPIFLGTIGKTDP 64

Query: 116 LSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELL 175
           ++ L RA ++QKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK EAI  +WELL
Sbjct: 65  MAGLKRAVDSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAISMSWELL 124

Query: 176 TKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTG 234
           TKVY L   RLY TYF G+ + GL PD EA+++WL+  +P   +LP   KDNFWEMGD G
Sbjct: 125 TKVYGLDPARLYVTYFEGNPEMGLEPDLEAKNLWLENGVPEDHILPGNMKDNFWEMGDQG 184

Query: 235 PCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           PCGPCSEIHYD+ G R+AA LVN DDP  +E+WN VFIQF+R+ D SLK LPAKHVDTG+
Sbjct: 185 PCGPCSEIHYDKVGGRNAAHLVNMDDPLVVEVWNNVFIQFDRQQDKSLKSLPAKHVDTGM 244

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL S LQNK SNY TDVF P+F  IQ+ TGAR Y+ K G DDAD +D AYRVVADHI
Sbjct: 245 GFERLVSALQNKTSNYATDVFSPLFARIQEVTGAREYTDKYGKDDADGIDTAYRVVADHI 304

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQ-DGFFNGLVNIVVKVMGDVF 413
           R ++F+IADG+ P N+GR YV+RR+LRR VRY  +   A+  GFF+ ++  +V+ MG+ F
Sbjct: 305 RLMAFSIADGAVPNNDGRGYVVRRVLRRGVRYARKYFNAEIGGFFSQILPTLVEHMGEQF 364

Query: 414 PELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQ---DVQGKVLSGQDAFILWDTYG 470
           PEL Q++  I+EI+  EE +F +TL +G ++F+K A          LSG D + L+DT+G
Sbjct: 365 PELGQKQQDIKEILDEEEEAFARTLDRGEKQFEKYASMAIKAGENKLSGSDVWRLYDTFG 424

Query: 471 FPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR-G 529
           FP DLT+LMAEERG+ +D    + A ++ARE S++ +      A  +D    + L     
Sbjct: 425 FPEDLTKLMAEERGITIDEAEVSVAREKAREASKAVKESVQTFA-KLDVHRISELENELK 483

Query: 530 VLATDDSFKFIWFQDHKSVIKAIYTGSEFIES---VVPGNEVGIVLASSSFYAEQGGQIF 586
           V  TD   K++   D  S +  IYTG +F++S   + P   +G++L  ++FYAE GGQI 
Sbjct: 484 VTRTDSEAKYLK-GDITSKVYLIYTGKDFLKSSKEIPPKTPLGLILDKTNFYAESGGQIA 542

Query: 587 DEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           D G   I+G+   F V + Q +GG+V+H G L    G  + G+ VIC+ D  RR+ I  N
Sbjct: 543 DTGRIVIDGV-AEFKVLDTQEFGGYVLHNGYLE--YGELTAGDSVICEYDELRRQPIRNN 599

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           HT TH+LN +LREVLGD ++QKGS+V  EKLRFDFSH   V    L++IE + N  I+  
Sbjct: 600 HTGTHILNHSLREVLGDDINQKGSLVDNEKLRFDFSHKTGVTVPELKKIEDLSNAYIRQN 659

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
              F+K+  L  AK I G+RAVFGE YP+PVRVV+IG +V+ LL +P+N EW  +S E C
Sbjct: 660 CKTFTKDVDLDLAKQIEGVRAVFGETYPNPVRVVSIGIEVDMLLENPKNPEWRKVSVEFC 719

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVD-------- 816
           GGTH+  T   +   ++ E GIAKGIRRI A T   A++    A    K +D        
Sbjct: 720 GGTHVDQTGIMKDMIIVEESGIAKGIRRIVAYTGDAAHQVQRLAADFSKRIDELESLPFG 779

Query: 817 ------------DASKIEGSLLEKNQVR----KAQKKVAEENLQKAVKVATETAEAAASN 860
                       D  ++  S + K+++R    K QK V EE  +K    + +  +  A +
Sbjct: 780 TEKEAAIKTTQVDLEQLVISSVTKDELRTRFTKIQKAVVEEQKKKQKAESKKALDTVAEH 839

Query: 861 GK-------PFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPE 913
            K          I ++ +  +A AV E ++   + K     V+    +  +  V  GV  
Sbjct: 840 FKKPEKAESKVFIGQLPISANAKAVSE-IMNFYKSKDKEKSVYVFGGSKEEGAVVHGVYV 898

Query: 914 KSDQSKQ-LEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKLR 972
            +  + Q +   +W  A  + + G+ G GK     GQGT    +  A+  A +F   K++
Sbjct: 899 GTALASQGITAEQWANAVSEVIGGKSG-GKEPTRQGQGTKPENLEQAVAEAEKFLTEKIK 957


>gi|389637306|ref|XP_003716291.1| alanyl-tRNA synthetase [Magnaporthe oryzae 70-15]
 gi|351642110|gb|EHA49972.1| alanyl-tRNA synthetase [Magnaporthe oryzae 70-15]
          Length = 1084

 Score =  773 bits (1995), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 443/960 (46%), Positives = 594/960 (61%), Gaps = 50/960 (5%)

Query: 56   VEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQ 115
            V+W A  VR TF  +FE++ H    SS VVP +DPTLLF NAGMNQ+KPIFLGT      
Sbjct: 128  VKWTAETVRKTFLNYFEERGHTVVPSSSVVPHSDPTLLFTNAGMNQFKPIFLGTIGKTDP 187

Query: 116  LSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELL 175
            ++ L RA ++QKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK EAI  +WELL
Sbjct: 188  MAGLKRAVDSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAISMSWELL 247

Query: 176  TKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTG 234
            TKVY L   RLY TYF G+ + GL PD EA+++WL+  +P   +LP   KDNFWEMGD G
Sbjct: 248  TKVYGLDPARLYVTYFEGNPEMGLEPDLEAKNLWLENGVPEDHILPGNMKDNFWEMGDQG 307

Query: 235  PCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
            PCGPCSEIHYD+ G R+AA LVN DDP  +E+WN VFIQF+R+ D SLK LPAKHVDTG+
Sbjct: 308  PCGPCSEIHYDKVGGRNAAHLVNMDDPLVVEVWNNVFIQFDRQQDKSLKSLPAKHVDTGM 367

Query: 295  GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
            GFERL S LQNK SNY TDVF P+F  IQ+ TGAR Y+ K G DDAD +D AYRVVADHI
Sbjct: 368  GFERLVSALQNKTSNYATDVFSPLFARIQEVTGAREYTDKYGKDDADGIDTAYRVVADHI 427

Query: 355  RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQ-DGFFNGLVNIVVKVMGDVF 413
            R ++F+IADG+ P N+GR YV+RR+LRR VRY  +   A+  GFF+ ++  +V+ MG+ F
Sbjct: 428  RLMAFSIADGAVPNNDGRGYVVRRVLRRGVRYARKYFNAEIGGFFSQILPTLVEHMGEQF 487

Query: 414  PELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQ---DVQGKVLSGQDAFILWDTYG 470
            PEL Q++  I+EI+  EE +F +TL +G ++F+K A          LSG D + L+DT+G
Sbjct: 488  PELGQKQQDIKEILDEEEEAFARTLDRGEKQFEKYASMAIKAGENKLSGSDVWRLYDTFG 547

Query: 471  FPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR-G 529
            FP DLT+LMAEERG+ +D    + A ++ARE S++ +      A  +D    + L     
Sbjct: 548  FPEDLTKLMAEERGITIDEAEVSVAREKAREASKAVKESVQTFA-KLDVHRISELENELK 606

Query: 530  VLATDDSFKFIWFQDHKSVIKAIYTGSEFIES---VVPGNEVGIVLASSSFYAEQGGQIF 586
            V  TD   K++   D  S +  IYTG +F++S   + P   +G++L  ++FYAE GGQI 
Sbjct: 607  VTRTDSEAKYLK-GDITSKVYLIYTGKDFLKSSKEIPPKTPLGLILDKTNFYAESGGQIA 665

Query: 587  DEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
            D G   I+G+   F V + Q +GG+V+H G L    G  + G+ VIC+ D  RR+ I  N
Sbjct: 666  DTGRIVIDGV-AEFKVLDTQEFGGYVLHNGYLE--YGELTAGDSVICEYDELRRQPIRNN 722

Query: 645  HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
            HT TH+LN +LREVLGD ++QKGS+V  EKLRFDFSH   V    L++IE + N  I+  
Sbjct: 723  HTGTHILNHSLREVLGDDINQKGSLVDNEKLRFDFSHKTGVTVPELKKIEDLSNAYIRQN 782

Query: 705  LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
               F+K+  L  AK I G+RAVFGE YP+PVRVV+IG +V+ LL +P+N EW  +S E C
Sbjct: 783  CKTFTKDVDLDLAKQIEGVRAVFGETYPNPVRVVSIGIEVDMLLENPKNPEWRKVSVEFC 842

Query: 765  GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVD-------- 816
            GGTH+  T   +   ++ E GIAKGIRRI A T   A++    A    K +D        
Sbjct: 843  GGTHVDQTGIMKDMIIVEESGIAKGIRRIVAYTGDAAHQVQRLAADFSKRIDELESLPFG 902

Query: 817  ------------DASKIEGSLLEKNQVR----KAQKKVAEENLQKAVKVATETAEAAASN 860
                        D  ++  S + K+++R    K QK V EE  +K    + +  +  A +
Sbjct: 903  TEKEAAIKTTQVDLEQLVISSVTKDELRTRFTKIQKAVVEEQKKKQKAESKKALDTVAEH 962

Query: 861  GK-------PFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPE 913
             K          I ++ +  +A AV E ++   + K     V+    +  +  V  GV  
Sbjct: 963  FKKPEKAESKVFIGQLPISANAKAVSE-IMNFYKSKDKEKSVYVFGGSKEEGAVVHGVYV 1021

Query: 914  KSDQSKQ-LEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKLR 972
             +  + Q +   +W  A  + + G+ G GK     GQGT    +  A+  A +F   K++
Sbjct: 1022 GTALASQGITAEQWANAVSEVIGGKSG-GKEPTRQGQGTKPENLEQAVAEAEKFLTEKIK 1080


>gi|350296965|gb|EGZ77942.1| cytosolic probable alanine--tRNA ligase [Neurospora tetrasperma
           FGSC 2509]
          Length = 961

 Score =  771 bits (1992), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 450/967 (46%), Positives = 610/967 (63%), Gaps = 66/967 (6%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           +W   +VR TF  FF ++ H    SS VVP NDPTLLF NAGMNQ+KPIFLGT      +
Sbjct: 6   QWTGVQVRKTFLDFFAERGHNVVPSSSVVPHNDPTLLFTNAGMNQFKPIFLGTIGKTEDM 65

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
           ++L RA +TQKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK EAI W+WELLT
Sbjct: 66  AQLKRAVDTQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIAWSWELLT 125

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
           KVY L   RLY TYF G    GL PD EA+++WL+  +P   ++P   KDNFWEMGD GP
Sbjct: 126 KVYGLDPQRLYVTYFEGSPDLGLEPDLEAKNLWLEVGVPEDHIIPGNMKDNFWEMGDQGP 185

Query: 236 CGPCSEIHYDRT-GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           CGPCSEIHYD+  G R+AA LVN DDP  +E+WNIVFIQF+R++D SLK LPAKH+DTG+
Sbjct: 186 CGPCSEIHYDKVGGGRNAAHLVNMDDPLVVEVWNIVFIQFDRQADKSLKSLPAKHIDTGM 245

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL S LQ+K SNY TD+F P+F  IQ+ TGAR Y+ K G DD D +D AYRV+ADHI
Sbjct: 246 GFERLVSALQDKTSNYATDIFTPLFTKIQEVTGAREYTDKYGKDDVDGIDTAYRVIADHI 305

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVF 413
           R LSFAIADG+ P N GR YV+RR+LRR VRY  +   A+ G FF+ ++  +V+ MG+ F
Sbjct: 306 RLLSFAIADGAAPNNVGRGYVVRRVLRRGVRYARKYFNAEIGTFFSKILPALVEQMGEQF 365

Query: 414 PELKQREAHIREIIAAEEASFGKTLLKGIEKFKK-AAQDVQG--KVLSGQDAFILWDTYG 470
           PEL +++  I+EI+  EE +F  TL +G ++F+K AA  ++   K LSG D + L+DT+G
Sbjct: 366 PELVKKQTDIKEILDEEEVAFAVTLDRGEKQFEKYAALAIKSGEKKLSGADVWRLYDTFG 425

Query: 471 FPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGV 530
           FP DLT+LMAEERGL +D    N A ++ARE S++ +      A  ++    A L     
Sbjct: 426 FPEDLTKLMAEERGLTIDEAEVNEAREKAREASKAVKEAVQEFA-KLNVHQIAELETSLN 484

Query: 531 LATDDSFKFIWFQDHKSVIKAIYTGSEFIESV--VPGNE-VGIVLASSSFYAEQGGQIFD 587
           +   +S       D K  ++ I+ G EF++S   +P    +G++L +++FYAE GGQ+ D
Sbjct: 485 IPRPNSDAKFLKGDTKGKVQLIFNGKEFLKSSKDLPAKTPLGLLLDNTNFYAESGGQVAD 544

Query: 588 EG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            G   I+G+   F V +VQ YGG+++H G L    G  + G+EV+C+ D  RR+ I  NH
Sbjct: 545 TGRIIIDGV-AEFKVLDVQEYGGYIVHNGFLE--YGELTEGDEVVCEYDELRRQPIRNNH 601

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           T TH+LN +LREVLGD ++QKGS+V  +KLRFDFSH   +  E +++IE + N  I+  L
Sbjct: 602 TGTHILNHSLREVLGDEINQKGSLVDQDKLRFDFSHKAAISLEDIKKIEDLSNHYIRQNL 661

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
             +SK+  L  A+ I G+RAVFGE YP+PVRVV+IG +V++LL +P+N EW  IS E CG
Sbjct: 662 KAYSKDVDLDLAREIEGVRAVFGETYPNPVRVVSIGMEVDELLKNPKNPEWRKISVEFCG 721

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDD-------- 817
           GTH+ NT   +   ++ E GIAKGIRRI A T   A++A   A    ++++         
Sbjct: 722 GTHVENTGLIKDLIIVEESGIAKGIRRIVAYTGEGAHQAQREAQVFNEKLNHINALAYGP 781

Query: 818 ---------ASKIEG---SLLEKNQVR----KAQKKVAEENLQKAVKVATETA-EAAASN 860
                    A +++G   S+L K ++R    K QK+V +E  +K  K  ++TA +  AS+
Sbjct: 782 QKAAEIKAAAVELDGLTISVLTKEELRTRFTKIQKEVVDEQ-KKRQKAESKTALDTVASH 840

Query: 861 GKP--FCISRVEVG-LDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQ 917
            +      S+V VG L  +A  +A+  VI         + T +      V AG   K DQ
Sbjct: 841 FQKDENKESKVFVGHLPISANAKAISDVI-------TYYKTKDKERSVYVFAG--SKDDQ 891

Query: 918 ------------SKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAE 965
                       SK +   +W +A    + G+ G GK     G G +  ++  A+  A E
Sbjct: 892 VMHGVYVGTALSSKGVTAEQWTSAVSAVIGGKTG-GKEPSRQGAGAEPEKLEEAVKKAEE 950

Query: 966 FAAMKLR 972
           + + KL+
Sbjct: 951 WLSEKLK 957


>gi|164427876|ref|XP_965697.2| alanyl-tRNA synthetase [Neurospora crassa OR74A]
 gi|38567140|emb|CAE76435.1| probable alanine--tRNA ligase, cytosolic [Neurospora crassa]
 gi|157071919|gb|EAA36461.2| alanyl-tRNA synthetase [Neurospora crassa OR74A]
 gi|336464861|gb|EGO53101.1| hypothetical protein NEUTE1DRAFT_126487 [Neurospora tetrasperma
           FGSC 2508]
          Length = 961

 Score =  771 bits (1991), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 450/967 (46%), Positives = 610/967 (63%), Gaps = 66/967 (6%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           +W   +VR TF  FF ++ H    SS VVP NDPTLLF NAGMNQ+KPIFLGT      +
Sbjct: 6   QWTGVQVRKTFLDFFAERGHNVVPSSSVVPHNDPTLLFTNAGMNQFKPIFLGTIGKTEDM 65

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
           ++L RA +TQKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK EAI W+WELLT
Sbjct: 66  AQLKRAVDTQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIAWSWELLT 125

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
           KVY L   RLY TYF G    GL PD EA+++WL+  +P   ++P   KDNFWEMGD GP
Sbjct: 126 KVYGLDPQRLYVTYFEGSPDLGLEPDLEAKNLWLEVGVPEDHIIPGNMKDNFWEMGDQGP 185

Query: 236 CGPCSEIHYDRT-GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           CGPCSEIHYD+  G R+AA LVN DDP  +E+WNIVFIQF+R++D SLK LPAKH+DTG+
Sbjct: 186 CGPCSEIHYDKVGGGRNAAHLVNMDDPLVVEVWNIVFIQFDRQADKSLKSLPAKHIDTGM 245

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL S LQ+K SNY TD+F P+F  IQ+ TGAR Y+ K G DD D +D AYRV+ADHI
Sbjct: 246 GFERLVSALQDKTSNYATDIFTPLFTKIQEVTGAREYTDKYGKDDVDGIDTAYRVIADHI 305

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVF 413
           R LSFAIADG+ P N GR YV+RR+LRR VRY  +   A+ G FF+ ++  +V+ MG+ F
Sbjct: 306 RLLSFAIADGAAPNNVGRGYVVRRVLRRGVRYARKYFNAEIGTFFSKILPALVEQMGEQF 365

Query: 414 PELKQREAHIREIIAAEEASFGKTLLKGIEKFKK-AAQDVQG--KVLSGQDAFILWDTYG 470
           PEL +++  I+EI+  EE +F  TL +G ++F+K AA  ++   K LSG D + L+DT+G
Sbjct: 366 PELVKKQTDIKEILDEEEVAFAVTLDRGEKQFEKYAALAIKSGEKKLSGADVWRLYDTFG 425

Query: 471 FPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGV 530
           FP DLT+LMAEERGL +D    N A ++ARE S++ +      A  ++    A L     
Sbjct: 426 FPEDLTKLMAEERGLTIDEAEVNEAREKAREASKAVKEAVQEFA-KLNVHQIAELETALN 484

Query: 531 LATDDSFKFIWFQDHKSVIKAIYTGSEFIESV--VPGNE-VGIVLASSSFYAEQGGQIFD 587
           +   +S       D K  ++ I+ G EF++S   +P    +G++L +++FYAE GGQ+ D
Sbjct: 485 IPRPNSDAKFLKGDTKGKVQLIFNGKEFLKSSKDLPAKTPLGLLLDNTNFYAESGGQVAD 544

Query: 588 EG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            G   I+G+   F V +VQ YGG+++H G L    G  + G+EV+C+ D  RR+ I  NH
Sbjct: 545 TGRIIIDGV-AEFKVLDVQEYGGYIVHNGFLE--YGELTEGDEVVCEYDELRRQPIRNNH 601

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           T TH+LN +LREVLGD ++QKGS+V  +KLRFDFSH   +  E +++IE + N  I+  L
Sbjct: 602 TGTHILNHSLREVLGDEINQKGSLVDQDKLRFDFSHKAAISLEDIKKIEDLSNHYIRQNL 661

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
             +SK+  L  A+ I G+RAVFGE YP+PVRVV+IG +V++LL +P+N EW  IS E CG
Sbjct: 662 KAYSKDVDLDLAREIEGVRAVFGETYPNPVRVVSIGMEVDELLKNPKNPEWRKISVEFCG 721

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDD-------- 817
           GTH+ NT   +   ++ E GIAKGIRRI A T   A++A   A    ++++         
Sbjct: 722 GTHVENTGLIKDLIIVEESGIAKGIRRIVAYTGEGAHQAQREAQVFNEKLNHINALAYGP 781

Query: 818 ---------ASKIEG---SLLEKNQVR----KAQKKVAEENLQKAVKVATETA-EAAASN 860
                    A +++G   S+L K ++R    K QK+V +E  +K  K  ++TA +  AS+
Sbjct: 782 QKAAEIKAAAVELDGLTISVLTKEELRTRFTKIQKEVVDEQ-KKRQKAESKTALDTVASH 840

Query: 861 GKP--FCISRVEVG-LDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQ 917
            +      S+V VG L  +A  +A+  VI         + T +      V AG   K DQ
Sbjct: 841 FQKDENKESKVFVGHLPISANAKAISDVI-------TYYKTKDKERSVYVFAG--SKDDQ 891

Query: 918 ------------SKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAE 965
                       SK +   +W +A    + G+ G GK     G G +  ++  A+  A E
Sbjct: 892 VMHGVYVGTALSSKGVTAEQWTSAVSAVIGGKTG-GKEPSRQGAGAEPEKLEEAVKKAEE 950

Query: 966 FAAMKLR 972
           + + KL+
Sbjct: 951 WLSEKLK 957


>gi|323452905|gb|EGB08778.1| hypothetical protein AURANDRAFT_53556 [Aureococcus anophagefferens]
          Length = 1031

 Score =  769 bits (1986), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/798 (50%), Positives = 515/798 (64%), Gaps = 65/798 (8%)

Query: 58  WPATKVRDTFFKFFED-KNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLG-------- 108
           WPA K+RDTF +     + H +W SS VVP  DPTLLFANAGMNQYK IFLG        
Sbjct: 27  WPAKKIRDTFVQRAGGARGHTHWPSSSVVPHEDPTLLFANAGMNQYKSIFLGLAPRRKRR 86

Query: 109 ------------------TADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTF 150
                             T DP T+++ L RACN+QKCIRAGGKHNDLDDVGKD YHHTF
Sbjct: 87  RATPDDYNTPLPIPSFGGTIDPKTKMATLKRACNSQKCIRAGGKHNDLDDVGKDLYHHTF 146

Query: 151 FEMLGNWSFGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGD--EKAGLAPDNEARDI 208
           FEMLGNWSFGDYFK EAI  AWE LT  ++L  DRLY TYFGGD  +  G+  D E R I
Sbjct: 147 FEMLGNWSFGDYFKEEAIRMAWECLTVEFQLDPDRLYVTYFGGDALKAPGVPSDEETRQI 206

Query: 209 WLKFLPASRVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWN 268
           WLK++PA RVLPF   DNFWEMGDTGPCGPC+EIHYDR G RDAA+LVN DDP  IEIWN
Sbjct: 207 WLKYVPAERVLPFDAGDNFWEMGDTGPCGPCTEIHYDRVGGRDAAALVNMDDPDVIEIWN 266

Query: 269 IVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGA 328
            VFIQ+NR+  G LK LPA+HVDTG+GFERL SILQ +MSNYDTD+F P+F  IQ  +G 
Sbjct: 267 NVFIQYNRDKFG-LKELPAQHVDTGMGFERLASILQGQMSNYDTDIFTPLFAEIQAVSGC 325

Query: 329 R-PYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYG 387
              Y+GK+G +D +  DMAYRVVADH+RTL+FAI DG+ P  +GR YVLRR+LRRAV YG
Sbjct: 326 PVAYAGKIGDEDKETKDMAYRVVADHVRTLTFAITDGAVPDTQGRGYVLRRVLRRAVWYG 385

Query: 388 SEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKK 447
              L A  GF   LV  + +V+G+ FPE+ + +  +  ++  EE  F +T+ KG   F K
Sbjct: 386 QHFLGAPKGFVYKLVPKLCEVLGEAFPEIVKAKDTVMAVLEGEERDFNRTIDKGARFFNK 445

Query: 448 AAQDV-QGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERS--- 503
            A+ + +G    G DAF+L  + GFPLDL ++MAEERG+ VD+ G++ A+ E ++++   
Sbjct: 446 QAEKLPKGAPFPGSDAFVLSGSLGFPLDLCEIMAEERGMTVDVAGYHAALKEEQDKNAAA 505

Query: 504 --RSAQNKQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYT------- 554
             +    + AG  +   A+ TAAL   G   T+   K++W     + + A+Y        
Sbjct: 506 LAKRKAARSAGADMTCAAEQTAALAAAGAPKTESEGKYVWNARPAAKVVALYVGKGGGPK 565

Query: 555 GSEFIESVVPGNE--VGIVLASSSFYAEQGGQIFDEG-FIEGLFGSFYVRNVQIYGGFVI 611
           G   +++V P      G VL ++SFYAE GGQ++D G  ++       V +VQ+YGG+V+
Sbjct: 566 GDGLVDAVDPSKHAVAGAVLDATSFYAEMGGQVYDTGALLKDDAKILDVEDVQVYGGYVV 625

Query: 612 HIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVL------------ 659
           H+G+     G   VG++V C VDYDRR  +APNHT TH+LNFALREVL            
Sbjct: 626 HVGAPL---GPLKVGDDVACAVDYDRRVRVAPNHTMTHVLNFALREVLLGGSEGAKADAE 682

Query: 660 ---GDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAE 716
               D   Q+GS V  E+LRFDF+   P+  + L+ +E+IVNE I A L V + E  L  
Sbjct: 683 KTGVDRCAQRGSYVDDERLRFDFAWDAPLTADQLKAVEAIVNETIAAGLVVDAVETPLDA 742

Query: 717 AKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAE 776
           A  +  LRA+ GE YPDPVRVVA+G  V D++A P    W  +S ELCGGTH+ NT++A 
Sbjct: 743 AMAVESLRAMKGEAYPDPVRVVAVGAPVADVVAAPCGAAWRGMSVELCGGTHVRNTKDAV 802

Query: 777 AFALLSEEGIAKGIRRIT 794
            FALL E GIAKG+RR+ 
Sbjct: 803 GFALLEENGIAKGVRRVV 820


>gi|310789965|gb|EFQ25498.1| tRNA synthetase class II [Glomerella graminicola M1.001]
          Length = 955

 Score =  768 bits (1982), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 446/954 (46%), Positives = 588/954 (61%), Gaps = 44/954 (4%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           +WP   VR TF +FFE + H    SS VVP NDPTLLF NAGMNQ+KPIFLGT      +
Sbjct: 5   KWPGVVVRKTFLEFFEKRGHTIVPSSSVVPHNDPTLLFTNAGMNQFKPIFLGTISKADPM 64

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
             L RA +TQKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK EAIEW+WELLT
Sbjct: 65  YPLKRATDTQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIEWSWELLT 124

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
           KVY L  DRLY TYF G+   GL PD EA+ +W    +P   +LP   KDNFWEMGD GP
Sbjct: 125 KVYGLDPDRLYVTYFEGNPDMGLEPDLEAKGLWQSVGVPEDHILPGNMKDNFWEMGDQGP 184

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPCSE+HYD+ G R+A+ LVN DDP  +EIWN VFIQ++R+ D SLK LPAKHVDTG+G
Sbjct: 185 CGPCSEVHYDKIGGRNASDLVNQDDPMVVEIWNNVFIQYDRQPDRSLKSLPAKHVDTGMG 244

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
           FERL S LQN +SNY TD+F P+F  I++ TGARPY+ K GADD D +D AYRV+ADHIR
Sbjct: 245 FERLVSALQNTVSNYATDIFTPLFKRIEEVTGARPYTDKYGADDVDGIDTAYRVIADHIR 304

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFP 414
            L+F+++DG+ P N+GR YV+RR+LRR VRY  +   A+ G FF+ ++  +V  MG+ FP
Sbjct: 305 LLTFSMSDGAVPNNDGRGYVVRRVLRRGVRYARKYFNAEIGSFFSKILPALVDQMGEQFP 364

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTYGF 471
           E+ +++  IREI+  EE +F +TL +G    EK+  AA     K LSG + + L+DT+GF
Sbjct: 365 EIVKKQDDIREILDEEEEAFARTLDRGEAQFEKYANAAIKKGEKKLSGAEVWRLYDTFGF 424

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR-GV 530
           P+DLT+LMAEER L +D +    A D+ARE S+  +N     A  ++    A L ++  V
Sbjct: 425 PVDLTKLMAEERKLEIDDDEVKAAQDKAREASKVVKNSVQTFA-KLNVHQIAELEQQLNV 483

Query: 531 LATDDSFKFIWFQDHKSVIKAIYTGSEFIES---VVPGNEVGIVLASSSFYAEQGGQIFD 587
             TDD  KF+   D K+ ++ IY G  F++S   +     +G++L  ++FYAE GGQ+ D
Sbjct: 484 ARTDDDAKFV-KGDSKAKVQLIYDGKGFVKSTKDIAENTPLGLLLDKTNFYAESGGQVAD 542

Query: 588 EG-FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
            G  +      F V +VQ +GG+++H G L  G    S G EVIC+ D  RR  I  NHT
Sbjct: 543 TGRIVIDDVAEFKVLDVQNHGGYIVHNGYLEYGV--LSSGNEVICEYDELRRSPIRNNHT 600

Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD 706
            TH+LN +LREVLGD V+QKGS+V  EKLRFDFSH   V    L++IE   N  I+    
Sbjct: 601 ATHILNHSLREVLGDDVNQKGSLVDNEKLRFDFSHKTGVTIPELKKIEDFSNSYIRQNGK 660

Query: 707 VFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGG 766
           +++KE  L  AK I G+RAVFGE YP+PVRVV++G  V+ LLA+P+N EW  IS E CGG
Sbjct: 661 IYAKEVDLDLAKGIEGVRAVFGETYPNPVRVVSVGVDVDTLLANPKNPEWRKISVEFCGG 720

Query: 767 THLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVD---------- 816
           TH+  T   +   ++ E GIAKGIRRI A T   A++    A    K +D          
Sbjct: 721 THVDQTGLIKDLVIVEESGIAKGIRRIIAYTGDAAHQVQREADEFSKRLDALEVLPFGPE 780

Query: 817 ----------DASKIEGSLLEKNQVRKAQKKV------AEENLQKA-VKVATETAEAAAS 859
                       +++  S L K  ++K   K+       ++  QKA  K A +T  A   
Sbjct: 781 KEQEIKTTQHALNQLTISTLTKEDIKKRFDKIIKAVTDEQKKRQKAEAKTALDTVVAHFD 840

Query: 860 NGK--PFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQ 917
             K   + + ++ +  +A A+ E V+K  + K     V+    + N+  V  GV   +  
Sbjct: 841 KNKDSKWFVGQLPISANAKAIGE-VVKHFQSKDKERSVYLFGGSKNEGSVAHGVYVGTHL 899

Query: 918 SKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           S Q   +E   A +  + G    GK     GQGT A  +  A+  A ++   KL
Sbjct: 900 SSQGVTAEQWAAQVSEIVGGKSGGKEPTRQGQGTKAENLDEAVATAEKWLKEKL 953


>gi|320588479|gb|EFX00948.1| alanyl-tRNA synthetase [Grosmannia clavigera kw1407]
          Length = 1117

 Score =  767 bits (1981), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 454/998 (45%), Positives = 604/998 (60%), Gaps = 55/998 (5%)

Query: 17   ARVLLNPSLTLAVTNHHHSLISRFSASAVAAMPGADPQVVEWPATKVRDTFFKFFEDKNH 76
            +R+ ++P+L  A+T   +  +    +S +A  P       +W   KVR TF ++FE K H
Sbjct: 129  SRIAVSPALCAALTFRRYPALFARPSSTMAESP-------KWTGLKVRQTFLEYFEKKGH 181

Query: 77   VNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHN 136
                SS VVP NDPTLLF NAGMNQ+KPIFLGT      LS L RA +TQKCIRAGGKHN
Sbjct: 182  TIVPSSSVVPHNDPTLLFTNAGMNQFKPIFLGTVAKADPLSSLKRAVDTQKCIRAGGKHN 241

Query: 137  DLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEK 196
            DLDDVGKD+YHHTFFEMLGNWSFGDYFK EAIE +W+LLT VY L   RLY TYF G+  
Sbjct: 242  DLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIEMSWDLLTNVYGLDPARLYVTYFEGNPA 301

Query: 197  AGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGPCSEIHYDRT-GNRDAAS 254
             GL PD EA+++WL   +P   +LP   KDNFWEMGD GPCGPCSE+HYD+  G R+A+S
Sbjct: 302  MGLEPDLEAKNLWLSVGVPEDHILPGNMKDNFWEMGDQGPCGPCSEVHYDKVGGGRNASS 361

Query: 255  LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDV 314
            LVN DDP  +E+WN VFIQF+R+ D SLK LPAKHVDTG+GFERL S LQ+K+SNY TD+
Sbjct: 362  LVNQDDPLVVEVWNNVFIQFDRQQDKSLKSLPAKHVDTGMGFERLVSALQDKISNYATDI 421

Query: 315  FMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREY 374
            F P+FD IQ+ TGARPY+ K G DD D +D AYRVVADHIR L+F++ADG+ P N+GR Y
Sbjct: 422  FTPLFDRIQEVTGARPYTDKYGKDDVDGIDTAYRVVADHIRLLTFSMADGAVPNNDGRGY 481

Query: 375  VLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEAS 433
            V+RR+LRR VRY  +   A+ G FF+ ++  +V  MG  FPE+ +++  I+EI+  EE +
Sbjct: 482  VVRRVLRRGVRYARKYFGAEIGSFFSQILPALVDQMGHQFPEIAKKQKDIKEILDEEEEA 541

Query: 434  FGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIE 490
            F +TL +G    EK+  A      K LSG D + L+DT+GFP DLTQLMAEERGL +D E
Sbjct: 542  FSRTLDRGERQFEKYAAATAKSGAKTLSGADVWRLYDTFGFPEDLTQLMAEERGLSIDAE 601

Query: 491  GFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQDHKSVIK 550
                A + ARE S+S +      A  ++    A L     +    S       D  S ++
Sbjct: 602  EVAVARERAREASKSVKEAVQTFA-KLNVHQIAELENEHKIVRPSSEAKYLRGDLHSRVE 660

Query: 551  AIYTGSEFIESV--VPGNE-VGIVLASSSFYAEQGGQIFDEG-FIEGLFGSFYVRNVQIY 606
             IYTG+ F+++   +P N  +GI++  ++FYAE GGQ+ D G  +      F V +VQ Y
Sbjct: 661  LIYTGTGFVKTTKDIPANTPLGILVDKTNFYAESGGQVADTGRIVIDDVAEFKVLDVQEY 720

Query: 607  GGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQK 666
            GG+V+H G L    G  S G+ VIC+ +  RR  I  NHT TH+LN ALREVLGD V+QK
Sbjct: 721  GGYVVHNGYLE--YGELSSGDNVICEYEELRRAPIRNNHTGTHVLNHALREVLGDDVNQK 778

Query: 667  GSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAV 726
            GS+V  +KLRFDFSH   V    +++IE + N  I+  L VF K+  LA A+ I G+RAV
Sbjct: 779  GSLVDQDKLRFDFSHKSAVSLAEIKKIEELANANIQRNLKVFYKDVDLASAREIEGVRAV 838

Query: 727  FGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGI 786
            FGE YPDPVRVV++G  V++LL  P+  EW   S E CGGTH+  T   +   ++ E GI
Sbjct: 839  FGETYPDPVRVVSVGVDVDELLRTPKKAEWRGYSVEFCGGTHVEQTGLIKDVVVVEESGI 898

Query: 787  AKGIRRITAVTTGLAYKAFEAACSLEKEVD--------------------DASKIEGSLL 826
            AKGIRRI A T   A++    A   ++ ++                    D +++  S L
Sbjct: 899  AKGIRRIVAYTGDAAHRVQREATQFQERIEAIEKLPFGPEKETEIKAAQHDLNQLAISAL 958

Query: 827  EKNQVR----KAQKKVAEENLQKAVKVATETAEAAASN--GKP------FCISRVEVGLD 874
             K ++R    K QK V +E L+K  K   + A  A ++   KP        +  + +  +
Sbjct: 959  AKEELRTRFAKVQKDVLDE-LKKRQKAELKAAVGAVTDHFAKPDNKESKVFVGHLPISAN 1017

Query: 875  AAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPL 934
            A A+ E V+   + K     V+    + ++ VV          SK +   +W TA    +
Sbjct: 1018 AKAISE-VMNHFKTKDKERSVYVFGGSPSEGVVHGVYVGTHLASKGVTAEQWSTAVSDVV 1076

Query: 935  KGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKLR 972
             G+ G GK     G GT   ++   +  A E+ A KL+
Sbjct: 1077 GGKAG-GKEPTRQGSGTKPEKLEDGVKRAEEWLAEKLK 1113


>gi|209877330|ref|XP_002140107.1| alanyl-tRNA synthetase family protein [Cryptosporidium muris RN66]
 gi|209555713|gb|EEA05758.1| alanyl-tRNA synthetase family protein [Cryptosporidium muris RN66]
          Length = 984

 Score =  767 bits (1980), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 432/955 (45%), Positives = 587/955 (61%), Gaps = 66/955 (6%)

Query: 48  MPGADPQVVEWPATKVRDTFFKFFEDK-NHVNWKSSPVVPVNDPTLLFANAGMNQYKPIF 106
           M  + P  ++W    VR  F  FF +K NH  ++S+ V+P+NDPTLLF NAGMNQ+K IF
Sbjct: 1   MCDSKPSKLKWTGKNVRQQFIDFFVNKANHKFYRSASVIPLNDPTLLFTNAGMNQFKSIF 60

Query: 107 LGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNE 166
             T +PN++LSKL R  N+QKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK E
Sbjct: 61  TETVEPNSELSKLVRVVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKEE 120

Query: 167 AIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAP-DNEARDIWLKFLPASRVLPFGCKD 225
           AI+WA+ELLTKVY +P++RLY TYFGGD+K    P D EARDIW+ +LP  R++    K+
Sbjct: 121 AIKWAFELLTKVYEIPSERLYVTYFGGDDKLPACPVDEEARDIWMNYLPKERIISCSAKE 180

Query: 226 NFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPL 285
           NFWEM D GPCGPCSEIH+DR G RDA+ LVN DDP+ IEIWN+VF+Q+ RE+DGSL  L
Sbjct: 181 NFWEMADVGPCGPCSEIHFDRIGGRDASHLVNKDDPSVIEIWNLVFMQYYRETDGSLVLL 240

Query: 286 PAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARP-YSGKVG-ADDADKV 343
           PAK VDTG+G ERL S+LQNK+SNYDTD+F+PIF+ I       P Y G VG  DD +K+
Sbjct: 241 PAKCVDTGMGLERLVSVLQNKLSNYDTDLFIPIFNQIHSIFPNIPQYKGMVGDKDDPNKI 300

Query: 344 DMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKA-QDG--FFNG 400
           DM+YRV+ADHIRTLS AI+DG  P NEGR YVLRRILRRAVRYG +   A  DG  +F  
Sbjct: 301 DMSYRVIADHIRTLSVAISDGCIPSNEGRGYVLRRILRRAVRYGRQYFNAGMDGNMWFYK 360

Query: 401 LVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFK-------KAAQDVQ 453
           LV+ V  ++GD +PE+ +++  I+  I  EE  F KTL KGIE+F        K++  + 
Sbjct: 361 LVDSVSNILGDYYPEIVEKKDTIKSAIFEEEKQFSKTLGKGIERFNRVTNKLLKSSSPIN 420

Query: 454 GK------VLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQ 507
            K      +    +AF L+ TYGFP+DLT+L+A E G+  D EGF   M+  +  S    
Sbjct: 421 SKLKNIRLIFPANEAFQLYSTYGFPMDLTELIASELGMEFDHEGFKKCMENHQLASEGKF 480

Query: 508 NKQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNE 567
           NK+    ++        L K G+  TDD +K+    +    + AIY G E I++    + 
Sbjct: 481 NKKLDKLVLKPDIQQHILLKYGLNLTDDIYKYNLNNECFGKLFAIYNGHELIDTATCFHG 540

Query: 568 -VGIVLASSSFYAEQGGQIFDEGFIE---GLFGSFYVRNVQIYGGFVIHIGSLTEGAGRF 623
            VG++   + +Y+E GGQ+ D G+IE       +F V + Q +G +V+HIG + EG  +F
Sbjct: 541 IVGLIFDKTCYYSESGGQVSDIGYIELWEDNLNNFQVIDCQKFGNYVLHIGVVLEG--KF 598

Query: 624 SVGEEVICK--VDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSH 681
           SVG+   C   +D DRR +   NHT TH+LN+ALR +LG+  DQ+GS+V P KLRFDFS 
Sbjct: 599 SVGDSN-CHFLIDKDRRVMTMRNHTATHLLNYALRLLLGEKCDQRGSIVEPTKLRFDFSA 657

Query: 682 GKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIG 741
            K ++   +++IE I+N+ IK + +VF     L  AK I+GLRA+FGE YPDPVRV+++G
Sbjct: 658 NKALNINEIQQIEDIINKIIKDKQEVFCDVVPLNIAKEISGLRAIFGEAYPDPVRVLSVG 717

Query: 742 ---RKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTT 798
               ++ D          +  S ELCGGTH+ NT +  +F +LSEEGIAKGIRRI AVT 
Sbjct: 718 IPVNELNDCNFGASKSLHIKTSVELCGGTHVLNTYDIGSFIILSEEGIAKGIRRIVAVTN 777

Query: 799 GLAYKAFEAACSLEKEVDDASKIEGS-----------LLEKNQV-----RKAQKKVAEEN 842
             A  A +    L  + +    I G            LL++ ++     RK   +  +  
Sbjct: 778 DTANVAEDNTLILTSKFEQLKNIFGKELGKEITKCRVLLDETRILPLIKRKYLSQFLDNQ 837

Query: 843 LQKAV---KVATETAEAAASNGKPFCISRVEVGLDAA--AVRE--------AVLKVIEQ- 888
            Q+ +   K+  +  ++AA       +S++   L+     VR           +++I Q 
Sbjct: 838 YQRVLDDAKLKQKERQSAAQKVAQDILSQLSKDLNIGNILVRNIQEVDGDIKCIEIISQY 897

Query: 889 --KGMPVMVFS--TDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCG 939
             K  P + F   T  + NK  + A       + K L+ ++WL + L+   G+CG
Sbjct: 898 IIKEFPKVSFMLLTSGSCNKNGISALAIVPQGEGKLLKANQWLHSTLEICGGKCG 952


>gi|346321718|gb|EGX91317.1| alanyl-tRNA synthetase [Cordyceps militaris CM01]
          Length = 956

 Score =  766 bits (1978), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 440/955 (46%), Positives = 591/955 (61%), Gaps = 46/955 (4%)

Query: 58  WPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLS 117
           WPA KVR TF  FFE + H    S  VVP NDPTLLF NAGMNQ+KPIFLGT      ++
Sbjct: 7   WPAAKVRQTFLDFFEKRGHTIVPSGSVVPHNDPTLLFTNAGMNQFKPIFLGTVGKTDPMA 66

Query: 118 KLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTK 177
            L RA +TQK IRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK EAIE AWELLTK
Sbjct: 67  NLKRAADTQKVIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIEMAWELLTK 126

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPC 236
           VY +  +RLY TYF G  + GL PD EA+++W    +P  R+LP   KDNFWEMGD GPC
Sbjct: 127 VYGIDPERLYVTYFEGSAELGLEPDLEAKELWHDLGVPYDRILPGDMKDNFWEMGDQGPC 186

Query: 237 GPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGF 296
           GPCSEIHYD+ G R+AASLVN DDP  +EIWN+VF+QF+R+ D SLK LPAKH+DTGLG+
Sbjct: 187 GPCSEIHYDKVGGRNAASLVNMDDPMVVEIWNLVFMQFDRQKDRSLKSLPAKHIDTGLGY 246

Query: 297 ERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRT 356
           ERL S LQN +SNY TD F P+F  I+  TG RPY+ K G DD D VD AYRVVADHIRT
Sbjct: 247 ERLVSALQNTISNYATDCFTPLFQHIESVTGVRPYTDKYGKDDIDGVDTAYRVVADHIRT 306

Query: 357 LSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFPE 415
           LSFAI DG+ P ++GR YV+RR+LRR VRY  + L A+ G FF+ ++  +V+ +G  FP+
Sbjct: 307 LSFAIIDGAVPNSDGRGYVVRRVLRRGVRYARKYLNAEIGSFFSKILPALVEQVGSQFPD 366

Query: 416 LKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV---QGKVLSGQDAFILWDTYGFP 472
           L +++  I+EI+  EE +F +TL +G  +F+K A        K L G   + L+DT+GFP
Sbjct: 367 LIKKQEDIKEILNEEEEAFSRTLDRGETQFEKYATKALKDNVKKLDGDVVWRLYDTFGFP 426

Query: 473 LDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLA 532
           +DLT+LMAEERGL +D      A D+ARE S++ ++  A     ++    A L ++  L 
Sbjct: 427 VDLTKLMAEERGLDIDEAEVEVAKDKAREASKAVKDASATFE-KLNVHLIAELEQQHKLP 485

Query: 533 -TDDSFKFIWFQDHKSVIKAIYTGSEFIES---VVPGNEVGIVLASSSFYAEQGGQIFDE 588
            TDD  KF+   D K  I+ I+ G  F +S   + P   VG++L  ++FYAE GGQI D 
Sbjct: 486 RTDDEGKFVK-GDSKGNIQIIFDGKTFHKSTKDLPPKTAVGLLLNKTNFYAESGGQIADT 544

Query: 589 G-FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTC 647
           G  I      F V +VQ +GG+V+H G +  GA   S G+EVIC+ D  RR  I  NH+ 
Sbjct: 545 GRIIIDDVAEFKVMDVQNFGGYVLHSGYIEYGA--LSSGDEVICEYDELRRSPIRNNHSG 602

Query: 648 THMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDV 707
           TH+LN ALREVLG+ ++QKGS+V  EKLRFDFSH   V  + L++IE + N  I+    V
Sbjct: 603 THVLNHALREVLGEDINQKGSLVDDEKLRFDFSHKAQVKIDELKKIEDLSNAYIRQNAKV 662

Query: 708 FSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGT 767
           ++K+  L  A+ I G+RAVFGE YP+PVRVV+IG  ++ +LA+P+  +W   S E CGGT
Sbjct: 663 YAKDVDLDLAREIEGVRAVFGETYPNPVRVVSIGMDIDTMLAEPKKADWRKYSVEFCGGT 722

Query: 768 HLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVD----------- 816
           H+ +T   +   ++ E GIAKGIRRI A T   A++    A    K +D           
Sbjct: 723 HVEHTGLLKDLLIVEESGIAKGIRRIIAYTGEAAHRIQREAVEFSKTLDALDALPFGPEK 782

Query: 817 ---------DASKIEGSLLEKNQVRKAQKKVA------EENLQKA-VKVATETAEAAASN 860
                    + SK+  S L K +  +   K++      ++  QKA  K A +T      +
Sbjct: 783 EAQVKTVSQELSKLVISTLTKEEFNQRFTKISTSVINEQKKKQKAESKTALDTVTKYFED 842

Query: 861 GK--PFCISRVEVGLDAAAVREAVLKV-IEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQ 917
            K   + + R+ +G +A A+ + V     ++K   + +F   E     V    + +   +
Sbjct: 843 NKEAKWFVGRLPIGANAKALGDVVKHFQSKEKEKTIYLFGGSEEAGGVVHSVYIGQHLAE 902

Query: 918 SKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKLR 972
            + +   +W  +    + GR G GK    +GQGT    +   ++ A ++ + KL+
Sbjct: 903 -QGVTAEQWAASVSDVIGGRSG-GKEPTRAGQGTKPESIDDGVEQATKWLSEKLK 955


>gi|367019996|ref|XP_003659283.1| hypothetical protein MYCTH_2296109 [Myceliophthora thermophila ATCC
           42464]
 gi|347006550|gb|AEO54038.1| hypothetical protein MYCTH_2296109 [Myceliophthora thermophila ATCC
           42464]
          Length = 933

 Score =  766 bits (1978), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 442/934 (47%), Positives = 590/934 (63%), Gaps = 49/934 (5%)

Query: 81  SSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDD 140
           SS VVP NDPTLLF NAGMNQ+KPIFLGT      L++L RA ++QKCIRAGGKHNDLDD
Sbjct: 3   SSSVVPHNDPTLLFTNAGMNQFKPIFLGTIGKTEPLAQLKRAVDSQKCIRAGGKHNDLDD 62

Query: 141 VGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLA 200
           VGKD+YHHTFFEMLGNWSFGDYFK EAI+W+WELLTKVY L   RLY TYF G+ +  L 
Sbjct: 63  VGKDSYHHTFFEMLGNWSFGDYFKKEAIQWSWELLTKVYGLDPARLYVTYFEGNPELNLE 122

Query: 201 PDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNND 259
           PD EA+ +WL   +P   +LP   KDNFWEMGD GPCGPCSEIHYD+ G R+AA LVN D
Sbjct: 123 PDLEAKQLWLDVGVPEDHILPGNMKDNFWEMGDQGPCGPCSEIHYDKVGGRNAAHLVNQD 182

Query: 260 DPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIF 319
           DP  +EIWN VF+QF+R+ D SLKPLPAKH+DTG+GFERL S LQNK SNY TD+F P+F
Sbjct: 183 DPLVVEIWNNVFMQFDRQKDKSLKPLPAKHIDTGMGFERLVSALQNKTSNYATDIFTPLF 242

Query: 320 DAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRI 379
             IQ+ TGARPY+ K G DDAD +D AYRVVADHIR L+FAIADG+ P N GR YV+RR+
Sbjct: 243 ARIQEVTGARPYADKYGKDDADGIDTAYRVVADHIRLLAFAIADGAVPNNIGRGYVVRRV 302

Query: 380 LRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTL 438
           LRR VRY  +   A+ G FF+ ++  +V+ MG+ FPELK+++A I+EI+  EE +F  TL
Sbjct: 303 LRRGVRYARKYFNAEIGSFFSSVLPALVEQMGEQFPELKKKQADIKEILDEEEVAFAVTL 362

Query: 439 LKGIEKFKK-AAQDVQG--KVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNA 495
            +G ++F+K AA  V+     LSG D + L+DT+GFP DLT+LMAEERGL +D      A
Sbjct: 363 DRGEKQFEKYAALAVKSGENKLSGADVWRLYDTFGFPEDLTKLMAEERGLTIDEAEVEVA 422

Query: 496 MDEARERSRSAQNKQAGGAI-VMDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYT 554
            ++ARE S++   K+A      ++    A L     L   +S       D K  ++ I+T
Sbjct: 423 REKAREASKAV--KEAVTTFPKLNVHQIAELENTINLPRPNSEAKYEKGDTKGKVQLIFT 480

Query: 555 GSEFIES---VVPGNEVGIVLASSSFYAEQGGQIFDEG--FIEGLFGSFYVRNVQIYGGF 609
           G+EF ++   + P   +G++L  ++FYAE GGQ+ D G   I+G+   F V +VQ YGG+
Sbjct: 481 GTEFRKTSKELPPKTPLGLLLDRTNFYAESGGQVADTGRIIIDGV-AEFKVLDVQEYGGY 539

Query: 610 VIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSV 669
           V+H G L    G  + G+EVIC+ D  RR+ I  NHT TH+LN ALREVLGD V QKGS+
Sbjct: 540 VVHNGYLE--YGELTAGDEVICEYDELRRQPIRNNHTGTHILNHALREVLGDEVHQKGSL 597

Query: 670 VLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGE 729
           V  +KLRFDFSH   V  E +++IE + NE I+ +L  ++K+  L  A+ I G+RAVFGE
Sbjct: 598 VDQDKLRFDFSHKSQVTLEEIKKIEEMSNEDIRKDLKTYAKDVDLDLARQIEGVRAVFGE 657

Query: 730 VYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKG 789
            YP+PVRVV+IG  V++LL +P+N EW   S E CGGTH+  T   +   ++ E GIAKG
Sbjct: 658 TYPNPVRVVSIGVDVDELLKNPKNPEWRKYSVEFCGGTHVEATGLIKDLIIVEESGIAKG 717

Query: 790 IRRITAVTTGLAYKAFEAACSLEKEVDDASKIEG--------------------SLLEKN 829
           IRRI A T   A++A   A +  +++D    +E                     S L K 
Sbjct: 718 IRRIVAYTGDGAHQAQRDAKTFAEKLDHIEALEFGPQKAAEIKAAAVELDALAISALTKE 777

Query: 830 QVR----KAQKKVAEEN--LQKA-VKVATETAEA----AASNGKPFCISRVEVGLDAAAV 878
           Q+R    K QK+V +E    QKA  K A +T +       +    + +  + +  +A A+
Sbjct: 778 QLRQRFAKIQKEVVDEQKKRQKAESKTALDTVQGHFKKEENKDAKYFVGHLPISANAKAI 837

Query: 879 REAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRC 938
            + V+   + K     V+    + + AV+          SK +   +W  A  + + G+ 
Sbjct: 838 AD-VMTYYKSKDKERTVYVFAGSKDDAVMHGVYVGTYLSSKGITAEQWTAAVTEVIGGKT 896

Query: 939 GKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKLR 972
           G GK     G G + A++  A+  A ++   K++
Sbjct: 897 G-GKEPSRQGAGAEPAKLDEAVAKAEQWLVEKMK 929


>gi|402086087|gb|EJT80985.1| alanyl-tRNA synthetase [Gaeumannomyces graminis var. tritici
            R3-111a-1]
          Length = 1085

 Score =  766 bits (1978), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 447/959 (46%), Positives = 597/959 (62%), Gaps = 49/959 (5%)

Query: 57   EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
            +W A  VR TF  FF+++ H    S  VVP NDPTLLF NAGMNQ+KP+FLGT      +
Sbjct: 129  KWSAAAVRTTFLDFFQERGHTVVPSGSVVPHNDPTLLFTNAGMNQFKPVFLGTVGKTDPM 188

Query: 117  SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
            + L RA +TQKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK EAI  AWELLT
Sbjct: 189  ASLKRAVDTQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIAMAWELLT 248

Query: 177  KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
            KVY L A RLY TYF G+  AGL PD EA+++WL   +P   +LP   KDNFWEMGD GP
Sbjct: 249  KVYGLDATRLYVTYFEGNPAAGLEPDLEAKNLWLAAGVPEDHILPGNMKDNFWEMGDQGP 308

Query: 236  CGPCSEIHYDRT-GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
            CGPCSEIHYD+  G R+AA LVN DDP  +E+WNIVFIQF+R+ D SLK LPAKH+DTG+
Sbjct: 309  CGPCSEIHYDKIGGGRNAAHLVNQDDPLVVEVWNIVFIQFDRQQDRSLKSLPAKHIDTGM 368

Query: 295  GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
            GFERL + LQ+K SNY TDVF P+F  IQ+ TGAR Y+ K G +D D +D AYRVVADHI
Sbjct: 369  GFERLVAALQDKTSNYGTDVFAPLFARIQEVTGARSYTDKYGKEDVDGIDTAYRVVADHI 428

Query: 355  RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQ-DGFFNGLVNIVVKVMGDVF 413
            R ++F+IADG+ P NEGR YV+RR+LRR VRY  +   A+  GFF+ ++  +V+ +G  F
Sbjct: 429  RLMAFSIADGAVPYNEGRGYVVRRVLRRGVRYARKYFNAEIGGFFSQILPTLVEQLGSGF 488

Query: 414  PELKQREAHIREIIAAEEASFGKTLLKGIEKFKK-AAQDVQG--KVLSGQDAFILWDTYG 470
            PEL +++  I+EI+  EE +F +TL +G ++F+K AA  ++     LSG D + L+DT+G
Sbjct: 489  PELVRKQQDIQEILDEEEEAFARTLDRGEKQFEKYAAMTIKAGESKLSGSDVWRLYDTFG 548

Query: 471  FPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGV 530
            FP DLT+LMAEERG+ +D    + A ++ARE S+S +      A  +D    + L K   
Sbjct: 549  FPEDLTKLMAEERGITIDEAEVSVAREKAREASKSIKEAVQTFA-KLDVHRISELEKELK 607

Query: 531  LATDDSFKFIWFQDHKSVIKAIYTGSEFIES---VVPGNEVGIVLASSSFYAEQGGQIFD 587
            +   DS       +  + +  ++TG +FI+S   + P   +G++L  ++FYAE GGQ+ D
Sbjct: 608  VPRPDSELKFSKDEITAKVMLLFTGKDFIKSSKELPPKTPLGLLLDRTNFYAESGGQVAD 667

Query: 588  EG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
             G   I+G+   F V +VQ YGG+V+H G L    G  + G+ V+C+ D  RR  I  NH
Sbjct: 668  TGRIIIDGV-AEFNVLDVQEYGGYVLHNGYLE--FGELTAGDAVLCEYDERRRLPIRNNH 724

Query: 646  TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
            T TH+LN +LREVLGD ++QKGS+V  EKLRFDFSH   V    LRRIE + N  I+   
Sbjct: 725  TGTHILNHSLREVLGDEINQKGSLVDEEKLRFDFSHKVAVTLPELRRIEDLANSYIRQNC 784

Query: 706  DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
              ++KE +L  A+ I G+RAVFGE YPDPVRVV++G +V+ LL +P+N EW  +S E CG
Sbjct: 785  KTYAKEVSLDLARQIEGVRAVFGETYPDPVRVVSVGIEVDMLLENPKNPEWRKVSVEFCG 844

Query: 766  GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSL-------------- 811
            GTH+  T   +   ++ E GIAKGIRRI A T   A++A   A                 
Sbjct: 845  GTHVEQTGVIKDMIIVEESGIAKGIRRIVAYTGDAAHQAQRDAVKFSERITELEKLPLGP 904

Query: 812  EKEV------DDASKIEGSLLEKNQVR----KAQKKVAEE--NLQKA-VKVATETAEAAA 858
            EKE        D  K+  S L K+++R    K QK V EE    QKA  K A +T  A  
Sbjct: 905  EKEAAIKSTQQDLDKLVVSTLTKDELRSRFGKTQKDVTEELKKRQKAESKKALDTVAAYF 964

Query: 859  SN----GKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEK 914
             N    G    +  + +  ++ A+ + V+   + K     V+      ++  V  GV   
Sbjct: 965  KNPENAGSNTFVGHLPISANSKALAD-VVNHFKSKDKEKSVYVFGGGADEGAVVHGVYVG 1023

Query: 915  SD-QSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKLR 972
            +   SK +   +W +A    + G+ G GK     GQGT   ++  A+  A ++ + KL+
Sbjct: 1024 TALSSKGVTAEQWASAVCGVIGGKSG-GKEPTRQGQGTAPEKLQDAVKEAEKYLSGKLK 1081


>gi|324507432|gb|ADY43152.1| Alanyl-tRNA synthetase [Ascaris suum]
          Length = 693

 Score =  764 bits (1974), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/692 (55%), Positives = 479/692 (69%), Gaps = 24/692 (3%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A +VR  F  FF ++ H    SS V+P  DPTLLFANAGMNQ+KPIFLGT DP+++L +L
Sbjct: 7   ANEVRSAFINFFANREHTYVHSSSVIPFEDPTLLFANAGMNQFKPIFLGTVDPSSELGRL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFGDYFK E   WAWELLTK  
Sbjct: 67  RRAVNTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKEVCNWAWELLTKEL 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +PAD+LY +YFGGDEKAGLAPD+E R IWL   LP SRVLPFG KDNFWEMGD GPCGP
Sbjct: 127 GIPADQLYVSYFGGDEKAGLAPDDECRQIWLDIGLPESRVLPFGMKDNFWEMGDVGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIH+DR GNRDA++LVN DDP  +EIWN+VF+Q+NRE  G L+ LP +H+D GLG ER
Sbjct: 187 CSEIHFDRVGNRDASALVNADDPMVVEIWNLVFMQYNREEGGVLRELPMRHIDCGLGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L +++QNK SNYDTD F PIFDAIQ +   R YSGKVGA D+D +DMAYRVV+DHIRTL 
Sbjct: 247 LVAVMQNKTSNYDTDAFTPIFDAIQASVCVRAYSGKVGAADSDGIDMAYRVVSDHIRTLC 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A++DG  P + GR YVLRRILRR VRY +E L A  GFF  LV +VV+++GD FPEL++
Sbjct: 307 VALSDGGRPDSTGRGYVLRRILRRGVRYANEKLGAPPGFFASLVPVVVRLLGDTFPELRK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKK--AAQDVQGKVLSGQDAFILWDTYGFPLDLT 476
               + +II  EEA F KTL +G   F+K  AA + + K   G  A+ L+DTYGFP+DLT
Sbjct: 367 DPETVMDIINDEEAQFLKTLSRGRSLFQKAVAALESEAKQFPGDIAWRLYDTYGFPVDLT 426

Query: 477 QLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDS 536
           QLMAEE+ L VD++ F     +A E S +  NK    A  +D    A L K GV +TDDS
Sbjct: 427 QLMAEEKQLSVDMDAFEQCRQKAVEMSSAGANKFRDTA-ELDVHGIAKLKKDGVPSTDDS 485

Query: 537 FKFIW-------------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGG 583
            K+ +             F   +  + A+     F++S+  G++  ++L  ++FYAEQGG
Sbjct: 486 PKYDYSAVGPNDITAKYSFAKCEGQVLALLKEGTFVDSLYSGDKGAVILDRTNFYAEQGG 545

Query: 584 QIFDEGFIEGL---FGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           QI+D G +  +      F V NVQ+ GG+V+ +GS+    G  S+G+ ++  +D +RR L
Sbjct: 546 QIYDTGVLTKIGDEGAEFEVSNVQMRGGYVVLVGSVE---GNISIGDRLLQAIDEERRSL 602

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           I  NHT TH+LNFALR VLGD V+QKGS+V P+K+RFDFS    +    +R  E +    
Sbjct: 603 IMKNHTGTHVLNFALRRVLGD-VEQKGSLVAPDKMRFDFSAKHALTSAQVREAEELAQGM 661

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYP 732
           I+    VF+K+A LAEA+ + GLRAVF E  P
Sbjct: 662 IETHAAVFAKDAPLAEAREVKGLRAVFDEASP 693


>gi|400603042|gb|EJP70640.1| tRNA synthetase class II [Beauveria bassiana ARSEF 2860]
          Length = 1052

 Score =  764 bits (1972), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 443/965 (45%), Positives = 594/965 (61%), Gaps = 61/965 (6%)

Query: 56   VEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQ 115
             +WPA KVR+TF  FFE + H    S  VVP NDPTLLF NAGMNQ+KPIFLGT      
Sbjct: 100  TKWPAAKVRETFLDFFEKRGHTIVPSGSVVPHNDPTLLFTNAGMNQFKPIFLGTVGKTDP 159

Query: 116  LSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELL 175
            ++ + RA +TQK IRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK EAIE AWELL
Sbjct: 160  MANMKRAVDTQKVIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIEMAWELL 219

Query: 176  TKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTG 234
            TKVY L  +RLY TYF G  + GL PD EA+++W    +P  R+LP   KDNFWEMGD G
Sbjct: 220  TKVYGLDPERLYVTYFEGSSELGLDPDLEAKELWHALGVPYERILPGDMKDNFWEMGDQG 279

Query: 235  PCGPCSEIHYDRT-GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTG 293
            PCGPCSEIHYD+  G R+AASLVN DDP  +EIWN+VF+QF+R+ D SLK LPAKH+DTG
Sbjct: 280  PCGPCSEIHYDKVGGGRNAASLVNMDDPMVVEIWNLVFMQFDRQKDRSLKSLPAKHIDTG 339

Query: 294  LGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADH 353
            +G+ERL S LQ+ +SNY TD F P+F  I+  TG RPY+ K G DD D +D AYRV+ADH
Sbjct: 340  MGYERLVSALQHTISNYATDCFTPLFKQIETVTGVRPYTDKYGKDDVDGIDTAYRVIADH 399

Query: 354  IRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDV 412
            IRTLSFAI DG+ P ++GR YV+RR+LRR VRY  + L A+ G FF+ ++  +V+ +G  
Sbjct: 400  IRTLSFAITDGAVPNSDGRGYVVRRVLRRGVRYARKYLNAEVGSFFSKILPALVEQVGGQ 459

Query: 413  FPELKQREAHIREIIAAEEASFGKTLLKGIEKFK----KAAQDVQGKVLSGQDAFILWDT 468
            FP+L +++  I+EI+  EE +F +TL +G  +F+    KAA+D   K L G   + L+DT
Sbjct: 460  FPDLVKKQEDIKEILDEEEEAFSRTLDRGEAQFEKYAAKAAKD-NVKKLDGDVVWRLYDT 518

Query: 469  YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
            +GFP+DLT+LMAEERGL +D      A ++ARE S++ ++  A  A  ++    A L ++
Sbjct: 519  FGFPVDLTKLMAEERGLEIDEAEVEVAKEKAREASKAVKDAAATFA-KLNVHQIAELEQQ 577

Query: 529  GVLA-TDDSFKFIWFQDHKSVIKAIYTGSEFIES---VVPGNEVGIVLASSSFYAEQGGQ 584
              L  T+D  KF+   D K  I+ I+ G  F +S   + P   +G++L  ++FYAE GGQ
Sbjct: 578  HKLPRTNDESKFVK-GDSKGKIQIIFDGQTFHKSTKDLPPKTAIGLLLDQTNFYAESGGQ 636

Query: 585  IFDEG-FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAP 643
            I D G  +      F V +VQ +GG+V+H G +  GA   S G+EVIC+ D  RR  I  
Sbjct: 637  IADTGRIVIDDVAEFKVMDVQNFGGYVLHSGYIEYGA--LSSGDEVICEYDELRRSPIRN 694

Query: 644  NHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKA 703
            NH+ TH+LN ALREVLGD ++QKGS+V  EKLRFDFSH   V  + L++IE + N  I+ 
Sbjct: 695  NHSGTHILNHALREVLGDDINQKGSLVDDEKLRFDFSHKAQVKLDELKKIEDLSNAYIRK 754

Query: 704  ELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAEL 763
               VFSK+  L  A+ I G+RAVFGE YP+PVRVV+IG  ++ +LA+P+  +W   S E 
Sbjct: 755  SCKVFSKDVDLDLAREIEGVRAVFGETYPNPVRVVSIGMDIDTMLAEPKKADWRKYSVEF 814

Query: 764  CGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVD------- 816
            CGGTH+  T   +   ++ E GIAKGIRRI A T   A++    A    K +D       
Sbjct: 815  CGGTHVEQTGLIKDLLIVEESGIAKGIRRIIAYTGEAAHRIQREAAEFSKTLDALDALPF 874

Query: 817  -------------DASKIEGSLLEK---------------NQVRKAQKKVAEENLQKAVK 848
                         + SK+  S L K               N+ +K QK  ++  L    K
Sbjct: 875  GPEKEAQVKTVSQELSKLVISTLTKEELNQRFAKISTAVINEQKKKQKAESKTALDTVTK 934

Query: 849  VATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVC 908
               E  EA       + + R+ +G +A A+ + V+K  + K     V+    +     V 
Sbjct: 935  YFEENKEAK------WFVGRLPIGANAKALGD-VVKHFQSKDKDKTVYLFGGSEEAGGVV 987

Query: 909  AGVPEKSDQSKQLEVSE-WLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFA 967
             GV      + Q   +E W  +  + + GR G GK    +GQGT    +   ++ A ++ 
Sbjct: 988  HGVYIGQHLASQGVTAESWAASVSEVIGGRSG-GKEPTRAGQGTKPESIDEGVEQATKWL 1046

Query: 968  AMKLR 972
            + KL+
Sbjct: 1047 SEKLK 1051


>gi|383766272|ref|YP_005445253.1| alanyl-tRNA synthetase [Phycisphaera mikurensis NBRC 102666]
 gi|381386540|dbj|BAM03356.1| alanyl-tRNA synthetase [Phycisphaera mikurensis NBRC 102666]
          Length = 949

 Score =  764 bits (1972), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 447/966 (46%), Positives = 577/966 (59%), Gaps = 82/966 (8%)

Query: 60  ATKVRDTFFKFFEDKN-HVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSK 118
           A  VR  F  FF  K+ H    S+PVVP  DPTLLFANAGMN +KP FLG      +++ 
Sbjct: 6   AKDVRQQFLDFFAQKHGHKVVPSAPVVPHGDPTLLFANAGMNPFKPYFLGE-----EVAT 60

Query: 119 LTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKV 178
             R C+TQKCIRAGGKHNDL+DVG+DTYHHTFFEMLGNWSFGDYFK EAI WAWELL  V
Sbjct: 61  DKRVCDTQKCIRAGGKHNDLEDVGRDTYHHTFFEMLGNWSFGDYFKKEAIRWAWELLVDV 120

Query: 179 YRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGP 238
           + L  +RL+ATYF GDE  GL PD EARD+WL+ LPA RV P   KDNFWEMGDTGPCGP
Sbjct: 121 WGLEPERLHATYFEGDEAEGLEPDLEARDLWLQLLPAERVHPGNKKDNFWEMGDTGPCGP 180

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSE+HYD T +   A+ VN DDP  IEIWN+VFIQFNR + G L+PLPAKHVDTG+GFER
Sbjct: 181 CSELHYDGTADLSGAAKVNADDPDVIEIWNLVFIQFNRSTTGKLEPLPAKHVDTGMGFER 240

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           +  +LQ   SNYDTDVF P+F+AI++ATGA PY+G++   +    D+AYRV+ADHIRTL 
Sbjct: 241 IVRVLQGHSSNYDTDVFTPLFEAIREATGAGPYTGELEKPE----DVAYRVIADHIRTLV 296

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
           FA+ADG+    +GR YVLRRILRRAVRYG + L  +  FF  LV  VV   GD FPEL++
Sbjct: 297 FALADGAHCDKDGRGYVLRRILRRAVRYGRQTLGQEQPFFFELVPAVVANFGDAFPELRE 356

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ-------GKVLSGQDAFILWDTYGF 471
           R   +   I  EE SF KTL +GI+ F+ +A+ V+       GK ++  DAF L DTYGF
Sbjct: 357 RADAVAAEIREEEESFSKTLGRGIQLFELSARRVEEAAGRGGGKTIAATDAFQLHDTYGF 416

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIV---------MDADAT 522
           PLDLT+LMA ERG+ VD EGF+  M EAR RSR   +     A+           DA   
Sbjct: 417 PLDLTELMAAERGMTVDAEGFDRLMGEARVRSRGGGDGGEAAAMASLREEVQRGFDAGWY 476

Query: 523 AALHKRGVLATDDSFK------FIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSS 576
           A  +  G    +  F+      F    DH   + A        ES   G+ V IVL  S 
Sbjct: 477 AGTNFTGFETAEAPFQQNQIHVFRRQDDHWLSLTA-------GESATAGDAVAIVLKMSP 529

Query: 577 FYAEQGGQIFDEGFIE-GLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVI--CKV 633
           FYAE GGQ+ D G I+    G   VR+ Q  G   +H+G +   +G  +   +VI    V
Sbjct: 530 FYAEMGGQVGDTGSIQLRTGGRVAVRDTQKVGAVHVHLGEVV--SGEVATDPDVILAVAV 587

Query: 634 DYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRI 693
           D +RR+ I  NHT TH+LN +LR+ + D V Q+GS+V  E+LRFDF+HG  +  + L  I
Sbjct: 588 DLERRRAIEANHTATHLLNRSLRDRVSDDVQQRGSLVEAERLRFDFNHGAALGDDELAAI 647

Query: 694 ESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPEN 753
           E  +   I A   VFS  A  A+A+ I GLRAVFGE YP  VRVV++G  V+ LLADP+N
Sbjct: 648 EGDLAAAIAARRGVFSGNAPEAQARGIRGLRAVFGEKYPPVVRVVSVGEPVDKLLADPDN 707

Query: 754 KEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVT----------TGLAYK 803
             W  +S ELCGGTH  NT +  AFAL+ +E + KG+RR+TAVT               K
Sbjct: 708 AAWEELSVELCGGTHAGNTADLGAFALVGQEAVGKGVRRVTAVTGEPAVAAREEAARLMK 767

Query: 804 AFEAACSLEKEVDDAS------KIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAA 857
             +AA  L+ E   A       ++E + L   +    + K+A   L +AV+   + A A 
Sbjct: 768 KLDAAAGLDPEAVAAQLDGLTKRVEAATLPLAERAATRAKLA--TLGEAVRKHRKEAGAQ 825

Query: 858 ASNG--------------KPFCISRVEVGLDAAAVREAVLKVIEQKGM-PVMVFSTDETT 902
           A++                   ++ ++ G D  ++R A+  V + +   P M+ +T++  
Sbjct: 826 ATDAVLDAARAAAEGVADGAVLVTGID-GADGKSLRVAMDVVNKLRPQSPAMLAATED-- 882

Query: 903 NKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDL 962
            K  + A VP+   Q+   +  EW+ AA   + GR G GK   A   G D A++  A+D 
Sbjct: 883 GKVSLIASVPKDKVQAG-WKAGEWVNAAAAEVGGRGG-GKPDRAQAGGKDPAKLPAALDA 940

Query: 963 AAEFAA 968
           A  + A
Sbjct: 941 ARAWTA 946


>gi|225560127|gb|EEH08409.1| alanyl-tRNA synthetase [Ajellomyces capsulatus G186AR]
          Length = 1029

 Score =  763 bits (1971), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 431/980 (43%), Positives = 590/980 (60%), Gaps = 79/980 (8%)

Query: 32   HHHSLI-SRFSASAVAAMPGADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDP 90
            HHH L  S F  ++V  +     +  EWPA +VR+ F  FF++  H    SS VVP++DP
Sbjct: 79   HHHRLAHSAFKMASVQTV-----EQPEWPALRVRNAFLDFFKENGHTFVPSSSVVPLSDP 133

Query: 91   TLLFANAGMNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTF 150
            TLLF NAGMNQYK IFLGT DPN+  + L RA N+QK                     TF
Sbjct: 134  TLLFTNAGMNQYKSIFLGTVDPNSDFATLRRAHNSQK---------------------TF 172

Query: 151  FEMLGNWSFGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWL 210
            FEMLGNWSFGDYFK EAI ++W+LLTKVY L  DRLY TYF G+  AG+ PD EA+++WL
Sbjct: 173  FEMLGNWSFGDYFKKEAIRYSWDLLTKVYGLNPDRLYVTYFEGNPDAGIGPDLEAKELWL 232

Query: 211  KF-LPASRVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNI 269
               +    +L    KDNFWEMG+ GPCGPCSEIHYDR G R+A+ LVN DDP  +EIWN 
Sbjct: 233  SVGVAEDHLLSGNMKDNFWEMGEQGPCGPCSEIHYDRIGGRNASHLVNQDDPNVLEIWNN 292

Query: 270  VFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGAR 329
            VFIQ+NRE D SL+PLP KHVDTG+G+ERL SILQNK SNYDTDVF P+F+ I + TG R
Sbjct: 293  VFIQYNREPDKSLRPLPNKHVDTGMGYERLVSILQNKSSNYDTDVFTPLFEKISEITGCR 352

Query: 330  PYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSE 389
            PY+GK   +D D +D AYRVVADH+RTL+FAI+DG+ P NEGR YV+RR+LRR  RY  +
Sbjct: 353  PYTGKFHEEDTDGIDTAYRVVADHVRTLTFAISDGASPNNEGRGYVVRRVLRRGARYARK 412

Query: 390  VLKAQ-DGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKA 448
             L  +  GFF+ +V  +V  MGD+FPE+++++  + EI+  EE SF KTL +G   F++ 
Sbjct: 413  YLNVEIGGFFSKIVPTLVDQMGDMFPEIRRKQTDVMEILDEEEISFAKTLDRGERLFEEY 472

Query: 449  AQDVQGK---VLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRS 505
            A   + K    L G D + L+DT+GFP+DLT+LMAEERGL +D   F  A  +A+E S+ 
Sbjct: 473  ALQAKQKGFGKLHGADVWRLYDTFGFPVDLTRLMAEERGLTIDNAEFEEARLKAKEASK- 531

Query: 506  AQNKQAGGAIVMDADATAALHKR-GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESV-- 562
             Q K+    + +       L     V  T+D  KF    +  S IKAIY   +F++S   
Sbjct: 532  GQGKRTADVVKLTVHDLGLLETMDDVPKTNDDAKF-GRGNITSQIKAIYYNKKFVDSTKD 590

Query: 563  VP-GNEVGIVLASSSFYAEQGGQIFDEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEG 619
            +P G + GI+L  ++FYAEQGGQ  D G   I+G      V +VQ+YGG+++H G +  G
Sbjct: 591  IPQGEQFGIILDRTNFYAEQGGQENDTGKIIIDGK-AELAVEDVQVYGGYILHTGFMKYG 649

Query: 620  AGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDF 679
            +  F+V + VI + D  RR  I  NHT TH+LNFALR+VLGD ++QKGS+V  EKLRFDF
Sbjct: 650  S--FNVNDSVIAEYDELRRWPIRNNHTGTHILNFALRQVLGDGIEQKGSLVAAEKLRFDF 707

Query: 680  SHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVA 739
            SH   V    L +IE I  + I+    V++K+  LA A+ I+G+RAVFGE YPDPVRVV+
Sbjct: 708  SHKSAVSDSDLEKIERISTDYIRQNCAVYAKDVPLAIARGISGVRAVFGETYPDPVRVVS 767

Query: 740  IGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTG 799
            +G ++E++L +  +  W  IS E CGGTH+  T + +   +L E GIAKGIRRI AVT  
Sbjct: 768  VGVELEEILQNVHDPRWKDISIEFCGGTHVQKTGDIKDLVILEESGIAKGIRRIIAVTGE 827

Query: 800  LAYKAFEAACSL--------------EKEVD------DASKIEGSLLEKNQVR------- 832
             A++    A                 +KE++      D +++  S +EK + R       
Sbjct: 828  EAHEVQRIAKEFGERLRRFEKMELGPQKEIEAKLLQVDLNQLSISAVEKARFREQFAQIH 887

Query: 833  ----KAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKV-IE 887
                + QK   +   +KA+   T   EA  +      + ++ +  +  A+ +++  V  +
Sbjct: 888  KKVLEGQKAAQKLESKKALDAITGYFEAPENKVASHLVMQLPISANPKALSDSLNFVKTK 947

Query: 888  QKGMPVMVFSTDETTNKAVV-CAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLA 946
             +   V +F+ D+   K V  C      S+Q      ++W       + GR G GK  ++
Sbjct: 948  MQDKSVYMFAADKEAGKVVHGCHVAQALSEQGAT--PNDWANTVSSIVGGRAG-GKAPIS 1004

Query: 947  SGQGTDAAQVTPAMDLAAEF 966
             G GT+A ++  A+  A E+
Sbjct: 1005 IGNGTEAEKLDEAIKAATEY 1024


>gi|429849495|gb|ELA24879.1| alanyl-trna synthetase [Colletotrichum gloeosporioides Nara gc5]
          Length = 955

 Score =  762 bits (1968), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 445/955 (46%), Positives = 595/955 (62%), Gaps = 46/955 (4%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           +WP   VR TFF FFE + H    SS VVP NDPTLLF NAGMNQ+KPIFLGT      +
Sbjct: 5   QWPGAVVRKTFFDFFERRGHTIVPSSSVVPHNDPTLLFTNAGMNQFKPIFLGTISKADPM 64

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
             L RA ++QKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK EAIE +WELLT
Sbjct: 65  YTLKRAADSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIEMSWELLT 124

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
           KVY L   RLY TYF G+   GL PD EA+++WL   +P   +LP   KDNFWEMGD GP
Sbjct: 125 KVYGLDPARLYVTYFEGNPAMGLEPDLEAKNLWLSVGVPEDHILPGNMKDNFWEMGDQGP 184

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPCSEIHYD+ G R+AASLVN DDP  +E+WN VFIQF+R++D SLK LPAKHVDTG+G
Sbjct: 185 CGPCSEIHYDKIGGRNAASLVNMDDPMVVEVWNNVFIQFDRQADKSLKSLPAKHVDTGMG 244

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
           FERL S LQN +SNY TD+F P+F  I++ TGARPY+ K GADD D +D AYRV+ADHIR
Sbjct: 245 FERLVSALQNTVSNYATDIFTPLFKRIEEVTGARPYTDKYGADDIDGIDTAYRVIADHIR 304

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFP 414
            L+F+++DG+ P N+GR YV+RR+LRR VRY  +   A+ G FF+ ++  +V+ MG+ FP
Sbjct: 305 LLTFSMSDGAVPNNDGRGYVVRRVLRRGVRYARKYFNAEIGSFFSKILPALVEQMGEQFP 364

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTYGF 471
           E+ +++  I+EI+  EE +F +TL +G    EK+ K A     K LSG   + L+DT+GF
Sbjct: 365 EIVKKQQDIKEILDEEEEAFARTLDRGEAQFEKYAKEALKKGEKKLSGAVVWRLYDTFGF 424

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR-GV 530
           P+DLT+LMAEER L +D +    A ++ARE S+  ++     A  ++    A L K   V
Sbjct: 425 PVDLTKLMAEERQLEIDEDEVKEAQEKAREASKVVKSAVQTFA-KLNVHQIAELEKELNV 483

Query: 531 LATDDSFKFIWFQDHKSVIKAIYTGSEFIES---VVPGNEVGIVLASSSFYAEQGGQIFD 587
             TDD  KF    D KS ++ IY G  F++S   +     +G++L  ++FYAE GGQ+ D
Sbjct: 484 ARTDDEAKF-GKGDAKSKVQVIYDGKGFVKSTKDLAEKTPLGLLLDKTNFYAESGGQVAD 542

Query: 588 EG-FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
            G  +      F V +VQ +GG+++H G L  GA   S G+EVIC+ D  RR  I  NHT
Sbjct: 543 TGRIVIDDVAEFKVLDVQNFGGYIVHNGYLEYGA--LSSGDEVICEYDELRRSPIRNNHT 600

Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD 706
            TH+LN +LREVLGD ++QKGS+V  EKLRFDFSH   V    L++IE   N  IK    
Sbjct: 601 GTHVLNHSLREVLGDDINQKGSLVDNEKLRFDFSHKTGVTIPELKKIEEFSNTYIKQNGK 660

Query: 707 VFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGG 766
           V++KE  L  A+ I G+RAVFGE YP+PVRVV++G  V+ +LA+P+N EW   S E CGG
Sbjct: 661 VYAKEVDLDLARGIEGVRAVFGETYPNPVRVVSVGVDVDTMLANPKNPEWRKYSVEFCGG 720

Query: 767 THLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVD---------- 816
           TH+ +T   +   ++ E GIAKGIRRI A T   A++    A    K++D          
Sbjct: 721 THVESTGLIKDLVIVEESGIAKGIRRIIAYTGDAAHQVQREAVEFSKKLDALEALPFGPG 780

Query: 817 ----------DASKIEGSLLEKNQVRKAQKKVA------EENLQKA-VKVATETAEAAAS 859
                       +++  S L K  ++K  +K+       ++  QKA  K A +T      
Sbjct: 781 KEQEIKTTQHALNQLTISTLTKEDIKKRFEKIVKAVTDEQKKRQKAEAKTALDTVVGHFD 840

Query: 860 NGK--PFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQ 917
             K   + + ++ +  +A A+ E V+K  + K     V+    + ++  V  GV   +  
Sbjct: 841 KNKDSKWFVGQLPISANAKAIGE-VVKHFQSKDKERSVYLFGGSKDEGAVAHGVYVGTHL 899

Query: 918 SKQ-LEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           S Q +   +W T     + G+ G GK  +  GQGT+A  +  A+  A ++   KL
Sbjct: 900 SSQGVTAEQWATQVSGVIGGKSG-GKEPVRQGQGTNAENIDEAVATAEKWLKEKL 953


>gi|302666339|ref|XP_003024770.1| hypothetical protein TRV_01052 [Trichophyton verrucosum HKI 0517]
 gi|291188840|gb|EFE44159.1| hypothetical protein TRV_01052 [Trichophyton verrucosum HKI 0517]
          Length = 925

 Score =  761 bits (1964), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 447/965 (46%), Positives = 594/965 (61%), Gaps = 87/965 (9%)

Query: 42  ASAVAAMPGADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQ 101
           A++ ++ P A  Q VEWPA +VRDTF  +F+   H                         
Sbjct: 2   AASTSSQPPAGQQTVEWPALRVRDTFLDYFKKNGHT------------------------ 37

Query: 102 YKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGD 161
                 GT DPN+  ++L RA N+QK         DLDDVGKD+YHHTFFEMLGNWSFGD
Sbjct: 38  -----FGTVDPNSDFAQLKRAHNSQK---------DLDDVGKDSYHHTFFEMLGNWSFGD 83

Query: 162 YFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLP 220
           YFK EAI+++WELLTKVY L  DRLY TYF G+E AG+ PD EARDIW    +    +L 
Sbjct: 84  YFKKEAIQFSWELLTKVYGLDPDRLYVTYFEGNEAAGVGPDIEARDIWRSVGVKDDHILT 143

Query: 221 FGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDG 280
              KDNFWEMGD GPCGPCSEIHYDR G R+AA LVN DDP  +EIWN VFIQ+NRE D 
Sbjct: 144 GDMKDNFWEMGDQGPCGPCSEIHYDRIGGRNAAHLVNQDDPDVLEIWNNVFIQYNREPDR 203

Query: 281 SLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDA 340
           SL+PLP +HVDTGLG+ERL SILQNK SNYDTDVF P+F+AIQ  TGARPY+GK GA+DA
Sbjct: 204 SLRPLPNQHVDTGLGYERLVSILQNKSSNYDTDVFTPLFNAIQNITGARPYTGKFGAEDA 263

Query: 341 DKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFN 399
           D +D AYRVVADH+RTL+FAI DG+ P NEGR YV+RR+LRR VRY  + L+ + G FF+
Sbjct: 264 DGIDTAYRVVADHLRTLTFAITDGAAPNNEGRGYVVRRVLRRGVRYARKYLQVEIGSFFS 323

Query: 400 GLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQ---DVQGKV 456
            LV  +V+ MGD+FPE+K+++  + EI+  EE SF KTL +G  +F+  AQ   D     
Sbjct: 324 KLVPALVEQMGDMFPEIKRKQTDVMEILDEEEVSFAKTLDRGERQFENYAQQALDSGAGK 383

Query: 457 LSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIV 516
           L G D + L+DT+GFP+DLT+LMAEER L +D   F  A  +A+E S+  Q K A   + 
Sbjct: 384 LPGADVWRLYDTFGFPVDLTRLMAEERQLTIDDAEFEEARLKAKEASK-GQAKTASDLLK 442

Query: 517 MDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESV--VPGNE-VGIVLA 573
           +     + L K GV  TDD  KF    +  + IKAI  G + I+S   +P NE +GI+L 
Sbjct: 443 LTVHTLSTLEKNGVPKTDDDAKF-GKGNIVANIKAICHGKDVIDSTKDIPANEQIGIILD 501

Query: 574 SSSFYAEQGGQIFDEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVIC 631
            ++FYAEQGGQ +D G   I+G      V+NVQ+YGG+V+H G +    G FSV + VI 
Sbjct: 502 KTNFYAEQGGQEYDTGKIVIDGQ-AELDVQNVQMYGGYVLHTGFIK--YGNFSVNDSVIA 558

Query: 632 KVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLR 691
           + D  RR  I  NHT TH+LNFALREVLGD +DQKGS+V  EKLRFDFSH   +    L 
Sbjct: 559 EYDELRRWPIRNNHTGTHILNFALREVLGDGIDQKGSLVAAEKLRFDFSHKSAISDSDLE 618

Query: 692 RIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADP 751
           +IE+   + I+    V+S+E  LA A+ I G+RAVFGE YPDPVRVV++G +++++L + 
Sbjct: 619 KIEAKSTDYIRQNCAVYSQEVPLATAREITGVRAVFGETYPDPVRVVSVGVELDEILKNV 678

Query: 752 ENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSL 811
           ++  W  +S E CGGTH+  T + +   +L E GIAKGIRRI AVT   A++    A   
Sbjct: 679 KDPRWEGVSIEFCGGTHVQKTGDIKDLVILEESGIAKGIRRIIAVTGEDAHEVQRVAREF 738

Query: 812 EKEVD--------------------DASKIEGSLLEK----NQVRKAQKKV--AEENLQK 845
            + ++                    D +++  S +EK    NQ  +  KK+  A++  QK
Sbjct: 739 GERLNRFEKMPAGPERDAEIKSLQVDLNQLTISAVEKTKYRNQFTQIHKKITDAQKAAQK 798

Query: 846 A-VKVATETAEAAASNGK--PFCISRVEVGLDAAAVREAVLKV-IEQKGMPVMVFSTDET 901
           A VK A +   A     K  P  + ++ +  +  A+ E++  V  +  G  + VF+ D  
Sbjct: 799 AEVKTAIDAISAYFEENKDSPSLVIKLPITANQKAISESLNHVKTKLSGKALYVFAAD-A 857

Query: 902 TNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMD 961
           +  A  C   P+ +  +K    +EW +A    + G+ G GK  +A G GT+  +V  A+D
Sbjct: 858 SKVAHGCYVTPDLT--TKGASANEWASAVSSIIGGKAG-GKAPVAIGNGTEVNKVDEALD 914

Query: 962 LAAEF 966
            A ++
Sbjct: 915 EATKY 919


>gi|154321327|ref|XP_001559979.1| hypothetical protein BC1G_01538 [Botryotinia fuckeliana B05.10]
          Length = 952

 Score =  758 bits (1957), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 441/962 (45%), Positives = 595/962 (61%), Gaps = 61/962 (6%)

Query: 55  VVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNT 114
             +W A  VR  F  FFE   H    SS VVP NDPTLLF NAGMNQ+KPIFLGT     
Sbjct: 7   TTKWTAPVVRKQFLSFFEKNAHSVVPSSSVVPHNDPTLLFTNAGMNQFKPIFLGTVGKTD 66

Query: 115 QLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWEL 174
            +++L RA +TQK         DLDDVGKD+YHHTFFEMLGNWSFGDYFK +AI  AWEL
Sbjct: 67  DMAQLKRAVDTQK---------DLDDVGKDSYHHTFFEMLGNWSFGDYFKADAIGMAWEL 117

Query: 175 LTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDT 233
           LTKVY L +DRLY TYF GD +  +  D EA+++WLK  +    +L    KDNFWEMG+T
Sbjct: 118 LTKVYGLDSDRLYVTYFEGDAENNVPADTEAKNLWLKAGVKEDHILTGNMKDNFWEMGET 177

Query: 234 GPCGPCSEIHYDRTGN-RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDT 292
           GPCGPCSEIHYDR G  R+AA LVN DDP  +EIWNIVFIQF+R+ D SLK LPAKH+DT
Sbjct: 178 GPCGPCSEIHYDRIGGGRNAAHLVNQDDPNVLEIWNIVFIQFDRQKDRSLKTLPAKHIDT 237

Query: 293 GLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVAD 352
           G+G+ERL S+LQ+K SNYDTDVF P+F  IQ+ T ARPY+ K G DD D +D AYRVVAD
Sbjct: 238 GMGYERLVSVLQDKSSNYDTDVFSPLFAKIQEVTNARPYTDKYGKDDTDGIDTAYRVVAD 297

Query: 353 HIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGD 411
           HIR L+FAI+DG  P NEGR YV+RR+LRR  RY  +   A+ G FF+ ++  +V+ MG+
Sbjct: 298 HIRLLTFAISDGGVPNNEGRGYVVRRVLRRGSRYARKYFNAEIGSFFSKILPALVEQMGE 357

Query: 412 VFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKK-AAQDVQ--GKVLSGQDAFILWDT 468
            FPE+ +++  ++EI+  EE +F +TL +G + F+K AAQ ++   K LSG D + L+DT
Sbjct: 358 QFPEIVKKQQDVKEILDEEEEAFARTLDRGEKMFEKYAAQAIKTNTKKLSGADVWRLYDT 417

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIV-MDADATAALHK 527
           +GFP DLT++MAEERGL  D      A ++ARE S+S   K+A      +D    A L  
Sbjct: 418 FGFPEDLTKIMAEERGLETDEGEIEIAKEKAREASKSV--KEAAHTFAKLDVHQIAELDN 475

Query: 528 RGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESV--VPGNE-VGIVLASSSFYAEQGGQ 584
            G+   +D  KF    D    I+ IY G  F++S   +P ++  GI+L  ++FYAEQGGQ
Sbjct: 476 MGIPRPNDDAKFSK-GDSTGKIQLIYDGKNFLKSTADLPNDKPFGILLDKTNFYAEQGGQ 534

Query: 585 IFDEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIA 642
           +FD G   I+G+   F V + Q YGG+++H G +    G F  G+EVIC+ D  RR+ I 
Sbjct: 535 VFDTGKIIIDGV-AEFKVLDTQAYGGYIVHNGYMD--YGDFKAGDEVICEYDELRRQPIR 591

Query: 643 PNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIK 702
            NHT TH+LN ALRE LG+ ++QKGS+V  EKLRFDFSH   V    L+++E   N  IK
Sbjct: 592 NNHTGTHILNHALREHLGEDINQKGSLVDQEKLRFDFSHKAQVTLPELKKVEDSANSYIK 651

Query: 703 AELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAE 762
               ++SK+  L  AK I G+RAVFGE YP+PVRVV++G +V+ LLA+P+N EW  +S E
Sbjct: 652 QNCKIYSKDVDLDIAKGIEGVRAVFGETYPNPVRVVSVGVEVDVLLAEPKNPEWRKVSVE 711

Query: 763 LCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV------- 815
            CGGTH+  T   +   ++ E GIAKGIRRI A T   A++    A    K +       
Sbjct: 712 FCGGTHVDQTGIIKDLVIVEESGIAKGIRRIIAYTGDAAHEVQRIAMEFGKRIAALDAMP 771

Query: 816 -------------DDASKIEGSLLEKNQVR----KAQKKVAEENLQKA---VKVATETAE 855
                        +D + +  S+L K  ++    K QK V +E  +K     K A +T  
Sbjct: 772 HGVEKEQEVKSTQNDLNHLTISVLAKEDLKKKFTKVQKDVLDEQKKKQKAESKTALDTVT 831

Query: 856 AAASNGK----PFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGV 911
           A  ++ K       I+++ +  ++ A+ + V+   + K     V+    + ++  V  GV
Sbjct: 832 AYFADSKNKDSTAYIAQLPISANSKAIAD-VMNHFKSKAKDKTVYLFGGSASEGAVVHGV 890

Query: 912 PEKSD-QSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMK 970
              +D  SK +   +W  A  + + GR G GK    +GQGT+  ++  A+ +A ++ A K
Sbjct: 891 YVGTDAASKGVSAEQWAAAVSEVVGGRSG-GKEPTRTGQGTNPDKIEDAVAVAEKWFAEK 949

Query: 971 LR 972
           L+
Sbjct: 950 LK 951


>gi|258575517|ref|XP_002541940.1| alanyl-tRNA synthetase [Uncinocarpus reesii 1704]
 gi|237902206|gb|EEP76607.1| alanyl-tRNA synthetase [Uncinocarpus reesii 1704]
          Length = 931

 Score =  754 bits (1948), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 421/935 (45%), Positives = 560/935 (59%), Gaps = 102/935 (10%)

Query: 81  SSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDD 140
           SS VVP++DPTLLFANAGMNQYK IFLGT DPN+  + L RA N+QKCIRAGGKHNDLDD
Sbjct: 44  SSSVVPLSDPTLLFANAGMNQYKSIFLGTVDPNSDFAHLKRAHNSQKCIRAGGKHNDLDD 103

Query: 141 VGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLA 200
           VGKD+YHHTFFEMLGNWSFGDYFK EAI+++W+LLTKVY L  DRLY TYF G++ AG+ 
Sbjct: 104 VGKDSYHHTFFEMLGNWSFGDYFKKEAIQYSWDLLTKVYGLEPDRLYVTYFEGNKDAGIE 163

Query: 201 PDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNND 259
           PD E +D+WL   +    +L    KDNFWEMGD GPCGPCSE+HYDR G R+AA LVN D
Sbjct: 164 PDLETKDLWLGVGVKEDHILSGNMKDNFWEMGDQGPCGPCSEVHYDRIGGRNAAHLVNMD 223

Query: 260 DPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIF 319
           DP  +EIWN VFIQ+NRES+  L+PLP KHVDTGLG+ERL S+LQ+K SNYDTDVF P+F
Sbjct: 224 DPNVLEIWNNVFIQYNRESEKILRPLPNKHVDTGLGYERLVSVLQDKSSNYDTDVFSPLF 283

Query: 320 DAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRI 379
           D I++ TG RPY+GK G +D D +D AYRVVADH+RTL+FAI+DG+ P NEGR YV  + 
Sbjct: 284 DVIREITGVRPYAGKFGEEDVDGIDTAYRVVADHVRTLTFAISDGAAPNNEGRGYVWTQ- 342

Query: 380 LRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLL 439
                                        MGD+FPE+K+++  + EI+  EE SF KTL 
Sbjct: 343 -----------------------------MGDMFPEIKKKQTDVMEILDEEEISFAKTLD 373

Query: 440 KGIEKFKKAAQDVQ----GKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNA 495
           +G  +F+  AQ  +    GK L G D + L+DT+GFP+DLTQLMAEERGL +D   F  A
Sbjct: 374 RGERQFEIYAQQAKESGSGK-LHGADVWRLYDTFGFPVDLTQLMAEERGLSIDNTEFEEA 432

Query: 496 MDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTG 555
             +A+E S+  Q K A   + +       L K  V  TDDS KF    + +S I +IY G
Sbjct: 433 RLKAKEASK-GQAKAASDLLKLTVHDLGKLEKDNVPKTDDSAKF-GRGNIQSQILSIYHG 490

Query: 556 SEFIES---VVPGNEVGIVLASSSFYAEQGGQIFDEG--FIEG------LFGSFYVRNVQ 604
            EF+ S   +  G ++GI+L  ++FYAEQGGQ +D G   ++G       FG  ++R   
Sbjct: 491 KEFVASTNGISAGEQIGIILDKTNFYAEQGGQEYDIGKIIVDGHRGVTFQFGVPFLRPFV 550

Query: 605 IYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVD 664
            Y      +   T+G     + E ++  +   +R  ++ NHT TH+LNFALREVLG+ +D
Sbjct: 551 FYAKQARQLPQATDG----KLQERLL--LTRPQRHEVSNNHTGTHILNFALREVLGNGID 604

Query: 665 QKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLR 724
           QKGS+V  EKLRFDFSH   +    L +IE+   E I+    V+S++  LA+A+ I G+R
Sbjct: 605 QKGSLVAAEKLRFDFSHKSAISDSDLEKIEAKSTEYIRQNCAVYSQDVPLAKAREITGVR 664

Query: 725 AVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEE 784
           AVFGE YPDPVRVV++G +++++L D ++  W  +S E CGGTH+  T + +   +L E 
Sbjct: 665 AVFGETYPDPVRVVSVGVELDEILKDVKDPRWKGVSIEFCGGTHVQKTGDIKDLVILEES 724

Query: 785 GIAKGIRRITAVTTGLA----------------YKAFEAACSLEKEVD----DASKIEGS 824
           GIAKGIRRI AVT   A                ++  E     E+E      D +++  S
Sbjct: 725 GIAKGIRRIIAVTGKDAHEVQRIAREFGERLNKFEKMEQGPQKEQEAKLVQVDLNQLSIS 784

Query: 825 LLEK-----------NQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGL 873
            +EK            QV  AQK + ++ ++ A+       E   +    F + R+    
Sbjct: 785 AVEKARFRDQFARIHKQVLDAQKALQKQEIKAALDTINSHFEKPENKDTSFLVVRLPTSA 844

Query: 874 DAAAVREAVLKVIEQ-KGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQ-LEVSEWLTAAL 931
           +A A+ E++  V  + K   + VF+ DE   +  V  G    S  S Q    S W     
Sbjct: 845 NAKAISESINHVKSKLKDKSLYVFAADEQQGR--VAHGCYVSSSLSAQGASASSWSGVV- 901

Query: 932 QPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEF 966
                        +  G GTD  +V  A+D A ++
Sbjct: 902 -----------SAIVGGNGTDVGKVDEALDAATKY 925


>gi|14589381|gb|AAK70636.1|AC091238_14 Putative cytosolic tRNA-Ala synthetase [Oryza sativa Japonica
           Group]
          Length = 694

 Score =  754 bits (1947), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/634 (60%), Positives = 490/634 (77%), Gaps = 35/634 (5%)

Query: 368 GNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHIREII 427
           GNEGREYVLRRILRRAV +G + LKA+ GFF+ LV++ V++MGDVFPELK  E  I++II
Sbjct: 65  GNEGREYVLRRILRRAVHFGHQKLKAKQGFFSSLVHVFVQLMGDVFPELKDNEKKIKDII 124

Query: 428 AAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLV 487
             EE SF  TL KG EKFKKAA  V  K   G DAF+LWDTYG+P+DLT++M  + GL V
Sbjct: 125 KDEEESFENTLAKGFEKFKKAADAV--KESGGTDAFVLWDTYGYPVDLTEVMGVDYGLSV 182

Query: 488 DIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQDHKS 547
           D EGF+ AM+EAR+++R+A+ K    +IV+DA+ATA L  +G+ +TDDS K+  ++D+ S
Sbjct: 183 DREGFDAAMEEARQKARNARFKAGENSIVLDANATAQLRNQGLASTDDSPKY-GYKDNDS 241

Query: 548 VIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYG 607
           V+KAIYTGSE++ +     + G+VL S+SFYAEQGGQI+D G IEG FGSF V NVQ++ 
Sbjct: 242 VVKAIYTGSEYVSAASGDEDFGLVLESTSFYAEQGGQIYDTGKIEGSFGSFNVTNVQVFA 301

Query: 608 GFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKG 667
           G+V+H+GS T+G+   SVG++V CKVDY RR LIAPNHTCTHMLNFALRE+LGDHVDQKG
Sbjct: 302 GYVLHMGSFTKGSKALSVGDKVACKVDYARRALIAPNHTCTHMLNFALREILGDHVDQKG 361

Query: 668 SVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVF 727
           S+VLPEKLRFDFSHGKPV PE LR+IESIVN+QIK +L+VF++E  LA+AK INGLRAVF
Sbjct: 362 SIVLPEKLRFDFSHGKPVQPEDLRKIESIVNQQIKDKLEVFAREIKLADAKRINGLRAVF 421

Query: 728 GEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIA 787
           GE+YPDPVRVV++GRKVEDLLA+PE+KEWLSIS ELCGGTH+ NT EAEAFALLSEEGIA
Sbjct: 422 GEIYPDPVRVVSVGRKVEDLLANPESKEWLSISTELCGGTHIKNTSEAEAFALLSEEGIA 481

Query: 788 KGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEK------------------- 828
           KG+RRITAVT   A  A + A S++ E+++ASK+EG++LEK                   
Sbjct: 482 KGVRRITAVTAKHASDAIKDASSIDSEINEASKLEGAILEKTIASIKSKLDTALIPAARK 541

Query: 829 -----------NQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAA 877
                      +++RKA+KK+ EEN+QKAVK A + A+ A S GK FC++ V+VGLD +A
Sbjct: 542 ADLKGRVSKLEDELRKAKKKMGEENIQKAVKFAIDAAQTALSEGKRFCVAHVDVGLDTSA 601

Query: 878 VREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGR 937
           +REAV+KV +QK +P+M+FSTDE TNKAV+ AGVP  +  S  L+V +WLT ++ PLKG+
Sbjct: 602 IREAVIKVKDQKDLPIMLFSTDEATNKAVIYAGVPPSAANS--LKVLDWLTPSIAPLKGK 659

Query: 938 CGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
            G GK G+A GQGT+A+Q+  AM++A + A+MKL
Sbjct: 660 GGGGKNGIAQGQGTEASQLKEAMEVATQIASMKL 693


>gi|380495208|emb|CCF32573.1| alanyl-tRNA synthetase [Colletotrichum higginsianum]
          Length = 955

 Score =  752 bits (1941), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 442/954 (46%), Positives = 585/954 (61%), Gaps = 44/954 (4%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           +WP   VR TF +FFE + H    SS VVP NDPTLLF NAGMNQ+KPIFLGT      +
Sbjct: 5   KWPGAVVRKTFLEFFEKRGHTIVPSSSVVPHNDPTLLFTNAGMNQFKPIFLGTISKADPM 64

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
             L RA +TQKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK +AIE +WELLT
Sbjct: 65  YSLKRATDTQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKDAIEMSWELLT 124

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
           KVY L   RLY TYF G+   GL PD EA+ +W    +P   +LP   KDNFWEMGD GP
Sbjct: 125 KVYGLDPSRLYVTYFEGNPDMGLEPDLEAKGLWQSVGVPEDHILPGNMKDNFWEMGDQGP 184

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPCSE+HYD+ G R+A+ LVN DDP  +EIWN VFIQ++R+ D SLK LPAKHVDTG+G
Sbjct: 185 CGPCSEVHYDKIGGRNASDLVNQDDPMVVEIWNNVFIQYDRQPDRSLKSLPAKHVDTGMG 244

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
           FERL S LQN +SNY TD+F P+F  I++ TGARPY+ K GADD D +D AYRVVADHIR
Sbjct: 245 FERLVSALQNTVSNYATDIFTPLFQRIEEVTGARPYTDKYGADDVDGIDTAYRVVADHIR 304

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFP 414
            L+F+++DG+ P N+GR YV+RR+LRR VRY  +   A+ G FF+ ++  +V  MG+ FP
Sbjct: 305 LLTFSMSDGAVPNNDGRGYVVRRVLRRGVRYARKYFNAEIGSFFSKILPALVDQMGEQFP 364

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTYGF 471
           E+ +++  IREI+  EE +F +TL +G    EK+  AA     K LSG + + L+DT+GF
Sbjct: 365 EIVKKQQDIREILDEEEEAFARTLDRGEAQFEKYANAAIKKGEKKLSGAEVWRLYDTFGF 424

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR-GV 530
           P+DLT+LMAEER L +D +    A D+ARE S+  +N     A  ++    A L ++  V
Sbjct: 425 PVDLTKLMAEERKLEIDDDEVKVAQDKAREASKVVKNSVQTFA-KLNVHQIAELEQQLNV 483

Query: 531 LATDDSFKFIWFQDHKSVIKAIYTGSEFIES---VVPGNEVGIVLASSSFYAEQGGQIFD 587
             TDD  K++   D K+ ++ IY G  F++S   V     +G++L  ++FYAE GGQ+ D
Sbjct: 484 ARTDDEGKYVK-GDSKAKVQLIYDGKAFVKSTKDVAENTPLGLLLDKTNFYAESGGQVAD 542

Query: 588 EG-FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
            G  +      F V +VQ YGG+++H G L  G    S G EVIC+ D  RR  I  NHT
Sbjct: 543 TGRIVIDDVAEFKVLDVQNYGGYIVHNGYLEYGT--LSSGNEVICEYDELRRSPIRNNHT 600

Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD 706
            TH+LN +LREVLGD ++QKGS+V  EKLRFDFSH   V    L++IE   N  I+    
Sbjct: 601 GTHILNHSLREVLGDDINQKGSLVDNEKLRFDFSHKTAVTIPELKKIEDFSNSYIRQNGK 660

Query: 707 VFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGG 766
           +++KE  L  AK I G+RAVFGE YP+PVRVV++G  V+ LL +P+N EW  +S E CGG
Sbjct: 661 IYAKEVDLDLAKGIEGVRAVFGETYPNPVRVVSVGVDVDTLLGNPKNPEWRKVSVEFCGG 720

Query: 767 THLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVD---------- 816
           TH+  T   +   ++ E GIAKGIRRI A T   A++    A    K +D          
Sbjct: 721 THVEQTGLIKDLVIVEESGIAKGIRRIIAYTGDAAHQVQREADEFSKRLDALEALPFGPE 780

Query: 817 ----------DASKIEGSLLEKNQVRKAQKKV------AEENLQKA-VKVATETAEAAAS 859
                       +++  S L K  ++K   K+       ++  QKA  K A +T  A   
Sbjct: 781 KEQEIKTTQHALNQLTISTLTKEDIKKRFDKIIKSVTDEQKKRQKAEAKTALDTVVAHFD 840

Query: 860 NGK--PFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQ 917
             K   + + ++ +  +A A+ E V+K  + K     V+    + N+  V  GV   +  
Sbjct: 841 KNKDSKWFVGQLPISANAKAIGE-VVKHFQSKDKERSVYLFGGSKNEGSVAHGVYVGTHL 899

Query: 918 SKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           S Q   +E   A +  + G    GK     GQGT+A  +  A+  A  +   KL
Sbjct: 900 SSQGVTAEQWAAQVSGVVGGKSGGKEPTRQGQGTNAENLDEAVATAERWLKEKL 953


>gi|358342377|dbj|GAA28662.2| alanyl-tRNA synthetase [Clonorchis sinensis]
          Length = 931

 Score =  750 bits (1937), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 432/931 (46%), Positives = 559/931 (60%), Gaps = 88/931 (9%)

Query: 121 RACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYR 180
           RA NTQKCIRAGGKHNDLDDVG+D YHHTFFEMLGNWSFGDYFK EA  WAW+LLT+V++
Sbjct: 6   RAVNTQKCIRAGGKHNDLDDVGRDVYHHTFFEMLGNWSFGDYFKKEACVWAWQLLTEVWK 65

Query: 181 LPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +P +RLY TYFGG E  GL PD EARDIWL   LP  RVLPFG KDNFWEMG+TGPCGPC
Sbjct: 66  IPKERLYVTYFGGTESTGLPPDEEARDIWLSIGLPKERVLPFGMKDNFWEMGETGPCGPC 125

Query: 240 SEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERL 299
           SEIHYDR G RDAASLVN DDP  +EIWN+VFIQFNRE DGSL+PLPAKH+DTGLGFER+
Sbjct: 126 SEIHYDRIGGRDAASLVNMDDPDVLEIWNLVFIQFNREEDGSLRPLPAKHIDTGLGFERI 185

Query: 300 TSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSF 359
            S+LQ K SNYDTD+F P+F AIQ  TGA PYSG+VGA+D D  DMAYRV+ADH R L+ 
Sbjct: 186 LSVLQGKRSNYDTDLFQPLFAAIQSGTGAPPYSGRVGAEDVDGKDMAYRVLADHARVLTI 245

Query: 360 AIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQR 419
           A++DG    N GR YVLRRILRRAVRY  EVL A  GFF  LV++VV  + D FPEL   
Sbjct: 246 ALSDGGRAQNTGRGYVLRRILRRAVRYAVEVLGAPPGFFATLVDVVVTSLKDAFPELAND 305

Query: 420 EAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV---QGK----VLSGQDAFILWDTYGFP 472
              ++E+I  EE  F  TL +G     +   D+   QG     VL G  A+ L+DTYGFP
Sbjct: 306 PYTVKELINEEEQQFLTTLKRGQRLLSRTISDIKRTQGAAGTGVLPGTVAWRLYDTYGFP 365

Query: 473 LDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLA 532
           LDLTQLMAEE  L +D+ G+  A + A+ RS++     AG  + +D  A A L K+G+  
Sbjct: 366 LDLTQLMAEEHNLKLDLAGYEKAKELAQARSQTGA-AGAGAIVDLDVHAIAELRKQGIPG 424

Query: 533 TDDSFKFIW---------FQDHKSVIKAIYTGSEFIESVV-PGNEVGIVLASSSFYAEQG 582
           TDD+ K+ +         F + ++ I +I   S F+  V   G   G +L  + FYAE G
Sbjct: 425 TDDTEKYNYQADAQGNYAFPEIEATILSIRQESMFVPDVSQSGQLCGFILDKTIFYAEAG 484

Query: 583 GQIFDEGFIEGLFG---SFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRK 639
           GQ++D GFI  +        V +VQ  GG+V+HIG L    G F++G++V   +D  RR 
Sbjct: 485 GQLYDTGFITKISDDACELCVTDVQYRGGYVLHIGRLE---GHFAIGDKVRMCIDGVRRS 541

Query: 640 LIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNE 699
            +  NHT TH+LNFALR+VLG+  DQKGS+V P++LRFDF+  + +  + +R  E +   
Sbjct: 542 GLMRNHTGTHVLNFALRKVLGE-ADQKGSLVAPDRLRFDFTAKRGMSRDEIRDAEEVART 600

Query: 700 QIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSI 759
            +++   V++   +L   K I GLRAVFGEVYPDPVRVV++   V+ L+ADP      + 
Sbjct: 601 VLESNAPVYAANVSLPVGKSIQGLRAVFGEVYPDPVRVVSVAVPVDKLVADPTGPAGNTT 660

Query: 760 SAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKE----- 814
           S E CGGTH+ N +   +  ++SEE IAKGIRRI A+T     +A   A  LE E     
Sbjct: 661 SVEFCGGTHVHNVKHIGSLVIVSEEAIAKGIRRIVALTGHEGERAQREAQELEHEVSHLS 720

Query: 815 -----------------VDDASKIE--------GSLLEK-------NQVRK--------A 834
                            VD    +E         SL E+         VR         A
Sbjct: 721 GAIHMASSLTLANGDKPVDKDKNVEFRELTQKLASLSERLAQANISQHVRDRLRADLGLA 780

Query: 835 QKKVAEENLQKAVKVATETAEAAASNGKPFCISR---------VEVGLDAAAVR--EAVL 883
           +KK+ + +      + T+  E A    +  C ++         V V  D A  +   + L
Sbjct: 781 KKKLDDRDKNAKASITTQVLEEARKLVESCCSNKQDGFGGNYMVHVFQDEANAKAINSAL 840

Query: 884 KVIEQKGMP---VMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGK 940
           K++E +G P   VM  S+D    K +  + VP K+   + L+ +EW+ +    + G+ G 
Sbjct: 841 KILE-RGCPDIAVMAISSDPVGKKLLCLSQVP-KNLIDRGLKANEWVASVSSLINGK-GG 897

Query: 941 GKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           GK   A   G+    +   + LA +FA  KL
Sbjct: 898 GKESSAQAVGSRVDCLDEVVRLANQFAKAKL 928


>gi|323331402|gb|EGA72819.1| Ala1p [Saccharomyces cerevisiae AWRI796]
          Length = 648

 Score =  750 bits (1936), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/643 (57%), Positives = 454/643 (70%), Gaps = 10/643 (1%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           +W AT VR+TF  +F+ K H   KSSPVVP +DPTLLFANAGMNQYKPIFLGT DP +  
Sbjct: 8   KWTATNVRNTFLDYFKSKEHKFVKSSPVVPFDDPTLLFANAGMNQYKPIFLGTVDPASDF 67

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
             L RA N+QKCIRAGGKHNDL+DVGKD+YHHTFFEMLGNWSFGDYFK EAI ++W LLT
Sbjct: 68  YTLKRAYNSQKCIRAGGKHNDLEDVGKDSYHHTFFEMLGNWSFGDYFKKEAITYSWTLLT 127

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
           +VY +P DRLY TYF GDEK GL PD EAR++W    +P   +LP   KDNFWEMGD GP
Sbjct: 128 EVYGIPKDRLYVTYFEGDEKLGLEPDTEARELWKNVGVPDDHILPGNAKDNFWEMGDQGP 187

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPCSEIHYDR G R+AASLVN DDP  +E+WN+VFIQFNRE DGSLKPLPAKH+DTG+G
Sbjct: 188 CGPCSEIHYDRIGGRNAASLVNMDDPDVLEVWNLVFIQFNREQDGSLKPLPAKHIDTGMG 247

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
           FERL S+LQ+  SNYDTDVF P+F+ IQ+ T  RPYSG  G +D D +D AYRV+ADH+R
Sbjct: 248 FERLVSVLQDVRSNYDTDVFTPLFERIQEITSVRPYSGNFGENDKDGIDTAYRVLADHVR 307

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFP 414
           TL+FA+ADG  P NEGR YVLRRILRR  RY  + +    G FF+ L   ++  + D+FP
Sbjct: 308 TLTFALADGGVPNNEGRGYVLRRILRRGARYARKYMNYPIGNFFSTLAPTLISQVQDIFP 367

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTYGF 471
           EL +  A + EI+  EEASF KTL +G    EK+  AA   + K L G+  + L+DTYGF
Sbjct: 368 ELAKDPAFLFEILDEEEASFAKTLDRGERLFEKYASAASKTESKTLDGKQVWRLYDTYGF 427

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           P+DLT+LMAEE+GL +D  GF  A  E+ E S+    K     I ++    + L+   V 
Sbjct: 428 PVDLTELMAEEQGLKIDGPGFEKAKQESYEASKRGGKKDQSDLIKLNVHELSELNDAKVP 487

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVV-PGNEVGIVLASSSFYAEQGGQIFDEG- 589
            T+D FK+       +++K ++ G+ F++ +  PG + GI+L  + FYAEQGGQ +D G 
Sbjct: 488 KTNDEFKYGSANVEGTILK-LHDGTNFVDEITEPGKKYGIILDKTCFYAEQGGQEYDTGK 546

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
            +      F V NVQ+Y GFV H GSL E  G+ SVG+++I   D  RR  I  NHT TH
Sbjct: 547 IVIDDAAEFNVENVQLYNGFVFHTGSLEE--GKLSVGDKIIASFDELRRFPIKNNHTGTH 604

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRR 692
           +LNFAL+E LG+ VDQKGS+V PEKLRFDFSH K V  E L++
Sbjct: 605 ILNFALKETLGNDVDQKGSLVAPEKLRFDFSHKKAVSNEELKK 647


>gi|441597619|ref|XP_004087394.1| PREDICTED: LOW QUALITY PROTEIN: alanine--tRNA ligase, cytoplasmic
           [Nomascus leucogenys]
          Length = 912

 Score =  748 bits (1930), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/965 (44%), Positives = 564/965 (58%), Gaps = 117/965 (12%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A+++R  F  FF+   H    SS  +P++DPTLLFANAGMNQ+KPIFL T DP+  ++KL
Sbjct: 7   ASEIRQRFIDFFKRNEHTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPMAKL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WSFGDYFK  A + A ELLT+ +
Sbjct: 67  SRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQEF 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +P +RLY TYFGGDE AGL PD E + IW    L  +++LP   KDNFWEMGDTGPCGP
Sbjct: 127 GIPVERLYVTYFGGDEAAGLEPDLECKQIWQNLGLDDTKILPGNMKDNFWEMGDTGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIHYDR G RDAA LVN DDP  +EIWN+VFIQ+NRE+DG LKPLP K +DTG+G ER
Sbjct: 187 CSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNREADGILKPLPKKSIDTGMGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L S+LQNKMSNYDTD+F+P F+AIQ+ TGARPY+GKVGA+DAD +DMAYRV+ADH RT++
Sbjct: 247 LVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADHARTIT 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A+ADG  P N GR YVLRRILRRAVRY  E L A  GFF  LV++VV+ +GD FPELK+
Sbjct: 307 VALADGGRPDNTGRGYVLRRILRRAVRYAHEKLNASRGFFATLVDVVVQSLGDAFPELKK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLTQ 477
               +++II  EE  F KTL +G     +  Q +   K + G  A++L+DTYGFP+DLT 
Sbjct: 367 DPDMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDSKNIPGDTAWLLYDTYGFPVDLTG 426

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA--IVMDADATAALHKRGVLATDD 535
           L+AEE+GL+VD++GF      A+ +S   Q K AGG   I++D  A   L  RG+  TDD
Sbjct: 427 LIAEEKGLVVDMDGFEEERKLAQLKS---QGKGAGGEDLIMLDIYAIEELRARGLEVTDD 483

Query: 536 SFKFIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           S K+ +         F+   +   A+     F+E V  G E G+VL  + FYAEQGGQI+
Sbjct: 484 SPKYNYHLDSSGSYVFETPVATXDALRREKMFVEEVSTGQECGVVLDKTCFYAEQGGQIY 543

Query: 587 DEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
           DEG                   +++ +   +E    F+V                     
Sbjct: 544 DEG-------------------YLVKVDDSSEDKTEFTVKNA------------------ 566

Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQI----- 701
                     +V G +V   G++         +   K  D   L   E + NE++     
Sbjct: 567 ----------QVRGGYVLHIGTI---------YGDLKVGDQVRLFIDEILKNEEVGSGMX 607

Query: 702 KAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISA 761
           ++   V++++  LA AK I GLRAVF E YPDPVRVV+IG  V +LL DP        S 
Sbjct: 608 QSSRPVYTQDCPLAAAKGIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTSV 667

Query: 762 ELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYK------------------ 803
           E CGGTHL N+  A AF +++EE IAKGIRRI AVT   A K                  
Sbjct: 668 EFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKAPGSTKQGSRAIVPHLIA 727

Query: 804 ------AFEAACSLEKEVDDASKIEGSLLEKNQVRKAQKKVAE--ENLQKAVK------V 849
                 A +A  SL       + I     +K+++R+  K + +  ++L +A K      V
Sbjct: 728 GTPWILALDAGLSLLLPALATAVI--PQWQKDELRETLKSLKKVMDDLDRASKADVQKRV 785

Query: 850 ATETAEAAASN-GKPFCISRVEVGLDAAAVREAVLKVIEQKG--MPVMVFSTDETTNKAV 906
             +T +   SN  +P  I  +E G  A A+ EA LK+ +        M+F+ D    K  
Sbjct: 786 LEKTKQLIDSNPNQPLVILEMESGASAKALNEA-LKLFKTYSPQTSAMLFTVDNEAGKIT 844

Query: 907 VCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEF 966
               VP+ +  ++ L+ SEW+      + G+ G GK   A   G +   +  A+ LA  F
Sbjct: 845 CLCQVPQNA-ANRGLKASEWVQQVSGLMDGK-GGGKDVSAQATGKNVGCLQEALQLATSF 902

Query: 967 AAMKL 971
           A + L
Sbjct: 903 AQLHL 907


>gi|346973803|gb|EGY17255.1| alanyl-tRNA synthetase [Verticillium dahliae VdLs.17]
          Length = 958

 Score =  747 bits (1928), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/803 (48%), Positives = 535/803 (66%), Gaps = 24/803 (2%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           +WPA KVR+TF KFFE++ H    SS VVP NDPTLLF NAGMNQ+K IFLGT   +  +
Sbjct: 6   KWPAAKVRETFIKFFEERGHTVVPSSSVVPHNDPTLLFTNAGMNQFKSIFLGTIAQSDPM 65

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFG--DYFKNEAIEWAWEL 174
             L RA +TQK IRAGGK +DL+DVG D+YHH+FFEMLGNWSFG  DYFK +AI+++WE 
Sbjct: 66  YGLKRATDTQKVIRAGGKASDLEDVGHDSYHHSFFEMLGNWSFGPQDYFKKDAIKYSWEF 125

Query: 175 LTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDT 233
           +T+   L  DRLY TYF GD   GL PD E++++W    +P S +LP    DN+W MGDT
Sbjct: 126 MTETLGLEKDRLYVTYFEGDPAQGLEPDLESKELWKSVGVPESHILPGSKADNWWSMGDT 185

Query: 234 GPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTG 293
           GPCGPCSE+HYD+ G RD A LVN DDP  +E+WN V++ ++R +D SL PLPA+HVDTG
Sbjct: 186 GPCGPCSELHYDKIGGRDVAHLVNKDDPMVVELWNNVWMAYDRRADQSLTPLPAQHVDTG 245

Query: 294 LGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADH 353
           +GFERL + LQ+  SNY TD++ P F  IQ+ TG RPY+ K GA+D + +D AYR  ADH
Sbjct: 246 MGFERLVAALQDVSSNYATDIWSPYFRKIQEVTGTRPYTDKYGAEDPETIDTAYRACADH 305

Query: 354 IRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDV 412
           IR L FAIADG+ P NEGR YV+RR+LRR  RY  + L A+ G FF+ ++  ++  MG  
Sbjct: 306 IRMLGFAIADGAVPNNEGRGYVVRRVLRRGARYARKYLNAEIGTFFSRVLPTLIDEMGQQ 365

Query: 413 FPELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTY 469
           FPEL +++  I+EI+  EE +F KTL +G    +KF  AA+    K LSG + + L+DTY
Sbjct: 366 FPELVKKQYDIKEILDEEEEAFAKTLDRGEAQFQKFAGAAEKKGLKKLSGAEVWKLYDTY 425

Query: 470 GFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAI----VMDADATAAL 525
           GFP+DLTQLMAEERGL +D E    A ++ARE S+S ++     AI     +D    A L
Sbjct: 426 GFPVDLTQLMAEERGLQIDDEEVKVAQEKAREASKSVKS-----AIETFPKLDVHGIAEL 480

Query: 526 HKRGVLA-TDDSFKFIWFQDHKSVIKAIYTGSEFIES---VVPGNEVGIVLASSSFYAEQ 581
            ++  +A T+D+ K++   D K  ++ I+ G  F++S   +     + ++L  ++FYAE 
Sbjct: 481 EQQHQIARTNDADKYV-KGDSKGKVQLIFDGKGFVKSTKDIAENTPISVILDKTNFYAEA 539

Query: 582 GGQIFDEG-FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           GGQ+ D G  +      F V +VQ YGG+++H G +   +G  S G+EVIC+ D  RR  
Sbjct: 540 GGQVADTGRLVIDESVEFKVLDVQSYGGYILHHGYIE--SGTLSSGDEVICEYDELRRSP 597

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           I  NHT TH+LN ALREVLG+ V+QKGS+V   KLRFDFSH K V+   L++IE + NE 
Sbjct: 598 IRNNHTGTHILNHALREVLGEDVNQKGSLVDDGKLRFDFSHKKGVEIPELKKIEELSNEY 657

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I+    V++++  L +A+ I+ LRAVFGE YP+PVRVV++G  V+DLL +P+  EW +IS
Sbjct: 658 IRKNQKVYAEDVELEKAREIDTLRAVFGETYPNPVRVVSVGVPVKDLLENPKKPEWRNIS 717

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK 820
            E CGGTH+  T   +   ++ E GIAKGIRRI A T   A++    A  L +++D    
Sbjct: 718 VEFCGGTHVEQTGHIKDLVIVEESGIAKGIRRIIAFTGDAAHQVQREATELARQLDIVEA 777

Query: 821 IEGSLLEKNQVRKAQKKVAEENL 843
           +  S  ++ +V++ Q+ +++  +
Sbjct: 778 LPYSPEKEKEVKEVQQALSKATI 800


>gi|443919032|gb|ELU39327.1| alanyl-tRNA synthetase [Rhizoctonia solani AG-1 IA]
          Length = 939

 Score =  746 bits (1926), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/805 (50%), Positives = 515/805 (63%), Gaps = 54/805 (6%)

Query: 53  PQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADP 112
           P V EWPA +VR  F  FFE + H  W SS  +P +DPTLLFANAGMNQYK IFLGT DP
Sbjct: 41  PNVGEWPANRVRKEFIDFFEARGHKFWASSSTIPYDDPTLLFANAGMNQYKSIFLGTVDP 100

Query: 113 NTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAW 172
           N++LSKL RA N+QKCIRAGGKHN                             EAI WAW
Sbjct: 101 NSELSKLKRAVNSQKCIRAGGKHN-----------------------------EAIAWAW 131

Query: 173 ELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMG 231
           ELLT+VY+LP DRLY TYF GD K GL PD EARDIW    +P   +L    KDNFWEMG
Sbjct: 132 ELLTEVYKLPKDRLYVTYFEGDPKQGLEPDTEARDIWRSVGVPDDHILTGNAKDNFWEMG 191

Query: 232 DTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVD 291
            TGPCGPCSEIHYDR G R+AA LVN DDP  +EIWN VFIQFNRE  G+L+PLPAKHVD
Sbjct: 192 ATGPCGPCSEIHYDRIGGRNAADLVNKDDPDVLEIWNNVFIQFNREDSGALRPLPAKHVD 251

Query: 292 TGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVA 351
           TG+GFERL S+ Q+  SNYDTDVF PIF  IQ+ TGAR Y+GK+GA+DAD +D AYRVVA
Sbjct: 252 TGMGFERLVSVCQDVRSNYDTDVFSPIFARIQELTGARSYTGKLGAEDADGIDTAYRVVA 311

Query: 352 DHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMG 410
           DH+RTL+FA++DG  P N GR YVLRRILRR  RY  +      G FF  LV  VV+ +G
Sbjct: 312 DHVRTLTFALSDGGVPNNVGRGYVLRRILRRGARYVRKKFGVPIGTFFGQLVPAVVEQLG 371

Query: 411 DVFPELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWD 467
           D FPE+ ++   I+EI+  EE SF +TL +G    E + +AA     K L+G+D + L+D
Sbjct: 372 DFFPEITKKVDDIKEILNEEEESFSRTLDRGEKLFENYAQAALSSGAKELNGRDVWRLYD 431

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
           TYGFP+DLT+LMAEE GL V    F  A   ++  S+  + K  G  + +D     +L K
Sbjct: 432 TYGFPVDLTRLMAEELGLGVSDAEFEAAQAASKAASKGGK-KVVGEVVKLDVHDLGSLEK 490

Query: 528 R-GVLATDDSFKFIWFQDHKSVIKAIYTGS-EFIE--SVVPGNEVGIVLASSSFYAEQGG 583
           R  V  T+D  K++   +  + IKAIY  + +FI+  S       GI+L  +  YAE GG
Sbjct: 491 RDDVPKTEDGAKYL-TGNIDAQIKAIYHPTKKFIDSLSSESSESFGILLDKTCMYAESGG 549

Query: 584 QIFDEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLI 641
           Q +D G   I+G+   F V NVQ++ G+V+H G++    G   VG++V+   D  RR  +
Sbjct: 550 QEYDTGSIIIDGV-AEFAVENVQVFNGYVLHTGTMK--YGELKVGDKVVASYDELRRWPL 606

Query: 642 APNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQI 701
             NHT TH+LN++LR+ LGDH+DQKGS+V P KLRFDFSH + +    L +IE   NE +
Sbjct: 607 RNNHTATHILNWSLRDALGDHIDQKGSLVAPTKLRFDFSHKQQLALPELEKIEKSNNEWV 666

Query: 702 KAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISA 761
                V S +  L +   +NGLRAVFGE YPDPVRVVAIG  VED++ DP+N++W S S 
Sbjct: 667 ARNEKVHSADIGLQDGYQVNGLRAVFGEAYPDPVRVVAIGGSVEDIMQDPKNEKWRSASV 726

Query: 762 ELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKI 821
           E CGGTH++ T + ++  +  E GIAKGIRRI AVT   A +    A SL+  ++     
Sbjct: 727 EFCGGTHVNKTGDIKSIIITEESGIAKGIRRIIAVTGHEAAEVTRVADSLKARLE----- 781

Query: 822 EGSLLEKNQVRKAQKKVAEENLQKA 846
               LE+N V    ++++ E L KA
Sbjct: 782 ---ALERNPVDSELRQLSVE-LDKA 802


>gi|171687707|ref|XP_001908794.1| hypothetical protein [Podospora anserina S mat+]
 gi|170943815|emb|CAP69467.1| unnamed protein product [Podospora anserina S mat+]
          Length = 911

 Score =  744 bits (1920), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/916 (46%), Positives = 569/916 (62%), Gaps = 51/916 (5%)

Query: 99  MNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 158
           M Q+KP+FLGT      ++ L RA +TQKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWS
Sbjct: 1   MAQFKPLFLGTVGKTEPMAALKRAADTQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWS 60

Query: 159 FGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWL-KFLPASR 217
           FGDYFK EAI W WELLTKVY L  +RLY TYF G+E  GL PD EA+ +WL + +P   
Sbjct: 61  FGDYFKKEAIGWTWELLTKVYGLDPNRLYVTYFEGNEAMGLEPDLEAKQLWLDQGVPEDH 120

Query: 218 VLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRE 277
           +LP   KDNFWEMGD GPCGPCSE+HYD+ G R+AA LVN DDP  +EIWN VF+Q++R+
Sbjct: 121 ILPGNMKDNFWEMGDQGPCGPCSEVHYDKVGGRNAAHLVNQDDPLVVEIWNNVFMQYDRQ 180

Query: 278 SDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGA 337
            D SLKPLPAKH+DTGLGFERL S LQ+K SNYDTDVF P+F  I + +G+RPYS K G 
Sbjct: 181 KDRSLKPLPAKHIDTGLGFERLVSALQHKSSNYDTDVFAPLFAKIVEVSGSRPYSDKYGK 240

Query: 338 DDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG- 396
           DD D VD A RVVADHIR LSF+IADG+ PGN GR YV+RR+LRR VRY  + L A  G 
Sbjct: 241 DDVDGVDTALRVVADHIRLLSFSIADGAVPGNIGRGYVVRRVLRRGVRYARKYLNANIGS 300

Query: 397 FFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQ 453
           FF+ ++  +V+ MG+ FPELK++EA I+EI+  EE +F  TL +G    EK+  AA    
Sbjct: 301 FFSQILPALVEQMGEQFPELKKKEADIKEILDEEEVAFAVTLDRGEAMFEKYAAAATKAG 360

Query: 454 GKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGG 513
            K LSG D + L+DT+GFP+DLT+LMAEERGL +D E    A ++ARE S++ +      
Sbjct: 361 EKKLSGADVWRLYDTFGFPVDLTKLMAEERGLTIDEEEVKVAQEKAREASKAVKEAVTTF 420

Query: 514 AIVMDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIES---VVPGNEVGI 570
             +     +   + R +  TD   K+   Q  +  I+ I+ GSEFIE+   V P   +GI
Sbjct: 421 PKLTVHHISELENDRNIPRTDSEAKYS-AQSSEGKIQLIFNGSEFIENSKDVPPKTPLGI 479

Query: 571 VLASSSFYAEQGGQIFDEG-FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEV 629
           +L  ++FYAE GGQ+ D G  I      F V + Q +GG+V+H G L    G    G+ V
Sbjct: 480 ILDKTNFYAESGGQVADTGRIIIDDEAEFKVLDTQEFGGYVVHSGFLE--YGNLKAGDVV 537

Query: 630 ICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEH 689
            C+ D  RR+ I  NHT TH+LN ALREVLGD V+Q GS+V  +KLRFDFSH   V    
Sbjct: 538 KCEFDELRRQPIRNNHTGTHVLNHALREVLGDTVNQAGSLVDQDKLRFDFSHKTQVTLPE 597

Query: 690 LRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLA 749
           ++RIE + N  I+  L V++K+  L+EA+ INGLRAVFGE YPDPVRVV++G  VE++L 
Sbjct: 598 IKRIEELSNADIRKNLKVYAKDVALSEAREINGLRAVFGETYPDPVRVVSVGASVEEMLK 657

Query: 750 DPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAAC 809
           DP+N EW   S E CGGTH+  T   +   ++ E GIAKGIRRI A T   A++A + A 
Sbjct: 658 DPKNPEWRQFSVEFCGGTHVDATGLIKDLIIVEESGIAKGIRRIVAYTGAGAHQAQQDAK 717

Query: 810 SLEKEVDDASKIEG--------------------SLLEKNQVRKA----QKKVAEENLQK 845
                +D  + +E                     S+L K ++RK     QK V +E  +K
Sbjct: 718 DFSDRLDHIAALEFGPEKVSLVKAASVDLDALVISVLTKEELRKKFATIQKSVLDEQ-KK 776

Query: 846 AVKVATET---------AEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVF 896
             K  + T         A+    + K F +  + +  +A A+ E V+   + K     V+
Sbjct: 777 RQKAESGTALSTVQKFFADEKNKDAKAF-VGHLPISANAKAISE-VMTYYKSKDKAKSVY 834

Query: 897 STDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQV 956
               + ++AVV  GV   +D  K +   +W  A  + + G+ G GK     G G++  ++
Sbjct: 835 LFAGSKDEAVVH-GVYVGTDL-KGVTAEQWTAAVTEIIGGKTG-GKEPSRQGAGSNPEKL 891

Query: 957 TPAMDLAAEFAAMKLR 972
             A+  A ++   K++
Sbjct: 892 DEAVTKAQQWLEEKMK 907


>gi|83775369|dbj|BAE65489.1| unnamed protein product [Aspergillus oryzae RIB40]
 gi|391864417|gb|EIT73713.1| Alanyl-tRNA synthetase [Aspergillus oryzae 3.042]
          Length = 939

 Score =  743 bits (1917), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 411/878 (46%), Positives = 551/878 (62%), Gaps = 65/878 (7%)

Query: 137 DLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEK 196
           DLDDVGKD+YHHTFFEMLGNWSFGDYFK EAI ++WEL+TK+Y L   RLY TYF G ++
Sbjct: 73  DLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAINYSWELMTKIYGLDPQRLYVTYFEGSKE 132

Query: 197 AGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASL 255
            GL+PD EA+++W    +P   +LP   KDNFWEMGD GPCGPCSEIHYDR G R+A++L
Sbjct: 133 GGLSPDLEAKELWKAVGVPEDHILPGNMKDNFWEMGDQGPCGPCSEIHYDRIGGRNASNL 192

Query: 256 VNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVF 315
           VN DDP  +EIWN VFIQ+NRESD SLKPLP KHVDTG+GFERL S+LQNK SNYDTDVF
Sbjct: 193 VNQDDPNVLEIWNNVFIQYNRESDRSLKPLPNKHVDTGMGFERLVSVLQNKSSNYDTDVF 252

Query: 316 MPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYV 375
            P+F  I+  TGARPY G+ G +DAD +D AYRVVADH+RTL+FAI+DG  P NEGR YV
Sbjct: 253 SPLFQTIKDITGARPYQGRFGVEDADGIDTAYRVVADHVRTLTFAISDGVAPNNEGRGYV 312

Query: 376 LRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASF 434
           +RR+LRR  RY  +  + + G FF+ +V  +V  MGD+FPE+K+++  + EI+  EE SF
Sbjct: 313 IRRVLRRGARYARKYFRVEIGNFFSKIVPTLVDQMGDMFPEVKRKQQDVMEILDEEEISF 372

Query: 435 GKTLLKGIEKFKKAAQDVQGK---VLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEG 491
            KTL +G  +F+  AQ  + K    L G D + L+DT+GFP+DLT++MAEERGL +D   
Sbjct: 373 AKTLDRGERQFEHYAQQAKAKGDDKLHGADVWRLYDTFGFPVDLTRIMAEERGLRIDDTE 432

Query: 492 FNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRG-VLATDDSFKFIWFQDHKSV-- 548
           F  A   A+E S+  Q K A   + +D      L K   V  T+DS KF    D  ++  
Sbjct: 433 FEEARSRAKEASK-GQKKAAADTVKLDVHDLGKLEKMNDVPKTNDSAKF----DRGNITA 487

Query: 549 -IKAIYTGSEF---IESVVPGNEVGIVLASSSFYAEQGGQIFDEG--FIEGLFGSFYVRN 602
            +KAIY G  F    E +  G+++G++L  ++FYAEQGGQ  D G   I+G      V +
Sbjct: 488 QVKAIYHGKSFHLSTEQIPEGDQLGLILDRTNFYAEQGGQENDTGRIVIDGQ-AELEVGD 546

Query: 603 VQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDH 662
           VQ+Y G+V+H G +  G+   SVG+EVIC+ D  RR  I  NHT TH+LNFAL+EVLGD 
Sbjct: 547 VQLYAGYVLHTGFMKYGS--LSVGDEVICEYDELRRWPIRNNHTGTHILNFALKEVLGDG 604

Query: 663 VDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCING 722
           V+QKGS+V  EKLRFDFSH  PV  + L RIE I  E I+    V+S+E  LA A+ I+G
Sbjct: 605 VEQKGSLVAAEKLRFDFSHKSPVTDKDLERIEDISTEYIRQNCAVYSQEVPLATARQISG 664

Query: 723 LRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLS 782
           +RAVFGE YPDPVRVV++G ++E++L + ++  W  +S E CGGTH+  T + +   +L 
Sbjct: 665 VRAVFGETYPDPVRVVSVGVELEEILKNVKDPRWEKVSIEFCGGTHVQKTGDIKELVILE 724

Query: 783 EEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVD--------------------DASKIE 822
           E GIAKGIRRI AVT   A++    A   EK +D                    D S++ 
Sbjct: 725 ESGIAKGIRRIIAVTGEDAHEVQRVALGFEKRLDRLEAMALGPEKEQDAKQIQVDLSQLL 784

Query: 823 GSLLEKNQVR--------------KAQKKVAEENLQKAVKVATETAEAAASNGKPFCISR 868
            S ++K++ R              KAQ+K+     +KA++  T   E   +  K + ++R
Sbjct: 785 ISAVQKSRFRERFAHINKQIIDSQKAQQKLES---KKALEAITSYFENPENKDKSWLVAR 841

Query: 869 VEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLT 928
           + +  +A AV E+ L  ++ K     V+     +N+  V  G       SK    S+W  
Sbjct: 842 LPISANAKAVSES-LNHVKSKLQDKTVYVLAADSNQGRVVHGCY----MSKGASASDW-A 895

Query: 929 AALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEF 966
           A +    G    GKG  + G GT+  +   A+ LA+++
Sbjct: 896 AIVSTAVGGKAGGKGPTSIGNGTNPDKTDEAIALASDY 933


>gi|154288058|ref|XP_001544824.1| hypothetical protein HCAG_01871 [Ajellomyces capsulatus NAm1]
 gi|150408465|gb|EDN04006.1| hypothetical protein HCAG_01871 [Ajellomyces capsulatus NAm1]
          Length = 910

 Score =  736 bits (1901), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 416/954 (43%), Positives = 558/954 (58%), Gaps = 103/954 (10%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           EWPA +VR+ F  FF++  H    SS VVP++DPTLLF NAGMNQYK IFLGT DPN+  
Sbjct: 11  EWPALRVRNAFLDFFKENGHTFVPSSSVVPLSDPTLLFTNAGMNQYKSIFLGTVDPNSDF 70

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
           + L RA N+QKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDYFK EAI ++W+LLT
Sbjct: 71  ATLRRAHNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIRYSWDLLT 130

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
           KVY L   RLY TYF G+  AG+ PD EA+++WL   +    +L    KDNFWEMG+ GP
Sbjct: 131 KVYGLNPARLYVTYFEGNPDAGIGPDLEAKELWLSVGVAEDHLLSGNMKDNFWEMGEQGP 190

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPCSEIHYDR G R+A+ LVN DDP  +EIWN VFIQ+NRE D SL+PLP KHVDTG+G
Sbjct: 191 CGPCSEIHYDRIGGRNASHLVNQDDPNVLEIWNNVFIQYNREPDKSLRPLPNKHVDTGMG 250

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
           +ERL SILQNK SNYDTDVF P+F  I + TG RPY+GK   +D D +D AYRVVADH+R
Sbjct: 251 YERLVSILQNKSSNYDTDVFTPLFGKISEITGCRPYTGKFHDEDTDGIDTAYRVVADHVR 310

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQ-DGFFNGLVNIVVKVMGDVFP 414
           TL+FAI+DG+ P NEGR YV+RR+LRR  RY  + L  +  GFF+ +V  +V  MGD+FP
Sbjct: 311 TLTFAISDGASPNNEGRGYVVRRVLRRGARYARKYLNVEIGGFFSKIVPTLVDQMGDMFP 370

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK---VLSGQDAFILWDTYGF 471
           E+++++  + EI+  EE SF KTL +G   F++ A   + K    L G D + L+DT+GF
Sbjct: 371 EIRRKQTDVMEILDEEEISFAKTLDRGERLFEEYALQAKQKGFGKLHGADVWRLYDTFGF 430

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK-RGV 530
           P+DLT+LMAEERGL +D   F  A  +A+E S+  Q K+    + +       L     V
Sbjct: 431 PVDLTRLMAEERGLTIDNAEFEEARLKAKEASK-GQGKRTADVVKLTVHDLGLLETMEDV 489

Query: 531 LATDDSFKFIWFQDHKSVIKAIYTGSEFIESV--VP-GNEVGIVLASSSFYAEQGGQIFD 587
             T++  KF    +  S IKAIY    F++S   +P G + GI+L  ++FYAEQGGQ  D
Sbjct: 490 PKTNEDAKF-GRGNITSQIKAIYYNKNFVDSTKHIPQGEQFGIILDRTNFYAEQGGQEND 548

Query: 588 EG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            G   I+G      V +VQ+ G  + H GSL                             
Sbjct: 549 TGKIIIDGK-AELAVEDVQVLGDGIEHNGSL----------------------------- 578

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
                                   V  EKLRFDFSH   V    L +IE I  + I+   
Sbjct: 579 ------------------------VAAEKLRFDFSHKSAVSDSDLEKIERISTDYIRQNC 614

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            V++K+  LA A+ I+G+RAVFGE YPDPVRVV++G ++E++L +  +  W  IS E CG
Sbjct: 615 AVYAKDVPLATARGISGVRAVFGETYPDPVRVVSVGVELEEILQNVHDPRWKDISIEFCG 674

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSL-------------- 811
           GTH+  T + +   +L E GIAKGIRRI AVT   A++    A                 
Sbjct: 675 GTHVQKTGDIKDLVILEESGIAKGIRRIIAVTGEEAHEVQRIAKEFGERLRRFEKMELGP 734

Query: 812 EKEVD------DASKIEGSLLEKNQVR-----------KAQKKVAEENLQKAVKVATETA 854
           +KE++      D +++  S +EK + R           + QK   +   +KA+   T   
Sbjct: 735 QKEIEAKLLQVDLNQLSISAVEKARFREQFAQIHKKVLEGQKAAQKLESKKALDAITGYF 794

Query: 855 EAAASNGKPFCISRVEVGLDAAAVREAVLKV-IEQKGMPVMVFSTDETTNKAVV-CAGVP 912
           EA  +   P  + ++ +  +  A+ +++  V  + +   V VF+ D+   K V  C    
Sbjct: 795 EAPENKVAPHLVMQLPISANPKALSDSLNFVKTKMQDKSVYVFAADKEAGKVVHGCHVAQ 854

Query: 913 EKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEF 966
             S+Q      ++W       + GR G GK  ++ G GT+A ++  A+  A E+
Sbjct: 855 ALSEQGAT--PNDWANTVSSIVGGRAG-GKAPISIGNGTEAEKLDEAIKAATEY 905


>gi|156054306|ref|XP_001593079.1| hypothetical protein SS1G_06001 [Sclerotinia sclerotiorum 1980]
 gi|154703781|gb|EDO03520.1| hypothetical protein SS1G_06001 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 936

 Score =  733 bits (1891), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 426/960 (44%), Positives = 581/960 (60%), Gaps = 77/960 (8%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           +W A  VR  F  FFE   H    SS VVP NDPTLLF NAGMNQ+KPIFLGT      +
Sbjct: 9   KWTAPVVRKEFLNFFEKHAHSVVPSSSVVPHNDPTLLFTNAGMNQFKPIFLGTVGKTDDM 68

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
           ++L RA +TQK         DLDDVGKD+YHH+                +AI  AWELLT
Sbjct: 69  AQLKRAVDTQK---------DLDDVGKDSYHHS----------------DAIAMAWELLT 103

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
           KVY L  DRLY TYF GD +  +  D EA+++WLK  +    +L    KDNFWEMG+TGP
Sbjct: 104 KVYGLDPDRLYVTYFEGDSENNVPADTEAKELWLKAGVKEDHILTGNMKDNFWEMGETGP 163

Query: 236 CGPCSEIHYDRTGN-RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           CGPCSEIHYDR G  R+AA LVN DDP  +EIWNIVFIQF+R+ D SLK LPAKH+DTG+
Sbjct: 164 CGPCSEIHYDRIGGGRNAAHLVNQDDPNVLEIWNIVFIQFDRQKDRSLKTLPAKHIDTGM 223

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           G+ERL S+LQ+K SNYDTDVF P+F  IQ+ T ARPY+ K G DD D +D AYRV+ADHI
Sbjct: 224 GYERLVSVLQDKSSNYDTDVFSPLFAKIQEVTQARPYTDKYGKDDTDGIDTAYRVIADHI 283

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG-FFNGLVNIVVKVMGDVF 413
           R L+FAI+DG  P NEGR YV+RR+LRR  RY  +   A+ G FF+ ++  +V+ MG+ F
Sbjct: 284 RLLTFAISDGGVPNNEGRGYVVRRVLRRGSRYARKYFNAEIGSFFSKILPALVEQMGEQF 343

Query: 414 PELKQREAHIREIIAAEEASFGKTLLKGIEKFKK-AAQDVQ--GKVLSGQDAFILWDTYG 470
           PE+ +++  ++EI+  EE +F +TL +G + F+K AAQ ++   K LSG D + L+DT+G
Sbjct: 344 PEIVKKQQDVKEILDEEEEAFARTLDRGEKMFEKYAAQAIKTNTKKLSGADVWRLYDTFG 403

Query: 471 FPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIV-MDADATAALHKRG 529
           FP DLT++MAEERGL  D      A ++ARE S+S   K+A      +D    A L   G
Sbjct: 404 FPEDLTKIMAEERGLETDEGEIEIAKEKAREASKSV--KEAAHTFAKLDVHQIAELDNIG 461

Query: 530 VLATDDSFKFIWFQDHKSVIKAIYTGSEFIESV--VPGNE-VGIVLASSSFYAEQGGQIF 586
           +  T+D  KF    D    ++ IY G  F++S   +P ++  GI+L  ++FYAEQGGQ+F
Sbjct: 462 IARTNDDAKFSK-GDSTGKVQLIYDGKSFLKSTADLPSDKPFGILLDKTNFYAEQGGQVF 520

Query: 587 DEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           D G   I+G+   F V + Q YGG+++H G +    G F  G+EVIC+ D  RR+ I  N
Sbjct: 521 DTGKIIIDGV-AEFKVLDTQAYGGYIVHNGYMD--YGNFKAGDEVICEYDELRRQPIRNN 577

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           HT TH+LN ALRE LG+ ++QKGS+V  EKLRFDFSH   V    L++IE   N  IK  
Sbjct: 578 HTGTHILNHALREHLGEDINQKGSLVDQEKLRFDFSHKAQVTLPELKKIEDSSNSYIKQN 637

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
             ++SK+  L  AK I G+RAVFGE YP+PVRVV++G +++ LLA+P+N EW  +S E C
Sbjct: 638 CKIYSKDVDLDTAKAIEGVRAVFGETYPNPVRVVSVGVEIDVLLAEPKNPEWRKVSVEFC 697

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV--------- 815
           GGTH+  T   +   ++ E GIAKGIRRI A T   A++    A    K +         
Sbjct: 698 GGTHVDQTGIIKDLVIVEESGIAKGIRRIIAYTGDAAHEIQRVASEFGKRIAALDAMPHG 757

Query: 816 -----------DDASKIEGSLLEKNQVR----KAQKKVAEENLQKA---VKVATETAEAA 857
                      +D + +  S+L K  ++    K QK V +E  +K     K A +T  A 
Sbjct: 758 VEKEQEVKATQNDLNHLTISVLTKEDLKKKFTKVQKDVLDEQKKKQKAESKTALDTVTAH 817

Query: 858 ASNGKP----FCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPE 913
            ++ K       I+++ +  ++ A+ E V+   + K     V+    + ++  V  GV  
Sbjct: 818 FADPKNKDSIAYIAQLPISANSKAIAE-VMNHFKSKAKEKTVYLFGGSASEGAVVHGVYV 876

Query: 914 KSD-QSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKLR 972
            +D  SK +   +W  A  + + GR G GK    +GQGT+A ++  A+ +A ++ A KL+
Sbjct: 877 GTDAASKGVSAEQWAAAVSEVIGGRSG-GKEPTRTGQGTNADKIDDAVAVAEKWFAEKLK 935


>gi|224047577|ref|XP_002187191.1| PREDICTED: alanine--tRNA ligase, mitochondrial [Taeniopygia
           guttata]
          Length = 986

 Score =  726 bits (1875), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 414/964 (42%), Positives = 563/964 (58%), Gaps = 62/964 (6%)

Query: 60  ATKVRDTFFKFFEDKN-HVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSK 118
           A ++R  F +FFE+++ H    S+PV P  DP LLF NAGMNQ+KPIFLGT  P ++L++
Sbjct: 33  AGQIRAAFLRFFEERHGHRRLPSAPVRPRGDPRLLFVNAGMNQFKPIFLGTVHPRSELAQ 92

Query: 119 LTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKV 178
             R  N+QKC+RAGGKHNDL+DVG+DTYHHTFFEMLGNWSFGDYFK EA   AWELLT+V
Sbjct: 93  YRRVVNSQKCVRAGGKHNDLEDVGRDTYHHTFFEMLGNWSFGDYFKEEACSMAWELLTEV 152

Query: 179 YRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCG 237
           Y +P DRLY TYFGGD   GL+ D E RD+WL   +PAS VLPF  KDNFWEMGDTGPCG
Sbjct: 153 YEIPRDRLYVTYFGGDPSLGLSADEECRDVWLHLGVPASHVLPFPLKDNFWEMGDTGPCG 212

Query: 238 PCSEIHYDRTGN-RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGF 296
           PC+EIHYD  G  R+AA+LVN   P  +EIWN+VF+Q++RE +G+L PLP  HVDTG+G 
Sbjct: 213 PCTEIHYDHVGGGRNAAALVNQGSPDVVEIWNLVFMQYSREVEGNLLPLPQHHVDTGMGL 272

Query: 297 ERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRT 356
           ERL ++LQNK S+YDTD+F PI DAI +   A  Y G VG  D  +V+MAYRVVADH+RT
Sbjct: 273 ERLVTVLQNKRSSYDTDLFTPILDAIHKVCRAPRYQGLVGNADVGRVNMAYRVVADHVRT 332

Query: 357 LSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPEL 416
           L   I DG  PG  G E VLRRILRRAVR+ SEVL+A  G    LV  VV+V+GD +PEL
Sbjct: 333 LCVCITDGIYPGFSGAELVLRRILRRAVRFCSEVLQAPPGLLASLVPTVVEVLGDAYPEL 392

Query: 417 KQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKV-LSGQDAFILWDTYGFPLDL 475
            +    I++I+   EA+F  +L +G    ++  Q ++       + A+ L+ + GFPLDL
Sbjct: 393 TRNANQIKDILNENEAAFLSSLERGRRIIERTVQQMEPSTNFPAEVAWSLYGSLGFPLDL 452

Query: 476 TQLMAEERGLLVDIEGFNN-AMDEARERSRSAQNKQAGGA-IVMDADATAALHKRGVLAT 533
             LM EE+G+ +D   FN  A+++A+ ++   Q  Q G A   +D  + A L    V  T
Sbjct: 453 IDLMLEEKGISLDSAAFNKLALEDAKRKAGGPQAGQTGTANTRLDVHSLAWLQGSSVPTT 512

Query: 534 DDSFKFIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
           DDS K+ +         F   ++ +  +Y      + V  G   G++L  ++FYAEQGGQ
Sbjct: 513 DDSPKYTYTLGLHGQYEFSPCQATVLMLYKDQSLHKEVGAGQRCGVILDRTNFYAEQGGQ 572

Query: 585 IFDEGFIEGLFGS---FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLI 641
             D+G++  L      F V +V + GG+VIH  +  E       G++V   VD  +R   
Sbjct: 573 DSDQGYMIRLGQQDVLFPVESVHLCGGYVIHEVTAVE---TLRAGDQVQLFVDEAQRLAC 629

Query: 642 APNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQI 701
             NHT TH+L+FALR VLGD  +Q+GS V  ++LRFDF     V  E L+++E +V + I
Sbjct: 630 MRNHTATHLLSFALRRVLGDSTEQRGSHVTAQQLRFDFDTKGHVTVEQLQQVEQVVRDLI 689

Query: 702 KAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISA 761
           +    V   E  L  A+ + GLRAV  E YPDPVR+V++G  VE++L   ++K  +  S 
Sbjct: 690 QKNEVVHMAEVPLTLARRVQGLRAV-DEEYPDPVRIVSLGVPVENVLT-CDSKAAMQTSV 747

Query: 762 ELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDAS-K 820
           ELC GTHL  T   E  A++SE  + KGI R+ AVT G A +A E    L  EVD  S +
Sbjct: 748 ELCCGTHLLQTGSVEDLAIISERQLVKGISRVIAVTGGRAKEAREVGQCLAVEVDSVSLR 807

Query: 821 IEGSLLEKNQVRKAQKKVAE---------------ENLQKAVKVATETAEAAASNGK--- 862
           ++  +    +++   K+V +               + LQ  +K    TA  A    +   
Sbjct: 808 MKQRITSIPEMQNLSKEVGQLTKVVASTAMPQWQRKELQTILKALQRTANTAIKKLELQQ 867

Query: 863 ----------PFCISRVEVGLDAAAVREAVLKVIEQ-----KGMPVMVFSTDETTNKAVV 907
                      +C   V +    A     ++KV+ Q      G  V++ S    T+  V+
Sbjct: 868 AEKVAQILLAKYCNQPVIIDTIPADSLSILMKVVNQLCDKSPGTSVLLLSPQ--TSGEVL 925

Query: 908 CAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFA 967
           CA    KS        ++W  A    ++G+ G G   +A G G +A  +  A+  A EFA
Sbjct: 926 CACQVSKSCLPG-FSAADWAMAVCTQMEGKAG-GSPIVAKGSG-NAKGMQGALTTALEFA 982

Query: 968 AMKL 971
             KL
Sbjct: 983 QSKL 986


>gi|399217153|emb|CCF73840.1| unnamed protein product [Babesia microti strain RI]
          Length = 880

 Score =  724 bits (1868), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/775 (48%), Positives = 501/775 (64%), Gaps = 39/775 (5%)

Query: 59  PATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSK 118
           P+  V+  F  +FE KNH +W  S VVP NDP+LLF NAGMNQ+K I +G  D ++ +SK
Sbjct: 11  PSKVVKSQFINYFESKNHTHWPGSSVVPNNDPSLLFVNAGMNQFKQIIMGQIDKDSGMSK 70

Query: 119 LTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKV 178
           LTRACN+Q+CIRAGGKHNDLDDVGKD+YHHTFFEMLGNWSFGDY K +AI++AW+LL  +
Sbjct: 71  LTRACNSQRCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYLKEDAIDFAWDLLVNI 130

Query: 179 YRLPADRL--YATYFGGD-EKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGP 235
           Y L   RL  YATYFGGD E  GL PD E+RD WLK+LP ++VLPFGCKDNFWEM DTGP
Sbjct: 131 YNLDPTRLVLYATYFGGDPEHKGLPPDLESRDKWLKYLPENKVLPFGCKDNFWEMADTGP 190

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPC+EIHYD  G+RDAA+LVN D P  +E+WN+VF+++NRE +GSLK LP K VDTG+G
Sbjct: 191 CGPCTEIHYDHVGDRDAANLVNADSPEVVELWNLVFMEYNREGNGSLKKLPKKCVDTGMG 250

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQAT-GARPYSGKV-------GADDADKVDMAY 347
           FERL S++    SNYD D+F  I + IQ       PY+GKV       G DD   +D  Y
Sbjct: 251 FERLVSVINGFTSNYDCDMFTTIHNEIQNLLPNIPPYAGKVITLFIKFGTDDKLLIDTTY 310

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RV++DHIR ++ AI+DG  P NEGR YVLRRILRRA+ YG     A + +   L+  V +
Sbjct: 311 RVISDHIRCITIAISDGIEPNNEGRGYVLRRILRRAIVYGKLYFNANEPWLYKLIPTVAE 370

Query: 408 VMGDVFPELK-QREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ-GKVLSGQDAFIL 465
            +     E+   +   +  ++  EE  F  TL KG+EKF K    ++ G ++SG++AF+L
Sbjct: 371 TL-----EISGYKVDKVVTVVKDEEVLFSSTLDKGVEKFNKICNSLKSGDIISGKEAFLL 425

Query: 466 WDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAAL 525
           + ++GFPLDLTQ+MA ER + VD+ GF+ A+ E +  S +  +       ++D  +   +
Sbjct: 426 YSSFGFPLDLTQIMANERNIGVDMVGFDRALLEHQRASEAINSSHDNVNNLIDTLSADVI 485

Query: 526 HK----RGVLATDDSFKFIWFQ------DHKSVIKAIYTGSEFIESVVPGNE---VGIVL 572
           H+     G+  TDDS K+ W             + AI+ G +F + V P +     GIVL
Sbjct: 486 HQIEQYTGIFTTDDSLKYEWSSAEGVGDSFDCKVIAIWDGKQFPQLVNPTSTDGIYGIVL 545

Query: 573 ASSSFYAEQGGQIFDEGFIEGLFGS--FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVI 630
             + FY+E GGQ+ D G    L GS  F V      G +VIH+G +    G+  VG+ + 
Sbjct: 546 DRTPFYSESGGQVSDIGQFT-LNGSVCFNVLKAHKMGSYVIHVGHV---LGKIGVGDVIK 601

Query: 631 CKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHL 690
             V Y+ R   A NHT THMLN+A+R +L D+VDQKGS+V PEKLRFD++  KP++ E +
Sbjct: 602 SCVSYELRCGSAKNHTSTHMLNYAIRRILSDNVDQKGSLVDPEKLRFDYNTSKPLEMEQI 661

Query: 691 RRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLAD 750
             +++ +NE I + L V +    L  A  ING+RAVFGE YP  VR++AIG   +  L +
Sbjct: 662 VTLQNFLNEMISSSLPVSTYVLKLENAMKINGIRAVFGESYPQNVRLLAIGLSGD--LPE 719

Query: 751 PENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAF 805
            E  +   IS ELCGGTH+SNT E  A  +  EEGI+KGIRRIT +T  +A +A 
Sbjct: 720 IEQLDGTKISLELCGGTHVSNTSEIRAIYVTCEEGISKGIRRITCITGKVAMEAM 774


>gi|348545288|ref|XP_003460112.1| PREDICTED: alanyl-tRNA synthetase, mitochondrial-like [Oreochromis
            niloticus]
          Length = 1039

 Score =  723 bits (1866), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 416/968 (42%), Positives = 554/968 (57%), Gaps = 71/968 (7%)

Query: 59   PATKVRDTFFKFFEDKN-HVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLS 117
            PA +VR  F +FF DK+ H+   SSPV P  DP+LLF NAGMNQ+KPIFLGTADP ++++
Sbjct: 88   PAARVRSAFVEFFRDKHGHLPVPSSPVRPRGDPSLLFVNAGMNQFKPIFLGTADPRSEMA 147

Query: 118  KLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTK 177
               R  N+QKC+RAGGKHNDLDDVG+D YHH FFEMLGNWSFGDYFK EA   AW LLT+
Sbjct: 148  SYRRVVNSQKCVRAGGKHNDLDDVGRDGYHHIFFEMLGNWSFGDYFKEEACRMAWSLLTE 207

Query: 178  VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPC 236
             Y +PADRLY +YFGGD  AGL  D + R+IWL+  +P  R+LPFG KDNFWEMGDTGPC
Sbjct: 208  HYGIPADRLYVSYFGGDAAAGLPADEDTRNIWLEIGVPTHRLLPFGLKDNFWEMGDTGPC 267

Query: 237  GPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGF 296
            GPC+EIHYD  G R+ A+LVN D P  +EIWN+VF+Q+NRE D SL+ LP   VDTG+G 
Sbjct: 268  GPCTEIHYDHVGGREVAALVNADSPEVVEIWNLVFMQYNRELDHSLRLLPQVSVDTGMGL 327

Query: 297  ERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRT 356
            ERL S+LQ K SNYDTD+F P+  AI Q +G  PY G++GA D  +VD+AYRVVADHIRT
Sbjct: 328  ERLVSVLQGKTSNYDTDLFTPLLHAIHQRSGVEPYRGRMGAVDVGQVDLAYRVVADHIRT 387

Query: 357  LSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPEL 416
            LS  IADG CPG  G E VLRRILRRAVR+  EVL+A  G    LV  V  ++G+++PEL
Sbjct: 388  LSVCIADGVCPGMSGAELVLRRILRRAVRFCVEVLRAPQGTLASLVPTVADLLGNIYPEL 447

Query: 417  KQREAHIREIIAAEEASFGKTLLKGIEKFKK--AAQDVQGKVLSGQDAFILWDTYGFPLD 474
             Q    I +II   EA F  +L +G    ++  + +D +  V     A+ L    GFPLD
Sbjct: 448  HQETDRIVDIINENEAHFLSSLRQGSRLIERTLSRKDYKRGVFPASVAWSLHRDLGFPLD 507

Query: 475  LTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAG--GAIVMDADATAALHKRGVLA 532
            L  L+ EERG+ VD +  +  + E +   + A   QAG    + +D  +   L + GV  
Sbjct: 508  LVDLILEERGVRVDRQELDRLIAENQ---KVALELQAGDRAQVTLDVLSLTELQRLGVPH 564

Query: 533  TDDSFKFIW--------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
            TDDS K+ +        F    + + A+Y G   +  V  G    ++L  + FYAEQGGQ
Sbjct: 565  TDDSLKYDYHLAEGRYVFPPCHATVLALYDGQGLVSEVSEGQRCSVILDRTCFYAEQGGQ 624

Query: 585  IFDEGFI---EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLI 641
              D+G+    E     F V  V   GG+V+H       A     G+++   +D   R   
Sbjct: 625  SHDQGYFTLDELQDVLFPVEAVVRAGGYVVH---WVTAADNLKTGDQLQLHLDQVHRLSC 681

Query: 642  APNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQI 701
               HT TH+LNFALR+VLG  V Q+GS V  ++LRFDFS    +    L+++E  +N+ I
Sbjct: 682  MVKHTATHILNFALRKVLGASVQQRGSHVSADRLRFDFSVKGSLSVSQLQQVERCINDII 741

Query: 702  KAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISA 761
             A   V S+E  L  A+ I+GLR V  EVYPDPVRVV++   V +LL +   ++    S 
Sbjct: 742  SANQIVHSQELPLQRARGISGLRTV-DEVYPDPVRVVSVEMPVTELLDERSERQ---TSV 797

Query: 762  ELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDAS-- 819
            ELC GTHL  T   E   ++SE+ + KGI RI AVT   A +A EA   L ++VD  S  
Sbjct: 798  ELCCGTHLLQTGAIEDLVIVSEKQLVKGISRIVAVTGQEAARAREAGHVLSQDVDSLSAR 857

Query: 820  ------------------------KIEGSLLEKNQVRKAQKKVAEENLQKAVKVAT---E 852
                                     ++ + + + Q R+ Q ++    LQ+    A    E
Sbjct: 858  LGGSAPSGLDTAQCFSKEVGVLSDAVDNTPIPQWQRRELQSRL--RALQRTSNTAVRKLE 915

Query: 853  TAEAAASNGKPF-CISRVEVGLDAAAVR--EAVLKVIEQ--KGMP---VMVFSTDETTNK 904
            T EAA           R E+ +D         ++K + Q     P   VM+ S    + K
Sbjct: 916  TREAAVQAQALLEKHGRTELLVDLVETNSLSVLMKTVNQLSSAAPLSHVMLLSHQRYSGK 975

Query: 905  AVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAA 964
             +    VP+    S  L  S+W  A  + L G  G G   +A G G ++  +T A+  A 
Sbjct: 976  VLCACQVPKV---SPSLVASDWAVAVCRHLDGSAG-GSEVVAKGTG-NSNDITEALRWAK 1030

Query: 965  EFAAMKLR 972
             FA+ +++
Sbjct: 1031 AFASQRMQ 1038


>gi|291228549|ref|XP_002734240.1| PREDICTED: alanyl-tRNA synthetase-like [Saccoglossus kowalevskii]
          Length = 1016

 Score =  721 bits (1860), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/831 (45%), Positives = 520/831 (62%), Gaps = 45/831 (5%)

Query: 62  KVRDTFFKFFEDK-NHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLT 120
           ++R  F  +F++K +H+   SS V+P  D TLLF NAGMNQ+K IF G  DP++ + K  
Sbjct: 55  EIRRKFIDYFKEKQSHLFVPSSSVIPREDKTLLFTNAGMNQFKSIFQGAVDPSSPIVKYR 114

Query: 121 RACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYR 180
           R  N+QKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFGDYFK E  E AW+LL  VY 
Sbjct: 115 RVVNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKETCEMAWDLLINVYG 174

Query: 181 LPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGPC 239
           L ++RLY TYFGG+++ GL+PD E R+IW    +   R+LP+G  +NFWEMG  GPCG C
Sbjct: 175 LSSNRLYVTYFGGNQQLGLSPDIECRNIWKNIGVAEDRILPYGMNENFWEMGTIGPCGMC 234

Query: 240 SEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERL 299
           SEIHYDR GNR+A SL+N DDP+ +E+WN+VFIQ+NRE DG L  LP  ++DTG+G ERL
Sbjct: 235 SEIHYDRIGNRNATSLINKDDPSVLELWNLVFIQYNREEDGCLSKLPQHNIDTGMGLERL 294

Query: 300 TSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSF 359
            SI+Q   SNYDTD+F P+   IQ+ T   PY G VG  D + +DMAYRV+ADHIRTL+ 
Sbjct: 295 VSIIQGVDSNYDTDLFQPLIQEIQKCTSMPPYQGLVGDSDNENIDMAYRVLADHIRTLTI 354

Query: 360 AIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQR 419
           AI DG+ PGN  + Y+++R++RRAVRY +E L A  G F  LV IVV  +GD +PEL   
Sbjct: 355 AITDGARPGNFKQSYIIKRLIRRAVRYATEKLNASPGQFASLVPIVVDTLGDAYPELLTN 414

Query: 420 EAHIREIIAAEEASFGKTLLKGIEKF--KKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQ 477
              + ++I  EE  F K L KG  KF  KK ++  + ++L G  A+ ++D +GFP+DLT 
Sbjct: 415 PQQVIDVINREEDLFLKQLKKG-RKFLDKKISKLKEPRILPGDIAWKMYDGFGFPIDLTI 473

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSA--QNKQAGGAIVMDADATAALHKRGVLATDD 535
           LM  E+G+ VD+EG+    ++  + +     +N+   G    D +A   L  + +  TDD
Sbjct: 474 LMCNEKGVSVDMEGYEEVKEKTHQITSQGGIKNQLEYG---FDTNALQQLKHQNISTTDD 530

Query: 536 SFKFIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           S+K+ +         F+   + I ++  G +F+ESV P     ++L  + FYAEQGGQ++
Sbjct: 531 SYKYSYECDDDGNYEFEVITAKITSLRVGGQFVESVEPDQSCDVILHQTCFYAEQGGQLW 590

Query: 587 DEGFIEGLFGS-----FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLI 641
           D+G+   L        F V NVQIYGG+V+H G+  +     SVGE++   ++ +RR  +
Sbjct: 591 DDGYFTKLGDEAQQIVFEVDNVQIYGGYVVHSGTTKK---TLSVGEQLKLHINEERRLGL 647

Query: 642 APNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQI 701
             NHT  H+LN++LR + GD ++Q+GS+V P++LRFDF++   +    ++ I+  VNE I
Sbjct: 648 MRNHTAAHILNWSLRHLHGDGIEQRGSLVAPDRLRFDFTYEDSLTSLQVKEIQDQVNEVI 707

Query: 702 KAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISA 761
           +    V S+E  L EAK I GLRAVFGEVYPDPV+VV++G  V  LL +P          
Sbjct: 708 EQYTPVDSQEVELDEAKQIEGLRAVFGEVYPDPVQVVSVGIPVTGLLTNPFGPGGFMSPV 767

Query: 762 ELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKI 821
           ELCGGTH+  T       ++ E  ++ G+RRITA+T    ++A       +++ DD    
Sbjct: 768 ELCGGTHVHMTEHIGKLVIIDEGKVSSGVRRITAITGSDGWEA-------DRKADD---- 816

Query: 822 EGSLLEKNQVRKAQKKVAEENLQKAVKV----ATETAEAAASNGKPFCISR 868
              LL K    K Q + + ENL  +++V    A    E   ++  P   SR
Sbjct: 817 ---LLVKVSELKKQIEESIENLTPSLRVLFDEANNLLEVVGASPIPLWRSR 864


>gi|115610688|ref|XP_797369.2| PREDICTED: alanine--tRNA ligase, cytoplasmic [Strongylocentrotus
            purpuratus]
          Length = 1041

 Score =  719 bits (1855), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 418/994 (42%), Positives = 572/994 (57%), Gaps = 82/994 (8%)

Query: 42   ASAVAAMPGADPQVVEWPATKVRDTFFKFFEDKN-HVNWKSSPVVPVNDPTLLFANAGMN 100
             SA +  PG     ++  A++VR  F   F+  N HV   SS V+P  DPTLLF NAGMN
Sbjct: 62   TSAGSLRPGQSKDFLQ--ASQVRKKFLDHFQGLNDHVFVPSSSVIPYGDPTLLFTNAGMN 119

Query: 101  QYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFG 160
            Q+K IF GT  P+   +   R  N+QKCIR GGKHNDLDDVGKDT HHTFFEMLGNWSFG
Sbjct: 120  QFKDIFQGTIHPDMVQNCYRRVVNSQKCIRVGGKHNDLDDVGKDTTHHTFFEMLGNWSFG 179

Query: 161  DYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVL 219
            D+FK EA   A +LLT VY LP + LY TYF G+ +  L  D   R IWL   +P  RVL
Sbjct: 180  DFFKKEACTMALDLLTSVYGLPLENLYFTYFKGNSELQLGADEATRQIWLDLGVPEDRVL 239

Query: 220  PFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESD 279
            PFG  DNFWEMG  GPCGPC+EIH+DR GNR+A+ LVN  DP  +EIWN+VF+QF R   
Sbjct: 240  PFGMADNFWEMGAVGPCGPCTEIHFDRHGNRNASHLVNLGDPDVLEIWNLVFMQFYRNEA 299

Query: 280  GSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADD 339
            GSL  LP  HVDTG+G ERL SILQ   S+YDTD+F P+   +++    RPY G +G  D
Sbjct: 300  GSLHDLPKHHVDTGMGLERLVSILQGVPSSYDTDLFQPLIKRLEETCPVRPYQGLLGEKD 359

Query: 340  ADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFN 399
             D +D AYR VADH R L+ AIADG  P ++ R YV++R++RRAVRY +E L+A  G   
Sbjct: 360  QDHIDTAYRAVADHARMLTVAIADGCRPDSQKRGYVIKRVIRRAVRYATEKLQAPPGALG 419

Query: 400  GLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK-VLS 458
             LV++VV  +G+ +PEL++   +I ++I  EE  F  TL KG +  KKA  ++  + VL 
Sbjct: 420  SLVHLVVISLGNTYPELEEDPVYIADVINNEEEQFLTTLKKGEKYLKKAITELSSQTVLP 479

Query: 459  GQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARE-RSRSA-QNKQAGGAIV 516
            G  A+ ++D YGFPLDLT L+A+E GL VDIEGF  +  E++E  SR   +N+Q    I 
Sbjct: 480  GDIAWKMYDAYGFPLDLTTLIADENGLGVDIEGFEKSRLESKEITSRGGIKNQQNLSNIK 539

Query: 517  MDADATAALHKRGVLATDDSFKFIWFQDHK----------SVIKAIYTGSEFIESVVPGN 566
            ++    + LH+  V  TDDS+K+  +Q H+          + I A+ T   F+E    G 
Sbjct: 540  LETTDISHLHELSVKDTDDSYKY-NYQHHRRGKYTFPRIHAHILALKTPKGFVECAASGE 598

Query: 567  EVGIVLASSSFYAEQGGQIFDEG-FI----EGLFGSFYVRNVQIYGGFVIHIGSLTEGAG 621
            E  I+L  ++FYAEQGGQ +DEG F+    E L  S Y  +VQ YGG+V+H+G+  E   
Sbjct: 599  ECAIILDRTTFYAEQGGQQWDEGSFVSADDEELMFSVY--DVQSYGGYVLHLGTTAETV- 655

Query: 622  RFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSH 681
              S+G+ V   V+ +RR+ +  NHT TH+LNFALR+VLG H++QKGS V P++ RFDF+ 
Sbjct: 656  --SIGDHVTLYVNEERREKLMRNHTGTHILNFALRQVLG-HIEQKGSSVAPDRFRFDFNA 712

Query: 682  GKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIG 741
             K +    L++I SI N  I   L V  +   L +A  I GLR + GE YPDPV VV IG
Sbjct: 713  EKSISDRQLQQISSIANNLISNSLPVHQESIPLQKALTIEGLRTMTGETYPDPVTVVCIG 772

Query: 742  RKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTG-- 799
             +   L  D   K  +  S ELCGGTH+ NT       ++SE+ ++KG+RR+T VT+   
Sbjct: 773  HQDGQLNGD-MTKLGMETSLELCGGTHVKNTGHIRRLVIVSEKLVSKGVRRLTVVTSNDV 831

Query: 800  -----LAYKAFEAACSLEKEVDDASK--------------------IEGSLLEKNQVRKA 834
                  + K  +    LE EV + S                     +EG+ ++  + R+ 
Sbjct: 832  MLADYTSNKFLQRLSQLETEVYNVSTSNNPEMRDDVIASLESLVEDLEGAHIDLWKKREM 891

Query: 835  QKKVA--EENLQKAVK---------VATETAEAAASNGKPFCISRVEVGLDAAAVREAVL 883
             ++VA  +  L+KA K         VA    E         C+    VG+   ++   VL
Sbjct: 892  NRRVADMQNKLKKADKLNKKSVIKQVAKRLHEEFREKKSEVCL----VGVTGDSIDNKVL 947

Query: 884  KVIEQK------GMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGR 937
              ++Q         P+M+ STD+   KA     VP++   S+ L  S+W+ + +  ++G+
Sbjct: 948  LKVQQSLEDEFGSTPLMLLSTDK--EKAYCICRVPQEL-VSRGLHASQWMDSVMGEMEGK 1004

Query: 938  CGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
             G G    A G+G   + +      A  +   +L
Sbjct: 1005 -GFGSETFARGRGLAPSSLEECAKKARSYVVQRL 1037


>gi|71895377|ref|NP_001026227.1| probable alanyl-tRNA synthetase, mitochondrial [Gallus gallus]
 gi|53136426|emb|CAG32542.1| hypothetical protein RCJMB04_28n18 [Gallus gallus]
          Length = 816

 Score =  712 bits (1837), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/802 (47%), Positives = 502/802 (62%), Gaps = 35/802 (4%)

Query: 56  VEWPATKVRDTFFKFFEDKN-HVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNT 114
           V  PA ++R  F +FFE+K+ H    S+PV P  DPTLLF N+GMNQ+KP+FLGTA P +
Sbjct: 27  VRPPAGQIRAAFLRFFEEKHGHRCLPSAPVRPRGDPTLLFVNSGMNQFKPVFLGTAHPRS 86

Query: 115 QLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWEL 174
           +L++  R  N+QKC+RAGGKHNDL+DVG+DTYHHTFFEMLGNWSFGDYFK EA   AWEL
Sbjct: 87  ELAQQRRVVNSQKCVRAGGKHNDLEDVGRDTYHHTFFEMLGNWSFGDYFKEEACSMAWEL 146

Query: 175 LTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDT 233
           LT+VY++P DRLY TYFGGD   GL  D E RD+WL   +PA+ VLPF  KDNFWEMGDT
Sbjct: 147 LTEVYKIPKDRLYVTYFGGDSSLGLNADEECRDVWLSLGVPANHVLPFPMKDNFWEMGDT 206

Query: 234 GPCGPCSEIHYDRTGN-RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDT 292
           GPCGPC+EIHYD  G  R+A++LVN   P  +EIWN+VF+Q++RE DG+L PLP  HVDT
Sbjct: 207 GPCGPCTEIHYDHVGGGRNASALVNQGSPDVVEIWNLVFMQYSREVDGNLLPLPQHHVDT 266

Query: 293 GLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVAD 352
           G+G ERL ++LQNK SNYDTD+F PI DAI +  G   Y G VG  D   VDMAYRVVAD
Sbjct: 267 GMGLERLVTVLQNKRSNYDTDLFTPILDAIHKGCGGPRYQGLVGNADVGHVDMAYRVVAD 326

Query: 353 HIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDV 412
           H+RTL   I DG  PG  G E VLRRILRRAVR+ +EVL A  G    LV  VV+V+GD 
Sbjct: 327 HVRTLCVCITDGIYPGLSGAELVLRRILRRAVRFCAEVLHAPRGLLASLVPAVVEVLGDA 386

Query: 413 FPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKV-LSGQDAFILWDTYGF 471
           +PELK+    + +I    E +F  +L +G    ++  Q ++       + A+ L+   GF
Sbjct: 387 YPELKKNADQVMDIFNENEVAFLSSLERGRRIIERTVQQMKPSADFPAEVAWSLYGNLGF 446

Query: 472 PLDLTQLMAEERGLLVDIEGFNN-AMDEARERSRSAQ-NKQAGGAIV-MDADATAALHKR 528
           PLDL  LM EE+G+ +D   FN   +++A+ ++   Q  +Q  G +V +D  + A L + 
Sbjct: 447 PLDLIDLMLEEKGIRLDSAAFNELVLEDAKRKAHGPQEGRQLEGTVVHLDVHSMAQLQRD 506

Query: 529 GVLATDDSFKFIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYA 579
            + ATDDS K+ +         F   ++ I  +Y      + V  G   G++L  ++FYA
Sbjct: 507 NIPATDDSPKYSYKLGQHGQYEFSPCQATILMLYRDQSLQKEVGAGQHCGVILDRTNFYA 566

Query: 580 EQGGQIFDEGFIEGLFGS---FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYD 636
           EQGGQ  D G++  L      F V +V++ GG+VIH  +  E       G++V   VD  
Sbjct: 567 EQGGQASDRGYLIRLGQQDILFPVESVRLCGGYVIHEVTAVE---TLRAGDQVQLFVDEV 623

Query: 637 RRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESI 696
           +R     NHT TH+LNFALR VLGD  +Q+GS V  E+LRFDF+   PV  E L+++E +
Sbjct: 624 QRLACMTNHTATHLLNFALRHVLGDSTEQRGSHVTAEQLRFDFNIKGPVTVEQLQQVEQV 683

Query: 697 VNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEW 756
           V + IK    V+  E  LA A+ + GLRA   E YPDPVR+V++G  VE +L    ++  
Sbjct: 684 VQDVIKRNEAVYMAEVPLALARRVQGLRA-LDEGYPDPVRIVSLGVPVETVLTS-NSQAA 741

Query: 757 LSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVD 816
           +  S ELC GTHL  T   E  A++SE  + KGI R+ AVT   A +A E    L  EVD
Sbjct: 742 MQTSVELCCGTHLLQTGAMEDLAIVSERQLVKGISRVIAVTGRQAKQAREVGQCLAMEVD 801

Query: 817 DASKIEGSLLEKNQVRKAQKKV 838
             S           +R  QK++
Sbjct: 802 SVS-----------IRMKQKRI 812


>gi|428673262|gb|EKX74175.1| alanyl-tRNA synthetase, putative [Babesia equi]
          Length = 952

 Score =  711 bits (1834), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/777 (48%), Positives = 488/777 (62%), Gaps = 47/777 (6%)

Query: 63  VRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRA 122
           VR  F K+FE K HV+W S+ V+P NDPTLLF NAGMNQ+K I +G +D +T+  +L R 
Sbjct: 7   VRSEFIKYFEKKGHVHWPSASVLPCNDPTLLFVNAGMNQFKDIIMGKSDESTEFGRLRRV 66

Query: 123 CNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLP 182
            N+QKCIRAGGKHNDLDDVG D YH+TFFEMLGNWSFGDYFK EAIE+A+ELLT VY L 
Sbjct: 67  ANSQKCIRAGGKHNDLDDVGHDCYHNTFFEMLGNWSFGDYFKKEAIEYAFELLTTVYGLD 126

Query: 183 ADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPCSEI 242
            DRLY TYFGGD K    PD+EAR IW+++LP  R+LPFG KDNFWEM D GPCGPCSEI
Sbjct: 127 KDRLYVTYFGGDPKISCPPDDEARKIWMQYLPEERILPFGLKDNFWEMADVGPCGPCSEI 186

Query: 243 HYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSI 302
           HYD  GNRDAASLVN DDP  +EIWN+VF+Q+NR+SDG+L+PLP   VDTG+G ERL ++
Sbjct: 187 HYDHVGNRDAASLVNADDPQVVEIWNLVFMQYNRKSDGTLEPLPRPCVDTGMGLERLCAV 246

Query: 303 LQNKMSNYDTDVFMPIFDAIQQATGARP-YSGKVGADDADKVDMAYRVVADHIRTLSFAI 361
           L    SNYD DV   + + I +     P YSG +       VD AYRVVADH+R L+ AI
Sbjct: 247 LLGSSSNYDADVLSTVMNVIHEKVPGLPAYSGSLNI-----VDTAYRVVADHVRCLTIAI 301

Query: 362 ADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREA 421
           ADG  P N+GR YVLRRILRRAVRY  E L     F + LV+ +V   GD + E+ + + 
Sbjct: 302 ADGVYPSNDGRGYVLRRILRRAVRYAREHLGVDGPFLHTLVDSLVNTYGDAYKEVVENKD 361

Query: 422 HIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ----------GKVLSGQDAFILWDTYGF 471
            ++ II  EE  F KTL KG E+F++  +  Q            ++S QDAF+L+ +YGF
Sbjct: 362 IVKSIIHEEEELFLKTLDKGRERFRRMIKQAQQASPDGSTSGQAIVSAQDAFLLYSSYGF 421

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAAL-----H 526
           PLDLT LMA+E G+ VD +GF   + + +E+S    NK    A ++++ +   L     H
Sbjct: 422 PLDLTVLMAKEYGVGVDTDGFKEELKKHQEKSDRRVNKDDAFANLLESLSADKLDVISKH 481

Query: 527 KRGVLATDDSFKFIWF------QDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAE 580
             GVL TDDS K+ W       Q   + + AI+T    ++ V   +   +V   + FYAE
Sbjct: 482 CNGVL-TDDSAKYQWSSEDPKEQIFDAKVLAIWTEGG-LQDVQDADVFALVTDVTPFYAE 539

Query: 581 QGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
            GGQI+DEGFI+    +  V  V    G V H    T G      G  V  +VDYDRR  
Sbjct: 540 GGGQIYDEGFID----TCQVHKVYKMSGLVFHF--CTAGDTPIHAGSTVKMRVDYDRRVK 593

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           +A NHTCTH+LNF LR++  D   Q+GS +  EKL+FDF+    +  + L+ IE  +   
Sbjct: 594 VACNHTCTHLLNFVLRDINKD-TKQRGSQLDAEKLKFDFNGSGALSEDVLQEIERKLANF 652

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I  EL+V +K     EA  I+G+RA F E YP+ VRVV++G+            + LS S
Sbjct: 653 ISKELEVVTKSIPYKEALEISGIRANFDEKYPEIVRVVSVGK-----------DDGLSTS 701

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDD 817
            E+CGGTHL NT+  ++  ++ EEGI+KG+RR+T VT   +  A       E  +D+
Sbjct: 702 IEVCGGTHLGNTKTIQSAYVIGEEGISKGVRRLTLVTNAQSATAASNLKHFETSLDN 758


>gi|49119610|gb|AAH73734.1| LOC443692 protein, partial [Xenopus laevis]
          Length = 1005

 Score =  710 bits (1832), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/945 (41%), Positives = 551/945 (58%), Gaps = 65/945 (6%)

Query: 60  ATKVRDTFFKFFEDKN-HVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSK 118
           A  +R  F ++F++K+ H +  SS V P  DP+LLF NAGMNQ+KPIFLGTADP + +++
Sbjct: 54  AAAIRRAFLRYFQEKHGHRHVPSSSVRPRGDPSLLFVNAGMNQFKPIFLGTADPRSDMAQ 113

Query: 119 LTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKV 178
             R  N+QKC+RAGGKHNDL+DVG+D YHHTFFEMLGNWSFGDYFK EA   AW+LLT+ 
Sbjct: 114 YRRVVNSQKCVRAGGKHNDLEDVGRDVYHHTFFEMLGNWSFGDYFKEEACSMAWQLLTQG 173

Query: 179 YRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCG 237
           Y +P DRLY TYFGG+   GL+ D E ++IWL   +P +R+LPFG K+NFWEMG+TGPCG
Sbjct: 174 YGIPEDRLYVTYFGGEPTLGLSADQETQEIWLSLGVPPARLLPFGLKENFWEMGETGPCG 233

Query: 238 PCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFE 297
           PC+EIHYD  G R+AASLVN D P  +EIWN+VF+Q+NRESD SL+ LP +HVDTG+G E
Sbjct: 234 PCTEIHYDHVGGRNAASLVNQDSPDVVEIWNLVFMQYNRESDRSLRLLPQQHVDTGMGLE 293

Query: 298 RLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTL 357
           RL ++LQ K SNYDTD+F PI +AI + + A  Y G +G +D +  DMAYRVVADHIRTL
Sbjct: 294 RLVTVLQGKRSNYDTDLFSPILEAIMKGSRAPQYQGLMGKEDTEHTDMAYRVVADHIRTL 353

Query: 358 SFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELK 417
              IADG  PG  G E VLRRILRRAVR+ SE+L+A   F + LV  VV V+G+ FPEL+
Sbjct: 354 CVCIADGVYPGMSGAELVLRRILRRAVRFSSEILRAPPLFLSSLVPSVVHVLGEAFPELE 413

Query: 418 QREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDLT 476
           + ++ I  I+   E +F  +L +G     +  Q   + +      A+ L    GFPLDL 
Sbjct: 414 REKSQIMNILNENEEAFLISLQQGRRIIDRTLQQQEEPQTFPVGVAWSLHRNLGFPLDLI 473

Query: 477 QLMAEERGLLVDIEGFNN-AMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDD 535
            LM EERG+ +D    ++  ++EA  + R+ Q  +A   + +D  + A L +RGV  T+D
Sbjct: 474 GLMLEERGISLDKAAMDHLTVEEAERKMRNQQADEAQTGLELDVHSMAELQRRGVPCTND 533

Query: 536 SFKFIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           S K+ +         F   ++ +  +Y        +  G   G++L  + FYAEQGGQ  
Sbjct: 534 SPKYNYTLAADGKYVFGPCRATVLMLYKDHSLHSEIDKGQRCGVILDQTCFYAEQGGQSC 593

Query: 587 DEGFI------EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           D+G+       E LF    V +VQ+ GG+++H  +  E      VG++++  +D   R  
Sbjct: 594 DQGYFVRKDQQEALFP---VESVQVAGGYMLHEVTTPE---VLRVGDQLVLYLDEAHRLA 647

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
               HT TH+LN+ L +VLG++  Q+GS V  E+LRFD S   PV  E L+ +E ++ + 
Sbjct: 648 CMQKHTATHLLNYTLHQVLGENTVQRGSHVTAERLRFDVSVTAPVHVEQLQEVEQVLQDL 707

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I  + ++ +    L  AKC+ GLR V  E YP+PVRVV++G  V D+   P ++  L  S
Sbjct: 708 ISQDEEIHTALVPLTAAKCVRGLRTV-DEAYPNPVRVVSVGIPV-DVALKPGSQAALQTS 765

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK 820
            ELC GTHL  T   +   ++SE  +AKGI R+ A+T   A +A E    L + V+  ++
Sbjct: 766 VELCCGTHLLTTGAIQDVVIVSERPLAKGITRLIAITGEEAKQARETGHELVRAVESITE 825

Query: 821 -------------------------IEGSLLEKNQVRKAQKKVA--EENLQKAVKVATET 853
                                    ++ + + + Q ++ Q K+   + N    ++     
Sbjct: 826 RMKTKPLSLNEGFHLSKEVGILTDSVDSATMPQWQRKELQAKLKALQRNANTNIRKLEVK 885

Query: 854 AEAAASNGKPFCISRVEVGLDAAAVR--EAVLKVIEQ-----KGMPVMVFSTDETTNKAV 906
             A  + G     SR  + +D  +V     ++KV+ Q      G  VM+FS  ++     
Sbjct: 886 QAAVIAQGLLKKHSRCSLIIDKVSVESLSMLVKVVNQVCDGSPGASVMLFSKQDSEKVFC 945

Query: 907 VCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGT 951
            C  VP+ S    +L  +EW T     + G  G G   +A G GT
Sbjct: 946 ACQ-VPKGS--GSELSAAEWATTVCSEMGGNAG-GSDVVAKGTGT 986


>gi|221057404|ref|XP_002261210.1| alanine--tRNA ligase [Plasmodium knowlesi strain H]
 gi|194247215|emb|CAQ40615.1| alanine--tRNA ligase, putative [Plasmodium knowlesi strain H]
          Length = 1180

 Score =  707 bits (1826), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 414/980 (42%), Positives = 569/980 (58%), Gaps = 94/980 (9%)

Query: 60   ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
            A +VR  F  +F++K H   +S+ V+P ND TLLF NAGMNQ+K IFLG  D N+ L KL
Sbjct: 193  AEEVRGRFINYFKEKKHTVMESASVIPYNDNTLLFTNAGMNQFKKIFLGQVDKNSDLGKL 252

Query: 120  TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
             RA +TQKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFGDYFK E+I++AW+LLT VY
Sbjct: 253  KRAVDTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKEESIDYAWDLLTNVY 312

Query: 180  RLPADRLYATYFGGDEK-AGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGP 238
            ++  +RLY TYFGGDEK  G   D EA+ IWLK+L  SR+LPFG K+NFWEM +TGPCGP
Sbjct: 313  KIDPNRLYVTYFGGDEKLPGCPEDFEAKRIWLKYLDESRILPFGMKENFWEMAETGPCGP 372

Query: 239  CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
            CSEIHYDR G RDA+SLVN DDP+ +EIWNIVF+Q+N++   ++  LP   +DTG+G ER
Sbjct: 373  CSEIHYDRIGGRDASSLVNMDDPSVLEIWNIVFMQYNKDEKKNMNKLPFPCIDTGMGLER 432

Query: 299  LTSILQNKMSNYDTDVFMPIFDAIQQATGARP-YSGKVGADDADKVDMAYRVVADHIRTL 357
            +TSILQN  SNYDTD+FMPIF  I++     P Y GKV  +D  ++D AYRVV+DHIR +
Sbjct: 433  ITSILQNVESNYDTDLFMPIFKQIKEIFNHLPEYGGKVNEEDVGRIDYAYRVVSDHIRCV 492

Query: 358  SFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG--FFNGLVNIVVKVMGDVFPE 415
            + AI+DG  PGNEGR YV+RRI+RRA+R G ++ + +    +F  LV+ V +++   F +
Sbjct: 493  TIAISDGCLPGNEGRNYVIRRIIRRAIRVGKQIFQVESNVLWFYKLVDSVCQILKKCFTD 552

Query: 416  LK--QREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG----KVLSGQDAFILWDTY 469
            L+   R  +I+ II  EE  F KTL KG+++F K  +        K+ +G+DAF L+ +Y
Sbjct: 553  LQDENRVNYIKSIIKQEEMVFNKTLEKGVDQFNKIIKKSNNAGGDKIFNGKDAFDLYTSY 612

Query: 470  GFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRG 529
            GFP+DL Q+M EE+   +++  FN    + +  S +   K      +    A     K G
Sbjct: 613  GFPIDLIQIMCEEKNFKLNMFEFNELFKKHQLVSDTNNFKINKFFDLPVEKAHELKEKHG 672

Query: 530  VLATDDSFKFIWFQDHK--------SVIKAIYTGSEFIESVVPGNE---VGIVLASSSFY 578
            V AT+D  K+ W  D +        + I  IY G  FI+S+   N+     ++L  ++FY
Sbjct: 673  VEATEDHHKYEWNNDDRRNDMKKVDTNIVVIYDGENFIDSIKTPNDDKKYALILKETNFY 732

Query: 579  AEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRR 638
             E GGQI+D G IE     F V NVQ    +V+HIG L E  G+    + V   V++DRR
Sbjct: 733  YENGGQIYDTGVIENGQMKFQVLNVQKMNDYVLHIGILKE--GKIEKNDSVHTYVNFDRR 790

Query: 639  KLIAPNHTCTHMLNFALREVLGDHV------------------------------DQKGS 668
            KL+A NHT TH+LNF +++VL ++V                              DQKGS
Sbjct: 791  KLVACNHTATHLLNFVIKKVLTEYVVNGEGQMKNGDLVQKKNEKEETGMNSIFNCDQKGS 850

Query: 669  VVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFG 728
            +V  EKLRFDFS  + +  + + +IES VN+ IK EL V  +   L E+K I G+RA+F 
Sbjct: 851  LVDDEKLRFDFSFFQNISDDLVSKIESQVNDLIKQELSVSVRTMDLKESKKIKGIRAIFE 910

Query: 729  EVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAK 788
            E Y D V VV I   V+ +L   +       S ELCGGTH++NT+  + F + SEE I K
Sbjct: 911  EDYADVVNVVFIDNDVDKILNHLDVNYSYMCSIELCGGTHIANTKFIKKFIITSEESIGK 970

Query: 789  GIRRITAVTTGLAYKA---FEAACSLEKEV-DDASKIEGSLLE----------------- 827
            GI RI AVT   A +    F+   +  K + +D +  EG L E                 
Sbjct: 971  GIYRINAVTNRKAEEVEAKFDNLYAKYKHIFEDPN--EGKLAEVQTYKRILKEDKFLPYI 1028

Query: 828  -KNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISR-----VEVGL-DAAAVRE 880
             KN++    +K+ +  ++K   +  E    A + GK + +       V+V L DA    +
Sbjct: 1029 RKNEILNKLEKIEKNIIEKTKNMQKELFNKATAIGKDYALEDKSGVLVDVKLFDALCGNQ 1088

Query: 881  AVLKVIEQ-----KGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLK 935
             VL+ I Q       +    F  D+  N    C    + S +   ++   ++   +Q ++
Sbjct: 1089 KVLEKIAQSYCKHNKLCSYFFIIDDEKN--TYCVFEMKDSLKGITIQADTFMKEIMQSVE 1146

Query: 936  GRCGKGK----GGLASGQGT 951
            G  G GK    G  A G+G 
Sbjct: 1147 GHSGGGKNKAFGSAAKGKGV 1166


>gi|156101531|ref|XP_001616459.1| alanyl-tRNA synthetase [Plasmodium vivax Sal-1]
 gi|148805333|gb|EDL46732.1| alanyl-tRNA synthetase, putative [Plasmodium vivax]
          Length = 1197

 Score =  704 bits (1818), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 412/976 (42%), Positives = 570/976 (58%), Gaps = 92/976 (9%)

Query: 62   KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
            +VR  F  +F++KNH   +S+ V+P ND TLLF NAGMNQ+K IFLG  D ++ L KL R
Sbjct: 212  EVRGGFINYFKEKNHTVVESASVIPYNDNTLLFTNAGMNQFKKIFLGQVDKSSDLGKLKR 271

Query: 122  ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
            A +TQKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFGDYFK E+I++AW+LLT VY++
Sbjct: 272  AVDTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKEESIDYAWDLLTNVYKI 331

Query: 182  PADRLYATYFGGDEKAGLAPDN-EARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPCS 240
              +RLY TYFGGDEK    P++ E + IWLK++  SR+LPFG K+NFWEM DTGPCGPCS
Sbjct: 332  DPNRLYVTYFGGDEKLASCPEDLETKKIWLKYVDESRILPFGMKENFWEMADTGPCGPCS 391

Query: 241  EIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLT 300
            EIHYDR GNRDA+SLVN DDP+ +EIWNIVF+Q+N++   ++  LP   +DTG+G ER+T
Sbjct: 392  EIHYDRIGNRDASSLVNKDDPSVLEIWNIVFMQYNKDEKKNMNKLPFPCIDTGMGLERIT 451

Query: 301  SILQNKMSNYDTDVFMPIFDAIQQATGARP-YSGKVGADDADKVDMAYRVVADHIRTLSF 359
            SILQN  SNYDTD+FMPIF  I++     P Y GKV  +D D++D AYRVV+DHIR ++ 
Sbjct: 452  SILQNVESNYDTDLFMPIFKQIKEIFNYLPEYGGKVNEEDVDRIDYAYRVVSDHIRCVTI 511

Query: 360  AIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG--FFNGLVNIVVKVMGDVFPELK 417
            AI+DG  PGNEGR YV+RRI+RRA+R G ++ +      +F  LV+ V  ++   F +LK
Sbjct: 512  AISDGCLPGNEGRNYVIRRIIRRAIRVGKQIFQVGSNVLWFYKLVDSVCHILNKCFTDLK 571

Query: 418  --QREAHIREIIAAEEASFGKTLLKGIEKFKKAAQ--DVQG--KVLSGQDAFILWDTYGF 471
               R  +I+ +I  EE  F +TL KG+++F K  +  +  G   + SG+DAF L+ +YGF
Sbjct: 572  DEDRVNYIKSVIKQEEMVFNRTLEKGVDQFNKIIKRGNTSGGDNLFSGKDAFDLYTSYGF 631

Query: 472  PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
            P+DL Q+M EE+   +++  FN    + +  S +   K      +    A     K GV 
Sbjct: 632  PIDLVQIMCEEKNFKLNMTEFNELFRKHQLVSDTNNFKINKFFDLPVEKAHELKEKHGVA 691

Query: 532  ATDDSFKFIWFQ-DHKSV-------IKAIYTGSEFIESVVPGNE---VGIVLASSSFYAE 580
            AT D +K+ W   D K+V       +  IY G  F++S+   +E     ++L  ++FY E
Sbjct: 692  ATVDHYKYEWNNADGKNVMAKVDTGVVVIYDGENFLDSIETASEDKKYALILRETNFYYE 751

Query: 581  QGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
             GGQI+D G I+     F V NVQ    +V+HIG L E  G+    + V   V++DRRKL
Sbjct: 752  NGGQIYDTGVIQNEQMKFEVVNVQKMNEYVLHIGVLQE--GKIQKNDCVHTVVNFDRRKL 809

Query: 641  IAPNHTCTHMLNFALREVLGDHV------------------------------DQKGSVV 670
            +A NHT TH+LNF +++VL ++V                              DQKGS+V
Sbjct: 810  VACNHTATHLLNFVIKKVLTEYVMHSKGGAQNGDLAHTPNEKEQTGGNSIFNCDQKGSLV 869

Query: 671  LPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEV 730
              EKLRFDFS  + V  E + +IES VN+ I+ EL V  +   L E+K I G+RA+F E 
Sbjct: 870  DDEKLRFDFSFFQNVSDELVSKIESQVNDLIRQELSVSVRTMDLKESKKIKGIRAIFEED 929

Query: 731  YPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGI 790
            Y D V VV I   V+ +L   +       S ELCGGTH++NT+  + F + SEE I KGI
Sbjct: 930  YADVVNVVFIDNDVDKILNHLDVNYSYLCSIELCGGTHIANTKFIKKFVITSEESIGKGI 989

Query: 791  RRITAVTTGLAYKA---FEAACSLEKEVDDASKIEGSL------------------LEKN 829
             RI AVT   A +    F+   +  K + D    EG L                  + KN
Sbjct: 990  YRINAVTNKKAEEVEAKFDDLLAKYKHIFDDPN-EGKLADVQTYKRVLKEDKFLPYIRKN 1048

Query: 830  QVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISR-----VEVGL-DAAAVREAVL 883
            Q+    +K+ +  ++K   +  E    A + GK + +       ++V L DA +  + VL
Sbjct: 1049 QILHNLEKIEKNIIEKTKNMQKELFNKATTIGKDYALEDKSGVLLDVKLFDALSGNQKVL 1108

Query: 884  KVIEQ-----KGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRC 938
            + I Q       +    F  D+  N    C    + S +   ++   ++   +Q ++G  
Sbjct: 1109 EKIAQSYCKHNKLCSYFFIIDDEKN--TYCVFEVKDSLKGTSIQADAFMKEIMQSVEGHS 1166

Query: 939  GKGK----GGLASGQG 950
            G GK    G  A G+G
Sbjct: 1167 GGGKNKAFGSAAKGKG 1182


>gi|327262296|ref|XP_003215961.1| PREDICTED: alanyl-tRNA synthetase, mitochondrial-like [Anolis
           carolinensis]
          Length = 988

 Score =  703 bits (1815), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 417/963 (43%), Positives = 564/963 (58%), Gaps = 62/963 (6%)

Query: 60  ATKVRDTFFKFFEDK-NHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSK 118
           + +VR +F +FF++K  H    SSPV P  DP LLF NAGMNQ+KPIFLGTADP +++++
Sbjct: 37  SARVRQSFIRFFQEKYGHQVVASSPVRPRADPGLLFVNAGMNQFKPIFLGTADPRSEMTR 96

Query: 119 LTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKV 178
             R  N+QKC+RAGGKHNDL+DVG+D YHHTFFEMLGNWSFGDYFK EA + AWELLT+V
Sbjct: 97  YRRVVNSQKCVRAGGKHNDLEDVGRDVYHHTFFEMLGNWSFGDYFKEEACKMAWELLTEV 156

Query: 179 YRLPADRLYATYFGGDEKAGLAPDNEARDIWL-KFLPASRVLPFGCKDNFWEMGDTGPCG 237
           Y +P D LY TYFGG+   GL+ D E R+IWL + L  S VLPF  KDNFWEMGD+GPCG
Sbjct: 157 YEIPKDHLYVTYFGGNAALGLSADEETREIWLNQGLSPSHVLPFEMKDNFWEMGDSGPCG 216

Query: 238 PCSEIHYDRTGN-RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGF 296
           PC+EIHYD  G  R+AA++VN  +P  +EIWN+VF+Q+NRE+DG L  LP  HVDTG+G 
Sbjct: 217 PCTEIHYDHIGGGRNAAAMVNKGNPDVVEIWNLVFMQYNREADGRLHQLPQHHVDTGMGL 276

Query: 297 ERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRT 356
           ERL +ILQNK SNYDTD+F PI DAI +  G   Y G VG  DA  V+MAYRVVADH+RT
Sbjct: 277 ERLMTILQNKRSNYDTDLFTPILDAIHKGCGGPNYQGLVGEADAGGVNMAYRVVADHVRT 336

Query: 357 LSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPEL 416
           LS  IADG  PG  G E VLR ILRRAVR+ SEVL A  GF   LV +VV+++GD +PEL
Sbjct: 337 LSICIADGVYPGMSGAELVLRHILRRAVRFCSEVLHAPPGFLANLVPVVVEILGDAYPEL 396

Query: 417 KQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDL 475
            +    +  II+  EA+F  +L++G     +A Q +   KV   + A+ L+   GFPLDL
Sbjct: 397 HRDTDKVMNIISENEAAFLSSLMQGRHVINRALQQMDHSKVFPVEIAWSLYSNLGFPLDL 456

Query: 476 TQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDD 535
             LM EE+G+ +D    +    E  ER   +Q +Q+   +++D  + A L + GV +TDD
Sbjct: 457 IALMLEEKGVQLDKAALDCLAQEDAERKARSQQEQS-ARMLLDVHSLAQLRRDGVPSTDD 515

Query: 536 SFKFIW---------FQDHKSVIKAIYTGSEFIESVVPGNE-VGIVLASSSFYAEQGGQI 585
           SFK+ +         F+  K+ +  +Y      + V  G +  G++L  + FYAEQGGQ 
Sbjct: 516 SFKYAYEIGKDGRYVFKQCKATVLMLYKDGSLQKEVSGGGQRCGVLLDQTCFYAEQGGQA 575

Query: 586 FDEGFI--EGLFGSFY-VRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIA 642
            D+G++   G   +F+ V +VQ+  G+VIH    +E       G++V   VD   R    
Sbjct: 576 PDQGYMVCGGQQDTFFPVVSVQVSAGYVIHEVIASEA---LKAGDQVQLFVDEAHRMACM 632

Query: 643 PNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIK 702
            NHT TH+LNF LR+VLG+  +Q GS V  E LRFD     PV  EHL+ +E+++ E IK
Sbjct: 633 VNHTATHLLNFVLRQVLGESTEQCGSHVTAEHLRFDVRTQVPVKTEHLQEVENVIQEIIK 692

Query: 703 AELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAE 762
               V ++E  L     I GLR    +VYPD VRVV++G  V+  L   E+K+ +  S E
Sbjct: 693 KNEVVCTEEVPLKLTSDIQGLRK-LDDVYPDVVRVVSVGVPVKRALVR-ESKDAMHTSVE 750

Query: 763 LCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDAS--- 819
           LC GTHL  T   + F ++SE  + KGI  I A+T   A KA E   +  KEV+  +   
Sbjct: 751 LCCGTHLLRTGAIQDFTIISERQLVKGISHIIALTGEQAKKAREDGRTFAKEVESLTIRV 810

Query: 820 KIEGSLLEKNQV--------------------RKAQKKVAEENLQKAVKVAT---ETAEA 856
           K+ G+ +++ Q                     +K + +   + LQ+A   A    ET  A
Sbjct: 811 KLGGATIDEAQRLSKEVGYLTVTVYNTAMPHWQKRELQATLKALQRAANTAVRKLETRLA 870

Query: 857 AASNGKPFC-ISRVEVGLDAAAVREA--VLKVIEQ-----KGMPVMVFSTDETTNKAVVC 908
           A    K     SR  + +D  AV     ++KV+ Q         VM+ S    T+  V C
Sbjct: 871 AEEAHKLLAKYSREAIIVDTIAVESPSILMKVVNQLCAKIPAASVMLLSPQ--TSGQVFC 928

Query: 909 AGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAA 968
           A    K+        S+W  +    + G+ G G   +A G G +   +  A+  A E+A 
Sbjct: 929 ACQVSKNSLPT-FSASDWALSVCTQMGGKSG-GSEVVAKGMG-NTNGLQRALATAQEYAK 985

Query: 969 MKL 971
            K+
Sbjct: 986 DKI 988


>gi|83316024|ref|XP_731046.1| alanyl-tRNA synthetase [Plasmodium yoelii yoelii 17XNL]
 gi|23490961|gb|EAA22611.1| alanyl-tRNA synthetase, putative [Plasmodium yoelii yoelii]
          Length = 1218

 Score =  698 bits (1801), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 412/1029 (40%), Positives = 576/1029 (55%), Gaps = 132/1029 (12%)

Query: 60   ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
            + +VR+ F  +F++KNH    S+ V+P ND TLLF NAGMNQ+K IFLG  D N+ L KL
Sbjct: 192  SEQVRNNFINYFKNKNHTVVDSASVIPYNDNTLLFTNAGMNQFKKIFLGNVDKNSDLGKL 251

Query: 120  TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
             R  +TQKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFGDYFK E+IE+AW+LLT VY
Sbjct: 252  KRCVDTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKEESIEYAWDLLTNVY 311

Query: 180  RLPADRLYATYFGGDEK-AGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGP 238
            ++  DRLY TYFGGD+      PD EA+ IW K+L   R+LPFG KDNFWEM +TGPCGP
Sbjct: 312  KINPDRLYVTYFGGDKNLPSCPPDLEAKKIWSKYLDEKRILPFGMKDNFWEMAETGPCGP 371

Query: 239  CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
            CSEIHYDR GNRDA+ LVN DDP+ +EIWNIVF+Q+N++ + ++  LP+  +DTG+G ER
Sbjct: 372  CSEIHYDRIGNRDASDLVNKDDPSVLEIWNIVFMQYNKDENKNMNKLPSPCIDTGMGLER 431

Query: 299  LTSILQNKMSNYDTDVFMPIFDAIQQA-TGARP-YSGKVGADDADKVDMAYRVVADHIRT 356
            +TSILQN  SNYDTD+F PIF  I++    + P Y GK+  +D DK+D AYRV++DHIR 
Sbjct: 432  ITSILQNVQSNYDTDLFTPIFKQIKEIFNNSIPSYQGKINEEDPDKIDYAYRVISDHIRC 491

Query: 357  LSFAIADGSCPGNEGREYVLRRILRRAVRYGSEV--LKAQDGFFNGLVNIVVKVMGDVFP 414
             + AI+DG  P NEGR YV+RRI+RRAVR G +V  +K+   +F  LV+ V K++G+ F 
Sbjct: 492  ATIAISDGCIPSNEGRNYVIRRIIRRAVRVGKQVFNIKSNVLWFYKLVDSVCKILGNCFK 551

Query: 415  ELKQREA--HIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ------GKVLSGQDAFILW 466
            +L+  E   +I+ +I  EE  F KTL KG+++F K  +           + SG+DAF L+
Sbjct: 552  DLQNEEKVNYIKNVIMQEELIFNKTLEKGVDQFNKIIKKCHQNPSNSNNLFSGKDAFDLY 611

Query: 467  DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
             +YGFP+DL ++M EE+ + +++E F N + +  +      N +    I +  +    + 
Sbjct: 612  TSYGFPIDLIEIMCEEKNVKLNMEEF-NTLFKKHQLISDTNNFKINKVIDLPVEKAHEIK 670

Query: 527  -KRGVLATDDSFKFIW---FQD------------HKSVIKAIYTGSEFIESVVPGNEV-- 568
             K  VL T D  K+ W   F+D             KS ++ IY G+   E V   NE   
Sbjct: 671  CKYNVLPTIDYHKYNWNNTFEDIKSKEENKNNLRLKSSVQIIYDGNFLDELVYTDNETKE 730

Query: 569  --------------GIVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIG 614
                           ++L  ++FY E GGQI+D GFI+     F V NVQ    +++HIG
Sbjct: 731  PSSCEKTENEQKKYALILKETNFYYENGGQIYDTGFIQNESMKFQVLNVQKMNDYILHIG 790

Query: 615  SLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVD---------- 664
             L  G+ + +   E +  VD++RRKLIA NHT TH+LNFALR+VL D ++          
Sbjct: 791  VLLSGSIKKNDVIETV--VDFERRKLIACNHTATHLLNFALRKVLEDQMNQTKNKCDNKD 848

Query: 665  ------------------------------------QKGSVVLPEKLRFDFSHGKPVDPE 688
                                                QKGS+V  EKLRFDFS  + ++ +
Sbjct: 849  ENKKGSLEDSSAIKNKLEGNSSCNNNSNGSSIFNCEQKGSLVDDEKLRFDFSFIQNINMD 908

Query: 689  HLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLL 748
             L +IE+ +N  +K ELDV  K   L E+K I G+RA+F E Y D V VV I +  +++L
Sbjct: 909  VLNKIETEINNIVKEELDVSIKTMDLTESKKIKGIRAIFEEDYSDKVNVVFISKNADNVL 968

Query: 749  ADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLA---YKAF 805
             + +       S ELCGGTH+ NT+  + F + SEE I KGI RI AVT   A    K F
Sbjct: 969  NNLDINYTYLCSIELCGGTHIGNTKYIKEFIITSEESIGKGIHRINAVTNKKAEEINKKF 1028

Query: 806  EAACSLEKEV-DDASKIEGS----------------LLEKNQVRKAQKKVAEENLQKAVK 848
            +   +  K V DD ++ + +                L++KN++ +  + + ++ ++K   
Sbjct: 1029 DDLVAKYKHVFDDPNENKLTDVQNYKRILKEDKFLPLIKKNKILEDLEIIEKDIVEKKKN 1088

Query: 849  VATETAEAAASNGKPFCI-SRVEVGLDAAAVRE--AVLKVIEQ---------KGMPVMVF 896
               E    A   GK +   ++  + LD     E     KV+E+         K +     
Sbjct: 1089 AQKELFNKAMGLGKLYATENKDNILLDIKLFTEINGNQKVLEKVGQAYTKANKNLSYFFI 1148

Query: 897  STDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQV 956
              DE       C      S + K+++   ++   ++ + G  G GK       G D    
Sbjct: 1149 IHDENN---TYCVLEIRDSLKGKEMQAETFMKQVMESVGGHSGGGKNKAFGSAGKDKG-- 1203

Query: 957  TPAMDLAAE 965
              A+  AAE
Sbjct: 1204 -TAIKQAAE 1211


>gi|124514064|ref|XP_001350388.1| alanine--tRNA ligase, putative [Plasmodium falciparum 3D7]
 gi|23615805|emb|CAD52797.1| alanine--tRNA ligase, putative [Plasmodium falciparum 3D7]
          Length = 1408

 Score =  695 bits (1794), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/823 (45%), Positives = 504/823 (61%), Gaps = 84/823 (10%)

Query: 60   ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
            A +VR+ F  +F  KNH   +SS VVP ND TLLF NAGMNQ+K IFLG AD N+ L KL
Sbjct: 391  AEEVRNNFINYFHKKNHTIIESSSVVPYNDNTLLFTNAGMNQFKKIFLGNADKNSDLGKL 450

Query: 120  TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
             RA +TQKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFGDYFK E+I +AW+LLT VY
Sbjct: 451  KRAVDTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKEESISFAWDLLTNVY 510

Query: 180  RLPADRLYATYFGGDEKAGLAP-DNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGP 238
            ++  DRLY TYFGGDE     P D+E + IW+K++   R+LPFG K+NFWEM +TGPCGP
Sbjct: 511  KINPDRLYVTYFGGDENLSTCPADHETKKIWMKYISEDRILPFGLKENFWEMAETGPCGP 570

Query: 239  CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
            CSEIHYDR GNRDA+SLVN DDP+ +EIWNIVF+Q+N++ + ++  LP   +DTG+G ER
Sbjct: 571  CSEIHYDRIGNRDASSLVNKDDPSVLEIWNIVFMQYNKDENKNMNKLPFPCIDTGMGLER 630

Query: 299  LTSILQNKMSNYDTDVFMPIFDAIQQATGARP-YSGKVGADDADKVDMAYRVVADHIRTL 357
            +TSILQN  SNYDTD+F PIF  I++     P Y GK+   D DK+D AYRV++DHIR +
Sbjct: 631  ITSILQNVDSNYDTDLFQPIFKQIKELFPYLPNYEGKINEQDVDKIDTAYRVISDHIRCV 690

Query: 358  SFAIADGSCPGNEGREYVLRRILRRAVRYGSEV--LKAQDGFFNGLVNIVVKVMGDVFPE 415
            + AI+DG  P NEGR YV+RRI+RRA+R+G +V  +K+   +F  LV+ V  ++G+ F +
Sbjct: 691  TVAISDGCLPSNEGRNYVIRRIIRRAIRFGKQVFNIKSNVLWFYKLVDSVCFILGNTFKD 750

Query: 416  LKQREA--HIREIIAAEEASFGKTLLKGIEKFKK-AAQDVQGKVLSGQDAFILWDTYGFP 472
            L+  +    I+  I  EE  F KTL KG+E+F K   ++ +  + SG+DAF L+ ++GFP
Sbjct: 751  LQNPDKINFIKNTIKQEEMVFNKTLEKGVEQFHKIIKKNTKNNIFSGKDAFDLYTSFGFP 810

Query: 473  LDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK-RGVL 531
            +DL Q+M EE+   +D++ FN+   + +  S    N +      +  + +  L     + 
Sbjct: 811  IDLIQIMCEEKSFNLDLQEFNDLFKKHQLVS-DTNNFKINKFFDIPVEKSHELKNVHNIN 869

Query: 532  ATDDSFKFIWFQ------DHKSV-----IKAIYTGSEFIES-VVPGN------------- 566
             T D FK+ W        D+K +     ++ IY G+ F+++  +P N             
Sbjct: 870  PTVDHFKYEWNNNCANDGDNKDIKFETYVQVIYDGNNFLDNFTLPSNNDEQVLEKEKSIE 929

Query: 567  ----EVGIVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGR 622
                +  ++L  ++FY E GGQI+D G I+     F V NVQ    +V+HIG   +G   
Sbjct: 930  ENKKKYALILKETNFYYENGGQIYDTGIIQNDNMKFQVLNVQKINEYVLHIGVFLKGY-- 987

Query: 623  FSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDH-------------------- 662
             S  ++V   VD+DRRKL+A NHT THMLNF LR+VL +                     
Sbjct: 988  VSKNDKVQTIVDFDRRKLVACNHTATHMLNFMLRKVLTEKYTNSGKSSKTHEGNNEKHEM 1047

Query: 663  ------------------------VDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVN 698
                                     +QKGS+V  EKLRFDFS  + ++ + + +IE+ +N
Sbjct: 1048 SENDINSNNNYDNNKEEKGFSIFTCEQKGSLVDDEKLRFDFSFIENINIDAITKIENEIN 1107

Query: 699  EQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLS 758
            + IK EL+V  K   L E+K I G+RA+F E Y D V VV I + V ++L +        
Sbjct: 1108 KLIKEELNVTVKTMDLDESKKIKGIRAIFEEDYADKVNVVFINKDVNNILNNMNIDYTYL 1167

Query: 759  ISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLA 801
             S ELCGGTH+ NT+    F + SEE I KGI RITAVT   A
Sbjct: 1168 HSIELCGGTHIGNTKLIRKFLVTSEESIGKGIYRITAVTNKKA 1210


>gi|340382452|ref|XP_003389733.1| PREDICTED: alanyl-tRNA synthetase, cytoplasmic-like [Amphimedon
           queenslandica]
          Length = 936

 Score =  694 bits (1792), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/986 (41%), Positives = 546/986 (55%), Gaps = 114/986 (11%)

Query: 36  LISRFSASAVAAMPGADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFA 95
           LI RF +     +P     V+   A ++R  F  +F+ K H    SS  +P ND TL F 
Sbjct: 2   LIRRFYSH----LPSTGGNVLT--AKEIRRIFINYFQSKGHTFVPSSSTLPHNDQTLSFT 55

Query: 96  NAGMNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLG 155
           NAGMNQ+KPIF GT DP++  ++L+RA N QKCIRAGGKHNDLD VGKDTYHHTFFEMLG
Sbjct: 56  NAGMNQFKPIFQGTIDPSSDFARLSRAVNYQKCIRAGGKHNDLDVVGKDTYHHTFFEMLG 115

Query: 156 NWSFGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LP 214
           NWSFGDYFK EAIE AW  LT    L  DRLY TYFGGDEK  L PD+E R IW+   L 
Sbjct: 116 NWSFGDYFKKEAIEMAWSFLTDTLNLSKDRLYVTYFGGDEKLNLPPDDECRGIWINLGLS 175

Query: 215 ASRVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQF 274
             RVLPF   DNFWEMGDTGPCGPC+EIHYDR G R AA+LVN +DP  +E+WNIV +QF
Sbjct: 176 PERVLPFSVNDNFWEMGDTGPCGPCTEIHYDRIGGRFAANLVNMNDPDVLELWNIVIMQF 235

Query: 275 NRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGK 334
           NRE+DGS+K LP  ++DTGLG ER+ S++QNK SNYDTD+F+PIFDAIQQ TG R Y G+
Sbjct: 236 NREADGSIKRLPRNYIDTGLGLERIVSVVQNKFSNYDTDLFVPIFDAIQQKTGFRGYGGR 295

Query: 335 VGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQ 394
           VGA+D D +DMAYRVVADHIRTL+ AI+DG  P   G  +VLR+IL+R V Y +  L A+
Sbjct: 296 VGAEDIDGIDMAYRVVADHIRTLTVAISDGGRPATRGSNHVLRQILKRGVYYLTNKLNAK 355

Query: 395 DGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG 454
              F  LV  VV ++G+ +PEL +    + +II  EE  F K+L  G  KF++A Q V  
Sbjct: 356 PCTFASLVPTVVDILGEAYPELTKDPERVMDIINEEEEHFLKSLSIGRIKFEEALQKVDN 415

Query: 455 KVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA 514
            +L G     L    G  +DL QLMA+ER + VDIEGF  A  +A  +       +   +
Sbjct: 416 NILPGDVLCDLHIDTGLTIDLIQLMADERQVRVDIEGFKKA--KALRQEHGGWISRPETS 473

Query: 515 IVMDADATAALHKRGVLATDDSFKFIWFQDH---------KSVIKAIYTGSEFIESVVPG 565
           +  D  A      +G+  TDD  K+ +  D           S I A+    EF++ V  G
Sbjct: 474 VQFDVHAIDYFTSKGLPPTDDIPKYNYSSDEFGNYSFPSCTSSIIALKQNGEFVDEVTSG 533

Query: 566 NEVGIVLASSSFYAEQGGQIFDEGFI--EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRF 623
             VG+    + FYAEQGGQ+ D+GFI   G    F V +VQ+ GG+V+H+G+ +EG  R 
Sbjct: 534 QSVGVFTDKTCFYAEQGGQVCDKGFIVKTGEETKFMVNDVQVGGGYVMHVGT-SEGTLR- 591

Query: 624 SVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGK 683
                                              +GD VD                +G 
Sbjct: 592 -----------------------------------VGDTVDM-------------IINGN 603

Query: 684 PVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRK 743
            V    ++  E I  E IKA   V++KEA L   K I GLR +  E+YP+PVRV++IG  
Sbjct: 604 SVTANKIKECEEIALEIIKANHPVYAKEAPLPIVKEIKGLRVINAEIYPNPVRVLSIGVP 663

Query: 744 VEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYK 803
           V+ L+ DP        S E C GTHL+ T   ++F ++SEEG  +G RRI A+T   A K
Sbjct: 664 VDKLVEDPSGPWGTEYSVEFCCGTHLNLTSHIDSFVIVSEEGSGEGFRRIVALTGTEAIK 723

Query: 804 AFEAACSLEKEVD------------------DASKIEGS---LLEKNQVRKAQKKVAEEN 842
           A E A  +++ V                   +A ++ G    +L+ + + K +K   +  
Sbjct: 724 AHERAAVVQERVSKLCSDVFRDIVEKTITPQEARELIGKELFVLQSDVISKWKKVELQNK 783

Query: 843 LQKA-----------VKVATE---------TAEAAASNGKPFCISRVEVGLDAAAVREAV 882
           L  A           +  A E           +   +N  PF + ++E+   +  +R A+
Sbjct: 784 LNTAKKSTKKAKKVMLNFAAEKCNGHIQELVGQFDKTNPPPFVVEKLEIKGSSMVIRAAM 843

Query: 883 LKVIE-QKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKG 941
            +       +P ++ S D   +K +  A VPE +  +K L+ +EWL +    + G+ G G
Sbjct: 844 YEFKSLAPSIPAVLLSVDHENDKFICVASVPEGA-VAKGLKANEWLQSISSTIDGKAG-G 901

Query: 942 KGGLASGQGTDAAQVTPAMDLAAEFA 967
               AS  GT+  +++ A+D+A ++A
Sbjct: 902 NENSASISGTNFDKLSNAVDVAKQYA 927


>gi|84998104|ref|XP_953773.1| alanyl-tRNA synthetase [Theileria annulata]
 gi|65304770|emb|CAI73095.1| alanyl-tRNA synthetase, putative [Theileria annulata]
          Length = 1024

 Score =  692 bits (1786), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/797 (45%), Positives = 495/797 (62%), Gaps = 38/797 (4%)

Query: 63  VRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRA 122
           VR  F  +F  KNHV+W SS V+P NDPTLLF NAGMNQ+K I +G +D N++  KL   
Sbjct: 82  VRKQFIDYFVSKNHVHWPSSSVLPNNDPTLLFVNAGMNQFKDIIMGKSDENSEFGKLKMV 141

Query: 123 CNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLP 182
           CN+QKCIRAGGKHNDLDDVG+D YH T+FEMLGNWSFG YFK EAI +AW+LLT VY+L 
Sbjct: 142 CNSQKCIRAGGKHNDLDDVGQDCYHQTYFEMLGNWSFGAYFKEEAISYAWDLLTNVYKLD 201

Query: 183 ADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPCSEI 242
            +RLY TYFGGD+   +  DNE R+IWLKF+PASR+LPFG KDNFWEM DTGPCGPC+EI
Sbjct: 202 PNRLYVTYFGGDKSCEV--DNETREIWLKFMPASRILPFGSKDNFWEMADTGPCGPCTEI 259

Query: 243 HYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSI 302
           HYD  G RDA++LVN DDP  +EIWNIVF+Q+NR  +G L+ LP   VDTG+G ERL S+
Sbjct: 260 HYDHIGGRDASTLVNADDPNVVEIWNIVFMQYNRGENGVLERLPKGCVDTGMGLERLCSV 319

Query: 303 LQNKMSNYDTDVFMPIFDAIQQAT-GARPYSGKVGADDADKVDMAYRVVADHIRTLSFAI 361
           L N  SNY+TD+   I   I++   G   Y G         +D+AYRVV+DH+R LS AI
Sbjct: 320 LNNTNSNYNTDLLNDIIQYIRELLPGFESYKG-----GNTPLDVAYRVVSDHVRCLSVAI 374

Query: 362 ADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREA 421
           +D   P NEGR YVLRRILRRAVRY  +    ++ F   LV  V K++G+ +P L   +A
Sbjct: 375 SDKVYPSNEGRGYVLRRILRRAVRYCRDYFNTKEPFLYKLVPSVTKLLGNAYPNLLTEQA 434

Query: 422 HIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQLMAE 481
           +I  I+  EE  F +TL KG+EKFKK       KV++G DAF+L+ +YGFPLDLT LMA 
Sbjct: 435 NIESIVLDEEKLFLQTLDKGVEKFKKMVSKSGNKVINGPDAFLLYQSYGFPLDLTMLMAR 494

Query: 482 ERGLLVDIEGFNNAMDEARERS--------RSAQNKQAGGAIVMDADATAALHKR-GVLA 532
           E G+ VD++G+ + +   +++S         S +++       + AD    + K    + 
Sbjct: 495 ELGITVDVDGYYSELKLHQQKSESRVYTDLNSLESRCDKLLKSLSADRINTILKMCNNVY 554

Query: 533 TDDSFKFIWFQDH--KSVIKAIYTGSEFIESVVP------GNEVGIVLASSSFYAEQGGQ 584
           TDD  K+ W        V KA    +  ++SV+        + V +V+  + FYAE GGQ
Sbjct: 555 TDDKLKYDWDSSDPVAKVYKAKLVSTVTLDSVMSELQCDDDDLVCLVMDRTPFYAEGGGQ 614

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           I+D G+I  L     V  V    G V H   L++ +G    G+E   KVDY+RR  +A N
Sbjct: 615 IYDTGYINDL----EVLRVYKMSGLVFHF-CLSKKSGVLRCGDEFELKVDYERRVRVASN 669

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           HT TH+LNF LR++L +   Q+GS +  EKL+FD+ + + +  + +RRIE  + + +++E
Sbjct: 670 HTSTHILNFVLRDMLDESSYQRGSQLDEEKLKFDYCYNQQLPEDLIRRIEDRMMDFVRSE 729

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
             + ++E     A  I G+RA F E YP+ VRVV +    ED   +         S E+C
Sbjct: 730 APLRTREIEYKNALEIPGIRANFDEKYPEVVRVVNVQLGSEDFSGE-------HTSTEVC 782

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK-IEG 823
           GGTHL+NT+  +  A++ EEGI+KG+RR+T VT     K+       EK +++  K ++ 
Sbjct: 783 GGTHLTNTKTIQDVAVVGEEGISKGVRRLTLVTNEQCRKSKADLLHYEKRLEELEKNLKP 842

Query: 824 SLLEKNQVRKAQKKVAE 840
               K+  R+A    AE
Sbjct: 843 INFTKDDTREASLNAAE 859


>gi|403221365|dbj|BAM39498.1| alanyl-tRNA synthetase [Theileria orientalis strain Shintoku]
          Length = 973

 Score =  690 bits (1780), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/806 (46%), Positives = 499/806 (61%), Gaps = 40/806 (4%)

Query: 63  VRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRA 122
           VR  F  +F  KNH  W S+ V+P NDPTLLF NAGMNQ+K I +G +D NT+  KL  A
Sbjct: 24  VRKQFVDYFVSKNHTYWPSASVLPNNDPTLLFVNAGMNQFKDIIMGKSDENTEFGKLRTA 83

Query: 123 CNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLP 182
           CN+QKCIRAGGKHNDL+DVG D YH+T+FEMLGNWSFGDYFK +AI +AWELLT+VY+L 
Sbjct: 84  CNSQKCIRAGGKHNDLEDVGHDCYHNTYFEMLGNWSFGDYFKEKAISYAWELLTEVYKLD 143

Query: 183 ADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPCSEI 242
            +RLY TYFGG++      D E+RD+W K+LP+S++LPFG K+NFWEM DTGPCGPC+EI
Sbjct: 144 PERLYVTYFGGNDNC--PADLESRDLWTKYLPSSKILPFGQKENFWEMADTGPCGPCTEI 201

Query: 243 HYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSI 302
           HYD  GNRDA+SLVN DDP  +E+WN+VF+Q+NR  DG L+ LP   VDTG+G ERL +I
Sbjct: 202 HYDHVGNRDASSLVNMDDPKVVELWNLVFMQYNRNKDGKLEKLPKPCVDTGMGLERLCAI 261

Query: 303 LQNKMSNYDTDVFMPIFDAIQQAT-GARPYSGKVGADDADKVDMAYRVVADHIRTLSFAI 361
           L+   SNYD+D+   +   I Q       Y+G      +  +D+AYRVV+DHIR LS AI
Sbjct: 262 LRGSNSNYDSDLLHDLILYINQLLPKLEAYTG-----GSTPLDVAYRVVSDHIRCLSIAI 316

Query: 362 ADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREA 421
           AD   P NEGR YVLRRILRRAVRY  + L   + F + LV  V   +GD +  LK+ E 
Sbjct: 317 ADRVYPSNEGRGYVLRRILRRAVRYCRDYLGTTEPFLHKLVPCVSSQLGDAYQNLKEYEE 376

Query: 422 HIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQLMAE 481
            I+ +I  EE  F  TL KG+EKFKK A+    K L+G DAF+L+ +YGFPLDLT LM++
Sbjct: 377 DIKSVILDEEKLFLVTLGKGVEKFKKMAEKCTNKQLTGTDAFLLYQSYGFPLDLTVLMSK 436

Query: 482 ERGLLVDIEGFNNAMDEARERSR--------SAQNKQAGGAIVMDADAT-AALHKRGVLA 532
           E GL VD+EG+N  +   +E+S         S ++K       + AD   AAL   G   
Sbjct: 437 ELGLSVDVEGYNQELKLHQEKSEGRVVRDDGSLESKCDNLLKSLSADKIDAALTSSGNKY 496

Query: 533 TDDSFKFIW------FQDHKSVIKAIYTGSEFIESV--VPGNEVGIVLASSSFYAEQGGQ 584
           TDD+ K+ W       + +++ + +I T     + +   PG+  G+V   + FYAE GGQ
Sbjct: 497 TDDALKYDWDSLNPVDKKYEAKLVSILTEEGVYDRLDYAPGDVFGLVFDRTPFYAEGGGQ 556

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           ++D G ++ L     V  V    G VIH  + +E  G   VG      VDY RR   A N
Sbjct: 557 VYDTGHVDDL----KVLRVYKMSGLVIHFCT-SEENGSAEVGGVKHLSVDYKRRVKAACN 611

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           HT TH+LNF LREVL     Q+GS +  EKL+FD+S+   +  E + +IE  + + ++AE
Sbjct: 612 HTATHILNFVLREVLDQSTYQRGSQLDDEKLKFDYSYNGALPEELIVKIEERMKDFVRAE 671

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
             V +KE    +A  I G+RA F E YP+ VRVV +     D      N E    S E+C
Sbjct: 672 ATVRTKEIEYKQALEIPGIRANFDEKYPEVVRVVNVDMGHTDF-----NGEL--TSTEVC 724

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGS 824
           GGTHLSNT+  E  A++ EEGI+KG+RR+T +T    +K+ E   +  + +DD   +E S
Sbjct: 725 GGTHLSNTKTIEDVAVIGEEGISKGVRRLTMITNEQCHKSKEDFEAFVRTLDD---LEMS 781

Query: 825 LLEKNQVRKAQKKVAEENLQKAVKVA 850
           L   N  ++     A+   +  +K+ 
Sbjct: 782 LKPINYTKEDTAVAAQNANENMIKLT 807


>gi|68074667|ref|XP_679250.1| alanine--tRNA ligase [Plasmodium berghei strain ANKA]
 gi|56499954|emb|CAH95111.1| alanine--tRNA ligase, putative [Plasmodium berghei]
          Length = 1076

 Score =  689 bits (1777), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 402/1024 (39%), Positives = 570/1024 (55%), Gaps = 135/1024 (13%)

Query: 60   ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
            + +VR+ F  +F++K+H    S+ V+P ND TLLF NAGMNQ+K IFLG  D N+ L KL
Sbjct: 50   SEQVRNNFINYFKNKDHTIVDSASVIPYNDNTLLFTNAGMNQFKKIFLGNVDKNSDLGKL 109

Query: 120  TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
             R  +TQKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFGDYFK E+IE+AW+LLT VY
Sbjct: 110  KRCVDTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKEESIEYAWDLLTNVY 169

Query: 180  RLPADRLYATYFGGDEK-AGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGP 238
            ++  +RLY TYFGGD+      PD EA+ IW K+L   R+LPFG KDNFWEM +TGPCGP
Sbjct: 170  KINPNRLYVTYFGGDKNLPSCPPDLEAKKIWSKYLDEKRILPFGMKDNFWEMAETGPCGP 229

Query: 239  CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
            CSEIHYDR GNRDA+ LVN DDP+ +EIWNIVF+Q+N++ + ++  LP+  +DTG+G ER
Sbjct: 230  CSEIHYDRIGNRDASDLVNKDDPSVLEIWNIVFMQYNKDENKNMNKLPSPCIDTGMGLER 289

Query: 299  LTSILQNKMSNYDTDVFMPIFDAIQQATGAR--PYSGKVGADDADKVDMAYRVVADHIRT 356
            +TSILQN  SNYDTD+F PIF  I++        Y GK+   D DK+D AYRV++DHIR 
Sbjct: 290  ITSILQNVQSNYDTDLFTPIFKQIKEIFNDNIPSYQGKINEQDPDKIDYAYRVISDHIRC 349

Query: 357  LSFAIADGSCPGNEGREYVLRRILRRAVRYGSEV--LKAQDGFFNGLVNIVVKVMGDVFP 414
             + AI+DG  P NEGR YV+RRI+RRA+R G +V  +K+   +F  LV+ V K++G+ F 
Sbjct: 350  ATIAISDGCIPSNEGRNYVIRRIIRRAIRVGKQVFNIKSNVLWFYKLVDSVCKILGNCFK 409

Query: 415  ELKQREA--HIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ------GKVLSGQDAFILW 466
            +L+  E   +I+ +I  EE  F KTL KG+++F K  +           + SG+DAF L+
Sbjct: 410  DLQNEEKVNYIKNVIMQEELIFNKTLEKGVDQFNKIIKRCHQNPSNNNNLFSGKDAFDLY 469

Query: 467  DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
             +YGFP+DL ++M EE+ + +++E F N + +  +      N +    I +  +    + 
Sbjct: 470  TSYGFPIDLIEIMCEEKSVKLNMEEF-NTLFKKHQLVSDTNNFKINKVIDLPVEKAHDIK 528

Query: 527  -KRGVLATDDSFKFIWFQDH---------------KSVIKAIYTGSEFIESVVPGNE--- 567
             K  VL T D  K+ W                   KS ++ IY G+ F++ ++  ++   
Sbjct: 529  CKYNVLPTIDYHKYNWNNTFEVPKSKEENKNNLRLKSSVQIIYDGN-FLDEIMHTDDEAK 587

Query: 568  --------------VGIVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHI 613
                            ++L  ++FY E GGQI+D GFI+     F V NVQ    +++HI
Sbjct: 588  EPLSCVKVENKQKKYALILKETNFYYENGGQIYDTGFIQNESMKFQVLNVQKMSDYILHI 647

Query: 614  GSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVD--------- 664
            G L  G  + +   E +  VD++RRKLIA NHT TH+LNF+LR+VL D ++         
Sbjct: 648  GVLLSGCIKKNDIIEAV--VDFERRKLIACNHTATHLLNFSLRKVLADQMNQKKNKCDNK 705

Query: 665  -------------------------------------QKGSVVLPEKLRFDFSHGKPVDP 687
                                                 QKGS+V  EKLRFDFS  + ++ 
Sbjct: 706  DENKKVSLEDSNTIKNKLEENSSCNNNSNGSSIFNCEQKGSLVDDEKLRFDFSFIQNINT 765

Query: 688  EHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDL 747
            + L +IE+ +N  +K ELDV  K   L E+K I G+RA+F E Y D V VV I +  +++
Sbjct: 766  DVLNKIETEINNIVKEELDVSVKTMDLTESKKIKGIRAIFEEDYSDKVNVVFISKNADNV 825

Query: 748  LADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLA---YKA 804
            L + +       S ELCGGTH+ NT+  + F + SEE I KGI RI AVT   A    K 
Sbjct: 826  LNNLDVNYTYLCSIELCGGTHIGNTKYIKEFIITSEESIGKGIHRINAVTNKKAEEINKK 885

Query: 805  FEAACSLEKEV-DDASKIEGS----------------LLEKNQVRKAQKKVAEENLQKAV 847
            F+   S  K V DD ++ + +                L++KN++ +  + + ++ ++K  
Sbjct: 886  FDDLVSKYKHVFDDPNENKLTDVQNYKRILKEDKFLPLIKKNKILEDLEIIEKDIVEKKK 945

Query: 848  KVATETAEAAASNGKPFCI-SRVEVGLDAAAVRE--AVLKVIEQ---------KGMPVMV 895
                E    A   GK +   ++  V LD     E     KV+E+         K +    
Sbjct: 946  NAQKELFNKAMRMGKLYATENKDNVLLDIKLFTEINGNQKVLEKVGQAYNKANKNLSYFF 1005

Query: 896  FSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGK----GGLASGQGT 951
               DE       C      S + K+++   ++   +  ++G  G GK    G     +GT
Sbjct: 1006 IIHDENN---TYCVLEIRDSLKCKEIQAETFMKQVMGSVEGHSGGGKNKAFGSAEKDKGT 1062

Query: 952  DAAQ 955
               Q
Sbjct: 1063 AIKQ 1066


>gi|156089757|ref|XP_001612285.1| alanyl-tRNA synthetase family protein [Babesia bovis]
 gi|154799539|gb|EDO08717.1| alanyl-tRNA synthetase family protein [Babesia bovis]
          Length = 978

 Score =  686 bits (1771), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/760 (49%), Positives = 477/760 (62%), Gaps = 41/760 (5%)

Query: 63  VRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRA 122
           VR  F + FE   HV WKSSPV+P NDPTLLFANAGMNQ+K I  G AD +T+  +L R 
Sbjct: 25  VRSEFIRHFEKHGHVFWKSSPVLPHNDPTLLFANAGMNQFKDIITGKADQSTEYGRLRRV 84

Query: 123 CNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLP 182
           CN+QKCIRAGGKHNDLDDVG+D+YHHTFFEMLGNWSFGDYFK EAI+ AWEL+T+VY+L 
Sbjct: 85  CNSQKCIRAGGKHNDLDDVGRDSYHHTFFEMLGNWSFGDYFKKEAIDMAWELMTEVYKLD 144

Query: 183 ADRLYATYFGGDEK-AGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPCSE 241
             RLY TYFGGD K     PD EARD+WL+ LPASR+LPFG KDNFWEM DTGPCGPCSE
Sbjct: 145 KSRLYVTYFGGDPKLPNCGPDEEARDLWLRHLPASRILPFGMKDNFWEMADTGPCGPCSE 204

Query: 242 IHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTS 301
           IHYD  G RDAASLVN DDP  +E+WN+VF+Q+NR+SDGS++ LP   VDTG+G ER+ +
Sbjct: 205 IHYDHIGGRDAASLVNADDPMVVELWNLVFMQYNRKSDGSVELLPRPCVDTGMGLERVCA 264

Query: 302 ILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAI 361
           +L++  SNYD D+F  IF  + +     P  G  G+D    +D+AYRVVADH R L+ AI
Sbjct: 265 VLKSSNSNYDGDLFTDIFAYVNKLMPHLPPYG--GSDSM--IDVAYRVVADHARCLTVAI 320

Query: 362 ADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREA 421
           ADG  P N+GR YVLRRILRRAVRYG E L +   F + LV+ VV  +G  FPE++    
Sbjct: 321 ADGVEPSNDGRGYVLRRILRRAVRYGKEHLGSSGPFMSKLVDCVVASLGVAFPEIQNNND 380

Query: 422 HIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK-------VLSGQDAFILWDTYGFPLD 474
            I   I  EE  F +TL KG ++F+K    +Q         V+SG DAF+L+ ++GFP D
Sbjct: 381 KIAATIHNEEVLFLETLDKGCDRFRKMVAKLQAGTENSKDLVVSGADAFLLYSSFGFPPD 440

Query: 475 LTQLMAEERGLLVDIEGFNNAMDEARERS-----RSAQNKQAGGAIV---MDADATAALH 526
           LTQLMA E GL VDI+GFN      ++ S     +S    + G A +   + AD  A + 
Sbjct: 441 LTQLMAREMGLDVDIDGFNEHFKRHQQLSEKKLCKSDDPVEQGMADLLSTLSADVLATIS 500

Query: 527 KR-GVLATDDSFKFIWFQDHKSV-------IKAIYTGSEFIESVVPGNEVGIVLASSSFY 578
              G   TDDS K+  F +   V       + A ++ S   + +  G+   +VL  + FY
Sbjct: 501 NSIGGRVTDDSLKYHGFAEAYDVDLEYDVEVLAQWSLSGLNKPLTEGDVFVLVLDRTPFY 560

Query: 579 AEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRR 638
           AE GGQI+D G +    G F V  V    G V H     EG      G  V  KVDY RR
Sbjct: 561 AESGGQIWDVGTL----GPFNVMKVLKMAGMVFHFCVYHEGNAM--PGARVKAKVDYKRR 614

Query: 639 KLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVN 698
             +A NHT TH+LNF LREV  +   QKGS +  EKL+FD +  K +  E L+RIE  + 
Sbjct: 615 VKVACNHTGTHLLNFVLREVYDEQSYQKGSQLDEEKLKFDIAANKQMPDETLQRIEDRMQ 674

Query: 699 EQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLS 758
           E I A   +  +E    +A  I G+RA F +VYP+ VRVVA+ +       D +  +  +
Sbjct: 675 EIIDANWKIEVREIDFKDAVEIPGIRANFTDVYPEVVRVVAMTK-------DGQPIDGKA 727

Query: 759 ISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTT 798
            S E+CGGTH+  T   ++  ++ EE ++KG+RR+T  T 
Sbjct: 728 YSVEICGGTHVPFTGVLKSAIIVGEESVSKGVRRLTLATN 767


>gi|323455368|gb|EGB11236.1| hypothetical protein AURANDRAFT_52432 [Aureococcus anophagefferens]
          Length = 1017

 Score =  683 bits (1763), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/780 (49%), Positives = 479/780 (61%), Gaps = 42/780 (5%)

Query: 57  EWPATKVRDTFFKFF-EDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQ 115
           EW   +VRDTF  +F E + H    SS VVP+ DPTLLFANAGMNQ+KPIFLG A P TQ
Sbjct: 37  EWTVPRVRDTFVDYFAEKRGHTRVPSSGVVPLQDPTLLFANAGMNQFKPIFLGQAAPGTQ 96

Query: 116 LSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELL 175
           L+ L RACN+QKCIRAGGKHNDL+DVG DTYHHTFFEMLG+WSFGDYFK EA  WA ELL
Sbjct: 97  LATLERACNSQKCIRAGGKHNDLEDVGLDTYHHTFFEMLGSWSFGDYFKAEATAWAKELL 156

Query: 176 TKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCKDNFWEMGDT 233
             VY L  DR+YATYF G  + GL PD EARD+WL   F P  +V+P    DNFWEMGD+
Sbjct: 157 VDVYGLDMDRMYATYFEGSPEEGLEPDYEARDLWLAAGFKP-EQVIPGSKADNFWEMGDS 215

Query: 234 GPCGPCSEIHYDRTGNR-DAASLVNNDDPTCIEIWNIVFIQFNRESDGS-LKPLPAKHVD 291
           GPCGPC+E+HYD  G R D A LVN DDPT IEIWN+VFIQF R+     L  LPA+HVD
Sbjct: 216 GPCGPCTELHYDALGGRGDVAHLVNMDDPTVIEIWNLVFIQFERDGKTKRLSSLPAQHVD 275

Query: 292 TGLGFERLTSILQNKMSNYDTDVFMPIFDAI--QQATGARPYSGKVGADD--ADKVDMAY 347
           TGLG ERL +IL    SNYDTD F  +F A   +   G+ PY G +G DD   +  D AY
Sbjct: 276 TGLGLERLVAILNQVPSNYDTDAFSGLFAATLAELPEGSAPYGGLLGDDDKAQNYRDTAY 335

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLV-NIVV 406
           R +ADH+R LSFAIADG+ P NEGR YVLRRILRRAVRYG   L A+ GF   L   +  
Sbjct: 336 RAIADHVRCLSFAIADGARPSNEGRGYVLRRILRRAVRYGLSTLGAEPGFMARLAPALAA 395

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK-VLSGQDAFIL 465
              GD +PEL+     I E++A EEA+F KTL +G++   +    ++   VL G  AF L
Sbjct: 396 SHFGDYYPELRDELPTIVEVLAEEEATFAKTLERGVKYLDEELDKLEATDVLGGDAAFFL 455

Query: 466 WDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAI-----VMDAD 520
           +D+ GFP+DLT  MAEERG LVD  GF  AM    +RS++ +  +A  A+      +   
Sbjct: 456 YDSLGFPVDLTAQMAEERGFLVDEPGFEAAMRAQVDRSKADRKARAEAALGTVRLELGVA 515

Query: 521 ATAALHKRGVLATDDSFKFIWFQDHKS-----------VIKAIYTGSEFIESVV--PGNE 567
           ATAAL   GV  TD         D  +            I A       +++    PG  
Sbjct: 516 ATAALGDAGVAPTDALAVGATVADDATEVNGATVVALVAIDAATGDPALVDAATCGPGAA 575

Query: 568 VGIVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAG-RFSVG 626
           VG+VL ++ FYAE GGQ  D G +     S  V +VQ Y G+V+H  ++  GA    +VG
Sbjct: 576 VGVVLDATPFYAEAGGQASDRGSLVLGGASVDVIDVQAYAGYVVH--TVASGADVALAVG 633

Query: 627 EEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVD 686
           +     VD D R+  A NH  TH +N AL   LGD V Q+GS    E+LRFDFSHGK + 
Sbjct: 634 DAADGVVDGDARRKHAVNHMMTHAVNHALWAELGDGVGQRGSDANDERLRFDFSHGKALK 693

Query: 687 PEHLRRIESIVNEQIKAE-LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRK-- 743
              L  +E+ VN +  A+   V   +  L +AK I  LRAVFGE YPDPV VVA+  K  
Sbjct: 694 AAQLAAVEAAVNTEYVADGATVERAKVGLEDAKNIRALRAVFGEAYPDPVNVVAMFPKAA 753

Query: 744 ------VEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVT 797
                 + D+LA P++++W   S ELCGG HL +   AE F +  E  +AKG+RRI A+T
Sbjct: 754 FAGAPTIADVLASPDDEKWDKASIELCGGNHLGDAAAAEYFVITQETAVAKGVRRIEALT 813


>gi|348576208|ref|XP_003473879.1| PREDICTED: LOW QUALITY PROTEIN: alanyl-tRNA synthetase,
           mitochondrial-like [Cavia porcellus]
          Length = 985

 Score =  681 bits (1756), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/820 (46%), Positives = 499/820 (60%), Gaps = 51/820 (6%)

Query: 53  PQVVEWPATK---VRDTFFKFFEDKN-HVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLG 108
           P   + P T+   VRD F  FF D++ H    S+ V P  DP+LLF NAGMNQ+KPIFLG
Sbjct: 29  PLSTQPPPTQGSAVRDAFLSFFRDRHGHRLVPSASVRPRGDPSLLFVNAGMNQFKPIFLG 88

Query: 109 TADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFG-DYFKNEA 167
           T DP ++++   R  N+QKC+RAGG+HNDL+DVG+D  HHTFFEMLGNW+FG +YFK EA
Sbjct: 89  TVDPRSEMAGFRRVANSQKCVRAGGRHNDLEDVGRDLSHHTFFEMLGNWAFGGEYFKEEA 148

Query: 168 IEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDN 226
              AWELLT++Y +P DRL+ +YFGGD KAGL PD E RDIWL   +P +RVL FG ++N
Sbjct: 149 CSMAWELLTQIYGIPKDRLWVSYFGGDPKAGLDPDLETRDIWLSLGVPVNRVLSFGPQEN 208

Query: 227 FWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
           FWEMGDTGPCGPC+EIHYD  G   A        P  +E+WN+VF+Q+NRE++GSL+ LP
Sbjct: 209 FWEMGDTGPCGPCTEIHYDLAGGVGA--------PQLVELWNLVFMQYNREANGSLQSLP 260

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
            +HVDTG+G ERL ++LQ K S YDTD+F P+  AI Q  GA PY G+VGA D    D A
Sbjct: 261 QRHVDTGMGLERLVAMLQGKHSTYDTDLFSPLLHAIHQGCGAPPYLGRVGAADEGHTDTA 320

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
           YRVVADHIRTLS  IADG  PG  G   VLRRILRRAVR+ +EVL+A  GF   LV +VV
Sbjct: 321 YRVVADHIRTLSICIADGVFPGMSGAPLVLRRILRRAVRFSTEVLQAPPGFLGSLVPVVV 380

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAF--- 463
           + +GD +PEL++  A I  +++ EEA+F  +L +G    ++       K L   D F   
Sbjct: 381 ETLGDTYPELRRNSAQIASLVSEEEAAFLDSLQRGRRIIERTL-----KRLGPSDLFPAD 435

Query: 464 ILWD-----TYGFPLDLTQLMAEERGLLVDIEGFNNAM-DEARERSRSAQNKQAGGAIVM 517
           + W        G PLDL +LM  E+G+ +D E     + +EA+ R R A+  Q    + +
Sbjct: 436 VAWSLSMSGNLGLPLDLVELMLAEKGVHLDSERLAQLVEEEAQLRGRQAEPAQE-QRLRL 494

Query: 518 DADATAALHKRGVLATDDSFKFIW---------FQDHKSVIKAIYT-GSEFIESVVPGNE 567
           D  A A L  RGV  TDDS K+ +         F   ++ +  +YT     + SV PG  
Sbjct: 495 DVHALAELQHRGVSPTDDSPKYSYSLQSTGNYEFGPCEAQVLQLYTEDGAAVASVGPGQR 554

Query: 568 VGIVLASSSFYAEQGGQIFDEGF---IEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFS 624
            G++L  ++FYAEQGGQ  D G+   IE     F V   Q++GGFV+H    +E      
Sbjct: 555 CGLLLNRTNFYAEQGGQASDRGYLVRIEQQDVLFPVTQAQVWGGFVLHEVLASE---HLQ 611

Query: 625 VGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKP 684
           VG+ V   VD D R      HT TH+LN+ALRE LG +V+Q+GS + PE+LRFD +   P
Sbjct: 612 VGDLVQLHVDEDWRLSCMEKHTATHLLNWALRETLGPNVEQRGSHLNPERLRFDVATQSP 671

Query: 685 VDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKV 744
           + PE LR IE  V E ++ +  V+ +E  L    CI GLR+   EVYPDPVRVV++G  V
Sbjct: 672 LTPEQLRTIEDTVQEAVQQDKPVYMEEVPLELTACIPGLRS-LDEVYPDPVRVVSVGVPV 730

Query: 745 EDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKA 804
              L DP ++  L  S ELC GTHL  T       +  E  + KG  R+ AVT   A +A
Sbjct: 731 ACAL-DPMSQAALQASVELCCGTHLLRTGAVGDLVITGERQLTKGTTRLLAVTGEQAQQA 789

Query: 805 FEAACSLEKEVDDA----SKIEGSLLEKNQVRKAQKKVAE 840
            E   SL +EVD A    S+   +L E  Q+ K   ++ E
Sbjct: 790 REVGESLAREVDAAAERLSQGTRNLAEAQQLSKDIGRLTE 829


>gi|300794887|ref|NP_001178140.1| alanyl-tRNA synthetase, mitochondrial [Bos taurus]
          Length = 983

 Score =  680 bits (1754), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/786 (46%), Positives = 489/786 (62%), Gaps = 46/786 (5%)

Query: 60  ATKVRDTFFKFFEDKN-HVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSK 118
           A  VRD F  FF D++ H    S+ V P  DP+LLF NAGMNQ+KPIFLGT DP ++++ 
Sbjct: 37  AAAVRDAFLSFFRDRHGHRLVPSASVRPRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAG 96

Query: 119 LTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFG-DYFKNEAIEWAWELLTK 177
             R  N+QKC+RAGG+H+DL+DVG+D  HHTFFEMLGNW+FG +YFK EA   AWELLT+
Sbjct: 97  FRRVANSQKCVRAGGRHSDLEDVGRDLSHHTFFEMLGNWAFGGEYFKEEACSMAWELLTQ 156

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPC 236
           VY +P DRL+ +YFGGD KAGL PD E+RDIWL   +PASRVL FG ++NFWEMGDTGPC
Sbjct: 157 VYGIPEDRLWVSYFGGDPKAGLGPDLESRDIWLSLGVPASRVLSFGPEENFWEMGDTGPC 216

Query: 237 GPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGF 296
           GPC+EIHYD  G   A        P  +E+WN+VF+Q NRE+DGSL+PLP +HVDTG+G 
Sbjct: 217 GPCTEIHYDLAGGAGA--------PQLVELWNLVFMQHNREADGSLQPLPQRHVDTGMGL 268

Query: 297 ERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRT 356
           ERL ++LQ ++S YDTD+F P+ DAI Q  GA PYSG++GA D  + D AYRVVADHIRT
Sbjct: 269 ERLVAVLQGRLSTYDTDLFSPLLDAIHQGCGAPPYSGRIGAADEGRTDTAYRVVADHIRT 328

Query: 357 LSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPEL 416
           LS  IADG  PG  G   VLRRILRRAVR+ +EVL+A  GF   LV +VV+ +GD +PEL
Sbjct: 329 LSVCIADGVSPGMSGAPLVLRRILRRAVRFSTEVLRAPPGFLGSLVPVVVETLGDAYPEL 388

Query: 417 KQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAF---ILWD-----T 468
           ++  A I  +++ +EA+F  +L +G    ++       K L   D F   + W       
Sbjct: 389 RRSSAQIASLVSEDEAAFLASLQRGRRVIERTL-----KRLGPSDVFPAEVAWSLSLSGN 443

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNN-AMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
            G PLDL +LM EE+G+ +D  G    A +EA+ R+  A+  Q  G + ++  A   L +
Sbjct: 444 LGLPLDLVELMLEEKGVPLDTAGLERLAQEEAQHRALQAEPVQEQG-LRLNVHALGELQR 502

Query: 528 RGVLATDDSFKFIW---------FQDHKSVIKAIYT-GSEFIESVVPGNEVGIVLASSSF 577
           RGV  TDDS K+ +         F   ++ +  +YT     + S+  G   G++L  ++F
Sbjct: 503 RGVPPTDDSPKYSYSLQPGGSYKFGTCEAQVLQLYTEDGTAVASIGDGQHCGLLLDKTNF 562

Query: 578 YAEQGGQIFDEGFIEGLFGS----FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKV 633
           YAEQGGQ  D G++  L G     F V   Q+ GGF++H     E   R  VG++V   V
Sbjct: 563 YAEQGGQASDRGYLV-LVGQQDVLFPVARAQVCGGFILHEVVAPE---RLRVGDQVQLHV 618

Query: 634 DYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRI 693
           D   R      HT  H+LN+ALR+VLG   +Q+GS + PE+LRFD +   P+ PE LR +
Sbjct: 619 DEAWRLSCMEKHTAIHLLNWALRQVLGPGTEQRGSHLNPERLRFDVATQAPLTPEQLRAV 678

Query: 694 ESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPEN 753
           E  V + +  +  V+ +E  LA    + GLR+   EVYPDPVRVV++G  V   L DP +
Sbjct: 679 EVTVQKAVGRDEAVYMEEVALARTAHVPGLRS-LDEVYPDPVRVVSVGVPVAHAL-DPAS 736

Query: 754 KEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEK 813
           +  L  S ELC GTHL  T       ++ E  + KGI R+ AV    A +A E    L +
Sbjct: 737 QAALHTSVELCCGTHLLRTGAIGDLVIIGERQLVKGITRLLAVNGEQAQQAREVGQRLAQ 796

Query: 814 EVDDAS 819
           EV+ A+
Sbjct: 797 EVEAAA 802


>gi|296474486|tpg|DAA16601.1| TPA: alanyl-tRNA synthetase 2, mitochondrial-like [Bos taurus]
          Length = 983

 Score =  678 bits (1750), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/786 (46%), Positives = 489/786 (62%), Gaps = 46/786 (5%)

Query: 60  ATKVRDTFFKFFEDKN-HVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSK 118
           A  VRD F  FF D++ H    S+ V P  DP+LLF NAGMNQ+KPIFLGT DP ++++ 
Sbjct: 37  AAAVRDAFLSFFRDRHGHRLVPSASVRPRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAG 96

Query: 119 LTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFG-DYFKNEAIEWAWELLTK 177
             R  N+QKC+RAGG+H+DL+DVG+D  HHTFFEMLGNW+FG +YFK EA   AWELLT+
Sbjct: 97  FRRVANSQKCVRAGGRHSDLEDVGRDLSHHTFFEMLGNWAFGGEYFKEEACSMAWELLTQ 156

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPC 236
           VY +P DRL+ +YFGGD KAGL PD E+RDIWL   +PASRVL FG ++NFWEMGDTGPC
Sbjct: 157 VYGIPEDRLWVSYFGGDPKAGLGPDLESRDIWLSLGVPASRVLSFGPEENFWEMGDTGPC 216

Query: 237 GPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGF 296
           GPC+EIHYD  G   A        P  +E+WN+VF+Q NRE+DGSL+PLP +HVDTG+G 
Sbjct: 217 GPCTEIHYDLAGGAGA--------PQLVELWNLVFMQHNREADGSLQPLPQRHVDTGMGL 268

Query: 297 ERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRT 356
           ERL ++LQ ++S YDTD+F P+ DAI Q  GA PYSG++GA D  + D AYRVVADHIRT
Sbjct: 269 ERLVAVLQGRLSTYDTDLFSPLLDAIHQGCGAPPYSGRIGAADEGRTDTAYRVVADHIRT 328

Query: 357 LSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPEL 416
           LS  IADG  PG  G   VLRRILRRAVR+ +EVL+A  GF   LV +VV+ +GD +PEL
Sbjct: 329 LSVCIADGVSPGMSGAPLVLRRILRRAVRFSTEVLRAPPGFLGSLVPVVVETLGDAYPEL 388

Query: 417 KQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAF---ILWD-----T 468
           ++  A I  +++ +EA+F  +L +G    ++       K L   D F   + W       
Sbjct: 389 RRSSAQIASLVSEDEAAFLASLQRGRRVIERTL-----KRLGPSDVFPAEVAWSLSLSGN 443

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNN-AMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
            G PLDL +LM EE+G+ +D  G    A +EA+ R+  A+  Q  G + ++  A   L +
Sbjct: 444 LGLPLDLVELMLEEKGVPLDTAGLERLAQEEAQHRALQAEPVQEQG-LRLNVHALGELQR 502

Query: 528 RGVLATDDSFKFIW---------FQDHKSVIKAIYT-GSEFIESVVPGNEVGIVLASSSF 577
           RGV  TDDS K+ +         F   ++ +  +YT     + S+  G   G++L  ++F
Sbjct: 503 RGVPPTDDSPKYSYSLQPGGSYKFGTCEAQVLQLYTEDGTAVASIGDGQHCGLLLDKTNF 562

Query: 578 YAEQGGQIFDEGFIEGLFGS----FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKV 633
           YAEQGGQ  D G++  L G     F V   Q+ GGF++H     E   R  VG++V   V
Sbjct: 563 YAEQGGQASDRGYLV-LVGQQDVLFPVARAQVCGGFILHEVVAPE---RLRVGDQVQLHV 618

Query: 634 DYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRI 693
           D   R      HT  H+LN+ALR+VLG   +Q+GS + PE+LRFD +   P+ PE LR +
Sbjct: 619 DEAWRLSCMEKHTAIHLLNWALRQVLGPGTEQRGSHLNPERLRFDVATQAPLTPEQLRAV 678

Query: 694 ESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPEN 753
           E  V + +  +  V+ +E  LA    + GLR+   EVYPDPVRVV++G  V   L DP +
Sbjct: 679 EVTVQKAVGRDEAVYMEEVALARTAHVPGLRS-LDEVYPDPVRVVSVGVPVAHAL-DPAS 736

Query: 754 KEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEK 813
           +  L  S ELC GTHL  T       ++ E  + KGI R+ AV    A +A E    L +
Sbjct: 737 QAALHTSVELCCGTHLLRTGAIGDLVIIGERQLVKGITRLLAVNGEQAQQAREVGQRLAQ 796

Query: 814 EVDDAS 819
           EV+ A+
Sbjct: 797 EVEAAA 802


>gi|410959304|ref|XP_003986251.1| PREDICTED: alanine--tRNA ligase, mitochondrial [Felis catus]
          Length = 985

 Score =  676 bits (1743), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/786 (46%), Positives = 488/786 (62%), Gaps = 44/786 (5%)

Query: 60  ATKVRDTFFKFFEDKN-HVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSK 118
           AT VRD F  FF D++ H    S+ V P  DP+LLF NAGMNQ+KPIFLGT DP ++++ 
Sbjct: 39  ATAVRDAFLSFFRDRHGHRLVPSASVRPRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAG 98

Query: 119 LTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFG-DYFKNEAIEWAWELLTK 177
             R  N+QKC+RAGG+HNDL+DVG+D  HHTFFEMLGNW+FG +YFK EA   AWELLT+
Sbjct: 99  FRRVANSQKCVRAGGRHNDLEDVGRDLSHHTFFEMLGNWAFGGEYFKEEACRMAWELLTQ 158

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPC 236
           VY +P DRL+ +YFGGD KAGL PD E+RDIWL   + AS VL FG ++NFWEMG+TGPC
Sbjct: 159 VYGIPEDRLWVSYFGGDPKAGLDPDLESRDIWLSLGVCASHVLSFGPQENFWEMGNTGPC 218

Query: 237 GPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGF 296
           GPC+EIHYD  G   A        P  +E+WN+VFIQ NRE+DGSL+PLP +HVDTG+G 
Sbjct: 219 GPCTEIHYDLAGRGGA--------PQLVELWNLVFIQHNREADGSLQPLPQRHVDTGMGL 270

Query: 297 ERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRT 356
           ERL ++LQ   S YDTD+F P+ DAIQQ  G  PY G+VGA D  + DMAYRVVADHIRT
Sbjct: 271 ERLVAVLQGARSTYDTDLFSPLLDAIQQGCGVPPYLGRVGAADEGRTDMAYRVVADHIRT 330

Query: 357 LSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPEL 416
           LS  IADG CPG  G   VLRRILRRAVR+ +EVL+A  GF   LV +VV+ +GD +PEL
Sbjct: 331 LSVCIADGVCPGMSGAPLVLRRILRRAVRFSTEVLRAPPGFLGSLVPVVVETLGDAYPEL 390

Query: 417 KQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAF---ILWD-----T 468
           ++  A I  +++ +EA+F  +L +G     +   D   + L   D F   + W       
Sbjct: 391 RKHSAQIVNLVSEDEAAFLASLQRG-----RHIIDQTLRRLGPSDLFPAEVAWSLSLSGN 445

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNN-AMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
            G PLDL +LM EE+G+ +D  G    A +E + RSR A+  Q  G + ++  A   L +
Sbjct: 446 LGLPLDLVELMLEEKGVRLDSAGLARLAQEEGQHRSRQAEPAQERG-LQLNVHALGDLQR 504

Query: 528 RGVLATDDSFKFIW---------FQDHKSVIKAIYT-GSEFIESVVPGNEVGIVLASSSF 577
           RGV  TDDS K+ +         F   ++ +  +YT     + SV  G   G++L  ++F
Sbjct: 505 RGVPPTDDSPKYNYSLRPSGGYEFGTCEAQVLQLYTEDGTAVASVGKGQRCGLLLDKTNF 564

Query: 578 YAEQGGQIFDEGFIEGLFGS---FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVD 634
           YAEQGGQ  D G++  +      F V   Q+ GGF++H     EG     VG++V   VD
Sbjct: 565 YAEQGGQASDRGYLVRVGQEDVLFPVPRAQVCGGFILHEAVAPEG---LEVGDQVQLHVD 621

Query: 635 YDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIE 694
              R      HT TH+LN+ALR+ LG   +Q+GS + PE+LRFD +   P+ PE LR +E
Sbjct: 622 EAWRLGCMEKHTATHLLNWALRQTLGPGTEQRGSHLNPERLRFDVATQAPLTPEQLRAVE 681

Query: 695 SIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENK 754
             V E +  +  V+ +E  LA    + GLR+   EVYPDPVRVV++G  V + L D  ++
Sbjct: 682 GTVQEAVGQDEAVYMEEVALARTAHVPGLRS-LDEVYPDPVRVVSVGVPVAEAL-DLASQ 739

Query: 755 EWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKE 814
             L  S ELC GTHL  T       ++ E  +++G  R+ AVT   A +A E   +L +E
Sbjct: 740 AALQTSVELCCGTHLLRTGAIGDLVIVGERQLSRGTTRLLAVTGEQAQQAREVGQALAQE 799

Query: 815 VDDASK 820
           V  A++
Sbjct: 800 VGAAAE 805


>gi|440902431|gb|ELR53223.1| Alanyl-tRNA synthetase, mitochondrial, partial [Bos grunniens
           mutus]
          Length = 992

 Score =  675 bits (1742), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/783 (46%), Positives = 486/783 (62%), Gaps = 46/783 (5%)

Query: 60  ATKVRDTFFKFFEDKN-HVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSK 118
           A  VRD F  FF D++ H    S+ V P  DP+LLF NAGMNQ+KPIFLGT DP ++++ 
Sbjct: 46  AAAVRDAFLSFFRDRHGHRLVPSASVRPRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAG 105

Query: 119 LTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFG-DYFKNEAIEWAWELLTK 177
             R  N+QKC+RAGG+H+DL+DVG+D  HHTFFEMLGNW+FG +YFK EA   AWELLT+
Sbjct: 106 FRRVANSQKCVRAGGRHSDLEDVGRDLSHHTFFEMLGNWAFGGEYFKEEACSMAWELLTQ 165

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPC 236
           VY +P DRL+ +YFGGD KAGL PD E+RDIWL   +PASRVL FG ++NFWEMGDTGPC
Sbjct: 166 VYGIPEDRLWVSYFGGDPKAGLGPDLESRDIWLSLGVPASRVLSFGPEENFWEMGDTGPC 225

Query: 237 GPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGF 296
           GPC+EIHYD  G   A        P  +E+WN+VF+Q NRE+DGSL+PLP +HVDTG+G 
Sbjct: 226 GPCTEIHYDLAGGAGA--------PQLVELWNLVFMQHNREADGSLQPLPQRHVDTGMGL 277

Query: 297 ERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRT 356
           ERL ++LQ ++S YDTD+F P+ DAI Q  GA PYSG++GA D  + D AYRVVADHIRT
Sbjct: 278 ERLVAVLQGRLSTYDTDLFSPLLDAIHQGCGAPPYSGRIGAADEGRTDTAYRVVADHIRT 337

Query: 357 LSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPEL 416
           LS  IADG  PG  G   VLRRILRRAVR+ +EVL+A  GF   LV +VV+ +GD +PEL
Sbjct: 338 LSVCIADGVSPGMSGAPLVLRRILRRAVRFSTEVLRAPPGFLGSLVPVVVETLGDAYPEL 397

Query: 417 KQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAF---ILWD-----T 468
           ++  A I  +++ +EA+F  +L +G    ++       K L   D F   + W       
Sbjct: 398 RRSSAQIASLVSEDEAAFLASLQRGRRVIERTL-----KRLGPSDVFPAEVAWSLSLSGN 452

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNN-AMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
            G PLDL +LM EE+G+ +D  G    A +EA+ R+  A+  Q  G + ++      L +
Sbjct: 453 LGLPLDLVELMLEEKGVPLDTAGLERLAQEEAQHRALQAEPVQEQG-LRLNVHTLGELQR 511

Query: 528 RGVLATDDSFKFIW---------FQDHKSVIKAIYT-GSEFIESVVPGNEVGIVLASSSF 577
           RGV  T+DS K+ +         F   ++ +  +YT     + S+  G   G++L  ++F
Sbjct: 512 RGVPPTNDSPKYSYSLQPGGSYKFGTCEAQVLQLYTEDGTAVASIGDGQRCGLLLDKTNF 571

Query: 578 YAEQGGQIFDEGFIEGLFGS----FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKV 633
           YAEQGGQ  D G++  L G     F V   Q+ GGF++H     E   R  VG++V   V
Sbjct: 572 YAEQGGQASDRGYLV-LVGQQDVLFPVARAQVCGGFILHEVVAPE---RLRVGDQVQLHV 627

Query: 634 DYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRI 693
           D   R      HT  H+LN+ALR+VLG   +Q+GS + PE+LRFD +   P+ PE LR +
Sbjct: 628 DEAWRLSCMEKHTAIHLLNWALRQVLGPGTEQRGSHLNPERLRFDVATQAPLTPEQLRAV 687

Query: 694 ESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPEN 753
           E  V + +  +  V+ +E  LA    + GLR+   EVYPDPVRVV++G  V   L DP +
Sbjct: 688 EVTVQKAVGRDEAVYMEEVALARTAHVPGLRS-LDEVYPDPVRVVSVGVPVAHAL-DPAS 745

Query: 754 KEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEK 813
           +  L  S ELC GTHL  T       ++ E  + KGI R+ AV    A +A E    L +
Sbjct: 746 QAALHTSVELCCGTHLLRTGAIGDLVIIGERQLVKGITRLLAVNGEQAQQAREVGQRLAQ 805

Query: 814 EVD 816
           EV+
Sbjct: 806 EVE 808


>gi|410917664|ref|XP_003972306.1| PREDICTED: alanine--tRNA ligase, mitochondrial-like [Takifugu
           rubripes]
          Length = 975

 Score =  675 bits (1741), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 411/986 (41%), Positives = 549/986 (55%), Gaps = 72/986 (7%)

Query: 37  ISRFSASAVAAMPGADPQVVEWPATKVRDTFFKFFEDK-NHVNWKSSPVVPVNDPTLLFA 95
           I  FS  +  +  G  P   E  AT VR TF +FF  K  H+   SSPV P  DP+LLF 
Sbjct: 8   IGGFSVRSCRSFSGCAP---EQTATWVRSTFVEFFRQKYEHLLVPSSPVRPRLDPSLLFV 64

Query: 96  NAGMNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLG 155
           NAGMNQ+KPI LGT DP ++++   R  N+QKC+RAGGKHNDL+DVG+D YHHTFFEMLG
Sbjct: 65  NAGMNQFKPILLGTVDPRSKMASYRRVVNSQKCVRAGGKHNDLEDVGRDVYHHTFFEMLG 124

Query: 156 NWSFGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LP 214
           NWSFGDYFK EA   AW LLT+ Y +PA RLY +YF GD  +GL  D E R +WL   +P
Sbjct: 125 NWSFGDYFKEEACSMAWSLLTEHYGIPASRLYVSYFAGDAASGLPADEETRHVWLDIGVP 184

Query: 215 ASRVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQF 274
            SR+L FG KDNFWEMGD+GPCGPC+EIHYD  G RDAA+LVN +DP  +EIWN+VF+Q+
Sbjct: 185 PSRLLAFGLKDNFWEMGDSGPCGPCTEIHYDHVGGRDAAALVNANDPDLVEIWNLVFMQY 244

Query: 275 NRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGK 334
           NRE +GSL  LP   VDTG+G ERL  +LQ K SNYDTD+F P+  AIQQ +   PY G 
Sbjct: 245 NREVNGSLCLLPQFSVDTGMGLERLVRVLQGKRSNYDTDLFTPLLHAIQQRSKVGPYRGS 304

Query: 335 VGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQ 394
           +G  DA +VDMAYRVVADHIRTL+  IADG  PG  G E VLRRILRRAVR+ +EVL+  
Sbjct: 305 MGTADAGRVDMAYRVVADHIRTLTVCIADGVYPGMSGAELVLRRILRRAVRFCNEVLQTP 364

Query: 395 DGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKK--AAQDV 452
            G    LV  V  ++G+V+PEL Q    I  II   E  F  +L +G     +  + +D 
Sbjct: 365 PGTLASLVPTVCHILGNVYPELHQESNTIINIINENELHFLSSLQQGSRVIHRTLSKKDY 424

Query: 453 QGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDE---ARERSRSAQNK 509
           +  V     A+ L    GFPLDL  LM EERG+ VD +  N  + E    R R +S    
Sbjct: 425 KHGVFPAAVAWSLHRDLGFPLDLVDLMLEERGVRVDHQELNILITENNKVRGRLQSCDES 484

Query: 510 QAGGAIVMDADATAALHKRGVLATDDSFK---------FIWFQDHKSVIKAIYTGSEFIE 560
           +    + +D    A L +  V  TDDS K         +++ Q H +V+ A+Y G   + 
Sbjct: 485 K----LTLDVATLAELQRLRVPHTDDSLKYQYHLEGDTYVFPQCHATVL-ALYDGQTLVA 539

Query: 561 SVVPGNEVGIVLASSSFYAEQGGQIFDEGFI---EGLFGSFYVRNVQIYGGFVIHIGSLT 617
            V  G    ++L  + FY EQGGQ  D G+    E     + V  V   GG+V+H  + T
Sbjct: 540 EVPEGRRCSVILDQTCFYTEQGGQSHDHGYFTKNELPDMPYTVETVIQVGGYVVHQVTAT 599

Query: 618 EGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRF 677
           +       G++V   +D   R      HT TH+LNFALR VLG  V Q+GS V  ++LRF
Sbjct: 600 D---HLKTGDQVQLHLDKIHRLACMVKHTGTHILNFALRNVLGPTVQQRGSHVSADRLRF 656

Query: 678 DFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRV 737
           DFS    +    L+R++  V++ I A   ++S+E  L  A+ I GLR V  EVYPDPVRV
Sbjct: 657 DFSVMASLSVCELQRVDKQVSDIISANHSIYSQEIPLRMARNIQGLRTV-DEVYPDPVRV 715

Query: 738 VAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVT 797
           V++   V DLL    +++    S ELC GTHL  T       ++SE+ I +G+ RI AVT
Sbjct: 716 VSVAVPVSDLLVGQPDRQ---TSVELCCGTHLLQTGAIRDLLIISEQQIVRGMSRIIAVT 772

Query: 798 TGLAYKAFEAACSLEKEVDD--------------------ASKIEGSLLEKNQVRKAQKK 837
              A +A EA   L +EVD                        ++ + + + Q R+ Q +
Sbjct: 773 GQEAIRAREAGQLLLQEVDSLAARLTSSASSSLNAAQHLAEQAVDNTAIPQWQRRELQSR 832

Query: 838 VAEENLQKAVKVATETAEA--AASNGKPFCISRVEVGLDAAAVREAVLKVIEQK------ 889
           +    LQ++   A    E   AA++ +          L   +V    L ++ +       
Sbjct: 833 L--RTLQRSANTAVRKLEIREAATSAQSLLEKNGSKDLQVDSVNTDSLSILMKTVNHLST 890

Query: 890 ---GMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLA 946
                 VM+ +  + + K +    VP+    S  L  S+W TA    L G  G G   +A
Sbjct: 891 TAPHSHVMLLAHQKHSGKVLCACQVPKS---STFLSASDWATAVCGHLGGSAG-GSVLVA 946

Query: 947 SGQGTDAAQVTPAMDLAAEFAAMKLR 972
            G G+ ++ ++ A+  A EFA  K++
Sbjct: 947 KGTGS-SSDISEAVKWAEEFALAKIK 971


>gi|73973034|ref|XP_532155.2| PREDICTED: alanyl-tRNA synthetase, mitochondrial [Canis lupus
           familiaris]
          Length = 985

 Score =  674 bits (1739), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/800 (46%), Positives = 491/800 (61%), Gaps = 47/800 (5%)

Query: 49  PGADPQVVEWP---ATKVRDTFFKFFEDKN-HVNWKSSPVVPVNDPTLLFANAGMNQYKP 104
           P   P   E P   AT VRD F  FF D++ H    S+ V P  DP+LLF NAGMNQ+KP
Sbjct: 25  PSRRPLSSEPPPAQATAVRDAFLSFFRDRHGHRLVPSASVRPRGDPSLLFVNAGMNQFKP 84

Query: 105 IFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFG-DYF 163
           IFLGT +P ++++   R  N+QKC+RAGG+HNDL+DVG+D  HHTFFEMLGNW+FG +YF
Sbjct: 85  IFLGTVNPRSEMAGFRRVANSQKCVRAGGRHNDLEDVGRDLSHHTFFEMLGNWAFGGEYF 144

Query: 164 KNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFG 222
           K EA   AWELLT+VY +P DRL+ +YFGGD KAGL PD E+RDIWL   + AS VL FG
Sbjct: 145 KEEACSMAWELLTQVYGIPKDRLWVSYFGGDPKAGLDPDLESRDIWLNLGVHASHVLSFG 204

Query: 223 CKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSL 282
            ++NFWEMGDTGPCGPC+EIHYD  G   A        P  +E+WN+VFIQ NRE+DGSL
Sbjct: 205 PEENFWEMGDTGPCGPCTEIHYDLAGRVGA--------PQLVELWNLVFIQHNRETDGSL 256

Query: 283 KPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADK 342
           +PLP +HVDTG+G ERL ++LQ   S YDTD+F P+  AI Q  GA PY G+VGA D  +
Sbjct: 257 QPLPQRHVDTGMGLERLVAVLQGTPSTYDTDLFSPLLKAIHQGCGAPPYLGQVGAADKGR 316

Query: 343 VDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLV 402
            DMAYRVVADHIRTLS  IADG  PG  G   VLRRILRRAVR+ +EVL+A  GF   LV
Sbjct: 317 TDMAYRVVADHIRTLSVCIADGVYPGMSGAPLVLRRILRRAVRFSTEVLQAPPGFLGSLV 376

Query: 403 NIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDA 462
            +VV+++GD +PEL++  A I  +++ EEA+F  +L +G     +   D   + L   + 
Sbjct: 377 PVVVEILGDTYPELQKHSAQIASLVSEEEAAFLASLQRG-----RRIIDQTLRCLGPSEL 431

Query: 463 F---ILWD-----TYGFPLDLTQLMAEERGLLVDIEGFNN-AMDEARERSRSAQNKQAGG 513
           F   + W        G PLDL +LM EE+G+ +D  G    A +EA+ RSR A+  Q  G
Sbjct: 432 FPAEVAWSLSLSGNLGLPLDLVELMLEEKGVQLDSAGLARLAQEEAKLRSRQAEPVQRQG 491

Query: 514 AIVMDADATAALHKRGVLATDDSFKFIW---------FQDHKSVIKAIYT-GSEFIESVV 563
            + ++  A   L +RGV  TDDS K+ +         F   ++ +  +Y      + SV 
Sbjct: 492 -LQLNVHALGELQRRGVPPTDDSPKYNYSLRPSGGYEFNPCEAQVLQLYLEDGTAVASVG 550

Query: 564 PGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFGS---FYVRNVQIYGGFVIHIGSLTEGA 620
            G   G++L  ++FYAEQGGQ  D G++  +      F V   QI GGF++H     EG 
Sbjct: 551 KGQHCGLLLDKTNFYAEQGGQASDRGYLVRVGQEDVLFPVARAQICGGFILHEAVAPEG- 609

Query: 621 GRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFS 680
               VG++V   VD   R      HT TH+LN+ALR+ LG   +Q+GS + PE+LRFD +
Sbjct: 610 --LKVGDQVQLHVDEAWRLGCMEKHTATHLLNWALRQALGPGTEQRGSHLNPERLRFDVA 667

Query: 681 HGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAI 740
              P+ PE L+ +E  V E +  +  V+ +E  LA    + GLR+   EVYPDPVRVV++
Sbjct: 668 TQAPLTPEQLQAVEGTVQEAVGQDEAVYMEEVALAHTAHVPGLRS-LDEVYPDPVRVVSV 726

Query: 741 GRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGL 800
           G  V   L DP ++  L  S ELC GTHL  T       ++ E  + KG  R+ AVT   
Sbjct: 727 GVPVARAL-DPASQAALQTSVELCCGTHLLRTGAVGDLVIIGERQLTKGTVRLLAVTGEQ 785

Query: 801 AYKAFEAACSLEKEVDDASK 820
           A +A E   SL +EV+ A++
Sbjct: 786 AQQAREVGQSLAQEVEAATE 805


>gi|71033767|ref|XP_766525.1| alanyl-tRNA synthetase [Theileria parva strain Muguga]
 gi|68353482|gb|EAN34242.1| alanyl-tRNA synthetase, putative [Theileria parva]
          Length = 1011

 Score =  673 bits (1736), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/827 (43%), Positives = 497/827 (60%), Gaps = 43/827 (5%)

Query: 46  AAMPGADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPI 105
           + M   D    +W    VR  F  +F  KNHV+W SS V+P NDPTLLF NAGMNQ+K I
Sbjct: 51  SKMSTDDKVTGDW----VRKQFIDYFVSKNHVHWPSSSVLPHNDPTLLFVNAGMNQFKDI 106

Query: 106 FLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKN 165
            +G +D N++  KL   CN+QKCIRAGGKHNDL+DVG+D YH T+FEMLGNWSFG YFK 
Sbjct: 107 IMGKSDENSEFGKLKMVCNSQKCIRAGGKHNDLEDVGQDCYHQTYFEMLGNWSFGAYFKP 166

Query: 166 EAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKD 225
           EAI +AW+LLT VY+L   RLY TYFGGD+     PD+E R+IWLKFLP++R+LPFG KD
Sbjct: 167 EAISYAWDLLTNVYKLDPSRLYVTYFGGDDSC--EPDHETREIWLKFLPSNRILPFGSKD 224

Query: 226 NFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPL 285
           NFWEM DTGPCGPC+EIHYD  G RDA+SLVN DDP  +E+WNIVF+Q+NR  +G L+ L
Sbjct: 225 NFWEMADTGPCGPCTEIHYDHIGGRDASSLVNADDPNVVELWNIVFMQYNRSRNGVLERL 284

Query: 286 PAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGA-RPYSGKVGADDADKVD 344
           P   VDTG+G ERL S+L N  SNYDTD+   +   I +       Y G         +D
Sbjct: 285 PKGCVDTGMGLERLCSVLNNTNSNYDTDLLNDVILYISELLPELESYKG-----GNSPLD 339

Query: 345 MAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNI 404
           +AYRVV+DHIR LS AI+D   P N+GR YVLRRILRRAVRY  +    ++ F + LV  
Sbjct: 340 VAYRVVSDHIRCLSVAISDRVYPSNDGRGYVLRRILRRAVRYCRDYFNTREPFLHRLVRS 399

Query: 405 VVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFI 464
           V K++G  +P L     +I  ++  EE  F +TL KG+EKFKK     + KV++GQDAF+
Sbjct: 400 VSKLLGHAYPNLVTERVNIESVVFDEERLFLQTLDKGVEKFKKMVAKSEVKVINGQDAFL 459

Query: 465 LWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERS--------RSAQNKQAGGAIV 516
           L+ +YGFPLDLT LMA E G+ VD+ G+   +   +++S         S +++       
Sbjct: 460 LYQSYGFPLDLTMLMARELGIGVDVIGYYTELKLHQQKSEARIYTDFNSVESRCDRLLKS 519

Query: 517 MDAD-ATAALHKRGVLATDDSFKFIWFQD------HKSVIKAIYTGSEFIESVVPGNE-- 567
           + AD     L     + TDD  K+ W          K+ + +I T    ++ +   ++  
Sbjct: 520 LSADRINTILQMCNNVYTDDKLKYDWDSSDPVRKVFKAKLLSIVTADSILKELEYDSDDL 579

Query: 568 VGIVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGE 627
           V +V   + FYAE GGQI+D G+I  L     V  V    G V H   L + +G    G+
Sbjct: 580 VCLVTDRTPFYAEGGGQIYDTGYINDL----EVLRVYKLSGLVFHF-CLADESGLLRCGD 634

Query: 628 EVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDP 687
           E   KVDY RR  +A NHT TH+LNF LR++L +   Q+GS +  EKL+FD+S+G+ +  
Sbjct: 635 ECELKVDYHRRVKVASNHTATHILNFVLRDILEESSYQRGSQLDEEKLKFDYSYGQQLPD 694

Query: 688 EHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDL 747
             +R++E  + E +++   + + E    +A  I G+RA F E YP+ VRVV +    ED 
Sbjct: 695 NLIRQVEQRMMEFVRSGAPLRTTEIEYKKALEIPGIRANFDEKYPEVVRVVNVQMGSEDF 754

Query: 748 LADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEA 807
             +         S E+CGGTHL+NT+  +  A++ EEGI+KG+RR+T VT     ++   
Sbjct: 755 SGE-------HTSTEVCGGTHLTNTKTIQDVAVVGEEGISKGVRRLTIVTNDQCRRSRID 807

Query: 808 ACSLEKEVDDASK-IEGSLLEKNQVRKAQKKVAEENLQKAVKVATET 853
             +  + + D  K ++     K+  R+A +  A EN+ K   +  E 
Sbjct: 808 LLNYYQRLGDLEKSLKPINFTKDDTREASEN-ASENMSKLTALRGEV 853


>gi|324509264|gb|ADY43900.1| Alanyl-tRNA synthetase [Ascaris suum]
          Length = 603

 Score =  671 bits (1730), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/594 (55%), Positives = 415/594 (69%), Gaps = 23/594 (3%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A +VR  F  FF ++ H    SS V+P  DPTLLFANAGMNQ+KPIFLGT DP+++L +L
Sbjct: 7   ANEVRSAFINFFANREHTYVHSSSVIPFEDPTLLFANAGMNQFKPIFLGTVDPSSELGRL 66

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWSFGDYFK E   WAWELLTK  
Sbjct: 67  RRAVNTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKEVCNWAWELLTKEL 126

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGP 238
            +PAD+LY +YFGGDEKAGLAPD+E R IWL   LP SRVLPFG KDNFWEMGD GPCGP
Sbjct: 127 GIPADQLYVSYFGGDEKAGLAPDDECRQIWLDIGLPESRVLPFGMKDNFWEMGDVGPCGP 186

Query: 239 CSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           CSEIH+DR GNRDA++LVN DDP  +EIWN+VF+Q+NRE  G L+ LP +H+D GLG ER
Sbjct: 187 CSEIHFDRVGNRDASALVNADDPMVVEIWNLVFMQYNREEGGVLRELPMRHIDCGLGLER 246

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L +++QNK SNYDTD F PIFDAIQ +   R YSGKVGA+D+D +DMAYRVVADHIRTL 
Sbjct: 247 LVAVMQNKTSNYDTDAFTPIFDAIQASVCVRAYSGKVGAEDSDGIDMAYRVVADHIRTLC 306

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
            A++DG  P + GR YVLRRILRR VRY +E L A  GFF  LV +VV+++GD FPEL++
Sbjct: 307 VALSDGGRPDSTGRGYVLRRILRRGVRYANEKLGAPPGFFASLVPVVVRLLGDTFPELRK 366

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKK--AAQDVQGKVLSGQDAFILWDTYGFPLDLT 476
               + +II  EEA F KTL +G   F+K  AA + + K   G  A+ L+DTYGFP+DLT
Sbjct: 367 DPETVMDIINDEEAQFLKTLNRGRSLFQKAVAALESEAKQFPGDIAWRLYDTYGFPVDLT 426

Query: 477 QLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDS 536
           QLMAEE+ L VD++ F     +A E S +  NK    A  +D    A L K GV +TDDS
Sbjct: 427 QLMAEEKQLSVDMDAFEQCRQKAVEMSSAGANKFRDTA-ELDVHGIAKLKKDGVPSTDDS 485

Query: 537 FKFIW-------------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGG 583
            K+ +             F   +  + A+     F++S+  G++  ++L  ++FYAEQGG
Sbjct: 486 PKYDYSAVGPNDITAKYSFAKCEGQVLALLKEGTFVDSLYSGDKGAVILDRTNFYAEQGG 545

Query: 584 QIFDEGFIEGL---FGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVD 634
           QI+D G +  +      F V NVQ+ GG+V+ +GS+    G  S+G+ ++  +D
Sbjct: 546 QIYDTGVLTKIGDEGAEFEVSNVQMRGGYVVLVGSVE---GNISIGDRLLQAID 596


>gi|431838320|gb|ELK00252.1| Putative alanyl-tRNA synthetase, mitochondrial [Pteropus alecto]
          Length = 983

 Score =  670 bits (1728), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/916 (42%), Positives = 533/916 (58%), Gaps = 76/916 (8%)

Query: 60  ATKVRDTFFKFFEDKN-HVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSK 118
           A  VRD F  FF D++ H    S+ V P  DPTLLF NAGMNQ+KPIFLGT DP ++++ 
Sbjct: 38  AAAVRDAFLSFFRDRHRHRLVPSASVRPRGDPTLLFVNAGMNQFKPIFLGTVDPRSEMAG 97

Query: 119 LTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFG-DYFKNEAIEWAWELLTK 177
             R  N+QKC+RAGG+HNDL+DVG+D  HHTFFEMLGNW+FG +YFK EA   AWELLT+
Sbjct: 98  FRRVANSQKCVRAGGRHNDLEDVGRDLSHHTFFEMLGNWAFGGEYFKEEACSMAWELLTQ 157

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPC 236
           VY +P DRL+ +YFGGD    L PD E+RDIWL   +PAS VL FG ++NFWEMGDTGPC
Sbjct: 158 VYGIPKDRLWISYFGGDPNTRLNPDLESRDIWLSLGVPASHVLSFGPQENFWEMGDTGPC 217

Query: 237 GPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGF 296
           GPC+EIHYD      A        P  +E+WN+VF+Q NRE+DGSL+PLP +HVDTG+G 
Sbjct: 218 GPCTEIHYDLADGVGA--------PQLVELWNLVFMQHNREADGSLQPLPQRHVDTGMGL 269

Query: 297 ERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRT 356
           ERL ++LQ + S YDTD+F P+ +AIQQ  GA PY G+VGA D  ++DMAYRVVADHIRT
Sbjct: 270 ERLVAVLQGRHSTYDTDLFSPLLNAIQQGCGAPPYLGRVGAADEGRIDMAYRVVADHIRT 329

Query: 357 LSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPEL 416
           LS  IADG  PG  G   VLRRILRRAVR+ +EVL+A  GF   LV +VV+ +GD +PEL
Sbjct: 330 LSVCIADGVSPGTSGAPLVLRRILRRAVRFSTEVLRAPLGFLGSLVPVVVETLGDTYPEL 389

Query: 417 KQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAF---ILWDT----- 468
           ++  A I  +++ +EA+F  +L +G     +       + L   D F   + W       
Sbjct: 390 QKNSAQIANLVSEDEAAFLASLQRGRRIIDRTL-----RRLGPSDLFPAEVAWSLSMSGD 444

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNN-AMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
            G PLDL +LM EE+G+ +D  G    A +EA+ R+R A+  Q  G + +   A   L  
Sbjct: 445 LGLPLDLIELMLEEKGMRLDSAGLARLAQEEAQHRARQAEPVQEQG-LQLGIHALGELQH 503

Query: 528 RGVLATDDSFKFIW---------FQDHKSVIKAIYT-GSEFIESVVPGNEVGIVLASSSF 577
           RGV  TDDS K+ +         F   ++ +  +YT     + SV  G   G++L  ++F
Sbjct: 504 RGVPPTDDSPKYNYCLLPSGGYEFSTCEAQVLQLYTEDGTAVASVGEGQRCGLLLDKTNF 563

Query: 578 YAEQGGQIFDEGFIEGLFGS---FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVD 634
           YAEQGGQ  D G++  +      F V   Q+ GGF++H     E      VG++V   VD
Sbjct: 564 YAEQGGQASDRGYLVRVGQQDVLFPVARAQVCGGFILHEMVAPEC---LKVGDQVQLHVD 620

Query: 635 YDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIE 694
              R      HT TH+LN+ALR+ LG   +Q+GS + PE+LRFD +   P+ PE LR +E
Sbjct: 621 KAWRLGCMEKHTATHLLNWALRQALGPGTEQRGSHLNPERLRFDVATQAPLTPEQLRAVE 680

Query: 695 SIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENK 754
           + V + +  +  V+ +E  LA    + GLR+   EVYPDPVRVV++G  V   L DP ++
Sbjct: 681 NTVQKAVGQDEAVYMEEVALAHTAHVPGLRS-LDEVYPDPVRVVSVGVPVAHAL-DPASQ 738

Query: 755 EWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKE 814
             L  S ELC GTHL +T       ++ E  + KG  R+ A+T   A +A E   SL +E
Sbjct: 739 AALQTSVELCCGTHLLHTGSIGDLVIIGERQLTKGTTRLLAITGEQAQQAREVGQSLAQE 798

Query: 815 VDDASK---------IEGSLLEKNQVR-------KAQKKVAEENLQKAVKVATETAEAAA 858
           V+ A++         +E   L K+  R           +     LQ  +KV    A  A 
Sbjct: 799 VEAAAERLSRGSRDVVEAQRLSKDMGRLTDAIDTAVMPQWQRRELQATLKVLQRRANTA- 857

Query: 859 SNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQS 918
                  + ++E+G  A   +E    ++++   P++V  T  T + +V+   V +  +Q+
Sbjct: 858 -------VRKLEMGQAAQKTQE----LLQRHSGPLIV-DTVSTESLSVLVKVVRQLCEQA 905

Query: 919 KQLEVSEWLTAALQPL 934
               V   L  + QPL
Sbjct: 906 PSTSV---LLLSPQPL 918


>gi|326678670|ref|XP_001332388.4| PREDICTED: alanyl-tRNA synthetase, mitochondrial [Danio rerio]
          Length = 1001

 Score =  669 bits (1725), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/971 (41%), Positives = 537/971 (55%), Gaps = 66/971 (6%)

Query: 56  VEWPATKVRDTFFKFF-EDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNT 114
           VE+ + +VR  F  FF E   H    SS V P  DP+LLF NAGMNQ+KPI LG ADP +
Sbjct: 37  VEFTSKRVRRKFIDFFREGYGHRVVPSSSVRPRGDPSLLFVNAGMNQFKPILLGCADPRS 96

Query: 115 QLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWEL 174
           ++    R  N+QKC+RAGGKHNDL DVGKD YHHTFFEMLGNWSFGDYFK EA   AW L
Sbjct: 97  EMVSYRRVVNSQKCVRAGGKHNDLQDVGKDVYHHTFFEMLGNWSFGDYFKVEACAMAWRL 156

Query: 175 LTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDT 233
           LT+ Y +PA RLY +YF GD   GL  D E RDIWL   L A  VLPFG KDNFWEMG+T
Sbjct: 157 LTEEYGIPAQRLYVSYFSGDPANGLPADEETRDIWLSMGLRADHVLPFGMKDNFWEMGET 216

Query: 234 GPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTG 293
           GPCGPC+EIHYD  GNR+AA LVN D P  +EIWN+VF+Q+NRES+GSL+ LP   VDTG
Sbjct: 217 GPCGPCTEIHYDHIGNRNAALLVNADSPDVVEIWNLVFMQYNRESNGSLRALPQCSVDTG 276

Query: 294 LGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADH 353
           +G ERL ++LQ K SNYDTD+F P+  AI Q + A  Y G+ GA D  ++DMAYRVVADH
Sbjct: 277 MGLERLVTVLQGKRSNYDTDLFTPLLSAIHQCSKAPAYQGRTGAADVAQLDMAYRVVADH 336

Query: 354 IRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVF 413
           IRT+   IADG  PG  G E VLRRILRRAVR+ +EVL+A +G    LV  V  ++GD +
Sbjct: 337 IRTICVCIADGVYPGMAGAELVLRRILRRAVRFSTEVLQAPEGALASLVPTVAHLLGDAY 396

Query: 414 PELKQREAHIREIIAAEEASFGKTLLKGIEKFKK--AAQDVQGKVLSGQDAFILWDTYGF 471
           PEL      I ++I   EA F  +L +G     +  +  D          A+ L+   GF
Sbjct: 397 PELNTESDRIMDLINQNEAHFLSSLKQGRRVIDRTLSNMDENSSFFPASVAWSLYRNLGF 456

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDL  LM EE+G +VD +      DE  +    ++  +      +D  + A L ++ V 
Sbjct: 457 PLDLIDLMLEEKGKIVDKKEMKVLEDEYEKLGLQSEEDEGEKLDQLDLHSLAELQRQRVP 516

Query: 532 ATDDSFKFIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQG 582
            TDDS K+ +         F+  K+ + A+Y     +  V  G    ++L  +SFYAEQG
Sbjct: 517 HTDDSPKYCYSVGSDGQYVFEPCKASVLALYCDGALVSEVRQGQHCAVILDQTSFYAEQG 576

Query: 583 GQIFDEGFI--EGLFGSFY-VRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRK 639
           GQ  D+G+   +GL    + V+ V++ GG+V+H  +  E       G++V   VD   R 
Sbjct: 577 GQANDQGYFTKDGLQDVLFPVKCVRLAGGYVVHKVTAAE---TLRTGDQVHLHVDEAWRL 633

Query: 640 LIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNE 699
               NHT TH+LNFALRE+LG  V Q+GS     +LRFDFS    +    L+++E +V  
Sbjct: 634 GCMINHTATHVLNFALRELLGPIVSQRGSHCSANRLRFDFSVKGTLTVSELQKVEELVLN 693

Query: 700 QIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSI 759
            I+   DV  +E  L+ AK I GLR V  E+YPDPVRVV++   V DLLA    ++    
Sbjct: 694 IIRQNADVHVEEVPLSSAKQIAGLRTV-DELYPDPVRVVSVAVPVSDLLASERAEQ---T 749

Query: 760 SAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDAS 819
           S ELC GTHL  T     F ++SE  + KG+ RI A T   A KA EA  +L++E++   
Sbjct: 750 SVELCCGTHLLRTGAIRDFVVVSERQMMKGVCRIVAFTGDDAIKAREAGQALQEELESLE 809

Query: 820 KIEG--SLLEKNQVRKAQKKVAEENLQKAV---------KVATETAEAAASNGKPFCISR 868
              G  + L   + ++  K+V   +L  AV         ++  +T   A        I +
Sbjct: 810 ARMGLSNTLSIQEAKRLSKEVG--HLINAVDITPMPQWKRLELQTRLKAMLKSSNNSIRK 867

Query: 869 VEVG---------LDAAAVREAVLKVIE--------------QKGMP---VMVFSTDETT 902
           +E+          LD  + +  V+ +I+               K  P   VM+FS  E++
Sbjct: 868 LEIKEAALKAKELLDKHSNKPVVVDLIQTDSISVLMKTVVQLSKSTPKSLVMLFSHWESS 927

Query: 903 NKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRC-GKGKGGLASGQGTDAAQVTPAMD 961
            K +    VP+ S     +   EW  +    L G   G        G       V   + 
Sbjct: 928 GKLLCACLVPKGSTGGSAI---EWALSVCSRLGGNAEGAKDTAKGVGNAVKVEDVAEILH 984

Query: 962 LAAEFAAMKLR 972
            A EFA  K+R
Sbjct: 985 WAEEFAHNKIR 995


>gi|344263708|ref|XP_003403938.1| PREDICTED: alanyl-tRNA synthetase, mitochondrial [Loxodonta
           africana]
          Length = 985

 Score =  668 bits (1724), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 360/787 (45%), Positives = 488/787 (62%), Gaps = 44/787 (5%)

Query: 59  PATKVRDTFFKFFEDKN-HVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLS 117
           PAT VRD F  FF D++ H    S+ V P  DP+LLF NAGMNQ+KPIFLGT DP ++++
Sbjct: 38  PATAVRDAFLSFFRDRHGHRLVPSASVRPRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMA 97

Query: 118 KLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFG-DYFKNEAIEWAWELLT 176
              R  N+QKC+RAGG+HNDL+DVG+D  HHTFFEMLG+W+FG +YFK EA   AWELLT
Sbjct: 98  GFRRVANSQKCVRAGGRHNDLEDVGRDLSHHTFFEMLGSWAFGGEYFKKEACSMAWELLT 157

Query: 177 KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGP 235
           +VY +P DRL+ +YFGGD KA L PD E RDIWL   +PASRVL  G ++NFWEMGDTGP
Sbjct: 158 QVYGIPEDRLWVSYFGGDPKARLDPDLETRDIWLSLGVPASRVLSLGPQENFWEMGDTGP 217

Query: 236 CGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           CGPC+EIHYD  G   A        P  +E+WN+VF+Q NRE+DGSL+PLP +HVDTG+G
Sbjct: 218 CGPCTEIHYDLAGGTGA--------PQLVELWNLVFMQHNRETDGSLQPLPQRHVDTGMG 269

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
            ERL ++LQ + S YDTD+F P+ +AI Q  GA PY G+VGA D  +VD AYRVVADHIR
Sbjct: 270 LERLVAVLQGRRSTYDTDLFSPLLNAIHQGCGAPPYLGRVGAADEGRVDTAYRVVADHIR 329

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPE 415
            LS  IADG  PG  G   VLRRILRRAVR+ +E+L+A  GF   LV +VV+ +GD++PE
Sbjct: 330 MLSVCIADGVSPGMSGAPLVLRRILRRAVRFATEILRAPPGFLGSLVPVVVETLGDIYPE 389

Query: 416 LKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAF---ILWDT---- 468
           L++  A I  +++ +EA+F  +L +G +   +       + L   D F   + W      
Sbjct: 390 LQKNSAQIASLVSDDEAAFLASLQRGRQIIDRTL-----RRLGPSDMFPAEVAWSLSLSG 444

Query: 469 -YGFPLDLTQLMAEERGLLVDIEGFNN-AMDEARERSRSAQNKQAGGAIVMDADATAALH 526
             G PLDL +LM EE+G+ +D  G    A +EA+ R++ A+  +  G + +D  A   L 
Sbjct: 445 HLGLPLDLVELMLEEKGVQLDSAGLERLAREEAQHRAQQAEPARKQG-MRLDVHALGELR 503

Query: 527 KRGVLATDDSFKFIW---------FQDHKSVIKAIYT-GSEFIESVVPGNEVGIVLASSS 576
           ++GV  TDDS K+ +         F+  ++ +  +YT     + S+  G   G++L  ++
Sbjct: 504 RQGVPLTDDSPKYNYFLRPTGGYEFRACEAQVLQLYTEDGTAVTSIGGGQRCGLLLDRTN 563

Query: 577 FYAEQGGQIFDEGFI---EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKV 633
           FYAEQGGQ  D G++   E     F V   Q+ GGF++H     E      VG++V   V
Sbjct: 564 FYAEQGGQASDRGYLVRAEQQDVLFPVARAQVCGGFILHEAVAPEC---LQVGDQVQLHV 620

Query: 634 DYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRI 693
           D   R      HT TH+LN+ALR+ LG   +Q+GS + PE+LR D +   P+ P+ L+ +
Sbjct: 621 DKAWRLGCMEKHTATHLLNWALRQALGPGTEQRGSHLNPERLRLDVATQAPLTPQQLQAV 680

Query: 694 ESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPEN 753
           E  V E +  +  V++ E  LA    + GLR+   EVYPDPVRVV++G  V   L DP +
Sbjct: 681 EGAVQEAVGQDEPVYTDEVALALTAQVPGLRS-LDEVYPDPVRVVSVGVPVAQAL-DPAS 738

Query: 754 KEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEK 813
           +  L  S ELC GTHL  T       ++ E  +AKG  R+ A+T   A +A E   SL +
Sbjct: 739 QAALQTSVELCCGTHLLRTGAVGDLVIIGERQLAKGTTRLLAITGEQAQQAREVGQSLAQ 798

Query: 814 EVDDASK 820
           EV  A++
Sbjct: 799 EVKAAAE 805


>gi|389584375|dbj|GAB67107.1| alanyl-tRNA synthetase [Plasmodium cynomolgi strain B]
          Length = 1012

 Score =  667 bits (1721), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 402/1014 (39%), Positives = 560/1014 (55%), Gaps = 121/1014 (11%)

Query: 25  LTLAVTNHHHSLISRFSASAVAAMPGADPQVVEWPATKVRDTFFKFFEDKNHVNWKSSPV 84
           L   V  H    +S   AS         P +    A +VR  F  +F++KNH   +S+ V
Sbjct: 19  LNGVVGGHDDGFVSTVKASEKGPALSTRPTL---SAEEVRSGFINYFKEKNHTVVESASV 75

Query: 85  VPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKD 144
           +P ND TLLF NAGMNQ+K IFLG  D ++ L KL RA +TQKCIRAGGKHNDLDDVGKD
Sbjct: 76  IPYNDNTLLFTNAGMNQFKKIFLGQVDKSSDLGKLKRAVDTQKCIRAGGKHNDLDDVGKD 135

Query: 145 TYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDN- 203
            YHHTFFEMLGNWSFGDYFK E+I++AW+LLT VY++  +RLY TYFGGDEK    P++ 
Sbjct: 136 VYHHTFFEMLGNWSFGDYFKEESIDYAWDLLTNVYKIDPNRLYVTYFGGDEKLPSCPEDL 195

Query: 204 EARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTC 263
           E + IWLK++  SR+LPFG K+NFWEM +TGPCGPCSEIHYDR G RDA +LVN DDP+ 
Sbjct: 196 ETKKIWLKYVDESRILPFGMKENFWEMAETGPCGPCSEIHYDRIGKRDATNLVNKDDPSV 255

Query: 264 IEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQ 323
           +EIWNIVF+Q+N++   ++  LP   +DTG+G ER+TSILQN  S               
Sbjct: 256 LEIWNIVFMQYNKDEKKNMNKLPFPCIDTGMGLERITSILQNVES--------------- 300

Query: 324 QATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRA 383
                     KV  +D D++D AYRVV+DHIR ++ AI+DG  PGNEGR YV+RRI+RRA
Sbjct: 301 ----------KVNEEDVDRIDYAYRVVSDHIRCVTIAISDGCLPGNEGRNYVIRRIIRRA 350

Query: 384 VRYGSEVLKAQDG--FFNGLVNIVVKVMGDVFPELKQ--REAHIREIIAAEEASFGKTLL 439
           +R G ++ +      +F  LV+ V  ++   F +L+   R  +I+ II  EE  F +TL 
Sbjct: 351 IRVGKQIFQVGSNVLWFYKLVDSVCHILKKCFTDLQNEDRVNYIKNIIKQEEMVFNRTLE 410

Query: 440 KGIEKFKKAAQDVQG----KVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNA 495
           KG+++F K  +         + SG+DAF L+ +YGFP+DL Q+M EE+   +++  FN  
Sbjct: 411 KGVDQFNKIIKRSNNAGGDNLFSGKDAFELYTSYGFPIDLVQIMCEEKNFKLNMSEFNEL 470

Query: 496 MDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQDHK--------S 547
             + +  S +   K      +    A     K GV AT+D +K+ W  D +        +
Sbjct: 471 FRKHQLVSDTNNFKMNKFFDLPVEKAHELKQKHGVEATEDHYKYEWNNDDRKNDMAKVET 530

Query: 548 VIKAIYTGSEFIESV-VPGNE--VGIVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQ 604
            I  IY G  F++S+  P  +    ++L  ++FY E GGQI+D G I+     F V NVQ
Sbjct: 531 DIVVIYDGENFLDSIKTPSKDKKYALILRKTNFYYENGGQIYDTGVIQNEQMKFQVLNVQ 590

Query: 605 IYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHV- 663
               +V+HIG L E  G+    + V   V++DRRKL+A NHT TH+LNF +++VL ++V 
Sbjct: 591 KMNEYVLHIGVLQE--GKIEKNDSVHTVVNFDRRKLVACNHTATHLLNFVIKKVLTEYVI 648

Query: 664 -----------------------------DQKGSVVLPEKLRFDFSHGKPVDPEHLRRIE 694
                                        DQKGS+V  EKLRFDFS  + V  E + +IE
Sbjct: 649 HGKGDTKNGDLVHTKNEKEQAGVNSIFNCDQKGSLVDDEKLRFDFSFFQNVSDELVSKIE 708

Query: 695 SIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENK 754
           S VN+ IK EL V  +   L E+K I G+RA+F E Y D V VV I   VE +L   +  
Sbjct: 709 SQVNDLIKQELAVSVRTMDLKESKKIKGIRAIFEEDYADVVNVVFIDNDVEKILNHLDVN 768

Query: 755 EWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKA---FEAACSL 811
                S ELCGGTH++NT+  + F + SEE I KGI RI AVT   A +    F+   + 
Sbjct: 769 YSYLCSIELCGGTHIANTKFIKKFIITSEESIGKGIYRINAVTNKKAEEVEAKFDHLLAK 828

Query: 812 EKEV-DDASKIEGSL------------------LEKNQVRKAQKKVAEENLQKAVKVATE 852
            K + +D +  EG L                  + KN++    +K+ +  ++K   +  E
Sbjct: 829 YKHIFEDPN--EGKLADVQMYKRVLKEDKFLPYIRKNEILDKLEKIEKNIIEKTKNMQKE 886

Query: 853 TAEAAASNGKPFCISR-----VEVGL-DAAAVREAVLKVIEQ-----KGMPVMVFSTDET 901
               A + GK + +       V+V L D  +  + VL+ I Q       +    F  D+ 
Sbjct: 887 LFNKATTIGKDYALEDKSGVLVDVKLFDTLSGNQKVLEKIAQSYCKHNKLCSYFFIIDDE 946

Query: 902 TNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGK----GGLASGQGT 951
            N    C    + S +   ++   ++   +Q ++G  G GK    G  A G+G 
Sbjct: 947 KN--TYCVFEMKDSLKGTTIQADAFMKEIMQSVEGHSGGGKNKAFGSAAKGKGV 998


>gi|194039401|ref|XP_001929628.1| PREDICTED: alanyl-tRNA synthetase, mitochondrial [Sus scrofa]
          Length = 985

 Score =  664 bits (1712), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/786 (45%), Positives = 483/786 (61%), Gaps = 44/786 (5%)

Query: 60  ATKVRDTFFKFFEDKN-HVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSK 118
           A  VRD F  FF D++ H    S+ V P  DPTLLF NAGMNQ+KPIFLGT DP ++++ 
Sbjct: 39  AAAVRDAFLSFFRDRHGHRLVPSASVRPRGDPTLLFVNAGMNQFKPIFLGTVDPRSEMAG 98

Query: 119 LTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFG-DYFKNEAIEWAWELLTK 177
             R  N+QKC+RAGG+HNDL+DVG+D  HHTFFEMLGNW+FG +YFK EA   AWELLT+
Sbjct: 99  FRRVANSQKCVRAGGRHNDLEDVGQDLSHHTFFEMLGNWAFGGEYFKEEACSMAWELLTQ 158

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPC 236
           VY +P DRL+ +YFGGD KAGL  D E+RDIWL   +PASRVL FG ++NFWEMGDTGPC
Sbjct: 159 VYGIPEDRLWVSYFGGDPKAGLGADLESRDIWLNLGVPASRVLSFGPQENFWEMGDTGPC 218

Query: 237 GPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGF 296
           GPC+EIHYD  G   A        P  +E+WN+VF+Q NRE+DGSL+PLP +HVDTG+G 
Sbjct: 219 GPCTEIHYDLAGGVGA--------PQLVELWNLVFMQHNREADGSLQPLPQRHVDTGMGL 270

Query: 297 ERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRT 356
           ERL ++LQ K S YDTD+F P+ +AI Q  GA PYSG+VGA D   +D AYRVVADHIRT
Sbjct: 271 ERLVAVLQGKHSTYDTDLFSPLLNAIHQGCGAPPYSGRVGAADEGHIDTAYRVVADHIRT 330

Query: 357 LSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPEL 416
           LS  IADG  PG  G   ++RRILRRAVR+ +EVL+A  GF   LV +VV+ +G  +PEL
Sbjct: 331 LSICIADGVSPGMSGAPLIVRRILRRAVRFSTEVLRAPPGFLGSLVPVVVETLGGAYPEL 390

Query: 417 KQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAF---ILWD-----T 468
            +  A I  +++ +EA+F  +L +G    ++       K L   D F   + W       
Sbjct: 391 HKNSAQIVSLVSEDEAAFLASLQRGRRIIERTL-----KRLGPSDVFPAEVAWSLSLSGN 445

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNN-AMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
            G PLDL +LM EE+G+ +D  G    A +EA+ R++ A+  Q  G + +D  A   L +
Sbjct: 446 LGLPLDLVELMLEEKGVQLDSAGLARLAQEEAQHRAQQAEPVQEQG-LRLDVHALGELQR 504

Query: 528 RGVLATDDSFKFIW---------FQDHKSVIKAIYT-GSEFIESVVPGNEVGIVLASSSF 577
           RGV  TDDS K+ +         F   ++ +  +Y      + +   G   G++L  ++F
Sbjct: 505 RGVPPTDDSPKYSYSLRPSGGYEFSTCEARVLQLYAEDGRAVATTGEGQRYGLLLDRTNF 564

Query: 578 YAEQGGQIFDEGF---IEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVD 634
           YAEQGGQ  D G+   +E     F V   Q+ GGF++H     E      VG+ V   VD
Sbjct: 565 YAEQGGQASDRGYLVRVEQQDVLFPVAQAQVCGGFILHEVVAPEC---LKVGDRVQLHVD 621

Query: 635 YDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIE 694
              R      HT  H+LN+ALR+ LG   +Q+GS + PE+LRFD +   P+ P+ L+ +E
Sbjct: 622 EAWRLSCMEKHTAAHLLNWALRKALGPSTEQRGSHLSPERLRFDVATQAPLTPKQLQAVE 681

Query: 695 SIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENK 754
             V E +  +  V+ +E  LA    + GLR+   EVYPDPVRVV++G  V   L +P ++
Sbjct: 682 DTVQEAVGRDEAVYMEEVALARTTHVPGLRS-LDEVYPDPVRVVSVGVPVAHAL-EPASQ 739

Query: 755 EWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKE 814
             L  S ELC GTHL  T       ++ E  +AKG  R+ A+T   A +A E   SL +E
Sbjct: 740 AALQTSVELCCGTHLLRTGAIGDLVIVGERQLAKGTTRLLAITGEQARQAREVGQSLAQE 799

Query: 815 VDDASK 820
           V+ A++
Sbjct: 800 VEAAAE 805


>gi|449283236|gb|EMC89917.1| putative alanyl-tRNA synthetase, mitochondrial, partial [Columba
           livia]
          Length = 909

 Score =  662 bits (1709), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/921 (42%), Positives = 526/921 (57%), Gaps = 63/921 (6%)

Query: 102 YKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGD 161
           +KPIFLGT  P ++L++  R  N+QKC+RAGGKHNDL+DVG+DTYHHTFFEMLGNWSFGD
Sbjct: 1   FKPIFLGTVHPRSELAQHRRGGNSQKCVRAGGKHNDLEDVGRDTYHHTFFEMLGNWSFGD 60

Query: 162 YFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLP 220
           YFK  A   AWELLT+VY +P DRLY TYFGGD   GL+ D E +D+WL+  +PAS VLP
Sbjct: 61  YFK--ARHMAWELLTEVYEIPRDRLYVTYFGGDSLLGLSADEECKDVWLRLGVPASHVLP 118

Query: 221 FGCKDNFWEMGDTGPCGPCSEIHYDRTGN-RDAASLVNNDDPTCIEIWNIVFIQFNRESD 279
           F  KDNFWEMGDTGPCGPC+EIHYD  G  R+AA+LVN   P  +EIWN+VF+Q++RE +
Sbjct: 119 FPLKDNFWEMGDTGPCGPCTEIHYDHVGGGRNAAALVNKGSPDVVEIWNLVFMQYSREVE 178

Query: 280 GSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADD 339
           G+L PLP  HVDTG+G ERL ++LQNK SNYDTD+F PI DAI +  G   Y G VG  D
Sbjct: 179 GNLLPLPQHHVDTGMGLERLVTVLQNKRSNYDTDLFTPILDAIHKGCGGPRYQGLVGDAD 238

Query: 340 ADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFN 399
              V+MAYRVVADH+RTL   I DG  PG  G E VLRRILRRAVR+ SEVL A  G   
Sbjct: 239 VGCVNMAYRVVADHVRTLCVCITDGIYPGLSGAELVLRRILRRAVRFCSEVLHAPPGLLA 298

Query: 400 GLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKV-LS 458
            LV  VV+V+G+ +PEL + E  I +II   EA+F  +L +G    ++  Q ++      
Sbjct: 299 SLVPTVVEVLGNAYPELTKNEDQIMDIINENEAAFLSSLERGRRIIERTVQQMEPSTNFP 358

Query: 459 GQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNN-AMDEARERSRSAQNKQAGGA-IV 516
            + A+ L+   GFPLDL  LM EE+G+ +D   FN  A+++A  ++   Q  Q       
Sbjct: 359 AEVAWSLYANLGFPLDLIDLMLEEKGISLDSAAFNELALEDAERKAGGPQAGQRDDTNTR 418

Query: 517 MDADATAALHKRGVLATDDSFKFIW---------FQDHKSVIKAIYTGSEFIESVVPGNE 567
           +D  + A L    V ATDDS K+ +         F   ++ I  +Y G    + V  G  
Sbjct: 419 LDVHSLAQLQSDNVPATDDSPKYAYRLGQHGQYEFSPCQATILMLYRGQSLQKEVGSGQR 478

Query: 568 VGIVLASSSFYAEQGGQIFDEGFIEGLFGS---FYVRNVQIYGGFVIHIGSLTEGAGRFS 624
            G++L  ++FYAEQGGQ  D+G++  L      F V +VQ+ GG+VIH  +  E      
Sbjct: 479 CGVILDRTNFYAEQGGQDSDQGYMMRLGQQDILFPVESVQLCGGYVIHEVTAVE---TLR 535

Query: 625 VGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKP 684
            G++V   VD  +R     NHT TH+LNFA+R VLGD+ +Q+GS V  E+LRFDF    P
Sbjct: 536 AGDQVQLFVDEAKRLACMTNHTATHLLNFAIRHVLGDNTEQRGSHVTAERLRFDFDTKGP 595

Query: 685 VDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKV 744
           V  E L+++E +V + IK    V   E  L  A+ + GLRAV  E YPDPVR+V++G  V
Sbjct: 596 VTVEQLQQVEQVVQDVIKQNEVVHMAEVPLTLAREVQGLRAV-DEGYPDPVRIVSLGVPV 654

Query: 745 EDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKA 804
           E +L   +++  +  S ELC GTHL  T   E   ++SE  + KGI R+ AVT G A +A
Sbjct: 655 ESVLTR-DSEAAMQTSVELCCGTHLLQTGAVEDLTIISERQLVKGISRVIAVTGGQAKQA 713

Query: 805 FEAACSLEKEVDDAS-----------KIEGSLLEKNQVRKAQKKVA-----EENLQKAVK 848
            E    L  EVD  S           +++    E  Q+ K     A      + LQ  +K
Sbjct: 714 REVGQCLAMEVDSVSLRMKQRSTSIPEMQNLSKEVGQLTKVVASTAMPQWQRKELQAILK 773

Query: 849 VATETA-------------EAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQ-----KG 890
               TA             E   S     C   V +    A     ++KV+ Q      G
Sbjct: 774 ALQRTANTAIRKLEIQQAEEKVQSLLAKHCNQPVIIDTVPADSLSILMKVVNQLCDKSPG 833

Query: 891 MPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQG 950
             V++ S   +    V+CA    K +       ++W  A    ++G+ G G   +A G G
Sbjct: 834 TSVLLLSPQASGE--VLCACQVSK-NCLPVFSAADWAVAVCTQMEGKAG-GSPIVAKGSG 889

Query: 951 TDAAQVTPAMDLAAEFAAMKL 971
            +A  +  A+  A EFA  KL
Sbjct: 890 -NAKDIQGALTTALEFAQSKL 909


>gi|126632676|emb|CAM56636.1| novel protein similar to vertebrate aminolevulinate delta-synthase
           1 (ALAS1) [Danio rerio]
          Length = 917

 Score =  662 bits (1708), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 400/938 (42%), Positives = 526/938 (56%), Gaps = 54/938 (5%)

Query: 62  KVRDTFFKFF-EDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLT 120
           +VR  F  FF E   H    SS V P  DP+LLF NAGMNQ+KPI LG ADP +++    
Sbjct: 1   RVRRKFIDFFREGYGHRVVPSSSVRPRGDPSLLFVNAGMNQFKPILLGCADPRSEMVSYR 60

Query: 121 RACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYR 180
           R  N+QKC+RAGGKHNDL DVGKD YHHTFFEMLGNWSFGDYFK EA   AW LLT+ Y 
Sbjct: 61  RVVNSQKCVRAGGKHNDLQDVGKDVYHHTFFEMLGNWSFGDYFKVEACAMAWRLLTEEYG 120

Query: 181 LPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +PA RLY +YF GD   GL  D E RDIWL   L A  VLPFG KDNFWEMG+TGPCGPC
Sbjct: 121 IPAQRLYVSYFSGDPANGLPADEETRDIWLSMGLRADHVLPFGMKDNFWEMGETGPCGPC 180

Query: 240 SEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERL 299
           +EIHYD  GNR+AASLVN D P  +EIWN+VF+Q+NRES+GSL+ LP   VDTG+G ERL
Sbjct: 181 TEIHYDHIGNRNAASLVNADSPDVVEIWNLVFMQYNRESNGSLRALPQCSVDTGMGLERL 240

Query: 300 TSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSF 359
            ++LQ K SNYDTD+F P+  AI Q + A  Y G+ GA D  ++DMAYRVVADHIRT+  
Sbjct: 241 VTVLQGKRSNYDTDLFTPLLSAIHQCSKAPAYQGRTGAADVAQLDMAYRVVADHIRTICV 300

Query: 360 AIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQR 419
            IADG  PG  G E VLRRILRRAVR+ +EVL+A +G    LV  V  ++GD +PEL   
Sbjct: 301 CIADGVYPGMAGAELVLRRILRRAVRFSTEVLQAPEGALASLVPTVANLLGDAYPELNTE 360

Query: 420 EAHIREIIAAEEASFGKTLLKGIEKFKK--AAQDVQGKVLSGQDAFILWDTYGFPLDLTQ 477
              I ++I   EA F  +L +G     +  +  D          A+ L+   GFPLDL  
Sbjct: 361 SDRIMDLINQNEAHFLSSLKQGRRVIDRTLSNMDENSSFFPASVAWSLYRNLGFPLDLID 420

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSF 537
           LM EE+G +VD +      DE  E+S   + ++      +D  + A L ++ V  TDDS 
Sbjct: 421 LMLEEKGKIVDKKEMKVLEDEY-EKSEEDEGEKLDQ---LDLHSLAELQRQRVPHTDDSP 476

Query: 538 KFIW---------FQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDE 588
           K+ +         F+  K+ + A+Y     +  V  G    ++L  +SFYAEQGGQ  D+
Sbjct: 477 KYCYSVGSDGQYVFEPCKASVLALYCDGALVSEVRQGQHCAVILDQTSFYAEQGGQANDQ 536

Query: 589 GFI--EGLFGSFY-VRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
           G+   +GL    + V+ V++ GG+V+H  +  E       G++V   VD   R     NH
Sbjct: 537 GYFTKDGLQDVLFPVKCVRLAGGYVVHKVTAAE---TLRTGDQVHLHVDEAWRLGCMINH 593

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           T TH+LNFALRE+LG  V Q+GS     +LRFDFS    +    L+++E +V   I+   
Sbjct: 594 TATHVLNFALRELLGPVVSQRGSHCSANRLRFDFSVKGSLTVSELQKVEELVLNIIRQNA 653

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
           DV  +E  L+ AK I GLR V  E+YPDPVRVV++   V DLLA    ++    S ELC 
Sbjct: 654 DVHVEEVPLSSAKQIAGLRTV-DELYPDPVRVVSVAVPVSDLLASERAEQ---TSVELCC 709

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEG-- 823
           GTHL  T     F ++SE  + KG+ RI A T   A KA EA  +L++E++      G  
Sbjct: 710 GTHLLRTGAIRDFVVVSERQMMKGVCRIVAFTGDDAIKAREAGQALQEELESLEARMGLS 769

Query: 824 SLLEKNQVRKAQKKVAEE-------NLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
           + L  ++ ++  K+V  +        + +  ++  +T   A        I ++E      
Sbjct: 770 NTLSIHEAKRLSKEVGHQINAVDITPMPQWKRLELQTRLKAVLKSSNNSIRKLE------ 823

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKS-DQSKQLEVSEWLTAALQPLK 935
            ++EA LK  E           D+ +NK VV   +   S   S      EW  +    L 
Sbjct: 824 -IKEAALKAKEL---------LDKHSNKPVVVDLIQTDSISGSTGGSAIEWALSVCSRLG 873

Query: 936 GRC-GKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKLR 972
           G   G        G       V   +  A EFA  K+R
Sbjct: 874 GNAEGAKDTAKGVGNAVKVEDVAEILHWAEEFAHNKIR 911


>gi|52630311|ref|NP_941010.2| alanine--tRNA ligase, mitochondrial precursor [Mus musculus]
 gi|115502845|sp|Q14CH7.1|SYAM_MOUSE RecName: Full=Alanine--tRNA ligase, mitochondrial; AltName:
           Full=Alanyl-tRNA synthetase; Short=AlaRS; Flags:
           Precursor
 gi|109730201|gb|AAI13780.1| Alanyl-tRNA synthetase 2, mitochondrial (putative) [Mus musculus]
 gi|109730687|gb|AAI13173.1| Alanyl-tRNA synthetase 2, mitochondrial (putative) [Mus musculus]
          Length = 980

 Score =  660 bits (1704), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/824 (44%), Positives = 500/824 (60%), Gaps = 60/824 (7%)

Query: 63  VRDTFFKFFEDKN-HVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           VRD F  FF D++ H    S+ V P  DP+LLF NAGMNQ+KPIFLGT DP ++++   R
Sbjct: 37  VRDAFLSFFRDRHGHRLVPSATVRPRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRR 96

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFG-DYFKNEAIEWAWELLTKVYR 180
             N+QKC+RAGG+HNDL+DVG+D  HHTFFEMLGNW+FG +YFK EA   AWELLT+VY 
Sbjct: 97  VVNSQKCVRAGGRHNDLEDVGRDLSHHTFFEMLGNWAFGGEYFKEEACSMAWELLTQVYG 156

Query: 181 LPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +P DRL+ +YF GD + GL PD E RDIWL   +PASRVL FG ++NFWEMGDTGPCGPC
Sbjct: 157 IPEDRLWVSYFSGDSQTGLDPDLETRDIWLSLGVPASRVLSFGPQENFWEMGDTGPCGPC 216

Query: 240 SEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERL 299
           +EIHYD  G   +        P  +E+WN+VF+Q  RE+DGSL+ LP +HVDTG+G ERL
Sbjct: 217 TEIHYDLAGGVGS--------PQLVELWNLVFMQHYREADGSLQLLPQRHVDTGMGLERL 268

Query: 300 TSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSF 359
            ++LQ K S YDTD+F P+ DAI Q+ GA PYSG+VGA D  ++D AYRVVADHIRTLS 
Sbjct: 269 VAVLQGKRSTYDTDLFSPLLDAIHQSCGAPPYSGRVGAADEGRIDTAYRVVADHIRTLSV 328

Query: 360 AIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQR 419
            IADG  PG  G   VLRRILRRAVRY +EVL+A  GF   LV +VV+ +G  +PEL++ 
Sbjct: 329 CIADGVSPGMSGAPLVLRRILRRAVRYSTEVLQAPPGFLGSLVPVVVETLGSAYPELEKN 388

Query: 420 EAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAF---ILWD-----TYGF 471
              I  +++ +EA+F  +L +G     +       K L   D F   + W        G 
Sbjct: 389 SVKIASLVSEDEAAFLASLQRGRRIIDRTV-----KRLGPSDLFPAEVAWSLSLSGNLGI 443

Query: 472 PLDLTQLMAEERGLLVDIEGFNN-AMDEARERSRSAQNKQAGGAIVMDADATAALHKRGV 530
           PLDL +LM EE+G+ +D  G    A  EA+ R++ A+  Q    + +D  A   LH++G+
Sbjct: 444 PLDLVELMLEEKGVKLDTAGLEQLAQKEAQHRAQQAEADQE-DRLCLDVHALEELHRQGI 502

Query: 531 LATDDSFKFIW---------FQDHKSVIKAIY--TGSEFIESVVPGNEVGIVLASSSFYA 579
             TDDS K+ +         F   ++ +  +Y  TG+  + SV  G   G++L  ++FYA
Sbjct: 503 PTTDDSPKYNYTLHPNGDYEFGLCEARVLQLYSETGTA-VASVGAGQRCGLLLDRTNFYA 561

Query: 580 EQGGQIFDEGFI-----EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVD 634
           EQGGQ  D G++     + +   F V   Q+ GGF++H     E   R  VG++V   VD
Sbjct: 562 EQGGQASDRGYLVRTGQQDML--FPVAGAQLCGGFILHEAMAPE---RLQVGDQVQLYVD 616

Query: 635 YDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIE 694
              R      HT TH+L++ALR+ LG   +Q+GS + PE+LRFD +    +  E LR +E
Sbjct: 617 KAWRMGCMVKHTATHLLSWALRQTLGPTTEQRGSHLNPERLRFDVATQTLLTTEQLRTVE 676

Query: 695 SIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENK 754
           S V E +  +  VF +E  LA    I GLR+   EVYPDPVRVV++G  V   L  P ++
Sbjct: 677 SYVQEVVGQDKPVFMEEVPLAHTARIPGLRS-LDEVYPDPVRVVSVGVPVAHALG-PASQ 734

Query: 755 EWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKE 814
             +  S ELC GTHL +T       ++ E  + KGI R+ A+T   A +A E   SL +E
Sbjct: 735 AAMHTSVELCCGTHLLSTGAVGDLVIIGERQLVKGITRLLAITGEQAQQAREVGQSLSQE 794

Query: 815 VDDASKIEGSLLEKNQVRKAQKKVAE-ENLQKAVKVATETAEAA 857
           V+ AS+         ++ +  + + E   L K +   TE AE+A
Sbjct: 795 VEAASE---------RLSQGSRDLPEAHRLSKDIGRLTEVAESA 829


>gi|51260239|gb|AAH79844.1| Aars2 protein [Mus musculus]
          Length = 975

 Score =  660 bits (1704), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/824 (44%), Positives = 500/824 (60%), Gaps = 60/824 (7%)

Query: 63  VRDTFFKFFEDKN-HVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           VRD F  FF D++ H    S+ V P  DP+LLF NAGMNQ+KPIFLGT DP ++++   R
Sbjct: 32  VRDAFLSFFRDRHGHRLVPSATVRPRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRR 91

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFG-DYFKNEAIEWAWELLTKVYR 180
             N+QKC+RAGG+HNDL+DVG+D  HHTFFEMLGNW+FG +YFK EA   AWELLT+VY 
Sbjct: 92  VVNSQKCVRAGGRHNDLEDVGRDLSHHTFFEMLGNWAFGGEYFKEEACSMAWELLTQVYG 151

Query: 181 LPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +P DRL+ +YF GD + GL PD E RDIWL   +PASRVL FG ++NFWEMGDTGPCGPC
Sbjct: 152 IPEDRLWVSYFSGDSQTGLDPDLETRDIWLSLGVPASRVLSFGPQENFWEMGDTGPCGPC 211

Query: 240 SEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERL 299
           +EIHYD  G   +        P  +E+WN+VF+Q  RE+DGSL+ LP +HVDTG+G ERL
Sbjct: 212 TEIHYDLAGGVGS--------PQLVELWNLVFMQHYREADGSLQLLPQRHVDTGMGLERL 263

Query: 300 TSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSF 359
            ++LQ K S YDTD+F P+ DAI Q+ GA PYSG+VGA D  ++D AYRVVADHIRTLS 
Sbjct: 264 VAVLQGKRSTYDTDLFSPLLDAIHQSCGAPPYSGRVGAADEGRIDTAYRVVADHIRTLSV 323

Query: 360 AIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQR 419
            IADG  PG  G   VLRRILRRAVRY +EVL+A  GF   LV +VV+ +G  +PEL++ 
Sbjct: 324 CIADGVSPGMSGAPLVLRRILRRAVRYSTEVLQAPPGFLGSLVPVVVETLGSAYPELEKN 383

Query: 420 EAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAF---ILWD-----TYGF 471
              I  +++ +EA+F  +L +G     +       K L   D F   + W        G 
Sbjct: 384 SVKIASLVSEDEAAFLASLQRGRRIIDRTV-----KRLGPSDLFPAEVAWSLSLSGNLGI 438

Query: 472 PLDLTQLMAEERGLLVDIEGFNN-AMDEARERSRSAQNKQAGGAIVMDADATAALHKRGV 530
           PLDL +LM EE+G+ +D  G    A  EA+ R++ A+  Q    + +D  A   LH++G+
Sbjct: 439 PLDLVELMLEEKGVKLDTAGLEQLAQKEAQHRAQQAEADQE-DRLCLDVHALEELHRQGI 497

Query: 531 LATDDSFKFIW---------FQDHKSVIKAIY--TGSEFIESVVPGNEVGIVLASSSFYA 579
             TDDS K+ +         F   ++ +  +Y  TG+  + SV  G   G++L  ++FYA
Sbjct: 498 PTTDDSPKYNYTLHPNGDYEFGLCEARVLQLYSETGTA-VASVGAGQRCGLLLDRTNFYA 556

Query: 580 EQGGQIFDEGFI-----EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVD 634
           EQGGQ  D G++     + +   F V   Q+ GGF++H     E   R  VG++V   VD
Sbjct: 557 EQGGQASDRGYLVRTGQQDML--FPVAGAQLCGGFILHEAMAPE---RLQVGDQVQLYVD 611

Query: 635 YDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIE 694
              R      HT TH+L++ALR+ LG   +Q+GS + PE+LRFD +    +  E LR +E
Sbjct: 612 KAWRMGCMVKHTATHLLSWALRQTLGPTTEQRGSHLNPERLRFDVATQTLLTTEQLRTVE 671

Query: 695 SIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENK 754
           S V E +  +  VF +E  LA    I GLR+   EVYPDPVRVV++G  V   L  P ++
Sbjct: 672 SYVQEVVGQDKPVFMEEVPLAHTARIPGLRS-LDEVYPDPVRVVSVGVPVAHALG-PASQ 729

Query: 755 EWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKE 814
             +  S ELC GTHL +T       ++ E  + KGI R+ A+T   A +A E   SL +E
Sbjct: 730 AAMHTSVELCCGTHLLSTGAVGDLVIIGERQLVKGITRLLAITGEQAQQAREVGQSLSQE 789

Query: 815 VDDASKIEGSLLEKNQVRKAQKKVAE-ENLQKAVKVATETAEAA 857
           V+ AS+         ++ +  + + E   L K +   TE AE+A
Sbjct: 790 VEAASE---------RLSQGSRDLPEAHRLSKDIGRLTEVAESA 824


>gi|426251127|ref|XP_004019282.1| PREDICTED: LOW QUALITY PROTEIN: alanine--tRNA ligase, mitochondrial
           [Ovis aries]
          Length = 970

 Score =  659 bits (1699), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 359/770 (46%), Positives = 480/770 (62%), Gaps = 42/770 (5%)

Query: 60  ATKVRDTFFKFFEDKN-HVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSK 118
           A  VRD F  FF D++ H    S+ V P  DP+LLF NAGMNQ+KPIFLGT DP ++++ 
Sbjct: 36  AAAVRDAFLNFFRDRHGHRLVPSASVRPRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAG 95

Query: 119 LTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFG-DYFKNEAIEWAWELLTK 177
             R  N+QKC+RAGG+H+DL+DVG+D  HHTFFEMLGNW+FG +YFK EA   AWELLT+
Sbjct: 96  FRRVANSQKCVRAGGRHSDLEDVGRDLSHHTFFEMLGNWAFGGEYFKEEACSMAWELLTQ 155

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPC 236
           VY +P DRL+ +YFGGD KAGL PD E+RD+WL   +PASRVL FG ++NFWEMGDTGPC
Sbjct: 156 VYGIPEDRLWVSYFGGDPKAGLGPDLESRDVWLNLGVPASRVLSFGPEENFWEMGDTGPC 215

Query: 237 GPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGF 296
           GPC+EIHYD  G   A        P  +E+WN+VF+Q NRE+DGSL+PLP +HVDTG+G 
Sbjct: 216 GPCTEIHYDLAGGAGA--------PQLVELWNLVFMQHNREADGSLQPLPQRHVDTGMGL 267

Query: 297 ERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRT 356
           ERL ++LQ ++S YDTD+F P+ DAI Q  GA PYSG+VGA D  ++D AYRVVADHIRT
Sbjct: 268 ERLVAVLQGRLSTYDTDLFSPLLDAIHQGCGAPPYSGRVGAADEGRIDTAYRVVADHIRT 327

Query: 357 LSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPEL 416
           LS  IADG  PG  G   VLRRILRRAVR+ +EVL+A  GF   LV +VV+ +GD +PEL
Sbjct: 328 LSVCIADGVSPGMSGAPLVLRRILRRAVRFSTEVLQAPSGFLGSLVPVVVETLGDAYPEL 387

Query: 417 KQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLT 476
           ++  A +  + +  +   G+ +++   K    +     +V     +  L    G PLDL 
Sbjct: 388 RRSSAQV--LDSDSQPGVGRRVIERTLKRLGPSDVFPAEVAW---SLSLSGNLGLPLDLV 442

Query: 477 QLMAEERGLLVDIEGFNN-AMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDD 535
           +LM EE+G+ +D  G    A +EA+ R+  A+  Q  G + ++  A   L +RGV  TDD
Sbjct: 443 ELMLEEKGVQLDTAGLERLAPEEAQHRALQAEPVQEQG-LRLNVHALGELQRRGVPPTDD 501

Query: 536 SFKFIW---------FQDHKSVIKAIYT-GSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
           S K+ +         F   ++ +  +YT     + SV  G   G++L  ++FYAEQGGQ 
Sbjct: 502 SPKYSYSLRPGGGYEFSTCEAQVLQLYTEDGTAVASVGDGQRCGLLLDKTNFYAEQGGQA 561

Query: 586 FDEGFIEGLFGS----FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLI 641
            D G++  L G     F V   Q+ GGF++H  +  E      VG++V   VD   R+  
Sbjct: 562 SDRGYLV-LVGQQDVLFPVARAQVCGGFILHEVAAPE---XLRVGDQVQLHVDERFRE-- 615

Query: 642 APNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQI 701
              HT  H+LN+ALRE LG   +Q+GS + PE+LRFD +   P+ PE LR +E  V + +
Sbjct: 616 --KHTTIHLLNWALREALGPGTEQRGSHLNPERLRFDVATQAPLTPEQLRAVEVTVQKAV 673

Query: 702 KAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISA 761
             +  V+ +E  LA    + GLR+   EVYPDPVRVV++G  V   L DP ++  L  S 
Sbjct: 674 GRDEAVYMEEVALARTAHVPGLRS-LDEVYPDPVRVVSVGVPVAHAL-DPASRAALHTSV 731

Query: 762 ELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSL 811
           ELC GTHL  T       ++ E  + KGI R+ AVT   A +A E   SL
Sbjct: 732 ELCCGTHLLRTGAIGDLVIIGEFQLVKGITRLLAVTGEQAQQAREVGQSL 781


>gi|354479027|ref|XP_003501715.1| PREDICTED: LOW QUALITY PROTEIN: alanyl-tRNA synthetase,
           mitochondrial-like [Cricetulus griseus]
          Length = 980

 Score =  659 bits (1699), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/810 (45%), Positives = 490/810 (60%), Gaps = 48/810 (5%)

Query: 60  ATKVRDTFFKFFEDKN-HVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSK 118
           A  VRDTF  FF D++ H    S+ V P  D +LLF NAGMNQ+KPIFLGT DP ++++ 
Sbjct: 34  AAAVRDTFLSFFRDRHGHQLVPSASVRPRGDHSLLFVNAGMNQFKPIFLGTVDPRSEMAG 93

Query: 119 LTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFG-DYFKNEAIEWAWELLTK 177
             R  N+QKC+RAGG+HNDL+DVG+D  HHTFFEMLGNW+FG +YFK EA   AWELLT+
Sbjct: 94  FRRVANSQKCVRAGGRHNDLEDVGRDLSHHTFFEMLGNWAFGGEYFKEEACGMAWELLTQ 153

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPC 236
           VY +P DRL+ +YFGGD K GLAPD E RD+WL   +PASRVL FG ++NFWEMGDTGPC
Sbjct: 154 VYGIPEDRLWVSYFGGDTKTGLAPDLETRDVWLSLGVPASRVLSFGLQENFWEMGDTGPC 213

Query: 237 GPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGF 296
           GPC+EIHYD      A        P  +E+WN+VF+Q  RE+ GSL+PLP +HVDTG+G 
Sbjct: 214 GPCTEIHYDLAEGVGA--------PQLVELWNLVFMQHCREAGGSLQPLPQRHVDTGMGL 265

Query: 297 ERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRT 356
           ERL ++LQ + S YDTD+F P+  AI Q  G RPYSG+VG  D  ++D AYRVVADHIRT
Sbjct: 266 ERLVAVLQGRRSTYDTDLFSPLLSAIHQGCGVRPYSGRVGPADEGRIDTAYRVVADHIRT 325

Query: 357 LSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPEL 416
           LS  IADG  PG  G   +LRRILRRAVR+ +EVL+A  GF   LV +VV+ +G  +PEL
Sbjct: 326 LSVCIADGVFPGMSGAPLILRRILRRAVRFSTEVLRAPPGFLGSLVPVVVETLGAAYPEL 385

Query: 417 KQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAF---ILWD-----T 468
           ++  A I  +++ +EA+F  +L +G     +       K L   D F   + W       
Sbjct: 386 QKNSAQIASLVSEDEAAFLASLQRGRRIIDRTV-----KRLGPSDLFPAEVAWSLSLSGN 440

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNN-AMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
            G PLDL +LM EE+G+ +D  G    A  EA+ R++ A+     G + +D      LH+
Sbjct: 441 LGIPLDLVELMLEEKGVQLDTAGLEELAQKEAQHRAQQAEPVPEEG-LCLDVHTLEELHR 499

Query: 528 RGVLATDDSFKFIW---------FQDHKSVIKAIYT-GSEFIESVVPGNEVGIVLASSSF 577
            GV  TDDS K+ +         F   ++ +  +Y+     + SV  G   G++L  ++F
Sbjct: 500 HGVPPTDDSPKYNYSLQPNGDYEFGLCEAQVLQLYSEDGTAVASVGAGQRCGLLLDRTNF 559

Query: 578 YAEQGGQIFDEGFIEGLFGS---FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVD 634
           YAEQGGQ  D G++         F V   Q+ GGF++H    TE      VGE+V   VD
Sbjct: 560 YAEQGGQASDRGYLVRTGQQDVLFPVARAQVCGGFILHEAVATEC---LQVGEQVQLYVD 616

Query: 635 YDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIE 694
              R      HT TH+L++ALR+ LG   +Q+GS + PE+LRFD +   P+  E LR +E
Sbjct: 617 EAWRMGCMVKHTATHLLSWALRKTLGPTTEQRGSHLNPERLRFDVATQAPLTTEQLRTVE 676

Query: 695 SIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENK 754
           S V E ++ +  V+ +E  LA    + GLR+   EVYPDPVRVV++G  V   LA P+++
Sbjct: 677 SYVQEAVRQDKAVYMEEVPLAHTAHVPGLRS-LDEVYPDPVRVVSVGVPVAHALA-PDSQ 734

Query: 755 EWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKE 814
             L  S ELC GTHL  T       ++    + KGI R+ A+T   A +A E   SL +E
Sbjct: 735 AALQTSVELCCGTHLLRTGAMGDLVIIGGRQLVKGITRLLAITGEQAQQARELGQSLSQE 794

Query: 815 VDDA----SKIEGSLLEKNQVRKAQKKVAE 840
           V+ A    S+    L E +Q+ K   ++ E
Sbjct: 795 VEAARERLSRGSQDLQEAHQLSKDIGRLTE 824


>gi|223937386|ref|ZP_03629291.1| alanyl-tRNA synthetase [bacterium Ellin514]
 gi|223893937|gb|EEF60393.1| alanyl-tRNA synthetase [bacterium Ellin514]
          Length = 908

 Score =  658 bits (1697), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 406/942 (43%), Positives = 540/942 (57%), Gaps = 86/942 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL--- 116
           ++++R +F  FF+ K H    SS ++P + P LLF NAGMNQ+ PIFLG    +      
Sbjct: 3   SSQIRQSFLDFFKSKQHTIVPSSSLMP-DSPNLLFTNAGMNQFVPIFLGQKKADVSKWAG 61

Query: 117 ---SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWE 173
              S  TRA +TQKCIRAGGKHNDL+DVG DTYHHTFFEMLGNWSFGDYFK EAI+WAWE
Sbjct: 62  AVPSLDTRAADTQKCIRAGGKHNDLEDVGLDTYHHTFFEMLGNWSFGDYFKKEAIDWAWE 121

Query: 174 LLTKVYRLPADRLYATYFGGDEKAGLAP--DNEARDIW-LKFL-----PASRVLPFGCKD 225
           L+T+V+R P +RLYAT +  D+  G     D EA D+W  KF      P   ++    KD
Sbjct: 122 LVTEVWRFPKERLYATVYSPDKSLGDPSDFDQEAYDLWAAKFSAAGLDPKVHIVNGNKKD 181

Query: 226 NFWEMGDTGPCGPCSEIHYDRTGNRDA-ASLVNNDDPTCIEIWNIVFIQFNRESDGSLKP 284
           NFW MGDTGPCGPCSE+H D T   D   +LVN     CIEIWN+VFIQFN    G+  P
Sbjct: 182 NFWMMGDTGPCGPCSELHVDLTPQGDTKGALVNKGTAECIEIWNLVFIQFNANPGGTFSP 241

Query: 285 LPAKHVDTGLGFERLTSILQN----------KMSNYDTDVFMPIFDAIQQATGAR----- 329
           LPAKHVDTG+GFER+TSI+Q           K+SNY+TD+F PIFDAI++ +G R     
Sbjct: 242 LPAKHVDTGMGFERVTSIMQGSHGFKDFANAKISNYETDIFRPIFDAIEKLSGKRYGSTL 301

Query: 330 PYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSE 389
           P SG  G  + +KVD+A+RV+ADHIRTLSF+IADG  PGN  R YVLRRILRRAV+YG  
Sbjct: 302 PKSGSTGDTEQEKVDVAFRVIADHIRTLSFSIADGIQPGNTDRNYVLRRILRRAVKYG-R 360

Query: 390 VLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAA 449
            L   + FF  LV+++ + MG VFPE+++R+ H++++I +EE +F KTL +GIE F +  
Sbjct: 361 TLGFHEPFFYKLVDVLAETMGQVFPEIRERKQHVKDVIRSEEEAFNKTLDRGIELFNQEI 420

Query: 450 QDVQ-GKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQN 508
             V+ G  L G  AF L+DTYGFPLDLT+LMA ERGL VD+ GFN  MDE ++RS++AQ 
Sbjct: 421 AHVKPGHQLQGPFAFKLYDTYGFPLDLTELMARERGLAVDVAGFNLLMDEQKKRSQAAQK 480

Query: 509 KQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEV 568
           K+             +L +   + T    KFI F   ++  K        +E V   ++ 
Sbjct: 481 KE-----------VISLSQ---IETTVPTKFIGFDQLQAKTKV-------LEVVGLKDKT 519

Query: 569 GIVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEE 628
            +VL +SS YAE GGQ+ D G +      + V N Q  G   +H   L +G      G E
Sbjct: 520 AVVLDTSSAYAEMGGQVGDTGELSQGGKLWRVENTQKSGNTWLHF--LADGDAP-QTGSE 576

Query: 629 VICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPE 688
           V   VD +RR  I  +HT TH+L++A+ EV+     QKGS V P+KL FDF + +P+ P+
Sbjct: 577 VELTVDRERRNAIQRHHTVTHILHWAIHEVVSREASQKGSFVGPDKLTFDF-NSQPLTPQ 635

Query: 689 HLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLL 748
            +  +E +VNE+I     V   E   A+ K    +   FG+ Y D VRVV IG K  +L 
Sbjct: 636 QVADVEKLVNERILENAGVSWTEVLHADVKGRKDVMQFFGDKYGDRVRVVQIGGKAGELN 695

Query: 749 ADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAA 808
                      S ELCGGTH   T E   F ++ E  +A G+RRI AV    AY      
Sbjct: 696 G---------YSMELCGGTHTQGTGEIGLFRIIGESAVAAGVRRIEAVAGLEAYGKATDE 746

Query: 809 CSLEKEVDDASKIE---GSLLEKNQVRKAQKKVAEENLQKAV--KVATETA-----EAAA 858
             L K +  A K+    G L +K     AQ+K  E  L KAV  K A  TA     +AA 
Sbjct: 747 IQLIKSI--AGKVNAPIGELEKKIDALLAQQKELERQL-KAVNQKEAANTAKSLIGKAAT 803

Query: 859 SNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQS 918
            NG P  I    +G       +++   ++ +   V+V         A+V +  PE + + 
Sbjct: 804 LNGIPAIIEN--LGSADGDTLQSIADALKGQFKGVVVLGGAANGAVALVASVSPEFTAKV 861

Query: 919 KQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAM 960
           +  ++ +     + P+ G  G GK   A G G D +++  AM
Sbjct: 862 QAGKIIQ----GIAPIVGGKGGGKPDNARGGGKDVSKLDEAM 899


>gi|395832444|ref|XP_003789281.1| PREDICTED: alanine--tRNA ligase, mitochondrial [Otolemur garnettii]
          Length = 985

 Score =  655 bits (1690), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/786 (45%), Positives = 486/786 (61%), Gaps = 44/786 (5%)

Query: 60  ATKVRDTFFKFFEDKN-HVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSK 118
           A+ VRD F  FF D++ H    S+ V P  DPTLLF NAGMNQ+KPIFLGT DP ++++ 
Sbjct: 39  ASAVRDAFLSFFRDRHGHRLVPSASVRPRGDPTLLFVNAGMNQFKPIFLGTVDPRSEMAG 98

Query: 119 LTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFG-DYFKNEAIEWAWELLTK 177
             R  N+QKC+RAGG+H+DL+DVG+D  HHTFFEMLGNW+FG +YFK EA   AWELLT+
Sbjct: 99  FRRVANSQKCVRAGGRHSDLEDVGRDLSHHTFFEMLGNWAFGGEYFKEEACSMAWELLTQ 158

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPC 236
           VY +P +RL+ TYFGGD K G+ PD E+RDIWL   +PA+RVL FG ++NFWEMG+TGPC
Sbjct: 159 VYGIPEERLWVTYFGGDPKTGMQPDLESRDIWLSLGVPANRVLSFGPQENFWEMGETGPC 218

Query: 237 GPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGF 296
           GPC+EIHYD  G   A        P  +E+WN+VF+Q NRE++GSL+PLP +HVDTG+G 
Sbjct: 219 GPCTEIHYDLAGGVGA--------PQLVELWNLVFMQHNRETNGSLQPLPQQHVDTGMGL 270

Query: 297 ERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRT 356
           ERL ++LQ K S YDTD+F P+  AI Q   A PY G+VG  D  + DMAYRVVADHIRT
Sbjct: 271 ERLVAVLQGKHSTYDTDLFSPLLHAIYQGCEAPPYLGRVGVADEARTDMAYRVVADHIRT 330

Query: 357 LSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPEL 416
           LS  IADG  PG  G   VLRRILRRAVR+ +EVL+A  GF   LV +VV+ +GD +PEL
Sbjct: 331 LSVCIADGVSPGMSGAPLVLRRILRRAVRFSTEVLQAPPGFLGSLVPVVVETLGDAYPEL 390

Query: 417 KQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAF---ILWD-----T 468
           ++  A I ++++ +E +F  +L +G +   +  +      L   D F   + W       
Sbjct: 391 QKNSAQIAKLVSEDEEAFLASLQRGRQIIDRTVRQ-----LGPSDVFPAEVAWSLSLSGN 445

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNN-AMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
            G PLDL +LM EE+G+ +D  G    A +EA+ R++ A+  Q  G + ++  A   L +
Sbjct: 446 LGLPLDLVELMLEEKGVQLDSAGLERLAQEEAQHRAQQAEPIQDQG-LRLNIHALGDLQR 504

Query: 528 RGVLATDDSFKFIW---------FQDHKSVIKAIYT-GSEFIESVVPGNEVGIVLASSSF 577
           RGV  TDDS K+ +         F   ++ +  +YT     + SV  G   G++L  ++F
Sbjct: 505 RGVPPTDDSPKYNYSLRPNGDYEFHTCEAQVLQLYTEDGTAVASVGKGQHCGLLLDRTNF 564

Query: 578 YAEQGGQIFDEGFI--EGLFGSFY-VRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVD 634
           YAEQGGQ  D G++  EG     + V   Q+ GGF++H     E      VG++V   VD
Sbjct: 565 YAEQGGQASDRGYLVREGQQDVLFPVTRAQVCGGFILHEVIAPEC---LQVGDQVQLHVD 621

Query: 635 YDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIE 694
              R      HT TH+L++AL++ LG   +Q+GS + PE+LRFD +   P+  E LR +E
Sbjct: 622 KAWRLGCMEKHTATHLLSWALQQALGPGTEQRGSHLNPERLRFDVATQAPLTSEQLRAVE 681

Query: 695 SIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENK 754
             V E +  +  V+ +E  LA    + GLR+   EVYPDPVRVV++G  V   L DP ++
Sbjct: 682 RTVQEVVGQDEAVYMEEVALALTAQVPGLRS-LDEVYPDPVRVVSVGVPVAQAL-DPASQ 739

Query: 755 EWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKE 814
             L  S ELC GTHL  T       +  E  ++KG  R+ AVT   A +A E   SL +E
Sbjct: 740 AALQTSVELCCGTHLLRTGAVRDLVITGERQLSKGTTRLLAVTGEQAQQARELGQSLAQE 799

Query: 815 VDDASK 820
           V+ A++
Sbjct: 800 VEAAAE 805


>gi|148691494|gb|EDL23441.1| alanyl-tRNA synthetase like [Mus musculus]
          Length = 984

 Score =  655 bits (1689), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/828 (44%), Positives = 500/828 (60%), Gaps = 64/828 (7%)

Query: 63  VRDTFFKFFEDKN-HVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           VRD F  FF D++ H    S+ V P  DP+LLF NAGMNQ+KPIFLGT DP ++++   R
Sbjct: 37  VRDAFLSFFRDRHGHRLVPSATVRPRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRR 96

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFG-DYFKNEAIEWAWELLTKVYR 180
             N+QKC+RAGG+HNDL+DVG+D  HHTFFEMLGNW+FG +YFK EA   AWELLT+VY 
Sbjct: 97  VVNSQKCVRAGGRHNDLEDVGRDLSHHTFFEMLGNWAFGGEYFKEEACSMAWELLTQVYG 156

Query: 181 LPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +P DRL+ +YF GD + GL PD E RDIWL   +PASRVL FG ++NFWEMGDTGPCGPC
Sbjct: 157 IPEDRLWVSYFSGDSQTGLDPDLETRDIWLSLGVPASRVLSFGPQENFWEMGDTGPCGPC 216

Query: 240 SEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERL 299
           +EIHYD  G   +        P  +E+WN+VF+Q  RE+DGSL+ LP +HVDTG+G ERL
Sbjct: 217 TEIHYDLAGGVGS--------PQLVELWNLVFMQHYREADGSLQLLPQRHVDTGMGLERL 268

Query: 300 TSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSF 359
            ++LQ K S YDTD+F P+ DAI Q+ GA PYSG+VGA D  ++D AYRVVADHIRTLS 
Sbjct: 269 VAVLQGKRSTYDTDLFSPLLDAIHQSCGAPPYSGRVGAADEGRIDTAYRVVADHIRTLSV 328

Query: 360 AIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQR 419
            IADG  PG  G   VLRRILRRAVRY +EVL+A  GF   LV +VV+ +G  +PEL++ 
Sbjct: 329 CIADGVSPGMSGAPLVLRRILRRAVRYSTEVLQAPPGFLGSLVPVVVETLGSAYPELEKN 388

Query: 420 EA----HIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAF---ILWD----- 467
                  I  +++ +EA+F  +L +G     +       K L   D F   + W      
Sbjct: 389 SVKVLIEIASLVSEDEAAFLASLQRGRRIIDRTV-----KRLGPSDLFPAEVAWSLSLSG 443

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNN-AMDEARERSRSAQNKQAGGAIVMDADATAALH 526
             G PLDL +LM EE+G+ +D  G    A  EA+ R++ A+  Q    + +D  A   LH
Sbjct: 444 NLGIPLDLVELMLEEKGVKLDTAGLEQLAQKEAQHRAQQAEADQE-DRLCLDVHALEELH 502

Query: 527 KRGVLATDDSFKFIW---------FQDHKSVIKAIY--TGSEFIESVVPGNEVGIVLASS 575
           ++G+  TDDS K+ +         F   ++ +  +Y  TG+  + SV  G   G++L  +
Sbjct: 503 RQGIPTTDDSPKYNYTLHPNGDYEFGLCEARVLQLYSETGTA-VASVGAGQRCGLLLDRT 561

Query: 576 SFYAEQGGQIFDEGFI-----EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVI 630
           +FYAEQGGQ  D G++     + +   F V   Q+ GGF++H     E   R  VG++V 
Sbjct: 562 NFYAEQGGQASDRGYLVRTGQQDML--FPVAGAQLCGGFILHEAMAPE---RLQVGDQVQ 616

Query: 631 CKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHL 690
             VD   R      HT TH+L++ALR+ LG   +Q+GS + PE+LRFD +    +  E L
Sbjct: 617 LYVDKAWRMGCMVKHTATHLLSWALRQTLGPTTEQRGSHLNPERLRFDVATQTLLTTEQL 676

Query: 691 RRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLAD 750
           R +ES V E +  +  VF +E  LA    I GLR+   EVYPDPVRVV++G  V   L  
Sbjct: 677 RTVESYVQEVVGQDKPVFMEEVPLAHTARIPGLRS-LDEVYPDPVRVVSVGVPVAHALG- 734

Query: 751 PENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACS 810
           P ++  +  S ELC GTHL +T       ++ E  + KGI R+ A+T   A +A E   S
Sbjct: 735 PASQAAMHTSVELCCGTHLLSTGAVGDLVIIGERQLVKGITRLLAITGEQAQQAREVGQS 794

Query: 811 LEKEVDDASKIEGSLLEKNQVRKAQKKVAE-ENLQKAVKVATETAEAA 857
           L +EV+ AS+         ++ +  + + E   L K +   TE AE+A
Sbjct: 795 LSQEVEAASE---------RLSQGSRDLPEAHRLSKDIGRLTEVAESA 833


>gi|426353353|ref|XP_004044161.1| PREDICTED: alanine--tRNA ligase, mitochondrial [Gorilla gorilla
           gorilla]
          Length = 985

 Score =  654 bits (1688), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 359/781 (45%), Positives = 479/781 (61%), Gaps = 48/781 (6%)

Query: 67  FFKFFEDKN-HVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRACNT 125
           F  FF D++ H    S+ V P  DP+LLF NAGMNQ+KPIFLGT DP ++++   R  N+
Sbjct: 46  FLNFFRDRHGHRLVPSASVRPRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRRVANS 105

Query: 126 QKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFG-DYFKNEAIEWAWELLTKVYRLPAD 184
           QKC+RAGG HNDL+DVG+D  HHTFFEMLGNW+FG +YFK EA   AWELLT+VY +P +
Sbjct: 106 QKCVRAGGHHNDLEDVGRDLSHHTFFEMLGNWAFGGEYFKEEACNMAWELLTQVYGIPEE 165

Query: 185 RLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGPCSEIH 243
           RL+ +YF GD KAGL PD E RDIWL   +PASRVL FG ++NFWEMGDTGPCGPC+EIH
Sbjct: 166 RLWVSYFDGDPKAGLDPDLETRDIWLSLGVPASRVLSFGPQENFWEMGDTGPCGPCTEIH 225

Query: 244 YDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSIL 303
           YD  G   A        P  IE+WN+VF+Q NRE+DGSL+PLP +HVDTG+G ERL ++L
Sbjct: 226 YDLAGGVGA--------PQLIELWNLVFMQHNRETDGSLQPLPQRHVDTGMGLERLVAVL 277

Query: 304 QNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIAD 363
           Q K S YDTD+F P+ +AIQQ   A PY G+VG  D  + D AYRVVADHIRTLS  I+D
Sbjct: 278 QGKHSTYDTDLFSPLLNAIQQGCRAPPYLGRVGVADEGRTDTAYRVVADHIRTLSVCISD 337

Query: 364 GSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHI 423
           G  PG  G   VLRRILRRAVR+  E+LKA  GF   LV IVV+ +GD +PEL++  A I
Sbjct: 338 GVFPGMSGPPLVLRRILRRAVRFSMEILKAPPGFLGSLVPIVVETLGDAYPELQRNSAQI 397

Query: 424 REIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAF---ILWDT-----YGFPLDL 475
             +++ +EA+F  +L +G     +       + L   D F   + W        G PLD+
Sbjct: 398 ANLVSEDEAAFLASLERGRRIIDRTL-----RTLGPSDMFPAEVAWSLSLCGDLGLPLDM 452

Query: 476 TQLMAEERGLLVDIEGFNN-AMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATD 534
            +LM EE+G+ +D  G    A +EA+ R+R A+  Q  G + +D  A   L ++GV  TD
Sbjct: 453 VELMLEEKGVQLDSAGLERLAQEEAQHRARQAEPVQKQG-LWLDVHALGELQRQGVPPTD 511

Query: 535 DSFKFIW---------FQDHKSVIKAIYT-GSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
           DS K+ +         F   ++ +  +YT     + SV  G   G++L  ++FYAEQGGQ
Sbjct: 512 DSPKYNYSLRPSGSYEFGTCEAQVLQLYTEDGTAVASVGKGQRCGLLLDRTNFYAEQGGQ 571

Query: 585 IFDEGFI-----EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRK 639
             D G++     E +   F V   Q+ GGF++H     E      +G++V   VD   R 
Sbjct: 572 ASDRGYLVRAGQEDVL--FPVARAQVCGGFILHEAVAPEC---LQIGDQVQLHVDETWRL 626

Query: 640 LIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNE 699
                HT TH+LN+ALR+ LG   +Q+GS + PE+LR D +   P+ PE LR +E+ V E
Sbjct: 627 GCMAKHTATHLLNWALRQTLGPGTEQQGSHLNPEQLRLDVTTQTPLTPEQLRAVENTVQE 686

Query: 700 QIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSI 759
            +  +  V+ +E  LA    + GLR+   EVYPDPVRVV++G  V   L DP ++  L  
Sbjct: 687 AVGQDEAVYMEEVPLALTAQVPGLRS-LDEVYPDPVRVVSVGVPVAHAL-DPASQAALQT 744

Query: 760 SAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDAS 819
           S ELC GTHL  T       ++ +  ++KG  R+ AVT   A +A E   SL +EV  A+
Sbjct: 745 SVELCCGTHLLRTGAVGDLVIIGDRQLSKGTTRLLAVTGEQAQQARELGQSLAQEVKAAT 804

Query: 820 K 820
           +
Sbjct: 805 E 805


>gi|189499310|ref|YP_001958780.1| alanyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
 gi|189494751|gb|ACE03299.1| alanyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
          Length = 886

 Score =  654 bits (1687), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/758 (46%), Positives = 476/758 (62%), Gaps = 75/758 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           ++ +R +F  +FE K H   +S+PV+P  DPTLLF NAGMNQ+K +FL   D  ++    
Sbjct: 3   SSDIRQSFLDYFEKKEHTIVRSAPVIPAEDPTLLFTNAGMNQFKDVFL---DKGSR--PY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA +TQKCIRA GKHNDL+DVG+DTYHHTFFEMLGNWSFGDY+K EAI WAWELLT+V+
Sbjct: 58  SRAADTQKCIRASGKHNDLEDVGRDTYHHTFFEMLGNWSFGDYYKKEAIAWAWELLTEVW 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF--LPASRVLPFGCKDNFWEMGDTGPCG 237
            LP +RLYAT +          D+E+ +IW     +    ++ FG KDNFWEMG+TGPCG
Sbjct: 118 SLPKERLYATVY--------QDDDESLEIWKTATDIDPDHIMKFGDKDNFWEMGETGPCG 169

Query: 238 PCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFE 297
           PCSEIH D T +     LVN DD   IE+WN+VFIQ+NR++D SL+PLP KHVDTG+GFE
Sbjct: 170 PCSEIHIDLTDDLSGRELVNADDHRVIELWNLVFIQYNRKADRSLEPLPKKHVDTGMGFE 229

Query: 298 RLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTL 357
           R+T++LQ+K SNYDTD+F P+FDAI   TG   Y+  +   D ++ DMA RV+ADH RTL
Sbjct: 230 RITAVLQSKGSNYDTDIFAPLFDAITAHTGV-AYTATL---DGER-DMAMRVIADHARTL 284

Query: 358 SFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELK 417
           +FAI DG+ PGNEGR YVLRRILRRAVRY  ++   Q   +  LV ++   MG VFPELK
Sbjct: 285 TFAITDGAVPGNEGRGYVLRRILRRAVRYARKLDCNQPVLYR-LVGVIADTMGAVFPELK 343

Query: 418 QREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG---KVLSGQDAFILWDTYGFPLD 474
           +++A + +I+ +EE SF  TL +GIE F + A  ++    K +SG+DAF L+DTYGFPLD
Sbjct: 344 KQQATVEKIVKSEEESFLVTLGRGIEIFGEIAAALKASKEKSISGEDAFRLYDTYGFPLD 403

Query: 475 LTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATD 534
           LT+LMA E GL VD +GF   M E +ER+R  + ++                      T 
Sbjct: 404 LTRLMASEEGLGVDEKGFGACMKEQKERARKDRKQKQ-------------------QITG 444

Query: 535 DSFKFIWFQDHKSVI----KAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGF 590
           D  ++ WF+     +    + + T ++ I   + G+++ +VL  + FYAE GGQ  D G 
Sbjct: 445 DEGQWQWFEQKGPTVFLGYETLETEAQIIGVRIAGSQMQLVLDQTPFYAESGGQTGDRGR 504

Query: 591 IEGLFGSFYVRNVQIYGGFVIHI----------GSLTEGAGRFSVGEEVICKVDYDRRKL 640
           IEG    F V + +  G  ++H+          G +T  +  FS   +V  +VD + R+ 
Sbjct: 505 IEGENYIFDVIDTRKDGDVIVHVAGTVYDRATGGEVTPESIAFSQAVQVQAQVDKETREA 564

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
              NHT TH+L+ ALR+VLG+HV QKGS+V P++LRFDFSH + V    L  +E+ VNE+
Sbjct: 565 TERNHTATHLLHAALRKVLGEHVQQKGSLVGPDRLRFDFSHFEKVSAGELEAVEAEVNER 624

Query: 701 IKAELDVFSKEATLA-EAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSI 759
           I+ E     K A +  EA    G  A FG+ Y D VRVV +                  +
Sbjct: 625 IR-EAGALVKHADIPYEAALEKGALAFFGDKYADRVRVVEVP----------------GV 667

Query: 760 SAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVT 797
           S ELCGGTH+SN  +   F ++SE  IA GIRRI A++
Sbjct: 668 SMELCGGTHVSNVGQIGLFKIMSESSIASGIRRIEAMS 705


>gi|403261407|ref|XP_003923114.1| PREDICTED: alanine--tRNA ligase, mitochondrial [Saimiri boliviensis
           boliviensis]
          Length = 985

 Score =  653 bits (1684), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/782 (45%), Positives = 479/782 (61%), Gaps = 48/782 (6%)

Query: 66  TFFKFFEDKN-HVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRACN 124
           TF  FF D++ H    S+ V P  DP+L F NAGMNQ+KPIFLGT DP ++++   R  N
Sbjct: 45  TFLTFFRDRHGHRLVPSASVRPRGDPSLFFVNAGMNQFKPIFLGTVDPRSEMAGFRRVAN 104

Query: 125 TQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFG-DYFKNEAIEWAWELLTKVYRLPA 183
           +QKC+RAGG HNDL+DVG+D  HHTFFEMLG+W+FG +YFK EA   AWELLT+VY +P 
Sbjct: 105 SQKCVRAGGHHNDLEDVGRDLSHHTFFEMLGSWAFGGEYFKEEACSMAWELLTQVYGIPE 164

Query: 184 DRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGPCSEI 242
           +RL+ +YF GD K GL PD E RDIWL   +PASRVL FG ++NFWEMGDTGPCGPC+EI
Sbjct: 165 ERLWVSYFDGDPKTGLDPDLETRDIWLSLGVPASRVLSFGPQENFWEMGDTGPCGPCAEI 224

Query: 243 HYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSI 302
           HYD  G   A        P  +E+WN+VF+Q NRE+DGSL+PLP +HVDTG+G ERL ++
Sbjct: 225 HYDLAGGVGA--------PQLVELWNLVFMQHNREADGSLQPLPQRHVDTGMGLERLVAV 276

Query: 303 LQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIA 362
           LQ K S YDTD+F P+  AI Q   A PY G+VG  D  + D AYRVVADHIRTLS  IA
Sbjct: 277 LQGKHSTYDTDLFSPLLSAIHQGCRAPPYLGRVGVADEGRTDTAYRVVADHIRTLSICIA 336

Query: 363 DGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAH 422
           DG  PG  G   VLR+ILRRAVR+ +E+LKA  GF   LV +VV+ +GD +PEL+++ A 
Sbjct: 337 DGVFPGMSGAPLVLRQILRRAVRFSTEILKAPPGFLGSLVPVVVETLGDAYPELQRKSAQ 396

Query: 423 IREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAF---ILWDT-----YGFPLD 474
           I  +++ +EA+F  +L +G     +       + L   D F   + W        G PLD
Sbjct: 397 IVNLVSEDEAAFLASLERGRRIIDRTL-----RSLGPSDMFPAEVAWSLSLAGDLGLPLD 451

Query: 475 LTQLMAEERGLLVDIEGFNN-AMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLAT 533
           L +LM EE+G+ +D  G    A +EA+ R++ A+  Q    + +D  A   L  RGV  T
Sbjct: 452 LVELMLEEKGVQLDSAGLERLAREEAQHRAQQAEPVQK-QVLWLDVHALGELQCRGVPPT 510

Query: 534 DDSFKFIW---------FQDHKSVIKAIYT-GSEFIESVVPGNEVGIVLASSSFYAEQGG 583
           DDS K+ +         F   ++ +  +YT     + SV  G   G++L  ++FYAEQGG
Sbjct: 511 DDSPKYDYSLQPNGGYEFGTCEAQVLQLYTEDGTAVASVGKGQRCGLLLDKTNFYAEQGG 570

Query: 584 QIFDEGFI-----EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRR 638
           Q  D G++     E +   F +   Q+ GGF++H     E   R  +G++V   VD   R
Sbjct: 571 QASDRGYLVRAGQEDVL--FPIARAQVCGGFILHEAVAPE---RLQIGDQVQLHVDKAWR 625

Query: 639 KLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVN 698
                 HT TH+LN+ALR+ LG   +Q+GS + PE+LRFD +   P+ PE LR +E+ V 
Sbjct: 626 LGCMEKHTATHLLNWALRQTLGPGTEQQGSHLNPEQLRFDVATQTPLTPEQLRAVENTVQ 685

Query: 699 EQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLS 758
           E ++ +  V+ +E  LA    + GLR+   EVYPDPVRVV++G  V   L DP ++  L 
Sbjct: 686 EAVRQDKAVYMEEVALALTAQVPGLRS-LDEVYPDPVRVVSVGVPVAHAL-DPASQAALQ 743

Query: 759 ISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDA 818
            S ELC GTHL  T       ++ E  ++KG  R+ AVT   A KA E   SL +EV  A
Sbjct: 744 TSVELCCGTHLLRTGAVGDLVIIGERQLSKGTTRLLAVTGEQAQKARELGQSLAQEVKAA 803

Query: 819 SK 820
           ++
Sbjct: 804 TE 805


>gi|397526721|ref|XP_003833266.1| PREDICTED: alanine--tRNA ligase, mitochondrial [Pan paniscus]
          Length = 985

 Score =  652 bits (1682), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/781 (45%), Positives = 479/781 (61%), Gaps = 48/781 (6%)

Query: 67  FFKFFEDKN-HVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRACNT 125
           F  FF D++ H    S+ V P  DP+LLF NAGMNQ+KPIFLGT DP ++++   R  N+
Sbjct: 46  FLNFFRDRHGHRLVPSASVRPRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRRVANS 105

Query: 126 QKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFG-DYFKNEAIEWAWELLTKVYRLPAD 184
           QKC+RAGG HNDL+DVG+D  HHTFFEMLGNW+FG +YFK EA   AWELLT+VY +P +
Sbjct: 106 QKCVRAGGHHNDLEDVGRDLSHHTFFEMLGNWAFGGEYFKEEACNMAWELLTQVYGIPEE 165

Query: 185 RLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGPCSEIH 243
           RL+ +YF GD KAGL PD E RDIWL   +PASRVL FG +DNFWEMGDTGPCGPC+EIH
Sbjct: 166 RLWISYFDGDPKAGLDPDLETRDIWLSLGVPASRVLSFGPQDNFWEMGDTGPCGPCTEIH 225

Query: 244 YDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSIL 303
           YD  G   A        P  +E+WN+VF+Q NRE+DGSL+PLP +HVDTG+G ERL ++L
Sbjct: 226 YDLAGGVGA--------PQLVELWNLVFMQHNREADGSLQPLPQRHVDTGMGLERLVAVL 277

Query: 304 QNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIAD 363
           Q K S YDTD+F P+ +AIQQ   A PY G+VG  D  + D AYRVVADHIRTLS  I+D
Sbjct: 278 QGKHSTYDTDLFSPLLNAIQQGCRAPPYLGRVGVADEGRTDTAYRVVADHIRTLSVCISD 337

Query: 364 GSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHI 423
           G  PG  G   VLRRILRRAVR+  E+LKA  GF   LV +VV+ +GD +PEL++  A I
Sbjct: 338 GIFPGMSGPPLVLRRILRRAVRFSMEILKAPPGFLGSLVPVVVETLGDAYPELQRNSAQI 397

Query: 424 REIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAF---ILWDT-----YGFPLDL 475
             +++ +EA+F  +L +G     +       + L   D F   + W        G PLD+
Sbjct: 398 ANLVSEDEAAFLASLERGRRIIDRTL-----RTLGPSDMFPAEVAWSLSLCGDLGLPLDM 452

Query: 476 TQLMAEERGLLVDIEGFNN-AMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATD 534
            +LM EE+G+ +D  G    A +EA+ R+R A+  Q  G + +D  A   L ++GV  TD
Sbjct: 453 VELMLEEKGVQLDSAGLERLAQEEAQHRARQAEPVQKQG-LWLDVHALGELQRQGVPPTD 511

Query: 535 DSFKFIW---------FQDHKSVIKAIYT-GSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
           DS K+ +         F   ++ +  +YT     + SV  G   G++L  ++FYAEQGGQ
Sbjct: 512 DSPKYNYSLRPSGSYEFGTCEAQVLQLYTEDGTAVASVGKGQRCGLLLDRTNFYAEQGGQ 571

Query: 585 IFDEGFI-----EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRK 639
             D G++     E +   F V   Q+ GGF++H     E      +G++V   VD   R 
Sbjct: 572 ASDRGYLVRAGQEDVL--FPVARAQVCGGFILHEAVAPEC---LRLGDQVQLHVDEAWRL 626

Query: 640 LIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNE 699
                HT TH+LN+ALR+ LG   +Q+GS + PE+LR D +   P+ PE LR +E+ V E
Sbjct: 627 GCMAKHTATHLLNWALRQTLGPGTEQQGSHLNPEQLRLDVTTQTPLTPEQLRAVENTVQE 686

Query: 700 QIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSI 759
            +  +  V+ +E  LA    + GLR+   EVYPDPVRVV++G  V   L DP ++  L  
Sbjct: 687 AVGQDEAVYMEEVPLALTAQVPGLRS-LDEVYPDPVRVVSVGVPVAHAL-DPASQAALQT 744

Query: 760 SAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDAS 819
           S ELC GTHL  T       ++ +  ++KG  R+ A+T   A +A E   SL +EV  A+
Sbjct: 745 SVELCCGTHLLRTGAVGDLVIIGDRQLSKGTTRLLAITGEQAQQARELGQSLAQEVKAAT 804

Query: 820 K 820
           +
Sbjct: 805 E 805


>gi|297678244|ref|XP_002816983.1| PREDICTED: alanine--tRNA ligase, mitochondrial [Pongo abelii]
          Length = 985

 Score =  651 bits (1680), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/781 (45%), Positives = 479/781 (61%), Gaps = 48/781 (6%)

Query: 67  FFKFFEDKN-HVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRACNT 125
           F  FF D++ H    S+ V P  DP+LLF NAGMNQ+KPIFLGT DP ++++   R  N+
Sbjct: 46  FLNFFRDRHGHRLVPSASVRPRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRRVANS 105

Query: 126 QKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFG-DYFKNEAIEWAWELLTKVYRLPAD 184
           QKC+RAGG HNDL+DVG+D  HHTFFEMLGNW+FG +YFK EA   AWELLT+VY +P +
Sbjct: 106 QKCVRAGGHHNDLEDVGQDLSHHTFFEMLGNWAFGGEYFKEEACNMAWELLTQVYGIPEE 165

Query: 185 RLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGPCSEIH 243
           RL+ +YF GD KAGL PD E RDIWL   +PASRVL FG ++NFWEMGDTGPCGPC+EIH
Sbjct: 166 RLWVSYFDGDPKAGLDPDLETRDIWLSLGVPASRVLSFGPQENFWEMGDTGPCGPCTEIH 225

Query: 244 YDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSIL 303
           YD  G   A        P  +E+WN+VF+Q NRE+DGSL+PLP +HVDTG+G ERL ++L
Sbjct: 226 YDLAGGVGA--------PQLVELWNLVFMQHNREADGSLQPLPQRHVDTGMGLERLVAVL 277

Query: 304 QNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIAD 363
           Q K S YDTD+F P+ +AIQQ   A PY G+VG  D  + D AYRVVADHIRTLS  I+D
Sbjct: 278 QGKHSTYDTDLFSPLLNAIQQGCRAPPYLGRVGVADEGRTDTAYRVVADHIRTLSVCISD 337

Query: 364 GSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHI 423
           G  PG  G   VLRRILRRAVR+  E+LKA  GF   LV +VV+ +GD +PEL++  A I
Sbjct: 338 GVFPGMSGPPLVLRRILRRAVRFSVEILKAPPGFLGSLVPVVVETLGDAYPELQRNSAQI 397

Query: 424 REIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAF---ILWDT-----YGFPLDL 475
             +++ +EA+F  +L +G     +       + L   D F   + W        G PLD+
Sbjct: 398 ANLVSEDEAAFLASLERGRRIIDRTL-----RTLGPSDMFPAEVAWSLSLCGDLGLPLDM 452

Query: 476 TQLMAEERGLLVDIEGFNN-AMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATD 534
            +LM EE+G+ +D  G    A +EA+ R+R A+  +  G + +D  A   L ++GV  TD
Sbjct: 453 VELMLEEKGVQLDSAGLERLAQEEAQHRARQAEPVKKQG-LWLDVHALGELQRQGVPPTD 511

Query: 535 DSFKFIW---------FQDHKSVIKAIYT-GSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
           DS K+ +         F   ++ +  +YT     + SV  G   G++L  ++FYAEQGGQ
Sbjct: 512 DSPKYNYSLQPSGSYEFGTCEAQVLQLYTEDGTAVASVGKGQRCGLLLDRTNFYAEQGGQ 571

Query: 585 IFDEGFI-----EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRK 639
             D G++     E +   F V   Q+ GGF++H     E      +G++V   VD   R 
Sbjct: 572 ASDRGYLVRAGQEDVL--FPVARAQVCGGFILHEAVAPEC---LQIGDQVQLHVDKAWRL 626

Query: 640 LIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNE 699
                HT TH+LN+ALR+ LG   +Q+GS + PE+LR D +   P+ PE LR +E+ V E
Sbjct: 627 GCMAKHTATHLLNWALRQTLGPGTEQQGSHLSPEQLRLDVTTQTPLTPEQLRAVENTVQE 686

Query: 700 QIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSI 759
            +  +  V+ +E  LA    + GLR+   EVYPDPVRVV++G  V   L DP ++  L  
Sbjct: 687 AVGQDEAVYMEEVPLALTAQVPGLRS-LDEVYPDPVRVVSVGVPVAHAL-DPASQAALQT 744

Query: 760 SAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDAS 819
           S ELC GTHL  T       ++ +  ++KG  R+ A+T   A +A E   SL +EV  A+
Sbjct: 745 SVELCCGTHLLRTGAVGDLVIIGDRQLSKGTTRLLAITGEQAQQARELGQSLAQEVKAAT 804

Query: 820 K 820
           +
Sbjct: 805 E 805


>gi|38569417|ref|NP_065796.1| alanine--tRNA ligase, mitochondrial [Homo sapiens]
 gi|124297995|gb|AAI31729.1| Alanyl-tRNA synthetase 2, mitochondrial (putative) [Homo sapiens]
 gi|208967617|dbj|BAG72454.1| alanyl-tRNA synthetase 2, mitochondrial [synthetic construct]
          Length = 985

 Score =  651 bits (1680), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/781 (45%), Positives = 479/781 (61%), Gaps = 48/781 (6%)

Query: 67  FFKFFEDKN-HVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRACNT 125
           F  FF D++ H    S+ V P  DP+LLF NAGMNQ+KPIFLGT DP ++++   R  N+
Sbjct: 46  FLNFFRDRHGHRLVPSASVRPRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRRVANS 105

Query: 126 QKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFG-DYFKNEAIEWAWELLTKVYRLPAD 184
           QKC+RAGG HNDL+DVG+D  HHTFFEMLGNW+FG +YFK EA   AWELLT+VY +P +
Sbjct: 106 QKCVRAGGHHNDLEDVGRDLSHHTFFEMLGNWAFGGEYFKEEACNMAWELLTQVYGIPEE 165

Query: 185 RLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGPCSEIH 243
           RL+ +YF GD KAGL PD E RDIWL   +PASRVL FG ++NFWEMGDTGPCGPC+EIH
Sbjct: 166 RLWISYFDGDPKAGLDPDLETRDIWLSLGVPASRVLSFGPQENFWEMGDTGPCGPCTEIH 225

Query: 244 YDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSIL 303
           YD  G   A        P  +E+WN+VF+Q NRE+DGSL+PLP +HVDTG+G ERL ++L
Sbjct: 226 YDLAGGVGA--------PQLVELWNLVFMQHNREADGSLQPLPQRHVDTGMGLERLVAVL 277

Query: 304 QNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIAD 363
           Q K S YDTD+F P+ +AIQQ   A PY G+VG  D  + D AYRVVADHIRTLS  I+D
Sbjct: 278 QGKHSTYDTDLFSPLLNAIQQGCRAPPYLGRVGVADEGRTDTAYRVVADHIRTLSVCISD 337

Query: 364 GSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHI 423
           G  PG  G   VLRRILRRAVR+  E+LKA  GF   LV +VV+ +GD +PEL++  A I
Sbjct: 338 GVFPGMSGPPLVLRRILRRAVRFSMEILKAPPGFLGSLVPVVVETLGDAYPELQRNSAQI 397

Query: 424 REIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAF---ILWDT-----YGFPLDL 475
             +++ +EA+F  +L +G     +       + L   D F   + W        G PLD+
Sbjct: 398 ANLVSEDEAAFLASLERGRRIIDRTL-----RTLGPSDMFPAEVAWSLSLCGDLGLPLDM 452

Query: 476 TQLMAEERGLLVDIEGFNN-AMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATD 534
            +LM EE+G+ +D  G    A +EA+ R+R A+  Q  G + +D  A   L ++GV  TD
Sbjct: 453 VELMLEEKGVQLDSAGLERLAQEEAQHRARQAEPVQKQG-LWLDVHALGELQRQGVPPTD 511

Query: 535 DSFKFIW---------FQDHKSVIKAIYT-GSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
           DS K+ +         F   ++ +  +YT     + SV  G   G++L  ++FYAEQGGQ
Sbjct: 512 DSPKYNYSLRPSGSYEFGTCEAQVLQLYTEDGTAVASVGKGQRCGLLLDRTNFYAEQGGQ 571

Query: 585 IFDEGFI-----EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRK 639
             D G++     E +   F V   Q+ GGF++H     E      +G++V   VD   R 
Sbjct: 572 ASDRGYLVRAGQEDVL--FPVARAQVCGGFILHEAVAPEC---LRLGDQVQLHVDEAWRL 626

Query: 640 LIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNE 699
                HT TH+LN+ALR+ LG   +Q+GS + PE+LR D +   P+ PE LR +E+ V E
Sbjct: 627 GCMAKHTATHLLNWALRQTLGPGTEQQGSHLNPEQLRLDVTTQTPLTPEQLRAVENTVQE 686

Query: 700 QIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSI 759
            +  +  V+ +E  LA    + GLR+   EVYPDPVRVV++G  V   L DP ++  L  
Sbjct: 687 AVGQDEAVYMEEVPLALTAQVPGLRS-LDEVYPDPVRVVSVGVPVAHAL-DPASQAALQT 744

Query: 760 SAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDAS 819
           S ELC GTHL  T       ++ +  ++KG  R+ AVT   A +A E   SL +EV  A+
Sbjct: 745 SVELCCGTHLLRTGAVGDLVIIGDRQLSKGTTRLLAVTGEQAQQARELGQSLAQEVKAAT 804

Query: 820 K 820
           +
Sbjct: 805 E 805


>gi|6331226|dbj|BAA86584.1| KIAA1270 protein [Homo sapiens]
          Length = 986

 Score =  651 bits (1679), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/781 (45%), Positives = 479/781 (61%), Gaps = 48/781 (6%)

Query: 67  FFKFFEDKN-HVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRACNT 125
           F  FF D++ H    S+ V P  DP+LLF NAGMNQ+KPIFLGT DP ++++   R  N+
Sbjct: 47  FLNFFRDRHGHRLVPSASVRPRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRRVANS 106

Query: 126 QKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFG-DYFKNEAIEWAWELLTKVYRLPAD 184
           QKC+RAGG HNDL+DVG+D  HHTFFEMLGNW+FG +YFK EA   AWELLT+VY +P +
Sbjct: 107 QKCVRAGGHHNDLEDVGRDLSHHTFFEMLGNWAFGGEYFKEEACNMAWELLTQVYGIPEE 166

Query: 185 RLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGPCSEIH 243
           RL+ +YF GD KAGL PD E RDIWL   +PASRVL FG ++NFWEMGDTGPCGPC+EIH
Sbjct: 167 RLWISYFDGDPKAGLDPDLETRDIWLSLGVPASRVLSFGPQENFWEMGDTGPCGPCTEIH 226

Query: 244 YDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSIL 303
           YD  G   A        P  +E+WN+VF+Q NRE+DGSL+PLP +HVDTG+G ERL ++L
Sbjct: 227 YDLAGGVGA--------PQLVELWNLVFMQHNREADGSLQPLPQRHVDTGMGLERLVAVL 278

Query: 304 QNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIAD 363
           Q K S YDTD+F P+ +AIQQ   A PY G+VG  D  + D AYRVVADHIRTLS  I+D
Sbjct: 279 QGKHSTYDTDLFSPLLNAIQQGCRAPPYLGRVGVADEGRTDTAYRVVADHIRTLSVCISD 338

Query: 364 GSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHI 423
           G  PG  G   VLRRILRRAVR+  E+LKA  GF   LV +VV+ +GD +PEL++  A I
Sbjct: 339 GVFPGMSGPPLVLRRILRRAVRFSMEILKAPPGFLGSLVPVVVETLGDAYPELQRNSAQI 398

Query: 424 REIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAF---ILWDT-----YGFPLDL 475
             +++ +EA+F  +L +G     +       + L   D F   + W        G PLD+
Sbjct: 399 ANLVSEDEAAFLASLERGRRIIDRTL-----RTLGPSDMFPAEVAWSLSLCGDLGLPLDM 453

Query: 476 TQLMAEERGLLVDIEGFNN-AMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATD 534
            +LM EE+G+ +D  G    A +EA+ R+R A+  Q  G + +D  A   L ++GV  TD
Sbjct: 454 VELMLEEKGVQLDSAGLERLAQEEAQHRARQAEPVQKQG-LWLDVHALGELQRQGVPPTD 512

Query: 535 DSFKFIW---------FQDHKSVIKAIYT-GSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
           DS K+ +         F   ++ +  +YT     + SV  G   G++L  ++FYAEQGGQ
Sbjct: 513 DSPKYNYSLRPSGSYEFGTCEAQVLQLYTEDGTAVASVGKGQRCGLLLDRTNFYAEQGGQ 572

Query: 585 IFDEGFI-----EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRK 639
             D G++     E +   F V   Q+ GGF++H     E      +G++V   VD   R 
Sbjct: 573 ASDRGYLVRAGQEDVL--FPVARAQVCGGFILHEAVAPEC---LRLGDQVQLHVDEAWRL 627

Query: 640 LIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNE 699
                HT TH+LN+ALR+ LG   +Q+GS + PE+LR D +   P+ PE LR +E+ V E
Sbjct: 628 GCMAKHTATHLLNWALRQTLGPGTEQQGSHLNPEQLRLDVTTQTPLTPEQLRAVENTVQE 687

Query: 700 QIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSI 759
            +  +  V+ +E  LA    + GLR+   EVYPDPVRVV++G  V   L DP ++  L  
Sbjct: 688 AVGQDEAVYMEEVPLALTAQVPGLRS-LDEVYPDPVRVVSVGVPVAHAL-DPASQAALQT 745

Query: 760 SAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDAS 819
           S ELC GTHL  T       ++ +  ++KG  R+ AVT   A +A E   SL +EV  A+
Sbjct: 746 SVELCCGTHLLRTGAVGDLVIIGDRQLSKGTTRLLAVTGEQAQQARELGQSLAQEVKAAT 805

Query: 820 K 820
           +
Sbjct: 806 E 806


>gi|74742244|sp|Q5JTZ9.1|SYAM_HUMAN RecName: Full=Alanine--tRNA ligase, mitochondrial; AltName:
           Full=Alanyl-tRNA synthetase; Short=AlaRS; Flags:
           Precursor
 gi|119624673|gb|EAX04268.1| alanyl-tRNA synthetase like [Homo sapiens]
          Length = 985

 Score =  651 bits (1679), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/781 (45%), Positives = 479/781 (61%), Gaps = 48/781 (6%)

Query: 67  FFKFFEDKN-HVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRACNT 125
           F  FF D++ H    S+ V P  DP+LLF NAGMNQ+KPIFLGT DP ++++   R  N+
Sbjct: 46  FLNFFRDRHGHRLVPSASVRPRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRRVANS 105

Query: 126 QKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFG-DYFKNEAIEWAWELLTKVYRLPAD 184
           QKC+RAGG HNDL+DVG+D  HHTFFEMLGNW+FG +YFK EA   AWELLT+VY +P +
Sbjct: 106 QKCVRAGGHHNDLEDVGRDLSHHTFFEMLGNWAFGGEYFKEEACNMAWELLTQVYGIPEE 165

Query: 185 RLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGPCSEIH 243
           RL+ +YF GD KAGL PD E RDIWL   +PASRVL FG ++NFWEMGDTGPCGPC+EIH
Sbjct: 166 RLWISYFDGDPKAGLDPDLETRDIWLSLGVPASRVLSFGPQENFWEMGDTGPCGPCTEIH 225

Query: 244 YDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSIL 303
           YD  G   A        P  +E+WN+VF+Q NRE+DGSL+PLP +HVDTG+G ERL ++L
Sbjct: 226 YDLAGGVGA--------PQLVELWNLVFMQHNREADGSLQPLPQRHVDTGMGLERLVAVL 277

Query: 304 QNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIAD 363
           Q K S YDTD+F P+ +AIQQ   A PY G+VG  D  + D AYRVVADHIRTLS  I+D
Sbjct: 278 QGKHSTYDTDLFSPLLNAIQQGCRAPPYLGRVGVADEGRTDTAYRVVADHIRTLSVCISD 337

Query: 364 GSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHI 423
           G  PG  G   VLRRILRRAVR+  E+LKA  GF   LV +VV+ +GD +PEL++  A I
Sbjct: 338 GIFPGMSGPPLVLRRILRRAVRFSMEILKAPPGFLGSLVPVVVETLGDAYPELQRNSAQI 397

Query: 424 REIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAF---ILWDT-----YGFPLDL 475
             +++ +EA+F  +L +G     +       + L   D F   + W        G PLD+
Sbjct: 398 ANLVSEDEAAFLASLERGRRIIDRTL-----RTLGPSDMFPAEVAWSLSLCGDLGLPLDM 452

Query: 476 TQLMAEERGLLVDIEGFNN-AMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATD 534
            +LM EE+G+ +D  G    A +EA+ R+R A+  Q  G + +D  A   L ++GV  TD
Sbjct: 453 VELMLEEKGVQLDSAGLERLAQEEAQHRARQAEPVQKQG-LWLDVHALGELQRQGVPPTD 511

Query: 535 DSFKFIW---------FQDHKSVIKAIYT-GSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
           DS K+ +         F   ++ +  +YT     + SV  G   G++L  ++FYAEQGGQ
Sbjct: 512 DSPKYNYSLRPSGSYEFGTCEAQVLQLYTEDGTAVASVGKGQRCGLLLDRTNFYAEQGGQ 571

Query: 585 IFDEGFI-----EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRK 639
             D G++     E +   F V   Q+ GGF++H     E      +G++V   VD   R 
Sbjct: 572 ASDRGYLVRAGQEDVL--FPVARAQVCGGFILHEAVAPEC---LRLGDQVQLHVDEAWRL 626

Query: 640 LIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNE 699
                HT TH+LN+ALR+ LG   +Q+GS + PE+LR D +   P+ PE LR +E+ V E
Sbjct: 627 GCMAKHTATHLLNWALRQTLGPGTEQQGSHLNPEQLRLDVTTQTPLTPEQLRAVENTVQE 686

Query: 700 QIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSI 759
            +  +  V+ +E  LA    + GLR+   EVYPDPVRVV++G  V   L DP ++  L  
Sbjct: 687 AVGQDEAVYMEEVPLALTAQVPGLRS-LDEVYPDPVRVVSVGVPVAHAL-DPASQAALQT 744

Query: 760 SAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDAS 819
           S ELC GTHL  T       ++ +  ++KG  R+ AVT   A +A E   SL +EV  A+
Sbjct: 745 SVELCCGTHLLRTGAVGDLVIIGDRQLSKGTTRLLAVTGEQAQQARELGQSLAQEVKAAT 804

Query: 820 K 820
           +
Sbjct: 805 E 805


>gi|193214313|ref|YP_001995512.1| alanyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
 gi|193087790|gb|ACF13065.1| alanyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
          Length = 887

 Score =  651 bits (1679), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/773 (46%), Positives = 470/773 (60%), Gaps = 83/773 (10%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R  F  FF  K H   +S+PV+P +DPTLLF NAGMNQ+K +FLG           
Sbjct: 3   SKEIRQAFLDFFTSKQHEIVRSAPVIPADDPTLLFTNAGMNQFKDVFLGIGS-----RPY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           TRA +TQKCIRA GKHNDL+DVG+DTYHHTFFEMLGNWSFGDY+K EAI WAWELLT V+
Sbjct: 58  TRAADTQKCIRASGKHNDLEDVGRDTYHHTFFEMLGNWSFGDYYKKEAITWAWELLTDVW 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF--LPASRVLPFGCKDNFWEMGDTGPCG 237
           +LP DRLYAT +          D+EA ++W     + AS +   G KDNFWEMG+TGPCG
Sbjct: 118 KLPKDRLYATVY--------KDDDEAFELWKSETDIAASHIQRHGEKDNFWEMGETGPCG 169

Query: 238 PCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFE 297
           PCSEIH D T ++  A+LVN   P  IEIWN+VFIQ+NR++ G L PLPAKHVDTG+GFE
Sbjct: 170 PCSEIHIDLTPDKSGAALVNAGRPEVIEIWNLVFIQYNRDAAGKLHPLPAKHVDTGMGFE 229

Query: 298 RLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTL 357
           R+ ++LQ K SNYD+DVF PI   I   TG + Y G + +D     DMA RV+ADHIRTL
Sbjct: 230 RIAAVLQGKTSNYDSDVFTPILKKIGDITG-KTYGGSMESD----TDMAMRVLADHIRTL 284

Query: 358 SFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELK 417
           +FAIADG  P NEGR YVLRRILRR VRY  ++ + +   +  L  ++ + MGDVFPEL 
Sbjct: 285 AFAIADGGTPSNEGRGYVLRRILRRGVRYARQLGQNEPTLYK-LTEVLCETMGDVFPELV 343

Query: 418 QREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ---GKVLSGQDAFILWDTYGFPLD 474
           +R   I ++I AEE SF +TL +GIE F    + ++   GKV+ G DAF L+DTYGFPLD
Sbjct: 344 ERRQVIEQVIKAEEESFLQTLDRGIEIFNGVTEKLKKSGGKVIDGADAFKLYDTYGFPLD 403

Query: 475 LTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATD 534
           LT+LMAEE GL VD +GF   M E ++R+R  + +++  A                   +
Sbjct: 404 LTRLMAEEIGLSVDEDGFLANMKEQKDRARKDRKEKSAVA-------------------E 444

Query: 535 DSFKFIWFQDHKSVIKAIYTGSEFIE-------SVVPGNEVGIVLASSSFYAEQGGQIFD 587
           +S ++  F +    +K  ++G E +E       +   G ++ +VL  + FYAE GGQ  D
Sbjct: 445 ESGEWTIFAE---TLKTEFSGYETLEQKSRIARAKKAGEKLLLVLEKTPFYAESGGQQGD 501

Query: 588 EGFIEGLFGSFYVRNVQIYGGFVIHI-GSLTEGAGRFSVGEEVI-----------CKVDY 635
            G IE    SF++ + Q  G  V+HI   +T+     +V  E              KV+ 
Sbjct: 502 SGEIETDAFSFHISDTQKEGDLVLHIVDKITDKESGDAVAIENFDLEKLSSLEADAKVNA 561

Query: 636 DRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIES 695
           + R   A NHT TH+L+ ALREVLG+HV QKGS+V PE+LRFDFSH + V  E + +IE 
Sbjct: 562 ETRGATARNHTATHLLHEALREVLGEHVQQKGSLVGPERLRFDFSHFERVSEEAMAQIEQ 621

Query: 696 IVNEQIKAELDVFSK-EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENK 754
           IVN QI+    V    +    +AK +  L A FG+ Y D VRVV +              
Sbjct: 622 IVNAQIRMAKAVKKHADVPFEDAKKMGAL-AFFGDKYGDFVRVVEVP------------- 667

Query: 755 EWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEA 807
                S E CGGTHL N  E     ++SE  IA GIRR+ AVT  +A   F +
Sbjct: 668 ---GYSVEFCGGTHLDNIGEIGLLKIVSESSIASGIRRVEAVTGKVAEDLFRS 717


>gi|114607605|ref|XP_518510.2| PREDICTED: alanine--tRNA ligase, mitochondrial [Pan troglodytes]
          Length = 985

 Score =  650 bits (1678), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/781 (45%), Positives = 479/781 (61%), Gaps = 48/781 (6%)

Query: 67  FFKFFEDKN-HVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRACNT 125
           F  FF D++ H    S+ V P  DP+LLF NAGMNQ+KPIFLGT DP ++++   R  N+
Sbjct: 46  FLNFFRDRHGHRLVPSASVRPRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRRVANS 105

Query: 126 QKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFG-DYFKNEAIEWAWELLTKVYRLPAD 184
           QKC+RAGG HNDL+DVG+D  HHTFFEMLGNW+FG +YFK EA   AWELLT+VY +P +
Sbjct: 106 QKCVRAGGHHNDLEDVGRDLSHHTFFEMLGNWAFGGEYFKEEACNMAWELLTQVYGIPEE 165

Query: 185 RLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGPCSEIH 243
           RL+ +YF GD KAGL PD E RDIWL   +PASRVL FG ++NFWEMGDTGPCGPC+EIH
Sbjct: 166 RLWISYFDGDPKAGLDPDLETRDIWLSLGVPASRVLSFGPQENFWEMGDTGPCGPCTEIH 225

Query: 244 YDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSIL 303
           YD  G   A        P  +E+WN+VF+Q NRE+DGSL+PLP +HVDTG+G ERL ++L
Sbjct: 226 YDLAGGVGA--------PQLVELWNLVFMQHNREADGSLQPLPQRHVDTGMGLERLVAVL 277

Query: 304 QNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIAD 363
           Q K S YDTD+F P+ +AIQQ   A PY G+VG  D  + D AYRVVADHIRTLS  I+D
Sbjct: 278 QGKHSTYDTDLFSPLLNAIQQGCRAPPYLGRVGVADEGRTDTAYRVVADHIRTLSVCISD 337

Query: 364 GSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHI 423
           G  PG  G   VLRRILRRAVR+  E+LKA  GF   LV +VV+ +GD +PEL++  A I
Sbjct: 338 GIFPGMSGPPLVLRRILRRAVRFSMEILKAPPGFLGSLVPVVVETLGDAYPELQRNSAQI 397

Query: 424 REIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAF---ILWDT-----YGFPLDL 475
             +++ +EA+F  +L +G     +       + L   D F   + W        G PLD+
Sbjct: 398 ANLVSEDEAAFLASLERGRRIIDRTL-----RTLGPSDMFPAEVAWSLSLCGDLGLPLDM 452

Query: 476 TQLMAEERGLLVDIEGFNN-AMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATD 534
            +LM EE+G+ +D  G    A +EA+ R+R A+  Q  G + +D  A   L ++GV  TD
Sbjct: 453 VELMLEEKGVQLDSAGLERLAQEEAQHRARQAEPVQKQG-LWLDVHALGELQRQGVPPTD 511

Query: 535 DSFKFIW---------FQDHKSVIKAIYT-GSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
           DS K+ +         F   ++ +  +YT     + SV  G   G++L  ++FYAEQGGQ
Sbjct: 512 DSPKYNYSLRPSGSYEFGTCEAQVLQLYTEDGTAVASVGKGQRCGLLLDRTNFYAEQGGQ 571

Query: 585 IFDEGFI-----EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRK 639
             D G++     E +   F V   Q+ GGF++H     E      +G++V   VD   R 
Sbjct: 572 ASDRGYLVRAGQEDVL--FPVARAQVCGGFILHEAVAPEC---LRLGDQVQLHVDEAWRL 626

Query: 640 LIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNE 699
                HT TH+LN+ALR+ LG   +Q+GS + PE+LR D +   P+ PE LR +E+ V E
Sbjct: 627 GCMAKHTATHLLNWALRQTLGPGTEQQGSHLNPEQLRLDVTTQTPLTPEQLRAVENTVQE 686

Query: 700 QIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSI 759
            +  +  V+ +E  LA    + GLR+   EVYPDPVRVV++G  V   L DP ++  L  
Sbjct: 687 AVGQDEAVYMEEVPLALTAQVPGLRS-LDEVYPDPVRVVSVGVPVAHAL-DPASQAALQT 744

Query: 760 SAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDAS 819
           S ELC GTHL  T       ++ +  ++KG  R+ A+T   A +A E   SL +EV  A+
Sbjct: 745 SVELCCGTHLLRTGAVGDLVIIGDRQLSKGTTRLLAITGEQAQQARELGQSLAQEVKAAT 804

Query: 820 K 820
           +
Sbjct: 805 E 805


>gi|325104121|ref|YP_004273775.1| alanyl-tRNA synthetase [Pedobacter saltans DSM 12145]
 gi|324972969|gb|ADY51953.1| alanyl-tRNA synthetase [Pedobacter saltans DSM 12145]
          Length = 880

 Score =  649 bits (1673), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/801 (44%), Positives = 477/801 (59%), Gaps = 59/801 (7%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R  F  FF  K H    S+P+V  NDPTL+F NAGMNQ+K +FLG A       K 
Sbjct: 5   AKEIRQAFLDFFASKGHQIVPSAPIVVKNDPTLMFTNAGMNQFKDLFLGEAP-----IKY 59

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  +TQ+C+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI W+WELLT V 
Sbjct: 60  PRVADTQRCLRVSGKHNDLEEVGIDTYHHTMFEMLGNWSFGDYFKKEAIAWSWELLTDVL 119

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +L  DRLY T F GDEK GL  D +A D W  F+P SR+L    KDNFWEMGDTGPCGPC
Sbjct: 120 KLDKDRLYVTVFEGDEKEGLPMDQDAYDFWKAFVPESRILKGNKKDNFWEMGDTGPCGPC 179

Query: 240 SEIHYDRTGNR-----DAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH+D   +      D A+LVN DDP  IEIWN VF++FNR  DGSLK LPA+HVDTG+
Sbjct: 180 SEIHFDNRSDEERAKVDGATLVNADDPQVIEIWNNVFMEFNRLKDGSLKKLPAQHVDTGM 239

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDAD-KVDMAYRVVADH 353
           GFERL  ++Q K SNYD+DVF PI D I ++ G  PY+     DD D    +A RV+ADH
Sbjct: 240 GFERLVRVIQGKTSNYDSDVFTPIIDFISKSAGI-PYNAAATPDDKDWGQAVAMRVMADH 298

Query: 354 IRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVF 413
           IR ++FAIADG  P N    YV+RRILRRAVRY  + L  ++ F N LV ++      VF
Sbjct: 299 IRAIAFAIADGQLPSNNKAGYVIRRILRRAVRYAYQYLGFKEPFLNKLVPLLAAQFKGVF 358

Query: 414 PELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPL 473
            EL  ++  ++++I  EE SF +TL  GI +F+K  QD Q + + G  AF L+DTYGFP+
Sbjct: 359 DELISQQDFVQKVILEEENSFLRTLENGINRFEKYIQDNQDRQIDGAFAFELYDTYGFPI 418

Query: 474 DLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLAT 533
           DLT+LMA E+GL VD+ GF+  + + +ERSR+A    AG  I ++               
Sbjct: 419 DLTELMAREKGLTVDMAGFDTELQKQKERSRAATAIDAGDWITVN--------------E 464

Query: 534 DDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNE-VGIVLASSSFYAEQGGQIFDEGFIE 592
           DD  +F+ + +  +  + +    ++ +    G E   +VL  + FYAE GGQ+ D G +E
Sbjct: 465 DDEVEFVGYDEVVATSRIL----KYRKVKAKGKEQYQLVLDVTPFYAESGGQVGDSGVLE 520

Query: 593 GLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLN 652
               S  + + +   G +IH   +       ++    I KV+   R+L   NH+ TH+L+
Sbjct: 521 NENESIIINDTKKENGLIIHFADVLP----HNLNATFIAKVNVHTRRLTENNHSATHLLH 576

Query: 653 FALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEA 712
            AL+ VLGDHV+QKGS+V  + LRFDFSH   V  + + +IE+IVN++++  + +  +  
Sbjct: 577 AALKAVLGDHVNQKGSLVNADVLRFDFSHFSKVTEQEIAKIEAIVNQKVRENIPLKEERN 636

Query: 713 TLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNT 772
              +    +G+ A+FGE Y D VRV+                   S S ELCGGTH+  T
Sbjct: 637 VPYQKALESGVTALFGEKYGDYVRVITFDD---------------SYSKELCGGTHVKAT 681

Query: 773 REAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACS-------LEKEVDDASKIEGSL 825
            +   F ++SE  +A G+RRI A+T   A +              L K   D +K   SL
Sbjct: 682 GQIGYFKIVSESAVAAGVRRIEAITADKAEEYINNQAQLLAVLKELLKNPKDLTKSVESL 741

Query: 826 LEKNQVRKAQKKVAEENLQKA 846
           LE+N   K +K++ +  L+KA
Sbjct: 742 LEENN--KLKKEIEKSVLEKA 760


>gi|157818067|ref|NP_001100361.1| alanine--tRNA ligase, mitochondrial [Rattus norvegicus]
 gi|313471549|sp|D3ZX08.1|SYAM_RAT RecName: Full=Alanine--tRNA ligase, mitochondrial; AltName:
           Full=Alanyl-tRNA synthetase; Short=AlaRS; Flags:
           Precursor
 gi|149069292|gb|EDM18733.1| alanyl-tRNA synthetase like (predicted) [Rattus norvegicus]
          Length = 985

 Score =  648 bits (1671), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/813 (45%), Positives = 491/813 (60%), Gaps = 55/813 (6%)

Query: 63  VRDTFFKFFEDKN-HVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           VRD F  FF D++ H    S+ V P  DP+LLF NAGMNQ+KPIFLGT DP ++++   R
Sbjct: 37  VRDAFLSFFRDRHGHRLVPSASVRPRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRR 96

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFG-DYFKNEAIEWAWELLTKVYR 180
             N+QKC+RAGG+HNDL+DVG+D  HHTFFEMLGNW+FG +YFK EA   AWELLT+VY 
Sbjct: 97  VANSQKCVRAGGRHNDLEDVGRDLSHHTFFEMLGNWAFGGEYFKKEACSMAWELLTQVYG 156

Query: 181 LPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +P DRL+ +YF GD K GL PD E RDIWL   +PASRVL FG ++NFWEMGDTGPCGPC
Sbjct: 157 IPEDRLWVSYFSGDSKTGLDPDLETRDIWLSLGVPASRVLSFGLQENFWEMGDTGPCGPC 216

Query: 240 SEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERL 299
           +EIHYD  G            P  +E+WN+VF+Q  RE+DGSL  LP +HVDTG+G ERL
Sbjct: 217 TEIHYDLAGGMGP--------PQLVELWNLVFMQHYREADGSLHLLPQQHVDTGMGLERL 268

Query: 300 TSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSF 359
            ++LQ K S YDTD+F P+ DAI Q+    PYSG+VGA D  ++D AYRVVADHIRTLS 
Sbjct: 269 VAVLQGKHSTYDTDLFSPLLDAIHQSCRVPPYSGRVGAADEGRIDTAYRVVADHIRTLSV 328

Query: 360 AIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQR 419
            IADG  PG  G   VLRRILRRAVRY +EVL+A  GF   LV +VV  +G  +PEL++ 
Sbjct: 329 CIADGVSPGMSGAPLVLRRILRRAVRYSTEVLQAPPGFLGNLVPVVVATLGAAYPELQKN 388

Query: 420 EA-----HIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAF---ILWD---- 467
                   I  +++ +EA+F  +L +G     +       K L   D F   + W     
Sbjct: 389 SVKVLIWEIANLVSEDEAAFLASLQRGRRIIDRTV-----KRLGPSDLFPAEVAWSLSLS 443

Query: 468 -TYGFPLDLTQLMAEERGLLVDIEGFNN-AMDEARERSRSAQNKQAGGAIVMDADATAAL 525
              G PLDL QLM EE+G+ +D  G    A  EA+ R++ A+  Q  G + +D  A   L
Sbjct: 444 GNLGIPLDLVQLMLEEKGVKLDTAGLEQLAQKEAQHRAQQAEAAQEEG-LCLDVHALEEL 502

Query: 526 HKRGVLATDDSFKFIW---------FQDHKSVIKAIY--TGSEFIESVVPGNEVGIVLAS 574
           H++G+  TDDS K+ +         F   ++ +  +Y  TG+  + SV  G   G++L  
Sbjct: 503 HRQGIPTTDDSPKYNYSLRPNGDYEFGLCEAQVLQLYSETGTA-VASVGEGQRCGLLLDR 561

Query: 575 SSFYAEQGGQIFDEGFIEGLFGS---FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVIC 631
           ++FYAEQGGQ  D G++         F V   Q+ GGF++H     E      VG+ V  
Sbjct: 562 TNFYAEQGGQASDRGYLIRTGQQDVLFPVARAQVCGGFILHEAMAPEC---LQVGDRVQL 618

Query: 632 KVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLR 691
            VD   R      HT TH+LN+ALR+ LG   +Q+GS + PE+LRFD +   P+  E LR
Sbjct: 619 YVDKAWRMGCMVKHTATHLLNWALRQTLGPTTEQRGSHLNPERLRFDVATQTPLTTEQLR 678

Query: 692 RIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADP 751
            +ES V E +  +  V+ +E  LA    I GLR+   EVYPDPVRVV++G  V   LA P
Sbjct: 679 TVESYVQEAVGQDKPVYMEEVPLAHTARIPGLRS-LDEVYPDPVRVVSVGVPVAQALA-P 736

Query: 752 ENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSL 811
            ++  L  S ELC GTHL +T       ++ +  + KGI R+ A+T   A +A E   SL
Sbjct: 737 ASQAALQTSVELCCGTHLLSTGAVGDLVIIGDRQLVKGITRLLAITGEQAQQAREVGQSL 796

Query: 812 EKEVDDASK--IEGS--LLEKNQVRKAQKKVAE 840
            +EV+ AS+    GS  LLE +++ K   ++ E
Sbjct: 797 SQEVEVASERLSRGSRDLLEAHRLSKDIGRLIE 829


>gi|395534200|ref|XP_003769135.1| PREDICTED: alanine--tRNA ligase, mitochondrial [Sarcophilus
           harrisii]
          Length = 990

 Score =  645 bits (1663), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/796 (44%), Positives = 488/796 (61%), Gaps = 40/796 (5%)

Query: 63  VRDTFFKFFEDK-NHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           VR  F  FF D+  H    S+ V P +DP LLF NAGMNQ+KPIFLGT DP ++L++  R
Sbjct: 47  VRTAFLHFFRDRYGHQLVPSASVRPRSDPGLLFVNAGMNQFKPIFLGTVDPRSELARFRR 106

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFG-DYFKNEAIEWAWELLTKVYR 180
             N+QKC+R GGKHNDL+DVG+D  HHTFFEMLGNW+FG +YFK EA   AWELLT+VY 
Sbjct: 107 VANSQKCVRTGGKHNDLEDVGRDLSHHTFFEMLGNWAFGGEYFKEEACSMAWELLTQVYG 166

Query: 181 LPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +P DRL+ TYF G+   GLAPD E+RDIWL   +P++RVLPFG  +NFWEMG+TGPCGPC
Sbjct: 167 IPQDRLWVTYFDGNPSEGLAPDYESRDIWLSLGVPSTRVLPFGSMENFWEMGETGPCGPC 226

Query: 240 SEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERL 299
           +EIHYD +             P  +E+WN+VF+Q+NRE+D SL+PLP +HVDTG+G ERL
Sbjct: 227 TEIHYDLSAG--------VGPPQLVELWNLVFMQYNREADRSLQPLPQRHVDTGMGLERL 278

Query: 300 TSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSF 359
            ++LQNK S YDTD+F P+  AI Q   A PY G VG  D  ++DMAYRVVADH+RTLS 
Sbjct: 279 VAVLQNKHSTYDTDLFSPLLTAIHQGCRAPPYQGHVGVADKGRIDMAYRVVADHVRTLSI 338

Query: 360 AIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQR 419
            +ADG  PG  G   +LR+ILRRA+R+ SEVL+A  GF + LV IVV+++GD +PEL++ 
Sbjct: 339 CMADGVYPGMTGASLILRQILRRAIRFSSEVLQAPPGFLSSLVPIVVEILGDAYPELQKN 398

Query: 420 EAHIREIIAAEEASFGKTLLKGIEKFKKA-AQDVQGKVLSGQDAFILWDTYGFPLDLTQL 478
            + I  +I  EE +F   L +G    ++  +Q    ++   + A+ L    G PLDL  L
Sbjct: 399 RSQIVSLITEEEGAFLSCLERGRRIIERTLSQLGPSELFPAEVAWSLSGNLGLPLDLVGL 458

Query: 479 MAEERGLLVDIEGFNN-AMDEARERSRSAQNKQAGG-AIVMDADATAALHKRGVLATDDS 536
           M EE+G+ +D  G    + +EA+ RS++ Q K A    + +D  A   L K+GV  TDDS
Sbjct: 459 MLEEKGIQLDSAGLQQLSQEEAQRRSQAQQAKPAEKLELCLDVHALGHLRKQGVPPTDDS 518

Query: 537 FKFIW---------FQDHKSVIKAIYT-GSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
            K+ +         F   ++ I  +Y+     I+SV  G   G++L  + FYAEQGGQ  
Sbjct: 519 SKYNYSLLPNGCYEFGTCEAEIIRLYSLDGVAIDSVGGGQRCGLLLDKTCFYAEQGGQAS 578

Query: 587 DEGFI-----EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLI 641
           D G++     + +   F V   Q YGGF++H     E      VG++V   VD + R   
Sbjct: 579 DRGYLICKGQQDVL--FPVIGAQTYGGFILHEVIAPE---TLKVGDQVQLYVDEEWRLGC 633

Query: 642 APNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQI 701
              HT TH+L++ALR+ LG   +Q GS + PE+LRFD S    + P+ L+ +E  + E +
Sbjct: 634 MKKHTATHLLSWALRQELGPGTEQCGSHLSPERLRFDVSTLASLTPKQLQTVEKTIQEAV 693

Query: 702 KAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISA 761
             +  V+  E  L     + GLR+   E+YPDPVRVV++G  V  +LA P ++  L  S 
Sbjct: 694 GRDEPVYMAEVALELTTQVPGLRS-LNEIYPDPVRVVSVGVPVASVLA-PTSQAALHTSV 751

Query: 762 ELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKI 821
           ELC GTHL  T       ++ E  ++KGI R+ AVT   A +A +   +L +EV+     
Sbjct: 752 ELCCGTHLLRTGAIGDLTIVGERQLSKGIIRLVAVTGEQAQQARDVGQNLAEEVEATV-- 809

Query: 822 EGSLLEKNQ-VRKAQK 836
              L + NQ +R AQ+
Sbjct: 810 -ARLSQGNQDIRMAQQ 824


>gi|193213512|ref|YP_001999465.1| alanyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
 gi|193086989|gb|ACF12265.1| alanyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
          Length = 885

 Score =  644 bits (1661), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/929 (41%), Positives = 518/929 (55%), Gaps = 88/929 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R +F  FF  K H   +S+PV+P  DPTLLF NAGMNQ+K +FLG         + TR
Sbjct: 5   EIRQSFLDFFAAKEHRIVRSAPVIPAEDPTLLFTNAGMNQFKDVFLGKG-----TREYTR 59

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A +TQKCIRA GKHNDL+DVG+DTYHHTFFEMLGNWSFGDY+K EAI WAWEL+T V++L
Sbjct: 60  AADTQKCIRASGKHNDLEDVGRDTYHHTFFEMLGNWSFGDYYKKEAIGWAWELMTDVWKL 119

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLKF--LPASRVLPFGCKDNFWEMGDTGPCGPC 239
           P +RLYAT +  DE        E+  +W     +  S +L FG KDNFWEMG+TGPCGPC
Sbjct: 120 PKERLYATVYHDDE--------ESFKLWQSETDIEHSHILKFGDKDNFWEMGETGPCGPC 171

Query: 240 SEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERL 299
           SEIH D T +     LVN  D   IE+WN+VFIQ++R++DGSL+PLP KHVDTG+GFER+
Sbjct: 172 SEIHIDLTPDGSGGPLVNVGDHRVIELWNLVFIQYDRQADGSLQPLPQKHVDTGMGFERV 231

Query: 300 TSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSF 359
           T++LQ K SNYD+DVF P+F+ I + TG R Y+  + +      D+A RV+ADH RTL+F
Sbjct: 232 TAVLQGKSSNYDSDVFTPLFEKITELTGVR-YTASLDS----ATDIAMRVIADHCRTLTF 286

Query: 360 AIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQR 419
           A++DG+ PGNEGR YVLRRILRRAVRY    L   +     +V ++V+ MGDVFPEL+++
Sbjct: 287 ALSDGAMPGNEGRGYVLRRILRRAVRYAG-TLGCHEPIMYKMVEVLVRTMGDVFPELEKQ 345

Query: 420 EAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ---GKVLSGQDAFILWDTYGFPLDLT 476
           +  + +II AEE SF  TL +G E F +    ++      +SG+DAF L+DT+GFPLDLT
Sbjct: 346 QPTVEKIIRAEEESFLVTLGRGTEIFNEVVAGMKTSGSTTISGEDAFKLYDTFGFPLDLT 405

Query: 477 QLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDS 536
           +LMA E G  +D EGF + M E + R+R            MD        K  +   DD 
Sbjct: 406 RLMAAEVGFGIDEEGFEHCMTEQKTRAR------------MD-------RKDKMQVQDDG 446

Query: 537 FKFIWFQDHKSV----IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIE 592
            ++ WF             + T +        G+ + +VL  + FYAE GGQ+ D G IE
Sbjct: 447 GEWQWFAPEAPTEFVGYDTLETSATLTAVKTGGDRLMVVLDRTPFYAESGGQVGDHGTIE 506

Query: 593 GLFGSFYVRNVQIYGGFVIHIGSLTEGAGR----------FSVGEEVICKVDYDRRKLIA 642
                  V + +  G  VIH  +      R          F     V   VD DRR    
Sbjct: 507 TDDYRLDVTDTRKDGELVIHFVTSARDKVRDCAVSPADLSFEGAVSVEAAVDRDRRVATE 566

Query: 643 PNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIK 702
            NHT TH+L+ ALR+VLG+HV QKGS+V PE+LRFDFSH   V PE + ++E  VN QI+
Sbjct: 567 RNHTATHLLHAALRKVLGEHVQQKGSLVTPERLRFDFSHFSKVSPEEMEQVEHEVNAQIR 626

Query: 703 AELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAE 762
               V        E     G  A FG+ Y D VRVV +                  IS E
Sbjct: 627 KAAGVTKHADVPYEEALELGALAFFGDKYADRVRVVDVP----------------GISIE 670

Query: 763 LCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLA-------YKAFEAACSLEKEV 815
           LCGGTH+ N  +     ++SE  +A GIRRI AVT   A       Y+  +   +L K  
Sbjct: 671 LCGGTHVGNIGQIGMVKIVSESSVAAGIRRIEAVTGAAAEALLWQEYRNLQEIKNLLKLK 730

Query: 816 DD---ASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVG 872
            D     KI+  L EK  +    K++ E  L   +   + T  +AA  G    ++    G
Sbjct: 731 ADEEAGPKIKELLDEKKAL---DKQLQESRLSGLLNQLSATLASAAEIGGCRIMTEQLDG 787

Query: 873 LDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQ 932
           L    +R+A + + EQ      +  +  T  K  +     +++ + K++   + +  A  
Sbjct: 788 LGGDELRQAAVALREQASCAAGLLCS-VTDGKVFLVGFASDEAVKLKKINAGKLVKEAAA 846

Query: 933 PLKGRCGKGKGGLASGQGTDAAQVTPAMD 961
            +KG  G GK  LA+  G D   +  A++
Sbjct: 847 CVKG-GGGGKPELATAGGKDPDGIGKAIE 874


>gi|406663250|ref|ZP_11071314.1| Alanine--tRNA ligase [Cecembia lonarensis LW9]
 gi|405552701|gb|EKB48054.1| Alanine--tRNA ligase [Cecembia lonarensis LW9]
          Length = 877

 Score =  643 bits (1659), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/831 (43%), Positives = 480/831 (57%), Gaps = 72/831 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A K+R TF  FF+ K H    SSP+V  NDPTL+F NAGMNQ+K  FLG   P     K 
Sbjct: 3   AKKIRSTFIAFFQSKQHQYVASSPIVVKNDPTLMFTNAGMNQFKDFFLGNDIP-----KF 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           TR  N+QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK +AIEWAWELLT+VY
Sbjct: 58  TRVANSQKCLRVSGKHNDLEEVGVDTYHHTMFEMLGNWSFGDYFKKDAIEWAWELLTEVY 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
            LP DRLY + FGGD    L  D EA DIW   +P  R+L    KDNFWEMGDTGPCGPC
Sbjct: 118 GLPKDRLYVSVFGGDAGDKLEKDTEAFDIWKGIVPEDRILFGSKKDNFWEMGDTGPCGPC 177

Query: 240 SEIHYD-RT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D RT       +   LVNND P  IEIWN+VF+QFNR +DGSLK LPAKHVDTG+
Sbjct: 178 SEIHIDLRTEEERNKENGYDLVNNDHPQVIEIWNLVFMQFNRLADGSLKELPAKHVDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   +Q K SNYDTDVFMP   A++  +G + Y    G D  +K D+A RV+ DHI
Sbjct: 238 GFERLVRAIQQKSSNYDTDVFMPFIHAVEMKSG-KSY----GRD--EKTDIAMRVIVDHI 290

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R ++F IADG  P N    YV+RRILRRAVRYG   L  Q  F   L+ ++ +  G++FP
Sbjct: 291 RAIAFTIADGQLPSNNKAGYVIRRILRRAVRYGYTFLGFQKPFLYELMPLLAENFGEIFP 350

Query: 415 ELKQREAHIREIIAAEEASFGKTL---LKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGF 471
           E+  ++  I ++I  EEASF +TL   LK +++ K+       +++ G+ AF L+DTYGF
Sbjct: 351 EVAAQQDFIAKVIMEEEASFLRTLDNGLKKLDQIKEEMSKTGSQLVDGKVAFELYDTYGF 410

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT L+A E G  VD  GF   M+  + RSR+A  ++ G       D      + GV 
Sbjct: 411 PLDLTSLIARESGYSVDESGFTKEMEVQKSRSRAAAEQETG-------DWVMVHEEEGV- 462

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
              +   + + Q    +IK      +       G+   +VL  + FYAE GGQ+ D+G++
Sbjct: 463 ---EFVGYDYLQSQSRIIKYRQIKDK------KGDRYQLVLDRTPFYAESGGQVGDQGWL 513

Query: 592 EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVI--CKVDYDRRKLIAPNHTCTH 649
           +       V + +     ++H         R     +V+   +V+  +R+L   NH+ TH
Sbjct: 514 QSEGERIQVLDTKKENDLIVHF------VDRLPADPKVVFAAQVNEQKRRLTMSNHSATH 567

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +L+ ALR+VLG HV QKGS+V  + LRFDFSH   +  E L  +E IVN +I+  + +  
Sbjct: 568 LLHAALRQVLGGHVQQKGSLVNEDVLRFDFSHFAKMTEEELTEVEQIVNTKIRENIALGE 627

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
           +     E     G  A+FGE Y D VRV+   R                 S ELCGGTH+
Sbjct: 628 QRNVPIEDAKKQGATALFGEKYGDFVRVITFDR---------------HFSVELCGGTHV 672

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK--------I 821
             T     F ++SE  I+ G+RRI A+T   A        +L KE+ D  K        +
Sbjct: 673 PATGNIGLFKIVSEGSISAGVRRIEAITAKSAESYVNGQLALIKELQDLLKNPKDLKKSL 732

Query: 822 EGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAA-ASNGKPFCISRVEV 871
           EG L E+N+++   K++   +L++A  + T+  E A A NG    I +V++
Sbjct: 733 EGLLHERNELK---KEIEALHLKEAASLKTKLMEKAIAMNGMNLIIEQVQL 780


>gi|387791242|ref|YP_006256307.1| alanine--tRNA ligase [Solitalea canadensis DSM 3403]
 gi|379654075|gb|AFD07131.1| alanine--tRNA ligase [Solitalea canadensis DSM 3403]
          Length = 869

 Score =  643 bits (1658), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/878 (41%), Positives = 506/878 (57%), Gaps = 71/878 (8%)

Query: 63  VRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRA 122
           +R  F  FFE K H    S+P+V  NDPTL+F N+GM  +K IFLG +       K  R 
Sbjct: 6   IRKAFLDFFESKGHKIVPSAPLVVKNDPTLMFVNSGMAPFKDIFLGVSP-----VKFPRV 60

Query: 123 CNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLP 182
            +TQKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI+WAWELLT+VY+LP
Sbjct: 61  ADTQKCLRVSGKHNDLEEVGIDTYHHTLFEMLGNWSFGDYFKKEAIQWAWELLTEVYKLP 120

Query: 183 ADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPCSEI 242
            DRLY T F GD K  LAPDNEA +IW K++ A R+L    KDNFWEMGD GPCGPCSEI
Sbjct: 121 KDRLYVTVFEGDAKENLAPDNEALEIWKKYIAADRILYGNKKDNFWEMGDQGPCGPCSEI 180

Query: 243 HYD-----RTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFE 297
           H D         +D   LVNND P  +EIWN VF++FNR++DGSL+ LPA+HVDTG+GFE
Sbjct: 181 HIDLRSEEERAQKDGKELVNNDHPQVVEIWNNVFMEFNRKADGSLEKLPAQHVDTGMGFE 240

Query: 298 RLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTL 357
           RL   LQ K SNYDTDVF P+   I    G     GKV     +K D+A RV+ADHIR +
Sbjct: 241 RLCMALQQKRSNYDTDVFQPMIQFIASQCGIA--YGKV-----EKTDIAMRVMADHIRAI 293

Query: 358 SFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELK 417
           +F I DG  P N G  YV+RRILRRAVRY    L  ++ F   LV ++ +    VF ELK
Sbjct: 294 AFTITDGQLPSNTGAGYVIRRILRRAVRYSYTFLNFKEPFLYKLVALLAEQFDGVFNELK 353

Query: 418 QREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQ 477
           ++++ + +++  EEASF +TL  GI++F+K   D   K + G+ AF L+DTYGFP+DLTQ
Sbjct: 354 EQKSFVEKVVKEEEASFLRTLAGGIQRFEKYIAD--HKEIEGEFAFELYDTYGFPIDLTQ 411

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSF 537
           L+A E  L VD++GFN A++  + RSR+A     G  +++  D          L T+   
Sbjct: 412 LLARESKLNVDMDGFNKALEAQKNRSRAATAIDTGDWVLVSEDKETEFLGYDQLETE--V 469

Query: 538 KFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFGS 597
             + ++  K+  K  Y                +VL  + FYAE GGQ+ D G +E     
Sbjct: 470 HILKYRKIKAKGKEQYQ---------------LVLDKTPFYAEGGGQVGDTGVLENANEL 514

Query: 598 FYVRNVQIYGGFVIHI-GSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALR 656
             + + +     ++H    L E      + +  + KVD D+R+  A NH+ TH+L+ AL+
Sbjct: 515 VRINDTKKENNLIVHFTDELPE-----DLTKAFVAKVDTDKRRDTANNHSATHLLHAALK 569

Query: 657 EVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAE 716
            VLGDHV+QKGS+V  E LRFDFSH   V  E +  IE IVNE+I+  + +  +     +
Sbjct: 570 RVLGDHVNQKGSLVNEEYLRFDFSHFAKVTDEEIAAIEKIVNEKIRENIKLDEQRKVPFQ 629

Query: 717 AKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAE 776
               +G+ A+FGE Y D VRV+           DP      S S ELCGG H+  T +  
Sbjct: 630 QAIDSGVTALFGEKYGDFVRVITF---------DP------SYSKELCGGIHVPATGQIG 674

Query: 777 AFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV--------DDASKIEGSLLEK 828
           +F +++E  +A G+RRI A+T   A + +    ++  EV        D    +E  L E 
Sbjct: 675 SFKIVAESAVAAGVRRIEAITATKAEELYNQQQAIVNEVKTLLKNPKDVVKGLENVLEEN 734

Query: 829 NQVRKAQKKVAEENLQKAVKVATETAEAAAS-NGKPFCISRVEVGLDAAAVREAVLKVIE 887
           N++RK  +++    +QKA  +  +  + A S NG  F  +RV++   A A++    ++ E
Sbjct: 735 NRLRKELEQMI---IQKASMLKDDLVKKAESINGVNFIATRVDIP-SAEAIKNLSFEMRE 790

Query: 888 QKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSE 925
           +     +V +  E   K  +   + +   Q K+L  S+
Sbjct: 791 KLNDLFLVIAA-EIDGKPSISVIISDSLVQDKKLNASQ 827


>gi|334323954|ref|XP_001367753.2| PREDICTED: alanyl-tRNA synthetase, mitochondrial [Monodelphis
           domestica]
          Length = 989

 Score =  642 bits (1657), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/900 (41%), Positives = 516/900 (57%), Gaps = 73/900 (8%)

Query: 60  ATKVRDTFFKFFEDKN-HVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSK 118
           A+ +R  F  FF D++ H    S+ V+P +DP LLF NAGMNQ+KPIFLGT DP +++++
Sbjct: 45  ASVIRTAFLHFFRDRHGHQLVPSASVMPRSDPGLLFVNAGMNQFKPIFLGTVDPRSEMAR 104

Query: 119 LTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFG-DYFKNEAIEWAWELLTK 177
             R  N+QKC+R GG+HNDL+DVG+D  HHTFFEMLGNW+FG +YFK EA   AWELLT 
Sbjct: 105 FRRVANSQKCVRTGGRHNDLEDVGRDLSHHTFFEMLGNWAFGGEYFKEEACSMAWELLTH 164

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPC 236
           +Y +P DRL+ TYFGG+   GLAPD E+RDIWL   +P+SRVL FG  +NFWEMG+ GPC
Sbjct: 165 IYEIPQDRLWVTYFGGNPPEGLAPDYESRDIWLSLGVPSSRVLSFGPSENFWEMGEIGPC 224

Query: 237 GPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGF 296
           GPC+EIHYD +G            P  +E+WN+VF+Q+NRE+DGSL+ LP +HVDTG+G 
Sbjct: 225 GPCTEIHYDLSGGVGP--------PQLVELWNLVFMQYNREADGSLQLLPQRHVDTGMGL 276

Query: 297 ERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRT 356
           ERL ++LQNK S YDTD+F P+  AIQQ   A PY G+VG  D    DMAYRVVADHIRT
Sbjct: 277 ERLVAVLQNKRSTYDTDLFSPLLTAIQQGCRAPPYQGQVGKADGGHTDMAYRVVADHIRT 336

Query: 357 LSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPEL 416
           LS  +ADG  PG  G   VLR+ILRRA+R+ SEVL+A  GF + LV IVV+ +GD +PEL
Sbjct: 337 LSICMADGVYPGMSGASLVLRQILRRAIRFSSEVLQAPPGFLSSLVPIVVETLGDAYPEL 396

Query: 417 KQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDTYGFPLDL 475
           ++    I  ++A EE +F  +L +G     +  Q +    +   + A+ L    G PLDL
Sbjct: 397 QKNTTQITSLVAEEETAFLSSLERGRRVIDRTLQQLGPSHLFPAEVAWSLSGNLGLPLDL 456

Query: 476 TQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDD 535
             LM EE+G+ +D  G      E  +             + +D  A + L ++GV  TDD
Sbjct: 457 VGLMLEEKGVQLDSAGLEQLAQEEAQHQAQQAKPAKKAELRLDIHALSQLQRQGVPPTDD 516

Query: 536 SFKFIW---------FQDHKSVIKAIYT-GSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
           S K+ +         F   ++ I  +YT      +SV  G   G++L  ++FYAEQGGQ 
Sbjct: 517 SSKYNYSLLPNGSYEFGACEAEIIQLYTLDGAATDSVGGGQRCGLLLDKTNFYAEQGGQA 576

Query: 586 FDEGFI-----EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
            D G++     + +   F V   QIYGGF++H     E      VG++V   VD + R  
Sbjct: 577 CDRGYLICKGQQDVL--FPVIGAQIYGGFILHEVIALE---TLKVGDQVQLHVDEEWRLG 631

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
               HT TH+L++ALR+ LG +  Q GS + PE+LRFD +   P+  E L+ +E  +   
Sbjct: 632 CMKKHTATHLLSWALRQELGPNTQQCGSHLSPERLRFDVATLAPLTSEQLQAVEETIRVA 691

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           +  +  V+  E  L     I GLR+   EVYPDPVRVV++G  V   LA P ++  L  S
Sbjct: 692 VGQDKPVYMAEVALELTTQIPGLRS-LDEVYPDPVRVVSVGVPVAIALA-PTSQAALQTS 749

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK 820
            ELC GTHL  T       ++ E+ ++KGI R+ AVT   A +A +   +L +EV+ AS 
Sbjct: 750 VELCCGTHLLRTGAIGDLTIVGEKPLSKGIVRLVAVTGEQAQQARDVGQNLAQEVEAASA 809

Query: 821 I--EGS--LLEKNQVRKAQKKVAE------------ENLQKAVKVATETAEAAASNGKPF 864
              +GS  ++E   + KA  ++++              LQ  +K     A  A       
Sbjct: 810 RLHQGSQNVVEAQHLSKAVGRLSDTVDTAVMPQWQRRELQAILKRLQRRANTA------- 862

Query: 865 CISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAV---------VCAGVPEKS 915
            I ++E+GL  A  RE + K       PV  F  D    +++         +C  VP  S
Sbjct: 863 -IRKLEIGLATAKSREILEK------HPVGPFIVDTVPTESLSLLVKVVKQLCEQVPGAS 915


>gi|281345697|gb|EFB21281.1| hypothetical protein PANDA_002397 [Ailuropoda melanoleuca]
          Length = 974

 Score =  641 bits (1654), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 398/961 (41%), Positives = 548/961 (57%), Gaps = 84/961 (8%)

Query: 49  PGADPQVVEWPATK---VRDTFFKFFEDKN-HVNWKSSPVVPVNDPTLLFANAGMNQYKP 104
           P   P   E PA +   VRD F  FF D++ H    S+ V P  DP+LLF NAGMNQ+KP
Sbjct: 25  PSRRPLSSEPPAAQARAVRDAFLNFFRDRHGHRLVPSASVRPRGDPSLLFVNAGMNQFKP 84

Query: 105 IFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFG-DYF 163
           IFLGT +P ++++   R  N+QKC+RAGG+H+DL+DVG+D  HHTFFEMLGNW+FG +YF
Sbjct: 85  IFLGTVNPRSEMAGFRRVANSQKCVRAGGRHSDLEDVGRDLSHHTFFEMLGNWAFGGEYF 144

Query: 164 KNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFG 222
           K EA   AWELLT+VY +P DRL+ +YFGGD KAGL PD E+RDIWL   +  S VL FG
Sbjct: 145 KEEACSMAWELLTQVYGIPEDRLWVSYFGGDPKAGLDPDLESRDIWLSLGVRDSHVLSFG 204

Query: 223 CKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSL 282
            ++NFWEMGDTGPCGPC+EIHYD  G   A        P  +E+WN+VFIQ NRE+DGSL
Sbjct: 205 PEENFWEMGDTGPCGPCTEIHYDLAGRVGA--------PQLVELWNLVFIQHNREADGSL 256

Query: 283 KPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADK 342
           +PLP +HVDTG+G ERL ++LQ   S YDTD+F P+  AI Q   A PY G+VGA D  +
Sbjct: 257 QPLPQRHVDTGMGLERLVAVLQGTRSTYDTDLFSPLLKAIHQGCRAPPYLGRVGAADEGR 316

Query: 343 VDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLV 402
            DMAYRVVADHIRTLS  IADG  PG  G   VLRRILRRAVR+ +EVL+A  GF   LV
Sbjct: 317 TDMAYRVVADHIRTLSVCIADGVYPGMSGAPLVLRRILRRAVRFSTEVLRAPPGFLGSLV 376

Query: 403 NIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQD- 461
            +VV+ +GD +PEL++  A I  +++ +EA+F  +L +G +   +  + +    L   + 
Sbjct: 377 PVVVETLGDAYPELQKNSAQIAHLVSEDEAAFLASLQRGRQIIDRTLRRLGPSELFPAEV 436

Query: 462 --AFILWDTYGFPLDLTQLMAEERGLLVDIEGFNN-AMDEARERSRSAQNKQAGGAIVMD 518
             +  L    G PLDL +LM EE+G+ +D  G    A +EA+ RS+ ++  Q  G + ++
Sbjct: 437 AWSLSLAGNLGLPLDLLELMLEEKGVQLDSAGLARLAQEEAQHRSQQSEPVQEQG-LQLN 495

Query: 519 ADATAALHKRGVLATDDSFKFIW---------FQDHKSVIKAIYT-GSEFIESVVPGNEV 568
             A   L +RGV  TDDS K+ +         F   ++ +  +YT     + SV  G   
Sbjct: 496 VHALGELQRRGVPPTDDSPKYNYSLRPSGGYEFSACEAQVLQLYTEDGTAVASVGKGQRC 555

Query: 569 GIVLASSSFYAEQGGQIFDEGFIEGLFGS---FYVRNVQIYGGFVIHIGSLTEGAGRFSV 625
           G++L  ++FYAEQGGQ  D G++  +      F V   Q+ GGF++H     EG     V
Sbjct: 556 GLLLDKTNFYAEQGGQASDRGYLVRVGQEDVLFPVAQAQVCGGFILHEAVAPEG---LKV 612

Query: 626 GEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPV 685
           G++V   VD   R      HT TH+L++ALR+ LG H +Q+GS + PE+LRFD +   P+
Sbjct: 613 GDQVQLHVDEAWRLRCMEKHTATHLLSWALRQTLGPHTEQRGSHLSPERLRFDVATQAPL 672

Query: 686 DPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVE 745
            PE LR +E  V + +  +  V+ ++  LA    + GLR+   EVYPDPVRVV++G  V 
Sbjct: 673 TPEQLRAVEGTVQDAVGQDEPVYMEDVALALTAHVPGLRS-LDEVYPDPVRVVSVGVPVA 731

Query: 746 DLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAF 805
             L DP ++  L  S ELC GTHL  T       ++ E  + KG  R+ AVT   A +A 
Sbjct: 732 RAL-DPASQAALRTSVELCCGTHLLRTGAVGDLVIVGERQLTKGTTRLLAVTGEQAQQAR 790

Query: 806 EAACSLEKEVDDASK-------------------------IEGSLLEKNQVRKAQKKVAE 840
           E   +L +EV+ A++                         ++ +L+ + Q R+ Q   A 
Sbjct: 791 EVGQNLAQEVEAATERLSRGSQDVAAAQRLSKDVGRLTDAVDTALMPQWQRRELQ--AAL 848

Query: 841 ENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAV---REAVLKVIEQ-----KGMP 892
           + LQ+    A    E   + G P      E G  AA V    + ++KV+ Q      G  
Sbjct: 849 KALQRRANAAIRKLELGQAAGNP------ERG--AATVCPPSQVLVKVVRQLCERAPGTS 900

Query: 893 VMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTD 952
           V++ S     +  V+CA    +S  +       W  A   P+ G+   G   +A G GT 
Sbjct: 901 VLLLSPQPRGH--VLCACQVAQS-ATPAFTAEAWALAVCSPMGGK-AWGSRVVAQGTGTT 956

Query: 953 A 953
           A
Sbjct: 957 A 957


>gi|301757306|ref|XP_002914501.1| PREDICTED: LOW QUALITY PROTEIN: probable alanyl-tRNA synthetase,
           mitochondrial-like [Ailuropoda melanoleuca]
          Length = 984

 Score =  640 bits (1650), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 370/832 (44%), Positives = 502/832 (60%), Gaps = 45/832 (5%)

Query: 49  PGADPQVVEWPATK---VRDTFFKFFEDKN-HVNWKSSPVVPVNDPTLLFANAGMNQYKP 104
           P   P   E PA +   VRD F  FF D++ H    S+ V P  DP+LLF NAGMNQ+KP
Sbjct: 25  PSRRPLSSEPPAAQARAVRDAFLNFFRDRHGHRLVPSASVRPRGDPSLLFVNAGMNQFKP 84

Query: 105 IFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFG-DYF 163
           IFLGT +P ++++   R  N+QKC+RAGG+H+DL+DVG+D  HHTFFEMLGNW+FG +YF
Sbjct: 85  IFLGTVNPRSEMAGFRRVANSQKCVRAGGRHSDLEDVGRDLSHHTFFEMLGNWAFGGEYF 144

Query: 164 KNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFG 222
           K EA   AWELLT+VY +P DRL+ +YFGGD KAGL PD E+RDIWL   +  S VL FG
Sbjct: 145 KEEACSMAWELLTQVYGIPEDRLWVSYFGGDPKAGLDPDLESRDIWLSLGVRDSHVLSFG 204

Query: 223 CKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSL 282
            ++NFWEMGDTGPCGPC+EIHYD  G   A        P  +E+WN+VFIQ NRE+DGSL
Sbjct: 205 PEENFWEMGDTGPCGPCTEIHYDLAGRVGA--------PQLVELWNLVFIQHNREADGSL 256

Query: 283 KPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADK 342
           +PLP +HVDTG+G ERL ++LQ   S YDTD+F P+  AI Q   A PY G+VGA D  +
Sbjct: 257 QPLPQRHVDTGMGLERLVAVLQGTRSTYDTDLFSPLLKAIHQGCRAPPYLGRVGAADEGR 316

Query: 343 VDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLV 402
            DMAYRVVADHIRTLS  IADG  PG  G   VLRRILRRAVR+ +EVL+A  GF   LV
Sbjct: 317 TDMAYRVVADHIRTLSVCIADGVYPGMSGAPLVLRRILRRAVRFSTEVLRAPPGFLGSLV 376

Query: 403 NIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQD- 461
            +VV+ +GD +PEL++  A I  +++ +EA+F  +L +G +   +  + +    L   + 
Sbjct: 377 PVVVETLGDAYPELQKNSAQIAHLVSEDEAAFLASLQRGRQIIDRTLRRLGPSELFPAEV 436

Query: 462 --AFILWDTYGFPLDLTQLMAEERGLLVDIEGFNN-AMDEARERSRSAQNKQAGGAIVMD 518
             +  L    G PLDL +LM EE+G+ +D  G    A +EA+ RS+ ++  Q  G + ++
Sbjct: 437 AWSLSLAGNLGLPLDLLELMLEEKGVQLDSAGLARLAQEEAQHRSQQSEPVQEQG-LQLN 495

Query: 519 ADATAALHKRGVLATDDSFKFIW---------FQDHKSVIKAIYT-GSEFIESVVPGNEV 568
             A   L +RGV  TDDS K+ +         F   ++ +  +YT     + SV  G   
Sbjct: 496 VHALGELQRRGVPPTDDSPKYNYSLRPSGGYEFSACEAQVLQLYTEDGTAVASVGKGQRC 555

Query: 569 GIVLASSSFYAEQGGQIFDEGFIEGLFGS---FYVRNVQIYGGFVIHIGSLTEGAGRFSV 625
           G++L  ++FYAEQGGQ  D G++  +      F V   Q+ GGF++H     EG     V
Sbjct: 556 GLLLDKTNFYAEQGGQASDRGYLVRVGQEDVLFPVAQAQVCGGFILHEAVAPEG---LKV 612

Query: 626 GEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPV 685
           G++V   VD   R      HT TH+L++ALR+ LG H +Q+GS + PE+LRFD +   P+
Sbjct: 613 GDQVQLHVDEAWRLRCMEKHTATHLLSWALRQTLGPHTEQRGSHLSPERLRFDVATQAPL 672

Query: 686 DPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVE 745
            PE LR +E  V + +  +  V+ ++  LA    + GLR+   EVYPDPVRVV++G  V 
Sbjct: 673 TPEQLRAVEGTVQDAVGQDEPVYMEDVALALTAHVPGLRS-LDEVYPDPVRVVSVGVPVA 731

Query: 746 DLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAF 805
             L DP ++  L  S ELC GTHL  T       ++ E  + KG  R+ AVT   A +A 
Sbjct: 732 RAL-DPASQAALRTSVELCCGTHLLRTGAVGDLVIVGERQLTKGTTRLLAVTGEQAQQAR 790

Query: 806 EAACSLEKEVDDASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAA 857
           E   +L +EV+ A+        +   R +Q   A + L K V   T+  + A
Sbjct: 791 EVGQNLAQEVEAAT--------ERLSRGSQDVAAAQRLSKDVGRLTDAVDTA 834


>gi|402867121|ref|XP_003897716.1| PREDICTED: alanine--tRNA ligase, mitochondrial [Papio anubis]
          Length = 985

 Score =  639 bits (1649), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 348/779 (44%), Positives = 473/779 (60%), Gaps = 44/779 (5%)

Query: 67  FFKFFEDKN-HVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRACNT 125
           F  FF D++ H    S+ V P  DP+LLF NAGMNQ+KPIFLGT DP ++++   R  N+
Sbjct: 46  FLNFFRDRHGHRLVPSASVRPRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRRVANS 105

Query: 126 QKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFG-DYFKNEAIEWAWELLTKVYRLPAD 184
           QKC+RAGG+HNDL+DVG+D  HHTFFEMLGNW+FG +YFK EA   AWELLT+VY +P +
Sbjct: 106 QKCVRAGGRHNDLEDVGRDLSHHTFFEMLGNWAFGGEYFKEEACSMAWELLTQVYGIPTE 165

Query: 185 RLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGPCSEIH 243
           RL+ +YF GD KAGL PD E RDIWL   +PA+RVL FG ++NFWEMG+TGPCGPC+EIH
Sbjct: 166 RLWVSYFDGDPKAGLEPDLETRDIWLSLGVPATRVLSFGPQENFWEMGNTGPCGPCTEIH 225

Query: 244 YDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSIL 303
           YD  G   A        P  +E+WN+VF+Q NRE+DGSL+PLP  HVDTG+G ERL ++L
Sbjct: 226 YDLAGGVGA--------PQLVELWNLVFMQHNREADGSLQPLPQWHVDTGMGLERLVAVL 277

Query: 304 QNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIAD 363
           Q K S YDTD+F P+  AIQQ   A PY G+VG  D  + D AYRVVADHIRTLS  I+D
Sbjct: 278 QGKHSTYDTDLFSPLLHAIQQGCRAPPYLGRVGVADEGRTDTAYRVVADHIRTLSVCISD 337

Query: 364 GSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHI 423
           G  PG  G   VLRRILRRAVR+  E+LKA  GF   LV +VV+ +GD +PEL++  A I
Sbjct: 338 GVFPGMSGPPLVLRRILRRAVRFSMEILKAPPGFLGSLVPVVVETLGDAYPELQRNSAQI 397

Query: 424 REIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAF---ILWDT-----YGFPLDL 475
             ++  +EA+F  +L +G     +       + L   D F   + W        G PLD+
Sbjct: 398 SNLVLEDEAAFLASLERGRRIIDRTL-----RTLGPSDMFPAEVAWSLSLSGDLGLPLDM 452

Query: 476 TQLMAEERGLLVDIEGFNN-AMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATD 534
            +LM EE+G+ +D  G    A + A+ ++R A+  Q  G + +D  A   L ++GV  TD
Sbjct: 453 VELMLEEKGVQLDSTGLERLAQEAAQHQARQAKPVQKQG-LWLDVHALGELQRQGVPPTD 511

Query: 535 DSFKFIW---------FQDHKSVIKAIYT-GSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
            S K+ +         F   ++ +  +YT     + SV  G   G++L  ++FYAEQGGQ
Sbjct: 512 SSPKYNYSLRPNGSYEFGTCEAQVLQLYTEDGTAVASVGKGQRCGLLLDRTNFYAEQGGQ 571

Query: 585 IFDEGFIEGLFGS---FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLI 641
             D G++  +      F V   Q+ GGF++H     E      +G++V   VD   R   
Sbjct: 572 ASDRGYLVRVGQEDVLFPVARAQVCGGFILHEAVAPEC---LQIGDQVQLHVDKAWRLAC 628

Query: 642 APNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQI 701
              HT TH+LN+ALR+ LG   +Q+GS + PE+LR D +    + PE LR +E+ V E +
Sbjct: 629 MAKHTATHLLNWALRQTLGPGTEQQGSHLNPEQLRLDVTTQTALTPEQLRAVENTVQEAV 688

Query: 702 KAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISA 761
           + +  V+ +E  LA    + GLR    EVYPDPVRVV++G  V   L DP ++  L  S 
Sbjct: 689 QQDKPVYMEEVPLALTAQVPGLRC-LDEVYPDPVRVVSVGVPVAHAL-DPASQAALQTSV 746

Query: 762 ELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK 820
           ELC GTHL  T       ++ +  ++KG  R+ A+T   A +A E   +L +EV  A++
Sbjct: 747 ELCCGTHLLRTGAVGDLVIIGDRQLSKGTTRLLAITGEQAQQARELGQNLAQEVKAATE 805


>gi|378755135|gb|EHY65162.1| alanyl-tRNA synthetase [Nematocida sp. 1 ERTm2]
          Length = 946

 Score =  639 bits (1647), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 350/792 (44%), Positives = 478/792 (60%), Gaps = 75/792 (9%)

Query: 58  WPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLS 117
           W A K+R+ F ++FE + H +W+SS V P +DPTLLF N+GM Q+K  FL  A  +T   
Sbjct: 2   WTANKLRNAFTEYFEKEGHTHWRSSSVNP-DDPTLLFTNSGMVQFKKKFLDLAPADTAYG 60

Query: 118 KLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTK 177
           ++ RACN QKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFK EAI +AW  LT+
Sbjct: 61  QMKRACNYQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAIHFAWTFLTE 120

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCG 237
           V +L  DR+Y +YF GD   GL  D E++++W ++LP SR+L FG K+NFWEMG  GPCG
Sbjct: 121 VLKLDKDRIYVSYFNGDPSQGLPCDTESQELWRQYLPDSRILGFGAKENFWEMGLVGPCG 180

Query: 238 PCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFE 297
           PCSEIHYDR G RDA+ +VN DDP  +EIWN+VFIQ+NRE  G L  LP KH+DTG+G E
Sbjct: 181 PCSEIHYDRIGGRDASGIVNQDDPDVLEIWNVVFIQYNREESG-LSVLPKKHIDTGMGLE 239

Query: 298 RLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTL 357
           R+ SILQN+ SNY+TD+F+P+F  I++  G  PY+ ++ +    K D+AYRV+ADH RTL
Sbjct: 240 RVLSILQNEKSNYNTDLFVPLFKTIERVLGVEPYTDRLDS----KKDIAYRVIADHSRTL 295

Query: 358 SFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELK 417
           + ++ D   P ++G+ Y +R+ILRRA+ +    LK   G    L     +V GD F ++ 
Sbjct: 296 TISLMDNVMPSSDGKGYTIRKILRRALGFQYLHLKKAPGLLPILAE---QVFGD-FSQVY 351

Query: 418 QREAH---IREIIAAEEASFGKTLLKGIE------KFKKAAQDVQGKVLSGQDAFILWDT 468
           Q E     I +II  EEA F KTL KG+       +  K  +D   KVL G  AF+L+D 
Sbjct: 352 QTELSAQAIVQIITEEEAQFTKTLSKGLSILMDMLETAKNVEDGAKKVLPGASAFVLYDR 411

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQ-NKQAGGAIVMDADAT-AALH 526
           YGFP+DLT  +AE+ G+ VD++GF  A   A+  S+  Q + ++    V D DA   AL 
Sbjct: 412 YGFPIDLTMAVAEQEGVAVDVDGFKEAQAAAKALSKGTQKSTESLHLTVHDLDALDKALK 471

Query: 527 KRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFI-----ESVVPGNEVGIVLASSSFYAEQ 581
           KR    T D +K+         + A+    E +     E+  P  E G++L  +SFY+E 
Sbjct: 472 KR---PTVDRYKYSEEPISARTV-AVKQAGEIVSVSELENPAPAGEFGVILDQTSFYSEA 527

Query: 582 GGQIFDEGFI-----------------------------EG-LFGSFYVRNVQIYGGFVI 611
           GGQ  D G I                             EG + G F VR+ + YG +V+
Sbjct: 528 GGQEGDAGTIIFTHKTAKDAGDLVRMFSGLTVKNTKTPKEGNISGIFTVRDTKNYGRYVM 587

Query: 612 HIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVL----GDHVDQKG 667
           HIG+L EG    S+ E  +C +D  RR+ +A  HT TH+LN+AL + L    G+ + Q G
Sbjct: 588 HIGTL-EG----SITESAVCTIDVGRRRRLAHAHTGTHLLNYALSQTLSKAGGEEIRQCG 642

Query: 668 SVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVF 727
           S+V  + LRFDF +  P+    +  +E I+N  ++ +  V  +      A  I G+R + 
Sbjct: 643 SLVSEDLLRFDFHYNAPLSKAEISAVEEIINSIVERKEAVTVEYLPYTSAVRIEGIRHMK 702

Query: 728 GEVYPDPVRVVAIGRKVEDLLADPENKEWLSI-SAELCGGTHLSNTREAEAFALLSEEGI 786
            E YP+ VRVV++   +     D  N    +I SAELCGGTH+ NT +   F ++ E  I
Sbjct: 703 DEEYPETVRVVSVKNTL-----DKSNARTSTITSAELCGGTHVENTGDIGRFRIVGESSI 757

Query: 787 AKGIRRITAVTT 798
           ++GIRRITAV +
Sbjct: 758 SRGIRRITAVCS 769


>gi|355561749|gb|EHH18381.1| hypothetical protein EGK_14961 [Macaca mulatta]
 gi|380790281|gb|AFE67016.1| alanine--tRNA ligase, mitochondrial [Macaca mulatta]
 gi|380790283|gb|AFE67017.1| alanine--tRNA ligase, mitochondrial [Macaca mulatta]
 gi|380790285|gb|AFE67018.1| alanine--tRNA ligase, mitochondrial [Macaca mulatta]
 gi|380790287|gb|AFE67019.1| alanine--tRNA ligase, mitochondrial [Macaca mulatta]
 gi|380790289|gb|AFE67020.1| alanine--tRNA ligase, mitochondrial [Macaca mulatta]
          Length = 985

 Score =  638 bits (1645), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 348/779 (44%), Positives = 472/779 (60%), Gaps = 44/779 (5%)

Query: 67  FFKFFEDKN-HVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRACNT 125
           F  FF D++ H    S+ V P  DP+LLF NAGMNQ+KPIFLGT DP ++++   R  N+
Sbjct: 46  FLNFFRDRHGHRLVPSASVRPRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRRVANS 105

Query: 126 QKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFG-DYFKNEAIEWAWELLTKVYRLPAD 184
           QKC+RAGG+HNDL+DVG+D  HHTFFEMLGNW+FG +YFK EA   AWELLT+VY +P +
Sbjct: 106 QKCVRAGGRHNDLEDVGRDLSHHTFFEMLGNWAFGGEYFKEEACSMAWELLTQVYGIPTE 165

Query: 185 RLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGPCSEIH 243
           RL+ +YF GD KAGL PD E RDIWL   +PA+RVL FG ++NFWEMG+TGPCGPC+EIH
Sbjct: 166 RLWVSYFDGDPKAGLEPDLETRDIWLSLGVPATRVLSFGPQENFWEMGNTGPCGPCTEIH 225

Query: 244 YDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSIL 303
           YD  G   A        P  +E+WN+VF+Q NRE+DGSL+PLP  HVDTG+G ERL ++L
Sbjct: 226 YDLAGGVGA--------PQLVELWNLVFMQHNREADGSLQPLPQWHVDTGMGLERLVAVL 277

Query: 304 QNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIAD 363
           Q K S YDTD+F P+  AIQQ   A PY G+VG  D  + D AYRVVADHIRTLS  I+D
Sbjct: 278 QGKHSTYDTDLFSPLLHAIQQGCRAPPYLGRVGVADEGRTDTAYRVVADHIRTLSVCISD 337

Query: 364 GSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHI 423
           G  PG  G   VLRRILRRAVR+  E+LKA  GF   LV +VV+ +GD +PEL++  A I
Sbjct: 338 GVFPGMSGPPLVLRRILRRAVRFSMEILKAPPGFLGSLVPVVVETLGDAYPELQRNSAQI 397

Query: 424 REIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAF---ILWDT-----YGFPLDL 475
             ++  +EA+F  +L +G     +       + L   D F   + W        G PLD+
Sbjct: 398 SNLVLEDEAAFLASLERGRRIIDRTL-----RTLGPSDMFPAEVAWSLSLSGDLGLPLDM 452

Query: 476 TQLMAEERGLLVDIEGFNN-AMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATD 534
            +LM EE+G+ +D  G    A + A+ ++R A+  Q  G + +D  A   L  +GV  TD
Sbjct: 453 VELMLEEKGVQLDSTGLERLAQEAAQHQARQAEPVQKQG-LWLDVHALGELQHQGVPPTD 511

Query: 535 DSFKFIW---------FQDHKSVIKAIYT-GSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
            S K+ +         F   ++ +  +YT     + SV  G   G++L  ++FYAEQGGQ
Sbjct: 512 SSPKYNYSLRPNGSYEFGTCEAQVLQLYTEDGTAVASVGKGQRCGLLLDRTNFYAEQGGQ 571

Query: 585 IFDEGFIEGLFGS---FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLI 641
             D G++  +      F V   Q+ GGF++H     E      +G++V   VD   R   
Sbjct: 572 ASDRGYLVRVGQEDVLFPVARAQVCGGFILHEAVAPEC---LQIGDQVQLHVDKAWRLAC 628

Query: 642 APNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQI 701
              HT TH+LN+ALR+ LG   +Q+GS + PE+LR D +    + PE LR +E+ V E +
Sbjct: 629 MAKHTATHLLNWALRQTLGPGTEQQGSHLNPEQLRLDVTTQTALTPERLRAVENTVQEAV 688

Query: 702 KAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISA 761
           + +  V+ +E  LA    + GLR    EVYPDPVRVV++G  V   L DP ++  L  S 
Sbjct: 689 QQDKPVYMEEVPLALTAQVPGLRC-LDEVYPDPVRVVSVGVPVAHAL-DPASQAALQTSV 746

Query: 762 ELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK 820
           ELC GTHL  T       ++ +  ++KG  R+ A+T   A +A E   +L +EV  A++
Sbjct: 747 ELCCGTHLLRTGAVGDLVIIGDRQLSKGTTRLLAITGEQAQQARELGQNLAQEVKAATE 805


>gi|109071333|ref|XP_001099647.1| PREDICTED: probable alanyl-tRNA synthetase, mitochondrial [Macaca
           mulatta]
          Length = 985

 Score =  638 bits (1645), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 348/779 (44%), Positives = 472/779 (60%), Gaps = 44/779 (5%)

Query: 67  FFKFFEDKN-HVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRACNT 125
           F  FF D++ H    S+ V P  DP+LLF NAGMNQ+KPIFLGT DP ++++   R  N+
Sbjct: 46  FLNFFRDRHGHRLVPSASVRPRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRRVANS 105

Query: 126 QKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFG-DYFKNEAIEWAWELLTKVYRLPAD 184
           QKC+RAGG+HNDL+DVG+D  HHTFFEMLGNW+FG +YFK EA   AWELLT+VY +P +
Sbjct: 106 QKCVRAGGRHNDLEDVGRDLSHHTFFEMLGNWAFGGEYFKEEACSMAWELLTQVYGIPTE 165

Query: 185 RLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGPCSEIH 243
           RL+ +YF GD KAGL PD E RDIWL   +PA+RVL FG ++NFWEMG+TGPCGPC+EIH
Sbjct: 166 RLWVSYFDGDPKAGLEPDLETRDIWLSLGVPATRVLSFGPQENFWEMGNTGPCGPCTEIH 225

Query: 244 YDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSIL 303
           YD  G   A        P  +E+WN+VF+Q NRE+DGSL+PLP  HVDTG+G ERL ++L
Sbjct: 226 YDLAGGVGA--------PQLVELWNLVFMQHNREADGSLQPLPQWHVDTGMGLERLVAVL 277

Query: 304 QNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIAD 363
           Q K S YDTD+F P+  AIQQ   A PY G+VG  D  + D AYRVVADHIRTLS  I+D
Sbjct: 278 QGKHSTYDTDLFSPLLHAIQQGCRAPPYLGRVGVADEGRTDTAYRVVADHIRTLSVCISD 337

Query: 364 GSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHI 423
           G  PG  G   VLRRILRRAVR+  E+LKA  GF   LV +VV+ +GD +PEL++  A I
Sbjct: 338 GVFPGMSGPPLVLRRILRRAVRFSMEILKAPPGFLGSLVPVVVETLGDAYPELQRNSAQI 397

Query: 424 REIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAF---ILWDT-----YGFPLDL 475
             ++  +EA+F  +L +G     +       + L   D F   + W        G PLD+
Sbjct: 398 SNLVLEDEAAFLASLERGRRIIDRTL-----RTLGPSDMFPAEVAWSLSLSGDLGLPLDM 452

Query: 476 TQLMAEERGLLVDIEGFNN-AMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATD 534
            +LM EE+G+ +D  G    A + A+ ++R A+  Q  G + +D  A   L  +GV  TD
Sbjct: 453 VELMLEEKGVQLDSTGLERLAQEAAQHQARQAEPVQKQG-LWLDVHALGELQHQGVPPTD 511

Query: 535 DSFKFIW---------FQDHKSVIKAIYT-GSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
            S K+ +         F   ++ +  +YT     + SV  G   G++L  ++FYAEQGGQ
Sbjct: 512 SSPKYNYSLRPNGSYEFGTCEAQVLQLYTEDGTAVASVGKGQRCGLLLDRTNFYAEQGGQ 571

Query: 585 IFDEGFIEGLFGS---FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLI 641
             D G++  +      F V   Q+ GGF++H     E      +G++V   VD   R   
Sbjct: 572 ASDRGYLVRVGQEDVLFPVARAQVCGGFILHEAVAPEC---LQIGDQVQLHVDKAWRLAC 628

Query: 642 APNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQI 701
              HT TH+LN+ALR+ LG   +Q+GS + PE+LR D +    + PE LR +E+ V E +
Sbjct: 629 MAKHTATHLLNWALRQTLGPGTEQQGSHLNPEQLRLDVTTQTALTPERLRAVENTVQEAV 688

Query: 702 KAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISA 761
           + +  V+ +E  LA    + GLR    EVYPDPVRVV++G  V   L DP ++  L  S 
Sbjct: 689 QQDKPVYMEEVPLALTAQVPGLRC-LDEVYPDPVRVVSVGVPVAHAL-DPASQAALQTSV 746

Query: 762 ELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK 820
           ELC GTHL  T       ++ +  ++KG  R+ A+T   A +A E   +L +EV  A++
Sbjct: 747 ELCCGTHLLRTGAVGDLVIIGDRQLSKGTTRLLAITGEQAQQARELGQNLAQEVKAATE 805


>gi|311747311|ref|ZP_07721096.1| alanine--tRNA ligase [Algoriphagus sp. PR1]
 gi|311302637|gb|EAZ83190.2| alanine--tRNA ligase [Algoriphagus sp. PR1]
          Length = 874

 Score =  637 bits (1644), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 362/832 (43%), Positives = 487/832 (58%), Gaps = 74/832 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A K+R TF +FF+ K H    SSP+V  NDPTL+F NAGMNQ+K  FLG   P     K 
Sbjct: 3   AKKIRSTFIEFFQSKQHQYVPSSPIVVKNDPTLMFTNAGMNQFKDAFLGNETP-----KF 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  N+QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAIEWAWELLT V+
Sbjct: 58  ARVANSQKCLRVSGKHNDLEEVGVDTYHHTMFEMLGNWSFGDYFKKEAIEWAWELLTVVF 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +LP +RLY + F GD+  GL+ D EA + W K +P  R++    KDNFWEMGDTGPCGPC
Sbjct: 118 KLPKERLYVSVFEGDQGDGLSLDTEAYNFWKKIVPEDRIIMGSKKDNFWEMGDTGPCGPC 177

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + A      LVNND    IEIWN+VF+Q+NR SDGSLK LPAKHVDTG+
Sbjct: 178 SEIHIDLRPEAELAEIPGKDLVNNDHEQVIEIWNLVFMQYNRLSDGSLKELPAKHVDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   +Q K SNYDTD+F P  +AI +       SGKV  +D ++ D+A+RV+ DHI
Sbjct: 238 GFERLVRAIQQKSSNYDTDLFAPFLNAIAKK------SGKVYGND-EQTDIAFRVIVDHI 290

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R +SF IADG  P N    YV+RRILRRAVRYG      Q+ F   L +++ +  GDVFP
Sbjct: 291 RAISFTIADGQLPSNNKAGYVIRRILRRAVRYGYTFFGFQEPFLYELTSLIAEHFGDVFP 350

Query: 415 ELKQREAHIREIIAAEEASFGKTL---LKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGF 471
           E++Q++  I ++I  EEASF +TL   LK +++ K   Q+    V+ G+ AF L+DT+GF
Sbjct: 351 EVRQQQEFISKVIYEEEASFLRTLENGLKILDQIKAELQEKNDTVIPGKTAFELYDTFGF 410

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT L+A E GL +D +GF   M++ + RSR+A   + G  +++  D        GV 
Sbjct: 411 PLDLTSLIARENGLSLDEKGFLAEMEKQKTRSRAASESETGDWVLVHED-------EGV- 462

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
              +   + + +   ++IK      +       G +  +VL  + FYAE GGQ+ D+G++
Sbjct: 463 ---EFIGYDFLESFSNIIKYRVVKEK------KGEKYQVVLDKTPFYAESGGQVGDKGWL 513

Query: 592 EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDR--RKLIAPNHTCTH 649
                   V + +     +IH+        +     EV    + DR  R L   NHT TH
Sbjct: 514 ISDNEKIRVIDTKKENDLIIHL------VDKLPSNPEVKFSAEVDRKGRALSMNNHTATH 567

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +L  AL+EVLGDH+ Q+GS+V P+ LRFDFSH   +  E + ++E IVN +I+  + +  
Sbjct: 568 LLQSALKEVLGDHIQQRGSLVSPDLLRFDFSHFGKLTEEEITKVEEIVNTKIRENIPLVE 627

Query: 710 KE-ATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
           K    + EAK + G  A+FGE Y D VRV+           DP+       S ELCGGTH
Sbjct: 628 KRNVPIEEAKSM-GATALFGEKYGDFVRVITF---------DPD------FSVELCGGTH 671

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK-------- 820
           +  T +   F + SE   A G+RRI A+T   A        +L KE+ +  K        
Sbjct: 672 VPYTSQIGLFKITSEGSSASGVRRIEAITAKAAEDYLRGQENLVKEIQELLKHPKDLKKS 731

Query: 821 IEGSLLEKNQVRKAQKKVAEENLQKAVKVATE-TAEAAASNGKPFCISRVEV 871
           IE  + EKN ++K  + + +E   KA  V  E   E  A  G    I++V++
Sbjct: 732 IEALIQEKNDLKKEIELLYQE---KAGAVKGELLKEFVAGEGINTLIAKVDL 780


>gi|410028193|ref|ZP_11278029.1| alanyl-tRNA ligase [Marinilabilia sp. AK2]
          Length = 877

 Score =  637 bits (1642), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 347/792 (43%), Positives = 464/792 (58%), Gaps = 68/792 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A K+R TF +FF+ K H    SSP+V  NDPTL+F NAGMNQ+K  FLG   P     K 
Sbjct: 3   AKKIRSTFIEFFQSKQHQYVASSPIVVKNDPTLMFTNAGMNQFKDFFLGNDIP-----KF 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           TR  N+QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAIEWAWELLT+VY
Sbjct: 58  TRVANSQKCLRVSGKHNDLEEVGVDTYHHTMFEMLGNWSFGDYFKREAIEWAWELLTEVY 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
            LP DRLY + FGGD    L  D EA DIW   +P +R+L    KDNFWEMGDTGPCGPC
Sbjct: 118 GLPKDRLYVSVFGGDAGDNLEKDTEAFDIWKGIVPENRILFGSKKDNFWEMGDTGPCGPC 177

Query: 240 SEIHYD-RT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D RT       +   LVNND P  IEIWN+VF+QFNR +DGSLK LPAKHVDTG+
Sbjct: 178 SEIHIDLRTEEERNKENGYDLVNNDHPQVIEIWNLVFMQFNRLADGSLKELPAKHVDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   +Q K SNYDTDVFMP   A++  +G + Y    G D  +K D+A RV+ DHI
Sbjct: 238 GFERLVRAIQQKSSNYDTDVFMPFIHAVEMKSG-KSY----GRD--EKTDIAMRVIVDHI 290

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R ++F IADG  P N    YV+RRILRRAVRYG   L  Q  F + L+ ++ +  GD+FP
Sbjct: 291 RAIAFTIADGQLPSNNKAGYVIRRILRRAVRYGYTFLGFQKPFLHELMPLLAENFGDIFP 350

Query: 415 ELKQREAHIREIIAAEEASFGKTL---LKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGF 471
           EL  ++  I ++I  EE+SF +TL   LK +++ K+       +++ G+ AF L+DTYGF
Sbjct: 351 ELSAQQDFIAKVIMEEESSFLRTLDNGLKKLDQIKEEMVKTGSQIIDGKVAFELYDTYGF 410

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT L+A E G  VD  GF   M+  + RSR+A  ++ G  +++  +        GV 
Sbjct: 411 PLDLTSLIARESGYSVDESGFAKEMEVQKTRSRAAAEQETGDWVLVHEE-------EGV- 462

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
              +   + + Q    ++K      +       G+   +VL  + FYAE GGQ+ D+G++
Sbjct: 463 ---EFVGYDYLQSQSRIVKYRQIKDK------KGDRYQLVLDRTPFYAESGGQVGDQGWL 513

Query: 592 EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVI--CKVDYDRRKLIAPNHTCTH 649
           +       V + +     ++H         R     +V+   +V+  +R+L   NH+ TH
Sbjct: 514 QSDRERIQVLDTKRENDLIVHF------VDRLPTDPKVVFAAQVNEQKRRLTMSNHSATH 567

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +++ ALREVLG HV QKGS+V  + LRFDFSH   +  E +  +E IVN +I+  + +  
Sbjct: 568 LMHAALREVLGGHVQQKGSLVNEDLLRFDFSHFAKMSEEEIAAVEQIVNTKIRENIALGE 627

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
           +     E     G  A+FGE Y D VRV+   R                 S ELCGGTH+
Sbjct: 628 QRNVPIEEAKKQGATALFGEKYGDFVRVITFDR---------------HFSVELCGGTHV 672

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK--------I 821
             T     F ++SE  I+ G+RRI A+T   A        +L KE+ +  K        +
Sbjct: 673 PATGNIGLFKIVSEGSISAGVRRIEAITANAAETYINGQLALVKEIQELLKNPKDLKKSL 732

Query: 822 EGSLLEKNQVRK 833
           E  + E+N+++K
Sbjct: 733 EALIQERNELKK 744


>gi|390944174|ref|YP_006407935.1| alanyl-tRNA synthetase [Belliella baltica DSM 15883]
 gi|390417602|gb|AFL85180.1| alanyl-tRNA synthetase [Belliella baltica DSM 15883]
          Length = 874

 Score =  636 bits (1640), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 344/792 (43%), Positives = 475/792 (59%), Gaps = 68/792 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A K+R TF +FF+ K H    SSP+V  NDPTL+F NAGMNQ+K  FLG      +++K 
Sbjct: 3   AKKIRSTFIEFFQSKQHQFVPSSPIVVKNDPTLMFTNAGMNQFKDYFLGN-----EIAKA 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           TR  N+QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAIEWAWELLT+VY
Sbjct: 58  TRVANSQKCLRVSGKHNDLEEVGVDTYHHTMFEMLGNWSFGDYFKKEAIEWAWELLTEVY 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +LP DRLY + FGGD   GL  D+EA ++W   +   R++    KDNFWEMGDTGPCGPC
Sbjct: 118 KLPKDRLYVSVFGGDIADGLDQDSEAFELWKNIISEDRIIFGSKKDNFWEMGDTGPCGPC 177

Query: 240 SEIHYDRTGNRDAA-----SLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D   N + +     +LVNND P  IEIWN+VF+QFNR  DGSLK LPAKHVDTG+
Sbjct: 178 SEIHVDLRSNEERSQESGFNLVNNDHPQVIEIWNLVFMQFNRIKDGSLKELPAKHVDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   +Q K SNYDTD+FMP  + ++  +G      K G +  +++D+A RV+ DHI
Sbjct: 238 GFERLVRAIQQKSSNYDTDIFMPFIEVLEAKSGK-----KYGEN--EQLDIAMRVIVDHI 290

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R ++F+IADG  P N    YV+RRILRRAVRYG   L  Q  F   L+ ++    G++FP
Sbjct: 291 RAIAFSIADGQLPSNNKAGYVIRRILRRAVRYGYTFLGFQKPFMFELMPLLATNFGEIFP 350

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG---KVLSGQDAFILWDTYGF 471
           E+  ++  I ++I  EEASF +TL  G++   +   D++    K++ G+ AF L+DT+GF
Sbjct: 351 EVASQQDFIAKVIQEEEASFLRTLENGLKILDQIKSDMESKSTKIIDGKTAFELYDTFGF 410

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           P DLT L+A E G+ VD +GF   M++ + RSRSA  ++ G  I              ++
Sbjct: 411 PFDLTSLIARENGISVDEKGFAEEMEKQKTRSRSAAEQETGDWI--------------MV 456

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
           A ++  +FI + DH      I    +  +    G+   +VL  + FYAE GGQ+ D+G++
Sbjct: 457 ADEEGVEFIGY-DHLEAESQIIKYRQIKDK--KGDRFQLVLDKTPFYAESGGQVGDQGWL 513

Query: 592 EGLFGSFYVRNVQIYGGFVIH-IGSL-TEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
                   V + +     ++H +  L T+ +  FS       KV+ ++R+L   NHT TH
Sbjct: 514 RSESEQIKVLDTKKENDLIVHFVDKLPTDTSAIFS------AKVNAEKRRLTMNNHTATH 567

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +L  AL+EVLGDHV QKGS+V  E LRFDF+H   +  E +  +E+IVN +I+  + +  
Sbjct: 568 LLQSALKEVLGDHVQQKGSLVNEELLRFDFAHFSKLSDEEINAVEAIVNAKIRENIVLQE 627

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
           +     E     G  A+FGE Y + VRV+   R                 S ELCGGTH+
Sbjct: 628 QRNVPIEEAKKQGATALFGEKYGEFVRVITFDR---------------DFSVELCGGTHV 672

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK--------I 821
           ++T +   F ++SE  I+ G+RRI A+T   A        +L KE+ +  K        +
Sbjct: 673 ASTGQIGLFKIISEGSISSGVRRIEAITAAAADAFMNENLALVKEIQELLKSPRDLKKAV 732

Query: 822 EGSLLEKNQVRK 833
           E  + EKN ++K
Sbjct: 733 EALIQEKNDLKK 744


>gi|21673007|ref|NP_661072.1| alanyl-tRNA synthetase [Chlorobium tepidum TLS]
 gi|41018235|sp|Q8KG04.1|SYA_CHLTE RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|21646071|gb|AAM71414.1| alanyl-tRNA synthetase [Chlorobium tepidum TLS]
          Length = 885

 Score =  632 bits (1629), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 356/798 (44%), Positives = 472/798 (59%), Gaps = 80/798 (10%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R +F  FF  K H   +S+PV+P  DPTLLF NAGMNQ+K +FLG         + TR
Sbjct: 5   EIRQSFLDFFAGKEHRIVRSAPVIPAEDPTLLFTNAGMNQFKDVFLGKG-----TREYTR 59

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A +TQKCIRA GKHNDL+DVG+DTYHHTFFEMLGNWSFGDY+K EAI WAWEL+T+V++L
Sbjct: 60  AADTQKCIRASGKHNDLEDVGRDTYHHTFFEMLGNWSFGDYYKKEAIGWAWELMTEVWKL 119

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLKF--LPASRVLPFGCKDNFWEMGDTGPCGPC 239
           P +RLYAT +  DE        E+  +W     +  S +L FG KDNFWEMG+TGPCGPC
Sbjct: 120 PKERLYATVYHDDE--------ESFKLWQSETDIEHSHILKFGDKDNFWEMGETGPCGPC 171

Query: 240 SEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERL 299
           SEIH D T +     LVN  D   IE+WN+VFIQ++R++DG+L PLP KHVDTG+GFER+
Sbjct: 172 SEIHIDLTPDGSGGPLVNVGDHRVIELWNLVFIQYDRQADGTLVPLPQKHVDTGMGFERV 231

Query: 300 TSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSF 359
            ++LQ K SNYD+DVF P+FD I + TG   Y+  + +      D+A RV+ADH RTL+F
Sbjct: 232 AAVLQGKSSNYDSDVFAPLFDRITELTGT-VYTASLDSPS----DIAMRVIADHCRTLTF 286

Query: 360 AIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQR 419
           A++DG+ PGNEGR YVLRRILRRAVRY    L   +     +V ++V+ MGDVFPEL+++
Sbjct: 287 ALSDGAMPGNEGRGYVLRRILRRAVRYAG-TLGCHEPIIYKMVEVLVRTMGDVFPELEKQ 345

Query: 420 EAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ---GKVLSGQDAFILWDTYGFPLDLT 476
           +A + +II AEE SF  TL +G E F +   D++      +SG DAF L+DT+GFPLDLT
Sbjct: 346 QATVEKIIRAEEESFLVTLGRGTEIFNEVVADMKTAGSTTISGADAFKLYDTFGFPLDLT 405

Query: 477 QLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDS 536
           +LMA E GL +D  GF + M E + R+R            MD      +        DD 
Sbjct: 406 RLMAAEVGLGIDEAGFEHCMMEQKTRAR------------MDRKGKMQMQ-------DDG 446

Query: 537 FKFIWFQDHKSVIKAIY----TGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIE 592
            ++ WF          Y    T +  + + V G+++ +VL  + FYAE GGQ+ D G +E
Sbjct: 447 GEWQWFAPEAPTTFVGYDMLETEATLVAARVSGDKLLMVLDQTPFYAESGGQVGDHGTLE 506

Query: 593 GLFGSFYVRNVQIYGGFVIHI----------GSLTEGAGRFSVGEEVICKVDYDRRKLIA 642
                  V + +  G  ++H+           ++T     F     V   VD DRR    
Sbjct: 507 TAGYRLDVTDTRKDGEQIVHVVTSAHDKVRDCAVTPADVSFDGVVSVKAAVDRDRRVATE 566

Query: 643 PNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIK 702
            NHT TH+L+ ALR+VLG+HV QKGS+V PE+LRFDFSH   V  E L ++E  VN +I+
Sbjct: 567 RNHTATHLLHAALRKVLGEHVQQKGSLVTPERLRFDFSHFSKVSAEELEQVEHEVNAEIR 626

Query: 703 AELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAE 762
               V        E     G  A FG+ Y D VRVV +                  IS E
Sbjct: 627 KAASVTKHADVPYEEALALGALAFFGDKYADRVRVVEVP----------------GISIE 670

Query: 763 LCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIE 822
           LCGGTH+ N  +     ++SE  +A GIRRI AV TG A +A      L +E  D  +I+
Sbjct: 671 LCGGTHVGNIGQIGMVKIVSESSVAAGIRRIEAV-TGAAAEAL-----LWQEYRDLQEIK 724

Query: 823 GSLLEKNQVRKAQKKVAE 840
            +LL+     +A  K+ E
Sbjct: 725 -NLLKLKADEEAGPKIKE 741


>gi|355748596|gb|EHH53079.1| hypothetical protein EGM_13642 [Macaca fascicularis]
          Length = 985

 Score =  632 bits (1629), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 342/761 (44%), Positives = 464/761 (60%), Gaps = 43/761 (5%)

Query: 84  VVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGK 143
           V P  DP+LLF NAGMNQ+KPIFLGT DP ++++   R  N+QKC+RAGG+HNDL+DVG+
Sbjct: 64  VRPRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRRVANSQKCVRAGGRHNDLEDVGR 123

Query: 144 DTYHHTFFEMLGNWSFG-DYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPD 202
           D  HHTFFEMLGNW+FG +YFK EA   AWELLT+VY +P +RL+ +YF GD KAGL PD
Sbjct: 124 DLSHHTFFEMLGNWAFGGEYFKEEACSMAWELLTQVYGIPTERLWVSYFDGDPKAGLEPD 183

Query: 203 NEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDP 261
            E RDIWL   +PA+RVL FG ++NFWEMG+TGPCGPC+EIHYD  G   A        P
Sbjct: 184 LETRDIWLSLGVPATRVLSFGPQENFWEMGNTGPCGPCTEIHYDLAGGVGA--------P 235

Query: 262 TCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDA 321
             +E+WN+VF+Q NRE+DGSL+PLP  HVDTG+G ERL ++LQ K S YDTD+F P+  A
Sbjct: 236 QLVELWNLVFMQHNREADGSLQPLPQWHVDTGMGLERLVAVLQGKHSTYDTDLFSPLLHA 295

Query: 322 IQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILR 381
           IQQ   A PY G+VG  D  + D AYRVVADHIRTLS  I+DG  PG  G   VLRRILR
Sbjct: 296 IQQGCRAPPYLGRVGVADEGRTDTAYRVVADHIRTLSVCISDGVFPGMSGPPLVLRRILR 355

Query: 382 RAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKG 441
           RAVR+  E+LKA  GF   LV +VV+ +GD +PEL++  A I  ++  +EA+F  +L +G
Sbjct: 356 RAVRFSMEILKAPPGFLGSLVPVVVETLGDAYPELQRNSAQISNLVLEDEAAFLASLERG 415

Query: 442 IEKFKKAAQDVQGKVLSGQDAF---ILWDT-----YGFPLDLTQLMAEERGLLVDIEGFN 493
                +       + L   D F   + W        G PLD+ +LM EE+G+ +D  G  
Sbjct: 416 RRIIDRTL-----RTLGPSDMFPAEVAWSLSLSGDLGLPLDMVELMLEEKGVQLDSTGLE 470

Query: 494 N-AMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSFKFIW---------FQ 543
             A + A+ ++R A+  Q  G + +D  A   L ++GV  TD S K+ +         F 
Sbjct: 471 RLAQEAAQHQARQAEPVQKQG-LWLDVHALGELQRQGVPPTDSSPKYNYSLRPNGSYEFG 529

Query: 544 DHKSVIKAIYT-GSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFGS---FY 599
             ++ +  +YT     + SV  G   G++L  ++FYAEQGGQ  D G++  +      F 
Sbjct: 530 TCEAQVLQLYTEDGTAVASVGKGQRCGLLLDRTNFYAEQGGQASDRGYLVRVGQEDVLFP 589

Query: 600 VRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVL 659
           V   Q+ GGF++H     E      +G++V   VD   R      HT TH+LN+ALR+ L
Sbjct: 590 VARAQVCGGFILHEAVAPEC---LQIGDQVQLHVDKAWRLACMAKHTATHLLNWALRQTL 646

Query: 660 GDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKC 719
           G   +Q+GS + PE+LR D +    + PE LR +E+ V E ++ +  V+ +E  LA    
Sbjct: 647 GPGTEQQGSHLNPEQLRLDVTTQTALTPERLRAVENTVQEAVQQDKPVYMEEVPLALTAQ 706

Query: 720 INGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFA 779
           + GLR    EVYPDPVRVV++G  V   L DP ++  L  S ELC GTHL  T       
Sbjct: 707 VPGLRC-LDEVYPDPVRVVSVGVPVAHAL-DPASQAALQTSVELCCGTHLLRTGAVGDLV 764

Query: 780 LLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK 820
           ++ +  ++KG  R+ A+T   A +A E   +L +EV  A++
Sbjct: 765 IIGDRQLSKGTTRLLAITGEQAQQARELGQNLAQEVKAATE 805


>gi|332877658|ref|ZP_08445401.1| alanine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332684407|gb|EGJ57261.1| alanine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 878

 Score =  631 bits (1628), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 366/869 (42%), Positives = 505/869 (58%), Gaps = 72/869 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R  F KFFE K H    S+P+V  NDPTL+F NAGMNQ+K  FLG A P     K 
Sbjct: 3   SQEIRQQFLKFFESKGHTIVPSAPMVIKNDPTLMFTNAGMNQFKEFFLGNAKP-----KQ 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           TR  +TQKC+R  GKHNDL++VG+DTYHHT FEMLGNWSFGDYFK EAI WAWELLT+VY
Sbjct: 58  TRVVDTQKCLRVSGKHNDLEEVGRDTYHHTMFEMLGNWSFGDYFKKEAISWAWELLTEVY 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           ++P + LY T F G E+ G+  D EA DIW + +    +L    KDNFWEMGD GPCGPC
Sbjct: 118 KIPKEHLYVTVFEGSEEEGVPFDQEAYDIWKERIAEDHILLGNKKDNFWEMGDQGPCGPC 177

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           +EIH D   + + A      LVNND P  IEIWN VF++FNR++DGSL+ LP+K+VDTG+
Sbjct: 178 TEIHVDIRSDEEKAKIAGRDLVNNDHPQVIEIWNNVFMEFNRKADGSLEKLPSKNVDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL  +LQ K SNYDTDVF P+   +++ T ++ YSG   + + +++++A RV++DHI
Sbjct: 238 GFERLCMVLQKKQSNYDTDVFTPLIQKVEEITKSKYYSGSNVSAEQEQINIAIRVISDHI 297

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R ++FAIADG  P N G  YV+RRILRRA+RYG   L  ++ F   LV  + K MG  FP
Sbjct: 298 RAVAFAIADGQLPSNNGAGYVIRRILRRAIRYGFTFLNQKEPFIYKLVETLTKQMGSTFP 357

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLD 474
           EL+++   I  +I  EE SF +TL +G+       Q+   K LSG  AF L+DTYGFP D
Sbjct: 358 ELEKQAFIIMNVIKEEENSFLRTLEQGLLMLDVMIQNTTNKQLSGSKAFELYDTYGFPKD 417

Query: 475 LTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATD 534
           LT L+  E+GL +D  GF   + + +ERSR+A   +AG  +              VL  D
Sbjct: 418 LTALILSEKGLTLDEAGFEENLQKQKERSRAAAQVKAGDWV--------------VLRDD 463

Query: 535 DSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGL 594
           +  +FI +   ++V++ +      +ES   G    +V  ++ FYAE GGQ+ D+G ++  
Sbjct: 464 EEEEFIGYDTLEAVVRLVKYRK--VESQKDGTHYQLVFNTTPFYAEGGGQVGDKGTLQSA 521

Query: 595 FGSF-YVRNVQIYGGFVIHIGS-LTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLN 652
            G   Y+ + +     +IHI   L E     ++ +    +V    R+L   NH+ TH+L+
Sbjct: 522 NGELVYILDTKKENNLIIHIAEHLPE-----NLTDPFKAEVHPLSRQLAEANHSATHLLH 576

Query: 653 FALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEA 712
            ALREVLG HV+QKGS V PE LRFDFSH   +  E LR +E IVN +I  ++ +     
Sbjct: 577 QALREVLGTHVEQKGSRVSPETLRFDFSHFAKMTDEELREVERIVNRRIWEKIPLQEHRN 636

Query: 713 TLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNT 772
              +     G  A+FGE Y D VR++  G                  S ELCGGTH+ NT
Sbjct: 637 IPIQQAIEAGAMALFGEKYGDHVRMIQFGD-----------------SRELCGGTHVKNT 679

Query: 773 REAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKNQVR 832
            +   F +LSE  +A GIRRI A+T+G A K F      EK VD+   I+ +L       
Sbjct: 680 GDIWFFKILSEGAVAAGIRRIEAITSGGAMKYF---AEQEKLVDN---IKSTLKNAQDPI 733

Query: 833 KAQKKVAEENLQ-------------KAVKVATETAEAAASNGKPFCISRVEVGLDAAAVR 879
           KA   + EEN Q             K +KV+ +  E A  NG    I +++  LD A ++
Sbjct: 734 KAIVHLQEENAQLQKELELLKKEQAKNLKVSLKN-EFATINGVQCLIKQLD--LDTATLK 790

Query: 880 EAVLKVIEQKGMPVMVFSTDETTNKAVVC 908
           +   ++  +   P ++F +       ++C
Sbjct: 791 DLAFQLGNEVENPFILFGSAYEGKALLLC 819


>gi|326800500|ref|YP_004318319.1| alanyl-tRNA synthetase [Sphingobacterium sp. 21]
 gi|326551264|gb|ADZ79649.1| alanyl-tRNA synthetase [Sphingobacterium sp. 21]
          Length = 871

 Score =  631 bits (1628), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 381/933 (40%), Positives = 528/933 (56%), Gaps = 88/933 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R  F  FF+ K H    S+P+V  NDPTL+F NAGMNQ+K +FLG A       K 
Sbjct: 3   SREIRQAFLNFFKSKGHEIVPSAPIVVKNDPTLMFTNAGMNQFKELFLGEAPI-----KY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +R  +TQ+C+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI W+WELLT VY
Sbjct: 58  SRVVDTQRCLRVSGKHNDLEEVGIDTYHHTMFEMLGNWSFGDYFKKEAIAWSWELLTNVY 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           ++  DRLY T F GD + GL  D EA   W + + ++R+L    KDNFWEMG+TGPCGPC
Sbjct: 118 KIDKDRLYVTVFEGDSEEGLPEDAEAYGYWKEHIDSTRILKGNKKDNFWEMGETGPCGPC 177

Query: 240 SEIHYDRTGNR-----DAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D   +      D ++LVN D P  IEIWN VF+QFNR  DGSL+PLPAKHVDTG+
Sbjct: 178 SEIHVDCRSDEERRMIDGSTLVNADHPQVIEIWNNVFMQFNRLKDGSLQPLPAKHVDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL  +LQ+K SNYDTD+F P+   I +A        KV   + ++ D+A RV+ADHI
Sbjct: 238 GFERLVRVLQSKTSNYDTDIFQPLIQLIAKA-------AKVQYGENEQQDIAMRVMADHI 290

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R +SFAIADG  P N    YV+RRILRRAVRY    L  ++ F N LV  + +    VF 
Sbjct: 291 RAISFAIADGQLPSNNKAGYVIRRILRRAVRYAYTFLNFKEPFLNTLVIPLAQQFEGVFD 350

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLD 474
           EL +++  +++++  EE SF +TL+ GI++F+    D QG ++SG  AF L+DTYGFP+D
Sbjct: 351 ELYKQQDFVQKVVLEEELSFLRTLVTGIQRFESYHTD-QG-LVSGDFAFELYDTYGFPID 408

Query: 475 LTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATD 534
           LT LMA E+G  VD+ GF NA+++ +ERSR+A     G  + ++ D          LAT+
Sbjct: 409 LTDLMAREKGWKVDMPGFENALNKQKERSRAATAIDTGDWVTVNEDGETHFVGYDNLATE 468

Query: 535 DSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI--E 592
              K + ++   +  K  Y                +VL+ + FYAE GGQ+ D G +  E
Sbjct: 469 T--KILKYRKVSAKGKIQYQ---------------LVLSQTPFYAEGGGQVGDTGILIHE 511

Query: 593 GLFGSFYVRNVQIYGGFVIHIG----SLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
               +  + + +   G +IH      S  EG            KV  DRR+ I  NH+ T
Sbjct: 512 TSKETIQIVDTKKENGLIIHFSDELPSHLEGV--------FFAKVAEDRRRDIQSNHSAT 563

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+L+ AL++VLG+HV+QKGS+V  E LRFDFSH   V  E LRR+E +VN +I+  L + 
Sbjct: 564 HLLHAALKQVLGEHVNQKGSLVSEEVLRFDFSHFAKVSDEELRRVEQVVNAKIRENLALD 623

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
            +           G+ A+FGE Y D VRV+                   + S ELCGGTH
Sbjct: 624 ERRNVPYNDAIDMGVTALFGEKYGDFVRVIIFDE---------------NFSKELCGGTH 668

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV--------DDASK 820
           +  T     F +LSE  +A G+RRI A+T   A +  +    L  E+        D ++ 
Sbjct: 669 VQYTGNIGFFKILSEGAVAAGVRRIEAITGRRAEEIIDRQDELINELKNLLKHPKDLSAA 728

Query: 821 IEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVRE 880
           I G L E ++++K  +K   E  Q+  +V  E  +A   NG  F   +VE+  +A AV+ 
Sbjct: 729 ITGLLQENSKLKKEVEKSLVEKAQQLRQVLVE--KAIDINGVRFIGEQVELP-NADAVKN 785

Query: 881 ---AVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQ--SKQLEVSEWLTAALQPLK 935
              A+ K I+     V+    D   N  VV       SD   ++ L+  + +    + +K
Sbjct: 786 LAFAIKKAIDNGLFLVLAADFDGKPNLTVVL------SDDLVNRGLDAGKIVRELAKEIK 839

Query: 936 GRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAA 968
           G  G G+   A+  G D++ +T A++ A  F  
Sbjct: 840 G-GGGGQPFYATAGGKDSSGLTVALEKAKSFVG 871


>gi|440750581|ref|ZP_20929822.1| Alanyl-tRNA synthetase [Mariniradius saccharolyticus AK6]
 gi|436480799|gb|ELP37011.1| Alanyl-tRNA synthetase [Mariniradius saccharolyticus AK6]
          Length = 876

 Score =  631 bits (1627), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 348/791 (43%), Positives = 473/791 (59%), Gaps = 66/791 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A  +R  F  FF+ K H    SSP+V  NDPTL+F NAGMNQ+K   LG   P     K 
Sbjct: 3   AKDIRTQFIDFFKSKGHTYIPSSPIVVKNDPTLMFTNAGMNQFKDYILGNETP-----KA 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           TR  N+QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAIEWAWELLT+VY
Sbjct: 58  TRVANSQKCLRVSGKHNDLEEVGVDTYHHTMFEMLGNWSFGDYFKKEAIEWAWELLTEVY 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +LP DRLY + FGGD    L  D EA  +W + +P SR+L    KDNFWEMGDTGPCGPC
Sbjct: 118 KLPKDRLYVSVFGGDAGDKLGKDMEAFQLWSQIVPESRILFGNKKDNFWEMGDTGPCGPC 177

Query: 240 SEIHYDRTGNR-----DAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D   +      +  +LVNND P  IEIWN+VF+QFNR +DGSLK LPAKHVDTG+
Sbjct: 178 SEIHIDLRSDAERQQVEGYTLVNNDHPQVIEIWNLVFMQFNRLADGSLKELPAKHVDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   +Q K SNYD+D+F P    I++ +G      + G D  +KVD+A RV+ DHI
Sbjct: 238 GFERLVRAIQAKSSNYDSDIFTPFIQFIEKKSGK-----QYGLD--EKVDIAMRVIVDHI 290

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R +SF+IADG  P N    YV+RRILRRAVRYG   L     F   L+ ++ +  G++FP
Sbjct: 291 RAISFSIADGQLPSNNKAGYVIRRILRRAVRYGYTFLGFHKPFLYELLPLLAETFGEIFP 350

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ--GK-VLSGQDAFILWDTYGF 471
           EL  ++  + ++I  EE SF +TL  G+ K  +  +++   GK V+ G+ AF L+DTYGF
Sbjct: 351 ELAAQQDFVAKVIMEEEQSFLRTLDNGLRKLDQIKEELHQSGKSVVDGKIAFELYDTYGF 410

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT L+A E G  VD +GF   MD  + RSR+A  ++ G  ++++A+        GV 
Sbjct: 411 PLDLTSLIARENGFSVDEKGFAAEMDIQKNRSRAAAEQETGDWVIVNAE-------EGV- 462

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
              +   + + +    ++K      +       G+   IVL  + FYAE GGQ+ D+G++
Sbjct: 463 ---EFIGYDYLESQSRIVKYRQITDK------KGDRFQIVLDRTPFYAESGGQVGDQGWL 513

Query: 592 EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHML 651
                +  V + +     ++H   + +   +F    +   KVD  +RK    NH+ TH+L
Sbjct: 514 INGAETVKVLDTKKENDLIVHF--VDKLPSQFDATFQ--SKVDAAKRKDSMNNHSATHLL 569

Query: 652 NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF-SK 710
           + AL++VLGDHV QKGS+V  E LRFDFSH   +  E + ++ESIVN +I+  + ++  +
Sbjct: 570 HAALKQVLGDHVQQKGSLVNEELLRFDFSHFSKMTEEEIAQVESIVNAKIRENIALYEQR 629

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
              +AEAK   G  A+FGE Y D VR++           DP+       S ELCGGTH+S
Sbjct: 630 NVPIAEAKK-QGATALFGEKYGDFVRLITF---------DPQ------FSVELCGGTHVS 673

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK--------IE 822
            T     F ++SE  IA G+RRI A+T   A     +   L KE+ +  K        +E
Sbjct: 674 ATGVIGLFKIVSESSIAAGVRRIEAITAKTAEDFVNSQLELIKEIGEMLKSPRDLKKSVE 733

Query: 823 GSLLEKNQVRK 833
             + E+N+++K
Sbjct: 734 TLVQERNELKK 744


>gi|340616973|ref|YP_004735426.1| alanyl-tRNA synthetase [Zobellia galactanivorans]
 gi|339731770|emb|CAZ95035.1| Alanyl-tRNA synthetase [Zobellia galactanivorans]
          Length = 871

 Score =  630 bits (1624), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 362/866 (41%), Positives = 502/866 (57%), Gaps = 72/866 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R  F  FF++K H    S+P+V  +DPTL+F NAGMNQ+K  FLG +     ++K 
Sbjct: 3   SKEIRSQFLNFFKEKGHKIVPSAPMVIKDDPTLMFTNAGMNQFKEFFLGNS-----VAKN 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            RA ++QKC+R  GKHNDL++VGKDTYHHT FEMLGNWSFGDYFK EAIEWAWELLT+V 
Sbjct: 58  PRAVDSQKCLRVSGKHNDLEEVGKDTYHHTMFEMLGNWSFGDYFKKEAIEWAWELLTEVL 117

Query: 180 RLPADRLYATYFGGDEKAG-LAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGP 238
           ++  D LY + F G + A  L  D EA D+W   +P  R++    KDNFWEMGD GPCGP
Sbjct: 118 KIDKDCLYVSVFEGSKDADKLDLDTEAFDLWKAIVPEDRIILGNKKDNFWEMGDQGPCGP 177

Query: 239 CSEIHYD-RTGNRDA----ASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTG 293
           CSEIH D R+    A    ASLVN D P  +EIWN+VF+Q+NR++DGSL+PLPA+HVDTG
Sbjct: 178 CSEIHVDIRSAEEKAKVPGASLVNADHPQVVEIWNLVFMQYNRKADGSLEPLPARHVDTG 237

Query: 294 LGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADH 353
           +GFERL  ++Q   SNYDTDVF PI   I+  T +     K G D+  ++D+A RV+ADH
Sbjct: 238 MGFERLCMVMQGVQSNYDTDVFKPIIREIETITHS-----KYGKDE--EIDIAIRVIADH 290

Query: 354 IRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVF 413
           IR +SF+IADG  P N G  YV+RRILRRAVRYG   L  ++ F   LVN++ + MG+ F
Sbjct: 291 IRAVSFSIADGQLPSNTGAGYVIRRILRRAVRYGFTFLNTKEPFMYRLVNVLTEDMGEAF 350

Query: 414 PELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPL 473
           PELK++   I  +I  EE SF KTL +G+    +   +V+GK + G+ AF L+DTYGFP+
Sbjct: 351 PELKEQRQLIENVIKEEEYSFLKTLEQGLVLLDQVILNVKGKEVDGRKAFELYDTYGFPI 410

Query: 474 DLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLAT 533
           DLT L+  E+GL +D +GF  AM E + RS+SA              +  +     VL++
Sbjct: 411 DLTALILSEKGLTLDEKGFELAMQEQKNRSKSA--------------SEISKDDWEVLSS 456

Query: 534 DDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEG 593
           D   +F+ +   ++ +K +      + S   G +  +V   + FY E GGQ+ D+G++E 
Sbjct: 457 DLEQEFVGYDMLETNVKLVKYRK--VTSKKAGEQYQLVFNLTPFYPEGGGQVGDKGYLEM 514

Query: 594 LFGS-FYVRNVQIYGGFVIHIGS--LTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHM 650
             G   Y+ + +     +IH       +  G F         VD  +R+    NHT TH+
Sbjct: 515 PNGDVVYILDTKKENNEIIHFTKNLPADLNGTFR------AVVDKKQRERTQANHTATHL 568

Query: 651 LNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSK 710
           L+ ALREVLG HV+QKGS V  + LRFDFSH   V PE LR +E+ VN +I  +L    +
Sbjct: 569 LHQALREVLGKHVEQKGSAVHSKYLRFDFSHFSKVTPEELREVENFVNARIAGQLPFEEQ 628

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
                E     G  A+FGE Y D VR V  GR                 S ELCGGTH+ 
Sbjct: 629 RNIPVEKALEEGAMALFGEKYGDTVRTVRFGR-----------------SIELCGGTHVK 671

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACS--------LEKEVDDASKIE 822
           NT +   F + SE  +A GIRRI A+T+  A K F A           L     D  K  
Sbjct: 672 NTGDIWHFKIKSEGAVASGIRRIEAITSD-AVKDFYAENDRVLLDIKGLLNNAQDPVKAV 730

Query: 823 GSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAV 882
            +L E+N   K + +   ++  K +K+  +  E    NG  F   +++  LDAA +++  
Sbjct: 731 STLQEENAKLKKEVEALLKDKAKNLKIELKN-ELQEVNGVQFLAKKID--LDAAGIKDLS 787

Query: 883 LKVIEQKGMPVMVFSTDETTNKAVVC 908
            ++ + +    ++F+T++     + C
Sbjct: 788 FEMGQNQDNLFLLFATEQNGKALLSC 813


>gi|288940831|ref|YP_003443071.1| alanyl-tRNA synthetase [Allochromatium vinosum DSM 180]
 gi|288896203|gb|ADC62039.1| alanyl-tRNA synthetase [Allochromatium vinosum DSM 180]
          Length = 867

 Score =  629 bits (1623), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 364/926 (39%), Positives = 531/926 (57%), Gaps = 77/926 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R +F  +FE + H    SSP++P NDPTLLF NAGM Q+K  FLG      +    
Sbjct: 4   SAELRASFLDYFEQRQHERVASSPLIPANDPTLLFTNAGMVQFKDAFLGR-----ERRAS 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            RA ++Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK EAIE+AW+ LT+V 
Sbjct: 59  NRAVSSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIEYAWDYLTRVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPA--SRVLPFGCKDNFWEMGDTGPCG 237
            LP +RL+ T F          D+EA  IWLK +     R    G KDNFW MGDTGPCG
Sbjct: 119 ALPPERLWVTVF--------EEDDEAAGIWLKEIGVDPQRFSRCGAKDNFWSMGDTGPCG 170

Query: 238 PCSEIHYDR--TGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           PCSEI YD             + D    +EIWN+VF+QFNR++DG++ PLP   VDTG+G
Sbjct: 171 PCSEIFYDHGPAIPGGPPGSPDEDGDRYVEIWNLVFMQFNRDADGNMTPLPRPSVDTGMG 230

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
            ERL +++Q   SNY+ D+F  + +A  QATG             D  D + RV+ADHIR
Sbjct: 231 LERLAAVMQGVHSNYEIDLFRHLIEAAAQATGC-----------TDLADKSLRVIADHIR 279

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPE 415
           + +F I DG  PGNEGR YVLRRI+RRA+R+G   L     FF+ LV  + + MGD +PE
Sbjct: 280 STAFLITDGVTPGNEGRGYVLRRIMRRAIRHGYR-LGCSTPFFHTLVEPLAREMGDAYPE 338

Query: 416 LKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDL 475
           L+  ++H+  ++  EE  F +TL  G+    +A  D+ G  + G+  F L+DTYGFP+DL
Sbjct: 339 LRASQSHVERLVKLEEERFAETLEHGMRLLDEAIADLSGDQIPGETVFKLYDTYGFPVDL 398

Query: 476 TQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDD 535
           T  +A ERGL +D+ GF  AM+  +ER+R+A   Q G A  +D           +    D
Sbjct: 399 TADIARERGLTLDVAGFEQAMERQKERARAA--SQFGSAQTLDIQ---------IQGETD 447

Query: 536 SFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLF 595
              +   Q+  +++ A+Y G E  +++  G E  ++L  S FY E GGQ+ D G++    
Sbjct: 448 FCGYDRVQEEATIV-ALYRGGESCDALEAGEEGLVILDRSPFYGESGGQVGDRGWLNTET 506

Query: 596 GSFYVRNVQIYG-GFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFA 654
             F V++ Q  G G ++H+G + EGA   +VG+ V  +VD DRR+  A NH+ TH+L+ A
Sbjct: 507 ARFGVQDTQKKGDGVLVHVGRVEEGA--LTVGDRVDARVDADRRRATALNHSATHLLHAA 564

Query: 655 LREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATL 714
           LREVLG HV QKGS+V PE+LRFDFSH +PV  E L  IE +VN +++A   V ++  +L
Sbjct: 565 LREVLGPHVQQKGSLVGPERLRFDFSHFEPVSREQLLTIERMVNREVRANHLVETRIMSL 624

Query: 715 AEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTRE 774
            +AK  +G  A+FGE Y D VRV+ +G                  S ELCGGTH+    +
Sbjct: 625 EDAKA-SGAMALFGEKYADQVRVLRMG----------------EFSTELCGGTHVKAVGD 667

Query: 775 AEAFALLSEEGIAKGIRRITAVTTGLAYKAFEA--------ACSLEKEVDDASKIEGSLL 826
                ++SE GIA G+RRI A+T   A +  EA        A  L+   +D  +    L+
Sbjct: 668 IGLIKIVSETGIAAGVRRIEAITGASALEWVEADEERLLRLAGLLKGGREDVDERVTQLI 727

Query: 827 EKNQVRKAQKKVAEENLQKAVKVATE-TAEAAASNGKPFCISRVEVGLDAAAVREAVLKV 885
           ++   R+ +K++ +   + A     +  A+A    G     +R++ G D  ++R  + ++
Sbjct: 728 DR--ARRLEKEIEQLKAKAASSAGQDLAAQAIDIQGIKTLAARLD-GADPKSLRVTLDQL 784

Query: 886 IEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGL 945
            ++ G  V+V +T E+  K  + AGV +  D + +L+  + +    + + G+ G G+  +
Sbjct: 785 KDKLGSAVVVLAT-ESDGKVSLVAGVTK--DLTDRLKAGDLIREVAEKVGGK-GGGRPDM 840

Query: 946 ASGQGTDAAQVTPAMDLAAEFAAMKL 971
           A   G D A +  A++L   + A +L
Sbjct: 841 AQAGGNDPAGLPAALELVPGWVAARL 866


>gi|373958617|ref|ZP_09618577.1| alanyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
 gi|373895217|gb|EHQ31114.1| alanyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
          Length = 927

 Score =  629 bits (1622), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 385/972 (39%), Positives = 530/972 (54%), Gaps = 115/972 (11%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R  F  FF  K H    S+P+V  NDPTL+F NAGMNQ+K IFLG      +  K 
Sbjct: 3   AQEIRQAFLDFFASKGHTIVPSAPIVVKNDPTLMFTNAGMNQFKSIFLGE-----EPVKF 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  +TQ+C+R  GKHNDL++VG D+YHHT FEMLGNWSFGDYFK EAI W+WELLT++Y
Sbjct: 58  PRVADTQRCLRVSGKHNDLEEVGIDSYHHTMFEMLGNWSFGDYFKKEAIAWSWELLTEIY 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +L   RLY TYF GDEK GLA D E  ++W +F+    +LP   KDNFWEMG+TGPCGPC
Sbjct: 118 KLDKSRLYVTYFEGDEKEGLAADTETLELWREFVADDHILPGNKKDNFWEMGETGPCGPC 177

Query: 240 SEIHYD-RT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIHYD RT       D A+LVN  D + +EIWN VF+QFNR  DGSL+PLPAKHVDTG+
Sbjct: 178 SEIHYDGRTDAERAQIDGATLVNGVDDSVMEIWNDVFMQFNRLKDGSLQPLPAKHVDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGAR--PYSGKVGADDAD----------- 341
           GFERL  I+Q K SNYDTDVF P+   I + +G    P+      + +D           
Sbjct: 238 GFERLVRIMQGKTSNYDTDVFQPLIQFIAEKSGIVYGPHPALSKGEGSDLQASEAHALKV 297

Query: 342 ----------KVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVL 391
                     K D+A RV+ADHIR +SFAIADG  P N    YV+RRILRRAVRY  + L
Sbjct: 298 LSFGEDLVEAKTDVAMRVMADHIRAISFAIADGQLPSNNKAGYVIRRILRRAVRYSYQYL 357

Query: 392 KAQDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKF----KK 447
             ++ F N LV I+ +    VF EL  ++  +++++  EE +F +TL +GI KF    +K
Sbjct: 358 NFKEPFLNQLVPILAQQFVGVFTELVNQKDFVQKVVLEEEVAFLRTLDRGINKFEEFIQK 417

Query: 448 AAQDVQ---------------------GKVLSGQDAFILWDTYGFPLDLTQLMAEERGLL 486
            AQ+++                       ++ G  AF L DTYGFPLDLT+LMA E G  
Sbjct: 418 EAQEIELIKNLANDSSSSLPTAFKDSKTTIIRGNFAFELSDTYGFPLDLTELMAREIGWT 477

Query: 487 VDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQDHK 546
           VD+EG+  A+ + + RSR+A     G  I              +L  DD+ +F+ + + +
Sbjct: 478 VDVEGYETALAQQKSRSRAATAIDTGDWI--------------LLKEDDTVEFVGYTETE 523

Query: 547 SVIKAIYTGSEFIESVVPGNE-VGIVLASSSFYAEQGGQIFDEGFIEGLFGSFY-VRNVQ 604
           ++   +    ++ +    G E   IVL  + FYAE GGQ+ D G +    G    V + +
Sbjct: 524 TIAHVV----KYRKVKAKGKEQYQIVLDKTPFYAESGGQVGDTGELIFPDGEIVPVTDTK 579

Query: 605 IYGGFVIH-IGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHV 663
              G ++H +  L E      + + +   VD D+RK    NH+ TH+L+ AL+EVLG HV
Sbjct: 580 KENGLIVHFVDQLPE-----DIDDALTAMVDVDKRKATNNNHSATHLLHAALKEVLGSHV 634

Query: 664 DQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGL 723
           +QKGS+V  E LRFDFSH   V  E + RIE+IVNE+I+  + V  +E    EA  + G 
Sbjct: 635 NQKGSLVNNEYLRFDFSHFSKVTDEEIARIEAIVNERIRENILVDIQELPKEEAIAM-GA 693

Query: 724 RAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSE 783
            A+FGE Y D VRVV +  K                S ELCGGTH+ +T +   F +++E
Sbjct: 694 NALFGEKYGDTVRVVTMDMK---------------FSIELCGGTHVQSTGQIGFFKIIAE 738

Query: 784 EGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDD--------ASKIEGSLLEKNQVRKAQ 835
             +A G+RRI A+T     + F     L +++ +        A  +EG L E ++++K  
Sbjct: 739 SAVAAGVRRIEAITGVAVEQYFNEQGKLIQQLKELLKNPKNVAKSVEGLLDENSRLKKEL 798

Query: 836 KKVAEENLQKAVKVATETAEAAASNGKPFCISRVEV-GLDAAAVREAVLKVIEQKGMPVM 894
           +K   E      +V    AEA   NG  F   +V++   DA       LK I      V+
Sbjct: 799 EKSVYEKAAGLKQVLAAKAEAI--NGINFIAQQVDLPNADAIKNLAYSLKDIVPNLFLVL 856

Query: 895 VFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAA 954
               D   N  V+   + E   + K L     +    + ++G  G G+   A+  G D +
Sbjct: 857 TAQIDGKPNITVM---IEESLVKEKGLNAGNIIRELAKEVQG-GGGGQPFYATAGGKDVS 912

Query: 955 QVTPAMDLAAEF 966
            +   +D A  F
Sbjct: 913 GLPRVLDKARSF 924


>gi|152988514|ref|YP_001349956.1| alanyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
 gi|205830183|sp|A6VA71.1|SYA_PSEA7 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|150963672|gb|ABR85697.1| alanyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
          Length = 874

 Score =  627 bits (1618), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 388/937 (41%), Positives = 537/937 (57%), Gaps = 90/937 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F +FFE+K H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLRFFEEKGHTRVASSSLIPANDPTLLFTNAGMNQFKDCFLGL-----EKRAY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           TRA  +QKC+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT  K
Sbjct: 58  TRATTSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWEFLTGEK 117

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFW 228
              LP ++L+ T +        A D+EA DIW K   +PA R++  G         DNFW
Sbjct: 118 WLNLPKEKLWVTVY--------ATDDEAYDIWTKEVGVPAERMVRIGDNKGAPYASDNFW 169

Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
            MGDTGPCGPC+EI +D   +           D    IEIWN VF+QFNR +DG + PLP
Sbjct: 170 AMGDTGPCGPCTEIFFDHGPDIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVMHPLP 229

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
           A  VDTG+G ER++++LQ+  SNY+ D+F  +  A  +A G          DDA  +   
Sbjct: 230 APSVDTGMGLERVSAVLQHVHSNYEIDLFQNLLKASAEAIG-------CANDDAPSL--- 279

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            +VVADHIR+ SF IADG  P NEGR YVLRRI+RRA R+G++ L A+  FF+ +V  +V
Sbjct: 280 -KVVADHIRSCSFLIADGVLPSNEGRGYVLRRIIRRACRHGNK-LGARGTFFHKIVAALV 337

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
             MGD FPELKQ++AHI  ++  EE  F KTL +G++  ++   ++QG V+ G   F L+
Sbjct: 338 AEMGDAFPELKQQQAHIERVLKTEEEQFAKTLEQGLKILEQDLAELQGSVIPGNVVFKLY 397

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFP+DLT  +A ER L +D +GF   M+  RER+R      A  A  MD ++     
Sbjct: 398 DTYGFPVDLTNDIARERELTIDEDGFEREMEAQRERAR------ASSAFGMDYNS----- 446

Query: 527 KRGVLATDDSFKFIWFQDHKSV--IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
              ++  D   +F+ +Q       I A++   + +E +  G E  +VL  + FYAE GGQ
Sbjct: 447 ---LVKVDGETRFLGYQGVSGAGQIVALFRDGQAVERLEEGEEGVVVLDQTPFYAESGGQ 503

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           + D G++E     F VR+    GG  +H G + EG    SVG  V  +VD   R+  A N
Sbjct: 504 VGDSGYLEAAGVRFDVRDTTKAGGAHLHHGVVAEGG--LSVGAAVKAEVDASVRQATALN 561

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ ALR+VLGDHV QKGS+V  ++LRFDFSH + + PE L+ +E IVN +I+  
Sbjct: 562 HSATHLLHAALRQVLGDHVQQKGSLVDSQRLRFDFSHFEAIKPEQLKALEDIVNAEIRRN 621

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
            +V ++E  +  AK   G  A+FGE Y D VRV+++G                  S ELC
Sbjct: 622 TEVETEETDIDTAKA-KGAMALFGEKYGDQVRVLSMGG---------------DFSVELC 665

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVT--TGLAY------KAFEAACSLEKEVD 816
           GGTH+S T +   F + SE G+A G+RRI AVT    LAY      +  EAA  ++   D
Sbjct: 666 GGTHVSRTGDIGLFKITSEGGVAAGVRRIEAVTGAAALAYLNGAEEQLKEAAGLVKGSRD 725

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASN--GKPFCISRVEVGLD 874
           +     G+LLE+N   ++ +K  E+   KA   A +   AAA +  G     +R++ GLD
Sbjct: 726 NLLDKLGALLERN---RSLEKELEQLKAKAASAAGDDLSAAAVDIKGAKVLAARLD-GLD 781

Query: 875 AAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPL 934
             A+   V ++  + G  V++    E   K V+ AGV +  D + QL+  E L       
Sbjct: 782 GKALLALVDQLKNKLGRAVILLGG-ELDGKVVLVAGVTQ--DLTGQLKAGE-LMKQAAAA 837

Query: 935 KGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
            G  G G+  +A G GTDAA++  A+ LA  F    L
Sbjct: 838 VGGKGGGRPDMAQGGGTDAAKLDEALALAQRFVEQGL 874


>gi|431798385|ref|YP_007225289.1| alanine--tRNA ligase [Echinicola vietnamensis DSM 17526]
 gi|430789150|gb|AGA79279.1| alanine--tRNA ligase [Echinicola vietnamensis DSM 17526]
          Length = 876

 Score =  627 bits (1617), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 350/793 (44%), Positives = 474/793 (59%), Gaps = 70/793 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R TF ++F+ K H    S+P+V  NDPTL+F NAGMNQ+K  FLG   P T     
Sbjct: 3   AKRIRSTFIEYFQSKQHQFVPSAPIVVKNDPTLMFTNAGMNQFKDYFLGNETPAT----- 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           TRA N+QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI W+WELLT+VY
Sbjct: 58  TRATNSQKCLRVSGKHNDLEEVGVDTYHHTMFEMLGNWSFGDYFKKEAIAWSWELLTEVY 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCK-DNFWEMGDTGPCGP 238
           +LP DRLY T F GDE  GL  D EA D+W   +   R+L FG K DNFWEMGD GPCGP
Sbjct: 118 KLPVDRLYVTVFEGDEGDGLERDMEAFDMWTAHVDKDRIL-FGDKTDNFWEMGDVGPCGP 176

Query: 239 CSEIHYD-RTGNRDAA----SLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTG 293
           CSEIH D RT     A     LVN D P  IE+WN+VFIQFNR+++GSL  LPAKH+DTG
Sbjct: 177 CSEIHIDLRTEEEIKAKPGKELVNADHPQVIEVWNLVFIQFNRQANGSLSELPAKHIDTG 236

Query: 294 LGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADH 353
           +GFERL   +QNK SNYDTDVF P   A+++  G      K G D  +K+D+A RV+ DH
Sbjct: 237 MGFERLVRAIQNKTSNYDTDVFTPFIAAVEKRAGK-----KYGED--EKIDIAIRVIVDH 289

Query: 354 IRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVF 413
           IR +SF IADG  P N    YV+RRILRRAVRYG   L  Q+ F   L+ ++ +  G++F
Sbjct: 290 IRAISFTIADGQLPSNNKAGYVIRRILRRAVRYGYTFLGFQEPFLYELLPLLSEHFGEMF 349

Query: 414 PELKQREAHIREIIAAEEASFGKTL---LKGIEKFKKAAQDVQGKVLSGQDAFILWDTYG 470
           PE+  +E  I ++I  EEA+F +TL   LK +++ K    D   KV+SG+ AF L+DT+G
Sbjct: 350 PEIASQEEFIAKVIYEEEAAFLRTLDNGLKRLDQIKSDLADKGEKVISGKVAFELYDTFG 409

Query: 471 FPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGV 530
           FPLDLT L+A E G+ VD +GF+  M E ++RSR+A  ++ G  + +  +A         
Sbjct: 410 FPLDLTSLIARENGIAVDEKGFDAEMAEQKKRSRAAAEQETGDWVQVSEEANV------- 462

Query: 531 LATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGF 590
                  +F+ + D       I    E  E    G +  +VL  + FYAE GGQ+ D+G 
Sbjct: 463 -------QFVGY-DSLETTSNIIKYREIKEK--KGTKYQLVLEETPFYAESGGQVGDKGV 512

Query: 591 IEGLFGSFYVRNVQIYGGFVIH-IGSLTEG-AGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
           +        V + +     ++H +  L +     F+       KVD  RR L   NHT T
Sbjct: 513 LVSEDEIIKVLDTKKENDLIVHFVEKLPQHPEATFT------AKVDGKRRGLTMNNHTAT 566

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+L+ AL+EVLGDHV QKGS+V  + LRFDFSH   +  + + ++E IVN++I+  + + 
Sbjct: 567 HLLHAALKEVLGDHVQQKGSLVNDQLLRFDFSHFSKLSDDEITQVEHIVNKKIRENIPLL 626

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
            +     E     G  A+FGE Y + VRV+   +               S S ELCGGTH
Sbjct: 627 EQRNVPIEEAKKMGATALFGEKYGEFVRVITFDK---------------SYSVELCGGTH 671

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLA----YKAFEAACSLEKEV----DDASK 820
           +++T +   F ++SE  I+ G+RRI A++   A     +  E   SL++ +    D A  
Sbjct: 672 VASTGKIGLFKIVSEGSISSGVRRIEAISADAAEAYVNEQLEVVKSLQELLKSPKDIAKA 731

Query: 821 IEGSLLEKNQVRK 833
           +E  + E+N+++K
Sbjct: 732 VEALVHERNELKK 744


>gi|429750019|ref|ZP_19283087.1| alanine--tRNA ligase [Capnocytophaga sp. oral taxon 332 str. F0381]
 gi|429166155|gb|EKY08161.1| alanine--tRNA ligase [Capnocytophaga sp. oral taxon 332 str. F0381]
          Length = 879

 Score =  626 bits (1615), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 360/863 (41%), Positives = 502/863 (58%), Gaps = 60/863 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R  F KFFE K H    S+P+V  NDPTL+F NAGMNQ+K  FLG A P     K 
Sbjct: 3   SQEIRQQFLKFFESKGHTIVPSAPMVIKNDPTLMFTNAGMNQFKEFFLGNAKP-----KH 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           TR  +TQKC+R  GKHNDL++VG+DTYHHT FEMLGNWSFGDYFK EAI WAWELLT+VY
Sbjct: 58  TRVVDTQKCLRVSGKHNDLEEVGRDTYHHTMFEMLGNWSFGDYFKKEAISWAWELLTEVY 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           ++P + LY T F G E+ G+  D EA DIW + +    +L    KDNFWEMGD GPCGPC
Sbjct: 118 KIPKEHLYVTVFEGSEEEGVPFDQEAYDIWKERIAEDHILLGNKKDNFWEMGDQGPCGPC 177

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           +EIH D   + + A      LVNND P  IEIWN VF++FNR++DGSL+ LP+K+VDTG+
Sbjct: 178 TEIHVDIRSDEEKAKIAGRDLVNNDHPQVIEIWNNVFMEFNRKADGSLEKLPSKNVDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL  +LQ K SNYDTDVF P+   +++ T ++ Y+G   + + +++++A RV++DHI
Sbjct: 238 GFERLCMVLQKKQSNYDTDVFTPLIQKVEEITKSKYYTGSNVSTEQEQINIAIRVISDHI 297

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R ++FAIADG  P N G  YV+RRILRRA+RYG   L  ++ F   LV  +VK MG  FP
Sbjct: 298 RAVAFAIADGQLPSNNGAGYVIRRILRRAIRYGFTFLNQKEPFIYKLVETLVKQMGGTFP 357

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLD 474
           EL+++   I  +I  EE SF +TL +G+       Q+   K LSG  AF L+DTYGFP D
Sbjct: 358 ELEKQAFIIMSVIKEEENSFLRTLEQGLLMLDVMIQNATNKQLSGVKAFELYDTYGFPKD 417

Query: 475 LTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATD 534
           LT L+  E+GL +D  GF   + + +ERSR+A   +AG  +              VL  D
Sbjct: 418 LTALILSEKGLTLDEAGFEENLQKQKERSRAAAQVKAGDWV--------------VLRED 463

Query: 535 DSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGL 594
           +  +FI +   ++V++ +      +ES   G    +V  ++ FYAE GGQ+ D+G ++  
Sbjct: 464 EEEEFIGYDTLEAVVRLVKYRK--VESQKDGTHYQLVFNTTPFYAEGGGQVGDKGTLQSA 521

Query: 595 FGSF-YVRNVQIYGGFVIHIGS-LTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLN 652
            G   Y+ + +     +IHI   L E     ++ +    +V    R+L   NH+ TH+L+
Sbjct: 522 NGELVYILDTKKENNLIIHIAEHLPE-----NLTDPFKAEVHPLSRQLAEANHSATHLLH 576

Query: 653 FALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEA 712
            ALREVLG HV+QKGS V PE LRFDFSH   +  E L  +E IVN +I  ++ +     
Sbjct: 577 QALREVLGTHVEQKGSRVSPETLRFDFSHFAKLTDEELSEVERIVNRRIWEKIPLQEHRN 636

Query: 713 TLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNT 772
              +     G  A+FGE Y D VR++  G                  S ELCGGTH+ NT
Sbjct: 637 IPIQQAIEAGAMALFGEKYGDHVRMIQFGD-----------------SRELCGGTHVKNT 679

Query: 773 REAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLE-------KEVDDASKIEGSL 825
            +   F +LSE  +A GIRRI A+T G A K F     L        K V D  K    L
Sbjct: 680 GDIWFFKILSEGAVAAGIRRIEAITCGGAMKYFAEQEKLVDNIKTTLKNVQDPIKAIVHL 739

Query: 826 LEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKV 885
            E+N     + ++ ++   K +KV+ +  E A+ NG    I +++  LD   +++   ++
Sbjct: 740 QEENAQLHKELELLKKEQAKNLKVSLKN-EFASINGVQCLIKQLD--LDTTTLKDLAFQL 796

Query: 886 IEQKGMPVMVFSTDETTNKAVVC 908
             +   P ++F +       ++C
Sbjct: 797 GNEVENPFVLFGSAYEGKALLLC 819


>gi|327402220|ref|YP_004343058.1| alanyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
 gi|327317728|gb|AEA42220.1| alanyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
          Length = 871

 Score =  625 bits (1613), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 350/842 (41%), Positives = 482/842 (57%), Gaps = 74/842 (8%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  FF FF  K H    S+P+V  NDPTL+F NAGMNQ+K  FLG A P  +     R
Sbjct: 5   EIRKQFFDFFASKGHQIVPSAPMVVKNDPTLMFTNAGMNQFKDFFLGNAVPKNR-----R 59

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
             N+QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWELLT+VY++
Sbjct: 60  VANSQKCLRVSGKHNDLEEVGVDTYHHTMFEMLGNWSFGDYFKEEAITWAWELLTEVYKI 119

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPCSE 241
           P DRLY T F GDEK G+  D E+ DIW +F+   R++    KDNFWEMGDTGPCGPC+E
Sbjct: 120 PKDRLYVTVFEGDEKDGVPKDQESYDIWKRFIAEDRIIMASKKDNFWEMGDTGPCGPCTE 179

Query: 242 IHYD-----RTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGF 296
           IH D          D    VN D P  IEIWN VF+QFNR++DGSL+PLPA HVDTG+G 
Sbjct: 180 IHVDNRPATERAKEDGKKYVNEDHPQVIEIWNNVFMQFNRKADGSLEPLPATHVDTGMGL 239

Query: 297 ERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRT 356
           ERL   LQ+K SNYD D+F  +   ++Q +G      K G ++    D+A RV+ADH+R 
Sbjct: 240 ERLAMTLQDKTSNYDIDLFQTLIQHMEQVSGK-----KYGENET--TDIALRVIADHVRA 292

Query: 357 LSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPEL 416
           ++F+IADG  P N G  YV+RRILRRAVRYG + L  ++ F +GL  ++ KVMGD F EL
Sbjct: 293 IAFSIADGQLPSNTGAGYVIRRILRRAVRYGYQTLGLKEPFLSGLSVVLGKVMGDPFSEL 352

Query: 417 KQREAHIREIIAAEEASFGKTLLKGIEKFKK---AAQDVQGKVLSGQDAFILWDTYGFPL 473
            ++   + ++I  EE SF +TL +G+++       A+  +  +L G   F L+DT+GFP+
Sbjct: 353 IKQGELVEKVIREEELSFFRTLEQGLKRMDNLIAQARKTRETILQGPAVFELYDTFGFPI 412

Query: 474 DLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLAT 533
           DLT L+A E  LLVD +GF+  + + + RSR+A + +    +V+  D+         L T
Sbjct: 413 DLTSLIARENKLLVDEDGFDTELQKQKARSRAATSIETDDWVVLKKDSEEEFVGYDHLTT 472

Query: 534 DDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEG 593
             + + + ++  K   ++ Y                +V   + FYAE GGQ+ D G I  
Sbjct: 473 --TVEIVKYRKVKQKQRSFYQ---------------LVFNLTPFYAEGGGQVGDTGTISN 515

Query: 594 LFGSFYVRNVQIYGGFVIH-IGSLTEGA-GRFSVGEEVICKVDYDRRKLIAPNHTCTHML 651
              S  + + +   G ++H +  L E   G+F+       +V+ + R+L A NH+ TH+L
Sbjct: 516 ANESLTIFDTKKENGLIVHLVDELPEKIDGQFT------ARVNEESRRLSASNHSATHLL 569

Query: 652 NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKE 711
           + ALR VLG HV+QKGS+V P  LRFDFSH   V  E + +IE+IV + I+  L +    
Sbjct: 570 HHALRTVLGAHVEQKGSLVNPNYLRFDFSHFSKVTDEEMAKIEAIVIDGIRQNLSLEESR 629

Query: 712 ATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSN 771
               +A    G  A+FGE Y D VRV+  G                  S ELCGGTH+ N
Sbjct: 630 NVPIDAAQEMGAMALFGEKYGDTVRVIKFGD-----------------SIELCGGTHVQN 672

Query: 772 TREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEA--------ACSLEKEVDDASKIEG 823
           T +   F + SE  +A GIRRI A+T  +A + + A           L K   D SK   
Sbjct: 673 TGQIGLFKIQSESAVAAGIRRIEAITN-VAVEGYYADQESKLKSVNELLKNPKDVSKAVE 731

Query: 824 SLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVL 883
            L+ KN   + QK+V     + A  V  +      S G  F      + L+A +V++ + 
Sbjct: 732 DLISKNN--QLQKQVENFKKEHAKLVKADLKTKIISKG-DFSYLDALIDLNAGSVKDILF 788

Query: 884 KV 885
           ++
Sbjct: 789 QL 790


>gi|404449183|ref|ZP_11014174.1| alanyl-tRNA ligase [Indibacter alkaliphilus LW1]
 gi|403765287|gb|EJZ26169.1| alanyl-tRNA ligase [Indibacter alkaliphilus LW1]
          Length = 875

 Score =  625 bits (1611), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 370/872 (42%), Positives = 499/872 (57%), Gaps = 77/872 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R TF +FF+ K H   KSSP+V  NDPTL+F NAGMNQ+K  FLG    N Q +K+
Sbjct: 3   AKQIRSTFIEFFKSKQHQFVKSSPIVVKNDPTLMFTNAGMNQFKDFFLG----NEQ-AKV 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           TR  N+QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAIEWAWELLT V+
Sbjct: 58  TRVANSQKCLRVSGKHNDLEEVGVDTYHHTMFEMLGNWSFGDYFKKEAIEWAWELLTDVF 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +LP DRLY + FGGD + GL  D EA D+W   +   R+L    KDNFWEMGDTGPCGPC
Sbjct: 118 KLPQDRLYVSVFGGDVEDGLEQDKEAFDLWKGIVSEDRILFGSKKDNFWEMGDTGPCGPC 177

Query: 240 SEIHYDRTGN--RDAAS---LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D   N  R A S   LVNND P  IEIWN+VF+QFNR SDGSLK LPAKHVDTG+
Sbjct: 178 SEIHIDLRSNEERKAQSGYDLVNNDHPQVIEIWNLVFMQFNRLSDGSLKELPAKHVDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   +Q K SNYDTD+F P    ++  +G + Y       + +K+D+A RV+ DHI
Sbjct: 238 GFERLVRAIQQKPSNYDTDIFTPFIAQLESKSG-KTYG------ENEKIDIAMRVIVDHI 290

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R ++F IADG  P N    YV+RRILRRAVRYG   L  Q  F   L+ ++ +  G++FP
Sbjct: 291 RAIAFTIADGQLPSNNKAGYVIRRILRRAVRYGYTFLGFQKPFIFELMPLLAENFGEIFP 350

Query: 415 ELKQREAHIREIIAAEEASFGKTL---LKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGF 471
           E+  +E  I ++I  EEASF +TL   LK +E+ K+       +++SG+ AF L+DTYGF
Sbjct: 351 EVASQEDFITKVIMEEEASFLRTLDNGLKKLEQIKEELSQKHDRIISGKVAFELYDTYGF 410

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT L+A E GL VD +GF   M++ + RSR+A  ++ G  + + A+          L
Sbjct: 411 PLDLTSLIARENGLSVDEKGFAVEMEKQKTRSRAAAEQETGDWVAVRAEEGVEFIGYDFL 470

Query: 532 ATDDSF-KFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGF 590
            +  +  K+   +D K                  G+   IVL  + FYAE GGQ+ D+G+
Sbjct: 471 TSQSNITKYRKIKDKK------------------GDRFQIVLDKTPFYAESGGQVGDQGW 512

Query: 591 IEGLFGSFYVRNVQIYGGFVIH-IGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
           ++    S  V + +     ++H +  L + A      E     VD  +RK    NHT TH
Sbjct: 513 LKSDQESIRVLDTKKENDLIVHFVDKLPKDASATFYSE-----VDAGKRKASMNNHTATH 567

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +L+ AL++VLG+HV QKGS+V  E LRFDFSH   +  E +  +E+IVN +I+  + +  
Sbjct: 568 LLHAALKQVLGEHVQQKGSLVNEELLRFDFSHFAKMTEEEIAEVEAIVNAKIRENIALDE 627

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
           +     +     G  A+FGE Y D VRV+   +                 S ELCGGTH+
Sbjct: 628 QRNIPIDEAKKQGATALFGEKYGDFVRVITFDK---------------GFSVELCGGTHV 672

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK--------I 821
             T     F ++SE  I+ G+RRI A+T   A    +   +L +E+ +  K        +
Sbjct: 673 QATGMIGLFKIVSEGSISAGVRRIEAITGKGAENYIQGQLNLIREIQEMLKNPRDLKKSL 732

Query: 822 EGSLLEKNQVRK-------AQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLD 874
           E  L+E+N ++K        Q  V + +L K VK        AAS   P   +  ++  +
Sbjct: 733 ESLLVERNDLKKEIESLHSKQAGVLKADLIKTVKEVNGYKFIAASVTLPSADALKKLAFE 792

Query: 875 AAAVREAVLKVI--EQKGMPVMVFSTDETTNK 904
                E +L VI  +  G P +    DE   K
Sbjct: 793 LKNELENLLAVIAADIDGKPQIAVIIDEALVK 824


>gi|404404277|ref|ZP_10995861.1| alanyl-tRNA ligase [Alistipes sp. JC136]
          Length = 873

 Score =  625 bits (1611), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 363/809 (44%), Positives = 467/809 (57%), Gaps = 101/809 (12%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + K+R  F  FFE K HV   S+P+V   DPTL+F NAGMNQ+K IFLG A       K 
Sbjct: 3   SNKIRQAFLDFFESKGHVIVPSAPMVVKGDPTLMFTNAGMNQFKDIFLGNAP-----RKY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            RA +TQKC+R  GKHNDL++VG DTYHHT FEMLGNWS+GDYFK EAIEWAWELL  VY
Sbjct: 58  PRAADTQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSYGDYFKKEAIEWAWELLHDVY 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +LPA+R+YAT F G E+ G+  D EA D W +FLP   ++     DNFWEMG+TGPCGPC
Sbjct: 118 KLPAERMYATVFEGSEEDGVPFDQEAYDYWKQFLPEDHIIRGNKHDNFWEMGETGPCGPC 177

Query: 240 SEIHYDRTGNRDAA-----SLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH+D     + A      +VN   P  IEIWN+VF+QFNR+++GSL+ LPA++VDTG+
Sbjct: 178 SEIHFDLRDEAEVALKPGREMVNASHPQVIEIWNLVFMQFNRKANGSLEELPARNVDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL  ILQ K SNYDTDVF P    I         SGK   +DA K D+A RV+ADH+
Sbjct: 238 GFERLCMILQGKKSNYDTDVFQPTIGRIA------AMSGKKYGEDA-KADVAMRVIADHL 290

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R ++F+IADG  P N    YV+RRILRRAVRYG   L   +     LV  +V+ MG  FP
Sbjct: 291 RAIAFSIADGQLPSNVKAGYVIRRILRRAVRYGYTYLGFTEPTLCKLVPGLVEQMGGQFP 350

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGI-------EKFKKAAQDVQGKVLSGQDAFILWD 467
           ELK ++  I ++I  EE+SF +TL  GI       E+ KK  ++     +SG+DAF L+D
Sbjct: 351 ELKAQQGLIEKVIEEEESSFLRTLATGINLLDGVIERTKKEGREF----ISGRDAFELYD 406

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
           T+GFP+DLT+L+A E+G+ VD+  F   +   +ERSR+A                     
Sbjct: 407 TFGFPIDLTELIAREQGVGVDLAAFEKELQAQKERSRNA--------------------- 445

Query: 528 RGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVP-----------GNEVGIVLASSS 576
              + TDD  + I       + ++++TG + +   V                 +V   + 
Sbjct: 446 -AAVDTDDWVELI------PIKESVFTGYDTLTEKVRIARYRRVTSKGKTSYQLVFDRTP 498

Query: 577 FYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHI-GSLTEGAGRFSVGEEVICKVDY 635
           FY   GGQI D GFIE       V   +   G +IHI G L E         E   KVD 
Sbjct: 499 FYGNSGGQIGDIGFIESANERIPVVATEKENGLIIHIVGELPENPA-----AEFTAKVDP 553

Query: 636 DRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIES 695
           ++R+  A NHT TH+++ ALR+VLG HV+QKGS+V PE LRFDFSH + V PE LR +E 
Sbjct: 554 EKRQAAANNHTATHLMHEALRKVLGSHVEQKGSMVTPEILRFDFSHFQKVTPEELREVER 613

Query: 696 IVNEQIKAELDV-FSKEATLAEA-KCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPEN 753
           +VN  ++A   +  ++EAT  EA KC  G   +FGE Y D VR+V  G            
Sbjct: 614 LVNRAVRANYPLEENREATKEEAEKC--GAMMLFGEKYGDKVRMVRFGS----------- 660

Query: 754 KEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEK 813
                 S ELCGGTH S T     F +LSE  I+ G+RRI AVT   A K   AA     
Sbjct: 661 ------SVELCGGTHTSATGNIGFFKILSESAISAGVRRIEAVTGEQAEKIIYAA----- 709

Query: 814 EVDDASKIEGSLLEKNQVRKAQKKVAEEN 842
             +D  +     L   QV +A KK+ E N
Sbjct: 710 --EDTMRNVAEYLNNPQVVQAVKKMLESN 736


>gi|385808621|ref|YP_005845017.1| alanyl-tRNA synthetase [Ignavibacterium album JCM 16511]
 gi|383800669|gb|AFH47749.1| Alanyl-tRNA synthetase [Ignavibacterium album JCM 16511]
          Length = 862

 Score =  624 bits (1609), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 377/921 (40%), Positives = 525/921 (57%), Gaps = 73/921 (7%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R  F  FF  K+H    SSPVVP +DPTLLF NAGMNQ+K +FLGT        + 
Sbjct: 3   SQEIRQQFLDFFRSKDHRIVPSSPVVPFDDPTLLFTNAGMNQFKDVFLGTG-----TREY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            RA NTQKCIR  GKHNDL++VG DTYHHTFFEMLGNWSFGDY+K EAI WAWELLT+V+
Sbjct: 58  KRAANTQKCIRVSGKHNDLEEVGHDTYHHTFFEMLGNWSFGDYYKKEAIMWAWELLTEVW 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF--LPASRVLPFGCKDNFWEMGDTGPCG 237
           RLP +RL+AT +          D+EA ++W +   +    +L FG KDNFWEMGDTGPCG
Sbjct: 118 RLPKERLWATVY--------KDDDEAFELWKQVTDINPKHILRFGEKDNFWEMGDTGPCG 169

Query: 238 PCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFE 297
           PCSEIH + + + D  S VN   P CIEIWN+VFIQ+NR+  G L  LPAKHVDTG+GFE
Sbjct: 170 PCSEIHINLSDDYDNPSYVNAGTPECIEIWNLVFIQYNRDETGKLHELPAKHVDTGMGFE 229

Query: 298 RLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTL 357
           R+ ++LQNK SNYDTD+FMP+ D I +       SG    ++ DK+ M  RV+ADHIR L
Sbjct: 230 RVCAVLQNKSSNYDTDIFMPLIDEIVK------LSGVTYKNEEDKIPM--RVIADHIRAL 281

Query: 358 SFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELK 417
           +FAIADG+ PGNEGR YVLRRILRRA RYG ++   ++ F   LV+++V  MG VF E+K
Sbjct: 282 TFAIADGAVPGNEGRGYVLRRILRRAARYGRKI-NLKEPFLFKLVDVLVSTMGSVFTEIK 340

Query: 418 QREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG---KVLSGQDAFILWDTYGFPLD 474
           +++ +++++I AEE SF  TL +GIE F+   + +     K++ G+D F L+DTYGFP+D
Sbjct: 341 EKQDYVKKVIKAEEESFNATLDRGIELFEDVVRRLNKNNQKIIPGEDVFKLYDTYGFPVD 400

Query: 475 LTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATD 534
           LT LMA E G  VD  GFN  M+  R+++R A  ++     V+  D ++       +  +
Sbjct: 401 LTSLMAREIGFSVDEAGFNKLMEAQRKKAREASKEKFASVNVVLTDLSSF-----NITDN 455

Query: 535 DSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGL 594
              +F  + + KS  K I    E       GN   I+L  + FY E GGQI D G I   
Sbjct: 456 KQVEFTGYDELKSEAKIIGIKKE-------GNTNLIILDRTPFYVEAGGQIDDTGKILAP 508

Query: 595 FGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFA 654
                + +V      +IHI S    A     G +VI +VD +RR  I  NH+ TH L+ A
Sbjct: 509 SAEIEIVDVAKVENAIIHI-SENSFAESLKPGMQVIAEVDENRRWDIMRNHSATHFLHKA 567

Query: 655 LREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD-VFSKEAT 713
           LR +LG HV Q GS V P++LRFDF+H   + PE +  IE++VNEQ++  L  +  +   
Sbjct: 568 LRTILGTHVQQAGSYVGPDRLRFDFTHFAKLSPEEIYDIETLVNEQLRRNLPLIHHRNIP 627

Query: 714 LAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTR 773
             EAK +  L   FG+ Y D V VV  G                  + E CGGTH+ N+ 
Sbjct: 628 FEEAKKMGAL-MFFGDKYGDRVNVVQFG----------------DFTMEFCGGTHVKNSS 670

Query: 774 EAEAFALLSEEGIAKGIRRITAVTTG----LAYKAFEAACSLEKEVDDASKIEGSLLEKN 829
           +   F ++SE+ IA G+RRI AVT        Y   E     EK++++   ++  L ++ 
Sbjct: 671 QIGLFKIISEQSIASGVRRIEAVTGAGVERYIYTQLEHLKESEKKIEELLDVKKKLEKEI 730

Query: 830 QVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQK 889
              K ++K+  E L   + + +E +      GK    +  E+      +R  +       
Sbjct: 731 SELKMREKI--EQLDHILSLHSEESGVKIYKGKVHADNMDELKSLGDELRNKM-----GS 783

Query: 890 GMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQ 949
           G+ +++    +  +K  + A V +   + K L   + +   L  L G  G G+  LA+  
Sbjct: 784 GVGILI---SQIEDKVGIVAVVSDDLIKKKNLSAGK-IVGELAKLVGGGGGGRPHLATAG 839

Query: 950 GTDAAQVTPAMDLAAEFAAMK 970
           G D   +T A+    E  + +
Sbjct: 840 GKDIKAITKALAKVEEIVSQQ 860


>gi|375148923|ref|YP_005011364.1| alanyl-tRNA synthetase [Niastella koreensis GR20-10]
 gi|361062969|gb|AEW01961.1| alanyl-tRNA synthetase [Niastella koreensis GR20-10]
          Length = 879

 Score =  624 bits (1609), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 370/918 (40%), Positives = 517/918 (56%), Gaps = 64/918 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R  F +FF +K H    S+P+V  NDPTLLF NAGMNQ+K  FLG      + +  
Sbjct: 4   SAEIRQLFMEFFRNKGHEIVPSAPIVVKNDPTLLFTNAGMNQFKDYFLGN-----KKAPF 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  +TQKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI W+WELLT+VY
Sbjct: 59  PRVADTQKCLRVSGKHNDLEEVGVDTYHHTMFEMLGNWSFGDYFKKEAIAWSWELLTEVY 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           ++P DRLY TYF GD    LA D EA + W KF+   R+LP   KDNFWEMGDTGPCGPC
Sbjct: 119 KIPKDRLYVTYFQGDTAENLAKDEEAFNEWSKFVAPDRILPGNKKDNFWEMGDTGPCGPC 178

Query: 240 SEIHYD-----RTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D         +  A LVNND P  IEIWN VF+QFNR+ DGSL+PLPAKHVDTG+
Sbjct: 179 SEIHVDCRSDEERKQQSGAELVNNDHPQVIEIWNNVFMQFNRKKDGSLEPLPAKHVDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGAR--PYSGKVGADDADKVDMAYRVVAD 352
           GFERL  +LQ+K SNYD+D+F     AI+     +  P + +  + D  K  +A+RV+AD
Sbjct: 239 GFERLVRVLQSKQSNYDSDIFTGTIAAIETIAKKKYDPNTPQSTSADWHKA-VAFRVLAD 297

Query: 353 HIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDV 412
           HIR +SF IADG  P N G  YV+RRILRRAVRY    L  +    + LV ++      V
Sbjct: 298 HIRAISFTIADGQLPSNTGAGYVIRRILRRAVRYYYTFLDYKQPLLHQLVPVLATQFQTV 357

Query: 413 FPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFP 472
           FPEL+Q++  + ++I  EE +F +TL KG++K  +     + KV++G  AF L+DTYGFP
Sbjct: 358 FPELQQQQDFVAKVIKEEEDAFLRTLEKGLKKIDEIIGSAKNKVVNGSAAFELYDTYGFP 417

Query: 473 LDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLA 532
           +DLT+L+A E  L VD +GF   M++ ++R+R+A    A   +V++ ++           
Sbjct: 418 IDLTRLIARENNLEVDEDGFKAEMNQQKDRARAATAISAEDWVVLNENSNTG-------- 469

Query: 533 TDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPG-NEVGIVLASSSFYAEQGGQIFDEG-- 589
                 FI +   ++  K I    ++ +    G     +VL ++ FYAE GGQ+ D G  
Sbjct: 470 ------FIGYDHTQAEAKVI----KYRKVTAKGKTSFQLVLNTTPFYAESGGQVGDTGAL 519

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
           F EG      V + +     +IH           ++   V  ++D  RR   A +H+ TH
Sbjct: 520 FFEG--EEVAVIDTKKENDLIIHFVEKLP----INITGIVDARIDTIRRARTAVHHSATH 573

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +L+ ALR+VLG HV QKGS+V  E LRFDFSH   +  + + ++E++VNE+I+A + V  
Sbjct: 574 LLHAALRKVLGTHVAQKGSLVNDEYLRFDFSHFAKMTTDEITKVEALVNEKIRANIPVVI 633

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
           KE    EA  + G  A+FGE Y D VRVV         + DP      + S ELCGGTH+
Sbjct: 634 KELPKEEALKL-GAMALFGEKYGDVVRVV---------IMDP------AYSVELCGGTHV 677

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKN 829
             T E   F +  E  +A G+RRI A++   A +          +V +  K    LL+  
Sbjct: 678 GATGELGLFKIKHETAVAAGVRRIEAISGLAAEQYITEQLGQLHQVKEELKSPADLLKAV 737

Query: 830 QVRKAQK---KVAEENLQKAVKVATETA---EAAASNGKPFCISRVEVGLDAAAVREAVL 883
           Q   A     K   E+L+  + V        +    NG  F  + VEVG +A A+++   
Sbjct: 738 QNLAADNSDLKKKLEHLENRILVGVRNELLHKDEIINGVTFVGAIVEVG-NADALKKLCF 796

Query: 884 KVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKG 943
            +       V+V  ++    K  V  G+ +    ++ L+  + +   + PL    G G+ 
Sbjct: 797 DMKGHLNDHVIVLCSN-IGGKPFVAVGIADTVAAARSLDAGKIIKEHIAPLIKGGGGGQK 855

Query: 944 GLASGQGTDAAQVTPAMD 961
            LA+  G DA+ +   +D
Sbjct: 856 TLATAGGQDASNLQQVID 873


>gi|409198079|ref|ZP_11226742.1| alanyl-tRNA ligase [Marinilabilia salmonicolor JCM 21150]
          Length = 877

 Score =  624 bits (1608), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 373/935 (39%), Positives = 520/935 (55%), Gaps = 84/935 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A++VR  FF FF+ K HV   S+P+V  NDPTL+F NAGMNQ+K IFLG  +P       
Sbjct: 3   ASEVRQKFFDFFKSKEHVIVPSAPMVVKNDPTLMFTNAGMNQFKDIFLGNREPAA----- 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  + QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI+WAWE LT   
Sbjct: 58  PRVADAQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAIDWAWEFLTGEL 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
            +  +RLYAT F GD   G+  D EA   W ++LP  R+L    KDNFWEMG++GPCGPC
Sbjct: 118 NVDKERLYATVFEGDASDGVERDEEAAQCWQQYLPEERILNGNKKDNFWEMGESGPCGPC 177

Query: 240 SEIHYDRTGNRD-----AASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     +        LVN D P  IEIWN+VFIQ+NR+S G L  LP KHVDTG+
Sbjct: 178 SEIHIDLRSEEERLKKGGHELVNKDHPEVIEIWNLVFIQYNRKSSGELTSLPQKHVDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL  +LQ K SNYDTD+F+P+   I   T       K GA  ++  D+A RV+ADHI
Sbjct: 238 GFERLCRVLQKKSSNYDTDIFLPLIQQIASLTNV-----KYGA--SNDGDVAMRVIADHI 290

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++F+IADG  P N    YV+RRILRRAVRY    L  +  F +GL+ +++ VMGD +P
Sbjct: 291 RTIAFSIADGQLPSNNKAGYVIRRILRRAVRYAYTFLNVRKPFLSGLLPVLIDVMGDAYP 350

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKK-AAQDVQG--KVLSGQDAFILWDTYGF 471
           ELK ++  I+++I  EE SF KTL  GI    K  A+ ++G  KV+ G+ AF L+DT+GF
Sbjct: 351 ELKSQKELIQKVIHEEEESFLKTLATGIALLDKIIAETLKGEYKVVDGKVAFELYDTFGF 410

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E+GL+V+   F   M+  + R+R+A   + G  +              VL
Sbjct: 411 PLDLTELILSEKGLVVNRREFEKEMEAQKSRARNASAVETGDWV--------------VL 456

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
             D   +F+ +  H++    +Y        V    +  +V   + FYAE GGQ+ D G I
Sbjct: 457 RDDKEEEFVGYDYHET---EVYITRYRQVKVKNKEQYQLVFNITPFYAESGGQVGDSGII 513

Query: 592 EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICK--VDYDRRKLIAPNHTCTH 649
                   + + +     +IHI      A +    +E   K  V+ ++R+  A NHT TH
Sbjct: 514 TSEEEKIEIIDTKKENDLIIHI------AKKLPANQEAAFKATVNVEKRRRAASNHTATH 567

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +L+ ALR +LGDHV+QKGS+V P+ LRFDF+H + V PE +R++E +VN +I+A + V  
Sbjct: 568 LLHKALRAMLGDHVEQKGSLVHPDYLRFDFAHFQKVTPEEIRQVEKMVNAEIRANIQVEE 627

Query: 710 -KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
            +E  L +A+ + G  A+FGE Y D VR +  G                  S ELCGGTH
Sbjct: 628 HREVPLEKAREM-GAMALFGEKYGDVVRTIGFGD-----------------SVELCGGTH 669

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEK 828
           +  T E   F ++SE  ++ GIRRI AV+   A +A E   S   + D   +I G +  K
Sbjct: 670 VHATGEIGFFRIISEGSVSAGIRRIEAVS---ADRAEELVYS---QSDVLEEIAGLVKSK 723

Query: 829 NQVRKAQKKVAEEN----------LQKAVKVATETAEAAAS--NGKPFCISRVEVGLDAA 876
            ++RK+ + +  +N          +Q  +++  ++    A   NG    I +V+  L   
Sbjct: 724 GELRKSIESLISQNSRLTKDLEGMMQNFLRIEKQSVIDGAENVNGVSVIIRQVKPELGGN 783

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
               A     +  G  V V  + E   K  +   + +   ++  L   E + +  Q +KG
Sbjct: 784 LKDLAFQLRNDLDGEMVAVLGS-EVNGKPQLAVILSDSLAENGTLNAVELIRSVAQEIKG 842

Query: 937 RCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
             G G+   AS  G + A +  A+  A      KL
Sbjct: 843 -GGGGQPFFASAGGKNPAGLDSALSKAKALIEEKL 876


>gi|51102330|gb|AAT95878.1| alanyl-tRNA synthetase [Naegleria gruberi]
          Length = 614

 Score =  622 bits (1604), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 317/617 (51%), Positives = 412/617 (66%), Gaps = 12/617 (1%)

Query: 154 LGNWSFGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL 213
           LGNWSFGDYFK EAI WAWELLT+VY L  DRLY TYFGG+EK  L  D EA+ IW +F+
Sbjct: 1   LGNWSFGDYFKREAITWAWELLTEVYGLEKDRLYVTYFGGNEKLNLPADEEAKQIWGQFV 60

Query: 214 PASRVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQ 273
           P   +LP   KDNFWEMGDTGPCGPCSEIHYDR G R+AA LVN DDP  +EIWN VF++
Sbjct: 61  PDDHILPGSMKDNFWEMGDTGPCGPCSEIHYDRIGGRNAAHLVNMDDPNVLEIWNNVFME 120

Query: 274 FNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSG 333
           FNR+ D +L+ LPAKHVDTG+G ERL SILQNKMSNYDTDVFMPIF+AIQ+ TG+RPY+G
Sbjct: 121 FNRKEDQTLEYLPAKHVDTGMGLERLVSILQNKMSNYDTDVFMPIFEAIQKETGSRPYTG 180

Query: 334 KVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKA 393
           K+GA+D D +D AYRV+ADHIRTL  A++DG  P N GR YVLRRI+RRAVR+G E + A
Sbjct: 181 KLGAEDVDHIDTAYRVIADHIRTLVIALSDGGYPDNTGRGYVLRRIVRRAVRFG-EFMNA 239

Query: 394 QDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ 453
           + GF   L + VV++MGD FPELK+    + E+I +EE  F KTL  G++ F + A+ ++
Sbjct: 240 KKGFLTRLASCVVELMGDFFPELKKNSEKVEELIQSEEVLFAKTLRVGLKFFNRIAEKMK 299

Query: 454 GK---VLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQ 510
                V+SG DAF L+ TYGFP+DLT +MA+E+G+ VD+  +   M+  +  + S   KQ
Sbjct: 300 SNGESVVSGPDAFKLYATYGFPVDLTLIMAQEQGMTVDMVEYKKEME--KHATASQGTKQ 357

Query: 511 AGGAIVMDADATAALHKR-GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNE-- 567
               + +    T  L     +  T D  K++W      V+      S F+E +    E  
Sbjct: 358 EATDMKLGVIETDKLQNELKIEPTQDDIKYVWENIQAKVVAIFSESSGFVEELNTECEEV 417

Query: 568 -VGIVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEG--AGRFS 624
            +GI+L  ++FYAE GGQ  D G +        V NVQ + G+++HI +++E   AG  +
Sbjct: 418 NIGIILDQTNFYAEGGGQAPDNGVLRIGETELKVVNVQKFAGYILHIVNVSESKLAGNVT 477

Query: 625 VGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKP 684
           VG  V  +V+Y+RR+ IA NHT THMLNFALR+VLG   DQ+GS+V  E+L FDFS  K 
Sbjct: 478 VGTTVSSEVNYERREPIAANHTSTHMLNFALRKVLGTDCDQQGSIVKEEELCFDFSAAKA 537

Query: 685 VDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKV 744
              E +  +E IVN+ I A+  VFSK      A  INGLRA+F   Y + VRVV+IG+  
Sbjct: 538 PSVEQVAEVEKIVNDLIVADHPVFSKVQERDAAYEINGLRAMFSANYGEQVRVVSIGQDS 597

Query: 745 EDLLADPENKEWLSISA 761
           + ++ D  N++W  IS 
Sbjct: 598 DSIMTDRSNEKWRLISV 614


>gi|421182099|ref|ZP_15639583.1| alanyl-tRNA synthetase [Pseudomonas aeruginosa E2]
 gi|404542634|gb|EKA51947.1| alanyl-tRNA synthetase [Pseudomonas aeruginosa E2]
          Length = 874

 Score =  622 bits (1604), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 387/939 (41%), Positives = 535/939 (56%), Gaps = 94/939 (10%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F +FFE+K H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLRFFEEKGHTRVASSSLIPANDPTLLFTNAGMNQFKDCFLGL-----EKRAY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           TRA  +QKC+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT  K
Sbjct: 58  TRATTSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWEFLTGEK 117

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFW 228
              LP ++L+ T +        A D+EA DIW K   +PA R++  G         DNFW
Sbjct: 118 WLNLPKEKLWVTVY--------ATDDEAYDIWTKEVGVPAERMVRIGDNKGAPYASDNFW 169

Query: 229 EMGDTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKP 284
            MGDTGPCGPC+EI +D      G    +     D    IEIWN VF+QFNR +DG + P
Sbjct: 170 AMGDTGPCGPCTEIFFDHGPEIWGGPPGSP--EEDGDRYIEIWNNVFMQFNRTADGVMHP 227

Query: 285 LPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVD 344
           LPA  VDTG+G ER++++LQ+  SNY+ D+F  +  A  +A G          DDA  + 
Sbjct: 228 LPAPSVDTGMGLERVSAVLQHVHSNYEIDLFQNLLKASAEAIG-------CANDDAPSL- 279

Query: 345 MAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNI 404
              +VVADHIR+ SF IADG  P NEGR YVLRRI+RRA R+G++ L A+  FF+ +V  
Sbjct: 280 ---KVVADHIRSCSFLIADGVLPSNEGRGYVLRRIIRRACRHGNK-LGARGTFFHKIVAA 335

Query: 405 VVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFI 464
           +V  MGD FPELKQ++AHI  ++  EE  F KTL +G++  ++   ++QG V+ G   F 
Sbjct: 336 LVTEMGDAFPELKQQQAHIERVLKTEEEQFAKTLEQGLKILEQDLAELQGSVIPGNVVFK 395

Query: 465 LWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAA 524
           L+DTYGFP+DLT  +A ER L +D +GF   M+  RER+R      A  A  MD ++   
Sbjct: 396 LYDTYGFPVDLTNDIARERELTIDEDGFEREMEAQRERAR------ASSAFGMDYNS--- 446

Query: 525 LHKRGVLATDDSFKFIWFQDHKSV--IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQG 582
                ++  D   +F+ +Q       I A++   + +E +  G E  +VL  + FYAE G
Sbjct: 447 -----LVKVDGETRFLGYQGVSGAGQIVALFRDGQAVERLEEGEEGVVVLDQTPFYAESG 501

Query: 583 GQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIA 642
           GQ+ D G++E     F VR+    GG  +H G +    G  SVG  V  +VD   R+  A
Sbjct: 502 GQVGDSGYLEAAGVRFDVRDTTKAGGAHLHHGVVAR--GNLSVGGAVKAEVDASVRQATA 559

Query: 643 PNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIK 702
            NH+ TH+L+ ALR+VLGDHV QKGS+V  ++LRFDFSH + +  E L+ +E IVN +I+
Sbjct: 560 LNHSATHLLHAALRQVLGDHVQQKGSLVDSQRLRFDFSHFEAIKAEQLKALEDIVNAEIR 619

Query: 703 AELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAE 762
              +V ++E  +  AK   G  A+FGE Y D VRV+++G                  S E
Sbjct: 620 RNTEVETEETDIDTAKA-KGAMALFGEKYGDQVRVLSMGG---------------DFSVE 663

Query: 763 LCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVT--TGLAY------KAFEAACSLEKE 814
           LCGGTH+S T +   F + SE G+A G+RRI AVT    LAY      +  EAA  ++  
Sbjct: 664 LCGGTHVSRTGDIGLFKITSEGGVAAGVRRIEAVTGAAALAYLNGAEEQLKEAASLVKGS 723

Query: 815 VDDASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAAS--NGKPFCISRVEVG 872
            D+     G+LLE+N   ++ +K  E+   KA   A +   AAA    G     +R++ G
Sbjct: 724 RDNLLDKLGALLERN---RSLEKELEQLKAKAASAAGDDLSAAAVEIKGAKVLAARLD-G 779

Query: 873 LDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQ 932
           LD  A+   V ++  + G  V++    E   K V+ AGV +  D + QL+  E L     
Sbjct: 780 LDGKALLALVDQLKNKLGRAVILLGG-ELDGKVVLVAGVTQ--DLTGQLKAGE-LMKQAA 835

Query: 933 PLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
              G  G G+  +A G GTDAA++  A+ LA  F    L
Sbjct: 836 AAVGGKGGGRPDMAQGGGTDAAKLDEALALAQRFVEQGL 874


>gi|421169729|ref|ZP_15627735.1| alanyl-tRNA synthetase [Pseudomonas aeruginosa ATCC 700888]
 gi|404525714|gb|EKA35966.1| alanyl-tRNA synthetase [Pseudomonas aeruginosa ATCC 700888]
          Length = 874

 Score =  622 bits (1604), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 387/939 (41%), Positives = 535/939 (56%), Gaps = 94/939 (10%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F +FFE+K H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLRFFEEKGHTRVASSSLIPANDPTLLFTNAGMNQFKDCFLGL-----EKRAY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           TRA  +QKC+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT  K
Sbjct: 58  TRATTSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWEFLTGEK 117

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFW 228
              LP ++L+ T +        A D+EA DIW K   +PA R++  G         DNFW
Sbjct: 118 WLNLPKEKLWVTVY--------ATDDEAYDIWTKEVGVPAERMVRIGDNKGAPYASDNFW 169

Query: 229 EMGDTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKP 284
            MGDTGPCGPC+EI +D      G    +     D    IEIWN VF+QFNR +DG + P
Sbjct: 170 AMGDTGPCGPCTEIFFDHGPEIWGGPPGSP--EEDGDRYIEIWNNVFMQFNRTADGVMHP 227

Query: 285 LPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVD 344
           LPA  VDTG+G ER++++LQ+  SNY+ D+F  +  A  +A G          DDA  + 
Sbjct: 228 LPAPSVDTGMGLERVSAVLQHVHSNYEIDLFQNLLKASAEAIG-------CANDDAPSL- 279

Query: 345 MAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNI 404
              +VVADHIR+ SF IADG  P NEGR YVLRRI+RRA R+G++ L A+  FF+ +V  
Sbjct: 280 ---KVVADHIRSCSFLIADGVLPSNEGRGYVLRRIIRRACRHGNK-LGARGTFFHKIVAA 335

Query: 405 VVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFI 464
           +V  MGD FPELKQ++AHI  ++  EE  F KTL +G++  ++   ++QG V+ G   F 
Sbjct: 336 LVAEMGDAFPELKQQQAHIERVLKTEEEQFAKTLEQGLKILEQDLAELQGSVIPGNVVFK 395

Query: 465 LWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAA 524
           L+DTYGFP+DLT  +A ER L +D +GF   M+  RER+R      A  A  MD ++   
Sbjct: 396 LYDTYGFPVDLTNDIARERELTIDEDGFEREMEAQRERAR------ASSAFGMDYNS--- 446

Query: 525 LHKRGVLATDDSFKFIWFQDHKSV--IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQG 582
                ++  D   +F+ +Q       I A++   + +E +  G E  +VL  + FYAE G
Sbjct: 447 -----LVKVDGETRFLGYQGVSGAGQIVALFRDGQAVERLEEGEEGVVVLDQTPFYAESG 501

Query: 583 GQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIA 642
           GQ+ D G++E     F VR+    GG  +H G +    G  SVG  V  +VD   R+  A
Sbjct: 502 GQVGDSGYLEAAGVRFDVRDTTKAGGAHLHHGVVAR--GNLSVGGAVKAEVDASVRQATA 559

Query: 643 PNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIK 702
            NH+ TH+L+ ALR+VLGDHV QKGS+V  ++LRFDFSH + +  E L+ +E IVN +I+
Sbjct: 560 LNHSATHLLHAALRQVLGDHVQQKGSLVDSQRLRFDFSHFEAIKAEQLKALEDIVNAEIR 619

Query: 703 AELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAE 762
              +V ++E  +  AK   G  A+FGE Y D VRV+++G                  S E
Sbjct: 620 RNTEVETEETDIDTAKA-KGAMALFGEKYGDQVRVLSMGG---------------DFSVE 663

Query: 763 LCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVT--TGLAY------KAFEAACSLEKE 814
           LCGGTH+S T +   F + SE G+A G+RRI AVT    LAY      +  EAA  ++  
Sbjct: 664 LCGGTHVSRTGDIGLFKITSEGGVAAGVRRIEAVTGAAALAYLNGAEEQLKEAASLVKGS 723

Query: 815 VDDASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAAS--NGKPFCISRVEVG 872
            D+     G+LLE+N   ++ +K  E+   KA   A +   AAA    G     +R++ G
Sbjct: 724 RDNLLDKLGALLERN---RSLEKELEQFKAKAASAAGDDLSAAAVEIKGAKVLAARLD-G 779

Query: 873 LDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQ 932
           LD  A+   V ++  + G  V++    E   K V+ AGV +  D + QL+  E L     
Sbjct: 780 LDGKALLALVDQLKNKLGRAVILLGG-ELDGKVVLVAGVTQ--DLTGQLKAGE-LMKQAA 835

Query: 933 PLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
              G  G G+  +A G GTDAA++  A+ LA  F    L
Sbjct: 836 AAVGGKGGGRPDMAQGGGTDAAKLDEALALAQRFVEQGL 874


>gi|402847263|ref|ZP_10895560.1| alanine--tRNA ligase [Porphyromonas sp. oral taxon 279 str. F0450]
 gi|402266739|gb|EJU16156.1| alanine--tRNA ligase [Porphyromonas sp. oral taxon 279 str. F0450]
          Length = 878

 Score =  622 bits (1604), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 376/940 (40%), Positives = 527/940 (56%), Gaps = 92/940 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+++  FF+ K H    S+P+V   DPTL+F NAGMNQ+K I LG A+      K 
Sbjct: 3   SKEIRESYKSFFQSKGHTIVPSAPMVVKGDPTLMFTNAGMNQFKDIILGNAE-----IKH 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK+EAI+WAWE LT+V 
Sbjct: 58  SRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKHEAIDWAWEYLTEVL 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
            L  +RLY T F G    GL  D+EA  IW K LPA R++     DNFWEMGD GPCGPC
Sbjct: 118 HLSPERLYVTVFEGAPAEGLERDDEAASIWAKHLPAERIINGNKHDNFWEMGDQGPCGPC 177

Query: 240 SEIHYDRTGNR-----DAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D   +      D  +LVN   P  IEIWN+VF+Q+NR++DGSL+PLP + +DTG+
Sbjct: 178 SEIHIDIRSDEERKAVDGLTLVNQSHPQVIEIWNLVFMQYNRKADGSLEPLPKRVIDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   +Q K SNYDTD+F P+  AI   TG      + GAD   K D+A RV+ADHI
Sbjct: 238 GFERLCMAMQGKTSNYDTDIFTPMIQAIATLTGI-----EYGAD--QKSDVAMRVIADHI 290

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++FAI DG  P N    YV+RRILRRAVRYG   L  ++ F   L+ ++++ MGD +P
Sbjct: 291 RTIAFAITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGRREAFMYSLLPVLIETMGDAYP 350

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ--GK-VLSGQDAFILWDTYGF 471
           EL      I +++  EE SF +TL  GI    K  ++ +  GK VL G DAF+L+DTYGF
Sbjct: 351 ELIAGRELIAKVMREEEESFLRTLETGIRLLDKQIEEAKKAGKTVLDGHDAFVLYDTYGF 410

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGG-AIVMDADATAALHKRGV 530
           PLDLT L+  E+GL VD  GF+ AM E +ER+R+A    AG   +V D  A   +   G 
Sbjct: 411 PLDLTALILTEQGLSVDEAGFDKAMQEQKERARNAAAIDAGDWQVVNDGSAVRFV---GY 467

Query: 531 LATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGF 590
              + + + + +++ K      Y                +VL+ + FYAE GGQ+ D+GF
Sbjct: 468 DTLECTTEILRYREVKQKNATFYQ---------------VVLSETPFYAEMGGQVGDKGF 512

Query: 591 IEGLFGSFY-VRNVQIYGGFVIH----IGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
           +    G+ Y V + +      IH    + +  EG  R  V EE        RR  I  NH
Sbjct: 513 LIATDGTKYEVFDTKRENNLAIHLMKKLPATLEGDFRAVVDEE--------RRHRIEANH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+L+ ALREVLG HV+QKGS V  E LRFDF+H   V+PE LR +E IV  +I+A +
Sbjct: 565 SATHLLHEALREVLGSHVEQKGSFVSDEVLRFDFAHFAKVEPEQLRAVERIVTARIRACI 624

Query: 706 DVFS-KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
            +   +E  + EA+ + G  A+FGE Y D VRV+  G                  S E C
Sbjct: 625 PLQEYREVPIDEAREM-GAMALFGEKYGDHVRVIRFGS-----------------STEFC 666

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGS 824
           GGTH+++T       + SE  +A G+RRI AV TG+A + +     L ++ D    I   
Sbjct: 667 GGTHVASTGVIGTLRITSESSVAAGVRRIEAV-TGVAAENY-----LYEQADMIDAIRQL 720

Query: 825 LLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVG----------LD 874
                Q+  A +K  EEN +   +V     E  A   +     RVEVG          + 
Sbjct: 721 FNNSPQLMTAIRKTLEENAELGKQVGEYVREQIAEKKRQLLEKRVEVGGVRLFLVEKEVP 780

Query: 875 AAAVREAVLKVIEQKGMPVMVFS--TDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQ 932
           A  V++   ++  +   P +  +   + +++K  +   + +   +S+    S+ L AA +
Sbjct: 781 AEIVKDIAFQIAGELHEPFVFIAACVEPSSSKPSLTLMISKDLVESRGWNASQLLRAAAK 840

Query: 933 PLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKLR 972
            ++G  G G+   A+  G +   +  A++     +AM+L+
Sbjct: 841 HIQG-GGGGQPHFATAGGKNVDGLNAAVE--ELLSAMELK 877


>gi|424939985|ref|ZP_18355748.1| alanyl-tRNA synthetase [Pseudomonas aeruginosa NCMG1179]
 gi|346056431|dbj|GAA16314.1| alanyl-tRNA synthetase [Pseudomonas aeruginosa NCMG1179]
          Length = 874

 Score =  622 bits (1603), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 387/939 (41%), Positives = 535/939 (56%), Gaps = 94/939 (10%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F +FFE+K H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLRFFEEKGHTRVASSSLIPANDPTLLFTNAGMNQFKDCFLGL-----EKRAY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           TRA  +QKC+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT  K
Sbjct: 58  TRATTSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWEFLTGEK 117

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFW 228
              LP ++L+ T +        A D+EA DIW K   +PA R++  G         DNFW
Sbjct: 118 WLNLPKEKLWVTVY--------ATDDEAYDIWTKEVGVPAERMVRIGDNKGAPYASDNFW 169

Query: 229 EMGDTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKP 284
            MGDTGPCGPC+EI +D      G    +     D    IEIWN VF+QFNR +DG + P
Sbjct: 170 AMGDTGPCGPCTEIFFDHGPEIWGGPPGSP--EEDGDRYIEIWNNVFMQFNRTADGVMHP 227

Query: 285 LPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVD 344
           LPA  VDTG+G ER++++LQ+  SNY+ D+F  +  A  +A G          DDA  + 
Sbjct: 228 LPAPSVDTGMGLERVSAVLQHVHSNYEIDLFQNLLKASAEAIG-------CANDDAPSL- 279

Query: 345 MAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNI 404
              +VVADHIR+ SF IADG  P NEGR YVLRRI+RRA R+G++ L A+  FF+ +V  
Sbjct: 280 ---KVVADHIRSCSFLIADGVLPSNEGRGYVLRRIIRRACRHGNK-LGARGTFFHKIVAA 335

Query: 405 VVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFI 464
           +V  MGD FPELKQ++AHI  ++  EE  F KTL +G++  ++   ++QG V+ G   F 
Sbjct: 336 LVTEMGDAFPELKQQQAHIERVLRTEEEQFAKTLEQGLKILEQDLAELQGSVIPGNVVFK 395

Query: 465 LWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAA 524
           L+DTYGFP+DLT  +A ER L +D +GF   M+  RER+R      A  A  MD ++   
Sbjct: 396 LYDTYGFPVDLTNDIARERELTIDEDGFEREMEAQRERAR------ASSAFGMDYNS--- 446

Query: 525 LHKRGVLATDDSFKFIWFQDHKSV--IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQG 582
                ++  D   +F+ +Q       I A++   + +E +  G E  +VL  + FYAE G
Sbjct: 447 -----LVKVDGETRFLGYQGVSGAGQIVALFRDGQAVERLEEGEEGVVVLDQTPFYAESG 501

Query: 583 GQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIA 642
           GQ+ D G++E     F VR+    GG  +H G +    G  SVG  V  +VD   R+  A
Sbjct: 502 GQVGDSGYLEAAGVRFDVRDTTKAGGAHLHHGVVAR--GNLSVGGAVKAEVDASVRQATA 559

Query: 643 PNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIK 702
            NH+ TH+L+ ALR+VLGDHV QKGS+V  ++LRFDFSH + +  E L+ +E IVN +I+
Sbjct: 560 LNHSATHLLHAALRQVLGDHVQQKGSLVDSQRLRFDFSHFEAIKAEQLKALEDIVNAEIR 619

Query: 703 AELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAE 762
              +V ++E  +  AK   G  A+FGE Y D VRV+++G                  S E
Sbjct: 620 RNTEVETEETDIDTAKA-KGAMALFGEKYGDQVRVLSMGG---------------DFSVE 663

Query: 763 LCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVT--TGLAY------KAFEAACSLEKE 814
           LCGGTH+S T +   F + SE G+A G+RRI AVT    LAY      +  EAA  ++  
Sbjct: 664 LCGGTHVSRTGDIGLFKITSEGGVAAGVRRIEAVTGAAALAYLNGAEEQLKEAASLVKGS 723

Query: 815 VDDASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAAS--NGKPFCISRVEVG 872
            D+     G+LLE+N   ++ +K  E+   KA   A +   AAA    G     +R++ G
Sbjct: 724 RDNLLDKLGALLERN---RSLEKELEQLKAKAASAAGDDLSAAAVEIKGAKVLAARLD-G 779

Query: 873 LDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQ 932
           LD  A+   V ++  + G  V++    E   K V+ AGV +  D + QL+  E L     
Sbjct: 780 LDGKALLALVDQLKNKLGRAVILLGG-ELDGKVVLVAGVTQ--DLTGQLKAGE-LMKQAA 835

Query: 933 PLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
              G  G G+  +A G GTDAA++  A+ LA  F    L
Sbjct: 836 AAVGGKGGGRPDMAQGGGTDAAKLDEALALAQRFVEQGL 874


>gi|15596100|ref|NP_249594.1| alanyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
 gi|107100361|ref|ZP_01364279.1| hypothetical protein PaerPA_01001386 [Pseudomonas aeruginosa PACS2]
 gi|218893128|ref|YP_002441997.1| alanyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
 gi|355647513|ref|ZP_09055077.1| alanyl-tRNA synthetase [Pseudomonas sp. 2_1_26]
 gi|386060197|ref|YP_005976719.1| alanyl-tRNA synthetase [Pseudomonas aeruginosa M18]
 gi|392985619|ref|YP_006484206.1| alanyl-tRNA synthetase [Pseudomonas aeruginosa DK2]
 gi|418583633|ref|ZP_13147702.1| alanyl-tRNA synthetase [Pseudomonas aeruginosa MPAO1/P1]
 gi|418588998|ref|ZP_13152928.1| alanyl-tRNA synthetase [Pseudomonas aeruginosa MPAO1/P2]
 gi|419753917|ref|ZP_14280315.1| alanyl-tRNA synthetase [Pseudomonas aeruginosa PADK2_CF510]
 gi|421155599|ref|ZP_15615073.1| alanyl-tRNA synthetase [Pseudomonas aeruginosa ATCC 14886]
 gi|421162488|ref|ZP_15621328.1| alanyl-tRNA synthetase [Pseudomonas aeruginosa ATCC 25324]
 gi|421515526|ref|ZP_15962212.1| alanyl-tRNA ligase [Pseudomonas aeruginosa PAO579]
 gi|451987451|ref|ZP_21935609.1| Alanyl-tRNA synthetase [Pseudomonas aeruginosa 18A]
 gi|20532264|sp|Q9I553.1|SYA_PSEAE RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|9946804|gb|AAG04292.1|AE004524_9 alanyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
 gi|218773356|emb|CAW29168.1| alanyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
 gi|347306503|gb|AEO76617.1| alanyl-tRNA synthetase [Pseudomonas aeruginosa M18]
 gi|354827920|gb|EHF12057.1| alanyl-tRNA synthetase [Pseudomonas sp. 2_1_26]
 gi|375047241|gb|EHS39790.1| alanyl-tRNA synthetase [Pseudomonas aeruginosa MPAO1/P1]
 gi|375052157|gb|EHS44616.1| alanyl-tRNA synthetase [Pseudomonas aeruginosa MPAO1/P2]
 gi|384399856|gb|EIE46221.1| alanyl-tRNA synthetase [Pseudomonas aeruginosa PADK2_CF510]
 gi|392321124|gb|AFM66504.1| alanyl-tRNA synthetase [Pseudomonas aeruginosa DK2]
 gi|404349254|gb|EJZ75591.1| alanyl-tRNA ligase [Pseudomonas aeruginosa PAO579]
 gi|404520242|gb|EKA30926.1| alanyl-tRNA synthetase [Pseudomonas aeruginosa ATCC 14886]
 gi|404534368|gb|EKA44106.1| alanyl-tRNA synthetase [Pseudomonas aeruginosa ATCC 25324]
 gi|451755069|emb|CCQ88132.1| Alanyl-tRNA synthetase [Pseudomonas aeruginosa 18A]
 gi|453047929|gb|EME95642.1| alanyl-tRNA ligase [Pseudomonas aeruginosa PA21_ST175]
          Length = 874

 Score =  622 bits (1603), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 387/939 (41%), Positives = 535/939 (56%), Gaps = 94/939 (10%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F +FFE+K H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLRFFEEKGHTRVASSSLIPANDPTLLFTNAGMNQFKDCFLGL-----EKRAY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           TRA  +QKC+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT  K
Sbjct: 58  TRATTSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWEFLTGEK 117

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFW 228
              LP ++L+ T +        A D+EA DIW K   +PA R++  G         DNFW
Sbjct: 118 WLNLPKEKLWVTVY--------ATDDEAYDIWTKEVGVPAERMVRIGDNKGAPYASDNFW 169

Query: 229 EMGDTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKP 284
            MGDTGPCGPC+EI +D      G    +     D    IEIWN VF+QFNR +DG + P
Sbjct: 170 AMGDTGPCGPCTEIFFDHGPEIWGGPPGSP--EEDGDRYIEIWNNVFMQFNRTADGVMHP 227

Query: 285 LPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVD 344
           LPA  VDTG+G ER++++LQ+  SNY+ D+F  +  A  +A G          DDA  + 
Sbjct: 228 LPAPSVDTGMGLERVSAVLQHVHSNYEIDLFQNLLKASAEAIG-------CANDDAPSL- 279

Query: 345 MAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNI 404
              +VVADHIR+ SF IADG  P NEGR YVLRRI+RRA R+G++ L A+  FF+ +V  
Sbjct: 280 ---KVVADHIRSCSFLIADGVLPSNEGRGYVLRRIIRRACRHGNK-LGARGTFFHKIVAA 335

Query: 405 VVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFI 464
           +V  MGD FPELKQ++AHI  ++  EE  F KTL +G++  ++   ++QG V+ G   F 
Sbjct: 336 LVAEMGDAFPELKQQQAHIERVLKTEEEQFAKTLEQGLKILEQDLAELQGSVIPGNVVFK 395

Query: 465 LWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAA 524
           L+DTYGFP+DLT  +A ER L +D +GF   M+  RER+R      A  A  MD ++   
Sbjct: 396 LYDTYGFPVDLTNDIARERELTIDEDGFEREMEAQRERAR------ASSAFGMDYNS--- 446

Query: 525 LHKRGVLATDDSFKFIWFQDHKSV--IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQG 582
                ++  D   +F+ +Q       I A++   + +E +  G E  +VL  + FYAE G
Sbjct: 447 -----LVKVDGETRFLGYQGVSGAGQIVALFRDGQAVERLEEGEEGVVVLDQTPFYAESG 501

Query: 583 GQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIA 642
           GQ+ D G++E     F VR+    GG  +H G +    G  SVG  V  +VD   R+  A
Sbjct: 502 GQVGDSGYLEAAGVRFDVRDTTKAGGAHLHHGVVAR--GNLSVGGAVKAEVDASVRQATA 559

Query: 643 PNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIK 702
            NH+ TH+L+ ALR+VLGDHV QKGS+V  ++LRFDFSH + +  E L+ +E IVN +I+
Sbjct: 560 LNHSATHLLHAALRQVLGDHVQQKGSLVDSQRLRFDFSHFEAIKAEQLKALEDIVNAEIR 619

Query: 703 AELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAE 762
              +V ++E  +  AK   G  A+FGE Y D VRV+++G                  S E
Sbjct: 620 RNTEVETEETDIDTAKA-KGAMALFGEKYGDQVRVLSMGG---------------DFSVE 663

Query: 763 LCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVT--TGLAY------KAFEAACSLEKE 814
           LCGGTH+S T +   F + SE G+A G+RRI AVT    LAY      +  EAA  ++  
Sbjct: 664 LCGGTHVSRTGDIGLFKITSEGGVAAGVRRIEAVTGAAALAYLNGAEEQLKEAASLVKGS 723

Query: 815 VDDASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAAS--NGKPFCISRVEVG 872
            D+     G+LLE+N   ++ +K  E+   KA   A +   AAA    G     +R++ G
Sbjct: 724 RDNLLDKLGALLERN---RSLEKELEQLKAKAASAAGDDLSAAAVEIKGAKVLAARLD-G 779

Query: 873 LDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQ 932
           LD  A+   V ++  + G  V++    E   K V+ AGV +  D + QL+  E L     
Sbjct: 780 LDGKALLALVDQLKNKLGRAVILLGG-ELDGKVVLVAGVTQ--DLTGQLKAGE-LMKQAA 835

Query: 933 PLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
              G  G G+  +A G GTDAA++  A+ LA  F    L
Sbjct: 836 AAVGGKGGGRPDMAQGGGTDAAKLDEALALAQRFVEQGL 874


>gi|300770787|ref|ZP_07080665.1| alanine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
 gi|300762344|gb|EFK59162.1| alanine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
          Length = 893

 Score =  622 bits (1603), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 336/778 (43%), Positives = 462/778 (59%), Gaps = 72/778 (9%)

Query: 32  HHHSLISRFSASAVAAMPGADPQVVEWPAT--KVRDTFFKFFEDKNHVNWKSSPVVPVND 89
           H  +++S+F       +P     ++E   T  ++R+ F  FF+ KNH    S+PVV  ND
Sbjct: 2   HKAAILSKF-------VPKFTDIIIEISMTNREIREAFLNFFKSKNHQIVPSAPVVVKND 54

Query: 90  PTLLFANAGMNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHT 149
           PTL+F NAGMNQ+K  FLG A P     K +R  +TQ+C+R  GKHNDL++VG DTYHHT
Sbjct: 55  PTLMFTNAGMNQFKDFFLGEAQP-----KYSRIADTQRCLRVSGKHNDLEEVGIDTYHHT 109

Query: 150 FFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIW 209
            FEMLGNWSFGDYFK EAIEWAWELLT VY+L  DRLY T F GD+  GL  D EA D W
Sbjct: 110 LFEMLGNWSFGDYFKKEAIEWAWELLTVVYKLDKDRLYVTIFEGDDSEGLVKDTEAYDFW 169

Query: 210 LKFLPASRVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRD-----AASLVNNDDPTCI 264
             ++   R+L    KDNFWEMG+TGPCGPCSEIHYD     +       SLVN D P  I
Sbjct: 170 KSWISEDRILLGNKKDNFWEMGETGPCGPCSEIHYDMRTEEERRTTPGQSLVNADHPQVI 229

Query: 265 EIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQ 324
           EIWN+VF+QFNR  +GSL+ LPAKHVDTG+GFERL   +Q K SNYDTDVF P+   I Q
Sbjct: 230 EIWNLVFMQFNRLKNGSLESLPAKHVDTGMGFERLVRAIQGKSSNYDTDVFQPMIAFIAQ 289

Query: 325 ATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAV 384
             G      + GAD  ++ D+A RV++DHIR +SFAIADG  P N    YV+RRILRRAV
Sbjct: 290 KAGI-----QYGAD--ERTDIAMRVLSDHIRAVSFAIADGQLPSNNKAGYVIRRILRRAV 342

Query: 385 RYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEK 444
           RY    L  +  F N LV ++ K    VF EL Q++  +++++  EE SF +TL+ G+++
Sbjct: 343 RYAYTFLNFKTPFINELVPLLAKEFEGVFDELIQQQDFVQKVVLEEEVSFLRTLVTGVQR 402

Query: 445 FKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSR 504
           F+  A+      + G+ AF L+DTYGFP+DLT+L+A E+G+ VD+ GF  A+   ++RSR
Sbjct: 403 FESYAE--SNTAVGGEFAFELFDTYGFPIDLTELLAREKGMEVDMAGFQEALQIQKDRSR 460

Query: 505 SAQNKQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVP 564
           +A     G  +               ++ DD  +F+ + + K+  + +    ++ +    
Sbjct: 461 AATAIDTGDWV--------------AVSEDDQVEFVGYDNLKATTEIV----KYRKVTAK 502

Query: 565 GNE-VGIVLASSSFYAEQGGQIFDEGFI--EGLFGSFYVRNVQIYGGFVIHIGSL--TEG 619
           G E   +VL+ + FYAE GGQ+ D G +  E      Y+ + +   G ++H  +    + 
Sbjct: 503 GKEQYQLVLSVTPFYAEGGGQVGDSGVLLSESTGEKIYITDTKKENGLIVHFTNTLPVQM 562

Query: 620 AGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDF 679
            G F        KVD  +R     NH+ TH+L+ AL+EVLG HV+QKGS+V  + LRFD 
Sbjct: 563 EGTFE------AKVDVQKRLDTENNHSATHLLHAALKEVLGTHVNQKGSLVNADILRFDI 616

Query: 680 SHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVA 739
           SH   V  E L+++E IVN +I+  + +  +     +    +G+ A+FGE Y D VRV+ 
Sbjct: 617 SHFAKVTEEELKQVEDIVNAKIRENIPLKEQRHVPFQQALDSGVTALFGEKYGDYVRVIT 676

Query: 740 IGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVT 797
              +                S ELCGGTH+  T +   F ++SE  +A G+RRI A+T
Sbjct: 677 FDDQ---------------FSKELCGGTHVKATGQIGFFKIISESAVAAGVRRIEAIT 719


>gi|373457376|ref|ZP_09549143.1| alanyl-tRNA synthetase [Caldithrix abyssi DSM 13497]
 gi|371719040|gb|EHO40811.1| alanyl-tRNA synthetase [Caldithrix abyssi DSM 13497]
          Length = 870

 Score =  621 bits (1602), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 348/812 (42%), Positives = 479/812 (58%), Gaps = 84/812 (10%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R  F  FF  K H    S+PV+P +DPTLLF NAGMNQ+K IFLG         + 
Sbjct: 3   ANEIRQQFIDFFISKGHTFVPSAPVIPQDDPTLLFTNAGMNQFKDIFLGKGK-----REY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           TRA N+QKCIR  GKHNDL++VG+DTYHHTFFEMLGNWSFGDY+K EAI+WAWELLT+V+
Sbjct: 58  TRAVNSQKCIRVSGKHNDLEEVGRDTYHHTFFEMLGNWSFGDYYKKEAIQWAWELLTEVW 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIW--LKFLPASRVLPFGCKDNFWEMGDTGPCG 237
           +LP ++L+AT            D+EA ++W  +  +   R+L FG KDNFWEMG  GPCG
Sbjct: 118 KLPKEKLFATVH--------HTDDEAAELWKSVTDIAPQRILKFGDKDNFWEMGPVGPCG 169

Query: 238 PCSEIHYD------RTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVD 291
           PCSEIH D          ++    VN D    IE+WN+VFIQFNR+ +G+L PLPA+HVD
Sbjct: 170 PCSEIHIDLGEEFCDLKGQEHTCGVNGDCGRYIELWNLVFIQFNRDENGTLHPLPARHVD 229

Query: 292 TGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVD--MAYRV 349
           TG GFERL ++LQ K SNYDTDVFMPI +AI          GK+   D  + D  MA+RV
Sbjct: 230 TGAGFERLVAVLQGKTSNYDTDVFMPILEAI----------GKMVGQDYRQSDEQMAFRV 279

Query: 350 VADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVM 409
           +ADHIR L+F+IADG  P NEGR YV+RRILRRA RYG   L  ++ F   LV  VV++M
Sbjct: 280 IADHIRMLTFSIADGGMPSNEGRGYVMRRILRRAARYGRN-LNMREPFMYKLVPTVVQMM 338

Query: 410 GDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK---VLSGQDAFILW 466
           GDV+PE+++R+ HI  +I AEE  F  TL +G+E F+K  +D++ +   V+ G + F L+
Sbjct: 339 GDVYPEIRERQEHIMAVIRAEEERFNLTLDRGLEIFEKIKEDLKSRGEAVIPGYEVFRLY 398

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DT+GFP+DLT+++AEE GL +D+ GF   M+  R+ +R +         VM    T    
Sbjct: 399 DTFGFPVDLTRILAEENGLTLDMAGFEEHMEAQRKLARES------SKFVM----TEGEQ 448

Query: 527 KRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           +  VL      +F+ + +       +   +  +   +    + ++L  + FYAE GGQ+ 
Sbjct: 449 QWIVLNEGADSRFVGYDE-------LAIETHIMRYRLSEKHLQVILKETPFYAESGGQVG 501

Query: 587 DEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFS-VGEEVICKVDYDRRKLIAPNH 645
           D+G I+G   +  V + +  G  ++H     E    F    ++V+ +V    R+    NH
Sbjct: 502 DKGTIKGENFTLKVLDTKKEGDHIVH---FCEPVTDFKPASDKVLAEVTSSERRSTQKNH 558

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           T TH+L+ ALR+VLG HV Q GS+V P +LRFDF+H   +  E +R IE IVN +I+  +
Sbjct: 559 TATHLLHAALRKVLGAHVTQAGSLVEPNRLRFDFNHYDRLSEEQIREIERIVNRKIQQNI 618

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            +       +EAK   G  A+FGE Y D VR +    K++D             S ELCG
Sbjct: 619 PLQIAYEKFSEAKK-KGAMALFGEKYGDLVRTI----KIDDF------------SFELCG 661

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDD-------- 817
           GTH+  T E   F +L E GIA GIRRI A+T   A +  +    +  ++++        
Sbjct: 662 GTHVKATGEIGVFIILYEAGIAAGIRRIEALTGEKAVEYIQQKKQILHQLNELLNATDEE 721

Query: 818 -ASKIEGSLLEKNQVRKAQKKVAEENLQKAVK 848
              K+E  L EK  + K  +K    NLQ  V+
Sbjct: 722 LTPKVEQLLNEKRHLEKELQKARTANLQAGVE 753


>gi|269965244|ref|ZP_06179378.1| alanyl-tRNA synthetase [Vibrio alginolyticus 40B]
 gi|269830230|gb|EEZ84457.1| alanyl-tRNA synthetase [Vibrio alginolyticus 40B]
          Length = 860

 Score =  621 bits (1602), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 375/915 (40%), Positives = 520/915 (56%), Gaps = 88/915 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR+ F KFFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRNAFLKFFESKGHQIVESSSLVPHNDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT+V +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAISFAWEFLTEVLKL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           PADRL  T +          D+EA DIW K   +PA R++  G K        DNFW+MG
Sbjct: 122 PADRLLVTVY--------ETDDEAFDIWNKKVGVPADRIVRIGDKEGGKPYESDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
           DTGPCGPC+EI YD      G R        D    IEIWN VF+QFNR +DG+++PLP 
Sbjct: 174 DTGPCGPCTEIFYDHGEHIWGGRPGTP--EEDGDRFIEIWNNVFMQFNRHADGTMEPLPK 231

Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
             VDTG+G ER+++I+Q   SNY+ DVF  +  A  +  G    S           + + 
Sbjct: 232 PSVDTGMGIERISAIMQGVHSNYEIDVFQALIKAAAEVIGYEDLS-----------NQSL 280

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RV+ADHIR+ SF I DG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF+ LV ++  
Sbjct: 281 RVIADHIRSCSFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGAFFHKLVGVLAD 339

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWD 467
           +MG    ELK+++A + +++  EE +FG+TL +G+    +A  ++ GKVL G+  F L+D
Sbjct: 340 IMGTAGEELKRQQAVVEKVLRIEEENFGRTLERGMAILNEALDNLDGKVLDGETVFKLYD 399

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
           TYGFP DLT  +A ER   +D EGF  AM+E R+R+R A N           D  AA+  
Sbjct: 400 TYGFPADLTNDVAREREFAIDEEGFEKAMEEQRQRAREAGN--------FGTDYNAAIK- 450

Query: 528 RGVLATDDSFKFIWFQDHK--SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
                 D   +F  +   K  S + A++     ++S+  G++  IVL  + FYAE GGQ 
Sbjct: 451 -----VDTQTEFCGYTATKGSSSVAAMFVEGNEVDSLSAGDKAIIVLGETPFYAESGGQC 505

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D G I    G F+V + Q  G  + H G + EG    + G+EV   VD +RR  I+ NH
Sbjct: 506 GDAGEIRTESGVFHVEDTQKLGNAIAHHGVMAEGV--LAKGDEVATIVDAERRAAISLNH 563

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+L+ ALR+VLG+HV QKGS+V  + LRFDFSH + V    L+ +E +VN QI+   
Sbjct: 564 SATHLLHAALRQVLGEHVTQKGSLVKADNLRFDFSHLEAVTAAELKEVERLVNAQIRRNH 623

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    +  AK   G  A+FGE Y D VRV+++G                  S ELCG
Sbjct: 624 TIETNVMDIESAKK-KGAMALFGEKYDDEVRVLSMG----------------DFSTELCG 666

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSL 825
           G H S+T +   F + SE GIA GIRRI AVT   A  A EA  +  +E    S  +   
Sbjct: 667 GIHASSTGDIGLFKITSESGIAAGIRRIEAVTGEAALDAIEAQNAKYEEKLAESAQKAKA 726

Query: 826 LEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKV 885
           LEK +V+K + K+A      A + A    +A   NG    ++ +E G D+  +R  V  +
Sbjct: 727 LEK-EVQKLKDKMA------AAESANIMGKAVEVNGTKVLVAALE-GADSKNLRTMVDDI 778

Query: 886 IEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGL 945
             Q G  V++ + + T +K  + AGV +  D + +++  + +    + + G+ G G+  +
Sbjct: 779 KNQMGSGVVLLA-NVTGDKVGLIAGVTK--DLTGKVKAGDLVKMIAEQVGGKGG-GRPDM 834

Query: 946 ASGQGTDAAQVTPAM 960
           A   GTD A +  A+
Sbjct: 835 AQAGGTDVAALPEAI 849


>gi|187469665|gb|AAI66719.1| Aars2 protein [Rattus norvegicus]
          Length = 746

 Score =  621 bits (1601), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 346/731 (47%), Positives = 451/731 (61%), Gaps = 46/731 (6%)

Query: 63  VRDTFFKFFEDKN-HVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           VRD F  FF D++ H    S+ V P  DP+LLF NAGMNQ+KPIFLGT DP ++++   R
Sbjct: 36  VRDAFLSFFRDRHGHRLVPSASVRPRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRR 95

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFG-DYFKNEAIEWAWELLTKVYR 180
             N+QKC+RAGG+HNDL+DVG+D  HHTFFEMLGNW+FG +YFK EA   AWELLT+VY 
Sbjct: 96  VANSQKCVRAGGRHNDLEDVGRDLSHHTFFEMLGNWAFGGEYFKKEACSMAWELLTQVYG 155

Query: 181 LPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +P DRL+ +YF GD K GL PD E RDIWL   +PASRVL FG ++NFWEMGDTGPCGPC
Sbjct: 156 IPEDRLWVSYFSGDSKTGLDPDLETRDIWLSLGVPASRVLSFGLQENFWEMGDTGPCGPC 215

Query: 240 SEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERL 299
           +EIHYD  G            P  +E+WN+VF+Q  RE+DGSL  LP +HVDTG+G ERL
Sbjct: 216 TEIHYDLAGGMGP--------PQLVELWNLVFMQHYREADGSLHLLPQQHVDTGMGLERL 267

Query: 300 TSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSF 359
            ++LQ K S YDTD+F P+ DAI Q+    PYSG+VGA D  ++D AYRVVADHIRTLS 
Sbjct: 268 VAVLQGKHSTYDTDLFSPLLDAIHQSCRVPPYSGRVGAADEGRIDTAYRVVADHIRTLSV 327

Query: 360 AIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQR 419
            IADG  PG  G   VLRRILRRAVRY +EVL+A  GF   LV +VV  +G  +PEL++ 
Sbjct: 328 CIADGVSPGMSGAPLVLRRILRRAVRYSTEVLQAPPGFLGNLVPVVVATLGAAYPELQKN 387

Query: 420 EAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAF---ILWD-----TYGF 471
              I  +++ +EA+F  +L +G     +       K L   D F   + W        G 
Sbjct: 388 SVKIANLVSEDEAAFLASLQRGRRIIDRTV-----KRLGPSDLFPAEVAWSLSLSGNLGI 442

Query: 472 PLDLTQLMAEERGLLVDIEGFNN-AMDEARERSRSAQNKQAGGAIVMDADATAALHKRGV 530
           PLDL QLM EE+G+ +D  G    A  EA+ R++ A+  Q  G + +D  A   LH++G+
Sbjct: 443 PLDLVQLMLEEKGVKLDTAGLEQLAQKEAQHRAQQAEAAQEEG-LCLDVHALEELHRQGI 501

Query: 531 LATDDSFKFIW---------FQDHKSVIKAIY--TGSEFIESVVPGNEVGIVLASSSFYA 579
             TDDS K+ +         F   ++ +  +Y  TG+  + SV  G   G++L  ++FYA
Sbjct: 502 PTTDDSPKYNYSLRPNGDYEFGLCEAQVLQLYSETGTA-VASVGEGQRCGLLLDRTNFYA 560

Query: 580 EQGGQIFDEGFIEGLFGS---FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYD 636
           EQGGQ  D G++         F V   Q+ GGF++H     E      VG+ V   VD  
Sbjct: 561 EQGGQASDRGYLIRTGQQDVLFPVARAQVCGGFILHEAMAPEC---LQVGDRVQLYVDKA 617

Query: 637 RRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESI 696
            R      HT TH+LN+ALR+ LG   +Q+GS + PE+LRFD +   P+  E LR +ES 
Sbjct: 618 WRMGCMVKHTATHLLNWALRQTLGPTTEQRGSHLNPERLRFDVATQTPLTTEQLRTVESY 677

Query: 697 VNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEW 756
           V E +  +  V+ +E  LA    I GLR++  EVYPDPVRVV++G  V   LA P ++  
Sbjct: 678 VQEAVGQDKPVYMEEVPLAHTARIPGLRSL-DEVYPDPVRVVSVGVPVAQALA-PASQAA 735

Query: 757 LSISAELCGGT 767
           L  S ELC GT
Sbjct: 736 LQTSVELCCGT 746


>gi|91227829|ref|ZP_01262002.1| alanyl-tRNA synthetase [Vibrio alginolyticus 12G01]
 gi|91188339|gb|EAS74635.1| alanyl-tRNA synthetase [Vibrio alginolyticus 12G01]
          Length = 860

 Score =  620 bits (1600), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 375/915 (40%), Positives = 519/915 (56%), Gaps = 88/915 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR+ F KFFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRNAFLKFFESKGHQIVESSSLVPHNDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT+V +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAISFAWEFLTEVLKL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           PADRL  T +          D+EA DIW K   +PA R++  G K        DNFW+MG
Sbjct: 122 PADRLLVTVY--------ETDDEAFDIWNKKVGVPADRIVRIGDKEGGKPYESDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
           DTGPCGPC+EI YD      G R        D    IEIWN VF+QFNR +DG+++PLP 
Sbjct: 174 DTGPCGPCTEIFYDHGEHIWGGRPGTP--EEDGDRFIEIWNNVFMQFNRHADGTMEPLPK 231

Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
             VDTG+G ER+++I+Q   SNY+ DVF  +  A  +  G    S           + + 
Sbjct: 232 PSVDTGMGIERISAIMQGVHSNYEIDVFQALIKAAAEVIGYEDLS-----------NQSL 280

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RV+ADHIR+ SF I DG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF+ LV ++  
Sbjct: 281 RVIADHIRSCSFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGAFFHKLVGVLAD 339

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWD 467
           +MG    ELK+++A + +++  EE +FG+TL +G+    +A  ++ GKVL G+  F L+D
Sbjct: 340 IMGTAGEELKRQQAVVEKVLRIEEENFGRTLERGMAILNEALDNLDGKVLDGETVFKLYD 399

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
           TYGFP DLT  +A ER   +D EGF  AM+E R+R+R A N           D  AA+  
Sbjct: 400 TYGFPADLTNDVAREREFAIDEEGFEKAMEEQRQRAREAGN--------FGTDYNAAIK- 450

Query: 528 RGVLATDDSFKFIWFQDHK--SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
                 D   +F  +   K  S + A++     ++S+  G++  IVL  + FYAE GGQ 
Sbjct: 451 -----VDTQTEFCGYTGTKGSSSVAAMFVEGNEVDSLSAGDKAIIVLGETPFYAESGGQC 505

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D G I    G F V + Q  G  + H G + EG    + G+EV   VD +RR  I+ NH
Sbjct: 506 GDAGEIRTESGVFRVEDTQKLGNAIAHHGVMAEGV--LAKGDEVATIVDAERRAAISLNH 563

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+L+ ALR+VLG+HV QKGS+V  + LRFDFSH + V    L+ +E +VN QI+   
Sbjct: 564 SATHLLHAALRQVLGEHVTQKGSLVKADNLRFDFSHLEAVTAAELKEVERLVNAQIRRNH 623

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    +  AK   G  A+FGE Y D VRV+++G                  S ELCG
Sbjct: 624 TIETNVMDIESAKK-KGAMALFGEKYDDEVRVLSMG----------------DFSTELCG 666

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSL 825
           G H S+T +   F + SE GIA GIRRI AVT   A  A EA  +  +E    S  +   
Sbjct: 667 GIHASSTGDIGLFKITSESGIAAGIRRIEAVTGEAALDAIEAQNAKYEEKLAESAQKAKA 726

Query: 826 LEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKV 885
           LEK +V+K + K+A      A + A    +A   NG    ++ +E G D+  +R  V  +
Sbjct: 727 LEK-EVQKLKDKMA------AAESANIMGKAVEVNGTKVLVAALE-GADSKNLRTMVDDI 778

Query: 886 IEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGL 945
             Q G  V++ + + T +K  + AGV +  D + +++  + +    + + G+ G G+  +
Sbjct: 779 KNQMGSGVVLLA-NVTGDKVGLIAGVTK--DLTGKVKAGDLVKMIAEQVGGKGG-GRPDM 834

Query: 946 ASGQGTDAAQVTPAM 960
           A   GTD A +  A+
Sbjct: 835 AQAGGTDVAALPEAI 849


>gi|116048827|ref|YP_792373.1| alanyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|421176100|ref|ZP_15633768.1| alanyl-tRNA synthetase [Pseudomonas aeruginosa CI27]
 gi|122257933|sp|Q02I63.1|SYA_PSEAB RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|115584048|gb|ABJ10063.1| alanyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|404531253|gb|EKA41213.1| alanyl-tRNA synthetase [Pseudomonas aeruginosa CI27]
          Length = 874

 Score =  620 bits (1599), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 386/939 (41%), Positives = 535/939 (56%), Gaps = 94/939 (10%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F +FFE+K H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLRFFEEKGHTRVASSSLIPANDPTLLFTNAGMNQFKDCFLGL-----EKRAY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           TRA  +QKC+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT  K
Sbjct: 58  TRATTSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWEFLTGEK 117

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFW 228
              LP ++L+ T +        A D+EA DIW K   +PA R++  G         DNFW
Sbjct: 118 WLNLPKEKLWVTVY--------ATDDEAYDIWTKEVGVPAERMVRIGDNKGAPYASDNFW 169

Query: 229 EMGDTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKP 284
            MGDTGPCGPC+EI +D      G    +     D    IEIWN VF+QFNR +DG + P
Sbjct: 170 AMGDTGPCGPCTEIFFDHGPEIWGGPPGSP--EEDGDRYIEIWNNVFMQFNRTADGVMHP 227

Query: 285 LPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVD 344
           LPA  VDTG+G ER++++LQ+  SNY+ D+F  +  A  +A G          DDA  + 
Sbjct: 228 LPAPSVDTGMGLERVSAVLQHVHSNYEIDLFQNLLKASAEAIG-------CANDDAPSL- 279

Query: 345 MAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNI 404
              +VVADHIR+ SF IADG  P NEGR YVLRRI+RRA R+G++ L A+  FF+ +V  
Sbjct: 280 ---KVVADHIRSCSFLIADGVLPSNEGRGYVLRRIIRRACRHGNK-LGARGTFFHKIVAA 335

Query: 405 VVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFI 464
           +V  MGD FPELKQ++AHI  ++  EE  F KTL +G++  ++   ++QG V+ G   F 
Sbjct: 336 LVAEMGDAFPELKQQQAHIERVLKTEEEQFAKTLEQGLKILEQDLAELQGSVIPGNVVFK 395

Query: 465 LWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAA 524
           L+DTYGFP+DLT  +A ER L +D +GF   M+  RER+R      A  A  MD ++   
Sbjct: 396 LYDTYGFPVDLTNDIARERELTIDEDGFEREMEAQRERAR------ASSAFGMDYNS--- 446

Query: 525 LHKRGVLATDDSFKFIWFQDHKSV--IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQG 582
                ++  D   +F+ +Q       I A++   + +E +  G E  +VL  + FYAE G
Sbjct: 447 -----LVKVDGETRFLGYQGVSGAGQIVALFRDGQAVERLEEGEEGVVVLDQTPFYAESG 501

Query: 583 GQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIA 642
           GQ+ D G++E     F VR+    GG  +H G +    G  SVG  V  +VD   R+  A
Sbjct: 502 GQVGDSGYLEAAGVRFDVRDTTKAGGAHLHHGVVAR--GNLSVGAAVKAEVDASVRQATA 559

Query: 643 PNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIK 702
            NH+ TH+L+ ALR+VLGDHV QKGS+V  ++LRFDFSH + +  E L+ +E IVN +I+
Sbjct: 560 LNHSATHLLHAALRQVLGDHVQQKGSLVDSQRLRFDFSHFEAIKAEQLKALEDIVNAEIR 619

Query: 703 AELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAE 762
              +V ++E  +  AK   G  A+FGE Y D VRV+++G                  S E
Sbjct: 620 RNTEVETEETDIDTAKA-KGAMALFGEKYGDQVRVLSMGG---------------DFSVE 663

Query: 763 LCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVT--TGLAY------KAFEAACSLEKE 814
           LCGGTH+S T +   F + SE G+A G+RRI AVT    LAY      +  EAA  ++  
Sbjct: 664 LCGGTHVSRTGDIGLFKITSEGGVAAGVRRIEAVTGAAALAYLNGAEEQLKEAASLVKGS 723

Query: 815 VDDASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAAS--NGKPFCISRVEVG 872
            D+     G+LLE+N   ++ +K  E+   KA   A +   AAA    G     +R++ G
Sbjct: 724 RDNLLDKLGALLERN---RSLEKELEQLKAKAASAAGDDLSAAAVEIKGAKVLAARLD-G 779

Query: 873 LDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQ 932
           LD  A+   V ++  + G  V++    E   K V+ AGV +  D + QL+  E L     
Sbjct: 780 LDGKALLALVDQLKNKLGRAVILLGG-ELDGKVVLVAGVTQ--DLTGQLKAGE-LMKQAA 835

Query: 933 PLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
              G  G G+  +A G GT+AA++  A+ LA  F    L
Sbjct: 836 AAVGGKGGGRPDMAQGGGTNAAKLDEALALAQRFVEQGL 874


>gi|296390743|ref|ZP_06880218.1| alanyl-tRNA synthetase [Pseudomonas aeruginosa PAb1]
 gi|416883764|ref|ZP_11922176.1| alanyl-tRNA synthetase [Pseudomonas aeruginosa 152504]
 gi|334834490|gb|EGM13446.1| alanyl-tRNA synthetase [Pseudomonas aeruginosa 152504]
          Length = 874

 Score =  620 bits (1599), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 386/939 (41%), Positives = 535/939 (56%), Gaps = 94/939 (10%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F +FFE+K H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLRFFEEKGHTRVASSSLIPANDPTLLFTNAGMNQFKDCFLGL-----EKRAY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           TRA  +QKC+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT  K
Sbjct: 58  TRATTSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWEFLTGEK 117

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFW 228
              LP ++L+ T +        A D+EA DIW K   +PA R++  G         DNFW
Sbjct: 118 WLNLPKEKLWVTVY--------ATDDEAYDIWTKEVGVPAERMVRIGDNKGAPYASDNFW 169

Query: 229 EMGDTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKP 284
            MGDTGPCGPC+EI +D      G    +     D    IEIWN VF+QFNR +DG + P
Sbjct: 170 AMGDTGPCGPCTEIFFDHGPEIWGGPPGSP--EEDGDRYIEIWNNVFMQFNRTADGVMHP 227

Query: 285 LPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVD 344
           LPA  VDTG+G ER++++LQ+  SNY+ D+F  +  A  +A G          DDA  + 
Sbjct: 228 LPAPSVDTGMGLERVSAVLQHVHSNYEIDLFQNLLKASAEAIG-------CANDDAPSL- 279

Query: 345 MAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNI 404
              +VVADHIR+ SF IADG  P NEGR YVLRRI+RRA R+G++ L A+  FF+ +V  
Sbjct: 280 ---KVVADHIRSCSFLIADGVLPSNEGRGYVLRRIIRRACRHGNK-LGARGTFFHKIVAA 335

Query: 405 VVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFI 464
           +V  MGD FPELKQ++AHI  ++  EE  F KTL +G++  ++   ++QG V+ G   F 
Sbjct: 336 LVAEMGDAFPELKQQQAHIERVLKTEEEQFAKTLEQGLKILEQDLAELQGSVIPGNVVFK 395

Query: 465 LWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAA 524
           L+DTYGFP+DLT  +A ER L +D +GF   M+  RER+R      A  A  MD ++   
Sbjct: 396 LYDTYGFPVDLTNDIARERELTIDEDGFEREMEAQRERAR------ASSAFGMDYNS--- 446

Query: 525 LHKRGVLATDDSFKFIWFQDHKSV--IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQG 582
                ++  D   +F+ +Q       I A++   + +E +  G E  +VL  + FYAE G
Sbjct: 447 -----LVKVDGETRFLGYQGVSGAGQIVALFRDGQAVERLEEGEEGVVVLDQTPFYAESG 501

Query: 583 GQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIA 642
           GQ+ D G++E     F VR+    GG  +H G +    G  SVG  V  +VD   R+  A
Sbjct: 502 GQVGDSGYLEAAGVRFDVRDTTKAGGAHLHHGVVAR--GNLSVGAAVKAEVDASVRQATA 559

Query: 643 PNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIK 702
            NH+ TH+L+ ALR+VLG+HV QKGS+V  ++LRFDFSH + +  E L+ +E IVN +I+
Sbjct: 560 LNHSATHLLHAALRQVLGEHVQQKGSLVDSQRLRFDFSHFEAIKAEQLKALEDIVNAEIR 619

Query: 703 AELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAE 762
              +V ++E  +  AK   G  A+FGE Y D VRV+++G                  S E
Sbjct: 620 RNTEVETEETDIDTAKA-KGAMALFGEKYGDQVRVLSMGG---------------DFSVE 663

Query: 763 LCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVT--TGLAY------KAFEAACSLEKE 814
           LCGGTH+S T +   F + SE G+A G+RRI AVT    LAY      +  EAA  ++  
Sbjct: 664 LCGGTHVSRTGDIGLFKITSEGGVAAGVRRIEAVTGAAALAYLNGAEEQLKEAASLVKGS 723

Query: 815 VDDASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAAS--NGKPFCISRVEVG 872
            D+     G+LLE+N   ++ +K  E+   KA   A +   AAA    G     +R++ G
Sbjct: 724 RDNLLDKLGALLERN---RSLEKELEQLKAKAASAAGDDLSAAAVEIKGAKVLAARLD-G 779

Query: 873 LDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQ 932
           LD  A+   V ++  + G  V++    E   K V+ AGV +  D + QL+  E L     
Sbjct: 780 LDGKALLALVDQLKNKLGRAVILLGG-ELDGKVVLVAGVTQ--DLTGQLKAGE-LMKQAA 835

Query: 933 PLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
              G  G G+  +A G GTDAA++  A+ LA  F    L
Sbjct: 836 AAVGGKGGGRPDMAQGGGTDAAKLDEALALAQRFVEQGL 874


>gi|194333146|ref|YP_002015006.1| alanyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
 gi|194310964|gb|ACF45359.1| alanyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
          Length = 885

 Score =  620 bits (1599), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 346/755 (45%), Positives = 459/755 (60%), Gaps = 75/755 (9%)

Query: 63  VRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRA 122
           +R +F  +F  K H   +S+PV+P  DPTLLF NAGMNQ+K +FL            +RA
Sbjct: 6   IRQSFLDYFSAKGHKIVRSAPVIPAEDPTLLFTNAGMNQFKDVFLDKGS-----RPYSRA 60

Query: 123 CNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLP 182
            +TQKC+RA GKHNDL+DVG+DTYHHTFFEMLGNWSFGDY+K EAI WAWELLT V++LP
Sbjct: 61  VDTQKCMRASGKHNDLEDVGRDTYHHTFFEMLGNWSFGDYYKKEAIAWAWELLTDVWKLP 120

Query: 183 ADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPCSEI 242
            DRLYAT +  DE++ L    E        +    ++ FG KDNFWEMG+TGPCGPCSEI
Sbjct: 121 KDRLYATVYKDDEESFLIWQQETD------IDPDHIMKFGDKDNFWEMGETGPCGPCSEI 174

Query: 243 HYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSI 302
           H D T +   A LVN  D   IE+WN+VFIQ+NR +DGSL PLP KHVDTG+GFER+T++
Sbjct: 175 HIDLTDDSSGAPLVNAGDYRVIELWNLVFIQYNRMADGSLDPLPKKHVDTGMGFERVTAV 234

Query: 303 LQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIA 362
           LQ K SNYDTD+F P+F+AI + TG   Y+  +  +     D+A RV+ADH R L+FAI 
Sbjct: 235 LQGKRSNYDTDIFYPLFEAITEVTGV-TYNASLDGEQ----DIAMRVIADHARALTFAIT 289

Query: 363 DGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAH 422
           DG+ PGNEGR YVLRRILRRA+RY  + L +++     LV ++ + MGDVFPEL+Q++  
Sbjct: 290 DGAMPGNEGRGYVLRRILRRALRYARK-LDSREPMIYKLVGVIARTMGDVFPELQQQQET 348

Query: 423 IREIIAAEEASFGKTLLKGIEKF---KKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQLM 479
           +++I+ +EE SF  TL +G+E F    KA +   GK + G+DAF L+DTYGFP+DLT+LM
Sbjct: 349 VQKIVKSEEESFLSTLDRGMEIFGDITKAVKADNGKEIKGEDAFRLYDTYGFPIDLTRLM 408

Query: 480 AEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSFKF 539
           A E GL +D +GF+  M E + R+R            MD        K   LA  ++ ++
Sbjct: 409 AAEVGLDIDEKGFDVCMQEQKTRAR------------MD-------RKEKQLAASETGEW 449

Query: 540 IWFQDHKSVIKAIYTGSEFIES-------VVPGNEVGIVLASSSFYAEQGGQIFDEGFIE 592
           +W +   +    ++ G E +ES        V G+++ +VL  + FYAE GGQ  D G IE
Sbjct: 450 LWLE---TPSPTVFVGYETLESDARIVGVKVVGDQLQLVLDRTPFYAESGGQTGDRGVIE 506

Query: 593 GLFGSFYVRNVQIYGGFVIHIGSLTE----------GAGRFSVGEEVICKVDYDRRKLIA 642
               S  V + Q  G   +HI +  +           A  FS    V   VD   R    
Sbjct: 507 AEGYSVEVVDTQKDGDMTVHIAATVQDRHTGEQIDPAAIDFSASVAVQVSVDRQSRLATE 566

Query: 643 PNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIK 702
            NHT TH+L+ ALR+VLG HV QKGS+V P++LRFDFSH + V    L+ +E+ VNE+I+
Sbjct: 567 RNHTATHLLHAALRKVLGKHVQQKGSLVGPDRLRFDFSHFEKVSARELQLVEAEVNERIR 626

Query: 703 AELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAE 762
              ++        E     G  A FG+ Y D VRVV +                  +S E
Sbjct: 627 EAGELVKHADIPYEEALEKGALAFFGDKYADLVRVVEVP----------------GVSIE 670

Query: 763 LCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVT 797
           LCGGTH+SN      F ++SE  +A GIRRI A+T
Sbjct: 671 LCGGTHVSNVGRIGLFKIVSESSVAAGIRRIEALT 705


>gi|296133407|ref|YP_003640654.1| alanyl-tRNA synthetase [Thermincola potens JR]
 gi|296031985|gb|ADG82753.1| alanyl-tRNA synthetase [Thermincola potens JR]
          Length = 884

 Score =  619 bits (1596), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 330/749 (44%), Positives = 461/749 (61%), Gaps = 58/749 (7%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
             ++R+ F KFFE+K H    SS +VP +DPTLLF NAGMNQ+K +FLG           
Sbjct: 3   GNEIREKFLKFFENKGHTIIASSSLVPHDDPTLLFTNAGMNQFKEVFLGL-----DRRPY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            RA  +QKC+RAGGKHNDLD VG+   HHTFFEMLGN+SFGDYFK EAI +AW+ LT+  
Sbjct: 58  KRATTSQKCVRAGGKHNDLDTVGRTARHHTFFEMLGNFSFGDYFKREAITYAWQFLTEEL 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF--LPASRVLPFGCKDNFWEMGDTGPCG 237
            LP DRLYAT +  DE        EA  +W +   LP  RV+  G KDNFW MGDTGPCG
Sbjct: 118 GLPKDRLYATVYRDDE--------EAAQLWQEIAGLPPERVIRLGEKDNFWSMGDTGPCG 169

Query: 238 PCSEIHYDRTGN----RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTG 293
           PCSE+  DR        D  ++   D    +EIWN+VF+Q+NR+  G + PLP   +DTG
Sbjct: 170 PCSEVLIDRGEEFKCAADNCAIGACDCDRWLEIWNLVFMQYNRDESGEMTPLPKPSIDTG 229

Query: 294 LGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADH 353
           +G ER+ S++Q   SN+DTD+F PI   +++ +G+  Y         D+    +RV+ADH
Sbjct: 230 MGLERIASVMQKVNSNFDTDLFKPIMAKVEELSGSVYYQ--------DERGFPFRVIADH 281

Query: 354 IRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVF 413
            R  +F I+DG  P NEGR YVLRRILRRAVR+G +VL  +  F   +V +V  +MGD +
Sbjct: 282 ARACTFLISDGVLPSNEGRGYVLRRILRRAVRFG-KVLGIEKPFLYQMVGVVADLMGDAY 340

Query: 414 PELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG---KVLSGQDAFILWDTYG 470
           PE+++++ ++ ++I  EE  F +TL +G+       + V+    + +SGQ+AF+L+DTYG
Sbjct: 341 PEIREKQTYVEQVIKIEEERFHETLHEGMRLVSDIVEKVKAEGRQSISGQEAFLLYDTYG 400

Query: 471 FPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGV 530
           FPLDLT+ +AEE GL VD +GF  AM+E R R+R+A+  +   A++   +  A + ++  
Sbjct: 401 FPLDLTEDIAEEHGLTVDKDGFAAAMEEQRTRARAARQDE---AMLAGQELYAEVGQK-- 455

Query: 531 LATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGF 590
           L   +   +   +   +V+ A+    EF   V  G +V +++  + FY E GGQ+ D G 
Sbjct: 456 LGATEFTGYSELETRANVV-ALIVDKEFRHEVRAGEQVEVIMDRTCFYGESGGQVGDRGI 514

Query: 591 IEGLFGSFY--VRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
           +E   G+        + + G ++H+G++ +     S G+ +  +VD  RRK IA NH+ T
Sbjct: 515 LESNRGAVIKVTDTKKTFNGLMVHLGTVEKDI--VSFGDVMDARVDARRRKQIARNHSVT 572

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+L+ AL+EVLGDHV+Q GS+V PE+LRFDF+H + V PE L+++E  VNE I A LDV 
Sbjct: 573 HLLHKALKEVLGDHVNQAGSLVEPERLRFDFTHFRAVTPEELQKVEDRVNEMILANLDVH 632

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
           + E +L EAK + G  A+FGE Y + VRVV +G                  S ELCGGTH
Sbjct: 633 AFETSLDEAKAL-GATALFGEKYGEKVRVVKMG----------------DYSMELCGGTH 675

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVT 797
           L +T EA  F +LSE GI  G+RRI AVT
Sbjct: 676 LRSTGEAGLFKILSESGIGAGLRRIEAVT 704


>gi|433658625|ref|YP_007276004.1| Alanyl-tRNA synthetase [Vibrio parahaemolyticus BB22OP]
 gi|432509313|gb|AGB10830.1| Alanyl-tRNA synthetase [Vibrio parahaemolyticus BB22OP]
          Length = 860

 Score =  619 bits (1596), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 377/921 (40%), Positives = 515/921 (55%), Gaps = 100/921 (10%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR+ F KFFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRNAFLKFFESKGHQIVESSSLVPHNDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT V +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAISFAWEFLTDVLKL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           PADRL  T +          D+EA DIW K   +PA R++  G K        DNFW+MG
Sbjct: 122 PADRLLVTVY--------ETDDEAFDIWNKKVGVPADRIIRIGDKKGGKPYESDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
           DTGPCGPC+EI YD      G R        D    IEIWN VF+QFNR +DG+++PLP 
Sbjct: 174 DTGPCGPCTEIFYDHGEHIWGGRPGTP--EEDGDRFIEIWNNVFMQFNRHADGTMEPLPK 231

Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
             VDTG+G ER+++I+Q   SNY+ DVF  +  A  +  G    S           + + 
Sbjct: 232 PSVDTGMGIERISAIMQGVHSNYEIDVFQALIKAAAEVIGYEDLS-----------NQSL 280

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RV+ADHIR+ SF I DG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF+ LV ++  
Sbjct: 281 RVIADHIRSCSFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGAFFHKLVGVLAD 339

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWD 467
           +MG    ELK+++A + +++  EE +FG+TL +G+    +A  ++ GKVL G+  F L+D
Sbjct: 340 IMGTAGEELKRQQAVVEKVLRIEEENFGRTLERGMAILNEALDNLDGKVLDGETVFKLYD 399

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
           TYGFP DLT  +A ER   +D EGF  AM+E R+R+R A      G    D +A      
Sbjct: 400 TYGFPADLTNDVAREREFAIDEEGFEKAMEEQRQRAREA------GQFGTDYNAA----- 448

Query: 528 RGVLATDDSFKFIWFQDHK--SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
              +  D   +F  +   K  S + A++     ++S+  G++  IVL  + FYAE GGQ 
Sbjct: 449 ---IKVDTQTEFCGYVGTKGSSSVAAMFVEGNEVDSISAGDKAIIVLGETPFYAESGGQC 505

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D G I    G F V + Q  G  + H G + EG    + G+EV   VD +RR  I+ NH
Sbjct: 506 GDAGEIRTEAGVFRVEDTQKLGNAIAHHGVMAEGV--LAKGDEVATIVDAERRAAISLNH 563

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+L+ ALR+VLG+HV QKGS+V  E LRFDFSH + V    L+ +E +VN QI+   
Sbjct: 564 SATHLLHAALRQVLGEHVTQKGSLVKAENLRFDFSHLEAVTAAELKEVERLVNAQIRRNH 623

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    +  AK   G  A+FGE Y D VRV+++G                  S ELCG
Sbjct: 624 VIETNVMDIESAKK-KGAMALFGEKYDDEVRVLSMG----------------DFSTELCG 666

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSL 825
           G H SNT +   F + SE GIA GIRRI AVT   A  A EA          A+K E  L
Sbjct: 667 GIHASNTGDIGLFKITSESGIAAGIRRIEAVTGEAALDAIEA---------QAAKYEEKL 717

Query: 826 LEKNQVRKAQKKVAEENLQK------AVKVATETAEAAASNGKPFCISRVEVGLDAAAVR 879
            E  Q    + K  E+ LQK      A + A    +A   NG    ++ +E G D+  +R
Sbjct: 718 AESAQ----KAKTLEKELQKLKDKMAAAESANIMGKAVEVNGTKVLVAALE-GADSKNLR 772

Query: 880 EAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCG 939
             V  +  Q G  V++ + + T +K  + AGV +  D   +++  + +    + + G+ G
Sbjct: 773 TMVDDIKNQMGSGVVLLA-NVTDDKVGLIAGVTK--DLVGKVKAGDLVKMVAEQVGGKGG 829

Query: 940 KGKGGLASGQGTDAAQVTPAM 960
            G+  +A   GTD + +  A+
Sbjct: 830 -GRPDMAQAGGTDVSALPEAI 849


>gi|313105787|ref|ZP_07792050.1| alanyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
 gi|386064627|ref|YP_005979931.1| alanyl-tRNA synthetase [Pseudomonas aeruginosa NCGM2.S1]
 gi|310878552|gb|EFQ37146.1| alanyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
 gi|348033186|dbj|BAK88546.1| alanyl-tRNA synthetase [Pseudomonas aeruginosa NCGM2.S1]
          Length = 874

 Score =  619 bits (1595), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 385/939 (41%), Positives = 535/939 (56%), Gaps = 94/939 (10%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F +FFE+K H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLRFFEEKGHTRVASSSLIPANDPTLLFTNAGMNQFKDCFLGL-----EKRAY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           TRA  +QKC+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT  K
Sbjct: 58  TRATTSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWEFLTGEK 117

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFW 228
              LP ++L+ T +        A D+EA DIW K   +PA R++  G         DNFW
Sbjct: 118 WLNLPKEKLWVTVY--------ATDDEAYDIWTKEVGVPAERMVRIGDNKGAPYASDNFW 169

Query: 229 EMGDTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKP 284
            MGDTGPCGPC+EI +D      G    +     D    IEIWN VF+QFNR +DG + P
Sbjct: 170 AMGDTGPCGPCTEIFFDHGPEIWGGPPGSP--EEDGDRYIEIWNNVFMQFNRTADGVMHP 227

Query: 285 LPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVD 344
           LPA  VDTG+G ER++++LQ+  SNY+ D+F  +  A  +A G          DDA  + 
Sbjct: 228 LPAPSVDTGMGLERVSAVLQHVHSNYEIDLFQNLLKASAEAIG-------CANDDAPSL- 279

Query: 345 MAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNI 404
              +VVADHIR+ SF IADG  P NEGR YVLRRI+RRA R+G++ L A+  FF+ +V  
Sbjct: 280 ---KVVADHIRSCSFLIADGVLPSNEGRGYVLRRIIRRACRHGNK-LGARGTFFHKIVAA 335

Query: 405 VVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFI 464
           +V  MGD FPELKQ++AHI  ++  EE  F KTL +G++  ++   ++QG V+ G   F 
Sbjct: 336 LVAEMGDAFPELKQQQAHIERVLKTEEEQFAKTLEQGLKILEQDLAELQGSVIPGNVVFK 395

Query: 465 LWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAA 524
           L+DTYGFP+DLT  +A ER L +D +GF   M+  RER+R      A  A  MD ++   
Sbjct: 396 LYDTYGFPVDLTNDIARERELTIDEDGFEREMEAQRERAR------ASSAFGMDYNS--- 446

Query: 525 LHKRGVLATDDSFKFIWFQDHKSV--IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQG 582
                ++  D   +F+ +Q       I A++   + +E +  G E  +VL  + FYAE G
Sbjct: 447 -----LVKVDGETRFLGYQGVSGAGQIVALFRDGQAVERLEEGEEGVVVLDQTPFYAESG 501

Query: 583 GQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIA 642
           GQ+ D G++E     F VR+    GG  +H G +    G  SVG  V  +VD   R+  A
Sbjct: 502 GQVGDSGYLEAAGVRFDVRDTTKAGGAHLHHGVVAR--GNLSVGAAVKAEVDASVRQATA 559

Query: 643 PNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIK 702
            NH+ TH+L+ ALR+VLG+HV QKGS+V  ++LRFDFSH + +  E L+ +E IVN +I+
Sbjct: 560 LNHSATHLLHAALRQVLGEHVQQKGSLVDSQRLRFDFSHFEAIKAEQLKALEDIVNAEIR 619

Query: 703 AELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAE 762
              +V ++E  +  AK   G  A+FGE Y D VRV+++G                  S E
Sbjct: 620 RNTEVETEETDIDTAKA-KGAMALFGEKYGDQVRVLSMGG---------------DFSVE 663

Query: 763 LCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVT--TGLAY------KAFEAACSLEKE 814
           LCGGTH+S T +   F + SE G+A G+RRI AVT    LAY      +  EAA  ++  
Sbjct: 664 LCGGTHVSRTGDIGLFKITSEGGVAAGVRRIEAVTGAAALAYLNGAEEQLKEAASLVKGS 723

Query: 815 VDDASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAAS--NGKPFCISRVEVG 872
            D+     G+LLE+N   ++ +K  E+   KA   A +   AAA    G     +R++ G
Sbjct: 724 RDNLLDKLGALLERN---RSLEKELEQLKAKAASAAGDDLSAAAVEIKGAKVLAARLD-G 779

Query: 873 LDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQ 932
           LD  A+   V ++  + G  V++    E   K V+ AGV +  D + QL+  E L     
Sbjct: 780 LDGKALLALVDQLKNKLGRAVILLGG-ELDGKVVLVAGVTQ--DLTGQLKAGE-LMKQAA 835

Query: 933 PLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
              G  G G+  +A G GT+AA++  A+ LA  F    L
Sbjct: 836 AAVGGKGGGRPDMAQGGGTNAAKLDEALALAQRFVEQGL 874


>gi|343083356|ref|YP_004772651.1| alanyl-tRNA synthetase [Cyclobacterium marinum DSM 745]
 gi|342351890|gb|AEL24420.1| alanyl-tRNA synthetase [Cyclobacterium marinum DSM 745]
          Length = 878

 Score =  619 bits (1595), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 370/933 (39%), Positives = 518/933 (55%), Gaps = 77/933 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R  F  FF+ K H    S+P+V  NDPTL+F NAGMNQ+K  FLG  +P       
Sbjct: 3   SKQIRSHFIDFFQSKAHQFVPSAPIVVKNDPTLMFTNAGMNQFKDYFLGNENPEH----- 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  N+QKC+R  GKHNDL++VG DTYHHT FEM+GNWSFGDYFK +AI WAWELLT+VY
Sbjct: 58  IRVTNSQKCLRVSGKHNDLEEVGVDTYHHTMFEMMGNWSFGDYFKKDAINWAWELLTEVY 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +LP DRLY T FGGD    L  D+EA D W + +   R+L    KDNFWEMG+TGPCGPC
Sbjct: 118 QLPKDRLYITVFGGDHVDQLEQDDEAFDYWAELVEKDRILFCSKKDNFWEMGETGPCGPC 177

Query: 240 SEIHYDRTGNRD-----AASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH+D     +        LVN D P  IEIWN+VF+QFNR +DG LK LPAKHVDTGL
Sbjct: 178 SEIHFDMRPLEEIKQIPGRELVNEDHPQVIEIWNLVFMQFNRFADGHLKELPAKHVDTGL 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           G ERL  ++QNK SNYDTD+F P F A  +A     Y       +++K+D+A+RV+ DHI
Sbjct: 238 GLERLVRVIQNKSSNYDTDLFTP-FIAKMEAISGFTYG------ESEKIDIAFRVIVDHI 290

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R +SF IADG  P N    YV+RRILRRAVRYG   L  +  F   LV ++ +  G+ +P
Sbjct: 291 RAISFTIADGQLPSNNKAGYVIRRILRRAVRYGYTFLDLKKPFLFNLVAVLAEKFGEFYP 350

Query: 415 ELKQREAHIREIIAAEEASFGKTL---LKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGF 471
           E+  ++  I ++I  EE +F +TL   LK +E  +K   D     + G+ AF L+DTYGF
Sbjct: 351 EINSQQDFITKVIQEEELAFLRTLDKGLKNLESIQKGLADKNENTIPGEVAFELYDTYGF 410

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT L+A E GL VD +GF+ AM   +ERSRSA   + G  I+++ + ++       L
Sbjct: 411 PLDLTSLIARENGLSVDEKGFSAAMKAQKERSRSASKLETGDWIMVNEEESSVFVGYDTL 470

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            T         Q  K           F           +VL ++ FYAE GGQ+ D G +
Sbjct: 471 ETTA-------QIIKYRKIKDKKKDRF----------QLVLTATPFYAESGGQVGDTGTL 513

Query: 592 EGLFGSFYVRNVQIYGGFVIH-IGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHM 650
                   V +       ++H + +L +       G+     VD ++R+LI  NHT TH+
Sbjct: 514 SNDEERITVLDTTKENDLIVHWVSALPKNPEADFKGQ-----VDAEKRRLIKSNHTATHL 568

Query: 651 LNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSK 710
           L  AL++VLG+HV QKGS+V  + LRFDFSH   + PE + ++E IVN +I+  + +  K
Sbjct: 569 LQSALKQVLGEHVQQKGSLVNEKILRFDFSHFAKLSPEEILQVEDIVNGKIRENIALDEK 628

Query: 711 E-ATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
               + EAK + G  A+FGE Y + VRV+           +P      S S ELCGGTH+
Sbjct: 629 RNVPINEAKAM-GATALFGEKYGEQVRVITF---------NP------SYSVELCGGTHV 672

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK--------I 821
           + T E   F + SE  I+ G+RRI AVT   A    +   +L +E+ +  K        I
Sbjct: 673 AATGEIGLFKITSESSISAGVRRIEAVTARGAEDYVKKQFALLEEIQETLKHPRDLVAAI 732

Query: 822 EGSLLEKNQVRKAQKKVAEENLQKAVKVATET--AEAAASNGKPFCISRVEVGLDAAAVR 879
           EG + E+  +RK  + +     QKA +   ET  +E  + NG    +  +++  +A A++
Sbjct: 733 EGMMTERAALRKEIEVLN----QKATEKIKETLKSEVKSFNGYNLILGLIKLP-NAEALK 787

Query: 880 EAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCG 939
           +   ++  +    V V + D    K  +   V +   + K L     +    + +KG  G
Sbjct: 788 KLSFELKNEIENLVAVLAAD-INGKPQLAIVVNDLLVKDKGLHAGNMVRELAREIKG-GG 845

Query: 940 KGKGGLASGQGTDAAQVTPAMDLAAEFAAMKLR 972
            G+   A+  G D++ +  A++ A       L+
Sbjct: 846 GGQPFFATAGGKDSSGLPTALEKAETLLQQALK 878


>gi|397616293|gb|EJK63916.1| hypothetical protein THAOC_15401 [Thalassiosira oceanica]
          Length = 769

 Score =  619 bits (1595), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 351/746 (47%), Positives = 463/746 (62%), Gaps = 64/746 (8%)

Query: 230 MGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKH 289
           MGDTGPCGPCSE+HYDR GNRDA+SLVN DDP  IEIWN+VFIQFNR+ +G L PLPAKH
Sbjct: 1   MGDTGPCGPCSELHYDRIGNRDASSLVNEDDPDVIEIWNLVFIQFNRDENG-LTPLPAKH 59

Query: 290 VDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRV 349
           +DTG+G ERL S+LQ+K SNYD D F PIFD I++  G   Y GK+G +D+   D AYR 
Sbjct: 60  IDTGMGLERLCSLLQDKSSNYDIDAFTPIFDEIERLAGVGGYEGKLGEEDSTLKDTAYRA 119

Query: 350 VADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVM 409
           VADH RTL+FA+ADG+ P NEGR YVLRRILRRA RYG ++LK + GFF  LV +VV+  
Sbjct: 120 VADHARTLTFALADGAVPDNEGRGYVLRRILRRATRYGQQILKCEPGFFAKLVPVVVETY 179

Query: 410 GDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTY 469
           GD +PELKQ +A+I EI+  EE +F   L +GI+ F++   D + K++SG  AF L+DT 
Sbjct: 180 GDAYPELKQNQANIIEIVKEEEEAFSTMLDRGIKYFEEEINDSKSKIVSGGQAFFLYDTL 239

Query: 470 GFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQ---NKQAGGAIVMDADATAALH 526
           GFP+DLT+LMAEE G+ VD++GF   M+  ++RSR A+      AG  +   A+ TA L 
Sbjct: 240 GFPIDLTELMAEEAGMSVDMKGFEGEMEGQKKRSRDARLASKGLAGERLEFIAEQTAWLA 299

Query: 527 KRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFI---ESVVPGNEVGIVLASSSFYAEQGG 583
             G+  TDDS K++W +  +S ++AI+T   F+   ++   GN VG+VL  SSFYAE GG
Sbjct: 300 DEGIAVTDDSAKYLWDEGLESSVRAIFTADGFLKEGDAAEAGNTVGLVLDKSSFYAEAGG 359

Query: 584 QIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAP 643
           Q  D G I    G   V +VQ+YGG+++H G ++EG    SVG+ V C+V+YDRR+ IAP
Sbjct: 360 QDADIGTISFDGGEVVVNDVQVYGGYILHSGVISEGT--LSVGDSVTCQVEYDRRRDIAP 417

Query: 644 NHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKA 703
           NH+ TH+LN ALREVLGD  DQ+GS    EKLRFDFSH K + P  LR  E+ V E I  
Sbjct: 418 NHSMTHVLNAALREVLGDGCDQRGSQCNDEKLRFDFSHKKAMTPAQLRDTETYVKEIIGR 477

Query: 704 ELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAEL 763
            L V ++   L +AK I G+RA+FGEVYPDPVRVV +G                  S E 
Sbjct: 478 SLPVSAEVMPLDDAKAIPGVRAMFGEVYPDPVRVVKVGD---------------DCSVEF 522

Query: 764 CGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFE----------------- 806
           CGGTH+SNT EAEAF L  E  +AKGIRRITA+T   A +A E                 
Sbjct: 523 CGGTHISNTAEAEAFVLTEETAVAKGIRRITALTREAAVRAIEEGSKLTDRTAALEAIRA 582

Query: 807 --------AACSLEKEVDDA---SKIEGSLLEK-NQVRK----AQKKVAEENLQKAVKVA 850
                    A +L K+VD A   + ++  L  +  QV+K    A+K++    + K +   
Sbjct: 583 DDTPDLDKQAGALRKDVDSAEFSAALKAELRARIEQVQKKGIEAKKRLLAGRVDKCLNTV 642

Query: 851 TETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVF---STDET-TNKAV 906
               E A + GK   +  +++G D+ A ++ +  V  QK  P + F   S +E  +   +
Sbjct: 643 KADVETALAEGKRTLVLNLDIGADSKASQKVIKAV--QKIAPDLAFMGISEEEAGSGGKI 700

Query: 907 VC-AGVPEKSDQSKQLEVSEWLTAAL 931
           +C A VPE       L+ +EWL   L
Sbjct: 701 LCFAIVPEGVTDDTGLKANEWLKDVL 726


>gi|291513841|emb|CBK63051.1| alanyl-tRNA synthetase [Alistipes shahii WAL 8301]
          Length = 873

 Score =  619 bits (1595), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 356/805 (44%), Positives = 462/805 (57%), Gaps = 93/805 (11%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + K+R  F  FFE K H    S+P+V   DPTL+F NAGMNQ+K IFLG A       K 
Sbjct: 3   SNKIRQAFLDFFESKGHAIVPSAPMVVKGDPTLMFTNAGMNQFKDIFLGNAP-----RKY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            RA +TQKC+R  GKHNDL++VG DTYHHT FEMLGNWS+GDYFK EAIEWAWELL  VY
Sbjct: 58  PRAADTQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSYGDYFKKEAIEWAWELLHGVY 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
            LPA+R+YAT F G E+ G+  D EA D WL++LPA  ++     DNFWEMG+TGPCGPC
Sbjct: 118 GLPAERMYATVFEGSEEDGVPFDQEAYDYWLRYLPADHIIRGNKHDNFWEMGETGPCGPC 177

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH+D     + A+     +VN   P  IEIWN+VF+QFNR+++GSL+ LPA++VDTG+
Sbjct: 178 SEIHFDLRDEAEIAAKPGREMVNASHPQVIEIWNLVFMQFNRKANGSLEELPARNVDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL  ILQ K SNYDTDVF P    I + +G      K G D   K D+A RV+ADH+
Sbjct: 238 GFERLCMILQGKKSNYDTDVFQPTIGRIAEMSGK-----KYGEDR--KADVAMRVIADHL 290

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R ++F+IADG  P N    YV+RRILRRAVRYG   L   +     LV  +V  MG  FP
Sbjct: 291 RAIAFSIADGQLPSNVKAGYVIRRILRRAVRYGYTYLGFTEPTLCRLVPGLVGQMGGQFP 350

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK---VLSGQDAFILWDTYGF 471
           ELK ++  I ++I  EE+SF +TL  GI          +G+   ++SG+DAF L+DT+GF
Sbjct: 351 ELKAQQGLIEKVIEEEESSFLRTLATGINLLDGVISRTKGEGKELISGKDAFELYDTFGF 410

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           P+DLT+L+A E+G+ VD+  F   +   +ERSR+A                        +
Sbjct: 411 PIDLTELIAREQGVGVDLAAFEKELQAQKERSRNA----------------------AAV 448

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVP-----------GNEVGIVLASSSFYAE 580
            TDD  +         + ++++TG + +   V                 +V   + FY  
Sbjct: 449 DTDDWVELF------PIRESVFTGYDTLTEKVRIARYRRVTSKGKTSYQLVFDRTPFYGN 502

Query: 581 QGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHI-GSLTEGAGRFSVGEEVICKVDYDRRK 639
            GGQ+ D G IE       V   +   G +IHI   L E         E   +VD ++R+
Sbjct: 503 SGGQVGDIGMIESANERIPVVATEKENGLIIHIVNQLPENPA-----AEFTARVDPEKRQ 557

Query: 640 LIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNE 699
             A NHT TH+++ ALR+VLG HV+QKGS+V PE LRFDFSH + V PE LR++E +VN 
Sbjct: 558 AAANNHTATHLMHEALRKVLGAHVEQKGSLVTPEILRFDFSHFQKVTPEELRKVEQLVNR 617

Query: 700 QIKAELD-VFSKEATLAEA-KCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWL 757
            I+A    V ++EAT  EA KC  G   +FGE Y D VR+V  G                
Sbjct: 618 AIRANYPLVENREATKEEAEKC--GAMMLFGEKYGDKVRMVRFGS--------------- 660

Query: 758 SISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDD 817
             S ELCGGTH   T     F +LSE  I+ G+RRI AVT   A K   AA       +D
Sbjct: 661 --SVELCGGTHTGATGNIGFFKILSESAISAGVRRIEAVTGEQAEKVLYAA-------ED 711

Query: 818 ASKIEGSLLEKNQVRKAQKKVAEEN 842
             +     L   QV +A KK+ E N
Sbjct: 712 TMRNIAEYLNNPQVVQAVKKMLESN 736


>gi|28899322|ref|NP_798927.1| alanyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|153839216|ref|ZP_01991883.1| alanyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|260878987|ref|ZP_05891342.1| alanine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|260895460|ref|ZP_05903956.1| alanine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|260903524|ref|ZP_05911919.1| alanine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|417318955|ref|ZP_12105513.1| alanyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
 gi|31076994|sp|Q87LR3.1|SYA_VIBPA RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|28807546|dbj|BAC60811.1| alanyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|149747281|gb|EDM58267.1| alanyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|308088224|gb|EFO37919.1| alanine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|308090433|gb|EFO40128.1| alanine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|308108704|gb|EFO46244.1| alanine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|328474145|gb|EGF44950.1| alanyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
          Length = 860

 Score =  618 bits (1593), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 377/921 (40%), Positives = 515/921 (55%), Gaps = 100/921 (10%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR+ F KFFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRNAFLKFFESKGHQIVESSSLVPHNDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT V +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAISFAWEFLTDVLKL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           PADRL  T +          D+EA DIW K   +PA R++  G K        DNFW+MG
Sbjct: 122 PADRLLVTVY--------ETDDEAFDIWNKKVGVPADRIIRIGDKKGGKPYESDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
           DTGPCGPC+EI YD      G R        D    IEIWN VF+QFNR +DG+++PLP 
Sbjct: 174 DTGPCGPCTEIFYDHGEHIWGGRPGTP--EEDGDRFIEIWNNVFMQFNRHADGTMEPLPK 231

Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
             VDTG+G ER+++I+Q   SNY+ DVF  +  A  +  G    S           + + 
Sbjct: 232 PSVDTGMGIERISAIMQGVHSNYEIDVFQALIKAAAEVIGYEDLS-----------NQSL 280

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RV+ADHIR+ SF I DG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF+ LV ++  
Sbjct: 281 RVIADHIRSCSFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGAFFHKLVGVLAD 339

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWD 467
           +MG    ELK+++A + +++  EE +FG+TL +G+    +A  ++ GKVL G+  F L+D
Sbjct: 340 IMGTAGEELKRQQAVVEKVLRIEEENFGRTLERGMAILNEALDNLDGKVLDGETVFKLYD 399

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
           TYGFP DLT  +A ER   +D EGF  AM+E R+R+R A      G    D +A      
Sbjct: 400 TYGFPADLTNDVAREREFAIDEEGFEKAMEEQRQRAREA------GQFGTDYNAA----- 448

Query: 528 RGVLATDDSFKFIWFQDHK--SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
              +  D   +F  +   K  S + A++     ++S+  G++  IVL  + FYAE GGQ 
Sbjct: 449 ---IKVDTQTEFCGYVGTKGSSSVAAMFVEGNEVDSLSAGDKAIIVLGETPFYAESGGQC 505

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D G I    G F V + Q  G  + H G + EG    + G+EV   VD +RR  I+ NH
Sbjct: 506 GDAGEIRTEAGVFRVEDTQKLGNAIAHHGVMAEGV--LAKGDEVATIVDAERRAAISLNH 563

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+L+ ALR+VLG+HV QKGS+V  E LRFDFSH + V    L+ +E +VN QI+   
Sbjct: 564 SATHLLHAALRQVLGEHVTQKGSLVKAENLRFDFSHLEAVTAAELKEVERLVNAQIRRNH 623

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    +  AK   G  A+FGE Y D VRV+++G                  S ELCG
Sbjct: 624 VIETNVMDIESAKK-KGAMALFGEKYDDEVRVLSMG----------------DFSTELCG 666

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSL 825
           G H SNT +   F + SE GIA GIRRI AVT   A  A EA          A+K E  L
Sbjct: 667 GIHASNTGDIGLFKITSESGIAAGIRRIEAVTGEAALDAIEA---------QAAKYEEKL 717

Query: 826 LEKNQVRKAQKKVAEENLQK------AVKVATETAEAAASNGKPFCISRVEVGLDAAAVR 879
            E  Q    + K  E+ LQK      A + A    +A   NG    ++ +E G D+  +R
Sbjct: 718 AESAQ----KAKTLEKELQKLKDKMAAAESANIMGKAVEVNGTKVLVAALE-GADSKNLR 772

Query: 880 EAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCG 939
             V  +  Q G  V++ + + T +K  + AGV +  D   +++  + +    + + G+ G
Sbjct: 773 TMVDDIKNQMGSGVVLLA-NVTDDKVGLIAGVTK--DLVGKVKAGDLVKMVAEQVGGKGG 829

Query: 940 KGKGGLASGQGTDAAQVTPAM 960
            G+  +A   GTD + +  A+
Sbjct: 830 -GRPDMAQAGGTDVSALPEAI 849


>gi|332666616|ref|YP_004449404.1| alanyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100]
 gi|332335430|gb|AEE52531.1| alanyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100]
          Length = 876

 Score =  617 bits (1592), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 362/924 (39%), Positives = 517/924 (55%), Gaps = 72/924 (7%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R  F  FF  K H    S+P+V   DPTL+F NAGMNQ+K  FLG   P+ +    
Sbjct: 4   AREIRQAFLDFFASKAHKIVPSAPLVNKGDPTLMFTNAGMNQFKDYFLGNQTPDVR---- 59

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  +TQKC+R  GKHNDL+DVG D  HHT FEMLGNWSFGDYFK EAI W+WELLT V 
Sbjct: 60  -RIADTQKCLRVSGKHNDLEDVGYDGTHHTMFEMLGNWSFGDYFKEEAITWSWELLTDVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
            L  DRLYAT F GD  A + PD+EA  +WL+FLP   +L    KDNFWEMGDTGPCGPC
Sbjct: 119 GLAKDRLYATVFEGDPAANIPPDDEALSLWLRFLPQEHILYGNKKDNFWEMGDTGPCGPC 178

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           +EIH+D   + + A      LVN D+   +EIWN VFIQFNR++D SL+PLP +HVDTG+
Sbjct: 179 TEIHFDTRSDEERAKNPGRDLVNVDNSGVVEIWNNVFIQFNRKADKSLEPLPEQHVDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL  +LQ K + YDTD+F P    I++ +G + Y+     + + K D+A RV++DHI
Sbjct: 239 GFERLCMVLQEKKATYDTDIFSPFIQYIEKVSG-KKYT--FSYERSAKSDIAMRVISDHI 295

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R ++F IADG  PGN G  YV+RRILRRAVRY    L  +  F + L+ ++       FP
Sbjct: 296 RAIAFTIADGQLPGNSGAGYVIRRILRRAVRYYYSFLDIKQPFLHTLIPMLADAFSGAFP 355

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLD 474
           ELK ++A +  II +EE +F  TL KG+++F   A D     + G+DAF L+DT+GFP+D
Sbjct: 356 ELKAQQAQVARIIESEETAFLNTLEKGLKRFD--ALDTSSGQIKGEDAFDLYDTFGFPID 413

Query: 475 LTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATD 534
           LTQL+A+E  + VD+ GF  A+ + +ERSR+   K  G  + ++               D
Sbjct: 414 LTQLLAQEANIPVDMVGFEAALQKQKERSRADAAKVVGDWLSVN---------------D 458

Query: 535 DSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGL 594
              KF  +     +++A          V   ++  +VL ++ FYAE GGQ+ D+G++   
Sbjct: 459 GEVKFEGYD--TLMVEATKVLKYRTVKVKNQDQYQLVLQATPFYAESGGQVGDKGYLVIG 516

Query: 595 FGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFA 654
                V + Q     +IHI  + E     S+   V   VD + R+ ++ NH+ TH+++ A
Sbjct: 517 ADRINVLDTQKENDLIIHI--VDEFPSNLSL--PVKAVVDAEMREAVSANHSATHLMHAA 572

Query: 655 LREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATL 714
           L ++LG H  QKG  V  ++LRFDF+H + V    LR+IE +VNE+I+A + +       
Sbjct: 573 LHQILGQHATQKGQNVDSQRLRFDFNHYQKVTDAELRQIEDLVNEKIRANIPLEENRNMP 632

Query: 715 AEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTRE 774
            E    +G   +FGE Y + VR++           DP      S S ELCGGTH+  T +
Sbjct: 633 IEEARDSGAMMLFGEKYGEVVRMITF---------DP------SFSRELCGGTHIQATGQ 677

Query: 775 AEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKNQVRKA 834
              F +L+E  +A GIRRI A+T      A +A   +  E+ +   I   L  K +  +A
Sbjct: 678 IGLFKILAEGAVAAGIRRIEAIT------ATQAEAFVRSELRELDAIRSILKSKGEAARA 731

Query: 835 QKKVAEEN--LQKAVK--VATET--------AEAAASNGKPFCISRVEVGLDAAAVREAV 882
              + +EN  L+K ++  VA +         A+A   NG  F  +RV +  D AA++   
Sbjct: 732 VATLQDENKELRKEIERLVAAQALALKDGLIAKAETLNGVQFISARVPIN-DQAALKNLA 790

Query: 883 LKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGK 942
            ++  + G  V+VF      +K +V   + +   + K+L     +    + + G  G G+
Sbjct: 791 AQIDHELGNAVIVFGA-VINDKPMVMVTISKSLVEGKKLHAGNMVRELAKEIDG-GGGGQ 848

Query: 943 GGLASGQGTDAAQVTPAMDLAAEF 966
              AS  G +AA +  A+  A E 
Sbjct: 849 ANFASAGGKNAAGLDQAVAKAREM 872


>gi|409098638|ref|ZP_11218662.1| alanyl-tRNA ligase [Pedobacter agri PB92]
          Length = 871

 Score =  617 bits (1591), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 331/756 (43%), Positives = 455/756 (60%), Gaps = 63/756 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R  F  FFE K H    S+P+V  NDPTL+F NAGMNQ+K +FLG A       K 
Sbjct: 3   AQEIRQAFLSFFESKQHHVVPSAPIVVKNDPTLMFTNAGMNQFKDLFLGEA-----AIKY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  +TQ+C+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK +AI W+WELLT++Y
Sbjct: 58  ARVADTQRCLRVSGKHNDLEEVGIDTYHHTMFEMLGNWSFGDYFKKDAIAWSWELLTEIY 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           ++P D+LY TYF GDEK GL  D EA D+W +++  S +LP   KDNFWEMGDTGPCGPC
Sbjct: 118 KIPKDKLYVTYFEGDEKEGLEKDQEAYDLWKQYVDESHILPGNKKDNFWEMGDTGPCGPC 177

Query: 240 SEIHYD-RTGNR----DAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D RT       D A+LVN D P  IEIWN VF+QFNR  DGSL+ LPAKHVDTG+
Sbjct: 178 SEIHVDCRTDEEKALVDGATLVNADHPQVIEIWNNVFMQFNRLKDGSLQSLPAKHVDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL  +LQ K SNYDTDVF P+   I   +G      K GA+  +K D+A RV+ADHI
Sbjct: 238 GFERLVRVLQQKSSNYDTDVFQPMIQFIADKSGI-----KYGAN--EKTDIAMRVMADHI 290

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R ++F IADG  P N    YV+RRILRRAVRY    L  ++ F N LV ++ +    VF 
Sbjct: 291 RAIAFVIADGQLPSNNKAGYVIRRILRRAVRYAYTFLNFKEPFLNQLVPLLAEQFKGVFD 350

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLD 474
           EL  ++  +++++  EE SF +TL  GI++F++         + G  AF L DT+GFP+D
Sbjct: 351 ELISQQYFVQKVVLEEEVSFLRTLSTGIQRFERYQ--ATNNTVEGSFAFELSDTFGFPID 408

Query: 475 LTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATD 534
           LT+LMA E+G  VD+ G+  A+ + ++ SR+A     G  ++++AD  +           
Sbjct: 409 LTELMAREKGWSVDLAGYEQALKKQKDDSRAATAIDTGDWVIVNADEQS----------- 457

Query: 535 DSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNE-VGIVLASSSFYAEQGGQIFDEGFIEG 593
              +F+ + D +   + +    ++ +    G E   IVL  + FYAE GGQ+ D G +E 
Sbjct: 458 ---EFVGYDDLEIETEIL----KYRKVKAKGKEQYQIVLRQTPFYAESGGQVGDTGRLED 510

Query: 594 LFGSFYV--RNVQIYGGFVIHIGSLTEG--AGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
               F+V   + +   G  +H   +      G+F         +D D+R L   NH+ TH
Sbjct: 511 HSRQFWVDITDTKKENGLTVHFADILPDNLEGKF------WAVIDEDKRILTEDNHSATH 564

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +L+ AL++VLG+HV+QKGS+V  + LRFDFSH   V  + L +IE IVN++I+  + +  
Sbjct: 565 LLHAALKQVLGNHVNQKGSLVNADYLRFDFSHFAKVTDDELAQIEVIVNQKIRQNIKLKE 624

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
           +     +    +G+ A+FGE Y D VR++                     S ELCGGTH+
Sbjct: 625 ERDVPYQDAIESGVTALFGEKYGDFVRMITFDD---------------HFSKELCGGTHV 669

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAF 805
             T +  +F ++SE  +A G+RRI A+T   A + F
Sbjct: 670 KATGQIGSFKIVSESAVAAGVRRIEAITADKAEQYF 705


>gi|429742041|ref|ZP_19275688.1| alanine--tRNA ligase [Porphyromonas catoniae F0037]
 gi|429157682|gb|EKY00263.1| alanine--tRNA ligase [Porphyromonas catoniae F0037]
          Length = 875

 Score =  617 bits (1591), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 350/798 (43%), Positives = 466/798 (58%), Gaps = 78/798 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+++ +FF  K H    S+P+V   DP+L+F NAGMNQ+K I LG A+      K 
Sbjct: 3   SKEIRESYKEFFRSKGHQIVPSAPMVIKGDPSLMFTNAGMNQFKDIILGNAE-----IKY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI+WAWE LT+V 
Sbjct: 58  PRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKQEAIDWAWEYLTEVL 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +LP DRLY T F G    GL  D+EA  IW K LP  R+L     DNFWEMGD GPCGPC
Sbjct: 118 KLPTDRLYVTIFEGAPAEGLGRDDEAASIWGKHLPQERILNGNKHDNFWEMGDQGPCGPC 177

Query: 240 SEIHYDRTGNRD-----AASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     +       SLVN   P  IEIWN+VF+Q+NR++DGSL+PLP + +DTG+
Sbjct: 178 SEIHIDIRSEEERQRVSGLSLVNQGHPQVIEIWNLVFMQYNRKADGSLEPLPKRVIDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTD+F PI   I   TG      + GAD  +K D+A RV+ADHI
Sbjct: 238 GFERLCMALQGKTSNYDTDIFTPIIQTIATLTGI-----EYGAD--EKSDVAMRVIADHI 290

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++FAI DG  P N    YV+RRILRRAVRYG   L  ++ F   L+ ++++ MGD +P
Sbjct: 291 RTIAFAITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGRREAFMYALLPVLIETMGDAYP 350

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK---VLSGQDAFILWDTYGF 471
           EL+     I ++I  EE SF +TL  GI    K   + + K    L G DAF+L+DTYGF
Sbjct: 351 ELEAGRDLIAKVIREEEESFLRTLETGIRLLDKQIDEARAKGVTTLDGHDAFVLYDTYGF 410

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT L+  E G+ VD +GF++AM + +ER+R+A    AG    +   A  ++H  G  
Sbjct: 411 PLDLTALILSEHGMNVDEQGFDSAMQQQKERARNAAAIDAGDWQTV---ADGSVHFVGYD 467

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEG-F 590
           A + S + + +++ K      Y                +VL+ + FYAE GGQ+ D+G  
Sbjct: 468 AVECSTEILRYREVKQKNNTYYQ---------------VVLSQTPFYAEMGGQVGDKGCL 512

Query: 591 IEGLFGSFYVRNVQIYGGFVIHIGSL----TEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
           I+     + V + +      IH+        EG  R  V EE        RR  I  NH+
Sbjct: 513 IDATGRKYEVFDTKRENNLAIHLMKQLPEDLEGTLRAVVSEE--------RRHRIEANHS 564

Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD 706
            TH+L+ ALREVLG HV+QKGS V  E LRFDF+H   V+PE LRR+E +V+ +I+A+L 
Sbjct: 565 ATHLLHEALREVLGSHVEQKGSFVSDEVLRFDFAHFAKVEPEELRRVEQLVSARIRADLP 624

Query: 707 VFS-KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
           +   +E  + EA+ + G  A+FGE Y D VRV+  G                  S E CG
Sbjct: 625 LQEFREVPIDEAREM-GAMALFGEKYGDRVRVIRFGS-----------------STEFCG 666

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSL 825
           GTH+ +T     F ++SE  +A G+RRI A T        EAA +    ++D  +    L
Sbjct: 667 GTHICSTGRIGTFRIVSESSVAAGVRRIEAYTG-------EAAENYLYSIEDTLRSIKEL 719

Query: 826 LEKN-QVRKAQKKVAEEN 842
              + Q+  A KK  EEN
Sbjct: 720 FNNSPQLITAIKKTIEEN 737


>gi|254230499|ref|ZP_04923872.1| alanyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262393294|ref|YP_003285148.1| alanyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|451972074|ref|ZP_21925286.1| alanyl-tRNA synthetase [Vibrio alginolyticus E0666]
 gi|151936971|gb|EDN55856.1| alanyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262336888|gb|ACY50683.1| alanyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|451931912|gb|EMD79594.1| alanyl-tRNA synthetase [Vibrio alginolyticus E0666]
          Length = 860

 Score =  617 bits (1591), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 374/915 (40%), Positives = 519/915 (56%), Gaps = 88/915 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR+ F KFFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRNAFLKFFESKGHQIVESSSLVPHNDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT+V +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAISFAWEFLTEVLKL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           PADRL  T +          D+EA DIW K   +PA R++  G K        DNFW+MG
Sbjct: 122 PADRLLVTVY--------ETDDEAFDIWNKKVGVPADRIVRIGDKEGGKPYESDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
           DTGPCGPC+EI YD      G R        D    IEIWN VF+QFNR +DG+++PLP 
Sbjct: 174 DTGPCGPCTEIFYDHGEHIWGGRPGTP--EEDGDRFIEIWNNVFMQFNRHADGTMEPLPK 231

Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
             VDTG+G ER+++I+Q   SNY+ DVF  +  A  +  G    S           + + 
Sbjct: 232 PSVDTGMGIERISAIMQGVHSNYEIDVFQTLIKAAAEVIGYEDLS-----------NQSL 280

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RV+ADHIR+ SF I DG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF  LV ++ +
Sbjct: 281 RVIADHIRSCSFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGAFFYKLVGVLAE 339

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWD 467
           VMG    ELK+++A + +++  EE +FG+TL +G+    +A  ++ GKVL G+  F L+D
Sbjct: 340 VMGTAGEELKRQQAVVEKVLRIEEENFGRTLERGMVILNEALDNLDGKVLDGETVFKLYD 399

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
           TYGFP DLT  +A ER   +D EGF  AM+E R+R+R A      G    D +A      
Sbjct: 400 TYGFPADLTNDVAREREFAIDEEGFEKAMEEQRQRAREA------GQFGTDYNAA----- 448

Query: 528 RGVLATDDSFKFIWFQDHK--SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
              +  D   +F  +   K  S + A++     ++S+  G++  IVL  + FYAE GGQ 
Sbjct: 449 ---IKVDTQTEFCGYTGTKGSSSVAAMFVEGNEVDSLSAGDKAIIVLGETPFYAESGGQC 505

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D G I    G F V + Q  G  + H G + EG    + G+EV   VD +RR  I+ NH
Sbjct: 506 GDAGEIRTESGVFRVEDTQKLGNAIAHHGVMAEGV--LAKGDEVATIVDAERRAAISLNH 563

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+L+ ALR+VLG+HV QKGS+V  + LRFDFSH + V    L+ +E +VN QI+   
Sbjct: 564 SATHLLHAALRQVLGEHVTQKGSLVKADSLRFDFSHLEAVTAAELKEVERLVNAQIRRNH 623

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    +  AK   G  A+FGE Y D VRV+++G                  S ELCG
Sbjct: 624 TIETNVMDIESAKK-KGAMALFGEKYDDEVRVLSMG----------------DFSTELCG 666

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSL 825
           G H S+T +   F + SE GIA GIRRI AVT   A  A EA  +  +E    S  +   
Sbjct: 667 GIHASSTGDIGLFKITSESGIAAGIRRIEAVTGEAALDAIEAQNAKYEEKLAESAQKAKA 726

Query: 826 LEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKV 885
           LEK +V+K + K+A      A + A    +A   NG    ++ +E G D+  +R  V  +
Sbjct: 727 LEK-EVQKLKDKMA------AAESANIMGKAVEVNGTKVLVAALE-GADSKNLRTMVDDI 778

Query: 886 IEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGL 945
             Q G  V++ + + T +K  + AGV +  D + +++  + +    + + G+ G G+  +
Sbjct: 779 KNQMGSGVVLLA-NVTGDKVGLIAGVTK--DLTGKVKAGDLVKMVAEQVGGKGG-GRPDM 834

Query: 946 ASGQGTDAAQVTPAM 960
           A   GTD + +  A+
Sbjct: 835 AQAGGTDVSALPEAI 849


>gi|256419492|ref|YP_003120145.1| alanyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
 gi|256034400|gb|ACU57944.1| alanyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
          Length = 871

 Score =  617 bits (1591), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 381/909 (41%), Positives = 503/909 (55%), Gaps = 63/909 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R  F  FF  K H    S+P+V  NDPTLLF NAGMNQ+K  FLG   P  +    
Sbjct: 3   APEIRQQFLDFFASKGHHIMPSAPIVVKNDPTLLFTNAGMNQFKDYFLGNRAPAWK---- 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  +TQKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI+W+WELLT+VY
Sbjct: 59  -RVADTQKCLRVSGKHNDLEEVGIDTYHHTMFEMLGNWSFGDYFKKEAIDWSWELLTEVY 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +LP DRLY T F GD K  L  D EA + W K +P  R+L    KDNFWEMGDTGPCGPC
Sbjct: 118 KLPKDRLYVTVFEGDAKENLEKDQEAFEFWKKHVPEDRILMGNKKDNFWEMGDTGPCGPC 177

Query: 240 SEIHYDRTGNR-----DAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D   +      D  +LVN DDP  IEIWN VF+QFNR  D SL+ LPAKHVDTG+
Sbjct: 178 SEIHVDCRPDSERALVDGKTLVNADDPQVIEIWNNVFMQFNRLKDRSLESLPAKHVDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL  ++Q K SNYDTDVF       ++ TG      K G  D+ K D+A+RV+ADHI
Sbjct: 238 GFERLVRVIQGKTSNYDTDVFSGTIGHTEKLTGL-----KYGCTDS-KPDVAFRVIADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R +SFAIADG  P N G  YV+RRILRRAVRY    L  +      LV ++ +   +VFP
Sbjct: 292 RAISFAIADGQLPSNTGAGYVIRRILRRAVRYYFSFLNWKKPLLQDLVPVLAQQFANVFP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLD 474
           EL Q+   +++++  EE +F +TL  GI + +      + K + G+ AF L+DTYGFP D
Sbjct: 352 ELLQQVDFVQKVVFEEENNFLRTLDSGIRRIEDFMGAAKEKSVDGKTAFELYDTYGFPYD 411

Query: 475 LTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATD 534
           LT L+A E G   D EGF+ AM E ++RSR+A     G   V++ +A +      +  T+
Sbjct: 412 LTSLIASENGFSADKEGFDAAMKEQKDRSRAATELDMGDWTVLNENAESVFVGYELSETE 471

Query: 535 DSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGL 594
            S            IKA   G E         +  +VL+ + FYAE GGQ+ D G +   
Sbjct: 472 TSVA------KYRKIKA--KGKE---------QYQLVLSQTPFYAESGGQVGDTGILTFG 514

Query: 595 FGSFYVRNVQIYGGFVIH-IGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNF 653
             +  V + +     ++H +  L   A   +  + VI K   + R     NH+ TH+L+ 
Sbjct: 515 AETIQVTDTKKENNLIVHFVDKLP--ANITTTAKAVINK---NNRLSTTMNHSATHLLHA 569

Query: 654 ALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEAT 713
           ALR+VLG HV QKGS+V PE LRFDFSH   V  E L +IE IVNE+I+A + V  KE  
Sbjct: 570 ALRQVLGTHVAQKGSLVNPEYLRFDFSHFAKVSDEELAQIEEIVNEKIRANIPVVIKELP 629

Query: 714 LAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTR 773
             EA  + G  A+FGE Y D VRVV +         DP        S ELCGGTH+ +T 
Sbjct: 630 KEEALKL-GAMALFGEKYGDVVRVVVM---------DP------GYSVELCGGTHVGSTG 673

Query: 774 EAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEK----- 828
           E   F   SE  +A G+RRI AVT   A     A     K++  A K    ++       
Sbjct: 674 ELGIFKFTSEGAVAAGVRRIEAVTGRNALAFVNAQLQQLKDIKTALKNPKDIVAVVDNLI 733

Query: 829 NQVRKAQKKVAEENLQKAVKV-ATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIE 887
           N     +K+V    L+K  ++ A   AE    +G  F    V+V  +A A+++    +  
Sbjct: 734 NDKAALEKRVEALELEKVRQLSAGLQAEVENVHGINFLGKIVDVN-NAEALKQLCFTLKT 792

Query: 888 QKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLAS 947
           Q    V + + +    KA V   + +     K LE  + +   + P+    G G+   A+
Sbjct: 793 QIDNHVFILAAN-IGGKANVALMISDNLVAEKGLEAPKIIKEKIAPIIKGGGGGQKSFAT 851

Query: 948 GQGTDAAQV 956
             G +A Q+
Sbjct: 852 AGGQEAGQL 860


>gi|110637850|ref|YP_678057.1| alanyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
 gi|123058839|sp|Q11V49.1|SYA_CYTH3 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|110280531|gb|ABG58717.1| alanyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
          Length = 877

 Score =  617 bits (1590), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 364/869 (41%), Positives = 488/869 (56%), Gaps = 71/869 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R  F  FF  K H    S+P+V  NDPTL+F NAGMNQ+K  FLG   P     K 
Sbjct: 3   SAEIRQQFLDFFASKGHQIVPSAPIVNKNDPTLMFTNAGMNQFKDYFLGNETP-----KY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  +TQKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI W+WELLT VY
Sbjct: 58  RRIADTQKCLRVSGKHNDLEEVGIDTYHHTMFEMLGNWSFGDYFKEEAIAWSWELLTSVY 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +LP DRLY T F GD+K  LA D EA + W K++   R+L    KDNFWEMG+ GPCGPC
Sbjct: 118 KLPKDRLYVTIFEGDDKEKLARDTEAYNFWKKWIAEDRILLGNKKDNFWEMGEQGPCGPC 177

Query: 240 SEIHYD-RTGNR----DAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D RT       D  +LVNND P  +EIWN VFIQFNR++DGSL+ LP KHVDTG+
Sbjct: 178 SEIHVDLRTDEEVKAVDGKTLVNNDHPQVVEIWNNVFIQFNRKADGSLEELPDKHVDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   +Q K SNYDTDVF P+ D + +A G      K GAD  +K D+A RV+ADHI
Sbjct: 238 GFERLCMAIQKKKSNYDTDVFTPMIDFVAKAAGI-----KYGAD--EKTDIAMRVMADHI 290

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R +SF IADG  P N    YV+RRILRRAVRY    L  ++ F   LV ++   +  VFP
Sbjct: 291 RAISFVIADGQLPSNNKAGYVIRRILRRAVRYAYTFLNLKEPFLYKLVAVLADQLAHVFP 350

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK---VLSGQDAFILWDTYGF 471
           ELK ++  + +++  EE SF +TL  G+ K ++  ++++ K    + G+ AF L+DT+GF
Sbjct: 351 ELKSQQDFVAKVVQEEEISFLRTLDIGLSKLEQIREELKAKKATTIDGKTAFELYDTFGF 410

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDL QL+A E GL VD  GF+  M   ++RS+ A       A V  +D T       ++
Sbjct: 411 PLDLIQLIARENGLTVDEAGFDTEMAAQKQRSKKA-------ASVETSDWT-------IV 456

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPG-NEVGIVLASSSFYAEQGGQIFDEGF 590
             DD  +F+ +    S  + I    ++ +    G ++  +VL ++ FYAE GGQ  D G 
Sbjct: 457 TEDDEVEFVGYDHLISTSRII----KYRQVKTKGKDQYQLVLDTTPFYAESGGQAGDTGT 512

Query: 591 IEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHM 650
           +        V N       +IHI           +   V CKV+  +R L   NH+ TH+
Sbjct: 513 LVQGDKKIKVLNTVKENNLIIHITEQLPA----DLKAPVDCKVNVLQRSLTENNHSATHL 568

Query: 651 LNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSK 710
           L+ AL++VLG HV+QKGS+V    LRFDFSH   V  E L+++E IVNE+I+  + +  +
Sbjct: 569 LHAALKQVLGSHVNQKGSLVNESVLRFDFSHFSKVTEEELKKVELIVNEKIRENISLNER 628

Query: 711 E-ATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
               + EAK + G  A+FGE Y + VR++                   S S ELCGGTH+
Sbjct: 629 RNVPIEEAKKL-GAMALFGEKYGEYVRMITFDD---------------SFSRELCGGTHV 672

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLA-------YKAFEAACSLEKEVDDASKIE 822
           S+T +   F + SE  +A G+RRI A+T   A                L K   D  K  
Sbjct: 673 SSTGKIGFFKITSESSVAAGVRRIEALTATAAEVFVDEQQTTLAKITELMKNPKDLVKSL 732

Query: 823 GSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAV 882
             LLE+  V   QK++ E   +K+  +A    +     G    I    V     A+R+  
Sbjct: 733 EDLLEERIV--LQKQLDEYQAEKSKAIAKSLKDTVEKVGDINVIRAKLVLPSVDAMRQVA 790

Query: 883 --LKVIEQKGMPVMVFSTDETTNKAVVCA 909
             LK      + V+  + D   N AV+ +
Sbjct: 791 YDLKQTVDNLLLVLAVNVDGKPNIAVMIS 819


>gi|86142096|ref|ZP_01060620.1| alanyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
 gi|85831659|gb|EAQ50115.1| alanyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
          Length = 849

 Score =  616 bits (1589), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 344/818 (42%), Positives = 472/818 (57%), Gaps = 65/818 (7%)

Query: 81  SSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDD 140
           S+P+V  NDPTL+F NAGMNQ+K  FLG   P     K TR  +TQKC+R  GKHNDL++
Sbjct: 3   SAPMVIKNDPTLMFTNAGMNQFKEFFLGNGTP-----KDTRVTDTQKCLRVSGKHNDLEE 57

Query: 141 VGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLA 200
           VGKDTYHHT FEMLGNWSFGDYFK +AI+WAWELLT+VY++  ++LY T F GD+  GL 
Sbjct: 58  VGKDTYHHTMFEMLGNWSFGDYFKQDAIDWAWELLTEVYKIDKNKLYVTIFEGDDSEGLE 117

Query: 201 PDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRD-----AASL 255
            D EA D+W K +   R+L    KDNFWEMGD GPCGPCSEIH D     +      A L
Sbjct: 118 RDAEAYDMWKKHVAEDRILNGNKKDNFWEMGDQGPCGPCSEIHVDLRSEEEKAKTPGAEL 177

Query: 256 VNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVF 315
           VN D P  +EIWN+VFIQFNR++DGSL+ LPA+H+DTG+GFERL  +LQ+K SNYDTDVF
Sbjct: 178 VNADHPQVVEIWNLVFIQFNRKADGSLENLPARHIDTGMGFERLCMVLQDKTSNYDTDVF 237

Query: 316 MPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYV 375
            P+   I+  T A    G+     +++ D+A RV+ADH+R ++F+IADG  P N G  YV
Sbjct: 238 TPLIREIE--TIAHSKYGQ-----SEETDIAIRVIADHVRAVAFSIADGQLPSNTGAGYV 290

Query: 376 LRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFG 435
           +RRILRRAVRYG   L  ++ F   LV+++V  M   FPELK+++  I  +I  EE SF 
Sbjct: 291 IRRILRRAVRYGFTFLNTKEPFIYKLVSVLVDEMSKAFPELKKQQNLIFNVIKEEEQSFL 350

Query: 436 KTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNA 495
           +TL +G+        + +GK +SG  AF L+DTYGFP+DLT L+  E+G  +D + F   
Sbjct: 351 RTLDQGLVLLDSIIAETKGKEVSGAKAFELYDTYGFPIDLTALILSEKGYTLDEKAFQTE 410

Query: 496 MDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTG 555
           + + ++RSR+A   +AG   +++ D+                +F+ +   ++ ++   T 
Sbjct: 411 LQKQKDRSRAAGKIEAGDWTIVEEDSEE--------------EFVGYDTLQTPVRI--TR 454

Query: 556 SEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFGS-FYVRNVQIYGGFVIHIG 614
              I +   G++  +V   + FYAE GGQ+ D+G++E   G   Y+ + +     +IH+ 
Sbjct: 455 YRKINTKKEGDQYQLVFNLTPFYAEGGGQVGDKGYLEAANGDVVYITDTKKENNLIIHLS 514

Query: 615 SLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEK 674
                    ++ E     VD  +R     NH+ TH+L+ ALR VLG HV+QKGS+V    
Sbjct: 515 KNLPK----NLNETFTAVVDAKQRHRTQANHSATHLLHQALRAVLGTHVEQKGSMVHSGY 570

Query: 675 LRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDP 734
           LRFDFSH   V  E L+ IE  VN +I+ +L +  + A   +     G  A+FGE Y D 
Sbjct: 571 LRFDFSHFSKVTAEELKDIEQFVNARIQEQLPLEEQRAIPYDQAIAEGAIALFGEKYGDA 630

Query: 735 VRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRIT 794
           VR +  G+                 S ELCGGTH  NT +   F + SE  +A GIRRI 
Sbjct: 631 VRTIRFGK-----------------SMELCGGTHAENTADIWYFKIKSESAVASGIRRIE 673

Query: 795 AVTTGLAYKAF-------EAACSLEKEVDDASKIEGSLLEKNQVRKAQKKVAEENLQKAV 847
           A+T     + F       EA  SL     + +K   SL  +N   K Q +V      K V
Sbjct: 674 AITGDAVMQYFEEQDEQLEAVRSLLNNAKEPAKSIESLQSENNELKKQLEVLLAEKAKNV 733

Query: 848 KVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKV 885
           K   +T E    NG  F     EV LDA  +++   ++
Sbjct: 734 KGELKT-EIQEVNGVQFLAK--EVDLDANGIKDLAFQL 768


>gi|59798539|sp|Q6LMU3.2|SYA_PHOPR RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
          Length = 873

 Score =  616 bits (1589), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 375/932 (40%), Positives = 523/932 (56%), Gaps = 87/932 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EIRRAFLAFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDTFLGI-----EKRSYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI++AWE LT V  L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKQDAIKYAWEFLTDVLGL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFWEMGD 232
           P DRL  T +          D+EA DIW K +  PA R++  G         DNFW+MGD
Sbjct: 122 PQDRLLVTIY--------ETDDEAFDIWNKEMGIPADRIVRIGDNKGAPYASDNFWQMGD 173

Query: 233 TGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           TGPCGPCSEI YD      G R        D    IEIWN VF+QFNR++DG+++PLP  
Sbjct: 174 TGPCGPCSEIFYDHGEHIWGGRPGTP--EEDGDRFIEIWNNVFMQFNRQADGTMEPLPKP 231

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ +I+Q   SNY+ D+F  +     +  G    S           + + R
Sbjct: 232 SVDTGMGIERIAAIMQGVHSNYEIDIFQTLIKKSAEVIGYEDLS-----------NQSLR 280

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           VVADHIR+ +F I DG  P NEGR YVLRRI+RRAVR+G++ L A   FF  LV  + ++
Sbjct: 281 VVADHIRSCAFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGASGAFFYKLVGPLAEI 339

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    ELK+R+A + +I+  EE +FG+TL +G+     A  ++ GK L G+  F L+DT
Sbjct: 340 MGTAGDELKKRQALVEKILKIEEDNFGRTLDRGLTILNDALDNLSGKELDGETVFKLYDT 399

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP DLT  +A ER   +D EGFNNAM+  R+R+R A      G   +D + +      
Sbjct: 400 YGFPADLTNDVARERDFTIDEEGFNNAMEAQRQRAREA------GKFGVDYNES------ 447

Query: 529 GVLATDDSFKFIWFQDH--KSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
             +  D + +F  +     +S I A+Y   E ++S++ G +  I+L ++ FYAE GGQ  
Sbjct: 448 --IKVDVNTEFCGYTGTAAQSSIVALYRDGEAVDSILAGEDALIILDNTPFYAESGGQCG 505

Query: 587 DEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
           D G +      F V + Q +G  + H GSL +GA   +VG+++  +VD  RR  I  NH+
Sbjct: 506 DAGVLTAENTVFNVSDTQKFGAAIGHQGSLVQGA--LNVGDKLEAQVDVVRRTAITLNHS 563

Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD 706
            TH+L+ ALR +LG+HV QKGS+V P+ LRFDFS+ + V PE LR IE +VNEQI+    
Sbjct: 564 ATHLLHSALRNLLGEHVAQKGSLVKPDALRFDFSNLEAVKPEQLREIERVVNEQIRLNHS 623

Query: 707 VFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGG 766
           + +    +  AK   G  A+FGE Y D VRV+++G                  S ELCGG
Sbjct: 624 IDTNIMDIESAKQ-KGAMALFGEKYDDEVRVLSMGE----------------FSTELCGG 666

Query: 767 THLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIE-GSL 825
            H  NT +   F + SE GIA GIRRI AVT   A  A  A  +L  E     K +  S+
Sbjct: 667 IHAKNTGDIGLFKITSEGGIAAGIRRIEAVTGAAAIDALHAQEALLSETASIVKSDAASV 726

Query: 826 LEKNQVRKAQKKVAEENLQKAVK--VATETA----EAAASNGKPFCISRVEVGLDAAAVR 879
             K     A  K  E+++Q+      A E+A    +A   NG    I++++ G D  A+R
Sbjct: 727 ATKVSALLAHSKQLEKDIQQLQDKLAAQESAGLLDQAKEINGVKVLITQLD-GADNKALR 785

Query: 880 EAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCG 939
             + ++  + G  ++V   + + +K  +  GV +  D + +++  E +    Q + G+ G
Sbjct: 786 GMLDEIKNKLGSGIVVLG-NVSGDKVGLIVGVTK--DLTGKVKAGELVNMVAQQVGGKGG 842

Query: 940 KGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
            G+  +A   GTDAA +  A++    +   KL
Sbjct: 843 -GRPDMAQAGGTDAAALPAALESVTPWLTEKL 873


>gi|357497977|ref|XP_003619277.1| Alanyl-tRNA synthetase, partial [Medicago truncatula]
 gi|355494292|gb|AES75495.1| Alanyl-tRNA synthetase, partial [Medicago truncatula]
          Length = 452

 Score =  616 bits (1589), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 311/457 (68%), Positives = 369/457 (80%), Gaps = 30/457 (6%)

Query: 496 MDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTG 555
           M+ ARERSR+AQNKQAGGAIVMDADAT+AL KR ++ TDDSFKF  F+DH++V+KAIYTG
Sbjct: 1   MEAARERSRTAQNKQAGGAIVMDADATSALQKRSIVPTDDSFKFASFRDHETVVKAIYTG 60

Query: 556 SEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGS 615
           SEF++SV    +VG++L S+SFYAEQGGQIFD G ++    SF V NVQ+YGGFV+HIG+
Sbjct: 61  SEFVDSVNTDGDVGVILESTSFYAEQGGQIFDTGSLDFHHASFQVHNVQVYGGFVLHIGN 120

Query: 616 LTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKL 675
              G G  SVG++V+CKVDY RR LIAPNHTCTHMLNFALREVLG+HVDQKGS+VLPEKL
Sbjct: 121 ---GTG-ISVGDKVVCKVDYGRRALIAPNHTCTHMLNFALREVLGNHVDQKGSIVLPEKL 176

Query: 676 RFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPV 735
           RFDFSHGKPVD + LRRIESIVNEQI+AELDV +KE TLA+AK I GLRAVFGEVYPDPV
Sbjct: 177 RFDFSHGKPVDADSLRRIESIVNEQIQAELDVNAKEVTLADAKRIKGLRAVFGEVYPDPV 236

Query: 736 RVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITA 795
           RVV++G+KVEDLLADP+N++WLSIS+ELCGGTH+SNTREA+AFALL+EEGIAKGIRRITA
Sbjct: 237 RVVSVGQKVEDLLADPDNEKWLSISSELCGGTHISNTREAKAFALLAEEGIAKGIRRITA 296

Query: 796 VTTGLAYKAFEAACSLEKEVDDASKIEGSLLE-----------------------KNQVR 832
           VTT  A  A + A + EK+VD+ +K+EGSLLE                       K ++ 
Sbjct: 297 VTTDRASDAMKMADNFEKQVDEVAKLEGSLLEEKVSSLKSNVETLSIPAAKKAEIKTKIA 356

Query: 833 KAQKK--VAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKG 890
             Q+K  + EEN +KAV +  E A+ A S+GK FCIS V VGLD AAVREAV KVI+QKG
Sbjct: 357 LLQRKSVLLEENKRKAVTITAEKADLAVSDGKSFCISHVNVGLDVAAVREAVTKVIDQKG 416

Query: 891 MPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWL 927
           + VMVFSTDE+TNKAVVCAGVPEK D+ K L+VSEWL
Sbjct: 417 LSVMVFSTDESTNKAVVCAGVPEKGDKGK-LDVSEWL 452


>gi|432958468|ref|XP_004086045.1| PREDICTED: alanine--tRNA ligase, mitochondrial-like [Oryzias
           latipes]
          Length = 673

 Score =  616 bits (1589), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 319/681 (46%), Positives = 427/681 (62%), Gaps = 23/681 (3%)

Query: 100 NQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSF 159
           +++KP+FLGT DP +Q++   R  N+QKC+RAGGKHNDL+DVG+D YHHTFFEMLGNWSF
Sbjct: 3   DEFKPVFLGTVDPRSQMASYRRVVNSQKCVRAGGKHNDLEDVGRDIYHHTFFEMLGNWSF 62

Query: 160 GDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRV 218
           GDYFK EA + AW LLT+ Y +PADRLY +YFGGD  +GL PD E R+IWL   +   R+
Sbjct: 63  GDYFKVEACQMAWSLLTEHYGIPADRLYVSYFGGDAASGLPPDEETRNIWLDLGVSPGRI 122

Query: 219 LPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRES 278
           LPFG +DNFWEMGD+GPCGPC+EIH+D  G RDAA LVN   P  +EIWN+VFIQ+NRE 
Sbjct: 123 LPFGLEDNFWEMGDSGPCGPCTEIHFDHMGVRDAAFLVNAGSPDVVEIWNLVFIQYNREP 182

Query: 279 DGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGAD 338
           D SL+ LP   VDTG+G ERL S+LQ K SNYDTD+F P+ DAI Q +G  PY+G+ G +
Sbjct: 183 DRSLRLLPRFSVDTGMGLERLVSVLQGKRSNYDTDLFTPLMDAIHQRSGVGPYTGRTGTE 242

Query: 339 DADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFF 398
           +  +VD+AYRVVADHIRTLS  IADG  PG  G E VLRRILRRAVR+  +VL+A  G  
Sbjct: 243 EGSQVDLAYRVVADHIRTLSICIADGIHPGMSGAELVLRRILRRAVRFCIQVLQAPQGAL 302

Query: 399 NGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKK--AAQDVQGKV 456
             LV  + +++GD +PELKQ E  I +II   EA F  +L +G    ++  + +  +   
Sbjct: 303 ASLVPTITQLLGDAYPELKQEEDRIVDIINENEAQFLASLQQGSRIIQRTLSKKGCKHSS 362

Query: 457 LSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAG--GA 514
                A+ L    GFPLDL  +M EERG+ V+ +  +  +    E  + A  K+AG    
Sbjct: 363 FPASLAWTLHRDLGFPLDLVDMMLEERGVQVNRQDLDRLL---LENQKVASEKRAGLWSH 419

Query: 515 IVMDADATAALHKRGVLATDDSFKFIWFQDH-----KSVIKAIYTGSEFIESVVPGNEVG 569
           +++D    A L +  V  TDDS K+ +  +       + + A+  G   ++ V  G    
Sbjct: 420 VMLDLHILAELQRLKVPHTDDSLKYQYGLEKDRYACSATVLALCNGQTLVQEVSEGQRCA 479

Query: 570 IVLASSSFYAEQGGQIFDEGFIEGLFGS---FYVRNVQIYGGFVIHIGSLTEGAGRFSVG 626
           ++L  + FY+EQGGQ  D G++         F V  +   GG+V+H  + T+   R   G
Sbjct: 480 VILDRTCFYSEQGGQSHDRGYLTCSRLQDVVFPVDGLLQVGGYVVHQVTATD---RLKTG 536

Query: 627 EEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVD 686
           ++V   +D   R      HT TH+LNFALR+VLG  V Q+GS V  ++LRFDFS    + 
Sbjct: 537 DQVQLHLDQAHRLSCMVKHTATHILNFALRKVLGPSVHQRGSHVSADRLRFDFSVKGSLS 596

Query: 687 PEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVED 746
              L+++E  V++ + A   V + E  +  AK I GLR V  EVYPDPVRVV++   V +
Sbjct: 597 IPQLQQVERCVHDIVTANQMVHTMELPMQRAKSIRGLRTV-DEVYPDPVRVVSLHVPVSE 655

Query: 747 LLADPENKEWLSISAELCGGT 767
           LL  P +K+    S ELC GT
Sbjct: 656 LLDSPPDKD---TSVELCCGT 673


>gi|54310165|ref|YP_131185.1| alanyl-tRNA synthetase [Photobacterium profundum SS9]
 gi|46914606|emb|CAG21383.1| putative alanyl-tRNA synthetase [Photobacterium profundum SS9]
          Length = 906

 Score =  616 bits (1589), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 383/976 (39%), Positives = 538/976 (55%), Gaps = 99/976 (10%)

Query: 18  RVLLNPSLTLAVTNHHHSLISRFSASAVAAMPGADPQVVEWPATKVRDTFFKFFEDKNHV 77
           +  L+P L+L   N      S F  +++   P      +     ++R  F  FFE K H 
Sbjct: 8   KFYLSPILSLKGDN------SGFYKASIQDFP------MYMSTDEIRRAFLAFFESKGHQ 55

Query: 78  NWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHND 137
             +SS +VP NDPTLLF NAGMNQ+K  FLG      +    TRA   Q+C+RAGGKHND
Sbjct: 56  IVESSSLVPANDPTLLFTNAGMNQFKDTFLGI-----EKRSYTRATTAQRCVRAGGKHND 110

Query: 138 LDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKA 197
           L++VG    HHTFFEMLGN+SFGDYFK +AI++AWE LT V  LP DRL  T +      
Sbjct: 111 LENVGFTARHHTFFEMLGNFSFGDYFKQDAIKYAWEFLTDVLGLPQDRLLVTIY------ 164

Query: 198 GLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFWEMGDTGPCGPCSEIHYDRT- 247
               D+EA DIW K +  PA R++  G         DNFW+MGDTGPCGPCSEI YD   
Sbjct: 165 --ETDDEAFDIWNKEMGIPADRIVRIGDNKGAPYASDNFWQMGDTGPCGPCSEIFYDHGE 222

Query: 248 ---GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQ 304
              G R        D    IEIWN VF+QFNR++DG+++PLP   VDTG+G ER+ +I+Q
Sbjct: 223 HIWGGRPGTP--EEDGDRFIEIWNNVFMQFNRQADGTMEPLPKPSVDTGMGIERIAAIMQ 280

Query: 305 NKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADG 364
              SNY+ D+F  +     +  G    S           + + RVVADHIR+ +F I DG
Sbjct: 281 GVHSNYEIDIFQTLIKKSAEVIGYEDLS-----------NQSLRVVADHIRSCAFLIVDG 329

Query: 365 SCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHIR 424
             P NEGR YVLRRI+RRAVR+G++ L A   FF  LV  + ++MG    ELK+R+A + 
Sbjct: 330 VMPSNEGRGYVLRRIIRRAVRHGNK-LGASGAFFYKLVGPLAEIMGTAGDELKKRQALVE 388

Query: 425 EIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQLMAEERG 484
           +I+  EE +FG+TL +G+     A  ++ GK L G+  F L+DTYGFP DLT  +A ER 
Sbjct: 389 KILKIEEDNFGRTLDRGLTILNDALDNLSGKELDGETVFKLYDTYGFPADLTNDVARERD 448

Query: 485 LLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQD 544
             +D EGFNNAM+  R+R+R A      G   +D + +        +  D + +F  +  
Sbjct: 449 FTIDEEGFNNAMEAQRQRAREA------GKFGVDYNES--------IKVDVNTEFCGYTG 494

Query: 545 H--KSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRN 602
              +S I A+Y   E ++S++ G +  I+L ++ FYAE GGQ  D G +      F V +
Sbjct: 495 TAAQSSIVALYRDGEAVDSILAGEDALIILDNTPFYAESGGQCGDAGVLTAENTVFNVSD 554

Query: 603 VQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDH 662
            Q +G  + H GSL +GA   +VG+++  +VD  RR  I  NH+ TH+L+ ALR +LG+H
Sbjct: 555 TQKFGAAIGHQGSLVQGA--LNVGDKLEAQVDVVRRTAITLNHSATHLLHSALRNLLGEH 612

Query: 663 VDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCING 722
           V QKGS+V P+ LRFDFS+ + V PE LR IE +VNEQI+    + +    +  AK   G
Sbjct: 613 VAQKGSLVKPDALRFDFSNLEAVKPEQLREIERVVNEQIRLNHSIDTNIMDIESAKQ-KG 671

Query: 723 LRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLS 782
             A+FGE Y D VRV+++G                  S ELCGG H  NT +   F + S
Sbjct: 672 AMALFGEKYDDEVRVLSMGE----------------FSTELCGGIHAKNTGDIGLFKITS 715

Query: 783 EEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIE-GSLLEKNQVRKAQKKVAEE 841
           E GIA GIRRI AVT   A  A  A  +L  E     K +  S+  K     A  K  E+
Sbjct: 716 EGGIAAGIRRIEAVTGAAAIDALHAQEALLSETASIVKSDAASVATKVSALLAHSKQLEK 775

Query: 842 NLQKAVK--VATETA----EAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMV 895
           ++Q+      A E+A    +A   NG    I++++ G D  A+R  + ++  + G  ++V
Sbjct: 776 DIQQLQDKLAAQESAGLLDQAKEINGVKVLITQLD-GADNKALRGMLDEIKNKLGSGIVV 834

Query: 896 FSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQ 955
              + + +K  +  GV +  D + +++  E +    Q + G+ G G+  +A   GTDAA 
Sbjct: 835 LG-NVSGDKVGLIVGVTK--DLTGKVKAGELVNMVAQQVGGKGG-GRPDMAQAGGTDAAA 890

Query: 956 VTPAMDLAAEFAAMKL 971
           +  A++    +   KL
Sbjct: 891 LPAALESVTPWLTEKL 906


>gi|441504451|ref|ZP_20986445.1| Alanyl-tRNA synthetase [Photobacterium sp. AK15]
 gi|441427918|gb|ELR65386.1| Alanyl-tRNA synthetase [Photobacterium sp. AK15]
          Length = 874

 Score =  616 bits (1588), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 374/931 (40%), Positives = 529/931 (56%), Gaps = 84/931 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  +  FFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EIRRAYLAFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDTFLGL-----EKRSYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI +AWE LT V +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKHDAINYAWEFLTDVLKL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           P DRL  T +          D+EA DIW K   +PA R++  G K        DNFW+MG
Sbjct: 122 PQDRLLVTVY--------ETDDEAFDIWNKEVGIPADRIVRIGDKKGGKPYESDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
           DTGPCGPC+EI +D      G R        D    IEIWN VF+QFNR++DG+++PLP 
Sbjct: 174 DTGPCGPCTEIFFDHGEHIWGGRPGTP--EEDGDRFIEIWNNVFMQFNRQADGTMEPLPK 231

Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
             VDTG+G ER+ +I+Q   SNY+ D+F  +   I++A         +G DD    + + 
Sbjct: 232 PSVDTGMGIERIAAIMQGVHSNYEIDIFQTL---IKEAAAV------IGYDDLS--NQSL 280

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RVVADHIR+ ++ I DG  P NEGR YVLRRI+RRAVR+G++ L A+  FF  LV  + +
Sbjct: 281 RVVADHIRSCAYLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAKGAFFYKLVGPLAE 339

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWD 467
           +MG    ELK+++  + +++  EE +FG+TL +G+    +A  ++ GKVL G+  F L+D
Sbjct: 340 IMGTAGVELKKQQEMVEKVLKIEEDNFGRTLDRGMTILNEALDNLDGKVLDGETVFKLYD 399

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
           TYGFP DLT  +A ERG  +D EGFN+AM+  R+R+R A      G   +D +    +  
Sbjct: 400 TYGFPADLTNDVARERGFSIDEEGFNDAMEAQRQRAREA------GQFGVDYNEAIKVE- 452

Query: 528 RGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFD 587
                 D  F      + +  + A++   E ++S+  G E  +VL ++ FYAE GGQ  D
Sbjct: 453 -----ADTDFCGYSATEGEGDVVALFRDGEAVDSINAGEEALVVLNNTPFYAESGGQCGD 507

Query: 588 EGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTC 647
            G +      F V + Q +G  + H GSL EG     VG+++   VD +RR  ++ NH+ 
Sbjct: 508 TGVMTAAGVKFDVADTQKFGAAIGHKGSLVEGT--LKVGDKLTATVDAERRASVSLNHSA 565

Query: 648 THMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDV 707
           TH+L+ ALR +LG+HV QKGS+V P+ LRFDFSH + V PE +R +E +VN+QI+    +
Sbjct: 566 THLLHAALRNLLGEHVAQKGSLVKPDSLRFDFSHLEAVKPEEIREVERVVNDQIRLNHSI 625

Query: 708 FSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGT 767
            +    +  AK   G  A+FGE Y D VRV+++G                  S ELCGG 
Sbjct: 626 ETNIMDIESAKA-KGAMALFGEKYDDEVRVLSMGE----------------FSTELCGGI 668

Query: 768 HLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIE-GSLL 826
           H  NT +   F ++SE GIA GIRRI AVT   A +A  A  +L  E     K +  S+ 
Sbjct: 669 HAKNTGDIGLFKIVSEGGIAAGIRRIEAVTGSAAIEALHAQEALLAETASLVKSDAASVA 728

Query: 827 EKNQVRKAQKKVAEENLQ--KAVKVATETA----EAAASNGKPFCISRVEVGLDAAAVRE 880
            K     A  K  E+ +Q  K    A E+A    +A   NG    IS+++ G D  A+R 
Sbjct: 729 TKVSALVAHSKQLEKEIQQLKDKLAAQESAGLINQAQEINGVKVLISKLD-GADNKALRG 787

Query: 881 AVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGK 940
            V ++  Q G  ++V   + + +K  + AGV +  D   +++  E +    Q + G+ G 
Sbjct: 788 MVDELKNQLGSGIVVLG-NVSGDKVGLIAGVTK--DLIGKVKAGELVNMVAQQVGGKGG- 843

Query: 941 GKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           G+  +A   GTDAA +  A++    + A KL
Sbjct: 844 GRPDMAQAGGTDAAALPAALESVTPWLADKL 874


>gi|420150220|ref|ZP_14657380.1| alanine--tRNA ligase [Capnocytophaga sp. oral taxon 335 str. F0486]
 gi|394752279|gb|EJF35981.1| alanine--tRNA ligase [Capnocytophaga sp. oral taxon 335 str. F0486]
          Length = 877

 Score =  616 bits (1588), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 355/884 (40%), Positives = 506/884 (57%), Gaps = 74/884 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F KFFE K H    S+P+V  NDPTL+F NAGMNQ+K  FLG A P     K 
Sbjct: 3   SQEIREQFLKFFESKGHTIVPSAPMVVKNDPTLMFTNAGMNQFKEFFLGNAKP-----KY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  +TQKC+R  GKHNDL++VG+DTYHHT FEMLGNWSFGDYFK EAI WAWELLT++Y
Sbjct: 58  KRVADTQKCLRVSGKHNDLEEVGRDTYHHTMFEMLGNWSFGDYFKKEAISWAWELLTEIY 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           ++P + LY T F G E+ G+  D EA DIW + +  + +L    KDNFWEMGD GPCGPC
Sbjct: 118 KIPKENLYVTVFEGSEEDGVPFDQEAYDIWKERIAENHILLGNKKDNFWEMGDQGPCGPC 177

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           +EIH D     + A      LVNND P  IEIWN VF++FNR++DGSL+ LP+++VDTG+
Sbjct: 178 TEIHVDIRSEEEKAKVPGRDLVNNDHPQVIEIWNNVFMEFNRKADGSLEKLPSRNVDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL  +LQ K SNYDTDVF P+   +++ T +R  SG     + ++V++A RV++DHI
Sbjct: 238 GFERLCMVLQKKQSNYDTDVFTPLIHKVEEITQSRYTSGDRVTAEQEQVNIAIRVISDHI 297

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R ++FAI DG  P N G  YV+RRILRRA+RYG   L  ++ F   LV  +   MG  FP
Sbjct: 298 RAVAFAITDGQLPSNNGAGYVIRRILRRAIRYGFTFLNQKEPFIYKLVETLSNQMGGTFP 357

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLD 474
           EL++++  I  +I  EEASF +TL +G+       Q+  GK LSG  AF L+DTYGFP D
Sbjct: 358 ELEKQQFLIMSVIKEEEASFLRTLEQGLLMLDVMIQNSPGKQLSGGKAFELYDTYGFPKD 417

Query: 475 LTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATD 534
           LT L+  E+GL +D   F   + + +ERSR+A   +A   +              +L  D
Sbjct: 418 LTALILSEKGLTMDEASFEEQLQKQKERSRAAAQIKADDWV--------------ILRDD 463

Query: 535 DSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGL 594
           D  +FI +   ++V++ +      +ES   G    +V  ++ FY E GGQ+ D+G ++  
Sbjct: 464 DEEEFIGYDTLEAVVRLVKYRR--VESQKDGTHFQLVFNTTPFYPEGGGQVGDKGTLQSA 521

Query: 595 FGSF-YVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNF 653
            G   Y+ + +     +IHI          ++ +    +V    R++   NH+ TH+L+ 
Sbjct: 522 NGELIYILDTKKENNLIIHISEHLPT----NLNDPFKAEVHSISREMAEANHSATHLLHQ 577

Query: 654 ALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEAT 713
           ALREVLG HV+QKGS V PE LRFDFSH   +  E L+++E +VN++I  ++ +      
Sbjct: 578 ALREVLGTHVEQKGSRVAPETLRFDFSHFAKLTEEELKKVEQLVNKRIFEKIPLQEHRNI 637

Query: 714 LAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTR 773
             +    +G  A+FGE Y D VR++  G                  S ELCGGTH+ NT 
Sbjct: 638 PMQQAVESGAMALFGEKYGDRVRMIQFGD-----------------SKELCGGTHVKNTG 680

Query: 774 EAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV-------DDASKIEGSLL 826
           +   F ++SE  +A GIRRI A+T G A K F     L +++        D  K    L 
Sbjct: 681 DIWYFKIISEGAVAAGIRRIEAITRGGAMKYFTEQEQLVEQIKETLKNAQDPVKAIRHLQ 740

Query: 827 EKN--------QVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAV 878
           E+N        Q+RK Q K     L+ ++K     AE    NG    + RV+   + A +
Sbjct: 741 EENAALHKELEQLRKEQAK----QLKTSIK-----AEFTEVNGVQCLVKRVDA--EVATL 789

Query: 879 REAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLE 922
           ++   ++  +     + F +     KA++   + ++  Q+K L+
Sbjct: 790 KDLAFELGNEVKNAFVFFGSAHEEGKALLLCYINKELAQAKGLD 833


>gi|196231110|ref|ZP_03129970.1| alanyl-tRNA synthetase [Chthoniobacter flavus Ellin428]
 gi|196224940|gb|EDY19450.1| alanyl-tRNA synthetase [Chthoniobacter flavus Ellin428]
          Length = 925

 Score =  615 bits (1587), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 374/868 (43%), Positives = 487/868 (56%), Gaps = 97/868 (11%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLG----------- 108
           + ++R +F  FF +K H    SS ++P + P LLF NAGMNQ+ PIFLG           
Sbjct: 3   SAQIRQSFLDFFREKQHTIVPSSSLMP-DSPNLLFTNAGMNQFVPIFLGERKADVSSWAD 61

Query: 109 --------TADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFG 160
                     D     +  TRA +TQKCIRAGGKHNDLDDVG DTYHHTFFEMLGNWSFG
Sbjct: 62  AVNWFGEKNRDGTLNKTSDTRAADTQKCIRAGGKHNDLDDVGLDTYHHTFFEMLGNWSFG 121

Query: 161 DYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDN--EARDIWL-KFL---- 213
           DYFK EAIEWAWEL+   ++ P  RLYAT +  D+  G   D   EA ++W  KF     
Sbjct: 122 DYFKKEAIEWAWELVVGRWKFPPQRLYATIYNPDKSIGDPADRDEEAWNLWAEKFRAVGL 181

Query: 214 -PASRVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDA-ASLVNNDDPTCIEIWNIVF 271
            PA  ++    KDNFW MG+TGPCGPCSE+H D T   D   +LVN     CIEIWN+VF
Sbjct: 182 DPAVHIVNGNKKDNFWMMGETGPCGPCSELHVDLTPAGDTKGALVNKGTAECIEIWNLVF 241

Query: 272 IQFNRESDGSLKPLPAKHVDTGLGFERLTSILQN----------KMSNYDTDVFMPIFDA 321
           IQFN   DG+  PLPAKHVDTG+GFER++SI+Q           K+SNY+TD+F PIFD 
Sbjct: 242 IQFNANPDGTFSPLPAKHVDTGMGFERVSSIIQGTKDFTDFANAKISNYETDIFRPIFDE 301

Query: 322 IQQATGARPYSGKVGADDA----------DKVDMAYRVVADHIRTLSFAIADGSCPGNEG 371
           I++  G R Y+  +   +A          +KVD+A+RV+ADHIRTLSFAIADG  PGN  
Sbjct: 302 IEKQCGKR-YTSTLPQPNAQGQIIPESEQEKVDVAFRVIADHIRTLSFAIADGIQPGNTD 360

Query: 372 REYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEE 431
           R YVLRRILRRAVRYG   L   + FF  LV ++ + MGDVFPE++ ++ H+ E++  EE
Sbjct: 361 RNYVLRRILRRAVRYG-RTLGFTEPFFYKLVGVLARTMGDVFPEIRAKQKHVEEVLKREE 419

Query: 432 ASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEG 491
            SF +TL KGIE F       + + LSG  AF L+DTYGFPLDLT+LMA ERGL VDI G
Sbjct: 420 ESFNRTLDKGIELFTSFVASEKQQQLSGTSAFKLYDTYGFPLDLTELMARERGLTVDIAG 479

Query: 492 FNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQDHKSVIKA 551
           F   M++ R+R+R AQ        V D    + +       T     FI + DH      
Sbjct: 480 FEVEMEKQRKRAREAQ--------VRDVIELSEIE------TKTPTHFIGY-DHN----- 519

Query: 552 IYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFG-SFYVRNVQIYGGFV 610
            +TG++  E +    +  ++  +S  YAE GGQ+ D G + G  G S+ + N Q  G   
Sbjct: 520 -HTGADVQEVLSVKGKTVVIANNSVCYAEMGGQVGDSGEMTGHGGNSWRIANTQKSGNTW 578

Query: 611 IHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVV 670
           +H     +G    +VG+ V  ++D  RR  I  +HT TH+L++AL EV+     QKGS V
Sbjct: 579 LHFLEEADGP---AVGDHVTIQLDGARRGAIQRHHTVTHLLHWALHEVVSKEATQKGSFV 635

Query: 671 LPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEV 730
            P+KL FDF+    + P  +R IE +VNE+I     V   E   AE +    +   FG+ 
Sbjct: 636 GPDKLTFDFNSAA-LTPVQVRDIERLVNERIVENGSVSWIEMPYAEVRGRGDIMQFFGDK 694

Query: 731 YPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGI 790
           Y + VRVV IG +   L            S ELC GTH   T E   F + +E  IA G+
Sbjct: 695 YGETVRVVQIGGQATKLDG---------YSMELCAGTHTRATGEIGLFRINAESAIAAGV 745

Query: 791 RRITAVTTGLAYKAFEAAC----SLEKEVDDA-----SKIEGSLLEKNQVRKAQKKVAEE 841
           RRI A     AY    A      +L  +V         +IEG L ++ ++ KA K  A +
Sbjct: 746 RRIEAAAGLNAYDLANADTQRLHALATKVGSPLPELEKRIEGLLAQQKELEKALK--AAQ 803

Query: 842 NLQKAVKVATETAEAAASNGKPFCISRV 869
             + A +     A AA  NG P  I+ +
Sbjct: 804 QREAAGRAKDLLANAATINGTPAIIANL 831


>gi|424042522|ref|ZP_17780225.1| alanine--tRNA ligase [Vibrio cholerae HENC-02]
 gi|408889489|gb|EKM27905.1| alanine--tRNA ligase [Vibrio cholerae HENC-02]
          Length = 858

 Score =  615 bits (1587), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 374/915 (40%), Positives = 515/915 (56%), Gaps = 88/915 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR+ F KFFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 5   EVRNAFLKFFESKGHQIVESSSLVPHNDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 59

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT+  +L
Sbjct: 60  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAISFAWEFLTETLKL 119

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           PADRL  T +          D+EA DIW K   +PA R++  G K        DNFW+MG
Sbjct: 120 PADRLLVTVY--------ETDDEAFDIWNKKVGVPADRIIRIGDKKGGKPYESDNFWQMG 171

Query: 232 DTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
           DTGPCGPC+EI YD      G R        D    IEIWN VF+QFNR +DG+++PLP 
Sbjct: 172 DTGPCGPCTEIFYDHGEHIWGGRPGTP--EEDGDRFIEIWNNVFMQFNRHADGTMEPLPK 229

Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
             VDTG+G ER+++I+Q   SNY+ DVF  +  A  +  G    S           + + 
Sbjct: 230 PSVDTGMGIERISAIMQGVHSNYEIDVFQALIKAAAEVIGYEDLS-----------NQSL 278

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RV+ADHIR+ SF I DG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF+ LV ++ +
Sbjct: 279 RVIADHIRSCSFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGAFFHKLVGVLAE 337

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWD 467
           +MG    ELK+++A + +++  EE +FG+TL +G+    +A  ++ GKVL G+  F L+D
Sbjct: 338 IMGTAGEELKRQQAVVEKVLRIEEENFGRTLERGMAILNEALDNLDGKVLDGETVFKLYD 397

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
           TYGFP DLT  +A ER   +D EGF  AM+E R+R+R A N           D  AA+  
Sbjct: 398 TYGFPADLTNDVAREREFAIDEEGFEKAMEEQRQRAREAGN--------FGTDYNAAIK- 448

Query: 528 RGVLATDDSFKFIWFQDHK--SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
                 D   +F  +   K  S + A++     +ES+  G++  IVL  + FYAE GGQ 
Sbjct: 449 -----VDTQTEFCGYAGTKGSSSVAAMFVEGNEVESLSAGDKAIIVLGETPFYAESGGQC 503

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D G I    G F V + Q  G  + H G + EG    + G+EV   VD +RR  I+ NH
Sbjct: 504 GDAGEIRTESGVFRVEDTQKLGNAIAHHGVMAEGV--LAKGDEVATIVDAERRAAISLNH 561

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+L+ ALR+VLG+HV QKGS+V  + LRFDFSH + V    L+ +E +VN QI+   
Sbjct: 562 SATHLLHAALRQVLGEHVTQKGSLVKADSLRFDFSHLEAVTAAELKEVERLVNAQIRRNH 621

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    +  AK   G  A+FGE Y D VRV+++G                  S ELCG
Sbjct: 622 TIETNVMDIESAKK-KGAMALFGEKYDDEVRVLSMG----------------DFSTELCG 664

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSL 825
           G H SNT +   F + SE GIA GIRRI AVT   A  A EA  +  +E    S  +   
Sbjct: 665 GIHASNTGDIGLFKITSEGGIAAGIRRIEAVTGEGALDAIEAQAAKYEEKLAESAQKAKS 724

Query: 826 LEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKV 885
           LEK +++K + K+A      A + A    +    NG    I+ +E G D   +R  V  +
Sbjct: 725 LEK-EIQKLKDKMA------AAESANIMGKVQDINGTKVLIAALE-GADNKNLRTMVDDI 776

Query: 886 IEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGL 945
             Q G  V++ + +   +K  + AGV +  D   +++  + +    + + G+ G G+  +
Sbjct: 777 KNQVGSGVILLA-NVNDDKIGLIAGVTK--DLIGKVKAGDLVKMVAEQVGGKGG-GRPDM 832

Query: 946 ASGQGTDAAQVTPAM 960
           A   GTD A +  A+
Sbjct: 833 AQAGGTDVAALPAAI 847


>gi|376317143|emb|CCG00515.1| Alanyl-tRNA synthetase [uncultured Flavobacteriia bacterium]
          Length = 870

 Score =  615 bits (1586), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 358/840 (42%), Positives = 489/840 (58%), Gaps = 67/840 (7%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++RD F +FF+ KNH    S+P+V  NDPTL+F NAGMNQ+K  FLG + P     K 
Sbjct: 3   SQEIRDKFLEFFKSKNHSIVASAPMVIKNDPTLMFTNAGMNQFKEFFLGNSIP-----KN 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           TR  +TQKC+R  GKHNDL++VGKDTYHHT FEMLGNWSFGDYFK EAI WAWELLT+VY
Sbjct: 58  TRVTDTQKCLRVSGKHNDLEEVGKDTYHHTMFEMLGNWSFGDYFKEEAISWAWELLTEVY 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           ++  D+LY T F GD    L  D EA ++W K LP +R+L    KDNFWEMGD GPCGPC
Sbjct: 118 KIDKDKLYVTIFEGDSSENLERDTEAYNLWSKHLPEARILNGNKKDNFWEMGDQGPCGPC 177

Query: 240 SEIHYDRTGNRD-----AASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     +      ASLVN D P  +E+WN+VFIQ+NR+++GSL+ LPA+H+DTG+
Sbjct: 178 SEIHIDLRSEEEKAKVFGASLVNADHPQVVEVWNLVFIQYNRKANGSLENLPARHIDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ+K SNYDTDVF P+   I+  T ++ Y+        ++ D+A RV+ADH+
Sbjct: 238 GFERLCMALQDKKSNYDTDVFTPLIREIETITNSK-YAVN------EETDIAIRVIADHV 290

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R ++F+IADG  P N G  YV+RRILRRA+RYG   L  ++ F   LV ++ + MG  FP
Sbjct: 291 RAVAFSIADGQLPSNTGAGYVIRRILRRAIRYGFTFLDTKEPFIYKLVAVLTEEMGKAFP 350

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLD 474
           ELK++E  I  +I  EE SF +TL +G+        D  GK +SG  AF L+DTYGFP+D
Sbjct: 351 ELKKQENLIYNVIKEEEQSFLRTLDQGLILLDSIIADTTGKEVSGTKAFELYDTYGFPID 410

Query: 475 LTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATD 534
           LT L+  E+G  +D + F   + + ++RSR+A   +AG   V+  DA             
Sbjct: 411 LTALILSEKGFTLDEKEFQAELQKQKDRSRAAGKIEAGDWTVLQDDAEE----------- 459

Query: 535 DSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGL 594
              +F+ +   K+ +K   T    I +   G++  +V   + FY E GGQ+ D+G++E  
Sbjct: 460 ---EFVGYDTLKTPVKI--TRYRKINTAKEGDQYQLVFNLTPFYPEGGGQVGDKGYLESA 514

Query: 595 FGS-FYVRNVQIYGGFVIHI-GSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLN 652
            G   Y+ + +     +IHI  +L E      +       VD  +R   A NHT TH+L+
Sbjct: 515 NGDVVYITDTKKENNLIIHITKNLPE-----DIANTFTAVVDQKQRNRSAANHTATHLLH 569

Query: 653 FALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEA 712
            ALR +LG HV+QKGS+V    LRFDFSH   V  + L++IE  VN +I+ +L +  + A
Sbjct: 570 QALRSILGTHVEQKGSMVHSGYLRFDFSHFAKVTADELKQIELFVNARIQEQLVLEEQRA 629

Query: 713 TLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNT 772
              +     G  A+FGE Y D VR +  G+                 S ELCGGTH++NT
Sbjct: 630 IPYDQAIAEGAIALFGEKYGDAVRAIRFGK-----------------SMELCGGTHVANT 672

Query: 773 REAEAFALLSEEGIAKGIRRITAVTTGLAYKAF-------EAACSLEKEVDDASKIEGSL 825
            +   F + SE  +A GIRRI A+T       F       EA   L     + +K  GSL
Sbjct: 673 GDIWYFKIKSEGAVAAGIRRIEAITGDAVMGYFEDQDEELEAVRDLLNNSKEPAKAIGSL 732

Query: 826 LEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKV 885
            E+N   K Q  V      K +K   +T E    NG  F ++R EV LDA  +++   ++
Sbjct: 733 QEENNELKRQLDVLLAEKAKGLKNELKT-EVKEVNGINF-LAR-EVDLDANGIKDVSFQL 789


>gi|397689734|ref|YP_006526988.1| alanyl-tRNA synthetase [Melioribacter roseus P3M]
 gi|395811226|gb|AFN73975.1| alanyl-tRNA synthetase [Melioribacter roseus P3M]
          Length = 871

 Score =  615 bits (1586), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 333/748 (44%), Positives = 462/748 (61%), Gaps = 56/748 (7%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R  F  FF ++ H    S+PV+P  DPTLLF NAGMNQ+K +FLGT        + 
Sbjct: 3   SNQIRQQFLDFFAERGHKIVPSAPVIPHGDPTLLFTNAGMNQFKDVFLGTGS-----REY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            RA +TQKCIR  GKHNDL++VG DTYHHTFFEMLGNWSFGDY+K EAI WAWELLT+V+
Sbjct: 58  KRAADTQKCIRVSGKHNDLEEVGHDTYHHTFFEMLGNWSFGDYYKKEAIAWAWELLTEVW 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +LP +RL+AT +  D++A     +E        +  + +L F  KDNFWEMG+TGPCGPC
Sbjct: 118 KLPKERLWATVYRTDDEAFQYWKSETD------INPNHILKFDEKDNFWEMGETGPCGPC 171

Query: 240 SEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERL 299
           SEIH + + + D   LVN   P CIEIWN+VFIQ++R+  G L  LPA+HVDTG+GFER+
Sbjct: 172 SEIHINLSDDYDNPMLVNAGSPLCIEIWNLVFIQYHRDETGKLNELPARHVDTGMGFERI 231

Query: 300 TSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADK---VDMAYRVVADHIRT 356
           T++LQ K SNYDTD+F PI  AI+  +G + Y   + A+D  +   V++A RV+ADHIRT
Sbjct: 232 TAVLQGKKSNYDTDIFTPIISAIENLSGYK-YDYALPAEDKSEQGVVNIAMRVIADHIRT 290

Query: 357 LSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPEL 416
           L+FAIADG+ PGN+GR YVLRRILRRA RYG + L  ++ F   +V+ VVK    VFPE+
Sbjct: 291 LTFAIADGAIPGNDGRGYVLRRILRRASRYGRK-LNLKEPFLFKIVDTVVKNFSHVFPEI 349

Query: 417 KQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK---VLSGQDAFILWDTYGFPL 473
           K+ + +I  II AEE SF  TL +G+E F    + +Q +   V+ G + F L+DTYGFP+
Sbjct: 350 KENQNNIERIINAEEESFNVTLDRGLELFDSLIEKLQSEKKTVIPGSEVFKLYDTYGFPV 409

Query: 474 DLTQLMAEERGLLVDIEGFNNAMDEARERSR-SAQNKQAGGAIVMDADATAALHKRGVLA 532
           DLT +MA E+G  +D +GFN  M E + R+R SA++K    ++  D+       ++    
Sbjct: 410 DLTNVMAREQGFTIDEDGFNKLMAEQKARARKSARDKSTATSLKNDSIEDFTFVEKA--- 466

Query: 533 TDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGF-- 590
                +F  + + KS  K I    +       G+ + +VL +S FY E GGQ+ D GF  
Sbjct: 467 ---PTQFTGYDELKSEAKIIGLKED-------GDNILLVLDNSPFYVEAGGQVSDTGFII 516

Query: 591 IEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHM 650
           I+G+     V NV      ++H+ + ++   +   G  V  +VD  RR  I  NH+ TH 
Sbjct: 517 IDGI--KLPVVNVAKLDNMIVHVVNKSD-EFKLEPGMNVTVQVDEKRRWDIMRNHSATHF 573

Query: 651 LNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD-VFS 709
           L+ ALRE+LG HV Q GS V P++LRFDFSH +    + L +IES++NE+++  L  +  
Sbjct: 574 LHKALREILGTHVQQSGSYVGPDRLRFDFSHFEKPSRQQLEQIESLINEKLRENLPLIHH 633

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
           ++    +AK +  L   FG+ Y + V VV  G                  + E CGGTH+
Sbjct: 634 RDIPFEQAKEMGAL-MFFGDKYGENVNVVQFG----------------DYTMEFCGGTHV 676

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVT 797
            N+ +   F ++SE  IA G+RRI AVT
Sbjct: 677 KNSSQIGLFKIISESSIASGVRRIEAVT 704


>gi|393778864|ref|ZP_10367125.1| alanine--tRNA ligase [Capnocytophaga sp. oral taxon 412 str. F0487]
 gi|392611433|gb|EIW94172.1| alanine--tRNA ligase [Capnocytophaga sp. oral taxon 412 str. F0487]
          Length = 877

 Score =  615 bits (1585), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 353/884 (39%), Positives = 506/884 (57%), Gaps = 74/884 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F KFFE K H    S+P+V  NDPTL+F NAGMNQ+K  FLG A P     K 
Sbjct: 3   SQEIREQFLKFFESKGHTIVPSAPMVVKNDPTLMFTNAGMNQFKEFFLGNAKP-----KY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  +TQKC+R  GKHNDL++VG+DTYHHT FEMLGNWSFGDYFK EAI WAWELLT++Y
Sbjct: 58  KRVADTQKCLRVSGKHNDLEEVGRDTYHHTMFEMLGNWSFGDYFKKEAISWAWELLTEIY 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           ++P + LY T F G E+ G+  D EA DIW + +  + +L    KDNFWEMGD GPCGPC
Sbjct: 118 KIPKENLYVTVFEGSEEEGVPFDQEAYDIWKERIAENHILLGNKKDNFWEMGDQGPCGPC 177

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           +EIH D   + + A      LVNND P  IEIWN VF++FNR++DGSL+ LP+++VDTG+
Sbjct: 178 TEIHVDIRSDEEKAKVPGRDLVNNDHPQVIEIWNNVFMEFNRKADGSLEKLPSRNVDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL  +LQ K SNYDTDVF P+   +++ T +R  SG     + ++V++A RV++DHI
Sbjct: 238 GFERLCMVLQKKQSNYDTDVFTPLIHKVEEITQSRYTSGDRVTAEQEQVNIAIRVISDHI 297

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R ++FAI DG  P N G  YV+RRILRRA+RYG   L  ++ F   LV  +   MG  FP
Sbjct: 298 RAVAFAITDGQLPSNNGAGYVIRRILRRAIRYGFTFLNQKEPFIYKLVETLSNQMGGTFP 357

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLD 474
           EL++++  I  +I  EEASF +TL +G+       Q+  GK LSG  AF L+DTYGFP D
Sbjct: 358 ELEKQQFLIMSVIKEEEASFLRTLEQGLLMLDVMIQNSPGKQLSGGKAFELYDTYGFPKD 417

Query: 475 LTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATD 534
           LT L+  E+GL +D   F   + + +ERSR+A   +A   +              +L  D
Sbjct: 418 LTALILSEKGLTMDEASFEEQLQKQKERSRAAAQIKADDWV--------------ILRDD 463

Query: 535 DSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGL 594
           D  +FI +   ++V++ +      +ES   G    +V  ++ FY E GGQI D+G ++  
Sbjct: 464 DEEEFIGYDTLEAVVRLVKYRR--VESQKDGTHFQLVFNTTPFYPEGGGQIGDKGTLQSA 521

Query: 595 FGSF-YVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNF 653
            G   Y+ + +     +IHI          ++ +    +V    R++   NH+ TH+L+ 
Sbjct: 522 NGELIYILDTKKENNLIIHISEHLPT----NLNDPFKAEVHSISREMAEANHSATHLLHQ 577

Query: 654 ALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEAT 713
           ALREVLG HV+QKGS V PE LRFDFSH   +  E L+++E +VN +I  ++ +      
Sbjct: 578 ALREVLGTHVEQKGSRVAPETLRFDFSHFAKLTEEELKKVEQLVNRRIFEKIPLQEHRNI 637

Query: 714 LAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTR 773
             +    +G  A+FGE Y D VR++  G                  S ELCGGTH+ NT 
Sbjct: 638 HMQQAVESGAMALFGEKYGDRVRMIQFGD-----------------SKELCGGTHVKNTG 680

Query: 774 EAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV-------DDASKIEGSLL 826
           +   F ++SE  +A GIRRI A+T G A + F     L +++        D  K    L 
Sbjct: 681 DIWYFKIISEGAVAAGIRRIEAITRGGAMQYFTEQEQLVEQIKETLKNAQDPVKAITHLQ 740

Query: 827 EKN--------QVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAV 878
           E+N        Q+RK Q K  + +L+         AE    NG    + +V+   + A +
Sbjct: 741 EENAALHKELEQLRKEQAKQLKTSLK---------AEFTEVNGVQCLVKQVDA--EVATL 789

Query: 879 REAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLE 922
           ++   ++  +     + F++     KA++   + ++  Q+K L+
Sbjct: 790 KDLAFELGNEVKNAFIFFASAHEEGKALLLCYINKELAQAKGLD 833


>gi|124009945|ref|ZP_01694610.1| alanyl-tRNA synthetase [Microscilla marina ATCC 23134]
 gi|123984029|gb|EAY24407.1| alanyl-tRNA synthetase [Microscilla marina ATCC 23134]
          Length = 883

 Score =  615 bits (1585), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 369/929 (39%), Positives = 513/929 (55%), Gaps = 74/929 (7%)

Query: 63  VRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRA 122
           +R  F  FF +K H    S+P+V  NDPTL+F NAGMNQ+K  FLGT     +     R 
Sbjct: 6   IRQKFLDFFREKQHQIVDSAPLVVKNDPTLMFTNAGMNQFKDFFLGTKTAENR-----RV 60

Query: 123 CNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLP 182
            +TQKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWELLT+V+ LP
Sbjct: 61  ADTQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAIAWAWELLTEVFELP 120

Query: 183 ADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPCSEI 242
            DRLY T F GD+   L PD EA DIW K++   R++    +DNFWEMG+TGPCGPCSEI
Sbjct: 121 KDRLYVTVFEGDKGDSLEPDQEAFDIWKKYINEDRIIYASKEDNFWEMGETGPCGPCSEI 180

Query: 243 HYD-RTGNRDAAS----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFE 297
           H D R  N  A +    LVN DDP  +EIWN+VFIQFNR ++ SL+ LP KHVDTG+GFE
Sbjct: 181 HIDLRDANEIAKTPGKGLVNQDDPQVVEIWNLVFIQFNRMANKSLQNLPDKHVDTGMGFE 240

Query: 298 RLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTL 357
           RL   +Q K SNYDTDVF P+   + +  G +   GK      +K+D+A RV+ADHIR +
Sbjct: 241 RLAMAIQGKKSNYDTDVFQPMIQYLAKVAGTQ--YGK-----EEKIDIALRVIADHIRAI 293

Query: 358 SFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELK 417
           SFAI DG  PGN G  YV+RRILRRAVRYG   L   + F + LV ++ +   +VFPELK
Sbjct: 294 SFAITDGQLPGNNGAGYVIRRILRRAVRYGYSYLGFNEPFLHTLVPMLSEQFAEVFPELK 353

Query: 418 QREAHIREIIAAEEASFGKTL---LKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLD 474
           Q++AH+  II  EE SF +TL   LK +++     ++ Q K ++G D F L D YGFP D
Sbjct: 354 QQQAHVSNIIIQEEKSFLRTLANGLKLLDEVVAKTKEKQQKEIAGIDVFTLSDRYGFPSD 413

Query: 475 LTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATD 534
           LT L+A E GL +D  GF   + + + RS+    K  G  IV+++  +            
Sbjct: 414 LTNLVASENGLGIDEAGFKEELKKQKLRSQQDAQKSTGDWIVLNSGES------------ 461

Query: 535 DSFKFIWFQDHKSVIKAI-YTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIE- 592
              +FI + +  S  K + Y   E    V    +  IVL ++ FYAE GGQ+ D G +E 
Sbjct: 462 ---EFIGYDETSSFTKVLRYREIE----VKKKKQYEIVLETTPFYAESGGQVGDTGSLEF 514

Query: 593 -GLFGSFYVR--NVQIYGGFVIHIGSLTEGAGRFSVGE-EVICKVDYDRRKLIAPNHTCT 648
               G+  V   + +     +IH     +      + + EV  +V   RR+L   NH+ T
Sbjct: 515 RAEAGTVTVPVIDTKKENDLIIHYSPKNDFTKIADLAQVEVFAQVKEQRRRLTENNHSAT 574

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+++ ALR+VLG HV+Q+GS+V    LRFDFSH   +  E +  +E IVNE+I+  + + 
Sbjct: 575 HLVHSALRQVLGQHVEQRGSLVNDVILRFDFSHNAKMTDEEIAEVERIVNEKIRENIALD 634

Query: 709 SKEAT-LAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGT 767
            + A    EA    G   +FGE Y D VRV+                   + S ELCGG 
Sbjct: 635 ERRAVPYKEAIESLGATGLFGEKYGDTVRVITFDE---------------NYSRELCGGC 679

Query: 768 HLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK------- 820
           H+ +T     F +++E  +A G+RRI AVT   A +  +   +L  +V D  K       
Sbjct: 680 HVPSTGVIGFFKIITEASVASGVRRIEAVTATKAEEYVQNQVALVNQVKDLLKNPKDLPK 739

Query: 821 -IEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVR 879
            IE  + EK  + K  + +  + +Q   +   +T +   +NG  F   +V +   A A++
Sbjct: 740 AIESLIKEKTDLSKQIEVLENQQVQALKQGLLDTVK--QTNGINFIAQKVSLP-SADALK 796

Query: 880 EAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCG 939
                V + +    MV ++D    K  +   + +   + K L   + +    + +K   G
Sbjct: 797 NLAFDVRKNQDNLFMVLASD-IKGKPQIAVMISDNLVEEKSLNAGKIVKELAREIK-GGG 854

Query: 940 KGKGGLASGQGTDAAQVTPAMDLAAEFAA 968
            G+   A+  G DA  +   ++ A EF A
Sbjct: 855 GGQAFFATAGGKDATGLDKVVERAEEFVA 883


>gi|224025892|ref|ZP_03644258.1| hypothetical protein BACCOPRO_02638 [Bacteroides coprophilus DSM
           18228]
 gi|224019128|gb|EEF77126.1| hypothetical protein BACCOPRO_02638 [Bacteroides coprophilus DSM
           18228]
          Length = 872

 Score =  615 bits (1585), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 368/925 (39%), Positives = 507/925 (54%), Gaps = 71/925 (7%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++RD+F KFFE K H    S+P+V  +DPTL+F NAGMNQ+K I LG        +K 
Sbjct: 4   ANEIRDSFVKFFESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGN-----HPAKY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK E I WA+E L  V 
Sbjct: 59  KRVTDSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEVIGWAYEYLVTVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +L    LY T F G  + GLA D+EA   W +F P   ++     DNFWEMGDTGPCGPC
Sbjct: 119 KLDPKDLYVTVFEGSPEEGLARDDEAAGYWGQFFPEDHIINGNKHDNFWEMGDTGPCGPC 178

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + A+     LVN D P  IEIWN+VF+Q+NR++DGSL+PLPAK +DTG+
Sbjct: 179 SEIHIDSRSEEEKAAVPGRELVNKDHPQVIEIWNLVFMQYNRKADGSLEPLPAKVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF PI   I         SGK   DD +KVD+A RVVADHI
Sbjct: 239 GFERLVRTLQGKTSNYDTDVFQPIIKVIGD------LSGKKYGDD-EKVDVAMRVVADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++F+I DG  P N    YV+RRILRRAVRY    L  +  F   LV ++++ MG  +P
Sbjct: 292 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYAYTFLGQKQAFMYKLVPVLIENMGGAYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ--GKV-LSGQDAFILWDTYGF 471
           ELK ++A I +++  EE SF +TL  GI   +K   + +  GK  +SG DAF L+DT+GF
Sbjct: 352 ELKAQQALIEKVMKEEEESFLRTLETGIRLLEKTMNEAKAAGKTEISGVDAFTLYDTFGF 411

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           P DLT+L+  E GL  D++GF   M + +ER+R+A   + G  + +    T  +   G  
Sbjct: 412 PFDLTELILRENGLTADVKGFEAEMQKQKERARNAAAVETGDWVTLKEGETTFV---GYD 468

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            T+     + ++  K   + +Y                IVL+ + FYAE GGQ+ D G +
Sbjct: 469 YTEYETSILRYRQVKQKNQTLYQ---------------IVLSDTPFYAESGGQVGDTGVL 513

Query: 592 EGLFGSFYVRNVQIYGGFVIHIG-SLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHM 650
              F +  + + +      IHI   L E      +   ++  VD D+R   A NH+CTH+
Sbjct: 514 VSEFETIDIIDTKKENNLPIHITKKLPE-----HLDAPMMACVDTDKRAACAANHSCTHL 568

Query: 651 LNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSK 710
           L+ ALR+VLG HV+QKGS+V P+ LRFDFSH + V PE LR +E +VN +I+  + +   
Sbjct: 569 LDEALRQVLGTHVEQKGSLVTPDSLRFDFSHFQKVTPEQLREVEHLVNAKIRENIPLTEY 628

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
                E     G  A+FGE Y D VRVV  G                  S E CGGTH+S
Sbjct: 629 RNLPIEKARELGAIALFGEKYGDEVRVVQFGS-----------------SIEFCGGTHVS 671

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAA----CSLEKEVDDASKIEGSLL 826
            T +     ++SE  +A G+RRI AVT     + F+        L+   ++A  ++ ++ 
Sbjct: 672 ATGKIGMVKIISESSVAAGVRRIEAVTGAKVEEIFDTVQDTLSDLKALFNNAPDLKAAIS 731

Query: 827 EKNQVRKAQKKVAEENL-QKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKV 885
           +        KK  EE + +K   V  +  E A        I  V + + A AV+    ++
Sbjct: 732 KYIDENAGLKKQVEEFMKEKEASVKNKLIEGAKDINGVKVIKAV-LPMPADAVKNIAFQL 790

Query: 886 IEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQ-LEVSEWLTAALQPLKGRCGKGKGG 944
             Q    + V       NK ++   + E  DQ K  L   + +  A + ++G  G G+  
Sbjct: 791 KGQFTENLFVVIGSVFDNKPLLTVTMSE--DQVKAGLNAGQLVREAAKLIQG-GGGGQPH 847

Query: 945 LASGQGTDAAQVTPAMDLAAEFAAM 969
            A+  G +   ++ A+D   E A  
Sbjct: 848 FATAGGKNPDGLSAAVDKVIELAGF 872


>gi|424034008|ref|ZP_17773418.1| alanine--tRNA ligase [Vibrio cholerae HENC-01]
 gi|408873752|gb|EKM12941.1| alanine--tRNA ligase [Vibrio cholerae HENC-01]
          Length = 860

 Score =  614 bits (1583), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 374/915 (40%), Positives = 515/915 (56%), Gaps = 88/915 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR+ F KFFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRNAFLKFFESKGHQIVESSSLVPHNDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT+  +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAISFAWEFLTETLKL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           PADRL  T +          D+EA DIW K   +PA R++  G K        DNFW+MG
Sbjct: 122 PADRLLVTVY--------ETDDEAFDIWNKKVGVPADRIIRIGDKKGGKPYESDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
           DTGPCGPC+EI YD      G R        D    IEIWN VF+QFNR +DG+++PLP 
Sbjct: 174 DTGPCGPCTEIFYDHGEHIWGGRPGTP--EEDGDRFIEIWNNVFMQFNRHADGTMEPLPK 231

Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
             VDTG+G ER+++I+Q   SNY+ DVF  +  A  +  G    S           + + 
Sbjct: 232 PSVDTGMGIERISAIMQGVHSNYEIDVFQALIKAAAEVIGYEDLS-----------NQSL 280

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RV+ADHIR+ SF I DG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF+ LV ++ +
Sbjct: 281 RVIADHIRSCSFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGAFFHKLVGVLAE 339

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWD 467
           +MG    ELK+++A + +++  EE +FG+TL +G+    +A  ++ GKVL G+  F L+D
Sbjct: 340 IMGTAGEELKRQQAVVEKVLRIEEENFGRTLERGMAILNEALDNLDGKVLDGETVFKLYD 399

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
           TYGFP DLT  +A ER   +D EGF  AM+E R+R+R A N           D  AA+  
Sbjct: 400 TYGFPADLTNDVAREREFAIDEEGFEKAMEEQRQRAREAGN--------FGTDYNAAIK- 450

Query: 528 RGVLATDDSFKFIWFQDHK--SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
                 D   +F  +   K  S + A++     +ES+  G++  IVL  + FYAE GGQ 
Sbjct: 451 -----VDTQTEFCGYAGTKGSSSVAAMFVEGNEVESLSAGDKAIIVLGETPFYAESGGQC 505

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D G I    G F V + Q  G  + H G + EG    + G+EV   VD +RR  I+ NH
Sbjct: 506 GDAGEIRTESGVFRVEDTQKLGNAMAHHGVMAEGV--LAKGDEVATIVDAERRAAISLNH 563

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+L+ ALR+VLG+HV QKGS+V  + LRFDFSH + V    L+ +E +VN QI+   
Sbjct: 564 SATHLLHAALRQVLGEHVTQKGSLVKADSLRFDFSHLEAVTAAELKEVERLVNAQIRRNH 623

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    +  AK   G  A+FGE Y D VRV+++G                  S ELCG
Sbjct: 624 TIETNVMDIESAKK-KGAMALFGEKYDDEVRVLSMG----------------DFSTELCG 666

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSL 825
           G H SNT +   F + SE GIA GIRRI AVT   A  A EA  +  +E    S  +   
Sbjct: 667 GIHASNTGDIGLFKITSEGGIAAGIRRIEAVTGEGALDAIEAQAAKYEEKLAESAQKAKS 726

Query: 826 LEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKV 885
           LEK +++K + K+A      A + A    +    NG    I+ +E G D   +R  V  +
Sbjct: 727 LEK-EIQKLKDKMA------AAESANIMGKVQDINGTKVLIAALE-GADNKNLRTMVDDI 778

Query: 886 IEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGL 945
             Q G  V++ + +   +K  + AGV +  D   +++  + +    + + G+ G G+  +
Sbjct: 779 KNQVGSGVILLA-NVNDDKIGLIAGVTK--DLIGKVKAGDLVKMVAEQVGGKGG-GRPDM 834

Query: 946 ASGQGTDAAQVTPAM 960
           A   GTD A +  A+
Sbjct: 835 AQAGGTDVAALPAAI 849


>gi|429214615|ref|ZP_19205778.1| alanyl-tRNA synthetase [Pseudomonas sp. M1]
 gi|428154901|gb|EKX01451.1| alanyl-tRNA synthetase [Pseudomonas sp. M1]
          Length = 874

 Score =  614 bits (1583), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 379/933 (40%), Positives = 526/933 (56%), Gaps = 92/933 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F +FFE+K H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLRFFEEKGHTRVASSSLIPANDPTLLFTNAGMNQFKDCFLGL-----EKRAY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           TRA  +QKC+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT  K
Sbjct: 58  TRATTSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWEFLTSDK 117

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFW 228
              LP D+L+ T +        A D+EA DIW +   +PA R++  G         DNFW
Sbjct: 118 WLNLPKDKLWVTVY--------ASDDEAYDIWTQEVGVPAERMVRIGDNKGAPYASDNFW 169

Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
            MGDTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG + PLP
Sbjct: 170 AMGDTGPCGPCTEIFYDHGADIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVMHPLP 229

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
           A  VDTG+G ER++++LQ+  SNY+ D+F  +  A  +A G          DDA  +   
Sbjct: 230 APSVDTGMGLERISAVLQHVHSNYEIDLFQSLLKASAEAIG-------CANDDAPSL--- 279

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            +VVADHIR+ SF IADG  P NEGR YVLRRI+RRA R+G++ L A+  FF+ +V  +V
Sbjct: 280 -KVVADHIRSCSFLIADGVLPSNEGRGYVLRRIIRRACRHGNK-LGAKGSFFHKIVAALV 337

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
             MG+ FPELKQ++AHI  ++  EE  F KTL +G++  ++   +++G V+ G   F L+
Sbjct: 338 AEMGEAFPELKQQQAHIERVLKTEEEQFAKTLEQGLKILEQDLSELKGSVIPGNVVFKLY 397

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFP+DLT  +A ER L +D EGF   M+  RER+RSA       A  MD +A     
Sbjct: 398 DTYGFPVDLTNDIARERSLTLDEEGFEREMEAQRERARSAS------AFGMDYNA----- 446

Query: 527 KRGVLATDDSFKFIWFQDHKSV--IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
              ++  D   +F+ +Q       I A++   + +E +  G E  +VL  + FYAE GGQ
Sbjct: 447 ---LVKVDGDTRFLGYQGVSGAGQIIALFKDGKAVEKLNEGEEGVVVLDQTPFYAESGGQ 503

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           + D G + G    F VR+    GG  +H G + +G+   SVG  V  +VD   R+  A N
Sbjct: 504 VGDCGTLSGAGVRFDVRDTTKAGGAHLHHGIVAQGS--LSVGAAVKAEVDASVRQATALN 561

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ ALR+VLGDHV QKGS+V  ++LRFDFSH + + PE L+++E IVN +I+A 
Sbjct: 562 HSATHLLHAALRQVLGDHVQQKGSLVDSQRLRFDFSHFEAIKPEQLKQLEDIVNREIRAN 621

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
             V ++E  +  AK   G  A+FGE Y D VRV+ +G                  S ELC
Sbjct: 622 SVVETEETDIDTAKA-KGAMALFGEKYGDQVRVLTMGG---------------GFSVELC 665

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGS 824
           GGTH+  T +   F + SE G+A G+RRI AVT   A      A    KE   A  ++GS
Sbjct: 666 GGTHVGRTGDIGLFKITSEGGVAAGVRRIEAVTGAAALAYLNGAEEQLKEA--AGLVKGS 723

Query: 825 LLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEV-----------GL 873
              ++ +      + E N Q   ++    A+AA++ G     S V+V           GL
Sbjct: 724 ---RDNLLDKLAGLLERNRQLEKELEQLKAKAASAAGDDLAGSAVDVAGVKVLAARLDGL 780

Query: 874 DAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQP 933
           D  A+   V ++  + G  V++        K V+ AGV +  D + +L+  + L      
Sbjct: 781 DGKALLALVDQLKNKLGSGVILLGG-VFEEKVVLVAGVTQ--DLAAKLKAGD-LMKQAAA 836

Query: 934 LKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEF 966
             G  G G+  +A G GTDA ++  A+ LA  F
Sbjct: 837 AVGGKGGGRPDMAQGGGTDAGKLDEALALAKAF 869


>gi|313676999|ref|YP_004054995.1| alanyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
 gi|312943697|gb|ADR22887.1| alanyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
          Length = 876

 Score =  614 bits (1583), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 340/796 (42%), Positives = 469/796 (58%), Gaps = 68/796 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           ++++R  F  FF++K H    S+P+V  +DPTL+F NAGMNQ+K  FLG      ++++ 
Sbjct: 3   SSEIRKKFLNFFQEKEHKIVPSAPMVIKDDPTLMFTNAGMNQFKDYFLGN-----KVAEA 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           TR  +TQKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAIEW+WELLT ++
Sbjct: 58  TRVTDTQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAIEWSWELLTDIF 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +LP +RLY T F GD+  G+  D EA D W   +  SR+L     DNFWEMGDTGPCGP 
Sbjct: 118 KLPKERLYVTVFEGDKADGIPFDQEAYDFWKGHIDESRILKGDKNDNFWEMGDTGPCGPA 177

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     D A      LVNND P  +EIWN+VFIQFNR++DGSL  LPA+H+DTG+
Sbjct: 178 SEIHVDLRDEADIAKIPGKDLVNNDHPLVVEIWNLVFIQFNRKADGSLHALPAQHIDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFER+   +QNK SNYDTDVF P+ D + + +G      K G  +  K+D+A+RV+ DHI
Sbjct: 238 GFERICMAIQNKKSNYDTDVFTPLLDELAKISGK-----KYG--ELSKIDIAFRVIVDHI 290

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R +S +I+DG  P N    YV+RRILRRAVRYG   L  ++ F   LV I+ K   +VFP
Sbjct: 291 RAISLSISDGQLPSNNKAGYVIRRILRRAVRYGYTFLDLKEPFLFKLVPILAKQFEEVFP 350

Query: 415 ELKQREAHIREIIAAEEASFGKTL---LKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGF 471
           ELK ++  + ++I  EE +F +TL   LK +E  K          +SG  AF L+DTYGF
Sbjct: 351 ELKAQQELVEKVIKEEETAFLRTLENGLKRLESIKAELSSSGNATISGAVAFELYDTYGF 410

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT L+A+E GL VD +GF  AM+E + RS+SA   + G   +++         R V 
Sbjct: 411 PLDLTALIAKENGLTVDEKGFEQAMNEQKNRSKSAAKMETGDWQIVN-------EGRDV- 462

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGN--EVGIVLASSSFYAEQGGQIFDEG 589
                 +F+ + + K+  K +        SV   N  ++ +VL  + FYAE GGQI D G
Sbjct: 463 ------EFVGYDEVKADAKILR-----YRSVKNKNKEQIQLVLDKTPFYAESGGQIGDTG 511

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
            ++    +  V + +     ++H            +  +V  ++D DRR+ I  NH+ TH
Sbjct: 512 ILKVSNETIKVLDTKKENDLIVHFVDKIPA----QLDAKVHAQIDNDRRRKIVYNHSATH 567

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +++ ALREVLGDHV QKGS+V  + LRFDFSH   +  E + ++E  VNE+I+  +    
Sbjct: 568 LVHAALREVLGDHVQQKGSLVSDKLLRFDFSHFSKMTDEEILKVERRVNEKIRENIPQQE 627

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
           +     E     G  A+FGE Y D VR++           DP      + S ELCGG H+
Sbjct: 628 ERNIPIEEAKAKGAMALFGEKYGDTVRMITF---------DP------NYSVELCGGVHV 672

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV--------DDASKI 821
             T     F + +E  +A GIRRI AVT   A +      ++ K+V        D A  +
Sbjct: 673 PATGNIGQFKITTETSVAAGIRRIEAVTGEKAEEYHLDQEAILKQVNALLKSPKDLAQAV 732

Query: 822 EGSLLEKNQVRKAQKK 837
           E  + EKN+++K+ +K
Sbjct: 733 EQLMKEKNELQKSLEK 748


>gi|256818974|ref|YP_003140253.1| alanyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
 gi|256580557|gb|ACU91692.1| alanyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
          Length = 877

 Score =  614 bits (1583), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 354/884 (40%), Positives = 506/884 (57%), Gaps = 74/884 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F KFFE K H    S+P+V  NDPTL+F NAGMNQ+K  FLG A P     K 
Sbjct: 3   SQEIREQFLKFFESKGHTIVPSAPMVVKNDPTLMFTNAGMNQFKEFFLGNAKP-----KY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  +TQKC+R  GKHNDL++VG+DTYHHT FEMLGNWSFGDYFK EAI WAWELLT++Y
Sbjct: 58  KRVADTQKCLRVSGKHNDLEEVGRDTYHHTMFEMLGNWSFGDYFKKEAISWAWELLTEIY 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           ++P + LY T F G E+ G+  D EA DIW + +  + +L    KDNFWEMGD GPCGPC
Sbjct: 118 KIPKENLYVTVFEGSEEDGVPFDQEAYDIWKERIAENHILLGNKKDNFWEMGDQGPCGPC 177

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           +EIH D   + + A      LVNND P  IEIWN VF++FNR++DGSL+ LP+++VDTG+
Sbjct: 178 TEIHVDIRSDEEKAKVPGRDLVNNDYPQVIEIWNNVFMEFNRKADGSLEKLPSRNVDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL  +LQ K SNYDTDVF P+   +++ T +R  SG     + ++V++A RV++DHI
Sbjct: 238 GFERLCMVLQKKQSNYDTDVFTPLIHKVEEITQSRYTSGDRVTAEQEQVNIAIRVISDHI 297

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R ++FAI DG  P N G  YV+RRILRRA+RYG   L  ++ F   LV  +   MG  FP
Sbjct: 298 RAVAFAITDGQLPSNNGAGYVIRRILRRAIRYGFTFLNQKEPFIYKLVETLSNQMGGTFP 357

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLD 474
           EL++++  I  +I  EEASF +TL +G+       Q+  GK LSG  AF L+DTYGFP D
Sbjct: 358 ELEKQQFLIMSVIKEEEASFLRTLEQGLLMLDVMIQNSPGKQLSGGKAFELYDTYGFPKD 417

Query: 475 LTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATD 534
           LT L+  E+GL +D   F   + + +ERSR+A   +A   +              +L  D
Sbjct: 418 LTALILSEKGLTMDEASFEEQLQKQKERSRAAAQIKADDWV--------------ILRDD 463

Query: 535 DSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGL 594
           D  +FI +   ++V++ +      +ES   G    +V  ++ FY E GGQ+ D+G ++  
Sbjct: 464 DEEEFIGYDTLEAVVRLVKYRR--VESQKDGTHFQLVFNTTPFYPEGGGQVGDKGTLQSA 521

Query: 595 FGSF-YVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNF 653
            G   Y+ + +     +IHI          ++ +    +V    R++   NH+ TH+L+ 
Sbjct: 522 NGELIYILDTKKENNLIIHISEHLPT----NLNDPFKAEVHSISREMAEANHSATHLLHQ 577

Query: 654 ALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEAT 713
           ALREVLG HV+QKGS V PE LRFDFSH   +  E L+++E +VN +I  ++ +      
Sbjct: 578 ALREVLGTHVEQKGSRVAPETLRFDFSHFAKLTEEELKKVEQLVNRRIFEKIPLQEHRNI 637

Query: 714 LAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTR 773
             +    +G  A+FGE Y D VR++  G                  S ELCGGTH+ NT 
Sbjct: 638 PMQQAVESGAMALFGEKYGDRVRMIQFGD-----------------SKELCGGTHVKNTG 680

Query: 774 EAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV-------DDASKIEGSLL 826
           +   F ++SE  +A GIRRI A+T G A K F     L +++        D  K    L 
Sbjct: 681 DIWYFKIISEGAVAAGIRRIEAITRGGAMKYFTEQEQLVEQIKETLKNAQDPVKAIRHLQ 740

Query: 827 EKN--------QVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAV 878
           E+N        Q+RK Q K     L+ ++K     AE    NG    + +V+   + A +
Sbjct: 741 EENAALHKELEQLRKEQAK----QLKTSIK-----AEFTEVNGVQCLVKQVDA--EVATL 789

Query: 879 REAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLE 922
           ++   ++  +     + F++     KA++   + +   Q+K L+
Sbjct: 790 KDLAFELGNEVKNAFIFFASAHEEGKALLLCYINKDLAQAKGLD 833


>gi|198276957|ref|ZP_03209488.1| hypothetical protein BACPLE_03162 [Bacteroides plebeius DSM 17135]
 gi|198270482|gb|EDY94752.1| alanine--tRNA ligase [Bacteroides plebeius DSM 17135]
          Length = 872

 Score =  613 bits (1581), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 344/812 (42%), Positives = 463/812 (57%), Gaps = 69/812 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++RD+F KFFE K H    S+P+V  +DPTL+F NAGMNQ+K I LG        +K 
Sbjct: 4   ANEIRDSFVKFFESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGN-----HPAKY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WA+E L  + 
Sbjct: 59  KRVTDSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAYEYLVSIL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +L    LY T F G    G++ D+EA   W +F P   ++     DNFWEMGDTGPCGPC
Sbjct: 119 KLDPKDLYVTVFEGSPSEGISRDDEAASYWGQFFPEDHIINGNKHDNFWEMGDTGPCGPC 178

Query: 240 SEIHYD-RTGNRDAA----SLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D R+    AA     LVN D P  IEIWN+VF+Q+NR++DG+L+PLPAK +DTG+
Sbjct: 179 SEIHIDSRSAEEKAAVPGRELVNKDHPQVIEIWNLVFMQYNRKADGTLEPLPAKVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF PI   I         SGK   DD +K D+A RVVADHI
Sbjct: 239 GFERLVRTLQGKTSNYDTDVFQPIIKVIGD------LSGKKYGDD-EKTDVAMRVVADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++F+I DG  P N    YV+RRILRRAVRY    L  +  F   LV ++++ MG  +P
Sbjct: 292 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYAYTFLGQKQAFMYKLVPVLIENMGGAYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ--GKV-LSGQDAFILWDTYGF 471
           ELK ++A I +++  EE SF +TL  GI   +K   + +  GK  +SG DAF L+DT+GF
Sbjct: 352 ELKAQQALIEKVMKEEEESFLRTLETGIRLLEKTMNETKAAGKTEISGVDAFTLYDTFGF 411

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           P DLT+L+  E GL  D++GF   M + +ER+R+A   + G  + +    T  +   G  
Sbjct: 412 PFDLTELILRENGLTADVKGFEAEMQKQKERARNAAAVETGDWVTLKEGETTFV---GYD 468

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            T+     + ++  K   + +Y                IVL+ + FYAE GGQ+ D G +
Sbjct: 469 YTEYETSILRYRQIKQKNQTLYQ---------------IVLSETPFYAESGGQVGDTGVL 513

Query: 592 EGLFGSFYVRNVQIYGGFVIHIG-SLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHM 650
              F +  + + +      IHI   L E      +   ++  VD D+R   A NH+CTH+
Sbjct: 514 VSEFETIDIIDTKKENNLPIHIAKKLPE-----HLEAPMMACVDTDKRAACAANHSCTHL 568

Query: 651 LNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSK 710
           L+ ALR+VLG HV+QKGS+V PE LRFDFSH + V PE +R +E +VN +I+  + +   
Sbjct: 569 LDEALRQVLGTHVEQKGSLVTPESLRFDFSHFQKVTPEQIREVEHLVNAKIRENVPLTEY 628

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
                E     G  A+FGE Y D VRVV  G                  S E CGGTH+S
Sbjct: 629 RNLPIEKAKELGAIALFGEKYGDEVRVVQFGS-----------------SIEFCGGTHVS 671

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKNQ 830
            T +     ++SE  +A G+RRI AVT     + F+         D  + ++        
Sbjct: 672 ATGKIGMVKIISESSVAAGVRRIEAVTGAKVEEMFDTVQ------DTINDLKALFNNAPD 725

Query: 831 VRKAQKKVAEEN--LQKAVKVATETAEAAASN 860
           ++ A  K  EEN  L+K ++   +  EAA  N
Sbjct: 726 LKAAISKYIEENAGLKKQMEEFMKEKEAAVKN 757


>gi|350532395|ref|ZP_08911336.1| alanyl-tRNA synthetase [Vibrio rotiferianus DAT722]
          Length = 860

 Score =  613 bits (1581), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 373/915 (40%), Positives = 515/915 (56%), Gaps = 88/915 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR+ F KFFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRNAFLKFFESKGHQIVESSSLVPHNDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT+  +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIAFAWEFLTETLKL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           PADRL  T +          D+EA DIW K   +PA R++  G K        DNFW+MG
Sbjct: 122 PADRLLVTVY--------ETDDEAFDIWNKKVGVPADRIIRIGDKKGGKPYESDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
           DTGPCGPC+EI YD      G R        D    IEIWN VF+QFNR +DG+++PLP 
Sbjct: 174 DTGPCGPCTEIFYDHGEHIWGGRPGTP--EEDGDRFIEIWNNVFMQFNRHADGTMEPLPK 231

Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
             VDTG+G ER+++I+Q   SNY+ DVF  +  A  +  G    S           + + 
Sbjct: 232 PSVDTGMGIERISAIMQGVHSNYEIDVFQALIKAAAEVIGYEDLS-----------NQSL 280

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RV+ADHIR+ SF I DG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF+ LV ++  
Sbjct: 281 RVIADHIRSCSFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGAFFHKLVGVLAD 339

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWD 467
           +MG    ELK+++A + +++  EE +FG+TL +G+    +A  ++ GKVL G+  F L+D
Sbjct: 340 IMGTAGEELKRQQAVVEKVLRIEEENFGRTLERGMAILNEALDNLDGKVLDGETVFKLYD 399

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
           TYGFP DLT  +A ER   +D EGF  AM+E R+R+R A N           D  AA+  
Sbjct: 400 TYGFPADLTNDVAREREFAIDEEGFEKAMEEQRQRAREAGN--------FGTDYNAAIK- 450

Query: 528 RGVLATDDSFKFIWFQDHK--SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
                 D   +F  +   K  S + A++     ++S+  G++  IVL  + FYAE GGQ 
Sbjct: 451 -----VDTQTEFCGYTGTKGSSSVAAMFVEGNEVDSLSAGDKAIIVLGETPFYAESGGQC 505

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D G I    G F V + Q  G  + H G + EG    + G+EV   VD +RR  I+ NH
Sbjct: 506 GDAGEIRTESGVFRVEDTQKLGNAIAHHGVMAEGV--LAKGDEVATIVDAERRAAISLNH 563

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+L+ ALR++LG+HV QKGS+V P+ LRFDFSH + V    L+ +E +VN QI+   
Sbjct: 564 SATHLLHAALRQLLGEHVTQKGSLVKPDSLRFDFSHLEAVTAAELKEVERLVNSQIRRNH 623

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            V +    +  AK   G  A+FGE Y D VRV+++G                  S ELCG
Sbjct: 624 KVETNVMDIESAKK-KGAMALFGEKYDDEVRVLSMG----------------DFSTELCG 666

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSL 825
           G H S+T +   F + SE GIA GIRRI AVT   A  A EA  +  +E    S  +   
Sbjct: 667 GIHASSTGDIGLFKITSEGGIAAGIRRIEAVTGEGALDAIEAQAAKYEEKLAESAQKAKS 726

Query: 826 LEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKV 885
           LEK +++K + K+A      A + A    +    NG    I+ +E G D   +R  V  +
Sbjct: 727 LEK-EIQKLKDKMA------AAESANIMGKVQDINGTKVLIAALE-GADNKNLRTMVDDI 778

Query: 886 IEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGL 945
             Q G  V++ + +   +K  + AGV +  D   +++  + +    + + G+ G G+  +
Sbjct: 779 KNQVGSGVILLA-NVNDDKIGLIAGVTK--DLIGKVKAGDLVKMVAEQVGGKGG-GRPDM 834

Query: 946 ASGQGTDAAQVTPAM 960
           A   GTD A +  A+
Sbjct: 835 AQAGGTDVAALPAAI 849


>gi|429747051|ref|ZP_19280355.1| alanine--tRNA ligase [Capnocytophaga sp. oral taxon 380 str. F0488]
 gi|429164380|gb|EKY06522.1| alanine--tRNA ligase [Capnocytophaga sp. oral taxon 380 str. F0488]
          Length = 877

 Score =  613 bits (1580), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 353/884 (39%), Positives = 508/884 (57%), Gaps = 74/884 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F KFFE K H    S+P+V  NDPTL+F NAGMNQ+K  FLG A P     K 
Sbjct: 3   SQEIREQFLKFFESKGHTIVPSAPMVVKNDPTLMFTNAGMNQFKEFFLGNAKP-----KY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  +TQKC+R  GKHNDL++VG+DTYHHT FEMLGNWSFGDYFK EAI WAWELLT++Y
Sbjct: 58  KRVADTQKCLRVSGKHNDLEEVGRDTYHHTMFEMLGNWSFGDYFKKEAISWAWELLTEIY 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           ++P + LY T F G E+ G+  D EA DIW + +  + +L    KDNFWEMGD GPCGPC
Sbjct: 118 KIPKENLYVTVFEGSEEDGVPFDQEAYDIWKERIAENHILLGNKKDNFWEMGDQGPCGPC 177

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           +EIH D   + + A      LVNND P  IEIWN VF++FNR++DGSL+ LP+++VDTG+
Sbjct: 178 TEIHVDIRSDEEKAKVPGRDLVNNDHPQVIEIWNNVFMEFNRKADGSLEKLPSRNVDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL  +LQ K SNYDTDVF P+   +++ T +R  SG     + ++V++A RV++DHI
Sbjct: 238 GFERLCMVLQKKQSNYDTDVFTPLIHKVEEITQSRYTSGDRVTPEQEQVNIAIRVISDHI 297

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R ++FAI DG  P N G  YV+RRILRRA+RYG   L  ++ F   LV  +   MG  FP
Sbjct: 298 RAVAFAITDGQLPSNNGAGYVIRRILRRAIRYGFTFLNQKEPFIYKLVETLSNQMGGTFP 357

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLD 474
           EL++++  I  +I  EEASF +TL +G+       Q+  GK LSG  AF L+DTYGFP D
Sbjct: 358 ELEKQQFLIMSVIKEEEASFLRTLEQGLLMLDVMIQNSPGKQLSGGKAFELYDTYGFPKD 417

Query: 475 LTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATD 534
           LT L+  E+GL +D   F   + + +ERSR+A   +A   +              +L  D
Sbjct: 418 LTALILSEKGLTMDEASFEEQLQKQKERSRAAAQIKADDWV--------------ILRDD 463

Query: 535 DSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGL 594
           D  +FI +   ++V++ +      +ES   G    +V  ++ FY E GGQ+ D+G ++  
Sbjct: 464 DEEEFIGYDTLEAVVRLVKYRR--VESQKDGTHFQLVFNTTPFYPEGGGQVGDKGTLQSA 521

Query: 595 FGSF-YVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNF 653
            G   Y+ + +     +IHI          ++ +    +V    R++   NH+ TH+L+ 
Sbjct: 522 NGELIYILDTKKENNLIIHISEHLPT----NLNDPFKAEVHSVGREMAEANHSATHLLHQ 577

Query: 654 ALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEAT 713
           ALREVLG HV+QKGS V PE LRFDFSH   +  E L+++E +VN++I  ++ +      
Sbjct: 578 ALREVLGTHVEQKGSRVAPETLRFDFSHFAKLTEEELKKVEQLVNKRIFEKIPLQEHRNI 637

Query: 714 LAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTR 773
             +    +G  A+FGE Y D VR++  G                  S ELCGGTH+ NT 
Sbjct: 638 PMQQAVESGAMALFGEKYGDRVRMIQFGD-----------------SKELCGGTHVKNTG 680

Query: 774 EAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV-------DDASKIEGSLL 826
           +   F ++SE  +A GIRRI A+T G A K F     L +++        D  K    L 
Sbjct: 681 DIWYFKIISEGAVAAGIRRIEAITRGGAMKYFTEQEQLVEQIKETLKNAQDPVKAITHLQ 740

Query: 827 EKN--------QVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAV 878
           E+N        Q+RK Q K     L+ ++K     AE    NG    + +V+   + A +
Sbjct: 741 EENAALHKELEQLRKEQAK----QLKTSIK-----AEFTEVNGVQCLVKQVDA--EVATL 789

Query: 879 REAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLE 922
           ++   ++  +     + F++     KA++   + ++  ++K L+
Sbjct: 790 KDLAFELGNEVKNAFVFFASAHEEGKALLLCYINKELARAKGLD 833


>gi|116180548|ref|XP_001220123.1| hypothetical protein CHGG_00902 [Chaetomium globosum CBS 148.51]
 gi|88185199|gb|EAQ92667.1| hypothetical protein CHGG_00902 [Chaetomium globosum CBS 148.51]
          Length = 835

 Score =  613 bits (1580), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 340/681 (49%), Positives = 459/681 (67%), Gaps = 16/681 (2%)

Query: 153 MLGNWSFGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF 212
           MLGNWSFGDYFK EAI+W+WELLTKVY L  +RLY TYF G+    L PD EA+ +WL  
Sbjct: 1   MLGNWSFGDYFKKEAIQWSWELLTKVYGLDPNRLYVTYFEGNPDMNLEPDLEAKQLWLDV 60

Query: 213 -LPASRVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVF 271
            +P   +LP   KDNFWEMGD GPCGPCSE+HYD+ G R+AA LVN DDP  +E+WN VF
Sbjct: 61  GVPEDHILPGDMKDNFWEMGDQGPCGPCSEVHYDKVGGRNAAHLVNQDDPLVVEVWNNVF 120

Query: 272 IQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPY 331
           +QF+R+ D SL PLPAKH+DTG+GFERL S LQNK SNY TD+F P+F  IQ+ TGAR Y
Sbjct: 121 MQFDRQKDKSLMPLPAKHIDTGMGFERLVSALQNKTSNYATDIFTPLFARIQEVTGARSY 180

Query: 332 SGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVL 391
           + K G DD D +D AYRV ADHIR LSFAIADG+ P N GR YV+RR+LRR VRY  +  
Sbjct: 181 TDKYGKDDVDGIDTAYRVAADHIRLLSFAIADGAAPNNIGRGYVVRRVLRRGVRYARKYF 240

Query: 392 KAQDG-FFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKK-AA 449
           +A+ G FF+ ++  +V  MG+ FPELK+++  I+EI+  EE +F  TL +G ++F+K AA
Sbjct: 241 QAEIGSFFSSILPALVDQMGEQFPELKKKQEDIKEILDEEEVAFAVTLDRGEKQFEKYAA 300

Query: 450 QDVQG--KVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQ 507
             V+     LSG D + L+DT+GFP DLT+LMAEERGL +D      A ++ARE S++  
Sbjct: 301 LAVKSGENKLSGADVWRLYDTFGFPEDLTKLMAEERGLTIDEAEVEVAREKAREASKAV- 359

Query: 508 NKQAGGAI-VMDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIES---VV 563
            K+A      ++    A L     L   DS       D K  ++ ++TGSEF ++   + 
Sbjct: 360 -KEAVQTFPKLNVHQIAELENTVNLPRPDSEAKYKKGDIKGKVQLVFTGSEFRKTSKELP 418

Query: 564 PGNEVGIVLASSSFYAEQGGQIFDEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAG 621
           P   +G++L  ++FYAE GGQ+ D G   I+G+   F V +VQ +GG+++H G L    G
Sbjct: 419 PKTPLGLLLDKTNFYAESGGQVADTGRILIDGV-AEFKVLDVQEFGGYIVHNGYLE--YG 475

Query: 622 RFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSH 681
             + G+EVIC+ D  RR+ I  NHT TH+LN ALREVLG+ V+QKGS+V  +KLRFDFSH
Sbjct: 476 ELTAGDEVICEYDELRRQPIRNNHTGTHVLNHALREVLGEEVNQKGSLVDQDKLRFDFSH 535

Query: 682 GKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIG 741
              V  E +++IE++ NE I+ +   ++K+  L+ A+ I G+RAVFGE YPDPVRVV++G
Sbjct: 536 KSQVSLEEIKKIEAMSNEDIQRDFKTYAKDVDLSLAREIEGVRAVFGETYPDPVRVVSVG 595

Query: 742 RKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLA 801
             V++LL +P+N EW  +S E CGGTH+ +T   +   ++ E GIAKGIRRI A T   A
Sbjct: 596 VDVDELLKNPKNPEWRKVSVEFCGGTHVDSTGAIKDLIIVEESGIAKGIRRIVAYTGDGA 655

Query: 802 YKAFEAACSLEKEVDDASKIE 822
           ++A   A +  ++++    +E
Sbjct: 656 HQAQRDAKTFSEKLEHIQALE 676


>gi|335043025|ref|ZP_08536052.1| alanyl-tRNA synthetase [Methylophaga aminisulfidivorans MP]
 gi|333789639|gb|EGL55521.1| alanyl-tRNA synthetase [Methylophaga aminisulfidivorans MP]
          Length = 867

 Score =  613 bits (1580), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 374/926 (40%), Positives = 511/926 (55%), Gaps = 84/926 (9%)

Query: 63  VRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRA 122
           +R  F  FF  K H    SSP+VP NDPTLLF NAGM Q+K  FLG      +  K TRA
Sbjct: 7   IRKLFLDFFASKGHEVVASSPLVPANDPTLLFTNAGMVQFKETFLGQ-----ETRKYTRA 61

Query: 123 CNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLP 182
             TQ+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK EAI++AWE LT+   LP
Sbjct: 62  VTTQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIQYAWEFLTETLALP 121

Query: 183 ADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFGCKDNFWEMGDTGPCGPCS 240
           A++L+ T F          D+EA DIWL  +   A R    G KDNFW MGDTGPCGPCS
Sbjct: 122 AEKLWITVF--------EEDDEAADIWLNEIGVSAERFSRIGAKDNFWSMGDTGPCGPCS 173

Query: 241 EIHYDRTGNRDAA--SLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFER 298
           EI YD  G+           D    IEIWN+VF+QFNR +DG+L PLP   VDTG+G ER
Sbjct: 174 EIFYDHGGDVAGGPPGTPEEDGDRYIEIWNLVFMQFNRSADGTLTPLPKPSVDTGMGLER 233

Query: 299 LTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLS 358
           L ++LQ+  +NY+ D+F  +  AIQ+ +G             D  + + RV+ADHIR+ S
Sbjct: 234 LAAVLQHVHNNYEIDLFQHLIQAIQKLSGTE-----------DHTNFSLRVIADHIRSCS 282

Query: 359 FAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQ 418
           F I DG  P NEGR YVLRRI+RRA+R+G + L  +D FF  LV  +V  MG+ FPEL Q
Sbjct: 283 FMITDGVYPSNEGRGYVLRRIIRRAIRHGHK-LGLKDNFFYKLVQPLVDEMGEAFPELAQ 341

Query: 419 REAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQL 478
            +  + + +  EE  F  TL  G++   +A +D+  K + G+  F+L+DTYGFP+DLT  
Sbjct: 342 SQELVEKALQQEETRFADTLDNGLKILDQAIEDMGDKEIPGETVFLLYDTYGFPIDLTAD 401

Query: 479 MAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSFK 538
           +A ERGL +DI GF  AM+  R R+RSA     G   + D            +  D S +
Sbjct: 402 IARERGLTIDIAGFERAMEAQRNRARSASQFSGG---LSDQ-----------ITIDSSTE 447

Query: 539 FIWFQ--DHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFG 596
           F  +    H S I AI    E ++S+  G E  IVL  + FYAE GGQ+ D G I     
Sbjct: 448 FCGYDLTQHDSTILAIIVNGEHVDSISEGQEGLIVLDKTPFYAESGGQVGDHGEINADNA 507

Query: 597 SFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALR 656
           SF V + +       HIG      GRF VG+ V  ++D + R   A NH+ TH+L+ ALR
Sbjct: 508 SFTVSDTRKQSQAFTHIGRCEH--GRFQVGQRVTAQIDENNRLATALNHSATHLLHAALR 565

Query: 657 EVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAE 716
           +VLG+HV QKGS+V P++LRFDFSH +PV P  LR IE +VN+QI+    V ++   + E
Sbjct: 566 KVLGEHVMQKGSLVNPQRLRFDFSHFEPVTPAQLREIERLVNQQIRLNHPVETRLMAIEE 625

Query: 717 AKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAE 776
           AK  +G  A+FGE Y D VRV+++                   S ELCGGTH+  T +  
Sbjct: 626 AKK-SGAMALFGEKYDDEVRVLSMS----------------DFSIELCGGTHVKQTGDIG 668

Query: 777 AFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKNQVRKAQK 836
              + SE GIA G+RRI AVT   A    E   +   +V D  K + + ++    +  Q+
Sbjct: 669 MLKITSEAGIASGVRRIEAVTGEKAIDYIEQMETTLADVSDLLKAKPANVQDKASQLVQR 728

Query: 837 KVAEENLQKAVKVATETAEAAASNGKPFCISRVEV-----------GLDAAAVREAVLKV 885
           +   E   +A+K     A+ A+S G     S  E+           G D  ++R+AV ++
Sbjct: 729 QRELEKELEALK-----AKLASSAGNDLADSATEINGIKVLASTLEGADGKSLRDAVDQL 783

Query: 886 IEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGL 945
             + G  V+   T     K  + AGV +  D + ++   + +      + G+ G G+  +
Sbjct: 784 KNKLGTAVIAL-TAVNDEKITIIAGVTK--DITDKIRAGDLVGHIASQVGGKGG-GRPDM 839

Query: 946 ASGQGTDAAQVTPAMDLAAEFAAMKL 971
           A G G +   +  A+    ++   KL
Sbjct: 840 AQGGGNEPQNLAAALASVPDWVTSKL 865


>gi|315224360|ref|ZP_07866194.1| alanine--tRNA ligase [Capnocytophaga ochracea F0287]
 gi|420159540|ref|ZP_14666339.1| alanine--tRNA ligase [Capnocytophaga ochracea str. Holt 25]
 gi|314945750|gb|EFS97765.1| alanine--tRNA ligase [Capnocytophaga ochracea F0287]
 gi|394761881|gb|EJF44196.1| alanine--tRNA ligase [Capnocytophaga ochracea str. Holt 25]
          Length = 877

 Score =  613 bits (1580), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 353/884 (39%), Positives = 506/884 (57%), Gaps = 74/884 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F KFF+ K H    S+P+V  NDPTL+F NAGMNQ+K  FLG A P     K 
Sbjct: 3   SQEIREQFLKFFKSKGHTIVPSAPMVVKNDPTLMFTNAGMNQFKEFFLGNAKP-----KY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  +TQKC+R  GKHNDL++VG+DTYHHT FEMLGNWSFGDYFK EAI WAWELLT++Y
Sbjct: 58  KRVADTQKCLRVSGKHNDLEEVGRDTYHHTMFEMLGNWSFGDYFKKEAISWAWELLTEIY 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           ++P + LY T F G E+ G+  D EA DIW + +  + +L    KDNFWEMGD GPCGPC
Sbjct: 118 KIPKENLYVTVFEGSEEDGVPFDQEAYDIWKERIAENHILLGNKKDNFWEMGDQGPCGPC 177

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           +EIH D   + + A      LVNND P  IEIWN VF++FNR++DGSL+ LP+++VDTG+
Sbjct: 178 TEIHVDIRSDEEKAKVPGRDLVNNDHPQVIEIWNNVFMEFNRKADGSLEKLPSRNVDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL  +LQ K SNYDTDVF P+   +++ T +R  SG     + ++V++A RV++DHI
Sbjct: 238 GFERLCMVLQKKQSNYDTDVFTPLIHKVEEITQSRYTSGDRVTPEQEQVNIAIRVISDHI 297

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R ++FAI DG  P N G  YV+RRILRRA+RYG   L  ++ F   LV  +   MG  FP
Sbjct: 298 RAVAFAITDGQLPSNNGAGYVIRRILRRAIRYGFTFLNQKEPFIYKLVETLSNQMGGTFP 357

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLD 474
           EL++++  I  +I  EEASF +TL +G+       Q+  GK LSG  AF L+DTYGFP D
Sbjct: 358 ELEKQQFLIMSVIKEEEASFLRTLEQGLLMLDVMIQNSPGKQLSGGKAFELYDTYGFPKD 417

Query: 475 LTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATD 534
           LT L+  E+GL +D   F   + + +ERSR+A   +A   +              +L  D
Sbjct: 418 LTALILSEKGLTMDEASFEEQLQKQKERSRAAAQIKADDWV--------------ILRDD 463

Query: 535 DSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGL 594
           D  +FI +   ++V++ +      +ES   G    +V  ++ FY E GGQ+ D+G ++  
Sbjct: 464 DEEEFIGYDTLEAVVRLVKYRR--VESQKDGTHFQLVFNTTPFYPEGGGQVGDKGTLQSA 521

Query: 595 FGSF-YVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNF 653
            G   Y+ + +     +IHI          ++ +    +V    R++   NH+ TH+L+ 
Sbjct: 522 NGELIYILDTKKENNLIIHISEHLPT----NLNDPFKAEVHSISREMAEANHSATHLLHQ 577

Query: 654 ALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEAT 713
           ALREVLG HV+QKGS V PE LRFDFSH   +  E L+++E +VN +I  ++ +      
Sbjct: 578 ALREVLGTHVEQKGSRVAPETLRFDFSHFAKLTEEELKKVEQLVNRRIFEKIPLQEHRNI 637

Query: 714 LAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTR 773
             +    +G  A+FGE Y D VR++  G                  S ELCGGTH+ NT 
Sbjct: 638 PMQQAVESGAMALFGEKYGDRVRMIQFGD-----------------SKELCGGTHVKNTG 680

Query: 774 EAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV-------DDASKIEGSLL 826
           +   F ++SE  +A GIRRI A+T G A K F     L +++        D  K    L 
Sbjct: 681 DIWYFKIISEGAVAAGIRRIEAITRGGAMKYFTEQEQLVEQIKETLKNAQDPVKAIRHLQ 740

Query: 827 EKN--------QVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAV 878
           E+N        Q+RK Q K     L+ ++K     AE    NG    + +V+   + A +
Sbjct: 741 EENAALHKELEQLRKEQAK----QLKTSIK-----AEFTEVNGVQCLVKQVDA--EVATL 789

Query: 879 REAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLE 922
           ++   ++  +     + F++     KA++   + +   Q+K L+
Sbjct: 790 KDLAFELGNEVKNAFIFFASAHEEGKALLLCYINKDLAQAKGLD 833


>gi|149277763|ref|ZP_01883903.1| alanine--tRNA ligase (alanyl-tRNA synthetase) [Pedobacter sp.
           BAL39]
 gi|149231451|gb|EDM36830.1| alanine--tRNA ligase (alanyl-tRNA synthetase) [Pedobacter sp.
           BAL39]
          Length = 900

 Score =  613 bits (1580), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 367/885 (41%), Positives = 498/885 (56%), Gaps = 102/885 (11%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R  + KFFE K H    S+P+V  NDPTL+F NAGMNQ+K +FLG A       K 
Sbjct: 3   AKEIRQAYLKFFESKQHHIVPSAPIVVKNDPTLMFTNAGMNQFKDLFLGEA-----AIKY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  +TQ+C+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI W+WELLT+VY
Sbjct: 58  PRITDTQRCLRVSGKHNDLEEVGIDTYHHTMFEMLGNWSFGDYFKKEAIAWSWELLTEVY 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           R+P D+LY + F GDEK GL  D EA ++W +F+P  R++    KDNFWEMGDTGPCGPC
Sbjct: 118 RIPKDKLYVSIFEGDEKEGLPRDEEAYELWKQFVPEERIILGNKKDNFWEMGDTGPCGPC 177

Query: 240 SEIHYDRTGNRDAA-----SLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D   + + A     SLVN D P  IEIWN VF+QFNR  DGSL+PLPA+HVDTG+
Sbjct: 178 SEIHVDCRPDDERATVAGKSLVNADHPQVIEIWNNVFMQFNRLKDGSLQPLPAQHVDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL  +LQ K SNYDTDVF P+   I    G        GAD  +K D+A RV+ADHI
Sbjct: 238 GFERLVRVLQEKPSNYDTDVFQPLIQFIASHAGV-----VYGAD--EKTDIAMRVMADHI 290

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R +SF IADG  P N    YV+RRILRRAVRY    L  ++ F N LV ++      VF 
Sbjct: 291 RAISFVIADGQLPSNNKAGYVIRRILRRAVRYAYTFLNLKEPFLNQLVPVLADQFSGVFD 350

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKF----KKAAQDVQGK--------------- 455
           EL  ++  +++++  EE SF +TL  GI++F    KK A  +  +               
Sbjct: 351 ELVLQKDFVQKVVMEEEVSFLRTLATGIQRFENYTKKQADFLMSENAIDTEKPFEHPWVY 410

Query: 456 -------VLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQN 508
                  V+SG  AF L DTYGFP+DLT+LMA E+  ++D++ +N A+ + +ERSR+A  
Sbjct: 411 SILKDQMVISGDFAFELNDTYGFPIDLTELMAREKNWVIDMKEYNTALLKQKERSRAATA 470

Query: 509 KQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEV 568
              G  IV+  D  +       +  DD      F+    VIK     ++  E      + 
Sbjct: 471 IDTGDWIVVHGDLDSEF-----VGYDD------FETETQVIKYRKVNAKGRE------QY 513

Query: 569 GIVLASSSFYAEQGGQIFDEGFIEG---LFGSFYVRNVQIYGGFVIH-IGSLTEGA-GRF 623
            IVL+ + FYAE GGQ+ D G +E    LF S  V + +   G ++H   +L E   G F
Sbjct: 514 QIVLSKTPFYAESGGQVGDTGRLEDHSRLF-SVEVTDTKKENGVIVHYTDTLPEDLDGTF 572

Query: 624 SVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGK 683
                    +D D+R L   NHT TH+L+ AL++VLG HV+QKGS+V PE LRFDFSH  
Sbjct: 573 ------WAVIDEDKRLLSQDNHTATHLLHAALKKVLGTHVNQKGSLVNPEYLRFDFSHFA 626

Query: 684 PVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRK 743
            +  E L  IE +VN++++  + +  +     +    +G+ A+FGE Y + VRV+     
Sbjct: 627 KISEEDLAAIEHLVNQKVRENIPLKEQRDVPYDQAISSGVTALFGEKYGELVRVITFDD- 685

Query: 744 VEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYK 803
                           S ELCGGTH+  T +   F ++SE  +A G+RRI A+T   A +
Sbjct: 686 --------------HYSKELCGGTHVQATGQIGYFKIISESAVAAGVRRIEAITADKA-E 730

Query: 804 AF---------EAACSLEKEVDDASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETA 854
           AF         E    L+   D  + + G L E  +++K  +K     L ++  +  E  
Sbjct: 731 AFILDQNRELNELKALLKGNKDLKAAVSGLLEENARLKKEAEKAM---LAQSADLKNEVI 787

Query: 855 EAAAS-NGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFST 898
           + A   NG  F  + V +     AV+    +V +      +VF+T
Sbjct: 788 KLAKDVNGMNFIATHVVLN-SMDAVKNLAFEVKDLVSNLFLVFTT 831


>gi|374375420|ref|ZP_09633078.1| alanyl-tRNA synthetase [Niabella soli DSM 19437]
 gi|373232260|gb|EHP52055.1| alanyl-tRNA synthetase [Niabella soli DSM 19437]
          Length = 874

 Score =  613 bits (1580), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 374/919 (40%), Positives = 515/919 (56%), Gaps = 71/919 (7%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           +T++R  F  FF+ K H    S+P+V  NDPTL+F NAGMNQ+K  FLG    N Q S  
Sbjct: 4   STEIRQAFLDFFKSKGHEIVPSAPIVVKNDPTLMFTNAGMNQFKDYFLG----NKQ-SPY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  +TQKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI W+WELLT+V 
Sbjct: 59  PRVADTQKCLRVSGKHNDLEEVGVDTYHHTMFEMLGNWSFGDYFKKEAIAWSWELLTEVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           ++P DRLY + F GDEK GL  D EA + W K++   R++    KDNFWEMGDTGPCGPC
Sbjct: 119 KIPKDRLYVSVFEGDEKEGLPFDEEAANEWKKWISEDRIIKGKKKDNFWEMGDTGPCGPC 178

Query: 240 SEIHYD-----RTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D          +  +LVN D P  IEIWN VF+QFNR  DGSL+PLPAKHVDTG+
Sbjct: 179 SEIHVDCRPDAERAQVEGKTLVNADHPQVIEIWNNVFMQFNRLKDGSLQPLPAKHVDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDAD-KVDMAYRVVADH 353
           GFERL  +LQNK SNYDTDVF     AI++ TG +        D +D K  +A+RV+ADH
Sbjct: 239 GFERLVRVLQNKTSNYDTDVFTGTISAIEKITGKK-------YDFSDSKEAIAFRVLADH 291

Query: 354 IRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVF 413
           IR ++F IADG  P N G  YV+RRILRRAVRY    L  +    + LV ++ +    VF
Sbjct: 292 IRAIAFTIADGQLPSNTGAGYVIRRILRRAVRYYYSYLDYKHPLLHQLVPVIAEQFATVF 351

Query: 414 PELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPL 473
            ELKQ++  + ++I  EE SF +TL KG+++     +   G  ++G+DAF L+DTYGFP+
Sbjct: 352 SELKQQQEFVVKVIREEEDSFLRTLEKGLKRIDDILKASSGNQIAGKDAFELYDTYGFPI 411

Query: 474 DLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLAT 533
           DLT+L+A E    VD  GF   M + + RSR+        A  +D +    +H       
Sbjct: 412 DLTRLIASENNTSVDEAGFEAEMQQQKNRSRA--------ATAIDTEDWQPVH------A 457

Query: 534 DDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNE-VGIVLASSSFYAEQGGQIFDEGFIE 592
           +   KF+ ++D     + I    ++ +    G E   +VL ++ FYAE GGQ+ D G + 
Sbjct: 458 EQPSKFVGYEDLNVPTQII----KYRKVKAKGKEQYQLVLETTPFYAESGGQVGDTGTLT 513

Query: 593 GLFG---SFYVRNVQIYGGFVIH-IGSLTEGA-GRFSVGEEVICKVDYDRRKLIAPNHTC 647
                  +  V + +     +IH +  L E   G +S        VD+++R     NHT 
Sbjct: 514 TTQSGEKNIKVLDTKKENDLIIHLVDQLPEPIDGGYS------AVVDFEKRLNTTYNHTA 567

Query: 648 THMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDV 707
           TH+L+ AL++VLG HV+QKGS+V PE LRFD SH   +  E LR++E IVN++I+  + V
Sbjct: 568 THLLHAALKQVLGPHVNQKGSLVSPELLRFDVSHFAKITDEELRKVEMIVNQKIRENIPV 627

Query: 708 FSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGT 767
             KE    EA  + G  A+FGE Y D VRVV I         DP+       S ELCGGT
Sbjct: 628 VIKEMPKEEALKL-GAMALFGEKYGDTVRVVTI---------DPK------FSVELCGGT 671

Query: 768 HLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSL-- 825
           H+  T     F + SE  +A G+RRI A+T   A++      +  K+V +  K    L  
Sbjct: 672 HVPQTGMIGMFLITSEAAVAAGVRRIEALTGPAAFRYLSERVNEYKQVGELLKSANPLKA 731

Query: 826 LEKNQVRKA--QKKVAEENLQKAVKVATETAEAAAS-NGKPFCISRVEVGLDAAAVREAV 882
           +EK    K   +KKV     ++ V +  E  +   + N   F    VEV  +  A+++  
Sbjct: 732 IEKLISDKTTLEKKVERLEAKELVGIRNELLQKDETINQVNFIGGIVEVS-NPDALKKLC 790

Query: 883 LKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGK 942
             +       V+V   +    KA V   + +    +K L+  + +   + PL    G G+
Sbjct: 791 ADLKNHLRDFVIVLGAN-IGGKAAVAVTIADTVVAAKGLDAGQIIKQQVAPLIKGGGGGQ 849

Query: 943 GGLASGQGTDAAQVTPAMD 961
             LA+  G +A  +   ++
Sbjct: 850 KTLATAGGQEAGNLKQVIE 868


>gi|269101880|ref|ZP_06154577.1| alanyl-tRNA synthetase [Photobacterium damselae subsp. damselae CIP
           102761]
 gi|268161778|gb|EEZ40274.1| alanyl-tRNA synthetase [Photobacterium damselae subsp. damselae CIP
           102761]
          Length = 873

 Score =  612 bits (1579), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 369/933 (39%), Positives = 529/933 (56%), Gaps = 89/933 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  +  FFE K H   +SS +VP NDPTLLF NAGMNQ+K +FLG      +    TR
Sbjct: 7   EIRRAYLAFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDVFLGL-----EKRSYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWE LT V  L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKHDAIKYAWEFLTTVLEL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEMGD 232
           P DRL  T +          D+EA +IW K   +PA R++  G         DNFW+MGD
Sbjct: 122 PEDRLLVTIY--------ESDDEAFEIWNKEVGIPADRIVRIGDNKGAPFASDNFWQMGD 173

Query: 233 TGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           TGPCGPC+EI +D      G R        D    IEIWN VF+Q+NR++DG+++PLP  
Sbjct: 174 TGPCGPCTEIFFDHGDHIWGGRPGTP--EEDGDRFIEIWNNVFMQYNRQADGTMEPLPKP 231

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ +I+Q   SNY+ D+F  +          +  +  +G DD    + + R
Sbjct: 232 SVDTGMGIERIAAIMQGVHSNYEIDIFKTLI---------KDAADIIGYDDLS--NQSLR 280

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           VVADHIR+ ++ IADG  P NEGR YVLRRI+RRAVR+G++ L A+  FF  LV  +  V
Sbjct: 281 VVADHIRSCAYLIADGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAKGAFFYKLVGPLADV 339

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    ELK+++  + +++  EE +FG+TL +G+    +A  ++ G +L G+  F L+DT
Sbjct: 340 MGTAGSELKKQQEMVEKVLKIEEENFGRTLDRGLTILNEALDNLDGSILDGETVFKLYDT 399

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP DLT  +A ERG  +D EGF  AM+E R+R+R A         V+  DA       
Sbjct: 400 YGFPADLTNDVARERGFTIDEEGFEAAMEEQRQRARDAGQFGVDYNNVIKVDA------- 452

Query: 529 GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDE 588
                D  FK     D + VI AIY   E ++++  G E  IVL  + FYAE GGQ  D 
Sbjct: 453 -----DTEFKGYEATDGEGVIVAIYRDGEEVDALAAGEEAIIVLDQTPFYAESGGQCGDT 507

Query: 589 GFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
           G +     +F V + Q +G  + H G+LTEGA    VG+++   VD+ RR  I+ NH+ T
Sbjct: 508 GALAAAGVAFTVADTQKFGHAIGHKGTLTEGA--LKVGDKLAATVDHVRRGAISLNHSAT 565

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+++ ALR++LG+HV QKGS+V P+ LRFDFSH + V PE LR +E +VN+QI+      
Sbjct: 566 HLMHAALRKLLGEHVAQKGSLVKPDSLRFDFSHLEAVKPEQLREVERMVNDQIRLN-HAI 624

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
             E    EA    G  A+FGE Y D VRV+++G                  S ELCGG H
Sbjct: 625 DTEIMDIEAAKEKGAMALFGEKYDDQVRVLSMG----------------DFSTELCGGIH 668

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKI----EGS 824
              T +   F ++SE GIA GIRRI AVT   A +A  A    ++++  A+++      S
Sbjct: 669 AKRTGDIGLFKIVSEGGIAAGIRRIEAVTGAAAIEALHAQ---DEQLAKAARLVKSDTAS 725

Query: 825 LLEKNQVRKAQKKVAEENLQK------AVKVATETAEAAASNGKPFCISRVEVGLDAAAV 878
           ++ K +   +  K  E+ +Q+      A + A    +A   NG    I++++ G D  A+
Sbjct: 726 VVNKVEALVSHSKQLEKEIQQLKDKLAAQEGAGLINQAQEINGVKVLIAKLD-GADNKAL 784

Query: 879 REAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRC 938
           R  V ++  Q    ++V   + + +K  + AGV +  D   +++  E +    Q + G+ 
Sbjct: 785 RGMVDELKNQLSSGIVVLG-NVSDDKVGLIAGVTK--DLIGKVKAGELVNMVAQQVGGKG 841

Query: 939 GKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           G G+  +A   GTDA+ +  A++ A  +   +L
Sbjct: 842 G-GRPDMAQAGGTDASALPAALESAKAWIEERL 873


>gi|119356090|ref|YP_910734.1| alanyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
 gi|205830021|sp|A1BD33.1|SYA_CHLPD RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|119353439|gb|ABL64310.1| alanyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
          Length = 888

 Score =  612 bits (1579), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 382/929 (41%), Positives = 526/929 (56%), Gaps = 87/929 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R +F  FF+ K H   +S+PV+P++DPTLLF NAGMNQ+K +FL   D  T+     R
Sbjct: 5   EIRQSFLDFFDRKGHTIVRSAPVIPLDDPTLLFTNAGMNQFKDVFL---DKGTR--PYVR 59

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A +TQKCIRA GKHNDL+DVG+DTYHHTFFEMLGNWSFGDY+K EAI WAWELLT V+ L
Sbjct: 60  AADTQKCIRASGKHNDLEDVGRDTYHHTFFEMLGNWSFGDYYKKEAISWAWELLTSVWHL 119

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPCSE 241
           P +RLYAT +  DE++ L    E        +P   ++ F  KDNFWEMG+TGPCGPCSE
Sbjct: 120 PKERLYATVYYDDEESYLLWQEETD------IPHDHIIKFDEKDNFWEMGETGPCGPCSE 173

Query: 242 IHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTS 301
           IH D T +     LVN  D   IE+WN+VFIQ+NR++DG L+PLP KHVDTG+GFER+ +
Sbjct: 174 IHIDLTEDGSGKPLVNAGDYRVIELWNLVFIQYNRQADGRLEPLPQKHVDTGMGFERVCA 233

Query: 302 ILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAI 361
           ++Q K SNYDTDVF P+FD I + TG   Y+  +     D  D+A RV+ADH RTL+FA+
Sbjct: 234 VMQGKASNYDTDVFRPLFDRITEITGV-SYNASLD----DPSDIAMRVLADHARTLTFAL 288

Query: 362 ADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREA 421
            DG+ P NEGR YVLRRILRRA+RY S+ L   +     LV  +   MGDVFPEL++++ 
Sbjct: 289 TDGAMPSNEGRGYVLRRILRRALRY-SKTLGCSEPLLYRLVETLAASMGDVFPELRKQQQ 347

Query: 422 HIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK---VLSGQDAFILWDTYGFPLDLTQL 478
            +  II AEE SF  TL +GIE F +    V+ +   V+SG DAF L+DT+GFPLDLT+L
Sbjct: 348 AVSRIIRAEEESFLATLDRGIEIFNELIAAVRSRGTTVVSGDDAFRLYDTFGFPLDLTRL 407

Query: 479 MAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSFK 538
           MA E G  VD EGF+  M E + R+R  +  +               H +G     D  +
Sbjct: 408 MAAEAGFEVDEEGFDRCMKEQKTRARQDRRDKQ--------------HLKG-----DEGE 448

Query: 539 FIWFQDHKSVIKAIYTGSEFIESV----VPGNEVGIVLASSSFYAEQGGQIFDEGFIEGL 594
           + WF   ++ +   Y   E + S+    +  + + +VL  + FYAE GGQ  D G+IE  
Sbjct: 449 WTWFSAERTSVFTGYHSLEELASITGVSIFSDRLLVVLDRTPFYAESGGQCGDRGWIETA 508

Query: 595 FGSFYVRNVQIYGGFVIHI-----GSLTEGA---GRFSVGE-EVICKVDYDR--RKLIAP 643
                V + +  G  ++H+      S+++GA      S  E ++ C+   DR  R+    
Sbjct: 509 AYRLRVSDTRKDGDMIVHLVTEVRDSVSDGAISPADLSFDEGKLACRASVDRSDRQGTER 568

Query: 644 NHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKA 703
           NHT TH+L+ ALR  LG HV QKGS V  E+LRFDFSH   +  E L  +ES VNEQI++
Sbjct: 569 NHTATHLLHAALRRTLGQHVQQKGSFVSSERLRFDFSHFARLTSEELAIVESEVNEQIRS 628

Query: 704 ELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAEL 763
              V   +    +     G  A FG+ Y D VRVV I                  +S EL
Sbjct: 629 AEPVVKHQDIPYDEAIARGALAFFGDKYADRVRVVEIA----------------GLSVEL 672

Query: 764 CGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLA-------YKAFEAACSLEKEVD 816
           CGGTH+ +  +   F ++SE  +A G+RRI A+T   A       Y+  +    + K   
Sbjct: 673 CGGTHVDSIGQIGLFKIVSESSVASGVRRIEALTGKAAEVLLWKEYRELQDIRQMLKLKA 732

Query: 817 DASKIEGSLLE----KNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVG 872
           D   I G + E    K ++ K  +    E L   ++ + + AE+  S    F   R+E  
Sbjct: 733 DEEVI-GRIAELADSKKELEKQLQVYRTEALSGILQRSLDAAESVGS--IRFMTLRLE-H 788

Query: 873 LDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQ 932
           +D  ++R+AVL + E+      +  T+E   K  + A   E++     L+  + +  A  
Sbjct: 789 VDQDSLRQAVLALREKDPASTGLLCTEE-DGKVSLTAFAGERAVGEFGLDAGKLVREAAA 847

Query: 933 PLKGRCGKGKGGLASGQGTDAAQVTPAMD 961
            ++G  G GK   A+  G D   +  A D
Sbjct: 848 FVRG-GGGGKPEFATAGGKDPEGIQKAFD 875


>gi|343493959|ref|ZP_08732243.1| alanyl-tRNA synthetase [Vibrio nigripulchritudo ATCC 27043]
 gi|342825600|gb|EGU60077.1| alanyl-tRNA synthetase [Vibrio nigripulchritudo ATCC 27043]
          Length = 860

 Score =  612 bits (1579), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 369/916 (40%), Positives = 518/916 (56%), Gaps = 88/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR+ F KFFE K H    SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRNAFLKFFESKGHQIVDSSSLVPHNDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT+V +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAISFAWEFLTEVLQL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           P DRL  T +          D+EA DIW K   +PA R++  G K        DNFW+MG
Sbjct: 122 PKDRLLVTVY--------ETDDEAFDIWNKKVGVPADRIVRIGDKEGGKPYESDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
           DTGPCGPC+EI YD      G R        D    IEIWN VF+QFNR +DG+++PLP 
Sbjct: 174 DTGPCGPCTEIFYDHGDHIWGGRPGTP--EEDGDRFIEIWNNVFMQFNRHADGTMEPLPK 231

Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
             VDTG+G ER+++I+Q   SNY+ DVF  +  A  + TG    S           + + 
Sbjct: 232 PSVDTGMGIERISAIMQGVHSNYEIDVFQTLIKAAAEVTGHEDLS-----------NQSL 280

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RVVADHIR+ +F I DG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF+ LV ++ +
Sbjct: 281 RVVADHIRSCAFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGAFFHKLVGVLAE 339

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWD 467
           VMG    ELK+++A + +++  EE +FG+TL +G+    +A   ++GKVL G+  F L+D
Sbjct: 340 VMGTAGVELKKQQALVEKVLRIEEENFGRTLERGMSILNEALDGLEGKVLDGETVFKLYD 399

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
           TYGFP DLT  +A ER   +D EGF  AM+  R+R+R A      G    D +A      
Sbjct: 400 TYGFPADLTNDVARERDFAIDEEGFEKAMEAQRQRAREA------GQFGTDYNAA----- 448

Query: 528 RGVLATDDSFKFIWF--QDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
              +  D S +F  +   +  S + A++     +E++  G++  ++L  + FY E GGQ 
Sbjct: 449 ---IKVDASTEFCGYTSTEGSSTVSALFVEGNEVEALSAGDKAIVILEETPFYGESGGQC 505

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D G ++   G F V + Q     V H G L EG   F+ G+ V   VD  RR  I  NH
Sbjct: 506 GDTGTLKTDAGLFQVEDTQKLNNAVAHHGVLVEGV--FAKGDSVAATVDAARRAAIILNH 563

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+L+ ALR VLGDHV QKGS+V  E LRFDFSH + + P  ++ +E +VN  ++   
Sbjct: 564 SATHLLHAALRHVLGDHVAQKGSLVKAEGLRFDFSHLEAMTPAEIKEVERLVNIHVRRNH 623

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
           ++ +    + +AK   G  A+FGE Y D VRV+ +G                  S ELCG
Sbjct: 624 NIQTDIMNIEDAKA-KGAMALFGEKYDDQVRVLTMGE----------------FSTELCG 666

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSL 825
           G H S+T +   F + SE GIA GIRRI AVT   A  A EA  S  +E    +  +   
Sbjct: 667 GIHASSTGDIGLFKITSEGGIAAGIRRIEAVTGEGALDAIEAENSKYEEKLSEAASKAKA 726

Query: 826 LEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKV 885
           LEK +++  + K+A    Q +  + ++  E A   G    +S+++ G D  A+R  V ++
Sbjct: 727 LEK-EIQHLKDKLAS---QASASLTSQVKEIA---GVKVLVSKLD-GADNKALRGMVDEL 778

Query: 886 IEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGL 945
             Q G  +++   +   +K  + AGV +  D + +++  E +    Q + G+ G G+  +
Sbjct: 779 KNQLGSGIIMLG-NVAGDKVGLIAGVTK--DLTGKVKAGELVNMVAQQVGGKGG-GRPDM 834

Query: 946 ASGQGTDAAQVTPAMD 961
           A   GTDA  ++ A+D
Sbjct: 835 AQAGGTDANALSAALD 850


>gi|326336584|ref|ZP_08202753.1| alanine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str. F0234]
 gi|325691249|gb|EGD33219.1| alanine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str. F0234]
          Length = 877

 Score =  612 bits (1579), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 357/881 (40%), Positives = 504/881 (57%), Gaps = 68/881 (7%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R  F KFFE K HV   S+P+V  NDPTL+F NAGMNQ+K  FLG A P     K 
Sbjct: 3   SQEIRQQFLKFFESKGHVIVPSAPMVIKNDPTLMFTNAGMNQFKEYFLGNAKP-----KQ 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  +TQKC+R  GKHNDL++VG+DTYHHT FEMLGNWSFGDYFK EAI WAWELLT+VY
Sbjct: 58  KRVVDTQKCLRVSGKHNDLEEVGRDTYHHTMFEMLGNWSFGDYFKREAISWAWELLTEVY 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           R+P + LY T F G  + G+  D EA DIW + +    +L    KDNFWEMGD GPCGPC
Sbjct: 118 RIPKENLYVTVFEGSPEEGVPLDQEAYDIWKERIAEDHILLGNKKDNFWEMGDQGPCGPC 177

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + A      LVN D P  IEIWN VF++FNR++DGSL+ LPA +VDTG+
Sbjct: 178 SEIHVDIRSEEEKAEIPGRDLVNRDHPQVIEIWNNVFMEFNRKADGSLEKLPAHNVDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL  +LQ K SNYDTDVF P+   +++ T ++  +G     + +++++A RVV+DHI
Sbjct: 238 GFERLCMVLQKKQSNYDTDVFTPLIHKVEEITKSKYSNGTNVTPEQEEINVAIRVVSDHI 297

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R ++FAIADG  P N G  YV+RRILRRA+RYG   L  ++ F   LV  + K MG  FP
Sbjct: 298 RAVAFAIADGQLPSNNGAGYVIRRILRRAIRYGFTFLGQKEPFIYKLVETLSKQMGSTFP 357

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLD 474
           EL++++  I  +I  EEASF +TL +G+       Q+   K LSG  AF L+DTYGFP D
Sbjct: 358 ELEKQQFLIMSVIKEEEASFLRTLEQGLLMLDVMIQNNPDKQLSGSKAFELYDTYGFPKD 417

Query: 475 LTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATD 534
           LT L+  E+G+ +D  GF   + + +ERSR+A   +A   +              +L  D
Sbjct: 418 LTALILSEKGMTLDERGFEENLQKQKERSRAAAQVKADDWV--------------ILRDD 463

Query: 535 DSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGL 594
           +  +FI +   K++++ +      +ES   G    +V  ++ FY E GGQ+ D+G ++  
Sbjct: 464 EEEEFIGYDTLKAIVRLVKYRK--VESQKDGTLYQLVFNTTPFYPEGGGQVGDKGTLQAA 521

Query: 595 FGSF-YVRNVQIYGGFVIHIGS-LTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLN 652
            G   Y+ + +     +IHI   L E     ++ +    +V    R L   NH+ TH+L+
Sbjct: 522 NGELIYILDTKKENNLIIHIAEHLPE-----NLNDPFQAEVASLSRTLAEANHSATHLLH 576

Query: 653 FALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEA 712
            ALREVLG HV+QKGS V PE LRFDFSH   +  E LR++E +VN++I  ++ +     
Sbjct: 577 QALREVLGTHVEQKGSHVAPESLRFDFSHFAKLTQEELRKVERLVNKRIFEKIPLEEHRN 636

Query: 713 TLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNT 772
                   +G  A+FGE Y D VR++  G                  S ELCGGTH+ NT
Sbjct: 637 IPIRQAIESGAMALFGEKYGDHVRMIQFGE-----------------SKELCGGTHVKNT 679

Query: 773 REAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKNQVR 832
            +   F ++SE  +A GIRRI A+T+  A K F    +L         I+ SL    +  
Sbjct: 680 GDIWFFKIISEGAVAAGIRRIEAITSAGALKYFADQEAL------LEGIKASLKNPQEPI 733

Query: 833 KAQKKVAEENLQKAVKV-------ATETAEAAASNGKPF----CISRVEVGLDAAAVREA 881
           K+   + EEN Q   ++       A +  E       P     C+++ ++ LD A +++ 
Sbjct: 734 KSIINLQEENAQLHKEIEQLKREQAKQLKEGLKKEFIPINGIQCLTK-QLNLDLATLKDL 792

Query: 882 VLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLE 922
              + E+     ++F T +   KA++   + ++  +SK L+
Sbjct: 793 AFMLGEEVKDAFILFGTVQEGGKAMLLCYINKELTKSKSLD 833


>gi|83596048|gb|ABC25406.1| alanyl-tRNA synthetase [uncultured marine bacterium Ant39E11]
          Length = 868

 Score =  612 bits (1578), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 350/853 (41%), Positives = 500/853 (58%), Gaps = 68/853 (7%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A+++R  F  FF +K H    S+P+V  +D +L+F NAGMN +K IF G A P +     
Sbjct: 3   ASQIRQAFLNFFANKGHTIVHSAPLVTKDDSSLMFVNAGMNPFKDIFTG-AKPASH---- 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI+WAWELLT VY
Sbjct: 58  SRVADSQKCLRVSGKHNDLEEVGIDTYHHTLFEMLGNWSFGDYFKQEAIDWAWELLTDVY 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +L  +RLY T F GD+  GLA D+EA+  WLK LPA R+L     DNFWEMG+TGPCGPC
Sbjct: 118 QLDPERLYVTIFEGDKGDGLALDDEAKSHWLKHLPADRILNGNKSDNFWEMGETGPCGPC 177

Query: 240 SEIHYD-----RTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D         +D A+LVN D P  IE+WN+VF+Q+ R +DGSL  LP++HVDTG+
Sbjct: 178 SEIHIDLRPEKERKQKDGATLVNMDHPQVIEVWNLVFMQYQRMADGSLVDLPSQHVDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   ++ K SNYDTDVF P    ++  +G R Y    G D++  VD+A RV+ADH+
Sbjct: 238 GFERLVRAIEGKSSNYDTDVFAPYIQRLESMSG-RTY----GKDES--VDVAMRVIADHV 290

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R + FAIADG  P N G  YV+RRILRRAVRYG  VL+ ++ F   LV  +V+ MG  FP
Sbjct: 291 RAVGFAIADGQLPSNTGAGYVIRRILRRAVRYGYSVLQFKEPFIARLVPDMVENMGKAFP 350

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLD 474
           ELK ++  + ++I  EE +F +TL  G+++   A +  +GK L G+  F L+DTYGFPLD
Sbjct: 351 ELKAQQTLMTQVIEEEEQAFLRTLASGLKRLDAAMK--EGKPLMGKQCFELYDTYGFPLD 408

Query: 475 LTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATD 534
           LT L+ +E+G+++D +GF+ AM E + RS+ A  ++ G  +               +A  
Sbjct: 409 LTALICKEKGIVLDEKGFHEAMAEQKGRSKVAGAQKVGDWV--------------EVAPG 454

Query: 535 DSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGL 594
              +F+ +  + +  K +        S   G+   +V+  + FY E GGQ+ D G++   
Sbjct: 455 IGDQFVGYDQYTTESKLLRYRK---VSNAKGDFTQVVIQPTPFYPEGGGQVGDRGWLIMG 511

Query: 595 FGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFA 654
                V N     G ++H+ ++       +V       +D  +RK  A NH+ TH+L+ A
Sbjct: 512 KDRIEVLNCSSEAGAILHLVAIMPAKPTAAVK----AVIDEGKRKASAQNHSATHLLHKA 567

Query: 655 LREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE--LDVFSKEA 712
           LR++LG HV+Q+GS V  E LRFDFSH + +  + L  IES V+  I  +  L  F +E+
Sbjct: 568 LRDILGVHVEQRGSFVSDEYLRFDFSHFQRIAAKELMAIESHVSTAILQDHPLQEF-RES 626

Query: 713 TLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNT 772
           T+ EAK   G  A+FGE Y D VRV+ +G  V                 ELCGGTH+S T
Sbjct: 627 TMEEAKA-KGAMALFGEKYGDSVRVIQLGDSV-----------------ELCGGTHVSTT 668

Query: 773 REAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK----IEGSLLEK 828
                F ++SE  +A GIRRI A+    A    + A   ++ + + +K    +E     K
Sbjct: 669 AALSPFVIVSESSVAAGIRRIEALAGHSAAIYLKQAQQSQQAILEVTKGQDPLEAMESMK 728

Query: 829 NQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQ 888
            ++   QK +      +A  + TE  ++A + G P+ +    V LDAA+ ++    +++Q
Sbjct: 729 KELSAMQKALKSYQSAQAGDLKTELLQSAKAIG-PYNMMAAAVDLDAASAKDLAFALVKQ 787

Query: 889 --KGMPVMVFSTD 899
             K + ++  S D
Sbjct: 788 DPKSVVLLALSND 800


>gi|189463200|ref|ZP_03011985.1| hypothetical protein BACCOP_03913 [Bacteroides coprocola DSM 17136]
 gi|189430179|gb|EDU99163.1| alanine--tRNA ligase [Bacteroides coprocola DSM 17136]
          Length = 872

 Score =  612 bits (1578), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 346/812 (42%), Positives = 467/812 (57%), Gaps = 69/812 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++RD+F KFFE K H    S+P+V  +DPTL+F NAGMNQ+K I LG        +K 
Sbjct: 4   ANEIRDSFVKFFESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGN-----HPAKY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WA+E L  V 
Sbjct: 59  KRVTDSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAYEYLVSVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +L    LY T F G    G++ D+EA   W +F P   ++     DNFWEMGDTGPCGPC
Sbjct: 119 KLDPKDLYVTVFEGSPSEGISRDDEAAGYWGQFFPEDHIINGNKHDNFWEMGDTGPCGPC 178

Query: 240 SEIHYD-RTGNRDAA----SLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D R+    AA     LVN D P  IEIWN+VF+Q+NR++DG+L+PLPAK +DTG+
Sbjct: 179 SEIHIDSRSAEEKAAVPGRELVNKDHPQVIEIWNLVFMQYNRKADGTLEPLPAKVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF PI  AI         SGK   DD +KVD+  RVVADHI
Sbjct: 239 GFERLVRTLQGKTSNYDTDVFQPIIKAIGD------LSGKKYGDD-EKVDVTMRVVADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++F+I DG  P N    YV+RRILRRAVRY    L  +  F   L+ ++++ MG  +P
Sbjct: 292 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYAYTFLGQKQAFMYKLLPVLIENMGGAYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ--GKV-LSGQDAFILWDTYGF 471
           ELK ++A I +++  EE SF +TL  GI    K   + +  GK  +SG DAF L+DT+GF
Sbjct: 352 ELKAQQALIEKVMKEEEESFLRTLETGIRLLDKTMAETKAAGKTEISGVDAFTLYDTFGF 411

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           P DLT+L+  E GL  D++GF   M + +ER+R+A   + G  + +    T  +   G  
Sbjct: 412 PFDLTELILRENGLTADVKGFEAEMQKQKERARNAAAVETGDWVTLKEGETTFV---GYD 468

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            T+     + ++  K   + +Y                IVL+ + FYAE GGQI D G +
Sbjct: 469 YTEYETSILRYRQIKQKNQTLYQ---------------IVLSDTPFYAESGGQIGDTGVL 513

Query: 592 EGLFGSFYVRNVQIYGGFVIHIG-SLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHM 650
              F +  + + +      IHI   L E      +   ++  VD D+R   A NH+CTH+
Sbjct: 514 VSEFETIDIIDTKKENNLPIHIAKKLPE-----HLEAPMMACVDTDKRAACAANHSCTHL 568

Query: 651 LNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSK 710
           L+ ALR+VLG HV+QKGS+V P+ LRFDFSH + V PE +R +E +VN +I+  + +   
Sbjct: 569 LDEALRQVLGAHVEQKGSLVTPDSLRFDFSHFQKVTPEQIREVEHLVNAKIRENVPLTEY 628

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
                E     G  A+FGE Y D VRVV  G                  S E CGGTH+S
Sbjct: 629 RNLPIEKAKELGAIALFGEKYGDEVRVVQFGS-----------------SIEFCGGTHVS 671

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKNQ 830
            T +     ++SE  +A GIRRI AVT     + F+   +++  ++D   ++        
Sbjct: 672 ATGKIGMVKIISESSVAAGIRRIEAVTGAKVEEMFD---TVQDAIND---LKALFNNAPD 725

Query: 831 VRKAQKKVAEEN--LQKAVKVATETAEAAASN 860
           ++ A  K  EEN  L+K ++   +  EAA  N
Sbjct: 726 LKAAISKYIEENAGLKKQMEEFMKEKEAAVKN 757


>gi|375266642|ref|YP_005024085.1| alanyl-tRNA synthetase [Vibrio sp. EJY3]
 gi|369841962|gb|AEX23106.1| alanyl-tRNA synthetase [Vibrio sp. EJY3]
          Length = 860

 Score =  612 bits (1577), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 371/915 (40%), Positives = 517/915 (56%), Gaps = 88/915 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR++F KFFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRNSFLKFFESKGHQIVESSSLVPHNDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT+V +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAISFAWEFLTQVLKL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           P +RL  T +          D+EA DIW +   +PA R++  G K        DNFW+MG
Sbjct: 122 PQERLLVTIY--------ETDDEAFDIWNQKVGVPADRIIRIGDKKGGKPYESDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
           DTGPCGPC+EI YD      G R        D    IEIWN VF+QFNR +DG+++PLP 
Sbjct: 174 DTGPCGPCTEIFYDHGEHIWGGRPGTP--EEDGDRFIEIWNNVFMQFNRHADGTMEPLPK 231

Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
             VDTG+G ER+++I+Q   SNY+ DVF  +  A  +  G    S           + + 
Sbjct: 232 PSVDTGMGIERISAIMQGVHSNYEIDVFQTLIKAAAEVVGYEDLS-----------NQSL 280

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RV+ADHIR+ SF I DG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF  LV ++ +
Sbjct: 281 RVIADHIRSCSFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGVFFYKLVGVLAE 339

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWD 467
           VMG    ELK+++A + +++  EE +FG+TL +G+    +A  ++ GK L G+  F L+D
Sbjct: 340 VMGTAGEELKRQQAVVEKVLRIEEENFGRTLDRGMSILNEALDNLDGKELDGETVFKLYD 399

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
           TYGFP DLT  +A ER   +D EGF  AM+E R+R+R A      G    D +AT     
Sbjct: 400 TYGFPADLTNDVAREREFTIDEEGFEKAMEEQRQRAREA------GQFGTDYNAT----- 448

Query: 528 RGVLATDDSFKFIWFQDHK--SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
              +  D   +F  +   K  S ++A++     +ES+  G++  IVL  + FYAE GGQ 
Sbjct: 449 ---IKVDAETEFCGYTGTKGSSSVEAMFVEGNEVESLSAGDKAIIVLGETPFYAESGGQC 505

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D G I    G F V + Q  G  + H G + EG    + G++V   VD +RR   + NH
Sbjct: 506 GDAGEIRTESGVFRVEDTQKLGNAIAHYGVMAEGV--LAKGDDVATIVDAERRAATSLNH 563

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+L+ ALR VLG+HV QKGS+V PE LRFDFSH + V    L+ +E +VN QI+   
Sbjct: 564 SATHLLHEALRRVLGEHVLQKGSLVRPENLRFDFSHLEAVTAAELKEVERLVNAQIRRNH 623

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    +  AK   G  A+FGE Y D VRV+++G                  S ELCG
Sbjct: 624 SIETNIMDIESAKQ-KGAMALFGEKYDDEVRVLSMG----------------DFSTELCG 666

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSL 825
           G H S+T +   F + SE GIA GIRRI AVT   A    EA  +  +E    S  +   
Sbjct: 667 GIHASSTGDIGLFKITSESGIAAGIRRIEAVTGEAALDVIEAQTAKYEEKLAESAQKSKA 726

Query: 826 LEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKV 885
           LEK +++K + K+A      A + A    +A   NG    ++ +E G D+  +R  V  +
Sbjct: 727 LEK-EIQKLKDKMA------AAESANIMGKAVEVNGTKVLVAALE-GADSKNLRTMVDDI 778

Query: 886 IEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGL 945
             Q G  V++ + + T +K  + AGV +  D   +++  + +    + + G+ G G+  +
Sbjct: 779 KNQMGSGVVLLA-NITGDKVGLIAGVTK--DLVGKVKAGDLVKMVAEQVGGKGG-GRPDM 834

Query: 946 ASGQGTDAAQVTPAM 960
           A   GTD A +  A+
Sbjct: 835 AQAGGTDVAALPEAI 849


>gi|269960382|ref|ZP_06174755.1| alanyl-tRNA synthetase [Vibrio harveyi 1DA3]
 gi|269834809|gb|EEZ88895.1| alanyl-tRNA synthetase [Vibrio harveyi 1DA3]
          Length = 860

 Score =  612 bits (1577), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 373/915 (40%), Positives = 514/915 (56%), Gaps = 88/915 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR+ F KFFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRNAFLKFFESKGHQIVESSSLVPHNDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT   +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIAFAWEFLTVTLKL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           PADRL  T +          D+EA DIW +   +PA R++  G K        DNFW+MG
Sbjct: 122 PADRLLVTVY--------ETDDEAFDIWNQKVGVPADRIIRIGDKKGGKPYESDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
           DTGPCGPC+EI YD      G R        D    IEIWN VF+QFNR +DG+++PLP 
Sbjct: 174 DTGPCGPCTEIFYDHGEHIWGGRPGTP--EEDGDRFIEIWNNVFMQFNRHADGTMEPLPK 231

Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
             VDTG+G ER+++I+Q   SNY+ DVF  +  A  +  G    S           + + 
Sbjct: 232 PSVDTGMGIERISAIMQGVHSNYEIDVFQALIKAAAEVIGYEDLS-----------NQSL 280

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RV+ADHIR+ SF I DG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF+ LV ++ +
Sbjct: 281 RVIADHIRSCSFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGAFFHKLVGVLAE 339

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWD 467
           +MG    ELK+++A + +++  EE +FG+TL +G+    +A  ++ GKVL G+  F L+D
Sbjct: 340 IMGTAGEELKRQQAVVEKVLRIEEENFGRTLERGMAILNEALDNLDGKVLDGETVFKLYD 399

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
           TYGFP DLT  +A ER   +D EGF  AM+E R+R+R A N           D  AA+  
Sbjct: 400 TYGFPADLTNDVAREREFAIDEEGFEKAMEEQRQRAREAGN--------FGTDYNAAIK- 450

Query: 528 RGVLATDDSFKFIWFQDHK--SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
                 D   +F  +   K  S + A++     +ES+  G++  IVL  + FYAE GGQ 
Sbjct: 451 -----VDTQTEFCGYTGTKGSSSVAAMFVEGNEVESLSAGDKAIIVLGETPFYAESGGQC 505

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D G I    G F V + Q  G  + H G + EG    + G+EV   VD +RR  I+ NH
Sbjct: 506 GDAGEIRTEAGVFRVEDTQKLGNAIAHHGVMAEGV--LAKGDEVATIVDAERRAAISLNH 563

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+L+ ALR+VLG+HV QKGS+V  + LRFDFSH + V    L+ +E +VN QI+   
Sbjct: 564 SATHLLHAALRQVLGEHVTQKGSLVKADSLRFDFSHLEAVTAAELKEVERLVNAQIRRNH 623

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    +  AK   G  A+FGE Y D VRV+++G                  S ELCG
Sbjct: 624 TIETNVMDIESAKK-KGAMALFGEKYDDEVRVLSMG----------------DFSTELCG 666

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSL 825
           G H SNT +   F + SE GIA GIRRI AVT   A  A EA  +  +E    S  +   
Sbjct: 667 GIHASNTGDIGLFKITSEGGIAAGIRRIEAVTGEGALDAIEAQAAKYEEKLAESAQKAKS 726

Query: 826 LEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKV 885
           LEK +++K + K+A      A + A    +    NG    I+ +E G D   +R  V  +
Sbjct: 727 LEK-EIQKLKDKMA------AAESANIMGKVQDINGTKVLIAALE-GADNKNLRTMVDDI 778

Query: 886 IEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGL 945
             Q G  V++ + +   +K  + AGV +  D   +++  + +    + + G+ G G+  +
Sbjct: 779 KNQVGSGVILLA-NVNDDKIGLIAGVTK--DLIGKVKAGDLVKMVAEQVGGKGG-GRPDM 834

Query: 946 ASGQGTDAAQVTPAM 960
           A   GTD A +  A+
Sbjct: 835 AQAGGTDVAALPAAI 849


>gi|424047689|ref|ZP_17785247.1| alanine--tRNA ligase [Vibrio cholerae HENC-03]
 gi|408883653|gb|EKM22432.1| alanine--tRNA ligase [Vibrio cholerae HENC-03]
          Length = 860

 Score =  611 bits (1576), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 373/915 (40%), Positives = 515/915 (56%), Gaps = 88/915 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR+ F KFFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRNAFLKFFESKGHQIVESSSLVPHNDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT   +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIAFAWEFLTVTLKL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           PADRL  T +          D+EA DIW +   +PA R++  G K        DNFW+MG
Sbjct: 122 PADRLLVTVY--------ETDDEAFDIWNQKVGVPADRIIRIGDKKGGKPYESDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
           DTGPCGPC+EI YD      G R        D    IEIWN VF+QFNR +DG+++PLP 
Sbjct: 174 DTGPCGPCTEIFYDHGEHIWGGRPGTP--EEDGDRFIEIWNNVFMQFNRHADGTMEPLPK 231

Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
             VDTG+G ER+++I+Q   SNY+ DVF  +  A  +  G    S           + + 
Sbjct: 232 PSVDTGMGIERISAIMQGVHSNYEIDVFQALIKAAAEVIGYEDLS-----------NQSL 280

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RV+ADHIR+ SF I DG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF+ LV+++ +
Sbjct: 281 RVIADHIRSCSFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGAFFHKLVSVLAE 339

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWD 467
           +MG    ELK+++A + +++  EE +FG+TL +G+    +A  ++ GKVL G+  F L+D
Sbjct: 340 IMGTAGEELKRQQAVVEKVLRIEEENFGRTLERGMAILNEALDNLDGKVLDGETVFKLYD 399

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
           TYGFP DLT  +A ER   +D EGF  AM+E R+R+R A N           D  AA+  
Sbjct: 400 TYGFPADLTNDVAREREFAIDEEGFEKAMEEQRQRAREAGN--------FGTDYNAAIK- 450

Query: 528 RGVLATDDSFKFIWFQDHK--SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
                 D   +F  +   K  S + A++     +ES+  G++  IVL  + FYAE GGQ 
Sbjct: 451 -----VDTQTEFCGYTGTKGSSSVAAMFVEGNEVESLSAGDKAIIVLGETPFYAESGGQC 505

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D G I    G F V + Q  G  + H G + EG    + G+EV   VD +RR  I+ NH
Sbjct: 506 GDAGEIRTEAGVFRVEDTQKLGNAIAHHGVMAEGV--LAKGDEVATIVDAERRAAISLNH 563

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+L+ ALR+VLG+HV QKGS+V  + LRFDFSH + V    L+ +E +VN QI+   
Sbjct: 564 SATHLLHAALRQVLGEHVTQKGSLVKADSLRFDFSHLEAVTAAELKEVERLVNAQIRRNH 623

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    +  AK   G  A+FGE Y D VRV+++G                  S ELCG
Sbjct: 624 TIETNVMDIESAKK-KGAMALFGEKYDDEVRVLSMG----------------DFSTELCG 666

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSL 825
           G H SNT +   F + SE GIA GIRRI AVT   A  A EA  +  +E    S  +   
Sbjct: 667 GIHASNTGDIGLFKITSEGGIAAGIRRIEAVTGEGALDAIEAQAAKYEEKLAESAQKAKS 726

Query: 826 LEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKV 885
           LEK +++K + K+A      A + A    +    NG    I+ +E G D   +R  V  +
Sbjct: 727 LEK-EIQKLKDKMA------AAESANIMGKVQDINGTKVLIAALE-GADNKNLRTMVDDI 778

Query: 886 IEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGL 945
             Q G  V++ + +   +K  + AGV +  D   +++  + +    + + G+ G G+  +
Sbjct: 779 KNQVGSGVILLA-NVNDDKIGLIAGVTK--DLIGKVKAGDLVKMVAEQVGGKGG-GRPDM 834

Query: 946 ASGQGTDAAQVTPAM 960
           A   GTD A +  A+
Sbjct: 835 AQAGGTDVAALPAAI 849


>gi|429755696|ref|ZP_19288332.1| alanine--tRNA ligase [Capnocytophaga sp. oral taxon 324 str. F0483]
 gi|429173332|gb|EKY14861.1| alanine--tRNA ligase [Capnocytophaga sp. oral taxon 324 str. F0483]
          Length = 877

 Score =  611 bits (1576), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 348/876 (39%), Positives = 505/876 (57%), Gaps = 58/876 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F KFFE K H    S+P+V  NDPTL+F NAGMNQ+K  FLG A P     K 
Sbjct: 3   SQEIREQFLKFFESKGHTIVPSAPMVVKNDPTLMFTNAGMNQFKEFFLGNAKP-----KY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  +TQKC+R  GKHNDL++VG+DTYHHT FEMLGNWSFGDYFK EAI WAWELLT++Y
Sbjct: 58  KRVADTQKCLRVSGKHNDLEEVGRDTYHHTMFEMLGNWSFGDYFKKEAISWAWELLTEIY 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           ++P + LY T F G E+ G+  D EA DIW + +  + +L    KDNFWEMGD GPCGPC
Sbjct: 118 KIPKENLYVTVFEGSEEDGVPFDQEAYDIWKERIAENHILLGNKKDNFWEMGDQGPCGPC 177

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           +EIH D   + + A      LVNND P  IEIWN VF++FNR++DGSL+ LP+++VDTG+
Sbjct: 178 TEIHVDIRSDEEKAKVPGRDLVNNDHPQVIEIWNNVFMEFNRKADGSLEKLPSRNVDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL  +LQ K SNYDTDVF P+   +++ T +R  SG     + ++V++A RV++DHI
Sbjct: 238 GFERLCMVLQKKQSNYDTDVFTPLIHKVEEITQSRYTSGDRVTPEQEEVNIAIRVISDHI 297

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R ++FAI DG  P N G  YV+RRILRRA+RYG   L  ++ F   LV  +   MG  FP
Sbjct: 298 RAVAFAITDGQLPSNNGAGYVIRRILRRAIRYGFTFLNQKEPFIYKLVETLSNQMGGTFP 357

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLD 474
           EL++++  I  +I  EEASF +TL +G+       Q+  GK LSG  AF L+DTYGFP D
Sbjct: 358 ELEKQQFLIMSVIKEEEASFLRTLEQGLLMLDVMIQNSPGKQLSGGKAFELYDTYGFPKD 417

Query: 475 LTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATD 534
           LT L+  E+GL +D   F   + + +ERSR+A   +A   +              +L  D
Sbjct: 418 LTALILSEKGLTMDEASFEEQLQKQKERSRAAAQIKADDWV--------------ILRDD 463

Query: 535 DSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGL 594
           D  +FI +   ++V++ +      +ES   G    +V  ++ FY E GGQ+ D+G ++  
Sbjct: 464 DEEEFIGYDTLEAVVRLVKYRR--VESQKDGTHFQLVFNTTPFYPEGGGQVGDKGTLQSA 521

Query: 595 FGSF-YVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNF 653
            G   Y+ + +     +IHI          ++ +    +V    R++   NH+ TH+L+ 
Sbjct: 522 NGELIYILDTKKENNLIIHISEHLPT----NLNDPFKAEVHSISREMAEANHSATHLLHQ 577

Query: 654 ALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEAT 713
           ALREVLG HV+QKGS V PE LRFDFSH   +  E L+++E +VN++I  ++ +      
Sbjct: 578 ALREVLGTHVEQKGSRVAPETLRFDFSHFAKLTEEELKKVEQLVNKRIFEKIPLQEHRNI 637

Query: 714 LAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTR 773
             +    +G  A+FGE Y D VR++  G                  S ELCGGTH+ NT 
Sbjct: 638 PMQQAVESGAMALFGEKYGDRVRMIQFGD-----------------SKELCGGTHVKNTG 680

Query: 774 EAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV-------DDASKIEGSLL 826
           +   F ++SE  +A GIRRI A+T G A   F     L +++        D  K    L 
Sbjct: 681 DIWYFKIISEGAVAAGIRRIEAITRGGAMMYFTEQEQLVEQIKETLKNAQDPVKAIRHLQ 740

Query: 827 EKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVI 886
           E+N     + +  ++   K +K + + AE    NG    + +V+   + A +++   ++ 
Sbjct: 741 EENAALHKELEQLKKEQAKQLKTSIK-AEFTEVNGVQCLVKQVDA--EVATLKDLAFELG 797

Query: 887 EQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLE 922
            +     + F++     KA++   + ++  Q+K L+
Sbjct: 798 NEVKNAFVFFASAHEEGKALLLCYINKELAQAKGLD 833


>gi|228471913|ref|ZP_04056683.1| alanine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
 gi|228276765|gb|EEK15471.1| alanine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
          Length = 877

 Score =  611 bits (1575), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 360/880 (40%), Positives = 501/880 (56%), Gaps = 66/880 (7%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F KFFE K HV   S+P+V  NDPTL+F NAGMNQ+K  FLG A P     K 
Sbjct: 3   SQEIRELFLKFFESKGHVIVPSAPMVIKNDPTLMFTNAGMNQFKEFFLGNAKP-----KQ 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  +TQKC+R  GKHNDL++VG+DTYHHT FEMLGNWSFGDYFK EAI WAWELLT+VY
Sbjct: 58  KRVVDTQKCLRVSGKHNDLEEVGRDTYHHTMFEMLGNWSFGDYFKREAITWAWELLTEVY 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           ++P + LY T F G  + G+  D EA DIW + +    +L    KDNFWEMGD GPCGPC
Sbjct: 118 KIPKENLYVTVFEGSPEEGVPFDQEAYDIWKERIAEDHILLGNKKDNFWEMGDQGPCGPC 177

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D   + + A      LVNND P  IEIWN VF++FNR++DGSL+ LPA++VDTG+
Sbjct: 178 SEIHVDIRSDGEKAKVAGRDLVNNDHPQVIEIWNNVFMEFNRKADGSLEKLPAQNVDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL  +LQ K SNYDTDVF P+   +++ T  R  +G     + +++++A RV++DHI
Sbjct: 238 GFERLCMVLQGKQSNYDTDVFTPLIHKVEEITKTRYTNGIQLTPEQEQINIAIRVISDHI 297

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R +SFAIADG  P N G  YV+RRILRRA+RYG   L  ++ F   LV  + K MG  FP
Sbjct: 298 RAVSFAIADGQLPSNNGAGYVIRRILRRAIRYGFTFLGQKEPFIYKLVETLTKQMGGTFP 357

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLD 474
           EL++    I  +I  EEASF +TL +G+       Q+   K LSG  AF L+DTYGFP D
Sbjct: 358 ELEKEFLLIVSVIKEEEASFLRTLEQGLLMLDVMIQNASDKQLSGSKAFELYDTYGFPKD 417

Query: 475 LTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATD 534
           LT L+  ERG+ +D   F   + + +ERSR+A   +AG  +              VL  D
Sbjct: 418 LTALILSERGMTLDEASFEEHLQKQKERSRAAAQVKAGDWV--------------VLRDD 463

Query: 535 DSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGL 594
           +  +FI +   +++++ +      +ES   G    +V  ++ FY E GGQ+ D G ++  
Sbjct: 464 EEEEFIGYDTLEAMVRLVKYRK--VESQKDGTLYQLVFNTTPFYPEGGGQVGDRGTLQAA 521

Query: 595 FGSF-YVRNVQIYGGFVIHIGS-LTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLN 652
            G   Y+ + +     +IHI   L E     ++ +    +V    R L   NH+ TH+L+
Sbjct: 522 NGELIYITDTKKENNLIIHIAEHLPE-----NLNDPFKAEVHPMGRALAQSNHSATHLLH 576

Query: 653 FALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEA 712
            ALREVLG HV+QKGS V PE LRFDFSH   + PE L  +E +VN++I  ++ +     
Sbjct: 577 QALREVLGTHVEQKGSHVSPEALRFDFSHFAKLTPEELTEVERLVNKRIYEKIPLEEHRN 636

Query: 713 TLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNT 772
              +     G  A+FGE Y + VR++  G                  S ELCGGTH+ NT
Sbjct: 637 IPIQQALEAGAMALFGEKYGEKVRMIQFGE-----------------SRELCGGTHVKNT 679

Query: 773 REAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKNQVR 832
            +   F ++SE  +A G+RRI A+T   A K F     L +E      I+GSL       
Sbjct: 680 GDIWFFKIVSEGAVAAGVRRIEAITNAGALKHFLLQEKLLEE------IKGSLKNPQDPI 733

Query: 833 KAQKKVAEENLQKAVKVATETAEAAAS-----NGKPFCISRVE-----VGLDAAAVREAV 882
           K+   + EEN +   ++     E A        G+   IS V+     + LD A +++  
Sbjct: 734 KSITNLQEENARLHKELEQLKREQAKQLKGELKGEFVTISGVQCLTKRLDLDIATLKDLA 793

Query: 883 LKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLE 922
             + E+     ++F   +   KA++   + ++  QSK L+
Sbjct: 794 FMLGEEVKDAFILFGATQEDGKALLLCYINKELTQSKGLD 833


>gi|371775799|ref|ZP_09482121.1| alanyl-tRNA synthetase [Anaerophaga sp. HS1]
          Length = 878

 Score =  610 bits (1574), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 334/795 (42%), Positives = 466/795 (58%), Gaps = 68/795 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A +VR  FF FF    HV   S+P+V  NDPTL+F NAGMNQ+K IFLG   P       
Sbjct: 3   AKEVRQKFFDFFRANQHVIVPSAPMVLKNDPTLMFTNAGMNQFKDIFLGNHKPEH----- 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  N QKC+R  GKHNDL++VG+D+YHHT FEMLGNWSFGDYFK +AI+ AW  LT+  
Sbjct: 58  LRVANAQKCLRVSGKHNDLEEVGRDSYHHTMFEMLGNWSFGDYFKEKAIDLAWTFLTREL 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
            +   RLYAT F GD+   LA D+EA   W K+LP   ++    KDNFWEMGDTGPCGPC
Sbjct: 118 GIDKSRLYATIFEGDDTDKLARDDEAATAWAKYLPEKHIINGSKKDNFWEMGDTGPCGPC 177

Query: 240 SEIHYD-----RTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     +  ++    LVN D P  IEIWN+VFIQ+NR++DG+L PLP KH+DTG+
Sbjct: 178 SEIHIDLRDEYQRKSQPGYELVNKDHPEVIEIWNLVFIQYNRKADGTLIPLPQKHIDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL  +LQ K SNYDTD+F P+   I   +G      + GA  +D+ D+A RV+ADHI
Sbjct: 238 GFERLCRVLQGKKSNYDTDIFQPVIRQISSISGV-----EYGA--SDETDIAMRVIADHI 290

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++F+I DG  P N    YV+RRILRRAVRYG   L     F +GL+  +++ MG+ +P
Sbjct: 291 RTIAFSITDGQLPSNNKAGYVIRRILRRAVRYGYTFLNMNRPFMSGLLPALIETMGEAYP 350

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG---KVLSGQDAFILWDTYGF 471
           ELK ++  I ++I  EE SF KTL  GI    +  +D+ G   KV+SG+ AF L+DTYGF
Sbjct: 351 ELKAQQELIDKVIYEEEESFLKTLETGITLLNRIIEDMLGKNYKVVSGKVAFELYDTYGF 410

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E+GL+V+ + F   M+  + R+R+A + + G  I +  D           
Sbjct: 411 PLDLTELILSEKGLVVNRQEFEKEMNAQKARARNAASVETGDWIQLKEDDQEEFVGYDYF 470

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            TD     ++   ++ +     T  + + ++ P            FYAE GGQ+ D G +
Sbjct: 471 ETD-----VYITRYRQIQAKNKTQYQLVFNITP------------FYAESGGQVGDTGVL 513

Query: 592 EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHML 651
           +    +  + + +     ++HI +         +G      VD  +RK  A NHT TH+L
Sbjct: 514 KNEKETIPILDTKKENDLIVHITNKLPS----DLGSTFRAVVDVSKRKNAARNHTATHLL 569

Query: 652 NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS-K 710
           + ALR+VLG HV+Q+GS+V P+ LRFDFSH + V P+ LR+IE +VN  I+A +     +
Sbjct: 570 HKALRKVLGPHVEQRGSLVHPDYLRFDFSHFQKVSPDELRQIEKLVNADIRANIKREEHR 629

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
           E  + +A+ +  + A+FGE Y D VR +  G                  S ELCGGTH+ 
Sbjct: 630 EVPIDKAREMGAI-ALFGEKYGDVVRTIGFGD-----------------SIELCGGTHVD 671

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLE-KN 829
            T E   F ++ E  ++ G+RRI AV+   A +       L  E+       G+L++ K 
Sbjct: 672 ATGEIGFFRIVGETAVSAGVRRIEAVSGEKAEELSYIQSDLINEL-------GTLVKSKG 724

Query: 830 QVRKAQKKVAEENLQ 844
           Q+RK+ + + ++N Q
Sbjct: 725 QLRKSIENLLQQNAQ 739


>gi|325954950|ref|YP_004238610.1| alanyl-tRNA synthetase [Weeksella virosa DSM 16922]
 gi|323437568|gb|ADX68032.1| alanyl-tRNA synthetase [Weeksella virosa DSM 16922]
          Length = 869

 Score =  610 bits (1573), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 351/918 (38%), Positives = 491/918 (53%), Gaps = 70/918 (7%)

Query: 63  VRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRA 122
           +R  F  FF+ +NH+   S+P+V  +DPTL+F N+GM Q+K  FLG A P     K  R 
Sbjct: 6   IRKEFLNFFQQRNHLIVDSAPIVLKDDPTLMFNNSGMAQFKEYFLGNATP-----KSNRI 60

Query: 123 CNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLP 182
            +TQKC+R  GKHNDLDDVGKDTYHHT FEMLGNWSFGDYFK EAI WAWELLT  Y + 
Sbjct: 61  ADTQKCLRVSGKHNDLDDVGKDTYHHTMFEMLGNWSFGDYFKKEAIAWAWELLTGTYGIG 120

Query: 183 ADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPCSEI 242
            D++Y T F GDEK G   D EA D+W + +   R+L    KDNFWEMGD GPCGPCSEI
Sbjct: 121 KDQIYVTVFEGDEKDGTQLDQEALDLWKEHIAEDRILLGNKKDNFWEMGDVGPCGPCSEI 180

Query: 243 HYDRTGNR-----DAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFE 297
           H D          D  SLVN D P  IEIWN+VF+Q+ R +DGSL+PLPAKH+DTG+GFE
Sbjct: 181 HVDIRPEEERLAVDGKSLVNQDHPQVIEIWNLVFMQYQRRADGSLEPLPAKHIDTGMGFE 240

Query: 298 RLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTL 357
           RL  +LQ K SNYDTDVF P+   +++ +G       +   D +  D+A RVV DH+R +
Sbjct: 241 RLAMVLQGKTSNYDTDVFRPLIKKLEKISG-------ITYGDNEITDIAIRVVVDHLRAV 293

Query: 358 SFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELK 417
           SFAIADG  P N G  YV+RRILRRA+ YG   L  ++ F   L  I+   MGD FPEL 
Sbjct: 294 SFAIADGQLPSNTGAGYVIRRILRRAISYGYRFLNLKEPFIYLLFPILKDEMGDFFPELI 353

Query: 418 QREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG-KVLSGQDAFILWDTYGFPLDLT 476
           ++E+ +  +I  EE+SF +T+  G+ +  +     Q  KV+ G   F L+DTYGFP DL+
Sbjct: 354 KQESIVTGVIREEESSFLRTIEHGLNRLNQIIDQYQDTKVVPGHVVFELYDTYGFPADLS 413

Query: 477 QLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDS 536
           +++ E+    +D +GF   M + + RS+ A   +    +++  +A        +L+T+  
Sbjct: 414 RIVVEDHNFTIDEDGFEVEMSKQKARSKKATALETDDWVIVRENANEEFVGYDILSTE-- 471

Query: 537 FKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFG 596
              +    ++ V        EF +         +VL  + FYAE GGQI D G +     
Sbjct: 472 ---VQITRYRKVKNK---KGEFYQ---------LVLDKTPFYAESGGQIGDTGLLISANE 516

Query: 597 SFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALR 656
              V N +     +IH           ++      +VD   R     NH+ TH+L+ ALR
Sbjct: 517 QIEVLNTKKENNLIIHFVEQLPS----NIEATFQAEVDSITRNETQKNHSATHLLHEALR 572

Query: 657 EVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAE 716
            VLG HV+QKGS V P+ LRFDFSH   +  E +  +E IVN++I A + +  K     +
Sbjct: 573 TVLGTHVEQKGSYVGPDYLRFDFSHFGKMTTEEIAEVEKIVNDRIVASIPLDEKRNIPFD 632

Query: 717 AKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAE 776
                G  A+FGE Y D VR++  G                  S ELCGGTH+ NT +  
Sbjct: 633 EAVSQGAMALFGEKYGDYVRLIKFGS-----------------SVELCGGTHVKNTSDIR 675

Query: 777 AFALLSEEGIAKGIRRITAVTTGLAY-------KAFEAACSLEKEVDDASKIEGSLLEKN 829
            F + SE   A GIRRI A+T+  A        K +++     K   DA K    LL++N
Sbjct: 676 LFKITSESSTAAGIRRIEAITSNAAIDVLKEAEKNYQSVLDTLKTKSDAKKAVQQLLDEN 735

Query: 830 QVRKAQ-KKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQ 888
               AQ KK  E+ + +  K   E  +    N        ++  L+  + ++  + +  +
Sbjct: 736 ----AQLKKQVEKFVAQQAKAEKENWKQQVKNINGIQFLAIKTDLNTQSAKQNAIDLTNE 791

Query: 889 KGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASG 948
                +V +T +   K  +   + +   + KQL   + +    + ++G  G G+  LA+ 
Sbjct: 792 LDNAFVVVATKDAV-KPSITISIAKNLVEEKQLNAGQIVREIAKNIQG-SGGGQAFLATA 849

Query: 949 QGTDAAQVTPAMDLAAEF 966
            G D   +  A+  A  F
Sbjct: 850 GGKDVTGIDKALAQAETF 867


>gi|390437363|ref|ZP_10225901.1| alanyl-tRNA ligase [Pantoea agglomerans IG1]
          Length = 875

 Score =  610 bits (1573), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 362/930 (38%), Positives = 524/930 (56%), Gaps = 81/930 (8%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    +      TR
Sbjct: 7   EIRQAFLDFFHSKGHEVVTSSSLVPNNDPTLLFTNAGMNQFKDVFLGQDKRD-----YTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK EAI +AWELLT  + +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIGFAWELLTSEQWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA DIW   +  P  R++  G         DNFW+M
Sbjct: 122 SLPKERLWVTIY--------ETDDEAFDIWANEIGVPRERIIRIGDNKGSAYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPCSEI YD   +           D    IEIWNIVF+QFNR++DG++ PLP  
Sbjct: 174 GDTGPCGPCSEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMLPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER++++LQ+  SNY+ D+F  +  A+ Q TGA   S K           + R
Sbjct: 234 SVDTGMGLERISAVLQHVNSNYEIDLFQKLIQAVAQVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  +V+V
Sbjct: 283 VIADHIRSCAFLIADGVIPSNENRGYVLRRIIRRAVRHGN-MLGAKEAFFYKLVAPLVEV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    EL++++A + +++ +EE  F +TL +G+    +  + +QG  L G+  F L+DT
Sbjct: 342 MGAAGEELQRQQAQVEQVLKSEEDQFARTLERGLALLDEELEKLQGDTLDGEIVFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           +GFP DLT  +  ER L +D  GF  AM++ R+R+R A    A  + V+  DA +     
Sbjct: 402 FGFPADLTADVCRERNLKIDEAGFERAMEQQRQRAREASGFGADYSNVIRIDAAS----- 456

Query: 529 GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDE 588
                  SFK     D  + +KA+Y   E ++ V  G +  +VL  + FY E GGQ+ D 
Sbjct: 457 -------SFKGYDQLDLAATVKALYVAGEAVDEVTAGQDAVVVLDETPFYGESGGQVGDT 509

Query: 589 GFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
           G ++G    F V++ Q YG  + H+G LT  AG+  +G+ +  +VD  RR  I  NH+ T
Sbjct: 510 GLLKGKNAEFSVQDTQKYGQAIGHVGKLT--AGQLRIGDRLEAQVDAARRARIRLNHSAT 567

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+L+ ALR+VLG+HV QKGS+V  + LRFDFSH + + P+ +R++E IVN QI+  L V 
Sbjct: 568 HLLHAALRQVLGEHVAQKGSLVNDKYLRFDFSHFEAMKPQEIRQVEDIVNAQIRRNLPVE 627

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
           ++   L  AK   G  A+FGE Y   VRV+ +G                  S ELCGGTH
Sbjct: 628 TEVMDLDAAKS-KGAMALFGEKYDQRVRVLTMG----------------DFSVELCGGTH 670

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEK 828
            + T +   F + +E G A GIRRI A+T   A     A  S  +++    K   S L +
Sbjct: 671 AARTGDIGLFRIQAESGTAAGIRRIEAITGEGALAQVNAQSSQLQDLAQLVKANSSNLNE 730

Query: 829 ------NQVRKAQKKVAE-ENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREA 881
                 + VR  +K++ +  + Q A + A+ ++ A    G    +S +   ++   +R  
Sbjct: 731 KVRGLVDHVRALEKELQQLRDQQAAQESASLSSNAIDIKGVKLLVSELN-NVEPKMLRTM 789

Query: 882 VLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKG 941
           V  +  Q G  ++V +T  T  K  + AGV +  D + +++  E +    Q + G+ G G
Sbjct: 790 VDDLKNQLGSAIIVLAT-VTEGKVSLIAGVTK--DLTDRVKAGELIAGLAQQVGGKGG-G 845

Query: 942 KGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           +  +A   G DA  +  A+    ++ + +L
Sbjct: 846 RPDMAQAGGNDAGALKGALAGVEDWVSSRL 875


>gi|90580351|ref|ZP_01236158.1| alanyl-tRNA synthetase [Photobacterium angustum S14]
 gi|90438653|gb|EAS63837.1| alanyl-tRNA synthetase [Vibrio angustum S14]
          Length = 874

 Score =  610 bits (1572), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 373/935 (39%), Positives = 526/935 (56%), Gaps = 92/935 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  +  FFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EIRRAYLAFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDTFLGL-----EKRSYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI +AWE LT V +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKHDAIAYAWEFLTSVLKL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           PADRL  T +          D+EA +IW K   +PA R++  G K        DNFW+MG
Sbjct: 122 PADRLVVTVY--------ETDDEAFEIWNKEVGIPADRIVRIGDKKGGKPFESDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
           DTGPCGPC+EI YD      G R        D    IEIWN VF+QFNR++DG+++PLP 
Sbjct: 174 DTGPCGPCTEIFYDHGDHIWGGRPGTP--EEDGDRFIEIWNNVFMQFNRQADGTMEPLPK 231

Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
             VDTG+G ER+ +I+Q   SNY+ D+F  +     +  G    S           + + 
Sbjct: 232 PSVDTGMGIERIAAIMQGVHSNYEIDIFQTLIKEAAKVIGFEDLS-----------NQSL 280

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RVVADHIR+ ++ I+DG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF  LV  + +
Sbjct: 281 RVVADHIRSCAYLISDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGAFFYKLVGPLAE 339

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWD 467
           +MG    ELK ++  + +++  EE +FG+TL +G+    +A  ++ GKVL G+  F L+D
Sbjct: 340 IMGTAGEELKAQQELVEKVLKIEEDNFGRTLDRGLTILNEALDNLDGKVLDGETVFKLYD 399

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQN--KQAGGAIVMDADATAAL 525
           TYGFP DLT  +A ERG  +D +GF  AM+E R+R+R A N       AI +DA+     
Sbjct: 400 TYGFPADLTNDVARERGFTIDEDGFEAAMEEQRQRARDAGNFGVDYNDAIKVDAETEFC- 458

Query: 526 HKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
              G  ATD   + +          A+Y     ++SV  G E  +VL ++ FYAE GGQ 
Sbjct: 459 ---GYSATDGEGEIV----------ALYRDGVAVDSVNAGEEALVVLTNTPFYAESGGQC 505

Query: 586 FDEGFI--EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAP 643
            D G +  EG+   F V + Q +G  + H G + EG    +VG+++   VD  RR  I+ 
Sbjct: 506 GDSGILTAEGVL--FNVADTQKFGAAIGHKGQVAEGT--LTVGQKLTASVDSARRAAISL 561

Query: 644 NHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKA 703
           NH+ TH+++ ALR +LG+HV QKGS+V  + LRFDFS+ + V PE LR +E++VN+QI+A
Sbjct: 562 NHSATHLMHAALRNILGEHVAQKGSLVKADGLRFDFSNLEAVKPEQLRAVETMVNDQIRA 621

Query: 704 ELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAEL 763
              + +    +  AK   G  A+FGE Y D VRV+++G                  S EL
Sbjct: 622 NHAIETNIMDIEAAKA-KGAMALFGEKYDDEVRVLSMGE----------------FSTEL 664

Query: 764 CGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAA-CSLEKEVDDASKIE 822
           CGG H + T +   F +LSE GIA GIRRI AVT   A +A       L K         
Sbjct: 665 CGGIHATRTGDIGLFKILSESGIAAGIRRIEAVTGASAIEAMHTEDAMLAKTARLVKSDS 724

Query: 823 GSLLEKNQVRKAQKKVAEENLQK------AVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            S++ K +   +  K  E+ +Q+      A + A    +A   NG    I+++  G D  
Sbjct: 725 ASVVSKVEALVSHSKQLEKEIQQLKDKLAAQEGANLINQAQEINGVKVLIAKLN-GADNK 783

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
           A+R  V ++  Q G  V++   + + +K  + AGV +  D   +++  E +    Q + G
Sbjct: 784 ALRGMVDELKNQLGSGVVLLG-NVSDDKVGLIAGVTK--DLVGKVKAGELVNLVAQQVGG 840

Query: 937 RCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           + G G+  +A   GTDAA +  A++  A + A KL
Sbjct: 841 KGG-GRPDMAQAGGTDAAALPAALETVAPWLADKL 874


>gi|413916473|gb|AFW56405.1| hypothetical protein ZEAMMB73_266824 [Zea mays]
          Length = 399

 Score =  610 bits (1572), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 274/344 (79%), Positives = 306/344 (88%), Gaps = 2/344 (0%)

Query: 58  WPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLS 117
           WP+ ++R  F  FFE K H  W SSPVVPV+DPTLLFANAGMNQ+KP+FLGTA P++ L 
Sbjct: 55  WPSRRIRQEFLTFFESKAHTRWPSSPVVPVDDPTLLFANAGMNQFKPVFLGTAAPDSPLG 114

Query: 118 KLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTK 177
           +L RACNTQKCIRAGGKHNDLDDVG DTYHHTFFEMLGNWSFGDYFK EAI WAWELLT+
Sbjct: 115 RLHRACNTQKCIRAGGKHNDLDDVGNDTYHHTFFEMLGNWSFGDYFKEEAIRWAWELLTQ 174

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCG 237
           VY+LP DR+YATYFGGD K+GL  D+E++DIWLK+LP  +VLPFGCKDNFWEMGDTGPCG
Sbjct: 175 VYKLPTDRIYATYFGGDVKSGLGADDESKDIWLKYLPKEKVLPFGCKDNFWEMGDTGPCG 234

Query: 238 PCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFE 297
           PC+EIH+DR GNRDAASLVNNDDPTCIEIWN+VFIQFNRE+DG+L+PLPAKHVDTGLGFE
Sbjct: 235 PCTEIHFDRIGNRDAASLVNNDDPTCIEIWNLVFIQFNREADGTLRPLPAKHVDTGLGFE 294

Query: 298 RLTSILQNKMSNYDTDVFMPIFDAIQQ--ATGARPYSGKVGADDADKVDMAYRVVADHIR 355
           RLTSILQNKMSNYDTD+FMPIFDAI Q    G +PYSGK+G+DD  KVDMAYRVVADHIR
Sbjct: 295 RLTSILQNKMSNYDTDIFMPIFDAIHQLAGDGIQPYSGKLGSDDIGKVDMAYRVVADHIR 354

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFN 399
           TLSFAIADGS PGNEGREYVLRRILRRAV +G + LKA+  FF+
Sbjct: 355 TLSFAIADGSQPGNEGREYVLRRILRRAVHFGHQKLKAKQSFFS 398


>gi|372275051|ref|ZP_09511087.1| alanyl-tRNA synthetase [Pantoea sp. SL1_M5]
          Length = 875

 Score =  610 bits (1572), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 361/930 (38%), Positives = 524/930 (56%), Gaps = 81/930 (8%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    +      TR
Sbjct: 7   EIRQAFLDFFHSKGHEVVTSSSLVPNNDPTLLFTNAGMNQFKDVFLGQDKRD-----YTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK EAI +AWELLT  + +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIGFAWELLTSEQWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA DIW   +  P  R++  G         DNFW+M
Sbjct: 122 SLPKERLWVTIY--------ETDDEAFDIWANEIGVPRERIIRIGDNKGSAYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPCSEI YD   +           D    IEIWNIVF+QFNR++DG++ PLP  
Sbjct: 174 GDTGPCGPCSEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMLPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER++++LQ+  SNY+ D+F  +  A+ Q TGA   S K           + R
Sbjct: 234 SVDTGMGLERISAVLQHVNSNYEIDLFQKLIQAVAQVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  +++V
Sbjct: 283 VIADHIRSCAFLIADGVIPSNENRGYVLRRIIRRAVRHGN-MLGAKEAFFYKLVAPLIEV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    EL++++A + +++ +EE  F +TL +G+    +  + +QG  L G+  F L+DT
Sbjct: 342 MGAAGEELQRQQAQVEQVLKSEEDQFARTLERGLALLDEELEKLQGDTLDGEIVFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           +GFP DLT  +  ER L +D  GF  AM++ R+R+R A    A  + V+  DA +     
Sbjct: 402 FGFPADLTADVCRERNLKIDEAGFERAMEQQRQRAREASGFGADYSNVIRIDAAS----- 456

Query: 529 GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDE 588
                  SFK     D  + +KA+Y   E ++ V  G +  +VL  + FY E GGQ+ D 
Sbjct: 457 -------SFKGYDQLDLAATVKALYVAGEAVDEVTAGQDAVVVLDETPFYGESGGQVGDT 509

Query: 589 GFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
           G ++G    F V++ Q YG  + H+G LT  AG+  +G+ +  +VD  RR  I  NH+ T
Sbjct: 510 GLLKGKNAEFSVQDTQKYGQAIGHVGKLT--AGQLRIGDRLEAQVDAARRARIRLNHSAT 567

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+L+ ALR+VLG+HV QKGS+V  + LRFDFSH + + P+ +R++E IVN QI+  L V 
Sbjct: 568 HLLHAALRQVLGEHVAQKGSLVNDKYLRFDFSHFEAMKPQEIRQVEDIVNAQIRRNLPVE 627

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
           ++   L  AK   G  A+FGE Y   VRV+ +G                  S ELCGGTH
Sbjct: 628 TEVMDLDAAKS-KGAMALFGEKYDQRVRVLTMG----------------DFSVELCGGTH 670

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEK 828
            + T +   F + +E G A GIRRI A+T   A     A  S  +++    K   S L +
Sbjct: 671 AARTGDIGLFRIQAESGTAAGIRRIEAITGEGALAQVNAQSSQLQDLAQLVKANSSNLNE 730

Query: 829 ------NQVRKAQKKVAE-ENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREA 881
                 + VR  +K++ +  + Q A + A+ ++ A    G    +S +   ++   +R  
Sbjct: 731 KVRGLVDHVRALEKELQQLRDQQAAQESASLSSNAIDIKGVKLLVSELN-NVEPKMLRTM 789

Query: 882 VLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKG 941
           V  +  Q G  ++V +T  T  K  + AGV +  D + +++  E +    Q + G+ G G
Sbjct: 790 VDDLKNQLGSAIIVLAT-VTEGKVSLIAGVTK--DLTDRVKAGELIAGLAQQVGGKGG-G 845

Query: 942 KGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           +  +A   G DA  +  A+    ++ + +L
Sbjct: 846 RPDMAQAGGNDAGALKGALAGVEDWVSSRL 875


>gi|320155348|ref|YP_004187727.1| alanyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
 gi|319930660|gb|ADV85524.1| alanyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
          Length = 860

 Score =  610 bits (1572), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 367/916 (40%), Positives = 520/916 (56%), Gaps = 90/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR+ F KFFE K H    SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRNAFLKFFESKGHQIVDSSSLVPHNDPTLLFTNAGMNQFKDCFLGA-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT+  +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIAFAWEFLTETLKL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           P DRL  T +          D+EA DIW +   +PA R++  G K        DNFW MG
Sbjct: 122 PKDRLLVTVY--------ETDDEAFDIWNQKVGVPADRIIRIGDKKGGKQYESDNFWTMG 173

Query: 232 DTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
           DTGPCGPC+EI YD      G R        D    IEIWN VF+QFNR +DG+++PLP 
Sbjct: 174 DTGPCGPCTEIFYDHGEHIWGGRPGTP--EEDGDRFIEIWNNVFMQFNRHADGTMEPLPK 231

Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
             VDTG+G ER+++I+Q   SNY+ DVF  +  A  +  G    S           + + 
Sbjct: 232 PSVDTGMGIERISAIMQGVHSNYEIDVFQKLIKATAEIVGCEDLS-----------NQSL 280

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RV+ADHIR+ SF IADG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF+ LV ++ +
Sbjct: 281 RVIADHIRSCSFLIADGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGVFFHKLVGVLAE 339

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWD 467
           VMG    ELK+++A + +++  EE +FG+TL +G+    +A   ++GK L G+  F L+D
Sbjct: 340 VMGSAADELKKQQAVVEKVLRIEEENFGRTLERGMVILNEALDALEGKELDGETVFKLYD 399

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
           TYGFP DLT  +A ER   +D  GF  AM+E R+R+R A      G    D +A      
Sbjct: 400 TYGFPADLTNDVARERDFTIDEAGFEKAMEEQRQRAREA------GQFGTDYNAK----- 448

Query: 528 RGVLATDDSFKFIWFQDHK--SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
              + T+   +F  +   +  SV+  I+   E  +S+  G++  I+L  + FYAE GGQ 
Sbjct: 449 ---IKTESETEFCGYTGTQGNSVVAEIFVEGEAADSLSAGDKAIIILGETPFYAESGGQC 505

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D G ++   G F V + Q  G  + H G L EG    + G++V   VD +RR  I+ NH
Sbjct: 506 GDSGVLKTESGLFQVEDTQKLGNAIAHHGVLVEGV--LAKGDQVSAIVDAERRAAISLNH 563

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+L+ ALR+VLG+HV QKGS+V  E LRFDFSH + V    L+ +E +VN QI+   
Sbjct: 564 SATHLLHAALRQVLGEHVAQKGSLVKAENLRFDFSHLEAVTAAELKEVERLVNAQIRRNH 623

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    +  AK   G  A+FGE Y D VRV+++G                  S ELCG
Sbjct: 624 AIETNIMDIESAKQ-KGAMALFGEKYDDEVRVLSMG----------------DFSTELCG 666

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEA-ACSLEKEVDDASKIEGS 824
           G H SNT +   F + SE GIA GIRRI AVT   A +A +A A   E+++ DA+    S
Sbjct: 667 GIHASNTGDIGLFKITSEGGIAAGIRRIEAVTGEAALEAIDAQARKFEEKLQDAANKAKS 726

Query: 825 LLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLK 884
           L  + ++++ + K+A +     +    E A      G    +++++ G D  A+R  V +
Sbjct: 727 L--EKEIQQLKDKLASQASANLIDQVKEIA------GVKVLVAKLD-GADNKALRGMVDE 777

Query: 885 VIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGG 944
           +  Q G  +++   +   +K  + AGV +  D + +++  E +    Q + G+ G G+  
Sbjct: 778 LKNQMGSGIIMLG-NVADDKVGLIAGVTQ--DLTSKVKAGELVNMVAQQVGGK-GGGRPD 833

Query: 945 LASGQGTDAAQVTPAM 960
           +A   GTD++ +  A+
Sbjct: 834 MAQAGGTDSSALPSAL 849


>gi|153835573|ref|ZP_01988240.1| alanyl-tRNA synthetase [Vibrio harveyi HY01]
 gi|148867838|gb|EDL67069.1| alanyl-tRNA synthetase [Vibrio harveyi HY01]
          Length = 860

 Score =  610 bits (1572), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 372/915 (40%), Positives = 515/915 (56%), Gaps = 88/915 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR+ F KFFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRNAFLKFFESKGHQIVESSSLVPHNDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT+  +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIAFAWEFLTETLKL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           PADRL  T +          D+EA DIW K   +PA R++  G K        DNFW+MG
Sbjct: 122 PADRLLVTVY--------ETDDEAFDIWNKKVGVPADRIIRIGDKKGGKPFESDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
           DTGPCGPC+EI YD      G R        D    IEIWN VF+QFNR++DG+++PLP 
Sbjct: 174 DTGPCGPCTEIFYDHGEHIWGGRPGTP--EEDGDRFIEIWNNVFMQFNRQADGTMEPLPK 231

Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
             VDTG+G ER+++I+Q   SNY+ DVF  +  A  +  G    S           + + 
Sbjct: 232 PSVDTGMGIERISAIMQGVHSNYEIDVFQALIKAAAEVIGYEDLS-----------NQSL 280

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RV+ADHIR+ SF I DG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF+ LV ++  
Sbjct: 281 RVIADHIRSCSFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGAFFHKLVGVLAD 339

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWD 467
           +MG    ELK+++A + +++  EE +FG+TL +G+    +A  ++ GKVL G+  F L+D
Sbjct: 340 IMGTAGEELKRQQAVVEKVLRIEEENFGRTLERGMAILNEALDNLDGKVLDGETVFKLYD 399

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
           TYGFP DLT  +A ER   +D EGF  AM+E R+R+R A N           D  AA+  
Sbjct: 400 TYGFPADLTNDVAREREFAIDEEGFEKAMEEQRQRAREAGN--------FGTDYNAAIK- 450

Query: 528 RGVLATDDSFKFIWFQDHK--SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
                 D   +F  +   K  S + A++     +ES+  G++  IVL  + FYAE GGQ 
Sbjct: 451 -----VDTQTEFCGYTGTKGSSSVAAMFVEGNEVESLSAGDKAIIVLGETPFYAESGGQC 505

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D G I    G F V + Q  G  + H G + EG    + G+EV   VD +RR  I+ NH
Sbjct: 506 GDAGEIRTESGVFRVEDTQKLGNAIAHHGVMAEGV--LAKGDEVATIVDAERRAAISLNH 563

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+L+ ALR++LG+HV QKGS+V  + LRFDFSH + V    L+ +E +VN QI+   
Sbjct: 564 SATHLLHAALRQLLGEHVTQKGSLVKADGLRFDFSHLEAVTAAELKEVERLVNAQIRRNH 623

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    +  AK   G  A+FGE Y D VRV+++G                  S ELCG
Sbjct: 624 VIETNVMDIESAKK-KGAMALFGEKYDDEVRVLSMG----------------DFSTELCG 666

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSL 825
           G H S+T +   F + SE GIA GIRRI AVT   A  A EA  +  +E    S  +   
Sbjct: 667 GIHASSTGDIGLFKITSEGGIAAGIRRIEAVTGEGALDAIEAQTAKYEEKLAESAQKAKS 726

Query: 826 LEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKV 885
           LEK +++K + K+A      A + A    +    NG    I+ +E G D   +R  V  +
Sbjct: 727 LEK-EIQKLKDKMA------AAESANIMGKVQDINGTKVLIAALE-GADNKNLRTMVDDI 778

Query: 886 IEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGL 945
             Q G  V++ + +   +K  + AGV +  D   +++  + +    + + G+ G G+  +
Sbjct: 779 KNQVGSGVILLA-NVNDDKIGLIAGVTK--DLIGKVKAGDLVKMVAEQVGGKGG-GRPDM 834

Query: 946 ASGQGTDAAQVTPAM 960
           A   GTD A +  A+
Sbjct: 835 AQAGGTDVAALPAAI 849


>gi|343502334|ref|ZP_08740191.1| alanyl-tRNA synthetase [Vibrio tubiashii ATCC 19109]
 gi|418480063|ref|ZP_13049129.1| alanyl-tRNA synthetase [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
 gi|342815071|gb|EGU50000.1| alanyl-tRNA synthetase [Vibrio tubiashii ATCC 19109]
 gi|384572256|gb|EIF02776.1| alanyl-tRNA synthetase [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
          Length = 860

 Score =  610 bits (1572), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 379/917 (41%), Positives = 520/917 (56%), Gaps = 92/917 (10%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR+ F KFFE K H    SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRNAFLKFFESKGHQIVDSSSLVPHNDPTLLFTNAGMNQFKDCFLGA-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LTK   L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIAFAWEFLTKTLGL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           P ++L  T +          D+EA +IW K   +PA +++  G K        DNFW MG
Sbjct: 122 PEEKLLVTVY--------ETDDEAFEIWNKKVGVPADKIVRIGDKEGGKKFESDNFWTMG 173

Query: 232 DTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
           DTGPCGPC+EI YD      G R        D    IEIWN VF+QFNR +DG+++PLP 
Sbjct: 174 DTGPCGPCTEIFYDHGEHIWGGRPGTP--EEDGDRFIEIWNNVFMQFNRHADGTMEPLPK 231

Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
             VDTG+G ER+++I+Q   SNY+ DVF  +  A  +          VG DD    + + 
Sbjct: 232 PAVDTGMGIERISAIMQGVHSNYEIDVFQKLIKATAEV---------VGHDDLS--NQSL 280

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RV+ADHIR+ SF IADG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF+ LV ++ +
Sbjct: 281 RVIADHIRSCSFLIADGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGVFFHKLVGVLAE 339

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWD 467
           VMG    ELK+++  + +++  EE +FG+TL +G+    +A   ++GK L G+  F L+D
Sbjct: 340 VMGSAAEELKKQQELVEKVLRIEEENFGRTLERGMVILNEALDVLEGKELDGETVFKLYD 399

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
           TYGFP DLT  +A ER   +D  GF  AM+E R+R+R A      G    D +AT     
Sbjct: 400 TYGFPADLTNDVARERDFTIDEAGFEKAMEEQRQRAREA------GQFGTDYNAT----- 448

Query: 528 RGVLATDDSFKFIWF--QDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
              + T+   +F  +   + KS +  I+   E +E++  G++  I+L  + FYAE GGQ 
Sbjct: 449 ---IKTEAESEFCGYTGTEGKSNVAEIFVDGEVVEALSAGDKAIIILGETPFYAESGGQC 505

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D G ++   G F V + Q  G  + H G L EG    + G+EV   VD +RR  I+ NH
Sbjct: 506 GDAGVLKTESGLFKVEDTQKLGNAIAHHGVLAEGV--LAKGDEVQATVDAERRASISLNH 563

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+L+ ALR VLG+HV QKGS+V PE LRFDFSH + V P  L+ +E +VN Q++   
Sbjct: 564 SATHLLHAALRSVLGEHVTQKGSLVKPENLRFDFSHLEAVTPAELKEVERLVNAQVRRNH 623

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    +  AK   G  A+FGE Y D VRV+++G                  S ELCG
Sbjct: 624 VIETNVMDIESAKQ-KGAMALFGEKYDDEVRVLSMGE----------------FSTELCG 666

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEA--ACSLEKEVDDASKIEG 823
           G H SNT +   F + SE GIA GIRRI AVT   A  A EA  A   EK  + ASK + 
Sbjct: 667 GIHASNTGDIGLFKITSEGGIAAGIRRIEAVTGEAALDAIEAQQAKFEEKLAESASKAKS 726

Query: 824 SLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVL 883
             LEK +++K + K+A      A + A   A+A   NG    I+ +E G D   +R  V 
Sbjct: 727 --LEK-EIQKLKDKMA------AAESANIMAKAQEINGVKVLIAGME-GADPKNLRTMVD 776

Query: 884 KVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKG 943
               Q G  V++ + +   +K  + AGV +  D   +++  + +    + + G+ G G+ 
Sbjct: 777 NAKNQMGSGVVMIA-NVNGDKIGLIAGVTK--DLIGKVKAGDLVKMVAEQVGGKGG-GRP 832

Query: 944 GLASGQGTDAAQVTPAM 960
            +A   GTD A +  AM
Sbjct: 833 DMAQAGGTDVAALPEAM 849


>gi|388602721|ref|ZP_10161117.1| alanyl-tRNA ligase [Vibrio campbellii DS40M4]
          Length = 860

 Score =  609 bits (1571), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 371/915 (40%), Positives = 516/915 (56%), Gaps = 88/915 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR+ F KFFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRNAFLKFFESKGHQIVESSSLVPHNDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT+  +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIAFAWEFLTETLKL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           PADRL  T +          D+EA DIW +   +PA R++  G K        DNFW+MG
Sbjct: 122 PADRLLVTVY--------ETDDEAFDIWNQKVGVPADRIIRIGDKKGGKPFESDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
           DTGPCGPC+EI YD      G R        D    IEIWN VF+QFNR++DG+++PLP 
Sbjct: 174 DTGPCGPCTEIFYDHGEHIWGGRPGTP--EEDGDRFIEIWNNVFMQFNRQADGTMEPLPK 231

Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
             VDTG+G ER+++I+Q   SNY+ DVF  +  A  +  G    S           + + 
Sbjct: 232 PSVDTGMGIERISAIMQGVHSNYEIDVFQALIKAAAEVIGYEDLS-----------NQSL 280

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RV+ADHIR+ SF I DG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF+ LV ++ +
Sbjct: 281 RVIADHIRSCSFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGAFFHKLVGVLAE 339

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWD 467
           +MG    ELK+++A + +++  EE +FG+TL +G+    +A   + GKVL G+  F L+D
Sbjct: 340 IMGTAGEELKRQQAVVEKVLRIEEENFGRTLERGMAILNEALDSLDGKVLDGETVFKLYD 399

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
           TYGFP DLT  +A ER   +D EGF  AM+E R+R+R A N           D  AA+  
Sbjct: 400 TYGFPADLTNDVAREREFAIDEEGFEKAMEEQRQRAREAGN--------FGTDYNAAIK- 450

Query: 528 RGVLATDDSFKFIWFQDHK--SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
                 D   +F  +   K  S + A++   + +ES+  G++  IVL  + FYAE GGQ 
Sbjct: 451 -----VDTQTEFCGYTGTKGSSSVAAMFVEGDEVESLSAGDKAIIVLGETPFYAESGGQC 505

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D G I    G F V + Q  G  + H G + EG    + G+EV   VD +RR  I+ NH
Sbjct: 506 GDAGEIRTESGVFRVEDTQKLGNAIAHHGVMAEGV--LAKGDEVATIVDAERRAAISLNH 563

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+L+ ALR++LG+HV QKGS+V  + LRFDFSH + V    L+ +E +VN QI+   
Sbjct: 564 SATHLLHAALRQLLGEHVTQKGSLVKADGLRFDFSHLEAVTAAELKEVERLVNAQIRRNH 623

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    +  AK   G  A+FGE Y D VRV+++G                  S ELCG
Sbjct: 624 VIETNVMDIESAKK-KGAMALFGEKYDDEVRVLSMG----------------DFSTELCG 666

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSL 825
           G H S+T +   F + SE GIA GIRRI AVT   A  A EA  +  +E    S  +   
Sbjct: 667 GIHASSTGDIGLFKITSEGGIAAGIRRIEAVTGEGALDAIEAQAAKYEEKLAESAQKAKS 726

Query: 826 LEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKV 885
           LEK +++K + K+A      A + A    +    NG    I+ +E G D   +R  V  +
Sbjct: 727 LEK-EIQKLKDKMA------AAESANIMGKVQDINGTKVLIAALE-GADNKNLRTMVDDI 778

Query: 886 IEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGL 945
             Q G  V++ + +   +K  + AGV +  D   +++  + +    + + G+ G G+  +
Sbjct: 779 KNQVGSGVILLA-NVNDDKIGLIAGVTK--DLIGKVKAGDLVKMVAEQVGGKGG-GRPDM 834

Query: 946 ASGQGTDAAQVTPAM 960
           A   GTD A +  A+
Sbjct: 835 AQAGGTDVAALPAAI 849


>gi|323496144|ref|ZP_08101204.1| alanyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
 gi|323318888|gb|EGA71839.1| alanyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
          Length = 860

 Score =  609 bits (1570), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 376/917 (41%), Positives = 519/917 (56%), Gaps = 92/917 (10%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR+ F KFFE K H    SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRNAFLKFFESKGHQIVDSSSLVPHNDPTLLFTNAGMNQFKDCFLGA-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT+  +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIAFAWEFLTETLQL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           P DRL  T +          D+EA DIW K   +PA R++  G K        DNFW MG
Sbjct: 122 PKDRLLVTVY--------ETDDEAFDIWNKKVGVPADRIVRIGDKEGGKQFESDNFWTMG 173

Query: 232 DTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
           DTGPCGPC+EI YD      G R        D    IEIWN VF+QFNR +DG+++PLP 
Sbjct: 174 DTGPCGPCTEIFYDHGEHIWGGRPGTP--EEDGDRFIEIWNNVFMQFNRHADGTMEPLPK 231

Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
             VDTG+G ER+++I+Q   SNY+ DVF  +  A  +  G    S           + + 
Sbjct: 232 PAVDTGMGIERISAIMQGVHSNYEIDVFQKLIKATAEIVGHEDLS-----------NQSL 280

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RV+ADHIR+ SF IADG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF+ LV ++ +
Sbjct: 281 RVIADHIRSCSFLIADGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGVFFHKLVGVLAE 339

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWD 467
           VMG    ELK+++A + +++  EE +FG+TL +G+    +A   ++GK L G+  F L+D
Sbjct: 340 VMGSAGEELKKQQAVVEKVLRIEEENFGRTLERGMVILNEALDALEGKELDGETVFKLYD 399

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
           TYGFP DLT  +A ER   +D EGF  AM+E R+R+R A      G    D +AT     
Sbjct: 400 TYGFPADLTNDVAREREFTIDEEGFEKAMEEQRQRAREA------GQFGTDYNAT----- 448

Query: 528 RGVLATDDSFKFIWF--QDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
              + T++  +F  +     KS +  I+   E   S+  G++  I+L  + FYAE GGQ 
Sbjct: 449 ---IKTEEQTEFCGYTGTQGKSNVAEIFVEGEAAGSLSAGDKAIIILGETPFYAESGGQC 505

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D G ++   G F V + Q  G  + H G L EG    + G++V   VD +RR  I+ NH
Sbjct: 506 GDAGVLKTESGVFKVEDTQKLGNAIAHHGVLAEGV--LAKGDDVEAVVDAERRAAISLNH 563

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+L+ ALR+VLG+HV QKGS+V PE LRFDFSH + V P  L+ +E +VN Q++   
Sbjct: 564 SATHLLHAALRKVLGEHVTQKGSLVKPENLRFDFSHLEAVTPAELKEVERLVNAQVRHNH 623

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    +  AK   G  A+FGE Y D VRV+++G                  S ELCG
Sbjct: 624 VIETNVMDIESAKQ-KGAMALFGEKYDDEVRVLSMG----------------EFSTELCG 666

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEA--ACSLEKEVDDASKIEG 823
           G H SNT +   F + SE GIA GIRRI AVT   A  A EA  A   EK  + ASK + 
Sbjct: 667 GIHASNTGDIGLFKITSEGGIAAGIRRIEAVTGEAALDAIEAQQAKYEEKLAESASKAKS 726

Query: 824 SLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVL 883
             LEK +++K + K+A      A + A    +A   NG    ++ +E G D+  +R  V 
Sbjct: 727 --LEK-EIQKLKDKMA------AAESANIMGKAQEINGVKVLVAGME-GADSKNLRTMVD 776

Query: 884 KVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKG 943
            +  Q G  V++ + +    K  + AGV +  D   +++  + +    + + G+ G G+ 
Sbjct: 777 DIKNQMGSGVVMLA-NVNDGKIGLIAGVTK--DLIGKVKAGDLVKMVAEQVGGKGG-GRP 832

Query: 944 GLASGQGTDAAQVTPAM 960
            +A   G+D   +  A+
Sbjct: 833 DMAQAGGSDVDALPAAI 849


>gi|330446966|ref|ZP_08310617.1| alanyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328491157|dbj|GAA05114.1| alanyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 874

 Score =  609 bits (1570), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 376/935 (40%), Positives = 530/935 (56%), Gaps = 92/935 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  +  FFE K H   +SS +VP NDPTLLF NAGMNQ+K +FLG      +    TR
Sbjct: 7   EIRRAYLAFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDVFLGL-----EKRSYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI +AWE LT V +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKHDAIAYAWEFLTSVLKL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           PADRL  T +          D+EA DIW K   +PA R++  G K        DNFW+MG
Sbjct: 122 PADRLVVTVY--------ETDDEAFDIWNKEVGIPADRIVRIGDKKGGKPFESDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
           DTGPCGPC+EI YD      G R        D    IEIWN VF+QFNR++DG+++PLP 
Sbjct: 174 DTGPCGPCTEIFYDHGDHIWGGRPGTP--EEDGDRFIEIWNNVFMQFNRQADGTMEPLPK 231

Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
             VDTG+G ER+ +I+Q   SNY+ D+F  +   I++A         +G DD    + + 
Sbjct: 232 PSVDTGMGIERIAAIMQGVHSNYEIDIFQTL---IKEAAKV------IGFDDLS--NQSL 280

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RVVADHIR+ ++ I+DG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF  LV  + +
Sbjct: 281 RVVADHIRSCAYLISDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGAFFYKLVGPLAE 339

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWD 467
           +MG    ELK ++  + +++  EE +FG+TL +G+    +A  ++ GKVL G+  F L+D
Sbjct: 340 IMGTAGEELKAQQELVEKVLKIEEDNFGRTLDRGLTILNEALDNLDGKVLDGETVFKLYD 399

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQN--KQAGGAIVMDADATAAL 525
           TYGFP DLT  +A ERG  +D EGF  AM+E R+R+R A N       AI +DA+     
Sbjct: 400 TYGFPADLTNDVARERGFSIDEEGFEAAMEEQRQRARDAGNFGVDYNDAIKVDAETEFC- 458

Query: 526 HKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
              G  ATD   + +          A+Y     ++SV  G +  +VL ++ FYAE GGQ 
Sbjct: 459 ---GYSATDGEGEIV----------ALYRDGVAVDSVNAGEDALVVLTNTPFYAESGGQC 505

Query: 586 FDEGFI--EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAP 643
            D G +  EG+   F V + Q +G  + H G + EG    +VG+++   VD  RR  I+ 
Sbjct: 506 GDSGILTAEGVL--FNVADTQKFGAAIGHKGQVAEGT--LTVGQKLTASVDSARRAAISL 561

Query: 644 NHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKA 703
           NH+ TH+++ ALR +LG+HV QKGS+V  + LRFDFS+ + V PE LR +E +VN+QI+ 
Sbjct: 562 NHSATHLMHAALRNILGEHVAQKGSLVKADGLRFDFSNLEAVKPEQLRAVEIMVNDQIRD 621

Query: 704 ELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAEL 763
              + +    +  AK   G  A+FGE Y D VRV+++G                  S EL
Sbjct: 622 NHAIETNIMDIEAAKA-KGAMALFGEKYDDEVRVLSMGE----------------FSTEL 664

Query: 764 CGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAA-CSLEKEVDDASKIE 822
           CGG H + T +   F +LSE GIA GIRRI AVT   A +A       L K         
Sbjct: 665 CGGIHATRTGDIGLFKILSESGIAAGIRRIEAVTGAAAIEAMHTEDAMLAKTARLVKSDS 724

Query: 823 GSLLEKNQVRKAQKKVAEENLQK------AVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            S++ K +   +  K  E+ +Q+      A + A    +A   NG    I+++  G D  
Sbjct: 725 ASVVSKVEALVSHSKQLEKEIQQLKDKLAAQEGANLINQAQEINGVKVLIAKLN-GADNK 783

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
           A+R  V ++  Q G  V++   + + +K  + AGV +  D   +++  E +    Q + G
Sbjct: 784 ALRGMVDELKNQLGSGVVLLG-NVSDDKVGLIAGVTK--DLVGKVKAGELVNLVAQQVGG 840

Query: 937 RCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           + G G+  +A   GTDAA +  A++  A + A KL
Sbjct: 841 KGG-GRPDMAQAGGTDAAALPAALETVAPWLADKL 874


>gi|304399190|ref|ZP_07381057.1| alanyl-tRNA synthetase [Pantoea sp. aB]
 gi|304353244|gb|EFM17624.1| alanyl-tRNA synthetase [Pantoea sp. aB]
          Length = 875

 Score =  609 bits (1570), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 360/919 (39%), Positives = 519/919 (56%), Gaps = 81/919 (8%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    +      TR
Sbjct: 7   EIRQAFLDFFHSKGHEVVTSSSLVPNNDPTLLFTNAGMNQFKDVFLGQDKRD-----YTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK EAI +AWELLT  + +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIGFAWELLTSEQWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA DIW   +  P  R++  G         DNFW+M
Sbjct: 122 SLPKERLWVTVY--------ETDDEAFDIWANEIGVPRERIIRIGDNKGSAYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPCSEI YD   +           D    IEIWNIVF+QFNR++DG++ PLP  
Sbjct: 174 GDTGPCGPCSEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMLPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER++++LQ+  SNY+ D+F  +  A+ Q TGA   S K           + R
Sbjct: 234 SVDTGMGLERISAVLQHVNSNYEIDLFQKLIQAVAQVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  +++V
Sbjct: 283 VIADHIRSCAFLIADGVIPSNENRGYVLRRIIRRAVRHGN-MLGAKEAFFYKLVAPLIEV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    EL++++A + +++ +EE  F +TL +G+    +  + +QG  L G+  F L+DT
Sbjct: 342 MGAAGEELQRQQAQVEQVLKSEEDQFARTLERGLALLDEELEKLQGDTLDGEIVFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           +GFP DLT  +  ER L +D  GF  AM++ R+R+R A    A  + V+  DA +     
Sbjct: 402 FGFPADLTADVCRERNLKIDEAGFEQAMEQQRQRAREASGFGADYSNVIRIDAAS----- 456

Query: 529 GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDE 588
                  SFK     D  + +KA+Y   E ++ V  G +  +VL  + FY E GGQ+ D 
Sbjct: 457 -------SFKGYDQLDLAATVKALYVAGEAVDEVTAGQDAVVVLDETPFYGESGGQVGDT 509

Query: 589 GFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
           G ++G    F V++ Q YG  + H+G LT  AG+  +G+ +  +VD  RR  I  NH+ T
Sbjct: 510 GLLKGKNAEFSVQDTQKYGQAIGHVGKLT--AGQLRIGDRLEAQVDAARRARIRLNHSAT 567

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+L+ ALR+VLG+HV QKGS+V  + LRFDFSH + + P+ +R++E IVN QI+  L V 
Sbjct: 568 HLLHAALRQVLGEHVAQKGSLVNDKYLRFDFSHFEAMKPQEIRQVEDIVNAQIRRNLPVE 627

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
           ++   L  AK   G  A+FGE Y   VRV+ +G                  S ELCGGTH
Sbjct: 628 TEVMDLDAAKS-KGAMALFGEKYDQRVRVLTMG----------------DFSVELCGGTH 670

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEK 828
            + T +   F + +E G A GIRRI A+T   A     A  S  +++    K   S L +
Sbjct: 671 AARTGDIGLFRIQAESGTAAGIRRIEAITGEGALAQVNAQSSQLQDLAQLVKANSSNLNE 730

Query: 829 ------NQVRKAQKKVAE-ENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREA 881
                 + VR  +K++ +  + Q A + A+ ++ A    G    +S +   ++   +R  
Sbjct: 731 KVRGLVDHVRALEKELQQLRDQQAAQESASLSSNAIDVKGVKLLVSELN-NVEPKMLRTM 789

Query: 882 VLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKG 941
           V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G+ G G
Sbjct: 790 VDDLKNQLGSAIIVLAT-VAEGKVSLIAGVTK--DLTGRVKAGELIAGLAQQVGGKGG-G 845

Query: 942 KGGLASGQGTDAAQVTPAM 960
           +  +A   GTDA  +  A+
Sbjct: 846 RPDMAQAGGTDAKGLKGAL 864


>gi|157369088|ref|YP_001477077.1| alanyl-tRNA synthetase [Serratia proteamaculans 568]
 gi|157320852|gb|ABV39949.1| alanyl-tRNA synthetase [Serratia proteamaculans 568]
          Length = 892

 Score =  608 bits (1569), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 360/940 (38%), Positives = 528/940 (56%), Gaps = 85/940 (9%)

Query: 54  QVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPN 113
           +++     ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG     
Sbjct: 16  KIMSKSTAEIRQAFLDFFHSKGHQVVASSSLVPDNDPTLLFTNAGMNQFKDVFLG----- 70

Query: 114 TQLSK--LTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWA 171
             L K   +RA  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI +A
Sbjct: 71  --LDKRAYSRATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAISYA 128

Query: 172 WELLT--KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG----- 222
           WELLT    + LP +RL+ T +          D+EA DIW + +  PA R++  G     
Sbjct: 129 WELLTGENWFNLPKERLWVTVY--------ETDDEAFDIWQQQIGVPAERIIRIGDNKGG 180

Query: 223 --CKDNFWEMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRES 278
               DNFW+MGDTGPCGPC+EI YD   +           D    IEIWN+VF+QFNR+S
Sbjct: 181 AFASDNFWQMGDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNLVFMQFNRQS 240

Query: 279 DGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGAD 338
           DG++ PLP   VDTG+G ER+ ++LQ+  SNY+ D+F  +  A+ + TGA     K    
Sbjct: 241 DGTMLPLPKPSVDTGMGLERIAAVLQHVNSNYEIDLFSKLIAAVAKVTGATDLDNK---- 296

Query: 339 DADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFF 398
                  + RV+ADHIR+ +F ++DG  P NEGR YVLRRI+RRAVR+G+ +L A+D FF
Sbjct: 297 -------SLRVIADHIRSCAFLVSDGVTPSNEGRGYVLRRIIRRAVRHGN-MLGAKDTFF 348

Query: 399 NGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLS 458
             LV  +++VMG    ELK++++ + +++  EE  F +TL +G+    +   ++QG  L 
Sbjct: 349 YKLVAPLIEVMGPAADELKRQQSLVEQVLKTEEDQFARTLERGLTLLDEELANLQGDTLD 408

Query: 459 GQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMD 518
           G+ AF L+DTYGFP+DLT  +  ERGL VD  GF  AM+  R R+R +            
Sbjct: 409 GETAFRLYDTYGFPVDLTADVCRERGLKVDEAGFEQAMEAQRRRARESSG--------FG 460

Query: 519 ADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFY 578
           AD  + +   G       F     +  +S + A++   + +  +  G E  +VL  + FY
Sbjct: 461 ADYNSMIRVDGA----SQFSGYDHEQQQSTVTALFRDGQPVNEIHAGEEAVVVLDETPFY 516

Query: 579 AEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRR 638
            E GGQ+ D+G ++     F V + Q YG  + H G L+ G+    V + V  K+D  RR
Sbjct: 517 GESGGQVGDKGVLKAANADFEVSDTQKYGQAIGHQGKLSHGS--LKVNDRVDAKIDTVRR 574

Query: 639 KLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVN 698
             I  NH+ TH+L+ ALR+ LG+HV QKGS+V  + LRFDFSH + + PE +R +E +VN
Sbjct: 575 NRIRLNHSATHLLHAALRQTLGEHVAQKGSLVNDKYLRFDFSHFEAMKPEQIRTVEDLVN 634

Query: 699 EQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLS 758
           +QI+  L V ++   L +AK   G  A+FGE Y D VRV+ +G                 
Sbjct: 635 QQIRRNLPVQTEVMALDDAKG-KGAMALFGEKYDDNVRVLTMG----------------D 677

Query: 759 ISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDA 818
            S ELCGGTH S T +   F +LSE G A GIRRI AVT   A         L ++V   
Sbjct: 678 FSTELCGGTHASRTGDIGLFRILSESGTAAGIRRIEAVTGDGAIATLHQQNDLLQDVAHL 737

Query: 819 SKIEGSLLEK------NQVRKAQKKVAE-ENLQKAVKVATETAEAAASNGKPFCISRVEV 871
            K + + L        ++ R  +K++ + ++ Q A + A+ +++A   NG    +S+++ 
Sbjct: 738 VKGDSNNLTDKVRAVLDRTRALEKELQQLKDQQAAQESASLSSKAKMVNGVQLLVSQLD- 796

Query: 872 GLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAAL 931
            ++A  +R  V  +  Q G  ++V +T    +K  + AGV +  D + +++  E +    
Sbjct: 797 NVEAKMLRTMVDDLKNQLGSAIIVLAT-TADDKVSLIAGVTK--DLTDRVKAGELIGNVA 853

Query: 932 QPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           Q + G+ G G+  +A   GTD + +  A+D    + A KL
Sbjct: 854 QQVGGKGG-GRPDMAQAGGTDVSALPAALDSVEAWVASKL 892


>gi|332882439|ref|ZP_08450064.1| alanine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|357046933|ref|ZP_09108548.1| alanine--tRNA ligase [Paraprevotella clara YIT 11840]
 gi|332679609|gb|EGJ52581.1| alanine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|355530135|gb|EHG99552.1| alanine--tRNA ligase [Paraprevotella clara YIT 11840]
          Length = 871

 Score =  608 bits (1569), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 365/930 (39%), Positives = 518/930 (55%), Gaps = 81/930 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++RD+F KFFE K H+   S+P+V  +DPTL+F NAGMNQ+K I LG     ++    
Sbjct: 3   ANEIRDSFVKFFESKGHLIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNRPATSK---- 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAIEWAWE L  V 
Sbjct: 59  -RCTDSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAIEWAWEYLVDVL 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           ++    LYAT F G  + GL  DNEA   W KFLPA  ++     DNFWEMG TGPCGPC
Sbjct: 118 KIDKSNLYATVFEGSPEEGLERDNEAASYWEKFLPADHIINGNKHDNFWEMGATGPCGPC 177

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + A      LVN D+P  IEIWN+VF+Q+NR++D +L+PLPAK +DTG+
Sbjct: 178 SEIHIDLRPEEEKAKVPGRELVNKDNPLVIEIWNLVFMQYNRKADQTLEPLPAKVIDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL +++Q K SNYDTDVF PI   I   +  R        +DA K D+A RVVADH+
Sbjct: 238 GFERLCAVMQGKRSNYDTDVFQPIIKVIGDLSDCRY------GEDAKK-DVAMRVVADHL 290

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++F+IADG  PGN    YV+RRILRRAVRY    L  ++ F   L+ ++V+ MG  +P
Sbjct: 291 RTIAFSIADGQLPGNAKAGYVIRRILRRAVRYAYTFLGQKEAFMYKLLPVLVQEMGKSYP 350

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ--GK-VLSGQDAFILWDTYGF 471
           EL+ ++  I +++  EE SF +TL  GI    +   + +  GK V+ G +AF L+DTYGF
Sbjct: 351 ELEAQKVLISKVMKEEEDSFLRTLETGIRLLDRVMAETRAAGKTVIDGVEAFTLFDTYGF 410

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E G+ VD E F+  M + +ER+R+A   + G  +V+    T         
Sbjct: 411 PLDLTELICRENGMAVDEETFHTEMQKQKERARNAAAVETGDWVVVKEGET--------- 461

Query: 532 ATDDSFKFIWFQDHKSVI----KAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFD 587
                FK   + +H+  I    K       F +         IVL  + FYAE GGQ+ D
Sbjct: 462 ----EFKGWDYTEHECHILRYRKVTQKKQTFYQ---------IVLDYTPFYAEMGGQVGD 508

Query: 588 EGFIEGLFGSFYVRNVQIYGGFVIHIG-SLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
            G +     +  + + +      +HI  +L E         + +  VD D R     NHT
Sbjct: 509 RGVLCSEHETIEIVDTKRENNLPVHIAKTLPEHP-----EADFMACVDTDLRAASEANHT 563

Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD 706
           CTH+L+ ALR VLG+HV+QKGS+V PE LRFDFSH + V  E LR +E IVN +I+ +L 
Sbjct: 564 CTHLLDQALRTVLGEHVEQKGSLVTPEYLRFDFSHFQKVTDEQLREVERIVNAKIREDLP 623

Query: 707 VFS-KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
           +   ++  + +AK +  + A+FGE Y D VRVV  G                  S E CG
Sbjct: 624 LQDHRDMPIEKAKELGAI-ALFGEKYGDRVRVVQFGD-----------------SVEFCG 665

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVT----TGLAYKAFEAACSLEKEVDDASKI 821
           G H  +T       +LSE  +A GIRRI A+T      + Y   +    L    ++A  +
Sbjct: 666 GCHAKSTGRIGMMKILSESSVAAGIRRIEAITGEKVENMLYTLQDLTNELRTMFNNAPDV 725

Query: 822 EGSLLEKNQVRKAQKKVAEENLQK--AVKVATETAEAAASNGKPFCISRVEVGLDAAAVR 879
           + ++L+  +     KK  EE++++  A   A   ++AA  NG    + R  + + A  V+
Sbjct: 726 KAAILKSIEENATLKKQIEESMKEKAAQAKARIVSQAAIVNG--VTLYRGILPMPADLVK 783

Query: 880 EAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCG 939
           +   + +       +V        K ++ A   +   ++  + V + +  A + ++G  G
Sbjct: 784 DMAFQ-LRNGAEDALVIIGSLHEGKPMLTAAASDNMVKAHGMNVGKIIREAAKLIQG-GG 841

Query: 940 KGKGGLASGQGTDAAQVTPAMDLAAEFAAM 969
            G+   A+  G +A  ++ A+D   E AA+
Sbjct: 842 GGQPHFATAGGKNADGLSAAVDKFVELAAL 871


>gi|385790368|ref|YP_005821491.1| alanine--tRNA ligase [Fibrobacter succinogenes subsp. succinogenes
           S85]
 gi|302327820|gb|ADL27021.1| alanine--tRNA ligase [Fibrobacter succinogenes subsp. succinogenes
           S85]
          Length = 882

 Score =  608 bits (1569), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 348/805 (43%), Positives = 476/805 (59%), Gaps = 80/805 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + +VR++F KFFE K H+  +SSPVVP +DPTL+F NAGMNQ+K IFLG  +P       
Sbjct: 7   SAQVRESFIKFFESKGHLFVRSSPVVPHDDPTLMFTNAGMNQFKAIFLGD-NPKG----W 61

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            RACN+QKC+R  GKHNDLD VG+D YHHTFFEMLGNWSFGDY+K EAI WAWELLT+V+
Sbjct: 62  KRACNSQKCLRVSGKHNDLDVVGRDNYHHTFFEMLGNWSFGDYYKKEAISWAWELLTEVW 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIW--LKFLPASRVLPFGCKDNFWEMGDTGPCG 237
           +LP +RL+AT +          D+EA  IW  +  LP  R++ F    NFWEMGDTGPCG
Sbjct: 122 KLPKERLFATVY--------QDDDEAWQIWKDVSGLPDDRIMRFDAHSNFWEMGDTGPCG 173

Query: 238 PCSEIHYDRTGN--------RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKH 289
           PCSEIHYDR G+        +D    VN ++   IEIWN VF+Q+ R SDGSL PL AK+
Sbjct: 174 PCSEIHYDR-GDLATQAETFKDPIKGVNGENDRYIEIWNNVFMQYERVSDGSLIPLKAKN 232

Query: 290 VDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRV 349
           VDTG+GFER+ +ILQ K SNYDTDVF PI   I + +G     G+ G          +RV
Sbjct: 233 VDTGMGFERICAILQGKTSNYDTDVFTPIIAKIAELSGVPYNDGEAGT--------PHRV 284

Query: 350 VADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVM 409
           +ADHIR +SFAIADG+ P NEGR YVLRRILRRA R+ + +L  +  F   LV ++   M
Sbjct: 285 IADHIRAISFAIADGALPSNEGRGYVLRRILRRASRF-ARLLGQKKPFICQLVQVLADTM 343

Query: 410 GDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDT 468
           GD FPE+++R+  +  +I +EE SF +TL  G+E+F   + ++ +G  + G   F+L+DT
Sbjct: 344 GDAFPEIRERKEFVASVIKSEEESFIRTLDAGLERFAAISAELKKGDKIPGDKVFLLYDT 403

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRS--AQNKQAGGAIVMDADATAALH 526
           YGFP DLT ++AEE+GLL+D EG+   M+E +ER+R+   Q     G       + A+ +
Sbjct: 404 YGFPPDLTGILAEEKGLLIDEEGYEKCMNEQKERARANMKQGINTMGTEGWTQYSEASTN 463

Query: 527 KRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
             G   +    K + +++ K V+                    IVL +S FYAE GGQ+ 
Sbjct: 464 FVGYELSACETKVVRWREDKGVLS-------------------IVLETSPFYAEMGGQVG 504

Query: 587 DEGFIEG------LFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           D+G +        +F +  V +  +  G V+  G   E     ++G   +  VD DRR  
Sbjct: 505 DKGTLVSADLEIQVFDTVKVNDTALCRGKVVK-GEANEK----TMGAVFMATVDNDRRAD 559

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           I  NH+ TH+L  ALREVLG HV Q+GS V  E LRFDFSH   +  E ++++E IVN +
Sbjct: 560 IRKNHSATHLLQAALREVLGTHVQQQGSFVSNELLRFDFSHFNAMTAEEIQKVEDIVNAK 619

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I   L V +    + EAK  +G  A+FGE Y D VRVV +G               +  S
Sbjct: 620 IMECLPVHTDVMDVDEAKA-SGAMALFGEKYGDKVRVVKMG------------DAGVEFS 666

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK 820
            ELCGG H+ NT       ++SE  ++ G+RRI AV+   A     A   +   + +  +
Sbjct: 667 RELCGGLHVQNTGNIGMVKIVSESSVSAGVRRIEAVSGRGALSLLRAGTQILNALREQLR 726

Query: 821 I-EGSLLEKNQVRKAQKKVAEENLQ 844
             +  +L++ Q   A+ +  E++LQ
Sbjct: 727 CKDAEVLDRIQQTFAKTQNLEKSLQ 751


>gi|323492975|ref|ZP_08098113.1| alanyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
 gi|323312806|gb|EGA65932.1| alanyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
          Length = 860

 Score =  608 bits (1568), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 372/915 (40%), Positives = 515/915 (56%), Gaps = 88/915 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR+ F KFFE K H    SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRNAFLKFFESKGHQIVDSSSLVPHNDPTLLFTNAGMNQFKDCFLGA-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT+  +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIAFAWEFLTETLQL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLKF--LPASRVLPFGCK--------DNFWEMG 231
           P DRL  T +          D+EA +IW K   +PA R++  G K        DNFW MG
Sbjct: 122 PKDRLLVTVY--------ETDDEAFEIWNKTVGVPADRIVRIGDKEGGKQYESDNFWTMG 173

Query: 232 DTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
           DTGPCGPC+EI YD      G R        D    IEIWN VF+QFNR +DG+++PLP 
Sbjct: 174 DTGPCGPCTEIFYDHGEHIWGGRPGTP--EEDGDRFIEIWNNVFMQFNRHADGTMEPLPK 231

Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
             VDTG+G ER+++I+Q   SNY+ DVF  +  A  +  G    S           + + 
Sbjct: 232 PAVDTGMGIERISAIMQGVHSNYEIDVFQKLIKAAAETIGYEDLS-----------NQSL 280

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RV+ADHIR+ SF I DG  P NEGR YVLRRI+RRAVR+G++ L A+  FF+ LV ++ +
Sbjct: 281 RVIADHIRSCSFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAKGVFFHKLVGVLAE 339

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWD 467
           VMG    ELK+++A + +++  EE +FG+TL +G+    +A  ++ GKVL G+  F L+D
Sbjct: 340 VMGTAGEELKKQQAVVEKVLRIEEENFGRTLERGMAILNEALDNLDGKVLDGETVFKLYD 399

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
           TYGFP DLT  +A ER   +D EGF  AM+E R+R+R A      G    D +AT     
Sbjct: 400 TYGFPADLTNDVARERDFAIDEEGFEKAMEEQRQRAREA------GQFGTDYNAT----- 448

Query: 528 RGVLATDDSFKFIWFQDHK--SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
              + T+   +F  +   +  S +  I+   E  ES+  G++  I+L  + FYAE GGQ 
Sbjct: 449 ---IKTEAETEFCGYTGTQGNSNVAEIFVEGEAAESLSAGDKAIIILGETPFYAESGGQC 505

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D G ++   G F V + Q  G  + H G L EG    + G+EV   VD +RR  I+ NH
Sbjct: 506 GDAGVLKTESGLFKVEDTQKLGNAIAHHGVLAEGV--LAKGDEVEAVVDAERRASISLNH 563

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+L+ ALR VLG+HV QKGS+V PE LRFDFSH + V P  L+ +E +VN Q++   
Sbjct: 564 SATHLLHAALRTVLGEHVTQKGSLVKPENLRFDFSHLEAVTPAELKEVERLVNAQVRRNH 623

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    +  AK   G  A+FGE Y D VRV+++G                  S ELCG
Sbjct: 624 VIETNVMDIESAKQ-KGAMALFGEKYDDEVRVLSMG----------------EFSTELCG 666

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSL 825
           G H SNT +   F + SE GIA GIRRI AVT   A  A EA  +  +E    S  +   
Sbjct: 667 GIHASNTGDIGLFKITSEGGIAAGIRRIEAVTGEAALDAIEAQQAKYEEKLAESATKAKS 726

Query: 826 LEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKV 885
           LEK +++K + K+A      A + A    +A   NG    I+ +E G D+  +R  V  +
Sbjct: 727 LEK-EIQKLKDKMA------AAESANIMGKAQEINGVKVLIAGME-GADSKNLRTMVDDI 778

Query: 886 IEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGL 945
             Q G  V++ + +    K  + AGV +  D   +++  + +    + + G+ G G+  +
Sbjct: 779 KNQMGSGVVMLA-NVNDGKIGLIAGVTK--DLIGKVKAGDLVKMVAEQVGGKGG-GRPDM 834

Query: 946 ASGQGTDAAQVTPAM 960
           A   G+D   +  A+
Sbjct: 835 AQAGGSDVDALPAAI 849


>gi|146281753|ref|YP_001171906.1| alanyl-tRNA synthetase [Pseudomonas stutzeri A1501]
 gi|145569958|gb|ABP79064.1| alanyl-tRNA synthetase [Pseudomonas stutzeri A1501]
          Length = 900

 Score =  608 bits (1568), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 377/936 (40%), Positives = 531/936 (56%), Gaps = 88/936 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F +FFE+K H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 29  SAEIREAFLRFFEEKGHTRVASSSLIPANDPTLLFTNAGMNQFKDCFLGL-----EKRAY 83

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           TRA  +QKC+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT  K
Sbjct: 84  TRATTSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWEFLTSDK 143

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFW 228
             +LP ++L+ T +        A D+EA DIW K   +PA R++  G         DNFW
Sbjct: 144 WLKLPKEKLWVTVY--------ATDDEAYDIWTKEVGVPAERMVRIGDNKGAPYASDNFW 195

Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
            MGDTGPCGPC+EI +D   +           D    IEIWN VF+QFNR +DG L PLP
Sbjct: 196 AMGDTGPCGPCTEIFFDHGEHIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLP 255

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
           A  VDTG+G ER++++LQ+  SNY+ D+F  + +A   A G            A++   +
Sbjct: 256 APSVDTGMGLERISAVLQHVNSNYEIDLFQSLLNAAADAIGC-----------ANEGQAS 304

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            +VVADHIR+  F IADG  P NEGR YVLRRI+RRA R+G++ L A+  FF+ +V  +V
Sbjct: 305 LKVVADHIRSCGFLIADGVTPSNEGRGYVLRRIIRRACRHGNK-LGAKGSFFHRIVAALV 363

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
             MGD FPELKQ++AHI  ++  EE  F KTL +G++  ++    + G V+ G+  F L+
Sbjct: 364 AEMGDAFPELKQQQAHIERVLKNEEEQFAKTLEQGLKILEQDLAGLAGSVIPGEVVFKLY 423

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFP+DLT  +A ER L +D EGF   M   RER+RSA       A  MD ++     
Sbjct: 424 DTYGFPVDLTGDIARERNLTLDEEGFEREMQAQRERARSAS------AFGMDYNS----- 472

Query: 527 KRGVLATDDSFKFIWFQDHKSVIK--AIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
              ++  +   +FI +Q      K  A++     ++S+  G E  +VL  + FYAE GGQ
Sbjct: 473 ---LVKVEGETRFIGYQGTSGSGKVLALFKQGMLVDSLSAGEEGVVVLDQTPFYAESGGQ 529

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           I D G++E     F VR+    GG  +H G +   +G  + G +V   VD   R+  A N
Sbjct: 530 IGDCGYLEAQGLRFDVRDTSKAGGAFLHHGIVD--SGTLTTGAQVEATVDASVRQATALN 587

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ ALRE+LG+HV QKGS+V  ++LRFDFSH + + PE LR +E  VN +I+  
Sbjct: 588 HSATHLLHAALREILGEHVSQKGSLVDSQRLRFDFSHFEAIKPEQLRALEDRVNAEIRRN 647

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
             V  +E  +  AK   G  A+FGE Y D VRV+ +G                  S ELC
Sbjct: 648 SAVEIEETDIDTAKA-KGAMALFGEKYGDTVRVLTMGG---------------GFSVELC 691

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVT--TGLAY------KAFEAACSLEKEVD 816
           GGTH++ T +   F + SE G+A G+RRI AVT    LAY      +  +AA  ++   +
Sbjct: 692 GGTHVNRTGDIGLFKITSEGGVAAGVRRIEAVTGAPALAYLNDAEEQLKQAASLVKGSRE 751

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAAS-NGKPFCISRVEVGLDA 875
           +     G LLE+N  R+ +K++ +   + A     + A +A   NG     +R + GLD 
Sbjct: 752 NLLDKLGGLLERN--RQLEKELEQLKAKAASAAGNDLAASAVEVNGIRVLAARQD-GLDG 808

Query: 876 AAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLK 935
            A+   V ++  + G  V++    +  +K V+ AGV +  D + +L+  + L        
Sbjct: 809 KALLALVDQLKNKLGSAVILLGGVQ-DDKVVLVAGVTQ--DLTSRLKAGD-LMRQAAAAV 864

Query: 936 GRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           G  G G+  +A G GTDAA++  A+ LA  FA   L
Sbjct: 865 GGKGGGRPDMAQGGGTDAAKLDEALALALPFAQQAL 900


>gi|205830255|sp|A4VJB3.2|SYA_PSEU5 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
          Length = 874

 Score =  608 bits (1568), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 377/936 (40%), Positives = 531/936 (56%), Gaps = 88/936 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F +FFE+K H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLRFFEEKGHTRVASSSLIPANDPTLLFTNAGMNQFKDCFLGL-----EKRAY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           TRA  +QKC+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT  K
Sbjct: 58  TRATTSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWEFLTSDK 117

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFW 228
             +LP ++L+ T +        A D+EA DIW K   +PA R++  G         DNFW
Sbjct: 118 WLKLPKEKLWVTVY--------ATDDEAYDIWTKEVGVPAERMVRIGDNKGAPYASDNFW 169

Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
            MGDTGPCGPC+EI +D   +           D    IEIWN VF+QFNR +DG L PLP
Sbjct: 170 AMGDTGPCGPCTEIFFDHGEHIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLP 229

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
           A  VDTG+G ER++++LQ+  SNY+ D+F  + +A   A G            A++   +
Sbjct: 230 APSVDTGMGLERISAVLQHVNSNYEIDLFQSLLNAAADAIGC-----------ANEGQAS 278

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            +VVADHIR+  F IADG  P NEGR YVLRRI+RRA R+G++ L A+  FF+ +V  +V
Sbjct: 279 LKVVADHIRSCGFLIADGVTPSNEGRGYVLRRIIRRACRHGNK-LGAKGSFFHRIVAALV 337

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
             MGD FPELKQ++AHI  ++  EE  F KTL +G++  ++    + G V+ G+  F L+
Sbjct: 338 AEMGDAFPELKQQQAHIERVLKNEEEQFAKTLEQGLKILEQDLAGLAGSVIPGEVVFKLY 397

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFP+DLT  +A ER L +D EGF   M   RER+RSA       A  MD ++     
Sbjct: 398 DTYGFPVDLTGDIARERNLTLDEEGFEREMQAQRERARSAS------AFGMDYNS----- 446

Query: 527 KRGVLATDDSFKFIWFQDHKSVIK--AIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
              ++  +   +FI +Q      K  A++     ++S+  G E  +VL  + FYAE GGQ
Sbjct: 447 ---LVKVEGETRFIGYQGTSGSGKVLALFKQGMLVDSLSAGEEGVVVLDQTPFYAESGGQ 503

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           I D G++E     F VR+    GG  +H G +   +G  + G +V   VD   R+  A N
Sbjct: 504 IGDCGYLEAQGLRFDVRDTSKAGGAFLHHGIVD--SGTLTTGAQVEATVDASVRQATALN 561

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ ALRE+LG+HV QKGS+V  ++LRFDFSH + + PE LR +E  VN +I+  
Sbjct: 562 HSATHLLHAALREILGEHVSQKGSLVDSQRLRFDFSHFEAIKPEQLRALEDRVNAEIRRN 621

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
             V  +E  +  AK   G  A+FGE Y D VRV+ +G                  S ELC
Sbjct: 622 SAVEIEETDIDTAKA-KGAMALFGEKYGDTVRVLTMGG---------------GFSVELC 665

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVT--TGLAY------KAFEAACSLEKEVD 816
           GGTH++ T +   F + SE G+A G+RRI AVT    LAY      +  +AA  ++   +
Sbjct: 666 GGTHVNRTGDIGLFKITSEGGVAAGVRRIEAVTGAPALAYLNDAEEQLKQAASLVKGSRE 725

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAAS-NGKPFCISRVEVGLDA 875
           +     G LLE+N  R+ +K++ +   + A     + A +A   NG     +R + GLD 
Sbjct: 726 NLLDKLGGLLERN--RQLEKELEQLKAKAASAAGNDLAASAVEVNGIRVLAARQD-GLDG 782

Query: 876 AAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLK 935
            A+   V ++  + G  V++    +  +K V+ AGV +  D + +L+  + L        
Sbjct: 783 KALLALVDQLKNKLGSAVILLGGVQ-DDKVVLVAGVTQ--DLTSRLKAGD-LMRQAAAAV 838

Query: 936 GRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           G  G G+  +A G GTDAA++  A+ LA  FA   L
Sbjct: 839 GGKGGGRPDMAQGGGTDAAKLDEALALALPFAQQAL 874


>gi|254507377|ref|ZP_05119512.1| alanyl-tRNA synthetase [Vibrio parahaemolyticus 16]
 gi|219549633|gb|EED26623.1| alanyl-tRNA synthetase [Vibrio parahaemolyticus 16]
          Length = 860

 Score =  608 bits (1567), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 376/917 (41%), Positives = 517/917 (56%), Gaps = 92/917 (10%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR+ F KFFE K H    SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRNAFLKFFESKGHQIVDSSSLVPHNDPTLLFTNAGMNQFKDCFLGA-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT+  +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIAFAWEFLTETLKL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           P +RL  T +          D+EA DIW K   +PA R++  G K        DNFW MG
Sbjct: 122 PKERLLVTVY--------ETDDEAFDIWNKKVGVPADRIVRIGDKEGGKQFESDNFWTMG 173

Query: 232 DTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
           DTGPCGPC+EI YD      G R        D    IEIWN VF+QFNR +DG+++PLP 
Sbjct: 174 DTGPCGPCTEIFYDHGEHIWGGRPGTP--EEDGDRFIEIWNNVFMQFNRHADGTMEPLPK 231

Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
             VDTG+G ER+++I+Q   SNY+ DVF  +  A  +  G    S           + + 
Sbjct: 232 PAVDTGMGIERISAIMQGVHSNYEIDVFQKLIKAAAEVVGCEDLS-----------NQSL 280

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RV+ADHIR+ SF IADG  P NEGR YVLRRI+RRAVR+G++ L A+  FF+ LV ++ +
Sbjct: 281 RVIADHIRSCSFLIADGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAKGVFFHKLVGVLAE 339

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWD 467
           VMG    ELK+++A + +++  EE +FG+TL +G+    +A   ++GK L G+  F L+D
Sbjct: 340 VMGSAADELKKQQAVVEKVLRIEEENFGRTLERGMVILNEALDALEGKELDGETVFKLYD 399

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
           TYGFP DLT  +A ER   +D  GF  AM+E R+R+R A      G    D +AT     
Sbjct: 400 TYGFPADLTNDVARERDFTIDEAGFEKAMEEQRQRAREA------GQFGTDYNAT----- 448

Query: 528 RGVLATDDSFKFIWF--QDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
              + T+   +F  +     KS +  I+   E  ES+  G++  I+L  + FYAE GGQ 
Sbjct: 449 ---IKTEAETEFCGYTGTQGKSNVAEIFVEGEVAESLSAGDKAIIILGETPFYAESGGQC 505

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D G ++   G F V + Q  G  + H G L EG    + G+EV   VD +RR  I+ NH
Sbjct: 506 GDAGVLKTESGLFKVEDTQKLGNAIAHHGVLAEGV--LAKGDEVEAIVDAERRASISLNH 563

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+L+ ALR+VLG+HV QKGS+V PE LRFDFSH + V P  L+ +E +VN Q++   
Sbjct: 564 SATHLLHAALRQVLGEHVTQKGSLVKPENLRFDFSHLEAVTPTELKEVERLVNAQVRRNH 623

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    +  AK   G  A+FGE Y D VRV+++G                  S ELCG
Sbjct: 624 VIETNVMDIESAKQ-KGAMALFGEKYDDEVRVLSMG----------------EFSTELCG 666

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFE--AACSLEKEVDDASKIEG 823
           G H SNT +   F + SE GIA GIRRI AVT   A  A E   A   EK V+ A K + 
Sbjct: 667 GIHASNTGDIGLFKITSEGGIAAGIRRIEAVTGEAALDAIEEQQAKYEEKLVESAQKAKS 726

Query: 824 SLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVL 883
             LEK +++K + K+A      A + A    +    NG    I+ +E G D   +R  V 
Sbjct: 727 --LEK-EIQKLKDKMA------AAESANIMGKVQEINGTKVLIAALE-GADNKNLRTMVD 776

Query: 884 KVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKG 943
            +  Q G  V++ + +   +K  + AGV +  D   +++  + +    + + G+ G G+ 
Sbjct: 777 DIKNQVGSGVILLA-NINGDKIGLIAGVTK--DLIGKVKAGDLVKMVAEQVGGKGG-GRP 832

Query: 944 GLASGQGTDAAQVTPAM 960
            +A   GTD A +  A+
Sbjct: 833 DMAQAGGTDVAALPEAI 849


>gi|205830246|sp|A8GA09.2|SYA_SERP5 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
          Length = 875

 Score =  608 bits (1567), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 362/934 (38%), Positives = 529/934 (56%), Gaps = 89/934 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSK--L 119
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG       L K   
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPDNDPTLLFTNAGMNQFKDVFLG-------LDKRAY 59

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           +RA  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI +AWELLT   
Sbjct: 60  SRATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAISYAWELLTGEN 119

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFW 228
            + LP +RL+ T +          D+EA DIW + +  PA R++  G         DNFW
Sbjct: 120 WFNLPKERLWVTVY--------ETDDEAFDIWQQQIGVPAERIIRIGDNKGGAFASDNFW 171

Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
           +MGDTGPCGPC+EI YD   +           D    IEIWN+VF+QFNR+SDG++ PLP
Sbjct: 172 QMGDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNLVFMQFNRQSDGTMLPLP 231

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
              VDTG+G ER+ ++LQ+  SNY+ D+F  +  A+ + TGA     K           +
Sbjct: 232 KPSVDTGMGLERIAAVLQHVNSNYEIDLFSKLIAAVAKVTGATDLDNK-----------S 280

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            RV+ADHIR+ +F ++DG  P NEGR YVLRRI+RRAVR+G+ +L A+D FF  LV  ++
Sbjct: 281 LRVIADHIRSCAFLVSDGVTPSNEGRGYVLRRIIRRAVRHGN-MLGAKDTFFYKLVAPLI 339

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
           +VMG    ELK++++ + +++  EE  F +TL +G+    +   ++QG  L G+ AF L+
Sbjct: 340 EVMGPAADELKRQQSLVEQVLKTEEDQFARTLERGLTLLDEELANLQGDTLDGETAFRLY 399

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFP+DLT  +  ERGL VD  GF  AM+  R R+R +            AD  + + 
Sbjct: 400 DTYGFPVDLTADVCRERGLKVDEAGFEQAMEAQRRRARESSG--------FGADYNSMIR 451

Query: 527 KRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
             G       F     +  +S + A++   + +  +  G E  +VL  + FY E GGQ+ 
Sbjct: 452 VDGA----SQFSGYDHEQQQSTVTALFRDGQPVNEIHAGEEAVVVLDETPFYGESGGQVG 507

Query: 587 DEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
           D+G ++     F V + Q YG  + H G L+ G+    V + V  K+D  RR  I  NH+
Sbjct: 508 DKGVLKAANADFEVSDTQKYGQAIGHQGKLSHGS--LKVNDRVDAKIDTVRRNRIRLNHS 565

Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD 706
            TH+L+ ALR+ LG+HV QKGS+V  + LRFDFSH + + PE +R +E +VN+QI+  L 
Sbjct: 566 ATHLLHAALRQTLGEHVAQKGSLVNDKYLRFDFSHFEAMKPEQIRTVEDLVNQQIRRNLP 625

Query: 707 VFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGG 766
           V ++   L +AK   G  A+FGE Y D VRV+ +G                  S ELCGG
Sbjct: 626 VQTEVMALDDAKG-KGAMALFGEKYDDNVRVLTMG----------------DFSTELCGG 668

Query: 767 THLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEG--- 823
           TH S T +   F +LSE G A GIRRI AVT   A         L ++V  A  ++G   
Sbjct: 669 THASRTGDIGLFRILSESGTAAGIRRIEAVTGDGAIATLHQQNDLLQDV--AHLVKGDSN 726

Query: 824 SLLEK-----NQVRKAQKKVAE-ENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAA 877
           +L +K     ++ R  +K++ + ++ Q A + A+ +++A   NG    +S+++  ++A  
Sbjct: 727 NLTDKVRAVLDRTRALEKELQQLKDQQAAQESASLSSKAKMVNGVQLLVSQLD-NVEAKM 785

Query: 878 VREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGR 937
           +R  V  +  Q G  ++V +T    +K  + AGV +  D + +++  E +    Q + G+
Sbjct: 786 LRTMVDDLKNQLGSAIIVLAT-TADDKVSLIAGVTK--DLTDRVKAGELIGNVAQQVGGK 842

Query: 938 CGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
            G G+  +A   GTD + +  A+D    + A KL
Sbjct: 843 GG-GRPDMAQAGGTDVSALPAALDSVEAWVASKL 875


>gi|90412109|ref|ZP_01220116.1| alanyl-tRNA synthetase [Photobacterium profundum 3TCK]
 gi|90327087|gb|EAS43466.1| alanyl-tRNA synthetase [Photobacterium profundum 3TCK]
          Length = 873

 Score =  608 bits (1567), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 369/932 (39%), Positives = 521/932 (55%), Gaps = 87/932 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EIRRAFLAFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDTFLGI-----EKRSYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI++AWE LT V  L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKQDAIKYAWEFLTDVLGL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFWEMGD 232
           P DRL  T +          D+EA DIW K +  PA R++  G         DNFW+MGD
Sbjct: 122 PQDRLLVTIY--------ETDDEAFDIWNKEMGIPADRIVRIGDNKGAPYASDNFWQMGD 173

Query: 233 TGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           TGPCGPC+EI YD      G R        D    IEIWN VF+QFNR++DG+++PLP  
Sbjct: 174 TGPCGPCTEIFYDHGEHIWGGRPGTP--EEDGDRFIEIWNNVFMQFNRQADGTMEPLPKP 231

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ +I+Q   SNY+ D+F  +     +  G    S           + + R
Sbjct: 232 SVDTGMGIERIAAIMQGVHSNYEIDIFQTLIKKSAEVIGYEDLS-----------NQSLR 280

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           VVADHIR+ +F I DG  P NEGR YVLRRI+RRAVR+G++ L A   FF  L   + ++
Sbjct: 281 VVADHIRSCAFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGATGAFFYKLAGPLAEI 339

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    ELK+++A + +++  EE +FG+TL +G+     A  ++ GK L G+  F L+DT
Sbjct: 340 MGTAGEELKKQQALVEKVLKIEEDNFGRTLDRGLTILNDALDNLSGKELDGETVFKLYDT 399

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP DLT  +A ER   +D EGFNNAM+  R+R+R A      G   +D + +      
Sbjct: 400 YGFPADLTNDVARERDFTIDEEGFNNAMEAQRQRAREA------GKFGVDYNES------ 447

Query: 529 GVLATDDSFKFIWFQDH--KSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
             +  D + +F  +     +S I A+Y   E ++S++ G +  I+L ++ FYAE GGQ  
Sbjct: 448 --IKVDVNTEFCGYTGTAAQSRIIALYRDGEAVDSILAGEDALIILDNTPFYAESGGQCG 505

Query: 587 DEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
           D G +      F V + Q +G  + H GSL +GA   ++G+++  +VD  RR  I  NH+
Sbjct: 506 DAGVLTAESTMFNVTDTQKFGAAIGHQGSLVQGA--LNIGDKLEAQVDVARRAAITLNHS 563

Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD 706
            TH+L+ ALR +LG+HV QKGS+V  + LRFDFS+ + V PE LR IE +VNEQI+    
Sbjct: 564 ATHLLHSALRNLLGEHVAQKGSLVKADALRFDFSNLEAVKPEQLREIERVVNEQIRLNHS 623

Query: 707 VFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGG 766
           + +    +  AK   G  A+FGE Y D VRV+++G                  S ELCGG
Sbjct: 624 IDTNIMDIESAKQ-KGAMALFGEKYDDEVRVLSMGE----------------FSTELCGG 666

Query: 767 THLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIE-GSL 825
            H  NT +   F + SE GIA GIRRI AVT   A  A  A  +L  E     K +  S+
Sbjct: 667 IHAKNTGDIGLFKITSEGGIAAGIRRIEAVTGAAAIDALHAQEALLSETASIVKSDAASV 726

Query: 826 LEKNQVRKAQKKVAEENLQKAVK--VATETA----EAAASNGKPFCISRVEVGLDAAAVR 879
             K     A  K  E+++Q+      A E+A    +A   NG    I++++ G D  A+R
Sbjct: 727 ATKVSALLAHSKQLEKDIQQLQDKLAAQESAGLLDQAKEINGVKVLITQLD-GADNKALR 785

Query: 880 EAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCG 939
             + ++  + G  ++V   + + +K  +  GV +  D + +++  E +    Q + G+ G
Sbjct: 786 GMLDEIKNKLGSGIVVLG-NVSGDKVGLIVGVTK--DLTGKVKAGELVNMVAQQVGGKGG 842

Query: 940 KGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
            G+  +A   GTDAA +  A++    +   KL
Sbjct: 843 -GRPDMAQAGGTDAAALPAALESVTPWLTEKL 873


>gi|270294506|ref|ZP_06200708.1| alanyl-tRNA synthetase [Bacteroides sp. D20]
 gi|270275973|gb|EFA21833.1| alanyl-tRNA synthetase [Bacteroides sp. D20]
          Length = 872

 Score =  608 bits (1567), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 335/747 (44%), Positives = 440/747 (58%), Gaps = 61/747 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++RD+F  FFE K H    S+P+V  +DPTL+F NAGMNQ+K I LG        +K 
Sbjct: 4   ANEIRDSFKSFFESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGN-----HPAKY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWE L  V 
Sbjct: 59  KRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAWEYLVDVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +L    LYAT F G  + GL  DNEA   W +FLP   +L     DNFWEMGDTGPCGPC
Sbjct: 119 KLDPKDLYATVFEGSAEEGLERDNEAASYWEQFLPKDHILNGNKHDNFWEMGDTGPCGPC 178

Query: 240 SEIHYDRTGNRDAA-----SLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + A      LVN D P  IEIWN+VF+QFNR++DGSL+ LPAK +DTG+
Sbjct: 179 SEIHVDSRSEEEKAKVSGSQLVNKDHPQVIEIWNLVFMQFNRKADGSLEGLPAKVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF PI  AI    G      K G D  +K D+A RV+ADHI
Sbjct: 239 GFERLVRTLQGKTSNYDTDVFQPILKAIGDMAGK-----KYGED--EKSDIAMRVIADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++F+I DG  P N    YV+RRILRRAVRYG   L  +  F   L+ ++++ MG  +P
Sbjct: 292 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLIENMGAAYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ--GK-VLSGQDAFILWDTYGF 471
           EL  ++  I ++I  EE SF +TL  GI   +K   D +  GK  +SG+DAF L+DT+GF
Sbjct: 352 ELDAQKELIAKVIKEEEDSFLRTLETGIRLLEKTMADAKSTGKNEISGKDAFTLYDTFGF 411

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E G+  DI+ F+  M + ++R+R+A   + G  I +    T  +   G  
Sbjct: 412 PLDLTELILRENGMTADIKEFDAEMQQQKQRARNAAAIETGDWITLKEGTTEFV---GYD 468

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            T+     + ++  K   + +Y                IVL  + FYAE GGQ+ D G +
Sbjct: 469 YTEYETSILRYRQVKQKNQTLYQ---------------IVLDKTPFYAESGGQVGDTGVL 513

Query: 592 EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHML 651
              F +  V + +      IHI   T+          + C VD D+R   A NH+ TH+L
Sbjct: 514 VNEFETIEVVDTKKENNLPIHI---TKKLPEHMEAPMMAC-VDTDKRAACAANHSATHLL 569

Query: 652 NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS-K 710
           + ALREVLG+HV+QKGS+V P+ LRFDFSH + V  E +R++E IVN +I+A + +   +
Sbjct: 570 DAALREVLGEHVEQKGSLVTPDSLRFDFSHFQKVTDEEIRKVEHIVNAKIRANIPLKEYR 629

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
              + EAK + G  A+FGE Y D VRV+  G                  S E CGGTH++
Sbjct: 630 NIPIEEAKEL-GAIALFGEKYGDHVRVIQFGS-----------------SVEFCGGTHVA 671

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVT 797
            T       ++SE  +A G+RRI A T
Sbjct: 672 ATGNIGMVKIISESSVAAGVRRIEAYT 698


>gi|330502669|ref|YP_004379538.1| alanyl-tRNA synthetase [Pseudomonas mendocina NK-01]
 gi|328916955|gb|AEB57786.1| alanyl-tRNA synthetase [Pseudomonas mendocina NK-01]
          Length = 874

 Score =  607 bits (1566), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 376/931 (40%), Positives = 521/931 (55%), Gaps = 92/931 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F  FFE+K H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLSFFEEKGHTRVASSSLIPANDPTLLFTNAGMNQFKDCFLGL-----EKRAY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           TRA  +QKC+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT  K
Sbjct: 58  TRATTSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWEFLTSDK 117

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFW 228
              LP ++L+ T +        A D+EA DIW K   +P  R++  G         DNFW
Sbjct: 118 WLNLPKEKLWVTVY--------ATDDEAYDIWTKEVGIPTERMIRIGDNKGAPYASDNFW 169

Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
            MGDTGPCGPC+EI +D   +           D    IEIWN VF+QFNR +DG L PLP
Sbjct: 170 AMGDTGPCGPCTEIFFDHGEHIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLP 229

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
           A  VDTG+G ER++++LQ+  SNY+ D+F  +  A  +A G            A++   +
Sbjct: 230 APSVDTGMGLERISAVLQHVNSNYEIDLFQNLLAASAKAIGC-----------ANEGQAS 278

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            +VVADHIR+ SF IADG  P NEGR YVLRRI+RRA R+G++ L A+  FF  +V  +V
Sbjct: 279 LKVVADHIRSCSFLIADGVTPSNEGRGYVLRRIVRRACRHGNK-LGAKGSFFYQIVAALV 337

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
             MG+ FPELKQ++AHI  ++  EE  F KTL +G++  ++    +QG V+ G   F L+
Sbjct: 338 AEMGEAFPELKQQQAHIERVLKTEEEQFAKTLEQGLKILEQDLASLQGSVIPGDVVFKLY 397

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFP+DLT  +A ER L VD EGF   M+  RER+RSA       A  MD +A     
Sbjct: 398 DTYGFPVDLTADIARERELSVDEEGFEREMEAQRERARSAS------AFGMDYNA----- 446

Query: 527 KRGVLATDDSFKFIWFQ--DHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
              ++  D   +F+ ++       I A++     ++S+  G E  +VL  + FYAE GGQ
Sbjct: 447 ---LVKVDADTRFLGYEGTSGSGKIIALFKAGAAVDSLAEGEEGVVVLDQTPFYAESGGQ 503

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           I D G++EG    F VR+    GG  +H G + +G    +VG  V  +VD + R+  A N
Sbjct: 504 IGDCGYLEGAGVRFDVRDTTKAGGAFLHHGVVAKGG--LNVGASVKAEVDAEVRQATALN 561

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ ALR VLGDHV QKGS+V  ++LRFDFSH + + PE ++++E IVN  ++ E
Sbjct: 562 HSATHLLHEALRIVLGDHVQQKGSLVNSQRLRFDFSHFEAIKPEQIKQLEDIVNRVVR-E 620

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
                 E T  E     G  A+FGE Y D VRV+++G                  S ELC
Sbjct: 621 NSAVETEVTDIETAKAKGAMALFGEKYGDQVRVLSMGG---------------DFSVELC 665

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGS 824
           GGTH++ T +   F ++SE G+A G+RRI AVT   A      A    KE   AS ++GS
Sbjct: 666 GGTHVARTGDIGLFKIVSEGGVAAGVRRIEAVTGAAALAYLNGAEEQLKEA--ASLVKGS 723

Query: 825 LLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEV-----------GL 873
              ++ V      + E N Q   ++    A+AA++ G     S V+V           GL
Sbjct: 724 ---RDNVLDKLSALIERNRQLEKELEQLKAKAASAAGNDLAGSAVDVKGTKVLAARLDGL 780

Query: 874 DAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQP 933
           D  A+   V ++  + G  V++        K V+ AGV +  D + +L+  + L      
Sbjct: 781 DGKALLALVDQLKNKLGSAVILLG-GVFEEKVVLVAGVTQ--DLTSKLKAGD-LMRQAAA 836

Query: 934 LKGRCGKGKGGLASGQGTDAAQVTPAMDLAA 964
             G  G G+  +A G G DA ++  A+ LAA
Sbjct: 837 AVGGKGGGRPDMAQGGGVDAGKLDEALALAA 867


>gi|160891225|ref|ZP_02072228.1| hypothetical protein BACUNI_03673 [Bacteroides uniformis ATCC 8492]
 gi|317481112|ref|ZP_07940189.1| tRNA synthetase class II [Bacteroides sp. 4_1_36]
 gi|156859446|gb|EDO52877.1| alanine--tRNA ligase [Bacteroides uniformis ATCC 8492]
 gi|316902713|gb|EFV24590.1| tRNA synthetase class II [Bacteroides sp. 4_1_36]
          Length = 872

 Score =  607 bits (1566), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 333/747 (44%), Positives = 438/747 (58%), Gaps = 61/747 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++RD+F  FFE K H    S+P+V  +DPTL+F NAGMNQ+K I LG        +K 
Sbjct: 4   ANEIRDSFKSFFESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGN-----HPAKY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWE L  V 
Sbjct: 59  KRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAWEYLVDVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +L    LYAT F G  + GL  DNEA   W +FLP   +L     DNFWEMGDTGPCGPC
Sbjct: 119 KLDPKDLYATVFEGSAEEGLERDNEAASYWEQFLPKDHILNGNKHDNFWEMGDTGPCGPC 178

Query: 240 SEIHYDRTGNRDAA-----SLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + A      LVN D P  IEIWN+VF+QFNR++DGSL+ LPAK +DTG+
Sbjct: 179 SEIHVDSRSEEEKAKVPGSQLVNKDHPQVIEIWNLVFMQFNRKADGSLEGLPAKVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF PI  AI    G      K G D  +K D+A RV+ADHI
Sbjct: 239 GFERLVRTLQGKTSNYDTDVFQPILKAIGDMAGK-----KYGED--EKSDIAMRVIADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++F+I DG  P N    YV+RRILRRAVRYG   L  +  F   L+ ++++ MG  +P
Sbjct: 292 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLIENMGAAYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG---KVLSGQDAFILWDTYGF 471
           EL  ++  I ++I  EE SF +TL  GI   +K   D +      +SG+DAF L+DT+GF
Sbjct: 352 ELDAQKELIAKVIKEEEDSFLRTLETGIRLLEKTMADAKAAGKNEISGKDAFTLYDTFGF 411

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E G+  DI+ F+  M + ++R+R+A   + G  I +    T  +   G  
Sbjct: 412 PLDLTELILRENGMTADIKEFDAEMQQQKQRARNAAAIETGDWITLKEGTTEFV---GYD 468

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            T+     + ++  K   + +Y                IVL  + FYAE GGQ+ D G +
Sbjct: 469 YTEYETSILRYRQVKQKNQTLYQ---------------IVLDKTPFYAESGGQVGDTGVL 513

Query: 592 EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHML 651
              F +  V + +      IHI   T+          + C VD D+R   A NH+ TH+L
Sbjct: 514 VNEFETIEVVDTKKENNLPIHI---TKKLPEHMEAPMMAC-VDTDKRAACAANHSATHLL 569

Query: 652 NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS-K 710
           + ALREVLG+HV+QKGS+V P+ LRFDFSH + V  E +R++E IVN +I+A + +   +
Sbjct: 570 DAALREVLGEHVEQKGSLVTPDSLRFDFSHFQKVTDEEIRKVEHIVNAKIRANIPLKEYR 629

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
              + EAK + G  A+FGE Y D VRV+  G                  S E CGGTH++
Sbjct: 630 NIPIEEAKEL-GAIALFGEKYGDHVRVIQFGS-----------------SVEFCGGTHVA 671

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVT 797
            T       ++SE  +A G+RRI A T
Sbjct: 672 ATGNIGMVKIISESSVAAGVRRIEAYT 698


>gi|374386958|ref|ZP_09644451.1| alanine-tRNA ligase [Odoribacter laneus YIT 12061]
 gi|373223004|gb|EHP45361.1| alanine-tRNA ligase [Odoribacter laneus YIT 12061]
          Length = 877

 Score =  607 bits (1566), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 345/808 (42%), Positives = 470/808 (58%), Gaps = 80/808 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R  F  FF+ K+H    S+P+V  +DPTL+F NAGMNQ+K I LG  +     +K 
Sbjct: 3   SAEIRQKFLDFFKSKSHTIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNVN-----TKY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI +AWE LT+V 
Sbjct: 58  KRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKEEAIAYAWEFLTEVM 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
            L  DRLYAT F GD++ GL  D +AR  WL++LP  R+L    KDNFWEMGD GPCGPC
Sbjct: 118 HLEKDRLYATVFEGDKEDGLEADEDARKFWLRYLPEDRILYGNKKDNFWEMGDMGPCGPC 177

Query: 240 SEIHYDRTGNRD-----AASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SE+H D     +        LVN D+P  IEIWN+VF+QFNR++DGSL+ LP  HVDTG+
Sbjct: 178 SELHIDLRPEEERKLKPGRELVNKDNPLVIEIWNLVFMQFNRKADGSLENLPHTHVDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   +Q K SNYDTDVF PI D I   +G +   G       ++ D+A RVVADH+
Sbjct: 238 GFERLCMAVQGKTSNYDTDVFTPIIDKIAALSGLKYGEG-------EETDIAMRVVADHL 290

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++F+I DG  P N    YV+RRILRRAVRY    L  +D F   LV ++++VMG  +P
Sbjct: 291 RTIAFSITDGQLPSNVKAGYVIRRILRRAVRYAYTYLDQKDAFMYRLVPVLIEVMGKHYP 350

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK---VLSGQDAFILWDTYGF 471
           EL  ++  I ++I  EE +F +TL KGI+   +     + +    + G  AF L+DTYGF
Sbjct: 351 ELSTQQELIEKVIREEENAFLRTLDKGIKLLDRIIATTKSEDFLTVPGNVAFELYDTYGF 410

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E GL+V+   F   ++  + RSRSA              AT        L
Sbjct: 411 PLDLTELILREHGLVVNRREFKAELEAQKARSRSA--------------ATVNTDDWIEL 456

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEF----IESVVPGNEV--GIVLASSSFYAEQGGQI 585
             DD  +F+ +          YTG E        V+   +V   IV   + FY E GGQ+
Sbjct: 457 LNDDEQEFVGYD---------YTGMEVKIARYRKVMSKGKVLYHIVFNITPFYGEGGGQV 507

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D G++ G      V + +   G  IH+           + +  + +VD  RR+LIA NH
Sbjct: 508 GDTGWLCGKEEKIRVIDTKKENGLTIHVTEQLPA----DLTQSFMAQVDAHRRELIANNH 563

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           T TH+L+ ALREVLG HV+QKGS V  E+LRFDFSH + V  E LRR+ +IVN  I+  L
Sbjct: 564 TATHLLDHALREVLGAHVEQKGSYVGEERLRFDFSHFQKVTEEELRRVAAIVNRLIRQNL 623

Query: 706 DVFS-KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
            +   +   + EA+ +  + A+FGE Y D VRV+  G                  S ELC
Sbjct: 624 TLEEFRSIPMTEAQKMGAI-AIFGEKYGDLVRVIKYGD-----------------SIELC 665

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK---- 820
           GGTH+  T +   F ++SE  ++ G+RRI A+T   A +    + +L  E++   K    
Sbjct: 666 GGTHVRATGQIGFFKIMSESSVSAGVRRIEAITADKAEEYIVNSFALVGEIEKMFKSNRN 725

Query: 821 -IEG--SLLEKNQ-VRKAQKKVAEENLQ 844
            IE   +LL++N+ ++K  +K  EE+L+
Sbjct: 726 VIENITALLQENEGLKKDLEKFEEESLK 753


>gi|339493387|ref|YP_004713680.1| alanyl-tRNA synthetase [Pseudomonas stutzeri ATCC 17588 = LMG
           11199]
 gi|338800759|gb|AEJ04591.1| alanyl-tRNA synthetase [Pseudomonas stutzeri ATCC 17588 = LMG
           11199]
          Length = 874

 Score =  607 bits (1566), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 378/936 (40%), Positives = 530/936 (56%), Gaps = 88/936 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F +FFE+K H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLRFFEEKGHTRVASSSLIPANDPTLLFTNAGMNQFKDCFLGL-----EKRAY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           TRA  +QKC+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT  K
Sbjct: 58  TRATTSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWEFLTSDK 117

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFW 228
              LP ++L+ T +        A D+EA DIW K   +PA R++  G         DNFW
Sbjct: 118 WLNLPKEKLWVTVY--------ATDDEAYDIWTKEVGVPAERMVRIGDNKGAPYASDNFW 169

Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
            MGDTGPCGPC+EI +D   +           D    IEIWN VF+QFNR +DG L PLP
Sbjct: 170 AMGDTGPCGPCTEIFFDHGEHIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLP 229

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
           A  VDTG+G ER++++LQ+  SNY+ D+F  + +A   A G            A++   +
Sbjct: 230 APSVDTGMGLERISAVLQHVNSNYEIDLFQSLLNAAADAIGC-----------ANEGQAS 278

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            +VVADHIR+  F IADG  P NEGR YVLRRI+RRA R+G++ L A+  FF+ +V  +V
Sbjct: 279 LKVVADHIRSCGFLIADGVTPSNEGRGYVLRRIIRRACRHGNK-LGAKGSFFHRIVAALV 337

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
             MGD FPELKQ++AHI  ++  EE  F KTL +G++  ++    + G V+ G+  F L+
Sbjct: 338 AEMGDAFPELKQQQAHIERVLKNEEEQFAKTLEQGLKILEQDLAGLAGSVIPGEVVFKLY 397

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFP+DLT  +A ER L +D EGF   M   RER+RSA       A  MD ++     
Sbjct: 398 DTYGFPVDLTGDIARERNLTLDEEGFEREMQAQRERARSAS------AFGMDYNS----- 446

Query: 527 KRGVLATDDSFKFIWFQDHKSVIK--AIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
              ++  +   +FI +Q      K  A++     ++S+  G E  +VL  + FYAE GGQ
Sbjct: 447 ---LVKVEGETRFIGYQGTSGSGKVLALFKQGMLVDSLSAGEEGVVVLDQTPFYAESGGQ 503

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           I D G++E     F VR+    GG  +H G +   +G  + G +V   VD   R+  A N
Sbjct: 504 IGDCGYLEAQGLRFDVRDTSKAGGAFLHHGIVD--SGTLTTGAQVEATVDASVRQATALN 561

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ ALRE+LG+HV QKGS+V  ++LRFDFSH + + PE LR +E  VN +I+  
Sbjct: 562 HSATHLLHAALREILGEHVSQKGSLVDSQRLRFDFSHFEAIKPEQLRALEDRVNAEIRRN 621

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
             V  +E  +  AK   G  A+FGE Y D VRV+ +G                  S ELC
Sbjct: 622 SAVEIEETDIDTAKA-KGAMALFGEKYGDTVRVLTMGG---------------GFSVELC 665

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVT--TGLAY------KAFEAACSLEKEVD 816
           GGTH++ T +   F + SE G+A G+RRI AVT    LAY      +  EAA  ++   +
Sbjct: 666 GGTHVNRTGDIGLFKITSEGGVAAGVRRIEAVTGAPALAYLNDAEEQLKEAASLVKGSRE 725

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAAS-NGKPFCISRVEVGLDA 875
           +     G LLE+N  R+ +K++ +   + A     + A +A   NG     +R + GLD 
Sbjct: 726 NLLDKLGGLLERN--RQLEKELEQLKAKAASAAGNDLAASAVEVNGIRVLAARQD-GLDG 782

Query: 876 AAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLK 935
            A+   V ++  + G  V++    +  +K V+ AGV +  D + +L+  + L        
Sbjct: 783 KALLALVDQLKNKLGSAVILLGGVQ-DDKVVLVAGVTQ--DLTSRLKAGD-LMRQAAAAV 838

Query: 936 GRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           G  G G+  +A G GTDAA++  A+ LA  FA   L
Sbjct: 839 GGKGGGRPDMAQGGGTDAAKLDEALALALPFAQKAL 874


>gi|423305263|ref|ZP_17283262.1| alanyl-tRNA synthetase [Bacteroides uniformis CL03T00C23]
 gi|423311081|ref|ZP_17289050.1| alanyl-tRNA synthetase [Bacteroides uniformis CL03T12C37]
 gi|392680113|gb|EIY73487.1| alanyl-tRNA synthetase [Bacteroides uniformis CL03T12C37]
 gi|392681885|gb|EIY75241.1| alanyl-tRNA synthetase [Bacteroides uniformis CL03T00C23]
          Length = 872

 Score =  607 bits (1566), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 335/747 (44%), Positives = 440/747 (58%), Gaps = 61/747 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++RD+F  FFE K H    S+P+V  +DPTL+F NAGMNQ+K I LG        +K 
Sbjct: 4   ANEIRDSFKSFFESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGN-----HPAKY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWE L  V 
Sbjct: 59  KRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAWEYLVDVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +L    LYAT F G  + GL  DNEA   W +FLP   +L     DNFWEMGDTGPCGPC
Sbjct: 119 KLDPKDLYATVFEGSAEEGLERDNEAASYWEQFLPKDHILNGNKHDNFWEMGDTGPCGPC 178

Query: 240 SEIHYDRTGNRDAA-----SLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + A      LVN D P  IEIWN+VF+QFNR++DGSL+ LPAK +DTG+
Sbjct: 179 SEIHVDSRSEEEKAKVPGSQLVNKDHPQVIEIWNLVFMQFNRKADGSLEGLPAKVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF PI  AI    G      K G D  +K D+A RV+ADHI
Sbjct: 239 GFERLVRTLQGKTSNYDTDVFQPILKAIGDMAGK-----KYGED--EKSDIAMRVIADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++F+I DG  P N    YV+RRILRRAVRYG   L  +  F   L+ ++++ MG  +P
Sbjct: 292 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLIENMGAAYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ--GK-VLSGQDAFILWDTYGF 471
           EL  ++  I ++I  EE SF +TL  GI   +K   D +  GK  +SG+DAF L+DT+GF
Sbjct: 352 ELDAQKELIAKVIKEEEDSFLRTLETGIRLLEKTMADAKSTGKNEISGKDAFTLYDTFGF 411

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E G+  DI+ F+  M + ++R+R+A   + G  I +    T  +   G  
Sbjct: 412 PLDLTELILRENGMTADIKEFDAEMQQQKQRARNAAAIETGDWITLKEGTTEFV---GYD 468

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            T+     + ++  K   + +Y                IVL  + FYAE GGQ+ D G +
Sbjct: 469 YTEYETSILRYRQVKQKNQTLYQ---------------IVLDKTPFYAESGGQVGDTGVL 513

Query: 592 EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHML 651
              F +  V + +      IHI   T+          + C VD D+R   A NH+ TH+L
Sbjct: 514 VNEFETIEVVDTKKENNLPIHI---TKKLPEHMEAPMMAC-VDTDKRAACAANHSATHLL 569

Query: 652 NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS-K 710
           + ALREVLG+HV+QKGS+V P+ LRFDFSH + V  E +R++E IVN +I+A + +   +
Sbjct: 570 DAALREVLGEHVEQKGSLVTPDSLRFDFSHFQKVTDEEIRKVEHIVNAKIRANIPLKEYR 629

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
              + EAK + G  A+FGE Y D VRV+  G                  S E CGGTH++
Sbjct: 630 NIPIEEAKEL-GAIALFGEKYGDHVRVIQFGS-----------------SVEFCGGTHVA 671

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVT 797
            T       ++SE  +A G+RRI A T
Sbjct: 672 ATGNIGMVKIISESSVAAGVRRIEAYT 698


>gi|110597674|ref|ZP_01385959.1| alanyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
 gi|110340794|gb|EAT59271.1| alanyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
          Length = 901

 Score =  607 bits (1566), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 373/896 (41%), Positives = 508/896 (56%), Gaps = 104/896 (11%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R +F  FF  K H   +S+PV+P +DPTLLF NAGMNQ+K +FL   D  T+    
Sbjct: 18  SREIRQSFLDFFAQKGHTIVRSAPVIPADDPTLLFTNAGMNQFKDVFL---DKGTR--PY 72

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            RA +TQKCIRA GKHNDL+DVG+DTYHHTFFEMLGNWSFGDY+K EAI WAWEL+T V+
Sbjct: 73  NRAADTQKCIRASGKHNDLEDVGRDTYHHTFFEMLGNWSFGDYYKKEAITWAWELMTGVW 132

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPAS--RVLPFGCKDNFWEMGDTGPCG 237
           +LPADRLYAT +          D+E+  IW      S   +L FG KDNFWEMG+TGPCG
Sbjct: 133 KLPADRLYATVY--------QDDDESFQIWKDHTSISPEHILRFGDKDNFWEMGETGPCG 184

Query: 238 PCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFE 297
           PCSEIH D T +    SLVN  D   IE+WN+VFIQ+NR+SDG L+PLP KHVDTG+GFE
Sbjct: 185 PCSEIHIDLTDDASGKSLVNVGDYRVIELWNLVFIQYNRQSDGRLEPLPNKHVDTGMGFE 244

Query: 298 RLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTL 357
           R+ +++Q K SNYDTDVF P+FD I + TG R      GA   +  D+A RV+ADH RTL
Sbjct: 245 RVAAVMQGKSSNYDTDVFKPLFDRITEITGVR-----YGASMDEPHDIAMRVIADHARTL 299

Query: 358 SFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELK 417
           +FA++DG+ P NEGR YVLRRILRRA+RY S+ L   +   + LV  +   MGDVFPELK
Sbjct: 300 TFALSDGAMPSNEGRGYVLRRILRRALRY-SKNLGYNEPILHQLVGTLADSMGDVFPELK 358

Query: 418 QREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV---QGKVLSGQDAFILWDTYGFPLD 474
           ++   + +II +EE SF  TL +GIE F      V   +G V+ G DAF L+DTYGFP D
Sbjct: 359 KQRDTVSKIIRSEEESFIVTLDRGIEIFNDVVSKVRSAKGTVIKGVDAFKLYDTYGFPFD 418

Query: 475 LTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATD 534
           LT+LMA + GL VD EGF + M E + R+R+ + ++               H+      +
Sbjct: 419 LTRLMASDEGLQVDGEGFEHCMQEQKTRARADRKEK---------------HQ----IEE 459

Query: 535 DSFKFIWFQDHKSVIKAIYTGSEFIESVV----PGNEVGIVLASSSFYAEQGGQIFDEGF 590
           D  +++WF D  +     Y   E    ++       ++ I+L  + FYAE GGQ+ D G+
Sbjct: 460 DGSQWLWFSDQHATSFVGYEQLELPVRIIACKHAKEKLLILLDKTPFYAESGGQVGDRGW 519

Query: 591 IEGLFGSFYVRNVQIYGGFVIHI---------------GSLTEGAGRFSVGEEVICKVDY 635
           IE       V +    G  ++H+                 LT   G+ S        VD+
Sbjct: 520 IETASYRLQVTDTVKDGDAIVHVVTAAFDKILDTAVNPADLTIDEGQLSAE----ASVDH 575

Query: 636 DRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIES 695
             R+    NHT TH+L+ ALR +LG HV QKGS V PE+LRFDFSH   +    + R+E+
Sbjct: 576 HIRQDTERNHTATHLLHGALRRILGQHVQQKGSYVNPERLRFDFSHFSKMSDAEIARVEA 635

Query: 696 IVNEQIKAELDVFSKEATLAEAKCI-NGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENK 754
            VNE+I+   +V  K A +     I  G  A FG+ Y D VRVV +              
Sbjct: 636 SVNEEIRRAEEV-QKHADIPYDDAIAKGALAFFGDKYADLVRVVEVP------------- 681

Query: 755 EWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKE 814
               IS ELCGGTH+ N      F ++SE  +A G+RRI A+T   A K      +  ++
Sbjct: 682 ---GISVELCGGTHVDNIGRIGLFKIVSESSVASGVRRIEALTGKSAEKLLWQEYAELQQ 738

Query: 815 VDDASKIEGS------LLEKNQVRKA-QKKVAEENLQKAVKVATETAEAAASNGKPFCIS 867
           +    K +G       ++E    RK  +K++ E  +   ++  +   ++A        ++
Sbjct: 739 IRQLLKAKGDEPVASRIVELMDARKELEKELHEIRIGSLLQSLSVDLQSAPEVSGCKLLA 798

Query: 868 RVEVGLDAAAVREAVLKVIE------------QKG-MPVMVFSTDETTNKAVVCAG 910
           +V  G D  A+R A L + E            Q G + + VF++D+   +  + AG
Sbjct: 799 KVVEGADGDALRSAGLALREAVPCAAGLLCSVQDGKVSLAVFASDKAVKELGIDAG 854


>gi|37680987|ref|NP_935596.1| alanyl-tRNA synthetase [Vibrio vulnificus YJ016]
 gi|41018162|sp|Q7MHR6.1|SYA_VIBVY RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|37199737|dbj|BAC95567.1| alanyl-tRNA synthetase [Vibrio vulnificus YJ016]
          Length = 860

 Score =  607 bits (1566), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 366/914 (40%), Positives = 519/914 (56%), Gaps = 86/914 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR+ F KFFE K H    SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRNAFLKFFESKGHQIVDSSSLVPHNDPTLLFTNAGMNQFKDCFLGA-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT+  +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIAFAWEFLTETLKL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           P DRL  T +          D+EA DIW +   +PA R++  G K        DNFW MG
Sbjct: 122 PKDRLLVTVY--------ETDDEAFDIWNQKVGVPADRIIRIGDKKGGKQYESDNFWTMG 173

Query: 232 DTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
           DTGPCGPC+EI YD      G R        D    IEIWN VF+QFNR +DG+++PLP 
Sbjct: 174 DTGPCGPCTEIFYDHGEHIWGGRPGTP--EEDGDRFIEIWNNVFMQFNRHADGTMEPLPK 231

Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
             VDTG+G ER+++I+Q   SNY+ DVF  +  A  +  G    S           + + 
Sbjct: 232 PSVDTGMGIERISAIMQGVHSNYEIDVFQKLIKATAEIVGCEDLS-----------NQSL 280

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RV+ADHIR+ SF IADG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF+ LV ++ +
Sbjct: 281 RVIADHIRSCSFLIADGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGVFFHKLVGVLAE 339

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWD 467
           VMG    ELK+++A + +++  EE +FG+TL +G+    +A   ++GK L G+  F L+D
Sbjct: 340 VMGSAADELKKQQAVVEKVLRIEEENFGRTLERGMVILNEALDALEGKELDGETVFKLYD 399

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
           TYGFP DLT  +A ER   +D  GF  AM+E R+R+R A      G    D +A     K
Sbjct: 400 TYGFPADLTNDVARERDFTIDEAGFEKAMEEQRQRAREA------GQFGTDYNA-----K 448

Query: 528 RGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFD 587
             V A  +   +   Q+   V+ A++   E   ++  G++  ++L  + FYAE GGQ  D
Sbjct: 449 IKVDAQSEFCGYTSTQERSDVV-ALFVEGEETATLSAGDKAIVILQETPFYAESGGQCGD 507

Query: 588 EGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTC 647
            G ++   G F V + Q  G  + H G L EG    + G++V   VD +RR  I+ NH+ 
Sbjct: 508 SGVLKTESGLFQVEDTQKLGNAIAHHGVLVEGV--LAKGDQVTAIVDAERRAAISLNHSA 565

Query: 648 THMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDV 707
           TH+L+ ALR+VLG+HV QKGS+V  E LRFDFSH + V    L+ +E +VN QI+    +
Sbjct: 566 THLLHAALRQVLGEHVAQKGSLVKAENLRFDFSHLEAVTAAELKEVERLVNAQIRRNHTI 625

Query: 708 FSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGT 767
            +    +  AK   G  A+FGE Y D VRV+++G                  S ELCGG 
Sbjct: 626 ETNIMDIESAKQ-KGAMALFGEKYDDEVRVLSMG----------------DFSTELCGGI 668

Query: 768 HLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEA-ACSLEKEVDDASKIEGSLL 826
           H SNT +   F + SE GIA GIRRI AVT   A +A +A A   E+++ DA+    SL 
Sbjct: 669 HASNTGDIGLFKITSEGGIAAGIRRIEAVTGEAALEAIDAQARKFEEKLQDAANKAKSL- 727

Query: 827 EKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVI 886
            + ++++ + K+A +     +    E A      G    +++++ G D  A+R  V ++ 
Sbjct: 728 -EKEIQQLKDKLASQASANLIDQVKEIA------GVKVLVAKLD-GADNKALRGMVDELK 779

Query: 887 EQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLA 946
            Q G  +++   +   +K  + AGV +  D + +++  E +    Q + G+ G G+  +A
Sbjct: 780 NQMGSGIIMLG-NVADDKVGLIAGVTQ--DLTSKVKAGELVNMVAQQVGGK-GGGRPDMA 835

Query: 947 SGQGTDAAQVTPAM 960
              GTD++ +  A+
Sbjct: 836 QAGGTDSSALPSAL 849


>gi|163802982|ref|ZP_02196869.1| alanyl-tRNA synthetase [Vibrio sp. AND4]
 gi|159173272|gb|EDP58100.1| alanyl-tRNA synthetase [Vibrio sp. AND4]
          Length = 865

 Score =  607 bits (1565), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 373/920 (40%), Positives = 516/920 (56%), Gaps = 93/920 (10%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR+ F KFFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRNAFLKFFESKGHQIVESSSLVPHNDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LTK  +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIAFAWEFLTKTLKL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           PADRL  T +          D+EA DIW K   +PA R++  G K        DNFW+MG
Sbjct: 122 PADRLLVTIY--------ETDDEAFDIWNKKVGVPADRIIRIGDKKGGKPFESDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
           DTGPCGPC+EI YD      G R        D    IEIWN VF+QFNR++DG+++PLP 
Sbjct: 174 DTGPCGPCTEIFYDHGEHIWGGRPGTP--EEDGDRFIEIWNNVFMQFNRQADGTMEPLPK 231

Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
             VDTG+G ER+++I+Q   SNY+ DVF  +  A  +  G    S           + + 
Sbjct: 232 PSVDTGMGIERISAIMQGVHSNYEIDVFQALIKAAAEVIGYEDLS-----------NQSL 280

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RV+ADHIR+ SF I DG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF+ LV ++ +
Sbjct: 281 RVIADHIRSCSFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGAFFHKLVGVLAE 339

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKA-----AQDVQGKVLSGQDA 462
           +MG    ELK+++A + +++  EE +FG+TL +G+    +A     +Q   GKVL G+  
Sbjct: 340 IMGTAGEELKRQQAVVEKVLRIEEENFGRTLERGMAILNEALDNISSQGTDGKVLDGETV 399

Query: 463 FILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADAT 522
           F L+DTYGFP DLT  +A ER  ++D EGF  AM+E R+R+R A N           D  
Sbjct: 400 FKLYDTYGFPADLTNDVAREREFVIDEEGFEKAMEEQRQRAREAGN--------FGTDYN 451

Query: 523 AALHKRGVLATDDSFKFIWFQDHK--SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAE 580
           AA+        D   +F  +   K  S + A++     + S+  G++  IVL  + FYAE
Sbjct: 452 AAIK------VDAQTEFCGYTGTKGSSSVAAMFVEGNEVASLSAGDKAIIVLGETPFYAE 505

Query: 581 QGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
            GGQ  D G I    G F V + Q  G  + H G + EG    +  +EV   VD +RR  
Sbjct: 506 SGGQCGDAGEIRTESGVFRVEDTQKLGNAIAHHGIMAEGV--LAKDDEVATIVDAERRAA 563

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           I+ NH+ TH+L+ ALR++LG+HV QKGS+V  + LRFDFSH + V    L+ +E +VN Q
Sbjct: 564 ISLNHSATHLLHAALRQLLGEHVTQKGSLVKADGLRFDFSHLEAVTAAELKEVERLVNAQ 623

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           ++    + +    +  AK   G  A+FGE Y D VRV+++G                  S
Sbjct: 624 VRRNHTIETNVMDIESAKK-KGAMALFGEKYDDEVRVLSMG----------------DFS 666

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK 820
            ELCGG H S+T +   F + SE GIA GIRRI AVT   A  A EA  +  +E    S 
Sbjct: 667 TELCGGIHASSTGDIGLFKITSEGGIAAGIRRIEAVTGEGALDAIEAQTTKYEEKLAESA 726

Query: 821 IEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVRE 880
            +   LEK +++K Q K+A      A + A    +    NG    I+ +E G D+  +R 
Sbjct: 727 QKAKSLEK-EIQKLQDKMA------AAESANIMGKVQDINGTKALIAALE-GADSKNLRT 778

Query: 881 AVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGK 940
            V  +  Q G  V++ + +   +K  + AGV +  D   +++  + +    + + G+ G 
Sbjct: 779 MVDDIKNQVGSGVILLA-NVNGDKIGLIAGVTK--DLIGKVKAGDLVKMVAEQVGGKGG- 834

Query: 941 GKGGLASGQGTDAAQVTPAM 960
           G+  +A   GTD A +  AM
Sbjct: 835 GRPDMAQAGGTDVAALPEAM 854


>gi|386020028|ref|YP_005938052.1| alanyl-tRNA synthetase [Pseudomonas stutzeri DSM 4166]
 gi|327480000|gb|AEA83310.1| alanyl-tRNA synthetase [Pseudomonas stutzeri DSM 4166]
          Length = 874

 Score =  607 bits (1565), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 377/936 (40%), Positives = 530/936 (56%), Gaps = 88/936 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F +FFE+K H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLRFFEEKGHTRVASSSLIPANDPTLLFTNAGMNQFKDCFLGL-----EKRAY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           TRA  +QKC+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT  K
Sbjct: 58  TRATTSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWEFLTSDK 117

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFW 228
              LP ++L+ T +        A D+EA DIW K   +PA R++  G         DNFW
Sbjct: 118 WLNLPKEKLWVTVY--------ATDDEAYDIWTKEVGVPAERMVRIGDNKGAPYASDNFW 169

Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
            MGDTGPCGPC+EI +D   +           D    IEIWN VF+QFNR +DG L PLP
Sbjct: 170 AMGDTGPCGPCTEIFFDHGEHIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLP 229

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
           A  VDTG+G ER++++LQ+  SNY+ D+F  + +A   A G            A++   +
Sbjct: 230 APSVDTGMGLERISAVLQHVNSNYEIDLFQSLLNAAADAIGC-----------ANEGQAS 278

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            +VVADHIR+  F IADG  P NEGR YVLRRI+RRA R+G++ L A+  FF+ +V  +V
Sbjct: 279 LKVVADHIRSCGFLIADGVTPSNEGRGYVLRRIIRRACRHGNK-LGAKGSFFHRIVAALV 337

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
             MGD FPELKQ++AHI  ++  EE  F KTL +G++  ++    + G V+ G+  F L+
Sbjct: 338 AEMGDAFPELKQQQAHIERVLKNEEEQFAKTLEQGLKILEQDLAGLAGSVIPGEVVFKLY 397

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFP+DLT  +A ER L +D EGF   M   RER+RSA       A  MD ++     
Sbjct: 398 DTYGFPVDLTGDIARERNLTLDEEGFEREMQAQRERARSAS------AFGMDYNS----- 446

Query: 527 KRGVLATDDSFKFIWFQDHKSVIK--AIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
              ++  +   +FI +Q      K  A++     ++S+  G E  +VL  + FYAE GGQ
Sbjct: 447 ---LVKVEGETRFIGYQGTSGSGKVLALFKQGMLVDSLSAGEEGVVVLDQTPFYAESGGQ 503

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           I D G++E     F VR+    GG  +H G +   +G  + G +V   VD   R+  A N
Sbjct: 504 IGDCGYLEAQGLRFDVRDTSKAGGAFLHHGIVD--SGTLTTGAQVEATVDASVRQATALN 561

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ ALRE+LG+HV QKGS+V  ++LRFDFSH + + PE LR +E  VN +I+  
Sbjct: 562 HSATHLLHAALREILGEHVSQKGSLVDSQRLRFDFSHFEAIKPEQLRALEDRVNAEIRRN 621

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
             V  +E  +  AK   G  A+FGE Y D VRV+ +G                  S ELC
Sbjct: 622 SAVEIEETDIDTAKA-KGAMALFGEKYGDTVRVLTMGG---------------GFSVELC 665

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVT--TGLAY------KAFEAACSLEKEVD 816
           GGTH++ T +   F + SE G+A G+RRI AVT    LAY      +  +AA  ++   +
Sbjct: 666 GGTHVNRTGDIGLFKITSEGGVAAGVRRIEAVTGAPALAYLNDAEEQLKQAASLVKGSRE 725

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAAS-NGKPFCISRVEVGLDA 875
           +     G LLE+N  R+ +K++ +   + A     + A +A   NG     +R + GLD 
Sbjct: 726 NLLDKLGGLLERN--RQLEKELEQLKAKAASAAGNDLAASAVEVNGIRVLAARQD-GLDG 782

Query: 876 AAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLK 935
            A+   V ++  + G  V++    +  +K V+ AGV +  D + +L+  + L        
Sbjct: 783 KALLALVDQLKNKLGSAVILLGGVQ-DDKVVLVAGVTQ--DLTSRLKAGD-LMRQAAAAV 838

Query: 936 GRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           G  G G+  +A G GTDAA++  A+ LA  FA   L
Sbjct: 839 GGKGGGRPDMAQGGGTDAAKLDEALALALPFAQQAL 874


>gi|308187884|ref|YP_003932015.1| alanyl-tRNA synthetase [Pantoea vagans C9-1]
 gi|308058394|gb|ADO10566.1| Alanyl-tRNA synthetase [Pantoea vagans C9-1]
          Length = 875

 Score =  607 bits (1565), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 360/919 (39%), Positives = 518/919 (56%), Gaps = 81/919 (8%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    +      TR
Sbjct: 7   EIRQAFLDFFHSKGHEVVTSSSLVPNNDPTLLFTNAGMNQFKDVFLGQDKRD-----YTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK EAI +AWELLT  + +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIGFAWELLTSEQWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW   +  P  R++  G         DNFW+M
Sbjct: 122 SLPKERLWVTVY--------ETDDEAYNIWADEIGVPRERIIRIGDNKGSAYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPCSEI YD   +           D    IEIWNIVF+QFNR++DG++ PLP  
Sbjct: 174 GDTGPCGPCSEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMLPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER++++LQ+  SNY+ D+F  +  A+ Q TGA   S K           + R
Sbjct: 234 SVDTGMGLERISAVLQHVNSNYEIDLFQKLIQAVAQVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  +V+V
Sbjct: 283 VIADHIRSCAFLIADGVIPSNENRGYVLRRIIRRAVRHGN-MLGAKEAFFYKLVAPLVEV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    EL++++A + +++ +EE  F +TL +G+    +  + +QG  L G+  F L+DT
Sbjct: 342 MGAAGEELQRQQAQVEQVLKSEEDQFARTLERGLALLDEELEKLQGDTLDGEIVFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           +GFP DLT  +  ER L +D  GF  AM++ R+R+R A    A  + V+  DA +     
Sbjct: 402 FGFPADLTADVCRERNLKIDEAGFEQAMEQQRQRAREASGFGADYSNVIRIDAAS----- 456

Query: 529 GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDE 588
                  SFK     D  + +KA+Y   E ++ V  G +  +VL  + FY E GGQ+ D 
Sbjct: 457 -------SFKGYDQLDLAATVKALYVAGEAVDEVTAGQDAVVVLDETPFYGESGGQVGDT 509

Query: 589 GFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
           G ++G    F V++ Q YG  + H+G LT  AG+  +G+ +  +VD  RR  I  NH+ T
Sbjct: 510 GLLKGKNAEFSVQDTQKYGQAIGHVGKLT--AGQLRIGDRLEAQVDAARRARIRLNHSAT 567

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+L+ ALR+VLG+HV QKGS+V  + LRFDFSH + + P  +R++E IVN QI+  L V 
Sbjct: 568 HLLHAALRQVLGEHVAQKGSLVNDKYLRFDFSHFEAMKPHEIRQVEDIVNAQIRRNLPVE 627

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
           ++   L  AK   G  A+FGE Y   VRV+ +G                  S ELCGGTH
Sbjct: 628 TEVMDLEAAKS-KGAMALFGEKYDQRVRVLTMG----------------DFSVELCGGTH 670

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEK 828
            + T +   F + +E G A GIRRI A+T   A     A  S  +++    K   S L +
Sbjct: 671 AARTGDIGLFRIQAESGTAAGIRRIEAITGEGALAQVNAQSSQLQDLAQLVKANSSNLNE 730

Query: 829 ------NQVRKAQKKVAE-ENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREA 881
                 + VR  +K++ +  + Q A + A+ ++ A    G    +S +   ++   +R  
Sbjct: 731 KVRGLVDYVRALEKELQQLRDQQAAQESASLSSNAIDVKGVKLLVSELN-NVEPKMLRTM 789

Query: 882 VLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKG 941
           V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G+ G G
Sbjct: 790 VDDLKNQLGSAIIVLAT-VAEGKVSLIAGVTK--DLTDRVKAGELIAGLAQQVGGKGG-G 845

Query: 942 KGGLASGQGTDAAQVTPAM 960
           +  +A   GTDA  +  A+
Sbjct: 846 RPDMAQAGGTDADALKGAL 864


>gi|89075063|ref|ZP_01161504.1| alanyl-tRNA synthetase [Photobacterium sp. SKA34]
 gi|89049150|gb|EAR54715.1| alanyl-tRNA synthetase [Photobacterium sp. SKA34]
          Length = 874

 Score =  607 bits (1564), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 372/933 (39%), Positives = 520/933 (55%), Gaps = 88/933 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  +  FFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EIRRAYLAFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDTFLGL-----EKRSYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI +AWE LT V +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKHDAIGYAWEFLTSVLKL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           PADRL  T +          D+EA DIW K   +PA R++  G K        DNFW+MG
Sbjct: 122 PADRLVVTVY--------ETDDEAFDIWNKEIGIPADRIVRIGDKKGGKPFESDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
           DTGPCGPC+EI YD      G R        D    IEIWN VF+QFNR+ DG+++PLP 
Sbjct: 174 DTGPCGPCTEIFYDHGDHIWGGRPGTP--EEDGDRFIEIWNNVFMQFNRQVDGTMEPLPK 231

Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
             VDTG+G ER+ +I+Q   SNY+ D+F  +     +  G    S           + + 
Sbjct: 232 PSVDTGMGIERIAAIMQGVHSNYEIDIFQTLIKEAAKVIGFEDLS-----------NQSL 280

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RVVADHIR+ ++ I+DG  P NEGR YVLRRI+RRAVR+G++ L A+  FF  LV  + +
Sbjct: 281 RVVADHIRSCAYLISDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAEGAFFYKLVGPLAE 339

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWD 467
           +MG    ELK ++  + +++  EE +FG+TL +G+    +A   + GKVL G+  F L+D
Sbjct: 340 IMGTAGEELKAQQELVEKVLKIEEDNFGRTLDRGLTILNEALDKLDGKVLDGETVFKLYD 399

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQN--KQAGGAIVMDADATAAL 525
           TYGFP DLT  +A ERG  +D +GF  AM+E R+R+R A N       AI +DA+     
Sbjct: 400 TYGFPADLTNDVARERGFTIDEDGFEAAMEEQRQRARDAGNFGVDYNNAIKVDAETVFC- 458

Query: 526 HKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
              G  ATD           +S I A+Y     ++SV  G E  +VL ++ FYAE GGQ 
Sbjct: 459 ---GYSATDG----------ESEIVALYRDGVAVDSVNAGEEALVVLTNTPFYAESGGQC 505

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D G +      F V + Q +G  + H G + EG+   +VG+++   VD  RR  I+ NH
Sbjct: 506 GDSGILTAEAVLFNVDDTQKFGAAIGHKGQVAEGS--LTVGQKLTASVDSARRAAISLNH 563

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR +LG+HV QKGS+V  + LRFDFS+ + V PE LR +E++VN+QI+A  
Sbjct: 564 SATHLMHAALRTILGEHVSQKGSLVKADGLRFDFSNLEAVKPEQLRAVETMVNDQIRAN- 622

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            V        EA    G  A+FGE Y D VRV+++G                  S ELCG
Sbjct: 623 HVIETNIMDIEAAKAKGAMALFGEKYDDEVRVLSMGE----------------FSTELCG 666

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAA-CSLEKEVDDASKIEGS 824
           G H + T +   F +LSE GIA GIRRI AVT   + +        L K          S
Sbjct: 667 GIHATRTGDIGLFKILSESGIAAGIRRIEAVTGAASIEEMHNEDVMLAKTARLVKSDSAS 726

Query: 825 LLEKNQVRKAQKKVAEENLQK------AVKVATETAEAAASNGKPFCISRVEVGLDAAAV 878
           ++ K +   +  K  E+ +Q+      A + A    +A   NG    I+++  G D  A+
Sbjct: 727 VVSKVEALVSHSKQLEKEIQQLKDKLAAQEGANLINQAQEINGVKVLIAKLN-GADNKAL 785

Query: 879 REAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRC 938
           R  V ++  Q G  V++   + + +K  + AGV +  D   +++  E +    Q + G+ 
Sbjct: 786 RGMVDELKNQLGSGVVLLG-NVSDDKVGLIAGVTK--DLVGKVKAGELVNLVAQQVGGKG 842

Query: 939 GKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           G G+  +A   GTDAA +  A++  A + A KL
Sbjct: 843 G-GRPDMAQAGGTDAAALPAALETVAPWLADKL 874


>gi|330998231|ref|ZP_08322057.1| alanine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
 gi|329568923|gb|EGG50721.1| alanine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
          Length = 871

 Score =  607 bits (1564), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 364/930 (39%), Positives = 515/930 (55%), Gaps = 81/930 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++RD+F KFFE K H+   S+P+V  +DPTL+F NAGMNQ+K I LG     ++    
Sbjct: 3   ANEIRDSFVKFFESKGHLIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNRPATSK---- 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAIEWAWE L  V 
Sbjct: 59  -RCTDSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAIEWAWEYLVDVL 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           ++    LYAT F G  + GL  DNEA   W KFLPA  ++     DNFWEMG TGPCGPC
Sbjct: 118 KIDKSNLYATVFEGSPEEGLERDNEAASYWEKFLPADHIINGNKHDNFWEMGATGPCGPC 177

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + A      LVN D+P  IEIWN+VF+Q+NR++D SL+PLPAK +DTG+
Sbjct: 178 SEIHIDLRPEEEKAKVPGRELVNKDNPLVIEIWNLVFMQYNRKADQSLEPLPAKVIDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL +++Q K SNYDTDVF PI   I   +  R      G D   K D+A RVVADH+
Sbjct: 238 GFERLCAVMQGKRSNYDTDVFQPIIRVIGDLSDCR-----YGED--PKKDVAMRVVADHL 290

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++F+IADG  PGN    YV+RRILRRAVRY    L  ++ F   L+ ++V+ MG  +P
Sbjct: 291 RTIAFSIADGQLPGNAKAGYVIRRILRRAVRYAYTFLGQKEAFMYKLLPVLVQEMGKSYP 350

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK---VLSGQDAFILWDTYGF 471
           EL+ ++  I +++  EE SF +TL  GI    +   + +     V+ G +AF L+DTYGF
Sbjct: 351 ELEAQKVLISKVMKEEEDSFLRTLETGIRLLDRVMAETRASGKTVIDGVEAFTLFDTYGF 410

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E G+ VD E F+  M + +ER+R+A   + G  +V+    T         
Sbjct: 411 PLDLTELICRENGMTVDEETFHAEMQKQKERARNAAAVETGDWVVVREGET--------- 461

Query: 532 ATDDSFKFIWFQDHKSVI----KAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFD 587
                FK   + +H+  I    K       F +         IVL  + FYAE GGQ+ D
Sbjct: 462 ----EFKGWDYTEHECHILRYRKVTQKKQTFYQ---------IVLDYTPFYAEMGGQVGD 508

Query: 588 EGFIEGLFGSFYVRNVQIYGGFVIHIG-SLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
            G +     +  + + +      +HI  +L E         + +  VD D R     NHT
Sbjct: 509 RGVLCSEHETIEIVDTKRENNLPVHIAKTLPEHP-----EADFMACVDTDLRAASEANHT 563

Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD 706
           CTH+L+ ALR VLG+HV+QKGS+V PE LRFDFSH + V  E LR +E IVN +I+ +L 
Sbjct: 564 CTHLLDQALRTVLGEHVEQKGSLVTPEYLRFDFSHFQKVTDEQLREVERIVNAKIREDLP 623

Query: 707 VFS-KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
           +   ++  + +AK +  + A+FGE Y D VRVV  G                  S E CG
Sbjct: 624 LQDHRDMPIEKAKELGAI-ALFGEKYGDRVRVVQFGD-----------------SVEFCG 665

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVT----TGLAYKAFEAACSLEKEVDDASKI 821
           G H  +T       +LSE  +A GIRRI A+T      + Y   +    L    ++A  +
Sbjct: 666 GCHAKSTGRIGMVKILSESSVAAGIRRIEAITGEKVENMLYTLQDLTNELRTLFNNAPDV 725

Query: 822 EGSLLEKNQVRKAQKKVAEENLQK--AVKVATETAEAAASNGKPFCISRVEVGLDAAAVR 879
           + ++L+  +     KK  EE++++  A   A   ++AA  NG    + R  + + A  V+
Sbjct: 726 KAAILKSIEENAILKKQIEESMKEKAAQAKARIVSQAAIVNG--VTLYRSILPMPADLVK 783

Query: 880 EAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCG 939
           +   + +       +V        K ++ A   +   ++  + V + +  A + ++G  G
Sbjct: 784 DMAFQ-LRNGAEDALVIIGSLHEGKPMLTAAASDNMVKAHGMNVGKIVREAAKLIQG-GG 841

Query: 940 KGKGGLASGQGTDAAQVTPAMDLAAEFAAM 969
            G+   A+  G +A  ++ A+D   E AA+
Sbjct: 842 GGQPHFATAGGKNADGLSAAVDKFVELAAL 871


>gi|260361824|ref|ZP_05774840.1| alanine--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|308114481|gb|EFO52021.1| alanine--tRNA ligase [Vibrio parahaemolyticus K5030]
          Length = 788

 Score =  607 bits (1564), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 367/863 (42%), Positives = 486/863 (56%), Gaps = 98/863 (11%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR+ F KFFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRNAFLKFFESKGHQIVESSSLVPHNDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT V +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAISFAWEFLTDVLKL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           PADRL  T +          D+EA DIW K   +PA R++  G K        DNFW+MG
Sbjct: 122 PADRLLVTVY--------ETDDEAFDIWNKKVGVPADRIIRIGDKKGGKPYESDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
           DTGPCGPC+EI YD      G R        D    IEIWN VF+QFNR +DG+++PLP 
Sbjct: 174 DTGPCGPCTEIFYDHGEHIWGGRPGTP--EEDGDRFIEIWNNVFMQFNRHADGTMEPLPK 231

Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
             VDTG+G ER+++I+Q   SNY+ DVF  +  A  +  G    S           + + 
Sbjct: 232 PSVDTGMGIERISAIMQGVHSNYEIDVFQALIKAAAEVIGYEDLS-----------NQSL 280

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RV+ADHIR+ SF I DG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF+ LV ++  
Sbjct: 281 RVIADHIRSCSFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGAFFHKLVGVLAD 339

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWD 467
           +MG    ELK+++A + +++  EE +FG+TL +G+    +A  ++ GKVL G+  F L+D
Sbjct: 340 IMGTAGEELKRQQAVVEKVLRIEEENFGRTLERGMAILNEALDNLDGKVLDGETVFKLYD 399

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
           TYGFP DLT  +A ER   +D EGF  AM+E R+R+R A      G    D +A      
Sbjct: 400 TYGFPADLTNDVAREREFAIDEEGFEKAMEEQRQRAREA------GQFGTDYNA------ 447

Query: 528 RGVLATDDSFKFIWFQDHK--SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
              +  D   +F  +   K  S + A++     ++S+  G++  IVL  + FYAE GGQ 
Sbjct: 448 --AIKVDTQTEFCGYVGTKGSSSVAAMFVEGNEVDSLSAGDKAIIVLGETPFYAESGGQC 505

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D G I    G F V + Q  G  + H G + EG    + G+EV   VD +RR  I+ NH
Sbjct: 506 GDAGEIRTEAGVFRVEDTQKLGNAIAHHGVMAEGV--LAKGDEVATIVDAERRAAISLNH 563

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+L+ ALR+VLG+HV QKGS+V  E LRFDFSH + V    L+ +E +VN QI+   
Sbjct: 564 SATHLLHAALRQVLGEHVTQKGSLVKAENLRFDFSHLEAVTAAELKEVERLVNAQIRRNH 623

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    +  AK   G  A+FGE Y D VRV+++G                  S ELCG
Sbjct: 624 VIETNVMDIESAKK-KGAMALFGEKYDDEVRVLSMG----------------DFSTELCG 666

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSL 825
           G H SNT +   F + SE GIA GIRRI AVT   A  A EA          A+K E  L
Sbjct: 667 GIHASNTGDIGLFKITSESGIAAGIRRIEAVTGEAALDAIEA---------QAAKYEEKL 717

Query: 826 LEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKV 885
            E  Q    + K  E+ LQK +K     AE+A   GK        V ++   V  A L+ 
Sbjct: 718 AESAQ----KAKTLEKELQK-LKDKMAAAESANIMGKA-------VEVNGTKVLVAALEG 765

Query: 886 IEQKGMPVMVFSTDETTNKAVVC 908
            + K +  MV +T  T    V+C
Sbjct: 766 ADSKNLRTMV-TTSRTKWAQVLC 787


>gi|189501991|ref|YP_001957708.1| alanyl-tRNA synthetase [Candidatus Amoebophilus asiaticus 5a2]
 gi|189497432|gb|ACE05979.1| hypothetical protein Aasi_0578 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 879

 Score =  607 bits (1564), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 350/804 (43%), Positives = 472/804 (58%), Gaps = 76/804 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           ++ +R  F  FF+ K+H + K++P+V   DPTLLF NAGMNQ+K  FL     N Q +  
Sbjct: 4   SSNIRQKFVDFFKQKDHHHVKAAPIVNKEDPTLLFTNAGMNQFKDFFL-----NQQEAPY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            RA +TQ C+R  GKHNDL++VG DTYHHT FEMLGNWSFG+YFK EAI  AWELLT+VY
Sbjct: 59  QRAISTQPCLRVSGKHNDLEEVGVDTYHHTMFEMLGNWSFGEYFKEEAIACAWELLTEVY 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +LP +RLY T F GDE+  L  D E+ + W K++   R+L    KDNFWEMGDTGPCGPC
Sbjct: 119 KLPQERLYVTVFQGDEEESLELDQESLNTWEKYISRDRILYGNKKDNFWEMGDTGPCGPC 178

Query: 240 SEIHYD-RT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D RT      +    LVN   P  IEIWN+VFIQ+NR + G L  LPAKHVDTG+
Sbjct: 179 SEIHVDIRTEEEIQQQAGKELVNTGHPQVIEIWNLVFIQYNRLASGQLMELPAKHVDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERLT +LQ K S YDTD+F+P+   I +       S K    D +KVD+A RVVADHI
Sbjct: 239 GFERLTMVLQGKSSTYDTDIFVPLIHNIMRL------SHKTYGKD-NKVDIAMRVVADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R ++FAIADG  P N    YV+RRILRRAVRYG   L  +  F   LV+I+ +   +V+P
Sbjct: 292 RAITFAIADGQLPSNTQAGYVVRRILRRAVRYGYTNLGFETPFMYQLVSILAQQFKNVYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQ--DVQG-KVLSGQDAFILWDTYGF 471
           ++KQ++++I ++I +EE SF KTL  G+ + +  ++  ++ G +V+ G  AF L+DTYGF
Sbjct: 352 QIKQQQSYIEQVIKSEEESFFKTLAVGLHRLEHISETLNINGQQVIDGPTAFELYDTYGF 411

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAG--GAIVMDADATAALHKRG 529
           P DLT+L+A+E+GL VD EGF  A+   R RS+ A   + G    +V D D+        
Sbjct: 412 PPDLTRLIAQEKGLEVDEEGFQKALQNQRIRSQQAAVLEQGDWHIVVKDVDSV------- 464

Query: 530 VLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEV-GIVLASSSFYAEQGGQIFDE 588
                    FI +   + + K I   S + +    G E+  IVL  + FY E GGQ+ D 
Sbjct: 465 ---------FIGYDQLELIAKVIQYRSIYQK----GEEIYQIVLDQTPFYPEGGGQVGDT 511

Query: 589 GFI---EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
           G +   E +   F  +    Y   + +   L        +   V   VD  +R LIA NH
Sbjct: 512 GTLIVGEQIIAVFDTKKE--YERIIHYTHELPH-----DLHATVQAVVDVKKRNLIASNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+L+ ALR+VLG H++QKGS+V  + LRFDF H   V PE +R IE IVN++I+A +
Sbjct: 565 SATHLLHAALRQVLGSHIEQKGSLVNEKLLRFDFPHYTKVSPEQIREIEHIVNQKIRANI 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
           ++    + L E     G+ A+FGE Y + VRV+           DP        S ELCG
Sbjct: 625 NLHEVRSMLLEDAKSMGVTALFGEKYGEYVRVITF---------DP------YFSKELCG 669

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSL 825
           GTH S T +   F + +E GIA G RRI A+T   A        S+  +  +A K     
Sbjct: 670 GTHASATGKLGFFKITAETGIAAGTRRIEAITADAAENFIIEQLSILNQATEALK----- 724

Query: 826 LEKNQVRKAQKKVAEE--NLQKAV 847
            + N + K+   + EE  NL+K +
Sbjct: 725 -KPNDLVKSIYHLLEEKANLEKKI 747


>gi|399521298|ref|ZP_10762038.1| alaS [Pseudomonas pseudoalcaligenes CECT 5344]
 gi|399110536|emb|CCH38597.1| alaS [Pseudomonas pseudoalcaligenes CECT 5344]
          Length = 874

 Score =  607 bits (1564), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 376/933 (40%), Positives = 527/933 (56%), Gaps = 96/933 (10%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F  FFE+K H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLSFFEEKGHTRVASSSLIPANDPTLLFTNAGMNQFKDCFLGL-----EKRAY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           TRA  +QKC+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT  K
Sbjct: 58  TRATTSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWEFLTSEK 117

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFW 228
              LP ++L+ T +        A D+EA +IW K +  P  R++  G         DNFW
Sbjct: 118 WLNLPKEKLWVTVY--------ATDDEAYEIWNKEIGVPTERMIRIGDNKGAPYASDNFW 169

Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
            MGDTGPCGPC+EI +D   +           D    IEIWN VF+QFNR +DG L PLP
Sbjct: 170 AMGDTGPCGPCTEIFFDHGEHIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLP 229

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
           A  VDTG+G ER++++LQ+  SNY+ D+F  +  A  +A G            A++   +
Sbjct: 230 APSVDTGMGLERISAVLQHVNSNYEIDLFQNLLAASAKAIGC-----------ANEGQAS 278

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            +VVADHIR+ SF IADG  P NEGR YVLRRI+RRA R+G++ L A+  FF  +V  +V
Sbjct: 279 LKVVADHIRSCSFLIADGVTPSNEGRGYVLRRIVRRACRHGNK-LGAKGSFFYQIVAALV 337

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
             MG+ FPELKQ++AHI  ++  EE  F KTL +G++  ++    +QG V+ G   F L+
Sbjct: 338 AEMGEAFPELKQQQAHIERVLKTEEEQFAKTLEQGLKILEQDLAGLQGSVIPGDVVFKLY 397

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFP+DLT  +A ER L VD EGF   M+  RER+RSA       A  MD +A     
Sbjct: 398 DTYGFPVDLTADIARERELSVDEEGFEREMEAQRERARSAS------AFGMDYNA----- 446

Query: 527 KRGVLATDDSFKFIWFQDHKSV--IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
              ++  D   +F+ ++       I A++     ++S+  G E  +VL  + FYAE GGQ
Sbjct: 447 ---LVKVDADTRFLGYEGTSGSGKIIALFKAGSAVDSLAEGEEGVVVLDQTPFYAESGGQ 503

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           + D G++E     F VR+    GG  +H G + +G    SVG  V  + +   R+  A N
Sbjct: 504 VGDCGYLESAGVRFDVRDTTKAGGAFLHHGVVVKGG--LSVGASVKAEAEAGVRQATALN 561

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ ALR+VLGDHV QKGS+V  ++LRFDFSH + + PE ++++E IVN +I+  
Sbjct: 562 HSATHLLHAALRQVLGDHVQQKGSLVDSQRLRFDFSHFEAIKPEQIKQLEDIVNAEIRKN 621

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
            +V ++E  +  AK   G  A+FGE Y D VRV+++G                  S ELC
Sbjct: 622 SEVQTEETDIETAKA-KGAMALFGEKYGDQVRVLSMGG---------------DFSVELC 665

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGS 824
           GGTH+S T +   F + SE G+A G+RRI AVT   A      A    KEV  AS ++GS
Sbjct: 666 GGTHVSRTGDIGLFKITSEGGVAAGVRRIEAVTGAAALAWLNGAEEQLKEV--ASLVKGS 723

Query: 825 LLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEV-----------GL 873
              ++ V      + E N Q   ++    A+AA++ G     S V+V           GL
Sbjct: 724 ---RDNVLDKLSALIERNRQLEKELEQLKAKAASAAGNDLARSAVDVKGTKVLAARLDGL 780

Query: 874 DAAAVREAVLKVIEQKGMPVMVFST--DETTNKAVVCAGVPEKSDQSKQLEVSEWLTAAL 931
           D  A+   V ++  + G  V++     DE   K V+ AGV +  D + +++  + L    
Sbjct: 781 DGKALLALVDQLKNKLGSAVILLGGVFDE---KVVLVAGVTQ--DLTAKVKAGD-LMRQA 834

Query: 932 QPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAA 964
             + G  G G+  +A G G DA ++  A+ LAA
Sbjct: 835 AAVVGGKGGGRPDMAQGGGVDAGKLDEALALAA 867


>gi|191171366|ref|ZP_03032915.1| alanyl-tRNA synthetase [Escherichia coli F11]
 gi|190908300|gb|EDV67890.1| alanyl-tRNA synthetase [Escherichia coli F11]
          Length = 876

 Score =  607 bits (1564), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 365/936 (38%), Positives = 523/936 (55%), Gaps = 91/936 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  K +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + ++++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   SF V + Q YG  + HIG L   AG   VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A G+RRI AVT   A     A      EV         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATVHADSERLSEVAHLLKGDSNN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            A K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKLR 972
           + G G+  +A   GTDA  +  A+     + + KL+
Sbjct: 842 KGG-GRPDMAQAGGTDATALPAALASVKGWVSAKLQ 876


>gi|156975767|ref|YP_001446674.1| alanyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
 gi|205830285|sp|A7MYT5.1|SYA_VIBHB RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|156527361|gb|ABU72447.1| hypothetical protein VIBHAR_03511 [Vibrio harveyi ATCC BAA-1116]
          Length = 865

 Score =  607 bits (1564), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 373/920 (40%), Positives = 516/920 (56%), Gaps = 93/920 (10%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR+ F KFFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRNAFLKFFESKGHQIVESSSLVPHNDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT+  +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIAFAWEFLTETLKL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           PADRL  T +          D+EA DIW K   +PA R++  G K        DNFW+MG
Sbjct: 122 PADRLLVTVY--------ETDDEAFDIWNKKVGVPADRIIRIGDKKGGKPFESDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
           DTGPCGPC+EI YD      G R        D    IEIWN VF+QFNR++DG+++PLP 
Sbjct: 174 DTGPCGPCTEIFYDHGEHIWGGRPGTP--EEDGDRFIEIWNNVFMQFNRQADGTMEPLPK 231

Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
             VDTG+G ER+++I+Q   SNY+ DVF  +  A  +  G    S           + + 
Sbjct: 232 PSVDTGMGIERISAIMQGVHSNYEIDVFQALIKAAAEVIGYEDLS-----------NQSL 280

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RV+ADHIR+ SF I DG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF+ LV ++ +
Sbjct: 281 RVIADHIRSCSFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGAFFHKLVGVLAE 339

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKA-----AQDVQGKVLSGQDA 462
           +MG    ELK+++A + +++  EE +FG+TL +G+    +A     +Q   GKVL G+  
Sbjct: 340 IMGTAGEELKRQQAVVEKVLRIEEENFGRTLERGMAILNEALDNISSQGTDGKVLDGETV 399

Query: 463 FILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADAT 522
           F L+DTYGFP DLT  +A ER   +D EGF  AM+E R+R+R A N           D  
Sbjct: 400 FKLYDTYGFPADLTNDVAREREFAIDEEGFEKAMEEQRQRAREAGN--------FGTDYN 451

Query: 523 AALHKRGVLATDDSFKFIWFQDHK--SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAE 580
           AA+        D   +F  +   K  S + A++     +ES+  G++  IVL  + FYAE
Sbjct: 452 AAIK------VDTQTEFCGYTGTKGSSSVAAMFVEGNEVESLSAGDKAIIVLGETPFYAE 505

Query: 581 QGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
            GGQ  D G I    G F V + Q  G  + H G + EG    + G+EV   VD +RR  
Sbjct: 506 SGGQCGDAGEIRTESGVFRVEDTQKLGNAIAHHGVMAEGV--LAKGDEVATIVDAERRAA 563

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           I+ NH+ TH+L+ ALR++LG+HV QKGS+V  + LRFDFSH + V    L+ +E +VN Q
Sbjct: 564 ISLNHSATHLLHAALRQLLGEHVTQKGSLVKADGLRFDFSHLEAVTAAELKEVERLVNAQ 623

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I+    + +    +  AK   G  A+FGE Y D VRV+++G                  S
Sbjct: 624 IRRNHVIETNVMDIESAKK-KGAMALFGEKYDDEVRVLSMG----------------DFS 666

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK 820
            ELCGG H S+T +   F + SE GIA GIRRI AVT   A  A EA  +  +E    S 
Sbjct: 667 TELCGGIHASSTGDIGLFKITSEGGIAAGIRRIEAVTGEGALDAIEAQAAKYEEKLAESA 726

Query: 821 IEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVRE 880
            +   LEK +++K + K+A      A + A    +    NG    I+ +E G D   +R 
Sbjct: 727 QKAKSLEK-EIQKLKDKMA------AAESANIMGKVQDINGTKVLIAALE-GADNKNLRT 778

Query: 881 AVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGK 940
            V  +  Q G  V++ + +   +K  + AGV +  D   +++  + +    + + G+ G 
Sbjct: 779 MVDDIKNQVGSGVILLA-NVNDDKIGLIAGVTK--DLIGKVKAGDLVKMVAEQVGGKGG- 834

Query: 941 GKGGLASGQGTDAAQVTPAM 960
           G+  +A   GTD A +  A+
Sbjct: 835 GRPDMAQAGGTDVAALPAAI 854


>gi|269140202|ref|YP_003296903.1| alanyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|387868720|ref|YP_005700189.1| alanyl-tRNA synthetase [Edwardsiella tarda FL6-60]
 gi|267985863|gb|ACY85692.1| alanyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|304560033|gb|ADM42697.1| Alanyl-tRNA synthetase [Edwardsiella tarda FL6-60]
          Length = 875

 Score =  606 bits (1563), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 361/932 (38%), Positives = 521/932 (55%), Gaps = 85/932 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  F+  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    +      +R
Sbjct: 7   EIRQAFLDFYHSKGHQVVDSSSLVPNNDPTLLFTNAGMNQFKDVFLGIDKRS-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI +AWELLT  + +
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAINFAWELLTGAQWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP ++L+ T +          D+EA DIW     +P  R++  G         DNFW+M
Sbjct: 122 NLPKEKLWVTVY--------ESDDEAYDIWANEVGVPRERIIRIGDNKGAAYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGNRDAA--SLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +         + D    IEIWNIVF+QFNR+SDG+L PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGAHIAGGPPGSPDEDGDRYIEIWNIVFMQFNRQSDGTLLPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +     +  G    S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIAETARVIGVSDLSSK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F ++DG  P NEGR YVLRRI+RRAVR+G  +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLVSDGVLPSNEGRGYVLRRIIRRAVRHG-HMLGAKEAFFYKLVKPLIAV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG     L Q++A + +++  EE  F +TL +G+         + G  L G+ AF L+DT
Sbjct: 342 MGSAADALAQQQAMVEQVLKTEEEQFARTLERGLTLLDDELSTLDGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFPLDLT  +  ERGL VD EGF  AM+  R R+R +            AD  + +   
Sbjct: 402 YGFPLDLTADVCRERGLKVDEEGFERAMEAQRRRARESSG--------FGADYNSMIRVD 453

Query: 529 GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDE 588
           G  +TD  F     Q   +++ A++   + ++++  G E  +VLA + FYAE GGQ+ D 
Sbjct: 454 G--STD--FTGYHLQQQDALVTALFHNGQAVDALQAGEEGVVVLAQTPFYAESGGQVGDR 509

Query: 589 GFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
           G +      F V + Q YG  + H+G + +G+ R  VGE V   +D  RR+ I  +H+ T
Sbjct: 510 GELTAQGCRFVVEDTQKYGQAIGHLGKVAQGSLR--VGERVQASIDGARRERIRQSHSAT 567

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+++ ALR VLG+HV QKGS+V    LRFDFSH + + P+ +R++E IVN QI+  L + 
Sbjct: 568 HLMHAALRSVLGEHVAQKGSLVSDGALRFDFSHAEAMKPQQIRQVEDIVNAQIRRNLPID 627

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
           ++E  L EAK   G  A+FGE Y   VRV+++G                  S ELCGGTH
Sbjct: 628 TQEMGLEEAKA-KGAMALFGEKYDAQVRVLSMG----------------DFSTELCGGTH 670

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDD---------AS 819
              T +   F ++SE G A G+RRI AVT   A  A      + +E            A 
Sbjct: 671 AERTGDIGLFRIVSESGTAAGVRRIEAVTGEQALLAMHQESDMLREAASLVKGDAQSVAE 730

Query: 820 KIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVR 879
           KI   + +  Q+ KA +++ ++  Q A + A+ + +A   NG    +S+++ G++   +R
Sbjct: 731 KIRAVMEKSRQLEKALQQLKDQ--QAAQESASLSGKAVEVNGVKLLVSQLD-GVEPKMLR 787

Query: 880 EAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCG 939
             V  +  Q G  ++V +T E   K  + AGV +  D + +++  E +    Q + G+ G
Sbjct: 788 TMVDDLKNQMGSCIVVLATAE-AGKVSLIAGVTK--DLTAKVKAGELIGMVAQQVGGK-G 843

Query: 940 KGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
            G+  +A   GTDAA +  A+    ++ A KL
Sbjct: 844 GGRPDMAQAGGTDAAALPQALASVTDWVAAKL 875


>gi|262273675|ref|ZP_06051488.1| alanyl-tRNA synthetase [Grimontia hollisae CIP 101886]
 gi|262222090|gb|EEY73402.1| alanyl-tRNA synthetase [Grimontia hollisae CIP 101886]
          Length = 860

 Score =  606 bits (1563), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 373/923 (40%), Positives = 518/923 (56%), Gaps = 82/923 (8%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F +FFE K H    SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EIRRAFLEFFESKGHAIVSSSSLVPANDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT+V +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAISFAWEFLTEVLKL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           P +RL  T +          D+EA  +W +   +PA R++  G K        DNFW+MG
Sbjct: 122 PKERLMVTVY--------ETDDEAFALWNEKIGIPADRIVRIGDKKGGKPYESDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKH 289
           DTGPCGPC+EI YD   +           D    IEIWN VF+Q+NR +DG+++PLP   
Sbjct: 174 DTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRFIEIWNNVFMQYNRHADGTMEPLPKPS 233

Query: 290 VDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRV 349
           VDTG+G ER+ +I+Q   SNY+ DVF  +  +  +          +G DD    + + RV
Sbjct: 234 VDTGMGIERIAAIMQGVHSNYEIDVFQTLIKSAAEV---------IGYDDLS--NQSLRV 282

Query: 350 VADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVM 409
           VADHIR+ +F I DG  P NEGR YVLRRI+RRAVR+G++ L A   FF  LV  + +VM
Sbjct: 283 VADHIRSCAFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGATGAFFYKLVGPLAEVM 341

Query: 410 GDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTY 469
           G    ELK+++A + +++  EE +FG+TL +G+     A + + GKVL G+  F L+DTY
Sbjct: 342 GSAGEELKKQQAVVEKVLKIEEENFGRTLDRGMAILNDALEALDGKVLDGETVFKLYDTY 401

Query: 470 GFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRG 529
           GFP DLT  +A ERG  +D EGF  AM+  R+R+R A         V+  D  +A    G
Sbjct: 402 GFPADLTNDVARERGFSIDEEGFEAAMEAQRQRAREAGQFGTDYNAVIKVDGESAFTGYG 461

Query: 530 VLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEG 589
                         + + +I  I+      E++   +E  I+L  + FYAE GGQ  D G
Sbjct: 462 A------------TEGEGLITNIFVDGMASEALATADEAVIILDQTPFYAESGGQCGDTG 509

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
           F+    G F V + Q YG  + H G L +G    SVG+ V  KVD +RR+ IA NH+ TH
Sbjct: 510 FLVTEAGKFEVIDTQKYGAAIGHRGKLVDGT--LSVGDTVDAKVDAERRQAIALNHSATH 567

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +L+ ALR VLG+HV QKGS+V  E LRFDFSH + V PE LR +E +VNE I+   +V S
Sbjct: 568 LLHEALRVVLGEHVQQKGSLVRAEGLRFDFSHLEAVKPEELRAVEKLVNEHIRRNHEV-S 626

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
            E    EA    G  A+FGE Y D VRV+ +G                  S ELCGGTH 
Sbjct: 627 TEIMNIEAAKAKGAMALFGEKYDDNVRVLTMG----------------DFSIELCGGTHA 670

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACS-LEKEVDDASKIEGSLLEK 828
           + T +     ++SE GIA G+RRI AVT   A +AF +      K+V + S+    LLEK
Sbjct: 671 NRTGDIGMLKIVSEGGIAAGVRRIEAVTGQGAEEAFYSQQQEFAKKVSE-SQNRARLLEK 729

Query: 829 NQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQ 888
            +++  ++K+A +     +    E       NG    IS+++ G D+ A+R  V  +  Q
Sbjct: 730 -EIQLLKEKLAAQESANLINNVEEI------NGIKVLISKLD-GADSKALRTMVDDLKNQ 781

Query: 889 KGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASG 948
            G  V VF  +   +K  + AGV +  D + +++  E +    Q + G+ G G+  +A  
Sbjct: 782 MGSGV-VFLANVADDKVGLIAGVTK--DLTGKVKAGELVNMVAQQVGGKGG-GRPDMAQA 837

Query: 949 QGTDAAQVTPAMDLAAEFAAMKL 971
            G+D A +  A+   + + A +L
Sbjct: 838 GGSDVAALPAALASVSPWLAERL 860


>gi|407451100|ref|YP_006722824.1| alanyl-tRNA synthetase [Riemerella anatipestifer RA-CH-1]
 gi|403312084|gb|AFR34925.1| Alanyl-tRNA synthetase [Riemerella anatipestifer RA-CH-1]
          Length = 867

 Score =  606 bits (1563), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 347/871 (39%), Positives = 491/871 (56%), Gaps = 73/871 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R  F  FF+ K H+   S+P+V  +DPTL+F+N+GM Q+K  FLG   P     K 
Sbjct: 3   SQQIRQAFLDFFKSKEHLIVPSAPIVLKDDPTLMFSNSGMTQFKDYFLGYKTP-----KA 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  +TQKC+R  GKHNDLDDVG+DTYHHT FEMLGNWSFG+YFK EAI +AWELLT+VY
Sbjct: 58  PRIADTQKCLRVSGKHNDLDDVGRDTYHHTMFEMLGNWSFGNYFKKEAIAFAWELLTEVY 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           ++P + LY T F GD    L  D EA + W  ++   R+L    KDNFWEMG++GPCGPC
Sbjct: 118 KIPKENLYVTIFEGDATENLERDQEAYNCWKSYIAEDRILNGNKKDNFWEMGESGPCGPC 177

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + +      LVN D P  IE+WN+VF++FNR++DGSL+ LPA+HVDTG+
Sbjct: 178 SEIHIDLRSEEEKSKVSGKDLVNQDHPQVIEVWNLVFMEFNRKADGSLEKLPAQHVDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF P+   ++Q +  + Y G +   D +K D+A RVV DHI
Sbjct: 238 GFERLCMALQGKTSNYDTDVFTPLIAKVEQLS-HKKYEGLL---DNEK-DIAIRVVVDHI 292

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R +SFAIADG  P N G  YV+RRILRRA+ Y    L  ++ F   LV ++   MG  FP
Sbjct: 293 RAVSFAIADGQLPSNTGAGYVIRRILRRAISYSYRFLDMKEAFLYELVAVLKNQMGAFFP 352

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG---KVLSGQDAFILWDTYGF 471
           E++++E  + E+I  EE SF KT+  G+ + +   Q+      K L G + F L+DTYGF
Sbjct: 353 EIEKQEKLVTEVIKEEENSFLKTIEHGLVRLENIIQETLKKGEKTLPGAEVFELYDTYGF 412

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           P DL++++AEE+GL VD +GF+  M++ ++RS+ +  ++    + +              
Sbjct: 413 PADLSRIIAEEKGLTVDEKGFDEEMEKQKQRSKKSSAQKVYDWVTL-------------- 458

Query: 532 ATDDSFKFIWFQ--DHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEG 589
             D++  F+ +   +HK  I   Y   E  + V       +V   + FYAE GGQ+ D+G
Sbjct: 459 -KDETESFVGYDQLEHKVFITK-YRKLENKDGVF----YQVVFNQTPFYAEGGGQVGDKG 512

Query: 590 FIEGLFGSFYVRNVQIYGGFVIH-IGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
           +IE   G F V + +      I  I  L +   +     E    VD   R+    NH+ T
Sbjct: 513 YIESEEGQFEVLDTKKENNLNISLIKDLPQAPEK-----EFTAVVDSRLRRNTQANHSAT 567

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+L+ ALREVLG HV+QKGS V  + LRFDFSH   +  E +  +E  VN +IK  + + 
Sbjct: 568 HLLHEALREVLGTHVEQKGSFVGADYLRFDFSHFSKMSDEEIALVEEKVNAKIKENISLQ 627

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
                  +     G  A+FGE Y D VR++  G                  S ELCGGTH
Sbjct: 628 EYRNIPIQEALDKGAMALFGEKYGDNVRMIQFGS-----------------SKELCGGTH 670

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFE------AACSLEKEVDDASKIE 822
             +T E   F ++SE   A GIRRI A+++  A   F+      A  SL  +  D  K  
Sbjct: 671 AKSTSEIGLFKIVSESSTAAGIRRIEAISSEKANAYFKELEEQMAQLSLVLKTKDVQKSV 730

Query: 823 GSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAV 882
             LLE+NQ  K++ +  ++ L K  + A    +  +  GK   +      LDAA+V++ V
Sbjct: 731 EKLLEENQKLKSELEAIKKELAKN-ETADWKNQFVSKEGKNLLVKM--TSLDAASVKDIV 787

Query: 883 LKVIEQKGMPVMVFSTDETTNKAVVCAGVPE 913
            ++ ++    V+V  +D    K ++  GV +
Sbjct: 788 FQLKKEVPTSVIVILSD-ANEKPMISVGVSD 817


>gi|386078229|ref|YP_005991754.1| alanyl-tRNA synthetase AlaS [Pantoea ananatis PA13]
 gi|354987410|gb|AER31534.1| alanyl-tRNA synthetase AlaS [Pantoea ananatis PA13]
          Length = 875

 Score =  606 bits (1563), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 360/919 (39%), Positives = 516/919 (56%), Gaps = 81/919 (8%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    +      TR
Sbjct: 7   EIRQAFLDFFNSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGQEKRD-----YTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK EAI +AWELLT  + +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKKEAIAFAWELLTGEQWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFWEM 230
           +LP +RL+ T +          D+EA DIW   +  P  R++  G         DNFW+M
Sbjct: 122 KLPKERLWVTVY--------ETDDEAYDIWANDIGVPRERIIRIGDNKGSAYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPCSEI YD   +           D    IEIWNIVF+QFNR++DG++ PLP  
Sbjct: 174 GDTGPCGPCSEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMLPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+T++LQ+  SNY+ D+F  + +A+ + TGA   + K           + R
Sbjct: 234 SVDTGMGLERITAVLQHVNSNYEIDLFQTLIEAVAKVTGATDLNNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A+D FF  LV  +++V
Sbjct: 283 VIADHIRSCAFLIADGVIPSNENRGYVLRRIIRRAVRHGN-MLGAKDAFFYKLVAPLIQV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    EL++++A +  ++ +EE  F KTL +G+    +    +QG  L G+  F L+DT
Sbjct: 342 MGAAGEELQRQQAQVENVLKSEEEQFAKTLERGLALLDEELAKLQGDTLDGETVFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           +GFP DLT  +  ER L +D  GF  AM++ R+R+R A    A  + V+  DA +     
Sbjct: 402 FGFPADLTADVCRERNLKIDEAGFEKAMEQQRQRAREASGFGADYSNVIRIDAAS----- 456

Query: 529 GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDE 588
                  SFK     D  + +KA++   E ++++  G +  IVL  + FY E GGQ+ D 
Sbjct: 457 -------SFKGYEQLDLTATVKALFVNGEAVDALSAGQDAVIVLDETPFYGESGGQVGDT 509

Query: 589 GFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
           G ++G    F V++ Q YG  + HIG L+  +G+  VG+ +   VD  RR  I  NH+ T
Sbjct: 510 GELKGNNALFSVQDTQKYGQAIGHIGKLS--SGQLRVGDRLEAVVDEARRARIRLNHSAT 567

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+L+ ALR+VLG+HV QKGS+V  + LRFDFSH + + P+ +R++E IVN QI+  L V 
Sbjct: 568 HLLHAALRQVLGEHVAQKGSLVNDKYLRFDFSHFEAMKPQEIRQVEDIVNAQIRRNLPVE 627

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
           ++   L  AK   G  A+FGE Y   VRV+ +G                  S ELCGGTH
Sbjct: 628 TRVMDLEAAKA-KGAMALFGEKYDQQVRVLTMG----------------DFSVELCGGTH 670

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEK 828
            + T +   F + +E G A GIRRI A+T   A     A  S  +++    K   S L +
Sbjct: 671 AARTGDIGLFRIQAESGTAAGIRRIEAITGEAALAQVYAQSSQLQDIAQLVKANSSNLNE 730

Query: 829 ------NQVRKAQKKVAEENLQKAVKVATETAEAAAS-NGKPFCISRVEVGLDAAAVREA 881
                 + +R  +K++ +   Q+A + + +    A    G    ++ +    D   +R  
Sbjct: 731 KVRGLVDHLRSLEKELQQLRDQQAAQESAQLGNHAVDVKGVKLLVTELS-NTDPKMLRTM 789

Query: 882 VLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKG 941
           V  +  Q G  ++V +T     K  + AGV +  D + +++  E L A L P  G  G G
Sbjct: 790 VDDLKNQLGSAIIVLAT-VADGKVSLIAGVTK--DLTDRVKAGE-LIAELAPKVGGKGGG 845

Query: 942 KGGLASGQGTDAAQVTPAM 960
           +  +A   G+DA  +  A+
Sbjct: 846 RPDMAQAGGSDATALKGAL 864


>gi|205830256|sp|A4XWE2.2|SYA_PSEMY RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
          Length = 874

 Score =  606 bits (1563), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 377/938 (40%), Positives = 530/938 (56%), Gaps = 92/938 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F  FFE+K H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLSFFEEKGHTRVASSSLIPANDPTLLFTNAGMNQFKDCFLGL-----EKRAY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           TRA  +QKC+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT  K
Sbjct: 58  TRATTSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWEFLTSDK 117

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFW 228
              LP ++L+ T +        A D+EA +IW K +  PA R++  G         DNFW
Sbjct: 118 WLNLPKEKLWVTVY--------ATDDEAYEIWNKEIGVPAERMIRIGDNKGAPYASDNFW 169

Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
            MGDTGPCGPC+EI +D   +           D    IEIWN VF+QFNR +DG L PLP
Sbjct: 170 AMGDTGPCGPCTEIFFDHGEHIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLP 229

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
           A  VDTG+G ER++++LQ+  SNY+ D+F  +  A  +A G            A++   +
Sbjct: 230 APSVDTGMGLERISAVLQHVNSNYEIDLFQNLLAASAKAIGC-----------ANEGQAS 278

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            +VVADHIR+ SF IADG  P NEGR YVLRRI+RRA R+G++ L A+  FF  +V  +V
Sbjct: 279 LKVVADHIRSCSFLIADGVTPSNEGRGYVLRRIVRRACRHGNK-LGAKGSFFYQIVAALV 337

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
             MG+ FPELKQ++AHI  ++  EE  F KTL +G++  ++    +QG V+ G   F L+
Sbjct: 338 AEMGEAFPELKQQQAHIERVLKTEEEQFAKTLEQGLKILEQDLAGLQGSVIPGDIVFKLY 397

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFP+DLT  +A ER L VD EGF   M+  RER+RSA       A  MD +A     
Sbjct: 398 DTYGFPVDLTADIARERELSVDEEGFEREMEAQRERARSAS------AFGMDYNA----- 446

Query: 527 KRGVLATDDSFKFIWFQ--DHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
              ++  D   +F+ ++       I A++     ++S+  G E  +VL  + FYAE GGQ
Sbjct: 447 ---LVKVDADTRFLGYEGTSGSGKIIALFKAGAAVDSLAEGEEGVVVLDQTPFYAESGGQ 503

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           I D G++E     F VR+    GG  +H G + +G    SVG  V  + +   R+  A N
Sbjct: 504 IGDCGYLESAGMRFDVRDTTKAGGAFLHHGVVAKGG--LSVGTSVKAEAEASVRQATALN 561

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ ALR+VLGDHV QKGS+V  ++LRFDFSH + + PE L+++E IVN +I+  
Sbjct: 562 HSATHLLHAALRQVLGDHVQQKGSLVDSQRLRFDFSHFEAIKPEQLKQLEDIVNAEIRKN 621

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
            +V ++E  +  AK   G  A+FGE Y D VRV+++G                  S ELC
Sbjct: 622 SEVETEETDIETAKA-KGAMALFGEKYGDQVRVLSMGG---------------DFSVELC 665

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAF--------EAACSLEKEVD 816
           GGTH+S T +   F + SE G+A G+RRI AVT   A            EAA  ++   D
Sbjct: 666 GGTHVSRTGDIGLFKITSEGGVAAGVRRIEAVTGAAALAWLNAAEEQLKEAASLVKGSRD 725

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAAS-NGKPFCISRVEVGLDA 875
           +      +L+E+N  R+ +K++ +   + A     + A +A    G     +R++ GLD 
Sbjct: 726 NVLDKLSALIERN--RQLEKELEQLKAKAASAAGNDLAGSAVDLKGTKVLAARLD-GLDG 782

Query: 876 AAVREAVLKVIEQKGMPVMVFST--DETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQP 933
            A+   V ++  + G  V++     DE   K V+ AGV +  D + +L+  + L      
Sbjct: 783 KALLALVDQLKNKLGSGVILLGGVFDE---KVVLVAGVTQ--DLTAKLKAGD-LMRQAAA 836

Query: 934 LKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
             G  G G+  +A G G DA ++  A+ LAA F    L
Sbjct: 837 AVGGKGGGRPDMAQGGGVDAGKLDEALALAATFVEQGL 874


>gi|429751934|ref|ZP_19284823.1| alanine--tRNA ligase [Capnocytophaga sp. oral taxon 326 str. F0382]
 gi|429178369|gb|EKY19648.1| alanine--tRNA ligase [Capnocytophaga sp. oral taxon 326 str. F0382]
          Length = 877

 Score =  606 bits (1563), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 356/886 (40%), Positives = 502/886 (56%), Gaps = 78/886 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F KFFE K H    S+P+V  NDPTL+F NAGMNQ+K  FLG A P     K 
Sbjct: 3   SQEIRNLFLKFFESKGHTIVPSAPMVIKNDPTLMFTNAGMNQFKEFFLGHAKP-----KH 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  +TQKC+R  GKHNDL++VG+DTYHHT FEMLGNWSFGDYFK EAI WAWELLT++Y
Sbjct: 58  KRVADTQKCLRVSGKHNDLEEVGRDTYHHTMFEMLGNWSFGDYFKREAISWAWELLTEIY 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           ++P + LY T F G E+ G+  D EA DIW + +    +L    KDNFWEMGD GPCGPC
Sbjct: 118 KIPKENLYVTIFEGSEEDGVPFDQEAFDIWKERIAEDHILLGNKKDNFWEMGDQGPCGPC 177

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           +EIH D   + + A      LVNND P  IEIWN VF++FNR++DGSL+ LP+++VDTG+
Sbjct: 178 TEIHVDIRSDEEKAKVPGRDLVNNDHPQVIEIWNNVFMEFNRKADGSLEKLPSRNVDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL  +LQNK SNYDTDVF P+   +++ T +   S      + + +++A RV++DHI
Sbjct: 238 GFERLCMVLQNKQSNYDTDVFTPLIHKVEEITKSHYNSNGRVTPEQEHINIAIRVISDHI 297

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R ++FAIADG  P N G  YV+RRILRRA+RYG   L  ++ F   LV  +   MG  FP
Sbjct: 298 RAVAFAIADGQLPSNNGAGYVIRRILRRAIRYGFTFLNQKEPFIYKLVETLAAQMGATFP 357

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLD 474
           EL++++  I  +I  EEASF +TL +G+       Q+   K LSG  AF L+DTYGFP D
Sbjct: 358 ELEKQQLLIMSVIKEEEASFLRTLEQGLLMLDVMIQNSPDKQLSGGKAFELYDTYGFPKD 417

Query: 475 LTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATD 534
           LT L+  E+GL +D EGF   + + +ERSR+A   +    +              VL  D
Sbjct: 418 LTALILSEKGLTMDEEGFEVQLQKQKERSRAAAQVKTDDWV--------------VLRND 463

Query: 535 DSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGL 594
           D  +FI +   ++V++ +      +ES   G    +V  ++ FY E GGQ+ D+G ++  
Sbjct: 464 DEEEFIGYDALEAVVRLVKYRR--VESQKDGTHFQLVFNTTPFYPEGGGQVGDKGTLQAA 521

Query: 595 FGSF-YVRNVQIYGGFVIHIGSL--TEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHML 651
            G   Y+ + +     +IHI     TE    F        +V    R++   NH+ TH+L
Sbjct: 522 NGELIYILDTKKENNLIIHIAEHLPTELNDPFK------AEVHSVAREMAEANHSATHLL 575

Query: 652 NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKE 711
           + ALREVLG HV+QKGS V PE LRFDFSH   +  + L+ +E +VN++I  ++ +    
Sbjct: 576 HQALREVLGTHVEQKGSRVAPEALRFDFSHFAKLTSDELKEVERLVNKRIFEKIPLQEHR 635

Query: 712 ATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSN 771
               +    +G  A+FGE Y D VR++  G                  S ELCGGTH+ N
Sbjct: 636 NIPIQQAVESGAMALFGEKYGDRVRMIQFGD-----------------SKELCGGTHVKN 678

Query: 772 TREAEAFALLSEEGIAKGIRRITAVTTGLAYKAF-------EAACSLEKEVDDASKIEGS 824
           T +   F ++SE  +A GIRRI A+T G A + F       E      K   D  K    
Sbjct: 679 TGDIWFFKIISEGAVAAGIRRIEAITRGGAMQYFIEQEQLVERIKETVKNTQDPVKAITH 738

Query: 825 LLEKN--------QVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
           L E+N        Q++K Q K  + NL+         AE    NG    I +V+   + A
Sbjct: 739 LQEENVALHRELEQLKKEQAKQLKANLK---------AEFTEINGIQCLIKQVDA--EVA 787

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLE 922
            +++   ++  +     + F++     KA++   + ++  Q+K L+
Sbjct: 788 TLKDLAFELGNEVKNAFVFFASAHEEGKALLLCYINKELAQAKGLD 833


>gi|442315731|ref|YP_007357034.1| Alanyl-tRNA synthetase [Riemerella anatipestifer RA-CH-2]
 gi|441484654|gb|AGC41340.1| Alanyl-tRNA synthetase [Riemerella anatipestifer RA-CH-2]
          Length = 867

 Score =  606 bits (1562), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 346/871 (39%), Positives = 491/871 (56%), Gaps = 73/871 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R  F  FF+ K H+   S+P+V  +DPTL+F+N+GM Q+K  FLG   P     K 
Sbjct: 3   SQQIRQAFLDFFKSKEHLIVPSAPIVLKDDPTLMFSNSGMTQFKDYFLGYKTP-----KA 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  +TQKC+R  GKHNDLDDVG+DTYHHT FEMLGNWSFG+YFK EAI +AWELLT+VY
Sbjct: 58  PRIADTQKCLRVSGKHNDLDDVGRDTYHHTMFEMLGNWSFGNYFKKEAIAFAWELLTEVY 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           ++P + LY T F GD    L  D EA + W  ++   R+L    KDNFWEMG++GPCGPC
Sbjct: 118 KIPKENLYVTIFEGDATENLERDQEAYNCWKSYIAEDRILNGNKKDNFWEMGESGPCGPC 177

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + +      LVN D P  IE+WN+VF++FNR++DGSL+ LPA+HVDTG+
Sbjct: 178 SEIHIDLRSEEEKSKVSGKDLVNQDHPQVIEVWNLVFMEFNRKADGSLEKLPAQHVDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF P+   ++Q +  + Y G +   D +K D+A RVV DHI
Sbjct: 238 GFERLCMALQGKTSNYDTDVFTPLIAKVEQLS-HKKYEGLL---DNEK-DIAIRVVVDHI 292

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R +SFAIADG  P N G  YV+RRILRRA+ Y    L  ++ F   LV ++   MG  FP
Sbjct: 293 RAVSFAIADGQLPSNTGAGYVIRRILRRAISYSYRFLDMKEAFLYELVAVLKNQMGAFFP 352

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG---KVLSGQDAFILWDTYGF 471
           E++++E  + E+I  EE SF KT+  G+ + +   Q+      K L G + F L+DTYGF
Sbjct: 353 EIEKQEKLVTEVIKEEENSFLKTIEHGLVRLENIIQETLKKGEKTLPGAEVFELYDTYGF 412

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           P DL++++AEE+GL VD +GF+  M++ ++RS+ +  ++    + +              
Sbjct: 413 PADLSRIIAEEKGLTVDEKGFDEEMEKQKQRSKKSSAQKVYDWVTL-------------- 458

Query: 532 ATDDSFKFIWFQ--DHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEG 589
             D++  F+ +   +HK  I   Y   E  + V       +V   + FYAE GGQ+ D+G
Sbjct: 459 -KDETESFVGYDQLEHKVFITK-YRKLENKDGVF----YQVVFNQTPFYAEGGGQVGDKG 512

Query: 590 FIEGLFGSFYVRNVQIYGGFVIH-IGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
           +IE   G F V + +      I  I  L +   +     E    VD   R+    NH+ T
Sbjct: 513 YIESEEGQFEVLDTKKENNLNISLIKDLPQAPEK-----EFTAVVDSRLRRNTQANHSAT 567

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+L+ ALREVLG HV+QKGS V  + LRFDFSH   +  E +  +E  VN +IK  + + 
Sbjct: 568 HLLHEALREVLGTHVEQKGSFVGADYLRFDFSHFSKMSDEEIALVEEKVNAKIKENISLQ 627

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
                  +     G  A+FGE Y D VR++  G                  S ELCGGTH
Sbjct: 628 EYRNIPIQEALDKGAMALFGEKYGDNVRMIQFGS-----------------SKELCGGTH 670

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFE------AACSLEKEVDDASKIE 822
             +T E   F ++SE   A GIRRI A+++  A   F+         SL  +  D  K  
Sbjct: 671 AKSTSEIGLFKIVSESSTAAGIRRIEAISSEKANAYFKELEEQMTQLSLALKTKDVQKSV 730

Query: 823 GSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAV 882
             LLE+NQ  K++ +  ++ L K  + A    +  +  GK   +      LDAA+V++ V
Sbjct: 731 EKLLEENQKLKSELEAIKKELAKN-ETADWKNQFVSKEGKNLLVKM--TSLDAASVKDIV 787

Query: 883 LKVIEQKGMPVMVFSTDETTNKAVVCAGVPE 913
            ++ ++    V+V  +D   +K ++  GV +
Sbjct: 788 FQLKKEVPTSVIVILSD-ANDKPMISVGVSD 817


>gi|386320981|ref|YP_006017143.1| alanyl-tRNA synthetase [Riemerella anatipestifer RA-GD]
 gi|416111799|ref|ZP_11592896.1| alanyl-tRNA synthetase [Riemerella anatipestifer RA-YM]
 gi|315022567|gb|EFT35594.1| alanyl-tRNA synthetase [Riemerella anatipestifer RA-YM]
 gi|325335524|gb|ADZ11798.1| Alanyl-tRNA synthetase [Riemerella anatipestifer RA-GD]
          Length = 867

 Score =  606 bits (1562), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 346/871 (39%), Positives = 491/871 (56%), Gaps = 73/871 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R  F  FF+ K H+   S+P+V  +DPTL+F+N+GM Q+K  FLG   P     K 
Sbjct: 3   SQQIRQAFLDFFKSKEHLIVPSAPIVLKDDPTLMFSNSGMTQFKDYFLGYKTP-----KA 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  +TQKC+R  GKHNDLDDVG+DTYHHT FEMLGNWSFG+YFK EAI +AWELLT+VY
Sbjct: 58  PRIADTQKCLRVSGKHNDLDDVGRDTYHHTMFEMLGNWSFGNYFKREAIAFAWELLTEVY 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           ++P + LY T F GD    L  D EA + W  ++   R+L    KDNFWEMG++GPCGPC
Sbjct: 118 KIPKENLYVTIFEGDATENLERDQEAYNCWKSYIAEDRILNGNKKDNFWEMGESGPCGPC 177

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + +      LVN D P  IE+WN+VF++FNR++DGSL+ LPA+HVDTG+
Sbjct: 178 SEIHIDLRSEEEKSKVSGKDLVNQDHPQVIEVWNLVFMEFNRKADGSLEKLPAQHVDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF P+   ++Q +  + Y G +   D +K D+A RVV DHI
Sbjct: 238 GFERLCMALQGKTSNYDTDVFTPLIAKVEQLS-HKKYEGLL---DNEK-DIAIRVVVDHI 292

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R +SFAIADG  P N G  YV+RRILRRA+ Y    L  ++ F   LV ++   MG  FP
Sbjct: 293 RAVSFAIADGQLPSNTGAGYVIRRILRRAISYSYRFLDMKEAFLYELVAVLKNQMGAFFP 352

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG---KVLSGQDAFILWDTYGF 471
           E++++E  + E+I  EE SF KT+  G+ + +   Q+      K L G + F L+DTYGF
Sbjct: 353 EIEKQEKLVTEVIKEEENSFLKTIEHGLVRLENIIQETLKKGEKTLPGAEVFELYDTYGF 412

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           P DL++++AEE+GL VD +GF+  M++ ++RS+ +  ++    + +              
Sbjct: 413 PADLSRIIAEEKGLTVDEKGFDEEMEKQKQRSKKSSAQKVYDWVTL-------------- 458

Query: 532 ATDDSFKFIWFQ--DHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEG 589
             D++  F+ +   +HK  I   Y   E  + V       +V   + FYAE GGQ+ D+G
Sbjct: 459 -KDETESFVGYDQLEHKVFITK-YRKLENKDGVF----YQVVFNQTPFYAEGGGQVGDKG 512

Query: 590 FIEGLFGSFYVRNVQIYGGFVIH-IGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
           +IE   G F V + +      I  I  L +   +     E    VD   R+    NH+ T
Sbjct: 513 YIESEEGQFEVLDTKKENNLNISLIKDLPQAPEK-----EFTAVVDSRLRRNTQANHSAT 567

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+L+ ALREVLG HV+QKGS V  + LRFDFSH   +  E +  +E  VN +IK  + + 
Sbjct: 568 HLLHEALREVLGTHVEQKGSFVGADYLRFDFSHFSKMSDEEIALVEEKVNAKIKENISLQ 627

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
                  +     G  A+FGE Y D VR++  G                  S ELCGGTH
Sbjct: 628 EYRNIPIQEALDKGAMALFGEKYGDNVRMIQFGS-----------------SKELCGGTH 670

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFE------AACSLEKEVDDASKIE 822
             +T E   F ++SE   A GIRRI A+++  A   F+         SL  +  D  K  
Sbjct: 671 AKSTSEIGLFKIVSESSTAAGIRRIEAISSEKANAYFKELEEQMTQLSLALKTKDVQKSV 730

Query: 823 GSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAV 882
             LLE+NQ  K++ +  ++ L K  + A    +  +  GK   +      LDAA+V++ V
Sbjct: 731 EKLLEENQKLKSELEAIKKELAKN-ETADWKNQFVSKEGKNLLVKM--TSLDAASVKDIV 787

Query: 883 LKVIEQKGMPVMVFSTDETTNKAVVCAGVPE 913
            ++ ++    V+V  +D   +K ++  GV +
Sbjct: 788 FQLKKEVPTSVIVILSD-ANDKPMISVGVSD 817


>gi|261415443|ref|YP_003249126.1| alanyl-tRNA synthetase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261371899|gb|ACX74644.1| alanyl-tRNA synthetase [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 882

 Score =  606 bits (1562), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 347/805 (43%), Positives = 475/805 (59%), Gaps = 80/805 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + +VR++F KFFE K H+  +SSPVVP +DPTL+F NAGMNQ+K IFLG  +P       
Sbjct: 7   SAQVRESFIKFFESKGHLFVRSSPVVPHDDPTLMFTNAGMNQFKAIFLGD-NPKG----W 61

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            RACN+QKC+R  GKHNDLD VG+D YHHTFFEMLGNWSFGDY+K EAI WAWELLT+V+
Sbjct: 62  KRACNSQKCLRVSGKHNDLDVVGRDNYHHTFFEMLGNWSFGDYYKKEAISWAWELLTEVW 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIW--LKFLPASRVLPFGCKDNFWEMGDTGPCG 237
           +LP +RL+AT +          D+EA  IW  +  LP  R++ F    NFWEMGDTGPCG
Sbjct: 122 KLPKERLFATVY--------QDDDEAWQIWKDVSGLPDDRIMRFDAHSNFWEMGDTGPCG 173

Query: 238 PCSEIHYDRTGN--------RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKH 289
           PCSEIHYDR G+        +D    VN ++   IEIWN VF+Q+ R SDGSL PL AK+
Sbjct: 174 PCSEIHYDR-GDLATQAETFKDPIKGVNGENDRYIEIWNNVFMQYERVSDGSLIPLKAKN 232

Query: 290 VDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRV 349
           VD G+GFER+ +ILQ K SNYDTDVF PI   I + +G     G+ G          +RV
Sbjct: 233 VDIGMGFERICAILQGKTSNYDTDVFTPIIAKIAELSGVPYNDGEAGT--------PHRV 284

Query: 350 VADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVM 409
           +ADHIR +SFAIADG+ P NEGR YVLRRILRRA R+ + +L  +  F   LV ++   M
Sbjct: 285 IADHIRAISFAIADGALPSNEGRGYVLRRILRRASRF-ARLLGQKKPFICQLVQVLADTM 343

Query: 410 GDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDT 468
           GD FPE+++R+  +  +I +EE SF +TL  G+E+F   + ++ +G  + G   F+L+DT
Sbjct: 344 GDAFPEIRERKEFVASVIKSEEESFIRTLDAGLERFAAISAELKKGDKIPGDKVFLLYDT 403

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRS--AQNKQAGGAIVMDADATAALH 526
           YGFP DLT ++AEE+GLL+D EG+   M+E +ER+R+   Q     G       + A+ +
Sbjct: 404 YGFPPDLTGILAEEKGLLIDEEGYEKCMNEQKERARANMKQGINTMGTEGWTQYSEASTN 463

Query: 527 KRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
             G   +    K + +++ K V+                    IVL +S FYAE GGQ+ 
Sbjct: 464 FVGYELSACETKVVRWREDKGVLS-------------------IVLETSPFYAEMGGQVG 504

Query: 587 DEGFIEG------LFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
           D+G +        +F +  V +  +  G V+  G   E     ++G   +  VD DRR  
Sbjct: 505 DKGTLVSADLEIQVFDTVKVNDTALCRGKVVK-GEANEK----TMGAVFMATVDNDRRAD 559

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           I  NH+ TH+L  ALREVLG HV Q+GS V  E LRFDFSH   +  E ++++E IVN +
Sbjct: 560 IRKNHSATHLLQAALREVLGTHVQQQGSFVSNELLRFDFSHFNAMTAEEIQKVEDIVNAK 619

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I   L V +    + EAK  +G  A+FGE Y D VRVV +G               +  S
Sbjct: 620 IMECLPVHTDVMDVDEAKA-SGAMALFGEKYGDKVRVVKMG------------DAGVEFS 666

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK 820
            ELCGG H+ NT       ++SE  ++ G+RRI AV+   A     A   +   + +  +
Sbjct: 667 RELCGGLHVQNTGNIGMVKIVSESSVSAGVRRIEAVSGRGALSLLRAGTQILNALREQLR 726

Query: 821 I-EGSLLEKNQVRKAQKKVAEENLQ 844
             +  +L++ Q   A+ +  E++LQ
Sbjct: 727 CKDAEVLDRIQQTFAKTQNLEKSLQ 751


>gi|381402648|ref|ZP_09927332.1| alanyl-tRNA synthetase [Pantoea sp. Sc1]
 gi|380735847|gb|EIB96910.1| alanyl-tRNA synthetase [Pantoea sp. Sc1]
          Length = 875

 Score =  605 bits (1561), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 360/919 (39%), Positives = 516/919 (56%), Gaps = 81/919 (8%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    +      TR
Sbjct: 7   EIRQAFLDFFHSKGHEVVTSSSLVPNNDPTLLFTNAGMNQFKDVFLGQDKRD-----YTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK EAI +AWELLT  + +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKKEAIGFAWELLTSEQWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA  IW K +  P  R++  G         DNFW+M
Sbjct: 122 GLPKERLWVTVY--------ETDDEAYAIWEKEIGVPRERIIRIGDNKGGAYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPCSEI YD   +           D    IEIWNIVF+QFNR++DG++ PLP  
Sbjct: 174 GDTGPCGPCSEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMLPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER++++LQ+  SNY+ D+F  +  A+ Q TGA   S K           + R
Sbjct: 234 SVDTGMGLERISAVLQHVNSNYEIDLFQKLIQAVAQVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  +V+V
Sbjct: 283 VIADHIRSCAFLIADGVIPSNESRGYVLRRIIRRAVRHGN-MLGAKEAFFYKLVAPLVEV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    EL++++A + +++ +EE  F +TL +G+    +    +QG  L G+  F L+DT
Sbjct: 342 MGAAGEELQRQQAQVEQVLKSEEEQFARTLERGLALLDEELAKLQGDTLDGEIVFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           +GFP DLT  +  ER L +D  GF  AM++ R+R+R A    A  + V+  DA +     
Sbjct: 402 FGFPADLTADVCRERNLKIDEAGFEQAMEQQRQRAREASGFGADYSNVIRIDAAS----- 456

Query: 529 GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDE 588
                  SFK     D  + +KA+Y   E ++ V  G +  +VL  + FY E GGQ+ D 
Sbjct: 457 -------SFKGYDQLDLAATVKALYVAGEAVDEVSAGQDAVVVLDETPFYGESGGQVGDT 509

Query: 589 GFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
           G ++G    F V++ Q YG  + H+G LT  AG+  +G+ +  +VD  RR  I  NH+ T
Sbjct: 510 GLLKGKNAEFSVQDTQKYGQAIGHVGKLT--AGQLRIGDRLEAQVDAARRARIRLNHSAT 567

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+L+ ALR+VLG+HV QKGS+V  + LRFDFSH + + P+ +R++E IVN QI+  L V 
Sbjct: 568 HLLHAALRQVLGEHVGQKGSLVNDKYLRFDFSHFEAMKPQEIRQVEDIVNAQIRRNLPVE 627

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
           ++   L  AK   G  A+FGE Y   VRV+ +G                  S ELCGGTH
Sbjct: 628 TEVMDLDAAKS-KGAMALFGEKYDQRVRVLTMG----------------DFSVELCGGTH 670

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEK 828
            + T +   F + +E G A GIRRI A+T   A     A  S  +++    K   S L +
Sbjct: 671 AARTGDIGLFRIQAESGTAAGIRRIEAITGESALAQVNAQSSQLQDIAQLVKANSSNLNE 730

Query: 829 ------NQVRKAQKKVAE-ENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREA 881
                 + VR  +K++ +  + Q A + A+ ++ A    G    +S +   +D   +R  
Sbjct: 731 KVRGLVDHVRALEKELQQLRDQQAAQESASLSSNAIDVKGAKLLVSELS-NVDPKMLRTM 789

Query: 882 VLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKG 941
           V  +  Q    ++V +T     K  + AGV +  D + +++  E +    Q + G+ G G
Sbjct: 790 VDDLKNQLESAIIVLAT-VAEGKVSLIAGVTK--DLTDRVKAGELIAGLAQQVGGKGG-G 845

Query: 942 KGGLASGQGTDAAQVTPAM 960
           +  +A   G DA  +  A+
Sbjct: 846 RPDMAQAGGNDAEALKGAL 864


>gi|254489976|ref|ZP_05103171.1| alanyl-tRNA synthetase [Methylophaga thiooxidans DMS010]
 gi|224465061|gb|EEF81315.1| alanyl-tRNA synthetase [Methylophaga thiooxydans DMS010]
          Length = 858

 Score =  605 bits (1561), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 377/920 (40%), Positives = 518/920 (56%), Gaps = 80/920 (8%)

Query: 67  FFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRACNTQ 126
           F  FF  K H    SSP+VP NDPTLLF NAGM Q+K  FLG      +  K TRA  TQ
Sbjct: 2   FLDFFASKGHEVVASSPLVPANDPTLLFTNAGMVQFKETFLGQ-----ETRKYTRAVTTQ 56

Query: 127 KCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLPADRL 186
           +C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK EAI++AWE LT+   LP ++L
Sbjct: 57  RCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIQYAWEFLTETLALPPEKL 116

Query: 187 YATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFGCKDNFWEMGDTGPCGPCSEIHY 244
           + T F          D+EA DIWLK +   A R    G KDNFW MGDTGPCGPCSEI Y
Sbjct: 117 WITVF--------EEDDEAADIWLKEIGVSADRFSRIGAKDNFWSMGDTGPCGPCSEIFY 168

Query: 245 DRTGNRDAA----SLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLT 300
           D     D A         D    IEIWN+VF+QF+R +DG+L PLP   VDTG+G ERL 
Sbjct: 169 DH--GEDIAGGPPGTPEEDGDRYIEIWNLVFMQFDRSADGTLTPLPKPSVDTGMGLERLA 226

Query: 301 SILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFA 360
           ++LQ+  +NY+ D+F  + +AIQ  +G             D  + + RV+ADHIR+ SF 
Sbjct: 227 AVLQHVHNNYEIDLFQHLIEAIQALSGTE-----------DSSNFSLRVIADHIRSCSFM 275

Query: 361 IADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQRE 420
           IADG  P NEGR YVLRRI+RRA+R+G + L  ++ FF+ LV  +V  MGD FPELKQ +
Sbjct: 276 IADGVHPSNEGRGYVLRRIIRRAIRHGHK-LGLKEAFFHKLVQPLVNEMGDAFPELKQAQ 334

Query: 421 AHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQLMA 480
           A + + +  EE  F  TL  G+    +A +D+  K + G+  F+L+DTYGFP+DLT  +A
Sbjct: 335 ALVEKALLQEENRFADTLDNGLRILDQAIEDMGDKEIPGETVFLLYDTYGFPIDLTADIA 394

Query: 481 EERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSFKFI 540
            ERGL +DI GF  AM+  R R+RSA ++ AGG           L ++  +A D    F 
Sbjct: 395 RERGLTIDIAGFERAMEAQRTRARSA-SQFAGG-----------LSEQ--IAIDGETAFC 440

Query: 541 WFQDHK--SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFGSF 598
            +   +    I AI    E ++ +  G E  +VL  + FYAE GGQ+ D G I     SF
Sbjct: 441 GYSQTQETGTITAIIADGEHVDQLEAGQEGVLVLDHTPFYAESGGQVGDHGEITSDNASF 500

Query: 599 YVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREV 658
            V + +  G    HIG      G+F VG+ V  ++D   R+  A NH+ TH+L+ ALR V
Sbjct: 501 TVSDTRKQGKAFTHIGRCEH--GQFHVGQSVTAQIDESNRQATALNHSATHLLHAALRNV 558

Query: 659 LGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAK 718
           LGDHV QKGS+V P++LRFDFSH +PV P+ L  IE +VN+QI+    V +K   + EAK
Sbjct: 559 LGDHVMQKGSLVDPQRLRFDFSHFEPVTPDQLHDIERMVNQQIRLNHPVDTKLMAIEEAK 618

Query: 719 CINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAF 778
             +G  A+FGE Y D VRV+++G                  S ELCGGTH+ +T +    
Sbjct: 619 K-SGAMALFGEKYDDEVRVLSMG----------------DFSIELCGGTHVQHTGDIGLL 661

Query: 779 ALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIE-GSLLEKNQVRKAQKK 837
            + +E GIA G+RRI AVT   A    +   S   +V D  K +  ++ +K  +   + +
Sbjct: 662 KITAEAGIASGVRRIEAVTGDKALDYIDTTQSTLNQVSDLLKAKPDNVQDKAALLVQRSR 721

Query: 838 VAEENLQK-AVKVATETAEAAAS-----NGKPFCISRVEVGLDAAAVREAVLKVIEQKGM 891
             E+ L+    K+A+   +  A+     NG     S +E G D  A+REAV ++  + G 
Sbjct: 722 ELEKELESLKAKLASSAGDDLANSVQEINGIKVLASSLE-GADGKALREAVDQLKNKLGT 780

Query: 892 PVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGT 951
             +V  T     K  + AGV +  D + ++   + +      + G+ G G+  +A G G 
Sbjct: 781 AAIVL-TAVKDEKITIIAGVTK--DITDKIRAGDLVGHVASQVGGK-GGGRPDMAQGGGN 836

Query: 952 DAAQVTPAMDLAAEFAAMKL 971
           +   +  A+    ++   KL
Sbjct: 837 EPQNLAAALASVTDWVGSKL 856


>gi|329961902|ref|ZP_08299915.1| alanine--tRNA ligase [Bacteroides fluxus YIT 12057]
 gi|328531125|gb|EGF57975.1| alanine--tRNA ligase [Bacteroides fluxus YIT 12057]
          Length = 873

 Score =  605 bits (1561), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 333/747 (44%), Positives = 438/747 (58%), Gaps = 61/747 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R++F  FFE K H    S+P+V  +DPTL+F NAGMNQ+K I LG        +K 
Sbjct: 4   ANEIRESFKSFFESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGN-----HPAKY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWE L  V 
Sbjct: 59  KRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAWEYLVDVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +L    LYAT F G  + GL  DNEA   W +FLP   +L     DNFWEMGDTGPCGPC
Sbjct: 119 KLDPKDLYATVFEGSPEEGLERDNEAASYWEQFLPKDHILNGNKHDNFWEMGDTGPCGPC 178

Query: 240 SEIHYDRTGNRDAA-----SLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + A      LVN D P  IEIWN+VF+QFNR++DGSL+ LPAK +DTG+
Sbjct: 179 SEIHVDSRSEEEKAKVPGSQLVNKDHPQVIEIWNLVFMQFNRKADGSLEGLPAKVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF PI  AI    G           +  + D+A RVVADHI
Sbjct: 239 GFERLVRTLQGKTSNYDTDVFQPILKAIADMAGTT-------YGNNQQQDIAMRVVADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++F+I DG  P N    YV+RRILRRAVRYG   L  +  F   L+ ++++ MG  +P
Sbjct: 292 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLIENMGGAYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ--GKV-LSGQDAFILWDTYGF 471
           EL  ++  I ++I  EE SF +TL  GI   +K   D +  GK  +SG+DAF L+DT+GF
Sbjct: 352 ELIAQKDLIAKVIKEEEDSFLRTLETGIRLLEKTMADAKAAGKTEISGKDAFTLYDTFGF 411

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E G+  DI+ F+  M + ++R+R+A   + G  I +    T  +   G  
Sbjct: 412 PLDLTELILRENGMTADIKEFDAEMQQQKQRARNAAAVETGDWITLKEGTTEFV---GYD 468

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            T+     + ++  K   + +Y                IVL  + FYAE GGQ+ D G +
Sbjct: 469 YTEYETGILRYRQVKQKNQTLYQ---------------IVLDKTPFYAESGGQVGDTGVL 513

Query: 592 EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHML 651
              F +  V + +      IHI   T+          + C VD D+R   A NH+CTH+L
Sbjct: 514 VNEFETVEVIDTKKENNLPIHI---TKKLPEHLEAPMMAC-VDTDKRAACAANHSCTHLL 569

Query: 652 NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS-K 710
           + ALREVLGDHV+QKGS+V P+ LRFDFSH + V  E +R++E IVN +I+A + +   +
Sbjct: 570 DAALREVLGDHVEQKGSLVTPDSLRFDFSHFQKVTDEEIRQVEHIVNAKIRANIPLKEYR 629

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
              + EAK +  + A+FGE Y D VRV+  G                  S E CGGTH++
Sbjct: 630 NIPIEEAKELGAI-ALFGEKYGDHVRVIQFGS-----------------SIEFCGGTHVA 671

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVT 797
            T       ++SE  +A GIRRI A T
Sbjct: 672 ATGNIGMVKIVSESSVAAGIRRIEAYT 698


>gi|167764982|ref|ZP_02437103.1| hypothetical protein BACSTE_03375 [Bacteroides stercoris ATCC
           43183]
 gi|167697651|gb|EDS14230.1| alanine--tRNA ligase [Bacteroides stercoris ATCC 43183]
          Length = 873

 Score =  605 bits (1560), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 348/828 (42%), Positives = 472/828 (57%), Gaps = 70/828 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++RD+F  FFE K H    S+P+V  +DPTL+F NAGMNQ+K I LG        +K 
Sbjct: 4   ANEIRDSFKSFFESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGN-----HPAKY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWE L  V 
Sbjct: 59  KRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAWEYLVDVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +L    LYAT F G  + GL  DNEA   W +FLP   +L     DNFWEMGDTGPCGPC
Sbjct: 119 KLDPKDLYATVFEGSPEEGLERDNEAASYWEQFLPKDHILNGNKHDNFWEMGDTGPCGPC 178

Query: 240 SEIHYDRTGNRDAA-----SLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + A      LVN D P  IEIWN+VF+QFNR++DGSL+ LPAK +DTG+
Sbjct: 179 SEIHVDSRSEEEKAKVPGSQLVNKDHPQVIEIWNLVFMQFNRKADGSLEGLPAKVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF PI  AI   TGA    GK      ++ D+A RV+ADHI
Sbjct: 239 GFERLVRTLQGKTSNYDTDVFQPILKAIGDMTGAT--YGK-----NEQQDIAMRVIADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++F+I DG  P N    YV+RRILRRAVRYG   L  +  F   L+ ++++ MG  +P
Sbjct: 292 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLIENMGGAYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ--GKV-LSGQDAFILWDTYGF 471
           EL  ++  I ++I  EE SF +TL  GI    K   D +  GK  +SG+DAF L+DT+GF
Sbjct: 352 ELNAQKELIAKVIKEEEDSFLRTLETGIRLLDKTMADAKAAGKTEISGKDAFTLYDTFGF 411

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E G+  DI+ F+  M + ++R+R+A   + G  I +    T  +   G  
Sbjct: 412 PLDLTELILRENGMTADIKEFDAEMQQQKQRARNAAAVETGDWITLQEGTTEFV---GYD 468

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            T+     + ++  K   + ++                IVL  + FYAE GGQ+ D G +
Sbjct: 469 YTEYETSILRYRQIKQKNQTLFQ---------------IVLDKTPFYAESGGQVGDTGVL 513

Query: 592 EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHML 651
              F +  V + +      IHI   T+          + C VD D+R   A NH+ TH+L
Sbjct: 514 VNEFETIEVIDTKKENNLPIHI---TKKLPEHLEAPFMAC-VDTDKRAACAANHSATHLL 569

Query: 652 NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS-K 710
           + ALREVLGDHV+QKGS+V P+ LRFDFSH + V  E +R++E IVN +I+A + +   +
Sbjct: 570 DAALREVLGDHVEQKGSLVTPDSLRFDFSHFQKVTDEEIRQVEHIVNAKIRANIPLKEYR 629

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
              + EAK + G  A+FGE Y D VRV+  G                  S E CGGTH++
Sbjct: 630 NIPIEEAKEL-GAIALFGEKYGDRVRVIQFGS-----------------SIEFCGGTHVA 671

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV----DDASKIEGSL- 825
            T       ++SE  +A G+RRI A T     +  +A     +++    ++A  + G++ 
Sbjct: 672 ATGNIGMMKIVSESSVAAGVRRIEAYTGARVEEMLDAFQDTMRDLKALFNNAPDLSGTIR 731

Query: 826 --LEKNQVRKAQKK--VAEENLQKAVKVATETAEAAASNGKPFCISRV 869
             +E+N   K Q +  + E+  Q   K+     E   +    FC + +
Sbjct: 732 KYIEENAGLKKQVEDFMKEKEAQLKEKLLQNIQEVNGTKVIKFCAAMI 779


>gi|421504121|ref|ZP_15951065.1| alanyl-tRNA ligase [Pseudomonas mendocina DLHK]
 gi|400345222|gb|EJO93588.1| alanyl-tRNA ligase [Pseudomonas mendocina DLHK]
          Length = 874

 Score =  605 bits (1560), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 381/940 (40%), Positives = 528/940 (56%), Gaps = 96/940 (10%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F  FFE+K H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLSFFEEKGHTRVASSSLIPANDPTLLFTNAGMNQFKDCFLGL-----EKRAY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           TRA  +QKC+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT  K
Sbjct: 58  TRATTSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWEFLTSDK 117

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFW 228
              LP ++L+ T +        A D+EA +IW K +  PA R++  G         DNFW
Sbjct: 118 WLNLPKEKLWVTVY--------ATDDEAYEIWNKEIGVPAERMIRIGDNKGAPYASDNFW 169

Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
            MGDTGPCGPC+EI +D   +           D    IEIWN VF+QFNR +DG L PLP
Sbjct: 170 AMGDTGPCGPCTEIFFDHGEHIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLP 229

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
           A  VDTG+G ER++++LQ+  SNY+ D+F  +  A  +A G             ++   +
Sbjct: 230 APSVDTGMGLERISAVLQHVNSNYEIDLFQNLLAASAKAIGC-----------VNEGQAS 278

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            +VVADHIR+ SF IADG  P NEGR YVLRRI+RRA R+G++ L A+  FF  +V  +V
Sbjct: 279 LKVVADHIRSCSFLIADGVTPSNEGRGYVLRRIVRRACRHGNK-LGAKGSFFYQIVAALV 337

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
             MG+ FPELKQ++AHI  ++  EE  F KTL +G++  ++    +QG V+ G   F L+
Sbjct: 338 AEMGEAFPELKQQQAHIERVLKTEEEQFAKTLEQGLKILEQDLAGLQGSVIPGDIVFKLY 397

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFP+DLT  +A ER L VD EGF   M+  RER+RSA       A  MD +A     
Sbjct: 398 DTYGFPVDLTADIARERELSVDEEGFEREMEAQRERARSAS------AFGMDYNA----- 446

Query: 527 KRGVLATDDSFKFIWFQ--DHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
              ++  D   +F+ ++       I A++     ++S+  G E  +VL  + FYAE GGQ
Sbjct: 447 ---LVKVDADTRFLGYEGTSGSGKIIALFKAGAAVDSLAEGEEGVVVLDQTPFYAESGGQ 503

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           I D G++E     F VR+    GG  +H G + +G    SVG  V  + +   R+  A N
Sbjct: 504 IGDCGYLESAGVRFDVRDTTKAGGAFLHHGVVVKGG--LSVGTSVKAEAEASVRQATALN 561

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ ALR+VLGDHV QKGS+V  ++LRFDFSH + + PE L+++E IVN +I+  
Sbjct: 562 HSATHLLHAALRQVLGDHVQQKGSLVDSQRLRFDFSHFEAIKPEQLKQLEDIVNAEIRKN 621

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
            +V ++E  +  AK   G  A+FGE Y D VRV+++G                  S ELC
Sbjct: 622 SEVETEETDIETAKA-KGAMALFGEKYGDQVRVLSMGG---------------DFSVELC 665

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGS 824
           GGTH+S T +   F + SE G+A G+RRI AVT   A     AA    KE   AS ++GS
Sbjct: 666 GGTHVSRTGDIGLFKITSEGGVAAGVRRIEAVTGAAALAWLNAAEEQLKEA--ASLVKGS 723

Query: 825 LLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEV-----------GL 873
              ++ V      + E N Q   ++    A+AA++ G     S V+V           GL
Sbjct: 724 ---RDNVLDKLSALIERNRQLEKELEQLKAKAASAAGNDLAGSAVDVKGTKVLAARLDGL 780

Query: 874 DAAAVREAVLKVIEQKGMPVMVFST--DETTNKAVVCAGVPEKSDQSKQLEVSEWLTAAL 931
           D  A+   V ++  + G  V++     DE   K V+ AGV +  D + +L+  + L    
Sbjct: 781 DGKALLALVDQLKNKLGSGVILLGGVFDE---KVVLVAGVTQ--DLTAKLKAGD-LMRQA 834

Query: 932 QPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
               G  G G+  +A G G DA ++  A+ LAA F    L
Sbjct: 835 AAAVGGKGGGRPDMAQGGGVDAGKLDEALALAATFVEQGL 874


>gi|27364961|ref|NP_760489.1| alanyl-tRNA synthetase [Vibrio vulnificus CMCP6]
 gi|29611879|sp|Q8DC49.1|SYA_VIBVU RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|27361107|gb|AAO10016.1| alanyl-tRNA synthetase [Vibrio vulnificus CMCP6]
          Length = 860

 Score =  605 bits (1560), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 365/914 (39%), Positives = 518/914 (56%), Gaps = 86/914 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR+ F KFFE K H    SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRNAFLKFFESKGHQIVDSSSLVPHNDPTLLFTNAGMNQFKDCFLGA-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT+  +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIAFAWEFLTETLKL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           P DRL  T +          D+EA DIW +   +PA R++  G K        DNFW MG
Sbjct: 122 PKDRLLVTVY--------ETDDEAFDIWNQKVGVPADRIIRIGDKKGGKQYESDNFWTMG 173

Query: 232 DTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
           DTGPCGPC+EI YD      G R        D    IEIWN VF+QFNR +DG+++PLP 
Sbjct: 174 DTGPCGPCTEIFYDHGEHIWGGRPGTP--EEDGDRFIEIWNNVFMQFNRHADGTMEPLPK 231

Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
             VDTG+G ER+++I+Q   SNY+ DVF  +  A  +  G    S           + + 
Sbjct: 232 PSVDTGMGIERISAIMQGVHSNYEIDVFQKLIKATAEIVGCEDLS-----------NQSL 280

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RV+ADHIR+ SF IADG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF+ LV ++ +
Sbjct: 281 RVIADHIRSCSFLIADGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGVFFHKLVGVLAE 339

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWD 467
            MG    ELK+++A + +++  EE +FG+TL +G+    +A   ++GK L G+  F L+D
Sbjct: 340 AMGSAADELKKQQAVVEKVLRIEEENFGRTLERGMVILNEALDALEGKELDGETVFKLYD 399

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
           TYGFP DLT  +A ER   +D  GF  AM+E R+R+R A      G    D +A     K
Sbjct: 400 TYGFPADLTNDVAREREFTIDEAGFEKAMEEQRQRAREA------GQFGTDYNA-----K 448

Query: 528 RGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFD 587
             V A  +   +   Q+   V+ A++   E   ++  G++  ++L  + FYAE GGQ  D
Sbjct: 449 IKVDAQSEFCGYTSTQERSDVV-ALFVEGEETATLSAGDKAIVILQETPFYAESGGQCGD 507

Query: 588 EGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTC 647
            G ++   G F V + Q  G  + H G L EG    + G++V   VD +RR  I+ NH+ 
Sbjct: 508 SGVLKTESGLFQVEDTQKLGNAIAHHGVLVEGV--LAKGDQVTAIVDAERRAAISLNHSA 565

Query: 648 THMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDV 707
           TH+L+ ALR+VLG+HV QKGS+V  E LRFDFSH + V    L+ +E +VN QI+    +
Sbjct: 566 THLLHAALRQVLGEHVAQKGSLVKAENLRFDFSHLEAVTAAELKEVERLVNAQIRRNHAI 625

Query: 708 FSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGT 767
            +    +  AK   G  A+FGE Y D VRV+++G                  S ELCGG 
Sbjct: 626 ETNIMDIESAKQ-KGAMALFGEKYDDEVRVLSMG----------------DFSTELCGGI 668

Query: 768 HLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEA-ACSLEKEVDDASKIEGSLL 826
           H SNT +   F + SE GIA GIRRI AVT   A +A +A A   E+++ DA+    SL 
Sbjct: 669 HASNTGDIGLFKITSEGGIAAGIRRIEAVTGEAALEAIDAQARKFEEKLQDAANKAKSL- 727

Query: 827 EKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVI 886
            + ++++ + K+A +     +    E A      G    +++++ G D  A+R  V ++ 
Sbjct: 728 -EKEIQQLKDKLASQASANLIDQVKEIA------GVKVLVAKLD-GADNKALRGMVDELK 779

Query: 887 EQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLA 946
            Q G  +++   +   +K  + AGV +  D + +++  E +    Q + G+ G G+  +A
Sbjct: 780 NQMGSGIIMLG-NVADDKVGLIAGVTQ--DLTSKVKAGELVNMVAQQVGGK-GGGRPDMA 835

Query: 947 SGQGTDAAQVTPAM 960
              GTD++ +  A+
Sbjct: 836 QAGGTDSSALPSAL 849


>gi|224538063|ref|ZP_03678602.1| hypothetical protein BACCELL_02953 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|423221358|ref|ZP_17207828.1| alanyl-tRNA synthetase [Bacteroides cellulosilyticus CL02T12C19]
 gi|224520311|gb|EEF89416.1| hypothetical protein BACCELL_02953 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|392646457|gb|EIY40171.1| alanyl-tRNA synthetase [Bacteroides cellulosilyticus CL02T12C19]
          Length = 872

 Score =  605 bits (1560), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 332/747 (44%), Positives = 443/747 (59%), Gaps = 61/747 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R++F  FFE K H    S+P+V  +DPTL+F NAGMNQ+K I LG        +K 
Sbjct: 4   ANEIRNSFKSFFESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGN-----HPAKY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWE L  V 
Sbjct: 59  KRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAINWAWEYLVDVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           ++    LYAT F G  + GL  DNEA   W +FLP   +L     DNFWEMGDTGPCGPC
Sbjct: 119 KIDPKNLYATVFEGSPEEGLERDNEAASYWEQFLPKDHILNGNKHDNFWEMGDTGPCGPC 178

Query: 240 SEIHYDRTGNRDAA-----SLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + A      LVN D P  IEIWN+VF+QFNR++DGSL+ LPAK +DTG+
Sbjct: 179 SEIHIDSRPEEEKAQIPGSQLVNKDHPQVIEIWNLVFMQFNRKADGSLEGLPAKVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ+K SNYDTDVF PI  AI   TG      K G D  +K D+A RV+ADHI
Sbjct: 239 GFERLVRTLQDKTSNYDTDVFQPILKAIGNMTGK-----KYGED--EKSDIAMRVIADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++F+I DG  P N    YV+RRILRRAVRYG   L  +  F   L+ ++++ MG+ +P
Sbjct: 292 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQRQAFMYKLLPVLIENMGEAYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ--GKV-LSGQDAFILWDTYGF 471
           EL+ ++  I ++I  EE SF +TL  GI    K   D +  GK  +SG+DAF L+DT+GF
Sbjct: 352 ELEAQKELISKVIKEEEDSFLRTLETGIRLLDKTMADAKAAGKTEISGKDAFTLYDTFGF 411

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E G+  DI+ F+  M + ++R+R+A   + G  I +    T  +   G  
Sbjct: 412 PLDLTELILRENGMTADIKEFDAEMQQQKQRARNAAAIETGDWITLKEGTTEFV---GYD 468

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            T+     + ++  K   + +Y                IVL  + FYAE GGQ+ D G +
Sbjct: 469 YTEYETSILRYRQVKQKNQTLYQ---------------IVLDYTPFYAESGGQVGDTGVL 513

Query: 592 EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHML 651
              F +  V + +      IHI   T+          + C VD D+R   A NH+ TH+L
Sbjct: 514 VSEFETIEVIDTKKENNLPIHI---TKKLPAHPEAPMMAC-VDTDKRAACAANHSATHLL 569

Query: 652 NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS-K 710
           + ALREVLG+HV+QKGS+V P+ LRFDFSH + V  E +R++E +VN +I+A + +   +
Sbjct: 570 DSALREVLGEHVEQKGSLVTPDSLRFDFSHFQKVTDEEIRQVEHLVNAKIRANIPLKEYR 629

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
              + +AK + G  A+FGE Y D VRV+  G                  S E CGGTH++
Sbjct: 630 NIPIEDAKEL-GAIALFGEKYGDHVRVIQFGS-----------------SVEFCGGTHVA 671

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVT 797
            T       ++SE  +A G+RRI A T
Sbjct: 672 ATGNIGMIKIVSESSVAAGVRRIEAYT 698


>gi|325298627|ref|YP_004258544.1| alanyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
 gi|324318180|gb|ADY36071.1| alanyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
          Length = 872

 Score =  605 bits (1560), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 348/810 (42%), Positives = 464/810 (57%), Gaps = 69/810 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++RD+F KFFE K H    S+P+V  +DPTL+F NAGMNQ+K I LG        +K 
Sbjct: 4   ANEIRDSFVKFFESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGN-----HPAKY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK E I WAWE L  V 
Sbjct: 59  KRVTDSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEVIGWAWEYLVDVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           ++    LYAT F G  + GL  DNEA   W ++LP   ++     DNFWEMGDTGPCGPC
Sbjct: 119 KIDPSILYATVFEGSPEEGLERDNEAAGYWEQYLPKDHIINGNKHDNFWEMGDTGPCGPC 178

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + A      LVN D+P  IEIWN+VF+Q+NR++DGSL+PLPAK +DTG+
Sbjct: 179 SEIHIDLRSEEEKAKVPGRELVNKDNPLVIEIWNLVFMQYNRKADGSLEPLPAKVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF PI   I   TG        G D   KVD+A RVVADHI
Sbjct: 239 GFERLCMALQGKKSNYDTDVFQPIIKVIGDLTGL-----TYGKD--PKVDVAMRVVADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++F+I DG  P N    YV+RRILRRAVRY    L  +  F   LV ++++ MG  +P
Sbjct: 292 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYAYTFLGQKQAFMFKLVPVLIENMGQAYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQD---VQGKVLSGQDAFILWDTYGF 471
           ELK ++  I ++I  EE +F +TL  GI    K   D    Q   +SG DAF L+DT+GF
Sbjct: 352 ELKAQQPLIEKVIKEEEEAFLRTLETGIRLLDKVMNDAKAAQKTEISGVDAFTLYDTFGF 411

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E G+ V+ E FN  M + ++R+R+A   + G  ++++   T   H  G  
Sbjct: 412 PLDLTELILRENGMTVNEEEFNIEMQKQKQRARNAAAIETGDWVILEEGET---HFVGYD 468

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            T+   + + ++  K   + +Y                IVL+ + FYAE GGQ+ D G +
Sbjct: 469 YTEYETRILRYRQIKQKNQTLYQ---------------IVLSETPFYAESGGQVGDTGVL 513

Query: 592 EGLFGSFYVRNVQIYGGFVIHIG-SLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHM 650
              F +  + + +      IHI   L E      +   ++  VD D+R   A NH+CTH+
Sbjct: 514 VSEFETIEIIDTKKENNLPIHIAKQLPE-----HLDAPMMACVDTDKRAACAANHSCTHL 568

Query: 651 LNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSK 710
           L+ ALR+VLG HV+QKGS+V PE LRFDFSH + V PE LR +E +VN +I+  + +   
Sbjct: 569 LDEALRQVLGTHVEQKGSLVTPESLRFDFSHFQKVTPEQLREVEHLVNAKIRENVPLTEY 628

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
                E     G  A+FGE Y D VRVV  G                  S E CGGTH+S
Sbjct: 629 RNLPIEKAKELGAIALFGEKYGDEVRVVQFGS-----------------SIEFCGGTHVS 671

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKNQ 830
            T +     +LSE  +A G+RRI A+T     K  E    L+  ++D   ++        
Sbjct: 672 ATGKIGMVKILSESSVAAGVRRIEAITGA---KVEEMMDILQDTIND---LKALFNNAPD 725

Query: 831 VRKAQKKVAEEN--LQKAVKVATETAEAAA 858
           +R A  K  +EN  L+K ++   +  EA+A
Sbjct: 726 LRAAISKYVDENAGLKKQMEEFMKEREASA 755


>gi|422016607|ref|ZP_16363189.1| alanyl-tRNA ligase [Providencia burhodogranariea DSM 19968]
 gi|414092642|gb|EKT54316.1| alanyl-tRNA ligase [Providencia burhodogranariea DSM 19968]
          Length = 875

 Score =  605 bits (1560), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 365/934 (39%), Positives = 529/934 (56%), Gaps = 89/934 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSK--L 119
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG       L K   
Sbjct: 7   EIRQAFLDFFHTKGHQVVSSSSLVPNNDPTLLFTNAGMNQFKDVFLG-------LDKRAY 59

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           +RA   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI +AWELLT  +
Sbjct: 60  SRATTAQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAINFAWELLTGKE 119

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFW 228
            + LP ++L+ T +        A D+EA +IW K +  PA R++  G         DNFW
Sbjct: 120 WFNLPKEKLWVTVY--------ATDDEAYEIWNKNVGVPAERIIRIGDNKGAAYASDNFW 171

Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
           +MGDTGPCGPCSEI YD   +           D    IEIWNIVF+QFNR+SDG+++PLP
Sbjct: 172 QMGDTGPCGPCSEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQSDGTMEPLP 231

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
              VDTG+G ER+ ++LQ+  SNYD D+F  +  A   ATG+   S K           +
Sbjct: 232 KPSVDTGMGLERIAAVLQHVNSNYDIDIFRDLIAAAANATGSSDLSNK-----------S 280

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            RV+ADHIR+ +F I+DG  P NEGR YVLRRI+RRAVR+G  +L A+D FF  LV  +V
Sbjct: 281 LRVIADHIRSCAFLISDGVIPSNEGRGYVLRRIIRRAVRHGY-MLGAKDTFFYKLVAPLV 339

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
           KVMG+   ELK++++ + + + AEE  F +TL +G++   +    ++G  L G+ AF L+
Sbjct: 340 KVMGNAADELKRQQSKVEKALKAEEEQFARTLERGLQLLDEELASLKGDTLEGETAFRLY 399

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFP+DLT  +  ER + VD EGF  AM++ R R+R +    A      D ++   + 
Sbjct: 400 DTYGFPIDLTADVCRERNIKVDEEGFERAMEDQRRRARESSGFGA------DYNSLIKIE 453

Query: 527 KRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           K         F    + +  + I AIY   + ++S+  G+E  ++L  ++FYAE GGQ+ 
Sbjct: 454 KHS------EFSGYTYNEQLATITAIYKDGQPVDSLNAGDEGLVILDKTAFYAESGGQVG 507

Query: 587 DEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
           D G +    GSF V + Q YG  + HIG +  G+    +   +  K+D  RR  I  NH+
Sbjct: 508 DTGILHNDSGSFTVTDTQKYGQAIGHIGKVESGS--LVINHRIDAKIDVKRRDAIRLNHS 565

Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD 706
            TH+L+ ALR+VLG+HV QKGS+V  + LRFDFSH + + P  LR +E IVN QI+    
Sbjct: 566 ATHLLHAALRQVLGEHVAQKGSLVNDKYLRFDFSHFEAMTPSQLREVEDIVNTQIRKNTP 625

Query: 707 VFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGG 766
           + ++   L  AK   G  A+FGE Y + VRV+++G                  S ELCGG
Sbjct: 626 IETELMDLEGAKA-KGAMALFGEKYEERVRVLSMG----------------DFSIELCGG 668

Query: 767 THLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEG--- 823
           TH S T +   F +LSE G A GIRRI A T   A +        E+    A  ++G   
Sbjct: 669 THASRTGDIGLFRILSESGTAAGIRRIEATTGENAIENIHNQS--EQLTAIAHLLKGDMN 726

Query: 824 SLLEK-----NQVRKAQKKVAE-ENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAA 877
           SL+EK     ++ R+ +K++ + ++ Q + + A+ +++A    G    +S++    +   
Sbjct: 727 SLVEKVKSALDKSRQLEKEILQLKDQQASQESASLSSQAKDIKGAKLLVSQLS-NTEPKL 785

Query: 878 VREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGR 937
           +R  V  +  Q    ++V ST  + +K  V  GV   +D + +++  + ++   Q + G+
Sbjct: 786 LRTMVDDLKNQLKSAIIVLST-TSGDKVSVIVGVT--NDLTAKIKAGDLISYVAQQVGGK 842

Query: 938 CGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
            G G+  +A   GTD   +  AM    E+   +L
Sbjct: 843 GG-GRPDMAQAGGTDVHALPAAMASVEEWVNSRL 875


>gi|345871858|ref|ZP_08823800.1| alanyl-tRNA synthetase [Thiorhodococcus drewsii AZ1]
 gi|343919914|gb|EGV30655.1| alanyl-tRNA synthetase [Thiorhodococcus drewsii AZ1]
          Length = 867

 Score =  605 bits (1560), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 364/914 (39%), Positives = 518/914 (56%), Gaps = 75/914 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R +F  +F  + H    SSP+VP NDPTLLF NAGM Q+K +FLG      +    
Sbjct: 4   SAELRASFLDYFAQRQHAEVASSPLVPANDPTLLFTNAGMVQFKELFLGR-----ERRAY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            RA ++Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK EAI +AWE LT+V 
Sbjct: 59  NRAVSSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIGFAWEYLTQVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFGCKDNFWEMGDTGPCG 237
            LP +RL+ T F          D+EA DIWLK +   A R    G KDNFW MGDTGPCG
Sbjct: 119 SLPPERLWVTVF--------EDDDEAADIWLKEIGVDAKRFSRCGAKDNFWSMGDTGPCG 170

Query: 238 PCSEIHYDR--TGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           PCSEI YD             + D    +EIWN+VF+QFNR+++G + PLP   VDTG+G
Sbjct: 171 PCSEIFYDHGPEIPGGPPGSPDEDGDRYVEIWNLVFMQFNRDAEGKMTPLPRPSVDTGMG 230

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
            ERL ++ Q   SNYD D+F  + +A  + TG            AD+ D + RV+ADHIR
Sbjct: 231 LERLAAVKQGVHSNYDIDLFRHLIEAAAEVTGC-----------ADRADKSLRVIADHIR 279

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPE 415
           + +F I DG  P NEGR YVLRRI+RRA+R+G   L   D FF+ LV  +V  MGD +PE
Sbjct: 280 STAFLIIDGVTPSNEGRGYVLRRIMRRAIRHGYR-LGCSDPFFHRLVAPLVVEMGDAYPE 338

Query: 416 LKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDL 475
           LK  +AH+  +I  EE  F +TL  G+    +A   + G  + G+  F L+DTYGFP DL
Sbjct: 339 LKSAQAHVERLIKLEEERFAETLDHGMRILDEAIAGLSGDRIPGETVFKLYDTYGFPTDL 398

Query: 476 TQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDD 535
           T  +A ERGL +D+EGF +AM   +ER+R+A   Q G        AT  L  + V    D
Sbjct: 399 TADIARERGLTLDMEGFESAMGAQKERARAA--SQFG--------ATQTLEIQ-VQGETD 447

Query: 536 SFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLF 595
              +   ++  +V+ A+Y      +++  G E  +VL  + FY E GGQ+ D G++    
Sbjct: 448 FCGYERLREEATVV-ALYRDGVSCDALESGEEGLVVLDITPFYGESGGQVGDHGWLSTET 506

Query: 596 GSFYVRNVQIYGGFV-IHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFA 654
             F V + Q  GG V IH+G + EG+   +VG+ V  +VD +RR   A NH+ TH+L+ A
Sbjct: 507 ARFEVVDTQKKGGGVMIHVGRVLEGS--LTVGDRVDARVDAERRLETALNHSATHLLHAA 564

Query: 655 LREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATL 714
           LR+VLGDHV QKGS+V PE+LRFDFSH +PV  E L  IE +VN +++A   V ++  +L
Sbjct: 565 LRQVLGDHVQQKGSLVGPERLRFDFSHFEPVSREQLLEIERLVNREVRANHLVETRIMSL 624

Query: 715 AEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTRE 774
            +AK  +G  A+FGE Y D VRV+ +G                  S ELCGGTH+    +
Sbjct: 625 DDAKA-SGAMALFGEKYADQVRVLRMG----------------DFSTELCGGTHVKAVGD 667

Query: 775 AEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKN----Q 830
                +++E GIA G+RRI A+T   A    EA    E+ +  A  ++G   + +    Q
Sbjct: 668 IGLVKIVNETGIAAGVRRIEAITGAAALDWVEA--DEERLLRLAGLLKGGREDVDERVVQ 725

Query: 831 VRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEV----GLDAAAVREAVLKVI 886
           + +  +++ +E  Q   K+A+   +  A+  +     RV      G D  ++R  + ++ 
Sbjct: 726 LVERARRLEKELEQLKSKLASSAGQDLAAQARDVEGVRVLAARLDGADPKSLRTTMDQLK 785

Query: 887 EQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLA 946
           ++ G  V+V +T E   K  + AGV +  D + + +  + +      + G+ G G+  +A
Sbjct: 786 DKLGSAVIVLAT-EADGKVSLVAGVTK--DLTDRFKAGDLIREIATQVGGK-GGGRPDMA 841

Query: 947 SGQGTDAAQVTPAM 960
              G D A +  A+
Sbjct: 842 QAGGNDPAGIPGAL 855


>gi|444426191|ref|ZP_21221615.1| alanyl-tRNA ligase [Vibrio campbellii CAIM 519 = NBRC 15631]
 gi|444240604|gb|ELU52142.1| alanyl-tRNA ligase [Vibrio campbellii CAIM 519 = NBRC 15631]
          Length = 865

 Score =  605 bits (1559), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 373/922 (40%), Positives = 515/922 (55%), Gaps = 97/922 (10%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR+ F KFFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRNAFLKFFESKGHQIVESSSLVPHNDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI + WE LT+  +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIAFVWEFLTETLKL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           PADRL  T +          D+EA DIW K   +PA R++  G K        DNFW+MG
Sbjct: 122 PADRLLVTVY--------ETDDEAFDIWNKKVGVPADRIIRIGDKKGGKPFESDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
           DTGPCGPC+EI YD      G R        D    IEIWN VF+QFNR++DG+++PLP 
Sbjct: 174 DTGPCGPCTEIFYDHGEHIWGGRPGTP--EEDGDRFIEIWNNVFMQFNRQADGTMEPLPK 231

Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
             VDTG+G ER+++I+Q   SNY+ DVF  +  A  +  G    S           + + 
Sbjct: 232 PSVDTGMGIERISAIMQGVHSNYEIDVFQALIKAAAEVIGYEDLS-----------NQSL 280

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RV+ADHIR+ SF I DG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF+ LV ++ +
Sbjct: 281 RVIADHIRSCSFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGAFFHKLVGVLAE 339

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKA-----AQDVQGKVLSGQDA 462
           +MG    ELK+++A + +++  EE +FG+TL +G+    +A     +Q   GKVL G+  
Sbjct: 340 IMGTAGEELKRQQAVVEKVLRIEEENFGRTLERGMAILNEALDNISSQGTDGKVLDGETV 399

Query: 463 FILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADAT 522
           F L+DTYGFP DLT  +A ER   +D EGF  AM+E R+R+R A N           D  
Sbjct: 400 FKLYDTYGFPADLTNDVAREREFAIDEEGFEKAMEEQRQRAREAGN--------FGTDYN 451

Query: 523 AALHKRGVLATDDSFKFIWFQDHK--SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAE 580
           AA+        D   +F  +   K  S + A++     +ES+  G++  IVL  + FYAE
Sbjct: 452 AAIK------VDTQTEFCGYTGTKGSSSVAAMFVEGNEVESLSAGDKAIIVLGETPFYAE 505

Query: 581 QGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
            GGQ  D G I    G F V + Q  G  + H G + EG    + G+EV   VD +RR  
Sbjct: 506 SGGQCGDAGEIRTESGVFRVEDTQKLGNAIAHHGVMAEGV--LAKGDEVATIVDAERRAA 563

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
           I+ NH+ TH+L+ ALR++LG+HV QKGS+V  + LRFDFSH + V    L+ +E +VN Q
Sbjct: 564 ISLNHSATHLLHAALRQLLGEHVTQKGSLVKADGLRFDFSHLEAVTAAELKEVERLVNAQ 623

Query: 701 IKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           I+    + +    +  AK   G  A+FGE Y D VRV+++G                  S
Sbjct: 624 IRRNHVIETNVMDIESAKK-KGAMALFGEKYDDEVRVLSMG----------------DFS 666

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK 820
            ELCGG H S+T +   F + SE GIA GIRRI AVT   A  A EA          A+K
Sbjct: 667 TELCGGIHASSTGDIGLFKITSEGGIAAGIRRIEAVTGEGALDAIEA---------QAAK 717

Query: 821 IEGSLLEKNQVRKAQKKVAEENLQK--AVKVATETAEAAASNGKPFCISRVEVGLDAAAV 878
            E  L+E +Q  K+ +K  ++   K  A + A    +    NG    I+ +E G D   +
Sbjct: 718 YEEKLVESSQKAKSLEKEIQKLKDKMAAAESANIMGKVQDINGTKVLIAALE-GADNKNL 776

Query: 879 REAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRC 938
           R  V  +  Q G  V++ + +   +K  + AGV +  D   +++  + +    + + G+ 
Sbjct: 777 RTMVDDIKNQVGSGVILLA-NVNDDKIGLIAGVTK--DLIGKVKAGDLVKMVAEQVGGKG 833

Query: 939 GKGKGGLASGQGTDAAQVTPAM 960
           G G+  +A   GTD A +  A+
Sbjct: 834 G-GRPDMAQAGGTDVAALPAAI 854


>gi|146307925|ref|YP_001188390.1| alanyl-tRNA synthetase [Pseudomonas mendocina ymp]
 gi|145576126|gb|ABP85658.1| alanyl-tRNA synthetase [Pseudomonas mendocina ymp]
          Length = 892

 Score =  605 bits (1559), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 378/945 (40%), Positives = 531/945 (56%), Gaps = 92/945 (9%)

Query: 53  PQVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADP 112
           P      + ++R+ F  FFE+K H    SS ++P NDPTLLF NAGMNQ+K  FLG    
Sbjct: 14  PWKTPMKSAEIREAFLSFFEEKGHTRVASSSLIPANDPTLLFTNAGMNQFKDCFLGL--- 70

Query: 113 NTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAW 172
             +    TRA  +QKC+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AW
Sbjct: 71  --EKRAYTRATTSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAW 128

Query: 173 ELLT--KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG------ 222
           E LT  K   LP ++L+ T +        A D+EA +IW K +  PA R++  G      
Sbjct: 129 EFLTSDKWLNLPKEKLWVTVY--------ATDDEAYEIWNKEIGVPAERMIRIGDNKGAP 180

Query: 223 -CKDNFWEMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESD 279
              DNFW MGDTGPCGPC+EI +D   +           D    IEIWN VF+QFNR +D
Sbjct: 181 YASDNFWAMGDTGPCGPCTEIFFDHGEHIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTAD 240

Query: 280 GSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADD 339
           G L PLPA  VDTG+G ER++++LQ+  SNY+ D+F  +  A  +A G            
Sbjct: 241 GVLHPLPAPSVDTGMGLERISAVLQHVNSNYEIDLFQNLLAASAKAIGC----------- 289

Query: 340 ADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFN 399
           A++   + +VVADHIR+ SF IADG  P NEGR YVLRRI+RRA R+G++ L A+  FF 
Sbjct: 290 ANEGQASLKVVADHIRSCSFLIADGVTPSNEGRGYVLRRIVRRACRHGNK-LGAKGSFFY 348

Query: 400 GLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSG 459
            +V  +V  MG+ FPELKQ++AHI  ++  EE  F KTL +G++  ++    +QG V+ G
Sbjct: 349 QIVAALVAEMGEAFPELKQQQAHIERVLKTEEEQFAKTLEQGLKILEQDLAGLQGSVIPG 408

Query: 460 QDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDA 519
              F L+DTYGFP+DLT  +A ER L VD EGF   M+  RER+RSA       A  MD 
Sbjct: 409 DIVFKLYDTYGFPVDLTADIARERELSVDEEGFEREMEAQRERARSAS------AFGMDY 462

Query: 520 DATAALHKRGVLATDDSFKFIWFQ--DHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSF 577
           +A        ++  D   +F+ ++       I A++     ++S+  G E  +VL  + F
Sbjct: 463 NA--------LVKVDADTRFLGYEGTSGSGKIIALFKAGAAVDSLAEGEEGVVVLDQTPF 514

Query: 578 YAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDR 637
           YAE GGQI D G++E     F VR+    GG  +H G + +G    SVG  V  + +   
Sbjct: 515 YAESGGQIGDCGYLESAGMRFDVRDTTKAGGAFLHHGVVAKGG--LSVGTSVKAEAEASV 572

Query: 638 RKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIV 697
           R+  A NH+ TH+L+ ALR+VLGDHV QKGS+V  ++LRFDFSH + + PE L+++E IV
Sbjct: 573 RQATALNHSATHLLHAALRQVLGDHVQQKGSLVDSQRLRFDFSHFEAIKPEQLKQLEDIV 632

Query: 698 NEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWL 757
           N +I+   +V ++E  +  AK   G  A+FGE Y D VRV+++G                
Sbjct: 633 NAEIRKNSEVETEETDIETAKA-KGAMALFGEKYGDQVRVLSMGG--------------- 676

Query: 758 SISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAF--------EAAC 809
             S ELCGGTH+S T +   F + SE G+A G+RRI AVT   A            EAA 
Sbjct: 677 DFSVELCGGTHVSRTGDIGLFKITSEGGVAAGVRRIEAVTGAAALAWLNAAEEQLKEAAS 736

Query: 810 SLEKEVDDASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAAS-NGKPFCISR 868
            ++   D+      +L+E+N  R+ +K++ +   + A     + A +A    G     +R
Sbjct: 737 LVKGSRDNVLDKLSALIERN--RQLEKELEQLKAKAASAAGNDLAGSAVDLKGTKVLAAR 794

Query: 869 VEVGLDAAAVREAVLKVIEQKGMPVMVFST--DETTNKAVVCAGVPEKSDQSKQLEVSEW 926
           ++ GLD  A+   V ++  + G  V++     DE   K V+ AGV +  D + +L+  + 
Sbjct: 795 LD-GLDGKALLALVDQLKNKLGSGVILLGGVFDE---KVVLVAGVTQ--DLTAKLKAGD- 847

Query: 927 LTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           L        G  G G+  +A G G DA ++  A+ LAA F    L
Sbjct: 848 LMRQAAAAVGGKGGGRPDMAQGGGVDAGKLDEALALAATFVEQGL 892


>gi|213963758|ref|ZP_03392008.1| alanyl-tRNA synthetase [Capnocytophaga sputigena Capno]
 gi|213953638|gb|EEB64970.1| alanyl-tRNA synthetase [Capnocytophaga sputigena Capno]
          Length = 877

 Score =  605 bits (1559), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 355/886 (40%), Positives = 502/886 (56%), Gaps = 78/886 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F KFFE K H    S+P+V  NDPTL+F NAGMNQ+K  FLG A P     K 
Sbjct: 3   SQEIRNLFLKFFESKGHTIVPSAPMVIKNDPTLMFTNAGMNQFKEFFLGHAKP-----KH 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  +TQKC+R  GKHNDL++VG+DTYHHT FEMLGNWSFGDYFK EAI WAWELLT++Y
Sbjct: 58  KRVADTQKCLRVSGKHNDLEEVGRDTYHHTMFEMLGNWSFGDYFKREAISWAWELLTEIY 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           ++P + LY T F G E+ G+  D EA DIW + +    +L    KDNFWEMGD GPCGPC
Sbjct: 118 KIPKENLYVTVFEGSEEDGVPFDQEAFDIWKERIAEDHILLGNKKDNFWEMGDQGPCGPC 177

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           +EIH D   + + A      LVNND P  IEIWN VF++FNR++DGSL+ LP+++VDTG+
Sbjct: 178 TEIHVDIRSDEEKAKVAGRDLVNNDHPQVIEIWNNVFMEFNRKADGSLEKLPSRNVDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL  +LQNK SNYDTDVF P+   +++ T +   S      + ++V++A RV++DHI
Sbjct: 238 GFERLCMVLQNKQSNYDTDVFTPLIHKVEEITKSHYNSNGRVTPEQEQVNIAIRVISDHI 297

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R ++FAIADG  P N G  YV+RRILRRA+RYG   L  ++ F   LV  +   MG  FP
Sbjct: 298 RAVAFAIADGQLPSNNGAGYVIRRILRRAIRYGFTFLNQKEPFIYKLVETLAAQMGATFP 357

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLD 474
           EL++++  I  +I  EEASF +TL +G+       Q+   K LSG  AF L+DTYGFP D
Sbjct: 358 ELEKQQFLIMSVIKEEEASFLRTLEQGLLMLDVMIQNSPDKQLSGGKAFELYDTYGFPKD 417

Query: 475 LTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATD 534
           LT L+  E+GL +D EGF   + + +ERSR+A   +    +              VL  D
Sbjct: 418 LTALILSEKGLTMDEEGFEVQLQKQKERSRAAAQVKTDDWV--------------VLRDD 463

Query: 535 DSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGL 594
           D  +FI +   ++V++ +      +ES   G    +V  ++ FY E GGQ+ D+G ++  
Sbjct: 464 DEEEFIGYDTLEAVVRLVKYRR--VESQKDGTHFQLVFNTTPFYPEGGGQVGDKGTLQAA 521

Query: 595 FGSF-YVRNVQIYGGFVIHIGSL--TEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHML 651
            G   Y+ + +     +IHI     TE    F     ++       R++   NH+ TH+L
Sbjct: 522 NGELIYILDTKKENNLIIHIAEHLPTELNDPFKAEVHLVA------REMAEANHSATHLL 575

Query: 652 NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKE 711
           + ALREVLG HV+QKGS V PE LRFDFSH   +  + L+ +E +VN++I  ++ +    
Sbjct: 576 HQALREVLGTHVEQKGSRVAPEALRFDFSHFAKLTSDELKEVERLVNKRIFEKIPLQEHR 635

Query: 712 ATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSN 771
               +    +G  A+FGE Y D VR++  G                  S ELCGGTH+ N
Sbjct: 636 NIPIQQAVESGAMALFGEKYGDRVRMIQFGD-----------------SKELCGGTHVKN 678

Query: 772 TREAEAFALLSEEGIAKGIRRITAVTTGLAYKAF-------EAACSLEKEVDDASKIEGS 824
           T +   F ++SE  +A GIRRI A+T G A + F       E      K   D  K    
Sbjct: 679 TGDIWFFKIISEGAVAAGIRRIEAITRGGAMQYFIEQEQLVERIKETVKNTQDPVKAITH 738

Query: 825 LLEKN--------QVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
           L E+N        Q++K Q K  + NL+         AE    N     I +V+   + A
Sbjct: 739 LQEENAALHRELEQLKKEQAKQLKANLK---------AEFTEINAIQCLIKQVDA--EVA 787

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLE 922
            +++   ++  +     + F++     KA++   + ++  Q+K L+
Sbjct: 788 TLKDLAFELGNEVKDAFVFFASAHEEGKALLLCYINKELAQAKGLD 833


>gi|145220398|ref|YP_001131107.1| alanyl-tRNA synthetase [Chlorobium phaeovibrioides DSM 265]
 gi|145206562|gb|ABP37605.1| alanyl-tRNA synthetase [Chlorobium phaeovibrioides DSM 265]
          Length = 893

 Score =  604 bits (1558), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 376/872 (43%), Positives = 486/872 (55%), Gaps = 115/872 (13%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           ++ +R +F  FF  K+H   +S+PV+P +DPTLLF NAGMNQ+K +FL            
Sbjct: 11  SSDIRQSFLDFFVGKSHAIVRSAPVIPADDPTLLFTNAGMNQFKDVFLAKG-----TRSY 65

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA +TQKCIRA GKHNDL+DVG+DTYHHTFFEMLGNWSFGDY+K EAI WAWELLT V+
Sbjct: 66  SRAADTQKCIRASGKHNDLEDVGRDTYHHTFFEMLGNWSFGDYYKEEAITWAWELLTVVW 125

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCKDNFWEMGDTGPCG 237
           +LP +RLYAT +          D+E+  IW +   +    +L FG KDNFWEMG+TGPCG
Sbjct: 126 KLPEERLYATVY--------HDDDESFRIWEEKTSIRPDHILRFGDKDNFWEMGETGPCG 177

Query: 238 PCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFE 297
           PCSEIH D T +    +LVN DDP  IE+WN+VFIQ++R+ DG L+PLP +HVDTG+GFE
Sbjct: 178 PCSEIHIDLTPDGSGRALVNADDPQAIELWNLVFIQYDRQVDGRLEPLPQRHVDTGMGFE 237

Query: 298 RLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTL 357
           R+ +++Q K SNYDTDVF P+FD I + TG      + GA   D  D+A RV+ADH RTL
Sbjct: 238 RVCAVMQGKSSNYDTDVFRPLFDTITELTGV-----EYGASMHDPQDIAMRVIADHARTL 292

Query: 358 SFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELK 417
           SFA++DG+ P NEGR YVLRRILRRA+RY  + L       + LV  V   MGDVFPEL+
Sbjct: 293 SFALSDGAMPSNEGRGYVLRRILRRALRYAKD-LGYNKPILHRLVATVADSMGDVFPELR 351

Query: 418 QREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK---VLSGQDAFILWDTYGFPLD 474
            R+  +  I+ AEE SF  TL +GIE F      V+G+    L G+DAF L+DTYGFP D
Sbjct: 352 DRQDAVARIVKAEEESFLVTLDRGIEIFNGLVGKVRGEGSSTLEGEDAFKLYDTYGFPFD 411

Query: 475 LTQLMAEERGLLVDIEGFNNAMDEARERSRS-AQNKQAGGAIVMDADATAALHKRGVLAT 533
           LT+LMA   GL VD EGF   M E + R+R   + KQ GGA                   
Sbjct: 412 LTRLMASSAGLQVDGEGFERCMQEQKTRARQDRREKQRGGA------------------- 452

Query: 534 DDSFKFIWFQDHKSVIKAIYTGSEFIESVV----PGNEVGIVLASSSFYAEQGGQIFDEG 589
            +   + WF D  +     Y G E   S++        + +VL  + FYAE GGQ  D G
Sbjct: 453 -EEGSWEWFSDLHATEFTGYDGLEADASIIGISRSKKNLLLVLDRTPFYAESGGQTGDRG 511

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHI---------------GSLTEGAGRFSVGEEVICKVD 634
           +IE       V + Q  G   +H+                 +  G GR      V   VD
Sbjct: 512 WIETGEYRLEVTDTQKDGDSFVHVVTRAFDNVRDSEADPADIAVGPGR------VHASVD 565

Query: 635 YDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIE 694
              R+    NHT TH+L+  LR  LG HV QKGS+V PE+LRFDFSH   + PE +  +E
Sbjct: 566 RKLRQATERNHTATHLLHAVLRHTLGAHVQQKGSLVNPERLRFDFSHFSKLTPEEIDAVE 625

Query: 695 SIVNEQIKAELDVFSKEATLAEAKC------INGLRAVFGEVYPDPVRVVAIGRKVEDLL 748
           S VN+ I+        EATL  A          G  A FG+ Y D VRVV I        
Sbjct: 626 SAVNDCIR------QAEATLKHADVPYDDAITKGALAFFGDKYADLVRVVEIP------- 672

Query: 749 ADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLA------- 801
                     IS ELCGGTH+ N  +   F ++ E  +A G+RRI A+T   A       
Sbjct: 673 ---------GISVELCGGTHVDNVGQIGLFKIVGESSVAAGVRRIEALTGRAAEELMWNE 723

Query: 802 YKAFEAACSLEK---EVDDASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAA 858
           Y+       L K   E   A K+   L E+   R  +K++AE  L+  V +     +A+A
Sbjct: 724 YRELHDVRQLLKMKAEEPPAEKVAAILEER---RALEKQLAE--LKAEVLLVKLQGDASA 778

Query: 859 SNGKPFC--ISRVEVGLDAAAVREAVLKVIEQ 888
                 C  ++RV  G DA  +R A   + +Q
Sbjct: 779 LEDVCGCRIVARVVDGADAEGLRYAAQMLRQQ 810


>gi|205830258|sp|A4SGJ6.2|SYA_PROVI RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
          Length = 885

 Score =  604 bits (1558), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 376/872 (43%), Positives = 486/872 (55%), Gaps = 115/872 (13%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           ++ +R +F  FF  K+H   +S+PV+P +DPTLLF NAGMNQ+K +FL            
Sbjct: 3   SSDIRQSFLDFFVGKSHAIVRSAPVIPADDPTLLFTNAGMNQFKDVFLAKG-----TRSY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA +TQKCIRA GKHNDL+DVG+DTYHHTFFEMLGNWSFGDY+K EAI WAWELLT V+
Sbjct: 58  SRAADTQKCIRASGKHNDLEDVGRDTYHHTFFEMLGNWSFGDYYKEEAITWAWELLTVVW 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCKDNFWEMGDTGPCG 237
           +LP +RLYAT +          D+E+  IW +   +    +L FG KDNFWEMG+TGPCG
Sbjct: 118 KLPEERLYATVY--------HDDDESFRIWEEKTSIRPDHILRFGDKDNFWEMGETGPCG 169

Query: 238 PCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFE 297
           PCSEIH D T +    +LVN DDP  IE+WN+VFIQ++R+ DG L+PLP +HVDTG+GFE
Sbjct: 170 PCSEIHIDLTPDGSGRALVNADDPQAIELWNLVFIQYDRQVDGRLEPLPQRHVDTGMGFE 229

Query: 298 RLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTL 357
           R+ +++Q K SNYDTDVF P+FD I + TG      + GA   D  D+A RV+ADH RTL
Sbjct: 230 RVCAVMQGKSSNYDTDVFRPLFDTITELTGV-----EYGASMHDPQDIAMRVIADHARTL 284

Query: 358 SFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELK 417
           SFA++DG+ P NEGR YVLRRILRRA+RY  + L       + LV  V   MGDVFPEL+
Sbjct: 285 SFALSDGAMPSNEGRGYVLRRILRRALRYAKD-LGYNKPILHRLVATVADSMGDVFPELR 343

Query: 418 QREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK---VLSGQDAFILWDTYGFPLD 474
            R+  +  I+ AEE SF  TL +GIE F      V+G+    L G+DAF L+DTYGFP D
Sbjct: 344 DRQDAVARIVKAEEESFLVTLDRGIEIFNGLVGKVRGEGSSTLEGEDAFKLYDTYGFPFD 403

Query: 475 LTQLMAEERGLLVDIEGFNNAMDEARERSRS-AQNKQAGGAIVMDADATAALHKRGVLAT 533
           LT+LMA   GL VD EGF   M E + R+R   + KQ GGA                   
Sbjct: 404 LTRLMASSAGLQVDGEGFERCMQEQKTRARQDRREKQRGGA------------------- 444

Query: 534 DDSFKFIWFQDHKSVIKAIYTGSEFIESVV----PGNEVGIVLASSSFYAEQGGQIFDEG 589
            +   + WF D  +     Y G E   S++        + +VL  + FYAE GGQ  D G
Sbjct: 445 -EEGSWEWFSDLHATEFTGYDGLEADASIIGISRSKKNLLLVLDRTPFYAESGGQTGDRG 503

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHI---------------GSLTEGAGRFSVGEEVICKVD 634
           +IE       V + Q  G   +H+                 +  G GR      V   VD
Sbjct: 504 WIETGEYRLEVTDTQKDGDSFVHVVTRAFDNVRDSEADPADIAVGPGR------VHASVD 557

Query: 635 YDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIE 694
              R+    NHT TH+L+  LR  LG HV QKGS+V PE+LRFDFSH   + PE +  +E
Sbjct: 558 RKLRQATERNHTATHLLHAVLRHTLGAHVQQKGSLVNPERLRFDFSHFSKLTPEEIDAVE 617

Query: 695 SIVNEQIKAELDVFSKEATLAEAKC------INGLRAVFGEVYPDPVRVVAIGRKVEDLL 748
           S VN+ I+        EATL  A          G  A FG+ Y D VRVV I        
Sbjct: 618 SAVNDCIR------QAEATLKHADVPYDDAITKGALAFFGDKYADLVRVVEIP------- 664

Query: 749 ADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLA------- 801
                     IS ELCGGTH+ N  +   F ++ E  +A G+RRI A+T   A       
Sbjct: 665 ---------GISVELCGGTHVDNVGQIGLFKIVGESSVAAGVRRIEALTGRAAEELMWNE 715

Query: 802 YKAFEAACSLEK---EVDDASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAA 858
           Y+       L K   E   A K+   L E+   R  +K++AE  L+  V +     +A+A
Sbjct: 716 YRELHDVRQLLKMKAEEPPAEKVAAILEER---RALEKQLAE--LKAEVLLVKLQGDASA 770

Query: 859 SNGKPFC--ISRVEVGLDAAAVREAVLKVIEQ 888
                 C  ++RV  G DA  +R A   + +Q
Sbjct: 771 LEDVCGCRIVARVVDGADAEGLRYAAQMLRQQ 802


>gi|432482004|ref|ZP_19723958.1| alanyl-tRNA synthetase [Escherichia coli KTE210]
 gi|431005675|gb|ELD20689.1| alanyl-tRNA synthetase [Escherichia coli KTE210]
          Length = 876

 Score =  604 bits (1557), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 362/916 (39%), Positives = 515/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  K +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + ++++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   SF V + Q YG  + HIG L   AG   VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A G+RRI AVT   A     A      EV         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAITTVHADSDRLSEVAHLLKGDSNN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            A K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T  T  K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VTEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|343506705|ref|ZP_08744175.1| alanyl-tRNA synthetase [Vibrio ichthyoenteri ATCC 700023]
 gi|342801808|gb|EGU37264.1| alanyl-tRNA synthetase [Vibrio ichthyoenteri ATCC 700023]
          Length = 860

 Score =  604 bits (1557), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 367/908 (40%), Positives = 518/908 (57%), Gaps = 90/908 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR+ F KFFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRNAFLKFFETKGHQIVESSSLVPHNDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT+  +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIAFAWEFLTETLQL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           P DRL  T +          D+EA DIW +   +PA R++  G K        DNFW+MG
Sbjct: 122 PKDRLLVTIY--------ETDDEAFDIWNQKVGIPADRIIRIGDKKGGKPFESDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
           DTGPCGPC+EI YD      G R        D    IEIWN VF+QFNR++DG+++PLP 
Sbjct: 174 DTGPCGPCTEIFYDHGDHIWGGRPGTP--EEDGDRFIEIWNNVFMQFNRQADGTMEPLPK 231

Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
             VDTG+G ER+++I+Q   SNY+ DVF  +  A  +  G    S           + + 
Sbjct: 232 PSVDTGMGIERISAIMQGVHSNYEIDVFQALIKATAELIGCEDLS-----------NQSL 280

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RV+ADHIR+ SF I DG  P NEGR YVLRRI+RRAVR+G+++  AQ  FF+ LV ++  
Sbjct: 281 RVIADHIRSCSFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNKI-GAQGVFFHKLVGVLAG 339

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWD 467
           +MG    ELK+++A + +++  EE +FG+TL +G+    +A  ++ GKVL G+  F L+D
Sbjct: 340 IMGTAGEELKRQQALVEKVLRIEEENFGRTLERGMTILNEALDNLDGKVLDGETVFKLYD 399

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
           TYGFP DLT  +A ER   +D EGF  AM+E R+R+R A      G    D +A      
Sbjct: 400 TYGFPADLTNDVAREREFAIDEEGFEKAMEEQRQRAREA------GQFGTDYNA------ 447

Query: 528 RGVLATDDSFKFIWF--QDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
             V+ TD    F  +   + +SVI A++     +ES+  G++  IVL ++ FYAE GGQ 
Sbjct: 448 --VIKTDVETDFSGYTGTEGESVIAALFVEGNEVESLSAGDKAIIVLEATPFYAESGGQS 505

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D G ++   G F V + Q  G  + H G L EG   F+ G++    VD  RR  I  NH
Sbjct: 506 GDAGVLKTDSGLFTVEDTQKLGNAIAHHGVLAEGV--FAKGDKAHAIVDAARRTAITLNH 563

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+L+ ALR+VLG+HV QKGS+V  + LRFDFSH + V    L+ +E IVN Q++   
Sbjct: 564 SATHLLHAALRKVLGEHVTQKGSLVKADNLRFDFSHLEGVTAAELKEVERIVNAQVRRNH 623

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
           D+ +    +  AK   G  A+FGE Y D VRV+++G                  S ELCG
Sbjct: 624 DIETNVMDIESAKE-KGAMALFGEKYDDEVRVLSMG----------------EFSTELCG 666

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACS-LEKEVDDASKIEGS 824
           G H  NT +   F + SE GIA GIRRI AVT   A    EA  +  E+++ +A+    S
Sbjct: 667 GIHAENTGDIGLFKITSEGGIAAGIRRIEAVTGEAALDVIEAQTAKYEEKLAEAANKAKS 726

Query: 825 LLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLK 884
           L  + ++++ + K+A    Q +  +  +  + A   G    I++++ G D  A+R  V +
Sbjct: 727 L--EKEIQQLKDKLAS---QASASLTDQVKDIA---GVKVLIAQLD-GADNKALRGMVDE 777

Query: 885 VIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGG 944
           +  Q G  +++   +   +K  + AGV +  D   +++  E +    Q + G+ G G+  
Sbjct: 778 LKNQMGSGIIMLG-NVADDKVGLIAGVTK--DLIGKVKAGELVNMVAQQVGGKGG-GRPD 833

Query: 945 LASGQGTD 952
           +A   GTD
Sbjct: 834 MAQAGGTD 841


>gi|422780386|ref|ZP_16833171.1| alanyl-tRNA synthetase [Escherichia coli TW10509]
 gi|323978695|gb|EGB73777.1| alanyl-tRNA synthetase [Escherichia coli TW10509]
          Length = 876

 Score =  604 bits (1557), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 361/916 (39%), Positives = 516/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  K +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + ++++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G+  SF V + Q YG  + HIG L   AG   VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGVNFSFAVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A G+RRI AVT   A     A      EV         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATVHADSDRLSEVAHLLKGDSNN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            A K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S++  G++  
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSKLS-GVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|372222183|ref|ZP_09500604.1| alanyl-tRNA synthetase [Mesoflavibacter zeaxanthinifaciens S86]
          Length = 871

 Score =  604 bits (1557), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 363/881 (41%), Positives = 501/881 (56%), Gaps = 77/881 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + KVR+ F  FF++K H    S+P+V  NDPTLLF NAGMNQ+K  FLG   P       
Sbjct: 3   SQKVREQFLNFFKNKEHKIVPSAPMVMKNDPTLLFTNAGMNQFKEYFLGNTKPT-----F 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            RA +TQKC+R  GKHNDL++VGKDTYHHT FEMLGNWSFGDYFK EAI WAWELLT+VY
Sbjct: 58  KRASDTQKCLRVSGKHNDLEEVGKDTYHHTMFEMLGNWSFGDYFKKEAIAWAWELLTEVY 117

Query: 180 RLPADRLYATYF-GGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGP 238
           ++  D LY T F G +++  LA D EA D W   +P  R+L    KDNFWEMGD GPCGP
Sbjct: 118 KIDKDCLYVTVFEGSEDEDQLAMDKEAYDFWKAIVPEERILMGNKKDNFWEMGDQGPCGP 177

Query: 239 CSEIHYD-RTGNRDA----ASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTG 293
           CSEIH D R+    A    A LVN D P  +EIWN+VFIQ+NR+++G L+ LP KH+DTG
Sbjct: 178 CSEIHVDIRSAEEKAKTPGAELVNMDHPQVVEIWNLVFIQYNRKANGLLENLPEKHIDTG 237

Query: 294 LGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADH 353
           +GFERL  +LQ   SNYDTDVF P+   I+  T       K G ++  + D+A RV+ADH
Sbjct: 238 MGFERLCMVLQGVQSNYDTDVFTPLIREIEAIT-----ESKYGKNE--ETDIAIRVIADH 290

Query: 354 IRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVF 413
           +R ++FAIADG  P N G  YV+RRILRRA+RYG   L  ++ F   LVN +   MG+ F
Sbjct: 291 VRAVAFAIADGQLPSNTGAGYVIRRILRRAIRYGFTFLDTKEPFIYRLVNTLASQMGEAF 350

Query: 414 PELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPL 473
           PELK ++  I  +I  EE SF  TL +G+       +  + K + G  AF L+DT+GFP+
Sbjct: 351 PELKNQQQLIENVIKEEENSFLATLEQGLVLLDSVMKSAKDKKVDGDKAFELYDTFGFPI 410

Query: 474 DLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLAT 533
           DLT L+ EE+G  +D EGF  A+   + RSR+A     G   V++ D             
Sbjct: 411 DLTALILEEKGFALDTEGFEQALQAQKARSRAASEISKGDWTVLEQDTEQ---------- 460

Query: 534 DDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEG 593
               +FI +   ++ +K +      + +   G+   +V   + FYAE GGQ+ D+G++E 
Sbjct: 461 ----EFIGYDTLEAQVKVVKYRK--VTTKKEGDRYQLVFNLTPFYAEGGGQVGDKGYLEA 514

Query: 594 LFGSF-YVRNVQIYGGFVIHIGS--LTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHM 650
             G   Y+ + +     ++H       + AG F         VD  +R+  A NHT TH+
Sbjct: 515 ANGDVTYILDTKKENNEIVHFAENLPADLAGTFK------AVVDKKQRQRTASNHTATHL 568

Query: 651 LNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSK 710
           L+ ALRE+LG HV+QKGS V  + LRFDFSH   V PE L  +E  VN +I  ++ +   
Sbjct: 569 LHQALREILGSHVEQKGSAVHSKHLRFDFSHFAKVTPEELEAVEQFVNARIAGQIPLEEN 628

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
                +     G  A+FGE Y D VR +  G                  S ELCGGTH+ 
Sbjct: 629 RNVPVKQALEAGAMALFGEKYGDTVRTIKFGN-----------------SIELCGGTHVQ 671

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAF----EAACS----LEKEVDDASKIE 822
           NT E   F + SE  +A GIRRI A+T+  A KAF    +A  S    L  +  D  K  
Sbjct: 672 NTSEIWHFKITSEGAVAAGIRRIEAITSD-AVKAFYQENDATLSDIKGLLNKAKDPVKAV 730

Query: 823 GSLLEKN-QVRKAQKKVAEENLQKAVKVATETA-EAAASNGKPFCISRVEVGLDAAAVRE 880
             L ++N Q+RK  +++ +E   KA  + +E   E    NG  F + +V+  LDAA +++
Sbjct: 731 ADLQDENAQLRKQVEQLLKE---KAKGLKSELLNEVTNVNGVDFLVKQVD--LDAAGIKD 785

Query: 881 AVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQL 921
            + ++   K    ++ + D+   KA++   + ++  ++K+L
Sbjct: 786 LLFEMGANKDNLFVLLAADK-DGKALLSCYISKELAKTKEL 825


>gi|429727139|ref|ZP_19261918.1| alanine--tRNA ligase [Prevotella sp. oral taxon 473 str. F0040]
 gi|429144843|gb|EKX87950.1| alanine--tRNA ligase [Prevotella sp. oral taxon 473 str. F0040]
          Length = 875

 Score =  603 bits (1556), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 360/931 (38%), Positives = 519/931 (55%), Gaps = 80/931 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R+++ +FFE+  H+   S+P+V  +DPTL+F NAGMNQ+K I LG  +P     K 
Sbjct: 4   ANEIRESYKRFFEEHGHLIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGHTEP-----KC 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK +AI +A++ L  V 
Sbjct: 59  RRMTDSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKEDAITFAYKFLVDVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           ++    LY T F GD++AGL  D+EA  IW ++ P   ++     DNFWEMGDTGPCGPC
Sbjct: 119 KIDPKNLYVTVFEGDKEAGLERDDEAAAIWERYFPKDHIINGNKHDNFWEMGDTGPCGPC 178

Query: 240 SEIHYDRTGNRD-----AASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     +      ASLVN D+P  IEIWN+VF+Q+NR++DGSL+ LP K +DTG+
Sbjct: 179 SEIHIDGRSEEEKAKVSGASLVNQDNPEVIEIWNLVFMQYNRKADGSLEGLPHKVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL  +LQ K SNYDTD+F PI   I + +G             + +D+A RV+ADH+
Sbjct: 239 GFERLVRVLQGKNSNYDTDIFQPIIRKIAEFSG-------FAYGKEETIDVAMRVIADHL 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R ++F+IADG  P N    YV+RRILRRAVRY    L  ++ F   LV  +V+ MG  +P
Sbjct: 292 RAIAFSIADGQLPSNAKAGYVIRRILRRAVRYAYTFLNQRETFICRLVPTLVQEMGGAYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFK---KAAQDVQGKVLSGQDAFILWDTYGF 471
           EL  ++  I ++I  EE SF +TL  GI + +   +A +    KV+ G+DAF L+DTYGF
Sbjct: 352 ELPAQQELITKVIREEEESFLRTLATGIHRLETIIEATKAAGNKVVDGKDAFTLFDTYGF 411

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLTQL+  E GL VD  GF+  M + +ER+R+A   + G  +V+ A+     H  G  
Sbjct: 412 PLDLTQLICSEAGLSVDEAGFDAEMQQQKERARNAAATETGDWVVL-AEGDTTFH--GWD 468

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            T+   + + ++  +   +  +                +VL ++ FYAE GGQ+ D G +
Sbjct: 469 YTEYGCRILKYRQVQQKKQTYFE---------------LVLDNTPFYAEMGGQVGDTGVL 513

Query: 592 EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHML 651
                +  + + +      IH   LT+   +    E + C VD DRR  I  NHT TH+L
Sbjct: 514 INEDETVEIFDTKRENNLPIH---LTKALPKNPEAEFMAC-VDVDRRHKIEANHTATHLL 569

Query: 652 NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS-K 710
           + ALRE+LG HV+QKGS+     LRFDFSH + V PE LR+IE ++N +I+  +     +
Sbjct: 570 DQALREILGTHVEQKGSLNNDRSLRFDFSHFQKVTPEELRQIERVINARIRENIPFQDHR 629

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
           +  + EAK +  L A+FGE Y D VRVV  G                  S E CGGTH+S
Sbjct: 630 DMPIEEAKNMGAL-ALFGEKYGDRVRVVQFGD-----------------SVEFCGGTHVS 671

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKNQ 830
            T +   F ++SE  +A GIRRI A+T     +A E +  L++++   S +         
Sbjct: 672 ATGKIGLFRIVSESSVAAGIRRIEAITG----EAAEESMYLQQDI--LSSVSAFFNNAKD 725

Query: 831 VRKAQKKVAEEN--LQKAVKVAT---------ETAEAAAS-NGKPFCISRVEVGLDAAAV 878
           V+ A +K  +EN  L+K V+ A             EAA   NG       + + ++A AV
Sbjct: 726 VKAAVQKAIDENADLKKQVEAAVRERVGQLKGRLIEAAKEINGVKVIAQVLPMDVEAGAV 785

Query: 879 REAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRC 938
           ++   +V  Q      +    +  +K ++   V +    S+QL     +  A + ++G  
Sbjct: 786 KDLAFQVANQLPDNTFLVLGSKHDDKPLLTVMVSKDLIASRQLHAGNLVKEAARLIQG-G 844

Query: 939 GKGKGGLASGQGTDAAQVTPAMDLAAEFAAM 969
           G G    A+  G + A +  A+    E A  
Sbjct: 845 GGGAPHFATAGGKNTAGLDEAVAKVLELAGF 875


>gi|197336333|ref|YP_002155293.1| alanyl-tRNA synthetase [Vibrio fischeri MJ11]
 gi|197317823|gb|ACH67270.1| alanyl-tRNA synthetase [Vibrio fischeri MJ11]
          Length = 859

 Score =  603 bits (1556), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 366/913 (40%), Positives = 521/913 (57%), Gaps = 85/913 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG+   N      TR
Sbjct: 7   EIRRAFLAFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGSEKRN-----YTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI++AWE LT+   L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKQDAIKYAWEFLTERLEL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFWEMGD 232
           PADRL  T +          D+EA +IW K +  PA R++  G         DNFW+MGD
Sbjct: 122 PADRLLVTVY--------ETDDEAFEIWNKEMGIPADRIVRIGDNKGAPYASDNFWQMGD 173

Query: 233 TGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           TGPCGPC+EI YD      G R        D    IEIWN VF+QFNR +DG+++PLP  
Sbjct: 174 TGPCGPCTEIFYDHGEHIWGGRPGTP--EEDGDRFIEIWNNVFMQFNRHADGTMEPLPKP 231

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ +I+Q   SNY+ D+F  +   I++A         +G DD    + + R
Sbjct: 232 SVDTGMGIERIAAIMQGVHSNYEIDIFQTL---IKEAAKV------IGYDDLS--NQSLR 280

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           VVADHIR+ S+ I DG  P NEGR YVLRRI+RRAVR+G++ L A+  +F  LV  + ++
Sbjct: 281 VVADHIRSCSYLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAKGSYFYKLVGPLAEI 339

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    ELK+++A + +++  EE +FG+TL +G+    +A  +++G VL G+  F L+DT
Sbjct: 340 MGTAGEELKKQQALVEKVLKIEEENFGRTLERGMALLNEALDNLEGTVLDGETVFKLYDT 399

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP DLT  +A ER L +D +GF  AM+E R+R+R A      G    D +A   +   
Sbjct: 400 YGFPADLTNDVARERDLTIDEDGFEKAMEEQRQRAREA------GQFGTDYNAVIKVESE 453

Query: 529 GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDE 588
            V    DS       + K+ + A++   E ++++  G+E  ++L  + FYAE GGQ  D 
Sbjct: 454 TVFHGYDS------TEAKASVIALFREGEEVDALSAGDEAILILDQTPFYAESGGQCGDA 507

Query: 589 GFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
           G I    G F V +    G  + H G L EG    S  +  + +VD  RR  I  NH+ T
Sbjct: 508 GIITVETGKFVVTDTHKIGNAIGHHGKLVEGV--LSKADHAMAQVDETRRAAIILNHSAT 565

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+L+ ALR+VLG+HV QKGS+V  E LRFDFSH + V  E LR++E IVN+QI+    + 
Sbjct: 566 HLLHAALRQVLGEHVTQKGSLVKAENLRFDFSHLEAVKAEELRQVERIVNQQIRLNHTIE 625

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
           +    +  AK   G  A+FGE Y D VRV+++G                  S ELCGG H
Sbjct: 626 TDLMDIDAAKE-KGAMALFGEKYDDEVRVLSMG----------------EFSTELCGGIH 668

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAAC-SLEKEVDDASKIEGSLLE 827
            S+T +   F + SE GIA GIRRI AVT   A  A EA   + +K++++A+  +   LE
Sbjct: 669 ASSTGDIGLFKITSEGGIAAGIRRIEAVTGEAALDAIEAQQKAADKKLNEAAS-KAKQLE 727

Query: 828 KNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIE 887
           K ++++ + K+A +     +    E A      G    +++++ G D  A+R  V ++  
Sbjct: 728 K-EIQQLKDKLASQESASLINKVQEIA------GTKVLVAQLD-GADNKALRGMVDELKN 779

Query: 888 QKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLAS 947
           Q G  +++   + +  K  + AGV +  D   Q++  E +    Q + G+ G G+  +A 
Sbjct: 780 QIGSGIIMLG-NVSEGKVGLIAGVTK--DLIGQVKAGELVNMVAQQVGGKGG-GRPDMAQ 835

Query: 948 GQGTDAAQVTPAM 960
             GTDA  +  A+
Sbjct: 836 AGGTDAEALPNAL 848


>gi|229496595|ref|ZP_04390309.1| alanyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
 gi|229316492|gb|EEN82411.1| alanyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
          Length = 873

 Score =  603 bits (1556), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 339/798 (42%), Positives = 464/798 (58%), Gaps = 71/798 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R  F  FF +K H    S+P+V   DPTL+F NAGMNQ+K I LG  +     +K 
Sbjct: 3   ANEIRAAFVAFFAEKQHHIVPSAPMVVKGDPTLMFTNAGMNQFKDIILGNVE-----AKY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  + QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWE L +  
Sbjct: 58  PRIADAQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKEEAISWAWEFLHERL 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
            +PADRLYAT F G E  G   DNEA   W +FLP  R+L    KDNFWEMG+TGPCGPC
Sbjct: 118 GIPADRLYATIFEGAESDGSERDNEAASYWGRFLPQERILDGNKKDNFWEMGETGPCGPC 177

Query: 240 SEIHYDRTGNRD-----AASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D   + +        LVN D P  +EIWN+VF+Q+NR +DGSL  LP K +DTG+
Sbjct: 178 SEIHIDLRSDEERMQQSGRELVNRDHPQVVEIWNLVFMQYNRMADGSLSLLPHKVIDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   +Q K SNYDTDVF P+  A+ Q +G  PY  +      +  D+A RVVADH+
Sbjct: 238 GFERLCMAMQGKRSNYDTDVFQPLIGAVAQLSGI-PYGKE------ESSDVAMRVVADHV 290

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++FAI DG  P N    YV+RRILRRAVRYG   L  ++ F   L+  +++ MG  +P
Sbjct: 291 RTIAFAITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGRREAFMYALLPTLIESMGGAYP 350

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK-VLSGQDAFILWDTYGFPL 473
           EL  +   I++++  EE SF +TL  GI+   K  +++  K  LSG DAF+L+DT+GFPL
Sbjct: 351 ELIAQRELIQKVMREEEESFLRTLEAGIKLLDKKIEELGNKGQLSGHDAFVLYDTFGFPL 410

Query: 474 DLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLAT 533
           DLT+L+  E G+ +D +GF+  M E + R+RSA   +    + +    T  +   G   T
Sbjct: 411 DLTELILREHGMTLDQKGFDREMAEQKARARSAAQLETDDWVTLAEGETLFV---GYDQT 467

Query: 534 DDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI-- 591
           +     + ++  K   K  Y                +VL+++ FYAE GGQ+ D G +  
Sbjct: 468 EADCSILRYRHVKQKNKDFYQ---------------VVLSATPFYAEMGGQVGDSGILVD 512

Query: 592 -EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHM 650
            EG+   + + + +      +H+            G+    ++D +RR++   NHT TH+
Sbjct: 513 EEGM--RYAIVDTKRENNLPVHLMPKLPN----DPGQTFRAEIDQERRRMAEANHTATHL 566

Query: 651 LNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS- 709
           L+ ALR VLG+HV+QKGS V PE LRFDFSH   + PE +R++E +V + ++A+      
Sbjct: 567 LHQALRMVLGEHVEQKGSFVSPEVLRFDFSHYNKLTPEEIRQVEELVTQAVRADYPREEH 626

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
           +   +AEA+ + G  A+FGE Y + VRV+  G                  S ELCGGTH+
Sbjct: 627 RNIPIAEARAM-GAMALFGEKYGEEVRVMKYG-----------------TSIELCGGTHV 668

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKN 829
            +T    AF ++SE  IA G+RRI AVT      A  A   L K+ D   +I+  L    
Sbjct: 669 PSTGMIGAFRIVSESSIAAGVRRIEAVT------ATNAEAFLYKQEDTLKEIKALLNNTP 722

Query: 830 QVRKA-QKKVAEENLQKA 846
            V KA QK ++EE+  K+
Sbjct: 723 DVVKALQKLLSEESALKS 740


>gi|34540951|ref|NP_905430.1| alanyl-tRNA synthetase [Porphyromonas gingivalis W83]
 gi|419971241|ref|ZP_14486700.1| alanine--tRNA ligase [Porphyromonas gingivalis W50]
 gi|41018164|sp|Q7MV54.1|SYA_PORGI RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|34397266|gb|AAQ66329.1| alanyl-tRNA synthetase [Porphyromonas gingivalis W83]
 gi|392609003|gb|EIW91827.1| alanine--tRNA ligase [Porphyromonas gingivalis W50]
          Length = 876

 Score =  603 bits (1556), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 330/749 (44%), Positives = 443/749 (59%), Gaps = 64/749 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R++F  FF  K H    S+P+V   DPTL+F NAGMNQ+K I LG    NT+ +K 
Sbjct: 4   SKEIRESFKTFFASKGHKIVPSAPMVIKGDPTLMFTNAGMNQFKDIILG----NTE-AKY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           TR  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAIEWAWE L  V 
Sbjct: 59  TRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAIEWAWEYLVTVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
            L   RLYAT F G+ + GL  DNEA   W +FLP  R++     DNFWEMGDTGPCGPC
Sbjct: 119 GLDPQRLYATVFEGNPEEGLDRDNEAASYWAQFLPEERIINGNKHDNFWEMGDTGPCGPC 178

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D   + + A      L+N   P  IEIWN+VF+Q+NR++D SL PLP K +DTG+
Sbjct: 179 SEIHIDLRSDEERAQINGLELINKSHPQVIEIWNLVFMQYNRKADASLTPLPHKVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF P+   +   TG       +G  +    D+A RVVADHI
Sbjct: 239 GFERLCMALQGKTSNYDTDVFQPLIRTLATMTG-------IGYGEDSTSDIAMRVVADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++FAI DG  P N    YV+RRILRRAVRYG   L  ++ F   L+  ++  MGD +P
Sbjct: 292 RTIAFAITDGQLPSNAKAGYVIRRILRRAVRYGYTFLHCREAFMYRLLPTLIDTMGDAYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG---KVLSGQDAFILWDTYGF 471
           EL+ +   I  +I  EE SF +TL  GI   +K   D +     VL G  AF L+DT+GF
Sbjct: 352 ELQAQRELISRVIKEEEESFLRTLETGIRLLEKKIADNKATGSTVLDGVAAFELYDTFGF 411

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT L+  E G+ VD  GF+  M + +ER+R+A   +AG  +V+    +      G  
Sbjct: 412 PLDLTALILSENGMTVDESGFDTEMQKQKERARNAAAVEAGDWVVLREGESKF---SGYD 468

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            T+   + + ++  K   K  +                +VL+ + FYAE GGQ+ D G +
Sbjct: 469 FTETETEILRYRQVKQKNKEYFQ---------------VVLSDTPFYAEMGGQVGDSGQL 513

Query: 592 EGLFGSFY-VRNVQIYGGFVIHI-GSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
               G  Y + + +      +H+   L E     S  +  + +++ D+R+    NHT TH
Sbjct: 514 IDESGVAYDIFDTKRENNLSVHLMKKLPE-----STTDTFVARINQDKRRQAEANHTATH 568

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +L+ ALREVLG HV+QKGS V PE LRFDFSH   + PE +R++E +V+E+I+A+     
Sbjct: 569 LLHEALREVLGTHVEQKGSFVSPEVLRFDFSHFGKMSPEEIRKVEELVSERIRADFQREE 628

Query: 710 -KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
            ++  +AEA+ + G  A+FGE Y + VRV+  G                  S ELCGGTH
Sbjct: 629 FRDVPIAEAQAM-GAMALFGEKYGEEVRVLKYGS-----------------SVELCGGTH 670

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVT 797
           + +T    AF +++E  IA G+RRI AVT
Sbjct: 671 IPSTGMIGAFRIVTESSIASGVRRIEAVT 699


>gi|386016887|ref|YP_005935183.1| alanyl-tRNA synthetase AlaS [Pantoea ananatis AJ13355]
 gi|327394965|dbj|BAK12387.1| alanyl-tRNA synthetase AlaS [Pantoea ananatis AJ13355]
          Length = 875

 Score =  603 bits (1556), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 359/919 (39%), Positives = 515/919 (56%), Gaps = 81/919 (8%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    +      TR
Sbjct: 7   EIRQAFLDFFNSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGQEKRD-----YTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK EAI +AWELLT  + +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKKEAIAFAWELLTGEQWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFWEM 230
           +LP +RL+ T +          D+EA DIW   +  P  R++  G         DNFW+M
Sbjct: 122 KLPKERLWVTVY--------ETDDEAYDIWANDIGVPRERIIRIGDNKGSAYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPCSEI YD   +           D    IEIWNIVF+QFNR++DG++ PLP  
Sbjct: 174 GDTGPCGPCSEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMLPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+T++LQ+  SNY+ D+F  + +A+ + TGA   + K           + R
Sbjct: 234 SVDTGMGLERITAVLQHVNSNYEIDLFQTLIEAVAKVTGATDLNNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A+D FF  LV  +++V
Sbjct: 283 VIADHIRSCAFLIADGVIPSNENRGYVLRRIIRRAVRHGN-MLGAKDAFFYKLVAPLIQV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    EL++++A +  ++ +EE  F KTL +G+    +    +Q   L G+  F L+DT
Sbjct: 342 MGAAGEELQRQQAQVENVLKSEEEQFAKTLERGLALLDEELAKLQSDTLDGETVFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           +GFP DLT  +  ER L +D  GF  AM++ R+R+R A    A  + V+  DA +     
Sbjct: 402 FGFPADLTADVCRERNLKIDEAGFEKAMEQQRQRAREASGFGADYSNVIRIDAAS----- 456

Query: 529 GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDE 588
                  SFK     D  + +KA++   E ++++  G +  IVL  + FY E GGQ+ D 
Sbjct: 457 -------SFKGYEQLDLTATVKALFVNGEAVDALSAGQDAVIVLDETPFYGESGGQVGDT 509

Query: 589 GFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
           G ++G    F V++ Q YG  + HIG L+  +G+  VG+ +   VD  RR  I  NH+ T
Sbjct: 510 GELKGNNALFSVQDTQKYGQAIGHIGKLS--SGQLRVGDRLEAVVDEARRARIRLNHSAT 567

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+L+ ALR+VLG+HV QKGS+V  + LRFDFSH + + P+ +R++E IVN QI+  L V 
Sbjct: 568 HLLHAALRQVLGEHVAQKGSLVNDKYLRFDFSHFEAMKPQEIRQVEDIVNAQIRRNLPVE 627

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
           ++   L  AK   G  A+FGE Y   VRV+ +G                  S ELCGGTH
Sbjct: 628 TRVMDLEAAKA-KGAMALFGEKYDQQVRVLTMG----------------DFSVELCGGTH 670

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEK 828
            + T +   F + +E G A GIRRI A+T   A     A  S  +++    K   S L +
Sbjct: 671 AARTGDIGLFRIQAESGTAAGIRRIEAITGEAALAQVYAQSSQLQDIAQLVKANSSNLNE 730

Query: 829 ------NQVRKAQKKVAEENLQKAVKVATETAEAAAS-NGKPFCISRVEVGLDAAAVREA 881
                 + +R  +K++ +   Q+A + + +    A    G    ++ +    D   +R  
Sbjct: 731 KVRGLVDHLRSLEKELQQLRDQQAAQESAQLGNHAVDVKGVKLLVTELS-NTDPKMLRTM 789

Query: 882 VLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKG 941
           V  +  Q G  ++V +T     K  + AGV +  D + +++  E L A L P  G  G G
Sbjct: 790 VDDLKNQLGSAIIVLAT-VADGKVSLIAGVTK--DLTDRVKAGE-LIAELAPKVGGKGGG 845

Query: 942 KGGLASGQGTDAAQVTPAM 960
           +  +A   G+DA  +  A+
Sbjct: 846 RPDMAQAGGSDATALKGAL 864


>gi|297616546|ref|YP_003701705.1| alanyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
 gi|297144383|gb|ADI01140.1| alanyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
          Length = 877

 Score =  603 bits (1556), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 369/902 (40%), Positives = 518/902 (57%), Gaps = 99/902 (10%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           ++++R  F  +F +  H   +SS +VP NDPTLLF NAGMNQ+K +FLG           
Sbjct: 4   SSEIRKMFLDYFAENGHTVVESSSLVPANDPTLLFTNAGMNQFKDVFLGIDK-----RPY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           TRA ++QKC+RAGGKHNDL+ VG+   HHTFFEMLGN+SFGDYFK EAI +AW+LLT+V 
Sbjct: 59  TRATSSQKCVRAGGKHNDLETVGRTARHHTFFEMLGNFSFGDYFKREAIFYAWDLLTRVI 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKF--LPASRVLPFGCKDNFWEMGDTGPCG 237
            LP +RL+ T F          D+EA ++W +   +   +++  G KDNFW MGDTGPCG
Sbjct: 119 GLPPERLWVTIF--------TDDDEAFELWQEIAGISPQKIVRMGEKDNFWAMGDTGPCG 170

Query: 238 PCSEIHYDRTGNRDAASLVNNDDPTC----------IEIWNIVFIQFNRESDGSLKPLPA 287
           PCSEI YDR            D P C          +EIWN+VF+QFNR+  G+L PLP 
Sbjct: 171 PCSEIIYDR------GEKYRCDAPLCALGVCDCDRWLEIWNLVFMQFNRDEAGNLTPLPR 224

Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
             +DTG+G ER+TSILQ   SN+DTD+F+PI   I++ TG +   G  G          +
Sbjct: 225 PSIDTGMGLERITSILQGVDSNFDTDLFIPIIQKIEEMTGKKYDRGPGG--------FPF 276

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RV+ADH R  +F I DG  P NEGR YVLRRILRRAVR+G  +L  +  F   +V +VV 
Sbjct: 277 RVIADHSRACTFLIGDGVLPSNEGRGYVLRRILRRAVRFGR-LLGIEAPFLYRMVGVVVD 335

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG---KVLSGQDAFI 464
            M D +P+L  ++  + +++  EE  F  TL +GI K  +  +  Q    K +SGQDAF+
Sbjct: 336 KMKDSYPDLVDKQEFVAKVVRMEEERFFVTLNEGIRKVGEIIERCQAEGRKDISGQDAFM 395

Query: 465 LWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAA 524
           L+DTYGFPLDLT+ MAEE GL V+ E FN  M+E RER+R AQ     G      +   A
Sbjct: 396 LYDTYGFPLDLTEDMAEENGLGVNKEDFNRLMEEQRERARRAQK----GEDAFAQEKRLA 451

Query: 525 LHKRGVLATDDSFKFIWFQDHKSV--IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQG 582
               G+ +TD    F  +Q   ++  I+AI +G E ++ +  G  + +VLA + FYAE G
Sbjct: 452 EMLEGIPSTD----FEGYQRLFTLTQIQAIISGDEELDLIRDGGAI-LVLAQTPFYAESG 506

Query: 583 GQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIA 642
           GQ+ D+G I+G  G+F V +V+   G+++H G +    G     EEV  +VD  RR   A
Sbjct: 507 GQVADKGVIKGSEGTFIVDDVKKVAGWILHYGRVQ---GILVKNEEVQAEVDEQRRLATA 563

Query: 643 PNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQI- 701
            NHT TH+L+ ALR V+G+H  QKGS+V PE+LRFDFSH  P+  E ++ IE IVN +I 
Sbjct: 564 RNHTATHLLHRALRMVVGEHAQQKGSLVEPERLRFDFSHFAPLTEEEIQAIEDIVNRKIW 623

Query: 702 ---KAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLS 758
              K E+D+    ATL EAK   G  A+FGE Y D VRV++IG                 
Sbjct: 624 DLEKVEVDL----ATLEEAKQ-KGAMALFGEKYGDEVRVISIG----------------D 662

Query: 759 ISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDA 818
            S ELCGGTH+ NT +   F +++E  I  G+RR+ A+T     +A +   + E+E+  A
Sbjct: 663 FSIELCGGTHVENTGQIGLFKIINEGSIGAGLRRVEALT---GPRALDYLNAQERELKTA 719

Query: 819 SKI----EGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEV--- 871
           + +       L ++ +    + K +E+ ++ A+K      EAA    + F ++ V+V   
Sbjct: 720 ASVLKVPAQELAQRVESLSRELKESEKEIE-ALKNKLARQEAAELLQQAFEVNGVKVLVA 778

Query: 872 ---GLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLT 928
              G D A +R+    + ++ G  V+V  +       +V     E +D   +L   E ++
Sbjct: 779 EMSGQDMAVLRQNGEMLRDKLGRAVVVLGSARDGKVNLVVFVAKELTD---RLHAGEIVS 835

Query: 929 AA 930
           AA
Sbjct: 836 AA 837


>gi|432793848|ref|ZP_20027930.1| alanyl-tRNA synthetase [Escherichia coli KTE78]
 gi|432795347|ref|ZP_20029408.1| alanyl-tRNA synthetase [Escherichia coli KTE79]
 gi|431337918|gb|ELG25005.1| alanyl-tRNA synthetase [Escherichia coli KTE78]
 gi|431350828|gb|ELG37633.1| alanyl-tRNA synthetase [Escherichia coli KTE79]
          Length = 876

 Score =  603 bits (1556), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 361/916 (39%), Positives = 515/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  K +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + ++++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   SF V + Q YG  + HIG L   AG   VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A G+RRI AVT   A     A      EV         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATVHADSDRLNEVAHLLKGDSNN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            A K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S + +G++  
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSEL-IGVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|313207039|ref|YP_004046216.1| alanyl-tRNA synthetase [Riemerella anatipestifer ATCC 11845 = DSM
           15868]
 gi|383486351|ref|YP_005395263.1| alanyl-tRNA synthetase [Riemerella anatipestifer ATCC 11845 = DSM
           15868]
 gi|312446355|gb|ADQ82710.1| alanyl-tRNA synthetase [Riemerella anatipestifer ATCC 11845 = DSM
           15868]
 gi|380461036|gb|AFD56720.1| alanyl-tRNA synthetase [Riemerella anatipestifer ATCC 11845 = DSM
           15868]
          Length = 867

 Score =  603 bits (1556), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 345/871 (39%), Positives = 491/871 (56%), Gaps = 73/871 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R  F  FF+ K H+   S+P+V  +DPTL+F+N+GM Q+K  FLG   P     K 
Sbjct: 3   SQQIRQAFLDFFKSKEHLIVPSAPIVLKDDPTLMFSNSGMTQFKDYFLGYKTP-----KA 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  +TQKC+R  GKHNDLDDVG+DTYHHT FEMLGNWSFG+YFK EAI +AWELLT+VY
Sbjct: 58  PRIADTQKCLRVSGKHNDLDDVGRDTYHHTMFEMLGNWSFGNYFKKEAIVFAWELLTEVY 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           ++P + LY T F GD    L  D EA + W  ++   R+L    KDNFWEMG++GPCGPC
Sbjct: 118 KIPKENLYVTIFEGDATENLERDQEAYNCWKSYIAEDRILNGNKKDNFWEMGESGPCGPC 177

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + +      LVN D P  +E+WN+VF++FNR++DGSL+ LPA+HVDTG+
Sbjct: 178 SEIHIDLRSEEEKSKVSGKDLVNQDHPQVVEVWNLVFMEFNRKADGSLEKLPAQHVDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF P+   ++Q +  + Y G +   D +K D+A RVV DHI
Sbjct: 238 GFERLCMALQGKTSNYDTDVFTPLIAKVEQLS-QKKYEGLL---DNEK-DIAIRVVVDHI 292

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R +SFAIADG  P N G  YV+RRILRRA+ Y    L  ++ F   LV ++   MG  FP
Sbjct: 293 RAVSFAIADGQLPSNTGAGYVIRRILRRAISYSYRFLDMKEVFLYELVAVLKNQMGAFFP 352

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG---KVLSGQDAFILWDTYGF 471
           E++++E  + E+I  EE SF KT+  G+ + +   Q+      K L G + F L+DTYGF
Sbjct: 353 EIEKQEKLVTEVIKEEENSFLKTIEHGLVRLENIIQETLKKGEKTLPGAEVFELYDTYGF 412

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           P DL++++AEE+GL VD +GF+  M++ ++RS+ +  ++    + +              
Sbjct: 413 PADLSRIIAEEKGLTVDEKGFDEEMEKQKQRSKKSSAQKVYDWVTL-------------- 458

Query: 532 ATDDSFKFIWFQ--DHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEG 589
             D++  F+ +   +HK  I   Y   E  + V       +V   + FYAE GGQ+ D+G
Sbjct: 459 -KDETESFVGYDQLEHKVFITR-YRKLENKDGVF----YQVVFNQTPFYAEGGGQVGDKG 512

Query: 590 FIEGLFGSFYVRNVQIYGGFVIH-IGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
           +IE   G F V + +      I  I  L +   +     E    VD   R+    NH+ T
Sbjct: 513 YIESEEGQFEVLDTKKENNLNISLIKDLPQAPEK-----EFTAVVDSRLRRNTQANHSAT 567

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+L+ ALREVLG HV+QKGS V  + LRFDFSH   +  E +  +E  VN +IK  + + 
Sbjct: 568 HLLHEALREVLGTHVEQKGSFVGADYLRFDFSHFSKMSDEEIALVEEKVNAKIKENISLQ 627

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
                  +     G  A+FGE Y D VR++  G                  S ELCGGTH
Sbjct: 628 EYRNIPIQEALDKGAMALFGEKYGDNVRMIQFGS-----------------SKELCGGTH 670

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFE------AACSLEKEVDDASKIE 822
             +T E   F ++SE   A GIRRI A+++  A   F+         SL  +  D  K  
Sbjct: 671 AKSTSEIGLFKIVSESSTAAGIRRIEAISSEKANAYFKELEEQMTQLSLALKTKDVQKSV 730

Query: 823 GSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAV 882
             LLE+NQ  K++ +  ++ L K  + A    +  +  GK   +      LDAA+V++ V
Sbjct: 731 EKLLEENQKLKSELEAIKKELAKN-ETADWKNQFVSKEGKNLLVKM--TSLDAASVKDIV 787

Query: 883 LKVIEQKGMPVMVFSTDETTNKAVVCAGVPE 913
            ++ ++    V+V  +D   +K ++  GV +
Sbjct: 788 FQLKKEVPTSVIVILSD-ANDKPMISVGVSD 817


>gi|407791039|ref|ZP_11138128.1| alanyl-tRNA ligase [Gallaecimonas xiamenensis 3-C-1]
 gi|407201682|gb|EKE71679.1| alanyl-tRNA ligase [Gallaecimonas xiamenensis 3-C-1]
          Length = 873

 Score =  603 bits (1556), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 360/931 (38%), Positives = 522/931 (56%), Gaps = 81/931 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++RD F  +F+DK H    SS ++P NDPTLLF NAGM Q+K +FLG+          
Sbjct: 5   SAEIRDAFLNYFKDKGHQIVPSSSLIPGNDPTLLFTNAGMVQFKDVFLGS-----DKRAY 59

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           TRA ++Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK  AI++AWE LT+V 
Sbjct: 60  TRATSSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKEGAIQYAWEFLTQVV 119

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
           +LPA++L+ T +          D+EA DIW K   +P  R++  G         DNFW M
Sbjct: 120 KLPAEKLWVTVY--------ETDDEAYDIWAKEVGVPTDRIIRIGDNKGAPYASDNFWSM 171

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR  DG ++PLP  
Sbjct: 172 GDTGPCGPCTEIFYDHGEHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRHGDGRMEPLPKP 231

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+++ILQ+  SNY+ D+F  +  A  +A G+     K           + R
Sbjct: 232 SVDTGMGLERISAILQHVHSNYEIDIFQHLIKAAAKAIGSEDLENK-----------SLR 280

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           VVADHIR+ SF + DG  P NEGR YVLRRI+RRAVR+G++ L A + FF  LV  ++ V
Sbjct: 281 VVADHIRSCSFLVVDGVMPSNEGRGYVLRRIVRRAVRHGAQ-LGASEPFFYKLVAALIDV 339

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MGD +PELK+++A I + +  EE  F KTL +G++   +A  D+QG V+ G   F L+DT
Sbjct: 340 MGDAYPELKEKQAIIEKALLMEEEQFRKTLERGLKLLDEALADIQGSVIPGDVVFKLYDT 399

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +A ERGL +D  GF  AM+  R+R++ A N  A     +D D        
Sbjct: 400 YGFPVDLTNDVARERGLTLDEAGFETAMEAQRQRAKQASNFGADYNSRLDIDCQT----- 454

Query: 529 GVLATDDSFKFIWFQDHKSV--IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
                    +F  +   + V  + A++ G + ++SV  G+EV +VL  + FY E GGQ+ 
Sbjct: 455 ---------QFSGYDGVRDVSPVVALFKGGDAVDSVQAGDEVLVVLERTPFYGESGGQVG 505

Query: 587 DEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
           D G +        + N    G   +H G + EG+    +G+++  +VD  RR  I  NH+
Sbjct: 506 DTGELSSDGARILIHNTTKSGDAFVHHGKVAEGS--IKLGDKLKAEVDKTRRDAIRLNHS 563

Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD 706
            TH+ + ALR+VLG+HV QKGS+V  E++RFDFSH + V    +  IE +VN +I+A   
Sbjct: 564 ATHLAHAALRKVLGEHVTQKGSLVDSERMRFDFSHFEGVKGVEISEIERLVNNEIRANHA 623

Query: 707 VFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGG 766
           V ++   + EAK   G  A+FGE Y D VRVV +G                  S ELCGG
Sbjct: 624 VTTRLMQIEEAKAA-GAMALFGEKYDDEVRVVQMG----------------DFSIELCGG 666

Query: 767 THLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLL 826
           TH+S T +   F ++SE GIA G+RRI AVT   A +  +    L  E+  + K + + L
Sbjct: 667 THVSRTGDIGLFKVISEGGIAAGVRRIEAVTGEAALEWLQGREQLLGELAGSLKTDVAGL 726

Query: 827 ------EKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVRE 880
                 + ++ ++ +K++ +   Q A    +  AE A   G    +     G D  ++RE
Sbjct: 727 ADRFAQQLDKTKQLEKELEKAKAQLAASAGSALAEQAEDLGGTKLLVAELPGADPKSLRE 786

Query: 881 AVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGK 940
            V K+ ++ G  V+V +      K  + AGV +    + +++  E +      + G+ G 
Sbjct: 787 LVDKLKDKLGEAVVVLAV-PADGKVSLIAGVSKG--LTAKVKAGELVGMVAAQVGGKGG- 842

Query: 941 GKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           G+  +A   GTD A ++ A+    ++   +L
Sbjct: 843 GRPDMAQAGGTDVAALSGALATVKDWVQARL 873


>gi|346226024|ref|ZP_08847166.1| alanyl-tRNA synthetase [Anaerophaga thermohalophila DSM 12881]
          Length = 880

 Score =  603 bits (1556), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 344/792 (43%), Positives = 466/792 (58%), Gaps = 66/792 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           AT+VR  FF FF  K H+   S+P+V  NDPTL+F NAGMNQ+K IFLG   P     + 
Sbjct: 3   ATEVRRRFFDFFRSKQHIIVASAPMVVKNDPTLMFTNAGMNQFKDIFLGNRKP-----EH 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  N QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI+WAWE LTK  
Sbjct: 58  PRVANAQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKEEAIDWAWEFLTKEL 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
            +  +RLYAT F GDE   +  D EA   W K+LP   ++    KDNFWEMGDTGPCGPC
Sbjct: 118 GIDKNRLYATVFEGDENDNVKRDEEAALAWQKYLPEKHIIDGNKKDNFWEMGDTGPCGPC 177

Query: 240 SEIHYD-----RTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     +  ++    LVN D P  IEIWN+VFIQ+NR + G L  LP KHVDTG+
Sbjct: 178 SEIHIDLRDIHQRKSKPGYELVNKDHPEVIEIWNLVFIQYNRRASGELVALPQKHVDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL  +LQ K SNYDTD+F PI   I   TG      + GA  +++ D+A RV+ADH+
Sbjct: 238 GFERLCRVLQGKSSNYDTDIFQPIIRQIAAFTGI-----EYGA--SEETDIAMRVIADHL 290

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++F+I DG  P N    YV+RRILRRAVRYG   L  +  F +GL+  +++VMGD +P
Sbjct: 291 RTIAFSITDGQLPSNNKAGYVIRRILRRAVRYGYTFLNVRRPFMSGLIPALIEVMGDAYP 350

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG---KVLSGQDAFILWDTYGF 471
           ELK +   I ++I  EE SF KTL  GI       +       KV+SG+ AF L+DTYGF
Sbjct: 351 ELKAQHELIDKVIYEEEESFLKTLETGITLLDNIIERTLSDNYKVVSGKVAFELYDTYGF 410

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E+GL+V+ + F+  M+  + R+R+A + + G  +V+  D           
Sbjct: 411 PLDLTELILSEKGLVVNRQEFDKEMEAQKARARNAASVETGDWVVLKDD----------- 459

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
             ++ F    FQ+ +     +Y        V   ++  +V   + FYAE GGQ+ D GFI
Sbjct: 460 -NEEEFVGYDFQETE-----VYITRYRKVKVKNKDQYQLVFNITPFYAESGGQVGDSGFI 513

Query: 592 EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHML 651
           +       + + +     ++HI +    A    + +     V+ DRR+  A NHT TH+L
Sbjct: 514 QNSNEKIAILDTKKENDLIVHISNELPSA----IEDTFRAVVNMDRRRSTARNHTATHLL 569

Query: 652 NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS-K 710
           + ALR+VLG+HV+QKGS+V P+ LRFDFSH + V PE +R+IE +VN  I+A ++    +
Sbjct: 570 HKALRKVLGNHVEQKGSLVHPDYLRFDFSHFQKVSPEDIRQIEKLVNADIRANINREEHR 629

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
           E  + +A+ +  + A+FGE Y D VR +  G  V                 ELCGGTH+ 
Sbjct: 630 EVPIDKAREMGAI-ALFGEKYGDVVRTIGFGECV-----------------ELCGGTHVD 671

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKNQ 830
            T E   F ++ E  ++ GIRRI AV+     KA E A    +  D   +I   +  K Q
Sbjct: 672 ATGEIGFFRIIGESSVSAGIRRIEAVS---GIKAEELAY---EHNDLIGEIAAMVKSKGQ 725

Query: 831 VRKAQKKVAEEN 842
           +RK  + +  +N
Sbjct: 726 LRKNIENLINQN 737


>gi|444376503|ref|ZP_21175747.1| Alanyl-tRNA synthetase [Enterovibrio sp. AK16]
 gi|443679481|gb|ELT86137.1| Alanyl-tRNA synthetase [Enterovibrio sp. AK16]
          Length = 860

 Score =  603 bits (1556), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 372/925 (40%), Positives = 518/925 (56%), Gaps = 86/925 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F +FFE K H    SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EIRRAFLEFFESKGHTIVPSSSLVPANDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT+V +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIAFAWEFLTEVLQL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           P DRL  T +          D+EA  +W +   +PA R++  G K        DNFW+MG
Sbjct: 122 PKDRLMVTVY--------ETDDEAFALWNEKIGIPADRIVRIGDKKGGKPYESDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKH 289
           DTGPCGPC+EI YD   +           D    IEIWN VF+Q+NR +DG+++PLP   
Sbjct: 174 DTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRFIEIWNNVFMQYNRHADGTMEPLPKPS 233

Query: 290 VDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRV 349
           VDTG+G ER+ +I+Q   SNY+ D+F  +  +  +  G    S           + + RV
Sbjct: 234 VDTGMGIERIAAIMQGVHSNYEIDIFQTLIKSAAEVIGYEDLS-----------NQSLRV 282

Query: 350 VADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVM 409
           VADHIR+ +F I DG  P NEGR YVLRRI+RRAVR+G++ L A   +F  LV  + ++M
Sbjct: 283 VADHIRSCAFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGATGSYFYKLVGPLAEIM 341

Query: 410 GDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTY 469
           G    ELK ++A + +++  EE +FG+TL +G+     A + + GKVL G+  F L+DTY
Sbjct: 342 GTAGEELKNQQAMVEKVLKIEEENFGRTLDRGMAILNDALEALDGKVLDGETVFKLYDTY 401

Query: 470 GFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRG 529
           GFP DLT  +A ERG  +D EGF +AM+E R+R+R A      G    D ++        
Sbjct: 402 GFPADLTNDVARERGFTIDEEGFESAMEEQRQRAREA------GQFGTDYNS-------- 447

Query: 530 VLATDDSFKFIWF--QDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFD 587
           V+  + + +F  +   + K +I  I+      E++   +E  I++  + FYAE GGQ  D
Sbjct: 448 VIKVEGNSEFTGYGATEGKGLITDIFVDGMASETLATADEAVIIMDQTPFYAESGGQCGD 507

Query: 588 EGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTC 647
            GF+    G F V + Q YG  +   G L +G    SVG+ V  KV+ +RR+ IA NH+ 
Sbjct: 508 AGFLMTDSGKFEVIDTQKYGAAIGLRGKLVDGM--LSVGDNVEAKVNAERRQAIALNHSA 565

Query: 648 THMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDV 707
           TH+L+ ALR VLG+HV QKGS+V  E LRFDFSH + V PE LR +E +VNEQI+   DV
Sbjct: 566 THLLHEALRIVLGEHVQQKGSLVRAEGLRFDFSHLEAVKPEELRAVEKLVNEQIRRNHDV 625

Query: 708 FSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGT 767
            S E    EA    G  A+FGE Y D VRV+ +G                  S ELCGGT
Sbjct: 626 -STEIMDIEAAKAKGAMALFGEKYDDNVRVLTMG----------------DFSIELCGGT 668

Query: 768 HLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACS-LEKEVDDASKIEGSLL 826
           H + T +     ++SE GIA G+RRI AVT   A  AF +      K+V + S+     L
Sbjct: 669 HANRTGDIGMLKIVSEGGIAAGVRRIEAVTGQGAEDAFYSQQQEFAKKVSE-SQSRAKSL 727

Query: 827 EKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVI 886
           EK   +  +K  A+E+     KV          NG    IS+++ G D  A+R  V  + 
Sbjct: 728 EKEIQQLKEKLAAQESASLINKVQD-------INGIKVLISKLD-GADNKALRTMVDDLK 779

Query: 887 EQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLA 946
            Q G  V VF  + + +K  + AGV +  D + +++  E +    Q + G+ G G+  +A
Sbjct: 780 NQMGSGV-VFLGNVSDDKVGLIAGVTK--DLTGKVKAGELVNMVAQQVGGKGG-GRPDMA 835

Query: 947 SGQGTDAAQVTPAMDLAAEFAAMKL 971
              G+D A +  A++  A +   +L
Sbjct: 836 QAGGSDTAALPAALETVAPWLTERL 860


>gi|378765972|ref|YP_005194433.1| alanyl-tRNA synthetase [Pantoea ananatis LMG 5342]
 gi|365185446|emb|CCF08396.1| Alanyl-tRNA synthetase [Pantoea ananatis LMG 5342]
          Length = 875

 Score =  603 bits (1556), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 358/919 (38%), Positives = 515/919 (56%), Gaps = 81/919 (8%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    +      TR
Sbjct: 7   EIRQAFLDFFNSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGQEKRD-----YTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK EAI +AWELLT  + +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKKEAIAFAWELLTGEQWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFWEM 230
           +LP +RL+ T +          D+EA DIW   +  P  R++  G         DNFW+M
Sbjct: 122 KLPKERLWVTVY--------ETDDEAYDIWANDIGVPRERIIRIGDNKGSAYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPCSEI YD   +           D    IEIWNIVF+QFNR++DG++ PLP  
Sbjct: 174 GDTGPCGPCSEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMLPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+T++LQ+  SNY+ D+F  + +A+ + TGA   + K           + R
Sbjct: 234 SVDTGMGLERITAVLQHVNSNYEIDLFQTLIEAVAKVTGATDLNNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A+D FF  LV  +++V
Sbjct: 283 VIADHIRSCAFLIADGVIPSNENRGYVLRRIIRRAVRHGN-MLGAKDAFFYKLVAPLIQV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    EL++++A +  ++ +EE  F KTL +G+    +    +QG  L G+  F L+DT
Sbjct: 342 MGAAGEELQRQQAQVENVLKSEEEQFAKTLERGLALLDEELAKLQGDTLDGETVFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           +GFP DLT  +  ER L +D  GF  AM++ R+R+R A    A  + ++  DA +     
Sbjct: 402 FGFPADLTADVCRERNLKIDEAGFEKAMEQQRQRAREASGFGADYSNMIRIDAAS----- 456

Query: 529 GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDE 588
                  SFK     D  + +K ++   E ++++  G +  IVL  + FY E GGQ+ D 
Sbjct: 457 -------SFKGYEQLDLTATVKGLFVNGEAVDALSAGQDAVIVLDETPFYGESGGQVGDT 509

Query: 589 GFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
           G ++G    F V++ Q YG  + HIG L+  +G+  VG+ +   VD  RR  I  NH+ T
Sbjct: 510 GELKGNNALFSVKDTQKYGQAIGHIGKLS--SGQLRVGDRLEAVVDEARRARIRLNHSAT 567

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+L+ ALR+VLG+HV QKGS+V  + LRFDFSH + + P+ +R++E IVN QI+  L V 
Sbjct: 568 HLLHAALRQVLGEHVAQKGSLVNDKYLRFDFSHFEAMKPQEIRQVEDIVNAQIRRNLPVE 627

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
           ++   L  AK   G  A+FGE Y   VRV+ +G                  S ELCGGTH
Sbjct: 628 TRVMDLEAAKA-KGAMALFGEKYDQQVRVLTMG----------------DFSVELCGGTH 670

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEK 828
            + T +   F + +E G A GIRRI A+T   A     A  S  +++    K   S L +
Sbjct: 671 AARTGDIGLFRIQAESGTAAGIRRIEAITGEAALAQVYAQSSQLQDIAQLVKANSSNLNE 730

Query: 829 ------NQVRKAQKKVAEENLQKAVKVATETAEAAAS-NGKPFCISRVEVGLDAAAVREA 881
                 + +R  +K++ +   Q+A + + +    A    G    ++ +    D   +R  
Sbjct: 731 KVRGLVDHLRSLEKELQQLRDQQAAQESAQLGNHAVDVKGVKLLVTELS-NTDPKMLRTM 789

Query: 882 VLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKG 941
           V  +  Q G  ++V +T     K  + AGV +  D + +++  E L A L P  G  G G
Sbjct: 790 VDDLKNQLGSAIIVLAT-VADGKVSLIAGVTK--DLTDRVKAGE-LIAELAPKVGGKGGG 845

Query: 942 KGGLASGQGTDAAQVTPAM 960
           +  +A   G+DA  +  A+
Sbjct: 846 RPDMAQAGGSDATALKGAL 864


>gi|432598844|ref|ZP_19835115.1| alanyl-tRNA synthetase [Escherichia coli KTE62]
 gi|431128714|gb|ELE30890.1| alanyl-tRNA synthetase [Escherichia coli KTE62]
          Length = 876

 Score =  603 bits (1556), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 361/916 (39%), Positives = 515/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  K +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNESRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF+ AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFDAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + ++++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLEQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   SF V + Q YG  + HIG L   AG   VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A G+RRI AVT   A     A      EV         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATVHADSDRLSEVAHLLKGDSNN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            A K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|329957545|ref|ZP_08298020.1| alanine--tRNA ligase [Bacteroides clarus YIT 12056]
 gi|328522422|gb|EGF49531.1| alanine--tRNA ligase [Bacteroides clarus YIT 12056]
          Length = 873

 Score =  603 bits (1556), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 334/748 (44%), Positives = 440/748 (58%), Gaps = 63/748 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++RD+F  FFE K H    S+P+V  +DPTL+F NAGMNQ+K I LG        +K 
Sbjct: 4   ANEIRDSFKSFFESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGN-----HPAKY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWE L  V 
Sbjct: 59  KRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAWEYLVDVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +L    LYAT F G  + GL  DNEA   W +FLP   +L     DNFWEMGDTGPCGPC
Sbjct: 119 KLDPKDLYATVFEGSPEEGLERDNEAASYWEQFLPKDHILNGNKHDNFWEMGDTGPCGPC 178

Query: 240 SEIHYDRTGNRDAA-----SLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + A      LVN D P  IEIWN+VF+QFNR++DGSL+ LPAK +DTG+
Sbjct: 179 SEIHVDSRSEEEKAKVPGSQLVNKDHPQVIEIWNLVFMQFNRKADGSLEGLPAKVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF P+  AI   +G     GK      ++ D+A RV+ADHI
Sbjct: 239 GFERLVRTLQGKTSNYDTDVFQPMLKAIGDMSGTA--YGK-----NEQQDIAMRVIADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++F+I DG  P N    YV+RRILRRAVRYG   L  +  F   L+ ++++ MG  +P
Sbjct: 292 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLIENMGGAYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ--GKV-LSGQDAFILWDTYGF 471
           EL  ++  I ++I  EE SF +TL  GI    K   D +  GK  +SG+DAF L+DT+GF
Sbjct: 352 ELNAQKELIAKVIKEEEDSFLRTLETGIRLLDKTMADAKAAGKTEISGKDAFTLYDTFGF 411

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E G+  DI+ F+  M + ++R+R+A   + G  I +    T  +   G  
Sbjct: 412 PLDLTELILRENGMTADIKEFDAEMQQQKQRARNAAAVETGDWITLQEGTTEFV---GYD 468

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            T+     + ++  K   + +Y                IVL  + FYAE GGQ+ D G +
Sbjct: 469 YTEYETSILRYRQIKQKNQTLYQ---------------IVLDKTPFYAESGGQVGDTGVL 513

Query: 592 EGLFGSFYVRNVQIYGGFVIHI-GSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHM 650
              F +  V + +      IHI   L E      +   ++  VD D+R   A NH+ TH+
Sbjct: 514 VNEFETIEVIDTKKENNLPIHITKKLPE-----HLEAPLMACVDTDKRAACAANHSATHL 568

Query: 651 LNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS- 709
           L+ ALREVLG+HV+QKGS+V PE LRFDFSH + V  E +RR+E IVN +I+A + +   
Sbjct: 569 LDAALREVLGEHVEQKGSLVSPESLRFDFSHFQKVTDEEIRRVEHIVNAKIRANIPLKEY 628

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
           +   + EAK + G  A+FGE Y D VRV+                   S S E CGGTH+
Sbjct: 629 RNIPIEEAKEL-GAIALFGEKYGDHVRVIQ-----------------FSSSIEFCGGTHV 670

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVT 797
           + T       ++SE  +A G+RRI A T
Sbjct: 671 AATGNIGMIKIVSESSVAAGVRRIEAYT 698


>gi|373501244|ref|ZP_09591608.1| alanyl-tRNA synthetase [Prevotella micans F0438]
 gi|371950008|gb|EHO67869.1| alanyl-tRNA synthetase [Prevotella micans F0438]
          Length = 881

 Score =  603 bits (1555), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 346/852 (40%), Positives = 479/852 (56%), Gaps = 77/852 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R++F KFFE K HV   S+P+V  +DPTL+F NAGMNQ+K + LG  DP  +    
Sbjct: 3   ANEIRESFKKFFESKGHVIVPSAPMVIKDDPTLMFTNAGMNQWKDVILGIKDPEPR---- 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK  AI++AWE L  V 
Sbjct: 59  -RRTDSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKEGAIDYAWEYLVDVL 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +L  + LY T F G    G+  D EA   W K LPA  +L     DNFWEMGDTGPCGPC
Sbjct: 118 QLNPEDLYVTVFEGSPAEGIDRDEEAVRCWAKHLPADHILDGNRHDNFWEMGDTGPCGPC 177

Query: 240 SEIHYD------RTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTG 293
           SEIH D      + G      LVN D+P  IEIWNIVF+QFNR++DGSL PL    +DTG
Sbjct: 178 SEIHIDSRPPEEKNGGIPGRELVNKDNPQVIEIWNIVFMQFNRKADGSLTPLAMNVIDTG 237

Query: 294 LGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGAD---DADKVDMAYRVV 350
           +GFERL  +LQ K SNYDTD+F PI   I+Q +G R Y      D   + +K+D+A RVV
Sbjct: 238 MGFERLVRMLQGKHSNYDTDIFQPIIREIEQLSGMR-YGFTTPTDARTEQEKIDIAMRVV 296

Query: 351 ADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMG 410
           ADH+R ++F+IADG  PGN    YV+RRILRRAVRY    L  ++ F   L+N+++  MG
Sbjct: 297 ADHLRAVAFSIADGQLPGNAKAGYVIRRILRRAVRYAYTFLGQKEAFIYKLLNVLIHEMG 356

Query: 411 DVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK---VLSGQDAFILWD 467
             +PEL  +   I  +I  EE SF +TL KGI    +A   ++ K    L GQ+AF L+D
Sbjct: 357 QAYPELTAQRELIGRVIKEEEDSFLRTLDKGITLLNEAMHQLEEKHETQLDGQEAFRLFD 416

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
           TYGFPLDLT+L+  E G  VDIE FN  M + ++R+R+A       A+V + D T     
Sbjct: 417 TYGFPLDLTELICRENGYTVDIEAFNREMQQQKQRARNA-------AVVENEDWT----- 464

Query: 528 RGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVG--------IVLASSSFYA 579
                       I F+  +  +   Y  SE+   ++   +V         +VL  + FY 
Sbjct: 465 ------------ILFEGEQQFVG--YDYSEYECKIMRYRKVNQKKRSFYELVLDYTPFYG 510

Query: 580 EQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRK 639
           E GGQ+ D+G +     +  V + +      IHI    +   +      + C VD D+R+
Sbjct: 511 EMGGQVGDQGVLVSEDETIEVIDTKRENNQSIHI---VKELPKNPTAHFMAC-VDTDKRE 566

Query: 640 LIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNE 699
             A NHT TH+L++AL++VLG+H +QKGS V P+ LRFD +H + +  + LR++E IVN 
Sbjct: 567 ASAANHTATHLLDYALKQVLGEHAEQKGSYVSPDTLRFDVAHFQKITDDELRQVERIVNR 626

Query: 700 QIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSI 759
            I+ ++ +     T  +     G  A+FGE Y D VRVV  G                  
Sbjct: 627 MIRQDIPLDEHRDTPIDEARKMGAIALFGEKYGDTVRVVRFGP----------------- 669

Query: 760 SAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAF----EAACSLEKEV 815
           S E CGG H ++T     F ++SE  +A GIRRI A+T  +   A     +  C L+   
Sbjct: 670 SCEFCGGIHATSTGRIGFFKIISESSVAAGIRRIEAMTGQVCEDAIYLLQDTFCDLKAMF 729

Query: 816 DDASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDA 875
           ++AS ++  L++  +   A KK  E   Q+AV+   +     A       + +  + ++ 
Sbjct: 730 NNASDLKAVLMKYIEEHDAMKKSIERFRQQAVERTAKNLVEHAQTVNGIHVVKAVLPMEP 789

Query: 876 AAVREAVLKVIE 887
           A+ ++ V KV E
Sbjct: 790 ASAKDIVFKVRE 801


>gi|416274637|ref|ZP_11643756.1| Alanyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112]
 gi|320173452|gb|EFW48651.1| Alanyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112]
          Length = 876

 Score =  603 bits (1555), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 361/916 (39%), Positives = 515/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  K +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVEIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF+ AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFDAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + ++++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   SF V + Q YG  + HIG L   AG   VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A G+RRI AVT   A     A      EV         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAITTVHADSDRLSEVAHLLKGDSNN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            A K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|422800604|ref|ZP_16849101.1| alanyl-tRNA synthetase [Escherichia coli M863]
 gi|323966841|gb|EGB62270.1| alanyl-tRNA synthetase [Escherichia coli M863]
          Length = 876

 Score =  603 bits (1555), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 361/916 (39%), Positives = 515/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  K +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + ++++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G+  SF V + Q YG  + HIG L   AG   VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGVNFSFAVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A G+RRI AVT   A     A      EV         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATVHADSDRLSEVAHLLKGDSNN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            A K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|293392770|ref|ZP_06637088.1| alanine-tRNA ligase [Serratia odorifera DSM 4582]
 gi|291424629|gb|EFE97840.1| alanine-tRNA ligase [Serratia odorifera DSM 4582]
          Length = 875

 Score =  603 bits (1555), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 362/935 (38%), Positives = 527/935 (56%), Gaps = 91/935 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSK--L 119
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG       L K   
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLG-------LDKRAY 59

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           +RA  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFKN+AI +AWELLT   
Sbjct: 60  SRATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKNDAIAYAWELLTGEN 119

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFW 228
            + LP ++L+ T +          D+EA +IW     +PA R++  G         DNFW
Sbjct: 120 WFNLPKEKLWVTVY--------ETDDEAFNIWQNEIGIPAERIIRIGDNKGAPFASDNFW 171

Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
           +MGDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR+SDG++ PLP
Sbjct: 172 QMGDTGPCGPCTEIFYDHGDHIWGGPPGSAEEDGDRYIEIWNIVFMQFNRQSDGTMLPLP 231

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
              VDTG+G ER+ ++LQ+  SNY+ D+F  + +A+ + TGA     K           +
Sbjct: 232 KPSVDTGMGLERIAAVLQHVNSNYEIDLFRTLIEAVAKVTGATDLDNK-----------S 280

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            RV+ADHIR+ +F I+DG  P NE R YVLRRI+RRAVR+G+ +L A+D FF  LV  ++
Sbjct: 281 LRVIADHIRSCAFLISDGVIPSNENRGYVLRRIIRRAVRHGN-MLGAKDTFFYKLVAPLI 339

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
            VMG    ELK ++A + +++  EE  F +TL +G+    +    +QG  L G+ AF L+
Sbjct: 340 GVMGPAADELKSQQAMVEQVLKTEEEQFARTLERGLALLDEELAKLQGDTLDGETAFRLY 399

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFP+DLT  +  ERGL VD  GF  AM+  R R+R +            AD  +   
Sbjct: 400 DTYGFPVDLTADVCRERGLKVDEAGFEAAMEAQRRRARESSG--------FGADYNS--- 448

Query: 527 KRGVLATDDSFKFIWFQDH---KSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGG 583
              ++  D + +F  + DH   ++ I A++   + ++ +  G E  +VL ++ FY E GG
Sbjct: 449 ---LIRVDGASEFCGY-DHDQQQAKITALFRDGQPVDEIHAGEEAVVVLDATPFYGESGG 504

Query: 584 QIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAP 643
           Q+ D+G ++     F V + Q YG  + H G L +G     VG+ V   +D  RR  I  
Sbjct: 505 QVGDKGILKSAAAEFVVGDTQKYGQAIGHQGKLAQGV--LKVGDSVDALIDQVRRNRIRL 562

Query: 644 NHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKA 703
           NH+ TH+L+ ALR+VLG+HV QKGS+V  + LRFDFSH + + PE +R +E +VN+Q++ 
Sbjct: 563 NHSATHLLHAALRQVLGEHVAQKGSLVNDKYLRFDFSHFEAMKPEQIRAVEDLVNQQVRR 622

Query: 704 ELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAEL 763
            L V ++   L +AK   G  A+FGE Y D VRV+ +G                  S EL
Sbjct: 623 NLPVQTEVMALDDAKE-KGAMALFGEKYDDHVRVLTMG----------------DFSTEL 665

Query: 764 CGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEG 823
           CGGTH S T +   F + SE G A GIRRI AVT   A         L +EV    K +G
Sbjct: 666 CGGTHASRTGDIGLFRIQSESGTAAGIRRIEAVTGEGAIATLHQQSDLLQEVAHLVKGDG 725

Query: 824 SLLEK------NQVRKAQKKVAE-ENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
           + L +      ++ R  +K++ + ++ Q A++ A+ +++A   NG    +S+++  ++  
Sbjct: 726 NNLSEKVRAVLDRTRTLEKELQQLKDQQAALESASLSSKAKQVNGVKLLVSQLD-NVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSAIIVLAT-TAEGKVSLIAGVTK--DLTDRVKAGELIGNVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           + G G+  +A   G+D   +  A+D    + A KL
Sbjct: 842 KGG-GRPDMAQAGGSDVNALPAALDSVEAWVASKL 875


>gi|261253947|ref|ZP_05946520.1| alanyl-tRNA synthetase [Vibrio orientalis CIP 102891 = ATCC 33934]
 gi|417954911|ref|ZP_12597940.1| alanyl-tRNA synthetase [Vibrio orientalis CIP 102891 = ATCC 33934]
 gi|260937338|gb|EEX93327.1| alanyl-tRNA synthetase [Vibrio orientalis CIP 102891 = ATCC 33934]
 gi|342814482|gb|EGU49425.1| alanyl-tRNA synthetase [Vibrio orientalis CIP 102891 = ATCC 33934]
          Length = 860

 Score =  603 bits (1555), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 374/917 (40%), Positives = 518/917 (56%), Gaps = 92/917 (10%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR+ F KFFE K H    SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRNAFLKFFESKGHQIVDSSSLVPHNDPTLLFTNAGMNQFKDCFLGA-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT+  +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIAFAWEFLTETLQL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           P DRL  T +          D+EA DIW +   +PA R++  G K        DNFW MG
Sbjct: 122 PKDRLLVTVY--------ETDDEAFDIWNQKVGVPADRIVRIGDKEGGKQFESDNFWTMG 173

Query: 232 DTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
           DTGPCGPC+EI YD      G R        D    IEIWN VF+QFNR +DG+++PLP 
Sbjct: 174 DTGPCGPCTEIFYDHGEHIWGGRPGTP--EEDGDRFIEIWNNVFMQFNRHADGTMEPLPK 231

Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
             VDTG+G ER+++I+Q   SNY+ DVF  +  A  +  G    S           + + 
Sbjct: 232 PAVDTGMGIERISAIMQGVHSNYEIDVFQKLIKATAEVVGHEDLS-----------NQSL 280

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RV+ADHIR+ SF IADG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF+ LV ++ +
Sbjct: 281 RVIADHIRSCSFLIADGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGVFFHKLVGVLAE 339

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWD 467
           VMG    ELK+++A + +++  EE +FG+TL +G+    +A   ++GK L G+  F L+D
Sbjct: 340 VMGSAADELKKQQAVVEKVLRIEEENFGRTLERGMVILNEALDALEGKELDGETVFKLYD 399

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
           TYGFP DLT  +A ER   +D  GF  AM+E R+R+R A      G    D +AT     
Sbjct: 400 TYGFPADLTNDVARERDFTIDEAGFEKAMEEQRQRAREA------GQFGTDYNAT----- 448

Query: 528 RGVLATDDSFKFIWFQDHK--SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
              + T+   +F  +   +  S +  I+   E  ES+  G++  I+L+ + FYAE GGQ 
Sbjct: 449 ---IKTEAETEFCGYAGTQGNSNVAEIFVEGEAAESLSAGDKAIIILSETPFYAESGGQC 505

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D G ++   G F V + Q  G  + H G L EG    + G+EV   VD +RR  I+ NH
Sbjct: 506 GDAGVLKTESGLFKVEDTQKLGNAIAHHGVLAEGV--LAKGDEVEAVVDAERRAAISLNH 563

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+L+ ALR+VLG+HV QKGS+V PE LRFDFS+ + V P  L+ +E +VN Q++   
Sbjct: 564 SATHLLHAALRQVLGEHVAQKGSLVKPENLRFDFSNLEAVTPAELKEVERLVNAQVRRNH 623

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    +  AK   G  A+FGE Y D VRV+++G                  S ELCG
Sbjct: 624 VIETNIMDIESAKQ-KGAMALFGEKYDDEVRVLSMG----------------EFSTELCG 666

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFE--AACSLEKEVDDASKIEG 823
           G H SNT +   F + SE GIA GIRRI AVT   A  A E   A   EK V+ A K + 
Sbjct: 667 GIHASNTGDIGLFKITSEGGIAAGIRRIEAVTGEAALDAIEEQQAKYEEKLVESAQKAKS 726

Query: 824 SLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVL 883
             LEK +++K + K+A      A + A    +    NG    ++ +E G D   +R  V 
Sbjct: 727 --LEK-EIQKLKDKMA------AAESANIMGKVQDINGTKVLVAALE-GADNKNLRTMVD 776

Query: 884 KVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKG 943
            +  Q G  V++ + +   +K  + AGV +  D   +++  + +    + + G+ G G+ 
Sbjct: 777 DIKNQVGSGVILLA-NINDDKIGLIAGVTK--DLIGKVKAGDLVKMVAEQVGGKGG-GRP 832

Query: 944 GLASGQGTDAAQVTPAM 960
            +A   GTD A +  A+
Sbjct: 833 DMAQAGGTDVAALPDAI 849


>gi|218701187|ref|YP_002408816.1| alanyl-tRNA synthetase [Escherichia coli IAI39]
 gi|386625414|ref|YP_006145142.1| alanyl-tRNA synthetase [Escherichia coli O7:K1 str. CE10]
 gi|218371173|emb|CAR19004.1| alanyl-tRNA synthetase [Escherichia coli IAI39]
 gi|349739151|gb|AEQ13857.1| alanyl-tRNA synthetase [Escherichia coli O7:K1 str. CE10]
          Length = 876

 Score =  603 bits (1555), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 364/936 (38%), Positives = 523/936 (55%), Gaps = 91/936 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  K +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + ++++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   SF V + Q YG  + HIG L  G+    VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGANFSFAVEDTQKYGQAIGHIGKLATGS--LKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + +  E +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKSEEIRAVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A G+RRI AVT   A     A      EV         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATVHADSDRLSEVAHLLKGDSNN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            A K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKLR 972
           + G G+  +A   GTDAA +  A+     + + KL+
Sbjct: 842 KGG-GRPDMAQAGGTDAAVLPAALASVKGWVSAKLQ 876


>gi|91212055|ref|YP_542041.1| alanyl-tRNA synthetase [Escherichia coli UTI89]
 gi|117624928|ref|YP_853916.1| alanyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|218559685|ref|YP_002392598.1| alanyl-tRNA synthetase [Escherichia coli S88]
 gi|237706683|ref|ZP_04537164.1| alanyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|386600686|ref|YP_006102192.1| penicillin-binding protein 7 [Escherichia coli IHE3034]
 gi|386603251|ref|YP_006109551.1| alanyl-tRNA synthetase [Escherichia coli UM146]
 gi|417086132|ref|ZP_11953368.1| alanyl-tRNA synthetase [Escherichia coli cloneA_i1]
 gi|419944729|ref|ZP_14461203.1| alanyl-tRNA synthetase [Escherichia coli HM605]
 gi|422750285|ref|ZP_16804196.1| alanyl-tRNA synthetase [Escherichia coli H252]
 gi|422754539|ref|ZP_16808365.1| alanyl-tRNA synthetase [Escherichia coli H263]
 gi|422840683|ref|ZP_16888653.1| alanyl-tRNA synthetase [Escherichia coli H397]
 gi|432358997|ref|ZP_19602215.1| alanyl-tRNA synthetase [Escherichia coli KTE4]
 gi|432363861|ref|ZP_19607019.1| alanyl-tRNA synthetase [Escherichia coli KTE5]
 gi|432574812|ref|ZP_19811289.1| alanyl-tRNA synthetase [Escherichia coli KTE55]
 gi|432588996|ref|ZP_19825350.1| alanyl-tRNA synthetase [Escherichia coli KTE58]
 gi|432755548|ref|ZP_19990094.1| alanyl-tRNA synthetase [Escherichia coli KTE22]
 gi|432779628|ref|ZP_20013850.1| alanyl-tRNA synthetase [Escherichia coli KTE59]
 gi|432788620|ref|ZP_20022748.1| alanyl-tRNA synthetase [Escherichia coli KTE65]
 gi|432822056|ref|ZP_20055746.1| alanyl-tRNA synthetase [Escherichia coli KTE118]
 gi|432823566|ref|ZP_20057236.1| alanyl-tRNA synthetase [Escherichia coli KTE123]
 gi|433006148|ref|ZP_20194574.1| alanyl-tRNA synthetase [Escherichia coli KTE227]
 gi|433008816|ref|ZP_20197230.1| alanyl-tRNA synthetase [Escherichia coli KTE229]
 gi|433154766|ref|ZP_20339702.1| alanyl-tRNA synthetase [Escherichia coli KTE176]
 gi|433164651|ref|ZP_20349384.1| alanyl-tRNA synthetase [Escherichia coli KTE179]
 gi|122422735|sp|Q1R804.1|SYA_ECOUT RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|205830084|sp|A1AEN7.1|SYA_ECOK1 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|91073629|gb|ABE08510.1| alanyl-tRNA synthetase [Escherichia coli UTI89]
 gi|115514052|gb|ABJ02127.1| alanyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|218366454|emb|CAR04206.1| alanyl-tRNA synthetase [Escherichia coli S88]
 gi|226899723|gb|EEH85982.1| alanyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|294489971|gb|ADE88727.1| penicillin-binding protein 7 [Escherichia coli IHE3034]
 gi|307625735|gb|ADN70039.1| alanyl-tRNA synthetase [Escherichia coli UM146]
 gi|323951085|gb|EGB46961.1| alanyl-tRNA synthetase [Escherichia coli H252]
 gi|323957093|gb|EGB52818.1| alanyl-tRNA synthetase [Escherichia coli H263]
 gi|355350657|gb|EHF99853.1| alanyl-tRNA synthetase [Escherichia coli cloneA_i1]
 gi|371605694|gb|EHN94302.1| alanyl-tRNA synthetase [Escherichia coli H397]
 gi|388417871|gb|EIL77698.1| alanyl-tRNA synthetase [Escherichia coli HM605]
 gi|430875518|gb|ELB99053.1| alanyl-tRNA synthetase [Escherichia coli KTE4]
 gi|430884317|gb|ELC07257.1| alanyl-tRNA synthetase [Escherichia coli KTE5]
 gi|431106648|gb|ELE10847.1| alanyl-tRNA synthetase [Escherichia coli KTE55]
 gi|431119019|gb|ELE22034.1| alanyl-tRNA synthetase [Escherichia coli KTE58]
 gi|431300852|gb|ELF90399.1| alanyl-tRNA synthetase [Escherichia coli KTE22]
 gi|431325543|gb|ELG12926.1| alanyl-tRNA synthetase [Escherichia coli KTE59]
 gi|431335620|gb|ELG22749.1| alanyl-tRNA synthetase [Escherichia coli KTE65]
 gi|431367125|gb|ELG53611.1| alanyl-tRNA synthetase [Escherichia coli KTE118]
 gi|431378091|gb|ELG63082.1| alanyl-tRNA synthetase [Escherichia coli KTE123]
 gi|431512516|gb|ELH90607.1| alanyl-tRNA synthetase [Escherichia coli KTE227]
 gi|431522555|gb|ELH99787.1| alanyl-tRNA synthetase [Escherichia coli KTE229]
 gi|431672792|gb|ELJ39026.1| alanyl-tRNA synthetase [Escherichia coli KTE176]
 gi|431685482|gb|ELJ51052.1| alanyl-tRNA synthetase [Escherichia coli KTE179]
          Length = 876

 Score =  603 bits (1555), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 361/916 (39%), Positives = 515/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  K +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNESRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF+ AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFDAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + ++++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   SF V + Q YG  + HIG L   AG   VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A G+RRI AVT   A     A      EV         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATVHADSDRLSEVAHLLKGDSNN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            A K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|251785981|ref|YP_003000285.1| alanyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|253772448|ref|YP_003035279.1| alanyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254162628|ref|YP_003045736.1| alanyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|254289389|ref|YP_003055137.1| alanyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|242378254|emb|CAQ33029.1| alanyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|253323492|gb|ACT28094.1| alanyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|253974529|gb|ACT40200.1| alanyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|253978696|gb|ACT44366.1| alanyl-tRNA synthetase [Escherichia coli BL21(DE3)]
          Length = 876

 Score =  603 bits (1555), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 361/916 (39%), Positives = 515/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  K +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + ++++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   SF V + Q YG  + HIG L   AG   VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNTQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A G+RRI AVT   A     A      EV         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATVHADSDRLSEVAHLLKGDSNN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            A K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S++  G++  
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSKLS-GVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VVEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|417282120|ref|ZP_12069420.1| alanine--tRNA ligase [Escherichia coli 3003]
 gi|417284969|ref|ZP_12072260.1| alanine--tRNA ligase [Escherichia coli TW07793]
 gi|419701495|ref|ZP_14229094.1| alanyl-tRNA synthetase [Escherichia coli SCI-07]
 gi|419915901|ref|ZP_14434233.1| alanyl-tRNA synthetase [Escherichia coli KD1]
 gi|422970163|ref|ZP_16973956.1| alanyl-tRNA synthetase [Escherichia coli TA124]
 gi|371600541|gb|EHN89313.1| alanyl-tRNA synthetase [Escherichia coli TA124]
 gi|380346957|gb|EIA35246.1| alanyl-tRNA synthetase [Escherichia coli SCI-07]
 gi|386246449|gb|EII88179.1| alanine--tRNA ligase [Escherichia coli 3003]
 gi|386250210|gb|EII96377.1| alanine--tRNA ligase [Escherichia coli TW07793]
 gi|388382634|gb|EIL44484.1| alanyl-tRNA synthetase [Escherichia coli KD1]
          Length = 876

 Score =  603 bits (1554), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 361/916 (39%), Positives = 515/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  K +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF+ AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFDAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + ++++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKSVDAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   SF V + Q YG  + HIG L   AG   VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A G+RRI AVT   A     A      EV         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATVHADSDRLSEVAHLLKGDSNN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            A K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|432535030|ref|ZP_19772000.1| alanyl-tRNA synthetase [Escherichia coli KTE234]
 gi|431059238|gb|ELD68599.1| alanyl-tRNA synthetase [Escherichia coli KTE234]
          Length = 876

 Score =  603 bits (1554), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 361/916 (39%), Positives = 514/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  K +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + ++++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   SF V + Q YG  + HIG L   AG   VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A G+RRI AVT   A     A      EV         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGESAITTVHADSDRLSEVAHLLKGDSNN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            A K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|420381728|ref|ZP_14881168.1| alanyl-tRNA synthetase [Shigella dysenteriae 225-75]
 gi|391299235|gb|EIQ57199.1| alanyl-tRNA synthetase [Shigella dysenteriae 225-75]
          Length = 876

 Score =  603 bits (1554), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 361/916 (39%), Positives = 515/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  K +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKDVEIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF+ AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFDAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + ++++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   SF V + Q YG  + HIG L   AG   VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A G+RRI AVT   A     A      EV         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAITTVHADSDRLSEVAHLLKGDSNN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            A K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|387888227|ref|YP_006318525.1| alanyl-tRNA synthetase [Escherichia blattae DSM 4481]
 gi|414595434|ref|ZP_11445055.1| alanyl-tRNA synthetase [Escherichia blattae NBRC 105725]
 gi|386923060|gb|AFJ46014.1| alanyl-tRNA synthetase [Escherichia blattae DSM 4481]
 gi|403193598|dbj|GAB82707.1| alanyl-tRNA synthetase [Escherichia blattae NBRC 105725]
          Length = 875

 Score =  603 bits (1554), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 365/932 (39%), Positives = 520/932 (55%), Gaps = 85/932 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG           +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVSSSSLVPNNDPTLLFTNAGMNQFKDVFLGL-----DKRSYSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI +AWELLT  + +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAINFAWELLTGAQWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP DRL+ T +          D+EA DIW     +P  R++  G         DNFW+M
Sbjct: 122 NLPKDRLWVTVY--------ETDDEAFDIWANEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR+SDG++ PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSAEEDGDRYIEIWNIVFMQFNRQSDGTMLPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+   TGA+  S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRILIKAVADVTGAQDLSSK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A+D FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVLPSNENRGYVLRRIIRRAVRHGN-MLGAKDTFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++  + +++  EE  F +TL +G+         ++G  L G+ AF L+DT
Sbjct: 342 MGSAGDDLKRQQEMVEQVLKTEEEQFARTLERGLALLDDELTQLKGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFPLDLT  +  ER + VD  GFN AM+  R R+R +             D  + +   
Sbjct: 402 YGFPLDLTADVCRERNIKVDEAGFNAAMETQRRRARESSG--------FGTDYNSMIR-- 451

Query: 529 GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDE 588
             + T   FK     D    I A++   + ++ V PG E  +VL  + FYAE GGQ+ D+
Sbjct: 452 --VDTASEFKGYDTLDLNGTITALFVDGKSVDQVNPGQEAVVVLDKTPFYAESGGQVGDK 509

Query: 589 GFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
           G ++   G+F V + Q YG  + H G+L+ G    +VG+ V  +VD  RR  I  NH+ T
Sbjct: 510 GELKAASGTFQVTDTQKYGQAIGHQGTLSHGV--LTVGDRVEAQVDEARRARIRLNHSAT 567

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+++ ALR+VLG HV QKGS+V  + LRFDFSH + +  E +R +E +VN QI+  L V 
Sbjct: 568 HLMHAALRQVLGTHVAQKGSLVNDKALRFDFSHFEGMKAEEIRAVEDLVNAQIRRNLPVE 627

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
           +    L EAK   G  A+FGE Y D VRV+++G                  S ELCGGTH
Sbjct: 628 TNIMDLEEAKA-KGAMALFGEKYDDHVRVLSMG----------------DFSTELCGGTH 670

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEG---SL 825
            S T +   F +++E G A G+RRI AVT   A  A  A     +++  A  ++G   +L
Sbjct: 671 ASRTGDIGLFHIVAESGTAAGVRRIEAVTGEGAIAAVHAQSDQLQDI--AQLLKGDSHNL 728

Query: 826 LEK-----NQVRKAQKKVAEENLQKAVK-VATETAEAAASNGKPFCISRVEVGLDAAAVR 879
            EK     ++ R+ +K++ +   Q+A +  A+ +++A    G    +S +   ++   +R
Sbjct: 729 GEKVRAALDRTRQLEKELQQLKAQQASQESASLSSKAVDVKGVKLLVSELS-NVEPKMLR 787

Query: 880 EAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCG 939
             V  +  Q G  V+V +T     K  + AGV    D + +++  E +    Q + G+ G
Sbjct: 788 TMVDDLKNQLGSTVIVLAT-VVDGKVSLIAGV--SGDLTGRVKAGELIGMVAQQVGGKGG 844

Query: 940 KGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
            G+  +A   GTDA  +  A+     + A KL
Sbjct: 845 -GRPDMAQAGGTDAQALPAALASVESWVAGKL 875


>gi|209694226|ref|YP_002262154.1| alanyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
 gi|208008177|emb|CAQ78320.1| alanyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
          Length = 860

 Score =  603 bits (1554), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 367/913 (40%), Positives = 520/913 (56%), Gaps = 85/913 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR  F  FFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG+     +    TR
Sbjct: 7   EVRRAFLAFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGS-----EKRSYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI++AWE LT+   L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKQDAIKYAWEFLTERLEL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFWEMGD 232
           PADRL  T +          D+EA +IW K +  PA R++  G         DNFW+MGD
Sbjct: 122 PADRLLVTIY--------ETDDEAFEIWNKEMGIPADRIVRIGDNKGAPYASDNFWQMGD 173

Query: 233 TGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           TGPCGPC+EI YD      G R        D    IEIWN VF+QFNR +DG+++PLP  
Sbjct: 174 TGPCGPCTEIFYDHGEHIWGGRPGTP--EEDGDRFIEIWNNVFMQFNRLADGTMEPLPKP 231

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ +I+Q   SNY+ D+F  +          +  +  VG DD    + + R
Sbjct: 232 SVDTGMGIERIAAIMQGVHSNYEIDIFQTLI---------KETAKVVGYDDLS--NQSLR 280

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           VVADHIR+ S+ I DG  P NEGR YVLRRI+RRAVR+G++ L A+  +F  LV  + ++
Sbjct: 281 VVADHIRSCSYLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAKGSYFYKLVGPLAEI 339

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    ELK+++A + +++  EE +FG+TL +G+    +A  +++G VL G+  F L+DT
Sbjct: 340 MGTAGEELKKQQALVEKVLKIEEENFGRTLERGMVILNEALDNLEGTVLDGETVFKLYDT 399

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP DLT  +A ER L +D +GF  AM+E R+R+R A      G    D +A   +   
Sbjct: 400 YGFPADLTNDVARERELTIDEDGFEKAMNEQRQRAREA------GQFGTDYNAVIKVESE 453

Query: 529 GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDE 588
            V    D      F + K+ +  I+   E +E++  G++  ++L  + FYAE GGQ  D 
Sbjct: 454 TVFHGYD------FTEAKATVLEIFCEGEAVETLSAGDDAILILDVTPFYAESGGQSGDA 507

Query: 589 GFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
           G I    G F V + Q  G  + H G L EG    S  +  + +VD +RR  I  NH+ T
Sbjct: 508 GIITVEAGKFVVTDTQKVGNAIGHHGKLVEGV--LSTADRAMAQVDEERRTAITLNHSAT 565

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+L+ ALR+VLG+HV QKGS+V  E LRFDFS+ + V PE LR +E IVN+Q++    + 
Sbjct: 566 HLLHAALRQVLGEHVTQKGSLVKAESLRFDFSNLEGVKPEELRLVERIVNQQVRLNHAIE 625

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
           +    +  AK   G  A+FGE Y D VRV+++G                  S ELCGG H
Sbjct: 626 TDLMDVDAAKE-KGAMALFGEKYDDEVRVLSMGE----------------FSTELCGGIH 668

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSL-EKEVDDASKIEGSLLE 827
            S+T +   F + SE GIA GIRRI AVT   A  A E+   L +K++ DAS  +  LLE
Sbjct: 669 ASSTGDIGLFKITSEGGIAAGIRRIEAVTGEAALDAIESQQKLADKKLHDASS-KTKLLE 727

Query: 828 KNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIE 887
           K ++++ + K+A +     +    + +      G    I++++ G D  A+R  V ++  
Sbjct: 728 K-EIQQLKDKLASQASSDLISQVQDIS------GVKVLITQLD-GADNKALRGMVDELKN 779

Query: 888 QKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLAS 947
           Q G  V++   + + +K  + AGV +  D   Q++  E +      + G+ G G+  +A 
Sbjct: 780 QIGSGVIMIG-NVSDDKVGLIAGVTK--DLIGQVKAGELVNMVALQVGGKGG-GRPDMAQ 835

Query: 948 GQGTDAAQVTPAM 960
             GTDA  +  A+
Sbjct: 836 AGGTDAKALPAAL 848


>gi|170019057|ref|YP_001724011.1| alanyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|205830085|sp|B1IUY2.1|SYA_ECOLC RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|169753985|gb|ACA76684.1| alanyl-tRNA synthetase [Escherichia coli ATCC 8739]
          Length = 876

 Score =  603 bits (1554), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 361/916 (39%), Positives = 514/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  K +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPANENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + ++++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   SF V + Q YG  + HIG L   AG   VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNTQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A G+RRI AVT   A     A      EV         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATVHADSDRLSEVAHLLKGDSNN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            A K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VVEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|404484999|ref|ZP_11020203.1| alanyl-tRNA synthetase [Barnesiella intestinihominis YIT 11860]
 gi|404340004|gb|EJZ66435.1| alanyl-tRNA synthetase [Barnesiella intestinihominis YIT 11860]
          Length = 872

 Score =  603 bits (1554), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 337/768 (43%), Positives = 450/768 (58%), Gaps = 67/768 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R++F  FF ++ H    S+P+V  +DPTL+F NAGMNQ+K I LG        +K 
Sbjct: 4   AKEIRESFKDFFRERGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNVP-----AKY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI+W+WE L  V 
Sbjct: 59  KRVADSQKCLRVSGKHNDLEEVGLDTYHHTMFEMLGNWSFGDYFKKEAIDWSWEYLVDVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           ++   RLYAT F G    GL  DNEA   W   LP   ++     DNFWEMGDTGPCGPC
Sbjct: 119 KIDPARLYATVFEGYASEGLERDNEAASYWEAHLPKDHIINGNRHDNFWEMGDTGPCGPC 178

Query: 240 SEIHYDRTGNR-----DAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D   +      D   LVN   P  IEIWN+VF+Q+NR++DGSL+PLPA+ +DTG+
Sbjct: 179 SEIHIDLRSDAERAEVDGLKLVNQSHPQVIEIWNLVFMQYNRKADGSLEPLPARVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF PI   I +  G +         D  KVD+A RV+ADHI
Sbjct: 239 GFERLCMALQGKTSNYDTDVFQPIIGEIGRLCGKK-------YGDDPKVDIAMRVIADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++F+I DG  P N    YV+RRILRRAVRYG   L  +  F   L++I+++ MGD +P
Sbjct: 292 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFLYKLLDILIETMGDAYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ--GKV-LSGQDAFILWDTYGF 471
           ELK ++  I ++I  EE +F +TL  GI+   K   D +  GK  +SG+DAF+L+DTYGF
Sbjct: 352 ELKAQKVLIGKVIKEEEDAFLRTLETGIKLLDKVTADTKAAGKSEISGRDAFVLYDTYGF 411

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+ +E+GL VDI+ FN  M + +ER+R+A   + G  +V+       +   G  
Sbjct: 412 PLDLTELILKEKGLGVDIDEFNAQMQQQKERARNAAAVETGDWVVLKEGEPEFV---GYD 468

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            T+   + + ++  K   +  Y                IVL  + FYAE GGQ+ D G +
Sbjct: 469 MTECDAEILRYRKVKQKAREFYQ---------------IVLDRTPFYAEMGGQVGDTGKL 513

Query: 592 EGLFGSFYVRNVQIY--GGFVIHIGS-LTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
             + G+  V  +Q        IHI   L E      V       +D + R+  A NHT T
Sbjct: 514 --ISGNDIVEILQTKRENNLSIHIAERLPE-----DVTATFHAVIDKEARRATACNHTAT 566

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+L+ ALREVLG HV+QKGS V P+ LRFDFSH + V  E LR++E I N +++  + + 
Sbjct: 567 HLLHEALREVLGTHVEQKGSYVSPQSLRFDFSHFQKVTDEELRKVEMIANRKVREAIPLD 626

Query: 709 S-KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGT 767
             +   +AEAK + G  A+FGE Y + VRV+  G                  S ELCGGT
Sbjct: 627 EHRNVPIAEAKAM-GAMALFGEKYGEEVRVIRFGS-----------------SVELCGGT 668

Query: 768 HLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV 815
           H+SNT       +++E  IA GIRRI A+T     +   A     KE+
Sbjct: 669 HVSNTGNIGMIKIITESSIAAGIRRIEAITGARVEETMNALQDSLKEI 716


>gi|432863774|ref|ZP_20087615.1| alanyl-tRNA synthetase [Escherichia coli KTE146]
 gi|431403639|gb|ELG86910.1| alanyl-tRNA synthetase [Escherichia coli KTE146]
          Length = 876

 Score =  603 bits (1554), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 361/916 (39%), Positives = 515/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  K +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + ++++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   SF V + Q YG  + HIG L   AG   VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMELEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A G+RRI AVT   A  +  A      EV         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIASVHADSDRLSEVAHLLKGDSNN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            A K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|417949416|ref|ZP_12592552.1| alanyl-tRNA synthetase [Vibrio splendidus ATCC 33789]
 gi|342808374|gb|EGU43534.1| alanyl-tRNA synthetase [Vibrio splendidus ATCC 33789]
          Length = 860

 Score =  602 bits (1553), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 368/914 (40%), Positives = 512/914 (56%), Gaps = 86/914 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR+ F KFFE K H    SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRNAFLKFFESKGHQIVDSSSLVPHNDPTLLFTNAGMNQFKDCFLGA-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT+  +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAITFAWEFLTETLQL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           P DRL  T +          D+EA DIW K   +PA R++  G K        DNFW MG
Sbjct: 122 PKDRLLVTVY--------ETDDEAFDIWNKKVGVPADRIVRIGDKEGGKKFESDNFWTMG 173

Query: 232 DTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
           DTGPCGPC+EI YD      G R        D    IEIWN VF+QFNR +DG+++PLP 
Sbjct: 174 DTGPCGPCTEIFYDHGEHIWGGRPGTP--EEDGDRFIEIWNNVFMQFNRHADGTMEPLPK 231

Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
             VDTG+G ER+++I+Q   SNY+ DVF  +  A  +  G    S           + + 
Sbjct: 232 PAVDTGMGIERISAIMQGVHSNYEIDVFQKLIKATAETIGYEDLS-----------NQSL 280

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RV+ADHIR+ SF IADG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF+ LV ++ +
Sbjct: 281 RVIADHIRSCSFLIADGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGVFFHKLVGVLAE 339

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWD 467
           VMG    ELK+++  + +++  EE +FG+TL +G+    +A   ++GK L G+  F L+D
Sbjct: 340 VMGSAADELKKQQELVEKVLRIEEENFGRTLERGMVILNEALDALEGKELDGETVFKLYD 399

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
           TYGFP DLT  +A ER   +D EGF  AM+  R+R+R A      G    D +AT  +  
Sbjct: 400 TYGFPADLTNDVARERDFTIDEEGFEKAMEVQRQRAREA------GQFGTDYNATIKVE- 452

Query: 528 RGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFD 587
                T+  F      +    I A++   E + S+  G++  I+L  + FYAE GGQ  D
Sbjct: 453 -----TNTEFCGYTGTEGAGEISALFVEGEEVASLSAGDKAIIILEETPFYAESGGQCGD 507

Query: 588 EGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTC 647
            G ++   G F V + Q  G    H G L EG   F+ G++V   VD +RR  I+ NH+ 
Sbjct: 508 TGTLKTASGLFKVEDTQKLGNAFAHHGELVEGV--FAKGDKVEATVDAERRAAISLNHSA 565

Query: 648 THMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDV 707
           TH+L+ ALREVLG+HV QKGS+V P+ LRFDFS+ + V PE L+ +E +VN Q++    +
Sbjct: 566 THLLHAALREVLGEHVAQKGSLVKPDNLRFDFSNLEAVTPEQLKEVERLVNAQVRKNHAI 625

Query: 708 FSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGT 767
            +    +  AK   G  A+FGE Y D VRV+++G                  S ELCGG 
Sbjct: 626 ETNIMDIESAKE-KGAMALFGEKYDDEVRVLSMG----------------DFSTELCGGI 668

Query: 768 HLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEA-ACSLEKEVDDASKIEGSLL 826
           H SNT +   F + SE GIA GIRRI AVT   A  A EA A + E+++ +++K   SL 
Sbjct: 669 HASNTGDIGLFKITSEGGIAAGIRRIEAVTGEAALDAVEAQANAYEEKLAESAKKAKSLE 728

Query: 827 EKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVI 886
           ++ Q+ K +   AE         A    +    +G    ++ +E G D   +R  V    
Sbjct: 729 KEIQLLKEKMAAAES--------ANIMGKVEEISGTKVLVAAIE-GADNKNLRTMVDNAK 779

Query: 887 EQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLA 946
            Q G  +++ + +    K  + AGV +  D   +++  + +    + + G+ G G+  +A
Sbjct: 780 NQVGSGIILIA-NVADGKVGLIAGVTK--DLIGKVKAGDLVKMVAEQVGGKGG-GRPDMA 835

Query: 947 SGQGTDAAQVTPAM 960
              GTD   +  A+
Sbjct: 836 QAGGTDVEALPEAL 849


>gi|422767798|ref|ZP_16821524.1| alanyl-tRNA synthetase [Escherichia coli E1520]
 gi|323935749|gb|EGB32063.1| alanyl-tRNA synthetase [Escherichia coli E1520]
          Length = 876

 Score =  602 bits (1553), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 361/916 (39%), Positives = 514/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  K +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYSSDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + ++++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   SF V + Q YG  + HIG L   AG   VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNTQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A G+RRI AVT   A     A      EV         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATVHADSDRLSEVAHLLKGDSNN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            A K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VVEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|15832808|ref|NP_311581.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|168749982|ref|ZP_02775004.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
 gi|168755438|ref|ZP_02780445.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
 gi|168762908|ref|ZP_02787915.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501]
 gi|168768784|ref|ZP_02793791.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|168774775|ref|ZP_02799782.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|168778675|ref|ZP_02803682.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|168800226|ref|ZP_02825233.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508]
 gi|194433071|ref|ZP_03065354.1| alanyl-tRNA synthetase [Shigella dysenteriae 1012]
 gi|195938445|ref|ZP_03083827.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4024]
 gi|208805868|ref|ZP_03248205.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208813761|ref|ZP_03255090.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208818286|ref|ZP_03258606.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209398791|ref|YP_002272160.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|217327497|ref|ZP_03443580.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|254794638|ref|YP_003079475.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|291284024|ref|YP_003500842.1| alanyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|387508049|ref|YP_006160305.1| alanyl-tRNA synthetase [Escherichia coli O55:H7 str. RM12579]
 gi|387883880|ref|YP_006314182.1| alanyl-tRNA synthetase [Escherichia coli Xuzhou21]
 gi|416776800|ref|ZP_11874834.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101]
 gi|416788228|ref|ZP_11879760.1| alanyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89]
 gi|416800193|ref|ZP_11884672.1| alanyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687]
 gi|416810758|ref|ZP_11889436.1| alanyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97]
 gi|416821473|ref|ZP_11894087.1| alanyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905]
 gi|416831835|ref|ZP_11899182.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61]
 gi|419087709|ref|ZP_13633062.1| alanyl-tRNA synthetase [Escherichia coli DEC4B]
 gi|419105221|ref|ZP_13650348.1| alanyl-tRNA synthetase [Escherichia coli DEC4E]
 gi|419127318|ref|ZP_13672196.1| alanyl-tRNA synthetase [Escherichia coli DEC5C]
 gi|425139672|ref|ZP_18540054.1| alanine--tRNA ligase [Escherichia coli 10.0833]
 gi|425238064|ref|ZP_18631784.1| alanine--tRNA ligase [Escherichia coli TT12B]
 gi|425295965|ref|ZP_18686161.1| alanine--tRNA ligase [Escherichia coli PA38]
 gi|425361679|ref|ZP_18747327.1| alanine--tRNA ligase [Escherichia coli EC1856]
 gi|428985045|ref|ZP_19054441.1| alanine--tRNA ligase [Escherichia coli 93.0055]
 gi|429074485|ref|ZP_19137738.1| alanine--tRNA ligase [Escherichia coli 99.0678]
 gi|445008407|ref|ZP_21324646.1| alanine--tRNA ligase [Escherichia coli PA47]
 gi|445013510|ref|ZP_21329617.1| alanine--tRNA ligase [Escherichia coli PA48]
 gi|445046493|ref|ZP_21361743.1| alanine--tRNA ligase [Escherichia coli 3.4880]
 gi|445057768|ref|ZP_21372626.1| alanine--tRNA ligase [Escherichia coli 99.0670]
 gi|452969481|ref|ZP_21967708.1| alanyl-tRNA ligase [Escherichia coli O157:H7 str. EC4009]
 gi|20532246|sp|Q8X3W8.2|SYA_ECO57 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|13363025|dbj|BAB36977.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|187769613|gb|EDU33457.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|188015823|gb|EDU53945.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
 gi|189003197|gb|EDU72183.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|189357241|gb|EDU75660.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
 gi|189362083|gb|EDU80502.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|189366853|gb|EDU85269.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501]
 gi|189377449|gb|EDU95865.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508]
 gi|194418798|gb|EDX34884.1| alanyl-tRNA synthetase [Shigella dysenteriae 1012]
 gi|208725669|gb|EDZ75270.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208735038|gb|EDZ83725.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208738409|gb|EDZ86091.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209160191|gb|ACI37624.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|217319864|gb|EEC28289.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|254594038|gb|ACT73399.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|290763897|gb|ADD57858.1| Alanyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|320640339|gb|EFX09878.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101]
 gi|320645886|gb|EFX14867.1| alanyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89]
 gi|320651186|gb|EFX19621.1| alanyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687]
 gi|320656736|gb|EFX24624.1| alanyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
 gi|320662279|gb|EFX29676.1| alanyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905]
 gi|320667330|gb|EFX34288.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61]
 gi|374360043|gb|AEZ41750.1| alanyl-tRNA synthetase [Escherichia coli O55:H7 str. RM12579]
 gi|377928983|gb|EHU92883.1| alanyl-tRNA synthetase [Escherichia coli DEC4B]
 gi|377946401|gb|EHV10081.1| alanyl-tRNA synthetase [Escherichia coli DEC4E]
 gi|377973037|gb|EHV36381.1| alanyl-tRNA synthetase [Escherichia coli DEC5C]
 gi|386797338|gb|AFJ30372.1| alanyl-tRNA synthetase [Escherichia coli Xuzhou21]
 gi|408153813|gb|EKH82183.1| alanine--tRNA ligase [Escherichia coli TT12B]
 gi|408216375|gb|EKI40703.1| alanine--tRNA ligase [Escherichia coli PA38]
 gi|408276030|gb|EKI95963.1| alanine--tRNA ligase [Escherichia coli EC1856]
 gi|408577740|gb|EKK53290.1| alanine--tRNA ligase [Escherichia coli 10.0833]
 gi|427240883|gb|EKW08329.1| alanine--tRNA ligase [Escherichia coli 93.0055]
 gi|427326959|gb|EKW88360.1| alanine--tRNA ligase [Escherichia coli 99.0678]
 gi|444622150|gb|ELV96114.1| alanine--tRNA ligase [Escherichia coli PA47]
 gi|444623119|gb|ELV97054.1| alanine--tRNA ligase [Escherichia coli PA48]
 gi|444658799|gb|ELW31236.1| alanine--tRNA ligase [Escherichia coli 3.4880]
 gi|444668923|gb|ELW40921.1| alanine--tRNA ligase [Escherichia coli 99.0670]
          Length = 876

 Score =  602 bits (1553), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 361/916 (39%), Positives = 514/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  K +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + ++++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   SF V + Q YG  + HIG L   AG   VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGANFSFVVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A G+RRI AVT   A     A      EV         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAITTVHADSDRLSEVAHLLKGDSNN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            A K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|293415946|ref|ZP_06658586.1| alanyl-tRNA synthetase [Escherichia coli B185]
 gi|331684309|ref|ZP_08384901.1| alanine--tRNA ligase [Escherichia coli H299]
 gi|422817812|ref|ZP_16866025.1| alanyl-tRNA synthetase [Escherichia coli M919]
 gi|432450826|ref|ZP_19693086.1| alanyl-tRNA synthetase [Escherichia coli KTE193]
 gi|432948665|ref|ZP_20143670.1| alanyl-tRNA synthetase [Escherichia coli KTE196]
 gi|433034510|ref|ZP_20222215.1| alanyl-tRNA synthetase [Escherichia coli KTE112]
 gi|433044222|ref|ZP_20231712.1| alanyl-tRNA synthetase [Escherichia coli KTE117]
 gi|450191795|ref|ZP_21891343.1| alanyl-tRNA ligase [Escherichia coli SEPT362]
 gi|291432135|gb|EFF05117.1| alanyl-tRNA synthetase [Escherichia coli B185]
 gi|331077924|gb|EGI49130.1| alanine--tRNA ligase [Escherichia coli H299]
 gi|385538325|gb|EIF85187.1| alanyl-tRNA synthetase [Escherichia coli M919]
 gi|430978760|gb|ELC95561.1| alanyl-tRNA synthetase [Escherichia coli KTE193]
 gi|431455944|gb|ELH36295.1| alanyl-tRNA synthetase [Escherichia coli KTE196]
 gi|431549148|gb|ELI23236.1| alanyl-tRNA synthetase [Escherichia coli KTE112]
 gi|431554917|gb|ELI28782.1| alanyl-tRNA synthetase [Escherichia coli KTE117]
 gi|449319042|gb|EMD09098.1| alanyl-tRNA ligase [Escherichia coli SEPT362]
          Length = 876

 Score =  602 bits (1553), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 361/916 (39%), Positives = 514/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  K +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + ++++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   SF V + Q YG  + HIG L   AG   VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGANFSFVVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A G+RRI AVT   A     A      EV         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATVHADSDRLSEVAHLLKGDSNN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            A K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|30064057|ref|NP_838228.1| alanyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|56480163|ref|NP_708505.2| alanyl-tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|110806677|ref|YP_690197.1| alanyl-tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|384544280|ref|YP_005728343.1| alanyl-tRNA synthetase [Shigella flexneri 2002017]
 gi|417703420|ref|ZP_12352526.1| alanyl-tRNA synthetase [Shigella flexneri K-218]
 gi|417724324|ref|ZP_12373126.1| alanyl-tRNA synthetase [Shigella flexneri K-304]
 gi|417734721|ref|ZP_12383369.1| alanyl-tRNA synthetase [Shigella flexneri 2747-71]
 gi|420332576|ref|ZP_14834226.1| alanyl-tRNA synthetase [Shigella flexneri K-1770]
 gi|424839065|ref|ZP_18263702.1| alanyl-tRNA synthetase [Shigella flexneri 5a str. M90T]
 gi|44888327|sp|Q7UBU3.1|SYA_SHIFL RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|123146773|sp|Q0T1C3.1|SYA_SHIF8 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|30042313|gb|AAP18038.1| alanyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|56383714|gb|AAN44212.2| alanyl-tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|110616225|gb|ABF04892.1| alanyl-tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|281602067|gb|ADA75051.1| Alanyl-tRNA synthetase [Shigella flexneri 2002017]
 gi|332755665|gb|EGJ86028.1| alanyl-tRNA synthetase [Shigella flexneri 2747-71]
 gi|333000647|gb|EGK20224.1| alanyl-tRNA synthetase [Shigella flexneri K-218]
 gi|333015876|gb|EGK35212.1| alanyl-tRNA synthetase [Shigella flexneri K-304]
 gi|383468117|gb|EID63138.1| alanyl-tRNA synthetase [Shigella flexneri 5a str. M90T]
 gi|391249407|gb|EIQ08642.1| alanyl-tRNA synthetase [Shigella flexneri K-1770]
          Length = 876

 Score =  602 bits (1553), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 360/916 (39%), Positives = 514/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  K +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + ++++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   SF V + Q YG  + HIG L   AG   VG+ V   +D  RR  I  NH
Sbjct: 507 GDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADIDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMNLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A G+RRI AVT   A     A      EV         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAITTVHADSDRLSEVAHLLKGDSNN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            A K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|344339101|ref|ZP_08770031.1| alanyl-tRNA synthetase [Thiocapsa marina 5811]
 gi|343801021|gb|EGV18965.1| alanyl-tRNA synthetase [Thiocapsa marina 5811]
          Length = 866

 Score =  602 bits (1553), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 363/919 (39%), Positives = 523/919 (56%), Gaps = 81/919 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R +F  +F  ++H    SSP+VP NDPTLLF NAGM Q+K +FLG      +    
Sbjct: 4   SAELRASFLDYFAQRDHERVPSSPLVPANDPTLLFTNAGMVQFKEVFLGR-----ERRAY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            RA ++Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK EAI +AW+ LT+V 
Sbjct: 59  NRAVSSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIAFAWDYLTRVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFGCKDNFWEMGDTGPCG 237
            LP +RL+ T +          D+EA DIWLK +   ASR    G KDNFW MG+TGPCG
Sbjct: 119 ALPPERLWITVY--------TEDDEAADIWLKEIGADASRFSRCGAKDNFWSMGETGPCG 170

Query: 238 PCSEIHYDR--TGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           PCSEI YD             + D    +EIWN+VF+Q+NR+++G+L PLP   VDTG+G
Sbjct: 171 PCSEIFYDHGPEIPGGPPGSPDEDGDRYVEIWNLVFMQYNRDAEGNLTPLPRPSVDTGMG 230

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
            ERL +++Q   SNY+ D+F+ + DA  +ATG            AD+ + + RV+ADHIR
Sbjct: 231 LERLAAVMQGVHSNYEIDLFVRLIDAAARATGC-----------ADRENKSLRVIADHIR 279

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPE 415
           + +F I DG  PGNEGR YVLRRI+RRA+R+G + L     FF+ LV  +V  MG  +PE
Sbjct: 280 SAAFLITDGVTPGNEGRGYVLRRIMRRAIRHGYQ-LGCTTPFFHRLVPALVAEMGAAYPE 338

Query: 416 LKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDL 475
           L     H+  II  EE  F +TL  G+    +A   +    + G+  F L+DTYGFP DL
Sbjct: 339 LVASHEHVERIILLEEERFAETLEHGMRLLDEAIAGLGDTRIPGETVFKLYDTYGFPTDL 398

Query: 476 TQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDD 535
           T  +A ERGL +D++GF  AM + RER+R+A   Q GG   ++ D               
Sbjct: 399 TADIARERGLALDMDGFEQAMAQQRERARAA--SQFGGPAGLEIDVKG------------ 444

Query: 536 SFKFIWFQD-HKSV-IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEG 593
             +F  ++  H+ V + A+Y+     + +  G E  +VL  + FYAE GGQ+ D G++ G
Sbjct: 445 ETEFCGYERLHEEVTVVALYSARGSCDQLAAGEEGLVVLDLTPFYAESGGQVGDRGWLLG 504

Query: 594 LFGSFYVRNVQIYG-GFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLN 652
             G F V + Q  G G V H+G + EG    +VG+ V  +VD  RR+  A NH+ TH+L+
Sbjct: 505 EGGRFEVLDTQKKGEGAVGHLGRVAEGI--LAVGDRVEARVDGSRRRATALNHSATHLLH 562

Query: 653 FALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEA 712
            ALR VLG+HV QKGS+V PE+LRFDFSH + V  E +  IE +VN +++    V ++  
Sbjct: 563 AALRRVLGEHVQQKGSLVGPERLRFDFSHYEAVSREQVLEIERMVNREVRENHLVETRIM 622

Query: 713 TLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNT 772
           +L +AK  +G  A+FGE Y D VRV+ +G                  S ELCGGTH+   
Sbjct: 623 SLDDAKA-SGAMALFGEKYSDQVRVLRMG----------------DFSTELCGGTHVKAV 665

Query: 773 REAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEA--------ACSLEKEVDDASKIEGS 824
            +     ++ E GIA G+RRI AVT   A    EA        A  L+   +D  +    
Sbjct: 666 GDIGLVKIIGESGIASGVRRIEAVTGAGALDWIEADEDRLIRTAGLLKGGREDVDQRVLQ 725

Query: 825 LLEKNQVRKAQKKVAEENLQKAVKVATETA-EAAASNGKPFCISRVEVGLDAAAVREAVL 883
           LLE++  R+ +K++ +   + A     + A +A   +G     +R+E G D+ A+R  + 
Sbjct: 726 LLERS--RRLEKELEQLKAKLASSAGQDLASQAVVIDGIKVLAARLE-GADSKALRVTLD 782

Query: 884 KVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKG 943
           ++ ++ G  V+V +T E   K  + AGV +  D + +L+  + +    + + G+ G G+ 
Sbjct: 783 QLKDKLGSAVVVLAT-EGDGKVSLIAGVTK--DLTDRLKAGDLIRELAEKVGGK-GGGRP 838

Query: 944 GLASGQGTDAAQVTPAMDL 962
            +A   G D A +  A+ L
Sbjct: 839 DMAQAGGNDPAGLPAALAL 857


>gi|218706191|ref|YP_002413710.1| alanyl-tRNA synthetase [Escherichia coli UMN026]
 gi|293406188|ref|ZP_06650114.1| alaS [Escherichia coli FVEC1412]
 gi|298381926|ref|ZP_06991523.1| alanyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|331664248|ref|ZP_08365154.1| alanine--tRNA ligase [Escherichia coli TA143]
 gi|387608333|ref|YP_006097189.1| alanyl-tRNA synthetase [Escherichia coli 042]
 gi|417587703|ref|ZP_12238469.1| alanyl-tRNA synthetase [Escherichia coli STEC_C165-02]
 gi|419934472|ref|ZP_14451580.1| alanyl-tRNA synthetase [Escherichia coli 576-1]
 gi|432354602|ref|ZP_19597871.1| alanyl-tRNA synthetase [Escherichia coli KTE2]
 gi|432402951|ref|ZP_19645701.1| alanyl-tRNA synthetase [Escherichia coli KTE26]
 gi|432427221|ref|ZP_19669714.1| alanyl-tRNA synthetase [Escherichia coli KTE181]
 gi|432461682|ref|ZP_19703826.1| alanyl-tRNA synthetase [Escherichia coli KTE204]
 gi|432476910|ref|ZP_19718904.1| alanyl-tRNA synthetase [Escherichia coli KTE208]
 gi|432490498|ref|ZP_19732365.1| alanyl-tRNA synthetase [Escherichia coli KTE213]
 gi|432518779|ref|ZP_19755963.1| alanyl-tRNA synthetase [Escherichia coli KTE228]
 gi|432538949|ref|ZP_19775848.1| alanyl-tRNA synthetase [Escherichia coli KTE235]
 gi|432632447|ref|ZP_19868370.1| alanyl-tRNA synthetase [Escherichia coli KTE80]
 gi|432642159|ref|ZP_19877989.1| alanyl-tRNA synthetase [Escherichia coli KTE83]
 gi|432667153|ref|ZP_19902731.1| alanyl-tRNA synthetase [Escherichia coli KTE116]
 gi|432771610|ref|ZP_20005932.1| alanyl-tRNA synthetase [Escherichia coli KTE50]
 gi|432775737|ref|ZP_20010004.1| alanyl-tRNA synthetase [Escherichia coli KTE54]
 gi|432840522|ref|ZP_20073985.1| alanyl-tRNA synthetase [Escherichia coli KTE140]
 gi|432887785|ref|ZP_20101713.1| alanyl-tRNA synthetase [Escherichia coli KTE158]
 gi|432913949|ref|ZP_20119534.1| alanyl-tRNA synthetase [Escherichia coli KTE190]
 gi|432963033|ref|ZP_20152452.1| alanyl-tRNA synthetase [Escherichia coli KTE202]
 gi|433019766|ref|ZP_20207946.1| alanyl-tRNA synthetase [Escherichia coli KTE105]
 gi|433054329|ref|ZP_20241499.1| alanyl-tRNA synthetase [Escherichia coli KTE122]
 gi|433064100|ref|ZP_20251014.1| alanyl-tRNA synthetase [Escherichia coli KTE125]
 gi|433068976|ref|ZP_20255757.1| alanyl-tRNA synthetase [Escherichia coli KTE128]
 gi|433159714|ref|ZP_20344545.1| alanyl-tRNA synthetase [Escherichia coli KTE177]
 gi|433179518|ref|ZP_20363909.1| alanyl-tRNA synthetase [Escherichia coli KTE82]
 gi|433204404|ref|ZP_20388165.1| alanyl-tRNA synthetase [Escherichia coli KTE95]
 gi|218433288|emb|CAR14188.1| alanyl-tRNA synthetase [Escherichia coli UMN026]
 gi|284922633|emb|CBG35721.1| alanyl-tRNA synthetase [Escherichia coli 042]
 gi|291426194|gb|EFE99226.1| alaS [Escherichia coli FVEC1412]
 gi|298277066|gb|EFI18582.1| alanyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|331058179|gb|EGI30160.1| alanine--tRNA ligase [Escherichia coli TA143]
 gi|345334038|gb|EGW66483.1| alanyl-tRNA synthetase [Escherichia coli STEC_C165-02]
 gi|388407875|gb|EIL68236.1| alanyl-tRNA synthetase [Escherichia coli 576-1]
 gi|430873510|gb|ELB97076.1| alanyl-tRNA synthetase [Escherichia coli KTE2]
 gi|430924542|gb|ELC45254.1| alanyl-tRNA synthetase [Escherichia coli KTE26]
 gi|430954257|gb|ELC73136.1| alanyl-tRNA synthetase [Escherichia coli KTE181]
 gi|430987956|gb|ELD04469.1| alanyl-tRNA synthetase [Escherichia coli KTE204]
 gi|431004060|gb|ELD19292.1| alanyl-tRNA synthetase [Escherichia coli KTE208]
 gi|431019199|gb|ELD32606.1| alanyl-tRNA synthetase [Escherichia coli KTE213]
 gi|431049812|gb|ELD59690.1| alanyl-tRNA synthetase [Escherichia coli KTE228]
 gi|431068327|gb|ELD76808.1| alanyl-tRNA synthetase [Escherichia coli KTE235]
 gi|431169012|gb|ELE69243.1| alanyl-tRNA synthetase [Escherichia coli KTE80]
 gi|431180114|gb|ELE80002.1| alanyl-tRNA synthetase [Escherichia coli KTE83]
 gi|431199565|gb|ELE98313.1| alanyl-tRNA synthetase [Escherichia coli KTE116]
 gi|431313615|gb|ELG01585.1| alanyl-tRNA synthetase [Escherichia coli KTE50]
 gi|431316994|gb|ELG04780.1| alanyl-tRNA synthetase [Escherichia coli KTE54]
 gi|431387825|gb|ELG71637.1| alanyl-tRNA synthetase [Escherichia coli KTE140]
 gi|431415263|gb|ELG97808.1| alanyl-tRNA synthetase [Escherichia coli KTE158]
 gi|431437896|gb|ELH19402.1| alanyl-tRNA synthetase [Escherichia coli KTE190]
 gi|431471608|gb|ELH51500.1| alanyl-tRNA synthetase [Escherichia coli KTE202]
 gi|431529378|gb|ELI06079.1| alanyl-tRNA synthetase [Escherichia coli KTE105]
 gi|431569127|gb|ELI42088.1| alanyl-tRNA synthetase [Escherichia coli KTE122]
 gi|431579987|gb|ELI52557.1| alanyl-tRNA synthetase [Escherichia coli KTE125]
 gi|431581869|gb|ELI54310.1| alanyl-tRNA synthetase [Escherichia coli KTE128]
 gi|431676099|gb|ELJ42222.1| alanyl-tRNA synthetase [Escherichia coli KTE177]
 gi|431699632|gb|ELJ64630.1| alanyl-tRNA synthetase [Escherichia coli KTE82]
 gi|431719100|gb|ELJ83161.1| alanyl-tRNA synthetase [Escherichia coli KTE95]
          Length = 876

 Score =  602 bits (1553), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 361/916 (39%), Positives = 514/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  K +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + ++++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   SF V + Q YG  + HIG L   AG   VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGTNFSFAVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A G+RRI AVT   A     A      EV         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATVHADSDRLSEVAHLLKGDSNN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            A K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VVEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|157162143|ref|YP_001459461.1| alanyl-tRNA synthetase [Escherichia coli HS]
 gi|218690819|ref|YP_002399031.1| alanyl-tRNA synthetase [Escherichia coli ED1a]
 gi|227888232|ref|ZP_04006037.1| alanyl-tRNA synthetase [Escherichia coli 83972]
 gi|331658802|ref|ZP_08359744.1| alanine--tRNA ligase [Escherichia coli TA206]
 gi|386630430|ref|YP_006150150.1| alanyl-tRNA synthetase [Escherichia coli str. 'clone D i2']
 gi|386635350|ref|YP_006155069.1| alanyl-tRNA synthetase [Escherichia coli str. 'clone D i14']
 gi|386640179|ref|YP_006106977.1| alanyl-tRNA synthetase [Escherichia coli ABU 83972]
 gi|419920193|ref|ZP_14438319.1| alanyl-tRNA synthetase [Escherichia coli KD2]
 gi|432366153|ref|ZP_19609272.1| alanyl-tRNA synthetase [Escherichia coli KTE10]
 gi|432412821|ref|ZP_19655481.1| alanyl-tRNA synthetase [Escherichia coli KTE39]
 gi|432432896|ref|ZP_19675321.1| alanyl-tRNA synthetase [Escherichia coli KTE187]
 gi|432437378|ref|ZP_19679765.1| alanyl-tRNA synthetase [Escherichia coli KTE188]
 gi|432457719|ref|ZP_19699899.1| alanyl-tRNA synthetase [Escherichia coli KTE201]
 gi|432486447|ref|ZP_19728360.1| alanyl-tRNA synthetase [Escherichia coli KTE212]
 gi|432496714|ref|ZP_19738509.1| alanyl-tRNA synthetase [Escherichia coli KTE214]
 gi|432505458|ref|ZP_19747179.1| alanyl-tRNA synthetase [Escherichia coli KTE220]
 gi|432524852|ref|ZP_19761977.1| alanyl-tRNA synthetase [Escherichia coli KTE230]
 gi|432527460|ref|ZP_19764548.1| alanyl-tRNA synthetase [Escherichia coli KTE233]
 gi|432554714|ref|ZP_19791433.1| alanyl-tRNA synthetase [Escherichia coli KTE47]
 gi|432569740|ref|ZP_19806249.1| alanyl-tRNA synthetase [Escherichia coli KTE53]
 gi|432582227|ref|ZP_19818641.1| alanyl-tRNA synthetase [Escherichia coli KTE57]
 gi|432593873|ref|ZP_19830186.1| alanyl-tRNA synthetase [Escherichia coli KTE60]
 gi|432608540|ref|ZP_19844723.1| alanyl-tRNA synthetase [Escherichia coli KTE67]
 gi|432652181|ref|ZP_19887932.1| alanyl-tRNA synthetase [Escherichia coli KTE87]
 gi|432671768|ref|ZP_19907295.1| alanyl-tRNA synthetase [Escherichia coli KTE119]
 gi|432733438|ref|ZP_19968264.1| alanyl-tRNA synthetase [Escherichia coli KTE45]
 gi|432751108|ref|ZP_19985708.1| alanyl-tRNA synthetase [Escherichia coli KTE29]
 gi|432760524|ref|ZP_19995015.1| alanyl-tRNA synthetase [Escherichia coli KTE46]
 gi|432784571|ref|ZP_20018749.1| alanyl-tRNA synthetase [Escherichia coli KTE63]
 gi|432845673|ref|ZP_20078407.1| alanyl-tRNA synthetase [Escherichia coli KTE141]
 gi|432853822|ref|ZP_20082367.1| alanyl-tRNA synthetase [Escherichia coli KTE144]
 gi|432899801|ref|ZP_20110311.1| alanyl-tRNA synthetase [Escherichia coli KTE192]
 gi|432974808|ref|ZP_20163643.1| alanyl-tRNA synthetase [Escherichia coli KTE209]
 gi|432996363|ref|ZP_20184947.1| alanyl-tRNA synthetase [Escherichia coli KTE218]
 gi|433000934|ref|ZP_20189456.1| alanyl-tRNA synthetase [Escherichia coli KTE223]
 gi|433029584|ref|ZP_20217438.1| alanyl-tRNA synthetase [Escherichia coli KTE109]
 gi|433059142|ref|ZP_20246182.1| alanyl-tRNA synthetase [Escherichia coli KTE124]
 gi|433088341|ref|ZP_20274708.1| alanyl-tRNA synthetase [Escherichia coli KTE137]
 gi|433116546|ref|ZP_20302333.1| alanyl-tRNA synthetase [Escherichia coli KTE153]
 gi|433121223|ref|ZP_20306889.1| alanyl-tRNA synthetase [Escherichia coli KTE157]
 gi|433126216|ref|ZP_20311769.1| alanyl-tRNA synthetase [Escherichia coli KTE160]
 gi|433140284|ref|ZP_20325535.1| alanyl-tRNA synthetase [Escherichia coli KTE167]
 gi|433150203|ref|ZP_20335218.1| alanyl-tRNA synthetase [Escherichia coli KTE174]
 gi|433174570|ref|ZP_20359087.1| alanyl-tRNA synthetase [Escherichia coli KTE232]
 gi|433208780|ref|ZP_20392452.1| alanyl-tRNA synthetase [Escherichia coli KTE97]
 gi|433213564|ref|ZP_20397152.1| alanyl-tRNA synthetase [Escherichia coli KTE99]
 gi|442603568|ref|ZP_21018439.1| Alanyl-tRNA synthetase [Escherichia coli Nissle 1917]
 gi|205830083|sp|A8A3H4.1|SYA_ECOHS RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|157067823|gb|ABV07078.1| alanyl-tRNA synthetase [Escherichia coli HS]
 gi|218428383|emb|CAR09311.2| alanyl-tRNA synthetase [Escherichia coli ED1a]
 gi|227834501|gb|EEJ44967.1| alanyl-tRNA synthetase [Escherichia coli 83972]
 gi|307554671|gb|ADN47446.1| alanyl-tRNA synthetase [Escherichia coli ABU 83972]
 gi|331053384|gb|EGI25413.1| alanine--tRNA ligase [Escherichia coli TA206]
 gi|355421329|gb|AER85526.1| alanyl-tRNA synthetase [Escherichia coli str. 'clone D i2']
 gi|355426249|gb|AER90445.1| alanyl-tRNA synthetase [Escherichia coli str. 'clone D i14']
 gi|388385430|gb|EIL47113.1| alanyl-tRNA synthetase [Escherichia coli KD2]
 gi|430892424|gb|ELC14915.1| alanyl-tRNA synthetase [Escherichia coli KTE10]
 gi|430934281|gb|ELC54648.1| alanyl-tRNA synthetase [Escherichia coli KTE39]
 gi|430951078|gb|ELC70298.1| alanyl-tRNA synthetase [Escherichia coli KTE187]
 gi|430961551|gb|ELC79558.1| alanyl-tRNA synthetase [Escherichia coli KTE188]
 gi|430981004|gb|ELC97744.1| alanyl-tRNA synthetase [Escherichia coli KTE201]
 gi|431014970|gb|ELD28534.1| alanyl-tRNA synthetase [Escherichia coli KTE212]
 gi|431022407|gb|ELD35668.1| alanyl-tRNA synthetase [Escherichia coli KTE214]
 gi|431036974|gb|ELD47962.1| alanyl-tRNA synthetase [Escherichia coli KTE220]
 gi|431050526|gb|ELD60271.1| alanyl-tRNA synthetase [Escherichia coli KTE230]
 gi|431062276|gb|ELD71549.1| alanyl-tRNA synthetase [Escherichia coli KTE233]
 gi|431082065|gb|ELD88379.1| alanyl-tRNA synthetase [Escherichia coli KTE47]
 gi|431098832|gb|ELE04138.1| alanyl-tRNA synthetase [Escherichia coli KTE53]
 gi|431122509|gb|ELE25378.1| alanyl-tRNA synthetase [Escherichia coli KTE57]
 gi|431126275|gb|ELE28622.1| alanyl-tRNA synthetase [Escherichia coli KTE60]
 gi|431136619|gb|ELE38475.1| alanyl-tRNA synthetase [Escherichia coli KTE67]
 gi|431189281|gb|ELE88704.1| alanyl-tRNA synthetase [Escherichia coli KTE87]
 gi|431209447|gb|ELF07554.1| alanyl-tRNA synthetase [Escherichia coli KTE119]
 gi|431273204|gb|ELF64290.1| alanyl-tRNA synthetase [Escherichia coli KTE45]
 gi|431295602|gb|ELF85339.1| alanyl-tRNA synthetase [Escherichia coli KTE29]
 gi|431306764|gb|ELF95069.1| alanyl-tRNA synthetase [Escherichia coli KTE46]
 gi|431327728|gb|ELG15048.1| alanyl-tRNA synthetase [Escherichia coli KTE63]
 gi|431393849|gb|ELG77395.1| alanyl-tRNA synthetase [Escherichia coli KTE141]
 gi|431398237|gb|ELG81657.1| alanyl-tRNA synthetase [Escherichia coli KTE144]
 gi|431424941|gb|ELH07016.1| alanyl-tRNA synthetase [Escherichia coli KTE192]
 gi|431486874|gb|ELH66519.1| alanyl-tRNA synthetase [Escherichia coli KTE209]
 gi|431503907|gb|ELH82639.1| alanyl-tRNA synthetase [Escherichia coli KTE218]
 gi|431507444|gb|ELH85729.1| alanyl-tRNA synthetase [Escherichia coli KTE223]
 gi|431542133|gb|ELI17372.1| alanyl-tRNA synthetase [Escherichia coli KTE109]
 gi|431567784|gb|ELI40776.1| alanyl-tRNA synthetase [Escherichia coli KTE124]
 gi|431603357|gb|ELI72782.1| alanyl-tRNA synthetase [Escherichia coli KTE137]
 gi|431632562|gb|ELJ00849.1| alanyl-tRNA synthetase [Escherichia coli KTE153]
 gi|431641056|gb|ELJ08800.1| alanyl-tRNA synthetase [Escherichia coli KTE157]
 gi|431642967|gb|ELJ10671.1| alanyl-tRNA synthetase [Escherichia coli KTE160]
 gi|431658631|gb|ELJ25542.1| alanyl-tRNA synthetase [Escherichia coli KTE167]
 gi|431669435|gb|ELJ35858.1| alanyl-tRNA synthetase [Escherichia coli KTE174]
 gi|431690632|gb|ELJ56108.1| alanyl-tRNA synthetase [Escherichia coli KTE232]
 gi|431729228|gb|ELJ92863.1| alanyl-tRNA synthetase [Escherichia coli KTE97]
 gi|431733477|gb|ELJ96912.1| alanyl-tRNA synthetase [Escherichia coli KTE99]
 gi|441715613|emb|CCQ04416.1| Alanyl-tRNA synthetase [Escherichia coli Nissle 1917]
          Length = 876

 Score =  602 bits (1553), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 361/916 (39%), Positives = 514/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  K +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + ++++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   SF V + Q YG  + HIG L   AG   VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A G+RRI AVT   A     A      EV         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATVHADSDRLSEVAHLLKGDSNN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            A K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|422807902|ref|ZP_16856330.1| alanyl-tRNA synthetase [Escherichia fergusonii B253]
 gi|324111325|gb|EGC05307.1| alanyl-tRNA synthetase [Escherichia fergusonii B253]
          Length = 876

 Score =  602 bits (1553), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 361/916 (39%), Positives = 514/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  K +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + ++++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELSGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   SF V + Q YG  + HIG L   AG   VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A G+RRI AVT   A     A      EV         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATVHADSDRLSEVAHLLKGDSNN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            A K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|419939838|ref|ZP_14456622.1| alanyl-tRNA synthetase [Escherichia coli 75]
 gi|388406212|gb|EIL66619.1| alanyl-tRNA synthetase [Escherichia coli 75]
          Length = 876

 Score =  602 bits (1553), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 361/916 (39%), Positives = 514/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  K +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIGV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + ++++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   SF V + Q YG  + HIG L   AG   VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNTQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A G+RRI AVT   A     A      EV         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATVHADSDRLSEVAHLLKGDSNN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            A K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VVEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|402830906|ref|ZP_10879600.1| alanine--tRNA ligase [Capnocytophaga sp. CM59]
 gi|402283340|gb|EJU31858.1| alanine--tRNA ligase [Capnocytophaga sp. CM59]
          Length = 877

 Score =  602 bits (1553), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 351/877 (40%), Positives = 500/877 (57%), Gaps = 60/877 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F KFFE K H    S+P+V  NDPTL+F NAGMNQ+K  FLG A P     K 
Sbjct: 3   SQEIRELFLKFFESKGHTIVPSAPMVIKNDPTLMFTNAGMNQFKEFFLGNAKP-----KY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  +TQKC+R  GKHNDL++VG+DTYHHT FEMLGNWSFGDYFK EAI WAWELLT+VY
Sbjct: 58  KRVVDTQKCLRVSGKHNDLEEVGRDTYHHTMFEMLGNWSFGDYFKREAISWAWELLTEVY 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           ++P + LY T F G  + G+  D EA DIW + +    +L    KDNFWEMGD GPCGPC
Sbjct: 118 KIPKENLYVTVFEGSPEEGVPFDQEAYDIWKERIAEDHILLGNKKDNFWEMGDQGPCGPC 177

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + A      LVNND P  IEIWN VF++FNR++DGSL+ LPA++VDTG+
Sbjct: 178 SEIHVDIRSEEEKAKVAGRDLVNNDHPQVIEIWNNVFMEFNRKADGSLEKLPAQNVDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL  +LQ K SNYDTDVF P+   +++ T  +  +G     + +++++A RV++DHI
Sbjct: 238 GFERLCMVLQGKQSNYDTDVFTPLIHKVEEITKTKYTNGIKVTPEQEQINVAIRVISDHI 297

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R ++FAIADG  P N G  YV+RRILRRA+RYG   L  ++ F   LV  + K MG  F 
Sbjct: 298 RAVAFAIADGQLPSNNGAGYVIRRILRRAIRYGFTFLGQKEPFIYKLVETLAKQMGGTFH 357

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLD 474
           EL++    I  +I  EEASF +TL +G+       Q+   K LSG  AF L+DTYGFP D
Sbjct: 358 ELEKEFLLIVSVIKEEEASFLRTLEQGLLMLDVMIQNTTDKQLSGSKAFELYDTYGFPKD 417

Query: 475 LTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATD 534
           LT L+  ERG+ +D   F   + + +ERSR+A   +AG  +              VL  D
Sbjct: 418 LTALILSERGMTLDEASFEEHLQKQKERSRAAAQVKAGDWV--------------VLRDD 463

Query: 535 DSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGL 594
           +  +F+ +   ++V++ +      +ES   G    +V  ++ FY E GGQ+ D G ++  
Sbjct: 464 EEEEFVGYDTLEAVVRLVKYRK--VESQKDGTLYQLVFNTTPFYPEGGGQVGDRGTLQSA 521

Query: 595 FGS-FYVRNVQIYGGFVIHIGS-LTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLN 652
            G   Y+ + +     +IH+   L E     ++ +    +V    R L   NH+ TH+L+
Sbjct: 522 NGEIIYIIDTKKENNLIIHLAEHLPE-----NLTDPFKAEVHLAGRTLAQANHSATHLLH 576

Query: 653 FALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEA 712
            ALREVLG HV+QKGS V PE LRFDFSH   +  E L  +E +VN++I  ++ +     
Sbjct: 577 QALREVLGTHVEQKGSHVSPEALRFDFSHFAKLTQEELTEVERLVNKRIYEKIPLQEHRN 636

Query: 713 TLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNT 772
              +     G  A+FGE Y D VR++  G                  S ELCGGTH+ NT
Sbjct: 637 IPIQQALEAGAMALFGEKYGDKVRMIQFGE-----------------SRELCGGTHVKNT 679

Query: 773 REAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV-------DDASKIEGSL 825
            +   F ++SE  +A G+RRI A+T   A K F     L +EV        D  K   +L
Sbjct: 680 GDIWFFKIVSEGAVAAGVRRIEAITNAGALKHFLLQEKLLEEVKSSLKNPQDPVKAIANL 739

Query: 826 LEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKV 885
            E+N   +  K++ +   ++A ++  E        G   C+S+  + LD A +++    +
Sbjct: 740 QEENA--RLHKELEQLKREQAKQLKGELKGEFVPVGDVQCLSK-RLDLDLATLKDLAFML 796

Query: 886 IEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLE 922
            E+     ++F + +   KA++   + ++  ++K L+
Sbjct: 797 GEEVKDAFILFGSAQEDGKALLLCYINKELAKNKGLD 833


>gi|16130604|ref|NP_417177.1| alanyl-tRNA synthetase [Escherichia coli str. K-12 substr. MG1655]
 gi|170082274|ref|YP_001731594.1| alanyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B]
 gi|188492036|ref|ZP_02999306.1| alanyl-tRNA synthetase [Escherichia coli 53638]
 gi|194439000|ref|ZP_03071084.1| alanyl-tRNA synthetase [Escherichia coli 101-1]
 gi|238901834|ref|YP_002927630.1| alanyl-tRNA synthetase [Escherichia coli BW2952]
 gi|331643380|ref|ZP_08344511.1| alanine--tRNA ligase [Escherichia coli H736]
 gi|386281742|ref|ZP_10059401.1| alanyl-tRNA synthetase [Escherichia sp. 4_1_40B]
 gi|386594564|ref|YP_006090964.1| alanyl-tRNA synthetase [Escherichia coli DH1]
 gi|387613320|ref|YP_006116436.1| alanyl-tRNA synthetase [Escherichia coli ETEC H10407]
 gi|387622380|ref|YP_006130008.1| alanyl-tRNA synthetase [Escherichia coli DH1]
 gi|388478714|ref|YP_490906.1| alanyl-tRNA synthetase [Escherichia coli str. K-12 substr. W3110]
 gi|404376001|ref|ZP_10981177.1| alanyl-tRNA synthetase [Escherichia sp. 1_1_43]
 gi|417262406|ref|ZP_12049880.1| alanine--tRNA ligase [Escherichia coli 2.3916]
 gi|417291559|ref|ZP_12078840.1| alanine--tRNA ligase [Escherichia coli B41]
 gi|417614142|ref|ZP_12264599.1| alanyl-tRNA synthetase [Escherichia coli STEC_EH250]
 gi|417944071|ref|ZP_12587316.1| alanyl-tRNA synthetase [Escherichia coli XH140A]
 gi|417975531|ref|ZP_12616329.1| alanyl-tRNA synthetase [Escherichia coli XH001]
 gi|419165463|ref|ZP_13709917.1| alanyl-tRNA synthetase [Escherichia coli DEC6E]
 gi|419812892|ref|ZP_14337753.1| alanyl-tRNA synthetase [Escherichia coli O32:H37 str. P4]
 gi|422771440|ref|ZP_16825130.1| alanyl-tRNA synthetase [Escherichia coli E482]
 gi|422787779|ref|ZP_16840517.1| alanyl-tRNA synthetase [Escherichia coli H489]
 gi|422791999|ref|ZP_16844701.1| alanyl-tRNA synthetase [Escherichia coli TA007]
 gi|423703968|ref|ZP_17678393.1| alanyl-tRNA synthetase [Escherichia coli H730]
 gi|432418138|ref|ZP_19660735.1| alanyl-tRNA synthetase [Escherichia coli KTE44]
 gi|432564951|ref|ZP_19801527.1| alanyl-tRNA synthetase [Escherichia coli KTE51]
 gi|432576923|ref|ZP_19813378.1| alanyl-tRNA synthetase [Escherichia coli KTE56]
 gi|432628326|ref|ZP_19864299.1| alanyl-tRNA synthetase [Escherichia coli KTE77]
 gi|432637908|ref|ZP_19873775.1| alanyl-tRNA synthetase [Escherichia coli KTE81]
 gi|432661893|ref|ZP_19897532.1| alanyl-tRNA synthetase [Escherichia coli KTE111]
 gi|432686503|ref|ZP_19921796.1| alanyl-tRNA synthetase [Escherichia coli KTE156]
 gi|432687895|ref|ZP_19923175.1| alanyl-tRNA synthetase [Escherichia coli KTE161]
 gi|432705449|ref|ZP_19940547.1| alanyl-tRNA synthetase [Escherichia coli KTE171]
 gi|432738147|ref|ZP_19972902.1| alanyl-tRNA synthetase [Escherichia coli KTE42]
 gi|432876549|ref|ZP_20094467.1| alanyl-tRNA synthetase [Escherichia coli KTE154]
 gi|432956322|ref|ZP_20148049.1| alanyl-tRNA synthetase [Escherichia coli KTE197]
 gi|433049076|ref|ZP_20236419.1| alanyl-tRNA synthetase [Escherichia coli KTE120]
 gi|442595090|ref|ZP_21012954.1| Alanyl-tRNA synthetase [Escherichia coli O10:K5(L):H4 str. ATCC
           23506]
 gi|442598432|ref|ZP_21016200.1| Alanyl-tRNA synthetase [Escherichia coli O5:K4(L):H4 str. ATCC
           23502]
 gi|450247469|ref|ZP_21901170.1| alanyl-tRNA ligase [Escherichia coli S17]
 gi|2507425|sp|P00957.2|SYA_ECOLI RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|205830082|sp|B1XCM5.1|SYA_ECODH RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|1789048|gb|AAC75739.1| alanyl-tRNA synthetase [Escherichia coli str. K-12 substr. MG1655]
 gi|1800083|dbj|BAA16559.1| alanyl-tRNA synthetase [Escherichia coli str. K12 substr. W3110]
 gi|169890109|gb|ACB03816.1| alanyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B]
 gi|188487235|gb|EDU62338.1| alanyl-tRNA synthetase [Escherichia coli 53638]
 gi|194422121|gb|EDX38124.1| alanyl-tRNA synthetase [Escherichia coli 101-1]
 gi|226839360|gb|EEH71381.1| alanyl-tRNA synthetase [Escherichia sp. 1_1_43]
 gi|238859951|gb|ACR61949.1| alanyl-tRNA synthetase [Escherichia coli BW2952]
 gi|260448253|gb|ACX38675.1| alanyl-tRNA synthetase [Escherichia coli DH1]
 gi|309703056|emb|CBJ02388.1| alanyl-tRNA synthetase [Escherichia coli ETEC H10407]
 gi|315137304|dbj|BAJ44463.1| alanyl-tRNA synthetase [Escherichia coli DH1]
 gi|323941473|gb|EGB37656.1| alanyl-tRNA synthetase [Escherichia coli E482]
 gi|323960644|gb|EGB56270.1| alanyl-tRNA synthetase [Escherichia coli H489]
 gi|323971514|gb|EGB66748.1| alanyl-tRNA synthetase [Escherichia coli TA007]
 gi|331036851|gb|EGI09075.1| alanine--tRNA ligase [Escherichia coli H736]
 gi|342364205|gb|EGU28307.1| alanyl-tRNA synthetase [Escherichia coli XH140A]
 gi|344194692|gb|EGV48764.1| alanyl-tRNA synthetase [Escherichia coli XH001]
 gi|345361176|gb|EGW93337.1| alanyl-tRNA synthetase [Escherichia coli STEC_EH250]
 gi|359332954|dbj|BAL39401.1| alanyl-tRNA synthetase [Escherichia coli str. K-12 substr. MDS42]
 gi|378008392|gb|EHV71351.1| alanyl-tRNA synthetase [Escherichia coli DEC6E]
 gi|385154307|gb|EIF16322.1| alanyl-tRNA synthetase [Escherichia coli O32:H37 str. P4]
 gi|385707084|gb|EIG44116.1| alanyl-tRNA synthetase [Escherichia coli H730]
 gi|386120933|gb|EIG69551.1| alanyl-tRNA synthetase [Escherichia sp. 4_1_40B]
 gi|386223852|gb|EII46201.1| alanine--tRNA ligase [Escherichia coli 2.3916]
 gi|386253881|gb|EIJ03571.1| alanine--tRNA ligase [Escherichia coli B41]
 gi|430937979|gb|ELC58228.1| alanyl-tRNA synthetase [Escherichia coli KTE44]
 gi|431092199|gb|ELD97903.1| alanyl-tRNA synthetase [Escherichia coli KTE51]
 gi|431114159|gb|ELE17711.1| alanyl-tRNA synthetase [Escherichia coli KTE56]
 gi|431162103|gb|ELE62561.1| alanyl-tRNA synthetase [Escherichia coli KTE77]
 gi|431169323|gb|ELE69542.1| alanyl-tRNA synthetase [Escherichia coli KTE81]
 gi|431198516|gb|ELE97338.1| alanyl-tRNA synthetase [Escherichia coli KTE111]
 gi|431220477|gb|ELF17810.1| alanyl-tRNA synthetase [Escherichia coli KTE156]
 gi|431237947|gb|ELF32893.1| alanyl-tRNA synthetase [Escherichia coli KTE161]
 gi|431241987|gb|ELF36414.1| alanyl-tRNA synthetase [Escherichia coli KTE171]
 gi|431280991|gb|ELF71899.1| alanyl-tRNA synthetase [Escherichia coli KTE42]
 gi|431419590|gb|ELH01939.1| alanyl-tRNA synthetase [Escherichia coli KTE154]
 gi|431466495|gb|ELH46515.1| alanyl-tRNA synthetase [Escherichia coli KTE197]
 gi|431563388|gb|ELI36600.1| alanyl-tRNA synthetase [Escherichia coli KTE120]
 gi|441604875|emb|CCP98104.1| Alanyl-tRNA synthetase [Escherichia coli O10:K5(L):H4 str. ATCC
           23506]
 gi|441652942|emb|CCQ01799.1| Alanyl-tRNA synthetase [Escherichia coli O5:K4(L):H4 str. ATCC
           23502]
 gi|449318268|gb|EMD08342.1| alanyl-tRNA ligase [Escherichia coli S17]
          Length = 876

 Score =  602 bits (1553), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 361/916 (39%), Positives = 514/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  K +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + ++++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   SF V + Q YG  + HIG L   AG   VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNTQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A G+RRI AVT   A     A      EV         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATVHADSDRLSEVAHLLKGDSNN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            A K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VVEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|331654174|ref|ZP_08355174.1| alanine--tRNA ligase [Escherichia coli M718]
 gi|331047556|gb|EGI19633.1| alanine--tRNA ligase [Escherichia coli M718]
          Length = 876

 Score =  602 bits (1553), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 361/916 (39%), Positives = 514/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  K +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + ++++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   SF V + Q YG  + HIG L   AG   VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVTQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A G+RRI AVT   A     A      EV         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATVHADSDRLSEVAHLLKGDSNN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            A K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|432675782|ref|ZP_19911237.1| alanyl-tRNA synthetase [Escherichia coli KTE142]
 gi|431212957|gb|ELF10876.1| alanyl-tRNA synthetase [Escherichia coli KTE142]
          Length = 876

 Score =  602 bits (1553), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 361/916 (39%), Positives = 514/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  K +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + ++++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   SF V + Q YG  + HIG L   AG   VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A G+RRI AVT   A     A      EV         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAITTVHADSDRLSEVVHLLKGDSNN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            A K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|374705855|ref|ZP_09712725.1| alanyl-tRNA synthetase [Pseudomonas sp. S9]
          Length = 874

 Score =  602 bits (1553), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 352/880 (40%), Positives = 502/880 (57%), Gaps = 89/880 (10%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F +FFE+K H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLRFFEEKGHTRVASSSLIPGNDPTLLFTNAGMNQFKDCFLGL-----EKRAY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           TRA  +QKC+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT  K
Sbjct: 58  TRATTSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWEFLTSDK 117

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFW 228
              LP ++L+ T +        A D+EA DIW +   +PA R++  G         DNFW
Sbjct: 118 WLNLPKEKLWVTVY--------ASDDEAFDIWTQQVGVPAERMIRIGDNKGAPYASDNFW 169

Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
            MGDTGPCGPC+EI +D   +           D    IEIWN VF+QFNR +DG + PLP
Sbjct: 170 AMGDTGPCGPCTEIFFDHGEHIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVMHPLP 229

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
           A  VDTG+G ER++++LQ+  SNYD D+F  + +A  +A G            A++   +
Sbjct: 230 APSVDTGMGLERISAVLQHVNSNYDIDLFQSLLNASAKAIGC-----------ANEGQAS 278

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            +VVADHIR+  F IADG  P NEGR YVLRRI+RRA R+G++ L A+  FF  +V  +V
Sbjct: 279 LKVVADHIRSCGFLIADGITPSNEGRGYVLRRIVRRACRHGNK-LGAKGSFFYKIVAALV 337

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
             MGD F ELKQ++AHI  ++  EE  F KTL +G++  ++   +++G V+ G   F L+
Sbjct: 338 AEMGDAFTELKQQQAHIERVLKTEEEQFAKTLEQGLKILEQDLLELKGSVIPGDVVFKLY 397

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DT+GFP+DLT  +A ER L +D EGF   M   RER+RSA              ++ A+ 
Sbjct: 398 DTFGFPVDLTADIARERELTIDEEGFEREMQAQRERARSA--------------SSFAMD 443

Query: 527 KRGVLATDDSFKFIWFQDHKSV--IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
              ++  D   +F+ ++       I A++   + +E++  G E  +VL  + FYAE GGQ
Sbjct: 444 YNNLVKVDSDTRFLGYETTSGSGKIIALFKDGQTVETLATGEEGVVVLDQTPFYAESGGQ 503

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           + D G++EG    F VR+    GG  +H G +T+G+   +VG  V  +V  D R+  A N
Sbjct: 504 VGDCGYLEGAGVRFDVRDTTKAGGAFLHHGIITQGS--LAVGASVKAEVSADVRQATALN 561

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ ALR+VLG+HV QKGS+V  ++LRFDFSH + + PE ++ +E IVN +++  
Sbjct: 562 HSATHLLHAALRQVLGEHVTQKGSLVDSQRLRFDFSHFEAIKPEQIKALEDIVNAEVRKN 621

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
            +V + E  +  AK   G  A+FGE Y D VRV+ +G                  S ELC
Sbjct: 622 SEVETDETDIDTAKA-KGAMALFGEKYGDDVRVLTMGG---------------GFSVELC 665

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGS 824
           GGTH+S T +   F + SE G+A G+RRI AVT   A     +A    KE   A+ ++GS
Sbjct: 666 GGTHVSRTGDIGLFKITSEAGVAAGVRRIEAVTGAQALAYLNSAEEQLKEA--AALVKGS 723

Query: 825 LLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEV-----------GL 873
              +  +      V E N Q   ++    A+AA++ G     S +E+           GL
Sbjct: 724 ---RENLLDKLSGVIERNRQLEKELEQLKAKAASAAGNDLAGSAIEIKGAKVLGARVDGL 780

Query: 874 DAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPE 913
           D  A+   V ++  + G  V++       +K V+ AGV +
Sbjct: 781 DGKALLAMVDQLKNKLGSAVILLG-GVLDDKVVLVAGVTQ 819


>gi|222157385|ref|YP_002557524.1| alanyl-tRNA synthetase [Escherichia coli LF82]
 gi|331674208|ref|ZP_08374968.1| alanine--tRNA ligase [Escherichia coli TA280]
 gi|387617964|ref|YP_006120986.1| alanyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
 gi|422828071|ref|ZP_16876243.1| alanyl-tRNA synthetase [Escherichia coli B093]
 gi|432603350|ref|ZP_19839592.1| alanyl-tRNA synthetase [Escherichia coli KTE66]
 gi|432681300|ref|ZP_19916670.1| alanyl-tRNA synthetase [Escherichia coli KTE143]
 gi|222034390|emb|CAP77132.1| alanyl-tRNA synthetase [Escherichia coli LF82]
 gi|312947225|gb|ADR28052.1| alanyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
 gi|331068302|gb|EGI39697.1| alanine--tRNA ligase [Escherichia coli TA280]
 gi|371615511|gb|EHO03910.1| alanyl-tRNA synthetase [Escherichia coli B093]
 gi|431139709|gb|ELE41487.1| alanyl-tRNA synthetase [Escherichia coli KTE66]
 gi|431219499|gb|ELF16910.1| alanyl-tRNA synthetase [Escherichia coli KTE143]
          Length = 876

 Score =  602 bits (1552), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 361/916 (39%), Positives = 514/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  K +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + ++++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   SF V + Q YG  + HIG L   AG   VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A G+RRI AVT   A     A      EV         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATVHADSDRLSEVAHLLKGDSNN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            A K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VVEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|427387200|ref|ZP_18883256.1| alanyl-tRNA synthetase [Bacteroides oleiciplenus YIT 12058]
 gi|425725805|gb|EKU88674.1| alanyl-tRNA synthetase [Bacteroides oleiciplenus YIT 12058]
          Length = 872

 Score =  602 bits (1552), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 330/749 (44%), Positives = 444/749 (59%), Gaps = 65/749 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R++F  FFE K H    S+P+V  +DPTL+F NAGMNQ+K I LG        +K 
Sbjct: 4   ANEIRNSFKSFFESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGN-----HPAKY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK +AI WAWE L +V 
Sbjct: 59  KRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKDAINWAWEYLVEVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           ++    LYAT F G  + GL  DNEA   W ++LP   +L     DNFWEMGDTGPCGPC
Sbjct: 119 KIDPKNLYATVFEGSPEEGLERDNEAASFWEQYLPKDHILNGNKHDNFWEMGDTGPCGPC 178

Query: 240 SEIHYDRTGNRDAA-----SLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + A      LVN D P  IEIWN+VF+QFNR++DGSL+ LPAK +DTG+
Sbjct: 179 SEIHIDSRSEEEKAKVPGNQLVNKDHPQVIEIWNLVFMQFNRKADGSLEGLPAKVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ+K SNYDTDVF PI  AI    G        G D  ++ D+A RV+ADHI
Sbjct: 239 GFERLVRTLQDKTSNYDTDVFQPILKAIADMAGT-----TYGKD--NQQDIAMRVIADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++F+I DG  P N    YV+RRILRRAVRYG   L  +  F   L+ ++++ MG+ +P
Sbjct: 292 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQRQAFMYKLLPVLIENMGEAYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ--GKV-LSGQDAFILWDTYGF 471
           EL+ ++  I ++I  EE SF +TL  GI   +K   D +  GK  +SG+DAF L+DT+GF
Sbjct: 352 ELEAQKELISKVIKEEEDSFLRTLETGIRLLEKTMADAKAAGKTEISGKDAFTLYDTFGF 411

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E G+  DI+ F+  M + ++R+R+A   + G  I +    T  +   G  
Sbjct: 412 PLDLTELILRENGMTADIKEFDAEMQQQKQRARNAAAIETGDWITLKEGTTEFV---GYD 468

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            T+     + ++  K   + +Y                IVL  + FYAE GGQ+ D G +
Sbjct: 469 YTEYETSILRYRQVKQKNQTLYQ---------------IVLDYTPFYAESGGQVGDTGAL 513

Query: 592 EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHML 651
              F +  V + +      IHI   T+          + C VD D+R   A NH+ TH+L
Sbjct: 514 VSEFETIEVIDTKKENNLPIHI---TKKLPEHPEAPMMAC-VDTDKRAACAANHSATHLL 569

Query: 652 NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKE 711
           + ALREVLG+HV+QKGS+V P+ LRFDFSH + V  E +RR+E +VN +I+A  ++F KE
Sbjct: 570 DSALREVLGEHVEQKGSLVTPDSLRFDFSHFQKVTDEEIRRVEHLVNAKIRA--NIFLKE 627

Query: 712 ---ATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
                + EAK + G  A+FGE Y D VRV+  G                  S E CGG H
Sbjct: 628 YRNIPIEEAKEL-GAIALFGEKYGDHVRVIQFGS-----------------SVEFCGGIH 669

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVT 797
           ++ T       +++E  +A G+RRI A T
Sbjct: 670 VAATGSIGMMKIVAESSVAAGVRRIEAYT 698


>gi|74313262|ref|YP_311681.1| alanyl-tRNA synthetase [Shigella sonnei Ss046]
 gi|157158305|ref|YP_001464004.1| alanyl-tRNA synthetase [Escherichia coli E24377A]
 gi|191167095|ref|ZP_03028916.1| alanyl-tRNA synthetase [Escherichia coli B7A]
 gi|193065058|ref|ZP_03046133.1| alanyl-tRNA synthetase [Escherichia coli E22]
 gi|193069650|ref|ZP_03050602.1| alanyl-tRNA synthetase [Escherichia coli E110019]
 gi|194427866|ref|ZP_03060412.1| alanyl-tRNA synthetase [Escherichia coli B171]
 gi|209920136|ref|YP_002294220.1| alanyl-tRNA synthetase [Escherichia coli SE11]
 gi|218555239|ref|YP_002388152.1| alanyl-tRNA synthetase [Escherichia coli IAI1]
 gi|218696288|ref|YP_002403955.1| alanyl-tRNA synthetase [Escherichia coli 55989]
 gi|260845339|ref|YP_003223117.1| alanyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|260856802|ref|YP_003230693.1| alanyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|260869370|ref|YP_003235772.1| alanyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|293449010|ref|ZP_06663431.1| alanyl-tRNA synthetase [Escherichia coli B088]
 gi|307314418|ref|ZP_07594023.1| alanyl-tRNA synthetase [Escherichia coli W]
 gi|331669429|ref|ZP_08370275.1| alanine--tRNA ligase [Escherichia coli TA271]
 gi|332280649|ref|ZP_08393062.1| alanyl-tRNA synthetase [Shigella sp. D9]
 gi|378711884|ref|YP_005276777.1| alanyl-tRNA synthetase [Escherichia coli KO11FL]
 gi|383179835|ref|YP_005457840.1| alanyl-tRNA synthetase [Shigella sonnei 53G]
 gi|386610056|ref|YP_006125542.1| alanyl-tRNA synthetase [Escherichia coli W]
 gi|386700397|ref|YP_006164234.1| alanyl-tRNA synthetase [Escherichia coli KO11FL]
 gi|386710547|ref|YP_006174268.1| alanyl-tRNA synthetase [Escherichia coli W]
 gi|415818369|ref|ZP_11508091.1| alanyl-tRNA synthetase [Escherichia coli OK1180]
 gi|418942124|ref|ZP_13495419.1| alanyl-tRNA synthetase [Escherichia coli O157:H43 str. T22]
 gi|419387306|ref|ZP_13928180.1| alanyl-tRNA synthetase [Escherichia coli DEC14D]
 gi|419862166|ref|ZP_14384783.1| alanyl-tRNA synthetase [Escherichia coli O103:H25 str. CVM9340]
 gi|419867527|ref|ZP_14389842.1| alanyl-tRNA synthetase [Escherichia coli O103:H2 str. CVM9450]
 gi|419875139|ref|ZP_14397020.1| alanyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9534]
 gi|419886128|ref|ZP_14406779.1| alanyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9545]
 gi|419887653|ref|ZP_14408222.1| alanyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9570]
 gi|419893005|ref|ZP_14413012.1| alanyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9574]
 gi|419904743|ref|ZP_14423730.1| alanyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM9942]
 gi|419907500|ref|ZP_14426323.1| alanyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10026]
 gi|419922450|ref|ZP_14440463.1| alanyl-tRNA synthetase [Escherichia coli 541-15]
 gi|419927078|ref|ZP_14444818.1| alanyl-tRNA synthetase [Escherichia coli 541-1]
 gi|419948490|ref|ZP_14464786.1| alanyl-tRNA synthetase [Escherichia coli CUMT8]
 gi|420090831|ref|ZP_14602593.1| alanyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9602]
 gi|420097685|ref|ZP_14608977.1| alanyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9634]
 gi|420109762|ref|ZP_14619861.1| alanyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9553]
 gi|420115104|ref|ZP_14624681.1| alanyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10021]
 gi|420123401|ref|ZP_14632293.1| alanyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10030]
 gi|420128890|ref|ZP_14637438.1| alanyl-tRNA ligase [Escherichia coli O26:H11 str. CVM10224]
 gi|420133449|ref|ZP_14641685.1| alanyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM9952]
 gi|422010635|ref|ZP_16357589.1| alanyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9455]
 gi|422760145|ref|ZP_16813905.1| alanyl-tRNA synthetase [Escherichia coli E1167]
 gi|422776092|ref|ZP_16829747.1| alanyl-tRNA synthetase [Escherichia coli H120]
 gi|422962690|ref|ZP_16972963.1| alanyl-tRNA synthetase [Escherichia coli H494]
 gi|423706850|ref|ZP_17681233.1| alanyl-tRNA synthetase [Escherichia coli B799]
 gi|424754171|ref|ZP_18182091.1| alanyl-tRNA ligase [Escherichia coli O26:H11 str. CFSAN001629]
 gi|424763353|ref|ZP_18190831.1| alanyl-tRNA ligase [Escherichia coli O111:H11 str. CFSAN001630]
 gi|424772984|ref|ZP_18200065.1| alanyl-tRNA ligase [Escherichia coli O111:H8 str. CFSAN001632]
 gi|427805849|ref|ZP_18972916.1| alanyl-tRNA synthetase [Escherichia coli chi7122]
 gi|427810440|ref|ZP_18977505.1| alanyl-tRNA synthetase [Escherichia coli]
 gi|432377868|ref|ZP_19620856.1| alanyl-tRNA synthetase [Escherichia coli KTE12]
 gi|432766034|ref|ZP_20000456.1| alanyl-tRNA synthetase [Escherichia coli KTE48]
 gi|432806846|ref|ZP_20040763.1| alanyl-tRNA synthetase [Escherichia coli KTE91]
 gi|432810378|ref|ZP_20044256.1| alanyl-tRNA synthetase [Escherichia coli KTE101]
 gi|432828304|ref|ZP_20061925.1| alanyl-tRNA synthetase [Escherichia coli KTE135]
 gi|432835624|ref|ZP_20069160.1| alanyl-tRNA synthetase [Escherichia coli KTE136]
 gi|432935592|ref|ZP_20134906.1| alanyl-tRNA synthetase [Escherichia coli KTE184]
 gi|432968740|ref|ZP_20157653.1| alanyl-tRNA synthetase [Escherichia coli KTE203]
 gi|433093037|ref|ZP_20279298.1| alanyl-tRNA synthetase [Escherichia coli KTE138]
 gi|433131209|ref|ZP_20316641.1| alanyl-tRNA synthetase [Escherichia coli KTE163]
 gi|433135870|ref|ZP_20321208.1| alanyl-tRNA synthetase [Escherichia coli KTE166]
 gi|433194715|ref|ZP_20378698.1| alanyl-tRNA synthetase [Escherichia coli KTE90]
 gi|443618718|ref|YP_007382574.1| alanyl-tRNA ligase [Escherichia coli APEC O78]
 gi|450220620|ref|ZP_21896389.1| alanyl-tRNA ligase [Escherichia coli O08]
 gi|123616373|sp|Q3YYG6.1|SYA_SHISS RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|205830081|sp|A7ZQC5.1|SYA_ECO24 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|73856739|gb|AAZ89446.1| alanyl-tRNA synthetase [Shigella sonnei Ss046]
 gi|157080335|gb|ABV20043.1| alanyl-tRNA synthetase [Escherichia coli E24377A]
 gi|190902877|gb|EDV62605.1| alanyl-tRNA synthetase [Escherichia coli B7A]
 gi|192927355|gb|EDV81974.1| alanyl-tRNA synthetase [Escherichia coli E22]
 gi|192957013|gb|EDV87464.1| alanyl-tRNA synthetase [Escherichia coli E110019]
 gi|194414099|gb|EDX30375.1| alanyl-tRNA synthetase [Escherichia coli B171]
 gi|209913395|dbj|BAG78469.1| alanyl-tRNA synthase [Escherichia coli SE11]
 gi|218353020|emb|CAU98845.1| alanyl-tRNA synthetase [Escherichia coli 55989]
 gi|218362007|emb|CAQ99613.1| alanyl-tRNA synthetase [Escherichia coli IAI1]
 gi|257755451|dbj|BAI26953.1| alanyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|257760486|dbj|BAI31983.1| alanyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|257765726|dbj|BAI37221.1| alanyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|291322100|gb|EFE61529.1| alanyl-tRNA synthetase [Escherichia coli B088]
 gi|306905986|gb|EFN36507.1| alanyl-tRNA synthetase [Escherichia coli W]
 gi|315061973|gb|ADT76300.1| alanyl-tRNA synthetase [Escherichia coli W]
 gi|323180115|gb|EFZ65667.1| alanyl-tRNA synthetase [Escherichia coli OK1180]
 gi|323377445|gb|ADX49713.1| alanyl-tRNA synthetase [Escherichia coli KO11FL]
 gi|323946425|gb|EGB42453.1| alanyl-tRNA synthetase [Escherichia coli H120]
 gi|324119946|gb|EGC13824.1| alanyl-tRNA synthetase [Escherichia coli E1167]
 gi|331063097|gb|EGI35010.1| alanine--tRNA ligase [Escherichia coli TA271]
 gi|332103001|gb|EGJ06347.1| alanyl-tRNA synthetase [Shigella sp. D9]
 gi|371591982|gb|EHN80910.1| alanyl-tRNA synthetase [Escherichia coli H494]
 gi|375322569|gb|EHS68319.1| alanyl-tRNA synthetase [Escherichia coli O157:H43 str. T22]
 gi|378230302|gb|EHX90424.1| alanyl-tRNA synthetase [Escherichia coli DEC14D]
 gi|383391924|gb|AFH16882.1| alanyl-tRNA synthetase [Escherichia coli KO11FL]
 gi|383406239|gb|AFH12482.1| alanyl-tRNA synthetase [Escherichia coli W]
 gi|385710983|gb|EIG47951.1| alanyl-tRNA synthetase [Escherichia coli B799]
 gi|388346107|gb|EIL11850.1| alanyl-tRNA synthetase [Escherichia coli O103:H25 str. CVM9340]
 gi|388346600|gb|EIL12310.1| alanyl-tRNA synthetase [Escherichia coli O103:H2 str. CVM9450]
 gi|388347066|gb|EIL12763.1| alanyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9545]
 gi|388349717|gb|EIL15185.1| alanyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9534]
 gi|388362338|gb|EIL26361.1| alanyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9570]
 gi|388366862|gb|EIL30573.1| alanyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM9942]
 gi|388369166|gb|EIL32786.1| alanyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9574]
 gi|388377045|gb|EIL39893.1| alanyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10026]
 gi|388396139|gb|EIL57267.1| alanyl-tRNA synthetase [Escherichia coli 541-15]
 gi|388408278|gb|EIL68631.1| alanyl-tRNA synthetase [Escherichia coli 541-1]
 gi|388421264|gb|EIL80882.1| alanyl-tRNA synthetase [Escherichia coli CUMT8]
 gi|394383380|gb|EJE60980.1| alanyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9634]
 gi|394384619|gb|EJE62178.1| alanyl-tRNA ligase [Escherichia coli O26:H11 str. CVM10224]
 gi|394385059|gb|EJE62604.1| alanyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9602]
 gi|394393913|gb|EJE70558.1| alanyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9455]
 gi|394405776|gb|EJE80878.1| alanyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9553]
 gi|394407236|gb|EJE82098.1| alanyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10021]
 gi|394417237|gb|EJE90987.1| alanyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10030]
 gi|394425709|gb|EJE98645.1| alanyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM9952]
 gi|412964031|emb|CCK47957.1| alanyl-tRNA synthetase [Escherichia coli chi7122]
 gi|412970619|emb|CCJ45269.1| alanyl-tRNA synthetase [Escherichia coli]
 gi|421934086|gb|EKT91864.1| alanyl-tRNA ligase [Escherichia coli O26:H11 str. CFSAN001629]
 gi|421937233|gb|EKT94850.1| alanyl-tRNA ligase [Escherichia coli O111:H8 str. CFSAN001632]
 gi|421940082|gb|EKT97562.1| alanyl-tRNA ligase [Escherichia coli O111:H11 str. CFSAN001630]
 gi|430897453|gb|ELC19655.1| alanyl-tRNA synthetase [Escherichia coli KTE12]
 gi|431309044|gb|ELF97321.1| alanyl-tRNA synthetase [Escherichia coli KTE48]
 gi|431354098|gb|ELG40841.1| alanyl-tRNA synthetase [Escherichia coli KTE91]
 gi|431360729|gb|ELG47328.1| alanyl-tRNA synthetase [Escherichia coli KTE101]
 gi|431384238|gb|ELG68299.1| alanyl-tRNA synthetase [Escherichia coli KTE136]
 gi|431384303|gb|ELG68363.1| alanyl-tRNA synthetase [Escherichia coli KTE135]
 gi|431451941|gb|ELH32395.1| alanyl-tRNA synthetase [Escherichia coli KTE184]
 gi|431469227|gb|ELH49157.1| alanyl-tRNA synthetase [Escherichia coli KTE203]
 gi|431609160|gb|ELI78489.1| alanyl-tRNA synthetase [Escherichia coli KTE138]
 gi|431645156|gb|ELJ12806.1| alanyl-tRNA synthetase [Escherichia coli KTE163]
 gi|431655112|gb|ELJ22152.1| alanyl-tRNA synthetase [Escherichia coli KTE166]
 gi|431714685|gb|ELJ78866.1| alanyl-tRNA synthetase [Escherichia coli KTE90]
 gi|443423226|gb|AGC88130.1| alanyl-tRNA ligase [Escherichia coli APEC O78]
 gi|449316507|gb|EMD06621.1| alanyl-tRNA ligase [Escherichia coli O08]
          Length = 876

 Score =  602 bits (1552), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 361/916 (39%), Positives = 514/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  K +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + ++++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   SF V + Q YG  + HIG L   AG   VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A G+RRI AVT   A     A      EV         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAITTVHADSDRLSEVAHLLKGDSNN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            A K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|423685250|ref|ZP_17660058.1| alanyl-tRNA synthetase [Vibrio fischeri SR5]
 gi|371495751|gb|EHN71346.1| alanyl-tRNA synthetase [Vibrio fischeri SR5]
          Length = 859

 Score =  602 bits (1552), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 365/913 (39%), Positives = 521/913 (57%), Gaps = 85/913 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG+   N      TR
Sbjct: 7   EIRRAFLAFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGSEKRN-----YTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI++AWE LT+   L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKQDAIKYAWEFLTERLEL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFWEMGD 232
           PADRL  T +          D+EA +IW K +  PA R++  G         DNFW+MGD
Sbjct: 122 PADRLLVTVY--------ETDDEAFEIWNKEMGIPADRIVRIGDNKGAPYASDNFWQMGD 173

Query: 233 TGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           TGPCGPC+EI YD      G R        D    IEIWN VF+QFNR +DG+++PLP  
Sbjct: 174 TGPCGPCTEIFYDHGEHIWGGRPGTP--EEDGDRFIEIWNNVFMQFNRHADGTMEPLPKP 231

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ +I+Q   SNY+ D+F  +   I++A         +G DD    + + R
Sbjct: 232 SVDTGMGIERIAAIMQGVHSNYEIDIFQTL---IKEAAKV------IGYDDLS--NQSLR 280

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           VVADHIR+ S+ I DG  P NEGR YVLRRI+RRAVR+G++ L A+  +F  LV  + ++
Sbjct: 281 VVADHIRSCSYLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAKGSYFYKLVGPLAEI 339

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    ELK+++A + +++  EE +FG+TL +G+    +A  +++G VL G+  F L+DT
Sbjct: 340 MGTAGEELKKQQALVEKVLKIEEENFGRTLERGMALLNEALDNLEGTVLDGETVFKLYDT 399

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP DLT  +A ER L +D +GF  AM+E R+R+R A      G    D +A   +   
Sbjct: 400 YGFPADLTNDVARERDLTIDEDGFEKAMEEQRQRAREA------GQFGTDYNAVIKVESE 453

Query: 529 GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDE 588
            V    DS       + K+ + A++   E ++++  G+E  ++L  + FYAE GGQ  D 
Sbjct: 454 TVFHGYDS------TEAKASVIALFREGEEVDALSAGDEAILILDQTPFYAESGGQCGDA 507

Query: 589 GFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
           G I    G F V +    G  + H G L EG    S  +  + +VD  RR  I  NH+ T
Sbjct: 508 GIITVETGKFVVTDTHKIGNAIGHHGKLVEGV--LSKADHAMAQVDETRRAAIILNHSAT 565

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+L+ ALR+VLG+HV QKGS+V  E LRFDFSH + V  E LR++E IVN+QI+    + 
Sbjct: 566 HLLHAALRQVLGEHVTQKGSLVKAENLRFDFSHLEAVKAEELRQVERIVNQQIRLNHTIE 625

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
           +    +  AK   G  A+FGE Y D VRV+++G                  S ELCGG H
Sbjct: 626 TDLMDIDAAKE-KGAMALFGEKYDDEVRVLSMG----------------EFSTELCGGIH 668

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAAC-SLEKEVDDASKIEGSLLE 827
            S+T +   F + SE GIA GIRRI AVT   A  A EA   + +K++++A+  +   LE
Sbjct: 669 ASSTGDIGLFKITSEGGIAAGIRRIEAVTGEAALDAIEAQQKAADKKLNEAAS-KAKQLE 727

Query: 828 KNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIE 887
           K ++++ + K+A +     +    E A      G    +++++ G +  A+R  V ++  
Sbjct: 728 K-EIQQLKDKLASQESASLINKVQEIA------GTKVLVAQLD-GAENKALRGMVDELKN 779

Query: 888 QKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLAS 947
           Q G  +++   + +  K  + AGV +  D   Q++  E +    Q + G+ G G+  +A 
Sbjct: 780 QIGSGIIMLG-NVSEGKVGLIAGVTK--DLIGQVKAGELVNMVAQQVGGKGG-GRPDMAQ 835

Query: 948 GQGTDAAQVTPAM 960
             GTDA  +  A+
Sbjct: 836 AGGTDAEALPNAL 848


>gi|306812426|ref|ZP_07446624.1| alanyl-tRNA synthetase [Escherichia coli NC101]
 gi|416336702|ref|ZP_11673172.1| Alanyl-tRNA synthetase [Escherichia coli WV_060327]
 gi|432382394|ref|ZP_19625334.1| alanyl-tRNA synthetase [Escherichia coli KTE15]
 gi|432388326|ref|ZP_19631208.1| alanyl-tRNA synthetase [Escherichia coli KTE16]
 gi|432514957|ref|ZP_19752178.1| alanyl-tRNA synthetase [Escherichia coli KTE224]
 gi|432612675|ref|ZP_19848833.1| alanyl-tRNA synthetase [Escherichia coli KTE72]
 gi|432647227|ref|ZP_19883013.1| alanyl-tRNA synthetase [Escherichia coli KTE86]
 gi|432656818|ref|ZP_19892519.1| alanyl-tRNA synthetase [Escherichia coli KTE93]
 gi|432700086|ref|ZP_19935237.1| alanyl-tRNA synthetase [Escherichia coli KTE169]
 gi|432746651|ref|ZP_19981314.1| alanyl-tRNA synthetase [Escherichia coli KTE43]
 gi|432906051|ref|ZP_20114779.1| alanyl-tRNA synthetase [Escherichia coli KTE194]
 gi|432939131|ref|ZP_20137281.1| alanyl-tRNA synthetase [Escherichia coli KTE183]
 gi|432972811|ref|ZP_20161675.1| alanyl-tRNA synthetase [Escherichia coli KTE207]
 gi|432986413|ref|ZP_20175131.1| alanyl-tRNA synthetase [Escherichia coli KTE215]
 gi|433039657|ref|ZP_20227253.1| alanyl-tRNA synthetase [Escherichia coli KTE113]
 gi|433083566|ref|ZP_20270020.1| alanyl-tRNA synthetase [Escherichia coli KTE133]
 gi|433102238|ref|ZP_20288315.1| alanyl-tRNA synthetase [Escherichia coli KTE145]
 gi|433145255|ref|ZP_20330394.1| alanyl-tRNA synthetase [Escherichia coli KTE168]
 gi|433189439|ref|ZP_20373532.1| alanyl-tRNA synthetase [Escherichia coli KTE88]
 gi|433199388|ref|ZP_20383281.1| alanyl-tRNA synthetase [Escherichia coli KTE94]
 gi|305854464|gb|EFM54902.1| alanyl-tRNA synthetase [Escherichia coli NC101]
 gi|320194836|gb|EFW69465.1| Alanyl-tRNA synthetase [Escherichia coli WV_060327]
 gi|430904908|gb|ELC26589.1| alanyl-tRNA synthetase [Escherichia coli KTE16]
 gi|430906135|gb|ELC27736.1| alanyl-tRNA synthetase [Escherichia coli KTE15]
 gi|431040332|gb|ELD50867.1| alanyl-tRNA synthetase [Escherichia coli KTE224]
 gi|431146858|gb|ELE48281.1| alanyl-tRNA synthetase [Escherichia coli KTE72]
 gi|431178574|gb|ELE78481.1| alanyl-tRNA synthetase [Escherichia coli KTE86]
 gi|431189621|gb|ELE89040.1| alanyl-tRNA synthetase [Escherichia coli KTE93]
 gi|431242331|gb|ELF36751.1| alanyl-tRNA synthetase [Escherichia coli KTE169]
 gi|431290591|gb|ELF81126.1| alanyl-tRNA synthetase [Escherichia coli KTE43]
 gi|431430442|gb|ELH12273.1| alanyl-tRNA synthetase [Escherichia coli KTE194]
 gi|431462126|gb|ELH42343.1| alanyl-tRNA synthetase [Escherichia coli KTE183]
 gi|431480288|gb|ELH60008.1| alanyl-tRNA synthetase [Escherichia coli KTE207]
 gi|431498189|gb|ELH77402.1| alanyl-tRNA synthetase [Escherichia coli KTE215]
 gi|431550055|gb|ELI24052.1| alanyl-tRNA synthetase [Escherichia coli KTE113]
 gi|431600322|gb|ELI69993.1| alanyl-tRNA synthetase [Escherichia coli KTE133]
 gi|431617817|gb|ELI86806.1| alanyl-tRNA synthetase [Escherichia coli KTE145]
 gi|431660413|gb|ELJ27285.1| alanyl-tRNA synthetase [Escherichia coli KTE168]
 gi|431704266|gb|ELJ68894.1| alanyl-tRNA synthetase [Escherichia coli KTE88]
 gi|431719689|gb|ELJ83741.1| alanyl-tRNA synthetase [Escherichia coli KTE94]
          Length = 876

 Score =  602 bits (1552), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 361/916 (39%), Positives = 514/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  K +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + ++++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKSVDAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   SF V + Q YG  + HIG L   AG   VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A G+RRI AVT   A     A      EV         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATVHADSDRLSEVAHLLKGDSNN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            A K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|331678669|ref|ZP_08379343.1| alanine--tRNA ligase [Escherichia coli H591]
 gi|331073499|gb|EGI44820.1| alanine--tRNA ligase [Escherichia coli H591]
          Length = 876

 Score =  602 bits (1552), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 361/916 (39%), Positives = 514/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  K +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + ++++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   SF V + Q YG  + HIG L   AG   VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A G+RRI AVT   A     A      EV         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAITTVHADSDRLSEVAHLLKGDSNN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            A K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQERANLSSKAIDVNGVKLLVSELS-GVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|291618585|ref|YP_003521327.1| alanyl-tRNA synthetase [Pantoea ananatis LMG 20103]
 gi|291153615|gb|ADD78199.1| AlaS [Pantoea ananatis LMG 20103]
          Length = 875

 Score =  602 bits (1552), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 359/919 (39%), Positives = 514/919 (55%), Gaps = 81/919 (8%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    +      TR
Sbjct: 7   EIRQAFLDFFNSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGQEKRD-----YTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK EAI +AWELLT  + +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKKEAIAFAWELLTGEQWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFWEM 230
           +LP +RL+ T +          D+EA DIW   +  P  R++  G         DNFW+M
Sbjct: 122 KLPKERLWVTVY--------ETDDEAYDIWANDIGVPRERIIRIGDNKGSAYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPCSEI YD   +           D    IEIWNIVF+QFNR++DG++ PLP  
Sbjct: 174 GDTGPCGPCSEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMLPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+T++LQ+  SNY+ D+F  + +A+ + TGA   + K           + R
Sbjct: 234 SVDTGMGLERITAVLQHVNSNYEIDLFQTLIEAVAKVTGATDLNNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A+D FF  LV  +++V
Sbjct: 283 VIADHIRSCAFLIADGVIPSNENRGYVLRRIIRRAVRHGN-MLGAKDAFFYKLVAPLIQV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    EL++++A +  ++ +EE  F KTL +G+    +    +QG  L G+  F L+DT
Sbjct: 342 MGAAGEELQRQQAQVENVLKSEEEQFAKTLERGLALLDEELAKLQGDTLDGETVFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           +GFP DLT  +  ER L +D  GF  AM++ R+R+R A    A  + V+  DA +     
Sbjct: 402 FGFPADLTADVCRERNLKIDEAGFEKAMEQQRQRAREASGFGADYSNVIRIDAAS----- 456

Query: 529 GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDE 588
                  SFK     D  + +K ++   E ++++  G +  IVL  + FY E GGQ+ D 
Sbjct: 457 -------SFKGYEQLDLTATVKGLFVNGEAVDALSAGQDAVIVLDETPFYGESGGQVGDT 509

Query: 589 GFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
           G ++G    F V++ Q YG  + HIG L+  +G+  VG+ +   VD  RR  I  NH+ T
Sbjct: 510 GELKGNNALFSVQDTQKYGQAIGHIGKLS--SGQLRVGDCLEAVVDEARRARIRLNHSAT 567

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+L+ ALR+VLG+HV QKGS+V  + LRFDFSH + + P+ +R++E IVN QI+  L V 
Sbjct: 568 HLLHAALRQVLGEHVAQKGSLVNDKYLRFDFSHFEAMKPQEIRQVEDIVNAQIRRNLPVE 627

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
           ++   L  AK   G  A+FGE Y   VRV+ +G                  S ELCGGTH
Sbjct: 628 TRVMDLEAAKA-KGAMALFGEKYDQQVRVLTMG----------------DFSVELCGGTH 670

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEK 828
            + T +   F + +E G A GIRRI A+T   A     A  S  +++    K   S L +
Sbjct: 671 AARTGDIGLFRIQAESGTAAGIRRIEAITGEAALAQVYAQSSQLQDIAQLVKANSSNLNE 730

Query: 829 ------NQVRKAQKKVAEENLQKAVKVATETAEAAAS-NGKPFCISRVEVGLDAAAVREA 881
                 + +R  +K++ +   Q A + + +    A    G    ++ +    D   +R  
Sbjct: 731 KVRGLVDHLRSLEKELQQLRDQHAAQESAQLGNHAVDVKGVKLLVTELS-NTDPKMLRTM 789

Query: 882 VLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKG 941
           V  +  Q G  ++V +T     K  + AGV +  D + +++  E L A L P  G  G G
Sbjct: 790 VDDLKNQLGSAIIVLAT-VADGKVSLIAGVTK--DLTDRVKAGE-LIAELAPKVGGKGGG 845

Query: 942 KGGLASGQGTDAAQVTPAM 960
           +  +A   G+DA  +  A+
Sbjct: 846 RPDMAQAGGSDATALKGAL 864


>gi|215488016|ref|YP_002330447.1| alanyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|417756934|ref|ZP_12405006.1| alanyl-tRNA synthetase [Escherichia coli DEC2B]
 gi|418997993|ref|ZP_13545584.1| alanyl-tRNA synthetase [Escherichia coli DEC1A]
 gi|419003253|ref|ZP_13550773.1| alanyl-tRNA synthetase [Escherichia coli DEC1B]
 gi|419009121|ref|ZP_13556545.1| alanyl-tRNA synthetase [Escherichia coli DEC1C]
 gi|419014603|ref|ZP_13561949.1| alanyl-tRNA synthetase [Escherichia coli DEC1D]
 gi|419025475|ref|ZP_13572695.1| alanyl-tRNA synthetase [Escherichia coli DEC2A]
 gi|419030173|ref|ZP_13577330.1| alanyl-tRNA synthetase [Escherichia coli DEC2C]
 gi|419035787|ref|ZP_13582871.1| alanyl-tRNA synthetase [Escherichia coli DEC2D]
 gi|419040862|ref|ZP_13587886.1| alanyl-tRNA synthetase [Escherichia coli DEC2E]
 gi|432544295|ref|ZP_19781135.1| alanyl-tRNA synthetase [Escherichia coli KTE236]
 gi|432549785|ref|ZP_19786550.1| alanyl-tRNA synthetase [Escherichia coli KTE237]
 gi|432622887|ref|ZP_19858913.1| alanyl-tRNA synthetase [Escherichia coli KTE76]
 gi|432719802|ref|ZP_19954768.1| alanyl-tRNA synthetase [Escherichia coli KTE9]
 gi|432816382|ref|ZP_20050163.1| alanyl-tRNA synthetase [Escherichia coli KTE115]
 gi|215266088|emb|CAS10508.1| alanyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|377842476|gb|EHU07530.1| alanyl-tRNA synthetase [Escherichia coli DEC1C]
 gi|377842678|gb|EHU07728.1| alanyl-tRNA synthetase [Escherichia coli DEC1A]
 gi|377846017|gb|EHU11033.1| alanyl-tRNA synthetase [Escherichia coli DEC1B]
 gi|377855848|gb|EHU20712.1| alanyl-tRNA synthetase [Escherichia coli DEC1D]
 gi|377861163|gb|EHU25983.1| alanyl-tRNA synthetase [Escherichia coli DEC2A]
 gi|377872649|gb|EHU37292.1| alanyl-tRNA synthetase [Escherichia coli DEC2B]
 gi|377876425|gb|EHU41030.1| alanyl-tRNA synthetase [Escherichia coli DEC2C]
 gi|377878789|gb|EHU43372.1| alanyl-tRNA synthetase [Escherichia coli DEC2D]
 gi|377889174|gb|EHU53641.1| alanyl-tRNA synthetase [Escherichia coli DEC2E]
 gi|431073230|gb|ELD80881.1| alanyl-tRNA synthetase [Escherichia coli KTE236]
 gi|431078953|gb|ELD85932.1| alanyl-tRNA synthetase [Escherichia coli KTE237]
 gi|431157915|gb|ELE58537.1| alanyl-tRNA synthetase [Escherichia coli KTE76]
 gi|431261305|gb|ELF53344.1| alanyl-tRNA synthetase [Escherichia coli KTE9]
 gi|431363262|gb|ELG49831.1| alanyl-tRNA synthetase [Escherichia coli KTE115]
          Length = 876

 Score =  602 bits (1552), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 361/916 (39%), Positives = 514/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  K +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + ++++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   SF V + Q YG  + HIG L   AG   VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A G+RRI AVT   A     A      EV         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATVHADSDRLNEVAHLLKGDSNN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            A K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|293412052|ref|ZP_06654775.1| alanyl-tRNA synthetase [Escherichia coli B354]
 gi|432870126|ref|ZP_20090583.1| alanyl-tRNA synthetase [Escherichia coli KTE147]
 gi|291468823|gb|EFF11314.1| alanyl-tRNA synthetase [Escherichia coli B354]
 gi|431409096|gb|ELG92271.1| alanyl-tRNA synthetase [Escherichia coli KTE147]
          Length = 876

 Score =  602 bits (1552), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 361/916 (39%), Positives = 514/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  K +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + ++++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   SF V + Q YG  + HIG L   AG   VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A G+RRI AVT   A     A      EV         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATVHADSDRLNEVAHLLKGDSNN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            A K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VVEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|387127525|ref|YP_006296130.1| alanyl-tRNA synthetase [Methylophaga sp. JAM1]
 gi|386274587|gb|AFI84485.1| Alanyl-tRNA synthetase [Methylophaga sp. JAM1]
          Length = 867

 Score =  602 bits (1552), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 362/920 (39%), Positives = 521/920 (56%), Gaps = 72/920 (7%)

Query: 63  VRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRA 122
           +R  F  FF DK H    SSP++P NDPTLLF NAGM Q+K +FLG      +  K TRA
Sbjct: 7   LRKLFLDFFADKGHEVVSSSPLIPANDPTLLFTNAGMVQFKEVFLGQ-----ETRKYTRA 61

Query: 123 CNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLP 182
             TQ+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK EAI++AWE LT+  +LP
Sbjct: 62  TTTQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIQYAWEFLTETLQLP 121

Query: 183 ADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFGCKDNFWEMGDTGPCGPCS 240
           A++L+ T F          D+EA DIWLK +   ASR    G KDNFW MGDTGPCGPCS
Sbjct: 122 AEKLWITVF--------EEDDEAADIWLKEIGVDASRFSRIGAKDNFWSMGDTGPCGPCS 173

Query: 241 EIHYDRTGNRDAA---SLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFE 297
           EI YD  G   A         D    IEIWN+VF+QF+R +DG+L PLP   VDTG+G E
Sbjct: 174 EIFYDH-GPEVAGGPPGTPEEDGDRYIEIWNLVFMQFDRSADGTLTPLPKPSVDTGMGLE 232

Query: 298 RLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTL 357
           RL ++LQ+K +NYD D+F  +  AIQ+ +G             D  + + RV+ADHIR+ 
Sbjct: 233 RLAAVLQHKHNNYDIDLFQNLIKAIQKLSGT-----------TDSSNTSLRVIADHIRSC 281

Query: 358 SFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELK 417
           +F I DG  P NEGR YVLRRI+RRA+R+G + L  ++ FF  LV  +V  MG+ FPEL 
Sbjct: 282 AFMITDGVQPSNEGRGYVLRRIIRRAIRHGHK-LGLKEAFFYKLVQPLVDEMGEAFPELT 340

Query: 418 QREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQ 477
           + +  + + +  EE  F  TL  G++    A +++  K + G+  F+L+DTYGFP+DLT 
Sbjct: 341 KAQPVVEQALQIEEERFADTLDNGLKILDHAIEEMGDKEIPGETIFLLYDTYGFPIDLTA 400

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSF 537
            +A ERGL +D+ GF   M+  R R+RSA   Q GG +      T  +    V    D  
Sbjct: 401 DIARERGLTIDVAGFERHMEAQRNRARSA--SQFGGGL----SETLIIDGETVFCGYDHM 454

Query: 538 KFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFGS 597
           +      ++ VI A+    E ++ +  G +  IVL  + FYAE GGQ+ D+G I      
Sbjct: 455 R------NEGVITALLVDGENVDKLHAGQQGIIVLDHTPFYAESGGQVGDQGEINTAGAH 508

Query: 598 FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALRE 657
           F V++ +  G    HIG   +G   F VG+ VI  VD   R+  A NH+ TH+L+ ALR 
Sbjct: 509 FIVKDTRKQGKAFTHIGECKDGT--FEVGQPVIAHVDEYNRQATALNHSATHLLHAALRN 566

Query: 658 VLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEA 717
           VLG+HV QKGS+V  ++LRFDFSH +PV  + LR IE +VN+ I+    V ++   + +A
Sbjct: 567 VLGEHVTQKGSLVDSQRLRFDFSHFEPVTADQLREIERMVNQHIRVNHAVETRLMPIEKA 626

Query: 718 KCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEA 777
           +  +G  A+FGE Y D VRV+++G                  S ELCGGTH+  T +   
Sbjct: 627 RQ-SGAMALFGEKYDDEVRVLSMGE----------------FSIELCGGTHVGRTGDIGL 669

Query: 778 FALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEK------NQV 831
             +++E GIA G+RRI AVT   A    E + +    + +  K +   +E+       + 
Sbjct: 670 MKIINETGIASGVRRIEAVTGEAALNYIEQSENRLNSISELVKAKPENIEEKTQQLVQRT 729

Query: 832 RKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGM 891
           R+ +K++     + A    ++ A +A   G    ++    G D  ++R+ V ++  + G 
Sbjct: 730 RQLEKELESLKSKLASSAGSDLAASATEIGSIKVLAANLEGADVKSLRDTVDQLKNKLGT 789

Query: 892 PVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGT 951
             ++ +T E   K  + AGV +  D + ++   + ++     + G+ G G+  +A G G+
Sbjct: 790 AAIILATVE-GEKITLIAGVTK--DATDKIRAGDLVSHVAAQVGGKGG-GRPDMAQGGGS 845

Query: 952 DAAQVTPAMDLAAEFAAMKL 971
           +  ++T A+D    + A KL
Sbjct: 846 EPQKLTAALDSVTNWVASKL 865


>gi|407070456|ref|ZP_11101294.1| alanyl-tRNA ligase [Vibrio cyclitrophicus ZF14]
          Length = 860

 Score =  602 bits (1552), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 369/916 (40%), Positives = 515/916 (56%), Gaps = 90/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR+ F KFFE K H    SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRNAFLKFFESKEHQIVDSSSLVPHNDPTLLFTNAGMNQFKDCFLGA-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK EAI +AWE LT+  +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEEAIGFAWEFLTETLQL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           P DRL  T +          D+EA DIW K   +PA R++  G K        DNFW MG
Sbjct: 122 PKDRLLVTVY--------ETDDEAFDIWNKKVGVPADRIVRIGDKEGGKQFESDNFWTMG 173

Query: 232 DTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
           DTGPCGPC+EI YD      G R        D    IEIWN VF+QFNR +DG+++PLP 
Sbjct: 174 DTGPCGPCTEIFYDHGEHIWGGRPGTP--EEDGDRFIEIWNNVFMQFNRHADGTMEPLPK 231

Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
             VDTG+G ER+++I+Q   SNY+ DVF  +  A  +          VG DD    + + 
Sbjct: 232 PAVDTGMGIERISAIMQGVHSNYEIDVFQKLIKATAEV---------VGHDDLS--NQSL 280

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RV+ADHIR+ SF IADG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF+ LV ++ +
Sbjct: 281 RVIADHIRSCSFLIADGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGVFFHKLVGVLAE 339

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWD 467
           VMG    ELK+++  + +++  EE +FG+TL +G+     A   ++GK L G+  F L+D
Sbjct: 340 VMGSAADELKKQQELVEKVLRIEEENFGRTLERGMVILNDALDALEGKELDGETVFKLYD 399

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
           TYGFP DLT  +A ER   +D EGF  AM+  R+R+R A      G    D +AT     
Sbjct: 400 TYGFPADLTNDVARERDFTIDEEGFEKAMEAQRKRAREA------GQFGTDYNAT----- 448

Query: 528 RGVLATDDSFKFIWFQDHKSV--IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
              +  D + +F  +   +    I A++   E + S+  G++  I+L  + FYAE GGQ 
Sbjct: 449 ---IKVDTNTEFCGYTSTEGAGEISALFVDGEEVSSLSAGDKAIIILEETPFYAESGGQC 505

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D G +    G F V++ Q  G    H G L EG   F+ G++V  +VD +RR  I+ NH
Sbjct: 506 GDAGTLSTASGLFKVQDTQKLGNAFAHHGELIEGV--FAQGDKVEARVDAERRAAISLNH 563

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+L+ ALREVLG+HV QKGS+V P+ LRFDFS+ + V P  ++ +E +VN Q++   
Sbjct: 564 SATHLLHSALREVLGEHVAQKGSLVKPDNLRFDFSNLEAVTPAQIKEVERLVNAQVRKNH 623

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    +  AK   G  A+FGE Y D VRV+++G                  S ELCG
Sbjct: 624 VIETNIMDIESAKQ-KGAMALFGEKYDDEVRVLSMG----------------DFSTELCG 666

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEA-ACSLEKEVDDASKIEGS 824
           G H SNT +   F + SE GIA GIRRI AVT   A  A EA A + E+++ +++K   S
Sbjct: 667 GIHASNTGDIGLFKITSEGGIAAGIRRIEAVTGEAALDAVEAQANAYEEKLAESAKKAKS 726

Query: 825 LLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLK 884
           L ++ Q+ K +   AE         A    +    +G    ++ +E G D   +R  V  
Sbjct: 727 LEKEIQLLKEKMAAAES--------ANIMGKVEDISGTKVLVAAIE-GADNKNLRTMVDN 777

Query: 885 VIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGG 944
              Q G  +++ + +    K  + AGV +  D   +++  + +    + + G+ G G+  
Sbjct: 778 AKNQVGSGIILIA-NIADGKVGLIAGVTK--DLVGKVKAGDLVKMVAEQVGGKGG-GRPD 833

Query: 945 LASGQGTDAAQVTPAM 960
           +A   GTD   +  A+
Sbjct: 834 MAQAGGTDVEALPEAL 849


>gi|110642817|ref|YP_670547.1| alanyl-tRNA synthetase [Escherichia coli 536]
 gi|432471983|ref|ZP_19714024.1| alanyl-tRNA synthetase [Escherichia coli KTE206]
 gi|432714389|ref|ZP_19949423.1| alanyl-tRNA synthetase [Escherichia coli KTE8]
 gi|433078829|ref|ZP_20265354.1| alanyl-tRNA synthetase [Escherichia coli KTE131]
 gi|123147797|sp|Q0TEI3.1|SYA_ECOL5 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|110344409|gb|ABG70646.1| alanyl-tRNA synthetase [Escherichia coli 536]
 gi|430996930|gb|ELD13200.1| alanyl-tRNA synthetase [Escherichia coli KTE206]
 gi|431255106|gb|ELF48362.1| alanyl-tRNA synthetase [Escherichia coli KTE8]
 gi|431595464|gb|ELI65461.1| alanyl-tRNA synthetase [Escherichia coli KTE131]
          Length = 876

 Score =  602 bits (1552), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 361/916 (39%), Positives = 514/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  K +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + ++++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   SF V + Q YG  + HIG L   AG   VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A G+RRI AVT   A     A      EV         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATVHADSERLSEVAHLLKGDSNN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            A K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|432802880|ref|ZP_20036836.1| alanyl-tRNA synthetase [Escherichia coli KTE84]
 gi|431347409|gb|ELG34297.1| alanyl-tRNA synthetase [Escherichia coli KTE84]
          Length = 876

 Score =  602 bits (1552), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 361/916 (39%), Positives = 514/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  K +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + ++++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKSVDAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   SF V + Q YG  + HIG L   AG   VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEDIRAVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A G+RRI AVT   A     A      EV         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATVHADSDRLSEVAHLLKGDSNN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            A K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|187734262|ref|YP_001881554.1| alanyl-tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|205830210|sp|B2U049.1|SYA_SHIB3 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|187431254|gb|ACD10528.1| alanyl-tRNA synthetase [Shigella boydii CDC 3083-94]
          Length = 876

 Score =  602 bits (1552), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 361/916 (39%), Positives = 514/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  K +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + ++++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   SF V + Q YG  + HIG L   AG   VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRVVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A G+RRI AVT   A     A      EV         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAITTVHADSDRLSEVAHLLKGDSNN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            A K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|425067172|ref|ZP_18470288.1| alanyl-tRNA synthetase [Proteus mirabilis WGLW6]
 gi|404601467|gb|EKB01876.1| alanyl-tRNA synthetase [Proteus mirabilis WGLW6]
          Length = 875

 Score =  602 bits (1551), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 364/918 (39%), Positives = 515/918 (56%), Gaps = 79/918 (8%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG  +        +R
Sbjct: 7   EIRQAFLDFFHTKGHQIVPSSSLVPNNDPTLLFTNAGMNQFKDVFLGLDN-----RPYSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI +AWELLT  + +
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAINFAWELLTGKEWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +        A D+EA DIW K   +PA R++  G         DNFW+M
Sbjct: 122 NLPKERLWVTVY--------ATDDEAYDIWNKEVGVPAERIIRIGDNKGAPFASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR+SDG++ PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGTPEEDGDRYIEIWNIVFMQFNRKSDGTMDPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+T++LQ+  SNYD D+F  +  ++ + T A            D  + + R
Sbjct: 234 SVDTGMGLERITAVLQHVNSNYDIDLFRALIKSVAEVTNA-----------TDLANKSLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ SF + DG  P NEGR YVLRRI+RRAVR+G  +L A+D FF  LV  ++ V
Sbjct: 283 VIADHIRSCSFLVCDGVIPSNEGRGYVLRRIIRRAVRHGY-MLGAKDTFFYKLVAPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           M +   ELK ++  + +++  EE  F +TL +G++   +  + + G  L+G+ AF L+DT
Sbjct: 342 MAEAGKELKNQQEIVEKVLKTEEEQFARTLERGLQLLDEELEKLTGDTLAGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFPLDLT  +  ER + VD EGF  AM+E R+R+R +           D +    +  R
Sbjct: 402 YGFPLDLTADVCRERNIKVDEEGFELAMEEQRKRARESS------GFGTDYNELIKVDSR 455

Query: 529 GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDE 588
              +  D        + +  I AI+   + +  +  G E  I L  ++FYAE GGQ+ D+
Sbjct: 456 SDFSGYDH------NEQQGTINAIFHNGQTVTELKAGEEGIIFLDKTAFYAESGGQVGDK 509

Query: 589 GFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
           G + G    F V + Q YG  + HIG +  G+  F V  ++   +D  RR  I  NH+ T
Sbjct: 510 GLLIGKDSQFEVTDTQKYGKAIGHIGKVISGS--FIVNHKINAIIDVARRDAIRLNHSAT 567

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+L+ ALR+VLG HV QKGS+V  + LRFDFSH + V PE LR IE IVN QI+    V 
Sbjct: 568 HLLHAALRQVLGTHVTQKGSLVNDKYLRFDFSHFEAVKPEQLREIEDIVNAQIRLNSPVV 627

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
           ++   L EAK   G  A+FGE Y + VRV+ +G                  S ELCGGTH
Sbjct: 628 TELMDLEEAKQ-KGAMALFGEKYEERVRVLTMG----------------DFSTELCGGTH 670

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGS-LLE 827
            + T +   F ++SE G A GIRRI A+T   A ++      L   V  A K +GS L+E
Sbjct: 671 AARTGDIGLFRIMSESGTAAGIRRIEAITGATAIESVHEQSDLISLVAHALKSDGSNLVE 730

Query: 828 KNQVRKAQKKVAEENLQ--KAVKVATETAE--AAASNGKPFCISRVEV-GLDAAAVREAV 882
           K +  + + +  E+ LQ  K  + A E++   + A N K   +   E+  ++   +R  V
Sbjct: 731 KIKTVQEKYRSLEKELQQLKDQQAAQESSSLGSQAKNVKGIKLLVRELNNVEPKMLRTMV 790

Query: 883 LKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGK 942
             +  Q G  ++V ST  +  K  +  GV +  D + +++  E ++   Q + G+ G G+
Sbjct: 791 DDLKNQLGSAIIVLSTI-SDGKVSLIVGVTK--DLTAKIKAGELISFVAQQIGGKGG-GR 846

Query: 943 GGLASGQGTDAAQVTPAM 960
             +A   GTD   +  A+
Sbjct: 847 PDMAQAGGTDVEALPAAL 864


>gi|422835922|ref|ZP_16883973.1| alanyl-tRNA synthetase [Escherichia coli E101]
 gi|371611289|gb|EHN99813.1| alanyl-tRNA synthetase [Escherichia coli E101]
          Length = 876

 Score =  602 bits (1551), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 360/916 (39%), Positives = 514/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  K +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + ++++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   SF V + Q YG  + HIG L   AG   VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGANFSFVVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A G+RRI AVT   A     A      EV         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATVHADSDRLSEVAHLLKGDSNN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            A K+   +    Q+ K  +++ E+    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LADKVRSVMERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|407470556|ref|YP_006783001.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 2009EL-2071]
 gi|407480782|ref|YP_006777931.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 2011C-3493]
 gi|410481348|ref|YP_006768894.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 2009EL-2050]
 gi|417806210|ref|ZP_12453156.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. LB226692]
 gi|417833962|ref|ZP_12480409.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 01-09591]
 gi|417866755|ref|ZP_12511795.1| alaS [Escherichia coli O104:H4 str. C227-11]
 gi|422988787|ref|ZP_16979560.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. C227-11]
 gi|422995679|ref|ZP_16986443.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. C236-11]
 gi|423000827|ref|ZP_16991581.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 09-7901]
 gi|423004496|ref|ZP_16995242.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 04-8351]
 gi|423010996|ref|ZP_17001730.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-3677]
 gi|423020224|ref|ZP_17010933.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4404]
 gi|423025390|ref|ZP_17016087.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4522]
 gi|423031211|ref|ZP_17021898.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4623]
 gi|423039036|ref|ZP_17029710.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C1]
 gi|423044156|ref|ZP_17034823.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C2]
 gi|423045884|ref|ZP_17036544.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C3]
 gi|423054423|ref|ZP_17043230.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C4]
 gi|423061398|ref|ZP_17050194.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C5]
 gi|429720253|ref|ZP_19255180.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-9450]
 gi|429772153|ref|ZP_19304173.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02030]
 gi|429777098|ref|ZP_19309073.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02033-1]
 gi|429785825|ref|ZP_19317720.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02092]
 gi|429791715|ref|ZP_19323569.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02093]
 gi|429792563|ref|ZP_19324412.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02281]
 gi|429799139|ref|ZP_19330937.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02318]
 gi|429802756|ref|ZP_19334516.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02913]
 gi|429812552|ref|ZP_19344235.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-03439]
 gi|429813100|ref|ZP_19344779.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-04080]
 gi|429818307|ref|ZP_19349942.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-03943]
 gi|429904659|ref|ZP_19370638.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-9990]
 gi|429908797|ref|ZP_19374761.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-9941]
 gi|429914669|ref|ZP_19380616.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4984]
 gi|429919699|ref|ZP_19385630.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-5604]
 gi|429925519|ref|ZP_19391432.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4986]
 gi|429929455|ref|ZP_19395357.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4987]
 gi|429935994|ref|ZP_19401880.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4988]
 gi|429941674|ref|ZP_19407548.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-5603]
 gi|429944355|ref|ZP_19410217.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-6006]
 gi|429951913|ref|ZP_19417759.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec12-0465]
 gi|429955262|ref|ZP_19421094.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec12-0466]
 gi|340733606|gb|EGR62737.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 01-09591]
 gi|340739505|gb|EGR73740.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. LB226692]
 gi|341920044|gb|EGT69653.1| alaS [Escherichia coli O104:H4 str. C227-11]
 gi|354862514|gb|EHF22952.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. C236-11]
 gi|354867798|gb|EHF28220.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. C227-11]
 gi|354868196|gb|EHF28614.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 04-8351]
 gi|354873798|gb|EHF34175.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 09-7901]
 gi|354880479|gb|EHF40815.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-3677]
 gi|354888313|gb|EHF48572.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4404]
 gi|354892221|gb|EHF52430.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4522]
 gi|354893427|gb|EHF53630.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C1]
 gi|354896230|gb|EHF56401.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4623]
 gi|354897607|gb|EHF57764.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C2]
 gi|354911459|gb|EHF71463.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C5]
 gi|354914583|gb|EHF74566.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C3]
 gi|354916365|gb|EHF76337.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C4]
 gi|406776510|gb|AFS55934.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 2009EL-2050]
 gi|407053079|gb|AFS73130.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 2011C-3493]
 gi|407066591|gb|AFS87638.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 2009EL-2071]
 gi|429347355|gb|EKY84128.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02092]
 gi|429358391|gb|EKY95060.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02030]
 gi|429360447|gb|EKY97105.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02093]
 gi|429361204|gb|EKY97860.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02033-1]
 gi|429363815|gb|EKZ00440.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02318]
 gi|429375860|gb|EKZ12392.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02281]
 gi|429377778|gb|EKZ14293.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-03439]
 gi|429389423|gb|EKZ25843.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02913]
 gi|429393592|gb|EKZ29983.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-03943]
 gi|429403261|gb|EKZ39545.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-04080]
 gi|429405748|gb|EKZ42012.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-9990]
 gi|429408629|gb|EKZ44864.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-9450]
 gi|429413065|gb|EKZ49254.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4987]
 gi|429415794|gb|EKZ51952.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4984]
 gi|429419475|gb|EKZ55610.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4986]
 gi|429430954|gb|EKZ67004.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4988]
 gi|429434990|gb|EKZ71010.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-5603]
 gi|429437216|gb|EKZ73223.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-6006]
 gi|429442333|gb|EKZ78290.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-5604]
 gi|429446483|gb|EKZ82411.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec12-0465]
 gi|429450688|gb|EKZ86581.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-9941]
 gi|429456161|gb|EKZ92007.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec12-0466]
          Length = 876

 Score =  602 bits (1551), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 361/916 (39%), Positives = 514/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  K +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + ++++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   SF V + Q YG  + HIG L   AG   VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A G+RRI AVT   A     A      EV         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAITTVHADSDRLSEVAHLLKGDSNN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            A K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGEVIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|255532429|ref|YP_003092801.1| alanyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
 gi|255345413|gb|ACU04739.1| alanyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
          Length = 900

 Score =  602 bits (1551), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 358/887 (40%), Positives = 506/887 (57%), Gaps = 106/887 (11%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R  + KFFE K H    S+P+V  NDPTL+F NAGMNQ+K +FLG A       K 
Sbjct: 3   AKEIRQAYLKFFESKQHHIVASAPIVVKNDPTLMFTNAGMNQFKDLFLGEAP-----IKY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  +TQ+C+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI W+WELLT+VY
Sbjct: 58  PRVTDTQRCLRVSGKHNDLEEVGIDTYHHTMFEMLGNWSFGDYFKKEAIAWSWELLTEVY 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           ++P D+LY + F GDEK GL  D EA ++W +++P  R++    KDNFWEMGDTGPCGPC
Sbjct: 118 KIPKDKLYVSIFEGDEKEGLPRDTEAYELWKQYVPEERIILGNKKDNFWEMGDTGPCGPC 177

Query: 240 SEIHYD-RTGNR----DAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D R  +     +  +LVN D P  IEIWN VF+QFNR  DGSL+ LPA+HVDTG+
Sbjct: 178 SEIHVDCRPDDERKLVEGKTLVNADHPQVIEIWNNVFMQFNRLKDGSLQLLPAQHVDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL  +LQ K SNYDTDVF P+   I    G      + G +  ++ D+A RV+ADH+
Sbjct: 238 GFERLVRVLQGKSSNYDTDVFQPLIQFIAAKAGI-----QYGMN--EQTDIAMRVMADHV 290

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R ++F IADG  P N    YV+RRILRRAVRY    L  +D F N LV ++ +    VF 
Sbjct: 291 RAIAFVIADGQLPSNNKAGYVIRRILRRAVRYAYTFLNLKDPFLNELVPVLAEQFKGVFE 350

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKF----KKAAQDVQGK--------------- 455
           EL  ++  ++++I  EE SF +TL  GI++F    KK A+ +  +               
Sbjct: 351 ELALQQDFVQKVILEEEVSFLRTLATGIQRFDSYTKKQAEFLMSENAIDPEKSFEDQWVH 410

Query: 456 -------VLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQN 508
                  V+SG+ AF L DTYGFP+DLT+LMA E+   VD+E +N A+ + +ERSR+A  
Sbjct: 411 SILKDQMVISGEFAFELNDTYGFPIDLTELMAREKRWSVDMEEYNKALLKQKERSRAATA 470

Query: 509 KQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNE- 567
              G  ++++ D                 +F+ + D ++  + I    ++      G E 
Sbjct: 471 VDTGDWVLVNPDL--------------EVEFVGYDDAEAETEII----KYRRVSAKGKEQ 512

Query: 568 VGIVLASSSFYAEQGGQIFDEGFIEGLFGSFYVR--NVQIYGGFVIHIG-SLTEG-AGRF 623
             IVL+ + FYAE GGQ+ D G +E     F+V   + +   G ++H   +L E   G F
Sbjct: 513 YQIVLSKTPFYAESGGQVGDTGRLEDHSRLFFVEITDTKKENGVIVHYADTLPEDIEGHF 572

Query: 624 SVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGK 683
                    +D ++R L   NHT TH+L+ AL++VLG HV+QKGS+V P+ LRFDFSH  
Sbjct: 573 ------WAVIDENKRLLSQDNHTATHLLHAALKKVLGSHVNQKGSLVNPDYLRFDFSHFA 626

Query: 684 PVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRK 743
            V  E L +IE +VN++I+  + +  +     +    +G+ A+FGE Y D VR++     
Sbjct: 627 RVTDEELSQIEHLVNQKIRENIPLKEQRYVPYDQAISSGVTALFGEKYGDLVRIITFDD- 685

Query: 744 VEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYK 803
                           S ELCGGTH+  T +   F +++E  +A G+RRI A+T   A +
Sbjct: 686 --------------HYSKELCGGTHVQATGQIGYFKIIAESAVAAGVRRIEAITADKA-E 730

Query: 804 AFEAACS---------LEKEVDDASKIEGSLLEKNQVRK-AQKKVAEE--NLQKAVKVAT 851
           AF  A +         L+   D  + + G + E N+++K A+K V E+  NL+  +    
Sbjct: 731 AFVLAQNKELNELRELLKGNKDLKAAVAGLIEENNRLKKDAEKAVLEQSANLKHEIVHHL 790

Query: 852 ETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFST 898
           +T      NG     + V++  +A AV+     V +      +VF+T
Sbjct: 791 KTI-----NGINLIATHVDLP-NADAVKNLAYAVKDMVDDLFLVFTT 831


>gi|432617857|ref|ZP_19853967.1| alanyl-tRNA synthetase [Escherichia coli KTE75]
 gi|431152749|gb|ELE53675.1| alanyl-tRNA synthetase [Escherichia coli KTE75]
          Length = 876

 Score =  602 bits (1551), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 359/913 (39%), Positives = 510/913 (55%), Gaps = 85/913 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  K +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A +   
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNAMIR-- 451

Query: 529 GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDE 588
             + +   FK     +    + A++   + ++++  G E  +VL  + FYAE GGQ+ D+
Sbjct: 452 --VNSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDK 509

Query: 589 GFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
           G ++G   SF V + Q YG  + HIG L   AG   VG+ V   VD  RR  I  NH+ T
Sbjct: 510 GELKGANFSFAVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNHSAT 567

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R +E +VN QI+  L + 
Sbjct: 568 HLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNLPIE 627

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
           +    L  AK   G  A+FGE Y + VRV+++G                  S ELCGGTH
Sbjct: 628 TNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCGGTH 670

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------DDAS 819
            S T +   F ++SE G A G+RRI AVT   A     A      EV         + A 
Sbjct: 671 ASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATVHADSDRLNEVAHLLKGDSNNLAD 730

Query: 820 KIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVR 879
           K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S +  G++   +R
Sbjct: 731 KVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPKMLR 787

Query: 880 EAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCG 939
             V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G+ G
Sbjct: 788 TMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGGKGG 844

Query: 940 KGKGGLASGQGTD 952
            G+  +A   GTD
Sbjct: 845 -GRPDMAQAGGTD 856


>gi|387132980|ref|YP_006298952.1| alanine--tRNA ligase [Prevotella intermedia 17]
 gi|386375828|gb|AFJ08706.1| alanine--tRNA ligase [Prevotella intermedia 17]
          Length = 901

 Score =  602 bits (1551), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 365/934 (39%), Positives = 520/934 (55%), Gaps = 69/934 (7%)

Query: 57  EWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQL 116
           E  A ++RD+F KFFE K HV   S+P+V  +DPTL+F NAGMNQ+K I LGT +P  + 
Sbjct: 16  EMTANEIRDSFKKFFESKGHVIVPSAPMVIKDDPTLMFTNAGMNQWKDIILGTKEPEPR- 74

Query: 117 SKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT 176
               R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK  AI++AWE L 
Sbjct: 75  ----RRADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKENAIDYAWEYLV 130

Query: 177 KVYRL-PADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGP 235
            V +L PAD LY T F G    G+A D+EA   WLK LPA  ++     DNFWEMG+TGP
Sbjct: 131 DVLKLNPAD-LYVTVFEGSPSEGIARDDEAAQYWLKHLPADHIIDGNKHDNFWEMGETGP 189

Query: 236 CGPCSEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHV 290
           CGPCSEIH D     + A      LVN D+P  IEIWNIVF+QF R+SDGSL+PL    +
Sbjct: 190 CGPCSEIHVDSRSAEEKAKTPGRELVNKDNPQVIEIWNIVFMQFQRKSDGSLEPLSMNVI 249

Query: 291 DTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGAR----PYSGKVGA--DDADKVD 344
           DTG+GFERL  +LQ K SNYDTD+F P    +++ +G +      SG+ G   ++ +K+D
Sbjct: 250 DTGMGFERLVRMLQGKNSNYDTDIFQPTIKEMERLSGKKYGFTTPSGENGEARNEQEKID 309

Query: 345 MAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNI 404
           +A RVVADH+R ++F+IAD   PGN    YV+RRILRRAVRY    L  ++ F   L+N 
Sbjct: 310 IAMRVVADHMRAVAFSIADSQLPGNAKAGYVIRRILRRAVRYAYTFLDQKEAFIYKLLNT 369

Query: 405 VVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV--QGKV-LSGQD 461
            +  MG+ +PEL  +   I  +I  EE SF +TL KGI     A  ++  QGK  L+G++
Sbjct: 370 FIHEMGNAYPELTAQRELIARVIKEEEDSFLRTLEKGINLLTNAMDEMKAQGKTELNGKE 429

Query: 462 AFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADA 521
           AF L+DTYGFPLDLT+L+  E G  VD + F   M++ + R+R+A   + G  +V+    
Sbjct: 430 AFRLFDTYGFPLDLTELICREHGFSVDEKQFEEEMEQQKARARNAAVVENGDWVVLKEGE 489

Query: 522 TAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQ 581
              +   G   T+   + + ++      K     + F E         +VL  + FY E 
Sbjct: 490 QEFV---GYDYTEYECRILRYR------KVTQKKNTFFE---------LVLDHTPFYGEM 531

Query: 582 GGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLI 641
           GGQ+ D+G +     +  + + +      IHI    +   + +  + + C VD D+R   
Sbjct: 532 GGQVGDQGVLVNEEETIDIVDTKRENNQSIHI---VKQLPKNAEADFMAC-VDTDKRDAS 587

Query: 642 APNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQI 701
           A NHT TH+L++AL++VLG+H +QKGS V  + LRFDFSH + V  E LR++E IVN+ I
Sbjct: 588 AANHTATHLLDYALKQVLGEHCEQKGSYVSADTLRFDFSHFQKVTDEELRQVERIVNDMI 647

Query: 702 KAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISA 761
           + +L       T  E     G  A+FGE Y D VRV++ G                  S 
Sbjct: 648 RQDLPRGEYRDTPLEQAKEMGAVALFGEKYGDKVRVISFGP-----------------SC 690

Query: 762 ELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVT----TGLAYKAFEAACSLEKEVDD 817
           E CGG H ++T     F ++SE  +A GIRR+ A+T        Y   +    L+   ++
Sbjct: 691 EFCGGIHATSTGRIGFFKIISESSVAAGIRRVEALTGKHCEETLYALEDTVRDLKAMFNN 750

Query: 818 ASKIEGSLLEKNQVRKAQKKVAEENLQKA-VKVATETAEAAAS-NGKPFCISRVEVGLDA 875
           A  ++G + +  Q   A KK  E   Q+A V+ A    E A + NG    + +  + ++ 
Sbjct: 751 AKDLKGVIEKYIQEHDAMKKEMESFRQQAVVRFANRLVERAETVNG--VKVVKAVLPVEP 808

Query: 876 AAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLK 935
           A+ ++ V KV E     ++        NK ++   + +   +  ++   + +  A + +K
Sbjct: 809 ASAKDIVFKVREAIPEKLVCVLGSTHENKPLLSIMLSDDMVKDHEMNAGKIIREAAKLIK 868

Query: 936 GRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAM 969
           G  G G+   A   G D   VT A+D A E A +
Sbjct: 869 G-GGGGQPHYAQAGGKDVEGVTAAVDKAIELANL 901


>gi|218547790|ref|YP_002381581.1| alanyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|218355331|emb|CAQ87938.1| alanyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
          Length = 876

 Score =  602 bits (1551), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 361/916 (39%), Positives = 514/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  K +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + ++++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   SF V + Q YG  + HIG L   AG   VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRKVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A G+RRI AVT   A     A      EV         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATVHADSDRLSEVAHLLKGDSNN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            A K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|406673591|ref|ZP_11080812.1| alanine-tRNA ligase [Bergeyella zoohelcum CCUG 30536]
 gi|405586056|gb|EKB59848.1| alanine-tRNA ligase [Bergeyella zoohelcum CCUG 30536]
          Length = 865

 Score =  602 bits (1551), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 351/874 (40%), Positives = 497/874 (56%), Gaps = 75/874 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R  F  FF+ K H    S+P+V  +DPTL+F+N+GM Q+K  FLG   P++     
Sbjct: 3   SQEIRQKFLDFFKSKGHEIVPSAPIVLKDDPTLMFSNSGMTQFKDFFLGYKQPSS----- 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  +TQKC+R  GKHNDLDDVG+DTYHHT FEMLGNWSFGDYFK EAIEWAWELLT VY
Sbjct: 58  LRVADTQKCLRVSGKHNDLDDVGRDTYHHTMFEMLGNWSFGDYFKKEAIEWAWELLTGVY 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           ++P + +Y T F GD    L  D EA + W   +   R+L    KDNFWEMG+ GPCGPC
Sbjct: 118 KIPKENIYVTIFEGDASENLDRDQEAYNFWKAHISEDRILNGNKKDNFWEMGEQGPCGPC 177

Query: 240 SEIHYDRTGNRDAA-----SLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + A      LVN D P  IE+WN+VF++FNR++DGSL+ LP ++VDTG+
Sbjct: 178 SEIHIDLRSEEEKAKISGKELVNQDHPQVIEVWNLVFMEFNRKADGSLEKLPKQNVDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF P+ + +++ + ++ Y GK+     D+ D+A RV+ DHI
Sbjct: 238 GFERLCMALQGKSSNYDTDVFTPLIEKVEEIS-SKKYEGKL----EDEKDIAIRVIVDHI 292

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R ++FAIADG  P N G  YV+RRILRRA+RYG   L  ++ F   LV+ +V+ MG+ FP
Sbjct: 293 RAVAFAIADGQLPSNNGAGYVIRRILRRAIRYGFTFLGQKEPFIYQLVDTLVQHMGEAFP 352

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLD 474
           ELK++   ++ +I  EE SF +TL +G+        + + K +SG  AF L+DTYGFP+D
Sbjct: 353 ELKKQHHLVQNVIREEENSFLRTLEQGLLMLDAMMNNAENKEISGSKAFELYDTYGFPID 412

Query: 475 LTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATD 534
           LT L+  E+G  +D  GF   + + +ERSR+A   +    +              V+  D
Sbjct: 413 LTALILAEKGFTLDEAGFEENLKKQKERSRAAAQTKTDDWV--------------VIRED 458

Query: 535 DSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGL 594
           D  +FI +   +  ++   T    +ES   G +  +V   + FY E GGQ+ D+GF+   
Sbjct: 459 DETEFIGYDATEGTVRI--TQYRKVESQKEGTQYQLVFNVTPFYPEGGGQVGDKGFLTSA 516

Query: 595 FGSF-YVRNVQIYGGFVIHIG-SLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLN 652
            G   Y+ + +     +IHI  SL E             K +   R L   NHT TH+L+
Sbjct: 517 SGEMTYILDTKKENNLIIHIAESLPENLNE-------SFKAEVKGRPLTEANHTATHLLH 569

Query: 653 FALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEA 712
            ALREVLG HV+Q+GS V  + LRFDFSH + V  E L+ +E  VNE+I  ++ +    +
Sbjct: 570 QALREVLGTHVEQRGSKVDFDGLRFDFSHFQKVTDEELQAVEKKVNERILQQIALKEHRS 629

Query: 713 TLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNT 772
              +     G  A+FGE Y D VR++          AD         S ELCGGTH+ NT
Sbjct: 630 ISMKEAMEAGAMALFGEKYGDKVRMIE--------FAD---------SKELCGGTHVKNT 672

Query: 773 REAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKNQVR 832
            +   F ++SE  +A GIRR+ A+T     K  E   +LE + +  S    +LL+   + 
Sbjct: 673 SDIWYFKIISEGAVASGIRRVEAITR---EKVKEYFFNLEAQHEKLS----ALLKSKDLV 725

Query: 833 KAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVG----------LDAAAVREAV 882
           K+ +K+ EEN Q   +V     E A    + +    V+ G          LDAA+V++ V
Sbjct: 726 KSTEKLQEENAQLKAEVEALKKEKAKGEVQNWKNQFVQSGDKQLLVKKTSLDAASVKDIV 785

Query: 883 LKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSD 916
            ++ ++    V+V  +D    K ++  GV +  D
Sbjct: 786 FQLKKEIAASVIVILSD-AGEKPMITVGVSDDLD 818


>gi|417663255|ref|ZP_12312835.1| alanyl-tRNA synthetase [Escherichia coli AA86]
 gi|432889934|ref|ZP_20102980.1| alanyl-tRNA synthetase [Escherichia coli KTE165]
 gi|330908728|gb|EGH37242.1| alanyl-tRNA synthetase [Escherichia coli AA86]
 gi|431432808|gb|ELH14484.1| alanyl-tRNA synthetase [Escherichia coli KTE165]
          Length = 876

 Score =  602 bits (1551), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 360/916 (39%), Positives = 514/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  K +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF+ AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFDAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + ++++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKSVDAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   SF V + Q YG  + HIG L    G   VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--VGSLKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRVVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A G+RRI AVT   A     A      EV         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATVHADSDRLSEVAHLLKGDSNN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            A K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|168787948|ref|ZP_02812955.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|261225988|ref|ZP_05940269.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK2000]
 gi|261256754|ref|ZP_05949287.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK966]
 gi|189372228|gb|EDU90644.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869]
          Length = 876

 Score =  602 bits (1551), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 360/916 (39%), Positives = 514/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  K +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + ++++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   SF V + Q YG  + HIG L   AG   VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGANFSFVVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R +E ++N QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLMNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A G+RRI AVT   A     A      EV         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAITTVHADSDRLSEVAHLLKGDSNN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            A K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|422331684|ref|ZP_16412699.1| alanyl-tRNA synthetase [Escherichia coli 4_1_47FAA]
 gi|373247277|gb|EHP66723.1| alanyl-tRNA synthetase [Escherichia coli 4_1_47FAA]
          Length = 876

 Score =  602 bits (1551), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 361/916 (39%), Positives = 513/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  K +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP  RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKGRLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + ++++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   SF V + Q YG  + HIG L   AG   VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGTNFSFAVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A G+RRI AVT   A     A      EV         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATVHADSDRLSEVAHLLKGDSNN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            A K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VVEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|149196141|ref|ZP_01873197.1| alanyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
 gi|149140988|gb|EDM29385.1| alanyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
          Length = 899

 Score =  601 bits (1550), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 360/895 (40%), Positives = 512/895 (57%), Gaps = 83/895 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTAD-PNTQLSK 118
           + ++R ++F FF+ K H    S+ ++P + P LLF NAGMNQ+ PIFLG    P T    
Sbjct: 4   SKEIRQSYFDFFKSKQHTLVSSASLMP-DSPNLLFTNAGMNQFVPIFLGEKKCPYTP--- 59

Query: 119 LTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKV 178
             RA +TQKCIRAGGKHNDL+DVG DTYHHTFFEMLGNWSF DYFK EAIE+AWE LTKV
Sbjct: 60  -GRATDTQKCIRAGGKHNDLEDVGMDTYHHTFFEMLGNWSFNDYFKKEAIEYAWEYLTKV 118

Query: 179 YRLPADRLYATYFGGDEKAGLAP--DNEARDIWLKFL------PASRVLPFGCKDNFWEM 230
            ++P +RLYAT +  D+ +G     D EA DIW          P   ++    KDNFW M
Sbjct: 119 CKIPKERLYATVYQPDKSSGDPADFDQEAYDIWADIFKADGLDPKVHIVNGDKKDNFWMM 178

Query: 231 GDTGPCGPCSEIHYDRTGNRDA-ASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKH 289
           G+TGPCGPC+E+H D T   D   SLVN D   CIEIWN+VFIQ N   DG+   LP K+
Sbjct: 179 GETGPCGPCTELHIDLTPAGDTKGSLVNMDTDKCIEIWNLVFIQMNANPDGTFSDLPTKN 238

Query: 290 VDTGLGFERLTSILQNK---------MSNYDTDVFMPIFDAIQQATGAR-----PYSGKV 335
           VDTG+GFERL SI+ N          +SNY+TD+F PIFD +   +G +     P   ++
Sbjct: 239 VDTGMGFERLASIILNTKNFTDFNGIISNYETDIFTPIFDKLTDISGKKYTSTLPEKNEL 298

Query: 336 G----ADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVL 391
           G    A+D + VD+A+RV+ADHIRTLSF+IADG  PGN  R YVLRRILRRAVRYG   +
Sbjct: 299 GYFVAANDQEMVDIAFRVIADHIRTLSFSIADGIQPGNGDRNYVLRRILRRAVRYG-RTI 357

Query: 392 KAQDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQD 451
             +  FF  LV+ +   MG++FPEL +   H++ +I +EE +F +TL +GI  F+     
Sbjct: 358 GLEKPFFYELVDTLADQMGEIFPELAKGRQHVKTVIKSEEEAFNRTLDRGINLFESEISK 417

Query: 452 V-QGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQ 510
           + +G  +S   AF L D  GFPLDLT+LMA E+G  VD++GF   M+E R+R+R+AQ K+
Sbjct: 418 LKKGDSISAAFAFRLADEQGFPLDLTELMAREQGYKVDVDGFEKLMNEQRDRARAAQKKE 477

Query: 511 AGGAIVMDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGI 570
                         +     + T +  +FI +++  S        ++  E +   N + +
Sbjct: 478 --------------IISLSEIKTTEPTEFIGYEEDNS------NEAQVKEVIKMKNGLAV 517

Query: 571 VLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVI 630
           +  SS  Y E GGQ+ D G I      + +++ Q  G   +H     E       GE+VI
Sbjct: 518 IFDSSVCYPEMGGQVGDSGTIAAGGKLYQIKDTQKNGDATLHYLVGDEAPEE---GEKVI 574

Query: 631 CKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHL 690
              D +RR  I  NHT TH+L+ AL+++LG+HV+QKGS+V  + LRFDFSH + +  + +
Sbjct: 575 VSYDIERRDKIRKNHTATHLLHKALQDLLGEHVEQKGSLVAADYLRFDFSHHQGLKADEI 634

Query: 691 RRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLAD 750
            ++E ++NE++     V +    + EAK + G  A+FGE Y D VRVV    K++D    
Sbjct: 635 EKLELLINEKVILNSAVETHLKNIDEAKAM-GAMALFGEKYDDDVRVV----KIDDF--- 686

Query: 751 PENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYK-AFEAAC 809
                    S ELCGGTH+  T +   F + SE  ++ GIRRI A+T   A K A  +  
Sbjct: 687 ---------SLELCGGTHVKRTGDIGLFKITSEGSVSAGIRRIEAITGMDAVKYALNSNK 737

Query: 810 SLEKEVDDASKIEGSLLEK----NQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFC 865
            L+    D      ++ E+    +   K+ +K  +E   K V +  ++    A       
Sbjct: 738 VLQGLAGDLKCKVDTIPERVDKLSSNAKSLQKELDEAKSKLVALEADSLLEKAEEINGIK 797

Query: 866 ISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQ 920
           +  ++V  DAA +++    + ++ G  ++VF++     K V+ +GV +  D +KQ
Sbjct: 798 VLMLKVDNDAATLKDMTHSLRKKIGSGIVVFAS-SANGKVVLTSGVSD--DLTKQ 849


>gi|417309142|ref|ZP_12095981.1| Alanyl-tRNA synthetase [Escherichia coli PCN033]
 gi|338769122|gb|EGP23903.1| Alanyl-tRNA synthetase [Escherichia coli PCN033]
          Length = 876

 Score =  601 bits (1550), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 359/913 (39%), Positives = 510/913 (55%), Gaps = 85/913 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  K +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYVSDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A +   
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNAMIR-- 451

Query: 529 GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDE 588
             + +   FK     +    + A++   + ++++  G E  +VL  + FYAE GGQ+ D+
Sbjct: 452 --VNSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDK 509

Query: 589 GFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
           G ++G   SF V + Q YG  + HIG L   AG   VG+ V   VD  RR  I  NH+ T
Sbjct: 510 GELKGANFSFAVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNHSAT 567

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R +E +VN QI+  L + 
Sbjct: 568 HLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNLPIE 627

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
           +    L  AK   G  A+FGE Y + VRV+++G                  S ELCGGTH
Sbjct: 628 TNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCGGTH 670

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------DDAS 819
            S T +   F ++SE G A G+RRI AVT   A     A      EV         + A 
Sbjct: 671 ASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATVHADSDRLNEVAHLLKGDSNNLAD 730

Query: 820 KIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVR 879
           K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S +  G++   +R
Sbjct: 731 KVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPKMLR 787

Query: 880 EAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCG 939
             V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G+ G
Sbjct: 788 TMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGGKGG 844

Query: 940 KGKGGLASGQGTD 952
            G+  +A   GTD
Sbjct: 845 -GRPDMAQAGGTD 856


>gi|343509707|ref|ZP_08746970.1| alanyl-tRNA synthetase [Vibrio scophthalmi LMG 19158]
 gi|342803889|gb|EGU39236.1| alanyl-tRNA synthetase [Vibrio scophthalmi LMG 19158]
          Length = 860

 Score =  601 bits (1550), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 363/908 (39%), Positives = 518/908 (57%), Gaps = 90/908 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR+ F KFFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRNAFLKFFESKGHQIVESSSLVPHNDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT+  +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIAFAWEFLTETLQL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           P DRL  T +          D+EA DIW +   +PA R++  G K        DNFW+MG
Sbjct: 122 PKDRLLVTIY--------ETDDEAFDIWNQKVGIPADRIIRIGDKKGGKPFESDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
           DTGPCGPC+EI YD      G R        D    IEIWN VF+QFNR++DG+++PLP 
Sbjct: 174 DTGPCGPCTEIFYDHGDHIWGGRPGTP--EEDGDRFIEIWNNVFMQFNRQADGTMEPLPK 231

Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
             VDTG+G ER+++I+Q   SNY+ DVF  +  A  +  G    S           + + 
Sbjct: 232 PSVDTGMGIERISAIMQGVHSNYEIDVFQALIKATAELIGCEDLS-----------NQSL 280

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RV+ADHIR+ SF I DG  P NEGR YVLRRI+RRAVR+G+++  AQ  FF+ LV ++ +
Sbjct: 281 RVIADHIRSCSFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNKI-GAQGVFFHKLVGVLAE 339

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWD 467
           +MG    ELK+++A + +++  EE +FG+TL +G+    +A  ++ G VL G+  F L+D
Sbjct: 340 IMGTAGEELKRQQALVEKVLRIEEENFGRTLERGMAILNEALDNLDGSVLDGETVFKLYD 399

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
           TYGFP DLT  +A ER   +D EGF  AM+E R+R+R A      G    D +A      
Sbjct: 400 TYGFPADLTNDVAREREFAIDEEGFEKAMEEQRQRAREA------GQFGTDYNAA----- 448

Query: 528 RGVLATDDSFKFIWF--QDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
              + TD   +F  +   + +SVI A++     ++S+  G++  I+L  + FYAE GGQ 
Sbjct: 449 ---IKTDVETEFSGYTGTEGESVIAALFVEGNEVDSLSAGDKAIIILEETPFYAESGGQS 505

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D G ++   G F V + Q  G  + H G L EG   F+ G++    VD  RR  I  NH
Sbjct: 506 GDAGVLKTESGLFTVEDTQKLGNAIAHHGVLAEGV--FAKGDKAHAMVDAVRRTAITLNH 563

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+L+ ALR+VLG+HV QKGS+V  + LRFDFSH + V    L+ +E IVN Q++   
Sbjct: 564 SATHLLHAALRKVLGEHVTQKGSLVKADNLRFDFSHLEGVTAAELKEVERIVNAQVRRNH 623

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
           D+ +    +  AK   G  A+FGE Y D VRV+++G                  S ELCG
Sbjct: 624 DIETNVMDIESAKQ-KGAMALFGEKYDDEVRVLSMG----------------EFSTELCG 666

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACS-LEKEVDDASKIEGS 824
           G H +NT +   F + SE GIA GIRRI AVT   A    EA  +  E+++ +A+    S
Sbjct: 667 GIHAANTGDIGLFKITSEGGIAAGIRRIEAVTGEAALDVIEAQTAKYEEKLAEAANKAKS 726

Query: 825 LLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLK 884
           L  + ++++ + K+A    Q +  +  +  + A   G    I++++ G D  A+R  V +
Sbjct: 727 L--EKEIQQLKDKLAS---QASASLTDQVKDIA---GVKVLIAQLD-GADNKALRGMVDE 777

Query: 885 VIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGG 944
           +  Q G  +++   +   +K  + AGV +  D   +++  E +    Q + G+ G G+  
Sbjct: 778 LKNQMGSGIIMLG-NVADDKVGLIAGVTK--DLVGKVKAGELVNMVAQQVGGKGG-GRPD 833

Query: 945 LASGQGTD 952
           +A   GTD
Sbjct: 834 MAQAGGTD 841


>gi|238921100|ref|YP_002934615.1| alanyl-tRNA synthetase, putative [Edwardsiella ictaluri 93-146]
 gi|238870669|gb|ACR70380.1| alanyl-tRNA synthetase, putative [Edwardsiella ictaluri 93-146]
          Length = 875

 Score =  601 bits (1550), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 358/932 (38%), Positives = 516/932 (55%), Gaps = 85/932 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  F+  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    +      +R
Sbjct: 7   EIRQAFLDFYHSKGHQVVDSSSLVPNNDPTLLFTNAGMNQFKDVFLGIDKRS-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI +AWELLT  + +
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAINFAWELLTGAQWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP ++L+ T +          D+EA DIW     +P  R++  G         DNFW+M
Sbjct: 122 NLPKEKLWVTVY--------ESDDEAFDIWANEVGVPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGNRDAA--SLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           G+TGPCGPC+EI YD   +         + D    IEIWNIVF+QFNR+SDG+L PLP  
Sbjct: 174 GETGPCGPCTEIFYDHGAHIAGGPPGSPDEDGDRYIEIWNIVFMQFNRQSDGTLLPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +     +  G    S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIAETARVIGVSDLSSK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F ++DG  P NEGR YVLRRI+RRAVR+G  +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLVSDGVLPSNEGRGYVLRRIIRRAVRHG-HMLGAKEAFFYKLVKPLIAV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG     L Q++A + +++  EE  F +TL +G+         + G  L G+ AF L+DT
Sbjct: 342 MGASADALAQQQAMVEQVLKTEEEQFARTLERGLTLLDDELSTLDGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFPLDLT  +  ER L VD EGF  AM+  R R+R +            AD  + +   
Sbjct: 402 YGFPLDLTADVCRERSLKVDEEGFERAMEAQRCRARESSG--------FGADYNSMIRVD 453

Query: 529 GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDE 588
           G  +TD  F     Q   +++ A++   E ++ +  G E  +VLA + FYAE GGQ+ D 
Sbjct: 454 G--STD--FTGYHLQQQDALVTALFHNGEAVDVLQAGEEGVVVLAQTPFYAESGGQVGDR 509

Query: 589 GFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
           G +      F V + Q YG  + H+G + +G+ R  VGE V   +D  RR+ I  +H+ T
Sbjct: 510 GELMAQGCRFVVEDTQKYGQAIGHLGKVAQGSLR--VGERVQAGIDGARRERIRQSHSAT 567

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+++ ALR VLG+HV QKGS+V    LRFDFSH + + P  +R++E IVN QI+  L + 
Sbjct: 568 HLMHAALRSVLGEHVAQKGSLVSDGALRFDFSHAEAMKPRQIRQVEDIVNAQIRRNLPID 627

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
           ++E  L EAK   G  A+FGE Y   VRV+++G                  S ELCGGTH
Sbjct: 628 TQEMGLEEAKA-KGAMALFGEKYDAQVRVLSMG----------------DFSTELCGGTH 670

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDD---------AS 819
              T +   F ++SE G A G+RRI AVT   A  A      + +E            A 
Sbjct: 671 AERTGDIGLFRIVSESGTAAGVRRIEAVTGEQALLAMHQESDMLREAASLVKGDAQSVAE 730

Query: 820 KIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVR 879
           KI   + +  Q+ KA  ++ ++  Q A + A+ + +A   NG    +S+++ G++   +R
Sbjct: 731 KIRAVMEKSRQLEKALHQLKDQ--QAAQESASLSGKAVEVNGVKLLVSQLD-GVEPKMLR 787

Query: 880 EAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCG 939
             V  +  Q    ++V +T E   K  + AGV +  D + +++  E +    Q + G+ G
Sbjct: 788 TMVDDLKNQMSSCIVVLATAE-AGKVSLIAGVTK--DLTAKVKAGELIGMVAQQVGGK-G 843

Query: 940 KGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
            G+  +A   GTD A +  A+   A++ + KL
Sbjct: 844 GGRPDMAQAGGTDTAALPQALASVADWVSAKL 875


>gi|343516972|ref|ZP_08753990.1| alanyl-tRNA synthetase [Vibrio sp. N418]
 gi|342794784|gb|EGU30538.1| alanyl-tRNA synthetase [Vibrio sp. N418]
          Length = 860

 Score =  601 bits (1550), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 363/908 (39%), Positives = 518/908 (57%), Gaps = 90/908 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR+ F KFFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRNAFLKFFESKGHQIVESSSLVPHNDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT+  +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIAFAWEFLTETLQL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           P DRL  T +          D+EA DIW +   +PA R++  G K        DNFW+MG
Sbjct: 122 PKDRLLVTIY--------ETDDEAFDIWNQKVGIPADRIIRIGDKKGGKPFESDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
           DTGPCGPC+EI YD      G R        D    IEIWN VF+QFNR++DG+++PLP 
Sbjct: 174 DTGPCGPCTEIFYDHGDHIWGGRPGTP--EEDGDRFIEIWNNVFMQFNRQADGTMEPLPK 231

Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
             VDTG+G ER+++I+Q   SNY+ DVF  +  A  +  G    S           + + 
Sbjct: 232 PSVDTGMGIERISAIMQGVHSNYEIDVFQALIKATAELIGCEDLS-----------NQSL 280

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RV+ADHIR+ SF I DG  P NEGR YVLRRI+RRAVR+G+++  AQ  FF+ LV ++ +
Sbjct: 281 RVIADHIRSCSFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNKI-GAQGVFFHKLVGVLAE 339

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWD 467
           +MG    ELK+++A + +++  EE +FG+TL +G+    +A  ++ G VL G+  F L+D
Sbjct: 340 IMGTAGEELKRQQALVEKVLRIEEENFGRTLERGMTILNEALDNLDGSVLDGETVFKLYD 399

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
           TYGFP DLT  +A ER   +D EGF  AM+E R+R+R A      G    D +A      
Sbjct: 400 TYGFPADLTNDVAREREFAIDEEGFEKAMEEQRQRAREA------GQFGTDYNAA----- 448

Query: 528 RGVLATDDSFKFIWF--QDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
              + TD   +F  +   + +SVI A++     ++S+  G++  I+L  + FYAE GGQ 
Sbjct: 449 ---IKTDVETEFSGYTGTEGESVIAALFVEGNEVDSLSAGDKAIIILEETPFYAESGGQS 505

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D G ++   G F V + Q  G  + H G L EG   F+ G++    VD  RR  I  NH
Sbjct: 506 GDAGVLKTESGLFTVEDTQKLGNAIAHHGVLAEGV--FAKGDKAHAMVDAVRRTAITLNH 563

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+L+ ALR+VLG+HV QKGS+V  + LRFDFSH + V    L+ +E IVN Q++   
Sbjct: 564 SATHLLHAALRKVLGEHVTQKGSLVKADNLRFDFSHLEGVTAAELKEVERIVNAQVRRNH 623

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
           D+ +    +  AK   G  A+FGE Y D VRV+++G                  S ELCG
Sbjct: 624 DIETNVMDIESAKQ-KGAMALFGEKYDDEVRVLSMG----------------EFSTELCG 666

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACS-LEKEVDDASKIEGS 824
           G H +NT +   F + SE GIA GIRRI AVT   A    EA  +  E+++ +A+    S
Sbjct: 667 GIHAANTGDIGLFKITSEGGIAAGIRRIEAVTGEAALDVIEAQTAKYEEKLAEAANKAKS 726

Query: 825 LLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLK 884
           L  + ++++ + K+A    Q +  +  +  + A   G    I++++ G D  A+R  V +
Sbjct: 727 L--EKEIQQLKDKLAS---QASASLTDQVKDIA---GVKVLIAQLD-GADNKALRGMVDE 777

Query: 885 VIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGG 944
           +  Q G  +++   +   +K  + AGV +  D   +++  E +    Q + G+ G G+  
Sbjct: 778 LKNQMGSGIIMLG-NVADDKVGLIAGVTK--DLVGKVKAGELVNMVAQQVGGKGG-GRPD 833

Query: 945 LASGQGTD 952
           +A   GTD
Sbjct: 834 MAQAGGTD 841


>gi|331648414|ref|ZP_08349502.1| alanine--tRNA ligase [Escherichia coli M605]
 gi|386620257|ref|YP_006139837.1| alanyl-tRNA synthetase [Escherichia coli NA114]
 gi|387830543|ref|YP_003350480.1| alanyl-tRNA synthetase [Escherichia coli SE15]
 gi|432422997|ref|ZP_19665539.1| alanyl-tRNA synthetase [Escherichia coli KTE178]
 gi|432501136|ref|ZP_19742891.1| alanyl-tRNA synthetase [Escherichia coli KTE216]
 gi|432559859|ref|ZP_19796526.1| alanyl-tRNA synthetase [Escherichia coli KTE49]
 gi|432695463|ref|ZP_19930659.1| alanyl-tRNA synthetase [Escherichia coli KTE162]
 gi|432706925|ref|ZP_19942005.1| alanyl-tRNA synthetase [Escherichia coli KTE6]
 gi|432920690|ref|ZP_20124279.1| alanyl-tRNA synthetase [Escherichia coli KTE173]
 gi|432928374|ref|ZP_20129494.1| alanyl-tRNA synthetase [Escherichia coli KTE175]
 gi|432982023|ref|ZP_20170796.1| alanyl-tRNA synthetase [Escherichia coli KTE211]
 gi|433097465|ref|ZP_20283646.1| alanyl-tRNA synthetase [Escherichia coli KTE139]
 gi|433106909|ref|ZP_20292879.1| alanyl-tRNA synthetase [Escherichia coli KTE148]
 gi|281179700|dbj|BAI56030.1| alanyl-tRNA synthetase [Escherichia coli SE15]
 gi|331042161|gb|EGI14303.1| alanine--tRNA ligase [Escherichia coli M605]
 gi|333970758|gb|AEG37563.1| Alanyl-tRNA synthetase [Escherichia coli NA114]
 gi|430943270|gb|ELC63388.1| alanyl-tRNA synthetase [Escherichia coli KTE178]
 gi|431027521|gb|ELD40583.1| alanyl-tRNA synthetase [Escherichia coli KTE216]
 gi|431090060|gb|ELD95833.1| alanyl-tRNA synthetase [Escherichia coli KTE49]
 gi|431232892|gb|ELF28494.1| alanyl-tRNA synthetase [Escherichia coli KTE162]
 gi|431256870|gb|ELF49804.1| alanyl-tRNA synthetase [Escherichia coli KTE6]
 gi|431439978|gb|ELH21308.1| alanyl-tRNA synthetase [Escherichia coli KTE173]
 gi|431442361|gb|ELH23450.1| alanyl-tRNA synthetase [Escherichia coli KTE175]
 gi|431490147|gb|ELH69764.1| alanyl-tRNA synthetase [Escherichia coli KTE211]
 gi|431614442|gb|ELI83595.1| alanyl-tRNA synthetase [Escherichia coli KTE139]
 gi|431625822|gb|ELI94379.1| alanyl-tRNA synthetase [Escherichia coli KTE148]
          Length = 876

 Score =  601 bits (1550), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 360/916 (39%), Positives = 514/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  K +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF+ AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFDAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + ++++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKSVDAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   SF V + Q YG  + HIG L    G   VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--VGSLKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A G+RRI AVT   A     A      EV         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATVHADSDRLSEVAHLLKGDSNN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            A K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|82778066|ref|YP_404415.1| alanyl-tRNA synthetase [Shigella dysenteriae Sd197]
 gi|123561812|sp|Q32CN1.1|SYA_SHIDS RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|81242214|gb|ABB62924.1| alanyl-tRNA synthetase [Shigella dysenteriae Sd197]
          Length = 876

 Score =  601 bits (1550), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 360/916 (39%), Positives = 514/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  K +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + ++++  G +  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQDAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   SF V + Q YG  + HIG L   AG   VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGANFSFVVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A G+RRI AVT   A     A      EV         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATVHADSDRLSEVAHLLKGDSNN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            A K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|351707970|gb|EHB10889.1| Putative alanyl-tRNA synthetase, mitochondrial [Heterocephalus
           glaber]
          Length = 947

 Score =  601 bits (1550), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 342/798 (42%), Positives = 466/798 (58%), Gaps = 77/798 (9%)

Query: 99  MNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 158
           MNQ+KPIFLGT DP ++++   R  N+QKC+RAGG+HNDL+DVG+D  HHTFFEMLGNW+
Sbjct: 1   MNQFKPIFLGTVDPRSEMAGFRRVANSQKCVRAGGRHNDLEDVGRDLSHHTFFEMLGNWA 60

Query: 159 FG-DYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPAS 216
           FG +YFK EA   AWELLT+VY +P DRL+ +YFGGD KAGL PD E+RDIWL   +P++
Sbjct: 61  FGGEYFKEEACTMAWELLTRVYGIPEDRLWVSYFGGDPKAGLDPDLESRDIWLSLGVPSN 120

Query: 217 RVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNR 276
            VL FG ++NFWEMGDTGPCGPC+EIHYD  G   A        P  +E+WN+VF+Q NR
Sbjct: 121 HVLSFGPQENFWEMGDTGPCGPCTEIHYDLAGGVGA--------PQLVELWNLVFMQHNR 172

Query: 277 ESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVG 336
           E+D SL+PLP +HVDTG+G ERL ++LQ + S YDTD+F P+F AI Q  GA PY G+VG
Sbjct: 173 EADRSLQPLPQQHVDTGMGLERLVAVLQGRCSTYDTDLFSPLFHAIHQGCGAPPYLGRVG 232

Query: 337 ADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG 396
           A D    D AYRVVADHIRTLS  IADG  PG  G   VLRRILRRAVR+ +EVL+A  G
Sbjct: 233 AADEGHTDTAYRVVADHIRTLSVCIADGVSPGMSGAPLVLRRILRRAVRFSTEVLRAPPG 292

Query: 397 FFNGLVNIVVKVMGDVFPELKQREA---------------------------HIREIIAA 429
               LV +VV+ +GD +PEL++  A                            I  +++ 
Sbjct: 293 LLGSLVPVVVETLGDAYPELQRNSAQVENPGDGRAVEKGFLQGTQLHCLLPGQIASLVSE 352

Query: 430 EEASFGKTLLKGIEKFKKAAQDVQGKVLSGQD---AFILWDTYGFPLDLTQLMAEERGLL 486
           +EA+F  +L +G     +  + +    L   D   +  L    G PLDL +LM EE+G+ 
Sbjct: 353 DEAAFLDSLQRGRRIIDRTLKRLGPSDLFPADVAWSLSLSGNLGLPLDLVELMLEEKGVQ 412

Query: 487 VDIEGFNNAM-DEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSFKFIW---- 541
           +D  G    + +EA+ R+  A+  Q    + ++  A   L  RG+  TDDS K+ +    
Sbjct: 413 LDSAGLAQLVQEEAQLRAHQAEPAQE-QRLCLNLHALGELQHRGMTPTDDSPKYSYSLQP 471

Query: 542 -----FQDHKSVIKAIYT-GSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLF 595
                F   ++ +  +YT     + +V PG   G++L  ++FYAEQGGQ  D G++    
Sbjct: 472 TGEYEFGPCEAQVLQLYTEDGAAVATVGPGQRCGLLLDRTNFYAEQGGQASDRGYLVRAG 531

Query: 596 GS---FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLN 652
                F V   Q++GGF++H    +E      VG++V   VD   R      HT TH+L+
Sbjct: 532 HQDVLFPVAQAQVWGGFILHEVLASE---HLQVGDKVQLHVDKAWRLGCMEKHTATHLLS 588

Query: 653 FALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEA 712
           +ALR+ LG   +Q+GS + PE LRFD +   P+ PE LR +E  V E ++ +  V++ E 
Sbjct: 589 WALRQTLGPSTEQRGSHLNPEWLRFDVATQAPLTPEQLRTVEGTVQEAVQQDEAVYTAEV 648

Query: 713 TLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNT 772
            L    C+ GLR+   EVYPDPVRVV++G  V   L DP ++  L  S ELC GTHL  T
Sbjct: 649 PLVLTACVPGLRS-LDEVYPDPVRVVSVGVPVARAL-DPMSQAALQASVELCCGTHLLRT 706

Query: 773 REAEAFALLSEEGIAKGIRRITAVTTGLAYK-------------AFEAACSLEKEVDDAS 819
                  ++ E  + KG  R+  +T   A +             A E   SL +EVD A+
Sbjct: 707 GAVGDLVIIRESQLTKGTTRLLVITGEQAQQVSTAVGRGDFRVWAREVGKSLAQEVDVAA 766

Query: 820 KI--EGS--LLEKNQVRK 833
           +    GS  L+E +Q+ K
Sbjct: 767 ERLNRGSRDLVEAHQLSK 784


>gi|417123258|ref|ZP_11972168.1| alanine--tRNA ligase [Escherichia coli 97.0246]
 gi|386146649|gb|EIG93094.1| alanine--tRNA ligase [Escherichia coli 97.0246]
          Length = 876

 Score =  601 bits (1549), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 360/916 (39%), Positives = 514/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  K +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + ++++  G E  +VL  + +YAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPYYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   SF V + Q YG  + HIG L   AG   VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGANFSFVVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A G+RRI AVT   A     A      EV         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAITTVHADSDRLSEVAHLLKGDSNN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            A K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|378581074|ref|ZP_09829724.1| alanyl-tRNA synthetase [Pantoea stewartii subsp. stewartii DC283]
 gi|377816153|gb|EHT99258.1| alanyl-tRNA synthetase [Pantoea stewartii subsp. stewartii DC283]
          Length = 875

 Score =  601 bits (1549), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 358/919 (38%), Positives = 512/919 (55%), Gaps = 81/919 (8%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    +      TR
Sbjct: 7   EIRQAFLDFFNSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGQDKRD-----YTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK EAI +AWELLT  + +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKKEAIAYAWELLTGDQWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFWEM 230
           RLP +RL+ T +          D+EA DIW   +  P  R++  G         DNFW+M
Sbjct: 122 RLPKERLWVTVY--------ETDDEAFDIWANDIGVPRERIIRIGDNKGSAYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG++ PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMLPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+T++LQ+  SNY+ D+F  + +A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERITAVLQHVNSNYEIDLFQKLINAVAEVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  +++V
Sbjct: 283 VIADHIRSCAFLIADGVIPSNENRGYVLRRIIRRAVRHGN-MLGAKEAFFYKLVAPLIEV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    EL++++A +  ++ +EE  F KTL +G+         ++G  L G+  F L+DT
Sbjct: 342 MGAAGEELQRQQAQVENVLKSEEEQFAKTLERGLALLDDELAKLKGDTLDGETVFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           +GFP DLT  +  ER L +D  GF  AM++ R+R+R A    A  + V+  DA +     
Sbjct: 402 FGFPADLTADVCRERNLKIDEAGFEKAMEQQRQRAREASGFGADYSNVIRTDAAS----- 456

Query: 529 GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDE 588
                  SFK     D  + +K ++   E +++V  G +  +VL  + FY E GGQ+ D 
Sbjct: 457 -------SFKGYDQLDLAATVKGLFVAGEAVDTVSAGQDAVVVLDETPFYGESGGQVGDT 509

Query: 589 GFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
           G ++G    F V++ Q YG  + HIG ++  +G+  +G+ V   VD  RR  I  NH+ T
Sbjct: 510 GVLKGNNVEFQVQDTQKYGQAIGHIGKVS--SGQLRIGDRVEAVVDEARRARIRLNHSAT 567

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+++ ALR+VLG+HV QKGS+V  + LRFDFSH + + P+ +R++E IVN QI+  L V 
Sbjct: 568 HLMHAALRQVLGEHVAQKGSLVNDKYLRFDFSHFEAMKPQEIRQVEDIVNAQIRRNLPVE 627

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
           +    L  AK   G  A+FGE Y   VRV+ +G                  S ELCGGTH
Sbjct: 628 TDVMDLEAAKA-KGAMALFGEKYDQRVRVLTMG----------------DFSVELCGGTH 670

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEK 828
            + T +   F + +E G A GIRRI AVT   A     A  S  +++    K   S L  
Sbjct: 671 AARTGDIGLFRIQAESGSAAGIRRIEAVTGEAALAQVYAQSSQLQDIAQLVKANSSNLND 730

Query: 829 ------NQVRKAQKKVAEENLQKAVKVATETAEAAAS-NGKPFCISRVEVGLDAAAVREA 881
                 + VR  +K++ +   Q+A + + +    A    G    ++ +    D   +R  
Sbjct: 731 KVRGLVDHVRSLEKELQQLRDQQAAQESAQLGNNAIDVKGAKLLVTELS-NTDPKMLRTM 789

Query: 882 VLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKG 941
           V  +  Q G  ++V +T     K  + AGV +  D + +++  E L A L P  G  G G
Sbjct: 790 VDDLKNQLGSAIIVLAT-VAEGKVSLIAGVTK--DLTDRVKAGE-LIAELAPKVGGKGGG 845

Query: 942 KGGLASGQGTDAAQVTPAM 960
           +  +A   G+DA  +  A+
Sbjct: 846 RPDMAQAGGSDATALKGAL 864


>gi|170682603|ref|YP_001744844.1| alanyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|432442120|ref|ZP_19684458.1| alanyl-tRNA synthetase [Escherichia coli KTE189]
 gi|432447225|ref|ZP_19689523.1| alanyl-tRNA synthetase [Escherichia coli KTE191]
 gi|433014935|ref|ZP_20203274.1| alanyl-tRNA synthetase [Escherichia coli KTE104]
 gi|433024508|ref|ZP_20212487.1| alanyl-tRNA synthetase [Escherichia coli KTE106]
 gi|433322487|ref|ZP_20399930.1| alanyl-tRNA ligase [Escherichia coli J96]
 gi|205830086|sp|B1LQ15.1|SYA_ECOSM RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|170520321|gb|ACB18499.1| alanyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|430965368|gb|ELC82789.1| alanyl-tRNA synthetase [Escherichia coli KTE189]
 gi|430972071|gb|ELC89069.1| alanyl-tRNA synthetase [Escherichia coli KTE191]
 gi|431529252|gb|ELI05954.1| alanyl-tRNA synthetase [Escherichia coli KTE104]
 gi|431533732|gb|ELI10225.1| alanyl-tRNA synthetase [Escherichia coli KTE106]
 gi|432348993|gb|ELL43435.1| alanyl-tRNA ligase [Escherichia coli J96]
          Length = 876

 Score =  601 bits (1549), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 360/916 (39%), Positives = 514/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  K +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + ++++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   SF V + Q YG  + HIG L  G+    VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGANFSFAVEDTQKYGQAIGHIGKLATGS--LKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A G+RRI AVT   A     A      EV         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATVHADSDRLSEVAHLLKGDSNN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            A K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|219870706|ref|YP_002475081.1| alanyl-tRNA synthetase [Haemophilus parasuis SH0165]
 gi|219690910|gb|ACL32133.1| alanyl-tRNA synthetase [Haemophilus parasuis SH0165]
          Length = 875

 Score =  601 bits (1549), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 362/931 (38%), Positives = 522/931 (56%), Gaps = 80/931 (8%)

Query: 61  TKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLT 120
           +++R  F +FF+ K H    SS +VP NDPTLLF NAGMNQ+K +FLG    +       
Sbjct: 5   SEIRQAFLEFFQSKGHTIVPSSSLVPENDPTLLFTNAGMNQFKDVFLGLDKRS-----YN 59

Query: 121 RACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KV 178
           RA ++Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT  + 
Sbjct: 60  RATSSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKPDAIAFAWEFLTSPQW 119

Query: 179 YRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFWE 229
             LP ++L+ T +          D+EA DIW + +  PA  ++  G         DNFW+
Sbjct: 120 LALPKEKLWVTVY--------ETDDEAYDIWNREIGVPAEHIVRIGDNKGAPYASDNFWQ 171

Query: 230 MGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
           MGDTGPCGPC+EI YD   +           D    IE+WN+VF+QFNR++DG+LK LP 
Sbjct: 172 MGDTGPCGPCTEIFYDHGDHIWGGPPGSAEEDGDRFIEVWNVVFMQFNRQADGTLKKLPK 231

Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
             VDTG+G ER++++LQ+  SNY+ D+F  +   I         +  +   D D  + + 
Sbjct: 232 PSVDTGMGLERISAVLQHVNSNYEIDIFQALIKEI---------ASLLNVTDLD--NKSL 280

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RV+ADHIR+ ++ IADG  P NEGR YVLRRI+RRAVR+G+ +L A+  FF  LV  + K
Sbjct: 281 RVIADHIRSCAYLIADGVMPSNEGRGYVLRRIIRRAVRHGN-ILGAKSAFFYQLVPTLAK 339

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWD 467
            MG     L Q++AHI++ + AEE  F +TL +G+   + A   V+ KVLSG+ AF L+D
Sbjct: 340 AMGQAGEILTQKQAHIQKALKAEEDQFARTLERGLALLEDALTKVENKVLSGEVAFKLYD 399

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
           TYGFPLDLT  +  ER + +D  GF   M   R R++++ N       V+  D +     
Sbjct: 400 TYGFPLDLTADVCRERSITIDEAGFEREMQAQRARAQASSNFGTDYNYVIKVDGST---- 455

Query: 528 RGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFD 587
                    FK     + ++ + A+++  + +E++  G    +VL  ++FY E GGQ+ D
Sbjct: 456 --------EFKGYEVTECEATVVALFSNGKAVEAIQSGENAVVVLDRTAFYGESGGQVGD 507

Query: 588 EGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTC 647
            G I     +F V + Q YG    HIG L   +G  SVG++V  +V+  RR  I  NH+ 
Sbjct: 508 SGVIASEICNFEVNDTQKYGQVFGHIGQL--ASGTLSVGDKVKAEVNATRRHAITLNHSA 565

Query: 648 THMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDV 707
           TH+L+ ALR+VLGDHV QKGS+V    LRFDFS G+ +    L  IE I+N +I+  + V
Sbjct: 566 THLLHSALRQVLGDHVAQKGSLVSENSLRFDFSQGEAISKADLEEIERIINTKIRENIVV 625

Query: 708 FSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGT 767
            ++   L  AK   G  A+FGE Y D VRVV       D+ A        + S ELCGGT
Sbjct: 626 TTEVMDLESAKQ-KGAMALFGEKYGDRVRVV-------DMTA--------AFSVELCGGT 669

Query: 768 HLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIE-GSLL 826
           H+  T E   F ++SE  +A G+RRI AVT   A         +  +  +  K +  SL+
Sbjct: 670 HVKQTGEIGLFKVVSEGAVAAGVRRIEAVTGENAIGLLHQQQQILNQSAELLKADTASLV 729

Query: 827 EK-NQVRKAQKKVAEENLQKAVKVATETA-----EAAASNGKPFCISRVEVGLDAAAVRE 880
           EK  Q+++  KKV +E  Q   K+A +       +A   NG    + R+E  +DA A+R 
Sbjct: 730 EKIQQLQEKSKKVEKELQQLKDKLAAQAGGELAKQAQQINGVNVVVQRLE-NVDAKALRT 788

Query: 881 AVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGK 940
            V  +  Q G  V+VF+T +T  K  +  GV +  D + ++   E +    Q + G+ G 
Sbjct: 789 MVDDLKNQLGSAVIVFAT-QTDEKVNLIVGVTK--DLTDKVNAGELVGLMAQEVGGKGG- 844

Query: 941 GKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           G+  +A   G+    +T A+++A  +   KL
Sbjct: 845 GRADMAMAGGSQPENITQALNVATNWIQAKL 875


>gi|429332663|ref|ZP_19213377.1| alanyl-tRNA synthetase [Pseudomonas putida CSV86]
 gi|428762651|gb|EKX84852.1| alanyl-tRNA synthetase [Pseudomonas putida CSV86]
          Length = 873

 Score =  601 bits (1549), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 358/894 (40%), Positives = 507/894 (56%), Gaps = 92/894 (10%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F +FFE++ H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLRFFEEQGHTRVASSSLIPGNDPTLLFTNAGMNQFKDCFLGQ-----EKRAY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           TRA ++QKC+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AW  LT  K
Sbjct: 58  TRAVSSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAITFAWTFLTSEK 117

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFW 228
              LP D+L+ T +        A D+EA DIW K   +PA R++  G         DNFW
Sbjct: 118 WLNLPKDKLWVTVY--------ATDDEAYDIWTKEVGVPAERMVRIGDNKGAPYASDNFW 169

Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
            MGDTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG L PLP
Sbjct: 170 TMGDTGPCGPCTEIFYDHGADIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLP 229

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
           A  VDTG+G ER++++LQ+  SNY+ D+F  +  A  +A G             D+   +
Sbjct: 230 APSVDTGMGLERISAVLQHVHSNYEIDLFQSLLAASAKAIGC-----------TDEGQPS 278

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            +VVADHIR+  F IADG  P NEGR YVLRRI+RRA R+G++ L A+  FF  +V  +V
Sbjct: 279 LKVVADHIRSCGFLIADGVVPSNEGRGYVLRRIIRRACRHGNK-LGAKGSFFYQIVAALV 337

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
             MGD FPELK ++AHI  ++  EE  F KTL +G++  ++   D++G V+ G+  F L+
Sbjct: 338 AEMGDAFPELKTQQAHIERVLKTEEEQFAKTLEQGLKILEQDLADLKGNVIPGEVVFKLY 397

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFP+DLT  +A ER L +D EGF   M+  RER+RSA              +   L 
Sbjct: 398 DTYGFPMDLTADIARERELSIDEEGFEREMEAQRERARSA--------------SAFGLD 443

Query: 527 KRGVLATDDSFKFIWFQ--DHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
              ++  D   +F+ +   +  + I A+Y   + +E +  G E  ++L  + FYAE GGQ
Sbjct: 444 YNSLVKVDVDTEFLGYSATEGSAKIVALYKDGQSVEQLGEGEEGVVILDRTPFYAESGGQ 503

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           I D G+++     F VR+    GG  +H G +   +G+  VG +V  +VD D +K  A N
Sbjct: 504 IGDTGYLQAGAARFDVRDTTKTGGAFLHHGVIA--SGKLVVGAQVEARVDADVQKATALN 561

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ ALR+VLG+HV QKGS+V  ++LRFDFSH + V PE ++ +E IVN +I+  
Sbjct: 562 HSATHLLHAALRQVLGEHVQQKGSLVNSQRLRFDFSHPEAVKPEQIKALEEIVNREIRRN 621

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
            +V ++E  +  AK   G  A+FGE Y D VRV+++G                  S ELC
Sbjct: 622 SEVQTEETDIDTAKQ-KGAMALFGEKYGDSVRVLSMG----------------DFSVELC 664

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGS 824
           GG H   T +     ++SE G+A G+RRI AVT   A      A    KE   A  ++GS
Sbjct: 665 GGIHAKRTGDIGLLKIVSEGGVASGVRRIEAVTGAAALAYLNGAEEQLKEA--AQLVKGS 722

Query: 825 LLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEV-GLDAAAVR---- 879
              ++ +      V E N Q   ++    A+AA++ G     S V+V G+   A R    
Sbjct: 723 ---RDNLIDKLSAVLERNRQLEKQLEQLQAKAASAAGDDLANSAVDVKGVKVLAARLDGQ 779

Query: 880 --EAVLKVIEQ----KGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWL 927
             +A+L +++Q     G  V++  +     K V+ AGV +  D + QL+  + +
Sbjct: 780 DGKALLALVDQLKNKLGRAVILLGSVH-EEKVVLVAGVTK--DLTGQLKAGDLM 830


>gi|197284276|ref|YP_002150148.1| alanyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|227357820|ref|ZP_03842168.1| alanyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
 gi|425073315|ref|ZP_18476421.1| alanyl-tRNA synthetase [Proteus mirabilis WGLW4]
 gi|194681763|emb|CAR40964.1| alanyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|227161930|gb|EEI46948.1| alanyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
 gi|404595293|gb|EKA95838.1| alanyl-tRNA synthetase [Proteus mirabilis WGLW4]
          Length = 875

 Score =  600 bits (1548), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 363/918 (39%), Positives = 515/918 (56%), Gaps = 79/918 (8%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG  +        +R
Sbjct: 7   EIRQAFLDFFHTKGHQIVPSSSLVPNNDPTLLFTNAGMNQFKDVFLGLDN-----RPYSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI +AWELLT  + +
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAINFAWELLTGKEWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +        A D+EA DIW K   +PA R++  G         DNFW+M
Sbjct: 122 NLPKERLWVTVY--------ATDDEAYDIWNKEVGVPAERIIRIGDNKGAPFASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR+SDG++ PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGTPEEDGDRYIEIWNIVFMQFNRKSDGTMDPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+T++LQ+  SNYD D+F  +  ++ + T A            D  + + R
Sbjct: 234 SVDTGMGLERITAVLQHVNSNYDIDLFRALIKSVAEVTNA-----------TDLANKSLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ SF + DG  P NEGR YVLRRI+RRAVR+G  +L A+D FF  LV  ++ V
Sbjct: 283 VIADHIRSCSFLVCDGVIPSNEGRGYVLRRIIRRAVRHGY-MLGAKDTFFYKLVAPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           M +   ELK ++  + +++  EE  F +TL +G++   +  + + G  L+G+ AF L+DT
Sbjct: 342 MAEAGKELKNQQEIVEKVLKTEEEQFARTLERGLQLLDEELEKLTGDTLAGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFPLDLT  +  ER + VD EGF  AM+E R+R+R +           D +    +  R
Sbjct: 402 YGFPLDLTADVCRERNIKVDEEGFELAMEEQRKRARESS------GFGTDYNELIKVDSR 455

Query: 529 GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDE 588
              +  D        + +  I AI+   + +  +  G E  I L  ++FYAE GGQ+ D+
Sbjct: 456 SDFSGYDH------NEQQGTINAIFHNGQTVTELKAGEEGIIFLDKTAFYAESGGQVGDK 509

Query: 589 GFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
           G + G    F V + Q YG  + HIG +  G+  F V  ++   +D  RR  I  NH+ T
Sbjct: 510 GLLIGKDSQFEVTDTQKYGKAIGHIGKVISGS--FIVNHKINAVIDVARRDAIRLNHSAT 567

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+L+ ALR+VLG HV QKGS+V  + LRFDFSH + V PE LR IE IVN QI+    V 
Sbjct: 568 HLLHAALRQVLGTHVTQKGSLVNDKYLRFDFSHFEAVKPEQLREIEDIVNAQIRLNSPVV 627

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
           ++   L +AK   G  A+FGE Y + VRV+ +G                  S ELCGGTH
Sbjct: 628 TELMDLEDAKQ-KGAMALFGEKYEERVRVLTMG----------------DFSTELCGGTH 670

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGS-LLE 827
            + T +   F ++SE G A GIRRI A+T   A ++      L   V  A K +GS L+E
Sbjct: 671 AARTGDIGLFRIMSESGTAAGIRRIEAITGATAIESVHEQSDLISLVAHALKSDGSNLVE 730

Query: 828 KNQVRKAQKKVAEENLQ--KAVKVATETAE--AAASNGKPFCISRVEV-GLDAAAVREAV 882
           K +  + + +  E+ LQ  K  + A E++   + A N K   +   E+  ++   +R  V
Sbjct: 731 KIKTVQEKYRSLEKELQQLKDQQAAQESSSLGSQAKNVKGIKLLVRELNNVEPKMLRTMV 790

Query: 883 LKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGK 942
             +  Q G  ++V ST  +  K  +  GV +  D + +++  E ++   Q + G+ G G+
Sbjct: 791 DDLKNQLGSAIIVLSTI-SDGKVSLIVGVTK--DLTAKIKAGELISFVAQQIGGKGG-GR 846

Query: 943 GGLASGQGTDAAQVTPAM 960
             +A   GTD   +  A+
Sbjct: 847 PDMAQAGGTDVEALPAAL 864


>gi|157148231|ref|YP_001455550.1| alanyl-tRNA synthetase [Citrobacter koseri ATCC BAA-895]
 gi|205830024|sp|A8ANQ1.1|SYA_CITK8 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|157085436|gb|ABV15114.1| hypothetical protein CKO_04048 [Citrobacter koseri ATCC BAA-895]
          Length = 875

 Score =  600 bits (1548), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 360/915 (39%), Positives = 515/915 (56%), Gaps = 89/915 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT    +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP DRL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKDRLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAAYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNY+ D+F  + +A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYEIDLFRTLIEAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVVPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    ELK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEELKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A +   
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNAMIRVD 453

Query: 529 GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDE 588
           G       FK     +    + A++   + ++++  G E  +VL  + FYAE GGQ+ D+
Sbjct: 454 GA----SEFKGYDHLELNGKVTALFVDGKAVDAISAGQEAVVVLDQTPFYAESGGQVGDK 509

Query: 589 GFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
           G ++G   +F V + Q YG  + HIG+L+ G+    VG+ V   VD  RR  I  NH+ T
Sbjct: 510 GELKGAGFAFAVSDTQKYGQAIGHIGTLSTGS--LKVGDAVQADVDDARRARIRLNHSAT 567

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+++ ALR++LG HV QKGS+V  + LRFDFSH + + P  +R +E +VN QI+  L V 
Sbjct: 568 HLMHAALRQILGTHVAQKGSLVNDKVLRFDFSHNEAMKPSEIRAVEDLVNAQIRRNLPVE 627

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
           +    L  AK   G  A+FGE Y D VRV+++G                  S ELCGGTH
Sbjct: 628 TNIMDLEAAKA-KGAMALFGEKYDDRVRVLSMG----------------DFSTELCGGTH 670

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEG----- 823
            S T +   F ++SE G A G+RRI AVT   A     A    ++  D A  ++G     
Sbjct: 671 ASRTGDIGLFRIVSESGTAAGVRRIEAVTGEGAIATLHAES--DRLSDIAQLLKGDSQNL 728

Query: 824 -----SLLEKNQVRKAQKKVAEENLQKAVK-VATETAEAAASNGKPFCISRVEVGLDAAA 877
                S+LE+   R+ +K++ +   Q A +  A  +++A   NG    +S +  G++   
Sbjct: 729 GEKVRSVLER--TRQLEKELQQLKEQAAAQESANLSSKAVDINGVKLLVSEL-AGVEPKM 785

Query: 878 VREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGR 937
           +R  V  +  Q G  V+V +T     K  + AGV +  D + +++  E +    Q + G+
Sbjct: 786 LRTMVDDLKNQLGSTVIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELVGMVAQQVGGK 842

Query: 938 CGKGKGGLASGQGTD 952
            G G+  +A   GTD
Sbjct: 843 GG-GRPDMAQAGGTD 856


>gi|432393137|ref|ZP_19635966.1| alanyl-tRNA synthetase [Escherichia coli KTE21]
 gi|430917400|gb|ELC38447.1| alanyl-tRNA synthetase [Escherichia coli KTE21]
          Length = 876

 Score =  600 bits (1548), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 360/916 (39%), Positives = 513/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  K +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +  A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MFGAKETFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + ++++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   SF V + Q YG  + HIG L   AG   VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A G+RRI AVT   A     A      EV         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATVHADSDRLSEVAHLLKGDSNN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            A K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|194337650|ref|YP_002019444.1| alanyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
 gi|194310127|gb|ACF44827.1| alanyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
          Length = 888

 Score =  600 bits (1548), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 378/932 (40%), Positives = 526/932 (56%), Gaps = 93/932 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R +F  +F  K H   +S+PV+P +DPTLLF NAGMNQ+K +FLG            R
Sbjct: 5   EIRQSFLDYFAQKAHTIVRSAPVIPADDPTLLFTNAGMNQFKDVFLGKGS-----RPYVR 59

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A +TQKCIRA GKHNDL+DVG+DTYHHTFFEMLGNWSFGDY+K EAI WAWELLT V++L
Sbjct: 60  AADTQKCIRASGKHNDLEDVGRDTYHHTFFEMLGNWSFGDYYKQEAITWAWELLTDVWKL 119

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLKF--LPASRVLPFGCKDNFWEMGDTGPCGPC 239
           P +RLYAT +          D+E+  IW     +    ++ FG KDNFWEMG+TGPCGPC
Sbjct: 120 PKERLYATVY--------QDDDESFQIWKTATDINPDHIIRFGEKDNFWEMGETGPCGPC 171

Query: 240 SEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERL 299
           SEIH D T +    SLVN  D   IE+WN+VFIQ+NR+SDGSL+PLP KHVDTG+GFER+
Sbjct: 172 SEIHIDLTEDGSGHSLVNVGDYRVIELWNLVFIQYNRQSDGSLEPLPMKHVDTGMGFERV 231

Query: 300 TSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSF 359
            ++LQ K SNYD+DVF P+FD I + TG R      GA   D +D+A RV+ADH RTL+F
Sbjct: 232 AAVLQGKGSNYDSDVFQPLFDRITEITGVR-----YGASMDDPLDIAMRVIADHARTLTF 286

Query: 360 AIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQR 419
           A++DG+ P NEGR YVLRRILRRA+RY S+ L   +   + LV  +   MGDVFPEL+++
Sbjct: 287 ALSDGAMPSNEGRGYVLRRILRRALRY-SKNLGYNEPILHQLVGTLAASMGDVFPELRKQ 345

Query: 420 EAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ---GKVLSGQDAFILWDTYGFPLDLT 476
           +  + +II AEE SF  TL +GIE F +  + V+      ++G+DAF L+DTYGFP DLT
Sbjct: 346 QETVSKIIRAEEESFIVTLDRGIEIFNEVIEQVRSANSTTITGEDAFKLYDTYGFPFDLT 405

Query: 477 QLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDS 536
           +LMA + G  VD EGF + M + + R+R+ + ++               H+      DD 
Sbjct: 406 RLMASDVGFSVDGEGFEHCMQQQKTRARTDRKEK---------------HQ----VQDDG 446

Query: 537 FKFIWFQDHKSVIKAIYTGSEFIES--VVPG-----NEVGIVLASSSFYAEQGGQIFDEG 589
            +++WF D   V ++ + G + +E   ++ G      ++ +VL  + FYAE GGQ+ D G
Sbjct: 447 SQWLWFSD---VHRSEFAGYDQLEMPVLITGIKHLQGKLLLVLDRTPFYAESGGQVGDRG 503

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGR-----FSVGE------EVICKVDYDR- 637
           +IE       V +    G  ++H+  +TE   +      SV +      E+  +   DR 
Sbjct: 504 WIESATYRLQVSDTIKDGDAIVHL--VTEAFDKILDTPISVDDLQLDEKELSAEASVDRH 561

Query: 638 -RKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESI 696
            R+    NHT TH+++ ALR +LG HV QKGS V  E+LRFDFSH   +    +  +E+ 
Sbjct: 562 LRQDTECNHTATHLMHSALRRILGQHVQQKGSYVNAERLRFDFSHFSRMTEAEIEAVEAD 621

Query: 697 VNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEW 756
           VN+ I+    V      L +     G  A FG+ Y D VRV+ I                
Sbjct: 622 VNDHIRRAEPVQKHADVLYDDAIAMGALAFFGDKYADRVRVIEIP--------------- 666

Query: 757 LSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVD 816
             IS ELCGGTH  N      F ++SE  +A G+RRI A+T   A K         ++V 
Sbjct: 667 -GISVELCGGTHADNIGRIGLFKIVSESSVASGVRRIEALTGKAAEKLLWKEYHELQQVR 725

Query: 817 DASKIEGS--LLEKNQVRKAQKKVAEENLQKA---VKVATETAEAAASNGKPFC--ISRV 869
              K +G   +LEK       KK  E+ L  +     V + TAE  AS     C  +++V
Sbjct: 726 HLLKAKGDEPVLEKIVALMDAKKELEKELSGSRVGSLVTSLTAELDASPDISGCRVMTKV 785

Query: 870 EVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTA 929
              +D   +R+A L + +Q      +  + E    A+V     +K+ +   ++  + +  
Sbjct: 786 LEEVDGDTLRQAALALRDQATSVAGLLCSVEDGKIALVSFA-SDKAVREFGIDAGKLIRE 844

Query: 930 ALQPLKGRCGKGKGGLASGQGTDAAQVTPAMD 961
           A Q + G  G GK   A+  G +   +  A D
Sbjct: 845 AAQCVHG-GGGGKPEFATAGGKNPEGIQKAFD 875


>gi|15803211|ref|NP_289243.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EDL933]
 gi|12517136|gb|AAG57801.1|AE005498_2 alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EDL933]
          Length = 878

 Score =  600 bits (1548), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 361/921 (39%), Positives = 515/921 (55%), Gaps = 91/921 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  K +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + ++++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   SF V + Q YG  + HIG L   AG   VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGANFSFVVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A G+RRI AVT   A     A      EV         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAITTVHADSDRLSEVAHLLKGDSNN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            A K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTDAAQVT 957
           + G G+  +A   GT    +T
Sbjct: 842 K-GGGRPDMAQAGGTGCCGLT 861


>gi|59711143|ref|YP_203919.1| alanyl-tRNA synthetase [Vibrio fischeri ES114]
 gi|71657966|sp|Q5E7G5.1|SYA_VIBF1 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|59479244|gb|AAW85031.1| alanyl-tRNA synthetase [Vibrio fischeri ES114]
          Length = 859

 Score =  600 bits (1548), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 364/913 (39%), Positives = 521/913 (57%), Gaps = 85/913 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG+   N      TR
Sbjct: 7   EIRRAFLAFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGSEKRN-----YTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI++AWE LT+   L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKQDAIKYAWEFLTERLEL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFWEMGD 232
           PADRL  T +          D+EA +IW K +  PA R++  G         DNFW+MGD
Sbjct: 122 PADRLLVTVY--------ETDDEAFEIWNKEMGIPADRIVRIGDNKGAPYASDNFWQMGD 173

Query: 233 TGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           TGPCGPC+EI YD      G R        D    IEIWN VF+QFNR +DG+++PLP  
Sbjct: 174 TGPCGPCTEIFYDHGEHIWGGRPGTP--EEDGDRFIEIWNNVFMQFNRHADGTMEPLPKP 231

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ +I+Q   SNY+ D+F  +   I++A         +G DD    + + R
Sbjct: 232 SVDTGMGIERIAAIMQGVHSNYEIDIFQTL---IKEAAKV------IGYDDLS--NQSLR 280

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           VVADHIR+ S+ I DG  P NEGR YVLRRI+RRAVR+G++ L A+  +F  LV  + ++
Sbjct: 281 VVADHIRSCSYLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAKGSYFYKLVGPLAEI 339

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    ELK+++A + +++  EE +FG+TL +G+    +A  +++G VL G+  F L+DT
Sbjct: 340 MGTAGEELKKQQALVEKVLKIEEENFGRTLERGMAILNEALDNLEGTVLDGETVFKLYDT 399

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP DLT  +A ER L +D +GF  AM+E R+R+R A      G    D +A   +   
Sbjct: 400 YGFPADLTNDVARERELTIDEDGFEKAMEEQRQRAREA------GQFGTDYNAVIKVESE 453

Query: 529 GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDE 588
            V    DS       + K+ + A++   E ++++  G++  ++L  + FYAE GGQ  D 
Sbjct: 454 TVFHGYDS------TEAKASVVALFREGEEVDALSAGDDAILILDQTPFYAESGGQCGDA 507

Query: 589 GFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
           G I    G F V +    G  + H G L EG    S  +  + +VD  RR  I  NH+ T
Sbjct: 508 GIITVETGKFVVTDTHKIGNAIGHHGKLVEGV--LSKADHAMAQVDETRRAAIILNHSAT 565

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+L+ ALR+VLG+HV QKGS+V  E LRFDFSH + V  E LR++E IVN+QI+    + 
Sbjct: 566 HLLHAALRQVLGEHVTQKGSLVKAENLRFDFSHLEAVKAEELRQVERIVNQQIRLNHTIE 625

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
           +    +  AK   G  A+FGE Y D VRV+++G                  S ELCGG H
Sbjct: 626 TDLMDIDAAKE-KGAMALFGEKYDDEVRVLSMG----------------EFSTELCGGIH 668

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAAC-SLEKEVDDASKIEGSLLE 827
            S+T +   F + SE GIA GIRRI AVT   A  A EA   + +K++++A+  +   LE
Sbjct: 669 ASSTGDIGLFKITSEGGIAAGIRRIEAVTGEAALDAIEAQQKAADKKLNEAAS-KAKQLE 727

Query: 828 KNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIE 887
           K ++++ + K+A +     +    E A      G    +++++ G +  A+R  V ++  
Sbjct: 728 K-EIQQLKDKLASQESASLINKVQEIA------GTKVLVAQLD-GAENKALRGMVDELKN 779

Query: 888 QKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLAS 947
           Q G  +++   + +  K  + AGV +  D   Q++  E +    Q + G+ G G+  +A 
Sbjct: 780 QIGSGIIMLG-NVSEGKVGLIAGVTK--DLIGQVKAGELVNMVAQQVGGKGG-GRPDMAQ 835

Query: 948 GQGTDAAQVTPAM 960
             GTDA  +  A+
Sbjct: 836 AGGTDAEALPNAL 848


>gi|283786756|ref|YP_003366621.1| alanyl-tRNA synthetase [Citrobacter rodentium ICC168]
 gi|282950210|emb|CBG89846.1| alanyl-tRNA synthetase [Citrobacter rodentium ICC168]
          Length = 875

 Score =  600 bits (1548), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 355/913 (38%), Positives = 511/913 (55%), Gaps = 85/913 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT    +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQYAWELLTGENWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P +R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ETDDEAYEIWEKEVGIPRARIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHVWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  + DA+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIDAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F +ADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  +++V
Sbjct: 283 VIADHIRSCAFLVADGVVPSNENRGYVLRRIIRRAVRHGN-MLGAKEAFFYKLVGPLIEV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    ELK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEELKRQQALVEQVLKTEEEQFARTLERGLALLDEELAKLTGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A    A    ++  D+ +     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAMIRVDSAS----- 456

Query: 529 GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDE 588
                   FK     +    + A++   + +E++  G +  +VL  + FYAE GGQ+ D 
Sbjct: 457 -------EFKGYEHLELNGKVTALFVDGKAVEAINAGQQAVVVLDQTPFYAESGGQVGDT 509

Query: 589 GFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
           G ++G   +F V + Q YG  + HIG+L+  AG   VG+ V   VD  RR  I  NH+ T
Sbjct: 510 GELKGAGFTFAVSDTQKYGQAIGHIGTLS--AGSLKVGDAVQADVDEARRARIRLNHSAT 567

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+++ ALR+VLG HV QKGS+V  + LRFDFSH + + P  +R +E +VN QI+  L V 
Sbjct: 568 HLMHAALRQVLGTHVAQKGSLVNDKLLRFDFSHNEAMKPSEIRAVEDLVNAQIRRNLPVE 627

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
           +    L  AK   G  A+FGE Y + VRV+++G                  S ELCGGTH
Sbjct: 628 TNVMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCGGTH 670

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------DDAS 819
            S T +   F ++SE G A G+RRI AVT   A     A      E+         +   
Sbjct: 671 ASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAMATVHAQSDRLNEIAHLLKGDSQNLGD 730

Query: 820 KIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVR 879
           K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S +  G++   +R
Sbjct: 731 KVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAVDINGVKLLVSEL-AGVEPKMLR 787

Query: 880 EAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCG 939
             V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G+ G
Sbjct: 788 TMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELVGMVAQQVGGKGG 844

Query: 940 KGKGGLASGQGTD 952
            G+  +A   GTD
Sbjct: 845 -GRPDMAQAGGTD 856


>gi|336403938|ref|ZP_08584643.1| alanyl-tRNA synthetase [Bacteroides sp. 1_1_30]
 gi|335944102|gb|EGN05927.1| alanyl-tRNA synthetase [Bacteroides sp. 1_1_30]
          Length = 872

 Score =  600 bits (1547), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 345/809 (42%), Positives = 470/809 (58%), Gaps = 69/809 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++RD+F  FFE K H    S+P+V  +DPTL+F NAGMNQ+K I LG        +K 
Sbjct: 4   AKEIRDSFKNFFESKGHHIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGN-----HPAKY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWE L +V 
Sbjct: 59  QRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAWEYLVEVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +L  + LYAT F G  + GL+ D+EA   W +FLP   ++     DNFWEMGDTGPCGPC
Sbjct: 119 KLNPEHLYATVFEGSPEEGLSRDDEAASYWEQFLPKDHIINGNKHDNFWEMGDTGPCGPC 178

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + A      LVN+D P  IEIWN+VF+Q+NR++DGSL+PLPAK +DTG+
Sbjct: 179 SEIHIDLRPAEERAKISGRDLVNHDHPQVIEIWNLVFMQYNRKADGSLEPLPAKVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF P+  AI   +G      + G D   + D+A RV+ADHI
Sbjct: 239 GFERLCMALQGKTSNYDTDVFQPMLKAIATMSGT-----EYGKD--KQQDIAMRVIADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++F+I DG  P N    YV+RRILRRAVRYG   L  +  F   L+ +++  MG+ +P
Sbjct: 292 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLIDNMGEAYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ--GKV-LSGQDAFILWDTYGF 471
           EL  ++  I ++I  EE SF +TL  GI    K  +D +  GK  +SG+DAF L+DT+GF
Sbjct: 352 ELVAQKTLIEKVIKEEEESFLRTLETGIRLLDKTMEDTKANGKTEISGKDAFTLYDTFGF 411

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E G+ V+IE FN  M + ++R+R+A   + G  IV+    T  +   G  
Sbjct: 412 PLDLTELILRENGMTVNIEEFNEEMQQQKQRARNAAAIETGDWIVLKEGTTEFV---GYD 468

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            T+     + ++  K   + +Y                IVL  + FYAE GGQ+ D G +
Sbjct: 469 YTEYEASILRYRQIKQKNQTLYQ---------------IVLDYTPFYAESGGQVGDTGVL 513

Query: 592 EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHML 651
              F +  V + +      IHI   T+          + C VD D+R   A NH+ TH+L
Sbjct: 514 VSEFETIEVVDTKKENNLPIHI---TKKLPEHPEAPMMAC-VDTDKRAACAANHSATHLL 569

Query: 652 NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS-K 710
           + ALREVLG+H++QKGS+V P+ LRFDFSH + V  E +R++E IVN +I+A + +   +
Sbjct: 570 DAALREVLGEHIEQKGSLVTPDSLRFDFSHFQKVTDEEIRKVEHIVNARIRANIPLKEYR 629

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
              + EAK +  + A+FGE Y D VRV+  G                  S E CGGTH++
Sbjct: 630 NIPIEEAKELGAI-ALFGEKYGDRVRVIQFG-----------------TSIEFCGGTHVA 671

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKNQ 830
            T       ++SE  +A G+RRI       AY        L+   D  S ++        
Sbjct: 672 ATGNIGMVKIISESSVAAGVRRIE------AYTGARVEEMLDTIQDTLSDLKALFNNAPD 725

Query: 831 VRKAQKKVAEEN--LQKAVKVATETAEAA 857
           +R A +K  +EN  L+K V+   +  EAA
Sbjct: 726 LRIAIRKYLDENAGLKKQVEDFMKEKEAA 754


>gi|423294739|ref|ZP_17272866.1| alanyl-tRNA synthetase [Bacteroides ovatus CL03T12C18]
 gi|392675930|gb|EIY69371.1| alanyl-tRNA synthetase [Bacteroides ovatus CL03T12C18]
          Length = 872

 Score =  600 bits (1547), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 332/747 (44%), Positives = 447/747 (59%), Gaps = 61/747 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++RD+F  FFE K H    S+P+V  +DPTL+F NAGMNQ+K I LG        +K 
Sbjct: 4   AKEIRDSFKNFFESKGHHIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGN-----HPAKY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWE L +V 
Sbjct: 59  QRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAINWAWEYLVEVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +L  + LYAT F G  + GL+ D+EA   W +FLP   ++     DNFWEMGDTGPCGPC
Sbjct: 119 KLNPEHLYATVFEGSPEEGLSRDDEAASYWEQFLPKDHIINGNKHDNFWEMGDTGPCGPC 178

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + A      LVN+D P  IEIWN+VF+Q+NR++DGSL+PLPAK +DTG+
Sbjct: 179 SEIHIDLRPAEERAKISGRDLVNHDHPQVIEIWNLVFMQYNRKADGSLEPLPAKVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF P+  AI   +G      + G D   + D+A RV+ADHI
Sbjct: 239 GFERLCMALQGKTSNYDTDVFQPMLKAIAAMSGT-----EYGKD--KQQDIAMRVIADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++F+I DG  P N    YV+RRILRRAVRYG   L  +  F   L+ +++  MG+ +P
Sbjct: 292 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLIDNMGEAYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ--GKV-LSGQDAFILWDTYGF 471
           EL  ++  I ++I  EE SF +TL  GI    K  +D +  GK  +SG+DAF L+DT+GF
Sbjct: 352 ELVAQKTLIEKVIKEEEESFLRTLETGIRLLDKTMEDTKANGKTEISGKDAFTLYDTFGF 411

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E G+ V+IE FN  M + ++R+R+A   + G  IV+    T  +   G  
Sbjct: 412 PLDLTELILRENGMTVNIEEFNEEMQQQKQRARNAAAIETGDWIVLKEGTTEFV---GYD 468

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            T+     + ++  K   + +Y                IVL  + FYAE GGQ+ D G +
Sbjct: 469 YTEYEASILRYRQIKQKNQTLYQ---------------IVLDYTPFYAESGGQVGDTGVL 513

Query: 592 EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHML 651
              F +  V + +      IHI   T+          + C VD D+R   A NH+ TH+L
Sbjct: 514 VSEFETIEVVDTKKENNLPIHI---TKKLPEHPEAPMMAC-VDTDKRAACAANHSATHLL 569

Query: 652 NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS-K 710
           + ALREVLG+H++QKGS+V P+ LRFDFSH + V  E +R++E IVN +I+A + +   +
Sbjct: 570 DAALREVLGEHIEQKGSLVTPDSLRFDFSHFQKVTDEEIRKVEHIVNARIRANIPLKEYR 629

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
              + EAK +  + A+FGE Y D VRV+  G                  S E CGGTH++
Sbjct: 630 NIPIEEAKELGAI-ALFGEKYGDRVRVIQFG-----------------TSIEFCGGTHVA 671

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVT 797
            T       ++SE  +A GIRRI A T
Sbjct: 672 ATGNIGMVKIISESSVAAGIRRIEAYT 698


>gi|163754032|ref|ZP_02161155.1| hypothetical protein KAOT1_20457 [Kordia algicida OT-1]
 gi|161326246|gb|EDP97572.1| hypothetical protein KAOT1_20457 [Kordia algicida OT-1]
          Length = 870

 Score =  600 bits (1547), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 331/741 (44%), Positives = 439/741 (59%), Gaps = 55/741 (7%)

Query: 63  VRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRA 122
           +R  F +FF+ K H    S+P+V  NDPTL+F N+GM  +K  FLG   P     K  R 
Sbjct: 6   IRAKFLEFFKSKTHQIVPSAPMVTKNDPTLMFVNSGMAPFKEYFLGNGTP-----KSNRI 60

Query: 123 CNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLP 182
            +TQKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWELLT+VY + 
Sbjct: 61  ADTQKCLRVSGKHNDLEEVGYDTYHHTMFEMLGNWSFGDYFKKEAITWAWELLTEVYGID 120

Query: 183 ADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPCSEI 242
            D LY T F G ++ GL  D EA D+W + +P  R+L     DNFWEMG+ GPCGPCSEI
Sbjct: 121 KDILYVTVFEGSDEDGLKLDQEAYDLWKEIVPEERILMGNKADNFWEMGEQGPCGPCSEI 180

Query: 243 HYD-RTGNRDA----ASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFE 297
           H D R+    A    A LVN D P  +EIWN+VF+Q+NR++D SL+ LPA+HVDTG+GFE
Sbjct: 181 HVDIRSEEEKAKIPGADLVNMDHPQVVEIWNLVFMQYNRKADKSLEKLPAQHVDTGMGFE 240

Query: 298 RLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTL 357
           RL  +LQ+  SNYDTDVF P+   I+  T       K G +  +KVD+A RV+ADH+R +
Sbjct: 241 RLCMVLQDVKSNYDTDVFTPLIREIETITNV-----KYGTN--EKVDVAIRVIADHVRAV 293

Query: 358 SFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELK 417
           SF+IADG  P N  R YV+RRILRRAVRYG   L  ++ F   LV+++   MG  FPELK
Sbjct: 294 SFSIADGQLPSNNTRGYVIRRILRRAVRYGFTFLNKKEPFIYRLVDVLDNKMGKAFPELK 353

Query: 418 QREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQ 477
           +++  I+ +I  EE SF +TL +G+    +  ++V GKV+SG+  F L DTYGFP DLT+
Sbjct: 354 EQKQLIQNVIKEEEQSFLRTLDQGLVLLDRVIENVNGKVVSGKKVFELKDTYGFPEDLTE 413

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSF 537
           L+  ERGL  + E F+ A+   +E  R A   QA   +V+  D         +L  D   
Sbjct: 414 LILRERGLTYNEEEFDAALKIQQEGGRKATAIQADDWVVLLEDEEEEFVGYDLLEVDVRL 473

Query: 538 KFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFGS 597
                           T    IE+   G +  +V   + FY E GGQ+ D+G++E   G 
Sbjct: 474 ----------------TRYRKIETKKEGVQYQLVFNMTPFYPEGGGQVGDKGYVETSNGD 517

Query: 598 -FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALR 656
             YV + +     +IHI   T+   +  + E +   VD  +R+  A NHT TH+L+ ALR
Sbjct: 518 VIYVLDTKKENNLIIHI---TKNLPK-KLNEPLRAVVDKKQRERTAANHTATHLLHQALR 573

Query: 657 EVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAE 716
           E+LG HV+QKGS V  + LRFDFSH   +  E LR +E+ VN +I+ +L +  K     E
Sbjct: 574 EILGTHVEQKGSAVHSKYLRFDFSHFSKLTVEELRDVENFVNSRIEGKLPLEEKRNRPVE 633

Query: 717 AKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAE 776
               +G  A+FGE Y D VR +  G+                 S ELCGGTH+ NT +  
Sbjct: 634 EALADGALALFGEKYGDTVRSIRFGK-----------------SIELCGGTHVQNTADIW 676

Query: 777 AFALLSEEGIAKGIRRITAVT 797
            F + SE  +A GIRRI A+T
Sbjct: 677 HFKIKSEGAVAAGIRRIEAIT 697


>gi|432373270|ref|ZP_19616308.1| alanyl-tRNA synthetase [Escherichia coli KTE11]
 gi|430895276|gb|ELC17547.1| alanyl-tRNA synthetase [Escherichia coli KTE11]
          Length = 876

 Score =  600 bits (1547), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 360/916 (39%), Positives = 512/916 (55%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  K +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSAEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQALVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + ++++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   SF V + Q YG  + HIG L   AG   VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGASFSFAVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F + SE G A G+RRI AVT   A     A      EV         +
Sbjct: 668 GTHASRTGDIGLFRITSESGTAAGVRRIEAVTGEGAITTVHADSDRLSEVAHLLKGDSNN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
              K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LVDKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|416550929|ref|ZP_11756255.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 29N]
 gi|363567994|gb|EHL51990.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 29N]
          Length = 876

 Score =  600 bits (1547), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 357/916 (38%), Positives = 515/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT    +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  + +A+ + TGA     K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIEAVAKVTGATDLGNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F +ADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  +++V
Sbjct: 283 VIADHIRSCAFLVADGVLPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIEV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    ELK+++A + +++  EE  F +TL +G+    +    +QG  L G+ AF L+DT
Sbjct: 342 MGSAGEELKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + +E++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKVVEAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   +F V + Q YG  + HIG L+ GA    VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGAGFTFAVDDTQKYGQAIGHIGKLSAGA--LKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + P  +R++E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVAQKGSLVSDKVLRFDFSHNEAMKPSEIRQVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLDAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A GIRRI AVT   A     A      ++         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGIRRIEAVTGEGAMATVHAQSDRLNDIAHLLKGDSQN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
              K+   L    Q+ K  +++ ++    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LGDKVRAVLERTRQLEKELQQLKDQ--AAAQESANLSSKAVDLNGVKLLVSEL-AGIEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  V+V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTVIVLAT-VVEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|432398599|ref|ZP_19641377.1| alanyl-tRNA synthetase [Escherichia coli KTE25]
 gi|432724119|ref|ZP_19959035.1| alanyl-tRNA synthetase [Escherichia coli KTE17]
 gi|432728701|ref|ZP_19963577.1| alanyl-tRNA synthetase [Escherichia coli KTE18]
 gi|432742385|ref|ZP_19977102.1| alanyl-tRNA synthetase [Escherichia coli KTE23]
 gi|432991750|ref|ZP_20180413.1| alanyl-tRNA synthetase [Escherichia coli KTE217]
 gi|433111885|ref|ZP_20297744.1| alanyl-tRNA synthetase [Escherichia coli KTE150]
 gi|430914177|gb|ELC35280.1| alanyl-tRNA synthetase [Escherichia coli KTE25]
 gi|431264373|gb|ELF56087.1| alanyl-tRNA synthetase [Escherichia coli KTE17]
 gi|431272266|gb|ELF63373.1| alanyl-tRNA synthetase [Escherichia coli KTE18]
 gi|431282618|gb|ELF73497.1| alanyl-tRNA synthetase [Escherichia coli KTE23]
 gi|431493892|gb|ELH73483.1| alanyl-tRNA synthetase [Escherichia coli KTE217]
 gi|431626921|gb|ELI95333.1| alanyl-tRNA synthetase [Escherichia coli KTE150]
          Length = 876

 Score =  600 bits (1547), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 360/916 (39%), Positives = 513/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  K +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFCKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + ++++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKSVDAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   SF V + Q YG  + HIG L    G   VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--VGSLKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A G+RRI AVT   A     A      EV         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATVHADSDRLSEVAHLLKGDSNN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            A K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|433169638|ref|ZP_20354261.1| alanyl-tRNA synthetase [Escherichia coli KTE180]
 gi|431685914|gb|ELJ51480.1| alanyl-tRNA synthetase [Escherichia coli KTE180]
          Length = 876

 Score =  600 bits (1547), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 360/916 (39%), Positives = 514/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  K +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNESRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD   F+ AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEACFDAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + ++++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   SF V + Q YG  + HIG L   AG   VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A G+RRI AVT   A     A      EV         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATVHADSDRLSEVAHLLKGDSNN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            A K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|78188347|ref|YP_378685.1| alanyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
 gi|123580381|sp|Q3ATN3.1|SYA_CHLCH RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|78170546|gb|ABB27642.1| alanyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
          Length = 886

 Score =  600 bits (1547), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 367/891 (41%), Positives = 499/891 (56%), Gaps = 98/891 (10%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R +F  FF  K H   +S+PV+P +DPTLLF NAGMNQ+K +FL             R
Sbjct: 5   EIRQSFLDFFAQKGHTIVRSAPVIPADDPTLLFTNAGMNQFKDVFLDKGS-----RPYVR 59

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A +TQKCIRA GKHNDL+DVG+DTYHHTFFEMLGNWSFGDY+K EAI WAWEL T V++L
Sbjct: 60  AADTQKCIRASGKHNDLEDVGRDTYHHTFFEMLGNWSFGDYYKLEAITWAWELFTVVWKL 119

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLKF--LPASRVLPFGCKDNFWEMGDTGPCGPC 239
           P +RLYAT +          D+E+  IW +   +    +L FG KDNFWEMG+TGPCGPC
Sbjct: 120 PKERLYATVY--------QDDDESFQIWKEQTDINPDHILRFGDKDNFWEMGETGPCGPC 171

Query: 240 SEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERL 299
           SEIH D T +     LVN  D   IE+WN+VFIQ+NR+SDG L+PLP KHVDTG+GFER+
Sbjct: 172 SEIHIDLTPDGSGKELVNVGDYRVIELWNLVFIQYNRQSDGHLEPLPKKHVDTGMGFERI 231

Query: 300 TSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSF 359
            +++Q K SNYD+DVF P+FD I + TG R Y   + A +    D+A RV+ADH RTL+F
Sbjct: 232 VAVMQGKGSNYDSDVFQPLFDKITEITGVR-YGASLDAPN----DIAMRVIADHARTLTF 286

Query: 360 AIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQR 419
           A++DG+ P NEGR YVLRRILRRA+RY S  L       + LV  +   MG+VFPEL QR
Sbjct: 287 ALSDGAMPSNEGRGYVLRRILRRALRY-SRNLGYHQPILHQLVGTLALAMGEVFPELVQR 345

Query: 420 EAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ---GKVLSGQDAFILWDTYGFPLDLT 476
           +  +  II AEE SF  TL +GI+ F +  + ++   GKV++G DAF L+DTYGFP DLT
Sbjct: 346 QEAVSAIIKAEEESFIVTLDRGIDLFSELVEKLRASNGKVIAGSDAFRLYDTYGFPFDLT 405

Query: 477 QLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDS 536
           +LMA + G  VD EGF + M E + R+RS + ++                       DD 
Sbjct: 406 RLMAADEGFEVDGEGFEHCMQEQKNRARSDRREKQ-------------------RVDDDG 446

Query: 537 FKFIWFQDHKSVIKAIY---TGSEFIESVVPGN-EVGIVLASSSFYAEQGGQIFDEGFIE 592
            K+ WF D ++     Y     S  I  +  GN ++ +VL ++ FYAE GGQ  D G++E
Sbjct: 447 AKWQWFSDVRASQFVGYDHLVHSATITGIRQGNGKLLLVLDATPFYAESGGQTGDNGWLE 506

Query: 593 GLFGSFYVRNVQIYGGFVIHI---------GSLTEGAGRFSVGEEVICKVDYDR--RKLI 641
                 +V +    G  ++H+          S  +      V +E+       R  R+  
Sbjct: 507 NSRYRLHVADTVKDGDAIVHVVSDAFDKVQDSAVQPEDVEIVEQELAVAASVHRTARQDA 566

Query: 642 APNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQI 701
             NHT TH+++ ALR +LG+HV QKGS V PE+LRFDFSH   +  E +  +E  VN QI
Sbjct: 567 ERNHTATHLMHAALRRILGEHVQQKGSFVSPERLRFDFSHFSKLTDEEIEAVEIAVNTQI 626

Query: 702 KAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISA 761
           +    V      L +     G  A FG+ Y D VRVV I                  +S 
Sbjct: 627 REAEPVVKHADVLFDDAVAKGALAFFGDKYADRVRVVEIP----------------GMSV 670

Query: 762 ELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLA-------YKAFEAACSLEKE 814
           ELCGGTH+ N      F ++SE  +A G+RRI AVT   A       Y+  +    L K 
Sbjct: 671 ELCGGTHVDNIGRIGLFKIISEASVASGVRRIEAVTGKAAEKLLWQEYRELQQIRQLLKA 730

Query: 815 VDDASKIEGSLLEKNQVRKAQKKVAE-------ENLQKAVKVATETA-------EAAASN 860
             D + +E      +  ++ +K++AE       E L  A++ A E +       E   ++
Sbjct: 731 KGDEAVVEKVAGLMDSKKELEKELAESRAAALVEQLTAALQAAPEVSGCRVLAIEVKNND 790

Query: 861 GKPFCISRVEVGL-DAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAG 910
           G+   + +  + L D A     +L  +E   + ++ F+TDE      + AG
Sbjct: 791 GE--TMRQATMALRDKAPCAVGLLATVEAGKVVLVSFATDEAVRTCSLDAG 839


>gi|443242017|ref|YP_007375242.1| alanyl-tRNA synthetase [Nonlabens dokdonensis DSW-6]
 gi|442799416|gb|AGC75221.1| alanyl-tRNA synthetase [Nonlabens dokdonensis DSW-6]
          Length = 907

 Score =  600 bits (1547), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 355/855 (41%), Positives = 469/855 (54%), Gaps = 83/855 (9%)

Query: 55  VVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNT 114
           V    + ++R TF  FFE+K H    S+P+V  NDPTL+F NAGMNQ+K  FLG +DP  
Sbjct: 31  VARMKSKQIRQTFLDFFENKKHQIVASAPMVIKNDPTLMFTNAGMNQFKEYFLGNSDP-- 88

Query: 115 QLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWEL 174
              K  R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWEL
Sbjct: 89  ---KNNRVADSQKCLRVSGKHNDLEEVGVDTYHHTMFEMLGNWSFGDYFKKEAIAWAWEL 145

Query: 175 LTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTG 234
           LT+VY +  D LY T F GD+   L  D EA D W + +   R+L     DNFWEMG  G
Sbjct: 146 LTEVYGIDKDCLYVTIFEGDKSENLNRDTEAYDYWKELIAEDRILNGNKADNFWEMGAQG 205

Query: 235 PCGPCSEIHYDRTGNR-----DAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKH 289
           PCGPCSEIH D   +      D A+LVN D P  +EIWN+VF+Q+NR +DG+LK LPA+H
Sbjct: 206 PCGPCSEIHVDIRSDEEKAKVDGATLVNMDHPQVVEIWNLVFMQYNRMADGNLKNLPAQH 265

Query: 290 VDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRV 349
           VDTG+GFERL  +LQN  SNYDTDVF P+   I+  TG   Y GK      ++ D+A RV
Sbjct: 266 VDTGMGFERLAMVLQNVQSNYDTDVFTPLIREIETITG-HSY-GKT-----EQEDIAIRV 318

Query: 350 VADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVM 409
           +ADH+R +SF+IADG  P N G  YV+R ILRRA+RYG   L  ++ F   LVN + K M
Sbjct: 319 IADHLRAVSFSIADGQLPSNNGAGYVIRMILRRAIRYGFTYLGKKEPFIYQLVNTLSKQM 378

Query: 410 GDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG---KVLSGQDAFILW 466
           GD FPELK ++  I  +I  EEASF +TL  G+         ++     VL G+ AF L 
Sbjct: 379 GDAFPELKSQKNLILNVIKEEEASFLRTLENGLALLDSMVASMKNDGVTVLDGKKAFELN 438

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFP +LT+L+  E GL +D +GF  A+ + +E SR A   +      +  D T    
Sbjct: 439 DTYGFPKELTRLILSEHGLQMDEDGFAKALKKQQEGSRKASATETSDWTTLREDDTQEFV 498

Query: 527 KRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
               L+ D     +    ++ V+           S   G    IV   + FY E GGQ  
Sbjct: 499 GYDRLSGD-----VRISKYRKVV-----------SKKDGELYQIVFNMTPFYGESGGQTG 542

Query: 587 DEGFIEGLFG-SFYVRNVQIYGGFVIHIGS--LTEGAGRFSVGEEVICKVDYDRRKLIAP 643
           D+G+IE   G + Y+ + +   G  +H+      E  G F V       VD  +R   A 
Sbjct: 543 DKGYIESASGDTVYIIDTKKENGQTVHLTKNLPKELDGPFKV------TVDAHQRARTAA 596

Query: 644 NHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKA 703
           NHT TH+L+ ALR++LG HV+QKGS+V    LRFDFSH   V  E L  IE+ VN +I+ 
Sbjct: 597 NHTATHLLHQALRKILGTHVEQKGSMVRSASLRFDFSHFSKVTKEELVEIENFVNARIRE 656

Query: 704 ELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAEL 763
           +L +        +     G   +FGE Y D VR +  G                  S EL
Sbjct: 657 QLPLEENRNNTYDQAIAEGAIGLFGEKYGDVVRTIKFGE-----------------SQEL 699

Query: 764 CGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACS---------LEKE 814
           CGGTH+ NT +   F + +E  +A GIRRI A+T+  A K F A  S         L+  
Sbjct: 700 CGGTHVKNTADIWHFKITNETAVASGIRRIEAITSD-AVKDFFAEQSKSFEEIKEILKNP 758

Query: 815 VDDASKIEGSLLEKNQVRKAQ----KKVAEENLQKAVKVATETAEAAASNGKPFCISRVE 870
               ++   +L E+N   K +    KK    NL+  +  +T+       NG  F  S+ +
Sbjct: 759 TKSPAESIAALQEENNALKKEIEQLKKAKAGNLKGDLIDSTQLI-----NGVNFISSKTD 813

Query: 871 VGLDAAAVREAVLKV 885
             LD  +V+E    +
Sbjct: 814 --LDTKSVKELAFDI 826


>gi|340621084|ref|YP_004739535.1| Alanine--tRNA ligase [Capnocytophaga canimorsus Cc5]
 gi|339901349|gb|AEK22428.1| Alanine--tRNA ligase [Capnocytophaga canimorsus Cc5]
          Length = 878

 Score =  600 bits (1547), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 359/920 (39%), Positives = 516/920 (56%), Gaps = 59/920 (6%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R  F KFFE K H+   S+P+V  NDPTL+F NAGMNQ+K  FLG   P ++    
Sbjct: 3   SQEIRREFLKFFEGKGHLIVPSAPMVIKNDPTLMFTNAGMNQFKEYFLGNGKPKSK---- 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  +TQKC+R  GKHNDL++VGKDTYHHT FEMLGNWSFGDYFK EAI WAWELLT+VY
Sbjct: 59  -RIADTQKCLRVSGKHNDLEEVGKDTYHHTMFEMLGNWSFGDYFKKEAIAWAWELLTEVY 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           ++P   LY T F G ++  +  D E+ DIW   +   R+L    KDNFWEMGD GPCGPC
Sbjct: 118 KIPKKNLYVTVFEGSKEDNVPFDQESFDIWKGLIAEDRILLGNKKDNFWEMGDQGPCGPC 177

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           +EIH D     + +      LVN D P  IEIWN VF++FNR++DGSL+ LPA+HVDTG+
Sbjct: 178 TEIHVDLRSESEKSKISGRDLVNQDHPQVIEIWNNVFMEFNRKADGSLEKLPAQHVDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL  +LQ   SNYDTDVF PI   I++ T  +   G   + + D++++A RV+ADHI
Sbjct: 238 GFERLCMVLQGVQSNYDTDVFTPIIQRIEEITQHKYIKGNNVSAEEDQINIAIRVIADHI 297

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R +SFAIADG  P N G  YV+RRILRRA+RYG   L  ++ F   LV  +   MG+VFP
Sbjct: 298 RAVSFAIADGQLPSNNGAGYVIRRILRRAIRYGFTFLNQKEPFIYKLVETLALQMGEVFP 357

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLD 474
           E+++++  +  +I  EEASF +TL +G+        ++    LSG  AF L+DTYGFP+D
Sbjct: 358 EIEKQQVLVENVIKEEEASFLRTLEQGLLMLDVMINNISDNQLSGSKAFELYDTYGFPID 417

Query: 475 LTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATD 534
           LT L+  E+GL +D +GF   + + +ERSR+A   +A   +              +L  D
Sbjct: 418 LTALILSEKGLTLDEKGFEENLQKQKERSRAAAQVKADDWV--------------ILRDD 463

Query: 535 DSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGL 594
           +  +FI +   +++++ +      +ES   G    +V   + FY E GGQ  D+G ++  
Sbjct: 464 EEEEFIGYDTLEAIVRLVKYRK--VESQKDGTFYQLVFNVTPFYPEGGGQAGDKGTLQSA 521

Query: 595 FGSF-YVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNF 653
            G   Y+ + +     +IHI          ++ +    +V    R     NH+ TH+L+ 
Sbjct: 522 NGGITYIIDTKKENNLIIHISETLPD----NLNDPFKAEVHPLGRAFTQANHSATHLLHQ 577

Query: 654 ALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEAT 713
           ALREVLG HV+QKGS+V  + LRFDFSH + +  E +  IE  VNE+I+ ++D+      
Sbjct: 578 ALREVLGTHVEQKGSLVDLKHLRFDFSHFQKLTQEEITEIERRVNERIQQKIDLQEHRNI 637

Query: 714 LAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTR 773
             +     G  A+FGE Y D VR++  G                  S ELCGGTH+ NT 
Sbjct: 638 PIQQAMDAGAMALFGEKYGDKVRMIQFGE-----------------SKELCGGTHVKNTG 680

Query: 774 EAEAFALLSEEGIAKGIRRITAVT--TGLAY-KAFEAACS----LEKEVDDASKIEGSLL 826
           +   F +LSE  +A GIRRI A+T    LAY K  EA  +    L K   D  K   +L 
Sbjct: 681 DIWYFKILSEGAVASGIRRIEAITQEAALAYFKEQEAVVNRLRQLVKNTQDPLKAVENLQ 740

Query: 827 EKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVI 886
           E+N   + + ++ ++   K +K   +  E    NG  F   +  V LD A +++   ++ 
Sbjct: 741 EENNRLQKELEILKKEQAKNLKSNLKN-EFKEVNGIAFLSQK--VNLDIANLKDLAFQLG 797

Query: 887 EQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLA 946
            +     ++F +++   KA++   + +     K L+  + +   L       G G+   A
Sbjct: 798 NEVPNAFILFGSEQEDGKALLLCYISKDLVSEKGLDAGK-VVRELGKYIHGGGGGQPFFA 856

Query: 947 SGQGTDAAQVTPAMDLAAEF 966
           +  G + A +  A+  A EF
Sbjct: 857 TAGGKNPAGIDEALSKAIEF 876


>gi|262408299|ref|ZP_06084846.1| alanyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|294645925|ref|ZP_06723596.1| alanine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294805880|ref|ZP_06764750.1| alanine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
 gi|345512130|ref|ZP_08791667.1| alanyl-tRNA synthetase [Bacteroides sp. D1]
 gi|423212124|ref|ZP_17198653.1| alanyl-tRNA synthetase [Bacteroides xylanisolvens CL03T12C04]
 gi|262353851|gb|EEZ02944.1| alanyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|292638725|gb|EFF57072.1| alanine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294446909|gb|EFG15506.1| alanine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
 gi|295086606|emb|CBK68129.1| alanyl-tRNA synthetase [Bacteroides xylanisolvens XB1A]
 gi|345453941|gb|EEO51422.2| alanyl-tRNA synthetase [Bacteroides sp. D1]
 gi|392695012|gb|EIY88237.1| alanyl-tRNA synthetase [Bacteroides xylanisolvens CL03T12C04]
          Length = 872

 Score =  600 bits (1547), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 345/809 (42%), Positives = 470/809 (58%), Gaps = 69/809 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++RD+F  FFE K H    S+P+V  +DPTL+F NAGMNQ+K I LG        +K 
Sbjct: 4   AKEIRDSFKNFFESKGHHIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGN-----HPAKY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWE L +V 
Sbjct: 59  QRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAWEYLVEVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +L  + LYAT F G  + GL+ D+EA   W +FLP   ++     DNFWEMGDTGPCGPC
Sbjct: 119 KLNPEHLYATVFEGSPEEGLSRDDEAASYWEQFLPKDHIINGNKHDNFWEMGDTGPCGPC 178

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + A      LVN+D P  IEIWN+VF+Q+NR++DGSL+PLPAK +DTG+
Sbjct: 179 SEIHIDLRPAEERAKISGRDLVNHDHPQVIEIWNLVFMQYNRKADGSLEPLPAKVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF P+  AI   +G      + G D   + D+A RV+ADHI
Sbjct: 239 GFERLCMALQGKTSNYDTDVFQPMLKAIAAMSGT-----EYGKD--KQQDIAMRVIADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++F+I DG  P N    YV+RRILRRAVRYG   L  +  F   L+ +++  MG+ +P
Sbjct: 292 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLIDNMGEAYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ--GKV-LSGQDAFILWDTYGF 471
           EL  ++  I ++I  EE SF +TL  GI    K  +D +  GK  +SG+DAF L+DT+GF
Sbjct: 352 ELVAQKTLIEKVIKEEEESFLRTLETGIRLLDKTMEDTKANGKTEISGKDAFTLYDTFGF 411

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E G+ V+IE FN  M + ++R+R+A   + G  IV+    T  +   G  
Sbjct: 412 PLDLTELILRENGMTVNIEEFNEEMQQQKQRARNAAAIETGDWIVLKEGTTEFV---GYD 468

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            T+     + ++  K   + +Y                IVL  + FYAE GGQ+ D G +
Sbjct: 469 YTEYEASILRYRQIKQKNQTLYQ---------------IVLDYTPFYAESGGQVGDTGVL 513

Query: 592 EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHML 651
              F +  V + +      IHI   T+          + C VD D+R   A NH+ TH+L
Sbjct: 514 VSEFETIEVVDTKKENNLPIHI---TKKLPEHPEAPMMAC-VDTDKRAACAANHSATHLL 569

Query: 652 NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS-K 710
           + ALREVLG+H++QKGS+V P+ LRFDFSH + V  E +R++E IVN +I+A + +   +
Sbjct: 570 DAALREVLGEHIEQKGSLVTPDSLRFDFSHFQKVTDEEIRKVEHIVNARIRANIPLKEYR 629

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
              + EAK +  + A+FGE Y D VRV+  G                  S E CGGTH++
Sbjct: 630 NIPIEEAKELGAI-ALFGEKYGDRVRVIQFG-----------------TSIEFCGGTHVA 671

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKNQ 830
            T       ++SE  +A G+RRI       AY        L+   D  S ++        
Sbjct: 672 ATGNIGMVKIISESSVAAGVRRIE------AYTGARVEEMLDTIQDTLSDLKALFNNAPD 725

Query: 831 VRKAQKKVAEEN--LQKAVKVATETAEAA 857
           +R A +K  +EN  L+K V+   +  EAA
Sbjct: 726 LRIAIRKYLDENAGLKKQVEDFMKEKEAA 754


>gi|146299654|ref|YP_001194245.1| alanyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
 gi|205830093|sp|A5FIP9.1|SYA_FLAJ1 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|146154072|gb|ABQ04926.1| alanyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
          Length = 879

 Score =  600 bits (1547), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 338/768 (44%), Positives = 453/768 (58%), Gaps = 54/768 (7%)

Query: 63  VRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRA 122
           VR  F  FFE K H    S+P+V  +DPTL+F N+GM Q+K  FLG   P     K  R 
Sbjct: 6   VRKQFLDFFESKGHTIVPSAPIVLKDDPTLMFNNSGMAQFKEFFLGNGTP-----KSPRI 60

Query: 123 CNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLP 182
            +TQKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWELLT+VY++P
Sbjct: 61  ADTQKCLRVSGKHNDLEEVGIDTYHHTMFEMLGNWSFGDYFKKEAINWAWELLTEVYKIP 120

Query: 183 ADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPCSEI 242
            + LY + F G ++  +  D EA DIW   +   R++    KDNFWEMGD GPCGPCSEI
Sbjct: 121 KENLYVSVFEGSKEDNVPFDQEAWDIWKTLIDEDRIILGNKKDNFWEMGDQGPCGPCSEI 180

Query: 243 HYDRTGNRDAA-----SLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFE 297
           H D     + A     SLVNND P  +EIWN VF++FNR++DGSL+ LPA+HVDTG+GFE
Sbjct: 181 HVDLRSAEEKALVSGKSLVNNDHPQVVEIWNNVFMEFNRKADGSLEKLPAQHVDTGMGFE 240

Query: 298 RLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVG--ADDADKVDMAYRVVADHIR 355
           RL   LQ K SNYDTDVFMP+   I+  TGA+  +  V   +++ +K+++A RVVADH+R
Sbjct: 241 RLCMALQGKTSNYDTDVFMPLIREIETITGAKYTTNDVTGISEEQNKMNIAIRVVADHVR 300

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPE 415
            ++FAIADG  P N G  YV+RRILRRA+RYG   L  ++ F   LV  + + MGD FPE
Sbjct: 301 AVAFAIADGQLPSNTGAGYVIRRILRRAIRYGFTFLGTKEPFIYKLVETLSEQMGDSFPE 360

Query: 416 LKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDL 475
           ++ ++A    +I  EE SF KTL +G+        +  G  + G+ AF L+DTYGFP+DL
Sbjct: 361 IRTQKALCSNVIREEENSFLKTLDQGLILLDAVILNNTGDTIDGKKAFELYDTYGFPIDL 420

Query: 476 TQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDD 535
           T L+  ERGL +D EGF   +   +ERSR+A    AG                 V+  DD
Sbjct: 421 TALILSERGLKLDEEGFQEQLQLQKERSRAASKVTAG--------------DWNVIVEDD 466

Query: 536 SFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLF 595
             +F+ +      +K   T    +ESV  G    +V  ++ FY E GGQ  D+G++E   
Sbjct: 467 IQEFVGYDRLSQQVK--ITKYRRVESVKDGEIFQLVFNATPFYGESGGQTGDKGYLEAQN 524

Query: 596 GSF-YVRNVQIYGGFVIHIG-SLTEG-AGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLN 652
           G   Y+ + +      IH+  SL E   G F+        VD ++R   + NH+ TH+L+
Sbjct: 525 GDIVYIIDTKKENNQTIHLTQSLPENITGTFN------AVVDANQRAKTSSNHSATHLLH 578

Query: 653 FALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEA 712
             LR++LG H++QKGS+V    LRFDFSH   V  E L  +E+ VN +I+  L +  K A
Sbjct: 579 QGLRKILGTHIEQKGSMVRNASLRFDFSHFSKVTDEELLEVENFVNARIRESLPLIEKRA 638

Query: 713 TLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNT 772
              E    +G  A+FGE Y D VR +  G                  S ELCGGTH++NT
Sbjct: 639 IPKEQALEDGAIALFGEKYGDLVRTIKFGD-----------------SVELCGGTHVANT 681

Query: 773 REAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK 820
            +   F ++SE  +A GIRRI A+T+  A + FE+      E+ +A K
Sbjct: 682 SDIWHFKIVSEGAVAAGIRRIEAITSEAAKEYFESQAVSLAEIKEALK 729


>gi|421886006|ref|ZP_16317187.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Senftenberg str. SS209]
 gi|379984321|emb|CCF89460.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Senftenberg str. SS209]
          Length = 876

 Score =  600 bits (1546), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 357/916 (38%), Positives = 515/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT    +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  + +A+ + TGA     K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIEAVAKVTGATDLGNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F +ADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  +++V
Sbjct: 283 VIADHIRSCAFLVADGVLPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIEV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    ELK+++A + +++  EE  F +TL +G+    +    +QG  L G+ AF L+DT
Sbjct: 342 MGSAGEELKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + +E++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   +F V + Q YG  + HIG L+ GA    VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGAGFTFAVDDTQKYGQAIGHIGKLSAGA--LKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + P  +R++E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVAQKGSLVSDKVLRFDFSHNEAMKPSEIRQVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A GIRRI AVT   A     A      ++         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGIRRIEAVTGEGAMATVHAQSDRLNDIAHLLKGDSQN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
              K+   L    Q+ K  +++ ++    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LGDKVRAVLERTRQLEKELQQLKDQ--AAAQESANLSSKAVDLNGVKLLVSEL-AGIEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  V+V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTVIVLAT-VVEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|408490188|ref|YP_006866557.1| alanyl-tRNA synthetase AlaS [Psychroflexus torquis ATCC 700755]
 gi|408467463|gb|AFU67807.1| alanyl-tRNA synthetase AlaS [Psychroflexus torquis ATCC 700755]
          Length = 872

 Score =  600 bits (1546), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 358/845 (42%), Positives = 489/845 (57%), Gaps = 77/845 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           +T +R  F +FF+ K+H    S+P+V  +DPTL+F NAGMNQ+KP FLG + P     K 
Sbjct: 3   STLLRRQFLEFFKSKSHTIVNSAPIVLKDDPTLMFINAGMNQFKPYFLGNSIP-----KE 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           TR  ++QKC+R  GKHNDL++VGKDTYHHT FEMLGNWSFGDYFK EAI+WAWE LT V 
Sbjct: 58  TRVTDSQKCLRVSGKHNDLEEVGKDTYHHTMFEMLGNWSFGDYFKKEAIDWAWEFLTDVL 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
            +  D LY T F GD+  GL  D+EA D+W   +   ++L    KDNFWEMGD GPCGP 
Sbjct: 118 EISKDNLYVTIFEGDKVDGLQKDSEAYDLWKTLVKEDKILLGDKKDNFWEMGDQGPCGPA 177

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + A      LVN D P  +EIWN+VFIQ+NR++DGSL+ LPAKH+DTG+
Sbjct: 178 SEIHVDLRSKEEKAKIPGKDLVNRDHPQVVEIWNLVFIQYNRKADGSLESLPAKHIDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL  ++Q K SNYDTDVF P+   I+  TG     GK      +  D+A RV++DHI
Sbjct: 238 GFERLCMVVQGKTSNYDTDVFTPLIREIETITGTT--YGK-----TEDTDIAIRVISDHI 290

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R ++FAIADG  P N G  YV+RRILRRA+RYG   L  Q  F   LV ++ K MGD FP
Sbjct: 291 RAVTFAIADGQLPSNTGAGYVIRRILRRAIRYGFTFLNIQTPFIYKLVEVLSKQMGDAFP 350

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLD 474
           EL  ++     +I  EE SF KTL +G+        +   K++SGQ AF L+DT+GFP+D
Sbjct: 351 ELISQKNLCENVIHEEEKSFLKTLEQGLGLLDSIVNESSSKIISGQKAFELYDTFGFPID 410

Query: 475 LTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATD 534
           LT L+  E+G  +D +GF   + + ++RS++A    +   +              VL TD
Sbjct: 411 LTTLILSEKGYALDQKGFEVQLQKQKQRSKAAAQTSSSDWV--------------VLKTD 456

Query: 535 DSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGL 594
           D  +FI + D ++ +    T    + S   G    +V   + FY E GGQ+ D+G++E  
Sbjct: 457 DQGEFIGYDDTEADVSI--TKYRKVTSKKEGELYQLVFNLTPFYPEGGGQVGDKGYLETP 514

Query: 595 FG-SFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNF 653
            G + +V + +     +IHI   T+   +  + ++    VD  +R+  A NHT TH+L+ 
Sbjct: 515 NGDTVFVIDTKKENNQIIHI---TKSLPK-DLQKDFKAVVDLSQRQRTASNHTATHLLHQ 570

Query: 654 ALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEAT 713
           ALR +LG HV+QKGS+V    LRFDFSH   +  E L+ IE  VN +IK  L  F +E T
Sbjct: 571 ALRSILGTHVEQKGSMVHSGYLRFDFSHYSKLTQEELQAIEDFVNARIKENL-TFEEERT 629

Query: 714 LAEAKCIN-GLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNT 772
           +     I+ G  A+FGE Y D VR V  G                  S ELCGGTH+ NT
Sbjct: 630 IPYDVAIDKGAIALFGEKYGDTVRFVKFGN-----------------SKELCGGTHVENT 672

Query: 773 REAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKNQVR 832
            +   F + +E  +A GIRRI A+T+  A K F     L KE D  S+++  L +   V 
Sbjct: 673 SKLWHFIINNEASVASGIRRIEAITSDAA-KEF-----LTKESDVLSQVKSILNKPQDVL 726

Query: 833 KAQKKVAEEN--LQKAV---------KVATET-AEAAASNGKPFCISRVEVGLDAAAVRE 880
           K+ + + EEN  L+K +         +V TE  ++    NG  F     +V LDA A+++
Sbjct: 727 KSVESLQEENTTLKKEIEQLNVLKLKQVKTEVQSQLKDINGIQFLAH--QVNLDANAMKD 784

Query: 881 AVLKV 885
              ++
Sbjct: 785 LAFQL 789


>gi|188995245|ref|YP_001929497.1| alanyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
 gi|188594925|dbj|BAG33900.1| alanyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
          Length = 876

 Score =  600 bits (1546), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 329/749 (43%), Positives = 441/749 (58%), Gaps = 64/749 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R++F  FF  K H    S+P+V   DPTL+F NAGMNQ+K I LG    NT+ +K 
Sbjct: 4   SKEIRESFKTFFASKGHKIVPSAPMVIKGDPTLMFTNAGMNQFKDIILG----NTE-AKY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           TR  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAIEWAWE L  V 
Sbjct: 59  TRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAIEWAWEYLVTVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
            L   RLYAT F G  + GL  D+EA   W +FLP  R++     DNFWEMGDTGPCGPC
Sbjct: 119 GLDPQRLYATVFEGSPEEGLDRDDEAASYWAQFLPEERIINGNKHDNFWEMGDTGPCGPC 178

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D   + + A      L+N   P  IEIWN+VF+Q+NR++D SL PLP K +DTG+
Sbjct: 179 SEIHIDLRSDEERAQINGLELINKSHPQVIEIWNLVFMQYNRKADSSLTPLPHKVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF P+  A+   TG       +G  +    D+A RVVADHI
Sbjct: 239 GFERLCMALQGKTSNYDTDVFQPLIHALATMTG-------IGYGEDSASDIAMRVVADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++FAI DG  P N    YV+RRILRRAVRYG   L  ++ F   L+  ++  MGD +P
Sbjct: 292 RTIAFAITDGQLPSNAKAGYVIRRILRRAVRYGYTFLHCREAFMYRLLPTLIDTMGDAYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG---KVLSGQDAFILWDTYGF 471
           EL+ +   I  +I  EE SF +TL  GI   +K   D +     VL G  AF L+DT+GF
Sbjct: 352 ELQAQRELISRVIKEEEESFLRTLETGIRLLEKKIADNKATGSTVLDGVAAFELYDTFGF 411

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT L+  E G+ VD  GF+  M + +ER+R+A   +AG  +V+    +      G  
Sbjct: 412 PLDLTALILSENGMTVDESGFDTEMQKQKERARNAAAVEAGDWVVLREGESKF---SGYD 468

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            T+   + + ++  K   K  +                +VL  + FYAE GGQ+ D G +
Sbjct: 469 FTETETEILRYRQVKQKNKEYFQ---------------VVLLDTPFYAEMGGQVGDSGQL 513

Query: 592 EGLFGSFY-VRNVQIYGGFVIHI-GSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
               G  Y + + +      +H+   L E     S  +  + +++ D+R+    NHT TH
Sbjct: 514 IDESGVAYDIFDTKRENNLSVHLMKKLPE-----STTDTFVARINQDKRRQAEANHTATH 568

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +L+ ALREVLG HV+QKGS V PE LRFDFSH   + PE +R++E +V+E+I+A+     
Sbjct: 569 LLHEALREVLGTHVEQKGSFVSPEVLRFDFSHFGKMSPEEIRKVEELVSERIRADFQREE 628

Query: 710 -KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
            ++  +AEA+ + G  A+FGE Y + VRV+  G                  S ELCGGTH
Sbjct: 629 FRDVPIAEAQAM-GAMALFGEKYGEEVRVLKYGS-----------------SVELCGGTH 670

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVT 797
           + +T     F +++E  IA G+RRI AVT
Sbjct: 671 IPSTGMIGTFRIVTESSIASGVRRIEAVT 699


>gi|344344515|ref|ZP_08775377.1| alanyl-tRNA synthetase [Marichromatium purpuratum 984]
 gi|343803922|gb|EGV21826.1| alanyl-tRNA synthetase [Marichromatium purpuratum 984]
          Length = 869

 Score =  600 bits (1546), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 360/888 (40%), Positives = 501/888 (56%), Gaps = 87/888 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R +F  +F  + H    SSP+VP NDPTLLF NAGM Q+K +FLG      +    
Sbjct: 4   SAELRASFLDYFAQRQHEQVSSSPLVPANDPTLLFTNAGMVQFKDVFLGR-----ERRGY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK EAI +AW+ LT   
Sbjct: 59  SRAVTAQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIGFAWQYLTGEL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFGCKDNFWEMGDTGPCG 237
            LPA+RL+ T +          D+EA DIWLK +   A R    G KDNFW MGDTGPCG
Sbjct: 119 GLPAERLWVTVY--------EDDDEAADIWLKEIGVSAERFSRCGAKDNFWSMGDTGPCG 170

Query: 238 PCSEIHYDR----TGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTG 293
           PCSEI +D      G    +   + D    +EIWN+VF+QFNR+++G++ PLP   VDTG
Sbjct: 171 PCSEIFFDHGPEIAGGPPGSP--DEDGDRYVEIWNLVFMQFNRDAEGNMTPLPRPSVDTG 228

Query: 294 LGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADH 353
           +G ERL ++LQ   SNYD D+F  +  A  +ATG             D  D + RV+ADH
Sbjct: 229 MGLERLAAVLQGVHSNYDIDLFRNLIAAAAEATGCE-----------DLGDKSLRVIADH 277

Query: 354 IRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVF 413
           IR+ +F I DG  PGNEGR YVLRRI+RRA+R+G  + ++Q  FF+ LV  +V  MG  +
Sbjct: 278 IRSSAFLIVDGVTPGNEGRGYVLRRIMRRAIRHGYRLGQSQP-FFHRLVAALVAEMGAAY 336

Query: 414 PELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK-VLSGQDAFILWDTYGFP 472
           PEL   +AH+  I+  EE  F +TL  G+    +A   +     + G+  F L+DTYGFP
Sbjct: 337 PELVAAQAHVERIVRLEEERFAETLEHGMRILDEAIAGLGDTCTIPGETVFKLYDTYGFP 396

Query: 473 LDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLA 532
            DLT  +A ERGL VD+EGF  AM + + R+R+A     G  + +D            L 
Sbjct: 397 TDLTADIARERGLGVDLEGFEAAMADQKARARAASQFSGGQDVEID------------LQ 444

Query: 533 TDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIE 592
            +  F+     + ++ + A+Y   E  +S+  G    ++L  + FY E GGQ+ D G+I 
Sbjct: 445 GETEFRGYERCEDEATVVALYRDGESCDSLGGGERGMVILDLTPFYGESGGQVGDRGWIT 504

Query: 593 GLFGSFYVRNVQIYGG-FVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHML 651
           G  G F V + Q  GG  V HIG L E  G   VG+ V  +VD +RR+ IA NH+ TH+L
Sbjct: 505 GSGGRFEVTDTQKKGGALVCHIGELRE--GELCVGDMVCAEVDGERRRAIALNHSATHLL 562

Query: 652 NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKE 711
           + ALR VLG+HV QKGS+V PE+LRFDFSH +PV  E LR IE +VN +I+A   V ++ 
Sbjct: 563 HAALRRVLGEHVQQKGSLVGPERLRFDFSHFEPVSREQLREIERLVNGEIRANHLVETRI 622

Query: 712 ATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSN 771
            +L +AK  +G  A+FGE Y D VRV+ +G                  S ELCGGTH+  
Sbjct: 623 MSLEDAKA-SGAMALFGEKYADQVRVLRMG----------------EFSVELCGGTHVKA 665

Query: 772 TREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEA--------ACSLEKEVDDASKIEG 823
             +     ++SE GIA G+RRI AV+   A    EA        A  L+   +D  +   
Sbjct: 666 VGDIGLMKIVSEAGIASGVRRIEAVSGAGALDWIEADEQRVLRIAGLLKGAREDVDERVE 725

Query: 824 SLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEV----GLDAAAVR 879
            LLE++      +++ +E  Q   K+A+   +  A+  +     RV      G D   +R
Sbjct: 726 QLLERS------RRLEKELEQLKSKLASAAGQDLAAQAEEVAGVRVLAAELEGADPKGLR 779

Query: 880 EAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWL 927
           E V ++ ++ G  V+V +T  +  K  + AGV +  D + Q +  E +
Sbjct: 780 ETVDQLKDKLGSAVIVLAT-VSEGKVALVAGVTK--DLTGQFKAGELI 824


>gi|294634755|ref|ZP_06713284.1| alanine--tRNA ligase [Edwardsiella tarda ATCC 23685]
 gi|451966822|ref|ZP_21920073.1| alanyl-tRNA synthetase [Edwardsiella tarda NBRC 105688]
 gi|291091814|gb|EFE24375.1| alanine--tRNA ligase [Edwardsiella tarda ATCC 23685]
 gi|451314494|dbj|GAC65435.1| alanyl-tRNA synthetase [Edwardsiella tarda NBRC 105688]
          Length = 875

 Score =  600 bits (1546), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 355/932 (38%), Positives = 517/932 (55%), Gaps = 85/932 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  F+  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    +      +R
Sbjct: 7   EIRQAFLDFYHSKGHQVVDSSSLVPNNDPTLLFTNAGMNQFKDVFLGIDKRS-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  + +
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIKFAWELLTGAQWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP ++L+ T +          D+EA +IW     +P  R++  G         DNFW+M
Sbjct: 122 NLPQEKLWVTVY--------ESDDEAYNIWANEVGVPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGNRDAA--SLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +         + D    IEIWNIVF+QFNR+SDG+L PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGAHIAGGPPGSPDEDGDRYIEIWNIVFMQFNRQSDGTLLPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +     +  G    S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIAETARVIGVDDLSSK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F ++DG  P NEGR YVLRRI+RRAVR+G  +L A++ FF  LV  +++V
Sbjct: 283 VIADHIRSCAFLVSDGVLPSNEGRGYVLRRIIRRAVRHG-HMLGAKESFFYKLVAPLIQV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    EL +++A + +++  EE  F +TL +G+         + G  L G+ AF L+DT
Sbjct: 342 MGSAADELARQQAMVEQVLKTEEEQFARTLERGLALLDDELAQLDGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFPLDLT  +  ER L VD  GF  AM+  R R+R +            AD  + +   
Sbjct: 402 YGFPLDLTADVCRERNLKVDEVGFEKAMEAQRRRARESSG--------FGADYNSLIRVE 453

Query: 529 GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDE 588
           G  +TD  F     Q   + I A++   + ++++  G E  +VL  + FYAE GGQ+ D 
Sbjct: 454 G--STD--FTGYQRQQQMATITALFRNGQAVDALQAGEEGVVVLDQTPFYAESGGQVGDR 509

Query: 589 GFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
           G +     SF V + Q YG  + H+G + +  G   VG  +   +D  RR  I  +H+ T
Sbjct: 510 GELSASGVSFVVDDTQKYGQAIGHLGKVVQ--GHLQVGASLQASIDVARRDRIRLSHSAT 567

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+++ ALR VLG HV QKGS+V    LRFDFSH + + P+ +R++E IVN QI+  L + 
Sbjct: 568 HLMHAALRSVLGTHVAQKGSLVNDGYLRFDFSHPEAMKPQQIRQVEEIVNAQIRRNLPIE 627

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
           ++E  L EAK   G  A+FGE Y   VRV+++G                  S ELCGGTH
Sbjct: 628 TQEMGLEEAKA-KGAMALFGEKYDAQVRVLSMG----------------EFSTELCGGTH 670

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDD---------AS 819
              T +   F ++SE G A G+RRI AVT   A +A      + +E            A 
Sbjct: 671 AERTGDIGLFRIVSESGTAAGVRRIEAVTGEQALQAMHQESDMLREAASLVKGDTQSVAE 730

Query: 820 KIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVR 879
           KI G + +  Q+ KA +++ ++  Q A + A+ +A+A   NG    +S++  G++   +R
Sbjct: 731 KIRGLMEKSRQLEKALQQLKDQ--QAAQESASLSAQAVEVNGVKLLVSQLH-GVEPKMLR 787

Query: 880 EAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCG 939
             V  +  Q G  ++V +T E   K  + AGV +  D + +++  E +    Q + G+ G
Sbjct: 788 TMVDDLKNQMGSCIVVLATAE-EGKVSLIAGVSK--DLTAKVKAGELIGMVAQQVGGKGG 844

Query: 940 KGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
            G+  +A   G+D A +  A+   +++   KL
Sbjct: 845 -GRPDMAQAGGSDVAALPQALASVSDWVTAKL 875


>gi|82545227|ref|YP_409174.1| alanyl-tRNA synthetase [Shigella boydii Sb227]
 gi|416294458|ref|ZP_11650882.1| Alanyl-tRNA synthetase [Shigella flexneri CDC 796-83]
 gi|417683289|ref|ZP_12332636.1| alanyl-tRNA synthetase [Shigella boydii 3594-74]
 gi|420354261|ref|ZP_14855349.1| alanyl-tRNA synthetase [Shigella boydii 4444-74]
 gi|421683857|ref|ZP_16123647.1| alanyl-tRNA synthetase [Shigella flexneri 1485-80]
 gi|123558824|sp|Q31X62.1|SYA_SHIBS RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|81246638|gb|ABB67346.1| alanyl-tRNA synthetase [Shigella boydii Sb227]
 gi|320186483|gb|EFW61211.1| Alanyl-tRNA synthetase [Shigella flexneri CDC 796-83]
 gi|332091817|gb|EGI96895.1| alanyl-tRNA synthetase [Shigella boydii 3594-74]
 gi|391276188|gb|EIQ34964.1| alanyl-tRNA synthetase [Shigella boydii 4444-74]
 gi|404337502|gb|EJZ63955.1| alanyl-tRNA synthetase [Shigella flexneri 1485-80]
          Length = 876

 Score =  600 bits (1546), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 360/916 (39%), Positives = 513/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  K +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + ++++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++    SF V + Q YG  + HIG L   AG   VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKDANFSFAVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A G+RRI AVT   A     A      EV         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAITTVHADSDRLSEVAHLLKGDSNN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            A K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|432407726|ref|ZP_19650432.1| alanyl-tRNA synthetase [Escherichia coli KTE28]
 gi|430928657|gb|ELC49203.1| alanyl-tRNA synthetase [Escherichia coli KTE28]
          Length = 876

 Score =  600 bits (1546), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 360/916 (39%), Positives = 513/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  K +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + ++++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKSVDAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   SF V + Q YG  + HIG L    G   VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--VGSLKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A G+RRI AVT   A     A      EV         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATVYADSDRLSEVAHLLKGDSNN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            A K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|298480309|ref|ZP_06998507.1| alanine--tRNA ligase [Bacteroides sp. D22]
 gi|298273590|gb|EFI15153.1| alanine--tRNA ligase [Bacteroides sp. D22]
          Length = 872

 Score =  600 bits (1546), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 345/809 (42%), Positives = 470/809 (58%), Gaps = 69/809 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++RD+F  FFE K H    S+P+V  +DPTL+F NAGMNQ+K I LG        +K 
Sbjct: 4   AKEIRDSFKNFFESKGHHIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGN-----HPAKY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWE L +V 
Sbjct: 59  QRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAINWAWEYLVEVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +L  + LYAT F G  + GL+ D+EA   W +FLP   ++     DNFWEMGDTGPCGPC
Sbjct: 119 KLNPEHLYATVFEGSPEEGLSRDDEAASYWEQFLPKDHIINGNKHDNFWEMGDTGPCGPC 178

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + A      LVN+D P  IEIWN+VF+Q+NR++DGSL+PLPAK +DTG+
Sbjct: 179 SEIHIDLRPAEERAKISGRDLVNHDHPQVIEIWNLVFMQYNRKADGSLEPLPAKVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF P+  AI   +G      + G D   + D+A RV+ADHI
Sbjct: 239 GFERLCMALQGKTSNYDTDVFQPMLKAIAAMSGT-----EYGKD--KQQDIAMRVIADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++F+I DG  P N    YV+RRILRRAVRYG   L  +  F   L+ +++  MG+ +P
Sbjct: 292 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLIDNMGEAYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ--GKV-LSGQDAFILWDTYGF 471
           EL  ++  I ++I  EE SF +TL  GI    K  +D +  GK  +SG+DAF L+DT+GF
Sbjct: 352 ELVAQKTLIEKVIKEEEESFLRTLETGIRLLDKTMEDTKANGKTEISGKDAFTLYDTFGF 411

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E G+ V+IE FN  M + ++R+R+A   + G  IV+    T  +   G  
Sbjct: 412 PLDLTELILRENGMTVNIEEFNEEMQQQKQRARNAAAIETGDWIVLKEGTTEFV---GYD 468

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            T+     + ++  K   + +Y                IVL  + FYAE GGQ+ D G +
Sbjct: 469 YTEYEASILRYRQIKQKNQTLYQ---------------IVLDYTPFYAESGGQVGDTGVL 513

Query: 592 EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHML 651
              F +  V + +      IHI   T+          + C VD D+R   A NH+ TH+L
Sbjct: 514 VSEFETIEVVDTKKENNLPIHI---TKKLPEHPEAPMMAC-VDTDKRAACAANHSATHLL 569

Query: 652 NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS-K 710
           + ALREVLG+H++QKGS+V P+ LRFDFSH + V  E +R++E IVN +I+A + +   +
Sbjct: 570 DAALREVLGEHIEQKGSLVTPDSLRFDFSHFQKVTDEEIRKVEHIVNARIRANIPLKEYR 629

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
              + EAK +  + A+FGE Y D VRV+  G                  S E CGGTH++
Sbjct: 630 NIPIEEAKELGAI-ALFGEKYGDRVRVIQFG-----------------TSIEFCGGTHVA 671

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKNQ 830
            T       ++SE  +A G+RRI       AY        L+   D  S ++        
Sbjct: 672 ATGNIGMVKIISESSVAAGVRRIE------AYTGARVEEMLDTIQDTLSDLKALFNNAPD 725

Query: 831 VRKAQKKVAEEN--LQKAVKVATETAEAA 857
           +R A +K  +EN  L+K V+   +  EAA
Sbjct: 726 LRIAIRKYLDENAGLKKQVEDFMKEKEAA 754


>gi|416509053|ref|ZP_11736370.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. SARB31]
 gi|416515259|ref|ZP_11738523.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. ATCC BAA710]
 gi|416530102|ref|ZP_11744718.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. LQC 10]
 gi|416537195|ref|ZP_11748811.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. SARB30]
 gi|416562796|ref|ZP_11762432.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 42N]
 gi|416572900|ref|ZP_11767484.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 4441 H]
 gi|363551522|gb|EHL35839.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. LQC 10]
 gi|363551876|gb|EHL36188.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. SARB31]
 gi|363563887|gb|EHL47953.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. SARB30]
 gi|363564239|gb|EHL48296.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. ATCC BAA710]
 gi|363572267|gb|EHL56159.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 4441 H]
 gi|363572574|gb|EHL56465.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 42N]
          Length = 876

 Score =  599 bits (1545), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 357/916 (38%), Positives = 515/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT    +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  + +A+ + TGA     K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIEAVAKVTGATDLGNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F +ADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  +++V
Sbjct: 283 VIADHIRSCAFLVADGVLPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIEV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    ELK+++A + +++  EE  F +TL +G+    +    +QG  L G+ AF L+DT
Sbjct: 342 MGSAGEELKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + +E++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   +F V + Q YG  + HIG L+ GA    VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGAGFTFAVDDTQKYGQAIGHIGKLSAGA--LKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + P  +R++E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVAQKGSLVSDKVLRFDFSHNEAMKPSEIRQVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLDAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A GIRRI AVT   A     A      ++         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGIRRIEAVTGEGAMATVHAQSDRLNDIAHLLKGDSQN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
              K+   L    Q+ K  +++ ++    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LGDKVRAVLERTRQLEKELQQLKDQ--AAAQESANLSSKAVDLNGVKLLVSEL-AGIEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  V+V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTVIVLAT-VVEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|237719250|ref|ZP_04549731.1| alanyl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|293372256|ref|ZP_06618641.1| alanine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
 gi|336415597|ref|ZP_08595936.1| alanyl-tRNA synthetase [Bacteroides ovatus 3_8_47FAA]
 gi|229451629|gb|EEO57420.1| alanyl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|292632698|gb|EFF51291.1| alanine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
 gi|335940476|gb|EGN02343.1| alanyl-tRNA synthetase [Bacteroides ovatus 3_8_47FAA]
          Length = 872

 Score =  599 bits (1545), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 331/747 (44%), Positives = 447/747 (59%), Gaps = 61/747 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++RD+F  FFE K H    S+P+V  +DPTL+F NAGMNQ+K I LG        +K 
Sbjct: 4   AKEIRDSFKNFFESKGHHIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGN-----HPAKY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWE L +V 
Sbjct: 59  QRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAWEYLVEVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +L  + LYAT F G  + GL+ D+EA   W +FLP   ++     DNFWEMGDTGPCGPC
Sbjct: 119 KLNPEHLYATVFEGSPEEGLSRDDEAASYWEQFLPKDHIINGNKHDNFWEMGDTGPCGPC 178

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + A      LVN+D P  IEIWN+VF+Q+NR++DGSL+PLPAK +DTG+
Sbjct: 179 SEIHIDLRPAEERAKISGRDLVNHDHPQVIEIWNLVFMQYNRKADGSLEPLPAKVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF P+  AI   +G      + G D   + D+A RV+ADHI
Sbjct: 239 GFERLCMALQGKTSNYDTDVFQPMLKAIAAMSGT-----EYGKD--KQQDIAMRVIADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++F+I DG  P N    YV+RRILRRAVRYG   L  +  F   L+ +++  MG+ +P
Sbjct: 292 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLIDNMGEAYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ--GKV-LSGQDAFILWDTYGF 471
           EL  ++  I ++I  EE SF +TL  GI    K  +D +  GK  +SG+DAF L+DT+GF
Sbjct: 352 ELVAQKTLIEKVIKEEEESFLRTLETGIRLLDKTMEDTKANGKTEISGKDAFTLYDTFGF 411

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E G+ V+IE FN  M + ++R+R+A   + G  IV+    T  +   G  
Sbjct: 412 PLDLTELILRENGMTVNIEEFNEEMQQQKQRARNAAAIETGDWIVLKEGTTEFV---GYD 468

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            T+     + ++  K   + +Y                IVL  + FYAE GGQ+ D G +
Sbjct: 469 YTEYEASILRYRQIKQKNQTLYQ---------------IVLDYTPFYAESGGQVGDTGVL 513

Query: 592 EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHML 651
              F +  V + +      IHI   T+          + C VD D+R   A NH+ TH+L
Sbjct: 514 VSEFETIEVVDTKKENNLPIHI---TKKLPEHPEAPMMAC-VDTDKRAACAANHSATHLL 569

Query: 652 NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS-K 710
           + ALREVLG+H++QKGS+V P+ LRFDFSH + V  E +R++E IVN +I+A + +   +
Sbjct: 570 DAALREVLGEHIEQKGSLVTPDSLRFDFSHFQKVTDEEIRKVEHIVNARIRANIPLKEYR 629

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
              + EAK +  + A+FGE Y D VRV+  G                  S E CGGTH++
Sbjct: 630 NIPIEEAKELGAI-ALFGEKYGDRVRVIQFG-----------------TSIEFCGGTHVA 671

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVT 797
            T       ++SE  +A G+RRI A T
Sbjct: 672 ATGNIGMVKIISESSVAAGVRRIEAYT 698


>gi|432466839|ref|ZP_19708925.1| alanyl-tRNA synthetase [Escherichia coli KTE205]
 gi|433073883|ref|ZP_20260531.1| alanyl-tRNA synthetase [Escherichia coli KTE129]
 gi|433184358|ref|ZP_20368600.1| alanyl-tRNA synthetase [Escherichia coli KTE85]
 gi|430992636|gb|ELD09005.1| alanyl-tRNA synthetase [Escherichia coli KTE205]
 gi|431586494|gb|ELI57886.1| alanyl-tRNA synthetase [Escherichia coli KTE129]
 gi|431704459|gb|ELJ69085.1| alanyl-tRNA synthetase [Escherichia coli KTE85]
          Length = 876

 Score =  599 bits (1545), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 360/916 (39%), Positives = 513/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  K +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCG C+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGSCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + ++++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   SF V + Q YG  + HIG L   AG   VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A G+RRI AVT   A     A      EV         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATVHADSDRLSEVAHLLKGDSNN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            A K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|420326967|ref|ZP_14828714.1| alanyl-tRNA synthetase [Shigella flexneri CCH060]
 gi|391249145|gb|EIQ08382.1| alanyl-tRNA synthetase [Shigella flexneri CCH060]
          Length = 876

 Score =  599 bits (1544), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 360/916 (39%), Positives = 513/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  K +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + ++++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++    SF V + Q YG  + HIG L   AG   VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKDANFSFAVEDTQKYGQAIGHIGKLA--AGSLKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEVAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A G+RRI AVT   A     A      EV         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAITTVHADSDRLSEVAHLLKGDSNN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            A K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|168230882|ref|ZP_02655940.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
 gi|194471872|ref|ZP_03077856.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|194458236|gb|EDX47075.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|205334599|gb|EDZ21363.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
          Length = 876

 Score =  599 bits (1544), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 356/916 (38%), Positives = 515/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT    +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  + +A+ + TGA     K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIEAVAKVTGATDLGNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F +ADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  +++V
Sbjct: 283 VIADHIRSCAFLVADGVLPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIEV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    ELK+++A + +++  EE  F +TL +G+    +    +QG  L G+ AF L+DT
Sbjct: 342 MGSAGEELKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + +E++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   +F V + Q YG  + H+G L+ GA    VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGAGFTFAVDDTQKYGQAIGHLGKLSAGA--LKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + P  +R++E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVAQKGSLVSDKVLRFDFSHNEAMKPSEIRQVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A GIRRI AVT   A     A      ++         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGIRRIEAVTGEGAMATVHAQSDRLNDIAHLLKGDSQN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
              K+   L    Q+ K  +++ ++    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LGDKVRAVLERTRQLEKELQQLKDQ--AAAQESANLSSKAVDLNGVKLLVSEL-AGIEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  V+V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTVIVLAT-VVEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|423317086|ref|ZP_17294991.1| alanine-tRNA ligase [Bergeyella zoohelcum ATCC 43767]
 gi|405581909|gb|EKB55917.1| alanine-tRNA ligase [Bergeyella zoohelcum ATCC 43767]
          Length = 865

 Score =  599 bits (1544), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 351/874 (40%), Positives = 496/874 (56%), Gaps = 75/874 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R  F  FF+ K H    S+P+V  +DPTL+F+N+GM Q+K  FLG   P++     
Sbjct: 3   SQEIRQKFLDFFKSKGHEIVPSAPIVLKDDPTLMFSNSGMTQFKDFFLGYKQPSS----- 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  +TQKC+R  GKHNDLDDVG+DTYHHT FEMLGNWSFGDYFK EAIEWAWELLT VY
Sbjct: 58  LRVADTQKCLRVSGKHNDLDDVGRDTYHHTMFEMLGNWSFGDYFKKEAIEWAWELLTGVY 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           ++P + +Y T F GD    L  D EA + W   +   R+L    KDNFWEMG+ GPCGPC
Sbjct: 118 KIPKENIYVTIFEGDASENLDRDQEAYNFWKAHISEDRILNGNKKDNFWEMGEQGPCGPC 177

Query: 240 SEIHYDRTGNRDAA-----SLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + A      LVN D P  IE+WN+VF++FNR++DGSL+ LP ++VDTG+
Sbjct: 178 SEIHIDLRSEEEKAKISGKELVNQDHPQVIEVWNLVFMEFNRKADGSLEKLPKQNVDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF P+ + +++ +G + Y GK+     D+ D+A RV+ DHI
Sbjct: 238 GFERLCMALQGKSSNYDTDVFTPLIEKVEEISG-KKYEGKL----EDEKDIAIRVIVDHI 292

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R ++FAIADG  P N G  YV+RRILRRA+RYG   L  ++ F   LV+ +V+ MG+ F 
Sbjct: 293 RAVAFAIADGQLPSNNGAGYVIRRILRRAIRYGFTFLGQKEPFIYQLVDTLVQQMGEAFA 352

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLD 474
           ELK++   ++ +I  EE SF +TL +G+        + + K +SG  AF L+DTYGFP+D
Sbjct: 353 ELKKQHHLVQNVIREEENSFLRTLEQGLLILDAMMNNAENKEISGSKAFELYDTYGFPID 412

Query: 475 LTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATD 534
           LT L+  E+G  +D  GF   + + +ERSR+A   +    +              V+  D
Sbjct: 413 LTALILAEKGFTLDEAGFEENLKKQKERSRAAAQTKTDDWV--------------VIRED 458

Query: 535 DSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGL 594
           D  +FI +   +  ++   T    +ES   G +  +V   + FY E GGQ+ D+GF+   
Sbjct: 459 DETEFIGYDATEGTVRI--TQYRKVESQKEGTQYQLVFNVTPFYPEGGGQVGDKGFLTSA 516

Query: 595 FGSF-YVRNVQIYGGFVIHIG-SLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLN 652
            G   Y+ + +     +IHI  SL E             K +   R L   NHT TH+L+
Sbjct: 517 SGEMTYILDTKKENNLIIHIAESLPENLNE-------PFKAEVKGRPLTEANHTATHLLH 569

Query: 653 FALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEA 712
            ALREVLG HV+Q+GS V  + LRFDFSH + V  E L+ +E  VNE+I  ++ +    +
Sbjct: 570 QALREVLGTHVEQRGSKVDFDGLRFDFSHFQKVTDEELQAVEKKVNERILQQIALKEHRS 629

Query: 713 TLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNT 772
              +     G  A+FGE Y D VR++          AD         S ELCGGTH+ NT
Sbjct: 630 ISMKEAMEAGAMALFGEKYGDKVRMIE--------FAD---------SKELCGGTHVKNT 672

Query: 773 REAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKNQVR 832
            +   F ++SE  +A GIRR+ A+T     K  E   +LE + +  S    +LL+   + 
Sbjct: 673 SDIWYFKIISEGAVASGIRRVEAITR---EKVKEYFFNLEVQHEKLS----ALLKSKDLV 725

Query: 833 KAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVG----------LDAAAVREAV 882
           K+ +K+ EEN Q   +V     E A    + +    V+ G          LDAA+V++ V
Sbjct: 726 KSTEKLQEENAQLKAEVEALKKEKAKGEVQNWKNQFVQSGDKQLLVKKTSLDAASVKDIV 785

Query: 883 LKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSD 916
            ++ ++    V+V  +D    K ++  GV +  D
Sbjct: 786 FQLKKEIAASVIVILSD-AGEKPMITVGVSDDLD 818


>gi|281420549|ref|ZP_06251548.1| alanine--tRNA ligase [Prevotella copri DSM 18205]
 gi|281405322|gb|EFB36002.1| alanine--tRNA ligase [Prevotella copri DSM 18205]
          Length = 887

 Score =  599 bits (1544), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 371/934 (39%), Positives = 516/934 (55%), Gaps = 74/934 (7%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A +VR++F KFFE K H    S+P+V  +DPTL+F NAGMNQ+K I LGT DP     K 
Sbjct: 4   ANEVRESFKKFFEGKGHKIVPSAPMVIKDDPTLMFTNAGMNQWKDIILGTKDP----GKD 59

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  +TQKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK  AI+ AWE LT++ 
Sbjct: 60  VRRVDTQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKEGAIDMAWEYLTEIL 119

Query: 180 RL-PADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGP 238
           +L PAD LY T F G ++ GL  DNEA   W K +PA  ++     DNFWEMGDTGPCGP
Sbjct: 120 KLNPAD-LYVTVFEGSKEEGLERDNEAAGYWAKHVPADHIINGNKHDNFWEMGDTGPCGP 178

Query: 239 CSEIHYD-RTGNRDAA----SLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTG 293
           CSEIH D RT    A      LVN D+P  IEIWNIVF+Q+NR++DGSL+PLP   +DTG
Sbjct: 179 CSEIHVDSRTPEEKAQVPGRELVNKDNPQVIEIWNIVFMQYNRKADGSLEPLPMHVIDTG 238

Query: 294 LGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGAR------PYSGKVGADDADKVDMAY 347
           +GFERL  +LQ+K SNYDTD+F PI   I+  +G +            G D+ +K+D+A 
Sbjct: 239 MGFERLVRMLQDKHSNYDTDIFQPIIKEIEAISGKKYGFTTPTGENGEGKDEQEKIDIAM 298

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RV ADH+R ++F+IADG  P N    YV+RRILRRAVRY    L  +  F   LVN++V+
Sbjct: 299 RVCADHLRAVAFSIADGQLPSNAKAGYVIRRILRRAVRYAYTFLGQKQAFMYKLVNVLVE 358

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ--GKV-LSGQDAFI 464
            MG  FPEL  ++  I  ++  EE SF +TL KGI        +++  GK  L G  AF 
Sbjct: 359 QMGAAFPELPAQQELITRVMKEEEDSFLRTLEKGINLLNGDMDELKAHGKTQLDGVSAFR 418

Query: 465 LWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAA 524
           L+DTYGFPLDLT+L+  E G  VD  GFN  M + +ER+R+A   + G   V+       
Sbjct: 419 LFDTYGFPLDLTELICRENGYTVDAAGFNEEMKKQKERARNAAAVENGDWEVL------- 471

Query: 525 LHKRGVLATDDSFKFIWFQDHKSVI----KAIYTGSEFIESVVPGNEVGIVLASSSFYAE 580
             K G    D +F    + +++  I    K     + F E         +VL ++ FY E
Sbjct: 472 --KEG----DQNFVGYDYTEYECHILRYRKVTQKKNSFYE---------LVLDNTPFYGE 516

Query: 581 QGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
            GGQ+ D+G +     +  V + +      IHI           V  + +  VD + R+ 
Sbjct: 517 MGGQVGDKGVLVSENETIQVIDTKRENNQSIHIVKELPK----DVNADFMACVDIENREG 572

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
            A NHT TH+L++ L++VLGDHV+QKGS V  + LRFDFSH + V  E LR++E +VNE 
Sbjct: 573 SAANHTATHLLDYCLKQVLGDHVEQKGSYVDKDTLRFDFSHFQKVTDEELRKVEHMVNEM 632

Query: 701 IKAELDVFS-KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSI 759
           I+A+  +   ++  + EAK + G  A+FGE Y D VRVV  G                  
Sbjct: 633 IRADYPLDEHRDTPIEEAKEL-GAIALFGEKYGDKVRVVRFGP----------------- 674

Query: 760 SAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAF----EAACSLEKEV 815
           SAE CGG H   T +   F ++SE  +A GIRRI A+T     +A     +   +L+   
Sbjct: 675 SAEFCGGIHAKGTGKIGFFKIISESSVAAGIRRIEALTGKACEEAIYGLQDTIVALKGLF 734

Query: 816 DDASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDA 875
           ++A  +EG + +      A KK  E+   +AV+ A +     A       +    + ++ 
Sbjct: 735 NNAKDLEGVIRKYIDEHDALKKDVEKFQAQAVERAKDKLVENAKEINGVKVVTAVLPMEP 794

Query: 876 AAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLK 935
           AA ++ V KV E     ++        +K ++     +   +   L   + +  A + ++
Sbjct: 795 AAAKDLVFKVREALPENMICVVGSVYNDKPMLSVMFSDDMVKDHGLNAGKMIREAAKLIQ 854

Query: 936 GRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAM 969
           G  G G+   A   G +   ++ A+D   E A +
Sbjct: 855 G-GGGGQPHYAQAGGKNKDGLSAAVDKVVELAQL 887


>gi|168262064|ref|ZP_02684037.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
 gi|200387922|ref|ZP_03214534.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|416425094|ref|ZP_11692129.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315996572]
 gi|416428272|ref|ZP_11693772.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-1]
 gi|416438728|ref|ZP_11699707.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-3]
 gi|416444997|ref|ZP_11704041.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-4]
 gi|416451728|ref|ZP_11708478.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-1]
 gi|416459694|ref|ZP_11714139.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-2]
 gi|416471519|ref|ZP_11719239.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 531954]
 gi|416475510|ref|ZP_11720657.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. NC_MB110209-0054]
 gi|416488620|ref|ZP_11725833.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. OH_2009072675]
 gi|416499449|ref|ZP_11730816.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. CASC_09SCPH15965]
 gi|416544803|ref|ZP_11753059.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 19N]
 gi|416576943|ref|ZP_11769469.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 81038-01]
 gi|416584965|ref|ZP_11774569.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MD_MDA09249507]
 gi|416590574|ref|ZP_11777828.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 414877]
 gi|416606621|ref|ZP_11787889.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 413180]
 gi|416616498|ref|ZP_11794122.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 446600]
 gi|416621840|ref|ZP_11796603.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609458-1]
 gi|416627129|ref|ZP_11799000.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556150-1]
 gi|416640360|ref|ZP_11804978.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609460]
 gi|416647453|ref|ZP_11808392.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 507440-20]
 gi|416656581|ref|ZP_11813267.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556152]
 gi|416667825|ref|ZP_11818505.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB101509-0077]
 gi|416679149|ref|ZP_11822873.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB102109-0047]
 gi|416691442|ref|ZP_11826221.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB110209-0055]
 gi|416706281|ref|ZP_11831540.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB111609-0052]
 gi|416712040|ref|ZP_11835751.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009083312]
 gi|416718236|ref|ZP_11840344.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009085258]
 gi|416726820|ref|ZP_11846865.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315731156]
 gi|416731056|ref|ZP_11848991.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2009159199]
 gi|416741150|ref|ZP_11854901.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008282]
 gi|416749479|ref|ZP_11859268.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008283]
 gi|416753629|ref|ZP_11860933.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008284]
 gi|416765270|ref|ZP_11868651.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008285]
 gi|416768830|ref|ZP_11870828.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008287]
 gi|418482086|ref|ZP_13051109.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 80959-06]
 gi|418493530|ref|ZP_13059996.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. CT_02035318]
 gi|418501079|ref|ZP_13067469.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. CT_02035320]
 gi|418505327|ref|ZP_13071673.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. CT_02035321]
 gi|418510560|ref|ZP_13076839.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. CT_02035327]
 gi|418512177|ref|ZP_13078420.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Pomona str. ATCC 10729]
 gi|418524861|ref|ZP_13090846.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008286]
 gi|199605020|gb|EDZ03565.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|205349249|gb|EDZ35880.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
 gi|322614354|gb|EFY11285.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315996572]
 gi|322621581|gb|EFY18434.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-1]
 gi|322624442|gb|EFY21275.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-3]
 gi|322628773|gb|EFY25556.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-4]
 gi|322633500|gb|EFY30242.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-1]
 gi|322635924|gb|EFY32632.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-2]
 gi|322639632|gb|EFY36317.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 531954]
 gi|322646815|gb|EFY43318.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. NC_MB110209-0054]
 gi|322650583|gb|EFY46988.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. OH_2009072675]
 gi|322654805|gb|EFY51124.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. CASC_09SCPH15965]
 gi|322659025|gb|EFY55278.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 19N]
 gi|322664408|gb|EFY60602.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 81038-01]
 gi|322668343|gb|EFY64500.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MD_MDA09249507]
 gi|322673677|gb|EFY69778.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 414877]
 gi|322681432|gb|EFY77464.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 413180]
 gi|322683834|gb|EFY79844.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 446600]
 gi|323193777|gb|EFZ78980.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609458-1]
 gi|323200247|gb|EFZ85329.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556150-1]
 gi|323203250|gb|EFZ88279.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609460]
 gi|323212791|gb|EFZ97602.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556152]
 gi|323216317|gb|EGA01044.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB101509-0077]
 gi|323221065|gb|EGA05496.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB102109-0047]
 gi|323226886|gb|EGA11068.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB110209-0055]
 gi|323230830|gb|EGA14948.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB111609-0052]
 gi|323234819|gb|EGA18905.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009083312]
 gi|323238858|gb|EGA22908.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009085258]
 gi|323241558|gb|EGA25589.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315731156]
 gi|323248295|gb|EGA32231.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2009159199]
 gi|323251121|gb|EGA34994.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008282]
 gi|323255840|gb|EGA39588.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008283]
 gi|323263139|gb|EGA46677.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008284]
 gi|323264356|gb|EGA47862.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008285]
 gi|323271183|gb|EGA54611.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008287]
 gi|366064383|gb|EHN28582.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. CT_02035318]
 gi|366064819|gb|EHN29016.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 80959-06]
 gi|366067051|gb|EHN31205.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. CT_02035320]
 gi|366067634|gb|EHN31782.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. CT_02035321]
 gi|366076151|gb|EHN40190.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. CT_02035327]
 gi|366083684|gb|EHN47600.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Pomona str. ATCC 10729]
 gi|366830430|gb|EHN57301.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 507440-20]
 gi|372207720|gb|EHP21219.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008286]
          Length = 876

 Score =  598 bits (1543), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 356/916 (38%), Positives = 515/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT    +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  + +A+ + TGA     K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIEAVAKVTGATDLGNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F +ADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  +++V
Sbjct: 283 VIADHIRSCAFLVADGVLPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIEV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    ELK+++A + +++  EE  F +TL +G+    +    +QG  L G+ AF L+DT
Sbjct: 342 MGSAGEELKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + +E++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   +F V + Q YG  + H+G L+ GA    VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGAGFTFAVDDTQKYGQAIGHLGKLSAGA--LKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + P  +R++E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVAQKGSLVSDKVLRFDFSHNEAMKPSEIRQVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLDAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A GIRRI AVT   A     A      ++         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGIRRIEAVTGEGAMATVHAQSDRLNDIAHLLKGDSQN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
              K+   L    Q+ K  +++ ++    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LGDKVRAVLERTRQLEKELQQLKDQ--AAAQESANLSSKAVDLNGVKLLVSEL-AGIEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  V+V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTVIVLAT-VVEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|109899322|ref|YP_662577.1| alanyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
 gi|123360521|sp|Q15RG5.1|SYA_PSEA6 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|109701603|gb|ABG41523.1| alanyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
          Length = 865

 Score =  598 bits (1543), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 358/931 (38%), Positives = 520/931 (55%), Gaps = 93/931 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF DK H    SS +VP +DPTLLF NAGMNQ+K +FLGT     +  K TR
Sbjct: 7   QIRQAFLNFFADKGHQKVSSSSLVPSDDPTLLFTNAGMNQFKDVFLGT-----EQRKYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A ++Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI +AW  LT+V +L
Sbjct: 62  ATSSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHQAIGYAWSFLTEVLKL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           P D+L  T +        + D+EA DIW     +P  +++     DNFW MGDTGPCGPC
Sbjct: 122 PKDKLLVTVY--------SEDDEAFDIWHNDIGIPKEKIIRIATSDNFWSMGDTGPCGPC 173

Query: 240 SEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFE 297
           SEI YD   +           D    IEIWN+VF+QFNR+++G + PLP   +DTG+G E
Sbjct: 174 SEIFYDHGEHIWGGPPGSPEEDGDRFIEIWNLVFMQFNRQANGDMLPLPKPSIDTGMGLE 233

Query: 298 RLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTL 357
           R+++I+QN  SNY+ D+F  +  A  +  G                D + RVVADHIR+ 
Sbjct: 234 RISAIIQNVHSNYEIDIFQNLIKATAKIVGVTSLE-----------DKSLRVVADHIRSC 282

Query: 358 SFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELK 417
           SF I+DG  P NEGR YVLRRI+RRAVR+G++ L A   FF  LV  +   MGD +PEL 
Sbjct: 283 SFLISDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGANGVFFYKLVAALATEMGDAYPELN 341

Query: 418 QREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQ 477
           ++ A I +++  EE  F +TL +G+     A  +++GKV+ G   F L+DTYGFP DLT 
Sbjct: 342 EQRAVIEKVLRVEEEQFSRTLERGMLILNDALNELEGKVVPGDVVFKLYDTYGFPADLTN 401

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSF 537
            +A E+GL +D EGF  AM E R+R++ A N         D D    L       +D   
Sbjct: 402 DVAREKGLSIDEEGFEQAMAEQRKRAQKASN--------FDVDYNEQLR------SDLES 447

Query: 538 KFIWF--QDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLF 595
            F+ +  +D+ + I  ++   + +  +  G E  ++L  S FYAE GGQ  D G +    
Sbjct: 448 IFVGYEHEDNTATITELFFKGQSVNELAAGAEGTVILDESPFYAEAGGQAGDTGTLVTDA 507

Query: 596 GSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFAL 655
           G F V++    G  + H G+      + SVG+ V+ KV+  RR  I  NH+ TH+++ AL
Sbjct: 508 GGFSVKDTVKLGKAIAHKGA---ALSKLSVGDSVLAKVNGVRRHAIKLNHSATHLMHAAL 564

Query: 656 REVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLA 715
           + +LG+HV+QKGS+V  ++LRFDFSH + +  E +  +E++VNEQI A   + ++   L 
Sbjct: 565 KSILGEHVNQKGSLVQADRLRFDFSHFEAMSKEQVLAVETMVNEQILANHPLQTQLMGLE 624

Query: 716 EAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREA 775
           +AK   G  A+FGE Y D VRVV++G                S S ELCGGTH+  T + 
Sbjct: 625 QAKEA-GAMALFGEKYDDDVRVVSMG----------------SFSMELCGGTHVERTGDI 667

Query: 776 EAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKNQVRKAQ 835
             F ++SE GIA G+RRI AVT         A   ++++  + S I   L  K  V  A 
Sbjct: 668 GLFKIISESGIASGVRRIEAVT------GLTALQHVQQQTFELSSISAVL--KTDVNSAG 719

Query: 836 KKVAE-----ENLQKAV-KVATETAEAAAS---------NGKPFCISRVEVGLDAAAVRE 880
           ++V +     + L+K V K+  E A +A S         NG       V+ G+++ A+R 
Sbjct: 720 ERVVQLIEQTKTLEKEVAKLKQEIANSAGSDLLSQINEINGVKVLSYHVQ-GIESGALRT 778

Query: 881 AVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGK 940
            +  +  Q G  V++     T +K  + AGV +  D + +++  E +    Q + G+ G 
Sbjct: 779 MIDDLKNQIGSGVILLGL-ATGDKVSLIAGVTK--DLTHKVKAGELVNFVAQQVGGKGG- 834

Query: 941 GKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           G+  +A   G+    +  A+   +E+   +L
Sbjct: 835 GRPDMAQAGGSQPENLDTAIASVSEWLQERL 865


>gi|408480338|ref|ZP_11186557.1| alanyl-tRNA ligase [Pseudomonas sp. R81]
          Length = 872

 Score =  598 bits (1543), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 356/891 (39%), Positives = 512/891 (57%), Gaps = 87/891 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F +FFE++ H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLRFFEEQGHTRVASSSLIPGNDPTLLFTNAGMNQFKDCFLGQ-----EKRAY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           TRA ++QKC+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AW  LT V 
Sbjct: 58  TRAVSSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAINFAWTFLTGVL 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
           +LP ++L+ T +        A D+EA DIW K   +PA R++  G         DNFW M
Sbjct: 118 KLPKEKLWVTVY--------ASDDEAYDIWTKEVGVPAERMVRIGDNKGAPYASDNFWTM 169

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG L PLPA 
Sbjct: 170 GDTGPCGPCTEIFYDHGADIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLPAP 229

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+++++Q+  SNY+ D+F  +  A  +A         +G  + D+  +  +
Sbjct: 230 SVDTGMGLERISAVMQHVHSNYEIDLFQSLLAAAAKA---------IGCTNEDQASL--K 278

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           VVADHIR+  F IADG  P NEGR YVLRRI+RRA R+G++ L A   FF  +V  +V  
Sbjct: 279 VVADHIRSCGFLIADGVLPSNEGRGYVLRRIIRRACRHGNK-LGANGSFFYQIVAALVAE 337

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG+ FPELKQ +AHI  ++ AEE  F KTL +G++  ++   ++QG V+ G   F L+DT
Sbjct: 338 MGEAFPELKQNQAHIERVLKAEEEQFAKTLEQGLKILEQDLANLQGSVVPGDVVFKLYDT 397

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +A ER L +D EGF   M+  R R+RSA       +  MD ++       
Sbjct: 398 YGFPMDLTGDIARERNLTLDEEGFEREMEAQRVRARSAS------SFGMDYNS------- 444

Query: 529 GVLATDDSFKFIWFQDHKSVIK--AIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
            ++  D + +F  ++  +   K  A+Y   + ++ +  G++  +VL  + FYAE GGQI 
Sbjct: 445 -LVKVDVATEFTGYKATRGAAKVVALYKEGQSVDVLNEGDDGVVVLDQTPFYAESGGQIG 503

Query: 587 DEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
           D GF+E   G F VR+    GG  +H G L  G+   +VG  V  +VD D R   + NH+
Sbjct: 504 DCGFLEASSGRFDVRDTTKTGGAFLHHGVLASGS--LTVGSPVEAQVDADVRHATSLNHS 561

Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD 706
            TH+L+ ALR+VLG+HV QKGS+V  ++LRFDFSH + + PE ++ +E IVN +I+    
Sbjct: 562 ATHLLHAALRQVLGEHVQQKGSLVDSQRLRFDFSHFEAIKPEQIKALEDIVNAEIRKNTA 621

Query: 707 VFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGG 766
           V ++E  +  AK   G  A+FGE Y D VRV+++G                  S ELCGG
Sbjct: 622 VETEETDIETAKA-KGAMALFGEKYGDSVRVLSMGG---------------DFSVELCGG 665

Query: 767 THLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAF--------EAACSLEKEVDDA 818
            H + T +     ++SE G+A G+RRI AVT   A            EAA  ++   D+ 
Sbjct: 666 IHANRTGDIALLKIVSEGGVASGVRRIEAVTGAAALAYLNAAEEQLKEAASLVKGSRDNL 725

Query: 819 SKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCI--SRVEVGLDAA 876
                ++LE+N   +A +K  E+   KA   A +   A+A + K   +  +R++ G D  
Sbjct: 726 IDKLSAVLERN---RALEKQLEQLQAKAASAAGDDLSASAVDVKDVKVLAARLD-GQDGK 781

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWL 927
           A+   V ++  + G  V++       +K V+ AGV +  D + QL+  + +
Sbjct: 782 ALLALVDQLKNKLGRAVILLGGVH-EDKVVLVAGVTK--DLTGQLKAGDLM 829


>gi|418774442|ref|ZP_13330411.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. CVM 33953]
 gi|392751254|gb|EJA08209.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. CVM 33953]
          Length = 876

 Score =  598 bits (1543), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 356/916 (38%), Positives = 514/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT    +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  + +A+ + TGA     K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIEAVAKVTGATDLGNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F +ADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  +++V
Sbjct: 283 VIADHIRSCAFLVADGVLPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIEV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    ELK+++A + +++  EE  F +TL +G+    +    +QG  L G+ AF L+DT
Sbjct: 342 MGSAGEELKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + +E++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   +F V + Q YG  + H+G L+ GA    VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGAGFTFAVDDTQKYGQAIGHLGKLSAGA--LKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + P  +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVAQKGSLVSDKVLRFDFSHNEAMKPSEIREVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLDAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A GIRRI AVT   A     A      ++         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGIRRIEAVTGEGAMATVHAQSDRLNDIAHLLKGDSQN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
              K+   L    Q+ K  +++ ++    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LGDKVRAVLERTRQLEKELQQLKDQ--AAAQESANLSSKAVDLNGMKLLVSEL-AGIEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  V+V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTVIVLAT-VVEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|168820492|ref|ZP_02832492.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|409246496|ref|YP_006887200.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. 2007-60-3289-1]
 gi|205342835|gb|EDZ29599.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|320087230|emb|CBY96995.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. 2007-60-3289-1]
          Length = 876

 Score =  598 bits (1543), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 357/916 (38%), Positives = 514/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT    +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  + +A+ + TGA     K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIEAVAKVTGATDLGNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F +ADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  +++V
Sbjct: 283 VIADHIRSCAFLVADGVLPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIEV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    ELK+++A + +++  EE  F +TL +G+    +    +QG  L G+ AF L+DT
Sbjct: 342 MGSAGEELKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + +E +  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVEVINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   +F V + Q YG  + HIG L+ GA    VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGAGFTFAVDDTQKYGQAIGHIGKLSAGA--LKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + P  +R++E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVAQKGSLVSDKVLRFDFSHNEAMKPSEIRQVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLDAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A GIRRI AVT   A     A      ++         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGIRRIEAVTGEGAMATVHAQSDRLNDIAHLLKGDSQN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
              K+   L    Q+ K  +++ ++    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LGDKVRAVLERTRQLEKELQQLKDQ--AAAQESANLSSKAVDLNGVKLLVSEL-AGIEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  V+V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTVIVLAT-VVEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|319901112|ref|YP_004160840.1| alanyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
 gi|319416143|gb|ADV43254.1| alanyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
          Length = 872

 Score =  598 bits (1542), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 334/747 (44%), Positives = 439/747 (58%), Gaps = 61/747 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++RD+F  FFE K H    S+P+V  +DPTL+F NAGMNQ+K I LG        +K 
Sbjct: 4   ANEIRDSFKSFFESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGN-----HPAKY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWE L  V 
Sbjct: 59  KRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAWEYLVDVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +L    LYAT F G  + GL  DNEA   W +FLP   +L     DNFWEMGDTGPCGPC
Sbjct: 119 KLDPKDLYATVFEGSPEEGLERDNEAASYWEQFLPKDHILNGNKHDNFWEMGDTGPCGPC 178

Query: 240 SEIHYD-RTGNRDA----ASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D RT    A    + LVN D P  IEIWN+VF+Q+NR++DGSL+ LPAK +DTG+
Sbjct: 179 SEIHVDSRTEEEKAKVPGSQLVNKDHPQVIEIWNLVFMQYNRKADGSLEGLPAKVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF P+  AI    G     GK      ++ D+A RV+ADHI
Sbjct: 239 GFERLVRTLQGKTSNYDTDVFQPMLKAIADMAGTT--YGK-----NEQQDIAMRVIADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++F+I DG  P N    YV+RRILRRAVRYG   L  +  F   L+ ++++ MG  +P
Sbjct: 292 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYRLLPVLIENMGGSYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ--GKV-LSGQDAFILWDTYGF 471
           EL  ++  I ++I  EE SF +TL  GI    K   D +  GK  +SG+DAF L+DT+GF
Sbjct: 352 ELIAQKELIAKVIKEEEDSFLRTLETGIRLLDKTMADAKAAGKTEVSGKDAFTLYDTFGF 411

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E G+  D+  FN  M++ + R+R+A   + G  I +    T  +   G  
Sbjct: 412 PLDLTELILRENGMTADLNEFNAEMEQQKSRARNAAAIETGDWITLKEGTTEFV---GYD 468

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            T+     + ++  K   + +Y                IVL  + FYAE GGQ+ D G +
Sbjct: 469 FTEYETSILRYRQIKQKNQTLYQ---------------IVLDKTPFYAESGGQVGDTGVL 513

Query: 592 EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHML 651
              F +  V + +      IHI   T+          + C VD D+R   A NH+ TH+L
Sbjct: 514 VSEFETIDVIDTKKENNLPIHI---TKKLPEHLEAPMMAC-VDTDKRAACAANHSATHLL 569

Query: 652 NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS-K 710
           + ALREVLGDHV+QKGS+V P+ LRFDFSH + V  E LR+IE I N +I+A + +   +
Sbjct: 570 DAALREVLGDHVEQKGSLVTPDSLRFDFSHFQKVTDEELRQIEHIANAKIRANIPLKEYR 629

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
           +  + +AK + G  A+FGE Y D VRV+  G                  S E CGGTH++
Sbjct: 630 DMPIEDAKEL-GAIALFGEKYGDHVRVIQFGS-----------------SVEFCGGTHVA 671

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVT 797
            T       ++SE  +A G+RRI A T
Sbjct: 672 ATGNIGMVKIVSESSVAAGVRRIEAYT 698


>gi|299148308|ref|ZP_07041370.1| alanine--tRNA ligase [Bacteroides sp. 3_1_23]
 gi|298513069|gb|EFI36956.1| alanine--tRNA ligase [Bacteroides sp. 3_1_23]
          Length = 872

 Score =  598 bits (1542), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 331/747 (44%), Positives = 447/747 (59%), Gaps = 61/747 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++RD+F  FFE K H    S+P+V  +DPTL+F NAGMNQ+K I LG        +K 
Sbjct: 4   AKEIRDSFKNFFESKGHHIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGN-----HPAKY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWE L +V 
Sbjct: 59  QRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAWEYLVEVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +L  + LYAT F G  + GL+ D+EA   W +FLP   ++     DNFWEMGDTGPCGPC
Sbjct: 119 KLNPEHLYATVFEGSPEEGLSRDDEAASYWEQFLPKDHIINGNKHDNFWEMGDTGPCGPC 178

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + A      LVN+D P  IEIWN+VF+Q+NR++DGSL+PLPAK +DTG+
Sbjct: 179 SEIHIDLRPAEERAKISGRDLVNHDHPQVIEIWNLVFMQYNRKADGSLEPLPAKVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF P+  AI   +G      + G D   + D+A RV+ADHI
Sbjct: 239 GFERLCMALQGKTSNYDTDVFQPMLKAIAAMSGT-----EYGKD--KQQDIAMRVIADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++F+I DG  P N    YV+RRILRRAVRYG   L  +  F   L+ +++  MG+ +P
Sbjct: 292 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLIDNMGEAYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ--GKV-LSGQDAFILWDTYGF 471
           EL  ++  I ++I  EE SF +TL  GI    K  +D +  GK  +SG+DAF L+DT+GF
Sbjct: 352 ELVAQKTLIEKVIKEEEESFLRTLETGIRLLDKTMEDTKANGKTEISGKDAFTLYDTFGF 411

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E G+ V+IE FN  M + ++R+R+A   + G  IV+    T  +   G  
Sbjct: 412 PLDLTELILRENGMTVNIEEFNEEMQQQKQRARNAAAIETGDWIVLKEGTTEFV---GYD 468

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            T+     + ++  K   + +Y                IVL  + FYAE GGQ+ D G +
Sbjct: 469 YTEYEASILRYRQIKQKNQTLYQ---------------IVLDYTPFYAESGGQVGDTGVL 513

Query: 592 EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHML 651
              F +  V + +      IHI   T+          + C VD D+R   A NH+ TH+L
Sbjct: 514 VSEFETIEVVDTKKENNLPIHI---TKKLPDHPEAPMMAC-VDTDKRAACAANHSATHLL 569

Query: 652 NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS-K 710
           + ALREVLG+H++QKGS+V P+ LRFDFSH + V  E +R++E IVN +I+A + +   +
Sbjct: 570 DAALREVLGEHIEQKGSLVTPDSLRFDFSHFQKVTDEEIRKVEHIVNARIRANIPLKEYR 629

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
              + EAK +  + A+FGE Y D VRV+  G                  S E CGGTH++
Sbjct: 630 NIPIEEAKELGAI-ALFGEKYGDRVRVIQFG-----------------TSIEFCGGTHVA 671

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVT 797
            T       ++SE  +A G+RRI A T
Sbjct: 672 ATGNIGMVKIISESSVAAGVRRIEAYT 698


>gi|160886801|ref|ZP_02067804.1| hypothetical protein BACOVA_04814 [Bacteroides ovatus ATCC 8483]
 gi|423292552|ref|ZP_17271130.1| alanyl-tRNA synthetase [Bacteroides ovatus CL02T12C04]
 gi|156107212|gb|EDO08957.1| alanine--tRNA ligase [Bacteroides ovatus ATCC 8483]
 gi|392661633|gb|EIY55213.1| alanyl-tRNA synthetase [Bacteroides ovatus CL02T12C04]
          Length = 872

 Score =  598 bits (1542), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 332/747 (44%), Positives = 447/747 (59%), Gaps = 61/747 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++RD+F  FFE K H    S+P+V  +DPTL+F NAGMNQ+K I LG        +K 
Sbjct: 4   AKEIRDSFKNFFESKGHHIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGN-----HPAKY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWE L +V 
Sbjct: 59  QRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAWEYLVEVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +L  + LYAT F G  + GL+ D+EA   W +FLP   ++     DNFWEMGDTGPCGPC
Sbjct: 119 KLNPEHLYATVFEGSPEEGLSRDDEAASYWEQFLPKDHIINGNKHDNFWEMGDTGPCGPC 178

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + A      LVN+D P  IEIWN+VF+Q+NR++DGSL+PLPAK +DTG+
Sbjct: 179 SEIHIDLRPAEERAKISGRDLVNHDHPQVIEIWNLVFMQYNRKADGSLEPLPAKVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF P+  AI   +G      + G D   + D+A RV+ADHI
Sbjct: 239 GFERLCMALQGKTSNYDTDVFQPMLKAIAAMSGT-----EYGKD--KQQDIAMRVIADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++F+I DG  P N    YV+RRILRRAVRYG   L  +  F   L+ +++  MG+ +P
Sbjct: 292 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLIDNMGEAYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ--GKV-LSGQDAFILWDTYGF 471
           EL  ++  I ++I  EE SF +TL  GI    K  +D +  GK  +SG+DAF L+DT+GF
Sbjct: 352 ELVAQKTLIEKVIKEEEESFLRTLETGIRLLDKTMEDTKANGKTEISGKDAFTLYDTFGF 411

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E G+ V+IE FN  M + ++R+R+A   + G  IV+    T  +   G  
Sbjct: 412 PLDLTELILRENGMTVNIEEFNEEMQQQKQRARNAAAIETGDWIVLKEGTTEFV---GYD 468

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            T+     + ++  K   + +Y                IVL  + FYAE GGQ+ D G +
Sbjct: 469 YTEYEASILRYRQIKQKNQTLYQ---------------IVLDYTPFYAESGGQVGDTGVL 513

Query: 592 EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHML 651
              F +  V + +      IHI   T+          + C VD D+R   A NH+ TH+L
Sbjct: 514 VSEFETIEVVDTKKENNLPIHI---TKKLPDHPEAPMMAC-VDTDKRAACAANHSATHLL 569

Query: 652 NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS-K 710
           + ALREVLG+H++QKGS+V P+ LRFDFSH + V  E +R++E IVN +I+A + +   +
Sbjct: 570 DAALREVLGEHIEQKGSLVTPDSLRFDFSHFQKVTDEEIRKVEHIVNARIRANIPLKEYR 629

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
              + EAK + G  A+FGE Y D VRV+  G                  S E CGGTH++
Sbjct: 630 NIPIEEAKEL-GAIALFGEKYGDRVRVIQFG-----------------TSIEFCGGTHVA 671

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVT 797
            T       ++SE  +A G+RRI A T
Sbjct: 672 ATGNIGMVKIISESSVAAGVRRIEAYT 698


>gi|420374716|ref|ZP_14874664.1| alanyl-tRNA synthetase [Shigella flexneri 1235-66]
 gi|391315937|gb|EIQ73437.1| alanyl-tRNA synthetase [Shigella flexneri 1235-66]
          Length = 875

 Score =  598 bits (1542), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 360/915 (39%), Positives = 514/915 (56%), Gaps = 89/915 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT    +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQYAWELLTGENWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAAYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSAEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNY+ D+F  + +++ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYEIDLFRSLIESVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A+D FF  LV  +V V
Sbjct: 283 VIADHIRSCAFLIADGVVPSNENRGYVLRRIIRRAVRHGN-MLGAKDTFFYKLVGPLVDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    ELK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEELKRQQAMVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A +   
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNAMIRVD 453

Query: 529 GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDE 588
           G       FK   + +    + A++   + ++ +  G +  +VL  + FYAE GGQ+ D+
Sbjct: 454 GA----SEFKGYEYLELNGKVTALFVDGKAVDVINAGQDAVVVLDQTPFYAESGGQVGDK 509

Query: 589 GFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
           G ++G   +F V + Q YG  + HIG L+  AG   VG+ V   VD  RR  I  NH+ T
Sbjct: 510 GELKGAGFAFAVNDTQKYGQAIGHIGKLS--AGSLKVGDAVQADVDEARRARIRLNHSAT 567

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+++ ALREVLG HV QKGS+V  + LRFDFSH + + P  +R +E +VN QI+  L + 
Sbjct: 568 HLMHAALREVLGTHVAQKGSLVNDKVLRFDFSHTEAMKPAEIRAVEDLVNAQIRRNLPIE 627

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
           +    L  AK   G  A+FGE Y D VRV+++G                  S ELCGGTH
Sbjct: 628 TNIMDLEAAKA-KGAMALFGEKYDDHVRVLSMG----------------DFSTELCGGTH 670

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEG----- 823
            S T +   F ++SE G A G+RRI AVT   A +   A    ++  D A  ++G     
Sbjct: 671 ASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIQTVHAES--DRLSDIAQLLKGDSQTI 728

Query: 824 -----SLLEKNQVRKAQKKVAEENLQKAVK-VATETAEAAASNGKPFCISRVEVGLDAAA 877
                S+LE+   R+ +K++ +   Q A +  A  +++A   NG    +S +   ++   
Sbjct: 729 GDKVRSVLER--TRQLEKELQQLKEQAAAQESANLSSKAVDINGVKLLVSEL-ADVEPKM 785

Query: 878 VREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGR 937
           +R  V  +  Q G  V+V +T     K  + AGV +  D + +++  E +    Q + G+
Sbjct: 786 LRTMVDDLKNQLGSTVVVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGGK 842

Query: 938 CGKGKGGLASGQGTD 952
            G G+  +A   GTD
Sbjct: 843 GG-GRPDMAQAGGTD 856


>gi|423136048|ref|ZP_17123693.1| alanyl-tRNA synthetase [Myroides odoratimimus CIP 101113]
 gi|371639253|gb|EHO04871.1| alanyl-tRNA synthetase [Myroides odoratimimus CIP 101113]
          Length = 875

 Score =  598 bits (1542), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 347/834 (41%), Positives = 480/834 (57%), Gaps = 60/834 (7%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R  F  FFE++ H+   S+P+V  +DPTL+F N+GM Q+K  FLG A P     K 
Sbjct: 3   SQEIRQKFLNFFEERGHMVVPSAPIVLKDDPTLMFNNSGMAQFKEYFLGNAKP-----KS 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  +TQKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWELLT+VY
Sbjct: 58  NRITDTQKCLRVSGKHNDLEEVGIDTYHHTMFEMLGNWSFGDYFKKEAINWAWELLTEVY 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
            +P D LY T F G E+  +  D EA DIW   +   R+L    KDNFWEMGD GPCGPC
Sbjct: 118 NIPKDILYVTVFEGSEEENVPFDQEAYDIWSTLIDKDRILMGNKKDNFWEMGDQGPCGPC 177

Query: 240 SEIHYDRTGNRDAA-----SLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           +EIH D     + A      LVN D P  +EIWN VF++FNR++DGSL+ LPA+HVDTG+
Sbjct: 178 TEIHVDIRSAEEKAKIAGRELVNGDHPQVVEIWNNVFMEFNRKADGSLEKLPAQHVDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL  +LQ   SNYDTDVF P+   + + TG + Y+ K   D+ +K+++A RV+ DH+
Sbjct: 238 GFERLCMVLQGVQSNYDTDVFSPLIAKVSELTGGK-YTMKAKDDEEEKINIAIRVIVDHV 296

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R ++FAIADG  P N G  YV+RRILRRA+RY    L  ++ F   LV ++   MG  FP
Sbjct: 297 RAVAFAIADGQLPSNNGAGYVIRRILRRAIRYAFTFLDKKEPFIYELVEVLSAQMGAFFP 356

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLD 474
           E+  ++  ++ +I  EE SF +TL +G+       +  +GKV+SG  AF L+DT+GFP+D
Sbjct: 357 EITSQKELVKNVIKEEETSFLRTLEQGLHLLDNVIKQTEGKVVSGVKAFELYDTFGFPID 416

Query: 475 LTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATD 534
           LT L+  E+G  +D  GF+ AM E + RSR+A         V   D T       VL + 
Sbjct: 417 LTALILREKGYELDEAGFDAAMLEQKTRSRAASE-------VSTDDWT-------VLVSG 462

Query: 535 DSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGL 594
           +  +F+ +   ++ +K   T    I+S   G    IVL ++ FY E GGQ+ D G +   
Sbjct: 463 NVEQFVGYDQLENEVK--ITRYRKIDSKKDGKLFQIVLDATPFYPEGGGQVGDTGVLVSA 520

Query: 595 FGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFA 654
             +  V + +     ++HI          +V   ++ KVD D RK    NH+ TH+L+ A
Sbjct: 521 NDTIQVIDTKKENNLILHIVRELPA----NVEGTLVAKVDIDARKQSMANHSATHLLHQA 576

Query: 655 LREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATL 714
           LR +LG HV+QKGS+V P  LRFDFSH   V  E L ++E+ VN++I   L +  + +  
Sbjct: 577 LRTILGTHVEQKGSLVAPTHLRFDFSHFSKVTEEELAQVEAFVNDRIHDHLPLVERRSIP 636

Query: 715 AEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTRE 774
                  G  A+FGE Y D VR +  G                  S ELCGGTH+ NT +
Sbjct: 637 MAQAIAEGAMALFGEKYGDEVRAIKFGE-----------------SMELCGGTHVGNTSD 679

Query: 775 AEAFALLSEEGIAKGIRRITAVTTGLAYKAF-EAACSLE------KEVDDASKIEGSLLE 827
              F ++SE  +A GIRRI A+T   A + + E   +L+      K   D  K  G+L E
Sbjct: 680 IWQFKIVSEGAVAAGIRRIEAITNKAARQFYAEQELTLKEIKMVLKNPQDTLKAVGALQE 739

Query: 828 KNQVRKAQKKVAEENLQKAVKVATE-TAEAAASNGKPFCISRVEVGLDAAAVRE 880
           +N   K +K+V +   +KA  +  +   +    NG  F    VEV LDA+  ++
Sbjct: 740 ENA--KLKKQVEQLLKEKAKNLKGDLKGQIQEVNGIAFL--AVEVDLDASGAKD 789


>gi|423329816|ref|ZP_17307622.1| alanyl-tRNA synthetase [Myroides odoratimimus CCUG 3837]
 gi|404602724|gb|EKB02411.1| alanyl-tRNA synthetase [Myroides odoratimimus CCUG 3837]
          Length = 875

 Score =  598 bits (1542), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 347/834 (41%), Positives = 480/834 (57%), Gaps = 60/834 (7%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R  F  FFE++ H+   S+P+V  +DPTL+F N+GM Q+K  FLG A P     K 
Sbjct: 3   SQEIRQKFLNFFEERGHMVVPSAPIVLKDDPTLMFNNSGMAQFKEYFLGNAKP-----KS 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  +TQKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWELLT+VY
Sbjct: 58  NRITDTQKCLRVSGKHNDLEEVGIDTYHHTMFEMLGNWSFGDYFKKEAINWAWELLTEVY 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
            +P D LY T F G E+  +  D EA DIW   +   R+L    KDNFWEMGD GPCGPC
Sbjct: 118 NIPKDILYVTVFEGSEEENVPFDQEAYDIWSTLIDKDRILMGNKKDNFWEMGDQGPCGPC 177

Query: 240 SEIHYDRTGNRDAA-----SLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           +EIH D     + A      LVN D P  +EIWN VF++FNR++DGSL+ LPA+HVDTG+
Sbjct: 178 TEIHVDIRSAEEKAKIAGRELVNGDHPQVVEIWNNVFMEFNRKADGSLEKLPAQHVDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL  +LQ   SNYDTDVF P+   + + TG + Y+ K   D+ +K+++A RV+ DH+
Sbjct: 238 GFERLCMVLQGVQSNYDTDVFSPLIAKVSELTGGK-YTMKAKDDEEEKINIAIRVIVDHV 296

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R ++FAIADG  P N G  YV+RRILRRA+RY    L  ++ F   LV ++   MG  FP
Sbjct: 297 RAVAFAIADGQLPSNNGAGYVIRRILRRAIRYAFTFLDKKEPFIYELVEVLSAQMGAFFP 356

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLD 474
           E+  ++  ++ +I  EE SF +TL +G+       +  +GKV+SG  AF L+DT+GFP+D
Sbjct: 357 EITSQKELVKNVIKEEETSFLRTLEQGLHLLDNVIKQTEGKVVSGVKAFELYDTFGFPID 416

Query: 475 LTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATD 534
           LT L+  E+G  +D  GF+ AM E + RSR+A         V   D T       VL + 
Sbjct: 417 LTALILREKGYELDEAGFDAAMLEQKTRSRAASE-------VSTDDWT-------VLVSG 462

Query: 535 DSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGL 594
           +  +F+ +   ++ +K   T    I+S   G    IVL ++ FY E GGQ+ D G +   
Sbjct: 463 NVEQFVGYDQLENEVK--ITRYRKIDSKKDGKLFQIVLDATPFYPEGGGQVGDTGVLVSA 520

Query: 595 FGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFA 654
             +  V + +     ++HI          +V   ++ KVD D RK    NH+ TH+L+ A
Sbjct: 521 NDTIQVIDTKKENNLILHIVRELPA----NVEGTLVAKVDVDARKQSMANHSATHLLHQA 576

Query: 655 LREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATL 714
           LR +LG HV+QKGS+V P  LRFDFSH   V  E L ++E+ VN++I   L +  + +  
Sbjct: 577 LRTILGTHVEQKGSLVAPTHLRFDFSHFSKVTEEELAQVEAFVNDRIHDHLPLVERRSIP 636

Query: 715 AEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTRE 774
                  G  A+FGE Y D VR +  G                  S ELCGGTH+ NT +
Sbjct: 637 MAQAIAEGAMALFGEKYGDEVRAIKFGE-----------------SMELCGGTHVGNTSD 679

Query: 775 AEAFALLSEEGIAKGIRRITAVTTGLAYKAF-EAACSLE------KEVDDASKIEGSLLE 827
              F ++SE  +A GIRRI A+T   A + + E   +L+      K   D  K  G+L E
Sbjct: 680 IWQFKIVSEGAVAAGIRRIEAITNKAARQFYAEQELTLKEIKMVLKNPQDTLKAVGALQE 739

Query: 828 KNQVRKAQKKVAEENLQKAVKVATE-TAEAAASNGKPFCISRVEVGLDAAAVRE 880
           +N   K +K+V +   +KA  +  +   +    NG  F    VEV LDA+  ++
Sbjct: 740 ENA--KLKKQVEQLLKEKAKNLKGDLKGQIQEVNGIAFL--AVEVDLDASGAKD 789


>gi|16766133|ref|NP_461748.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|168245264|ref|ZP_02670196.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|168464053|ref|ZP_02697970.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|194443356|ref|YP_002042068.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|194450006|ref|YP_002046787.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|197264802|ref|ZP_03164876.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|374981458|ref|ZP_09722785.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. TN061786]
 gi|378446184|ref|YP_005233816.1| AlaRS [Salmonella enterica subsp. enterica serovar Typhimurium str.
           D23580]
 gi|378451563|ref|YP_005238923.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 14028S]
 gi|378700739|ref|YP_005182696.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. SL1344]
 gi|378985416|ref|YP_005248572.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. T000240]
 gi|378990152|ref|YP_005253316.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. UK-1]
 gi|379702079|ref|YP_005243807.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. ST4/74]
 gi|383497502|ref|YP_005398191.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 798]
 gi|386592516|ref|YP_006088916.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. B182]
 gi|418760331|ref|ZP_13316488.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. CVM 35185]
 gi|418764694|ref|ZP_13320789.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. CVM 35199]
 gi|418773020|ref|ZP_13329012.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. CVM 21539]
 gi|418779570|ref|ZP_13335469.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. CVM 35188]
 gi|418783881|ref|ZP_13339725.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. CVM 21559]
 gi|418787833|ref|ZP_13343632.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. CVM 19447]
 gi|418793504|ref|ZP_13349233.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. CVM 19449]
 gi|418799220|ref|ZP_13354887.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. CVM 19567]
 gi|418800549|ref|ZP_13356200.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. CVM 35202]
 gi|418806019|ref|ZP_13361593.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. CVM 21550]
 gi|418809924|ref|ZP_13365467.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. CVM 22513]
 gi|418816042|ref|ZP_13371536.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. CVM 21538]
 gi|418823625|ref|ZP_13379032.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. CVM 22425]
 gi|418829909|ref|ZP_13384873.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. CVM N18486]
 gi|418836846|ref|ZP_13391728.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. CVM N1543]
 gi|418841833|ref|ZP_13396648.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. CVM 21554]
 gi|418847802|ref|ZP_13402543.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. CVM 37978]
 gi|418852649|ref|ZP_13407348.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. CVM 19593]
 gi|418867304|ref|ZP_13421763.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. CVM 4176]
 gi|419731890|ref|ZP_14258798.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. 41579]
 gi|419735512|ref|ZP_14262385.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. 41563]
 gi|419737099|ref|ZP_14263923.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. 41573]
 gi|419741681|ref|ZP_14268359.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. 41566]
 gi|419748188|ref|ZP_14274687.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. 41565]
 gi|419787855|ref|ZP_14313557.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. Levine 1]
 gi|419793529|ref|ZP_14319150.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. Levine 15]
 gi|421569892|ref|ZP_16015588.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. CFSAN00322]
 gi|421575116|ref|ZP_16020730.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. CFSAN00325]
 gi|421580457|ref|ZP_16026015.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. CFSAN00326]
 gi|421584143|ref|ZP_16029653.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. CFSAN00328]
 gi|422027037|ref|ZP_16373383.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. STm1]
 gi|422032071|ref|ZP_16378188.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. STm2]
 gi|427553706|ref|ZP_18928682.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. STm8]
 gi|427571262|ref|ZP_18933399.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. STm9]
 gi|427591970|ref|ZP_18938198.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. STm3]
 gi|427615169|ref|ZP_18943082.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. STm4]
 gi|427639399|ref|ZP_18947964.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. STm6]
 gi|427657058|ref|ZP_18952713.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. STm10]
 gi|427662369|ref|ZP_18957674.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. STm11]
 gi|427675894|ref|ZP_18962491.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. STm12]
 gi|20532254|sp|Q8ZMK6.1|SYA_SALTY RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|16421372|gb|AAL21707.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|194402019|gb|ACF62241.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|194408310|gb|ACF68529.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|195633250|gb|EDX51664.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|197243057|gb|EDY25677.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|205335995|gb|EDZ22759.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|261247963|emb|CBG25796.1| AlaRS [Salmonella enterica subsp. enterica serovar Typhimurium str.
           D23580]
 gi|267994942|gb|ACY89827.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 14028S]
 gi|301159387|emb|CBW18905.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. SL1344]
 gi|312913845|dbj|BAJ37819.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. T000240]
 gi|321223380|gb|EFX48446.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. TN061786]
 gi|323131178|gb|ADX18608.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. ST4/74]
 gi|332989699|gb|AEF08682.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. UK-1]
 gi|380464323|gb|AFD59726.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 798]
 gi|381290521|gb|EIC31785.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. 41579]
 gi|381293836|gb|EIC34976.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. 41563]
 gi|381307138|gb|EIC48004.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. 41573]
 gi|381314942|gb|EIC55707.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. 41565]
 gi|381315048|gb|EIC55811.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. 41566]
 gi|383799557|gb|AFH46639.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. B182]
 gi|392616888|gb|EIW99316.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. Levine 15]
 gi|392618791|gb|EIX01183.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. Levine 1]
 gi|392730277|gb|EIZ87522.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. CVM 21539]
 gi|392742439|gb|EIZ99527.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. CVM 35199]
 gi|392742959|gb|EJA00037.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. CVM 35185]
 gi|392751983|gb|EJA08926.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. CVM 35188]
 gi|392756165|gb|EJA13063.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. CVM 21559]
 gi|392764194|gb|EJA20996.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. CVM 19567]
 gi|392764627|gb|EJA21425.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. CVM 19449]
 gi|392764742|gb|EJA21536.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. CVM 19447]
 gi|392782652|gb|EJA39283.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. CVM 22513]
 gi|392783423|gb|EJA40044.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. CVM 21550]
 gi|392783688|gb|EJA40303.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. CVM 35202]
 gi|392785616|gb|EJA42187.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. CVM 22425]
 gi|392790645|gb|EJA47139.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. CVM 21538]
 gi|392799968|gb|EJA56207.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. CVM N1543]
 gi|392802703|gb|EJA58912.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. CVM N18486]
 gi|392807903|gb|EJA63966.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. CVM 21554]
 gi|392824309|gb|EJA80096.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. CVM 37978]
 gi|392829053|gb|EJA84737.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. CVM 19593]
 gi|392839437|gb|EJA94977.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. CVM 4176]
 gi|402520213|gb|EJW27567.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. CFSAN00326]
 gi|402522768|gb|EJW30088.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. CFSAN00325]
 gi|402525928|gb|EJW33210.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. CFSAN00322]
 gi|402531483|gb|EJW38694.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. CFSAN00328]
 gi|414015292|gb|EKS99108.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. STm1]
 gi|414016286|gb|EKT00059.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. STm8]
 gi|414016974|gb|EKT00724.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. STm2]
 gi|414029536|gb|EKT12693.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. STm9]
 gi|414031083|gb|EKT14158.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. STm3]
 gi|414034613|gb|EKT17538.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. STm4]
 gi|414044461|gb|EKT26903.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. STm6]
 gi|414044990|gb|EKT27417.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. STm10]
 gi|414050199|gb|EKT32380.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. STm11]
 gi|414057442|gb|EKT39196.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. STm12]
          Length = 876

 Score =  598 bits (1542), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 356/916 (38%), Positives = 514/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT    +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  + +A+ + TGA     K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIEAVAKVTGATDLGNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F +ADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  +++V
Sbjct: 283 VIADHIRSCAFLVADGVLPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIEV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    ELK+++A + +++  EE  F +TL +G+    +    +QG  L G+ AF L+DT
Sbjct: 342 MGSAGEELKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + +E++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   +F V + Q YG  + H+G L+ GA    VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGAGFTFAVDDTQKYGQAIGHLGKLSAGA--LKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + P  +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVAQKGSLVSDKVLRFDFSHNEAMKPSEIREVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLDAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A GIRRI AVT   A     A      ++         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGIRRIEAVTGEGAMATVHAQSDRLNDIAHLLKGDSQN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
              K+   L    Q+ K  +++ ++    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LGDKVRAVLERTRQLEKELQQLKDQ--AAAQESANLSSKAVDLNGVKLLVSEL-AGIEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  V+V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTVIVLAT-VVEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|161615724|ref|YP_001589688.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi B str. SPB7]
 gi|205830199|sp|A9N0C1.1|SYA_SALPB RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|161365088|gb|ABX68856.1| hypothetical protein SPAB_03515 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
          Length = 876

 Score =  598 bits (1542), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 356/916 (38%), Positives = 514/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT    +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGAMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  + +A+ + TGA     K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIEAVAKVTGATDLGNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F +ADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  +++V
Sbjct: 283 VIADHIRSCAFLVADGVLPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIEV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    ELK+++A + +++  EE  F +TL +G+    +    +QG  L G+ AF L+DT
Sbjct: 342 MGSAGEELKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + +E++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   +F V + Q YG  + H+G L+ GA    VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGAGFTFSVDDTQKYGQAIGHLGKLSAGA--LKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + P  +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVAQKGSLVSDKVLRFDFSHNEAMKPSEIREVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLDAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A GIRRI AVT   A     A      ++         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGIRRIEAVTGEGAMATVHAQSDRLNDIAHLLKGDSQN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
              K+   L    Q+ K  +++ ++    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LGDKVRAVLERTRQLEKELQQLKDQ--AAAQESANLSSKAVDLNGVKLLVSEL-AGIEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  V+V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTVIVLAT-VVEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|418843370|ref|ZP_13398167.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. CVM 19443]
 gi|418856881|ref|ZP_13411517.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. CVM 19470]
 gi|418862499|ref|ZP_13417039.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. CVM 19536]
 gi|392816706|gb|EJA72628.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. CVM 19443]
 gi|392835766|gb|EJA91357.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. CVM 19470]
 gi|392835901|gb|EJA91490.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. CVM 19536]
          Length = 876

 Score =  598 bits (1542), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 355/916 (38%), Positives = 515/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT    +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  + +A+ + TGA     K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIEAVAKVTGATDLGNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F +ADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  +++V
Sbjct: 283 VIADHIRSCAFLVADGVLPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIEV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    ELK+++A + +++  EE  F +TL +G+    +    +QG  L G+ AF L+DT
Sbjct: 342 MGSAGEELKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + +E++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   +F V + Q YG  + H+G L+ GA    VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGAGFTFAVDDTQKYGQAIGHLGKLSAGA--LKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + P  +R++E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVAQKGSLVSDKVLRFDFSHNEAMKPSEIRQVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  A+   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLDAARA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A GIRRI AVT   A     A      ++         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGIRRIEAVTGEGAMATVHAQSDRLNDIAHLLKGDSQN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
              K+   L    Q+ K  +++ ++    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LGDKVRAVLERTRQLEKELQQLKDQ--AAAQESANLSSKAVDLNGVKLLVSEL-AGIEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  V+V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTVIVLAT-VVEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|329894416|ref|ZP_08270263.1| Alanyl-tRNA synthetase [gamma proteobacterium IMCC3088]
 gi|328923063|gb|EGG30387.1| Alanyl-tRNA synthetase [gamma proteobacterium IMCC3088]
          Length = 866

 Score =  598 bits (1542), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 358/915 (39%), Positives = 519/915 (56%), Gaps = 79/915 (8%)

Query: 61  TKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLT 120
            ++R+ F  +FE + H    SS +VP NDPTLLF NAGMNQ+K  FLG+ +P        
Sbjct: 4   VEIREAFLSYFESQGHTRVASSSLVPENDPTLLFTNAGMNQFKDTFLGS-EPR----DYV 58

Query: 121 RACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYR 180
           RA ++Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI++AW  LT+V  
Sbjct: 59  RATSSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIKFAWTFLTEVLG 118

Query: 181 LPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFGCKDNFWEMGDTGPCGP 238
           LP DRL+ T            D+EA DIW+K +   A R      +DNFW+MGDTGPCGP
Sbjct: 119 LPEDRLWVTVH--------VSDDEAADIWIKEMGVSAERFSRLD-EDNFWQMGDTGPCGP 169

Query: 239 CSEIHYDRTGNRDAA--SLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGF 296
            SEI YD   +         N+D    IEIWN+VF+QFNR++ G L PLP   VDTG+G 
Sbjct: 170 SSEIFYDHGADVPGGPPGSENDDLDRYIEIWNLVFMQFNRDASGELHPLPKPSVDTGMGL 229

Query: 297 ERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRT 356
           ER+ +++QN  SNY+ D+F  +  A  QA               + +D + RV+ADHIR+
Sbjct: 230 ERIAAVMQNVHSNYEIDLFQALIKAAAQAVNCN-----------NLLDNSLRVIADHIRS 278

Query: 357 LSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPEL 416
            SF I DG  PGNEGR YVLRRI+RRAVR+G++ L A + FF  LV+ +   MG+ +PEL
Sbjct: 279 CSFLIVDGVVPGNEGRGYVLRRIIRRAVRHGNK-LGATEPFFYKLVDALSAQMGEAYPEL 337

Query: 417 KQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLT 476
            Q+   + +++  EE  F KTL  G++  +++ + +QG  + G   F L+DTYGFP+DLT
Sbjct: 338 AQQAGRVAQVLLQEEQQFAKTLDNGMQILEESLEGLQGGEIPGDIVFKLYDTYGFPVDLT 397

Query: 477 QLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDS 536
             +A ERGL +D+ G++ AM  A++R+RS    Q GG  V+D   T AL        + +
Sbjct: 398 NDIARERGLTLDMAGYDEAM--AKQRARS----QEGGKFVVDYSKTIAL--------EGA 443

Query: 537 FKFIWFQDHKS--VIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGL 594
            +F+ + D K+   ++ I    E + ++  G +  +V   + FYAE GGQ  D G +   
Sbjct: 444 TEFLGYSDAKASGTVEVIIVDGEKVSTLAAGQQGVVVFDRTPFYAESGGQTGDTGGLTAP 503

Query: 595 FGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFA 654
             S  V +    G   +H+  +   +G  +V   V  ++D   R  I  NH+ TH+L+ A
Sbjct: 504 GLSARVLDTTKQGD--LHLHHVHVESGELAVAASVSMQIDEHLRDQIRANHSATHLLHAA 561

Query: 655 LREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATL 714
           LR+VLG HV QKGS+V  E+LRFDFSH  PV  + L ++ +IVN Q+ A  +V ++   +
Sbjct: 562 LRQVLGGHVQQKGSLVTAERLRFDFSHSAPVTADELAQLNAIVNAQVMANTEVSTRLMNM 621

Query: 715 AEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTRE 774
            EA    G  A+FGE Y D VRV+A+G                S S ELCGGTH+  T +
Sbjct: 622 DEA-VQAGAMALFGEKYGDEVRVLAMGTD--------------SFSVELCGGTHVGRTGD 666

Query: 775 AEAFALLSEEGIAKGIRRITAVTTGLAY-------KAFEAACSLEKEVDDASKIEGSLLE 827
              F ++SE GIA G+RRI AVT   A         A +  C LE +    + +      
Sbjct: 667 IGVFRIVSESGIAAGVRRIEAVTGVGALAEINSLDTALQGVC-LELKAQPENVVSRVAAM 725

Query: 828 KNQVRKAQKKVAEENLQKAVKVATETA-EAAASNGKPFCISRVEVGLDAAAVREAVLKVI 886
           + Q+R+ +K++ +  ++ A     E A +A    G P   +R++ G DA A+R+AV ++ 
Sbjct: 726 RGQIRELEKQIDQLKMKMAQAAGGELASQAIEVRGVPVLAARLD-GADAKALRDAVDQMK 784

Query: 887 EQKGMPVMVFSTDETTNKAVVCAGVPEK-SDQSKQLEVSEWLTAALQPLKGRCGKGKGGL 945
            + G  V++ ++    +K V+ AGV +  +D+ K  ++       L    G  G G+  +
Sbjct: 785 SKLGDSVVLLAS-VVDDKIVLAAGVSKAVTDRVKAGDLMREFATRL----GGKGGGRPDM 839

Query: 946 ASGQGTDAAQVTPAM 960
           A G GTD A +   +
Sbjct: 840 AQGGGTDVAALNDVL 854


>gi|170765841|ref|ZP_02900652.1| alanyl-tRNA synthetase [Escherichia albertii TW07627]
 gi|170124987|gb|EDS93918.1| alanyl-tRNA synthetase [Escherichia albertii TW07627]
          Length = 876

 Score =  598 bits (1542), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 360/916 (39%), Positives = 514/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  K +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 GLPKERLWVTVY--------ESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEDLKRQQALVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + ++ +  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELSGKVTALFVDGKAVDVINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   SF V + Q YG  + HIG L   AG  +VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGSLNVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A G+RRI AVT   A     A      E+         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAIATVHADSDRLGEIAHLLKGDSNN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            A K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LADKVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAIDVNGVKLLVSELS-GVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTIIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|334147010|ref|YP_004509939.1| alanyl-tRNA synthetase [Porphyromonas gingivalis TDC60]
 gi|333804166|dbj|BAK25373.1| alanyl-tRNA synthetase [Porphyromonas gingivalis TDC60]
          Length = 876

 Score =  598 bits (1541), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 328/749 (43%), Positives = 441/749 (58%), Gaps = 64/749 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R++F  FF  K H    S+P+V   DPTL+F NAGMNQ+K I LG    NT+ +K 
Sbjct: 4   SKEIRESFKTFFASKGHKIVPSAPMVIKGDPTLMFTNAGMNQFKDIILG----NTE-AKY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           TR  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAIEWAWE L  V 
Sbjct: 59  TRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAIEWAWEYLVSVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
            L   RLYAT F G+ + GL  D+EA   W +FLP  R++     DNFWEMGDTGPCGPC
Sbjct: 119 GLDPQRLYATVFEGNPEEGLDRDDEAASYWAQFLPEERIINGNKHDNFWEMGDTGPCGPC 178

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D   + + A      L+N   P  IEIWN+VF+Q+NR++D SL PLP K +DTG+
Sbjct: 179 SEIHIDLRSDEERAQINGLELINKSHPQVIEIWNLVFMQYNRKADSSLTPLPHKVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF P+   +   TG       +G  +    D+A RVVADHI
Sbjct: 239 GFERLCMALQGKTSNYDTDVFQPLIRTLATMTG-------IGYGEDSASDIAMRVVADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++FAI DG  P N    YV+RRILRRAVRYG   L  ++ F   L+  ++  MGD +P
Sbjct: 292 RTIAFAITDGQLPSNAKAGYVIRRILRRAVRYGYTFLHCREAFMYRLLPTLIDTMGDAYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG---KVLSGQDAFILWDTYGF 471
           EL+ +   I  +I  EE SF +TL  GI   +K   D +     VL G  AF L+DT+GF
Sbjct: 352 ELQAQRELISRVIKEEEESFLRTLETGIRLLEKKIADNKAAGSTVLDGAAAFELYDTFGF 411

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT L+  E G+ VD  GF+  M + +ER+R+A   +AG  +V+    +      G  
Sbjct: 412 PLDLTALILSENGMTVDESGFDTEMQKQKERARNAAAVEAGDWVVLREGESKF---SGYD 468

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            T+   + + ++  K   K  +                +VL+ + FYAE GGQ+ D G +
Sbjct: 469 FTETETEILRYRQVKQKNKEYFQ---------------VVLSDTPFYAEMGGQVGDSGQL 513

Query: 592 EGLFGSFY-VRNVQIYGGFVIHI-GSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
               G  Y V + +      +H+   L E     S  +  + +++ ++R+    NHT TH
Sbjct: 514 IDESGIAYDVFDTKRENNLSVHLMKKLPE-----STTDTFVARINQNKRRQAEANHTATH 568

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +L+ ALREVLG HV QKGS V PE LRFDFSH   + PE +R++E +V+E+I+A+     
Sbjct: 569 LLHEALREVLGTHVGQKGSFVSPEVLRFDFSHFGKMSPEEIRKVEELVSERIRADFQREE 628

Query: 710 -KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
            ++  +AEA+ + G  A+FGE Y + VRV+  G                  S ELCGGTH
Sbjct: 629 FRDVPIAEAQAM-GAMALFGEKYGEEVRVLKYGS-----------------SVELCGGTH 670

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVT 797
           + +T     F +++E  IA G+RRI AVT
Sbjct: 671 IPSTGMIGTFRIVTESSIASGVRRIEAVT 699


>gi|395803303|ref|ZP_10482551.1| alanyl-tRNA ligase [Flavobacterium sp. F52]
 gi|395434615|gb|EJG00561.1| alanyl-tRNA ligase [Flavobacterium sp. F52]
          Length = 879

 Score =  598 bits (1541), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 337/768 (43%), Positives = 451/768 (58%), Gaps = 54/768 (7%)

Query: 63  VRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRA 122
           VR  F  FFE K H    S+P+V  +DPTL+F N+GM Q+K  FLG   P     K  R 
Sbjct: 6   VRKQFLDFFESKGHTIVPSAPIVLKDDPTLMFNNSGMAQFKEFFLGNGTP-----KSPRI 60

Query: 123 CNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLP 182
            +TQKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWELLT+VY++P
Sbjct: 61  ADTQKCLRVSGKHNDLEEVGIDTYHHTMFEMLGNWSFGDYFKKEAINWAWELLTEVYKIP 120

Query: 183 ADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPCSEI 242
            + LY + F G ++  +  D EA DIW   +   R++    KDNFWEMGD GPCGPCSEI
Sbjct: 121 KENLYVSVFEGSKEDNVPFDQEAWDIWKTLIDEDRIILGNKKDNFWEMGDQGPCGPCSEI 180

Query: 243 HYDRTGNRDAA-----SLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFE 297
           H D     + A     SLVNND P  +EIWN VF++FNR++DGSL+ LPA+HVDTG+GFE
Sbjct: 181 HVDLRPEEEKALVSGKSLVNNDHPQVVEIWNNVFMEFNRKADGSLEKLPAQHVDTGMGFE 240

Query: 298 RLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVG--ADDADKVDMAYRVVADHIR 355
           RL   LQ K SNYDTDVFMP+   I+  TGA+  +  V   +++ +K+++A RVVADH+R
Sbjct: 241 RLCMALQGKTSNYDTDVFMPLIREIETITGAKYTTNDVTGISEEQNKMNIAIRVVADHVR 300

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPE 415
            ++FAIADG  P N G  YV+RRILRRA+RYG   L  ++ F   LV  + + MGD FPE
Sbjct: 301 AVAFAIADGQLPSNTGAGYVIRRILRRAIRYGFTFLGTKEPFIFKLVETLSEQMGDSFPE 360

Query: 416 LKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDL 475
           ++ ++A    +I  EE SF KTL +G+        +     + G+ AF L+DTYGFP+DL
Sbjct: 361 IRTQKALCSNVIREEENSFLKTLDQGLVLLDAVISNNNTDTVDGKKAFELYDTYGFPIDL 420

Query: 476 TQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDD 535
           T L+  ERGL +D EGF   +   +ERSR+A    AG                 V+  DD
Sbjct: 421 TALILSERGLKLDEEGFQEQLQLQKERSRAASKVTAG--------------DWNVIVEDD 466

Query: 536 SFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLF 595
             +F+ +      +K   T    +ES   G    +V  ++ FY E GGQ  D+G++E   
Sbjct: 467 IQEFVGYDRLSQQVK--ITKYRRVESAKDGEIFQLVFNATPFYGESGGQTGDKGYLEAQN 524

Query: 596 GSF-YVRNVQIYGGFVIHIG-SLTEG-AGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLN 652
           G   Y+ + +      IH+  SL E   G F+        VD ++R   + NH+ TH+L+
Sbjct: 525 GDIVYIIDTKKENNQTIHLAKSLPENLTGTFN------AVVDANQRAKTSSNHSATHLLH 578

Query: 653 FALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEA 712
            ALR++LG H++QKGS+V    LRFDFSH   V  E L  +E+ VN +I+  L +  K A
Sbjct: 579 QALRKILGTHIEQKGSMVRNASLRFDFSHFAKVSDEELVEVENFVNARIRESLPLIEKRA 638

Query: 713 TLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNT 772
              E     G  A+FGE Y D VR +  G                  S ELCGGTH++NT
Sbjct: 639 IPKEQALEEGAIALFGEKYGDLVRTIKFGD-----------------SVELCGGTHVANT 681

Query: 773 REAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK 820
            +   F ++SE  +A GIRRI A+T+  A + FE+      E+ +A K
Sbjct: 682 SDIWHFKIISEGAVAAGIRRIEAITSEAAKEYFESQAVSLAEIKEALK 729


>gi|187735876|ref|YP_001877988.1| alanyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
 gi|205829974|sp|B2UKT4.1|SYA_AKKM8 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|187425928|gb|ACD05207.1| alanyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
          Length = 942

 Score =  598 bits (1541), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 358/831 (43%), Positives = 474/831 (57%), Gaps = 83/831 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           AT++R +F  FF +K H    S+ ++P   P LLF NAGMNQ+ P FLG   P    +  
Sbjct: 4   ATEIRQSFLDFFREKQHTVVPSASLMP-QSPGLLFTNAGMNQFVPYFLGVWTPPWTPA-- 60

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            RA +TQKCIRAGGKHNDL+DVG D+YHHTFFEMLGNWSFGDYFK EAI WAWEL+ + +
Sbjct: 61  -RATDTQKCIRAGGKHNDLEDVGYDSYHHTFFEMLGNWSFGDYFKREAIRWAWELVVERW 119

Query: 180 RLPADRLYATYFGGDEKAGLAP--DNEARDIWLKFL------PASRVLPFGCKDNFWEMG 231
             PA+RLYAT +  D+  G     D EA D W +        P   ++    KDNFW MG
Sbjct: 120 GFPAERLYATVYAPDKSKGDPGEFDREAWDFWAELFRSRGLDPDVHIVHGNVKDNFWMMG 179

Query: 232 DTGPCGPCSEIHYDRT--GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKH 289
           +TGPCGPCSE+H D T  GN    SLVN D   CIEIWN+VFIQ+N ESDGS++ LPA H
Sbjct: 180 ETGPCGPCSELHVDLTPEGN-TKGSLVNKDSDQCIEIWNLVFIQYNAESDGSMRNLPACH 238

Query: 290 VDTGLGFERLTSILQ---------NKMSNYDTDVFMPIFDAIQQATGAR-------PYSG 333
           VDTG+GFER  SI+Q          K SNY TDVF P+FD ++  +G +       P S 
Sbjct: 239 VDTGMGFERACSIMQCTNGFKDFSRKPSNYATDVFRPLFDRLEVLSGRKYADVYPAPGSK 298

Query: 334 KVGADDADKVD-MAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLK 392
           +V A+D    + +A+RV+ADH+RTLSF+IADG  PGN GR YVLRRILRRAVRYG  +  
Sbjct: 299 RVDAEDGTLQEAIAFRVIADHLRTLSFSIADGILPGNNGRNYVLRRILRRAVRYGRRLGF 358

Query: 393 AQDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV 452
            Q  F   LV+ +V+  G VFPEL  R   ++E++  EEASF +TL +G+E F   A+  
Sbjct: 359 TQP-FLAELVDTLVESFGQVFPELAARATTVKEVLNREEASFNETLDRGLELFD--AETA 415

Query: 453 QGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAG 512
               +SG+ AF L+DTYGFP+DLT L+AEERGL +D+E FN  M+E RER+R+A+  +  
Sbjct: 416 SAGKVSGEFAFKLYDTYGFPIDLTALLAEERGLDIDMERFNRLMEEQRERARAARKSEVV 475

Query: 513 GAIVMDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVL 572
            A+ +  DA        V   D+                    +  +E    G+ + I+ 
Sbjct: 476 RALDLKTDAVTEFTGYDV---DE------------------CAATVLEVSRQGDSLFIIT 514

Query: 573 ASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICK 632
             + FYAE GGQ+ D G IE    S++V  VQ  G    H+     G      G+ V   
Sbjct: 515 DKTPFYAEMGGQVSDAGLIEIGGESYHVMAVQQIGNARAHVVEARPGL-EVKPGDRVHLS 573

Query: 633 VDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRR 692
           +D +RR+ I  +HT TH+L+ AL +V+     Q+GS V  ++LRFDF +   V P+ LR 
Sbjct: 574 IDAERRRRIEAHHTATHLLHCALHQVVSPDAAQQGSFVSEDRLRFDF-NSSAVSPDQLRL 632

Query: 693 IESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPE 752
           IE  VN  I+  L V   E   A+ K    +   FG+ Y D VRVV +G   + L     
Sbjct: 633 IEEKVNGWIEESLPVHCTERAYADVKGNAAIAQFFGDKYGDVVRVVQVGGCRDGLDG--- 689

Query: 753 NKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLE 812
                 +S E CGGTH++NT+    F + SE  IA G+RRI A+T        +AA  + 
Sbjct: 690 ------VSMEFCGGTHIANTKNIGLFKIKSEGAIASGVRRIEAMTG-------DAALEMI 736

Query: 813 KEVDDASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKP 863
           ++   A  +E        + KA +K+ E N + A  +  E        GKP
Sbjct: 737 RQHVVAKSLE--------IAKAVEKIKEVNYELA-DMGLEQVPVPTIEGKP 778


>gi|410646584|ref|ZP_11357034.1| alanyl-tRNA synthetase [Glaciecola agarilytica NO2]
 gi|410133756|dbj|GAC05433.1| alanyl-tRNA synthetase [Glaciecola agarilytica NO2]
          Length = 865

 Score =  598 bits (1541), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 364/932 (39%), Positives = 518/932 (55%), Gaps = 95/932 (10%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF DK H    SS +VP +DPTLLF NAGMNQ+K +FLGT     +  K TR
Sbjct: 7   QIRQAFLNFFADKGHQKVSSSSLVPSDDPTLLFTNAGMNQFKDVFLGT-----EQRKYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A ++Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AW  LT+  +L
Sbjct: 62  ATSSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQQAIAYAWTFLTQELKL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFGCKDNFWEMGDTGPCGPC 239
           P ++L  T +        + D+EA DIW   +  P  +++     DNFW MGDTGPCGPC
Sbjct: 122 PKEKLLVTIY--------SEDDEAFDIWHNEIGVPKEKIIRIATSDNFWSMGDTGPCGPC 173

Query: 240 SEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFE 297
           SEI YD   +           D    IEIWN+VF+QFNR+++G + PLP   +DTG+G E
Sbjct: 174 SEIFYDHGEHIWGGPPGTPEEDGDRFIEIWNLVFMQFNRQANGDMLPLPKPSIDTGMGLE 233

Query: 298 RLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTL 357
           R+++ILQN  SNY+ D+F  +  A  +  G                D + RVVADHIR+ 
Sbjct: 234 RISAILQNVHSNYEIDIFQNLIKATAEIVGTSSLE-----------DKSLRVVADHIRSC 282

Query: 358 SFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELK 417
           SF I+DG  P NEGR YVLRRI+RRAVR+G++ L A+  FF  LV  +   MGD +PEL 
Sbjct: 283 SFLISDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAKGVFFYKLVAALATEMGDAYPELN 341

Query: 418 QREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQ 477
           ++ A I +++  EE  F +TL +G+     A  +++GKV+ G+  F L+DTYGFP DLT 
Sbjct: 342 EQRAVIEKVLRVEEEQFSRTLERGMLILNDALSELEGKVVPGELVFKLYDTYGFPADLTN 401

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSF 537
            +A E+GL +D EGF  AM E R+R++ A N         D D    L       +D   
Sbjct: 402 DVAREKGLSIDEEGFEQAMAEQRKRAQKASN--------FDLDYNEQLR------SDLES 447

Query: 538 KFIWF--QDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLF 595
            F+ +  + + + IK I+   + +  +  G E  I+L  S FYAE GGQ  D G +    
Sbjct: 448 VFVGYELEQNTAQIKEIFVQGQSVAEITAGTEGTIILDESPFYAEAGGQAGDAGTLVKDS 507

Query: 596 GSFYVRNVQIYGGFVIHIG-SLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFA 654
           G F V++    G  + H G +L+E      VG+ V   V+  RR  I  NH+ TH+++ A
Sbjct: 508 GGFEVQDTVKLGKAIAHKGAALSE----LKVGDSVQANVNGARRHAIKLNHSATHLMHAA 563

Query: 655 LREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATL 714
           L+ VLG+HV+QKGS+V PE+LRFDFSH + +  E +  +E++VNEQI A   + +K   L
Sbjct: 564 LKSVLGEHVNQKGSLVQPERLRFDFSHYEAMTKEQVLAVETMVNEQILANHALQTKLMGL 623

Query: 715 AEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTRE 774
            +AK   G  A+FGE Y D VRVV++G                  S ELCGGTH++ T +
Sbjct: 624 EQAKEA-GAMALFGEKYDDDVRVVSMG----------------DFSMELCGGTHVARTGD 666

Query: 775 AEAFALLSEEGIAKGIRRITAVT--TGLAY---KAFE-AACSLEKEVDDASKIEGSLLEK 828
              F ++SE GIA G+RRI AVT  T L Y   +AFE  + S   + D  +  E  L   
Sbjct: 667 IGLFKIISESGIASGVRRIEAVTGITALQYVQQQAFELTSISAVLKTDVTTVGERVLQLI 726

Query: 829 NQVRKAQKKVAEENLQKAVKVATETAEAAAS---------NGKPFCISRVEVGLDAAAVR 879
            Q +  +K+V         K+  E A +A S         NG       V+ G+++ A+R
Sbjct: 727 EQTKTLEKEV--------TKLKQEIANSAGSDLLSQINEINGVKVLSYHVQ-GIESGALR 777

Query: 880 EAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCG 939
             +  +  Q G  V++     T  K  + AGV +  D +++++  E +    Q + G+ G
Sbjct: 778 TMIDDLKNQIGSGVILLGV-ATGEKVSLIAGVTK--DLTQKVKAGELVNFVAQQVGGKGG 834

Query: 940 KGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
            G+  +A   G+    +  A+    E+   +L
Sbjct: 835 -GRPDMAQAGGSQPENLDSAIASVNEWLQERL 865


>gi|452123349|ref|YP_007473597.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Javiana str. CFSAN001992]
 gi|451912353|gb|AGF84159.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Javiana str. CFSAN001992]
          Length = 876

 Score =  597 bits (1540), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 355/916 (38%), Positives = 516/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT    +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGEHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  + +A+ + TGA     K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIEAVAKVTGATDLGNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F +ADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  +++V
Sbjct: 283 VIADHIRSCAFLVADGVLPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIEV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    ELK+++A + +++  EE  F +TL +G+    +    +QG  L G+ AF L+DT
Sbjct: 342 MGSAGEELKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + +E++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVEAINAGQEAVVVLDRTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   +F V + Q YG  + H+G L+ GA    VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGAGFTFAVDDTQKYGQAIGHLGKLSAGA--LKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + P  +R++E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVAQKGSLVSDKVLRFDFSHNEAMKPSEIRQVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  A+   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLDAARA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A GIRRI AVT   A     A      ++         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGIRRIEAVTGEGAMATVHAQSDRLNDIAHLLKGDSQN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
              K+   L    Q+ K  +++ ++    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LGDKVRAVLERTRQLEKELQQLKDQ--AAAQESANLSSKAVDLNGVKLLVSEL-AGIEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  + +Q G  V+V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKDQLGSTVIVLAT-VVEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|340000386|ref|YP_004731270.1| alanyl-tRNA synthetase [Salmonella bongori NCTC 12419]
 gi|339513748|emb|CCC31505.1| alanyl-tRNA synthetase [Salmonella bongori NCTC 12419]
          Length = 876

 Score =  597 bits (1540), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 356/916 (38%), Positives = 514/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT    +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNY+ D+F  + +A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYEIDLFRTLIEAVAKVTGASDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F +ADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  +++V
Sbjct: 283 VIADHIRSCAFLVADGVLPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIEV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    ELK+++A + +++  EE  F +TL +G+    +    +QG  L G+ AF L+DT
Sbjct: 342 MGSAGEELKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRCRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + +E +  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVEEISAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   +F V + Q YG  + H+G L  GA    VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGTGFTFAVNDTQKYGQAIGHLGKLAAGA--LKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + P  +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGAHVAQKGSLVSDKVLRFDFSHNEAMKPSEIREVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETHIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH + T +   F +LSE G A G+RRI AVT   A     A      ++         +
Sbjct: 668 GTHATRTGDIGLFRILSESGTAAGVRRIEAVTGEGAMATVHAQSDRLNDIAHLLKGDSQN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
              K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LGDKVRAVLERTRQLEKELQQLKEQ--AAAQESANLSSKAVDLNGVKLLVSEL-AGVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  V+V +T  +  K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSAVIVLAT-VSEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|238909593|ref|ZP_04653430.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Tennessee str. CDC07-0191]
          Length = 876

 Score =  597 bits (1540), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 355/916 (38%), Positives = 514/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT    +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  + +A+ + TGA     K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIEAVAKVTGATDLGNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F +ADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  +++V
Sbjct: 283 VIADHIRSCAFLVADGVLPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIEV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    ELK+++A + +++  EE  F +TL +G+    +    +QG  L G+ AF L+DT
Sbjct: 342 MGSAGEELKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + +E++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   +F V + Q YG  + H+G L+ GA    VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGAGFTFAVDDTQKYGQAIGHLGKLSAGA--LKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + P  +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVAQKGSLVSDKVLRFDFSHNEAMKPSEIREVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  A+   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLDAARA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A GIRRI AVT   A     A      ++         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGIRRIEAVTGEGAMATVHAQSDRLNDIAHLLKGDSQN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
              K+   L    Q+ K  +++ ++    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LGDKVRAVLERTRQLEKELQQLKDQ--AAAQESANLSSKAVDLNGVKLLVSEL-AGIEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  V+V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTVIVLAT-VVEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|421846627|ref|ZP_16279773.1| alanyl-tRNA ligase [Citrobacter freundii ATCC 8090 = MTCC 1658]
 gi|411771957|gb|EKS55604.1| alanyl-tRNA ligase [Citrobacter freundii ATCC 8090 = MTCC 1658]
 gi|455643428|gb|EMF22556.1| alanyl-tRNA ligase [Citrobacter freundii GTC 09479]
          Length = 875

 Score =  597 bits (1540), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 356/913 (38%), Positives = 509/913 (55%), Gaps = 85/913 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT    +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQYAWELLTGENWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAAYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSAEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNY+ D+F  + +++ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYEIDLFRSLIESVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A+D FF  LV  +V V
Sbjct: 283 VIADHIRSCAFLIADGVVPSNENRGYVLRRIIRRAVRHGN-MLGAKDTFFYKLVGPLVDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    ELK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEELKRQQAMVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A +   
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNAMIRVD 453

Query: 529 GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDE 588
           G       FK     +    + A++   + ++++  G +  +VL  + FYAE GGQ+ D+
Sbjct: 454 GA----SEFKGYEQLELNGKVTALFVDGKAVDAINAGQDAVVVLDQTPFYAESGGQVGDK 509

Query: 589 GFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
           G ++G   +F V + Q YG  + HIG L+  AG   +G+ V   VD  RR  I  NH+ T
Sbjct: 510 GELKGAGFAFAVSDTQKYGQAIGHIGKLS--AGSLKIGDAVQADVDEARRARIRLNHSAT 567

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+++ ALR+VLG HV QKGS+V  + LRFDFSH + + P  +R +E +VN QI+  L + 
Sbjct: 568 HLMHAALRQVLGTHVAQKGSLVNDKLLRFDFSHTEAMKPAEIRAVEDLVNAQIRRNLSIE 627

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
           +    L  AK   G  A+FGE Y D VRV+++G                  S ELCGGTH
Sbjct: 628 TNIMDLEAAKA-KGAMALFGEKYDDHVRVLSMG----------------DFSTELCGGTH 670

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------DDAS 819
            S T +   F ++SE G A G+RRI AVT   A +   A      +V         + A 
Sbjct: 671 ASRTGDIGLFRIVSESGTAAGVRRIEAVTGEGAIQTVHAESDRLSDVAQLLKGDSQNIAD 730

Query: 820 KIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVR 879
           K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S +   ++   +R
Sbjct: 731 KVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAVDINGVKLLVSEL-ADVEPKMLR 787

Query: 880 EAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCG 939
             V  +  Q G  V+V +T     K  + AGV +  D + +++  E +    Q + G+ G
Sbjct: 788 TMVDDLKNQLGSTVIVLAT-VVEGKVSLIAGVSK--DVTDRVKAGELVGMVAQQVGGKGG 844

Query: 940 KGKGGLASGQGTD 952
            G+  +A   GTD
Sbjct: 845 -GRPDMAQAGGTD 856


>gi|322514279|ref|ZP_08067338.1| alanine--tRNA ligase [Actinobacillus ureae ATCC 25976]
 gi|322119833|gb|EFX91853.1| alanine--tRNA ligase [Actinobacillus ureae ATCC 25976]
          Length = 874

 Score =  597 bits (1540), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 357/937 (38%), Positives = 522/937 (55%), Gaps = 93/937 (9%)

Query: 61  TKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLT 120
           +++R +F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG      +    T
Sbjct: 5   SEIRQSFLDFFHSKGHTVVPSSSLVPENDPTLLFTNAGMNQFKDVFLGL-----EKRPYT 59

Query: 121 RACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKV-- 178
           RA   Q+C+RAGGKHNDL++VG    HHTFFEM+GN+SFGDYFK +AI++ WE LT +  
Sbjct: 60  RATTAQRCVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKQDAIQFGWEYLTSLQW 119

Query: 179 YRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFWE 229
             LP ++LY T +          D+EA DIW K +  P   ++  G         DNFW 
Sbjct: 120 LGLPKEKLYVTVY--------ETDDEAYDIWNKIVGVPTDHIIRIGDNKGAPYASDNFWA 171

Query: 230 MGDTGPCGPCSEIHYDRTGNRDAASLVNN---DDPTCIEIWNIVFIQFNRESDGSLKPLP 286
           MGDTGPCGPC+EI YD  G+     L      D    IE+WNIVF+QFNR++DG+++ LP
Sbjct: 172 MGDTGPCGPCTEIFYDH-GDTFWGGLPGTPEEDGDRYIEVWNIVFMQFNRQADGTMEKLP 230

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
              VDTG+G ER+T+++Q+  SNY+TD+F  +   +         +G +   D D  + +
Sbjct: 231 KPSVDTGMGLERMTAVMQHVNSNYETDIFQTLIKEV---------AGLLNVTDLD--NKS 279

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            RVVADHIR  S+ IADG  P NEGR YVLRRI+RRAVR+G+ +L A++ FF  LV  + 
Sbjct: 280 LRVVADHIRACSYLIADGVIPSNEGRGYVLRRIIRRAVRHGN-LLGAKEAFFYKLVPTLA 338

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
            VMG     L Q++AHI++ + AEE  F +TL +G+   + A   V+   LSG+ AF L+
Sbjct: 339 TVMGHAGEILTQKQAHIQKTLKAEEEQFARTLERGLALLEDALTKVENNTLSGEVAFKLY 398

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFPLDLT  +  ER + +D  GF   M   RER++++ N           D +    
Sbjct: 399 DTYGFPLDLTADVCRERNITIDEAGFEAEMSAQRERAKASSN--------FGTDYS---- 446

Query: 527 KRGVLATDDSFKFIWFQD--HKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
              V+  D    FI + +   ++ I  +++  + ++++  G    I+L  + FYAE GGQ
Sbjct: 447 --NVIKVDGQTDFIGYDNLEAQATIVGLFSNGKAVDTIHSGESAVIILDQTPFYAEMGGQ 504

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           + D G I      F V + Q YG    H+G LT G+   ++G++V   V+ +RR+ I  N
Sbjct: 505 VGDNGLISTEICEFTVSDTQKYGQVFGHVGQLTSGS--LAIGDKVTAHVEINRRQAITAN 562

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ ALREVLGDHV QKGS+V  + LRFDFS  + +    L  IE IVN  I+  
Sbjct: 563 HSATHLLHSALREVLGDHVAQKGSLVSEDALRFDFSQPEAITKAQLEEIERIVNRNIREN 622

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
           + V  +   +  AK   G  A+FGE Y D VRVV +                   S ELC
Sbjct: 623 IQVVIETMDIESAKQ-KGAMALFGEKYGDVVRVVGM----------------TEFSIELC 665

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKI--- 821
           GGTH+ +T E   F L+SE  +A G+RR+ AVT     KA +   + ++ +  ++++   
Sbjct: 666 GGTHVQHTGEIGLFKLVSEGAVAAGVRRVEAVT---GEKAMDWLHNQQRVIQQSAELLKA 722

Query: 822 -EGSLLEKNQVRKAQKKVAEENLQK-----AVKVATETAEAAAS-NGKPFCISRVEVGLD 874
              SL+EK Q  + + K  E+ LQ+     A +  +E A+ A+  NG    + ++E G++
Sbjct: 723 DSNSLVEKIQQLQDKAKRTEKELQQLKDKFAAQAGSELAKQASQINGVNVIVQKLE-GVE 781

Query: 875 AAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPL 934
             ++R  V  +  Q    ++VF +    +K  +  GV +  D S ++   E + A  Q +
Sbjct: 782 TKSLRTMVDDLKNQFENAIVVFGS-VADDKVNLIVGVTK--DLSSKVNAGELVGAMAQQV 838

Query: 935 KGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
            G+ G G+  +A   G++   +  A+  A E+   KL
Sbjct: 839 GGKGG-GRADMAMAGGSEPQHLDSALKFAQEWIQAKL 874


>gi|212693638|ref|ZP_03301766.1| hypothetical protein BACDOR_03157 [Bacteroides dorei DSM 17855]
 gi|265755936|ref|ZP_06090403.1| alanyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
 gi|212663891|gb|EEB24465.1| alanine--tRNA ligase [Bacteroides dorei DSM 17855]
 gi|263234014|gb|EEZ19615.1| alanyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
          Length = 872

 Score =  597 bits (1539), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 332/747 (44%), Positives = 435/747 (58%), Gaps = 61/747 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++RD+F  FFE K H    S+P+V  +DPTL+F NAGMNQ+K I LG        +K 
Sbjct: 4   AKEIRDSFKSFFESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGN-----HPAKY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWE L  V 
Sbjct: 59  KRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAIGWAWEYLVDVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           ++    LYAT F G  + GL  DNEA   W +FLP   +L     DNFWEMGDTGPCGPC
Sbjct: 119 KIDPKDLYATVFEGSPEEGLERDNEAASYWEQFLPKDHILNGNKHDNFWEMGDTGPCGPC 178

Query: 240 SEIHYDRTGNRDAA-----SLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + A      LVN D P  IEIWN+VF+QFNR++DGSL+ LPAK +DTG+
Sbjct: 179 SEIHIDSRSEEEKAQIPGNQLVNKDHPQVIEIWNLVFMQFNRKADGSLEGLPAKVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF P+  AI +  G        G D  ++ D+A RV+ADHI
Sbjct: 239 GFERLVRTLQGKTSNYDTDVFQPMLKAIAEMAGT-----TYGQD--NQKDIAMRVIADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++F+I DG  P N    YV+RRILRRAVRYG   L  +  F   L+ ++++ MG+ +P
Sbjct: 292 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLIENMGEAYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG---KVLSGQDAFILWDTYGF 471
           EL  ++  I ++I  EE SF +TL  GI    K   D +    K +SG DAF L+DT+GF
Sbjct: 352 ELNAQKILIEKVIKEEEESFLRTLETGIRLLDKTMNDAKAAGKKEISGVDAFTLYDTFGF 411

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E G+ V+ E FN  M + +ER+R+A   + G  I +    T   H  G  
Sbjct: 412 PLDLTELILRENGMTVNEEEFNAEMQKQKERARNAAAVETGDWITIKEGDT---HFVGYD 468

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            T+     + ++  K   + +Y                IVL+ + FYAE GGQ+ D G I
Sbjct: 469 FTEYETSILRYRQIKQKNQTLYQ---------------IVLSDTPFYAESGGQVGDTGVI 513

Query: 592 EGLFGSFYVRNVQIYGGFVIHIG-SLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHM 650
              F +  + + +      IHI   L E      +   ++  VD ++R   A NH+CTH+
Sbjct: 514 VSEFETIEIIDTKKENNLPIHITKKLPE-----HLDVPMMACVDTEKRAACAANHSCTHL 568

Query: 651 LNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSK 710
           L+ ALR+VLG HV+QKGS+V PE LRFDFSH + V  E LR +E +VN +I+  + +   
Sbjct: 569 LDEALRQVLGTHVEQKGSLVTPESLRFDFSHFQKVTDEQLREVEHLVNAKIRENIPLTEY 628

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
                E     G  A+FGE Y D VRVV  G                  S E CGGTH+S
Sbjct: 629 RNLPIEKAKELGAIALFGEKYGDEVRVVQFGN-----------------SIEFCGGTHVS 671

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVT 797
            T +     ++SE  +A G+RRI A+T
Sbjct: 672 ATGKIGMVRIISESSVAAGVRRIEAIT 698


>gi|437840981|ref|ZP_20846494.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. SARB17]
 gi|435296799|gb|ELO73150.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. SARB17]
          Length = 876

 Score =  597 bits (1539), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 356/916 (38%), Positives = 513/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT    +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  + +A+ + TGA     K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIEAVAKVTGATDLGNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F +ADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  +++V
Sbjct: 283 VIADHIRSCAFLVADGVLPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIEV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    ELK+++A + +++  EE  F +TL +G+    +    +QG  L G+ AF L+DT
Sbjct: 342 MGSAGEELKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + +E +  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVEVINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   +F V + Q YG  + H+G L+ GA    VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGAGFTFAVDDTQKYGQAIGHLGKLSAGA--LKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + P  +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVAQKGSLVSDKVLRFDFSHNEAMKPSEIREVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A GIRRI AVT   A     A      ++         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGIRRIEAVTGEGAMATVHAQSDRLNDIAHLLKGDSQN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
              K+   L    Q+ K  +++ ++    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LGDKVRAVLERTRQLEKELQQLKDQ--AAAQESANLSSKAVDLNGVKLLVSEL-AGIEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  V+V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTVIVLAT-VVEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|62181330|ref|YP_217747.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|375115667|ref|ZP_09760837.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SCSA50]
 gi|75481392|sp|Q57KU6.1|SYA_SALCH RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|62128963|gb|AAX66666.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|322715813|gb|EFZ07384.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SCSA50]
          Length = 876

 Score =  597 bits (1539), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 356/916 (38%), Positives = 513/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVSSSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT    +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGAMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  + +A+ + TGA     K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIEAVAKVTGATDLGNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F +ADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  +++V
Sbjct: 283 VIADHIRSCAFLVADGVLPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIEV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    ELK+++A + +++  EE  F +TL +G+    +    +QG  L G+ AF L+DT
Sbjct: 342 MGSAGEELKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + +E +  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVEVINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   +F V + Q YG  + H+G L+ GA    VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGAGFTFAVDDTQKYGQAIGHLGKLSAGA--LKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + P  +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVAQKGSLVSDKVLRFDFSHNEAMKPSEIREVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLDAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A GIRRI AVT   A     A      ++         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGIRRIEAVTGEGAMATVHAQSDRLNDIAHLLKGDSQN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
              K+   L    Q+ K  +++ ++    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LGDKVRAVLERTRQLEKELQQLKDQ--AAAQESANLSSKAVDLNGVKLLVSEL-AGIEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  V+V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTVIVLAT-VVEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|16761603|ref|NP_457220.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. CT18]
 gi|29143087|ref|NP_806429.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. Ty2]
 gi|213052376|ref|ZP_03345254.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E00-7866]
 gi|213426121|ref|ZP_03358871.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E02-1180]
 gi|213579902|ref|ZP_03361728.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-0664]
 gi|213622611|ref|ZP_03375394.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-2068]
 gi|213852307|ref|ZP_03381839.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. M223]
 gi|289824467|ref|ZP_06544043.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. E98-3139]
 gi|378960884|ref|YP_005218370.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. P-stx-12]
 gi|20532252|sp|Q8Z4D5.1|SYA_SALTI RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|25293091|pir||AF0843 alanine-tRNA ligase (EC 6.1.1.7) - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16503904|emb|CAD05933.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi]
 gi|29138720|gb|AAO70289.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. Ty2]
 gi|374354756|gb|AEZ46517.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhi str. P-stx-12]
          Length = 876

 Score =  597 bits (1539), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 355/916 (38%), Positives = 514/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT    +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  + +A+ + TG+     K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIEAVAKVTGSTDLGNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F +ADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  +++V
Sbjct: 283 VIADHIRSCAFLVADGVLPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIEV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    ELK+++A + +++  EE  F +TL +G+    +    +QG  L G+ AF L+DT
Sbjct: 342 MGSAGEELKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + +E++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   +F V + Q YG  + H+G L+ GA    VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGAGFTFAVDDTQKYGQAIGHLGKLSAGA--LKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + P  +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVAQKGSLVSDKVLRFDFSHNEAMKPSEIREVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLDAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A GIRRI AVT   A     A      ++         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGIRRIEAVTGEGAMATVHAQSDRLNDIAHLLKGDSQN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
              K+   L    Q+ K  +++ ++    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LGDKVRAVLERTRQLEKELQQLKDQ--AAAQESANLSSKAVDLNGVKLLVSEL-AGIEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  V+V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTVIVLAT-VVEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|345513425|ref|ZP_08792946.1| alanyl-tRNA synthetase [Bacteroides dorei 5_1_36/D4]
 gi|423228885|ref|ZP_17215291.1| alanyl-tRNA synthetase [Bacteroides dorei CL02T00C15]
 gi|423242281|ref|ZP_17223390.1| alanyl-tRNA synthetase [Bacteroides dorei CL03T12C01]
 gi|423247697|ref|ZP_17228745.1| alanyl-tRNA synthetase [Bacteroides dorei CL02T12C06]
 gi|345456222|gb|EEO47501.2| alanyl-tRNA synthetase [Bacteroides dorei 5_1_36/D4]
 gi|392631590|gb|EIY25561.1| alanyl-tRNA synthetase [Bacteroides dorei CL02T12C06]
 gi|392635624|gb|EIY29523.1| alanyl-tRNA synthetase [Bacteroides dorei CL02T00C15]
 gi|392639567|gb|EIY33383.1| alanyl-tRNA synthetase [Bacteroides dorei CL03T12C01]
          Length = 871

 Score =  597 bits (1539), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 332/747 (44%), Positives = 435/747 (58%), Gaps = 61/747 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++RD+F  FFE K H    S+P+V  +DPTL+F NAGMNQ+K I LG        +K 
Sbjct: 3   AKEIRDSFKSFFESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGN-----HPAKY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWE L  V 
Sbjct: 58  KRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAIGWAWEYLVDVL 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           ++    LYAT F G  + GL  DNEA   W +FLP   +L     DNFWEMGDTGPCGPC
Sbjct: 118 KIDPKDLYATVFEGSPEEGLERDNEAASYWEQFLPKDHILNGNKHDNFWEMGDTGPCGPC 177

Query: 240 SEIHYDRTGNRDAA-----SLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + A      LVN D P  IEIWN+VF+QFNR++DGSL+ LPAK +DTG+
Sbjct: 178 SEIHIDSRSEEEKAQIPGNQLVNKDHPQVIEIWNLVFMQFNRKADGSLEGLPAKVIDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF P+  AI +  G        G D  ++ D+A RV+ADHI
Sbjct: 238 GFERLVRTLQGKTSNYDTDVFQPMLKAIAEMAGT-----TYGQD--NQKDIAMRVIADHI 290

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++F+I DG  P N    YV+RRILRRAVRYG   L  +  F   L+ ++++ MG+ +P
Sbjct: 291 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLIENMGEAYP 350

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG---KVLSGQDAFILWDTYGF 471
           EL  ++  I ++I  EE SF +TL  GI    K   D +    K +SG DAF L+DT+GF
Sbjct: 351 ELNAQKILIEKVIKEEEESFLRTLETGIRLLDKTMNDAKAAGKKEISGVDAFTLYDTFGF 410

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E G+ V+ E FN  M + +ER+R+A   + G  I +    T   H  G  
Sbjct: 411 PLDLTELILRENGMTVNEEEFNAEMQKQKERARNAAAVETGDWITIKEGDT---HFVGYD 467

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            T+     + ++  K   + +Y                IVL+ + FYAE GGQ+ D G I
Sbjct: 468 FTEYETSILRYRQIKQKNQTLYQ---------------IVLSDTPFYAESGGQVGDTGVI 512

Query: 592 EGLFGSFYVRNVQIYGGFVIHIG-SLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHM 650
              F +  + + +      IHI   L E      +   ++  VD ++R   A NH+CTH+
Sbjct: 513 VSEFETIEIIDTKKENNLPIHITKKLPE-----HLDVPMMACVDTEKRAACAANHSCTHL 567

Query: 651 LNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSK 710
           L+ ALR+VLG HV+QKGS+V PE LRFDFSH + V  E LR +E +VN +I+  + +   
Sbjct: 568 LDEALRQVLGTHVEQKGSLVTPESLRFDFSHFQKVTDEQLREVEHLVNAKIRENIPLTEY 627

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
                E     G  A+FGE Y D VRVV  G                  S E CGGTH+S
Sbjct: 628 RNLPIEKAKELGAIALFGEKYGDEVRVVQFGN-----------------SIEFCGGTHVS 670

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVT 797
            T +     ++SE  +A G+RRI A+T
Sbjct: 671 ATGKIGMVRIISESSVAAGVRRIEAIT 697


>gi|204928130|ref|ZP_03219330.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|204322452|gb|EDZ07649.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
          Length = 876

 Score =  597 bits (1539), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 355/916 (38%), Positives = 515/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT    +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGEHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  + +A+ + TGA     K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIEAVAKVTGATDLGNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F +ADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  +++V
Sbjct: 283 VIADHIRSCAFLVADGVLPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIEV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    ELK+++A + +++  EE  F +TL +G+    +    +QG  L G+ AF L+DT
Sbjct: 342 MGSAGEELKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + +E++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVEAINAGQEAVVVLDRTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   +F V + Q YG  + H+G L+ GA    VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGAGFTFAVDDTQKYGQAIGHLGKLSAGA--LKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + P  +R++E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVAQKGSLVSDKVLRFDFSHNEAMKPSEIRQVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  A+   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLDAARA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A GIRRI AVT   A     A      ++         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGIRRIEAVTGEGAMATVHAQSDRLNDIAHLLKGDSQN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
              K+   L    Q+ K  +++ ++    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LGDKVRAVLERTRQLEKELQQLKDQ--AAAQESANLSSKAVDLNGVKLLVSEL-AGIEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  V+V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTVIVLAT-VVEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|146312813|ref|YP_001177887.1| alanyl-tRNA synthetase [Enterobacter sp. 638]
 gi|205830088|sp|A4WDQ6.1|SYA_ENT38 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|145319689|gb|ABP61836.1| alanyl-tRNA synthetase [Enterobacter sp. 638]
          Length = 875

 Score =  597 bits (1539), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 358/915 (39%), Positives = 518/915 (56%), Gaps = 89/915 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT    +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQYAWELLTGENWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 NLPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR+ DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGTAEEDGDRYIEIWNIVFMQFNRQIDGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  ++ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFSTLIKSVAEVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A+D FF  LV  +V V
Sbjct: 283 VIADHIRSCAFLIADGVIPSNENRGYVLRRIIRRAVRHGN-MLGAKDTFFYKLVGPLVGV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MGD   ELK++++ + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGDAGEELKRQQSQVEQVLKTEEEQFARTLERGLALLDEELSQLTGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R +            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQ--DHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
            ++  D + +F  +   +  + + A++   + ++S+  G +  +VL  + FYAE GGQ+ 
Sbjct: 449 -MIRVDSASEFQGYDRLELNAKVTALFVDGKAVDSISAGQDAVVVLDKTPFYAESGGQVG 507

Query: 587 DEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
           D+G ++G   SF V + Q YG  + HIG L  G+    VGE V  +VD  RR+ I  NH+
Sbjct: 508 DKGELKGNGFSFAVSDTQKYGQAIGHIGKLASGS--LKVGEGVQAEVDEARRERIRLNHS 565

Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD 706
            TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + P  +R +E +VN QI+  L 
Sbjct: 566 ATHLMHAALRDVLGTHVAQKGSLVNDKILRFDFSHFEAMKPSEIRAVEDMVNAQIRRNLP 625

Query: 707 VFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGG 766
           + +    L  A+   G  A+FGE Y + VRV+++G                  S ELCGG
Sbjct: 626 IETNIMDLEAARA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCGG 668

Query: 767 THLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEA--------ACSLEKEVDDA 818
           TH S T +   F +LSE G A G+RRI AVT   A  +  A        A  L+ +  + 
Sbjct: 669 THASRTGDIGLFRILSESGTAAGVRRIEAVTGEGAIASLHAESDQLHDIAQLLKGDSHNL 728

Query: 819 SKIEGSLLEKNQVRKAQKKVAEENLQKAVK-VATETAEAAASNGKPFCISRVEVGLDAAA 877
            +   S LE++  R+ +K++ +   Q AV+  A  +++A    G    +S +  G++   
Sbjct: 729 GEKVRSALERS--RQLEKELQQLKEQAAVQESANLSSKAVDIKGVKLLVSEL-AGVEPKM 785

Query: 878 VREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGR 937
           +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G+
Sbjct: 786 LRTMVDDLKNQLGSTIIVLAT-AVDGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGGK 842

Query: 938 CGKGKGGLASGQGTD 952
            G G+  +A   GTD
Sbjct: 843 GG-GRPDMAQAGGTD 856


>gi|443715688|gb|ELU07551.1| hypothetical protein CAPTEDRAFT_94502 [Capitella teleta]
          Length = 773

 Score =  597 bits (1539), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 328/754 (43%), Positives = 449/754 (59%), Gaps = 21/754 (2%)

Query: 54  QVVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPN 113
           Q     + K+R  F  FF   +HV   SS VVP  D    F NAGMNQ+KPIFLGT +P 
Sbjct: 8   QCRRLSSKKIRSQFLDFFRSHDHVFVPSSSVVPSKDDGSYFVNAGMNQFKPIFLGTTEPG 67

Query: 114 TQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWE 173
           + +++L RA N+QKCIR GGKHNDL DVG+D  HHTFFEMLG+WSFGDYFK EA   AW+
Sbjct: 68  SDMAQLKRAVNSQKCIRVGGKHNDLKDVGRDLTHHTFFEMLGSWSFGDYFKREACVMAWQ 127

Query: 174 LLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASRVLPFGCKDNFWEMGD 232
           LLT+VY++PAD+L  TYFGG+ + GL PD E R+IWL   +P +RV P G KDNFW+MGD
Sbjct: 128 LLTEVYKIPADQLLVTYFGGNTELGLEPDEECREIWLSIGVPGNRVFPLGMKDNFWDMGD 187

Query: 233 TGPCGPCSEIHYDRTGNRDAASL---VNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKH 289
            GPCGPC+EIH +R G   +A+L   +   DP   E+WN+VF+QFNRE DGSL+ LPA H
Sbjct: 188 CGPCGPCTEIHLNR-GLDASANLHERLMAGDPGITELWNLVFMQFNRELDGSLRALPACH 246

Query: 290 VDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRV 349
           VDTG+G ERL ++LQ   SNYDTD+F PIF+ IQQ     PY G  G+DD   +D AYR+
Sbjct: 247 VDTGMGLERLAAVLQGVSSNYDTDLFRPIFEVIQQVCDCPPYGGATGSDDKHSIDTAYRI 306

Query: 350 VADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVM 409
           +ADH R L+ A+ DG  PG +G +  +R I+ RA  +G   L A  G    LV +VV  +
Sbjct: 307 IADHSRMLTVAMGDGLVPGRKGLDARVRHIMYRAFMHGF-ALNAPRGLLADLVPVVVDSL 365

Query: 410 GDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKA--AQDVQGKVLSGQDAFILWD 467
           G+ FPEL      ++++I   E  + + + +  +  KKA  A  V  ++ + +   I+  
Sbjct: 366 GEAFPELVAVPHQMQDVIITTEQRYSEQMKETEKSMKKALKASSVPHQLSTQEAERIVKG 425

Query: 468 TYGFPL--DLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAAL 525
            YG     DL  L AE  G+  D++ F+N   +   RS ++    A     ++      L
Sbjct: 426 FYGSTTNADLLSLCAESMGVQFDVDAFHNHGLQQVRRSPTSVRSLAKERPALNQYEVEYL 485

Query: 526 HKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            +RGV  TDD+FK+  F     ++       +F E    G  VG++L  S+FY+E GGQ+
Sbjct: 486 LQRGVPPTDDTFKYSTFNSDHPILNC---DGKFAECGKEGEVVGVILDRSAFYSEGGGQV 542

Query: 586 FDEGFIEGLFGS-FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
            D+G +  + G    V +VQ  G FV+H   L  G+   SVGE VI  +D D R   A N
Sbjct: 543 ADQGEMTTVQGCRMQVLDVQKTGVFVLHTCRLLRGS--LSVGESVIMHIDQDLRHKSACN 600

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKP-VDPEHLRRIESIVNEQIKA 703
           HT TH+LNFALR+VL   V Q GS V PE+L F+F   K  +  + + RI   VN+ I A
Sbjct: 601 HTATHLLNFALRKVLDCDVWQAGSSVNPERLVFEFRSLKTQISADEIERISDEVNKCINA 660

Query: 704 ELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAEL 763
             +V+     L + +    L  +  EVYP+ V V+++GR + DL AD  ++ +   S EL
Sbjct: 661 HSEVYRSTVALRDIEAHPHLVKLDQEVYPNQVAVISVGRPL-DLNADESSERY---SLEL 716

Query: 764 CGGTHLSNTREAEAFALLSEEGIAKGIRRITAVT 797
           CGGTH+ NT +   F +    G  +G +++TA+T
Sbjct: 717 CGGTHVQNTADIGGFVISYFHGSGQGTKKVTALT 750


>gi|443472090|ref|ZP_21062120.1| Alanyl-tRNA synthetase [Pseudomonas pseudoalcaligenes KF707]
 gi|442902390|gb|ELS27949.1| Alanyl-tRNA synthetase [Pseudomonas pseudoalcaligenes KF707]
          Length = 874

 Score =  597 bits (1539), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 367/891 (41%), Positives = 513/891 (57%), Gaps = 85/891 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F  FFE+K H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLSFFEEKGHTRVASSSLIPGNDPTLLFTNAGMNQFKDCFLGL-----EKRAY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           TRA  +QKC+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT  K
Sbjct: 58  TRATTSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWEFLTGDK 117

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFW 228
             +LP ++L+ T +        A D+EA DIW K   +P +R++  G         DNFW
Sbjct: 118 WLKLPKEKLWVTVY--------ASDDEAYDIWTKEVGVPEARMVRIGDNKGAPYASDNFW 169

Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
            MGDTGPCGPC+EI +D   +           D    IEIWN VF+QFNR +DG + PLP
Sbjct: 170 AMGDTGPCGPCTEIFFDHGPDIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVMHPLP 229

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
           A  VDTG+G ER++++LQ+  SNY+ D+F  +  A  +A G          DDA  +   
Sbjct: 230 APSVDTGMGLERISAVLQHVHSNYEIDLFQNLLKAAAEAIGC-------ANDDAPSL--- 279

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            +VVADHIR+ SF IADG  P NEGR YVLRRI+RRA R+G++ L A+  FF+ +V  +V
Sbjct: 280 -KVVADHIRSCSFLIADGVLPSNEGRGYVLRRIVRRACRHGNK-LGAKGTFFHKIVAALV 337

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
             MG  +PELKQ++AHI  ++  EE  F KTL +G++  ++    ++G+V+ G   F L+
Sbjct: 338 AEMGVAYPELKQQQAHIERVLKTEEEQFAKTLEQGLKILEQDLASLEGRVIPGDIVFKLY 397

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFP+DLT  +A ER L VD EGF   M+  RER+R      A  A  MD +A     
Sbjct: 398 DTYGFPVDLTADIARERELTVDEEGFEREMEAQRERAR------ASSAFGMDYNALVK-- 449

Query: 527 KRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
              V A  D   ++       VI A++   + +E +  G E  +VL  + FYAE GGQI 
Sbjct: 450 ---VDADTDFTGYVCTSGEGKVI-ALFKDGQAVEQLGEGEEGVLVLDRTPFYAESGGQIG 505

Query: 587 DEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
           D GFI      F VR+    GG  +H G +  G+ R  +G  V  +VD   R+  A NH+
Sbjct: 506 DCGFIAAQGLRFDVRDTTKAGGAFLHHGVVDHGSLR--IGASVTAQVDASVRQATALNHS 563

Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD 706
            TH+L+ ALR VLGDHV QKGS+V  ++LRFDFSH + + PE L+ +E IVN +I+   +
Sbjct: 564 ATHLLHAALRRVLGDHVQQKGSLVDSQRLRFDFSHFEAIKPEQLKALEDIVNTEIRKNSE 623

Query: 707 VFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGG 766
           V ++E  +  AK   G  A+FGE Y + VRV+++G                  S ELCGG
Sbjct: 624 VETEETDIETAKA-KGATALFGEKYGEQVRVLSMGG---------------DFSVELCGG 667

Query: 767 THLSNTREAEAFALLSEEGIAKGIRRITAVT--TGLAY------KAFEAACSLEKEVDDA 818
           TH+S T +   F + SE G+A G+RRI AVT    LAY      +  EAA  ++   D+ 
Sbjct: 668 THVSRTGDIGLFKITSEGGVASGVRRIEAVTGAAALAYLNGAEEQLKEAAVLVKGSRDNL 727

Query: 819 SKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASN--GKPFCISRVEVGLDAA 876
                +LLE+N  R+ +K+V ++   KA   A +   A+A++  G     +R++ GLD  
Sbjct: 728 LDKLSALLERN--RQLEKEV-DQLKAKAASAAGDDLAASATDVKGVKVLAARLD-GLDGD 783

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWL 927
           A+   V ++  + G  V++  +     K  + AGV +  D + QL+  + +
Sbjct: 784 ALLALVDQLKNKLGRAVILLGS-ALEGKVTLVAGVTQ--DLTGQLKAGDLM 831


>gi|321496436|gb|EAQ38546.2| Alanyl-tRNA synthetase [Dokdonia donghaensis MED134]
          Length = 870

 Score =  597 bits (1539), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 364/880 (41%), Positives = 492/880 (55%), Gaps = 76/880 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + +VR  F +FF+ KNH    S+P+V  +DPTL+F NAGM  +K  FLG A P     K 
Sbjct: 3   SQEVRKQFLEFFKSKNHSIVASAPMVLKDDPTLMFTNAGMVPFKEYFLGNATP-----KN 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +R  +TQKC+R  GKHNDL++VGKDTYHHT FEMLGNWSFGDYFK EAI WAWE LT+V 
Sbjct: 58  SRLTDTQKCLRVSGKHNDLEEVGKDTYHHTMFEMLGNWSFGDYFKEEAIAWAWEFLTEVV 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           ++  D +Y + F GDE  GL  D EA DIW K +  SR++    KDNFWEMG  GPCGPC
Sbjct: 118 KVDKDSIYVSIFEGDESEGLERDQEAYDIWTKHIDESRIINGNKKDNFWEMGAQGPCGPC 177

Query: 240 SEIHYD-RTGNRDAA----SLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D R+    AA    SLVN D P  IEIWN+VF+Q+NR ++GSL  LP +HVDTG+
Sbjct: 178 SEIHVDIRSAEEKAAVDGKSLVNMDHPLVIEIWNLVFMQYNRLANGSLTKLPNQHVDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL  +LQ   SNYDTDVF P+   ++  T     S K G  + ++ D+A RV+ADH+
Sbjct: 238 GFERLCMVLQGVQSNYDTDVFTPLMREVETIT-----SSKCG--ETEETDIAVRVIADHV 290

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R +SF+IADG  P N G  YV+RRILRRA+RYG   L  ++ F   LV+ +V  MGD FP
Sbjct: 291 RAVSFSIADGQLPSNTGAGYVIRRILRRAIRYGFTFLDTKEPFIYKLVSTLVNQMGDAFP 350

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLD 474
           EL+ ++  I  +I  EEASF +TL KG+        +  G  +SG  AF L+DTYGFP+D
Sbjct: 351 ELEAQKNLITNVIREEEASFLRTLDKGLILLDNVIANTSGDTVSGDKAFELYDTYGFPID 410

Query: 475 LTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATD 534
           LT L+  E+ L +D  GF  A+ E ++RSR+A   +                   +L  D
Sbjct: 411 LTALILSEKNLKLDEAGFEAALKEQKDRSRAATKVET--------------DDWNILQED 456

Query: 535 DSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGL 594
              +FI +   ++ IK   T     ES   G    +V   + FY E GGQ+ D+G++E  
Sbjct: 457 SEEEFIGYDTLEASIK--ITRYRKTESKKDGELYQLVFNLTPFYPEGGGQVGDKGYLETP 514

Query: 595 FGS-FYVRNVQIYGGFVIHIGS----LTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
            G   Y+ + +     +IH+       TEG  +          VD  +R   A NHT TH
Sbjct: 515 SGEVVYIIDTKKENNLIIHLAKNLPRSTEGTFK--------AVVDVKQRSRTAANHTATH 566

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +L+  LR++LG HV+QKGS+V    LRFDFSH   V  E L+ +E  VN +I+  L +  
Sbjct: 567 LLHQGLRKILGTHVEQKGSMVHSRNLRFDFSHFSKVTSEELKEVEDFVNARIRENLSLEE 626

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
           +     +     G  A+FGE Y D VR +  G+                 S ELCGGTH+
Sbjct: 627 QRGIPYDQAIQEGAIALFGEKYGDAVRTIRFGK-----------------SMELCGGTHV 669

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV-------DDASKIE 822
            NT +   F + SE  +A GIRRI A+T+  A   F +      +V        D  K  
Sbjct: 670 KNTGDIWHFKITSEGAVASGIRRIEAITSDAAKDYFTSETEAYNQVKATLKGNQDPVKAI 729

Query: 823 GSLLEKNQVRKAQKKVAEENLQKAVKVATETA-EAAASNGKPFCISRVEVGLDAAAVREA 881
            SLL++N   K  K+V     +KA  ++ + A E    +G  F   +V+  LDA A++  
Sbjct: 730 TSLLDENAALK--KQVEALIKEKAQNLSGDLAKEFEDIDGVDFLAKKVD--LDAGAIKNL 785

Query: 882 VLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQL 921
             K+ E K    ++F T E   KA++   + ++   SK L
Sbjct: 786 AFKLGENKDNVFLLFGT-EQNGKALLSCYISKELVASKNL 824


>gi|294778219|ref|ZP_06743645.1| alanine--tRNA ligase [Bacteroides vulgatus PC510]
 gi|294447847|gb|EFG16421.1| alanine--tRNA ligase [Bacteroides vulgatus PC510]
          Length = 872

 Score =  597 bits (1539), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 332/747 (44%), Positives = 434/747 (58%), Gaps = 61/747 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++RD+F  FFE K H    S+P+V  +DPTL+F NAGMNQ+K I LG        +K 
Sbjct: 4   AKEIRDSFKSFFESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGN-----HPAKY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWE L  V 
Sbjct: 59  KRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAIGWAWEYLVDVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           ++    LYAT F G  + GL  DNEA   W +FLP   +L     DNFWEMGDTGPCGPC
Sbjct: 119 KIDPKDLYATVFEGSPEEGLERDNEAASYWEQFLPKDHILNGNKHDNFWEMGDTGPCGPC 178

Query: 240 SEIHYDRTGNRDAA-----SLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + A      LVN D P  IEIWN+VF+QFNR++DGSL+ LPAK +DTG+
Sbjct: 179 SEIHIDSRSEEEKAQIPGNQLVNKDHPQVIEIWNLVFMQFNRKADGSLEGLPAKVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF PI  AI +  G        G D  ++ D+A RV+ADHI
Sbjct: 239 GFERLVRTLQGKTSNYDTDVFQPILKAIAEMAGT-----TYGQD--NQKDIAMRVIADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++F+I DG  P N    YV+RRILRRAVRYG   L  +  F   L+ ++++ MG+ +P
Sbjct: 292 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLIENMGEAYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG---KVLSGQDAFILWDTYGF 471
           EL  ++  I ++I  EE SF +TL  GI    K   D +    K +SG DAF L+DT+GF
Sbjct: 352 ELNAQKTLIEKVIKEEEESFLRTLETGIRLLDKTMNDAKAAGKKEISGVDAFTLYDTFGF 411

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E G+ V+ E FN  M + +ER+R+A   + G  I +    T   H  G  
Sbjct: 412 PLDLTELILRENGMTVNEEEFNAEMQKQKERARNAAAVETGDWITIKEGDT---HFVGYD 468

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            T+     + ++  K   + +Y                IVL+ + FYAE GGQ+ D G I
Sbjct: 469 FTEYETSILRYRQIKQKNQTLYQ---------------IVLSDTPFYAESGGQVGDTGVI 513

Query: 592 EGLFGSFYVRNVQIYGGFVIHI-GSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHM 650
              F +  + + +      IHI   L E      +   ++  VD ++R   A NH+CTH+
Sbjct: 514 VSEFETIEIIDTKKENNLPIHITKKLPE-----HLDVPMMACVDTEKRAACAANHSCTHL 568

Query: 651 LNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSK 710
           L+ ALR+VLG HV+QKGS+V PE LRFDFSH + V  E LR +E +VN +I+  + +   
Sbjct: 569 LDEALRQVLGTHVEQKGSLVTPESLRFDFSHFQKVTDEQLREVEHLVNAKIRENIPLTEY 628

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
                E     G  A+FGE Y D VRVV  G                  S E CGGTH+ 
Sbjct: 629 RNLPIEKAKELGAIALFGEKYGDEVRVVQFGN-----------------SIEFCGGTHVP 671

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVT 797
            T +     ++SE  +A G+RRI A+T
Sbjct: 672 ATGKIGMVRIISESSVAAGVRRIEAIT 698


>gi|395651289|ref|ZP_10439139.1| alanyl-tRNA ligase [Pseudomonas extremaustralis 14-3 substr. 14-3b]
          Length = 872

 Score =  597 bits (1539), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 358/892 (40%), Positives = 508/892 (56%), Gaps = 89/892 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F +FFE++ H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLRFFEEQGHTRVASSSLIPGNDPTLLFTNAGMNQFKDCFLGQ-----EKRAY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           TRA ++QKC+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AW  LT V 
Sbjct: 58  TRAVSSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAINFAWTFLTGVL 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFWEM 230
           +LP ++L+ T +        A D+EA DIW + +  P  R++  G         DNFW M
Sbjct: 118 KLPKEKLWVTVY--------ASDDEAYDIWTQQIGVPPERMVRIGDNKGAPYASDNFWTM 169

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG L PLPA 
Sbjct: 170 GDTGPCGPCTEIFYDHGADIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLPAP 229

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+++++Q+  SNY+ D+F  +  A  +A G       V  D A     + +
Sbjct: 230 SVDTGMGLERISAVMQHVHSNYEIDLFQSLLAAAAKAIGC------VNDDQA-----SLK 278

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           VVADHIR+  F IADG  P NEGR YVLRRI+RRA R+G++ L A   FF  +V  +V  
Sbjct: 279 VVADHIRSCGFLIADGVLPSNEGRGYVLRRIIRRACRHGNK-LGASGSFFYQIVAALVAE 337

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MGD FPELKQ +AHI  ++ AEE  F KTL +G++  ++   ++QG V+ G   F L+DT
Sbjct: 338 MGDAFPELKQNQAHIERVLKAEEEQFAKTLEQGLKILEQDLANLQGTVVPGDVVFKLYDT 397

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +A ER L +D EGF   MD  R R+RSA       A  MD ++       
Sbjct: 398 YGFPMDLTGDIARERNLTLDEEGFEREMDAQRVRARSAS------AFGMDYNS------- 444

Query: 529 GVLATDDSFKFIWFQDHKSVIKAI--YTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
            ++  D + +F  +       K +  Y   + ++ +  G++  +VL  + FYAE GGQI 
Sbjct: 445 -LVKVDVATEFTGYNATSGAAKVVGLYKDGQSVDVLNEGDDGVVVLDRTPFYAESGGQIG 503

Query: 587 DEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
           D GF++   G F VR+    GG  +H G L  G+   ++G  V  +VD D R+  A NH+
Sbjct: 504 DCGFLKASSGRFDVRDTTKTGGAFLHHGVLASGS--LTIGSPVETQVDADVRRATALNHS 561

Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD 706
            TH+L+ ALR+VLG+HV QKGS+V  ++LRFDFSH + + PE ++ +E IVN Q++    
Sbjct: 562 ATHLLHAALRQVLGEHVQQKGSLVDSQRLRFDFSHFEAIKPEQIKALEDIVNAQVRKNTP 621

Query: 707 VFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGG 766
           V ++E  +  AK   G  A+FGE Y D VRV+++G                  S ELCGG
Sbjct: 622 VETEETDIETAKA-KGAMALFGEKYGDNVRVLSMGG---------------DFSVELCGG 665

Query: 767 THLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAF--------EAACSLEKEVDDA 818
            H + T +     ++SE G+A G+RRI AVT   A            EAA  ++   D+ 
Sbjct: 666 IHANRTGDIGLLKIISEGGVASGVRRIEAVTGAAALAYLNAAEEQLKEAASLVKGSRDNL 725

Query: 819 SKIEGSLLEKNQVRKAQKKVAEENLQ-KAVKVATETAEAAASN--GKPFCISRVEVGLDA 875
                ++LE+N+  + Q     E LQ KA   A +   A+A +  G     +R++ G D 
Sbjct: 726 IDKLSAVLERNRTLEKQL----EQLQAKAASAAGDDLSASAQDVKGVKVLAARLD-GQDG 780

Query: 876 AAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWL 927
            A+   V ++  + G  V++  +    +K V+ AGV +  D + QL+  + +
Sbjct: 781 KALLALVDQLKNKLGRAVILLGSVH-EDKVVLVAGVTK--DLTGQLKAGDLM 829


>gi|168235854|ref|ZP_02660912.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|194737652|ref|YP_002115779.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|194713154|gb|ACF92375.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197290777|gb|EDY30131.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
          Length = 876

 Score =  597 bits (1539), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 356/916 (38%), Positives = 514/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT    +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  + +A+ + TGA     K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIEAVAKVTGATDLGNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F +ADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  +++V
Sbjct: 283 VIADHIRSCAFLVADGVLPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIEV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    ELK+++A + +++  EE  F +TL +G+    +    +QG  L G+ AF L+DT
Sbjct: 342 MGSAGEELKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + +E++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   +F V + Q YG  + HIG L+ GA    VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGAGFTFAVDDTQKYGQAIGHIGKLSAGA--LKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + P  +R++E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVAQKGSLVSDKVLRFDFSHNEAMKPSEIRQVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLDAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A GIRRI AVT   A     A      ++         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGIRRIEAVTGEGAMATVHAQSDRLNDIAHLLKGDSQN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
              K+   L    Q+ K  +++ ++    A + A  +++A   NG    +S +   ++  
Sbjct: 728 LGDKVRAVLERTRQLEKELQQLKDQ--AAAQESANLSSKAVDLNGVKLLVSEL-ASIEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  V+V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTVIVLAT-VVEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|416598023|ref|ZP_11782410.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 366867]
 gi|322677738|gb|EFY73801.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 366867]
          Length = 876

 Score =  597 bits (1538), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 355/916 (38%), Positives = 515/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT    +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  + +A+ + TGA     K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIEAVAKVTGATDLGNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F +ADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  +++V
Sbjct: 283 VIADHIRSCAFLVADGVLPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIEV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    ELK+++A + +++  EE  F +TL +G+    +    +QG  L G+ AF L+DT
Sbjct: 342 MGSAGEELKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + +E++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   +F V + Q YG  + H+G L+ GA    VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGAGFTFAVDDTQKYGQAIGHLGKLSAGA--LKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRF+FSH + + P  +R++E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVAQKGSLVSDKVLRFNFSHNEAMKPSEIRQVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLDAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A GIRRI AVT   A     A      ++         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGIRRIEAVTGEGAMATVHAQSDRLNDIAHLLKGDSQN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
              K+   L    Q+ K  +++ ++    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LGDKVRAVLERTRQLEKELQQLKDQ--AAAQESANLSSKAVDLNGVKLLVSEL-AGIEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  V+V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTVIVLAT-VVEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|395229809|ref|ZP_10408119.1| alanyl-tRNA synthetase [Citrobacter sp. A1]
 gi|424730024|ref|ZP_18158622.1| alanyl-trna synthetase [Citrobacter sp. L17]
 gi|394716484|gb|EJF22222.1| alanyl-tRNA synthetase [Citrobacter sp. A1]
 gi|422895236|gb|EKU35025.1| alanyl-trna synthetase [Citrobacter sp. L17]
          Length = 875

 Score =  597 bits (1538), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 356/913 (38%), Positives = 509/913 (55%), Gaps = 85/913 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT    +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQYAWELLTGENWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAAYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSAEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNY+ D+F  + +++ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYEIDLFRSLIESVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A+D FF  LV  +V V
Sbjct: 283 VIADHIRSCAFLIADGVVPSNENRGYVLRRIIRRAVRHGN-MLGAKDTFFYKLVGPLVDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    ELK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEELKRQQAMVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A +   
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNAMIRVD 453

Query: 529 GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDE 588
           G       FK     +    + A++   + ++++  G +  +VL  + FYAE GGQ+ D+
Sbjct: 454 GA----SEFKGYEHLELNGKVTALFVDGKAVDAINAGQDAVVVLDQTPFYAESGGQVGDK 509

Query: 589 GFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
           G ++G   +F V + Q YG  + HIG L+  AG   +G+ V   VD  RR  I  NH+ T
Sbjct: 510 GELKGAGFAFAVSDTQKYGQAIGHIGKLS--AGSLKIGDAVQADVDEARRARIRLNHSAT 567

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+++ ALR+VLG HV QKGS+V  + LRFDFSH + + P  +R +E +VN QI+  L + 
Sbjct: 568 HLMHAALRQVLGTHVAQKGSLVNDKLLRFDFSHTEAMKPAEIRAVEDLVNAQIRRNLPIE 627

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
           +    L  AK   G  A+FGE Y D VRV+++G                  S ELCGGTH
Sbjct: 628 TNIMDLEAAKA-KGAMALFGEKYDDHVRVLSMG----------------DFSTELCGGTH 670

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------DDAS 819
            S T +   F ++SE G A G+RRI AVT   A +   A      +V         + A 
Sbjct: 671 ASRTGDIGLFRIVSESGTAAGVRRIEAVTGEGAIQTVHAESDRLSDVAQLLKGDSQNIAD 730

Query: 820 KIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVR 879
           K+   L    Q+ K  +++ E+    A + A  +++A   NG    +S +   ++   +R
Sbjct: 731 KVRSVLERTRQLEKELQQLKEQ--AAAQESANLSSKAVDINGVKLLVSEL-ADVEPKMLR 787

Query: 880 EAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCG 939
             V  +  Q G  V+V +T     K  + AGV +  D + +++  E +    Q + G+ G
Sbjct: 788 TMVDDLKNQLGSTVIVLAT-VVEGKVSLIAGVSK--DVTDRVKAGELVGMVAQQVGGKGG 844

Query: 940 KGKGGLASGQGTD 952
            G+  +A   GTD
Sbjct: 845 -GRPDMAQAGGTD 856


>gi|332305691|ref|YP_004433542.1| alanyl-tRNA synthetase [Glaciecola sp. 4H-3-7+YE-5]
 gi|410642570|ref|ZP_11353080.1| alanyl-tRNA synthetase [Glaciecola chathamensis S18K6]
 gi|332173020|gb|AEE22274.1| alanyl-tRNA synthetase [Glaciecola sp. 4H-3-7+YE-5]
 gi|410137867|dbj|GAC11267.1| alanyl-tRNA synthetase [Glaciecola chathamensis S18K6]
          Length = 865

 Score =  597 bits (1538), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 364/932 (39%), Positives = 518/932 (55%), Gaps = 95/932 (10%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF DK H    SS +VP +DPTLLF NAGMNQ+K +FLGT     +  K TR
Sbjct: 7   QIRQAFLNFFADKGHQKVSSSSLVPSDDPTLLFTNAGMNQFKDVFLGT-----EQRKYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A ++Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AW  LT+  +L
Sbjct: 62  ATSSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQQAIAYAWTFLTQELKL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFGCKDNFWEMGDTGPCGPC 239
           P ++L  T +        + D+EA DIW   +  P  +++     DNFW MGDTGPCGPC
Sbjct: 122 PKEKLLVTIY--------SEDDEAFDIWHNEIGVPKEKIIRIATSDNFWSMGDTGPCGPC 173

Query: 240 SEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFE 297
           SEI YD   +           D    IEIWN+VF+QFNR+++G + PLP   +DTG+G E
Sbjct: 174 SEIFYDHGEHIWGGPPGTPEEDGDRFIEIWNLVFMQFNRQANGDMLPLPKPSIDTGMGLE 233

Query: 298 RLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTL 357
           R+++ILQN  SNY+ D+F  +  A  +  G                D + RVVADHIR+ 
Sbjct: 234 RISAILQNVHSNYEIDIFQNLIKATAEIVGTSSLE-----------DKSLRVVADHIRSC 282

Query: 358 SFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELK 417
           SF I+DG  P NEGR YVLRRI+RRAVR+G++ L A+  FF  LV  +   MGD +PEL 
Sbjct: 283 SFLISDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAKGVFFYKLVAALATEMGDAYPELN 341

Query: 418 QREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQ 477
           ++ A I +++  EE  F +TL +G+     A  +++GKV+ G+  F L+DTYGFP DLT 
Sbjct: 342 EQRAVIEKVLRVEEEQFSRTLERGMLILNDALSELEGKVVPGELVFKLYDTYGFPADLTN 401

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSF 537
            +A E+GL +D EGF  AM E R+R++ A N         D D    L       +D   
Sbjct: 402 DVAREKGLSIDEEGFEQAMAEQRKRAQKASN--------FDLDYNEQLR------SDLES 447

Query: 538 KFIWF--QDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLF 595
            F+ +  + + + IK I+   + +  +  G E  I+L  S FYAE GGQ  D G +    
Sbjct: 448 VFVGYELEQNTAQIKEIFVQGQSVAEIAAGMEGTIILDESPFYAEAGGQAGDTGTLVKDS 507

Query: 596 GSFYVRNVQIYGGFVIHIG-SLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFA 654
           G F V++    G  + H G +L+E      VG+ V   V+  RR  I  NH+ TH+++ A
Sbjct: 508 GGFEVQDTVKLGKAIAHKGAALSE----LKVGDSVQANVNGARRHAIKLNHSATHLMHAA 563

Query: 655 LREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATL 714
           L+ VLG+HV+QKGS+V PE+LRFDFSH + +  E +  +E++VNEQI A   + +K   L
Sbjct: 564 LKSVLGEHVNQKGSLVQPERLRFDFSHYEAMTKEQVLAVETMVNEQILANHALQTKLMGL 623

Query: 715 AEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTRE 774
            +AK   G  A+FGE Y D VRVV++G                  S ELCGGTH++ T +
Sbjct: 624 EQAKEA-GAMALFGEKYDDDVRVVSMG----------------DFSMELCGGTHVARTGD 666

Query: 775 AEAFALLSEEGIAKGIRRITAVT--TGLAY---KAFE-AACSLEKEVDDASKIEGSLLEK 828
              F ++SE GIA G+RRI AVT  T L Y   +AFE  + S   + D  +  E  L   
Sbjct: 667 IGLFKIISESGIASGVRRIEAVTGITALQYVQQQAFELTSISAVLKTDVTTVGERVLQLI 726

Query: 829 NQVRKAQKKVAEENLQKAVKVATETAEAAAS---------NGKPFCISRVEVGLDAAAVR 879
            Q +  +K+V         K+  E A +A S         NG       V+ G+++ A+R
Sbjct: 727 EQTKTLEKEV--------TKLKQEIANSAGSDLLSQINEINGVKVLSYHVQ-GIESGALR 777

Query: 880 EAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCG 939
             +  +  Q G  V++     T  K  + AGV +  D +++++  E +    Q + G+ G
Sbjct: 778 TMIDDLKNQIGSGVILLGV-ATGEKVSLIAGVTK--DLTQKVKAGELVNFVAQQVGGKGG 834

Query: 940 KGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
            G+  +A   G+    +  A+    E+   +L
Sbjct: 835 -GRPDMAQAGGSQPENLDSAIASVNEWLQERL 865


>gi|150004460|ref|YP_001299204.1| alanyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
 gi|423312541|ref|ZP_17290478.1| alanyl-tRNA synthetase [Bacteroides vulgatus CL09T03C04]
 gi|205829986|sp|A6L1L8.1|SYA_BACV8 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|149932884|gb|ABR39582.1| alanyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
 gi|392688229|gb|EIY81518.1| alanyl-tRNA synthetase [Bacteroides vulgatus CL09T03C04]
          Length = 871

 Score =  597 bits (1538), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 332/747 (44%), Positives = 434/747 (58%), Gaps = 61/747 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++RD+F  FFE K H    S+P+V  +DPTL+F NAGMNQ+K I LG        +K 
Sbjct: 3   AKEIRDSFKSFFESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGN-----HPAKY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWE L  V 
Sbjct: 58  KRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAIGWAWEYLVDVL 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           ++    LYAT F G  + GL  DNEA   W +FLP   +L     DNFWEMGDTGPCGPC
Sbjct: 118 KIDPKDLYATVFEGSPEEGLERDNEAASYWEQFLPKDHILNGNKHDNFWEMGDTGPCGPC 177

Query: 240 SEIHYDRTGNRDAA-----SLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + A      LVN D P  IEIWN+VF+QFNR++DGSL+ LPAK +DTG+
Sbjct: 178 SEIHIDSRSEEEKAQIPGNQLVNKDHPQVIEIWNLVFMQFNRKADGSLEGLPAKVIDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF PI  AI +  G        G D  ++ D+A RV+ADHI
Sbjct: 238 GFERLVRTLQGKTSNYDTDVFQPILKAIAEMAGT-----TYGQD--NQKDIAMRVIADHI 290

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++F+I DG  P N    YV+RRILRRAVRYG   L  +  F   L+ ++++ MG+ +P
Sbjct: 291 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLIENMGEAYP 350

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG---KVLSGQDAFILWDTYGF 471
           EL  ++  I ++I  EE SF +TL  GI    K   D +    K +SG DAF L+DT+GF
Sbjct: 351 ELNAQKTLIEKVIKEEEESFLRTLETGIRLLDKTMNDAKAAGKKEISGVDAFTLYDTFGF 410

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E G+ V+ E FN  M + +ER+R+A   + G  I +    T   H  G  
Sbjct: 411 PLDLTELILRENGMTVNEEEFNAEMQKQKERARNAAAVETGDWITIKEGDT---HFVGYD 467

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            T+     + ++  K   + +Y                IVL+ + FYAE GGQ+ D G I
Sbjct: 468 FTEYETSILRYRQIKQKNQTLYQ---------------IVLSDTPFYAESGGQVGDTGVI 512

Query: 592 EGLFGSFYVRNVQIYGGFVIHIG-SLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHM 650
              F +  + + +      IHI   L E      +   ++  VD ++R   A NH+CTH+
Sbjct: 513 VSEFETIEIIDTKKENNLPIHITKKLPE-----HLDVPMMACVDTEKRAACAANHSCTHL 567

Query: 651 LNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSK 710
           L+ ALR+VLG HV+QKGS+V PE LRFDFSH + V  E LR +E +VN +I+  + +   
Sbjct: 568 LDEALRQVLGTHVEQKGSLVTPESLRFDFSHFQKVTDEQLREVEHLVNAKIRENIPLTEY 627

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
                E     G  A+FGE Y D VRVV  G                  S E CGGTH+ 
Sbjct: 628 RNLPIEKAKELGAIALFGEKYGDEVRVVQFGN-----------------SIEFCGGTHVP 670

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVT 797
            T +     ++SE  +A G+RRI A+T
Sbjct: 671 ATGKIGMVRIISESSVAAGVRRIEAIT 697


>gi|300718056|ref|YP_003742859.1| alanyl-tRNA synthetase [Erwinia billingiae Eb661]
 gi|299063892|emb|CAX61012.1| Alanyl-tRNA synthetase [Erwinia billingiae Eb661]
          Length = 875

 Score =  597 bits (1538), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 361/930 (38%), Positives = 518/930 (55%), Gaps = 81/930 (8%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF+ K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFQSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGQDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK EAI +AWELLT  + +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIGFAWELLTGAQWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP ++L+ T +          D+EA DIW K   +P  R++  G         DNFW+M
Sbjct: 122 NLPKEKLWVTVY--------ETDDEAFDIWEKEVGVPRERIIRIGDNKGGAYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPCSEI +D   +           D    IEIWNIVF+QFNR+ DG++ PLP  
Sbjct: 174 GDTGPCGPCSEIFFDHGDHIWGGPPGSPEEDGDRFIEIWNIVFMQFNRQPDGTMLPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+T++LQ+  SNY+ D+F  +  ++ + TGA   + K           + R
Sbjct: 234 SVDTGMGLERITAVLQHVNSNYEIDLFARLIASVAEVTGATDLTSK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L AQ  FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVIPSNENRGYVLRRIIRRAVRHGN-MLGAQGSFFWKLVGPLISV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    EL  +++ + +I+  EE  F KTL +G+    +  + +QG  L G+  F L+DT
Sbjct: 342 MGSAGEELASQQSQVEQILKTEEEQFAKTLERGLALLDEELEKLQGDTLDGETVFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           +GFP DLT  +  ER L +D  GF  AM++ R+R+R A    A  + V+  DA +A    
Sbjct: 402 FGFPADLTADVCRERNLKIDEAGFEKAMEQQRQRAREASGFGADYSKVIQIDAASA---- 457

Query: 529 GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDE 588
                   FK     +  S + AI+   +    +V G E  IVL  + FY E GGQ+ D 
Sbjct: 458 --------FKGYEQLELNSTVTAIFVDGKPATEIVAGQEGVIVLDETPFYGESGGQVGDT 509

Query: 589 GFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
           G ++    +F V + Q YG  + H G+L   AG+  +G+ +  +VD  RR  I  NH+ T
Sbjct: 510 GELKSDAATFTVNDTQKYGQAIGHTGTLA--AGQIRIGDRLSAQVDQARRDRIRLNHSAT 567

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+L+ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R++E IVN Q++  L + 
Sbjct: 568 HLLHAALRQVLGHHVAQKGSLVNDKYLRFDFSHFEAMKPEEIRQVEEIVNAQVRRNLAIE 627

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
           +    L  AK  +G  A+FGE Y D VRV+++G                  S ELCGGTH
Sbjct: 628 TNIMELEAAKS-HGAMALFGEKYDDHVRVLSMG----------------DFSTELCGGTH 670

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEK 828
            S T +   F +LSE G A G+RRI AVT   A     A     +E+    K   S L +
Sbjct: 671 ASRTGDIGLFRILSESGTAAGVRRIEAVTGEGALGLMYAQSEQLQEIAHLIKANNSNLNE 730

Query: 829 ------NQVRKAQKKVAE-ENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREA 881
                 + VR  ++++ + ++ Q A + A+ +++A    G    +S +   ++   +R  
Sbjct: 731 KVRAMIDHVRGLERELQQLKDQQAAQESASLSSKAIEIKGTRLLVSELS-NVEPKMLRTM 789

Query: 882 VLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKG 941
           V ++  Q    ++V +T     K  + AGV +  D + +++  E +    Q + G+ G G
Sbjct: 790 VDELKNQLKSAIIVLAT-VADGKVSLIAGVTK--DLTDRVKAGELVGELAQQVGGKGG-G 845

Query: 942 KGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           +  +A   GTDA  +  A+     + A KL
Sbjct: 846 RPDMAQAGGTDAQALPAALAGVESWVAAKL 875


>gi|218129222|ref|ZP_03458026.1| hypothetical protein BACEGG_00798 [Bacteroides eggerthii DSM 20697]
 gi|217988600|gb|EEC54920.1| alanine--tRNA ligase [Bacteroides eggerthii DSM 20697]
          Length = 873

 Score =  597 bits (1538), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 331/747 (44%), Positives = 436/747 (58%), Gaps = 61/747 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++RD+F  FFE K H    S+P+V  +DPTL+F NAGMNQ+K I LG        +K 
Sbjct: 4   ANEIRDSFKSFFESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGN-----HPAKY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWE L  V 
Sbjct: 59  KRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAWEYLVDVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +L    LYAT F G  + GL  DNEA   W +FLP   +L     DNFWEMGDTGPCGPC
Sbjct: 119 KLDPKDLYATVFEGSPEEGLERDNEAASYWEQFLPKDHILNGNKHDNFWEMGDTGPCGPC 178

Query: 240 SEIHYDRTGNRDAA-----SLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + A      LVN D P  IEIWN+VF+QFNR++DGSL+ LPAK +DTG+
Sbjct: 179 SEIHVDSRSEEEKAKVPGSQLVNKDHPQVIEIWNLVFMQFNRKADGSLEGLPAKVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF PI  AI    G        G +  ++ D+A RV+ADHI
Sbjct: 239 GFERLVRTLQGKTSNYDTDVFQPILKAIGDMAGT-----TYGVN--EQQDIAMRVIADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++F+I DG  P N    YV+RRILRRAVRYG   L  +  F   L+ ++++ MG  +P
Sbjct: 292 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLIENMGGAYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ--GKV-LSGQDAFILWDTYGF 471
           EL  ++  I ++I  EE SF +TL  GI    K   D +  GK  +SG+DAF L+DT+GF
Sbjct: 352 ELNVQKELIAKVIKEEEDSFLRTLETGIRLLDKTMADAKAAGKTEISGKDAFTLYDTFGF 411

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E  +  DI+ F+  M + ++R+R+A   + G  I +    T  +   G  
Sbjct: 412 PLDLTELILRENDMTADIKEFDAEMQQQKQRARNAAAVETGDWITLQEGTTEFV---GYD 468

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            T+     + ++  K   + +Y                IVL  + FYAE GGQ+ D G +
Sbjct: 469 YTEYETSILRYRQIKQKNQTLYQ---------------IVLDKTPFYAESGGQVGDTGVL 513

Query: 592 EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHML 651
              F +  V + +      IHI   T+          + C VD D+R   A NH+ TH+L
Sbjct: 514 VNEFETIEVIDTKKENNLPIHI---TKKLPEHLEAPMMAC-VDTDKRAACAANHSATHLL 569

Query: 652 NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS-K 710
           + ALREVLGDHV+QKGS+V  + LRFDFSH + V  E +R++E IVN +I+A + +   +
Sbjct: 570 DAALREVLGDHVEQKGSLVNSDSLRFDFSHFQKVTDEEIRQVEHIVNAKIRANIPLKEYR 629

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
              + EAK + G  A+FGE Y D VRV+  G                  S E CGGTH++
Sbjct: 630 NIPIEEAKEL-GAIALFGEKYGDHVRVIQFGS-----------------SIEFCGGTHVA 671

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVT 797
            T       ++SE  +A G+RRI A T
Sbjct: 672 ATGNIGMMKIVSESSVAAGVRRIEAYT 698


>gi|423132216|ref|ZP_17119866.1| alanyl-tRNA synthetase [Myroides odoratimimus CCUG 12901]
 gi|371639985|gb|EHO05594.1| alanyl-tRNA synthetase [Myroides odoratimimus CCUG 12901]
          Length = 875

 Score =  597 bits (1538), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 346/834 (41%), Positives = 481/834 (57%), Gaps = 60/834 (7%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R  F  FFE++ H+   S+P+V  +DPTL+F N+GM Q+K  FLG A P     K 
Sbjct: 3   SQEIRQKFLNFFEERGHMVVPSAPIVLKDDPTLMFNNSGMAQFKEYFLGNAKP-----KS 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  +TQKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWELLT+VY
Sbjct: 58  NRITDTQKCLRVSGKHNDLEEVGIDTYHHTMFEMLGNWSFGDYFKKEAINWAWELLTEVY 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           ++P D LY T F G E+  +  D EA DIW   +   R+L    KDNFWEMGD GPCGPC
Sbjct: 118 KIPKDILYVTVFEGSEEENVPFDQEAYDIWSTLIDKDRILMGNKKDNFWEMGDQGPCGPC 177

Query: 240 SEIHYDRTGNRDAA-----SLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           +EIH D     + A      LVN D P  +EIWN VF++FNR++DGSL+ LPA+HVDTG+
Sbjct: 178 TEIHVDIRSAEEKAKIAGRELVNGDHPQVVEIWNNVFMEFNRKADGSLEKLPAQHVDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL  +LQ   SNYDTDVF P+   + + TG + Y+ K   D+ +K+++A RV+ DH+
Sbjct: 238 GFERLCMVLQGVQSNYDTDVFSPLIAKVSELTGGK-YTMKAKDDEEEKINIAIRVIVDHV 296

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R ++FAIADG  P N G  YV+RRILRRA+RY    L  ++ F   LV ++   MG  FP
Sbjct: 297 RAVAFAIADGQLPSNNGAGYVIRRILRRAIRYAFTFLDKKEPFIYELVEVLSAQMGAFFP 356

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLD 474
           E+  ++  ++ +I  EE SF +TL +G+       +  +GKV+SG  AF L+DT+GFP+D
Sbjct: 357 EITSQKELVKNVIKEEETSFLRTLEQGLHLLDNVIKQTEGKVVSGVKAFELYDTFGFPID 416

Query: 475 LTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATD 534
           LT L+  E+G  +D  GF+ AM E + RSR+A         V   D T       VL + 
Sbjct: 417 LTALILREKGYELDEAGFDAAMLEQKTRSRAASE-------VSTDDWT-------VLVSG 462

Query: 535 DSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGL 594
           +  +F+ +   ++ +K   T    I+S   G    IVL ++ FY E GGQ+ D G +   
Sbjct: 463 NVEQFVGYDQLENEVK--ITRYRKIDSKKDGKLFQIVLDATPFYPEGGGQVGDTGVLVSA 520

Query: 595 FGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFA 654
             +  V + +     ++HI          +V   ++ KVD D RK    NH+ TH+L+ A
Sbjct: 521 NDTIQVIDTKKENNLILHIVRELPA----NVEGILVAKVDVDARKQSMANHSATHLLHQA 576

Query: 655 LREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATL 714
           LR +LG HV+QKGS+V P  LRFDFSH   V  E L ++E+ VN++I   L +  + +  
Sbjct: 577 LRTILGTHVEQKGSLVAPTHLRFDFSHFSKVTEEELAQVEAFVNDRIHDHLPLVERRSIP 636

Query: 715 AEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTRE 774
                  G  A+FGE Y D VR +  G                  S ELCGGTH+ NT +
Sbjct: 637 MAQAIAEGAMALFGEKYGDEVRAIKFGE-----------------SMELCGGTHVGNTSD 679

Query: 775 AEAFALLSEEGIAKGIRRITAVTTGLAYKAF-EAACSLE------KEVDDASKIEGSLLE 827
              F ++SE  +A GIRRI A+T   A + + E   +L+      K   D  K  G+L +
Sbjct: 680 IWQFKIVSEGAVAAGIRRIEAITNKAARQFYAEQELTLKEIKMVLKNPQDTLKAVGALQD 739

Query: 828 KNQVRKAQKKVAEENLQKAVKVATE-TAEAAASNGKPFCISRVEVGLDAAAVRE 880
           +N   K +K+V +   +KA  +  +   +    NG  F    VEV LDA+  ++
Sbjct: 740 ENA--KLKKQVEQLLKEKAKNLKGDLKGQIQEVNGIAFL--AVEVDLDASGAKD 789


>gi|317475197|ref|ZP_07934464.1| tRNA synthetase class II [Bacteroides eggerthii 1_2_48FAA]
 gi|316908650|gb|EFV30337.1| tRNA synthetase class II [Bacteroides eggerthii 1_2_48FAA]
          Length = 873

 Score =  597 bits (1538), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 331/747 (44%), Positives = 436/747 (58%), Gaps = 61/747 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++RD+F  FFE K H    S+P+V  +DPTL+F NAGMNQ+K I LG        +K 
Sbjct: 4   ANEIRDSFKSFFESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGN-----HPAKY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWE L  V 
Sbjct: 59  KRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAWEYLVDVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +L    LYAT F G  + GL  DNEA   W +FLP   +L     DNFWEMGDTGPCGPC
Sbjct: 119 KLDPKDLYATVFEGSPEEGLERDNEAASYWEQFLPKDHILNGNKHDNFWEMGDTGPCGPC 178

Query: 240 SEIHYDRTGNRDAA-----SLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + A      LVN D P  IEIWN+VF+QFNR++D SL+ LPAK +DTG+
Sbjct: 179 SEIHVDSRSEEEKAKVPGSQLVNKDHPQVIEIWNLVFMQFNRKADSSLEGLPAKVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF PI  AI    G        G +  ++ D+A RV+ADHI
Sbjct: 239 GFERLVRTLQGKTSNYDTDVFQPILKAIGDMAGT-----TYGVN--EQQDIAMRVIADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++F+I DG  P N    YV+RRILRRAVRYG   L  +  F   L+ ++++ MG  +P
Sbjct: 292 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLIENMGGAYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ--GKV-LSGQDAFILWDTYGF 471
           EL  ++  I ++I  EE SF +TL  GI    K   D +  GK  +SG+DAF L+DT+GF
Sbjct: 352 ELNVQKELIAKVIKEEEDSFLRTLETGIRLLDKTMADAKAAGKTEISGKDAFTLYDTFGF 411

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E G+  DI+ F+  M + ++R+R+A   + G  I +    T  +   G  
Sbjct: 412 PLDLTELILRENGMTADIKEFDAEMQQQKQRARNAAAVETGDWITLQEGTTEFV---GYD 468

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            T+     + ++  K   + +Y                IVL  + FYAE GGQ+ D G +
Sbjct: 469 YTEYETSILRYRQIKQKNQTLYQ---------------IVLDKTPFYAESGGQVGDTGVL 513

Query: 592 EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHML 651
              F +  V + +      IHI   T+          + C VD D+R   A NH+ TH+L
Sbjct: 514 VNEFETIEVIDTKKENNLPIHI---TKKLPEHLEAPMMAC-VDTDKRAACAANHSATHLL 569

Query: 652 NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS-K 710
           + ALREVLGDHV+QKGS+V  + LRFDFSH + V  E +R++E IVN +I+A + +   +
Sbjct: 570 DAALREVLGDHVEQKGSLVNSDSLRFDFSHFQKVTDEEIRQVEHIVNAKIRANIPLKEYR 629

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
              + EAK + G  A+FGE Y D VRV+  G                  S E CGGTH++
Sbjct: 630 NIPIEEAKEL-GAIALFGEKYGDHVRVIQFGS-----------------SIEFCGGTHVA 671

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVT 797
            T       ++SE  +A G+RRI A T
Sbjct: 672 ATGNIGMMKIVSESSVAAGVRRIEAYT 698


>gi|317049269|ref|YP_004116917.1| alanyl-tRNA synthetase [Pantoea sp. At-9b]
 gi|316950886|gb|ADU70361.1| alanyl-tRNA synthetase [Pantoea sp. At-9b]
          Length = 875

 Score =  596 bits (1537), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 352/930 (37%), Positives = 515/930 (55%), Gaps = 81/930 (8%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    +      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGQDKRD-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWELLT  + +
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKKDAIAYAWELLTGEQWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
           +LP DRL+ T +          D+EA DIW     +P  R++  G         DNFW+M
Sbjct: 122 KLPKDRLWVTVY--------ETDDEAYDIWANDIGIPRERIIRIGDNKGSAYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPCSEI +D   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCSEIFFDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMQPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNY+ D+F  +  ++   TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYEIDLFAKLIKSVADVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A+D FF  LV  +++V
Sbjct: 283 VIADHIRSCAFLIADGVIPSNENRGYVLRRIIRRAVRHGN-MLGAKDAFFYKLVAPLIEV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +L++++A +  ++ AEE  F KTL +G+    +    +QG  L G+  F L+DT
Sbjct: 342 MGSAGEDLQRQQAQVENVLKAEEEQFAKTLERGLALLDEELAKLQGDTLDGETVFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           +GFP+DLT  +  ER L +D  GF  AM++ R+R+R A    A    V+  D+ +A    
Sbjct: 402 FGFPVDLTADVCRERDLKIDEAGFEVAMEQQRQRAREASGFGADYNNVIRIDSASAFKGY 461

Query: 529 GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDE 588
             LA              S ++A++   + ++ V  G +  +VL  + FY E GGQ+ D 
Sbjct: 462 DQLAL------------ASTVQALFVDGQQVDHVSAGQDAVVVLDETPFYGESGGQVGDT 509

Query: 589 GFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
           G + G    F V++ Q YG  + HIG LT+  G+  VG+ +  +VD +RR  I  NH+ T
Sbjct: 510 GVLAGNNAEFSVQDTQKYGQAIGHIGKLTQ--GQLRVGDRLNAQVDEERRARIRLNHSAT 567

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+L+ ALR+VLGDHV QKGS+V  + LRFDFSH + + P+ +R++E IVN QI+  L V 
Sbjct: 568 HLLHAALRQVLGDHVAQKGSLVNDKYLRFDFSHFEAMKPQEIRQVEDIVNAQIRRNLAVE 627

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
           +    L  AK   G  A+FGE Y   VRV+++G                  S ELCGGTH
Sbjct: 628 TNIMDLEAAKA-KGAMALFGEKYDQRVRVLSMG----------------DFSTELCGGTH 670

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEK 828
            + T +   F + SE G A G+RRI AVT   A     A      ++    K   S L +
Sbjct: 671 AARTGDIGLFRIQSESGTAAGVRRIEAVTGEGALAQVNAQSHQLHDIAQLVKANSSNLNE 730

Query: 829 ------NQVRKAQKKVAE-ENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREA 881
                 + VR  +K++ +  + Q A + A+ +++A    G    +S +   ++   +R  
Sbjct: 731 KVRGLVDHVRALEKELQQLRDQQAAQESASLSSKAIDVKGTKLLVSELS-NVEPKMLRTM 789

Query: 882 VLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKG 941
           +  +  Q G  ++V +T      +++     + +D+ K  E+   L A +    G  G G
Sbjct: 790 MDDLKNQLGSAIIVLATVAEGKVSLIAGVTKDLTDRVKAGELVGELAAQV----GGKGGG 845

Query: 942 KGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           +  +A   GT+   +  A+    ++ + +L
Sbjct: 846 RPDMAQAGGTNPQALAGALAGVQDWVSNRL 875


>gi|303236524|ref|ZP_07323109.1| alanine--tRNA ligase [Prevotella disiens FB035-09AN]
 gi|302483272|gb|EFL46282.1| alanine--tRNA ligase [Prevotella disiens FB035-09AN]
          Length = 897

 Score =  596 bits (1537), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 362/931 (38%), Positives = 516/931 (55%), Gaps = 69/931 (7%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++RD+F KFFE K HV   S+P+V  +DPTL+F NAGMNQ+K I LGT +P  +    
Sbjct: 15  ANEIRDSFKKFFESKGHVIVPSAPMVIKDDPTLMFTNAGMNQWKDIILGTKEPEPR---- 70

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK  AI++AWE L +V 
Sbjct: 71  -RRADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKENAIDYAWEYLVEVL 129

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +L    LY T F G  + G+A D+EA   W K LP   ++     DNFWEMG+TGPCGPC
Sbjct: 130 KLDPKDLYVTVFEGSPEEGIARDDEAASYWAKHLPEDHIINGNKHDNFWEMGETGPCGPC 189

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + A      LVN DDP  IEIWNIVF+QF R+SDG+L+PL    +DTG+
Sbjct: 190 SEIHVDSRSAEEKAKVPGRELVNKDDPQVIEIWNIVFMQFQRKSDGTLEPLAMNVIDTGM 249

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGAR----PYSGKVG--ADDADKVDMAYR 348
           GFERL  +LQ K SNYDTD+F P    I++ +G +      SGK G    + +K+D+A R
Sbjct: 250 GFERLVRMLQGKNSNYDTDIFQPTIKEIERLSGKKYGFTTPSGKEGEGKTEQEKIDIAMR 309

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           VVADH+R ++F+IAD   PGN    YV+RRILRRAVRY    L+ ++ F   L+N  +  
Sbjct: 310 VVADHMRAVAFSIADSQLPGNAKAGYVIRRILRRAVRYAYTFLEQKEAFIYKLLNTFIHE 369

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV--QGKV-LSGQDAFIL 465
           MG+ +PEL  +   I  +I  EE SF +TL KGI     A  ++  QGK  L G++AF L
Sbjct: 370 MGNAYPELPAQRELIARVIKEEEDSFLRTLEKGINLLTNAMDEMKAQGKTELDGKEAFRL 429

Query: 466 WDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAAL 525
           +DTYGFPLDLT+L+  E G  VD + F   M + + R+R+A   + G  +V+       +
Sbjct: 430 FDTYGFPLDLTELICRENGFTVDEKQFEAEMAQQKARARNAAVVENGDWVVLKEGEQEFV 489

Query: 526 HKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
              G   T+     + ++      K     + F E         IVL  + FY E GGQ+
Sbjct: 490 ---GYDYTEYECHILRYR------KVTQKKNTFFE---------IVLDHTPFYGEMGGQV 531

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G +     +  + + +      IHI          +V  + +  VD D+R   A NH
Sbjct: 532 GDQGVLVSEDETIDIIDTKRENNQSIHIVKQMPK----NVEADFMACVDTDKRDASAANH 587

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           T TH+L++AL++VLGDH +QKGS V  + LRFDFSH + V  E LR++E +VN+ I+ +L
Sbjct: 588 TATHLLDYALKQVLGDHCEQKGSYVSADTLRFDFSHFQKVTDEELRQVERMVNDMIRQDL 647

Query: 706 DVFSKEAT-LAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
                  T L EAK + G  A+FGE Y D VRV++ G                  S E C
Sbjct: 648 KCDEHRNTPLEEAKKM-GAVALFGEKYGDKVRVISFGP-----------------SCEFC 689

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVT----TGLAYKAFEAACSLEKEVDDASK 820
           GG H ++T     F +++E  +A GIRRI A+T        Y+  +    L+   ++A  
Sbjct: 690 GGIHATSTGRIGFFKIVNESSVAAGIRRIEALTGEQCEEAVYELEDTMRDLKAMFNNAKD 749

Query: 821 IEGSLLEKNQVRKAQKKVAEENLQKAV-KVATETAEAAAS-NGKPFCISRVEVGLDAAAV 878
           ++  + +  Q   A KK  E   Q+AV ++A    E+A + NG    + +  + ++ A+ 
Sbjct: 750 LKSVVAKYIQEHDAMKKEMESFRQQAVSRMANGLVESAETVNG--VKVVKAVLPVEPASA 807

Query: 879 REAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRC 938
           ++ V KV E     ++        NK ++   + +   +  +L   + +  A + +KG  
Sbjct: 808 KDIVFKVREAIPEKLVCVLGSTHENKPLLSIMLSDDMVKDHELNAGKIIREAAKLIKG-G 866

Query: 939 GKGKGGLASGQGTDAAQVTPAMDLAAEFAAM 969
           G G+   A   G D   V+ A++   E A +
Sbjct: 867 GGGQPHYAQAGGKDVEGVSAAVEKVIELANL 897


>gi|418294444|ref|ZP_12906339.1| alanyl-tRNA synthetase [Pseudomonas stutzeri ATCC 14405 = CCUG
           16156]
 gi|379065822|gb|EHY78565.1| alanyl-tRNA synthetase [Pseudomonas stutzeri ATCC 14405 = CCUG
           16156]
          Length = 874

 Score =  596 bits (1537), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 374/938 (39%), Positives = 522/938 (55%), Gaps = 92/938 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F +FFE+K H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLRFFEEKGHTRVASSSLIPANDPTLLFTNAGMNQFKDCFLGL-----EKRAY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           TRA  +QKC+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT  K
Sbjct: 58  TRATTSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAITYAWEFLTSEK 117

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFW 228
              LP ++L+ T +        A D+EA DIW K   +PA R++  G         DNFW
Sbjct: 118 WLNLPQEKLWVTVY--------ASDDEAYDIWTKEVGVPAERMVRIGDNKGAPYASDNFW 169

Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
            MGDTGPCGPC+EI +D   +           D    IEIWN VF+QFNR +DG + PLP
Sbjct: 170 AMGDTGPCGPCTEIFFDHGEHIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVMHPLP 229

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
           A  VDTG+G ER++++LQ+  SNY+ D+F  + +A   A G             ++   +
Sbjct: 230 APSVDTGMGLERVSAVLQHVNSNYEIDLFQSLLNAAADAIGC-----------TNEGQAS 278

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            +VVADHIR+  F IADG  P NEGR YVLRRI+RRA R+G++ L A+  FF+ +V  +V
Sbjct: 279 LKVVADHIRSCGFLIADGVTPSNEGRGYVLRRIVRRACRHGNK-LGAKGSFFHRIVAALV 337

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
             MGD FPELKQ++AHI  ++  EE  F KTL +G++  ++    + G V+ G   F L+
Sbjct: 338 AEMGDAFPELKQQQAHIERVLKNEEEQFAKTLEQGLKILEQDLAGLTGTVIPGDVVFKLY 397

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFP+DLT  +A ER L +D EGF   M   RER+RSA       A  MD ++     
Sbjct: 398 DTYGFPVDLTGDIARERNLTLDEEGFEREMQAQRERARSAS------AFGMDYNS----- 446

Query: 527 KRGVLATDDSFKFIWFQDHKSVIK--AIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
              ++  +   +FI +Q      K  A++     ++S+  G E  +VL  + FYAE GGQ
Sbjct: 447 ---LVKVEGETRFIGYQGTSGTGKVLALFKEGMVVDSLNAGEEGVVVLDQTPFYAESGGQ 503

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           I D G++E     F VR+    G   +H G +  G  R  VG +V   VD   R+  A N
Sbjct: 504 IGDCGYLEAQGLRFDVRDTSKAGSAFLHHGIVDSGTLR--VGADVEATVDASVRQATALN 561

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ ALRE+LG HV QKGS+V  ++LRFDFSH + + PE LR +E  VN +I+  
Sbjct: 562 HSATHLLHAALREILGVHVSQKGSLVDSQRLRFDFSHFEAIKPEQLRALEDRVNAEIRRN 621

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
             V  +E  +  AK   G  A+FGE Y D VRV+ +G                  S ELC
Sbjct: 622 SAVEIEETDIDTAKA-KGAMALFGEKYGDSVRVLTMGG---------------GFSVELC 665

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGS 824
           GGTH+S T +   F + SE G+A G+RRI AVT   A     AA    KE   A+ ++GS
Sbjct: 666 GGTHVSRTGDIGLFKITSEGGVAAGVRRIEAVTGAPALAYLNAAEEQLKEA--ANLVKGS 723

Query: 825 LLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEV-----------GL 873
              ++ +      + E N Q   ++    A+AA++ G     S V+V           GL
Sbjct: 724 ---RDNLLDKLGGILERNRQLEKELEQLKAKAASAAGNDLATSAVDVKGVRVLAARQDGL 780

Query: 874 DAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQP 933
           D  A+   V ++  + G  V++    +  +K V+ AGV +  D + +L+  + L      
Sbjct: 781 DGKALLALVDQLKNKLGSAVILLGGVQ-DDKVVLVAGVTQ--DLTSRLKAGD-LMKQAAA 836

Query: 934 LKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           + G  G G+  +A G G++ A++  A+ LA  FA   L
Sbjct: 837 VVGGKGGGRPDMAQGGGSEPARLDEALALARPFAEQAL 874


>gi|392396412|ref|YP_006433013.1| alanyl-tRNA synthetase [Flexibacter litoralis DSM 6794]
 gi|390527490|gb|AFM03220.1| alanyl-tRNA synthetase [Flexibacter litoralis DSM 6794]
          Length = 882

 Score =  596 bits (1537), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 334/832 (40%), Positives = 472/832 (56%), Gaps = 67/832 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A +VR TF  FF++K H+   S+P++P  D TL+F N+GM Q+K  FLG   P +     
Sbjct: 3   AKEVRQTFLNFFQEKQHLIVDSAPLIPKGDATLMFINSGMAQFKDYFLGNGIPPS----- 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           TR  +TQKC+R  GKHNDLDDVG DTYHHTFFEMLGNWSFGDYFK EA+ WAWELLT+VY
Sbjct: 58  TRITDTQKCLRVSGKHNDLDDVGIDTYHHTFFEMLGNWSFGDYFKQEALPWAWELLTEVY 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCK-DNFWEMGDTGPCGP 238
           +LP +RLY T F G+++  L  D E+ ++W + L +   + +G K DNFWEMG+ GPCGP
Sbjct: 118 KLPKERLYVTVFEGNKEDNLPLDIESFEVWKQILGSEDRIIYGNKKDNFWEMGEVGPCGP 177

Query: 239 CSEIHYD-RTGNR----DAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTG 293
            SEIH D RT       D  +LVN D P  IEIWN VF++F R+++ SL  LP++HVDTG
Sbjct: 178 SSEIHIDLRTDAERKKVDGKTLVNGDHPQVIEIWNNVFMEFERKANKSLVKLPSQHVDTG 237

Query: 294 LGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADH 353
           +GFERL   ++ K SNYDTDVF P+   ++  +G       +     +K D+A RV+ADH
Sbjct: 238 MGFERLVRAIEGKQSNYDTDVFTPLIKTVEAISG-------ISYGVEEKTDIAIRVIADH 290

Query: 354 IRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVF 413
           IR +SF IADG  P N  + YV+RRILRRAVRYG   L  ++ F   LV+I+ +   D F
Sbjct: 291 IRAISFVIADGQLPSNNKQGYVVRRILRRAVRYGYTYLDLKEPFLFELVHILAEQFDDTF 350

Query: 414 PELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPL 473
           PEL  ++  +  ++  EE SF +TL  GI++F++     +  ++ GQD F L+DT+GFP 
Sbjct: 351 PELDAQKDFVARVVKEEENSFLRTLENGIKRFEEVKNRTKENLIDGQDVFELYDTFGFPD 410

Query: 474 DLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLAT 533
           DLT LMA E G+ +DIEGF  A+++ ++RS+   + +      +  D +  +   G    
Sbjct: 411 DLTDLMAREAGMKIDIEGFTKALNQQKKRSQKDASSEKSDWHEIQKDESVRVDFLGYDTL 470

Query: 534 DDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEG 593
               K I +++     K  Y                IVL  + FYAE GGQ+ D G+I+ 
Sbjct: 471 QAKAKIIRWREITKKGKTFYQ---------------IVLNQTPFYAESGGQVGDRGYIQN 515

Query: 594 LFGS-------FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
           L  +         + + Q     ++HI    +    F+   + I  V  + R     NH+
Sbjct: 516 LDKNEDGKGEKISIIDTQKENDLIVHITK--KLPSDFTANYQAI--VSENLRCSTENNHS 571

Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD 706
            TH+L+ ALREVLG HV Q+GS+V  + LRFDFSH   +  E + +IE+IVN++I+  ++
Sbjct: 572 ATHLLHAALREVLGTHVQQRGSLVSEDILRFDFSHFSKMTDEEIEKIETIVNQKIRENIE 631

Query: 707 VFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGG 766
           +     T  E     G  A+FGE Y + VRVV   +K                S ELCGG
Sbjct: 632 LQEMRNTPIEEAKEMGAMALFGEKYGNSVRVVMFDKKY---------------SVELCGG 676

Query: 767 THLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIE---- 822
           TH+S T +   F ++SE  +A G+RR+ A+T   AY   +    L KE+    K      
Sbjct: 677 THVSATGKIGFFKIISESSVASGVRRLEALTGEKAYNWIQEQNKLVKEIRSIVKGNKNLK 736

Query: 823 ---GSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEV 871
               SL+E+N +   Q +  +E   K +K    T E    NG    I ++++
Sbjct: 737 DDVNSLVEQNAILSKQIQEFQEKEAKNIKKNLLT-EVKNENGINILIQKIKI 787


>gi|344202139|ref|YP_004787282.1| alanyl-tRNA synthetase [Muricauda ruestringensis DSM 13258]
 gi|343954061|gb|AEM69860.1| alanyl-tRNA synthetase [Muricauda ruestringensis DSM 13258]
          Length = 870

 Score =  596 bits (1537), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 353/865 (40%), Positives = 492/865 (56%), Gaps = 71/865 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + +VR+ F  FF++KNH    S+P+V  +DPTL+F NAGMNQ+K  FLG + P ++    
Sbjct: 3   SQEVRNQFLNFFKEKNHKIVPSAPMVMKDDPTLMFTNAGMNQFKEYFLGNSVPKSK---- 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  +TQKC+R  GKHNDL++VGKDTYHHT FEMLGNWS GDYFK EAI WAWELLT+V+
Sbjct: 59  -RLTDTQKCLRVSGKHNDLEEVGKDTYHHTMFEMLGNWSIGDYFKKEAIAWAWELLTEVF 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           ++  + LY + F G E  GL  D EA D+W   +P +R++    KDNFWEMGD GPCGPC
Sbjct: 118 KIDKESLYVSVFEGSEDDGLPLDQEAYDLWKAIVPENRIIKGNKKDNFWEMGDQGPCGPC 177

Query: 240 SEIHYD-----RTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D          D ASLVN D P  +EIWN+VF+QFNR+++GSL+PLP KH+DTG+
Sbjct: 178 SEIHVDIRPKEEKQKVDGASLVNQDHPQVVEIWNLVFMQFNRKANGSLEPLPEKHIDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL  +LQ K SNYDTDVF P+   ++  TG      K G D  ++ D+A RVVADH+
Sbjct: 238 GFERLCMVLQGKQSNYDTDVFTPLIREVEIITGK-----KYGKD--EQTDIAIRVVADHV 290

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R ++F+IADG  P N G  YV+RRILRRA+RYG   L     F   LV ++ + MG  FP
Sbjct: 291 RAVAFSIADGQLPSNTGAGYVIRRILRRAIRYGFTFLDTNKPFIYRLVKVLGEQMGKAFP 350

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLD 474
           ELK++   I  +I  EE+SF  TL +G+          + K ++G  AF L+DT+GFP+D
Sbjct: 351 ELKEQYQLIENVIKEEESSFLSTLEQGLVLLDSVINSSKDKTIAGDKAFELYDTFGFPID 410

Query: 475 LTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATD 534
           LT L+ EE+G  +D +GF  A+   ++RSR+A              +  +     VL TD
Sbjct: 411 LTALILEEKGYQLDTKGFEKALKAQKDRSRAA--------------SEVSKDDWNVLLTD 456

Query: 535 DSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGL 594
              +FI +   ++ +K +      + S   G++  +V   + FY E GGQ+ D+G++E  
Sbjct: 457 AEQEFIGYDSLEANVKLVKYRK--VTSKKEGDQYQLVFNLTPFYPEGGGQVGDKGYLEAP 514

Query: 595 FGSF-YVRNVQIYGGFVIHIG-SL-TEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHML 651
            G   Y+ + +     ++H   SL  E +G F         VD  +R   A NHT TH+L
Sbjct: 515 NGDVTYIIDTKRENNEIVHFAKSLPKEVSGTFK------AVVDEKQRWRTACNHTATHLL 568

Query: 652 NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKE 711
           + ALREVLG HV+QKGS V  + LRFDFSH   +  E LR++E+ VN +I   L +    
Sbjct: 569 HQALREVLGTHVEQKGSAVHSKYLRFDFSHFSKLTVEELRKVENFVNARIDGHLPLEENR 628

Query: 712 ATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSN 771
               +     G  A+FGE Y D VR +  G+                 S ELCGGTH+ N
Sbjct: 629 NVPMKEAMEQGAMALFGEKYGDTVRTIRFGQ-----------------SIELCGGTHVKN 671

Query: 772 TREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACS--------LEKEVDDASKIEG 823
           T +   F ++SE  +A GIRRI A+T+  A K F    +        + K   D  K   
Sbjct: 672 TADIWHFKIVSEGAVAAGIRRIEAITSD-AVKEFYFNNNRMLFEIKDMLKNSQDPVKSVA 730

Query: 824 SLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVL 883
           SL E+N   K Q +   ++  K +K     AE    NG  F   +V+  LDA  +++   
Sbjct: 731 SLQEENLALKKQVEQLLKDKAKGLKNEL-IAELEEVNGIQFLAKKVD--LDAGGIKDLAF 787

Query: 884 KVIEQKGMPVMVFSTDETTNKAVVC 908
           ++  Q     ++ ++++     + C
Sbjct: 788 EMGGQVENLFLLLASEKDEKAILSC 812


>gi|336125113|ref|YP_004567161.1| Alanyl-tRNA synthetase [Vibrio anguillarum 775]
 gi|335342836|gb|AEH34119.1| Alanyl-tRNA synthetase [Vibrio anguillarum 775]
          Length = 860

 Score =  596 bits (1537), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 365/918 (39%), Positives = 506/918 (55%), Gaps = 94/918 (10%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR  F  FFE K H    SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRRAFLSFFESKGHQIVDSSSLVPANDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT   +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIAYAWEFLTVTLKL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           PADRL  T +          D+EA DIW K   +PA R++  G K        DNFW+MG
Sbjct: 122 PADRLLVTVY--------ETDDEAFDIWNKKVGIPAERIIRIGDKPGGKAYESDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKH 289
           DTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG+++PLP   
Sbjct: 174 DTGPCGPCTEIFYDHGDHIWGGPPGSAEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPS 233

Query: 290 VDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRV 349
           VDTG+G ER+++I+Q   SNY+ DVF  +  A  + TG    S           + + RV
Sbjct: 234 VDTGMGIERISAIMQGVHSNYEIDVFQALIKAAAEVTGYDDLS-----------NQSLRV 282

Query: 350 VADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVM 409
           VADHIR+ +F I DG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF+ LV  + +VM
Sbjct: 283 VADHIRSCAFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGAFFHKLVGPLAQVM 341

Query: 410 GDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTY 469
           G    ELK+++A + +++  EE +FG+TL +G+     A  +++G VL G+  F L+DTY
Sbjct: 342 GTAGEELKKQQALVEKVLRIEEENFGRTLERGMAILNDALDNLEGSVLDGETVFKLYDTY 401

Query: 470 GFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRG 529
           GFP DLT  +A ER L +D +GF  AM+E R+R+R A      G    D +A        
Sbjct: 402 GFPADLTNDVARERELTIDEQGFEKAMEEQRQRAREA------GQFGTDYNA-------- 447

Query: 530 VLATDDSFKFIWFQ--DHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFD 587
           ++  D +  F  +     +S I A++     ++++  G++  ++L  + FYAE GGQ  D
Sbjct: 448 IIKVDTNTAFCGYSATQGESRIAAMFVDGNEVDTLSAGDKAILILGETPFYAESGGQCGD 507

Query: 588 EGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTC 647
            G I+   G F V + Q  G  + H G L EG    + G+E    VD  RR  I+ NH+ 
Sbjct: 508 AGVIQTATGLFKVEDTQKLGNAIAHHGELIEGV--LAKGDEAKAIVDAKRRAAISLNHSA 565

Query: 648 THMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDV 707
           TH+L+ ALR+VLG HV QKGS+V  E LRFDFSH + + P  L+ +E +VN QI+    +
Sbjct: 566 THLLHAALRQVLGSHVAQKGSLVKAESLRFDFSHLEAMTPVELKEVERLVNAQIRRNHTI 625

Query: 708 FSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGT 767
            +    +  AK   G  A+FGE Y D VRV+++G                  S ELCGG 
Sbjct: 626 ETNIMDIEAAKA-KGAMALFGEKYDDEVRVLSMG----------------DFSTELCGGI 668

Query: 768 HLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLE 827
           H SNT +   F ++SE GIA GIRRI AVT              E  +D   + +     
Sbjct: 669 HASNTGDIGLFKIVSEGGIAAGIRRIEAVTG-------------EGALDLLDQQQAQYEV 715

Query: 828 KNQVRKAQKKVAEENLQKAV-KVATETAEAAASNGKPFCISRVEV----GLDAAAVREAV 882
           K     A+ K  E+ LQ+   K+A + +    SN K     +V V    G D  A+R  V
Sbjct: 716 KVAEMAAKAKSLEKELQQLKDKLAAKESANLISNVKEIAGVKVLVAQLNGADNKALRGMV 775

Query: 883 LKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGK 942
            ++  Q G  +++   +   +K  + AGV +  D + +++  E +      + G+ G G+
Sbjct: 776 DELKNQLGSGIIMLG-NVADDKVGLIAGVTK--DLTAKVKAGELVNMVALQVGGK-GGGR 831

Query: 943 GGLASGQGTDAAQVTPAM 960
             +A   GTD   +  A+
Sbjct: 832 PDMAQAGGTDVNALPSAL 849


>gi|407692346|ref|YP_006817135.1| alanyl-tRNA ligase [Actinobacillus suis H91-0380]
 gi|407388403|gb|AFU18896.1| alanyl-tRNA ligase [Actinobacillus suis H91-0380]
          Length = 874

 Score =  596 bits (1537), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 356/937 (37%), Positives = 521/937 (55%), Gaps = 93/937 (9%)

Query: 61  TKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLT 120
           +++R +F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG      +    T
Sbjct: 5   SEIRQSFLDFFHSKGHTVVPSSSLVPENDPTLLFTNAGMNQFKDVFLGL-----EKRPYT 59

Query: 121 RACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KV 178
           RA   Q+C+RAGGKHNDL++VG    HHTFFEM+GN+SFGDYFK +AI++ WE LT  + 
Sbjct: 60  RATTAQRCVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKQDAIQFGWEYLTSPQW 119

Query: 179 YRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFWE 229
             LP ++LY T +          D+EA DIW K +  P   ++  G         DNFW 
Sbjct: 120 LGLPKEKLYVTVY--------ETDDEAYDIWNKIVGVPTDHIIRIGDNKGAPYASDNFWA 171

Query: 230 MGDTGPCGPCSEIHYDRTGNRDAASLVNN---DDPTCIEIWNIVFIQFNRESDGSLKPLP 286
           MGDTGPCGPC+EI YD  G+     L      D    IE+WNIVF+QFNR++DG+++ LP
Sbjct: 172 MGDTGPCGPCTEIFYDH-GDTFWGGLPGTPEEDGDRYIEVWNIVFMQFNRQADGTMEKLP 230

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
              VDTG+G ER+T+++Q+  SNY+TD+F  +   +         +G +   D D  + +
Sbjct: 231 KPSVDTGMGLERMTAVMQHVNSNYETDIFQTLIKEV---------AGLLNVTDLD--NKS 279

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            RVVADHIR  S+ IADG  P NEGR YVLRRI+RRAVR+G+ +L A++ FF  LV  + 
Sbjct: 280 LRVVADHIRACSYLIADGVIPSNEGRGYVLRRIIRRAVRHGN-LLGAKEAFFYKLVPTLA 338

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
            VMG     L Q++AHI++ + AEE  F +TL +G+   + A   V+   LSG+ AF L+
Sbjct: 339 TVMGHAGEILTQKQAHIQKTLKAEEEQFARTLERGLALLEDALTKVENNTLSGEVAFKLY 398

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFPLDLT  +  ER + +D  GF   M   RER++++ N                  
Sbjct: 399 DTYGFPLDLTADVCRERNITIDEAGFEAEMSAQRERAKASSN--------------FGTD 444

Query: 527 KRGVLATDDSFKFIWFQD--HKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
              V+  D    FI + +   ++ +  +++  + ++++  G    I+L  + FYAE GGQ
Sbjct: 445 YNNVIKVDGQTDFIGYDNLEAQATVVGLFSNGKAVDTIHSGESAVIILDQTPFYAEMGGQ 504

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           + D G I      F V + Q YG    HIG LT G+   ++G++V   V+ +RR+ I  N
Sbjct: 505 VGDSGLISTEICEFTVSDTQKYGQVFGHIGQLTSGS--LAIGDKVTAHVEINRRQAITAN 562

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ ALREVLGDHV QKGS+V  + LRFDFS  + +    L  IE IVN +I+  
Sbjct: 563 HSATHLLHSALREVLGDHVAQKGSLVSEDALRFDFSQPEAITKAQLEEIERIVNRKIREN 622

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
           + V  +   +  AK   G  A+FGE Y D VRVV +                   S ELC
Sbjct: 623 IQVVIETMDIESAKQ-KGAMALFGEKYGDVVRVVGM----------------TEFSIELC 665

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKI--- 821
           GGTH+ +T E   F L+SE  +A G+RR+ AVT     KA +   + ++ +  ++++   
Sbjct: 666 GGTHVQHTGEIGLFKLVSEGAVAAGVRRVEAVT---GEKAMDWLHNQQRVIQQSAELLKA 722

Query: 822 -EGSLLEKNQVRKAQKKVAEENLQK-----AVKVATETAEAAAS-NGKPFCISRVEVGLD 874
              SL+EK Q  + + K  E+ LQ+     A +  +E A+ A+  NG    + ++E G++
Sbjct: 723 DSNSLVEKIQQLQDKAKRTEKELQQLKDKFAAQAGSELAKQASQINGVNVIVQKLE-GVE 781

Query: 875 AAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPL 934
             ++R  V  +  Q    ++VF +    +K  +  GV +  D S ++   E + A  Q +
Sbjct: 782 TKSLRTMVDDLKNQFENAIVVFGS-VADDKVNLIVGVTK--DLSSKVNAGELVGAMAQQV 838

Query: 935 KGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
            G+ G G+  +A   G++   +  A+  A E+   KL
Sbjct: 839 GGKGG-GRADMAMAGGSEPQHLDSALKFAQEWIQAKL 874


>gi|283835574|ref|ZP_06355315.1| alanine--tRNA ligase [Citrobacter youngae ATCC 29220]
 gi|291068784|gb|EFE06893.1| alanine--tRNA ligase [Citrobacter youngae ATCC 29220]
          Length = 875

 Score =  596 bits (1537), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 359/915 (39%), Positives = 515/915 (56%), Gaps = 89/915 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT    +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAAYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSAEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNY+ D+F  + +++ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYEIDLFRSLIESVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A+D FF  LV  +V+V
Sbjct: 283 VIADHIRSCAFLIADGVVPSNENRGYVLRRIIRRAVRHGN-MLGAKDTFFYKLVGPLVEV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    ELK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGDELKRQQAMVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD EGF  AM+E R R+R A            AD  A +   
Sbjct: 402 YGFPVDLTADVCRERNIKVDEEGFEAAMEEQRRRAREASG--------FGADYNAMIRVD 453

Query: 529 GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDE 588
           G       FK     +    + A++   + ++++  G +  +VL  + FYAE GGQ+ D+
Sbjct: 454 GA----SEFKGYEHLELNGKVTALFVDGKAVDAINAGQDAVVVLDQTPFYAESGGQVGDK 509

Query: 589 GFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
           G ++G   +F V + Q YG  + HIG L+  AG   +G+ V   VD  RR  I  NH+ T
Sbjct: 510 GELKGAGFAFAVSDTQKYGQAIGHIGKLS--AGSLKIGDAVQADVDEARRARIRLNHSAT 567

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+++ ALR+VLG HV QKGS+V  + LRFDFSH + + P  +R +E +VN QI+  L + 
Sbjct: 568 HLMHAALRQVLGTHVAQKGSLVNDKVLRFDFSHTEAMKPAEIRAVEDLVNAQIRRNLPIE 627

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
           +    L  AK   G  A+FGE Y D VRV+++G                  S ELCGGTH
Sbjct: 628 TNIMDLEAAKA-KGAMALFGEKYDDHVRVLSMG----------------DFSTELCGGTH 670

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEG----- 823
            S T +   F ++SE G A G+RRI AVT   A     A    ++  D A  ++G     
Sbjct: 671 ASRTGDIGLFRIVSESGTAAGVRRIEAVTGEGAIHTVHAQS--DRLNDIAQLLKGDSQNI 728

Query: 824 -----SLLEKNQVRKAQKKVAEENLQKAVK-VATETAEAAASNGKPFCISRVEVGLDAAA 877
                S+LE+   R+ +K++ +   Q A +  A  +++A   NG    +S +   ++   
Sbjct: 729 GDKVRSVLER--TRQLEKELQQLKEQAAAQESANLSSKAVDINGVKLLVSEL-ADVEPKM 785

Query: 878 VREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGR 937
           +R  V  +  Q G  V+V +T     K  + AGV +  D + +++  E +    Q + G+
Sbjct: 786 LRTMVDDLKNQLGSTVIVLAT-VVEGKVSLIAGVSK--DVTDRVKAGELVGMVAQQVGGK 842

Query: 938 CGKGKGGLASGQGTD 952
            G G+  +A   GTD
Sbjct: 843 GG-GRPDMAQAGGTD 856


>gi|198245112|ref|YP_002216798.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|205353771|ref|YP_002227572.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|207858091|ref|YP_002244742.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|375120290|ref|ZP_09765457.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Dublin str. SD3246]
 gi|375124629|ref|ZP_09769793.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. SG9]
 gi|378956447|ref|YP_005213934.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Gallinarum/pullorum str. RKS5078]
 gi|421360409|ref|ZP_15810685.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 622731-39]
 gi|421363183|ref|ZP_15813425.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 639016-6]
 gi|421369506|ref|ZP_15819681.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 640631]
 gi|421370147|ref|ZP_15820314.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 77-0424]
 gi|421379112|ref|ZP_15829191.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 607307-6]
 gi|421383217|ref|ZP_15833255.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 485549-17]
 gi|421385134|ref|ZP_15835157.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 596866-22]
 gi|421390081|ref|ZP_15840057.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 596866-70]
 gi|421396507|ref|ZP_15846432.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 629164-26]
 gi|421399286|ref|ZP_15849181.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 629164-37]
 gi|421405491|ref|ZP_15855321.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 639672-46]
 gi|421409812|ref|ZP_15859601.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 639672-50]
 gi|421415119|ref|ZP_15864855.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 77-1427]
 gi|421417276|ref|ZP_15866986.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 77-2659]
 gi|421420614|ref|ZP_15870290.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 78-1757]
 gi|421428260|ref|ZP_15877871.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 22510-1]
 gi|421430702|ref|ZP_15880288.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 8b-1]
 gi|421435870|ref|ZP_15885406.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 648905 5-18]
 gi|421440288|ref|ZP_15889768.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 648901 6-18]
 gi|421443654|ref|ZP_15893093.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 50-3079]
 gi|421449125|ref|ZP_15898509.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 58-6482]
 gi|436799480|ref|ZP_20523766.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CHS44]
 gi|436807665|ref|ZP_20527708.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1882]
 gi|436818557|ref|ZP_20535190.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1884]
 gi|436832779|ref|ZP_20537069.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1594]
 gi|436852873|ref|ZP_20542898.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1566]
 gi|436861337|ref|ZP_20548521.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1580]
 gi|436867432|ref|ZP_20552586.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1543]
 gi|436872778|ref|ZP_20555660.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1441]
 gi|436880552|ref|ZP_20560311.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1810]
 gi|436891401|ref|ZP_20566101.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1558]
 gi|436899691|ref|ZP_20571102.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1018]
 gi|436903199|ref|ZP_20573663.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1010]
 gi|436914712|ref|ZP_20579559.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1729]
 gi|436919414|ref|ZP_20582195.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_0895]
 gi|436928705|ref|ZP_20587911.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_0899]
 gi|436938682|ref|ZP_20593469.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1457]
 gi|436945756|ref|ZP_20597584.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1747]
 gi|436955220|ref|ZP_20602095.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_0968]
 gi|436965954|ref|ZP_20606623.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1444]
 gi|436969653|ref|ZP_20608650.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1445]
 gi|436985155|ref|ZP_20614740.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1559]
 gi|436994083|ref|ZP_20618652.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1565]
 gi|437004736|ref|ZP_20621966.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1808]
 gi|437022014|ref|ZP_20628142.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1811]
 gi|437027288|ref|ZP_20630177.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_0956]
 gi|437043200|ref|ZP_20636713.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1455]
 gi|437050877|ref|ZP_20641022.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1575]
 gi|437062107|ref|ZP_20647473.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1725]
 gi|437067023|ref|ZP_20650085.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1745]
 gi|437073750|ref|ZP_20653192.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1791]
 gi|437082834|ref|ZP_20658577.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1795]
 gi|437096509|ref|ZP_20664874.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 576709]
 gi|437110360|ref|ZP_20667706.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 635290-58]
 gi|437118777|ref|ZP_20670512.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 607308-16]
 gi|437129319|ref|ZP_20675795.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 607308-19]
 gi|437135915|ref|ZP_20679553.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 607307-2]
 gi|437145946|ref|ZP_20685735.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 607308-9]
 gi|437153132|ref|ZP_20690238.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 629163]
 gi|437158939|ref|ZP_20693527.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. SE15-1]
 gi|437168819|ref|ZP_20699257.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CVM_N202]
 gi|437176049|ref|ZP_20703225.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CVM_56-3991]
 gi|437184277|ref|ZP_20708142.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CVM_76-3618]
 gi|437264525|ref|ZP_20719801.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CVM_81-2490]
 gi|437269615|ref|ZP_20722858.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. SL909]
 gi|437277827|ref|ZP_20727186.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. SL913]
 gi|437302048|ref|ZP_20733382.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CVM_69-4941]
 gi|437315655|ref|ZP_20737343.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 638970-15]
 gi|437327486|ref|ZP_20740428.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 17927]
 gi|437341555|ref|ZP_20744678.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CHS4]
 gi|437369099|ref|ZP_20749104.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 22558]
 gi|437408213|ref|ZP_20752369.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 543463 22-17]
 gi|437445557|ref|ZP_20758279.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 543463 40-18]
 gi|437463160|ref|ZP_20762842.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 561362 1-1]
 gi|437483922|ref|ZP_20769006.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 642044 4-1]
 gi|437495676|ref|ZP_20772820.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 642046 4-7]
 gi|437519258|ref|ZP_20778628.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 648898 4-5]
 gi|437526980|ref|ZP_20779988.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 648899 3-17]
 gi|437555801|ref|ZP_20784768.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 648900 1-16]
 gi|437574001|ref|ZP_20789663.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 648901 1-17]
 gi|437594209|ref|ZP_20795756.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 648901 39-2]
 gi|437605294|ref|ZP_20799473.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 648902 6-8]
 gi|437620337|ref|ZP_20804057.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 648903 1-6]
 gi|437644635|ref|ZP_20808720.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 648904 3-6]
 gi|437664752|ref|ZP_20814366.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 653049 13-19]
 gi|437675421|ref|ZP_20816756.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 642044 8-1]
 gi|437710952|ref|ZP_20826630.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 543463 42-20]
 gi|437721551|ref|ZP_20829075.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 648901 16-16]
 gi|437796058|ref|ZP_20837573.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 76-2651]
 gi|437808258|ref|ZP_20839963.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 33944]
 gi|437864249|ref|ZP_20848039.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 6.0562-1]
 gi|438094874|ref|ZP_20861829.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 81-2625]
 gi|438101497|ref|ZP_20864324.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 62-1976]
 gi|438116097|ref|ZP_20870616.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 53-407]
 gi|438121009|ref|ZP_20872117.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Pullorum str. ATCC 9120]
 gi|445130018|ref|ZP_21381065.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 9184]
 gi|445145594|ref|ZP_21387556.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Dublin str. SL1438]
 gi|445159875|ref|ZP_21393363.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Dublin str. HWS51]
 gi|445185522|ref|ZP_21398975.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 20037]
 gi|445220785|ref|ZP_21403039.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. SE10]
 gi|445244885|ref|ZP_21408136.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 436]
 gi|445336182|ref|ZP_21415624.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 18569]
 gi|445351793|ref|ZP_21420526.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 13-1]
 gi|445364902|ref|ZP_21425059.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. PT23]
 gi|197939628|gb|ACH76961.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|205273552|emb|CAR38539.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|206709894|emb|CAR34247.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|326624557|gb|EGE30902.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Dublin str. SD3246]
 gi|326628879|gb|EGE35222.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. SG9]
 gi|357207058|gb|AET55104.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Gallinarum/pullorum str. RKS5078]
 gi|395980976|gb|EJH90198.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 622731-39]
 gi|395981629|gb|EJH90850.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 640631]
 gi|395987644|gb|EJH96806.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 639016-6]
 gi|395995447|gb|EJI04512.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 607307-6]
 gi|395995451|gb|EJI04515.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 485549-17]
 gi|396007317|gb|EJI16273.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 77-0424]
 gi|396008961|gb|EJI17894.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 629164-26]
 gi|396015140|gb|EJI24023.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 596866-70]
 gi|396018766|gb|EJI27628.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 596866-22]
 gi|396023565|gb|EJI32363.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 639672-46]
 gi|396023745|gb|EJI32537.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 639672-50]
 gi|396027380|gb|EJI36143.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 629164-37]
 gi|396035154|gb|EJI43835.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 77-1427]
 gi|396042111|gb|EJI50733.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 77-2659]
 gi|396043659|gb|EJI52257.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 78-1757]
 gi|396048295|gb|EJI56844.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 22510-1]
 gi|396054528|gb|EJI63020.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 8b-1]
 gi|396056282|gb|EJI64758.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 648905 5-18]
 gi|396068423|gb|EJI76771.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 648901 6-18]
 gi|396069285|gb|EJI77623.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 50-3079]
 gi|396070422|gb|EJI78750.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 58-6482]
 gi|434943349|gb|ELL49487.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Pullorum str. ATCC 9120]
 gi|434959510|gb|ELL52956.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CHS44]
 gi|434968621|gb|ELL61373.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1882]
 gi|434971101|gb|ELL63662.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1884]
 gi|434981378|gb|ELL73265.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1594]
 gi|434984218|gb|ELL75958.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1566]
 gi|434985781|gb|ELL77468.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1580]
 gi|434992584|gb|ELL84023.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1543]
 gi|434999635|gb|ELL90809.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1441]
 gi|435005396|gb|ELL96318.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1810]
 gi|435005530|gb|ELL96450.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1558]
 gi|435012826|gb|ELM03501.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1018]
 gi|435019629|gb|ELM10073.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1010]
 gi|435022794|gb|ELM13090.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1729]
 gi|435029249|gb|ELM19307.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_0895]
 gi|435033395|gb|ELM23287.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_0899]
 gi|435034206|gb|ELM24096.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1457]
 gi|435035328|gb|ELM25173.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1747]
 gi|435045596|gb|ELM35222.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_0968]
 gi|435046364|gb|ELM35979.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1444]
 gi|435058971|gb|ELM48278.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1445]
 gi|435062785|gb|ELM51959.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1559]
 gi|435064708|gb|ELM53828.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1565]
 gi|435072027|gb|ELM60956.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1808]
 gi|435077248|gb|ELM66004.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1811]
 gi|435083850|gb|ELM72451.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1455]
 gi|435085347|gb|ELM73900.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_0956]
 gi|435088591|gb|ELM77048.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1725]
 gi|435093581|gb|ELM81921.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1575]
 gi|435097829|gb|ELM86088.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1745]
 gi|435107551|gb|ELM95534.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1791]
 gi|435108010|gb|ELM95988.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 576709]
 gi|435108407|gb|ELM96372.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CDC_2010K_1795]
 gi|435118610|gb|ELN06261.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 635290-58]
 gi|435126539|gb|ELN13933.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 607308-19]
 gi|435131499|gb|ELN18710.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 607308-16]
 gi|435136191|gb|ELN23281.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 607308-9]
 gi|435137461|gb|ELN24512.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 607307-2]
 gi|435140883|gb|ELN27825.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 629163]
 gi|435149296|gb|ELN35992.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CVM_N202]
 gi|435150414|gb|ELN37086.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. SE15-1]
 gi|435156720|gb|ELN43210.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CVM_56-3991]
 gi|435159532|gb|ELN45850.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CVM_81-2490]
 gi|435160888|gb|ELN47130.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CVM_76-3618]
 gi|435172562|gb|ELN58105.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. SL909]
 gi|435173223|gb|ELN58748.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. SL913]
 gi|435178128|gb|ELN63364.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CVM_69-4941]
 gi|435180131|gb|ELN65239.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 638970-15]
 gi|435191667|gb|ELN76223.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 17927]
 gi|435193221|gb|ELN77700.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. CHS4]
 gi|435204948|gb|ELN88597.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 543463 22-17]
 gi|435207345|gb|ELN90818.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 22558]
 gi|435209946|gb|ELN93217.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 543463 40-18]
 gi|435217353|gb|ELN99787.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 642044 4-1]
 gi|435218437|gb|ELO00838.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 561362 1-1]
 gi|435226466|gb|ELO08031.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 642046 4-7]
 gi|435227563|gb|ELO09054.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 648898 4-5]
 gi|435242251|gb|ELO22562.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 648900 1-16]
 gi|435246055|gb|ELO26076.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 648901 1-17]
 gi|435247414|gb|ELO27365.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 648899 3-17]
 gi|435251534|gb|ELO31145.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 648901 39-2]
 gi|435257237|gb|ELO36531.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 648902 6-8]
 gi|435257566|gb|ELO36848.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 648903 1-6]
 gi|435265555|gb|ELO44383.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 653049 13-19]
 gi|435273632|gb|ELO51897.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 648904 3-6]
 gi|435277509|gb|ELO55450.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 642044 8-1]
 gi|435288441|gb|ELO65460.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 543463 42-20]
 gi|435290855|gb|ELO67748.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 76-2651]
 gi|435294363|gb|ELO70999.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 648901 16-16]
 gi|435299926|gb|ELO76021.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 33944]
 gi|435314441|gb|ELO87866.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 81-2625]
 gi|435324180|gb|ELO96113.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 62-1976]
 gi|435327612|gb|ELO99263.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 53-407]
 gi|435335949|gb|ELP06015.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 6.0562-1]
 gi|444844416|gb|ELX69656.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Dublin str. HWS51]
 gi|444846367|gb|ELX71548.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Dublin str. SL1438]
 gi|444852409|gb|ELX77488.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 9184]
 gi|444870040|gb|ELX94584.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 20037]
 gi|444870488|gb|ELX94990.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. SE10]
 gi|444874138|gb|ELX98404.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 13-1]
 gi|444874270|gb|ELX98535.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 18569]
 gi|444883112|gb|ELY07020.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. PT23]
 gi|444890489|gb|ELY13818.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. 436]
          Length = 876

 Score =  596 bits (1537), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 355/916 (38%), Positives = 514/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT    +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR+++G+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQAEGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  + +A+ + TGA     K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIEAVAKVTGATDLGNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F +ADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  +++V
Sbjct: 283 VIADHIRSCAFLVADGVLPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIEV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    ELK+++A + +++  EE  F +TL +G+    +    +QG  L G+ AF L+DT
Sbjct: 342 MGSAGEELKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + +E++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   +F V + Q YG  + H+G L+ GA    VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGAGFTFAVDDTQKYGQAIGHLGKLSAGA--LKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + P  +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVAQKGSLVSDKVLRFDFSHNEAMKPSEIREVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLDAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A GIRRI AVT   A     A      ++         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGIRRIEAVTGEGAMATVHAQSDRLNDIAHLLKGDSQN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
              K+   L    Q+ K  +++ ++    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LGDKVRAVLERTRQLEKELQQLKDQ--AAAQESANLSSKAVDLNGVKLLVSEL-AGIEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  V+V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTVIVLAT-VVEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|374336829|ref|YP_005093516.1| alanyl-tRNA synthetase [Oceanimonas sp. GK1]
 gi|372986516|gb|AEY02766.1| alanyl-tRNA synthetase [Oceanimonas sp. GK1]
          Length = 875

 Score =  596 bits (1537), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 368/940 (39%), Positives = 531/940 (56%), Gaps = 99/940 (10%)

Query: 61  TKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLT 120
           +++R+ F ++F  + H    SS +VP NDPTLLF NAGMNQ+K +FLG      +     
Sbjct: 6   SELRNAFLEYFRQQGHQVVASSSLVPHNDPTLLFTNAGMNQFKDLFLGL-----EQRAYN 60

Query: 121 RACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYR 180
           RA ++Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT+V +
Sbjct: 61  RAVSSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIRFAWEFLTEVVK 120

Query: 181 LPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFWEMG 231
           LP D+L+ T +          D+EA  IW + +  P  R++  G         DNFW MG
Sbjct: 121 LPKDKLWVTVY--------ETDDEAFGIWSQEIGVPVDRIVRIGDNKGAQYASDNFWTMG 172

Query: 232 DTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKH 289
           DTGPCGPC+EI YD   +           D    IEIWN+VF+QFNR +DG+++PLP   
Sbjct: 173 DTGPCGPCTEIFYDHGEHIWGGPPGSPEEDGDRYIEIWNLVFMQFNRHADGTMEPLPKPS 232

Query: 290 VDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRV 349
           VDTG+G ER+ +ILQ   SNY+ D+F  +  A  +A         VG  D D  + + RV
Sbjct: 233 VDTGMGLERIATILQGVHSNYEIDLFQALIKAAAEA---------VGTTDLD--NKSLRV 281

Query: 350 VADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVM 409
           +ADHIR+ SF IADG  P NEGR YVLRRI+RRAVR+G + L A   FF+ LV  + + M
Sbjct: 282 IADHIRSCSFLIADGVMPSNEGRGYVLRRIIRRAVRHGRK-LGADKSFFHTLVGALCEQM 340

Query: 410 GDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILWDT 468
           G+ +PEL  +   I +++  EE  F +TL +G++  + A  ++ +GKVL G+  F L+DT
Sbjct: 341 GEAYPELNTQRPIIEKVLRLEEEQFARTLDRGLQLLEDAINELGEGKVLPGEVVFKLYDT 400

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP DLT  +  +R + +D  GF   M + RER++ A N     + V+  D   A    
Sbjct: 401 YGFPADLTADVLRDRDISIDEAGFETLMQQQRERAKEASNFGVDYSKVIKVDGETAFTGY 460

Query: 529 GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDE 588
             LA                +  ++   E + +++ G E  +VL ++ FYAE GGQ+ D 
Sbjct: 461 EHLA------------QPGKVTGLFKNGEPVPALIAGEEGAVVLDTTPFYAESGGQVGDA 508

Query: 589 GFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
           G I    G F V++ Q  G  ++H+G L    G   VGEEV   VD  RR+  A NH+ T
Sbjct: 509 GVIRMDDGLFVVKDTQKAGSGILHLGYLE--LGTLEVGEEVAAAVDGARRQATALNHSVT 566

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+L+ +LR++LGDHV QKGS+V PE+LRFDFSH + +  + LR +E +VN  I+A L V 
Sbjct: 567 HLLHASLRKLLGDHVTQKGSLVEPERLRFDFSHLEAMSAQELREVEDMVNRDIRANLPVS 626

Query: 709 SKEATLAEAKCINGLRAVFGEVY-PDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGT 767
           ++   L  AK   G  A+FGE Y  + VRVVA+G                 +S ELCGGT
Sbjct: 627 TELMDLEGAKRA-GATALFGEKYDENEVRVVAMG----------------EVSTELCGGT 669

Query: 768 HLSNTREAEAFALLSEEGIAKGIRRITAVT--TGLAYKAFEAACSLEKEVDD-ASKIEG- 823
           H+S T +   F +LSE GIA G+RRI AVT    LAY        L+ E+D  AS ++G 
Sbjct: 670 HVSRTGDIGLFKILSESGIAAGVRRIEAVTGEAALAY-----LHQLDHEIDQAASLVKGD 724

Query: 824 ---------SLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAAS-NGKPFCISRVEVGL 873
                     +LE++  R+ +K+V +   + A + +    E     NG    ++ +E G+
Sbjct: 725 TFSVSAKVRQMLERS--RQLEKEVEQLKGKLAAQASASLLEQVRDINGNKVLVANLE-GV 781

Query: 874 DAAAVREAV--LKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAAL 931
           DA ++R  +  LK   Q G  V+V  T  + +K  + AGV +  D + +++  E +    
Sbjct: 782 DAKSLRGTLDDLKSKLQSG--VVVLGT-VSGDKVSLIAGVTK--DLTGKVKAGELVNMVA 836

Query: 932 QPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           Q + G+ G G+  +A   G++ A +  A+D    + + +L
Sbjct: 837 QQVGGKGG-GRPDMAQAGGSEPAALPAALDSVTSWLSERL 875


>gi|448236180|ref|YP_001569241.2| alanyl-tRNA ligase [Salmonella enterica subsp. arizonae serovar
           62:z4,z23:- str. RSK2980]
 gi|205830248|sp|A9MFZ1.2|SYA_SALAR RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
          Length = 876

 Score =  596 bits (1536), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 359/936 (38%), Positives = 526/936 (56%), Gaps = 91/936 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT    +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA  IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ETDDEAYGIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNY+ D+F  + +A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYEIDLFRTLIEAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F +ADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  +++V
Sbjct: 283 VIADHIRSCAFLVADGVLPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIEV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    ELK+++A + +++  EE  F +TL +G+    +    +QG  L G+ AF L+DT
Sbjct: 342 MGSAGEELKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERDIKVDEAGFETAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + +E++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVNGKAVEAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G+  +F V + Q YG  + H+G L+ GA    VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGVGFTFAVNDTQKYGQAIGHLGKLSAGA--LKVGDVVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + P  +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGAHVAQKGSLVSDKVLRFDFSHNEAMKPSEIREVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETHIMELEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH   T +   F ++SE G A G+RRI AVT   A     A      ++         +
Sbjct: 668 GTHARRTGDIGLFRIISESGTAAGVRRIEAVTGEGAMATVHAQSDRLNDIAHLLKGDSQN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
              K+   L    Q+ K  +++ ++    A + A+ +++A   NG    +S +  G++  
Sbjct: 728 LGDKVRAVLERSRQLEKELQQLKDQ--AAAQESASLSSKAVDLNGVKLLVSEL-AGVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  V+V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTVIVLAT-VVEGKVSLIAGVSK--DVTGRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKLR 972
           + G G+  +A   GTDAA +  A+    ++ + KL+
Sbjct: 842 KGG-GRPDMAQAGGTDAAALPAALASVQDWVSAKLQ 876


>gi|150025983|ref|YP_001296809.1| alanyl-tRNA synthetase [Flavobacterium psychrophilum JIP02/86]
 gi|205830094|sp|A6H0Y3.1|SYA_FLAPJ RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|149772524|emb|CAL44007.1| Alanine--tRNA ligase [Flavobacterium psychrophilum JIP02/86]
          Length = 887

 Score =  596 bits (1536), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 371/939 (39%), Positives = 529/939 (56%), Gaps = 88/939 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R  + KFFE K H+   S+P+V  +DPTL+F N+GM Q+K  FLG   P     K 
Sbjct: 3   SKEIRQQYLKFFESKGHLIVPSAPIVLKDDPTLMFNNSGMAQFKEYFLGNGTP-----KS 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  +TQKC+R  GKHNDL+DVG DTYHHT FEMLGNWSFGDYFK EAI WAWELLT+VY
Sbjct: 58  PRIADTQKCLRVSGKHNDLEDVGFDTYHHTMFEMLGNWSFGDYFKKEAINWAWELLTEVY 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           ++P   LY + F G ++  +  D EA DIW   +   R++    KDNFWEMGD GPCGPC
Sbjct: 118 KIPKQNLYVSVFEGSKEDNVPFDQEAWDIWKGLIDEDRIILGNKKDNFWEMGDQGPCGPC 177

Query: 240 SEIHYD-RTGNRDAA----SLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D RT    A     SLVNND P  +EIWN VF++FNR++DGSL+ LPA+HVDTG+
Sbjct: 178 SEIHVDLRTPEEKAQVSGKSLVNNDHPQVVEIWNNVFMEFNRKADGSLEKLPAQHVDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVG--ADDADKVDMAYRVVAD 352
           GFERL   LQ K SNYDTDVF P+ + + Q TG +  S +V   +++ +K ++A RV+ D
Sbjct: 238 GFERLCMALQGKTSNYDTDVFTPLIEKVTQITGYKYTSNEVKNISEEQNKTNIAIRVIVD 297

Query: 353 HIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDV 412
           H+R ++FAIADG  P N G  YV+RRILRRA+RYG   L  ++ F   LV ++   MG+ 
Sbjct: 298 HVRAVAFAIADGQLPSNTGAGYVIRRILRRAIRYGFTFLDTKEPFITKLVAVLASQMGEF 357

Query: 413 FPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFP 472
           FPE+K ++  +  +I  EEASF +TL +G++   K   + +GK +SG  AF L+DT+GFP
Sbjct: 358 FPEIKSQQQLVTNVIREEEASFLRTLEQGLQLLDKVVAETKGKEVSGAKAFELYDTFGFP 417

Query: 473 LDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLA 532
           +DLT L+  E+G  +D  GFN AM E + RSR+A         V   D +       VL 
Sbjct: 418 IDLTALILREKGYELDEAGFNAAMQEQKNRSRAASE-------VFTEDWS-------VLI 463

Query: 533 TDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI- 591
             +   F+ +   ++ +K   T    + S   G    IVL ++ FY E GGQ+ D+G + 
Sbjct: 464 PGNIETFVGYDKTENDVKI--TRIRKVNSKKDGILYQIVLDNTPFYPEGGGQVGDKGTLV 521

Query: 592 --------EGLFGSFYVRNVQIYGGFVIHIG-SLTEGAGRFSVGEEVICKVDYDRRKLIA 642
                   E    +  + + +     ++H    L E     ++    + KV+ + R   +
Sbjct: 522 SANDSSDSEQAKQTIDIIDTKKENNLILHFAKQLPE-----NIETGFVAKVNTNLRASTS 576

Query: 643 PNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIK 702
            NH+ TH+++ ALR +LG HV+QKGS+V P+ LRFDFSH   V  + LR++E+ VN QI+
Sbjct: 577 KNHSATHLMHLALRSILGTHVEQKGSLVNPDYLRFDFSHFSKVSDDQLRQVEASVNAQIE 636

Query: 703 AELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAE 762
           A+L +        +     G  A+FGE Y D VR++  G                  S E
Sbjct: 637 AQLQLTEHRNIPIKEALDKGAMALFGEKYGDNVRMIEFGE-----------------SKE 679

Query: 763 LCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAF----EAACSLEKEV--- 815
           LCGG H+ NT +   F +LSE  +A GIRRI A+ TG A KAF    E   S  KEV   
Sbjct: 680 LCGGIHVKNTAQIWHFKILSEGAVAAGIRRIEAI-TGDAVKAFYTNQENTLSEIKEVLKK 738

Query: 816 -DDASKIEGSLLEKN-QVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGL 873
             D  K   SL + N +++K  +++ +E ++      T  +E    NG  F   +V+  L
Sbjct: 739 PQDILKSVTSLQDDNVKLKKQIEQLLKEKIEGLKN--TLVSEFQEINGINFLSKQVD--L 794

Query: 874 DAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTA--AL 931
             ++ ++ +  +   K    +V ++ E     + C         +K+L   + L A   +
Sbjct: 795 SMSSTKDLLQALGSLKPNSFVVLASIEENMPNIHCY-------IAKELVAGKGLNANVVI 847

Query: 932 QPLKGRCGKGKGG----LASGQGTDAAQVTPAMDLAAEF 966
           + L G+  +G GG     ASG+G + + +  A+  A EF
Sbjct: 848 KEL-GKYIEGNGGGQPFFASGKGKNVSGIKEALQKAIEF 885


>gi|440286460|ref|YP_007339225.1| alanyl-tRNA synthetase [Enterobacteriaceae bacterium strain FGI 57]
 gi|440045982|gb|AGB77040.1| alanyl-tRNA synthetase [Enterobacteriaceae bacterium strain FGI 57]
          Length = 875

 Score =  596 bits (1536), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 368/932 (39%), Positives = 525/932 (56%), Gaps = 85/932 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT    +
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQYAWELLTGENWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGTPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+T++LQ+  SNY+ D+F  + D++ + TGA            D  + + R
Sbjct: 234 SVDTGMGLERITAVLQHVNSNYEIDLFRKLIDSVAKVTGA-----------TDLTNKSLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRA+R+G+ +L A+D FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVTPSNENRGYVLRRIIRRAIRHGN-MLGAKDTFFYKLVGPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    ELK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEELKRQQAQVEQVLKTEEEQFARTLERGLALLDEELSKLTGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ERGL VD  GF  AM+E R R+R +            AD  A +   
Sbjct: 402 YGFPVDLTADVCRERGLKVDEAGFEAAMEEQRRRARESSG--------FGADYNAMIRVD 453

Query: 529 GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDE 588
           G       FK     +    + A++   + +ESV  G E  ++L  + FYAE GGQ+ D+
Sbjct: 454 GA----SEFKGYDHLELNGKVTALFIDGKAVESVAAGQEAVVILDQTPFYAESGGQVGDK 509

Query: 589 GFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
           G ++G   SF V + Q YG  + H+G LT  AG   VG+ V   VD  RR  I  NH+ T
Sbjct: 510 GELKGAGFSFSVNDTQKYGQAIGHLGKLT--AGSLKVGDAVQADVDEARRARIRLNHSAT 567

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+++ ALR++LG HV QKGS+V  + LRFDFSH + + PE +R +E +VN QI+  L + 
Sbjct: 568 HLMHAALRQILGTHVAQKGSLVNDKVLRFDFSHFEAMKPEEIRAVEDLVNAQIRRNLPIE 627

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
           +    L  AK   G  A+FGE Y D VRV+++G                  S ELCGGTH
Sbjct: 628 TNVMDLDAAKA-KGAMALFGEKYDDRVRVLSMG----------------DFSTELCGGTH 670

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEG---SL 825
            S T +   F ++SE G A G+RRI AVT   A  +  A    ++  D A  ++G   +L
Sbjct: 671 ASRTGDIGLFRIVSESGTAAGVRRIEAVTGEGAIASLHAES--DRLGDIAQLLKGDSHNL 728

Query: 826 LEKNQVRKAQKKVAEENLQK------AVKVATETAEAAASNGKPFCISRVEVGLDAAAVR 879
            EK +    + +  E+ LQ+      A + A  +++A   NG    +S +  G++   +R
Sbjct: 729 TEKVRTVLERTRQLEKELQQLKEQAAAQESANLSSKAENINGVKLLVSELS-GVEPKMLR 787

Query: 880 EAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCG 939
             V  +  Q G  ++V +T    +K  + AGV +  D + +++  E +    Q + G+ G
Sbjct: 788 TMVDDLKNQLGSAIIVLAT-VADDKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGGKGG 844

Query: 940 KGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
            G+  +A   GTDA  +  A+    E+   KL
Sbjct: 845 -GRPDMAQAGGTDATALPAALASVKEWVGAKL 875


>gi|298207536|ref|YP_003715715.1| alanyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
 gi|83850172|gb|EAP88040.1| alanyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
          Length = 870

 Score =  596 bits (1536), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 350/861 (40%), Positives = 478/861 (55%), Gaps = 69/861 (8%)

Query: 63  VRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRA 122
           +R TF +FF+ K H    S+P+V  +DPTL+F NAGMNQ+K  FLG  DP     K +R 
Sbjct: 6   IRKTFLEFFKSKKHSIVTSAPMVIKDDPTLMFTNAGMNQFKEFFLGNGDP-----KSSRV 60

Query: 123 CNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLP 182
            +TQKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWELLT+VY++ 
Sbjct: 61  TDTQKCLRVSGKHNDLEEVGIDTYHHTMFEMLGNWSFGDYFKEEAIAWAWELLTEVYKVN 120

Query: 183 ADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPCSEI 242
            D LY T F GD    L  D EA D W   +   R+L    KDNFWEMG  GPCGPCSEI
Sbjct: 121 KDNLYVTIFEGDASESLERDTEAYDFWKNHISEDRILNGNKKDNFWEMGAQGPCGPCSEI 180

Query: 243 HYDRTGNRD-----AASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFE 297
           H D     +      A LVN D P  +EIWN+VF+QFNR++DGSL+ LPA+HVDTG+GFE
Sbjct: 181 HVDLRSKEEKDKVSGAELVNEDHPQVVEIWNLVFMQFNRKADGSLEKLPAQHVDTGMGFE 240

Query: 298 RLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTL 357
           RL  +LQ+K SNYDTD F P+   I+  T A  Y        ++K D+A RV++DH+R +
Sbjct: 241 RLCMVLQDKTSNYDTDAFTPLIKEIETIT-ATTYGS------SEKTDIAIRVISDHVRAV 293

Query: 358 SFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELK 417
           +F+IADG  P N G  YV+RRILRR +RYG   L  ++ F   LV  + K MGD +PEL 
Sbjct: 294 AFSIADGQLPSNTGAGYVIRRILRRGIRYGFTFLNTKEPFIYKLVKTLTKQMGDAYPELV 353

Query: 418 QREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQ 477
           ++E  I  +I  EE+SF +TL +G+       +  + K +SG+ AF L+DTYGFP+DLT 
Sbjct: 354 KQENLIYNVIKEEESSFLRTLDQGLVLLDNIIEKSKSKEISGKKAFELYDTYGFPIDLTS 413

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSF 537
           L+  ERG  ++   F+  + + R+RSR A   + G  + +  DA                
Sbjct: 414 LILRERGFSLNEAEFDAELKKQRDRSREATKTETGDWVTLIDDAEQ-------------- 459

Query: 538 KFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFGS 597
           +FI +   ++ +K   T    +E+   G    +V   + FYAE GGQ+ D+G++E   G 
Sbjct: 460 EFIGYDHLEAQVK--LTRYRKVENKKDGEMYQLVFNLTPFYAEGGGQVGDKGYLESPDGD 517

Query: 598 -FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICK--VDYDRRKLIAPNHTCTHMLNFA 654
             Y+ + +     V+H               E   K  VD  +R   A NHT TH+L+ A
Sbjct: 518 VVYIVDTKKENNLVVHF------TKNLPKHPEATFKAVVDSKQRMRSASNHTATHLLHQA 571

Query: 655 LREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATL 714
           LR VLG HV+QKGS+V    LRFDFSH   V  E L ++E  VN +I+ +L +  +    
Sbjct: 572 LRSVLGTHVEQKGSMVHSGNLRFDFSHFSKVSAEELTQVEDFVNARIREQLPLEEQRNIP 631

Query: 715 AEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTRE 774
            +     G  A+FGE Y D VR +  G+                 S ELCGGTH++NT E
Sbjct: 632 HQKALDEGAIALFGEKYGDAVRTIRFGK-----------------SMELCGGTHVNNTSE 674

Query: 775 AEAFALLSEEGIAKGIRRITAVTTGL--AYKA-----FEAACSLEKEVDDASKIEGSLLE 827
              F ++SE  +A GIRRI A++      Y A      E   S+ K   D  K   SL E
Sbjct: 675 IRHFKIISEGAVASGIRRIEAISNDAVDTYYAKQNQILEDVKSILKNPQDTVKAVSSLQE 734

Query: 828 KNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIE 887
           +N   K Q +   ++  K +K A    E    NG    +   E+ LDA ++++   ++  
Sbjct: 735 ENSELKKQVEQLLKDKAKHLK-AELKQELETING--INVLAKEIDLDAGSMKDLAFEIGG 791

Query: 888 QKGMPVMVFSTDETTNKAVVC 908
           +     +VF ++      + C
Sbjct: 792 EVDNLFLVFGSNHNGKALLSC 812


>gi|224584605|ref|YP_002638403.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|224469132|gb|ACN46962.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
          Length = 876

 Score =  596 bits (1536), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 356/916 (38%), Positives = 512/916 (55%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT    +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGAMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  + +A+ + TGA     K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIEAVAKVTGATDLGNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F +ADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  +++V
Sbjct: 283 VIADHIRSCAFLVADGVLPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIEV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    ELK+++A + +++  EE  F +TL +G+    +    +QG  L G+ AF L+DT
Sbjct: 342 MGSAGEELKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + +E +  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVEVINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   +F V   Q YG  + H+G L+ GA    VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGAGFTFAVDATQKYGQAIGHLGKLSAGA--LKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + P  +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVAQKGSLVSDKVLRFDFSHNEAMKPSEIREVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLDAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A GIRRI AVT   A     A      ++         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGIRRIEAVTGEGAMATVHAQSDRLNDIAHLLKGDSQN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
              K+   L    Q+ K  +++ ++    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LGDKVRAVLERTRQLEKELQQLKDQ--AAAQESANLSSKAVDLNGVKLLVSEL-AGIEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  V+V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTVIVLAT-VVEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|423141317|ref|ZP_17128955.1| alanyl-tRNA synthetase [Salmonella enterica subsp. houtenae str.
           ATCC BAA-1581]
 gi|379050489|gb|EHY68381.1| alanyl-tRNA synthetase [Salmonella enterica subsp. houtenae str.
           ATCC BAA-1581]
          Length = 876

 Score =  596 bits (1536), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 354/916 (38%), Positives = 515/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT    +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNY+ D+F  + +A+ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYEIDLFRTLIEAVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F +ADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  +++V
Sbjct: 283 VIADHIRSCAFLVADGVLPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIEV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    ELK+++A + +++  EE  F +TL +G+    +    +QG  L G+ AF L+DT
Sbjct: 342 MGSAGEELKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARDASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + +E++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVEAIDAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   +F V + Q YG  + H+G L+ GA    VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGAGFTFAVDDTQKYGQAIGHLGKLSAGA--LQVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + P  +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGAHVAQKGSLVSDKVLRFDFSHNEAMKPSEIREVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETHIMDLEAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH + T +   F ++SE G A G+RRI AVT   A     A      ++         +
Sbjct: 668 GTHATRTGDIGLFRIISESGTAAGVRRIEAVTGEGAMATVHAQSDRLNDIAHLLKGDSQN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
              K+   L    Q+ K  +++ ++    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LGDKVRAVLERTRQLEKELQQLKDQ--AAAQESANLSSKAVDLNGVKLLVSEL-AGIEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  V+V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTVIVLAT-VVEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|86146326|ref|ZP_01064650.1| alanyl-tRNA synthetase [Vibrio sp. MED222]
 gi|85835805|gb|EAQ53939.1| alanyl-tRNA synthetase [Vibrio sp. MED222]
          Length = 860

 Score =  596 bits (1536), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 367/917 (40%), Positives = 516/917 (56%), Gaps = 92/917 (10%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR+ F KFFE K H    SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRNAFLKFFESKEHQIVDSSSLVPHNDPTLLFTNAGMNQFKDCFLGA-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK EAI +AWE LT+   L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEEAIGFAWEFLTETLGL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           P DRL  T +          D+EA +IW K   +PA +++  G K        DNFW MG
Sbjct: 122 PKDRLLVTVY--------ETDDEAFEIWNKKVGIPADKIVRIGDKEGGKKFESDNFWTMG 173

Query: 232 DTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
           DTGPCGPC+EI YD      G R        D    IEIWN VF+QFNR +DG+++PLP 
Sbjct: 174 DTGPCGPCTEIFYDHGEHIWGGRPGTP--EEDGDRFIEIWNNVFMQFNRHADGTMEPLPK 231

Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
             VDTG+G ER+++I+Q   SNY+ DVF  +  A  +          VG DD    + + 
Sbjct: 232 PAVDTGMGIERISAIMQGVHSNYEIDVFQKLIKATAEV---------VGHDDLS--NQSL 280

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RV+ADHIR+ SF IADG  P NEGR YVLRRI+RRAVR+G+++  AQ  FF+ LV ++ +
Sbjct: 281 RVIADHIRSCSFLIADGVMPSNEGRGYVLRRIIRRAVRHGNKI-GAQGVFFHKLVGVLAE 339

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWD 467
           VMG    ELK+++  + +++  EE +FG+TL +G+     A   ++GK L G+  F L+D
Sbjct: 340 VMGSAADELKKQQELVEKVLRIEEENFGRTLERGMVILNDALDALEGKELDGETVFKLYD 399

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
           TYGFP DLT  +A ER   +D EGF  AM+  R+R+R A      G    D +AT     
Sbjct: 400 TYGFPADLTNDVARERDFTIDEEGFEKAMEAQRKRAREA------GQFGTDYNAT----- 448

Query: 528 RGVLATDDSFKFIWFQDHKSV--IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
              +  D + +F  +   +    I A++   E + S+  G++  I+L  + FYAE GGQ 
Sbjct: 449 ---IKVDTNTEFCGYTGTEGAGEISALFVDGEEVSSLSAGDKAIIILEETPFYAESGGQC 505

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D G ++   G F V++ Q  G    H G L EG   F+ G++V   VD +RR  I+ NH
Sbjct: 506 GDAGTLKTASGLFKVQDTQKLGNAFAHHGELVEGV--FAQGDKVEATVDAERRAAISLNH 563

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+L+ ALREVLG+HV QKGS+V P+ LRFDFS+ + V P  ++ +E +VN Q++   
Sbjct: 564 SATHLLHSALREVLGEHVAQKGSLVKPDNLRFDFSNLEAVTPAQIKEVERLVNAQVRKNH 623

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    +  AK   G  A+FGE Y D VRV+++G                  S ELCG
Sbjct: 624 VIETNIMDIESAKE-KGAMALFGEKYDDEVRVLSMG----------------DFSTELCG 666

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEA-ACSLEKEVDDASKIEGS 824
           G H SNT +   F + SE GIA GIRRI AVT   A  A EA A + E+++ +++K   S
Sbjct: 667 GIHASNTGDIGLFKITSEGGIAAGIRRIEAVTGEAALDAVEAQANAYEEKLAESAKKAKS 726

Query: 825 LLEKNQVRKAQKKVAE-ENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVL 883
           L ++ Q+ K +   AE  N+   V+  +         G    ++ +E G D   +R  V 
Sbjct: 727 LEKEIQLLKEKMAAAEGANIMGKVEEIS---------GTKVLVAAIE-GADNKNLRTMVD 776

Query: 884 KVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKG 943
               Q G  +++ + +    K  + AGV +  D   +++  + +    + + G+ G G+ 
Sbjct: 777 NAKNQVGSGIILIA-NVADGKVGLIAGVTK--DLIGKVKAGDLVKMVAEQVGGKGG-GRP 832

Query: 944 GLASGQGTDAAQVTPAM 960
            +A   GTD   +  A+
Sbjct: 833 DMAQAGGTDVEALPEAL 849


>gi|189468166|ref|ZP_03016951.1| hypothetical protein BACINT_04561 [Bacteroides intestinalis DSM
           17393]
 gi|189436430|gb|EDV05415.1| alanine--tRNA ligase [Bacteroides intestinalis DSM 17393]
          Length = 872

 Score =  596 bits (1536), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 326/747 (43%), Positives = 440/747 (58%), Gaps = 61/747 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R++F  FFE K H    S+P+V  +DPTL+F NAGMNQ+K I LG        +K 
Sbjct: 4   ANEIRNSFKSFFESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGN-----HPAKY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI+WAWE L +V 
Sbjct: 59  KRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAIDWAWEYLVEVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           ++    LYAT F G  + GL  DNEA   W + LP   +L     DNFWEMGDTGPCGPC
Sbjct: 119 KIDPKNLYATVFEGSPEEGLERDNEAAAFWEQHLPKDHILNGNKHDNFWEMGDTGPCGPC 178

Query: 240 SEIHYDRTGNRDAA-----SLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + A      LVN D P  IEIWN+VF+QFNR++DGSL+ LPAK +DTG+
Sbjct: 179 SEIHIDSRPEEEKAKVPGSQLVNKDHPQVIEIWNLVFMQFNRKADGSLEGLPAKVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF PI  AI    G        G D  ++ D+A RV+ADHI
Sbjct: 239 GFERLVRTLQGKTSNYDTDVFQPILKAIADMAGT-----AYGKD--NQQDIAMRVIADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++F+I DG  P N    YV+RRILRRAVRYG   L  +  F   L+ ++++ MG+ +P
Sbjct: 292 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQRQAFMYKLLPVLIENMGEAYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ--GKV-LSGQDAFILWDTYGF 471
           EL+ +   I ++I  EE SF +TL  GI    K   D +  GK  +SG+DAF L+DT+GF
Sbjct: 352 ELEAQRELISKVIKEEEDSFLRTLETGIRLLDKTMADAKAAGKTEISGKDAFTLYDTFGF 411

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E G+  DI+ F+  M + ++R+R+A   + G  I +    T  +   G  
Sbjct: 412 PLDLTELILRENGMTADIKEFDAEMQQQKQRARNAAAIETGDWITLKERTTEFV---GYD 468

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            T+     + ++  K   + +Y                IVL  + FYAE GGQ+ D G +
Sbjct: 469 YTEYETSILRYRQVKQKNQTLYQ---------------IVLDYTPFYAESGGQVGDTGVL 513

Query: 592 EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHML 651
              F +  V + +      IHI   T+          + C VD ++R   A NH+ TH+L
Sbjct: 514 VSEFETIEVIDTKKENNLPIHI---TKKLPAHPEAPMMAC-VDTEKRAACAANHSATHLL 569

Query: 652 NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS-K 710
           + ALREVLG+HV+QKGS+V P+ LRFDFSH + V  E +R++E +VN +I+A + +   +
Sbjct: 570 DSALREVLGEHVEQKGSLVTPDSLRFDFSHFQKVTDEEIRQVEHLVNAKIRANIPLKEYR 629

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
              + +AK +  + A+FGE Y D VRV+  G                  S E CGGTH++
Sbjct: 630 NIPIEDAKELGAI-ALFGEKYGDHVRVIQFGS-----------------SVEFCGGTHVA 671

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVT 797
            T       ++SE  +A G+RRI A T
Sbjct: 672 ATGNIGMIKIVSESSVAAGVRRIEAYT 698


>gi|429887678|ref|ZP_19369188.1| Alanyl-tRNA synthetase [Vibrio cholerae PS15]
 gi|429225247|gb|EKY31514.1| Alanyl-tRNA synthetase [Vibrio cholerae PS15]
          Length = 860

 Score =  595 bits (1535), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 359/922 (38%), Positives = 515/922 (55%), Gaps = 80/922 (8%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR  F  FFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI++AWE LT V +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           P +RL  T +          D+EA DIW K   +PA R++  G K        DNFW+MG
Sbjct: 122 PKERLLVTVY--------ETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKH 289
           DTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG+++PLP   
Sbjct: 174 DTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPS 233

Query: 290 VDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRV 349
           VDTG+G ER+++I+Q   SNY+ DVF  +  A   A G +           D  + + RV
Sbjct: 234 VDTGMGIERISAIMQGVHSNYEIDVFQTLIKAAADAIGYQ-----------DLTNQSLRV 282

Query: 350 VADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVM 409
           VADHIR+ +F I DG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF+ LV  + +VM
Sbjct: 283 VADHIRSCAFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGAFFHKLVGPLAEVM 341

Query: 410 GDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTY 469
           G    ELK+++A + +++  EE +FG+TL +G+     A   + G+VL G+  F L+DTY
Sbjct: 342 GTAGAELKKQQALVEKVLRIEEENFGRTLDRGMSILNDALDQLSGQVLDGETVFKLYDTY 401

Query: 470 GFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRG 529
           GFP DLT  +A ERG  +D  GF  AM+E R+R+R A      G    D ++        
Sbjct: 402 GFPADLTNDVARERGFSIDEAGFEQAMEEQRQRAREA------GQFGTDYNSLIK----- 450

Query: 530 VLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEG 589
             AT+  F        +SV++ ++     + ++  G++  IVL ++ FYAE GGQ  D G
Sbjct: 451 -SATNTEFCGYTASRGQSVVREMFVEGAEVSTLSAGDKAIIVLDNTPFYAESGGQCGDTG 509

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
            ++   G F+V + Q  G  + H G L +G    + G++V   VD  RR  I+ NH+ TH
Sbjct: 510 VLKTDAGIFHVEDTQKLGNAIAHHGVLAQGV--LATGDQVDAIVDEKRRAAISLNHSATH 567

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +L+ ALR+VLG+HV QKGS+V  E LRFDFSH + + P  ++ +E +VN++I+   ++ +
Sbjct: 568 LLHAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTPAEIKEVERLVNQEIRHNHNIET 627

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
               + EAK   G  A+FGE Y D VRV+++G                  S ELCGG H 
Sbjct: 628 NIMNIDEAKA-KGAMALFGEKYDDQVRVLSMG----------------DFSTELCGGIHA 670

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKN 829
           SNT +   F ++SE GIA GIRRI AVT   A    +A  +           +  LLEK 
Sbjct: 671 SNTGDIGLFKIISEGGIAAGIRRIEAVTGEGALDYLDAQQAQHDAKVSEMAAKAKLLEK- 729

Query: 830 QVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQK 889
           ++++ + K+A +     +    + A      G    ++++  G D  A+R  V  +  Q 
Sbjct: 730 EIQQLKDKLAAKESAGLINQVKQIA------GVNVLVAQLN-GADNKALRGMVDDLKNQL 782

Query: 890 GMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQ 949
              +++   +    K  + AGV   +D + +++  E +      + G+ G G+  +A   
Sbjct: 783 SSGIIMLG-NVAEGKVGLIAGVT--NDLTNKVKAGELVNMVALQVGGK-GGGRPDMAQAG 838

Query: 950 GTDAAQVTPAMDLAAEFAAMKL 971
           GTDA  +  A++    + A +L
Sbjct: 839 GTDAHALPSALESVDAWIAERL 860


>gi|417360242|ref|ZP_12134400.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Give str. S5-487]
 gi|353587127|gb|EHC46521.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Give str. S5-487]
          Length = 885

 Score =  595 bits (1535), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 355/916 (38%), Positives = 515/916 (56%), Gaps = 82/916 (8%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT    +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  + +A+ + TGA     K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIEAVAKVTGATDLGNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F +ADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  +++V
Sbjct: 283 VIADHIRSCAFLVADGVLPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIEV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    ELK+++A + +++  EE  F +TL +G+    +    +QG  L G+ AF L+DT
Sbjct: 342 MGSAGEELKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R  S      G     +A    A +  
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRREASG----FGADCAREASGFGADYN- 456

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + +E++  G E  +VL  + FYAE GGQ+
Sbjct: 457 AMIRVDSASEFKGY-DHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPFYAESGGQV 515

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   +F V + Q YG  + H+G L+ GA    VG+ V   VD  RR  I  NH
Sbjct: 516 GDKGELKGAGFTFAVDDTQKYGQAIGHLGKLSAGA--LKVGDAVQADVDEARRARIRLNH 573

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + P  +R++E +VN QI+  L
Sbjct: 574 SATHLMHAALRQVLGTHVAQKGSLVSDKVLRFDFSHNEAMKPSEIRQVEDLVNAQIRRNL 633

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 634 PIETNIMDLDAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 676

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A GIRRI AVT   A     A      ++         +
Sbjct: 677 GTHASRTGDIGLFRIISESGTAAGIRRIEAVTGEGAMATVHAQSDRLNDIAHLLKGDSQN 736

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
              K+   L    Q+ K  +++ ++    A + A  +++A   NG    +S +  G++  
Sbjct: 737 LGDKVRAVLERTRQLEKELQQLKDQ--AAAQESANLSSKAVDLNGVKLLVSEL-AGIEPK 793

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  V+V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 794 MLRTMVDDLKNQLGSTVIVLAT-VVEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 850

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 851 KGG-GRPDMAQAGGTD 865


>gi|148978178|ref|ZP_01814708.1| alanyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
 gi|145962600|gb|EDK27876.1| alanyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
          Length = 860

 Score =  595 bits (1535), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 364/914 (39%), Positives = 510/914 (55%), Gaps = 86/914 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR+ F KFFE K H    SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRNAFLKFFESKGHQIVDSSSLVPHNDPTLLFTNAGMNQFKDCFLGA-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT+  +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIAFAWEFLTETLQL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           P DRL  T +          D+EA DIW K   +PA R++  G K        DNFW MG
Sbjct: 122 PKDRLLVTVY--------ETDDEAFDIWNKKVGVPADRIVRIGDKEGGKQFESDNFWTMG 173

Query: 232 DTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
           DTGPCGPC+EI YD      G R        D    IEIWN VF+QFNR +DG+++PLP 
Sbjct: 174 DTGPCGPCTEIFYDHGEHIWGGRPGTP--EEDGDRFIEIWNNVFMQFNRHADGTMEPLPK 231

Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
             VDTG+G ER+++I+Q   SNY+ DVF  +  A  +  G    S           + + 
Sbjct: 232 PAVDTGMGIERISAIMQGVHSNYEIDVFQKLIKATAETIGYEDLS-----------NQSL 280

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RV+ADHIR+ SF IADG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF+ LV ++ +
Sbjct: 281 RVIADHIRSCSFLIADGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGVFFHKLVGVLAE 339

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWD 467
           VMG    ELK+++  + +++  EE +FG+TL +G+    +A   ++GK L G+  F L+D
Sbjct: 340 VMGSAAEELKKQQELVEKVLRIEEENFGRTLERGMVILNEALDALEGKELDGETVFKLYD 399

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
           TYGFP DLT  +A ER   +D  GF  AM+  R+R+R A      G    D +AT  +  
Sbjct: 400 TYGFPADLTNDVARERDFTIDEAGFEKAMEVQRQRAREA------GQFGTDYNATIKVE- 452

Query: 528 RGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFD 587
                T+  F      +    I A++   E + S+  G++  I+L  + FYAE GGQ  D
Sbjct: 453 -----TNTEFCGYTGTEGAGEISALFVEGEEVASLSAGDKAIIILEETPFYAESGGQCGD 507

Query: 588 EGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTC 647
            G ++   G F V + Q  G    H G L EG   F+ G++V   VD +RR  I+ NH+ 
Sbjct: 508 TGTLKTASGLFKVEDTQKLGNAFAHHGELVEGV--FAKGDKVEATVDAERRAAISLNHSA 565

Query: 648 THMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDV 707
           TH+L+ ALREVLG+HV QKGS+V P+ LRFDFS+ + V P  ++ +E +VN Q++    +
Sbjct: 566 THLLHAALREVLGEHVAQKGSLVKPDNLRFDFSNLEAVTPAQIKEVERLVNAQVRKNHVI 625

Query: 708 FSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGT 767
            +    +  AK   G  A+FGE Y D VRV+++G                  S ELCGG 
Sbjct: 626 ETNIMDIESAKE-KGAMALFGEKYDDEVRVLSMG----------------DFSTELCGGI 668

Query: 768 HLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEA-ACSLEKEVDDASKIEGSLL 826
           H SNT +   F + SE GIA GIRRI AVT   A  A EA A + E+++ +++K   +L 
Sbjct: 669 HASNTGDIGLFKITSEGGIAAGIRRIEAVTGEAALDAVEAQANAYEEKLAESAKKAKALE 728

Query: 827 EKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVI 886
           ++ Q+ K +   AE         A    +    +G    ++ +E G D   +R  V    
Sbjct: 729 KEIQLLKEKMAAAES--------ANIMGKVEEISGTKVLVAAIE-GADNKNLRTMVDNAK 779

Query: 887 EQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLA 946
            Q G  +++ + +    K  + AGV +  D   +++  + +    + + G+ G G+  +A
Sbjct: 780 NQVGSGIILIA-NVADGKVGLIAGVTK--DLIGKVKAGDLVKMVAEQIGGKGG-GRPDMA 835

Query: 947 SGQGTDAAQVTPAM 960
              GTD   +  A+
Sbjct: 836 QAGGTDVEALPEAL 849


>gi|422921775|ref|ZP_16954982.1| alanyl-tRNA synthetase [Vibrio cholerae BJG-01]
 gi|341647990|gb|EGS72058.1| alanyl-tRNA synthetase [Vibrio cholerae BJG-01]
          Length = 860

 Score =  595 bits (1535), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 359/922 (38%), Positives = 516/922 (55%), Gaps = 80/922 (8%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR  F  FFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI++AWE LT V +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           P +RL  T +          D+EA DIW K   +PA R++  G K        DNFW+MG
Sbjct: 122 PKERLLVTVY--------ETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKH 289
           DTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG+++PLP   
Sbjct: 174 DTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPS 233

Query: 290 VDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRV 349
           VDTG+G ER+++I+Q   SNY+ DVF  +  A  +A G +           D  + + RV
Sbjct: 234 VDTGMGIERISAIMQGVHSNYEIDVFQTLIKAAAEAIGYQ-----------DLTNQSLRV 282

Query: 350 VADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVM 409
           VADHIR+ +F I DG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF+ LV  + +VM
Sbjct: 283 VADHIRSCAFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGAFFHKLVGPLAEVM 341

Query: 410 GDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTY 469
           G    ELK+++A + +++  EE +FG+TL +G+     A   + G+VL G+  F L+DTY
Sbjct: 342 GTAGVELKKQQALVEKVLRIEEENFGRTLDRGMSILNDALDQLSGQVLDGETVFKLYDTY 401

Query: 470 GFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRG 529
           GFP DLT  +A ERG  +D  GF  AM+E R+R+R A      G    D ++        
Sbjct: 402 GFPADLTNDVARERGFSIDEAGFEQAMEEQRQRAREA------GQFGTDYNSLIK----- 450

Query: 530 VLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEG 589
             AT+  F        +SV++ ++     + ++  G++  IVL ++ FYAE GGQ  D G
Sbjct: 451 -SATNTEFCGYTASRGQSVVREMFVEGAEVSTLSAGDKAIIVLDNTPFYAESGGQCGDTG 509

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
            ++   G F+V + Q  G  + H G L +G    + G++V   VD  RR  I+ NH+ TH
Sbjct: 510 VLKTDAGIFHVEDTQKLGNAIAHHGVLAQGV--LATGDQVDAIVDEKRRAAISLNHSATH 567

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +L+ ALR+VLG+HV QKGS+V  E LRFDFSH + + P  ++ +E +VN++I+   ++ +
Sbjct: 568 LLHAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTPAEIKEVERLVNQEIRHNHNIET 627

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
               + EAK   G  A+FGE Y D VRV+++G                  S ELCGG H 
Sbjct: 628 NIMNIDEAKA-KGAMALFGEKYDDQVRVLSMG----------------DFSTELCGGIHA 670

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKN 829
           SNT +   F ++SE GIA GIRRI AVT   A    +A  +           +  LLEK 
Sbjct: 671 SNTGDIGLFKIISEGGIAAGIRRIEAVTGEGALDYLDAQQAQHDAKVSEMAAKAKLLEK- 729

Query: 830 QVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQK 889
           ++++ + K+A +     +    + A      G    ++++  G D  A+R  V  +  Q 
Sbjct: 730 EIQQLKDKLAAKESAGLINQVKQIA------GVNVLVAQLN-GADNKALRGMVDDLKNQL 782

Query: 890 GMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQ 949
              +++   +    K  + AGV   +D + +++  E +      + G+ G G+  +A   
Sbjct: 783 SSGIIMLG-NVAEGKVGLIAGVT--NDLTNKVKAGELVNMVALQVGGK-GGGRPDMAQAG 838

Query: 950 GTDAAQVTPAMDLAAEFAAMKL 971
           GTDA  +  A++    + A +L
Sbjct: 839 GTDAHALPSALESVDAWIAERL 860


>gi|163786078|ref|ZP_02180526.1| alanyl-tRNA synthetase [Flavobacteriales bacterium ALC-1]
 gi|159877938|gb|EDP71994.1| alanyl-tRNA synthetase [Flavobacteriales bacterium ALC-1]
          Length = 870

 Score =  595 bits (1535), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 355/876 (40%), Positives = 487/876 (55%), Gaps = 67/876 (7%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R  F  FFE K H+   S+P+V  +DPTL+F N+GM  +K  FLG ADP     K 
Sbjct: 3   SQEIRSKFLNFFEGKQHLIVPSAPMVLKDDPTLMFVNSGMAPFKEYFLGNADP-----KK 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWELLT+VY
Sbjct: 58  NRIADSQKCLRVSGKHNDLEEVGYDTYHHTLFEMLGNWSFGDYFKKEAIAWAWELLTEVY 117

Query: 180 RLPADRLYATYFGGDEKA-GLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGP 238
            +  D LY T F G   A  L  D EA D+W +F+P  R+L    KDNFWEMGD GPCGP
Sbjct: 118 GIDKDMLYVTVFEGSNDADNLKMDQEAYDLWKEFIPEDRILMGNKKDNFWEMGDQGPCGP 177

Query: 239 CSEIHYD-----RTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTG 293
           CSEIH D          D  SLVN D P  +EIWN+VF+Q+NR+++ SL+ LP KH+DTG
Sbjct: 178 CSEIHVDIRSEEEKSKVDGKSLVNMDHPQVVEIWNLVFMQYNRKANKSLETLPNKHIDTG 237

Query: 294 LGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADH 353
           +GFERL  +LQ   SNYDTDVF PI   I+  T  + Y    G D+  KVD+A RV++DH
Sbjct: 238 MGFERLCMVLQGVQSNYDTDVFTPIIREIEAIT-HKDY----GKDE--KVDVAIRVISDH 290

Query: 354 IRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVF 413
           +R ++F+IADG  P N G  YV+RRILRRAVRYG   L  ++ F   LVNI+ K MG  F
Sbjct: 291 VRAVAFSIADGQLPSNNGAGYVIRRILRRAVRYGFTFLDKKEPFIYRLVNILSKKMGKAF 350

Query: 414 PELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPL 473
           PELK ++  I  +I  EE+SF +TL +G+       +  + K +SG   F L DTYGFP 
Sbjct: 351 PELKAQKQLIENVIKEEESSFLRTLEQGLVLLDGIVKTSKTKEISGSKVFELKDTYGFPE 410

Query: 474 DLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLAT 533
           DLT L+  E+G   + E F  ++   ++R R A          + +D    LH       
Sbjct: 411 DLTDLILREKGYTYNAEEFKTSLKAQQDRGREASE--------LKSDDWTILHH------ 456

Query: 534 DDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEG 593
           D+  +FI +   ++ +K   T    + S   G    +V   + FY E GGQ+ D+G++E 
Sbjct: 457 DEVEEFIGYDTLEAHVKI--TRYRKVTSKKDGEMYQLVFNITPFYPEGGGQVGDKGYLED 514

Query: 594 LFGS-FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVI-CKVDYDRRKLIAPNHTCTHML 651
             G   Y+ + +     +IH    T+   + S  +EV+   VD  +R     NHT TH+L
Sbjct: 515 EHGDVVYILDTKKENNLIIH---FTKNLPKHS--DEVLKAVVDIKQRYRTECNHTATHLL 569

Query: 652 NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKE 711
           + ALREVLGDHV+QKGS V  + LRFDFSH   +  E LR +E+ VN +I+ +L +    
Sbjct: 570 HQALREVLGDHVEQKGSAVHSKHLRFDFSHFSKLTLEELRDVENFVNSRIEGKLPLEENR 629

Query: 712 ATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSN 771
           +   E    +G  ++FGE Y D VR +  G+                 S ELCGGTH++N
Sbjct: 630 SVPKEQAIADGAMSLFGEKYGDNVRTIRFGQ-----------------SIELCGGTHVNN 672

Query: 772 TREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDA---SKIEGSLLEK 828
           T +   F + SE  +A GIRRI A+T       +     +  E+ D    +K     L+ 
Sbjct: 673 TADIWHFKITSESAVASGIRRIEAITNDAVKDFYFENNRVYFEMKDLLNNAKEPLKALQN 732

Query: 829 NQVRKAQKKVAEENL--QKAVKVATETA-EAAASNGKPFCISRVEVGLDAAAVREAVLKV 885
            Q      K   ENL   KA  +  E   E    NG  F   +++  LDA  +++   ++
Sbjct: 733 LQDENTDLKKQIENLLKDKAKNIKGELKNELTEINGVQFLAKKLD--LDAGGIKDVSFEL 790

Query: 886 IEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQL 921
             Q     ++F + E   KA++   + ++   SK L
Sbjct: 791 GSQFKNLFLLFGS-ENNGKAILSCYISKELVASKDL 825


>gi|104782873|ref|YP_609371.1| alanyl-tRNA synthetase [Pseudomonas entomophila L48]
 gi|122402439|sp|Q1I6Z8.1|SYA_PSEE4 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|95111860|emb|CAK16584.1| alanyl-tRNA synthetase [Pseudomonas entomophila L48]
          Length = 874

 Score =  595 bits (1535), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 364/939 (38%), Positives = 527/939 (56%), Gaps = 94/939 (10%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F +FFE++ H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLRFFEEQGHTRVASSSLIPGNDPTLLFTNAGMNQFKDCFLGQ-----EKRAY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           TRA ++QKC+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AW  LT  K
Sbjct: 58  TRAVSSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAITFAWNFLTSDK 117

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFW 228
              LP ++L+ T +        A D+EA DIW +   +PA R++  G         DNFW
Sbjct: 118 WLNLPKEKLWVTVY--------ASDDEAYDIWTQEVGVPAERMVRIGDNKGAPYASDNFW 169

Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
            MGDTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG L PLP
Sbjct: 170 TMGDTGPCGPCTEIFYDHGPDIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLP 229

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
           A  VDTG+G ER+++++Q+  SNY+ D+F  +  A  +A G            ++    +
Sbjct: 230 APSVDTGMGLERISAVMQHVHSNYEIDLFQSLLAAAAEAIGC-----------SNDEQPS 278

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            +VVADHIR+  F IADG  P NEGR YVLRRI+RRA R+G++ L A+  FF+ +V  +V
Sbjct: 279 LKVVADHIRSCGFLIADGVLPSNEGRGYVLRRIIRRACRHGNK-LGAKGSFFHKIVAALV 337

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
             MG+ FPELK ++AHI  ++  EE  F KTL +G+   ++    +QGKV+ G   F L+
Sbjct: 338 TEMGEAFPELKGQQAHIERVLKTEEEQFAKTLEQGLRILEQDLAQLQGKVVPGDVVFKLY 397

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFP+DLT  +A ER L +D  GF   M+  RER+RSA       A  MD ++     
Sbjct: 398 DTYGFPMDLTGDIARERELTIDEAGFEREMEAQRERARSAS------AFGMDYNS----- 446

Query: 527 KRGVLATDDSFKFIWFQ--DHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
              ++  D +  F+ +   + +  + A+Y   + +E +  G E  +VL  + FYAE GGQ
Sbjct: 447 ---LVKVDTATDFLGYDTTEGQGKVIALYKDGQSVEQLTEGEEGVVVLDRTPFYAESGGQ 503

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           + D G+++     F VR+    GG  +H G +  GA   +VG  V  +VD D +   + N
Sbjct: 504 VGDSGYLQAGAARFDVRDTTKTGGAFLHHGVIASGA--LTVGATVDARVDADVQHATSLN 561

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ ALR+VLG+HV QKGS+V  ++LRFDFSH + V PE ++ +E IVN +++  
Sbjct: 562 HSATHLLHEALRQVLGEHVQQKGSLVDSQRLRFDFSHFEAVKPEQIKALEDIVNREVRRN 621

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
            +V ++   +  AK   G  A+FGE Y D VRV+++G                  S ELC
Sbjct: 622 TEVQTELTDIETAKA-KGAMALFGEKYGDTVRVLSMGG---------------DFSVELC 665

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK-IEG 823
           GG H   T +   F ++SE G+A G+RRI A+T      A     + E++V +A++ ++G
Sbjct: 666 GGIHAKRTGDISLFKIISEGGVASGVRRIEAIT---GAAALAYLNAAEEQVKEAAQLVKG 722

Query: 824 SLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEV-----------G 872
           +   ++ +      V E N Q   ++    A+AA++ G     + VEV           G
Sbjct: 723 N---RDNLIDKLSAVLERNRQLEKQLEQLQAKAASAAGDDLSNAAVEVKGAKVLAARLDG 779

Query: 873 LDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQ 932
            D  A+   V ++  + G  V++  + E   K V+ AGV +  D S QL+  + L     
Sbjct: 780 QDGKALLALVDQLKNKLGHAVILLGS-EHEGKVVLVAGVTK--DLSGQLKAGD-LMKQAA 835

Query: 933 PLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
            + G  G G+  +A G G D A +  A+ LA  FA   L
Sbjct: 836 AVVGGKGGGRPDMAQGGGVDVASLDQALALAVPFAEQGL 874


>gi|445162149|ref|ZP_21393713.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. SE8a]
 gi|444868889|gb|ELX93500.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. SE8a]
          Length = 876

 Score =  595 bits (1535), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 358/918 (38%), Positives = 520/918 (56%), Gaps = 95/918 (10%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT    +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR+++G+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQAEGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  + +A+ + TGA     K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIEAVAKVTGATDLGNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F +ADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  +++V
Sbjct: 283 VIADHIRSCAFLVADGVLPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIEV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    ELK+++A + +++  EE  F +TL +G+    +    +QG  L G+ AF L+DT
Sbjct: 342 MGSAGEELKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + +E++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   +F V + Q YG  + H+G L+ GA    VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGAGFTFAVDDTQKYGQAIGHLGKLSAGA--LKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + P  +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVAQKGSLVSDKVLRFDFSHNEAMKPSEIREVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLDAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEG-- 823
           GTH S T +   F ++SE G A GIRRI AVT   A     A    ++  D A  ++G  
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGIRRIEAVTGEGAMATVHAQS--DRLNDIAHLLKGDS 725

Query: 824 --------SLLEKNQVRKAQKKVAEENLQKAVKVATE-TAEAAASNGKPFCISRVEVGLD 874
                   ++LE+   R+ +K++ +   Q A + +   +++A   NG    +S +  G++
Sbjct: 726 QNLGDKVRAVLER--TRQLEKELQQLKDQAAAQESVNLSSKAVDLNGVKLLVSEL-AGIE 782

Query: 875 AAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPL 934
              +R  V  +  Q G  V+V +T     K  + AGV +  D + +++  E +    Q +
Sbjct: 783 PKMLRTMVDDLKNQLGSTVIVLAT-VVEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQV 839

Query: 935 KGRCGKGKGGLASGQGTD 952
            G+ G G+  +A   GTD
Sbjct: 840 GGKGG-GRPDMAQAGGTD 856


>gi|384423811|ref|YP_005633169.1| alanyl-tRNA synthetase [Vibrio cholerae LMA3984-4]
 gi|327483364|gb|AEA77771.1| Alanyl-tRNA synthetase [Vibrio cholerae LMA3984-4]
          Length = 860

 Score =  595 bits (1535), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 361/922 (39%), Positives = 517/922 (56%), Gaps = 80/922 (8%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR  F  FFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI++AWE LT V +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           P +RL  T +          D+EA DIW K   +PA R++  G K        DNFW+MG
Sbjct: 122 PKERLLVTVY--------ETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKH 289
           DTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG+++PLP   
Sbjct: 174 DTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPS 233

Query: 290 VDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRV 349
           VDTG+G ER+++I+Q   SNY+ DVF  +  A   A G +           D  + + RV
Sbjct: 234 VDTGMGIERISAIMQGVHSNYEIDVFQTLIKAAADAIGYQ-----------DLTNQSLRV 282

Query: 350 VADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVM 409
           VADHIR+ +F I DG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF+ LV  + +VM
Sbjct: 283 VADHIRSCAFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGAFFHKLVGSLAEVM 341

Query: 410 GDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTY 469
           G    ELK+++A + +++  EE +FG+TL +G+     A   + G+VL G+  F L+DTY
Sbjct: 342 GTAGVELKKQQALVEKVLRIEEENFGRTLDRGMSILNDALDQLSGQVLDGETVFKLYDTY 401

Query: 470 GFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRG 529
           GFP DLT  +A ERG  +D  GF  AM+E R+R+R A      G    D +   +L K  
Sbjct: 402 GFPADLTNDVARERGFSIDEAGFEQAMEEQRQRAREA------GQFGTDYN---SLIKS- 451

Query: 530 VLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEG 589
             AT+  F        +SV++ ++     + ++  G++  IVL ++ FYAE GGQ  D G
Sbjct: 452 --ATNTEFCGYTASRGQSVVREMFVEGAEVSTLSAGDKAIIVLDNTPFYAESGGQCGDTG 509

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
            ++   G F+V + Q  G  + H G L +G    + G++V   VD  RR  I+ NH+ TH
Sbjct: 510 VLKTDAGIFHVEDTQKLGNAIAHHGVLAQGV--LATGDQVDAIVDEKRRAAISLNHSATH 567

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +L+ ALR+VLG+HV QKGS+V  E LRFDFSH + + P  ++ +E +VN++I+   ++ +
Sbjct: 568 LLHAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTPAEIKEVERLVNQEIRHNHNIET 627

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
               + EAK   G  A+FGE Y D VRV+++G                  S ELCGG H 
Sbjct: 628 NIMNIDEAKA-KGAMALFGEKYDDQVRVLSMG----------------DFSTELCGGIHA 670

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKN 829
           SNT +   F ++SE GIA GIRRI AVT   A    +A  +           +  LLEK 
Sbjct: 671 SNTGDIGLFKIISEGGIAAGIRRIEAVTGEGALDYLDAQQAQHDAKVSEMAAKAKLLEK- 729

Query: 830 QVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQK 889
           ++++ + K+A +     +    + A      G    ++++  G D  A+R  V  +  Q 
Sbjct: 730 EIQQLKDKLAAKESAGLINQVKQIA------GVNVLVAQLN-GADNKALRGMVDDLKNQL 782

Query: 890 GMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQ 949
              +++   +    K  + AGV   +D + +++  E +      + G+ G G+  +A   
Sbjct: 783 SSGIIMLG-NVAEGKVGLIAGVT--NDLTNKVKAGELVNMVALQVGGK-GGGRPDMAQAG 838

Query: 950 GTDAAQVTPAMDLAAEFAAMKL 971
           GTDA  +  A++    + A +L
Sbjct: 839 GTDAHALPSALESVDAWIAERL 860


>gi|262172368|ref|ZP_06040046.1| alanyl-tRNA synthetase [Vibrio mimicus MB-451]
 gi|261893444|gb|EEY39430.1| alanyl-tRNA synthetase [Vibrio mimicus MB-451]
          Length = 860

 Score =  595 bits (1534), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 367/924 (39%), Positives = 519/924 (56%), Gaps = 84/924 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR  F  FFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI++AWE LT V +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTGVLQL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           P +RL  T +          D+EA DIW K   +PA R++  G K        DNFW+MG
Sbjct: 122 PKERLLVTVY--------ETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKH 289
           DTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG+++PLP   
Sbjct: 174 DTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPS 233

Query: 290 VDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRV 349
           VDTG+G ER+++I+Q   SNY+ DVF  +  A   A G +           D  + + RV
Sbjct: 234 VDTGMGIERISAIMQGVHSNYEIDVFQTLIKAAADAIGYQ-----------DLTNQSLRV 282

Query: 350 VADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVM 409
           VADHIR+ +F I DG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF+ LV  + +VM
Sbjct: 283 VADHIRSCAFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGAFFHKLVGPLAEVM 341

Query: 410 GDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTY 469
           G    ELK+++A + +++  EE +FG+TL +G+    +A   + G+VL G+  F L+DTY
Sbjct: 342 GTAGVELKKQQALVEKVLRIEEENFGRTLDRGMSILNEALDQLSGQVLDGETVFKLYDTY 401

Query: 470 GFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRG 529
           GFP DLT  +A ERG  +D  GF  AM+E R+R+R A      G    D +   +L K  
Sbjct: 402 GFPADLTNDVARERGFSIDETGFEQAMEEQRQRAREA------GQFGTDYN---SLIKS- 451

Query: 530 VLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEG 589
             AT+  F        +SV++ I+     + ++  G++  IVL ++ FYAE GGQ  D G
Sbjct: 452 --ATNTEFCGYTASRGQSVVREIFVEGAEVSALSAGDKAIIVLDNTPFYAESGGQCGDTG 509

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
            ++   G F+V +    G  + H G L +G    + G++V   VD  RR  I+ NH+ TH
Sbjct: 510 VLKTEAGVFHVEDTHKLGNAIAHHGVLAQGV--LAKGDQVDAIVDEQRRAAISLNHSATH 567

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +L+ ALR+VLG+HV QKGS+V  E LRFDFSH + +    ++ +E +VN++I+    + +
Sbjct: 568 LLHAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTAAEIKEVERLVNQEIRRNHSIET 627

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
               + EAK   G  A+FGE Y D VRV+++G                  S ELCGG H 
Sbjct: 628 NIMNIDEAKA-KGAMALFGEKYDDQVRVLSMG----------------DFSTELCGGIHA 670

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVT--TGLAYKAFEAACSLEKEVDDASKIEGSLLE 827
           SNT +   F + SE GIA GIRRI AVT    L Y   + A    K V+ A+K    LLE
Sbjct: 671 SNTGDIGLFKITSEGGIAAGIRRIEAVTGEGALDYIEAQQAQHDAKVVEMAAK--AKLLE 728

Query: 828 KNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIE 887
           K ++++ + K+A +     +    + A      G    ++ +  G D  A+R  V  +  
Sbjct: 729 K-EIQQLKDKLAAKESSGLINQVKQIA------GVNVLVAELN-GADNKALRGMVDDIKN 780

Query: 888 QKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLAS 947
           Q G  +++   +    K  + AGV   SD + +++  E +      + G+ G G+  +A 
Sbjct: 781 QLGSGIIMLG-NVAEGKVGLIAGVT--SDLTNKVKAGELVNMVALQVGGK-GGGRPDMAQ 836

Query: 948 GQGTDAAQVTPAMDLAAEFAAMKL 971
             GTDA  +  A++    + A +L
Sbjct: 837 AGGTDAHALPSALESVDAWIAERL 860


>gi|325280523|ref|YP_004253065.1| alanyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
 gi|324312332|gb|ADY32885.1| alanyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
          Length = 877

 Score =  595 bits (1534), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 341/805 (42%), Positives = 470/805 (58%), Gaps = 74/805 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R  F  FFE K H    S+P+V  +DPTL+F NAGMNQ+K I LG  +P     K 
Sbjct: 3   SAEIRQKFLDFFESKGHTIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNINP-----KH 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK +AI +AWE LT V 
Sbjct: 58  RRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKEDAIAFAWEFLTGVM 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
            L  +RLYAT F G ++ GL  D EAR IW+ +L   R+L    KDNFWEMGD GPCGPC
Sbjct: 118 GLDKNRLYATVFEGSKEDGLEGDAEARKIWMNYLSEDRILFGNKKDNFWEMGDMGPCGPC 177

Query: 240 SEIHYDRTGN-----RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D         +    LVN D+P  IEIWN+VF+Q+NR++DGSL+ LP  HVDTG+
Sbjct: 178 SEIHIDLRPEEERKLKSGRELVNQDNPLVIEIWNLVFMQYNRKADGSLENLPNHHVDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   +Q K SNYDTDVF PI D I + +G      K G   +   D+A RV+ADH+
Sbjct: 238 GFERLCMAVQGKTSNYDTDVFTPIIDEISRLSGL-----KYGV--SHDADVAMRVIADHL 290

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT+SF+I DG  P N    YV+RRILRRAVRY    L  ++ F   LV ++++VMG  +P
Sbjct: 291 RTISFSITDGQLPSNVKAGYVIRRILRRAVRYAYTYLDQKEAFMYRLVPVLIEVMGKHYP 350

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK---VLSGQDAFILWDTYGF 471
           EL  ++  I ++I  EE +F +TL KGI+   +  +  + +    + G  AF L+DTYGF
Sbjct: 351 ELVAQQELIEKVIREEENAFLRTLDKGIKLLDRIIEKTKAEDFLTIPGNVAFELYDTYGF 410

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E+GL+V+   F   M+  +ERSRSA +        +D D          L
Sbjct: 411 PLDLTELILREKGLVVNRREFKAEMEAQKERSRSASS--------VDTDDWIE------L 456

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEV--GIVLASSSFYAEQGGQIFDEG 589
             DD  +F+ + D+  V   I         VV  N+    +V   + FY E GGQ+ D G
Sbjct: 457 IDDDVQEFVGY-DYTEVEVKITR----YRKVVTKNKTFYHLVFNITPFYGEGGGQVGDSG 511

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIG-SLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
            + G   +  + + +   G  IH+   + E      V +  I KVD  +R L A NH+ T
Sbjct: 512 VLIGEKETIRIIDTKKENGLTIHLAEKMPE-----DVTQTFIAKVDEHKRVLTANNHSAT 566

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+L++ALR+VLG HV+QKGS V  E LRFDFSH + V  E L  + +IVN  I+  + + 
Sbjct: 567 HLLDYALRKVLGKHVEQKGSYVSDEHLRFDFSHFQKVTDEELAEVAAIVNRLIRMNIPLE 626

Query: 709 SKEAT-LAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGT 767
              +  +A+A+ +  L A+FGE Y D VRV+  G                  S ELCGGT
Sbjct: 627 EHRSVPMAKAQAMGAL-AIFGEKYGDLVRVIKYGE-----------------SVELCGGT 668

Query: 768 HLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSL-- 825
           H+  T +   F +LSE  ++ G+RRI A+T   A +    + ++ +E++   K   +L  
Sbjct: 669 HVPATGQIGFFKILSESSVSAGVRRIEAITADKAEEYINNSFAIIREMEKMFKSNKNLME 728

Query: 826 -----LEKNQ-VRKAQKKVAEENLQ 844
                LE+N+ ++K  +K A+E+L+
Sbjct: 729 CVKNVLEENEGLKKETEKFAKESLR 753


>gi|126663290|ref|ZP_01734288.1| alanine--tRNA ligase (alanyl-tRNA synthetase) [Flavobacteria
           bacterium BAL38]
 gi|126624948|gb|EAZ95638.1| alanine--tRNA ligase (alanyl-tRNA synthetase) [Flavobacteria
           bacterium BAL38]
          Length = 878

 Score =  595 bits (1534), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 361/927 (38%), Positives = 522/927 (56%), Gaps = 79/927 (8%)

Query: 63  VRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRA 122
           +R  F +FFE   H+   S+P+V  +DPTL+F N+GM Q+K  FLG  +P     K  R 
Sbjct: 6   IRKQFLQFFESNGHLIVPSAPIVLKDDPTLMFNNSGMAQFKEYFLGNGNP-----KSPRI 60

Query: 123 CNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLP 182
            +TQKC+R  GKHNDL+DVG DTYHHT FEMLGNWSFGDYFK EAI WAW+LLT+VY++P
Sbjct: 61  ADTQKCLRVSGKHNDLEDVGFDTYHHTMFEMLGNWSFGDYFKKEAINWAWQLLTEVYKIP 120

Query: 183 ADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPCSEI 242
            + LY + F G+    +  D EA DIW + +   R++    KDNFWEMGD GPCGPCSEI
Sbjct: 121 KENLYVSVFEGNPDENVPFDQEAWDIWKELISEDRIILGNKKDNFWEMGDQGPCGPCSEI 180

Query: 243 HYD-RTGNRDA----ASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFE 297
           H D RT    A     SLVNND P  +EIWN VF++FNR++DGSL+ LPA+HVDTG+GFE
Sbjct: 181 HVDLRTEAEKALVSGKSLVNNDHPQVVEIWNNVFMEFNRKADGSLEKLPAQHVDTGMGFE 240

Query: 298 RLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVG--ADDADKVDMAYRVVADHIR 355
           RL   LQ K SNYDTDVF P+ + ++Q TG +  S +V   +++ +K ++A RV+ DH+R
Sbjct: 241 RLCMALQGKTSNYDTDVFTPLIEKVEQITGLKYTSNEVKNISEEQNKTNIAIRVIVDHVR 300

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPE 415
            ++FAIADG  P N G  YV+RRILRRA+RYG   L  ++ F N LV ++   MG+ FPE
Sbjct: 301 AVAFAIADGQLPSNTGAGYVIRRILRRAIRYGFTFLGTKEPFINKLVEVLANQMGEFFPE 360

Query: 416 LKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDL 475
           +K ++  +  +I  EEASF +TL +G++  +    +  GK +SG  AF L+DT+GFP+DL
Sbjct: 361 IKSQQQLVTNVIREEEASFLRTLEQGLQLLENVMAETSGKEVSGAKAFELYDTFGFPIDL 420

Query: 476 TQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDD 535
           T L+  E+G  +D  GFN AM E + RSR+A              +  +     VL   +
Sbjct: 421 TALILREKGYDLDEAGFNVAMQEQKARSRAA--------------SEVSTEDWNVLIPGN 466

Query: 536 SFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLF 595
              F+ +    + +K   T    ++S   G    IVL ++ FY E GGQ+ D+G +    
Sbjct: 467 VETFVGYDQTANEVK--ITRIRKVDSKKDGVLYQIVLDNTPFYPEGGGQVGDKGTLVSAN 524

Query: 596 GSFYVRNVQIYGGFVIHIG-SLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFA 654
            +  + + +     ++H    L E     ++    + KV+ D R   + NH+ TH+++ A
Sbjct: 525 ETIDIIDTKKENNLILHFAKQLPE-----NIEAGFVAKVNTDLRTSTSKNHSATHLMHLA 579

Query: 655 LREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATL 714
           LR +LG HV+QKGS+V P  LRFDFSH   V  + LR++E+ VN QI+A+L +       
Sbjct: 580 LRTILGTHVEQKGSLVNPNYLRFDFSHFSKVSDDELRQVEASVNAQIEAQLQLVEHRNIP 639

Query: 715 AEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTRE 774
            +     G  A+FGE Y D VR++  G                  S ELCGG H+ NT E
Sbjct: 640 IKEALDKGAMALFGEKYGDNVRMIEFGD-----------------SKELCGGIHVKNTAE 682

Query: 775 AEAFALLSEEGIAKGIRRITAVTTGLAYKAF----EAACSLEKEV----DDASKIEGSLL 826
              F ++SE  +A GIRRI A+ TG A K F    E   +  KEV     D  K   SL 
Sbjct: 683 IWHFKIISEGAVAAGIRRIEAI-TGDAVKDFYTSQENTLAEIKEVLKNPQDVLKSVASLQ 741

Query: 827 EKN-QVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKV 885
           + N +++K  +++ +E ++      +  A+    NG  F   +V++ +  ++ ++    +
Sbjct: 742 DDNAKLKKQVEQLVKEKIEGLKN--SLVADFQEVNGIHFLAKQVDLSM--SSTKDLAQAI 797

Query: 886 IEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAA--LQPLKGRCGKGKG 943
              K    +  ++ E     + C         SK+L   + L A   ++ L G+   G G
Sbjct: 798 GTSKPNAFVFLASIEDNAPNIHCY-------ISKELVAEKGLNAGNVIREL-GKLIDGNG 849

Query: 944 G----LASGQGTDAAQVTPAMDLAAEF 966
           G     ASG+G +   +  A++   +F
Sbjct: 850 GGQPFFASGKGKNVGGIKEALEKVVDF 876


>gi|319644298|ref|ZP_07998792.1| alanyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
 gi|345519672|ref|ZP_08799087.1| alanyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|317384193|gb|EFV65166.1| alanyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
 gi|345457115|gb|EET15910.2| alanyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
          Length = 871

 Score =  595 bits (1534), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 331/747 (44%), Positives = 434/747 (58%), Gaps = 61/747 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++RD+F  FFE K H    S+P+V  +DPTL+F NAGMNQ+K I LG        +K 
Sbjct: 3   AKEIRDSFKSFFESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGN-----HPAKY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWE L  V 
Sbjct: 58  KRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAIGWAWEYLVDVL 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           ++    LYAT F G  + GL  DNEA   W +FLP   +L     DNFWEMGDTGPCGPC
Sbjct: 118 KIDPKDLYATVFEGSPEEGLERDNEAASYWEQFLPKDHILNGNKHDNFWEMGDTGPCGPC 177

Query: 240 SEIHYDRTGNRDAA-----SLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + A      LVN D P  IEIWN+VF+QFNR++DGSL+ LPAK +DTG+
Sbjct: 178 SEIHIDSRSEEEKAQIPGNQLVNKDHPQVIEIWNLVFMQFNRKADGSLEGLPAKVIDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF PI  AI +  G        G D  ++ D+A RV+ADHI
Sbjct: 238 GFERLVRTLQGKTSNYDTDVFQPILKAIAEMAGT-----TYGQD--NQKDIAMRVIADHI 290

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++F+I DG  P N    YV+RRILRRAVRYG   L  +  F   L+ ++++ MG+ +P
Sbjct: 291 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLIENMGEAYP 350

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG---KVLSGQDAFILWDTYGF 471
           EL  ++  I ++I  EE SF +TL  GI    K   D +    K +SG DAF L+DT+GF
Sbjct: 351 ELNAQKTLIEKVIKEEEESFLRTLETGIRLLDKTMNDAKAAGKKEISGVDAFTLYDTFGF 410

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E G+ V+ E FN  M + +ER+R+A   + G  I +    T   H  G  
Sbjct: 411 PLDLTELILRENGMTVNEEEFNAEMQKQKERARNAAAVETGDWITIKEGDT---HFVGYD 467

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            T+     + ++  K   + +Y                IVL+ + FYAE GGQ+ D G I
Sbjct: 468 FTEYETSILRYRQIKQKNQTLYQ---------------IVLSDTPFYAESGGQVGDTGVI 512

Query: 592 EGLFGSFYVRNVQIYGGFVIHI-GSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHM 650
              F +  + + +      IHI   L E      +   ++  VD ++R   A NH+CTH+
Sbjct: 513 VSEFETIEIIDTKKENNLPIHITKKLPE-----HLDVPMMACVDTEKRAACAANHSCTHL 567

Query: 651 LNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSK 710
           L+ ALR+VLG HV+QKGS+V PE LRFDFSH + V  + LR +E +VN +I+  + +   
Sbjct: 568 LDEALRQVLGTHVEQKGSLVTPESLRFDFSHFQKVTDKQLREVEHLVNAKIRENIPLTEY 627

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
                E     G  A+FGE Y D VRVV  G                  S E CGGTH+ 
Sbjct: 628 RNLPIEKAKELGAIALFGEKYGDEVRVVQFGN-----------------SIEFCGGTHVP 670

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVT 797
            T +     ++SE  +A G+RRI A+T
Sbjct: 671 ATGKIGMVRIISESSVAAGVRRIEAIT 697


>gi|365101551|ref|ZP_09332181.1| alanyl-tRNA synthetase [Citrobacter freundii 4_7_47CFAA]
 gi|363647101|gb|EHL86330.1| alanyl-tRNA synthetase [Citrobacter freundii 4_7_47CFAA]
          Length = 875

 Score =  595 bits (1534), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 358/915 (39%), Positives = 514/915 (56%), Gaps = 89/915 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT    +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQYAWELLTGENWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAAYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSAEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNY+ D+F  + +++ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYEIDLFRSLIESVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A+D FF  LV  +V V
Sbjct: 283 VIADHIRSCAFLIADGVVPSNENRGYVLRRIIRRAVRHGN-MLGAKDTFFYKLVGPLVDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    ELK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEELKRQQAMVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A +   
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNAMIRVD 453

Query: 529 GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDE 588
           G       FK     +    + A++   + ++++  G +  +VL  + FYAE GGQ+ D+
Sbjct: 454 GA----SEFKGYEHLELNGKVTALFVDGKAVDAINAGQDAVVVLDQTPFYAESGGQVGDK 509

Query: 589 GFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
           G ++G   +F V + Q YG  + HIG L+  AG   +G+ V   VD  RR  I  NH+ T
Sbjct: 510 GELKGAGFAFAVSDTQKYGQAIGHIGKLS--AGSLKIGDAVQADVDEARRARIRLNHSAT 567

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+++ ALR+VLG HV QKGS+V  + LRFDFSH + + P  +R +E +VN QI+  L + 
Sbjct: 568 HLMHAALRQVLGTHVAQKGSLVNDKLLRFDFSHTEAMKPAEIRAVEDLVNAQIRRNLPIE 627

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
           +    L  AK   G  A+FGE Y D VRV+++G                  S ELCGGTH
Sbjct: 628 TNIMDLEAAKA-KGAMALFGEKYDDHVRVLSMG----------------DFSTELCGGTH 670

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEG----- 823
            S T +   F ++SE G A G+RRI AVT   A +   A    ++  D A  ++G     
Sbjct: 671 ASRTGDIGLFRIVSESGTAAGVRRIEAVTGEGAIQTVHAES--DRLSDIAQLLKGDSQNI 728

Query: 824 -----SLLEKNQVRKAQKKVAEENLQKAVK-VATETAEAAASNGKPFCISRVEVGLDAAA 877
                S+LE+   R+ +K++ +   Q A +  A  +++A   NG    +S +   ++   
Sbjct: 729 GDKVRSVLER--TRQLEKELQQLKEQAAAQESANLSSKAVDINGVKLLVSEL-ADVEPKM 785

Query: 878 VREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGR 937
           +R  V  +  Q G  V+V +T     K  + AGV +  D + +++  E +    Q + G+
Sbjct: 786 LRTMVDDLKNQLGSTVIVLAT-VVEGKVSLIAGVSK--DVTDRVKAGELVGMVAQQVGGK 842

Query: 938 CGKGKGGLASGQGTD 952
            G G+  +A   GTD
Sbjct: 843 GG-GRPDMAQAGGTD 856


>gi|422909067|ref|ZP_16943719.1| alanyl-tRNA synthetase [Vibrio cholerae HE-09]
 gi|341636149|gb|EGS60852.1| alanyl-tRNA synthetase [Vibrio cholerae HE-09]
          Length = 860

 Score =  595 bits (1534), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 360/922 (39%), Positives = 514/922 (55%), Gaps = 80/922 (8%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR  F  FFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI++AWE LT V +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           P +RL  T +          D+EA DIW K   +PA R++  G K        DNFW+MG
Sbjct: 122 PKERLLVTVY--------ETDDEAFDIWNKKIGIPADRIIRIGDKKGGKKFDSDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKH 289
           DTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG+++PLP   
Sbjct: 174 DTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPS 233

Query: 290 VDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRV 349
           VDTG+G ER+++I+Q   SNY+ DVF  +  A   A G +           D  + + RV
Sbjct: 234 VDTGMGIERISAIMQGVHSNYEIDVFQTLIKAAADAIGYQ-----------DLNNQSLRV 282

Query: 350 VADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVM 409
           VADHIR+ +F I DG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF+ LV  + +VM
Sbjct: 283 VADHIRSCAFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGAFFHKLVGPLAEVM 341

Query: 410 GDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTY 469
           G    ELK+++A + +++  EE +FG+TL +G+     A   + G+VL G+  F L+DTY
Sbjct: 342 GTAGVELKKQQALVEKVLRIEEENFGRTLDRGMSILNDALDQLSGQVLDGETVFKLYDTY 401

Query: 470 GFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRG 529
           GFP DLT  +A ERG  +D  GF  AM+E R+R+R A      G    D ++        
Sbjct: 402 GFPADLTNDVARERGFSIDEAGFEQAMEEQRQRAREA------GQFGTDYNSLIK----- 450

Query: 530 VLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEG 589
             AT+  F        +SV++ ++     + ++  G++  IVL ++ FYAE GGQ  D G
Sbjct: 451 -SATNTEFCGYTASRGQSVVREMFVEGAEVSALSAGDKAIIVLDNTPFYAESGGQCGDTG 509

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
            ++   G F+V + Q  G  + H G L +G    + G++V   VD  RR  I+ NH+ TH
Sbjct: 510 VLKTDAGIFHVEDTQKLGNAIAHHGVLAQGV--LATGDQVDAIVDEKRRAAISLNHSATH 567

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +L+ ALR+VLG+HV QKGS+V  E LRFDFSH + + P  ++ +E +VN++I+   D+ +
Sbjct: 568 LLHAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTPAEIKEVERLVNQEIRHNHDIET 627

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
               + EAK   G  A+FGE Y D VRV+++G                  S ELCGG H 
Sbjct: 628 NIMNIDEAKA-KGAMALFGEKYDDQVRVLSMG----------------DFSTELCGGIHA 670

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKN 829
           SNT +   F ++SE GIA GIRRI AVT   A    +A  +           +  LLEK 
Sbjct: 671 SNTGDIGLFKIISEGGIAAGIRRIEAVTGEGALDYLDAQQAQHDAKVSEMAAKAKLLEK- 729

Query: 830 QVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQK 889
           ++++ + K+A +     +    + A      G    ++ +  G D  A+R  V  +  Q 
Sbjct: 730 EIQQLKDKLAAKESAGLINQVKQIA------GVNVLVAHLN-GADNKALRGMVDDLKNQL 782

Query: 890 GMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQ 949
              +++   +    K  + AGV   +D + +++  E +      + G+ G G+  +A   
Sbjct: 783 SSGIIMLG-NVAEGKVGLIAGVT--NDLTNKVKAGELVNMVALQVGGK-GGGRPDMAQAG 838

Query: 950 GTDAAQVTPAMDLAAEFAAMKL 971
           GTDA  +  A++    + A +L
Sbjct: 839 GTDAHALPSALESVDAWIAERL 860


>gi|452748671|ref|ZP_21948449.1| alanyl-tRNA ligase [Pseudomonas stutzeri NF13]
 gi|452007577|gb|EMD99831.1| alanyl-tRNA ligase [Pseudomonas stutzeri NF13]
          Length = 874

 Score =  595 bits (1534), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 373/940 (39%), Positives = 524/940 (55%), Gaps = 96/940 (10%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F +FFE+K H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLRFFEEKGHTRVASSSLIPANDPTLLFTNAGMNQFKDCFLGL-----EKRAY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           TRA  +QKC+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT  K
Sbjct: 58  TRATTSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAITYAWEFLTSEK 117

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFW 228
              LP ++L+ T +        A D+EA DIW K   +PA R++  G         DNFW
Sbjct: 118 WLNLPKEKLWVTVY--------ASDDEAYDIWTKEVGVPAERMVRIGDNKGAPYASDNFW 169

Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
            MGDTGPCGPC+EI +D   +           D    IEIWN VF+QFNR +DG + PLP
Sbjct: 170 AMGDTGPCGPCTEIFFDHGEHVWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVMHPLP 229

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
           A  VDTG+G ER++++LQ+  SNY+ D+F  + +A   A G            A++   +
Sbjct: 230 APSVDTGMGLERVSAVLQHVNSNYEIDLFQSLLNAAADAIGC-----------ANEGQAS 278

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            +VVADHIR+  F IADG  P NEGR YVLRRI+RRA R+G++ L A+  FF+ +V  +V
Sbjct: 279 LKVVADHIRSCGFLIADGVTPSNEGRGYVLRRIVRRACRHGNK-LGAKGSFFHRIVAALV 337

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
             MGD FPELKQ++AHI  ++ +EE  F KTL +G++  ++    + G V+ G   F L+
Sbjct: 338 AEMGDAFPELKQQQAHIERVLKSEEEQFAKTLEQGLKILEQDLAGLTGSVIPGDVVFKLY 397

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFP+DLT  +A ER L +D EGF   M   RER+RSA       A  MD ++     
Sbjct: 398 DTYGFPVDLTGDIARERNLTLDEEGFEREMQAQRERARSAS------AFGMDYNS----- 446

Query: 527 KRGVLATDDSFKFIWFQDHKSVIK--AIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
              ++  +   +F+ +Q      K  A++     ++S+  G E  +VL  + FYAE GGQ
Sbjct: 447 ---LVKVEGETRFLGYQGTSGAGKVLALFKEGMVVDSLSAGEEGVVVLDQTPFYAESGGQ 503

Query: 585 IFDEGFI--EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIA 642
           + D G++  EGL   F VR+    G   +H G +  G  R  VG +V   VD   R+  A
Sbjct: 504 VGDCGYLAAEGL--RFDVRDTSKAGSAFLHHGIVDSGTLR--VGADVEATVDASVRQATA 559

Query: 643 PNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIK 702
            NH+ TH+L+ ALRE+LG+HV QKGS+V  ++LRFDFSH + + PE LR +E  VN +I+
Sbjct: 560 LNHSATHLLHAALREILGEHVSQKGSLVDSQRLRFDFSHFEAIKPEQLRALEDRVNAEIR 619

Query: 703 AELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAE 762
               V  +E  +  AK   G  A+FGE Y D VRV+ +G                  S E
Sbjct: 620 RNSAVEIEETDIDTAKA-KGAMALFGEKYGDSVRVLTMGG---------------GFSVE 663

Query: 763 LCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIE 822
           LCGGTH++ T +   F + SE G+A G+RRI AVT   A     AA    KE   A+ ++
Sbjct: 664 LCGGTHVNRTGDIGLFKITSEGGVAAGVRRIEAVTGAPALAYLNAAEEQLKEA--ANLVK 721

Query: 823 GSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEV----------- 871
           GS   ++ +      + E N Q   ++    A+AA++ G     S ++V           
Sbjct: 722 GS---RDNLLDKLGGILERNRQLEKELEQLKAKAASAAGNDLATSALDVKGVRVLAARQD 778

Query: 872 GLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAAL 931
           GLD  A+   V ++  + G  V++       +K V+ AGV +  D + +L+  E L    
Sbjct: 779 GLDGKALLALVDQLKNKLGSAVILLG-GVLDDKVVLVAGVTQ--DLTARLKAGE-LMKQA 834

Query: 932 QPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
               G  G G+  +A G G++ A++  A+ LA  F    L
Sbjct: 835 AAAVGGKGGGRPDMAQGGGSEPAKLDDALALAVSFVEQGL 874


>gi|424661875|ref|ZP_18098912.1| alanyl-tRNA synthetase [Bacteroides fragilis HMW 616]
 gi|404578186|gb|EKA82921.1| alanyl-tRNA synthetase [Bacteroides fragilis HMW 616]
          Length = 872

 Score =  595 bits (1534), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 331/747 (44%), Positives = 444/747 (59%), Gaps = 61/747 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A + RD+F  FFE K H    S+P+V  +DPTL+F NAGMNQ+K I LG        +K 
Sbjct: 4   AKETRDSFKNFFESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGN-----HPAKY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWE L  V 
Sbjct: 59  HRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAWEYLVDVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +L  + LYAT F G  + GL  DNEA  IW +FLP   ++     DNFWEMGDTGPCGPC
Sbjct: 119 KLNPEHLYATVFEGSPEEGLERDNEAASIWEQFLPKDHIINGNKHDNFWEMGDTGPCGPC 178

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + A      LVN+D P  IEIWN+VF+Q+NR++D +L+PLPAK +DTG+
Sbjct: 179 SEIHIDLRPAEERAKISGRDLVNHDHPQVIEIWNLVFMQYNRKADSTLEPLPAKVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF P+  AI Q  G      + G ++ +  D+A RV+ADHI
Sbjct: 239 GFERLCMALQGKTSNYDTDVFQPLIKAIAQMAGT-----EYGKNEQN--DIAMRVIADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++F+I DG  P N    YV+RRILRRAVRYG   L  +  F   L+ +++  MGD +P
Sbjct: 292 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLIDSMGDAYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ--GKV-LSGQDAFILWDTYGF 471
           EL  ++  I ++I  EE SF +TL  GI    K   D +  GK  +SG+DAF L+DT+GF
Sbjct: 352 ELIAQKELIEKVIKEEEESFLRTLETGIRLLDKTMADTKANGKTEISGKDAFTLYDTFGF 411

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E G+ V++E F+  M + ++R+R+A   + G  I++    T  +   G  
Sbjct: 412 PLDLTELILRENGMTVNVEEFDAEMQQQKQRARNAAAIETGDWIILKEGTTEFV---GYD 468

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            T+     + ++  K   + +Y                IVL  + FYAE GGQ+ D G +
Sbjct: 469 YTEYETSILRYRQVKQKNQTLYQ---------------IVLDYTPFYAESGGQVGDTGVL 513

Query: 592 EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHML 651
              F +  V + +      IHI   T+          + C VD D+R   A NH+ TH+L
Sbjct: 514 VNEFETIEVIDTKKENNLPIHI---TKKLPEHPEAPMMAC-VDTDKRAACAANHSATHLL 569

Query: 652 NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS-K 710
           + ALREVLG+HV+QKGS+V P+ LRFDFSH + V  E LR++E +VN +I+A + +   +
Sbjct: 570 DEALREVLGEHVEQKGSLVTPDSLRFDFSHFQKVTDEELRKVEHLVNAKIRANVPLQEHR 629

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
              + EAK + G  A+FGE Y D VRV+  G                  S E CGGTH++
Sbjct: 630 NIPIEEAKEL-GAIALFGEKYGDHVRVIQFGS-----------------SIEFCGGTHVA 671

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVT 797
            T       ++SE  +A G+RRI A T
Sbjct: 672 ATGNIGMVKIISESSVAAGVRRIEAYT 698


>gi|426411063|ref|YP_007031162.1| alanyl-tRNA synthetase [Pseudomonas sp. UW4]
 gi|426269280|gb|AFY21357.1| alanyl-tRNA synthetase [Pseudomonas sp. UW4]
          Length = 873

 Score =  595 bits (1533), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 361/895 (40%), Positives = 504/895 (56%), Gaps = 94/895 (10%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F +FFE++ H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLRFFEEQGHTRVASSSLIPGNDPTLLFTNAGMNQFKDCFLGQ-----EKRAY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           TRA ++QKC+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AW  LT  K
Sbjct: 58  TRAVSSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAISYAWNFLTSDK 117

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFW 228
              LP ++L+ T +        A D+EA DIW K +  PA R++  G         DNFW
Sbjct: 118 WLNLPKEKLWVTVY--------ASDDEAYDIWTKEIGVPAERMVRIGDNKGAPYASDNFW 169

Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
            MGDTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG L PLP
Sbjct: 170 TMGDTGPCGPCTEIFYDHGADIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLP 229

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
           A  VDTG+G ER++++LQ+  SNY+ D+F  +  A  +A G             +    +
Sbjct: 230 APSVDTGMGLERISAVLQHVHSNYEIDLFQSLLSASAKAIGC-----------TNDAQAS 278

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            +VVADHIR+  F IADG  P NEGR YVLRRI+RRA R+G++ L A+  FF  +V  +V
Sbjct: 279 LKVVADHIRSCGFLIADGVLPSNEGRGYVLRRIIRRACRHGNK-LGAKGSFFYQIVAALV 337

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
             MG+ FPELK ++AHI  ++ AEE  F KTL +G++  ++   +++G V+ G   F L+
Sbjct: 338 AEMGEAFPELKSQQAHIERVLKAEEEQFAKTLEQGLKILEQDLAELKGDVVPGDVVFKLY 397

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFP+DLT  +A ER L +D EGF   M+  R R+RSA       +  MD ++     
Sbjct: 398 DTYGFPMDLTGDIARERSLTIDEEGFEREMEAQRVRARSAS------SFGMDYNS----- 446

Query: 527 KRGVLATDDSFKFIWFQDHKSVIK--AIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
              ++  D   +F  +  H    K  A+Y   + ++ +  G E  IVL  + FYAE GGQ
Sbjct: 447 ---LVKVDVDTEFTGYTAHSGSAKIVALYKDGQSVDVLSEGEEGVIVLDQTPFYAESGGQ 503

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           I D GF++     F VR+    GG  +H G L  G+    VG  V   VD + R   + N
Sbjct: 504 IGDCGFLQAGAARFDVRDTTKTGGAFLHHGVLDSGS--LIVGTPVETHVDAEVRHATSLN 561

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ ALR+VLGDHV QKGS+V  ++LRFDFSH + + PE L+ +E IVN +I+  
Sbjct: 562 HSATHLLHAALRQVLGDHVQQKGSLVDSQRLRFDFSHFEAIKPEQLKALEEIVNAEIRKN 621

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
            +V ++E  +  AK   G  A+FGE Y D VRV+++G                  S ELC
Sbjct: 622 SEVETEETDIETAKQ-KGAMALFGEKYGDSVRVLSMG----------------DFSVELC 664

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGS 824
           GG H + T +     ++SE G+A G+RRI AVT   A     AA    KE   AS ++GS
Sbjct: 665 GGIHANRTGDIGLLKIISEGGVASGVRRIEAVTGAQALAYLNAAEEQLKEA--ASLVKGS 722

Query: 825 ----------LLEKNQVRKAQKKVAEENLQ-KAVKVATETAEAAASNGKPFCISRVEV-G 872
                     +LE+N++ + Q     E LQ KA   A +   A A + K   +  V + G
Sbjct: 723 RDNLIDKLSAVLERNRLLEKQL----EQLQAKAASAAGDDLSAQAQDVKGVKVLAVRLDG 778

Query: 873 LDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWL 927
            D  A+   V ++  + G  V++  +     K V+ AGV +  D + QL+  + +
Sbjct: 779 QDGKALLALVDQLKNKLGRAVILLGSVH-EEKVVLVAGVTK--DLTGQLKAGDLM 830


>gi|365540861|ref|ZP_09366036.1| alanyl-tRNA synthetase [Vibrio ordalii ATCC 33509]
          Length = 860

 Score =  595 bits (1533), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 364/910 (40%), Positives = 501/910 (55%), Gaps = 94/910 (10%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR  F  FFE K H    SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRRAFLSFFESKGHQIVDSSSLVPANDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT   +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIAYAWEFLTVTLKL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           PADRL  T +          D+EA DIW K   +PA R++  G K        DNFW+MG
Sbjct: 122 PADRLLVTVY--------ETDDEAFDIWNKKVGIPAERIIRIGDKPGGKAYESDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKH 289
           DTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG ++PLP   
Sbjct: 174 DTGPCGPCTEIFYDHGDHIWGGPPGSAEEDGDRFIEIWNNVFMQFNRHADGKMEPLPKPS 233

Query: 290 VDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRV 349
           VDTG+G ER+++I+Q   SNY+ DVF  +  A    TG    S           + + RV
Sbjct: 234 VDTGMGIERISAIMQGVHSNYEIDVFQALIKAAADVTGYDDLS-----------NQSLRV 282

Query: 350 VADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVM 409
           VADHIR+ +F I DG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF+ LV  + +VM
Sbjct: 283 VADHIRSCAFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGAFFHKLVGPLAQVM 341

Query: 410 GDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTY 469
           G    ELK+++A + +++  EE +FG+TL +G+     A  +++G VL G+  F L+DTY
Sbjct: 342 GTAGEELKKQQALVEKVLRIEEENFGRTLERGMAILNDALDNLEGSVLDGETVFKLYDTY 401

Query: 470 GFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRG 529
           GFP DLT  +A ER L +D +GF  AM+E R+R+R A      G    D +A        
Sbjct: 402 GFPADLTNDVARERELTIDEQGFEKAMEEQRQRAREA------GQFGTDYNA-------- 447

Query: 530 VLATDDSFKFIWFQ--DHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFD 587
           ++  D +  F  +     +S I A++     ++++  G++  ++L  + FYAE GGQ  D
Sbjct: 448 IIKVDTNTAFCGYSATQGESRIAAMFVDGNEVDTLSAGDKAILILGETPFYAESGGQCGD 507

Query: 588 EGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTC 647
            G I+   G F V + Q  G  + H G L EG    + G+E    VD  RR  I+ NH+ 
Sbjct: 508 AGVIQTATGLFKVADTQKLGNAIAHHGELIEGV--LAKGDEAKAIVDAKRRAAISLNHSA 565

Query: 648 THMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDV 707
           TH+L+ ALR+VLG HV QKGS+V  E LRFDFSH + + P  L+ +E +VN QI+    +
Sbjct: 566 THLLHAALRQVLGSHVAQKGSLVKAESLRFDFSHLEAMTPAELKEVERLVNAQIRRNHTI 625

Query: 708 FSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGT 767
            +    +  AK   G  A+FGE Y D VRV+++G                  S ELCGG 
Sbjct: 626 ETNIMDIEAAKA-KGAMALFGEKYDDEVRVLSMG----------------DFSTELCGGI 668

Query: 768 HLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLE 827
           H SNT +   F ++SE GIA GIRRI AVT              E  +D   + +     
Sbjct: 669 HASNTGDIGLFKIVSEGGIAAGIRRIEAVTG-------------EGALDLLDQQQAQYEV 715

Query: 828 KNQVRKAQKKVAEENLQKAV-KVATETAEAAASNGKPFCISRVEV----GLDAAAVREAV 882
           K     A+ K  E+ LQ+   K+A + +    SN K     +V V    G D  A+R  V
Sbjct: 716 KVAEMAAKAKSLEKELQQLKDKLAAKESANLISNVKEIAGVKVLVAQLNGADNKALRGMV 775

Query: 883 LKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGK 942
            ++  Q G  +++   +   +K  + AGV +  D + +++  E +      + G+ G G+
Sbjct: 776 DELKNQLGSGIIMLG-NVADDKVALIAGVTK--DLTAKVKAGELVNMVALQVGGK-GGGR 831

Query: 943 GGLASGQGTD 952
             +A   GTD
Sbjct: 832 PDMAQAGGTD 841


>gi|262164028|ref|ZP_06031767.1| alanyl-tRNA synthetase [Vibrio mimicus VM223]
 gi|262027556|gb|EEY46222.1| alanyl-tRNA synthetase [Vibrio mimicus VM223]
          Length = 860

 Score =  594 bits (1532), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 367/924 (39%), Positives = 519/924 (56%), Gaps = 84/924 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR  F  FFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI++AWE LT V +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTGVLQL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           P +RL  T +          D+EA DIW K   +PA R++  G K        DNFW+MG
Sbjct: 122 PKERLLVTVY--------ETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKH 289
           DTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG+++PLP   
Sbjct: 174 DTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPS 233

Query: 290 VDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRV 349
           VDTG+G ER+++I+Q   SNY+ DVF  +  A   A G +           D  + + RV
Sbjct: 234 VDTGMGIERISAIMQGVHSNYEIDVFQTLIKAAADAIGYQ-----------DLTNQSLRV 282

Query: 350 VADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVM 409
           VADHIR+ +F I DG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF+ LV  + +VM
Sbjct: 283 VADHIRSCAFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGAFFHKLVGPLAEVM 341

Query: 410 GDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTY 469
           G    ELK+++A + +++  EE +FG+TL +G+    +A   + G+VL G+  F L+DTY
Sbjct: 342 GTAGVELKKQQALVEKVLRIEEENFGRTLDRGMSILNEALDQLSGQVLDGETVFKLYDTY 401

Query: 470 GFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRG 529
           GFP DLT  +A ERG  +D  GF  AM+E R+R+R A      G    D +   +L K  
Sbjct: 402 GFPADLTNDVARERGFSIDETGFEQAMEEQRQRAREA------GQFGTDYN---SLIKS- 451

Query: 530 VLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEG 589
             AT+  F        +SV++ I+     + ++  G++  IVL ++ FYAE GGQ  D G
Sbjct: 452 --ATNTEFCGYTASRGQSVVREIFVEGAEVSALSAGDKAIIVLDNTPFYAESGGQCGDTG 509

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
            ++   G F+V +    G  + H G L +G    + G++V   VD  RR  I+ NH+ TH
Sbjct: 510 VLKTEAGVFHVEDTHKLGNAIAHHGVLAQGV--LAKGDQVDAIVDEQRRAAISLNHSATH 567

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +L+ ALR+VLG+HV QKGS+V  E LRFDFSH + +    ++ +E +VN++I+    + +
Sbjct: 568 LLHAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTATEIKEVERLVNQEIRRNHSIET 627

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
               + EAK   G  A+FGE Y D VRV+++G                  S ELCGG H 
Sbjct: 628 NIMNIDEAKA-KGAMALFGEKYDDQVRVLSMG----------------DFSTELCGGIHA 670

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVT--TGLAYKAFEAACSLEKEVDDASKIEGSLLE 827
           SNT +   F + SE GIA GIRRI AVT    L Y   + A    K V+ A+K    LLE
Sbjct: 671 SNTGDIGLFKITSEGGIAAGIRRIEAVTGEGALDYIEAQQAQHDAKVVEMAAK--AKLLE 728

Query: 828 KNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIE 887
           K ++++ + K+A +     +    + A      G    ++ +  G D  A+R  V  +  
Sbjct: 729 K-EIQQLKDKLAAKESAGLINQVKQIA------GVNVLVAELN-GADNKALRGMVDDLKN 780

Query: 888 QKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLAS 947
           Q G  +++   +    K  + AGV   SD + +++  E +      + G+ G G+  +A 
Sbjct: 781 QLGSGIIMLG-NVAEGKVGLIAGVT--SDLTNKVKAGELVNMVALQVGGK-GGGRPDMAQ 836

Query: 948 GQGTDAAQVTPAMDLAAEFAAMKL 971
             GTDA  +  A++    + A +L
Sbjct: 837 AGGTDAHALPSALESVDAWIAERL 860


>gi|262401750|ref|ZP_06078316.1| alanyl-tRNA synthetase [Vibrio sp. RC586]
 gi|262352167|gb|EEZ01297.1| alanyl-tRNA synthetase [Vibrio sp. RC586]
          Length = 860

 Score =  594 bits (1532), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 366/927 (39%), Positives = 515/927 (55%), Gaps = 90/927 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR  F  FFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI++AWE LT V +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           P +RL  T +          D+EA DIW K   +PA R++  G K        DNFW+MG
Sbjct: 122 PKERLLVTVY--------ETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKH 289
           DTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG+++PLP   
Sbjct: 174 DTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPS 233

Query: 290 VDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRV 349
           VDTG+G ER+++I+Q   SNY+ DVF  +  A  +A G +           D  + + RV
Sbjct: 234 VDTGMGIERISAIMQGVHSNYEIDVFQTLIKAAAEAIGYQ-----------DLTNQSLRV 282

Query: 350 VADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVM 409
           VADHIR+ +F I DG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF+ LV  + +VM
Sbjct: 283 VADHIRSCAFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGAFFHKLVGPLAEVM 341

Query: 410 GDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTY 469
           G    ELK+++A + +++  EE +FG+TL +G+     A   + G+VL G+  F L+DTY
Sbjct: 342 GTAGAELKKQQALVEKVLRIEEENFGRTLDRGMSILNDALDQLSGQVLDGETVFKLYDTY 401

Query: 470 GFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRG 529
           GFP DLT  +A ERG  +D  GF  AM+E R+R+R A      G    D ++        
Sbjct: 402 GFPADLTNDVARERGFSIDEAGFEKAMEEQRQRAREA------GQFGTDYNSLIK----- 450

Query: 530 VLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEG 589
             AT+  F        +SV++ ++     + ++  G++  IVL ++ FYAE GGQ  D G
Sbjct: 451 -SATNTEFCGYTASRGQSVVREMFVEGAEVSALSAGDKAIIVLDNTPFYAESGGQCGDTG 509

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
            ++   G F+V +    G  + H G L +G    + G++V   VD  RR  I+ NH+ TH
Sbjct: 510 VLKTEAGIFHVEDTHKLGNAIAHHGVLAQGV--LAKGDQVDAIVDEQRRAAISLNHSATH 567

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +L+ ALR+VLG+HV QKGS+V  E LRFDFSH + +    ++ +E +VN++I+    + +
Sbjct: 568 LLHAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTAAEIKEVERLVNQEIRRNHHIET 627

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
               + EAK   G  A+FGE Y D VRV++IG                  S ELCGG H 
Sbjct: 628 NIMNIDEAKA-KGAMALFGEKYDDQVRVLSIG----------------DFSTELCGGIHA 670

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVT--TGLAYKAFEAACSLEKEVDDASKIEGSLLE 827
           SNT +   F ++SE GIA GIRRI AVT    L Y   + A    K V+ A+K    LLE
Sbjct: 671 SNTGDIGLFKIISEGGIAAGIRRIEAVTGEGALDYIEAQQAQHDAKVVEMAAK--AKLLE 728

Query: 828 KNQVRKAQKKVAEEN---LQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLK 884
           K   +   K  A+E+   + +  ++A      A  NG            D  A+R  V  
Sbjct: 729 KEIQQLKDKLAAKESAGLINQVKQIAGVNVLVAGLNGA-----------DNKALRGMVDD 777

Query: 885 VIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGG 944
           +  Q G  +++   +    K  + AGV   +D + +++  E +      + G+ G G+  
Sbjct: 778 LKNQLGSGIIMLG-NVADGKVGLIAGVT--NDLTSKVKAGELVNMVALQVGGK-GGGRPD 833

Query: 945 LASGQGTDAAQVTPAMDLAAEFAAMKL 971
           +A   GTDA  +  A++    + A +L
Sbjct: 834 MAQAGGTDAQALPSALESVDAWIAERL 860


>gi|359780118|ref|ZP_09283344.1| alanyl-tRNA synthetase [Pseudomonas psychrotolerans L19]
 gi|359371430|gb|EHK71995.1| alanyl-tRNA synthetase [Pseudomonas psychrotolerans L19]
          Length = 874

 Score =  594 bits (1532), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 370/923 (40%), Positives = 531/923 (57%), Gaps = 92/923 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F +FFE+K H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLRFFEEKGHTRVASSSLIPANDPTLLFTNAGMNQFKDCFLGM-----EKRSY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           TRA  +QKC+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT  +
Sbjct: 58  TRAATSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAITFAWEFLTSPQ 117

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFW 228
              LP ++L+ T +        A D+EA DIW K   +P ++++  G         DNFW
Sbjct: 118 WLGLPREKLWVTVY--------ATDDEAYDIWTKEVGVPEAQMVRIGDNKGAPYASDNFW 169

Query: 229 EMGDTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKP 284
            MGDTGPCGPC+EI +D      G    +     D    IEIWN VF+QFNR +DG L P
Sbjct: 170 TMGDTGPCGPCTEIFFDHGPEIWGGPPGSP--EEDGDRYIEIWNNVFMQFNRTADGVLHP 227

Query: 285 LPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVD 344
           LPA  VDTG+G ER++++LQ+  SNY+ D+F  +  A   A G          DDA  + 
Sbjct: 228 LPAPSVDTGMGLERVSAVLQHVHSNYEIDLFQQLLAASAAAIGC-------ANDDAPSL- 279

Query: 345 MAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNI 404
              +VVADHIR+ SF IADG  P NEGR YVLRRI+RRA R+G++ L A+  FF+ +V  
Sbjct: 280 ---KVVADHIRSCSFLIADGVLPSNEGRGYVLRRIIRRACRHGNK-LGAKGTFFHKIVAA 335

Query: 405 VVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFI 464
           +V  MG  +PEL Q++AHI  ++  EE  F KTL +G++  ++    +QG  + G   F 
Sbjct: 336 LVAEMGQAYPELVQQQAHIERVLRTEEEQFAKTLEQGLKILEQDLAQLQGDTIPGDVVFK 395

Query: 465 LWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAA 524
           L+DTYGFP+DLT  +A ER L +D  GF   M+  RER+RSA       A  +D ++   
Sbjct: 396 LYDTYGFPVDLTNDIARERNLNLDEAGFEREMEAQRERARSAS------AFGVDYNS--- 446

Query: 525 LHKRGVLATDDSFKFIWFQDHKS--VIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQG 582
                ++  +   +F+ +    +   I A+Y   + ++S+  G E  ++L  + FY E G
Sbjct: 447 -----LVKVEGETRFLGYDTTSASGTIVALYRAGQPVDSLAEGEEGVVILDQTPFYGESG 501

Query: 583 GQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIA 642
           GQ+ D G +E     F VR+     G  +H G +T+G+   +VG  ++ +VD  RR+ IA
Sbjct: 502 GQVGDTGTLESAGVGFAVRDTTKTQGAFLHHGVVTKGS--LNVGTALMAQVDAGRRQGIA 559

Query: 643 PNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIK 702
            NH+ TH+L+ ALR+VLGDHV QKGS+V  ++LRFDFSH + + PE L+RIE+IVNE+I+
Sbjct: 560 LNHSGTHLLHAALRQVLGDHVHQKGSLVNDQRLRFDFSHFEAIKPEELKRIETIVNEEIR 619

Query: 703 AELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAE 762
               V ++   + EAK   G  A+FGE Y D VRVV +G +                S E
Sbjct: 620 KNSAVTTEVMAIDEAKA-RGAMALFGEKYGDVVRVVGMGGE---------------FSVE 663

Query: 763 LCGGTHLSNTREAEAFALLSEEGIAKGIRRITAV--TTGLAY------KAFEAACSLEKE 814
           LCGGTH++ T +     L+SE G+A G+RR+ A+  T  LAY      +  EAA  L+  
Sbjct: 664 LCGGTHVAQTGDIGLLKLVSEGGVASGVRRVEAITGTAALAYLNGAEEQLREAASLLKGS 723

Query: 815 VDDASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAAS-NGKPFCISRVEVGL 873
            D+      +L+E+N  R+ +K+V +   + A   A +  + A    G     +R++ GL
Sbjct: 724 RDNVLDKLAALVERN--RQLEKEVEQLKAKAASASAGDLVDQAQDVKGAKVLTARLD-GL 780

Query: 874 DAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQP 933
           D  A+  A++  ++ K    M+    E   K V+ AGV   +D + +++  E L      
Sbjct: 781 DGKALL-ALVDQLKNKLGSGMILLGGEADGKVVLVAGV--TADLTARVKAGE-LMKRAAA 836

Query: 934 LKGRCGKGKGGLASGQGTDAAQV 956
           + G  G G+  +A G GTDA+Q+
Sbjct: 837 VVGGKGGGRPDMAQGGGTDASQL 859


>gi|294672801|ref|YP_003573417.1| alanine--tRNA ligase [Prevotella ruminicola 23]
 gi|294472795|gb|ADE82184.1| alanine--tRNA ligase [Prevotella ruminicola 23]
          Length = 887

 Score =  594 bits (1532), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 365/935 (39%), Positives = 516/935 (55%), Gaps = 76/935 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++RD+F KFFE K H    S+P+V  +DPTL+F NAGMNQ+K I LGT DP  +    
Sbjct: 3   ANEIRDSFKKFFESKQHAIVPSAPMVIKDDPTLMFTNAGMNQWKDIILGTRDPEPR---- 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  +TQKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK  AI+ AWE L  V 
Sbjct: 59  -RRADTQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKEGAIDMAWEYLVDVL 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +L  + LY T F G  +  +  D+EA   W K +P   ++     DNFWEMGDTGPCGPC
Sbjct: 118 KLNPEDLYVTVFEGSPEENIPRDDEAAKYWAKHVPEDHIINGNKHDNFWEMGDTGPCGPC 177

Query: 240 SEIHYD-RTGNRDAAS------LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDT 292
           SEIH D RT  + AAS      LVN DDP  IEIWNIVF+QFNR++DGSL+PL    +DT
Sbjct: 178 SEIHVDSRTPEQKAASGKTGRELVNQDDPQVIEIWNIVFMQFNRKADGSLEPLSMNVIDT 237

Query: 293 GLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGAD-----DADKVDMAY 347
           G+GFERL  ++Q K SNYDTDVF PI  A QQ TG + ++ +   +     + D +++A 
Sbjct: 238 GMGFERLVRMMQGKHSNYDTDVFQPIIKAEQQITGLKYFTFEEETESPISKEQDDINVAM 297

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RV ADH+R ++F+IADG  P N    YV+RRILRRAVRY    L  +DGF   LV  +V 
Sbjct: 298 RVCADHLRAVAFSIADGQLPSNAKAGYVIRRILRRAVRYAYTFLNQKDGFLYKLVPTLVA 357

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV--QGKV-LSGQDAFI 464
            MG  FPEL+ ++  + ++I  EE SF +TL KGI     A   +  +GK  L G  AF 
Sbjct: 358 EMGGAFPELEAQQQLVTKVIKEEEESFLRTLEKGIGMLNDAMNTLKAEGKTELDGVQAFR 417

Query: 465 LWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDAD---- 520
           L+DTYGFPLDLT+L+  E G  V+ E FN  M + ++R+R+A       A V ++D    
Sbjct: 418 LFDTYGFPLDLTELICRENGFTVNEEQFNVEMQKQKDRARNA-------AAVENSDWVEL 470

Query: 521 ATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAE 580
           A       G   T+     I ++      K     +EF E         +VL ++ FY E
Sbjct: 471 AAGEQQFVGYDYTEYECHIIRYR------KVTQKKNEFYE---------LVLDNTPFYGE 515

Query: 581 QGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKL 640
            GGQ+ D G +     +  + + +   G  +HI    +   +    + + C VD D+R  
Sbjct: 516 MGGQVGDCGVLVNEAETINIIDTKRENGQSVHI---VKQLPKDPAAQFMAC-VDTDKRNA 571

Query: 641 IAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQ 700
            A NHT TH+L++AL+++LGDHV+QKGS V P+ LRFDFSH + V  E LR +E +VN+ 
Sbjct: 572 SAANHTATHLLDYALKQILGDHVEQKGSFVSPDTLRFDFSHFEKVTDEQLREVERMVNDM 631

Query: 701 IKAELDVFS-KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSI 759
           I+ ++ +   ++    EAK +  + A+FGE Y D VRVV  G                  
Sbjct: 632 IRQDIHIDEHRDVPFDEAKKLGAI-ALFGEKYGDKVRVVRFGP----------------- 673

Query: 760 SAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVT----TGLAYKAFEAACSLEKEV 815
           S E CGG H S+T     F ++SE  +A GIRRI A T      L Y+  +   +++   
Sbjct: 674 SCEFCGGIHASSTGRIGFFKIISESSVAAGIRRIEAKTGQECEELLYQTEDILKAVKAFF 733

Query: 816 DDASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDA 875
           ++A  ++G + +  +   + KK  E    +AV+ A +     A       +    + ++ 
Sbjct: 734 NNAKDLQGVIKKYIEEHDSMKKEIEAFQAQAVERAAKQLVDKAREVNGVKVVSAVLPMNP 793

Query: 876 AAVREAVLKV-IEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPL 934
           AA ++   K+    +G  + V  T +  NK  +   + +       L   + +  A + +
Sbjct: 794 AAAKDLAFKIRAAVEGSLLCVLGTHD-NNKPQLSIMMSDDMVSDHGLNAGQMVREAAKLI 852

Query: 935 KGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAM 969
           +G  G G+   A   G +A  ++ A+D   E A +
Sbjct: 853 QG-GGGGQPHFAQAGGKNADGLSAAVDKVLELAKL 886


>gi|153826924|ref|ZP_01979591.1| alanyl-tRNA synthetase [Vibrio cholerae MZO-2]
 gi|254291229|ref|ZP_04962025.1| alanyl-tRNA synthetase [Vibrio cholerae AM-19226]
 gi|417823672|ref|ZP_12470264.1| alanyl-tRNA synthetase [Vibrio cholerae HE48]
 gi|149739227|gb|EDM53495.1| alanyl-tRNA synthetase [Vibrio cholerae MZO-2]
 gi|150422923|gb|EDN14874.1| alanyl-tRNA synthetase [Vibrio cholerae AM-19226]
 gi|340048301|gb|EGR09223.1| alanyl-tRNA synthetase [Vibrio cholerae HE48]
          Length = 860

 Score =  594 bits (1532), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 359/922 (38%), Positives = 515/922 (55%), Gaps = 80/922 (8%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR  F  FFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI++AWE LT V +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           P +RL  T +          D+EA DIW K   +PA R++  G K        DNFW+MG
Sbjct: 122 PKERLLVTVY--------ETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKH 289
           DTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG+++PLP   
Sbjct: 174 DTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPS 233

Query: 290 VDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRV 349
           VDTG+G ER+++I+Q   SNY+ DVF  +  A   A G +           D  + + RV
Sbjct: 234 VDTGMGIERISAIMQGVHSNYEIDVFQTLIKAAADAIGYQ-----------DLTNQSLRV 282

Query: 350 VADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVM 409
           VADHIR+ +F I DG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF+ LV  + +VM
Sbjct: 283 VADHIRSCAFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGAFFHKLVGPLAEVM 341

Query: 410 GDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTY 469
           G    ELK+++A + +++  EE +FG+TL +G+     A   + G+VL G+  F L+DTY
Sbjct: 342 GTAGVELKKQQALVEKVLRIEEENFGRTLDRGMSILNDALDQLSGQVLDGETVFKLYDTY 401

Query: 470 GFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRG 529
           GFP DLT  +A ERG  +D  GF  AM+E R+R+R A      G    D ++        
Sbjct: 402 GFPADLTNDVARERGFSIDEAGFEQAMEEQRQRAREA------GQFGTDYNSLIK----- 450

Query: 530 VLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEG 589
             AT+  F        +SV++ ++     + ++  G++  IVL ++ FYAE GGQ  D G
Sbjct: 451 -SATNTEFCGYTASRGQSVVREMFVEGAEVSTLSAGDKAIIVLDNTPFYAESGGQCGDTG 509

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
            ++   G F+V + Q  G  + H G L +G    + G++V   VD  RR  I+ NH+ TH
Sbjct: 510 VLKTDAGIFHVEDTQKLGNAIAHHGVLAQGV--LATGDQVDAIVDEKRRAAISLNHSATH 567

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +L+ ALR+VLG+HV QKGS+V  E LRFDFSH + + P  ++ +E +VN++I+   ++ +
Sbjct: 568 LLHAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTPAEIKEVERLVNQEIRHNHNIET 627

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
               + EAK   G  A+FGE Y D VRV+++G                  S ELCGG H 
Sbjct: 628 NIMNIDEAKA-KGAMALFGEKYDDQVRVLSMG----------------DFSTELCGGIHA 670

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKN 829
           SNT +   F ++SE GIA GIRRI AVT   A    +A  +           +  LLEK 
Sbjct: 671 SNTGDIGLFKIISEGGIAAGIRRIEAVTGEGALDYLDAQQAQHDAKVSEMAAKAKLLEK- 729

Query: 830 QVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQK 889
           ++++ + K+A +     +    + A      G    ++++  G D  A+R  V  +  Q 
Sbjct: 730 EIQQLKDKLAAKESAGLINQVKQIA------GVNVLVAQLN-GADNKALRGMVDDLKNQL 782

Query: 890 GMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQ 949
              +++   +    K  + AGV   +D + +++  E +      + G+ G G+  +A   
Sbjct: 783 SSGIIMLG-NVAEGKVGLIAGVT--NDLTNKVKAGELVNMVALQVGGK-GGGRPDMAQAG 838

Query: 950 GTDAAQVTPAMDLAAEFAAMKL 971
           GTDA  +  A++    + A +L
Sbjct: 839 GTDAHALPSALESVDAWIAERL 860


>gi|431928084|ref|YP_007241118.1| alanyl-tRNA synthetase [Pseudomonas stutzeri RCH2]
 gi|431826371|gb|AGA87488.1| alanyl-tRNA synthetase [Pseudomonas stutzeri RCH2]
          Length = 874

 Score =  594 bits (1532), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 371/935 (39%), Positives = 523/935 (55%), Gaps = 86/935 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F +FFE+K H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLRFFEEKGHTRVASSSLIPANDPTLLFTNAGMNQFKDCFLGL-----EKRAY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           TRA  +QKC+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT  K
Sbjct: 58  TRATTSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWEFLTSDK 117

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFW 228
              LP ++L+ T +        A D+EA DIW K   +PA R++  G         DNFW
Sbjct: 118 WLNLPKEKLWVTVY--------ATDDEAYDIWTKEVGVPAERMVRIGDNKGAPYASDNFW 169

Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
            MGDTGPCGPC+EI +D   +           D    IEIWN VF+QFNR +DG L PLP
Sbjct: 170 AMGDTGPCGPCTEIFFDHGEHIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLP 229

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
           A  VDTG+G ER++++LQ+  SNY+ D+F  + +A   A G            A++   +
Sbjct: 230 APSVDTGMGLERISAVLQHVNSNYEIDLFQSLLNAAADAIGC-----------ANEGQAS 278

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            +VVADHIR+  F I+DG  P NEGR YVLRRI+RRA R+G++ L A+  FF+ +V  +V
Sbjct: 279 LKVVADHIRSCGFLISDGVTPSNEGRGYVLRRIVRRACRHGNK-LGAKGSFFHRIVAALV 337

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
             MG+ FP LKQ++AHI  ++  EE  F KTL +G++  ++    + G V+ G   F L+
Sbjct: 338 AEMGEAFPGLKQQQAHIERVLKNEEEQFAKTLEQGLKILEQDLAGLAGSVIPGDVVFKLY 397

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFP+DLT  +A ER L +D EGF   M   RER+RSA       A  MD ++     
Sbjct: 398 DTYGFPVDLTGDIARERNLTLDEEGFEREMQAQRERARSAS------AFGMDYNS----- 446

Query: 527 KRGVLATDDSFKFIWFQDHKSVIK--AIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
              ++  +   +FI +Q      K  A++     ++S+  G E  +VL  + FYAE GGQ
Sbjct: 447 ---LVKVEGETRFIGYQGTSGTGKVLALFKEGMVVDSLSAGEEGVVVLDQTPFYAESGGQ 503

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           I D G++E     F VR+    G   +H G +  G  R  VG  V   VD   R+  A N
Sbjct: 504 IGDCGYLEAQGLRFDVRDTSKAGSAFLHHGIVDSGTLR--VGTGVQATVDATVRQATALN 561

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ ALRE+LG+HV QKGS+V  ++LRFDFSH + + PE LR +E  VN +I+  
Sbjct: 562 HSATHLLHAALREILGEHVSQKGSLVDSQRLRFDFSHFEAIKPEQLRALEDRVNAEIRRN 621

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
             V  +E  +  AK   G  A+FGE Y D VRV+ +G                  S ELC
Sbjct: 622 SAVEIEETDIDTAKA-KGAMALFGEKYGDSVRVLTMGG---------------GFSVELC 665

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVT--TGLAY------KAFEAACSLEKEVD 816
           GGTH++ T +   F + SE G+A G+RRI AVT    LAY      +  EAA  L+   D
Sbjct: 666 GGTHVNRTGDIGLFKITSEGGVAAGVRRIEAVTGAPALAYLNAAEEQLKEAANLLKGSRD 725

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
           +     G +LE+N  R+ +K++ +   + A     + A +A        ++  + GLD  
Sbjct: 726 NLLDKLGGILERN--RQLEKELEQLKAKAASAAGNDLAGSAVEVKGVRVLAARQDGLDGK 783

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
           A+   V ++  + G  V++    +  +K V+ AGV +  D + +L+  + L        G
Sbjct: 784 ALLALVDQLKNKLGSAVILLGGVQ-DDKVVLVAGVTQ--DLTSRLKAGD-LMKQAAAAVG 839

Query: 937 RCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
             G G+  +A G G++ A++  A+ LA  FA   L
Sbjct: 840 GKGGGRPDMAQGGGSEPARLDDALALALSFAEQGL 874


>gi|410628039|ref|ZP_11338770.1| alanyl-tRNA synthetase [Glaciecola mesophila KMM 241]
 gi|410152478|dbj|GAC25539.1| alanyl-tRNA synthetase [Glaciecola mesophila KMM 241]
          Length = 865

 Score =  594 bits (1532), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 358/933 (38%), Positives = 521/933 (55%), Gaps = 97/933 (10%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF DK H    SS +VP +DPTLLF NAGMNQ+K +FLGT     +  K TR
Sbjct: 7   QIRQAFLNFFADKGHQKVSSSSLVPSDDPTLLFTNAGMNQFKDVFLGT-----EQRKYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A ++Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI +AW  LT+  +L
Sbjct: 62  ATSSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHQAIGYAWSFLTEELKL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           P ++L  T +        + D+EA DIW     +P  +++     DNFW MGDTGPCGPC
Sbjct: 122 PKEKLLVTVY--------SEDDEAFDIWHNDIGIPKEKIIRIATSDNFWSMGDTGPCGPC 173

Query: 240 SEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFE 297
           SEI YD   +           D    IEIWN+VF+QFNR+++G + PLP   +DTG+G E
Sbjct: 174 SEIFYDHGEHIWGGPPGSPEEDGDRFIEIWNLVFMQFNRQANGDMLPLPKPSIDTGMGLE 233

Query: 298 RLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTL 357
           R+++I+QN  SNY+ D+F  +  A  +  G                D + RVVADHIR+ 
Sbjct: 234 RISAIIQNVHSNYEIDIFQNLIKATAKIVGVTSLE-----------DKSLRVVADHIRSC 282

Query: 358 SFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELK 417
           SF I+DG  P NEGR YVLRRI+RRAVR+G++ L A   FF  LV  +   MG+ +PEL 
Sbjct: 283 SFLISDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGATGVFFYKLVAALATEMGEAYPELN 341

Query: 418 QREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQ 477
           ++ A I +++  EE  F +TL +G+     A  +++GKV+ G   F L+DTYGFP DLT 
Sbjct: 342 EQRAVIEKVLRVEEEQFSRTLERGMLILNDALNELEGKVVPGDVVFKLYDTYGFPADLTN 401

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSF 537
            +A E+GL +D +GF  AM E R+R++ A N         D D    L       +D   
Sbjct: 402 DVAREKGLSIDEQGFEQAMAEQRKRAQKASN--------FDVDYNEQLR------SDLES 447

Query: 538 KFIWF--QDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLF 595
            F+ +  +D+ + +  ++   + +  +  G E  ++L  S FYAE GGQ  D G +    
Sbjct: 448 IFVGYEHEDNTATVTELFFQGQSVSELAAGAEGTVILDESPFYAEAGGQAGDTGTLVTDE 507

Query: 596 GSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFAL 655
           G F V++    G  + H G+      + SVG+ V+ KVD  RR  I  NH+ TH+++ AL
Sbjct: 508 GGFSVKDTVKLGKAIAHKGA---ALSKLSVGDSVLAKVDGVRRHAIKLNHSATHLMHAAL 564

Query: 656 REVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLA 715
           + +LG+HV+QKGS+V  ++LRFDFSH + +  E +  +E++VNEQI A   + +K   L 
Sbjct: 565 KSILGEHVNQKGSLVQADRLRFDFSHFEAMSKEQVLAVETMVNEQILANHPLQTKLMGLE 624

Query: 716 EAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREA 775
           +AK   G  A+FGE Y D VRVV++G                S S ELCGGTH+  T + 
Sbjct: 625 QAKEA-GAMALFGEKYDDEVRVVSMG----------------SFSMELCGGTHVERTGDI 667

Query: 776 EAFALLSEEGIAKGIRRITAVT--TGLAY---KAFE---AACSLEKEVDDASKIEGSLLE 827
             F ++SE GIA G+RRI AVT  T L Y   + FE    +  L+ +V  A +    L+E
Sbjct: 668 GLFKIISESGIASGVRRIEAVTGLTALHYVQQQTFELSSISAVLKTDVSTAGERVVQLIE 727

Query: 828 KNQVRKAQKKVAEENLQKAVKVATETAEAAAS---------NGKPFCISRVEVGLDAAAV 878
             Q +  +K+VA        K+  E A +A S         NG       V+ G+++ A+
Sbjct: 728 --QTKTLEKEVA--------KLKQEIANSAGSDLLSQINEINGVKVLSYHVQ-GIESGAL 776

Query: 879 REAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRC 938
           R  +  +  Q G  V++     T +K  + AGV +  D +++++  E +    Q + G+ 
Sbjct: 777 RTMIDDLKNQIGSGVILLGV-ATGDKVSLIAGVTK--DLTQKVKAGELVNFVAQQVGGKG 833

Query: 939 GKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           G G+  +A   G+    +  A+    E+   +L
Sbjct: 834 G-GRPDMAQAGGSQPENLDTAIASVKEWLQERL 865


>gi|258623515|ref|ZP_05718516.1| alanyl-tRNA synthetase [Vibrio mimicus VM573]
 gi|424809525|ref|ZP_18234902.1| alanyl-tRNA synthetase [Vibrio mimicus SX-4]
 gi|258584177|gb|EEW08925.1| alanyl-tRNA synthetase [Vibrio mimicus VM573]
 gi|342323013|gb|EGU18799.1| alanyl-tRNA synthetase [Vibrio mimicus SX-4]
          Length = 860

 Score =  594 bits (1532), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 367/924 (39%), Positives = 519/924 (56%), Gaps = 84/924 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR  F  FFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI++AWE LT V +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTGVLQL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           P +RL  T +          D+EA DIW K   +PA R++  G K        DNFW+MG
Sbjct: 122 PKERLLVTVY--------ETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKH 289
           DTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG+++PLP   
Sbjct: 174 DTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPS 233

Query: 290 VDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRV 349
           VDTG+G ER+++I+Q   SNY+ DVF  +  A   A G +           D  + + RV
Sbjct: 234 VDTGMGIERISAIMQGVHSNYEIDVFQTLIKAAADAIGYQ-----------DLTNQSLRV 282

Query: 350 VADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVM 409
           VADHIR+ +F I DG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF+ LV  + +VM
Sbjct: 283 VADHIRSCAFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGAFFHKLVGPLAEVM 341

Query: 410 GDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTY 469
           G    ELK+++A + +++  EE +FG+TL +G+    +A   + G+VL G+  F L+DTY
Sbjct: 342 GTAGVELKKQQALVEKVLRIEEENFGRTLDRGMSILNEALDQLSGQVLDGETVFKLYDTY 401

Query: 470 GFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRG 529
           GFP DLT  +A ERG  +D  GF  AM+E R+R+R A      G    D +   +L K  
Sbjct: 402 GFPADLTNDVARERGFSIDETGFEQAMEEQRQRAREA------GQFGTDYN---SLIKS- 451

Query: 530 VLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEG 589
             AT+  F        +SV++ I+     + ++  G++  IVL ++ FYAE GGQ  D G
Sbjct: 452 --ATNTEFCGYTASRGQSVVREIFVEGAEVSALSAGDKAIIVLDNTPFYAESGGQCGDTG 509

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
            ++   G F+V +    G  + H G L +G    + G++V   VD  RR  I+ NH+ TH
Sbjct: 510 VLKTEAGVFHVEDTHKLGNAIAHHGVLAQGV--LAKGDQVDAIVDEQRRAAISLNHSATH 567

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +L+ ALR+VLG+HV QKGS+V  E LRFDFSH + +    ++ +E +VN++I+    + +
Sbjct: 568 LLHAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTAAEIKEVERLVNQEIRRNHSIET 627

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
               + EAK   G  A+FGE Y D VRV+++G                  S ELCGG H 
Sbjct: 628 NIMNIDEAKA-KGAMALFGEKYDDQVRVLSMG----------------DFSTELCGGIHA 670

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVT--TGLAYKAFEAACSLEKEVDDASKIEGSLLE 827
           SNT +   F + SE GIA GIRRI AVT    L Y   + A    K V+ A+K    LLE
Sbjct: 671 SNTGDIGLFKITSEGGIAAGIRRIEAVTGEGALDYIEAQQAQHDAKVVEMAAK--AKLLE 728

Query: 828 KNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIE 887
           K ++++ + K+A +     +    + A      G    ++ +  G D  A+R  V  +  
Sbjct: 729 K-EIQQLKDKLAAKESAGLINQVKQIA------GVNVLVAELN-GADNKALRGMVDDLKN 780

Query: 888 QKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLAS 947
           Q G  +++   +    K  + AGV   SD + +++  E +      + G+ G G+  +A 
Sbjct: 781 QLGSGIIMLG-NIAEGKVGLIAGVT--SDLTNKVKAGELVNMVALQVGGK-GGGRPDMAQ 836

Query: 948 GQGTDAAQVTPAMDLAAEFAAMKL 971
             GTDA  +  A++    + A +L
Sbjct: 837 AGGTDAHALPSALESVDAWIAERL 860


>gi|229530358|ref|ZP_04419746.1| alanyl-tRNA synthetase [Vibrio cholerae 12129(1)]
 gi|229332131|gb|EEN97619.1| alanyl-tRNA synthetase [Vibrio cholerae 12129(1)]
          Length = 860

 Score =  594 bits (1532), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 359/922 (38%), Positives = 514/922 (55%), Gaps = 80/922 (8%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR  F  FFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI++AWE LT V +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           P +RL  T +          D+EA DIW K   +PA R++  G K        DNFW+MG
Sbjct: 122 PKERLLVTVY--------ETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKH 289
           DTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG+++PLP   
Sbjct: 174 DTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPS 233

Query: 290 VDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRV 349
           VDTG+G ER+++I+Q   SNY+ DVF  +  A   A G +           D  + + RV
Sbjct: 234 VDTGMGIERISAIMQGVHSNYEIDVFQTLIKAAADAIGYQ-----------DLTNQSLRV 282

Query: 350 VADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVM 409
           VADHIR+ +F I DG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF+ LV  + +VM
Sbjct: 283 VADHIRSCAFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGAFFHKLVGPLAEVM 341

Query: 410 GDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTY 469
           G    ELK+++A + +++  EE +FG+TL +G+     A   + G+VL G+  F L+DTY
Sbjct: 342 GTAGVELKKQQALVEKVLRIEEENFGRTLDRGMSILNDALDQLSGQVLDGETVFKLYDTY 401

Query: 470 GFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRG 529
           GFP DLT  +A ERG  +D  GF  AM+E R+R+R A      G    D ++        
Sbjct: 402 GFPADLTNDVARERGFSIDEAGFEQAMEEQRQRAREA------GQFGTDYNSLIK----- 450

Query: 530 VLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEG 589
             AT+  F        +SV++ ++     + ++  G++  IVL ++ FYAE GGQ  D G
Sbjct: 451 -SATNTEFCGYTASRGQSVVREMFVEGAEVSTLSAGDKAIIVLDNTPFYAESGGQCGDTG 509

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
            ++   G F+V + Q  G  + H G L +G    + G++V   VD  RR  I+ NH+ TH
Sbjct: 510 VLKTDAGIFHVEDTQKLGNAIAHHGVLAQGV--LATGDQVDAIVDEKRRAAISLNHSATH 567

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +L+ ALR+VLG+HV QKGS+V  E LRFDFSH + + P  ++ +E +VN++I+   ++ +
Sbjct: 568 LLHAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTPAEIKEVERLVNQEIRHNHNIET 627

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
               + EAK   G  A+FGE Y D VRV+++G                  S ELCGG H 
Sbjct: 628 NIMNIDEAKA-KGAMALFGEKYDDQVRVLSMG----------------DFSTELCGGIHA 670

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKN 829
           SNT     F ++SE GIA GIRRI AVT   A    +A  +           +  LLEK 
Sbjct: 671 SNTGNIGLFKIISEGGIAAGIRRIEAVTGEGALDYLDAQQAQHDAKVSEMAAKAKLLEK- 729

Query: 830 QVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQK 889
           ++++ + K+A +     +    + A      G    ++++  G D  A+R  V  +  Q 
Sbjct: 730 EIQQLKDKLAAKESAGLINQVKQIA------GVNVLVAQLN-GADNKALRGMVDDLKNQL 782

Query: 890 GMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQ 949
              +++   +    K  + AGV   +D + +++  E +      + G+ G G+  +A   
Sbjct: 783 SSGIIMLG-NVAEGKVGLIAGVT--NDLTNKVKAGELVNMVALQVGGK-GGGRPDMAQAG 838

Query: 950 GTDAAQVTPAMDLAAEFAAMKL 971
           GTDA  +  A++    + A +L
Sbjct: 839 GTDAHALPSALESVDAWIAERL 860


>gi|441495801|ref|ZP_20978040.1| Alanyl-tRNA synthetase [Fulvivirga imtechensis AK7]
 gi|441440550|gb|ELR73808.1| Alanyl-tRNA synthetase [Fulvivirga imtechensis AK7]
          Length = 847

 Score =  594 bits (1532), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 331/748 (44%), Positives = 433/748 (57%), Gaps = 62/748 (8%)

Query: 84  VVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGK 143
           +V  +DPTL+F NAGMNQ+K  FLG   P        R  +TQKC+R  GKHNDL++VG 
Sbjct: 1   MVNKDDPTLMFTNAGMNQFKDYFLGNKKPVH-----NRVADTQKCLRVSGKHNDLEEVGL 55

Query: 144 DTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDN 203
           DTYHHT FEMLGNWSFGDYFK EAI WAWELLT+VY LP DRLY T FGGD+   L  D 
Sbjct: 56  DTYHHTMFEMLGNWSFGDYFKKEAIAWAWELLTEVYALPKDRLYVTVFGGDKGDNLDVDQ 115

Query: 204 EARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRD-----AASLVNN 258
           EA D W   +   R+L    KDNFWEMGDTGPCGPCSEIH D     +        LVNN
Sbjct: 116 EAYDFWKVIVDEDRILYGSKKDNFWEMGDTGPCGPCSEIHIDLRPEEEVKKIQGKELVNN 175

Query: 259 DDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPI 318
           D P  +EIWN+VF++FNR++ G LK LPAKHVDTG+GFERL   +Q K SNYDTDVF P+
Sbjct: 176 DHPQVVEIWNLVFMEFNRQASGELKYLPAKHVDTGMGFERLCMAIQKKSSNYDTDVFTPL 235

Query: 319 FDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRR 378
            + +           KV     ++ D+A RV++DH+R ++FA+ADG  P N G  YV+RR
Sbjct: 236 IEHVAD-------KAKVTYGQNEQTDIAIRVISDHVRAIAFAVADGQLPSNTGAGYVIRR 288

Query: 379 ILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTL 438
           ILRRAVRYG   L  +  F   LV I+    G+VFPELK ++  I ++I  EEASF +TL
Sbjct: 289 ILRRAVRYGFTFLDFKSPFIYELVPILSSQFGEVFPELKSQQDFIAKVIEQEEASFLRTL 348

Query: 439 LKGIEKFKKAAQDVQG---KVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNA 495
             G++K     + ++G   KV+ G+ AF L+DTYGFPLDLT L+A E G  VD+E FN  
Sbjct: 349 ENGLKKLDGVKEQMKGSGEKVIEGKLAFDLYDTYGFPLDLTSLIARENGFTVDVESFNTE 408

Query: 496 MDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTG 555
           M + + RS+              ADA        V+   D+ +F+ ++  K + +A    
Sbjct: 409 MQKQKSRSK--------------ADAAKETGDWHVVGDQDNIEFVGYE--KLISEAQVVK 452

Query: 556 SEFIESVVPGNEV-GIVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIG 614
              I+    G EV  +VL  + FYAE GGQ+ D+G++E       V + +     ++H  
Sbjct: 453 YRTIKQ--KGKEVYQVVLNKTPFYAESGGQVGDQGYLEANGEKVTVLDTKKENDLIVHF- 509

Query: 615 SLTEGAGRFSVGEEVICK--VDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLP 672
                  +     E   K  V+  +RK    NH+ TH+L+ ALR+VLG+HV+QKGS+V  
Sbjct: 510 -----IDKLPANLEAPFKAVVNEKKRKQTMNNHSATHLLHAALRKVLGEHVEQKGSLVNE 564

Query: 673 EKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYP 732
           + LRFDFSH + +  E + R+  IVNE+I+  + +  K     E     G  A+FGE Y 
Sbjct: 565 KVLRFDFSHFQKMSEEEIARVGQIVNEKIRENITLDEKRNIPIEEAKKMGAMALFGEKYG 624

Query: 733 DPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRR 792
           D VRV+           DP        S ELCGGTH+S T     F ++SE  IA G+RR
Sbjct: 625 DFVRVITF---------DP------GYSVELCGGTHVSATGAIGFFKIVSESSIAAGVRR 669

Query: 793 ITAVTTGLAYKAFEAACSLEKEVDDASK 820
           I A+T   A     +   L  EV +  K
Sbjct: 670 IEAITGEAAENFINSQLQLIDEVREMLK 697


>gi|422022023|ref|ZP_16368532.1| alanyl-tRNA ligase [Providencia sneebia DSM 19967]
 gi|414097773|gb|EKT59426.1| alanyl-tRNA ligase [Providencia sneebia DSM 19967]
          Length = 875

 Score =  594 bits (1531), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 362/937 (38%), Positives = 531/937 (56%), Gaps = 95/937 (10%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSK--L 119
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG       L K   
Sbjct: 7   EIRQAFLDFFHTKGHQVVNSSSLVPNNDPTLLFTNAGMNQFKDVFLG-------LDKRAY 59

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           +RA   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI +AWELLT  +
Sbjct: 60  SRATTAQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAINFAWELLTGKE 119

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFW 228
            + LP ++L+ T +          D+EA +IW K   +P  R++  G         DNFW
Sbjct: 120 WFNLPKEKLWVTVY--------ETDDEAYEIWNKEIGIPVERIIRIGDNKGAPFASDNFW 171

Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
           +MGDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR+SDG ++PLP
Sbjct: 172 QMGDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQSDGRMEPLP 231

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
              VDTG+G ER+ ++LQ+  SNYD D+F  +  A    TGA   S K           +
Sbjct: 232 KPSVDTGMGLERIAAVLQHVNSNYDIDIFRDLIAAAAAVTGATDLSNK-----------S 280

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            RV+ADHIR+ +F ++DG  P NEGR YVLRRI+RRAVR+G  +L A+D FF  LV  ++
Sbjct: 281 LRVIADHIRSCAFLVSDGVIPSNEGRGYVLRRIIRRAVRHGY-MLGAKDTFFYKLVAPLI 339

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
           KVMG    EL++++A + +++  EE  F +TL +G++   +    ++G  L G+ AF L+
Sbjct: 340 KVMGPAADELQRQQATVEKVLQTEEEQFARTLERGLQLLDEELASLKGDTLEGETAFRLY 399

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFP+DLT  +  ER + VD EGF  AM++ R R+R +    A      D ++   + 
Sbjct: 400 DTYGFPIDLTADVCRERNIKVDEEGFERAMEDQRRRARESSGFGA------DYNSLIKVE 453

Query: 527 KRGVLATDDSFKFIWFQDHKSV--IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
           KR         +F  + D++ +  I AIY   + I+S+  G E  ++L  ++FYAE GGQ
Sbjct: 454 KRS--------EFSGYTDNEQLATITAIYKDGQPIDSLKTGEEGLVILDKTAFYAESGGQ 505

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           + D G ++   G+F V + Q YG  + HIG +  G     V   +  K++ +RR  I  N
Sbjct: 506 VGDIGTLQNESGNFVVTDTQKYGQAIGHIGKVESGI--LVVNHRIDAKINAERRDAIRLN 563

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ ALR+VLG HV QKGS+V  + LRFDFSH + + P  LR +E IVN QI+  
Sbjct: 564 HSATHLLHAALRQVLGTHVSQKGSLVNDKYLRFDFSHFQAMTPAQLREVEDIVNAQIRNN 623

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
             + ++   L +AK   G  A+FGE Y + VRV+++G                  S ELC
Sbjct: 624 TPIETELMDLEDAKA-KGAMALFGEKYEEHVRVLSMG----------------DFSIELC 666

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKI--- 821
           GGTH S T +   F +LSE G A G+RRI A TTG    A E   S   +++  + +   
Sbjct: 667 GGTHASRTGDIGLFRILSESGTAAGVRRIEA-TTGEG--ALENVHSQSDQLNAIAHLLKG 723

Query: 822 -EGSLLEK-----NQVRKAQKKVAE-ENLQKAVKVATETAEAAASNGKPFCISRVEVGLD 874
              SL+EK      + R+ +K++ + ++ Q + + A+ + +A   NG    +S++    +
Sbjct: 724 DMASLVEKVKASLEKSRQLEKEILQLKDQQASQESASLSNQAKDINGIKLLVSQLG-DTE 782

Query: 875 AAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPL 934
              +R  V  +  Q    ++V ST  + +K  +  GV   +D + +++  + ++   Q +
Sbjct: 783 PKLLRTMVDDLKNQLKSAIIVLST-TSGDKVSIIVGVT--NDLTAKIKAGDLISYVAQQV 839

Query: 935 KGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
            G+ G G+  +A   GTD + V  AM    E+ + +L
Sbjct: 840 GGKGG-GRPDMAQAGGTDVSAVPAAMASVEEWVSSRL 875


>gi|229525206|ref|ZP_04414611.1| alanyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
 gi|229338787|gb|EEO03804.1| alanyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
          Length = 860

 Score =  594 bits (1531), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 359/922 (38%), Positives = 515/922 (55%), Gaps = 80/922 (8%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR  F  FFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI++AWE LT V +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           P +RL  T +          D+EA DIW K   +PA R++  G K        DNFW+MG
Sbjct: 122 PKERLLVTVY--------ETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKH 289
           DTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG+++PLP   
Sbjct: 174 DTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPS 233

Query: 290 VDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRV 349
           VDTG+G ER+++I+Q   SNY+ DVF  +  A   A G +           D  + + RV
Sbjct: 234 VDTGMGIERVSAIMQGVHSNYEIDVFQTLIKAAADAIGYQ-----------DLTNQSLRV 282

Query: 350 VADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVM 409
           VADHIR+ +F I DG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF+ LV  + +VM
Sbjct: 283 VADHIRSCAFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGAFFHKLVGPLAEVM 341

Query: 410 GDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTY 469
           G    ELK+++A + +++  EE +FG+TL +G+     A   + G+VL G+  F L+DTY
Sbjct: 342 GTAGVELKKQQALVEKVLRIEEENFGRTLDRGMSILNDALDQLSGQVLDGETVFKLYDTY 401

Query: 470 GFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRG 529
           GFP DLT  +A ERG  +D  GF  AM+E R+R+R A      G    D ++        
Sbjct: 402 GFPADLTNDVARERGFSIDEAGFEQAMEEQRQRAREA------GQFGTDYNSLIK----- 450

Query: 530 VLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEG 589
             AT+  F        +SV++ ++     + ++  G++  IVL ++ FYAE GGQ  D G
Sbjct: 451 -SATNTEFCGYTASRGQSVVREMFVEGAEVSTLSAGDKAIIVLDNTPFYAESGGQCGDTG 509

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
            ++   G F+V + Q  G  + H G L +G    + G++V   VD  RR  I+ NH+ TH
Sbjct: 510 VLKTDAGIFHVEDTQKLGNAIAHHGVLAQGV--LATGDQVDAIVDEKRRAAISLNHSATH 567

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +L+ ALR+VLG+HV QKGS+V  E LRFDFSH + + P  ++ +E +VN++I+   ++ +
Sbjct: 568 LLHAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTPAEIKEVERLVNQEIRHNHNIET 627

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
               + EAK   G  A+FGE Y D VRV+++G                  S ELCGG H 
Sbjct: 628 NIMNIDEAKA-KGAMALFGEKYDDQVRVLSMG----------------DFSTELCGGIHA 670

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKN 829
           SNT +   F ++SE GIA GIRRI AVT   A    +A  +           +  LLEK 
Sbjct: 671 SNTGDIGLFKIISEGGIAAGIRRIEAVTGEGALDYLDAQQAQHDAKVSEMAAKAKLLEK- 729

Query: 830 QVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQK 889
           ++++ + K+A +     +    + A      G    ++++  G D  A+R  V  +  Q 
Sbjct: 730 EIQQLKDKLAAKESAGLINQVKQIA------GVNVLVAQLN-GADNKALRGMVDDLKNQL 782

Query: 890 GMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQ 949
              +++   +    K  + AGV   +D + +++  E +      + G+ G G+  +A   
Sbjct: 783 SSGIIMLG-NVAEGKVGLIAGVT--NDLTNKVKAGELVNMVALQVGGK-GGGRPDMAQAG 838

Query: 950 GTDAAQVTPAMDLAAEFAAMKL 971
           GTDA  +  A++    + A +L
Sbjct: 839 GTDAHALPSALESVDAWIAERL 860


>gi|167550339|ref|ZP_02344096.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
 gi|205324713|gb|EDZ12552.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
          Length = 876

 Score =  594 bits (1531), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 355/916 (38%), Positives = 513/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT    +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  + +A+ + TGA     K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIEAVAKVTGATDLGNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F +ADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  +++V
Sbjct: 283 VIADHIRSCAFLVADGVLPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIEV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    ELK+++A + +++  EE  F +TL +G+    +    +QG  L G+ AF L+DT
Sbjct: 342 MGSAGEELKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + +E++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   +F V + Q YG  + H+G L+ GA    VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGAGFTFAVDDTQKYGQAIGHLGKLSAGA--LKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + +    +R +E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVAQKGSLVSDKVLRFDFSHNEAMKLSEIREVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLDAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A GIRRI AVT   A     A      ++         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGIRRIEAVTGEGAMATVHAQSDRLNDIAHLLKGDSQN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
              K+   L    Q+ K  +++ ++    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LGDKVRAVLERTRQLEKELQQLKDQ--AAAQESANLSSKAVDLNGVKLLVSEL-AGIEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  V+V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTVIVLAT-VVEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|381187503|ref|ZP_09895067.1| alanyl-tRNA synthetase [Flavobacterium frigoris PS1]
 gi|379650631|gb|EIA09202.1| alanyl-tRNA synthetase [Flavobacterium frigoris PS1]
          Length = 878

 Score =  594 bits (1531), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 333/754 (44%), Positives = 452/754 (59%), Gaps = 52/754 (6%)

Query: 63  VRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRA 122
           VR  F  FF+ K H+   S+P+V  +DPTL+F N+GM Q+K  FLG A P     K TR 
Sbjct: 6   VRKQFLDFFQSKGHLIVPSAPIVLKDDPTLMFNNSGMAQFKEYFLGNATP-----KSTRI 60

Query: 123 CNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLP 182
            +TQKC+R  GKHNDL+DVG DTYHHT FEMLGNWSFGDYFK EA+ WAWE LT+V +L 
Sbjct: 61  ADTQKCLRVSGKHNDLEDVGFDTYHHTMFEMLGNWSFGDYFKEEALPWAWEFLTEVLKLD 120

Query: 183 ADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPCSEI 242
            DRLY + F G+E   +  D +A DIW +F+P  R++    KDNFWEMGD GPCGPCSEI
Sbjct: 121 KDRLYVSVFEGNEAENVPFDQQAFDIWKQFVPEDRIILGNKKDNFWEMGDQGPCGPCSEI 180

Query: 243 HYD-RTGNRDAA----SLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFE 297
           H D RT    AA    SLVN D P  +EIWN VF++FNR++DGSL+ LPA+HVDTG+GFE
Sbjct: 181 HIDLRTDEERAAVTGRSLVNADHPQVVEIWNNVFMEFNRKADGSLEKLPAQHVDTGMGFE 240

Query: 298 RLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVG--ADDADKVDMAYRVVADHIR 355
           RL   +QN  SNYDTDVF P+ + ++Q TG +  S +V   +++ +K ++A RV+ DHIR
Sbjct: 241 RLCMAMQNVTSNYDTDVFTPLIEKVEQITGLKYTSNEVKDISEEQNKTNIAIRVIVDHIR 300

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPE 415
            ++FAIADG  P N G  YV+RRILRRA+RYG   L  ++ F   LV ++   MG+ FPE
Sbjct: 301 AVAFAIADGQLPSNTGAGYVIRRILRRAIRYGFTFLNIKEAFIYQLVEVLADQMGEFFPE 360

Query: 416 LKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDL 475
           +K ++  +  +I  EEASF +TL +G++  +    + +G  ++G  AF L+DT+GFP DL
Sbjct: 361 IKSQQNLVTNVIREEEASFLRTLDQGLQLLENVIAETKGNEVAGAKAFELYDTFGFPKDL 420

Query: 476 TQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDD 535
           T L+  ERGL +D  GF+ AM E + RSR+A              +  +     VL   +
Sbjct: 421 TALILRERGLELDEAGFDVAMQEQKARSRAA--------------SEISTEDWSVLIPGN 466

Query: 536 SFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLF 595
              F+ +   +S  +A  T    ++S   G    IVL +S FY E GGQI D+G +    
Sbjct: 467 VETFVGYDQTES--EAKITRIRKVDSKKDGVLYQIVLDNSPFYPEGGGQIGDKGTLVSAN 524

Query: 596 GSFYVRNVQIYGGFVIHIG-SLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFA 654
            +  + + +     ++H    L E     +V    I KV+ D R   A NH+ TH+++ A
Sbjct: 525 ETIQIIDTKKENNLILHFTKQLPE-----NVNASFIAKVNTDLRAATAKNHSATHLMHLA 579

Query: 655 LREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATL 714
           LR VLG HV+QKGS+V P+ LRFDFSH   V  E L+++E  VN +I+ ++ +  +    
Sbjct: 580 LRTVLGTHVEQKGSLVNPKNLRFDFSHFAKVTDEELQQVEDFVNARIQEQIALIERRDIP 639

Query: 715 AEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTRE 774
                  G  A+FGE Y D VR +  G                  S ELCGG H+ NT +
Sbjct: 640 FAQAVEEGAMALFGEKYGDHVRAIKFGE-----------------SMELCGGIHVQNTAD 682

Query: 775 AEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAA 808
              F ++SE  +A GIRRI A+ TG A K F A+
Sbjct: 683 IWYFKIVSEGAVAAGIRRIEAI-TGDAVKGFFAS 715


>gi|347536929|ref|YP_004844354.1| alanyl-tRNA synthetase [Flavobacterium branchiophilum FL-15]
 gi|345530087|emb|CCB70117.1| Alanine--tRNA ligase [Flavobacterium branchiophilum FL-15]
          Length = 882

 Score =  594 bits (1531), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 340/838 (40%), Positives = 487/838 (58%), Gaps = 73/838 (8%)

Query: 63  VRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRA 122
           VR  F  FF+ K H+   S+P+V  +DPTL+F N+GM Q+K  FLG   P ++     R 
Sbjct: 6   VRKQFLDFFQSKGHLIVPSAPIVLKDDPTLMFNNSGMAQFKEYFLGNGTPKSK-----RI 60

Query: 123 CNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLP 182
            +TQKC+R  GKHNDL+DVG DTYHHT FEMLGNWSFGDYFK +AI WAWELLT+VY++P
Sbjct: 61  ADTQKCLRVSGKHNDLEDVGFDTYHHTMFEMLGNWSFGDYFKKDAINWAWELLTEVYKIP 120

Query: 183 ADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPCSEI 242
            + LY + F G+    +  D EA D+W + +   R++    KDNFWEMGD GPCGPCSEI
Sbjct: 121 KENLYVSVFEGNPDENVPFDQEAWDLWKELVDEDRIILGNKKDNFWEMGDQGPCGPCSEI 180

Query: 243 HYDRTGNRDAA-----SLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFE 297
           H D     + A     SLVNND P  +EIWN VF++FNR++DGSL+ LPA+HVDTG+GFE
Sbjct: 181 HVDLRSEEEKALVSGKSLVNNDHPQVVEIWNNVFMEFNRKADGSLEKLPAQHVDTGMGFE 240

Query: 298 RLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVG--ADDADKVDMAYRVVADHIR 355
           RL   LQ K SNYDTDVF P+ + ++Q TG +  S ++   +++ +K ++A RVVADH+R
Sbjct: 241 RLCMALQGKTSNYDTDVFGPLIEKVEQITGLQYTSNEIQNISEEQNKTNIAIRVVADHVR 300

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPE 415
            ++FAIADG  P N G  YV+RRILRRA+RYG   L  ++ F   LV ++   + + FPE
Sbjct: 301 AVAFAIADGQLPSNTGAGYVIRRILRRAIRYGFTFLNTKEPFIYELVAVLSNQLSEFFPE 360

Query: 416 LKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDL 475
           +K +++ +  +I  EEASF +TL +G++  +       G  +SG+ AF L+DT+GFP+DL
Sbjct: 361 IKSQQSLVTNVIREEEASFLRTLDQGLQLLENVMNQTAGTEISGEKAFELYDTFGFPIDL 420

Query: 476 TQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDD 535
           T L+  ERG  +D  GF  AM E + RSR+A         V   D T       VL   +
Sbjct: 421 TALILRERGYQLDEAGFEKAMQEQKSRSRAASE-------VSTEDWT-------VLIPGN 466

Query: 536 SFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLF 595
             +F+ +   ++ +K   +    ++S   G    IVL ++ FY E GGQ+ D+G +    
Sbjct: 467 VEQFVGYDQTENEVK--ISRIRKVDSKKDGVLYQIVLDATPFYPEGGGQVGDKGVLTPAL 524

Query: 596 ----GSFYVRNVQIYGGFVIHIG-SLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHM 650
               G+  + + +     ++HI   L E     +V    + KV+ D R L + NH+ TH+
Sbjct: 525 SKGEGAIEIIDTKKENNLILHIAKQLPE-----NVSASFVAKVNTDLRALSSRNHSATHL 579

Query: 651 LNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSK 710
           ++ ALR +LG HV+QKGS+V P  LRFDFSH   +  E L+ +E+ VN +I+ +L +  +
Sbjct: 580 MHQALRSILGTHVEQKGSLVNPNYLRFDFSHFAKMTDEELQAVENFVNARIQEQLPLIER 639

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
            +   +     G  A+FGE Y D VR +  G                  S ELCGG H++
Sbjct: 640 RSIPIQQALDEGAMALFGEKYGDNVRAIKFGE-----------------SMELCGGIHVN 682

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKNQ 830
           NT E   F ++SE  +A GIRRI A+T+      F    S E  +++   I+G+L     
Sbjct: 683 NTAEIWHFKIVSEGAVAAGIRRIEAITSDAVKAHF---ASYENTLNE---IKGALKNPQD 736

Query: 831 VRKAQKKVAEEN--LQKAVKV----------ATETAEAAASNGKPFCISRVEVGLDAA 876
           + KA   + EEN  L K ++           A+ TA+    NG  F  ++V++  + A
Sbjct: 737 ILKAVHHLQEENAKLSKQIEALMRDKVKHLKASLTAQIQEVNGVQFLATQVDLNPEGA 794


>gi|89890332|ref|ZP_01201842.1| alanyl-tRNA synthetase [Flavobacteria bacterium BBFL7]
 gi|89517247|gb|EAS19904.1| alanyl-tRNA synthetase [Flavobacteria bacterium BBFL7]
          Length = 873

 Score =  594 bits (1531), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 356/844 (42%), Positives = 487/844 (57%), Gaps = 71/844 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R TF  F++ K H    S+P+V  NDPTL+F NAGMN +K  FLG  D     SK 
Sbjct: 3   SQQIRQTFLDFYKSKQHEVVASAPMVIKNDPTLMFVNAGMNPFKEYFLGIND-----SKY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWELLT+VY
Sbjct: 58  SRIADSQKCLRVSGKHNDLEEVGVDTYHHTMFEMLGNWSFGDYFKKEAIAWAWELLTEVY 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           ++  D LY T F GD    L  D EA D W + +   R+L    KDNFWEMGD GPCGPC
Sbjct: 118 KIDKDCLYVTIFEGDTSENLERDTEAYDYWKELIAEDRILNGNKKDNFWEMGDQGPCGPC 177

Query: 240 SEIHYD-RTGNR----DAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D RT       D ASLVN D P  +EIWN+VF+Q+ R +DGSLK LPA+HVDTG+
Sbjct: 178 SEIHVDIRTAEEKAAVDGASLVNADHPQVVEIWNLVFMQYKRMADGSLKNLPAQHVDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL  ++Q   SNYDTDVF P+   I+  TG   Y GK      ++ D+A RV+ADH+
Sbjct: 238 GFERLAMVMQGVQSNYDTDVFTPLIREIETITG-HAY-GKT-----EQEDIAIRVIADHV 290

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R +SF+IADG  P N G  YV+RRILRRA+RYG   L  ++ F   LVN + K MGD FP
Sbjct: 291 RAVSFSIADGQLPSNNGAGYVIRRILRRAIRYGFTYLNKKEPFIYMLVNTLSKQMGDAFP 350

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQGKVLSGQDAFILWDTYGF 471
           ELK ++  I  +I  EE SF + L +G   ++    AA+     ++ G  AF L+DTYGF
Sbjct: 351 ELKSQKNLILNVIKEEEQSFLRALDQGLVLLDSMITAAKSNSQNIIDGNKAFELYDTYGF 410

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           P+DLT L+  E+G+ +D  GF  AM   ++RSR+A            +D T        L
Sbjct: 411 PIDLTALILREKGMELDEAGFEKAMAAQKQRSRAASETTT-------SDWTE-------L 456

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            +DD+ +FI +   ++ ++   +    + +   G+   +V   + FY E GGQ  D+G++
Sbjct: 457 RSDDTQEFIGYDKLEADVRI--SRYRKVTTKKDGDLYQLVFNMTPFYGESGGQTGDKGYL 514

Query: 592 EGLFG-SFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHM 650
           E   G + Y+ + +   G  +H   LT+   +   G      VD ++R   + NHT TH+
Sbjct: 515 ESPSGDTIYIIDTKKENGQTVH---LTKNLPKDLEGSHKAV-VDANQRHRTSSNHTATHL 570

Query: 651 LNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSK 710
           L+ ALR+VLGDHV+QKGS+V    LRFDFSH   V PE L+ +E+ VN +I+ +L +   
Sbjct: 571 LHQALRKVLGDHVEQKGSMVRSASLRFDFSHFAKVTPEQLQEVENFVNARIREQLPLEEN 630

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
                +A   +G  A+FGE Y D VR +  G+                 S ELCGGTH++
Sbjct: 631 RTNTYDAAVEDGAMALFGEKYGDVVRTIKFGK-----------------SYELCGGTHVA 673

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACS-----LEKEVDDASKIEGSL 825
           NT +   F ++SE  +A GIRRI A+++  A K F A  S     ++  +   +K     
Sbjct: 674 NTADVWHFKIMSEGAVAAGIRRIEAISSD-AVKDFFAEQSRHFDEIKTILKSNTKNPADA 732

Query: 826 LEKNQVRKAQKKVAEENLQKAVKVATETAEAAAS----NGKPFCISRVEVGLDAAAVREA 881
           + + Q   A  K   E L KA K      +  AS    NG  F  ++ +  LDA +V+E 
Sbjct: 733 IAQLQDENAALKKEIEQLLKA-KAGNLKGDLIASAQDINGVNFIATQTD--LDAKSVKEL 789

Query: 882 VLKV 885
             ++
Sbjct: 790 AFEI 793


>gi|189345755|ref|YP_001942284.1| alanyl-tRNA synthetase [Chlorobium limicola DSM 245]
 gi|189339902|gb|ACD89305.1| alanyl-tRNA synthetase [Chlorobium limicola DSM 245]
          Length = 888

 Score =  594 bits (1531), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 368/935 (39%), Positives = 532/935 (56%), Gaps = 93/935 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R +F  FF  K H   +S+PV+P +DPTLLF NAGMNQ+K +FLG           
Sbjct: 3   SREIRQSFLDFFAGKEHKIVRSAPVIPADDPTLLFTNAGMNQFKDVFLGKGS-----RPY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            RA +TQKCIRA GKHNDL+DVG+DTYHHTFFEMLGNWSFGDY+K EAI WAWELLT V+
Sbjct: 58  VRAADTQKCIRASGKHNDLEDVGRDTYHHTFFEMLGNWSFGDYYKKEAISWAWELLTSVW 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIW--LKFLPASRVLPFGCKDNFWEMGDTGPCG 237
           +LP +RLYAT F          D+E+  +W  +  +P   +L FG KDNFWEMG++GPCG
Sbjct: 118 KLPKERLYATVF--------RDDDESFQLWQTVTDIPHDHILRFGEKDNFWEMGESGPCG 169

Query: 238 PCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFE 297
           PCSEIH D T +    SLVN  D   IE+WN+VFIQ+NR+ DG L+PLP +HVDTG+GFE
Sbjct: 170 PCSEIHIDLTEDGSGKSLVNVGDYRVIELWNLVFIQYNRQGDGRLEPLPQRHVDTGMGFE 229

Query: 298 RLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTL 357
           R+ +++Q K SNYDTDVF P+FD I + TG   Y   +     D  D+A RV+ADH RTL
Sbjct: 230 RVCAVMQGKGSNYDTDVFRPLFDRITEITGV-VYKATMD----DPCDIAMRVIADHARTL 284

Query: 358 SFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELK 417
           +FA++DG+ P NEGR YVLRRILRRA+RY S+ L   +   + LV  +   MG+ FPEL 
Sbjct: 285 TFALSDGAMPSNEGRGYVLRRILRRALRY-SKTLGCSEPILHQLVGTLAVSMGEEFPELV 343

Query: 418 QREAHIREIIAAEEASFGKTLLKGIEKFKKA---AQDVQGKVLSGQDAFILWDTYGFPLD 474
           +++  +  I+ AEE SF  TL +GIE F +    A+      ++G DAF L+DT+GFPLD
Sbjct: 344 KQQETVSRIVRAEEESFLATLDRGIEIFNEVIAGARAAGAAAITGDDAFRLYDTFGFPLD 403

Query: 475 LTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATD 534
           LT+LMA E G  VD  GF + M E + R+R  Q+++                KR +   +
Sbjct: 404 LTRLMAAEAGFEVDEPGFEHCMQEQKTRAR--QDRK---------------DKRQL--QE 444

Query: 535 DSFKFIWFQDHKSVIKAIYTGSEFIE--------SVVPGNEVGIVLASSSFYAEQGGQIF 586
           D  +++WF + ++   +++TG + +E        S++P + V +VL  + FYAE GGQ  
Sbjct: 445 DGGEWMWFSEERT---SVFTGYDSLEELSSIAGVSMLP-DRVLLVLDRTPFYAESGGQSG 500

Query: 587 DEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSV---------GEEVICKVDYDR 637
           D G+IE       V + +  G  ++H+ +      R S          G ++ C+   DR
Sbjct: 501 DCGWIETAEYRLKVSDTRKDGDAIVHVVTEAHDTARDSAIDPADVSFDGGKLACRASVDR 560

Query: 638 --RKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIES 695
             R+    NHT TH+L+ ALR +LG HV QKGS V  E+LRFDFSH   +    L  +ES
Sbjct: 561 ANRQGTERNHTATHLLHAALRRILGQHVQQKGSFVSAERLRFDFSHFSKLTSGELESVES 620

Query: 696 IVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKE 755
            VNEQI++   V   +    +     G  A FG+ Y D VRVV I               
Sbjct: 621 EVNEQIRSAETVIKHQDVPYDEALGKGALAFFGDKYADRVRVVEIP-------------- 666

Query: 756 WLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV 815
              +S ELCGGTH+ +  +   F ++SE  +A G+RRI A+T   A +         +E+
Sbjct: 667 --GLSIELCGGTHVDSIGQIGLFKIVSESSVASGVRRIEALTGKAAEQLMWKEYRELQEI 724

Query: 816 DDASKIE------GSLLEKNQVRKAQKKVAEENLQKAV-KVATETAEAAASNGKPFCISR 868
               K++        ++E  + +K  +K+ +E    A+  +     +A+        ++R
Sbjct: 725 RHMLKLKAEEPVTAKIVELAESKKELEKLLQEYRSSALADILLHALDASEEVNGIRIMAR 784

Query: 869 VEVGLDAAAVREAVLKVIEQ-KGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWL 927
           +   +DA A+R+A L + E+  G   ++ + DE     +  AG  +++ +   ++  + +
Sbjct: 785 MLDHVDAEALRQATLALREKVAGSAGILCTVDEGKVSLIAFAG--DRAVRDFGIDAGKLV 842

Query: 928 TAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDL 962
             A + ++G  G GK   A+  G +   +  A ++
Sbjct: 843 REAAKNVQG-GGGGKPEFATAGGKNPEGIEKAFEV 876


>gi|386820933|ref|ZP_10108149.1| alanine--tRNA ligase [Joostella marina DSM 19592]
 gi|386426039|gb|EIJ39869.1| alanine--tRNA ligase [Joostella marina DSM 19592]
          Length = 872

 Score =  594 bits (1531), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 355/876 (40%), Positives = 498/876 (56%), Gaps = 67/876 (7%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R  F KFFEDK+H    S+P+V  +DPTL+F NAGMNQ+K  FLG   P  Q    
Sbjct: 4   SREIRKQFLKFFEDKSHEIVSSAPMVIKDDPTLMFTNAGMNQFKEYFLGNKVPKNQ---- 59

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            RA +TQKC+R  GKHNDL++VGKDTYHHT FEMLGNWSFGDYFK +AI+WAWELLT+VY
Sbjct: 60  -RATDTQKCLRVSGKHNDLEEVGKDTYHHTMFEMLGNWSFGDYFKKDAIKWAWELLTEVY 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           ++  D LY T F G +  GL  D +A D W + +P SR++    KDNFWEMGD GPCGP 
Sbjct: 119 KIDKDILYITVFEGADAEGLPMDQDAYDFWKEIVPESRIILGNKKDNFWEMGDQGPCGPS 178

Query: 240 SEIHYD-RTGNRDA----ASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D R+    A    A LVN D P  +EIWN+VF++FNR++DGSL+ LPA+HVDTG+
Sbjct: 179 SEIHVDIRSAEEKAKIPGADLVNQDHPQVVEIWNLVFMEFNRKADGSLEKLPAQHVDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL  +LQ K SNYDTDVF PI   I+  T ++ Y  K      +++D+A RV+ADH+
Sbjct: 239 GFERLCMVLQGKKSNYDTDVFTPIIREIETITNSK-YGVK------EEIDIAIRVIADHV 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R +SFAIADG  P N G  YV+RRILRRA+RYG   L  ++ F   LV+ ++K M + FP
Sbjct: 292 RAVSFAIADGQLPSNTGAGYVIRRILRRAIRYGFTFLDQKEAFIYKLVDTLIKQMHEFFP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLD 474
           ELK+ +  I  +I  EE SF +TL +G+            KV+SG  AF L+DTYGFP+D
Sbjct: 352 ELKKEKNIIINVIREEENSFLRTLAQGLVLLDNIIGANTDKVISGSKAFELYDTYGFPID 411

Query: 475 LTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATD 534
           LT L+ +E+G  +D +GF   +++ + RSR+A   + G                 VL  D
Sbjct: 412 LTALILDEKGFQLDEKGFQEELEKQKNRSRAATKIETGDW--------------EVLIDD 457

Query: 535 DSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGL 594
              +F+ +   ++ ++   T    +ES   G    +V   + FYAE GGQ+ D+G++E  
Sbjct: 458 PIEEFVGYDTLETQVRI--TRYRKVESKKDGELYQLVFNITPFYAEGGGQVGDKGYLEST 515

Query: 595 FGS-FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNF 653
            G   Y+ + +     +IH           ++ +     VD  +R   A NHT TH+L+ 
Sbjct: 516 NGDVIYIIDTKKENNLIIHFSKNLPK----NLNDPFRAVVDEKQRNRTAANHTATHLLHQ 571

Query: 654 ALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEAT 713
           ALR VLG HV+QKGS+V    LRFDFSH   V  E L ++E  VN +I+ +L +      
Sbjct: 572 ALRSVLGTHVEQKGSMVHSGYLRFDFSHFAKVTSEELTQVEDFVNARIREQLPLQENRHM 631

Query: 714 LAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTR 773
             +     G  A+FGE Y D VR V  G                  S ELCGGTH++NT 
Sbjct: 632 PYQEAIKEGAVALFGEKYGDLVRAVKFGE-----------------SMELCGGTHVANTG 674

Query: 774 EAEAFALLSEEGIAKGIRRITAVTTGLAYKAF--------EAACSLEKEVDDASKIEGSL 825
           +   F + +E  +A G+RRI A+T   A + F        +    L+    D  K   +L
Sbjct: 675 DIWHFIITNESAVAAGVRRIEAITFDAAKEYFANQTEAFNKVKAVLKNNAVDPIKAITAL 734

Query: 826 LEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKV 885
            E+N   K Q +   ++  K +K     AE    NG  F   +V+  LD  ++++   ++
Sbjct: 735 QEENTAMKKQIEQLLKDKAKGLK-GELKAELEEVNGVRFLAKKVD--LDQGSIKDLAFEL 791

Query: 886 IEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQL 921
             +     ++F++ E   K ++   V ++  + K+L
Sbjct: 792 GSEFKNLYLLFAS-ENDGKVILTCYVSKEIVKEKEL 826


>gi|424658420|ref|ZP_18095677.1| alanyl-tRNA synthetase [Vibrio cholerae HE-16]
 gi|408055142|gb|EKG90085.1| alanyl-tRNA synthetase [Vibrio cholerae HE-16]
          Length = 860

 Score =  594 bits (1531), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 359/922 (38%), Positives = 514/922 (55%), Gaps = 80/922 (8%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR  F  FFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI++AWE LT V +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           P +RL  T +          D+EA DIW K   +PA R++  G K        DNFW+MG
Sbjct: 122 PKERLLVTIY--------ETDDEAFDIWNKKIGIPADRIIRIGDKKGGKKFDSDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKH 289
           DTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG+++PLP   
Sbjct: 174 DTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPS 233

Query: 290 VDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRV 349
           VDTG+G ER+++I+Q   SNY+ DVF  +  A   A G +           D  + + RV
Sbjct: 234 VDTGMGIERISAIMQGVHSNYEIDVFQTLIKAAADAIGYQ-----------DLTNQSLRV 282

Query: 350 VADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVM 409
           VADHIR+ +F I DG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF+ LV  + +VM
Sbjct: 283 VADHIRSCAFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGAFFHKLVGPLAEVM 341

Query: 410 GDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTY 469
           G    ELK+++A + +++  EE +FG+TL +G+     A   + G+VL G+  F  +DTY
Sbjct: 342 GTAGVELKKQQALVEKVLRIEEENFGRTLDRGMSILNDALDQLSGQVLDGETVFKFYDTY 401

Query: 470 GFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRG 529
           GFP DLT  +A ERG  +D  GF  AM+E R+R+R A      G    D ++        
Sbjct: 402 GFPADLTNDVARERGFSIDESGFEQAMEEQRQRAREA------GQFGTDYNSLIK----- 450

Query: 530 VLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEG 589
             AT+  F        +SV++ ++     + ++  G++  IVL ++ FYAE GGQ  D G
Sbjct: 451 -SATNTEFCGYTASRGQSVVREMFVEGAEVSALSAGDKAIIVLDNTPFYAESGGQCGDTG 509

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
            ++   G F+V + Q  G  + H G L +G    + G++V   VD  RR  I+ NH+ TH
Sbjct: 510 VLKTDAGIFHVEDTQKLGNAIAHHGVLAQGV--LATGDQVDAIVDEKRRAAISLNHSATH 567

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +L+ ALR+VLG+HV QKGS+V  E LRFDFSH + + P  ++ +E +VN++I+   D+ +
Sbjct: 568 LLHAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTPAEIKEVERLVNQEIRHNHDIET 627

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
               + EAK   G  A+FGE Y D VRV+++G                  S ELCGG H 
Sbjct: 628 NIMNIDEAKA-KGAMALFGEKYDDQVRVLSMG----------------DFSTELCGGIHA 670

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKN 829
           SNT +   F ++SE GIA GIRRI AVT   A    +A  +           +  LLEK 
Sbjct: 671 SNTGDIGLFKIISEGGIAAGIRRIEAVTGEGALDYLDAQQAQYDAKVSEMAAKAKLLEK- 729

Query: 830 QVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQK 889
           ++++ + K+A +     +    + A      G    ++++  G D  A+R  V  +  Q 
Sbjct: 730 EIQQLKDKLAAKESAGLINQVKQIA------GVNVLVAQLN-GADNKALRGMVDDLKNQL 782

Query: 890 GMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQ 949
              +++   +    K  + AGV   +D + +++  E +      + G+ G G+  +A   
Sbjct: 783 SSGIIMLG-NVAEGKVGLIAGVT--NDLTNKVKAGELVNMVALQVGGK-GGGRPDMAQAG 838

Query: 950 GTDAAQVTPAMDLAAEFAAMKL 971
           GTDA  +  A++    + A +L
Sbjct: 839 GTDAHALPSALESVDAWIAERL 860


>gi|421350380|ref|ZP_15800746.1| alanyl-tRNA synthetase [Vibrio cholerae HE-25]
 gi|395954502|gb|EJH65112.1| alanyl-tRNA synthetase [Vibrio cholerae HE-25]
          Length = 860

 Score =  594 bits (1531), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 360/922 (39%), Positives = 516/922 (55%), Gaps = 80/922 (8%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR  F  FFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI++AWE LT V +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           P +RL  T +          D+EA DIW K   +PA R++  G K        DNFW+MG
Sbjct: 122 PKERLLVTVY--------ETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKH 289
           DTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG+++PLP   
Sbjct: 174 DTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPS 233

Query: 290 VDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRV 349
           VDTG+G ER+++I+Q   SNY+ DVF  +  A   A G +           D  + + RV
Sbjct: 234 VDTGMGIERISAIMQGVHSNYEIDVFQTLIKAAADAIGYQ-----------DLTNQSLRV 282

Query: 350 VADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVM 409
           VADHIR+ +F I DG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF+ LV  + +VM
Sbjct: 283 VADHIRSCAFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGAFFHKLVGPLAEVM 341

Query: 410 GDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTY 469
           G    ELK+++A + +++  EE +FG+TL +G+     A   + G+VL G+  F L+DTY
Sbjct: 342 GTAGVELKKQQALVEKVLRIEEENFGRTLDRGMSILNDALDQLSGQVLDGETVFKLYDTY 401

Query: 470 GFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRG 529
           GFP DLT  +A ERG  +D  GF  AM+E R+R+R A      G    D ++        
Sbjct: 402 GFPADLTNDVARERGFSIDEAGFEQAMEEQRQRAREA------GQFGTDYNSLIK----- 450

Query: 530 VLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEG 589
             AT+  F        +SV++ ++     + ++  G++  IVL ++ FYAE GGQ  D G
Sbjct: 451 -SATNTEFCGYTASRGQSVVREMFVEGAEVSTLSAGDKAIIVLDNTPFYAESGGQCGDTG 509

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
            ++   G F+V + Q  G  + H G L +G    + G++V   VD  RR  I+ NH+ TH
Sbjct: 510 VLKTDAGIFHVEDTQKLGNAIAHHGVLAQGV--LATGDQVDAIVDEKRRAAISLNHSATH 567

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +L+ ALR+VLG+HV QKGS+V  E LRFDFSH + + P  ++ +E +VN++I+   ++ +
Sbjct: 568 LLHAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTPAEIKEVERLVNQEIRHNHNIET 627

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
               + EAK   G  A+FGE Y D VRV+++G                  S ELCGG H 
Sbjct: 628 NIMNIDEAKA-KGAMALFGEKYDDQVRVLSMG----------------DFSTELCGGIHA 670

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKN 829
           SNT +   F ++SE GIA GIRRI AVT   A    +A  +           +  LLEK 
Sbjct: 671 SNTGDIGLFKIISEGGIAAGIRRIEAVTGEGALDYLDAQQAQHDAKVSEMAAKAKLLEK- 729

Query: 830 QVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQK 889
           ++++ + K+A      A + A    +    +G    ++++  G D  A+R  V  +  Q 
Sbjct: 730 EIQQLKDKLA------AKESAGLINQVKQISGVNVLVAQLN-GADNKALRGMVDDLKNQL 782

Query: 890 GMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQ 949
              +++   +    K  + AGV   +D + +++  E +      + G+ G G+  +A   
Sbjct: 783 SSGIIMLG-NVAEGKVGLIAGVT--NDLTNKVKAGELVNMVALQVGGK-GGGRPDMAQAG 838

Query: 950 GTDAAQVTPAMDLAAEFAAMKL 971
           GTDA  +  A++    + A +L
Sbjct: 839 GTDAHALPSALESVDAWIAERL 860


>gi|84390150|ref|ZP_00991412.1| alanyl-tRNA synthetase [Vibrio splendidus 12B01]
 gi|84376804|gb|EAP93679.1| alanyl-tRNA synthetase [Vibrio splendidus 12B01]
          Length = 860

 Score =  593 bits (1530), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 367/916 (40%), Positives = 513/916 (56%), Gaps = 90/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR+ F KFFE K H    SS +VP NDPTLLF NAGMNQ+K  FLG      +    +R
Sbjct: 7   EVRNAFLKFFESKEHQIVDSSSLVPHNDPTLLFTNAGMNQFKDCFLGA-----EKRAYSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK EAI +AWE LT+   L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEEAIGFAWEFLTETLGL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           P DRL  T +          D+EA DIW K   +PA +++  G K        DNFW MG
Sbjct: 122 PKDRLLVTVY--------ETDDEAFDIWNKKVGIPADKIVRIGDKEGGKKFESDNFWTMG 173

Query: 232 DTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
           DTGPCGPC+EI YD      G R        D    IEIWN VF+QFNR +DG+++PLP 
Sbjct: 174 DTGPCGPCTEIFYDHGEHIWGGRPGTP--EEDGDRFIEIWNNVFMQFNRHADGTMEPLPK 231

Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
             VDTG+G ER+++I+Q   SNY+ DVF  +  A  +          VG DD    + + 
Sbjct: 232 PAVDTGMGIERISAIMQGVHSNYEIDVFQKLIKATAEV---------VGHDDLS--NQSL 280

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RV+ADHIR+ SF IADG  P NEGR YVLRRI+RRAVR+G+++  AQ  FF+ LV ++ +
Sbjct: 281 RVIADHIRSCSFLIADGVMPSNEGRGYVLRRIIRRAVRHGNKI-GAQGVFFHKLVGVLAE 339

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWD 467
           VMG    ELK+++  + +++  EE +FG+TL +G+     A   ++GK L G+  F L+D
Sbjct: 340 VMGSAAEELKKQQELVEKVLRIEEENFGRTLERGMVILNDALDALEGKELDGETVFKLYD 399

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
           TYGFP DLT  +A ER   +D EGF  AM+  R+R+R A      G    D +AT     
Sbjct: 400 TYGFPADLTNDVARERDFTIDEEGFEKAMEAQRKRAREA------GQFGTDYNAT----- 448

Query: 528 RGVLATDDSFKFIWFQDHKSV--IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
              L  D + +F  +   +    I A++   E + S+  G++  I+L  + FYAE GGQ 
Sbjct: 449 ---LKVDTNTEFCGYTATEGAGEISALFVDGEEVPSLSAGDKAIIILEETPFYAESGGQC 505

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D G ++   G F V++ Q  G    H G L EG   F+ G++V   VD +RR  I+ NH
Sbjct: 506 GDAGTLKTASGLFKVQDTQKLGNAFAHHGELVEGV--FAQGDKVEAIVDAERRAAISLNH 563

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+L+ ALREVLG+HV QKGS+V P+ LRFDFS+ + V P  ++ +E +VN Q++   
Sbjct: 564 SATHLLHSALREVLGEHVAQKGSLVKPDNLRFDFSNLEAVTPAQIKEVERLVNAQVRKNH 623

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    +  AK   G  A+FGE Y D VRV+++G                  S ELCG
Sbjct: 624 VIETNIMDIESAKE-KGAMALFGEKYDDEVRVLSMGE----------------FSTELCG 666

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEA-ACSLEKEVDDASKIEGS 824
           G H SNT +   F + SE GIA GIRRI AVT   A  A EA A + E+++ +++K   S
Sbjct: 667 GIHASNTGDIGLFKITSEGGIAAGIRRIEAVTGEAALDAVEAQANAYEEKLAESAKKAKS 726

Query: 825 LLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLK 884
           L +  Q+ K +   AE         A    +    +G    ++ +E G D   +R  V  
Sbjct: 727 LEKDIQLLKEKMAAAES--------ANIMGKVEDISGTKVLVAAIE-GADNKNLRTMVDN 777

Query: 885 VIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGG 944
              Q G  +++ + +    K  + AGV +  D   +++  + +    + + G+ G G+  
Sbjct: 778 AKNQVGSGIILIA-NIADGKVGLIAGVTK--DLIGKVKAGDLVKMVAEQVGGKGG-GRPD 833

Query: 945 LASGQGTDAAQVTPAM 960
           +A   GTD   +  A+
Sbjct: 834 MAQAGGTDVEALPEAL 849


>gi|261346225|ref|ZP_05973869.1| alanine--tRNA ligase [Providencia rustigianii DSM 4541]
 gi|282565533|gb|EFB71068.1| alanine--tRNA ligase [Providencia rustigianii DSM 4541]
          Length = 875

 Score =  593 bits (1530), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 358/932 (38%), Positives = 529/932 (56%), Gaps = 85/932 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSK--L 119
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG       L K   
Sbjct: 7   EIRQAFLDFFHTKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLG-------LDKRAY 59

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           +RA   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI +AWELLT  +
Sbjct: 60  SRATTAQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIRFAWELLTSEQ 119

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFW 228
            + LP +RL+ T +        A D+EA DIW K +  PA R++  G         DNFW
Sbjct: 120 WFNLPKERLWVTVY--------ATDDEAYDIWNKEIGVPAERIIRIGDNKGAPYASDNFW 171

Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
           +MGDTGPCGPC+EI YD   +           D    IEIWN+VF+QFNR+SDG+++PLP
Sbjct: 172 QMGDTGPCGPCTEIFYDHGDHIWGGPPGTPEEDGDRYIEIWNLVFMQFNRQSDGTMEPLP 231

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
              VDTG+G ER++++LQ+  SNYD D+F  +  A  +ATGA   S K           +
Sbjct: 232 KPSVDTGMGLERISAVLQHVNSNYDIDIFRELIAAAAEATGATDLSNK-----------S 280

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            RV+ADHIR+ +F I+DG  P NEGR YVLRRI+RRAVR+G  +L A+D FF  LV  ++
Sbjct: 281 LRVIADHIRSCAFLISDGVIPSNEGRGYVLRRIIRRAVRHGY-MLGAKDTFFYKLVPTLI 339

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
           KVMG    EL++++A + +++  EE  F +TL +G++        ++G  L G+ AF L+
Sbjct: 340 KVMGTAADELQRQQAMVEKVLKTEEEQFARTLERGLQLLDDELASLKGDTLEGETAFRLY 399

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFPLDLT  +  ER + VD EGF  AM++ R R+R +    A      D +A   + 
Sbjct: 400 DTYGFPLDLTADVCRERNIKVDEEGFERAMEDQRRRARESSGFGA------DYNALIKVD 453

Query: 527 KRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           KR        F      + ++ I A+Y   + ++++  G E  ++L  ++FYAE GGQ+ 
Sbjct: 454 KRS------EFSGYQHDEQQATITALYKDGQPVDALNAGEEGLVILDKTAFYAESGGQVG 507

Query: 587 DEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
           D G +    G+F V + Q YG  + H+G +  G+    V   +  +V+ +RR  I  NH+
Sbjct: 508 DTGVLTNESGNFVVLDTQKYGQAIGHVGKVESGS--LVVNHRISARVNSERRNAIRLNHS 565

Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD 706
            TH+L+ ALR++LG+HV QKGS+V  + LRFDFSH + +  + LR++E IVN QI+   +
Sbjct: 566 ATHLLHAALRQILGEHVSQKGSLVNDKYLRFDFSHFEALTQQQLRQVEDIVNAQIRQNSE 625

Query: 707 VFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGG 766
           + ++   L  AK   G  A+FGE Y + VRV+++G                  S ELCGG
Sbjct: 626 IETELMDLEGAKA-KGAMALFGEKYEERVRVLSMG----------------DFSIELCGG 668

Query: 767 THLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEG-SL 825
           TH S T +   F++LSE G A G+RRI A T   A +   A       +    K +  SL
Sbjct: 669 THASRTGDIGLFSILSESGTAAGVRRIEATTGATAIEHLHAQSEQLSAIAHLLKGDANSL 728

Query: 826 LEK-----NQVRKAQKKVAE-ENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVR 879
           +EK     ++ R  +K++ + ++ Q + + A+  ++A    G    +S++    D   +R
Sbjct: 729 VEKVKAALDKSRNLEKEILQLKDQQASQESASLGSKAKDVKGIKLLVSQLN-DTDPKLLR 787

Query: 880 EAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCG 939
             V  +  Q    ++V ST  + +K  +  GV   +D + +++  + ++   Q + G+ G
Sbjct: 788 TMVDDLKNQLKSAIIVLST-TSGDKVSIIVGVT--NDLTAKIKAGDLVSYVAQQVGGKGG 844

Query: 940 KGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
            G+  +A   G+D   +  AM    ++   KL
Sbjct: 845 -GRPDMAMAGGSDVKALPTAMASVEQWVDSKL 875


>gi|386742556|ref|YP_006215735.1| alanyl-tRNA synthetase [Providencia stuartii MRSN 2154]
 gi|384479249|gb|AFH93044.1| alanyl-tRNA synthetase [Providencia stuartii MRSN 2154]
          Length = 876

 Score =  593 bits (1530), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 351/935 (37%), Positives = 525/935 (56%), Gaps = 90/935 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSK--L 119
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG       L K   
Sbjct: 7   EIRQAFLDFFHTKGHQVVSSSSLVPNNDPTLLFTNAGMNQFKDVFLG-------LDKRAY 59

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           +RA   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI +AWELLT  +
Sbjct: 60  SRATTAQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAINFAWELLTGKE 119

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFW 228
            + LP ++L+ T +          D+EA DIW K   +P  R++  G         DNFW
Sbjct: 120 WFNLPKEKLWVTVY--------ETDDEAYDIWHKEVGIPVDRIIRIGDNKGAPYASDNFW 171

Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
           +MGDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR+SDG+++PLP
Sbjct: 172 QMGDTGPCGPCTEIFYDHGEHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQSDGTMEPLP 231

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
              VDTG+G ER+ ++LQ+  SNYD D+F  +  A  +ATG+   S K           +
Sbjct: 232 KPSVDTGMGLERIAAVLQHVNSNYDIDIFQELIAAAAKATGSNDLSNK-----------S 280

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            RV+ADHIR+ +F ++DG  P NEGR YVLRRI+RRAVR+G  +L A+D FF  LV  ++
Sbjct: 281 LRVIADHIRSCAFLVSDGVIPSNEGRGYVLRRIIRRAVRHGY-MLGAKDTFFYKLVAPLI 339

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
            VMG    EL ++++ + +++  EE  F +TL +G++   +    ++G  L G+  F L+
Sbjct: 340 NVMGSAADELARQQSTVEKVLKTEEEQFARTLERGLQLLDEELAALKGDTLDGETVFRLY 399

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFP+DLT  +  ER + VD EGF  AM++ R R+R +           D ++   + 
Sbjct: 400 DTYGFPMDLTADVCRERNIKVDEEGFERAMEDQRRRARESS------GFGTDYNSLIKVE 453

Query: 527 KRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           K         F    + +  + I AIY   + ++S+  G E  ++L  ++FYAE GGQ+ 
Sbjct: 454 KHS------EFSGYAYNEQLATITAIYKNGQPVDSLNAGEEGLVILDKTAFYAESGGQVG 507

Query: 587 DEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
           D G +    GSF V + Q YG  + HIG +  G+    +   +  K+D +RR  I  NH+
Sbjct: 508 DTGLLRNDSGSFIVTDTQKYGQAIGHIGKVESGS--LVINHRIDAKIDVERRDAIRLNHS 565

Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD 706
            TH+L+ ALR+VLG+HV QKGS+V  + LRFDFSH + +    LR +E IVN QI+    
Sbjct: 566 ATHLLHAALRQVLGEHVSQKGSLVNDKYLRFDFSHFEAMTAAQLREVEDIVNAQIRKNTP 625

Query: 707 VFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGG 766
           + ++   L  AK   G  A+FGE Y + VRV+++G                  S ELCGG
Sbjct: 626 IETELMDLESAKA-KGAMALFGEKYEERVRVLSMGG---------------DFSIELCGG 669

Query: 767 THLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKI----E 822
           TH S T +   F +LSE G A G+RRI A T      A E+  S  ++++  + +     
Sbjct: 670 THASRTGDIGLFRILSESGTAAGVRRIEATT---GESALESVHSQSEQLNAIAHLLKGDM 726

Query: 823 GSLLEK-----NQVRKAQKKVAE-ENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            SL+EK      + R+ +K++ + ++ Q + + A+ +++A    G    +S++    +  
Sbjct: 727 SSLVEKVKSALEKSRQLEKEILQLKDQQASQESASLSSKAKDIKGVKLLVSQLN-NTEPK 785

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q    ++V ST  + +K  +  GV   +D + +++  + ++   Q + G
Sbjct: 786 LLRTMVDDLKNQLKSAIIVLST-TSGDKVSIIVGVT--NDLTAKIKAGDLISYVAQQVGG 842

Query: 937 RCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           + G G+  +A   GTD + +  AM    ++ + +L
Sbjct: 843 KGG-GRPDMAQAGGTDVSALPTAMASVEDWVSSRL 876


>gi|380693755|ref|ZP_09858614.1| alanyl-tRNA synthetase [Bacteroides faecis MAJ27]
          Length = 872

 Score =  593 bits (1530), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 328/747 (43%), Positives = 445/747 (59%), Gaps = 61/747 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++RD+F  FFE K H    S+P+V  +DPTL+F NAGMNQ+K I LG        +K 
Sbjct: 4   AKEIRDSFKNFFESKGHHIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGN-----HPAKY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           TR  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWE L +V 
Sbjct: 59  TRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAINWAWEYLVEVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +L  + LYAT F G  + GL+ D+EA   W +FLP   ++     DNFWEMGDTGPCGPC
Sbjct: 119 KLNPEHLYATVFEGSPEEGLSRDDEAASYWEQFLPKDHIINGNKHDNFWEMGDTGPCGPC 178

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + A      LVN+D P  IEIWN+VF+Q+NR++DGSL+PLPAK +DTG+
Sbjct: 179 SEIHIDLRPAEERAKISGRDLVNHDHPQVIEIWNLVFMQYNRKADGSLEPLPAKVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF P+  AI    G      + G D   + D+A RV+ADHI
Sbjct: 239 GFERLCMALQGKTSNYDTDVFQPMLKAIAAIAGT-----EYGKD--KQQDIAMRVIADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++F+I DG  P N    YV+RRILRRAVRYG   L  +  F   L+ +++  MGD +P
Sbjct: 292 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQSFMYKLLPVLIDNMGDAYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ--GKV-LSGQDAFILWDTYGF 471
           EL  ++  I ++I  EE +F +TL  GI    K  +D +  GK  +SG+DAF L+DT+GF
Sbjct: 352 ELIAQKGLIEKVIKEEEEAFLRTLETGIRLLDKTMEDTKAAGKTEISGKDAFTLYDTFGF 411

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E G+ V++E FN  M + ++R+R+A   + G  + +    T  +   G  
Sbjct: 412 PLDLTELILRENGMTVNLEEFNEEMQQQKQRARNAAAVETGDWVTLREGTTEFV---GYD 468

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            T+     + ++  K   + +Y                IVL  + FYAE GGQI D G +
Sbjct: 469 YTEYEASILRYRQIKQKNQTLYQ---------------IVLDYTPFYAESGGQIGDTGVL 513

Query: 592 EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHML 651
              F +  V + +      IHI   T+          + C VD DRR   A NH+ TH+L
Sbjct: 514 VSEFETIEVIDTKKENNLPIHI---TKKLPEHPEAPMMAC-VDTDRRAACAANHSATHLL 569

Query: 652 NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS-K 710
           + ALREVLG+H++QKGS+V P+ LRFDFSH + V  E +R++E +VN +I+A + +   +
Sbjct: 570 DSALREVLGEHIEQKGSLVTPDSLRFDFSHFQKVTDEEIRKVEHLVNAKIRANIPLKEYR 629

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
              + EAK +  + A+FGE Y + VRV+  G                  S E CGG H++
Sbjct: 630 NIPIEEAKELGAI-ALFGEKYGERVRVIQFGS-----------------SIEFCGGIHVA 671

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVT 797
            T       ++SE  +A G+RRI A T
Sbjct: 672 ATGNIGMIKIVSESSVAAGVRRIEAYT 698


>gi|171915187|ref|ZP_02930657.1| alanyl-tRNA synthetase [Verrucomicrobium spinosum DSM 4136]
          Length = 917

 Score =  593 bits (1530), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 380/951 (39%), Positives = 525/951 (55%), Gaps = 89/951 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPV-VPVNDPTLLFANAGMNQYKPIFLGT--ADPNTQL 116
           + ++R +F  FF++K H    S  V     D   +F NAGMNQ+ PIFLG   AD +T  
Sbjct: 3   SAQIRQSFLDFFKEKQHTIVPSDNVGYTSRDGARIFTNAGMNQFVPIFLGERPADVDTWP 62

Query: 117 SKL-----TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWA 171
             L     TRA +TQKCIRAGGKHNDL+DVG DTYHHTFFEMLGNWSFGDYFK +AI WA
Sbjct: 63  GVLHKGLPTRAADTQKCIRAGGKHNDLEDVGLDTYHHTFFEMLGNWSFGDYFKKDAISWA 122

Query: 172 WELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWL-KFL-----PASRVLPFGCKD 225
           WEL+ + ++ P  R++AT +   E      D E+   W  KF      P   ++    KD
Sbjct: 123 WELVIERWKFPPTRVFATIYQPGEGDPAERDEESWGYWAEKFRSVGLDPEIHIVNGNKKD 182

Query: 226 NFWEMGDTGPCGPCSEIHYDRTG---------NRDAASLVNNDDPTCIEIWNIVFIQFNR 276
           NFW M +TGPCGPC+EIH D T           R+ A LVN     CIEIWN VFIQ+N 
Sbjct: 183 NFWMMAETGPCGPCTEIHIDLTPGPRDLDEGRQREGAKLVNGSSADCIEIWNNVFIQYNA 242

Query: 277 ESDGSLKPLPAKHVDTGLGFERLTSILQN----------KMSNYDTDVFMPIFDAIQQAT 326
            +D +   LPA+HVDTG+GFER+TSI+Q           K+SNYDTDVF PIFD I + +
Sbjct: 243 NADKTFSKLPAQHVDTGMGFERVTSIIQGTRNFTDFENAKISNYDTDVFKPIFDEISKMS 302

Query: 327 GAR-----PYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILR 381
           G       P SG  G  + +K+D+A+RV+ADHIRTLSF+IADG  PGN  R Y LRRILR
Sbjct: 303 GKTYASTLPASGSTGDTEQEKIDVAFRVLADHIRTLSFSIADGISPGNNDRNYTLRRILR 362

Query: 382 RAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKG 441
           RAV+YG   L  ++ FF  LV+++ + MG+VFPEL+ R+ H++ ++  EE SF +TL +G
Sbjct: 363 RAVKYG-RTLGFKEPFFYKLVDVLAQHMGEVFPELRARKEHVKSVLKMEEESFNRTLDRG 421

Query: 442 IEKFKKAAQDVQGK--VLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEA 499
           I  F+  A  + GK   ++G+ AF L DT+GFP+DLTQL+A ERGL VD+  +   +  A
Sbjct: 422 ISLFESEADKLAGKGTEITGEVAFRLSDTFGFPIDLTQLLARERGLTVDVPEYERLL--A 479

Query: 500 RERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFI 559
            ++ RS ++ +    +V  ++          + T +  KFI + + ++  K        +
Sbjct: 480 EQKKRSTEDSKGRKQVVSLSE----------IETKEPTKFIGYDNLEAPAKV-------L 522

Query: 560 ESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEG 619
           E V   ++  +VL SS FYAE GGQ+ D G +     SF + N Q  G   +H     +G
Sbjct: 523 EVVSMKDKTAVVLDSSPFYAEMGGQVGDSGALIIGADSFPISNTQKVGNTWLH---FLDG 579

Query: 620 AGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDF 679
               SVG E    V+  RR+ I  +HT TH++++AL EV+     QKGS V P+KL FDF
Sbjct: 580 EDTPSVGVEAQLAVEPSRRRAIERHHTVTHIMHWALHEVVSKEATQKGSFVGPDKLTFDF 639

Query: 680 SHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVA 739
           +    +    L  IE +VNE+I A   V   E   AE K   G+  +FGE Y D VRVV 
Sbjct: 640 NSA-ALTAAQLADIERLVNERIVANDVVSWDELPYAEVKSNPGIMQLFGEKYGDKVRVVQ 698

Query: 740 IGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTG 799
           +G +   L            S ELCGGTH  +T E   F L+SE  ++ G+RR+ A+   
Sbjct: 699 VGGQAHALNG---------YSMELCGGTHTRSTGEIGLFRLVSESAVSAGVRRLEAIAGL 749

Query: 800 LAYKAFEAACSLEKEVDDASKIEGSL-LEKN-QVRKAQKKVAEENLQKAVKVATETAEAA 857
            AY+A  +   L K +      +G+L LEK  +    Q+K  E+ L+ A +        A
Sbjct: 750 EAYRAARSDADLLKLLAGKVLAQGTLDLEKKIETLLDQQKALEKALKSAQQREAAARAKA 809

Query: 858 ----ASNGKPFCISRVEVGLD-AAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVP 912
               ASN      +  EV  D A AV +A+  +       ++V +     N +++     
Sbjct: 810 LLGLASN-DAIIANLGEVDGDYAMAVSDALKSLFSG----IVVVAGTAGGNVSLIAT--- 861

Query: 913 EKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLA 963
              D   +L+  + +  A+ P+ G  G GK   A G G + A+V  A+D A
Sbjct: 862 VSKDHQAKLQAGK-IIQAIAPIVGGKGGGKPDFARGGGKEVAKVDAALDEA 911


>gi|56414779|ref|YP_151854.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|197363707|ref|YP_002143344.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|59798481|sp|Q5PF17.1|SYA_SALPA RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|56129036|gb|AAV78542.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|197095184|emb|CAR60735.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
          Length = 876

 Score =  593 bits (1529), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 355/916 (38%), Positives = 513/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT    +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+E  +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ETDDETYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  + +A+ + TGA     K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIEAVAKVTGATDLGNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F +ADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  +++V
Sbjct: 283 VIADHIRSCAFLVADGVLPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIEV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    ELK+++A + +++  EE  F +TL +G+    +    +QG  L G+ AF L+DT
Sbjct: 342 MGSAGEELKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERNIKVDEVGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + +E++  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   +F V + Q YG  + HIG L+ GA    VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGAGFTFAVDDTQKYGQAIGHIGKLSAGA--LKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + P  +R++E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVAQKGSLVSDKVLRFDFSHNEAMKPSEIRQVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLDAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A GIRRI AVT   A     A      ++         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGIRRIEAVTGEGAMATVHAQSDRLNDIAHLLKGDSQN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
              K+   L    Q+ K  +++ ++    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LGDKVRAVLERTRQLEKELQQLKDQ--AAAQESANLSSKAVDLNGVKLLVSEL-AGIEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q    V+V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLVSTVIVLAT-VVEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|373110940|ref|ZP_09525202.1| alanyl-tRNA synthetase [Myroides odoratimimus CCUG 10230]
 gi|371641816|gb|EHO07396.1| alanyl-tRNA synthetase [Myroides odoratimimus CCUG 10230]
          Length = 875

 Score =  593 bits (1529), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 345/838 (41%), Positives = 475/838 (56%), Gaps = 68/838 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R  F  FFE++ H+   S+P+V  +DPTL+F N+GM Q+K  FLG A P     K 
Sbjct: 3   SQEIRQKFLNFFEERGHMVVPSAPIVLKDDPTLMFNNSGMAQFKEYFLGNAKP-----KS 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  +TQKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWELLT+VY
Sbjct: 58  NRITDTQKCLRVSGKHNDLEEVGIDTYHHTMFEMLGNWSFGDYFKKEAINWAWELLTEVY 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
            +P D LY T F G E+  +  D EA DIW   +   R+L    KDNFWEMGD GPCGPC
Sbjct: 118 NIPKDILYVTVFEGSEEENVPFDQEAYDIWSTLIGKDRILMGNKKDNFWEMGDQGPCGPC 177

Query: 240 SEIHYDRTGNRDAA-----SLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           +EIH D     + A      LVN D P  +EIWN VF++FNR++DGSL+ LPA+HVDTG+
Sbjct: 178 TEIHVDIRSAEEKAKIAGRELVNGDHPQVVEIWNNVFMEFNRKADGSLEKLPAQHVDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL  +LQ   SNYDTDVF P+   + + TG + Y+ K   D+ +K+++A RV+ DH+
Sbjct: 238 GFERLCMVLQGVQSNYDTDVFSPLIAKVSELTGGK-YTMKAKDDEEEKINIAIRVIVDHV 296

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R ++FAIADG  P N G  YV+RRILRRA+RY    L  ++ F   LV ++   MG  FP
Sbjct: 297 RAVAFAIADGQLPSNNGAGYVIRRILRRAIRYAFTFLDKKEPFIYELVEVLSTQMGAFFP 356

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLD 474
           E+  ++  ++ +I  EE SF +TL +G+       +  +GKV+SG  AF L+DT+GFP+D
Sbjct: 357 EITSQKELVKNVIKEEETSFLRTLEQGLHLLDNVIKQTEGKVVSGVKAFELYDTFGFPID 416

Query: 475 LTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATD 534
           LT L+  E+G  +D  GF+ AM E + RSR+A         V   D T       VL + 
Sbjct: 417 LTALILREKGYELDEAGFDAAMLEQKTRSRAASE-------VSTDDWT-------VLVSG 462

Query: 535 DSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGL 594
           +  +F+ +   ++ +K   T    I+S   G    IVL S+ FY E GGQ+ D G +   
Sbjct: 463 NVEQFVGYDQLENEVK--ITRYRKIDSKKDGKLFQIVLDSTPFYPEGGGQVGDTGILVSA 520

Query: 595 FGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFA 654
             +  V + +     ++HI          +V   ++ KVD + RK    NH+ TH+L+ A
Sbjct: 521 NDTIQVIDTKKENNLILHIVRELPA----NVEGTLVAKVDVEARKQSMANHSATHLLHQA 576

Query: 655 LREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATL 714
           LR +LG HV+QKGS+V P  LRFDFSH   V  E L ++E  VN++I   L +  + +  
Sbjct: 577 LRTILGTHVEQKGSLVAPTHLRFDFSHFSKVTEEELAQVEVFVNDRIHDHLPLVERRSIP 636

Query: 715 AEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTRE 774
                  G  A+FGE Y D VR +  G                  S ELCGGTH+ NT +
Sbjct: 637 MAQAIAEGAMALFGEKYGDEVRAIKFGE-----------------SMELCGGTHVGNTSD 679

Query: 775 AEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKNQVRKA 834
              F ++SE  +A GIRRI A+T   A + +     +E+E D   +++  L       KA
Sbjct: 680 IWQFKIVSEGAVAAGIRRIEAITNKAARQFY-----VEQE-DTLKELKAVLKNPQDTLKA 733

Query: 835 QKKVAEENLQKAVKVATETAEAAAS------------NGKPFCISRVEVGLDAAAVRE 880
              + +EN +   +V     E A +            NG  F    VEV LDAA  ++
Sbjct: 734 VVSLQDENAKLKKQVEQLLKEKAKNLKGDLKGQIQEVNGISFL--AVEVDLDAAGAKD 789


>gi|237729651|ref|ZP_04560132.1| alanyl-tRNA synthetase [Citrobacter sp. 30_2]
 gi|226908257|gb|EEH94175.1| alanyl-tRNA synthetase [Citrobacter sp. 30_2]
          Length = 875

 Score =  593 bits (1529), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 357/915 (39%), Positives = 513/915 (56%), Gaps = 89/915 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT    +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQYAWELLTGENWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAAYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSAEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNY+ D+F  + +++ + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYEIDLFRSLIESVAKVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A+D FF  LV  +V V
Sbjct: 283 VIADHIRSCAFLIADGVVPSNENRGYVLRRIIRRAVRHGN-MLGAKDTFFYKLVGPLVDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    ELK+++  + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGEELKRQQVMVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A +   
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNAMIRVD 453

Query: 529 GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDE 588
           G       FK     +    + A++   + ++++  G +  +VL  + FYAE GGQ+ D+
Sbjct: 454 GA----SEFKGYEHLELNGKVTALFVDGKAVDAINAGQDAVVVLDQTPFYAESGGQVGDK 509

Query: 589 GFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
           G ++G   +F V + Q YG  + HIG L+  AG   +G+ V   VD  RR  I  NH+ T
Sbjct: 510 GELKGAGFAFAVSDTQKYGQAIGHIGKLS--AGSLKIGDAVQADVDEARRARIRLNHSAT 567

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+++ ALR+VLG HV QKGS+V  + LRFDFSH + + P  +R +E +VN QI+  L + 
Sbjct: 568 HLMHAALRQVLGTHVAQKGSLVNDKLLRFDFSHTEAMKPAEIRAVEDLVNAQIRRNLPIE 627

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
           +    L  AK   G  A+FGE Y D VRV+++G                  S ELCGGTH
Sbjct: 628 TNIMDLEAAKA-KGAMALFGEKYDDHVRVLSMG----------------DFSTELCGGTH 670

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEG----- 823
            S T +   F ++SE G A G+RRI AVT   A +   A    ++  D A  ++G     
Sbjct: 671 ASRTGDIGLFRIVSESGTAAGVRRIEAVTGEGAIQTVHAES--DRLSDVAQLLKGDSQNI 728

Query: 824 -----SLLEKNQVRKAQKKVAEENLQKAVK-VATETAEAAASNGKPFCISRVEVGLDAAA 877
                S+LE+   R+ +K++ +   Q A +  A  +++A   NG    +S +   ++   
Sbjct: 729 GDKVRSVLER--TRQLEKELQQLKEQAAAQESANLSSKAVDINGVKLLVSEL-ADVEPKM 785

Query: 878 VREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGR 937
           +R  V  +  Q G  V+V +T     K  + AGV +  D + +++  E +    Q + G+
Sbjct: 786 LRTMVDDLKNQLGSTVIVLAT-VVEGKVSLIAGVSK--DVTDRVKAGELVGMVAQQVGGK 842

Query: 938 CGKGKGGLASGQGTD 952
            G G+  +A   GTD
Sbjct: 843 GG-GRPDMAQAGGTD 856


>gi|197249925|ref|YP_002147723.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
 gi|440764321|ref|ZP_20943350.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Agona str. SH11G1113]
 gi|440770300|ref|ZP_20949252.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Agona str. SH08SF124]
 gi|440773002|ref|ZP_20951903.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Agona str. SH10GFN094]
 gi|197213628|gb|ACH51025.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
 gi|436412130|gb|ELP10074.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Agona str. SH08SF124]
 gi|436416901|gb|ELP14802.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Agona str. SH11G1113]
 gi|436417367|gb|ELP15262.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
           Agona str. SH10GFN094]
          Length = 876

 Score =  593 bits (1529), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 355/916 (38%), Positives = 513/916 (56%), Gaps = 91/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT    +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  + +A+ + TGA     K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIEAVAKVTGATDLGNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F +ADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  +++V
Sbjct: 283 VIADHIRSCAFLVADGVLPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIEV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    ELK+++A + +++  EE  F +TL +G+    +    +QG  L G+ AF L+DT
Sbjct: 342 MGSAGEELKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A            AD  A     
Sbjct: 402 YGFPVDLTADVCRERKIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA----- 448

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + +F  + DH  +   + A++   + +E +    E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVEVINAEQEAVVVLDQTPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++G   +F V + Q YG  + HIG L+ GA    VG+ V   VD  RR  I  NH
Sbjct: 507 GDKGELKGAGFTFAVDDTQKYGQAIGHIGKLSAGA--LKVGDAVQADVDEARRARIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + P  +R++E +VN QI+  L
Sbjct: 565 SATHLMHAALRQVLGTHVAQKGSLVSDKVLRFDFSHNEAMKPSEIRQVEDLVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L  A+   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLDAARA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------D 816
           GTH S T +   F ++SE G A GIRRI AVT   A     A      ++         +
Sbjct: 668 GTHASRTGDIGLFRIISESGTAAGIRRIEAVTGEGAMATVHAQSDRLNDIAHLLKGDSQN 727

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
              K+   L    Q+ K  +++ ++    A + A  +++A   NG    +S +  G++  
Sbjct: 728 LGDKVRAVLERTRQLEKELQQLKDQ--AAAQESANLSSKAVDLNGVKLLVSEL-AGIEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  V+V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSTVIVLAT-VVEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTD 952
           + G G+  +A   GTD
Sbjct: 842 KGG-GRPDMAQAGGTD 856


>gi|149190613|ref|ZP_01868882.1| alanyl-tRNA synthetase [Vibrio shilonii AK1]
 gi|148835611|gb|EDL52579.1| alanyl-tRNA synthetase [Vibrio shilonii AK1]
          Length = 861

 Score =  593 bits (1529), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 366/916 (39%), Positives = 509/916 (55%), Gaps = 89/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR+ F KFFE K H    SS +VP +DPTLLF NAGMNQ+K  FLG    N      TR
Sbjct: 7   EVRNAFLKFFESKGHQIVDSSSLVPHDDPTLLFTNAGMNQFKDCFLGLEKRN-----YTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT+  +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAISFAWEFLTETLKL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFGCK--------DNFWEMG 231
           P DRL  T +          D+EA +IW K +  PA R++  G K        DNFW+MG
Sbjct: 122 PKDRLLVTVY--------ETDDEAFEIWNKQIGVPADRIVRIGDKKGGKPYESDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
           DTGPCGPC+EI YD      G R        D    IEIWN VF+QFNR  DG+++PLP 
Sbjct: 174 DTGPCGPCTEIFYDHGEHIWGGRPGTP--EEDGDRFIEIWNNVFMQFNRHVDGTMEPLPK 231

Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
             VDTG+G ER+++I+Q   SNY+ DVF  +  A  +  G +  S           + + 
Sbjct: 232 PSVDTGMGIERISAIMQGVHSNYEIDVFQTLIKAAAEVIGYQDLS-----------NQSL 280

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RV+ADHIR+ SF I DG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF+ LV  +  
Sbjct: 281 RVIADHIRSCSFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGAFFHKLVGTLAS 339

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKVLSGQDAFILW 466
           VMG    ELK+++A + +++  EE +FG+TL +G+    +A  ++   KVL G+  F L+
Sbjct: 340 VMGSAGEELKKQQAVVEKVLRIEEENFGRTLERGMTILTEALDNLGDEKVLDGETVFKLY 399

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFP DLT  +A ER   +D EGF  AM+  R+R+R A             D  AA+ 
Sbjct: 400 DTYGFPADLTNDVAREREFTIDEEGFEKAMEAQRQRAREAGQ--------FGTDYNAAIK 451

Query: 527 KRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
               + TD  F      +  S + A++     ++++  G++  +VL  + FYAE GGQ  
Sbjct: 452 ----VDTDTEFCGYTGTEGSSSVAAMFVEGAEVDALSAGDKAIVVLEQTPFYAESGGQCG 507

Query: 587 DEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
           D G ++   G F V + Q  G  + H G L EG    + G+EV   VD  RR  I+ NH+
Sbjct: 508 DAGVLKTAAGLFKVEDTQKLGNAIAHHGELVEGV--LAKGDEVDAIVDAQRRAAISLNHS 565

Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD 706
            TH+L+ ALR+VLG+HV QKGS+V P+ LRFDFSH + +    ++ +E +VN QI+    
Sbjct: 566 ATHLLHAALRQVLGEHVTQKGSLVKPDNLRFDFSHLEAMTKAEIKEVERLVNAQIRTNHV 625

Query: 707 VFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGG 766
           + +    +  AK   G  A+FGE Y D VRV+++G                  S ELCGG
Sbjct: 626 IETNVMDIESAKA-KGAMALFGEKYDDEVRVLSMG----------------DFSTELCGG 668

Query: 767 THLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSL--EKEVDDASKIEGS 824
            H SNT +   F + SE GIA GIRRI AVT   A  A EA  S   EK  D ASK +  
Sbjct: 669 IHASNTGDIGLFKITSEGGIAAGIRRIEAVTGEAALDAIEAQASQYEEKLTDAASKAKS- 727

Query: 825 LLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLK 884
            LEK ++++ + K+A      AV+ A    +     G    ++ +E G D+  +R  +  
Sbjct: 728 -LEK-EIQQLKDKLA------AVESANIMGKVEEIAGTQVLVAALE-GADSKNLRTMMDN 778

Query: 885 VIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGG 944
              Q G  +  F  +    K  + AGV +  D + +++  + +    + + G+ G G+  
Sbjct: 779 AKNQMGSGI-AFIANVADGKIGLIAGVTK--DLTGKVKAGDLVKMVAEQVGGKGG-GRPD 834

Query: 945 LASGQGTDAAQVTPAM 960
           +A   G+D   +  A+
Sbjct: 835 MAQAGGSDVEALPEAL 850


>gi|325285608|ref|YP_004261398.1| alanyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
 gi|324321062|gb|ADY28527.1| alanyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
          Length = 871

 Score =  593 bits (1529), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 358/867 (41%), Positives = 485/867 (55%), Gaps = 74/867 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R  F +FF++K H    S+P+V  +DPTL+F NAGMNQ+K  FLG  +     +K 
Sbjct: 3   SQEIRSQFLEFFKNKTHKIVSSAPMVIKDDPTLMFTNAGMNQFKEFFLGNTE-----AKN 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           TR  +TQKC+R  GKHNDL++VGKDTYHHT FEMLGNWSFGDYFK +AI WAWELLTKV+
Sbjct: 58  TRVVDTQKCLRVSGKHNDLEEVGKDTYHHTMFEMLGNWSFGDYFKEDAISWAWELLTKVF 117

Query: 180 RLPADRLYATYF-GGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGP 238
           ++    LY T F G  +K  L  D EA D+W K +P S++L    KDNFWEMGD GPCGP
Sbjct: 118 KIDESSLYVTVFEGSKDKDNLEMDQEALDLWKKIIPESQILFGNKKDNFWEMGDQGPCGP 177

Query: 239 CSEIHYD-RTGNRDA----ASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTG 293
           CSEIH D R+    A    A LVN D P  +EIWN+VF+Q+NR+++G L+ LPAKHVDTG
Sbjct: 178 CSEIHVDIRSAEEKAKVSGAELVNMDHPQVVEIWNLVFMQYNRKANGELENLPAKHVDTG 237

Query: 294 LGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADH 353
           +GFERL  ++Q   SNYDTDVF PI   I+  T A         +  +  ++A RV+ADH
Sbjct: 238 MGFERLCMVMQGVQSNYDTDVFTPIIREIETITNAE-------YNKNEDTNIAIRVIADH 290

Query: 354 IRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVF 413
           IR ++F+IADG  P N G  YV+RRILRRA+RYG   L  ++ F   LVN++   MGD F
Sbjct: 291 IRAVAFSIADGQLPSNTGAGYVIRRILRRAIRYGFTFLNTKEPFMYRLVNVLTNTMGDAF 350

Query: 414 PELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPL 473
           PELK+++  I  ++  EE SF KTL +G+            K + G+ AF L+DTYGFP+
Sbjct: 351 PELKEQKQLIENVVKEEEHSFLKTLDQGLVLLDSVINSASSKTIDGRKAFELYDTYGFPI 410

Query: 474 DLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLAT 533
           DLT L+  ERG  +D +GF+ AM E + RSRSA         V+  DA        VL T
Sbjct: 411 DLTALILSERGYTLDEKGFDAAMQEQKNRSRSASEVSKEDWEVLLQDAEQEFVGYDVLET 470

Query: 534 DDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEG 593
           +   + + ++               + S   G +  +V   + FYAE GGQ+ D+G++E 
Sbjct: 471 N--VRLVKYRK--------------VTSKKEGKQYQLVFNITPFYAEGGGQVGDKGYLEA 514

Query: 594 LFGS-FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICK--VDYDRRKLIAPNHTCTHM 650
             G   Y+ + +     +IH       A         I K  VD  +R+  A NHT TH+
Sbjct: 515 QNGDVVYILDTKKENNEIIHF------AKNLPKNTTDIFKAVVDVKQRQRTASNHTATHL 568

Query: 651 LNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSK 710
           L+ ALREVLG HV+QKGS V  + LRFDFSH   V  E L+ +E  VN +I+  L +  K
Sbjct: 569 LHQALREVLGTHVEQKGSAVHSKYLRFDFSHFSKVTTEQLKEVEDFVNARIEGNLPLEEK 628

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
                +     G  A+FGE Y D VR++  G+                 S ELCGGTH+ 
Sbjct: 629 RNIPMQEALDAGAMALFGEKYGDTVRLIRFGQ-----------------SVELCGGTHVQ 671

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEA----ACSLEKEV----DDASKIE 822
           NT +   F + SE  +A GIRRI A+T+  A K F A      +  KEV     D  K  
Sbjct: 672 NTGDIWHFKIKSEGAVASGIRRIEAITSD-AVKDFYADNNEVLTDIKEVLNNAKDPVKAV 730

Query: 823 GSLLEKNQVRKAQKKVAEENLQKAVKVATETA-EAAASNGKPFCISRVEVGLDAAAVREA 881
            SL E+N   K +K++ +    KA  +  +   E    NG  F   +V+  LD A +++ 
Sbjct: 731 VSLQEENN--KLKKEIEQLLKDKAKNLKGDLLNELQDVNGVQFLAKKVD--LDPAGIKDL 786

Query: 882 VLKVIEQKGMPVMVFSTDETTNKAVVC 908
              +        ++F  +      + C
Sbjct: 787 CFNMGANATNMFLLFGAENNGKATLSC 813


>gi|153802555|ref|ZP_01957141.1| alanyl-tRNA synthetase [Vibrio cholerae MZO-3]
 gi|124121918|gb|EAY40661.1| alanyl-tRNA synthetase [Vibrio cholerae MZO-3]
          Length = 860

 Score =  593 bits (1529), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 359/922 (38%), Positives = 514/922 (55%), Gaps = 80/922 (8%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR  F  FFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGL-----EKRTYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI++AWE LT V +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           P +RL  T +          D+EA DIW K   +PA R++  G K        DNFW+MG
Sbjct: 122 PKERLLVTVY--------ETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKH 289
           DTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG+++PLP   
Sbjct: 174 DTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPS 233

Query: 290 VDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRV 349
           VDTG+G ER+++I+Q   SNY+ DVF  +  A   A G +           D  + + RV
Sbjct: 234 VDTGMGIERISAIMQGVHSNYEIDVFQTLIKAAADAIGYQ-----------DLTNQSLRV 282

Query: 350 VADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVM 409
           VADHIR+ +F I DG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF+ LV  + +VM
Sbjct: 283 VADHIRSCAFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGAFFHKLVGPLAEVM 341

Query: 410 GDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTY 469
           G    ELK+++A + +++  EE +FG+TL +G+     A   + G VL G+  F L+DTY
Sbjct: 342 GTAGVELKKQQALVEKVLRIEEENFGRTLDRGMSILNDALDQLSGLVLDGETVFKLYDTY 401

Query: 470 GFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRG 529
           GFP DLT  +A ERG  +D  GF  AM+E R+R+R A      G    D ++        
Sbjct: 402 GFPADLTNDVARERGFSIDEAGFEQAMEEQRQRAREA------GQFGTDYNSLIK----- 450

Query: 530 VLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEG 589
             AT+  F        +SV++ ++     + ++  G++  IVL ++ FYAE GGQ  D G
Sbjct: 451 -SATNTEFCGYTASRGQSVVREMFVEGAEVSALSAGDKAIIVLDNTPFYAESGGQCGDTG 509

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
            ++   G F+V + Q  G  + H G L +G    + G++V   VD  RR  I+ NH+ TH
Sbjct: 510 VLKTDAGIFHVEDTQKLGNAIAHHGVLAQGV--LATGDQVDAIVDEKRRAAISLNHSATH 567

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +L+ ALR+VLG+HV QKGS+V  E LRFDFSH + + P  ++ +E +VN++I+   ++ +
Sbjct: 568 LLHAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTPAEIKEVERLVNQEIRHNHNIET 627

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
               + EAK   G  A+FGE Y D VRV+++G                  S ELCGG H 
Sbjct: 628 NIMNIDEAKA-KGAMALFGEKYDDQVRVLSMG----------------DFSTELCGGIHA 670

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKN 829
           SNT +   F ++SE GIA GIRRI AVT   A    +A  +           +  LLEK 
Sbjct: 671 SNTGDIGLFKIISEGGIAAGIRRIEAVTGEGALDYLDAQQAQHDAKVSEMAAKAKLLEK- 729

Query: 830 QVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQK 889
           ++++ + K+A +     +    + A      G    ++++  G D  A+R  V  +  Q 
Sbjct: 730 EIQQLKDKLAAKESAGLINQVKQIA------GVNVLVAQLN-GADNKALRGMVDDLKNQL 782

Query: 890 GMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQ 949
              +++   +    K  + AGV   +D + +++  E +      + G+ G G+  +A   
Sbjct: 783 SSGIIMLG-NVAEGKVGLIAGVT--NDLTNKVKAGELVNMVALQVGGK-GGGRPDMAQAG 838

Query: 950 GTDAAQVTPAMDLAAEFAAMKL 971
           GTDA  +  A++    + A +L
Sbjct: 839 GTDAHALPSALESVDAWIAERL 860


>gi|421615629|ref|ZP_16056651.1| alanyl-tRNA ligase [Pseudomonas stutzeri KOS6]
 gi|409782433|gb|EKN61994.1| alanyl-tRNA ligase [Pseudomonas stutzeri KOS6]
          Length = 828

 Score =  593 bits (1529), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 352/851 (41%), Positives = 485/851 (56%), Gaps = 84/851 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F +FFE+K H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLRFFEEKGHTRVASSSLIPANDPTLLFTNAGMNQFKDCFLGL-----EKRAY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           TRA  +QKC+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT  K
Sbjct: 58  TRATTSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAITYAWEFLTSEK 117

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFW 228
              LP ++L+ T +        A D+EA DIW K   +PA R++  G         DNFW
Sbjct: 118 WLNLPKEKLWVTVY--------ASDDEAYDIWTKEVGVPAERMVRIGDNKGAPYASDNFW 169

Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
            MGDTGPCGPC+EI +D   +           D    IEIWN VF+QFNR +DG + PLP
Sbjct: 170 AMGDTGPCGPCTEIFFDHGEHIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVMHPLP 229

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
           A  VDTG+G ER++++LQ+  SNY+ D+F  + +A  +A G R           ++   +
Sbjct: 230 APSVDTGMGLERISAVLQHVNSNYEIDLFQSLLNAAAEAIGCR-----------NEGQAS 278

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            +VVADHIR+  F IADG  P NEGR YVLRRI+RRA R+G++ L A+  FF+ +V  + 
Sbjct: 279 LKVVADHIRSCGFLIADGVTPSNEGRGYVLRRIIRRACRHGNK-LGAKGSFFHRIVTALA 337

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
             MGD FPELKQ++AHI  ++  EE  F KTL +G++  ++    + G V+ G+  F L+
Sbjct: 338 AEMGDAFPELKQQQAHIERVLKNEEEQFAKTLEQGLKILEQDLAGLAGSVIPGEVVFKLY 397

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFP+DLT  +A ER L +D  GF   M   RER+RSA       A  MD ++     
Sbjct: 398 DTYGFPVDLTGDIARERNLTLDEAGFEREMQAQRERARSAS------AFGMDYNS----- 446

Query: 527 KRGVLATDDSFKFIWFQ--DHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
              ++  +   +F  +Q       + A++     ++S+  G E  +VL  + FYAE GGQ
Sbjct: 447 ---LVKVEGETRFTGYQGTSGNGKVLALFKEGVVVDSLSAGEEGVVVLDQTPFYAESGGQ 503

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           I D G++E     F VR+    GG  +H G L  G  R  VG EV   VD   R+  A N
Sbjct: 504 IGDCGYLEAQGLRFDVRDTSKAGGAFLHHGILDSGTLR--VGAEVEATVDSSVRQATALN 561

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ ALRE+LG+HV QKGS+V  ++LRFDFSH + + PE LR +E  VN +I+  
Sbjct: 562 HSATHLLHAALREILGEHVSQKGSLVDSQRLRFDFSHFEAIRPEQLRALEDRVNAEIRRN 621

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
             V  +E  +  AK   G  A+FGE Y D VRV+ +G                  S ELC
Sbjct: 622 SAVEIEETDIESAKT-KGAMALFGEKYGDTVRVLTMGG---------------GFSVELC 665

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGS 824
           GGTH++ T +   F + SE G+A G+RRI AVT   A      A    KE   AS ++GS
Sbjct: 666 GGTHVNRTGDIGLFKITSEGGVAAGVRRIEAVTGAQALVYLNQAEEQLKEA--ASLLKGS 723

Query: 825 LLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEV-GLDAAAVRE--- 880
              ++ +      + E N Q   ++    A+AA++ G     S VEV G+   A R+   
Sbjct: 724 ---RDNLLDKLGGILERNRQLEKELEQLKAKAASAAGNDLAASAVEVKGVRVLAARQDGL 780

Query: 881 ---AVLKVIEQ 888
              A+L +++Q
Sbjct: 781 DGKALLALVDQ 791


>gi|374852346|dbj|BAL55281.1| alanyl-tRNA synthetase [uncultured Bacteroidetes bacterium]
          Length = 863

 Score =  593 bits (1529), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 334/791 (42%), Positives = 460/791 (58%), Gaps = 65/791 (8%)

Query: 58  WPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLS 117
           W   +VR TF  FF +K H+   S+P+V  +DPTL F NAGMN +K +F+G  +P     
Sbjct: 2   WSTHEVRKTFLDFFAEKGHLIVPSAPLVNKHDPTLFFVNAGMNPFKDVFMGFKEPPA--- 58

Query: 118 KLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTK 177
              R  +TQKC+R  GKHNDL++VG DTYHHTFFEMLGNWSFGDYFK EAI WAWELLTK
Sbjct: 59  --PRVADTQKCLRVSGKHNDLEEVGHDTYHHTFFEMLGNWSFGDYFKEEAIAWAWELLTK 116

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCG 237
           VY+LP  RLY T FGGDE  GL  D E   +W +++P  R+  FG KDNFWEMGDTGPCG
Sbjct: 117 VYKLPPHRLYVTVFGGDEAWGLPADEETYALWQRWVPKERIRFFGKKDNFWEMGDTGPCG 176

Query: 238 PCSEIHYDRTGNR---DAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           PC+EIH D  G+     AA L+N  +P  IE+WN+VFIQ+NR SDGSL+PLP K VDTG+
Sbjct: 177 PCTEIHIDLRGDAAPGSAADLLNTGNPLVIELWNLVFIQYNRRSDGSLEPLPLKSVDTGM 236

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           G ERL  +LQ K S YD D+F+ +   +++ TG       +    A + D+A RV  DH+
Sbjct: 237 GLERLAMVLQGKTSTYDIDLFVALRKKLEELTG-------ILYGQAQRSDVALRVACDHV 289

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R ++FAIADG  P N G  Y+LRR+LRRA+RYG + L  Q  F + LV ++ ++    FP
Sbjct: 290 RGIAFAIADGQLPSNTGAGYILRRLLRRALRYGYQYLGIQQPFLHKLVPVLAELYEATFP 349

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLD 474
           EL Q+   +  II  EE SF  TL +G+ + +       GK + G  AF L+DTYGFPLD
Sbjct: 350 ELAQQAQTVARIIEGEEESFLHTLGRGLSRLESFLAQHSGKEIPGAVAFELYDTYGFPLD 409

Query: 475 LTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATD 534
           LTQL+A ERGL V+++GF  A+   + RSR A  +     + +     +A          
Sbjct: 410 LTQLIARERGLTVELKGFEEALARQKARSRQATQRTESDWVELAEGPHSA---------- 459

Query: 535 DSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGL 594
               F+ +  +++ ++ I    +  E+   G    +VL  + FY E GGQ+ D+G +   
Sbjct: 460 ----FVGYDVYEAPVR-ILRMRKVQEA--KGAFFHLVLDQTPFYPEGGGQMSDQGILYRG 512

Query: 595 FGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEV----ICKVDYDRRKLIAPNHTCTHM 650
                V  V      ++H+ +        S+ E++      K+D  RR+ ++ +HT TH+
Sbjct: 513 EEKISVLGVYREQDSIVHVVA--------SIPEDLEGTWTAKIDIPRREALSRHHTATHL 564

Query: 651 LNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSK 710
           L+ ALR+VLG HV Q GS+V P++LRFDF+H + + PE ++ +E+IVN++I+  L     
Sbjct: 565 LHAALRQVLGTHVRQSGSLVAPDRLRFDFTHPQRLTPEEIQALETIVNQKIEEALPRIEY 624

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
                E     G  A FGE Y + VR++  G                  S ELCGGTH+S
Sbjct: 625 RDIAYEEALQKGALAFFGEKYGERVRMIEFGG---------------DFSRELCGGTHVS 669

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKNQ 830
           NT E   F +LSE   A G+RR+ AV  G AY  +     +E+++ D   +   L    Q
Sbjct: 670 NTLELRFFKILSEMASAAGVRRVEAV-AGKAYIDW-----VERQLSDLQALRSLLKNSPQ 723

Query: 831 VRKAQKKVAEE 841
             +A +K  EE
Sbjct: 724 PVRALEKTLEE 734


>gi|383114261|ref|ZP_09935026.1| alanyl-tRNA synthetase [Bacteroides sp. D2]
 gi|313694030|gb|EFS30865.1| alanyl-tRNA synthetase [Bacteroides sp. D2]
          Length = 872

 Score =  593 bits (1529), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 327/747 (43%), Positives = 446/747 (59%), Gaps = 61/747 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++RD+F  FFE K H    S+P+V  +DPTL+F NAGMNQ+K I LG        +K 
Sbjct: 4   AKEIRDSFKNFFESKGHHIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGN-----HPAKY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWE L +V 
Sbjct: 59  QRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAINWAWEYLVEVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +L  + LYAT F G  + GL+ D+EA   W +FLP   ++     DNFWEMGDTGPCGPC
Sbjct: 119 KLNPEYLYATVFEGSPEEGLSRDDEAASYWEQFLPKDHIINGNKHDNFWEMGDTGPCGPC 178

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + A      LVN+D P  IEIWN+VF+Q+NR++DGSL+PLPAK +DTG+
Sbjct: 179 SEIHIDLRPAEERAKISGRDLVNHDHPQVIEIWNLVFMQYNRKADGSLEPLPAKVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF P+  AI   +G      + G D   + D+A RV+ADHI
Sbjct: 239 GFERLCMALQGKTSNYDTDVFQPMLKAIAAMSGT-----EYGKD--KQQDIAMRVIADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++F+I DG  P N    YV+RRILRRAVRYG   L  +  F   L+ +++  MG+ +P
Sbjct: 292 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLIDNMGEAYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ--GKV-LSGQDAFILWDTYGF 471
           EL  ++  I ++I  EE SF +TL  GI    K  +D +  GK  +SG+DAF L+DT+GF
Sbjct: 352 ELVAQKTLIEKVIKEEEESFLRTLETGIRLLDKTMEDTKASGKTEISGKDAFTLYDTFGF 411

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E  + V+I+ FN  M + ++R+R+A   + G  I++    T  +   G  
Sbjct: 412 PLDLTELILRENEMTVNIDEFNEEMQQQKQRARNAAAIETGDWIILKEGTTEFV---GYD 468

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            T+     + ++  K   + +Y                IVL  + FYAE GGQ+ D G +
Sbjct: 469 YTEYEASILRYRQIKQKNQTLYQ---------------IVLDYTPFYAESGGQVGDTGVL 513

Query: 592 EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHML 651
              F +  V + +      IHI   T+          + C VD D+R   A NH+ TH+L
Sbjct: 514 VSEFETIEVIDTKKENNLPIHI---TKKLPEHPEAPMMAC-VDTDKRAACAANHSATHLL 569

Query: 652 NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS-K 710
           + ALREVLG+H++QKGS+V P+ LRFDFSH + V  E +R++E IVN +++A + +   +
Sbjct: 570 DAALREVLGEHIEQKGSLVTPDSLRFDFSHFQKVTDEEIRKVEHIVNARVRANIPLKEYR 629

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
              + EAK +  + A+FGE Y D VRV+  G                  S E CGGTH++
Sbjct: 630 NIPIEEAKELGAI-ALFGEKYGDKVRVIQFGS-----------------SIEFCGGTHVA 671

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVT 797
            T       ++SE  +A G+RRI A T
Sbjct: 672 ATGNIGMVKIMSESSVAAGVRRIEAYT 698


>gi|183596274|ref|ZP_02958302.1| hypothetical protein PROSTU_00005 [Providencia stuartii ATCC 25827]
 gi|188023874|gb|EDU61914.1| alanine--tRNA ligase [Providencia stuartii ATCC 25827]
          Length = 876

 Score =  593 bits (1528), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 351/935 (37%), Positives = 525/935 (56%), Gaps = 90/935 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSK--L 119
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG       L K   
Sbjct: 7   EIRQAFLDFFHTKGHQVVSSSSLVPNNDPTLLFTNAGMNQFKDVFLG-------LDKRAY 59

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           +RA   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI +AWELLT  +
Sbjct: 60  SRATTAQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAINFAWELLTGKE 119

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFW 228
            + LP ++L+ T +          D+EA DIW K   +P  R++  G         DNFW
Sbjct: 120 WFNLPKEKLWVTVY--------ETDDEAYDIWHKEVGIPVDRIIRIGDNKGAPYASDNFW 171

Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
           +MGDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR+SDG+++PLP
Sbjct: 172 QMGDTGPCGPCTEIFYDHGEHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQSDGTMEPLP 231

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
              VDTG+G ER+ ++LQ+  SNYD D+F  +  A  +ATG+   S K           +
Sbjct: 232 KPSVDTGMGLERIAAVLQHVNSNYDIDIFQELIAAAAKATGSNDLSNK-----------S 280

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            RV+ADHIR+ +F ++DG  P NEGR YVLRRI+RRAVR+G  +L A+D FF  LV  ++
Sbjct: 281 LRVIADHIRSCAFLVSDGVIPSNEGRGYVLRRIIRRAVRHGY-MLGAKDTFFYKLVAPLI 339

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
            VMG    EL ++++ + +++  EE  F +TL +G++   +    ++G  L G+  F L+
Sbjct: 340 NVMGAAADELARQQSTVEKVLKTEEEQFARTLERGLQLLDEELAALKGDTLDGETVFRLY 399

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFP+DLT  +  ER + VD EGF  AM++ R R+R +           D ++   + 
Sbjct: 400 DTYGFPMDLTADVCRERNIKVDEEGFERAMEDQRRRARESS------GFGTDYNSLIKVE 453

Query: 527 KRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           K         F    + +  + I AIY   + ++S+  G E  ++L  ++FYAE GGQ+ 
Sbjct: 454 KHS------EFSGYAYNEQLATITAIYKNGQPVDSLNAGEEGLVILDKTAFYAESGGQVG 507

Query: 587 DEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
           D G +    GSF V + Q YG  + HIG +  G+    +   +  K+D +RR  I  NH+
Sbjct: 508 DTGLLRNDSGSFIVTDTQKYGQAIGHIGKVESGS--LVINHRIDAKIDVERRDAIRLNHS 565

Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD 706
            TH+L+ ALR+VLG+HV QKGS+V  + LRFDFSH + +    LR +E IVN QI+    
Sbjct: 566 ATHLLHAALRQVLGEHVSQKGSLVNDKYLRFDFSHFEAMTAAQLREVEDIVNAQIRKNTP 625

Query: 707 VFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGG 766
           + ++   L  AK   G  A+FGE Y + VRV+++G                  S ELCGG
Sbjct: 626 IETELMDLESAKA-KGAMALFGEKYEERVRVLSMGG---------------DFSIELCGG 669

Query: 767 THLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKI----E 822
           TH S T +   F +LSE G A G+RRI A T      A E+  S  ++++  + +     
Sbjct: 670 THASRTGDIGLFRILSESGTAAGVRRIEATT---GESALESVHSQSEQLNAIAHLLKGDM 726

Query: 823 GSLLEK-----NQVRKAQKKVAE-ENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            SL+EK      + R+ +K++ + ++ Q + + A+ +++A    G    +S++    +  
Sbjct: 727 SSLVEKVKSALEKSRQLEKEILQLKDQQASQESASLSSKAKDIKGVKLLVSQLN-NTEPK 785

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q    ++V ST  + +K  +  GV   +D + +++  + ++   Q + G
Sbjct: 786 LLRTMVDDLKNQLKSAIIVLST-TSGDKVSIIVGVT--NDLTAKIKAGDLISYVAQQVGG 842

Query: 937 RCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           + G G+  +A   GTD + +  AM    ++ + +L
Sbjct: 843 KGG-GRPDMAQAGGTDVSALPTAMASVEDWVSSRL 876


>gi|290476264|ref|YP_003469168.1| alanyl-tRNA synthetase [Xenorhabdus bovienii SS-2004]
 gi|289175601|emb|CBJ82404.1| alanyl-tRNA synthetase [Xenorhabdus bovienii SS-2004]
          Length = 887

 Score =  593 bits (1528), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 353/938 (37%), Positives = 523/938 (55%), Gaps = 83/938 (8%)

Query: 55  VVEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNT 114
           ++     ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG      
Sbjct: 12  IMSKSTAEIRQAFLDFFHTKGHQIVPSSSLVPNNDPTLLFTNAGMNQFKDVFLG------ 65

Query: 115 QLSK--LTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAW 172
            L K   +RA   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI++AW
Sbjct: 66  -LDKRPYSRATTAQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIKYAW 124

Query: 173 ELLT--KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG------ 222
           ELLT  + + LP ++L+ T +          D+EA DIW K   +PA R++  G      
Sbjct: 125 ELLTGKEWFNLPKEKLWVTVY--------ETDDEAYDIWHKEVGIPAERIIRIGDNKGAP 176

Query: 223 -CKDNFWEMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESD 279
              DNFW+MGDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR  D
Sbjct: 177 YASDNFWQMGDTGPCGPCTEIFYDHGEHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRHVD 236

Query: 280 GSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADD 339
           G+++PLP   VDTG+G ERLT++LQ+  SNYD D+F  +  ++ + TGA           
Sbjct: 237 GTMEPLPKPSVDTGMGLERLTAVLQHVNSNYDIDLFCDLIASVAEVTGA----------- 285

Query: 340 ADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFN 399
            D  + + RV+ADHIR+ +F + DG  P NE R YVLRRI+RRAVR+G+ +L A++ FF 
Sbjct: 286 TDLTNKSLRVIADHIRSCAFLVCDGVVPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFY 344

Query: 400 GLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSG 459
            LV  ++K+MG    ELK++++ + +++  EE  F +TL +G++   +  + + G  L G
Sbjct: 345 KLVAPLIKIMGSAGDELKRQQSLVEQVLKTEEEQFARTLERGLQLLDEELEKLSGDTLDG 404

Query: 460 QDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDA 519
           + AF L+DTYGFP+DLT  +  ER + VD  GF+ AM+  R R+R +           D 
Sbjct: 405 ETAFRLYDTYGFPVDLTADVCRERNIKVDEVGFDVAMENQRRRARESS------GFGTDY 458

Query: 520 DATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYA 579
           +    +  R        F        ++ + AI+   E I+ +  G E  ++L  ++FYA
Sbjct: 459 NEQIKVDGRS------DFSGYEHNSQQATVMAIFRHGEAIDQIHAGEEAIVILDKTAFYA 512

Query: 580 EQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRK 639
           E GGQ+ D G +    G F V + Q YG  + HIG L  G    +V   +  +++  RR 
Sbjct: 513 ESGGQVGDTGNLSNGNGIFEVTDTQKYGQAIGHIGKLINGT--LNVNNTINAEINRVRRD 570

Query: 640 LIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNE 699
            I  NH+ TH+L+ ALR++LG+HV QKGS+V  + LRFDFSH + +  E +R++E++VNE
Sbjct: 571 SIRLNHSATHLLHAALRQILGEHVSQKGSLVNDKYLRFDFSHFEAMKLEQIRQVENLVNE 630

Query: 700 QIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSI 759
           +I+  L + ++   L EAK   G  A+FGE Y + VRV+++G                  
Sbjct: 631 EIRKNLSIVTELMELEEAKT-KGAMALFGEKYDEQVRVLSMG----------------DF 673

Query: 760 SAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDAS 819
           S ELCGGTH S T +   F + SE G A GIRRI A+T   A  +      L +++    
Sbjct: 674 STELCGGTHASRTGDIGLFRISSESGTAAGIRRIEAITGQTALNSVYQQTDLLQDIAHLV 733

Query: 820 KIE-GSLLEKNQVRKAQKKVAEENLQ--KAVKVATETAEAAASNGKPFCISRVEVGL--- 873
           K +  SL EK +    + K  E+ LQ  K+ + A E++  A    +   +  +   L   
Sbjct: 734 KSDISSLNEKVKTTLDRTKQLEKELQHLKSQQAAQESSSLANQTKEIQGVRLLVTQLGDT 793

Query: 874 DAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQP 933
           +   +R  V ++  Q G  ++V ST  T +K  +  G+ +  D + +++  + ++   Q 
Sbjct: 794 EPKMLRTMVDELKNQLGSAIIVLST-VTGDKVTLIVGITK--DLTARIKAGDLISFVAQQ 850

Query: 934 LKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           + G+ G G+  LA   GTD A +  A+    E+  ++L
Sbjct: 851 VGGKGG-GRPDLAQAGGTDVAALPSALASVEEWVTLRL 887


>gi|218710534|ref|YP_002418155.1| alanyl-tRNA synthetase [Vibrio splendidus LGP32]
 gi|218323553|emb|CAV19764.1| Alanyl-tRNA synthetase [Vibrio splendidus LGP32]
          Length = 860

 Score =  593 bits (1528), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 365/917 (39%), Positives = 515/917 (56%), Gaps = 92/917 (10%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR+ F KFFE K H    SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRNAFLKFFESKEHQIVDSSSLVPHNDPTLLFTNAGMNQFKDCFLGA-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK EAI +AWE LT+   L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEEAIGFAWEFLTETLGL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           P DRL  T +          D+EA +IW K   +PA +++  G K        DNFW MG
Sbjct: 122 PKDRLLVTVY--------ETDDEAFEIWNKKVGIPADKIVRIGDKEGGKKFESDNFWTMG 173

Query: 232 DTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
           DTGPCGPC+EI YD      G R        D    IEIWN VF+QFNR +DG+++PLP 
Sbjct: 174 DTGPCGPCTEIFYDHGEHIWGGRPGTP--EEDGDRFIEIWNNVFMQFNRHADGTMEPLPK 231

Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
             VDTG+G ER+++I+Q   SNY+ DVF  +  A  +          VG DD    + + 
Sbjct: 232 PAVDTGMGIERISAIMQGVHSNYEIDVFQKLIKATAEV---------VGHDDLS--NQSL 280

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RV+ADHIR+ SF IADG  P NEGR YVLRRI+RRAVR+G+++  AQ  FF+ LV ++ +
Sbjct: 281 RVIADHIRSCSFLIADGVMPSNEGRGYVLRRIIRRAVRHGNKI-GAQGVFFHKLVGVLAE 339

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWD 467
           VMG    ELK+++  + +++  EE +FG+TL +G+     A   ++GK L G+  F L+D
Sbjct: 340 VMGSAAEELKKQQELVEKVLRIEEENFGRTLERGMVILNDALDALEGKELDGETVFKLYD 399

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
           TYGFP DLT  +A ER   +D  GF  AM+  R+R+R A      G    D +AT     
Sbjct: 400 TYGFPADLTNDVARERDFTIDEAGFEKAMEAQRKRAREA------GQFGTDYNAT----- 448

Query: 528 RGVLATDDSFKFIWFQDHKSV--IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
              +  D + +F  +   +    I A++   E + S+  G++  I+L  + FYAE GGQ 
Sbjct: 449 ---IKVDTNTEFCGYTGTEGAGEISALFVDGEEVSSLSAGDKAIIILEETPFYAESGGQC 505

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D G +    G F V++ Q  G    H G L EG   F+ G++V  +VD +RR  I+ NH
Sbjct: 506 GDAGTLSTASGLFKVQDTQKLGNAFSHHGELVEGV--FAQGDKVEARVDAERRAAISLNH 563

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+L+ ALREVLG+HV QKGS+V P+ LRFDFS+ + V P  ++ +E +VN Q++   
Sbjct: 564 SATHLLHSALREVLGEHVAQKGSLVKPDNLRFDFSNLEAVTPAQIKEVERLVNAQVRKNH 623

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    +  AK   G  A+FGE Y D VRV+++G                  S ELCG
Sbjct: 624 VIETNIMDIESAKE-KGAMALFGEKYDDEVRVLSMG----------------DFSTELCG 666

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEA-ACSLEKEVDDASKIEGS 824
           G H SNT +   F + SE GIA G+RRI AVT   A  A EA A + E+++ +++K   S
Sbjct: 667 GIHASNTGDIGLFKITSEGGIAAGVRRIEAVTGEAALDAVEAQANAYEEKLAESAKKAKS 726

Query: 825 LLEKNQVRKAQKKVAE-ENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVL 883
           L ++ Q+ K +   AE  N+   V+  +         G    ++ +E G D   +R  V 
Sbjct: 727 LEKEIQLLKEKMAAAEGANIMGKVEEIS---------GTKVLVAAIE-GADNKNLRTMVD 776

Query: 884 KVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKG 943
               Q G  +++ + +    K  + AGV +  D   +++  + +    + + G+ G G+ 
Sbjct: 777 NAKNQVGSGIILIA-NVADGKVGLIAGVTK--DLIGKVKAGDLVKMVAEQVGGKGG-GRP 832

Query: 944 GLASGQGTDAAQVTPAM 960
            +A   GTD   +  A+
Sbjct: 833 DMAQAGGTDVEALPEAL 849


>gi|254226851|ref|ZP_04920422.1| alanyl-tRNA synthetase [Vibrio cholerae V51]
 gi|125620648|gb|EAZ49011.1| alanyl-tRNA synthetase [Vibrio cholerae V51]
          Length = 860

 Score =  593 bits (1528), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 361/922 (39%), Positives = 515/922 (55%), Gaps = 80/922 (8%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR  F  FFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI++AWE LT V +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           P +RL  T +          D+EA DIW K   +PA R++  G K        DNFW+MG
Sbjct: 122 PKERLLVTVY--------ETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKH 289
           DTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG+++PLP   
Sbjct: 174 DTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPS 233

Query: 290 VDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRV 349
           VDTG+G ER+++I+Q   SNY+ DVF  +  A   A G +           D  + + RV
Sbjct: 234 VDTGMGIERISAIMQGVHSNYEIDVFQTLIKAAADAIGYQ-----------DLTNQSLRV 282

Query: 350 VADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVM 409
           VADHIR+ +F I DG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF+ LV  + +VM
Sbjct: 283 VADHIRSCAFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGAFFHKLVGPLAEVM 341

Query: 410 GDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTY 469
           G    ELK+++A + +++  EE +FG+TL +G+     A   + G+VL G+  F L+DTY
Sbjct: 342 GTAGVELKKQQALVEKVLRIEEENFGRTLDRGMSILNDALDQLSGQVLDGETVFKLYDTY 401

Query: 470 GFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRG 529
           GFP DLT  +A ERG  +D  GF  AM+E R+R+R A      G    D +   +L K  
Sbjct: 402 GFPADLTNDVARERGFSIDEAGFEQAMEEQRQRAREA------GQFGTDYN---SLIKS- 451

Query: 530 VLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEG 589
             AT+  F        +SV++ ++     I ++  G++  IVL ++ FYAE GGQ  D G
Sbjct: 452 --ATNTEFCGYTASRGQSVVREMFVEGAEISTLSAGDKAIIVLDNTPFYAESGGQCGDTG 509

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
            ++   G FYV + Q  G  + H G L +G    + G++V   VD  RR  I+ NH+ TH
Sbjct: 510 VLKTDAGIFYVEDTQKLGNAIAHHGVLAQGV--LATGDQVDAIVDEKRRAAISLNHSATH 567

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +L+ ALR+VLG+HV QKGS+V  E LRFDFSH + +    ++ +E +VN++++    + +
Sbjct: 568 LLHAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTAAEIKEVERLVNQEVRRNHSIET 627

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
               + EAK   G  A+FGE Y D VRV+++G                  S ELCGG H 
Sbjct: 628 NIMNIDEAKA-KGAMALFGEKYDDQVRVLSMG----------------DFSTELCGGIHA 670

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKN 829
           SNT +   F ++SE GIA GIRRI AVT   A    +A  +           +  LLEK 
Sbjct: 671 SNTGDIGLFKIISEGGIAAGIRRIEAVTGEGALDYLDAQQAQHDAKVSEMAAKAKLLEK- 729

Query: 830 QVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQK 889
           ++++ + K+A +     +    + A      G    ++++  G D  A+R  V  +  Q 
Sbjct: 730 EIQQLKDKLAAKESAGLINQVKQIA------GVNVLVAQLN-GADNKALRGMVDDLKNQL 782

Query: 890 GMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQ 949
              +++   +    K  + AGV   +D + +++  E +      + G+ G G+  +A   
Sbjct: 783 SSGIIMLG-NVAEGKVGLIAGVT--NDLTNKVKAGELVNMVALQVGGK-GGGRPDMAQAG 838

Query: 950 GTDAAQVTPAMDLAAEFAAMKL 971
           GTDA  +  A++    + A +L
Sbjct: 839 GTDAHALPSALESVDAWIAERL 860


>gi|422605533|ref|ZP_16677546.1| alanyl-tRNA synthetase [Pseudomonas syringae pv. mori str. 301020]
 gi|330889188|gb|EGH21849.1| alanyl-tRNA synthetase [Pseudomonas syringae pv. mori str. 301020]
          Length = 874

 Score =  593 bits (1528), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 367/935 (39%), Positives = 524/935 (56%), Gaps = 96/935 (10%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F  FFE++ H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLGFFEEQGHTRVASSSLIPGNDPTLLFTNAGMNQFKDCFLGQ-----EKRAY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           TRA  +QKC+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AW  LT  K
Sbjct: 58  TRAVTSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAITYAWTFLTSEK 117

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFW 228
              LP ++L+ T +        A D+EA DIW K +  PA R++  G         DNFW
Sbjct: 118 WLNLPKEKLWVTVY--------ATDDEAYDIWTKEIGVPAERMVRIGDNKGAPYASDNFW 169

Query: 229 EMGDTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKP 284
            MGDTGPCGPCSEI +D      G    +     D    IEIWN VF+QFNR +DG L P
Sbjct: 170 TMGDTGPCGPCSEIFFDHGPEIWGGPPGSP--EEDGDRYIEIWNNVFMQFNRTADGVLHP 227

Query: 285 LPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVD 344
           LPA  VDTG+G ER++++LQ+  SNY+ D+F  +  A  +A G            ++   
Sbjct: 228 LPAPSVDTGMGLERVSAVLQHVHSNYEIDLFQSLLAASAKAIGC-----------SNDNQ 276

Query: 345 MAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNI 404
            + +VVADHIR+  F IADG  P NEGR YVLRRI+RRA R+G++ L A+  FF  +V  
Sbjct: 277 ASLKVVADHIRSCGFLIADGVLPSNEGRGYVLRRIIRRACRHGNK-LGAKGSFFYQIVAA 335

Query: 405 VVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFI 464
           +V  MG  FPEL Q+++HI  ++  EE  F KTL +G++  ++   D++G V+ G+  F 
Sbjct: 336 LVAEMGSAFPELVQQQSHIERVLKGEEEQFAKTLEQGLKILEQDLADLKGTVVPGEVVFK 395

Query: 465 LWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAA 524
           L+DTYGFP+DLT  +A ER L +D  GF   MD  R R+RSA       +  MD ++   
Sbjct: 396 LYDTYGFPMDLTGDIARERNLTLDEAGFEREMDAQRVRARSAS------SFGMDYNS--- 446

Query: 525 LHKRGVLATDDSFKFIWFQ--DHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQG 582
                ++  D + +F  +      + + A+Y   + +  +  G E  ++L ++ FYAE G
Sbjct: 447 -----LVKVDVATQFTGYSATTGSASVVALYKEGQSVTHLNEGEEGVVILDTTPFYAESG 501

Query: 583 GQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIA 642
           GQI D GF+      F V +    GG  +H G +  G+   SVG +V  +V  + R    
Sbjct: 502 GQIGDSGFLHAGDVRFDVSDTTKTGGAFLHHGVVASGS--LSVGAQVETQVADEVRDATK 559

Query: 643 PNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIK 702
            NH+ TH+L+ ALR+VLG+HV QKGS+V  ++LRFDFSH + + PE LR +E IVN +I+
Sbjct: 560 LNHSATHLLHAALRQVLGEHVQQKGSLVDSQRLRFDFSHFEAIKPEQLRALEDIVNAEIR 619

Query: 703 AELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAE 762
              +V ++E  +  AK   G  A+FGE Y D VRV+++G +                S E
Sbjct: 620 KNTEVMTEETDIDTAKK-KGAMALFGEKYGDSVRVLSMGGE---------------FSVE 663

Query: 763 LCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAF--------EAACSLEKE 814
           LCGG H S T +   F ++SE G+A G+RRI AVT   A            EAA  ++  
Sbjct: 664 LCGGIHASRTGDIALFKIVSEGGVAAGVRRIEAVTGAAALAWLNAAEDQLKEAATLVKGN 723

Query: 815 VDDASKIEGSLLEKNQVRKAQKKVAEENLQ-KAVKVATETAEAAASN--GKPFCISRVEV 871
            D+      ++LE+N++ + Q     E LQ KA   A +   AAA +  G     +R++ 
Sbjct: 724 RDNLLDKLTAVLERNRLLEKQL----EQLQAKAASAAGDDLSAAALDVKGVKVLATRLD- 778

Query: 872 GLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAAL 931
           G D  A+   V ++  + G  V++  +    +K V+ AGV +  D + QL+  + +  A 
Sbjct: 779 GQDGKALLALVDQLKNKLGRAVILLGSVH-EDKVVLVAGVTK--DLTGQLKAGDLMKQAA 835

Query: 932 QPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEF 966
             + G+ G G+  +A G G DA  +  A+ LA  F
Sbjct: 836 AAVSGK-GGGRPDMAQGGGVDAGALDSALALAVPF 869


>gi|255690436|ref|ZP_05414111.1| alanine--tRNA ligase [Bacteroides finegoldii DSM 17565]
 gi|260623884|gb|EEX46755.1| alanine--tRNA ligase [Bacteroides finegoldii DSM 17565]
          Length = 872

 Score =  593 bits (1528), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 328/747 (43%), Positives = 445/747 (59%), Gaps = 61/747 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++RD+F  FFE K H    S+P+V  +DPTL+F NAGMNQ+K I LG        +K 
Sbjct: 4   AKEIRDSFKNFFESKGHHIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGN-----HPAKY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWE L  V 
Sbjct: 59  KRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAWEYLVDVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +L  + LYAT F G  + GL+ D+EA   W +FLP   ++     DNFWEMGDTGPCGPC
Sbjct: 119 KLNPEHLYATVFEGSPEEGLSRDDEAASYWEQFLPKDHIINGNKHDNFWEMGDTGPCGPC 178

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + A      LVN+D P  IEIWN+VF+Q+NR++D SL+PLPAK +DTG+
Sbjct: 179 SEIHIDLRPAEERAKISGRDLVNHDHPQVIEIWNLVFMQYNRKADSSLEPLPAKVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF P+  AI   +       + G D   + D+A RV+ADHI
Sbjct: 239 GFERLCMALQGKTSNYDTDVFQPMLKAIAAMSDT-----EYGKD--KQQDIAMRVIADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++F+I DG  P N    YV+RRILRRAVRYG   L  +  F   L+ ++++ MG+ +P
Sbjct: 292 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLIENMGEAYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ--GKV-LSGQDAFILWDTYGF 471
           EL  ++  I ++I  EE SF +TL  GI    K  +D +  GK  +SG+DAF L+DT+GF
Sbjct: 352 ELIAQKTLIEKVIKEEEESFLRTLETGIRLLDKTMEDTKAAGKTEISGKDAFTLYDTFGF 411

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E G++V+IE FN  M + ++R+R+A   + G  I +    T  +   G  
Sbjct: 412 PLDLTELILRENGMIVNIEEFNEEMQQQKQRARNAAAIETGDWITLKEGTTEFV---GYD 468

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            T+     + ++  +   + +Y                IVL  + FYAE GGQ+ D G +
Sbjct: 469 YTEYEASILRYRQIRQKNQTLYQ---------------IVLDYTPFYAESGGQVGDTGVL 513

Query: 592 EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHML 651
              F +  V + +      IHI   T+          + C VD D+R   A NH+ TH+L
Sbjct: 514 VSEFETIEVIDTKKENNLPIHI---TKKLPEHPEAPMMAC-VDTDKRAACAANHSATHLL 569

Query: 652 NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS-K 710
           + ALREVLG+HV+QKGS+V P+ LRFDFSH + V  E +R++E IVN +I+A + +   +
Sbjct: 570 DSALREVLGEHVEQKGSLVTPDSLRFDFSHFQKVTDEEIRKVEHIVNAKIRANIPLKEYR 629

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
              + EAK +  + A+FGE Y D VRV+  G                  S E CGGTH++
Sbjct: 630 NIPIEEAKELGAI-ALFGEKYGDRVRVIQFGS-----------------SIEFCGGTHVA 671

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVT 797
            T       ++SE  +A G+RRI A T
Sbjct: 672 ATGNIGMVKIISESSVAAGVRRIEAYT 698


>gi|332292251|ref|YP_004430860.1| alanyl-tRNA synthetase [Krokinobacter sp. 4H-3-7-5]
 gi|332170337|gb|AEE19592.1| alanyl-tRNA synthetase [Krokinobacter sp. 4H-3-7-5]
          Length = 870

 Score =  592 bits (1527), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 362/876 (41%), Positives = 495/876 (56%), Gaps = 68/876 (7%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + +VR  F  FFE K H    S+P+V  +DPTL+F NAGM  +K  FLG A P     K 
Sbjct: 3   SQEVRKQFLDFFESKKHTIVPSAPMVLKDDPTLMFTNAGMVPFKEYFLGNATP-----KN 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  +TQKC+R  GKHNDL++VGKDTYHHT FEMLGNWSFGDYFK EAI WAWE LT+V 
Sbjct: 58  ARLSDTQKCLRVSGKHNDLEEVGKDTYHHTMFEMLGNWSFGDYFKEEAIAWAWEFLTEVV 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           ++  D LY + F GD++ GL  D EA DIW + +   R++    KDNFWEMG  GPCGPC
Sbjct: 118 KIDKDSLYVSVFEGDKEDGLDRDQEAFDIWKQRIDEDRIIDGNKKDNFWEMGAQGPCGPC 177

Query: 240 SEIHYD-----RTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D          D  +L+N D P  +EIWN+VF+Q+NR +DGSL  LP +HVDTG+
Sbjct: 178 SEIHVDIRSAEEKAKVDGKTLINMDHPHVVEIWNLVFMQYNRLADGSLVKLPNQHVDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL  +LQ   SNYDTDVF P+   I+  T +     K G D  +++D+A RV+ADH+
Sbjct: 238 GFERLCMVLQGVQSNYDTDVFTPLMSEIETITNS-----KCGND--EEIDIAVRVIADHV 290

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R +SF+IADG  P N G  YV+RRILRRA+RYG   L  ++ F   LV  +VK MGD FP
Sbjct: 291 RAVSFSIADGQLPSNTGAGYVIRRILRRAIRYGFTFLDMKEPFIYKLVATLVKQMGDAFP 350

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLD 474
           ELK ++  +  +I  EEASF +TL KG+        D +G  +SG  AF L+DTYGFP+D
Sbjct: 351 ELKSQKNLMTNVIREEEASFLRTLDKGLLLLDNVIADTKGDTVSGDKAFELYDTYGFPID 410

Query: 475 LTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATD 534
           LT L+  E+ L +D +GF  A+ E ++RSR+A          ++ D    LH+      D
Sbjct: 411 LTALILSEKNLKLDEKGFEAALKEQKDRSRAATK--------VETDDWNILHE------D 456

Query: 535 DSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGL 594
              +F+ +   ++ +K   T     ES   G    +V   + FY E GGQ+ D+G++E  
Sbjct: 457 AEEEFVGYDTLETPVK--ITRYRKTESKKDGELYQLVFNLTPFYPEGGGQVGDKGYLETP 514

Query: 595 FGS-FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNF 653
            G   Y+ + +     +IH   L +   R + G      VD  +R   A NHT TH+L+ 
Sbjct: 515 NGEVVYIIDTKKENNLIIH---LAKNLPRSTDG-TFKAVVDAKQRSRTAVNHTATHLLHQ 570

Query: 654 ALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEAT 713
            LR+VLG HV+QKGS+V    LRFDF+H   V  E L+ +E  VN +I+  L +  +   
Sbjct: 571 GLRKVLGTHVEQKGSMVHSGNLRFDFAHFSRVTKEELKEVEDFVNARIRENLSLEEQRGI 630

Query: 714 LAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTR 773
             +     G  A+FGE Y D VR +  G+                 S ELCGGTH+ NT 
Sbjct: 631 PYDQAVQEGAIALFGEKYGDAVRTIRFGK-----------------SMELCGGTHVKNTG 673

Query: 774 EAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV-------DDASKIEGSLL 826
           +   F + SE  +A GIRRI A+T+  A   F +      +V        D  K   SLL
Sbjct: 674 DIWHFKITSEGAVASGIRRIEAITSDAAKDYFTSETEAYNQVKATLKGNQDPVKAITSLL 733

Query: 827 EKNQVRKAQKKVAEENLQKAVKVATETA-EAAASNGKPFCISRVEVGLDAAAVREAVLKV 885
           ++N   K  K+V     +KA  ++ + A E    +G  F   +V+  LDA A+++   K+
Sbjct: 734 DENAALK--KQVEALIKEKAQNLSGDLAKEFTDIDGVDFLAKKVD--LDAGAIKDLAFKL 789

Query: 886 IEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQL 921
            E K    ++F+T E   KA++   + ++   SKQL
Sbjct: 790 GENKDNVFILFAT-EQEGKALLSCYISKELVASKQL 824


>gi|297580680|ref|ZP_06942606.1| alanyl-tRNA synthetase [Vibrio cholerae RC385]
 gi|297535096|gb|EFH73931.1| alanyl-tRNA synthetase [Vibrio cholerae RC385]
          Length = 860

 Score =  592 bits (1527), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 358/922 (38%), Positives = 514/922 (55%), Gaps = 80/922 (8%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR  F  FFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI++AWE LT V +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           P +RL  T +          D+EA DIW K   +PA R++  G K        DNFW+MG
Sbjct: 122 PKERLLVTVY--------ETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKH 289
           DTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG+++PLP   
Sbjct: 174 DTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPS 233

Query: 290 VDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRV 349
           VDTG+G ER+++I+Q   SNY+ DVF  +  A   A G +           D  + + RV
Sbjct: 234 VDTGMGIERISAIMQGVHSNYEIDVFQTLIKAAADAIGYQ-----------DLTNQSLRV 282

Query: 350 VADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVM 409
           VADHIR+ +F I DG  P NEGR YVLRRI+RRAVR+G++ L AQ   F+ LV  + +VM
Sbjct: 283 VADHIRSCAFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGASFHKLVGPLAEVM 341

Query: 410 GDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTY 469
           G    ELK+++A + +++  EE +FG+TL +G+     A   + G+VL G+  F L+DTY
Sbjct: 342 GTAGAELKKQQALVEKVLRIEEENFGRTLDRGMSILNDALDQLSGQVLDGETVFKLYDTY 401

Query: 470 GFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRG 529
           GFP DLT  +A ERG  +D  GF  AM+E R+R+R A      G    D ++        
Sbjct: 402 GFPADLTNDVARERGFSIDEAGFEQAMEEQRQRAREA------GQFGTDYNSLIK----- 450

Query: 530 VLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEG 589
             AT+  F        +SV++ ++     + ++  G++  IVL ++ FYAE GGQ  D G
Sbjct: 451 -SATNTEFCGYTASRGQSVVREMFVEGAEVSTLSAGDKAIIVLDNTPFYAESGGQCGDTG 509

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
            ++   G F+V + Q  G  + H G L +G    + G++V   VD  RR  I+ NH+ TH
Sbjct: 510 VLKTDAGIFHVEDTQKLGNAIAHHGVLAQGV--LATGDQVDAIVDEKRRAAISLNHSATH 567

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +L+ ALR+VLG+HV QKGS+V  E LRFDFSH + + P  ++ +E +VN++I+   ++ +
Sbjct: 568 LLHAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTPAEIKEVERLVNQEIRHNHNIET 627

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
               + EAK   G  A+FGE Y D VRV+++G                  S ELCGG H 
Sbjct: 628 NIMNIDEAKA-KGAMALFGEKYDDQVRVLSMG----------------DFSTELCGGIHA 670

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKN 829
           SNT +   F ++SE GIA GIRRI AVT   A    +A  +           +  LLEK 
Sbjct: 671 SNTGDIGLFKIISEGGIAAGIRRIEAVTGEGALDYLDAQQAQHDAKVSEMAAKAKLLEK- 729

Query: 830 QVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQK 889
           ++++ + K+A +     +    + A      G    ++++  G D  A+R  V  +  Q 
Sbjct: 730 EIQQLKDKLAAKESAGLINQVKQIA------GVNVLVAQLN-GADNKALRGMVDDLKNQL 782

Query: 890 GMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQ 949
              +++   +    K  + AGV   +D + +++  E +      + G+ G G+  +A   
Sbjct: 783 SSGIIMLG-NVAEGKVGLIAGVT--NDLTNKVKAGELVNMVALQVGGK-GGGRPDMAQAG 838

Query: 950 GTDAAQVTPAMDLAAEFAAMKL 971
           GTDA  +  A++    + A +L
Sbjct: 839 GTDAHALPSALESVDAWIAERL 860


>gi|340346643|ref|ZP_08669764.1| alanine--tRNA ligase [Prevotella dentalis DSM 3688]
 gi|433651896|ref|YP_007278275.1| alanine--tRNA ligase [Prevotella dentalis DSM 3688]
 gi|339611244|gb|EGQ16076.1| alanine--tRNA ligase [Prevotella dentalis DSM 3688]
 gi|433302429|gb|AGB28245.1| alanine--tRNA ligase [Prevotella dentalis DSM 3688]
          Length = 886

 Score =  592 bits (1527), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 364/937 (38%), Positives = 515/937 (54%), Gaps = 81/937 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++RD++ KFFE K HV   S+P+V  +DPTL+F NAGMNQ+K + LGT DP  +    
Sbjct: 4   ANEIRDSYKKFFESKGHVIVPSAPMVIKDDPTLMFTNAGMNQWKDVILGTKDPAPR---- 59

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK  AI++AWE L  V 
Sbjct: 60  -RRTDSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKEGAIDYAWEYLVDVL 118

Query: 180 RL-PADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGP 238
            L PAD LY T F G  + G+A D EA   W K +PA  ++     DNFWEMGDTGPCGP
Sbjct: 119 HLNPAD-LYVTVFEGAPEEGIARDEEAARYWAKHVPADHIINGNKHDNFWEMGDTGPCGP 177

Query: 239 CSEIHYDRTGNRDAA-----SLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTG 293
           C+EIH D   + + A      LVN D+P  IEIWN+VF+QFNR++DG+L+PLP   +DTG
Sbjct: 178 CTEIHVDSRPDEEKALVPGRELVNKDNPQVIEIWNVVFMQFNRKADGTLEPLPMHVIDTG 237

Query: 294 LGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGAR--------PYSGKVGADDADKVDM 345
           +GFERL  +LQ K SNYDTD+F PI   I+  +G          P  G+  A   +K D+
Sbjct: 238 MGFERLVRMLQGKHSNYDTDIFQPIIKEIEALSGKTYGFTTPTGPQGGEASAQ--EKTDV 295

Query: 346 AYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIV 405
           A RVVADH+R ++F+IADG  PGN    YV+RRILRRAVRY    L  ++ F   LVN++
Sbjct: 296 AMRVVADHLRAVAFSIADGQLPGNAKAGYVIRRILRRAVRYAYTFLDQKEAFIYKLVNVL 355

Query: 406 VKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV--QGK-VLSGQDA 462
           V+ MG+ +PEL  +   I  ++  EE SF +TL KGI+        +  QG+  L G  A
Sbjct: 356 VQEMGEAYPELPAQRELISRVMKEEEDSFLRTLEKGIQLLNADMDTLRSQGRNQLDGVSA 415

Query: 463 FILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADAT 522
           F L+DTYGFPLDLT+L+  E G  VD  GF+  M + + R+R+A   + G  +V+     
Sbjct: 416 FRLFDTYGFPLDLTELICRENGFTVDAAGFDAEMSKQKARARNAAAVENGDWVVL----- 470

Query: 523 AALHKRGVLATDDSFKFIWFQDHKSVI----KAIYTGSEFIESVVPGNEVGIVLASSSFY 578
               + G    D  F    + +H+  I    K     + F E         +VL  + FY
Sbjct: 471 ----REG----DQEFVGYDYTEHECHILRYRKVTQKKTTFFE---------LVLDHTPFY 513

Query: 579 AEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRR 638
            E GGQ+ D+G +     +  V + +      IHI        +    + + C VD D+R
Sbjct: 514 GEMGGQVGDQGVLVSETETIDVIDTKRENNQSIHI---VRQLPQEPTADFMAC-VDTDKR 569

Query: 639 KLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVN 698
              A NHT TH+L++AL++VLGDHV+QKGS V P+ LRFDF+H + V  E LR++E +VN
Sbjct: 570 NASAANHTATHLLDYALKQVLGDHVEQKGSFVSPDTLRFDFAHFQKVTDEELRQVERLVN 629

Query: 699 EQIKAELDVFS-KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWL 757
             I+ +  +   ++  L EAK + G  A+FGE Y D VRVV  G                
Sbjct: 630 RMIREDYPLDEHRDTPLEEAKEM-GAVALFGEKYGDKVRVVRFGP--------------- 673

Query: 758 SISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV-- 815
             S E CGG H  +T     F ++ E  +A G+RRI A+T     +A  A     K V  
Sbjct: 674 --SCEFCGGIHARSTGRIGFFKIVGESSVAAGVRRIEAMTGQTCEEALYALEDTLKYVRS 731

Query: 816 --DDASKIEGSLLEKNQVRKAQKKVAEENLQKAV-KVATETAEAAASNGKPFCISRVEVG 872
             ++A  ++ ++ +  +   A KK  E    +AV + A    E   + G    +  V + 
Sbjct: 732 MFNNAKDLQSTVCKYIEDNAAMKKEIEGFRAQAVDRTAKALVERVQTKGGVNVVKAV-IP 790

Query: 873 LDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQ 932
           +D A+ ++ V KV E+    ++        +K ++   + +       L   + +  A +
Sbjct: 791 VDPASAKDIVFKVRERLPEKLVCVLGSVHDDKPMLSVMLSDDMVSEGNLNAGKMVREAAR 850

Query: 933 PLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAM 969
            ++G  G G+   A   G +A  ++ A+D   E A +
Sbjct: 851 LIQG-GGGGQPHYAQAGGKNADGLSAAVDKVIELAQL 886


>gi|258623803|ref|ZP_05718760.1| alanyl-tRNA synthetase [Vibrio mimicus VM603]
 gi|258583926|gb|EEW08718.1| alanyl-tRNA synthetase [Vibrio mimicus VM603]
          Length = 858

 Score =  592 bits (1527), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 367/924 (39%), Positives = 518/924 (56%), Gaps = 84/924 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR  F  FFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 5   EVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 59

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI++AWE LT V +L
Sbjct: 60  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQL 119

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           P +RL  T +          D+EA DIW K   +PA R++  G K        DNFW+MG
Sbjct: 120 PKERLLVTVY--------ETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMG 171

Query: 232 DTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKH 289
           DTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG+++PLP   
Sbjct: 172 DTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPS 231

Query: 290 VDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRV 349
           VDTG+G ER+++I+Q   SNY+ DVF  +  A   A G +           D  + + RV
Sbjct: 232 VDTGMGIERISAIMQGVHSNYEIDVFQTLIKAAADAIGYQ-----------DLTNQSLRV 280

Query: 350 VADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVM 409
           VADHIR+ +F I DG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF+ LV  + +VM
Sbjct: 281 VADHIRSCAFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LSAQGAFFHKLVGPLAEVM 339

Query: 410 GDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTY 469
           G    ELK+++A + +++  EE +FG+TL +G+    +A   + G+VL G+  F L+DTY
Sbjct: 340 GTAGVELKKQQALVEKVLRIEEENFGRTLDRGMSILNEALDQLSGQVLDGETVFKLYDTY 399

Query: 470 GFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRG 529
           GF  DLT  +A ERG  +D  GF  AM+E R+R+R A      G    D +   AL K  
Sbjct: 400 GFLADLTNDVARERGFSIDETGFEQAMEEQRQRAREA------GQFGTDYN---ALIKS- 449

Query: 530 VLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEG 589
             AT+  F        +SV++ I+     + ++  G++  IVL ++ FYAE GGQ  D G
Sbjct: 450 --ATNTEFCGYTASRGQSVVREIFVEGAEVSALSAGDKAIIVLDNTPFYAESGGQCGDTG 507

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
            ++   G F+V +    G  + H G L +G    + G++V   VD  RR  I+ NH+ TH
Sbjct: 508 VLKTEAGVFHVEDTHKLGNAIAHHGVLAQGV--LAKGDQVDAIVDEQRRAAISLNHSATH 565

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +L+ ALR+VLG+HV QKGS+V  E LRFDFSH + +    ++ +E +VN++I+    + +
Sbjct: 566 LLHAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTATEIKEVERLVNQEIRRNHSIET 625

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
               + EAK   G  A+FGE Y D VRV+++G                  S ELCGG H 
Sbjct: 626 NIMNIDEAKA-KGAMALFGEKYDDQVRVLSMG----------------DFSTELCGGIHA 668

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVT--TGLAYKAFEAACSLEKEVDDASKIEGSLLE 827
           SNT +   F + SE GIA GIRRI AVT    L Y   + A    K V+ A+K    LLE
Sbjct: 669 SNTGDIGLFKITSEGGIAAGIRRIEAVTGEGALDYIEAQQAQHDAKVVEMAAK--AKLLE 726

Query: 828 KNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIE 887
           K ++++ + K+A +     +    + A      G    ++ +  G D  A+R  V  +  
Sbjct: 727 K-EIQQLKDKLAAKESAGLINQVKQIA------GVNVLVAELN-GADNKALRGMVDDLKN 778

Query: 888 QKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLAS 947
           Q G  +++   +    K  + AGV   SD + +++  E +      + G+ G G+  +A 
Sbjct: 779 QLGSGIIMLG-NIAEGKVGLIAGVT--SDLTNKVKAGELVNMVALQVGGK-GGGRPDMAQ 834

Query: 948 GQGTDAAQVTPAMDLAAEFAAMKL 971
             GTDA  +  A++    + A +L
Sbjct: 835 AGGTDAHALPSALESVDAWIAERL 858


>gi|398922133|ref|ZP_10660132.1| alanine--tRNA ligase [Pseudomonas sp. GM49]
 gi|398163349|gb|EJM51512.1| alanine--tRNA ligase [Pseudomonas sp. GM49]
          Length = 873

 Score =  592 bits (1527), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 361/895 (40%), Positives = 504/895 (56%), Gaps = 94/895 (10%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F +FFE++ H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLRFFEEQGHTRVASSSLIPGNDPTLLFTNAGMNQFKDCFLGQ-----EKRAY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           TRA ++QKC+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AW  LT  K
Sbjct: 58  TRAVSSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAISYAWNFLTSDK 117

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFW 228
              LP ++L+ T +        A D+EA DIW K +  PA R++  G         DNFW
Sbjct: 118 WLNLPKEKLWVTVY--------ASDDEAYDIWTKEIGVPAERMVRIGDNKGAPYASDNFW 169

Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
            MGDTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG L PLP
Sbjct: 170 TMGDTGPCGPCTEIFYDHGADIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLP 229

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
           A  VDTG+G ER++++LQ+  SNY+ D+F  +  A  +A G             +    +
Sbjct: 230 APSVDTGMGLERISAVLQHVHSNYEIDLFQSLLKASAKAIGC-----------TNDAQAS 278

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            +VVADHIR+  F IADG  P NEGR YVLRRI+RRA R+G++ L A+  FF  +V  +V
Sbjct: 279 LKVVADHIRSCGFLIADGVLPSNEGRGYVLRRIIRRACRHGNK-LGAKGSFFYQIVAALV 337

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
             MG+ FPELK ++AHI  ++ AEE  F KTL +G++  ++   +++G V+ G   F L+
Sbjct: 338 AEMGEAFPELKSQQAHIERVLKAEEEQFAKTLEQGLKILEQDLAELKGDVVPGDVVFKLY 397

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFP+DLT  +A ER L +D EGF   M+  R R+RSA       +  MD ++     
Sbjct: 398 DTYGFPMDLTGDIARERSLTIDEEGFEREMEAQRVRARSAS------SFGMDYNS----- 446

Query: 527 KRGVLATDDSFKFIWFQDHKSVIK--AIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
              ++  D   +F  +  H    K  A+Y   + ++ +  G E  IVL  + FYAE GGQ
Sbjct: 447 ---LVKVDVDTEFTGYTAHSGSAKIVALYKDGQSVDVLSEGEEGVIVLDKTPFYAESGGQ 503

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           I D GF++     F VR+    GG  +H G L  G+    VG  V   VD + R   + N
Sbjct: 504 IGDCGFLQAGAARFDVRDTTKTGGAFLHHGVLDSGS--LIVGTPVETHVDAEVRHATSLN 561

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ ALR+VLGDHV QKGS+V  ++LRFDFSH + + PE L+ +E IVN +I+  
Sbjct: 562 HSATHLLHAALRQVLGDHVQQKGSLVDSQRLRFDFSHFEAIKPEQLKALEDIVNAEIRKN 621

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
            +V ++E  +  AK   G  A+FGE Y D VRV+++G                  S ELC
Sbjct: 622 SEVETEETDIDTAKK-KGAMALFGEKYGDNVRVLSMG----------------DFSVELC 664

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGS 824
           GG H + T +     ++SE G+A G+RRI AVT   A     AA    KE   AS ++GS
Sbjct: 665 GGIHANRTGDIGLLKIISEGGVASGVRRIEAVTGAQALAYLNAAEEQLKEA--ASLVKGS 722

Query: 825 ----------LLEKNQVRKAQKKVAEENLQ-KAVKVATETAEAAASNGKPFCISRVEV-G 872
                     +LE+N++ + Q     E LQ KA   A +   A A + K   +  V + G
Sbjct: 723 RDNLIDKLSAVLERNRLLEKQL----EQLQAKAASAAGDDLSAQALDVKDVKVLAVRLDG 778

Query: 873 LDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWL 927
            D  A+   V ++  + G  V++  +     K V+ AGV +  D + QL+  + +
Sbjct: 779 QDGKALLALVDQLKNKLGRAVILLGSVH-EEKVVLVAGVTK--DLTGQLKAGDLM 830


>gi|261210116|ref|ZP_05924414.1| alanyl-tRNA synthetase [Vibrio sp. RC341]
 gi|260840881|gb|EEX67423.1| alanyl-tRNA synthetase [Vibrio sp. RC341]
          Length = 860

 Score =  592 bits (1527), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 365/927 (39%), Positives = 515/927 (55%), Gaps = 90/927 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR  F  FFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI++AWE LT V +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTGVLQL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           P +RL  T +          D+EA DIW K   +PA R++  G K        DNFW+MG
Sbjct: 122 PKERLLVTVY--------ETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKH 289
           DTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG+++PLP   
Sbjct: 174 DTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPS 233

Query: 290 VDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRV 349
           VDTG+G ER+++I+Q   SNY+ DVF  +  A  +A G +           D  + + RV
Sbjct: 234 VDTGMGIERISAIMQGVHSNYEIDVFQTLIKAAAEAIGYQ-----------DLTNQSLRV 282

Query: 350 VADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVM 409
           VADHIR+ +F I DG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF+ LV  + +VM
Sbjct: 283 VADHIRSCAFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGAFFHKLVGPLAEVM 341

Query: 410 GDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTY 469
           G    ELK+++A + +++  EE +FG+TL +G+     A   + G+VL G+  F L+DTY
Sbjct: 342 GTAGAELKKQQALVEKVLRIEEENFGRTLDRGMSILNDALDQLSGQVLDGETVFKLYDTY 401

Query: 470 GFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRG 529
           GFP DLT  +A ERG  +D  GF  AM+E R+R+R A      G    D ++        
Sbjct: 402 GFPADLTNDVARERGFSIDEAGFEKAMEEQRQRAREA------GQFGTDYNSLIK----- 450

Query: 530 VLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEG 589
             AT+  F        +SV++ ++     + ++  G++  IVL ++ FYAE GGQ  D G
Sbjct: 451 -SATNTEFCGYTASRGQSVVREMFVEGAEVSALSAGDKAIIVLDNTPFYAESGGQCGDTG 509

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
            ++   G F+V +    G  + H G L +G    + G++V   VD  RR  I+ NH+ TH
Sbjct: 510 VLKTEAGIFHVEDTHKLGNAIAHHGILAQGV--LAKGDQVEAIVDEQRRAAISLNHSATH 567

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +L+ ALR+VLG+HV QKGS+V  E LRFDFSH + +    ++ +E +VN++I+    + +
Sbjct: 568 LLHAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTAAEIKEVERLVNQEIRRNHHIET 627

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
               + EAK   G  A+FGE Y D VRV+++G                  S ELCGG H 
Sbjct: 628 HIMNIDEAKA-KGAMALFGEKYDDQVRVLSMG----------------DFSTELCGGIHA 670

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVT--TGLAYKAFEAACSLEKEVDDASKIEGSLLE 827
           SNT +   F ++SE GIA GIRRI AVT    L Y   + A    K V+ A+K    LLE
Sbjct: 671 SNTGDIGLFKIISEGGIAAGIRRIEAVTGEGALDYIEAQQAQHDAKVVEMAAK--AKLLE 728

Query: 828 KNQVRKAQKKVAEEN---LQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLK 884
           K   +   K  A+E+   + +  ++A      A  NG            D  A+R  V  
Sbjct: 729 KEIQQLKDKLAAKESAGLINQVKQIAGVNVLVAGLNGA-----------DNKALRGMVDD 777

Query: 885 VIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGG 944
           +  Q G  +++   +    K  + AGV   +D + +++  E +      + G+ G G+  
Sbjct: 778 LKNQLGSGIIMLG-NVADGKVGLIAGVT--NDLTSKVKAGELVNMVALQVGGK-GGGRPD 833

Query: 945 LASGQGTDAAQVTPAMDLAAEFAAMKL 971
           +A   GTDA  +  A++    + A +L
Sbjct: 834 MAQAGGTDAHALPSALESVDAWIAERL 860


>gi|445114490|ref|ZP_21377952.1| alanine-tRNA ligase [Prevotella nigrescens F0103]
 gi|444840719|gb|ELX67745.1| alanine-tRNA ligase [Prevotella nigrescens F0103]
          Length = 887

 Score =  592 bits (1526), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 369/935 (39%), Positives = 517/935 (55%), Gaps = 77/935 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++RD+F KFFE K HV   S+P+V  +DPTL+F NAGMNQ+K I LGT DP  +    
Sbjct: 4   ANEIRDSFKKFFESKGHVIVPSAPMVIKDDPTLMFTNAGMNQWKDIILGTKDPEPR---- 59

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK  AI++AWE L  V 
Sbjct: 60  -RRTDSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKEGAIDYAWEYLVDVL 118

Query: 180 RL-PADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGP 238
           +L PAD LY T F G  + G+  D+EA   W K LPA  ++     DNFWEMG+TGPCGP
Sbjct: 119 KLNPAD-LYVTVFEGSPEDGIPRDDEAAKYWAKHLPADHIIDGNKHDNFWEMGETGPCGP 177

Query: 239 CSEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTG 293
           CSEIH D   N + A      LVN D+P  IEIWNIVF+QF R+SDGSL PL    +DTG
Sbjct: 178 CSEIHVDSRSNEEKAQIPGRELVNKDNPQVIEIWNIVFMQFQRKSDGSLSPLSMHVIDTG 237

Query: 294 LGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGAR----PYSGKVG--ADDADKVDMAY 347
           +GFERL  +LQ K SNYDTD+F P    I++ +G +      SGK G    + +K+D+A 
Sbjct: 238 MGFERLVRMLQGKNSNYDTDIFQPTIKEIERLSGKKYGFTTPSGKNGEAKTEQEKIDIAM 297

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RV+ADH+R ++F+IAD   PGN    YV+RRILRRAVRY    L  ++ F   L+N  + 
Sbjct: 298 RVIADHMRAVAFSIADSQLPGNAKAGYVIRRILRRAVRYAYTFLNQKEAFIYKLLNTFIH 357

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV--QGKV-LSGQDAFI 464
            MG  +PEL  +   I  +I  EE SF +TL KGI        ++  QGK  LSG++AF 
Sbjct: 358 EMGGAYPELTAQRELIVRVIKEEEDSFLRTLEKGINLLTNTMDEMKAQGKTELSGKEAFR 417

Query: 465 LWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAA 524
           L+DTYGFPLDLT+L+  E G  VD   F   M + + R+R+A   +    +V+       
Sbjct: 418 LFDTYGFPLDLTELICREHGFGVDERQFEEEMAQQKARARNAAAVENSDWVVLREGEQKF 477

Query: 525 LHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
           +   G   T+     + ++      K     + F E         +VL  + FY E GGQ
Sbjct: 478 V---GYDYTEYECHILRYR------KVTQKKNTFYE---------LVLDHTPFYGEMGGQ 519

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           + D+G +     +  + + +      IHI          +V  + +  VD D+R   A N
Sbjct: 520 VGDQGVLVSEDETIDIVDTKRENNQSIHIVKQLPK----NVEADFMACVDTDKRDASAAN 575

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           HT TH+L++AL++VLG+H +QKGS V P+ LRFDFSH + V  E LR++E +VN+ I+ +
Sbjct: 576 HTATHLLDYALKQVLGEHCEQKGSYVSPDTLRFDFSHFQKVTDEELRQVERLVNDMIRQD 635

Query: 705 LDVFS-KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAEL 763
                 ++  LAEAK + G  A+FGE Y D VRV+  G                  S E 
Sbjct: 636 FPCGEYRDTPLAEAKEM-GAVALFGEKYGDKVRVIKFGP-----------------SCEF 677

Query: 764 CGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLA----YKAFEAACSLEKEVDDAS 819
           CGG H ++T     F ++SE  +A G+RRI A+T        Y   +    L+   ++A 
Sbjct: 678 CGGIHATSTGRIGFFKIISESSVAAGVRRIEALTGKRCEETIYLLEDTVRDLKAMFNNAK 737

Query: 820 KIEGSLLEKNQVRKAQKKVAEENLQKAV-KVATETAEAAAS-NGKPFCISRVEVGLDAAA 877
            + G + +  Q   A +K  E   Q+ V ++A    E A + NG    + +  + ++ A+
Sbjct: 738 DLRGVVEKYIQEHDAMRKQMENFRQQTVARLANSLVEGAETVNG--VKVVKAVLPVEPAS 795

Query: 878 VREAVLKV---IEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPL 934
            ++ V KV   I +K +  ++ ST E  NK ++   + +   +   L     +  A + +
Sbjct: 796 AKDIVFKVRAAIPEK-LVCVLGSTYE--NKPLLSIMLSDDMVKDHDLNAGTIIREAARLI 852

Query: 935 KGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAM 969
           KG  G G+   A   G D   VT A+D A E A +
Sbjct: 853 KG-GGGGQPHYAQAGGKDVEGVTAAVDKAVELANL 886


>gi|340349787|ref|ZP_08672790.1| alanine--tRNA ligase [Prevotella nigrescens ATCC 33563]
 gi|339609990|gb|EGQ14851.1| alanine--tRNA ligase [Prevotella nigrescens ATCC 33563]
          Length = 889

 Score =  592 bits (1526), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 369/935 (39%), Positives = 516/935 (55%), Gaps = 77/935 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++RD+F KFFE K HV   S+P+V  +DPTL+F NAGMNQ+K I LGT DP  +    
Sbjct: 6   ANEIRDSFKKFFESKGHVIVPSAPMVIKDDPTLMFTNAGMNQWKDIILGTKDPEPR---- 61

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK  AI++AWE L  V 
Sbjct: 62  -RRTDSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKEGAIDYAWEYLVDVL 120

Query: 180 RL-PADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGP 238
           +L PAD LY T F G  + G+  D+EA   W K LPA  ++     DNFWEMG+TGPCGP
Sbjct: 121 KLNPAD-LYVTVFEGSPEDGIPRDDEAAKYWAKHLPADHIIDGNKHDNFWEMGETGPCGP 179

Query: 239 CSEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTG 293
           CSEIH D   N + A      LVN D+P  IEIWNIVF+QF R+SDGSL PL    +DTG
Sbjct: 180 CSEIHVDSRSNEEKAQTPGRELVNKDNPQVIEIWNIVFMQFQRKSDGSLSPLSMHVIDTG 239

Query: 294 LGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGAR----PYSGKVG--ADDADKVDMAY 347
           +GFERL  +LQ K SNYDTD+F P    I++ +G +      SGK G    + +K+D+A 
Sbjct: 240 MGFERLVRMLQGKNSNYDTDIFQPTIKEIERLSGKKYGFTTPSGKNGEAKTEQEKIDIAM 299

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RV+ADH+R ++F+IAD   PGN    YV+RRILRRAVRY    L  ++ F   L+N  + 
Sbjct: 300 RVIADHMRAVAFSIADSQLPGNAKAGYVIRRILRRAVRYAYTFLNQKEAFIYKLLNTFIH 359

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV--QGKV-LSGQDAFI 464
            MG  +PEL  +   I  +I  EE SF +TL KGI        ++  QGK  LSG++AF 
Sbjct: 360 EMGGAYPELTAQRELIVRVIKEEEDSFLRTLEKGINLLTNTMDEMKAQGKTELSGKEAFR 419

Query: 465 LWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAA 524
           L+DTYGFPLDLT+L+  E G  VD   F   M + + R+R+A   +    +V+       
Sbjct: 420 LFDTYGFPLDLTELICREHGFSVDGRQFEEEMAQQKARARNAAAVENSDWVVLREGEQKF 479

Query: 525 LHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
           +   G   T+     + ++      K     + F E         +VL  + FY E GGQ
Sbjct: 480 V---GYDYTEYECHILRYR------KVTQKKNTFYE---------LVLDHTPFYGEMGGQ 521

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           I D+G +     +  + + +      IHI          +V  + +  VD D+R   A N
Sbjct: 522 IGDQGVLVSEDETIDIVDTKRENNQSIHIVKQLPK----NVEADFMACVDTDKRDASAAN 577

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           HT TH+L++AL++VLG+H +QKGS V P+ LRFDFSH + V  E LR++E +VN+ I+ +
Sbjct: 578 HTATHLLDYALKQVLGEHCEQKGSYVSPDTLRFDFSHFQKVTDEELRQVERLVNDMIRQD 637

Query: 705 LDVFS-KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAEL 763
                 ++  L EAK + G  A+FGE Y D VRV+  G                  S E 
Sbjct: 638 FPCGEYRDTPLEEAKEM-GAVALFGEKYGDKVRVIKFGP-----------------SCEF 679

Query: 764 CGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLA----YKAFEAACSLEKEVDDAS 819
           CGG H ++T     F ++SE  +A G+RRI A+T        Y   +    L+   ++A 
Sbjct: 680 CGGIHATSTGRIGFFKIISESSVAAGVRRIEALTGKRCEETIYLLEDTVRDLKAMFNNAK 739

Query: 820 KIEGSLLEKNQVRKAQKKVAEENLQKAV-KVATETAEAAAS-NGKPFCISRVEVGLDAAA 877
            + G + +  Q   A +K  E   Q+ V ++A    E A + NG    + +  + ++ A+
Sbjct: 740 DLRGVVEKYIQEHDAMRKQMENFRQQTVARLANSLVEGAETVNG--VKVVKAVLPVEPAS 797

Query: 878 VREAVLKV---IEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPL 934
            ++ V KV   I +K +  ++ ST E  NK ++   + +   +   L     +  A + +
Sbjct: 798 AKDIVFKVRAAIPEK-LVCILGSTYE--NKPLLSIMLSDDMVKDHDLNAGTIIREAARLI 854

Query: 935 KGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAM 969
           KG  G G+   A   G D   VT A+D A E A +
Sbjct: 855 KG-GGGGQPHYAQAGGKDVEGVTAAVDKAVELANL 888


>gi|313887310|ref|ZP_07821001.1| alanine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
 gi|312923229|gb|EFR34047.1| alanine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
          Length = 871

 Score =  592 bits (1526), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 332/765 (43%), Positives = 456/765 (59%), Gaps = 62/765 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A  +R  F  FFE+  H    S+P+V  +DPTL+F NAGMNQ+K I LG  +P  +    
Sbjct: 3   AHDIRQAFLDFFEEHGHRIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNKEPQYR---- 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            RA ++QKC+R  GKHNDL++VG+DTYHHT FEMLGNWSFGDYFK EAI++AW  LT+  
Sbjct: 59  -RAADSQKCLRVSGKHNDLEEVGRDTYHHTMFEMLGNWSFGDYFKREAIKYAWTFLTERL 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +LP DRLY T FGG  + GL+ D+EA   WL++    R++    KDNFWEMGDTGPCGPC
Sbjct: 118 QLPKDRLYVTVFGGSPEEGLSRDDEAASYWLQYTTEDRIIDGSRKDNFWEMGDTGPCGPC 177

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     +  +     LVN D P  IEIWN+VF+Q++R+ DG L+PLP K +DTG+
Sbjct: 178 SEIHIDLRSEEERQAVCGRDLVNKDHPLVIEIWNLVFMQYDRKVDGHLEPLPHKVIDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   +Q K SNYDTD+F P+  AI+  +G      + G +  ++VD+A RVVADHI
Sbjct: 238 GFERLCMAMQGKKSNYDTDLFTPLIRAIETLSGE-----QYGQN--EQVDIAMRVVADHI 290

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++FAIADG  P N    YV+RRILRRAVRY    L A +     L+  + +VMG+ +P
Sbjct: 291 RTIAFAIADGQLPSNAKAGYVIRRILRRAVRYAYTFLHADEPMLYTLLPTLNEVMGEAYP 350

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV--QGKVLSGQDAFILWDTYGFP 472
           E+  +   I  +I  EE SF +TL +G++  +   Q++    KVLSG DAF+L+DTYGFP
Sbjct: 351 EIVAQRELIASVIKEEEESFLRTLAQGLKLLESKIQELPQDAKVLSGADAFVLYDTYGFP 410

Query: 473 LDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLA 532
           LDLT+L+  ERG+ +D   F+  M E + R+R A    A    V+D + T         +
Sbjct: 411 LDLTELILSERGMTLDQVAFDKLMQEQKSRARQAAAIDAADWEVLDEETTE--------S 462

Query: 533 TDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIE 592
           T   ++ +  + H    + +             +   +VLA + FYAE GGQI D+G + 
Sbjct: 463 TFVGYETLQIETHILRYRKVADKKR--------SYYQVVLAETPFYAEMGGQIGDKGVLI 514

Query: 593 GLFGSFY-VRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHML 651
              G+ Y + + +      +HI S      +    +  I +V  + R L   NHT TH++
Sbjct: 515 AQDGTEYPIIDTKRENNLPVHILSTLPANPK----QPFIARVGDELRHLTEANHTATHLM 570

Query: 652 NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDV-FSK 710
           + ALR VLG HV+QKGS+V  + LRFDFSH K V PE +  +E +VN +I+A+      +
Sbjct: 571 HHALRAVLGTHVEQKGSLVSADLLRFDFSHFKKVTPEEIAEVERLVNAEIRADRPRDEQR 630

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
              +A+AK + G  A+FGE Y D VRV+  G                  S ELCGGTH++
Sbjct: 631 NVPIAKAKEM-GAMALFGEKYGDEVRVIKYGD-----------------SVELCGGTHVA 672

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV 815
           +T +   F ++SE  IA GIRRI AVT     KA E    LE+++
Sbjct: 673 STGQIGFFKIISEGSIAAGIRRIEAVT---GPKAEEYVHHLEEQL 714


>gi|332299295|ref|YP_004441216.1| alanyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
 gi|332176358|gb|AEE12048.1| alanyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
          Length = 872

 Score =  592 bits (1526), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 332/765 (43%), Positives = 456/765 (59%), Gaps = 62/765 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A  +R  F  FFE+  H    S+P+V  +DPTL+F NAGMNQ+K I LG  +P  +    
Sbjct: 4   AHDIRQAFLDFFEEHGHRIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNKEPQYR---- 59

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            RA ++QKC+R  GKHNDL++VG+DTYHHT FEMLGNWSFGDYFK EAI++AW  LT+  
Sbjct: 60  -RAADSQKCLRVSGKHNDLEEVGRDTYHHTMFEMLGNWSFGDYFKREAIKYAWTFLTERL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +LP DRLY T FGG  + GL+ D+EA   WL++    R++    KDNFWEMGDTGPCGPC
Sbjct: 119 QLPKDRLYVTVFGGSPEEGLSRDDEAASYWLQYTTEDRIIDGSRKDNFWEMGDTGPCGPC 178

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     +  +     LVN D P  IEIWN+VF+Q++R+ DG L+PLP K +DTG+
Sbjct: 179 SEIHIDLRSEEERQAVCGRDLVNKDHPLVIEIWNLVFMQYDRKVDGHLEPLPHKVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   +Q K SNYDTD+F P+  AI+  +G      + G +  ++VD+A RVVADHI
Sbjct: 239 GFERLCMAMQGKKSNYDTDLFTPLIRAIETLSGE-----QYGQN--EQVDIAMRVVADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++FAIADG  P N    YV+RRILRRAVRY    L A +     L+  + +VMG+ +P
Sbjct: 292 RTIAFAIADGQLPSNAKAGYVIRRILRRAVRYAYTFLHADEPMLYTLLPTLNEVMGEAYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV--QGKVLSGQDAFILWDTYGFP 472
           E+  +   I  +I  EE SF +TL +G++  +   Q++    KVLSG DAF+L+DTYGFP
Sbjct: 352 EIVAQRELIASVIKEEEESFLRTLAQGLKLLESKIQELPQDAKVLSGADAFVLYDTYGFP 411

Query: 473 LDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLA 532
           LDLT+L+  ERG+ +D   F+  M E + R+R A    A    V+D + T         +
Sbjct: 412 LDLTELILSERGMTLDQVAFDKLMQEQKSRARQAAAIDAADWEVLDEETTE--------S 463

Query: 533 TDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIE 592
           T   ++ +  + H    + +             +   +VLA + FYAE GGQI D+G + 
Sbjct: 464 TFVGYETLQIETHILRYRKVADKKR--------SYYQVVLAETPFYAEMGGQIGDKGVLI 515

Query: 593 GLFGSFY-VRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHML 651
              G+ Y + + +      +HI S      +    +  I +V  + R L   NHT TH++
Sbjct: 516 AQDGTEYPIIDTKRENNLPVHILSTLPANPK----QPFIARVGDELRHLTEANHTATHLM 571

Query: 652 NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDV-FSK 710
           + ALR VLG HV+QKGS+V  + LRFDFSH K V PE +  +E +VN +I+A+      +
Sbjct: 572 HHALRAVLGTHVEQKGSLVSADLLRFDFSHFKKVTPEEIAEVERLVNAEIRADRPRDEQR 631

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
              +A+AK + G  A+FGE Y D VRV+  G                  S ELCGGTH++
Sbjct: 632 NVPIAKAKEM-GAMALFGEKYGDEVRVIKYGD-----------------SVELCGGTHVA 673

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV 815
           +T +   F ++SE  IA GIRRI AVT     KA E    LE+++
Sbjct: 674 STGQIGFFKIISEGSIAAGIRRIEAVT---GPKAEEYVHHLEEQL 715


>gi|423301760|ref|ZP_17279783.1| alanyl-tRNA synthetase [Bacteroides finegoldii CL09T03C10]
 gi|408470851|gb|EKJ89383.1| alanyl-tRNA synthetase [Bacteroides finegoldii CL09T03C10]
          Length = 872

 Score =  592 bits (1525), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 328/747 (43%), Positives = 444/747 (59%), Gaps = 61/747 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++RD+F  FFE K H    S+P+V  +DPTL+F NAGMNQ+K I LG        +K 
Sbjct: 4   AKEIRDSFKNFFESKGHHIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGN-----HPAKY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWE L  V 
Sbjct: 59  KRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAWEYLVDVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +L  + LYAT F G  + GL+ D+EA   W +FLP   ++     DNFWEMGDTGPCGPC
Sbjct: 119 KLNPEHLYATVFEGSPEEGLSRDDEAASYWEQFLPKDHIINGNKHDNFWEMGDTGPCGPC 178

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + A      LVN+D P  IEIWN+VF+Q+NR++D SL+PLPAK +DTG+
Sbjct: 179 SEIHIDLRPAEERAKISGRDLVNHDHPQVIEIWNLVFMQYNRKADSSLEPLPAKVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF P+  AI   +       + G D   + D+A RV+ADHI
Sbjct: 239 GFERLCMALQGKTSNYDTDVFQPMLKAIAAMSDT-----EYGKD--KQQDIAMRVIADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++F+I DG  P N    YV+RRILRRAVRYG   L  +  F   L+ ++++ MG+ +P
Sbjct: 292 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLIENMGEAYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ--GKV-LSGQDAFILWDTYGF 471
           EL  ++  I ++I  EE SF +TL  GI    K  +D +  GK  +SG+DAF L+DT+GF
Sbjct: 352 ELIAQKTLIEKVIKEEEESFLRTLETGIRLLDKTMEDTKAAGKTEISGKDAFTLYDTFGF 411

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E G+ V+IE FN  M + ++R+R+A   + G  I +    T  +   G  
Sbjct: 412 PLDLTELILRENGMTVNIEEFNEEMQQQKQRARNAAAIETGDWITLKEGTTEFV---GYD 468

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            T+     + ++  +   + +Y                IVL  + FYAE GGQ+ D G +
Sbjct: 469 YTEYEASILRYRQIRQKNQTLYQ---------------IVLDYTPFYAESGGQVGDTGVL 513

Query: 592 EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHML 651
              F +  V + +      IHI   T+          + C VD D+R   A NH+ TH+L
Sbjct: 514 VSEFETIEVIDTKKENNLPIHI---TKKLPEHPEAPMMAC-VDTDKRAACAANHSATHLL 569

Query: 652 NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS-K 710
           + ALREVLG+HV+QKGS+V P+ LRFDFSH + V  E +R++E IVN +I+A + +   +
Sbjct: 570 DAALREVLGEHVEQKGSLVTPDSLRFDFSHFQKVTDEEIRKVEHIVNAKIRANIPLKEYR 629

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
              + EAK +  + A+FGE Y D VRV+  G                  S E CGGTH++
Sbjct: 630 NIPIEEAKELGAI-ALFGEKYGDRVRVIQFGS-----------------SIEFCGGTHVA 671

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVT 797
            T       ++SE  +A G+RRI A T
Sbjct: 672 ATGNIGMVKIISESSVAAGVRRIEAYT 698


>gi|60680248|ref|YP_210392.1| alanyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
 gi|81316682|sp|Q5LHE6.1|SYA_BACFN RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|60491682|emb|CAH06434.1| putative alanyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
          Length = 872

 Score =  592 bits (1525), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 329/747 (44%), Positives = 443/747 (59%), Gaps = 61/747 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A + RD+F  FFE K H    S+P+V  +DPTL+F NAGMNQ+K I LG        +K 
Sbjct: 4   AKETRDSFKNFFESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGN-----HPAKY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWE L  V 
Sbjct: 59  HRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAWEYLVDVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +L  + LYAT F G  + GL  DNEA   W ++LP   ++     DNFWEMGDTGPCGPC
Sbjct: 119 KLNPEHLYATVFEGSPEEGLERDNEAASYWEQYLPKDHIINGNKHDNFWEMGDTGPCGPC 178

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + A      LVN+D P  IEIWN+VF+Q+NR++D +L+PLPAK +DTG+
Sbjct: 179 SEIHIDLRPAEERAKISGRDLVNHDHPQVIEIWNLVFMQYNRKADSTLEPLPAKVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF P+  AI Q  G      + G ++ +  D+A RV+ADHI
Sbjct: 239 GFERLCMALQGKTSNYDTDVFQPLIKAIAQMAGT-----EYGKNEQN--DIAMRVIADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++F+I DG  P N    YV+RRILRRAVRYG   L  +  F   L+ +++  MGD +P
Sbjct: 292 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLIDSMGDAYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ--GKV-LSGQDAFILWDTYGF 471
           EL  ++  I ++I  EE SF +TL  GI    K   D +  GK  +SG+DAF L+DT+GF
Sbjct: 352 ELIAQKELIEKVIKEEEESFLRTLETGIRLLDKTMADTKANGKTEISGKDAFTLYDTFGF 411

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E G+ V++E F+  M + ++R+R+A   + G  I++    T  +   G  
Sbjct: 412 PLDLTELILRENGMTVNVEEFDAEMQQQKQRARNAAAIETGDWIILKEGTTEFV---GYD 468

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            T+     + ++  K   + +Y                IVL  + FYAE GGQ+ D G +
Sbjct: 469 YTEYETSILRYRQVKQKNQTLYQ---------------IVLDYTPFYAESGGQVGDTGVL 513

Query: 592 EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHML 651
              F +  V + +      IHI   T+          + C VD D+R   A NH+ TH+L
Sbjct: 514 VNEFETIEVIDTKKENNLPIHI---TKKLPEHPEAPMMAC-VDTDKRAACAANHSATHLL 569

Query: 652 NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS-K 710
           + ALREVLG+HV+QKGS+V P+ LRFDFSH + V  E LR++E +VN +I+A + +   +
Sbjct: 570 DEALREVLGEHVEQKGSLVTPDSLRFDFSHFQKVTDEELRKVEHLVNAKIRANVPLQEHR 629

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
              + EAK + G  A+FGE Y D VRV+  G                  S E CGGTH++
Sbjct: 630 NIPIEEAKEL-GAIALFGEKYGDHVRVIQFGS-----------------SIEFCGGTHVA 671

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVT 797
            T       ++SE  +A G+RRI A T
Sbjct: 672 ATGNIGMVKIISESSVAAGVRRIEAYT 698


>gi|229512814|ref|ZP_04402281.1| alanyl-tRNA synthetase [Vibrio cholerae TMA 21]
 gi|229350063|gb|EEO15016.1| alanyl-tRNA synthetase [Vibrio cholerae TMA 21]
          Length = 860

 Score =  592 bits (1525), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 358/922 (38%), Positives = 514/922 (55%), Gaps = 80/922 (8%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR  F  FFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI++AWE LT V +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           P +RL  T +          D+EA DIW K   +PA R++  G K        DNFW+MG
Sbjct: 122 PKERLLVTVY--------ETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKH 289
           DTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG+++PLP   
Sbjct: 174 DTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPS 233

Query: 290 VDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRV 349
           VDTG+G ER+++I+Q   SNY+ DVF  +  A   A G +           D  + + RV
Sbjct: 234 VDTGMGIERISAIMQGVHSNYEIDVFQTLIKAAADAIGYQ-----------DLTNQSLRV 282

Query: 350 VADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVM 409
           VADHIR+ +F I DG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF+ LV  + +VM
Sbjct: 283 VADHIRSCAFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGAFFHKLVGPLAEVM 341

Query: 410 GDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTY 469
           G    ELK+++A + +++  EE +FG+TL +G+     A   + G+VL G+  F L+DTY
Sbjct: 342 GTAGVELKKQQALVEKVLRIEEENFGRTLDRGMSILNDALDQLSGQVLDGETVFKLYDTY 401

Query: 470 GFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRG 529
           GFP DLT  +A ERG  +D  GF  AM+E R+R+R A      G    D ++        
Sbjct: 402 GFPADLTNDVARERGFSIDEAGFEQAMEEQRQRAREA------GQFGTDYNSLIK----- 450

Query: 530 VLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEG 589
             AT+  F        +SV++ ++     + ++  G++  IVL ++ FYAE GGQ  D G
Sbjct: 451 -SATNTEFCGYTASRGQSVVREMFVEGSEVSTLSAGDKAIIVLDNTPFYAESGGQCGDTG 509

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
            ++   G F+V + Q  G  + H G L +G    +  ++V   VD  RR  I+ NH+ TH
Sbjct: 510 VLKTDAGIFHVEDTQKLGNAIAHHGVLAQGV--LATDDQVDAIVDEKRRAAISLNHSATH 567

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +L+ ALR+VLG+HV QKGS+V  E LRFDFSH + + P  ++ +E +VN++I+   ++ +
Sbjct: 568 LLHAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTPAEIKEVERLVNQEIRHNHNIET 627

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
               + EAK   G  A+FGE Y D VRV+++G                  S ELCGG H 
Sbjct: 628 NIMNIDEAKA-KGAMALFGEKYDDQVRVLSMG----------------DFSTELCGGIHA 670

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKN 829
           SNT +   F ++SE GIA GIRRI AVT   A    +A  +           +  LLEK 
Sbjct: 671 SNTGDIGLFKIISEGGIAAGIRRIEAVTGEGALDYLDAQQAQHDAKVSEMAAKAKLLEK- 729

Query: 830 QVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQK 889
           ++++ + K+A +     +    + A      G    ++++  G D  A+R  V  +  Q 
Sbjct: 730 EIQQLKDKLAAKESAGLINQVKQIA------GVNVLVAQLN-GADNKALRGMVDDLKNQL 782

Query: 890 GMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQ 949
              +++   +    K  + AGV   +D + +++  E +      + G+ G G+  +A   
Sbjct: 783 SSGIIMLG-NVAEGKVGLIAGVT--NDLTNKVKAGELVNMVALQVGGK-GGGRPDMAQAG 838

Query: 950 GTDAAQVTPAMDLAAEFAAMKL 971
           GTDA  +  A++    + A +L
Sbjct: 839 GTDAHALPSALESVDAWIAERL 860


>gi|167753580|ref|ZP_02425707.1| hypothetical protein ALIPUT_01857 [Alistipes putredinis DSM 17216]
 gi|167658205|gb|EDS02335.1| alanine--tRNA ligase [Alistipes putredinis DSM 17216]
          Length = 847

 Score =  592 bits (1525), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 359/826 (43%), Positives = 463/826 (56%), Gaps = 86/826 (10%)

Query: 84  VVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGK 143
           +V  NDPTL+F NAGMNQ+K IFLG            RA +TQKC+R  GKHNDL++VG 
Sbjct: 1   MVVKNDPTLMFTNAGMNQFKDIFLGNIP-----RPYPRAADTQKCLRVSGKHNDLEEVGH 55

Query: 144 DTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDN 203
           DTYHHT FEMLGNWSFGDYFK EAI WAWELLT VY L   R+YAT F G  + G+  D 
Sbjct: 56  DTYHHTMFEMLGNWSFGDYFKKEAIGWAWELLTGVYGLDKSRMYATVFEGSPEDGVPFDQ 115

Query: 204 EARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAAS-----LVNN 258
           EA DIWL++LPA  ++     DNFWEMGD GPCGPCSEIHYD     + A+     +VN 
Sbjct: 116 EAYDIWLQYLPADHIIRGNKHDNFWEMGDVGPCGPCSEIHYDLRDESEIAAVPGREMVNQ 175

Query: 259 DDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPI 318
             P  IEIWN+VF+QFNR+++GSL+PL A  +DTG+GFERL  ILQ K SNYDTDVF P 
Sbjct: 176 GSPLVIEIWNLVFMQFNRKANGSLEPLAANCIDTGMGFERLCMILQGKKSNYDTDVFQPT 235

Query: 319 FDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRR 378
              I   +G + Y    GAD+  K D+A RVVADH+R +SF+IADG  P N    YV+RR
Sbjct: 236 IQRIAAMSG-KTY----GADE--KCDVAMRVVADHLRAISFSIADGQLPSNVKAGYVIRR 288

Query: 379 ILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTL 438
           ILRRAVRYG   L   + F   LV  +V  MG  FPELK ++  I ++I  EE+SF +TL
Sbjct: 289 ILRRAVRYGYTYLGFNEPFICRLVAGLVDQMGGQFPELKAQQTLIEKVIEEEESSFLRTL 348

Query: 439 LKGIEKFKKAAQDVQ---GKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNA 495
             GI        +V+   G+ +SG+DAF+L+DTYGFP+DLT+L+A E+G+ VD+E F   
Sbjct: 349 ATGINLLDGVMAEVRKSGGERISGKDAFLLYDTYGFPIDLTELIAREQGIEVDLEAFEKE 408

Query: 496 MDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTG 555
           +   +ERSR+A       A V   D    +H +         +FI +    + +K     
Sbjct: 409 LQAQKERSRNA-------AAVDTDDWKELIHIK-------QSEFIGYDTLSAEVKI---- 450

Query: 556 SEFIESVVPGN-EVGIVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHI- 613
           + +      G     +V   + FY   GGQI D G+IE       V   +   G +IHI 
Sbjct: 451 ARYRRVSSKGRVSYQLVFDRTPFYGNSGGQIGDIGYIETANERIPVVATEKENGLIIHIV 510

Query: 614 GSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPE 673
             L E           +  VD ++R+  A NHT TH+++ ALR+VLG HV+QKGS+V PE
Sbjct: 511 TQLPENPE-----ATFMAVVDPEKRQAAANNHTATHLMHEALRKVLGTHVEQKGSLVTPE 565

Query: 674 KLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPD 733
            LRFDFSH + V  E LRR+E +VN  I+A   +  K     E     G   +FGE Y D
Sbjct: 566 YLRFDFSHFQKVTHEELRRVEQLVNRAIRANYPLEEKRDATKEEAAAAGAMMLFGEKYGD 625

Query: 734 PVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRI 793
            VR+V  G                  S ELCGGTH+S T     F +L+E  I+ G+RRI
Sbjct: 626 RVRMVRFG-----------------TSVELCGGTHVSATGNIGFFKILNESAISAGVRRI 668

Query: 794 TAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATET 853
            A T   A +   AA    + V D        L   Q+ ++ KK+ E N  +A+K   E 
Sbjct: 669 EATTGAKAEEVIYAAEDTMRNVAD-------YLNNPQILQSIKKIMESN--EALKHEME- 718

Query: 854 AEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTD 899
                       I R +V   AA +   V    E+ GM +M   TD
Sbjct: 719 -----------AIRREQVAEWAAKI---VDSTPERGGMRLMATQTD 750


>gi|53712054|ref|YP_098046.1| alanyl-tRNA synthetase [Bacteroides fragilis YCH46]
 gi|265765389|ref|ZP_06093664.1| alanyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|383117017|ref|ZP_09937764.1| alanyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|423258950|ref|ZP_17239873.1| alanyl-tRNA synthetase [Bacteroides fragilis CL07T00C01]
 gi|423264079|ref|ZP_17243082.1| alanyl-tRNA synthetase [Bacteroides fragilis CL07T12C05]
 gi|59798506|sp|Q64YB4.1|SYA_BACFR RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|52214919|dbj|BAD47512.1| alanyl-tRNA synthetase [Bacteroides fragilis YCH46]
 gi|251947683|gb|EES87965.1| alanyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|263254773|gb|EEZ26207.1| alanyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|387776530|gb|EIK38630.1| alanyl-tRNA synthetase [Bacteroides fragilis CL07T00C01]
 gi|392706345|gb|EIY99468.1| alanyl-tRNA synthetase [Bacteroides fragilis CL07T12C05]
          Length = 872

 Score =  592 bits (1525), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 329/747 (44%), Positives = 443/747 (59%), Gaps = 61/747 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A + RD+F  FFE K H    S+P+V  +DPTL+F NAGMNQ+K I LG        +K 
Sbjct: 4   AKETRDSFKNFFESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGN-----HPAKY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWE L  V 
Sbjct: 59  HRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAWEYLVDVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +L  + LYAT F G  + GL  DNEA   W ++LP   ++     DNFWEMGDTGPCGPC
Sbjct: 119 KLNPEHLYATVFEGSPEEGLERDNEAASYWEQYLPKDHIINGNKHDNFWEMGDTGPCGPC 178

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + A      LVN+D P  IEIWN+VF+Q+NR++D +L+PLPAK +DTG+
Sbjct: 179 SEIHIDLRPAEERAKISGRDLVNHDHPQVIEIWNLVFMQYNRKADSTLEPLPAKVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF P+  AI Q  G      + G ++ +  D+A RV+ADHI
Sbjct: 239 GFERLCMALQGKTSNYDTDVFQPLIKAIAQMAGT-----EYGKNEQN--DIAMRVIADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++F+I DG  P N    YV+RRILRRAVRYG   L  +  F   L+ +++  MGD +P
Sbjct: 292 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLIDSMGDAYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ--GKV-LSGQDAFILWDTYGF 471
           EL  ++  I ++I  EE SF +TL  GI    K   D +  GK  +SG+DAF L+DT+GF
Sbjct: 352 ELIAQKELIEKVIKEEEESFLRTLETGIRLLDKTMADTKANGKTEISGKDAFTLYDTFGF 411

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E G+ V++E F+  M + ++R+R+A   + G  I++    T  +   G  
Sbjct: 412 PLDLTELILRENGMTVNVEEFDAEMQQQKQRARNAAAIETGDWIILKEGTTEFV---GYD 468

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            T+     + ++  K   + +Y                IVL  + FYAE GGQ+ D G +
Sbjct: 469 YTEYETSILRYRQVKQKNQTLYQ---------------IVLDYTPFYAESGGQVGDTGVL 513

Query: 592 EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHML 651
              F +  V + +      IHI   T+          + C VD D+R   A NH+ TH+L
Sbjct: 514 VNEFETIEVIDTKKENNLPIHI---TKKLPEHPEAPMMAC-VDTDKRAACAANHSATHLL 569

Query: 652 NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS-K 710
           + ALREVLG+HV+QKGS+V P+ LRFDFSH + V  E LR++E +VN +I+A + +   +
Sbjct: 570 DEALREVLGEHVEQKGSLVTPDSLRFDFSHFQKVTDEELRKVEHLVNAKIRANVPLQEHR 629

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
              + EAK + G  A+FGE Y D VRV+  G                  S E CGGTH++
Sbjct: 630 NIPIEEAKEL-GAIALFGEKYGDHVRVIQFGS-----------------SIEFCGGTHVA 671

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVT 797
            T       ++SE  +A G+RRI A T
Sbjct: 672 ATGNIGMVKIISESSVAAGVRRIEAYT 698


>gi|423282028|ref|ZP_17260913.1| alanyl-tRNA synthetase [Bacteroides fragilis HMW 615]
 gi|404582515|gb|EKA87209.1| alanyl-tRNA synthetase [Bacteroides fragilis HMW 615]
          Length = 872

 Score =  592 bits (1525), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 329/747 (44%), Positives = 443/747 (59%), Gaps = 61/747 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A + RD+F  FFE K H    S+P+V  +DPTL+F NAGMNQ+K I LG        +K 
Sbjct: 4   AKETRDSFKNFFESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGN-----HPAKY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWE L  V 
Sbjct: 59  HRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAWEYLVDVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +L  + LYAT F G  + GL  DNEA   W ++LP   ++     DNFWEMGDTGPCGPC
Sbjct: 119 KLNPEHLYATVFEGSPEEGLERDNEAASYWEQYLPKDHIINGNKHDNFWEMGDTGPCGPC 178

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + A      LVN+D P  IEIWN+VF+Q+NR++D +L+PLPAK +DTG+
Sbjct: 179 SEIHIDLRPAEERAKISGRDLVNHDHPQVIEIWNLVFMQYNRKADSTLEPLPAKVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF P+  AI Q  G      + G ++ +  D+A RV+ADHI
Sbjct: 239 GFERLCMALQGKTSNYDTDVFQPLIKAIAQMAGT-----EYGKNEQN--DIAMRVIADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++F+I DG  P N    YV+RRILRRAVRYG   L  +  F   L+ +++  MGD +P
Sbjct: 292 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLIDSMGDAYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ--GKV-LSGQDAFILWDTYGF 471
           EL  ++  I ++I  EE SF +TL  GI    K   D +  GK  +SG+DAF L+DT+GF
Sbjct: 352 ELIAQKELIEKVIKEEEESFLRTLETGIRLLDKTMADTKANGKTEISGKDAFTLYDTFGF 411

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E G+ V++E F+  M + ++R+R+A   + G  I++    T  +   G  
Sbjct: 412 PLDLTELILRENGMTVNVEEFDAEMQQQKQRARNAAAIETGDWIILKEGTTEFV---GYD 468

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            T+     + ++  K   + +Y                IVL  + FYAE GGQ+ D G +
Sbjct: 469 YTEYETSILRYRQVKQKNQTLYQ---------------IVLDYTPFYAESGGQVGDTGVL 513

Query: 592 EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHML 651
              F +  V + +      IHI   T+          + C VD D+R   A NH+ TH+L
Sbjct: 514 VNEFETIEVIDTKKENNLPIHI---TKKLPEHPEAPMMAC-VDTDKRAACAANHSATHLL 569

Query: 652 NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS-K 710
           + ALREVLG+HV+QKGS+V P+ LRFDFSH + V  E LR++E +VN +I+A + +   +
Sbjct: 570 DEALREVLGEHVEQKGSLVTPDSLRFDFSHFQKVTDEELRKVEHLVNAKIRANVPLQEHR 629

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
              + EAK + G  A+FGE Y D VRV+  G                  S E CGGTH++
Sbjct: 630 NIPIEEAKEL-GAIALFGEKYGDHVRVIQFGS-----------------SIEFCGGTHVA 671

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVT 797
            T       ++SE  +A G+RRI A T
Sbjct: 672 ATGNIGMVKIISESSVAAGVRRIEAYT 698


>gi|423269339|ref|ZP_17248311.1| alanyl-tRNA synthetase [Bacteroides fragilis CL05T00C42]
 gi|423273098|ref|ZP_17252045.1| alanyl-tRNA synthetase [Bacteroides fragilis CL05T12C13]
 gi|392701133|gb|EIY94293.1| alanyl-tRNA synthetase [Bacteroides fragilis CL05T00C42]
 gi|392708130|gb|EIZ01238.1| alanyl-tRNA synthetase [Bacteroides fragilis CL05T12C13]
          Length = 872

 Score =  592 bits (1525), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 329/747 (44%), Positives = 443/747 (59%), Gaps = 61/747 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A + RD+F  FFE K H    S+P+V  +DPTL+F NAGMNQ+K I LG        +K 
Sbjct: 4   AKETRDSFKNFFESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGN-----HPAKY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWE L  V 
Sbjct: 59  HRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAWEYLVDVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +L  + LYAT F G  + GL  DNEA   W ++LP   ++     DNFWEMGDTGPCGPC
Sbjct: 119 KLNPEHLYATVFEGSPEEGLERDNEAASYWEQYLPKDHIINGNKHDNFWEMGDTGPCGPC 178

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + A      LVN+D P  IEIWN+VF+Q+NR++D +L+PLPAK +DTG+
Sbjct: 179 SEIHIDLRPAEERAKISGRDLVNHDHPQVIEIWNLVFMQYNRKADSTLEPLPAKVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF P+  AI Q  G      + G ++ +  D+A RV+ADHI
Sbjct: 239 GFERLCMALQGKTSNYDTDVFQPLIKAIAQMAGT-----EYGKNEQN--DIAMRVIADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++F+I DG  P N    YV+RRILRRAVRYG   L  +  F   L+ +++  MGD +P
Sbjct: 292 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLIDSMGDAYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ--GKV-LSGQDAFILWDTYGF 471
           EL  ++  I ++I  EE SF +TL  GI    K   D +  GK  +SG+DAF L+DT+GF
Sbjct: 352 ELIAQKELIEKVIKEEEESFLRTLETGIRLLDKTMADTKANGKTEISGKDAFTLYDTFGF 411

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E G+ V++E F+  M + ++R+R+A   + G  I++    T  +   G  
Sbjct: 412 PLDLTELILRENGMTVNVEEFDAEMQQQKQRARNAAAIETGDWIILKEGTTEFV---GYD 468

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            T+     + ++  K   + +Y                IVL  + FYAE GGQ+ D G +
Sbjct: 469 YTEYETSILRYRQVKQKNQTLYQ---------------IVLDYTPFYAESGGQVGDTGVL 513

Query: 592 EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHML 651
              F +  V + +      IHI   T+          + C VD D+R   A NH+ TH+L
Sbjct: 514 VNEFETIEVIDTKKENNLPIHI---TKKLPEHPEAPMMAC-VDTDKRAACAANHSATHLL 569

Query: 652 NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS-K 710
           + ALREVLG+HV+QKGS+V P+ LRFDFSH + V  E LR++E +VN +I+A + +   +
Sbjct: 570 DEALREVLGEHVEQKGSLVTPDSLRFDFSHFQKVTDEELRKVEHLVNAKIRANVPLQEHR 629

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
              + EAK + G  A+FGE Y D VRV+  G                  S E CGGTH++
Sbjct: 630 NIPIEEAKEL-GAIALFGEKYGDHVRVIQFGS-----------------SIEFCGGTHVA 671

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVT 797
            T       ++SE  +A G+RRI A T
Sbjct: 672 ATGNIGMVKIISESSVAAGVRRIEAYT 698


>gi|392420525|ref|YP_006457129.1| alanyl-tRNA ligase [Pseudomonas stutzeri CCUG 29243]
 gi|390982713|gb|AFM32706.1| alanyl-tRNA ligase [Pseudomonas stutzeri CCUG 29243]
          Length = 874

 Score =  592 bits (1525), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 369/938 (39%), Positives = 522/938 (55%), Gaps = 92/938 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F +FFE+K H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLRFFEEKGHTRVASSSLIPANDPTLLFTNAGMNQFKDCFLGL-----EKRAY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           TRA  +QKC+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT  K
Sbjct: 58  TRATTSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIIYAWEFLTSEK 117

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFW 228
              LP ++L+ T +        A D+EA DIW K   +PA R++  G         DNFW
Sbjct: 118 WLNLPKEKLWVTVY--------ASDDEAYDIWTKEVGVPAERMVRIGDNKGAPYASDNFW 169

Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
            MGDTGPCGPC+EI +D   +           D    IEIWN VF+QFNR +DG + PLP
Sbjct: 170 AMGDTGPCGPCTEIFFDHGEHIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVMHPLP 229

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
           A  VDTG+G ER++++LQ+  SNY+ D+F  + +A   A G            A++   +
Sbjct: 230 APSVDTGMGLERISAVLQHVNSNYEIDLFQSLLNAAADAIGC-----------ANEGQAS 278

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            +VVADHIR+  F IADG  P NEGR YVLRRI+RRA R+G++ L A+  FF+ +V  +V
Sbjct: 279 LKVVADHIRSCGFLIADGVTPSNEGRGYVLRRIVRRACRHGNK-LGAKGSFFHRIVAALV 337

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
             MGD FPELKQ++AHI  ++  EE  F KTL +G++  ++    + G V+ G   F L+
Sbjct: 338 AEMGDAFPELKQQQAHIERVLKNEEEQFAKTLEQGLKILEQDLAGLTGSVIPGDVVFKLY 397

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFP+DLT  +A ER L +D +GF   M   RER+RSA       A  MD ++     
Sbjct: 398 DTYGFPVDLTGDIARERNLTLDEDGFEREMQAQRERARSAS------AFGMDYNS----- 446

Query: 527 KRGVLATDDSFKFIWFQDHKSVIK--AIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
              ++  +   +FI +Q      K  A++     ++S+  G E  +VL  + FYAE GGQ
Sbjct: 447 ---LVKVEGETRFIGYQGTSGAGKVLALFKEGMVVDSLNAGEEGVVVLDQTPFYAESGGQ 503

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           I D G+++     F VR+    G   +H G +   +G   VG +V   VD   R+  A N
Sbjct: 504 IGDCGYLKAQGLRFDVRDTSKAGSAFLHHGIVD--SGTLHVGADVEATVDASVRQATALN 561

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ ALRE+LG+HV QKGS+V  ++LRFDFSH + + PE LR +E  VN +I+  
Sbjct: 562 HSATHLLHAALREILGEHVSQKGSLVDSQRLRFDFSHFEAIKPEQLRALEDRVNAEIRRN 621

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
             V  +E  +  AK   G  A+FGE Y D VRV+ +G                  S ELC
Sbjct: 622 SAVEIEETDIDTAKA-KGAMALFGEKYGDSVRVLTMGG---------------GFSVELC 665

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGS 824
           GGTH++ T +   F + SE G+A G+RRI AVT   A     AA    KE   A+ ++GS
Sbjct: 666 GGTHVNRTGDIGLFKITSEGGVAAGVRRIEAVTGAPALAYLNAAEEQLKEA--ANLVKGS 723

Query: 825 LLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEV-----------GL 873
              ++ +      + E N Q   ++    A+AA++ G     S ++V           GL
Sbjct: 724 ---RDNLLDKLGGILERNRQLEKELEQLKAKAASAAGNDLATSALDVKGVRVLAARQDGL 780

Query: 874 DAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQP 933
           D  A+   V ++  + G  V++    +  +K V+ AGV +  D + +L+  + L      
Sbjct: 781 DGKALLALVDQLKNKLGSAVILLGGVQ-DDKVVLVAGVTQ--DLTGRLKAGD-LMKQAAA 836

Query: 934 LKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
             G  G G+  +A G G++ A++  A+ LA  F    L
Sbjct: 837 AVGGKGGGRPDMAQGGGSEPAKLDNALALAVPFTEHGL 874


>gi|365835405|ref|ZP_09376825.1| alanine--tRNA ligase [Hafnia alvei ATCC 51873]
 gi|364566167|gb|EHM43866.1| alanine--tRNA ligase [Hafnia alvei ATCC 51873]
          Length = 875

 Score =  591 bits (1524), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 360/935 (38%), Positives = 524/935 (56%), Gaps = 91/935 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  F+  K H   +SS +VP NDPTLLF NAGMNQ+K +FLG    +      +R
Sbjct: 7   EIRQAFLDFYHSKGHQIVESSSLVPNNDPTLLFTNAGMNQFKDVFLGIDKRS-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT    +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP ++L+ T +          D+EA +IW     +P  R++  G         DNFW+M
Sbjct: 122 NLPKEKLWVTVY--------ETDDEAFNIWADEVGVPRERIIRIGDNKGAPFASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR+SDG++ PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSAEEDGDRYIEIWNIVFMQFNRQSDGTMLPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A  + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIAATAKVTGATDLSSK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F ++DG  P NEGR YVLRRI+RRAVR+G+ ++ A++ FF  LV  +++V
Sbjct: 283 VIADHIRSCAFLVSDGVLPSNEGRGYVLRRIIRRAVRHGN-MVGAKETFFYKLVAPLIEV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    ELK++++ + +++  EE  F +TL +G+         + G  L G+ AF L+DT
Sbjct: 342 MGPAADELKRQQSMVEQVLKTEEEQFARTLERGLALLDDELSKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFPLDLT  +  ER L VD  GF  AM+E R R+R +            AD  +     
Sbjct: 402 YGFPLDLTADVCRERNLKVDEIGFERAMEEQRRRARESSG--------FGADYNS----- 448

Query: 529 GVLATDDSFKFIWFQDH---KSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + KF  + DH   +S + A++   + ++ +  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDGASKFSGY-DHNQQRSSVTALFRDGQAVDVLNAGEEGVVVLNETPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G +     SF V + Q YG  + H G + +G+    VG+ V   +D  RR  I  NH
Sbjct: 507 GDKGELTAQGVSFVVTDTQKYGQAIGHQGKVAQGS--VKVGDSVEAIIDEARRSRIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+L+ ALR+VLGDHV QKGS+V    LRFDFSH + + PE +R++E IVN Q++  L
Sbjct: 565 SATHLLHAALRQVLGDHVSQKGSLVSDRNLRFDFSHFEAMKPEQIRQVEDIVNAQVRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L +AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEDAKA-KGAMALFGEKYDESVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAY-------KAFEAACSLEKEVDD- 817
           GTH   T +   F + SE G A G+RRI AVT   A         A   A SL K     
Sbjct: 668 GTHARQTGDIGLFRITSEAGTAAGVRRIEAVTGEGAIAVMHQDADALREAASLVKSDAHS 727

Query: 818 -ASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            A KI   + +  Q+ K  +++ ++  Q A + A+ +++A    G    +S+++  ++A 
Sbjct: 728 VAEKIRAVMDKTRQLEKELQQLKDQ--QAAQESASLSSKAIDVKGVKLLVSQLD-NVEAK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  V+V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSGVVVLAT-TAEGKVSLVAGVTK--DLTDKVKAGELIGMVAQQVDG 841

Query: 937 RCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           + G G+  +A   G+DAA +  A+     + A KL
Sbjct: 842 KGG-GRPDMAMAGGSDAAALPQALAGVEAWVADKL 875


>gi|375357094|ref|YP_005109866.1| putative alanyl-tRNA synthetase [Bacteroides fragilis 638R]
 gi|301161775|emb|CBW21315.1| putative alanyl-tRNA synthetase [Bacteroides fragilis 638R]
          Length = 872

 Score =  591 bits (1524), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 329/747 (44%), Positives = 443/747 (59%), Gaps = 61/747 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A + RD+F  FFE K H    S+P+V  +DPTL+F NAGMNQ+K I LG        +K 
Sbjct: 4   AKETRDSFKNFFESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGN-----HPAKY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWE L  V 
Sbjct: 59  HRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAWEYLVDVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +L  + LYAT F G  + GL  DNEA   W ++LP   ++     DNFWEMGDTGPCGPC
Sbjct: 119 KLNPEHLYATVFEGSPEEGLERDNEAASYWEQYLPKDHIINGNKHDNFWEMGDTGPCGPC 178

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + A      LVN+D P  IEIWN+VF+Q+NR++D +L+PLPAK +DTG+
Sbjct: 179 SEIHIDLRPAEERAKISGRDLVNHDHPQVIEIWNLVFMQYNRKADSTLEPLPAKVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF P+  AI Q  G      + G ++ +  D+A RV+ADHI
Sbjct: 239 GFERLCMALQGKTSNYDTDVFQPLIKAIAQMAGT-----EYGKNEQN--DIAMRVIADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++F+I DG  P N    YV+RRILRRAVRYG   L  +  F   L+ +++  MGD +P
Sbjct: 292 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLIDSMGDAYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ--GKV-LSGQDAFILWDTYGF 471
           EL  ++  I ++I  EE SF +TL  GI    K   D +  GK  +SG+DAF L+DT+GF
Sbjct: 352 ELIAQKELIEKVIKEEEESFLRTLETGIRLLDKTMADTKANGKTEISGKDAFTLYDTFGF 411

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E G+ V++E F+  M + ++R+R+A   + G  I++    T  +   G  
Sbjct: 412 PLDLTELILRENGMTVNVEEFDVEMQQQKQRARNAAAIETGDWIILKEGTTEFV---GYD 468

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            T+     + ++  K   + +Y                IVL  + FYAE GGQ+ D G +
Sbjct: 469 YTEYETSILRYRQVKQKNQTLYQ---------------IVLDYTPFYAESGGQVGDTGVL 513

Query: 592 EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHML 651
              F +  V + +      IHI   T+          + C VD D+R   A NH+ TH+L
Sbjct: 514 VNEFETIEVIDTKKENNLPIHI---TKKLPEHPEAPMMAC-VDTDKRAACAANHSATHLL 569

Query: 652 NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS-K 710
           + ALREVLG+HV+QKGS+V P+ LRFDFSH + V  E LR++E +VN +I+A + +   +
Sbjct: 570 DEALREVLGEHVEQKGSLVTPDSLRFDFSHFQKVTDEELRKVEHLVNAKIRANVPLQEHR 629

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
              + EAK + G  A+FGE Y D VRV+  G                  S E CGGTH++
Sbjct: 630 NIPIEEAKEL-GAIALFGEKYGDHVRVIQFGS-----------------SIEFCGGTHVA 671

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVT 797
            T       ++SE  +A G+RRI A T
Sbjct: 672 ATGNIGMVKIISESSVAAGVRRIEAYT 698


>gi|27262306|gb|AAN87434.1| Alanyl-tRNA synthetase [Heliobacillus mobilis]
          Length = 883

 Score =  591 bits (1524), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 339/753 (45%), Positives = 460/753 (61%), Gaps = 59/753 (7%)

Query: 56  VEWPATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQ 115
           +++   +VR  F ++FE K H    SS +VP NDPTLLF NAGMNQ+K +FLG      +
Sbjct: 1   MQFTGNRVRQLFLEYFEQKGHTVVASSSLVPHNDPTLLFTNAGMNQFKDLFLGY-----E 55

Query: 116 LSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELL 175
                RA  +QKC+RAGGKHNDLD VG+   HHTFFEMLGN+SFGDYFK +AI +AWE L
Sbjct: 56  KRPYVRATTSQKCVRAGGKHNDLDTVGRTARHHTFFEMLGNFSFGDYFKKDAIRFAWEFL 115

Query: 176 TKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFGCKDNFWEMGDT 233
           T V +LP D+LYAT +  DE        EA ++W K +  P  R++  G KDNFW MGDT
Sbjct: 116 TDVVKLPKDKLYATIYLDDE--------EAHELWKKEIGVPEERIIRLGEKDNFWSMGDT 167

Query: 234 GPCGPCSEIHYDRTGN----RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKH 289
           GPCGPCSEI  DR  +     +  ++   D    +EIWN+VF+QFNR+  G + PLP   
Sbjct: 168 GPCGPCSEILIDRGEHLRCGAEECAIGKCDCDRWLEIWNLVFMQFNRDEQGVMTPLPKPS 227

Query: 290 VDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRV 349
           +DTG+G ER+TS+LQ+  SNYDTD+  P+   ++Q +G   +         D     +RV
Sbjct: 228 IDTGMGLERITSVLQDVPSNYDTDLLRPLITYVEQLSGKEYHR--------DDRGFPFRV 279

Query: 350 VADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVM 409
           +ADHIR+ +F I DG  PGNEGR YVLRRILRRAVR+G +V+  +  F   +V +VV++M
Sbjct: 280 IADHIRSCTFLITDGVLPGNEGRGYVLRRILRRAVRFG-KVIGIEKPFMYQIVPVVVELM 338

Query: 410 GDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ---GKVLSGQDAFILW 466
           G+ +PE+K+++  ++++I  EE  F +TL +G+         V+   G VL G+ AF L+
Sbjct: 339 GEAYPEIKEKQDFVQKVIKIEEERFHETLHEGMRIAADIVAKVKEDGGGVLPGRQAFTLY 398

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA-IVMDADATAAL 525
           DTYGFPLDL + +AEE GL VD +GF  AM+  RER+R+A+   + GA + + AD    L
Sbjct: 399 DTYGFPLDLAEDIAEENGLTVDKDGFAAAMEAQRERARAARQDTSYGAGMEIWAD---LL 455

Query: 526 HKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
           +K G  A    F        +S + AI +G E +     G  V +VLA + FYAE GGQI
Sbjct: 456 NKLGPTA----FTGYGQLSGQSQLLAIVSGPEQVAEASVGTAVQVVLAETPFYAESGGQI 511

Query: 586 FDEGFIEGLFGSFYVRNV-QIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
            D G+I        + +  ++ GG  +H+G + EG   F  GE V  +V   RR+ IA +
Sbjct: 512 GDTGYIRTDKAIIRIDDTKKMAGGLFVHVGVVEEGT--FQAGETVTAEVTGLRRQAIARH 569

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ AL++VLG+HV+Q GS+V  ++LRFDFSH  P+  E  ++IE  VN Q+   
Sbjct: 570 HSATHLLHRALKDVLGEHVNQAGSLVTGDRLRFDFSHFTPLTREEWKQIEESVNRQVFRS 629

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
           L V   EATL EAK + G  A+FGE Y D VRVV +G                  S ELC
Sbjct: 630 LPVEVFEATLDEAKAM-GATALFGEKYGDHVRVVRMG----------------DYSMELC 672

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVT 797
           GGTHL NT +   F L+SE GI  G+RR+ AVT
Sbjct: 673 GGTHLQNTAQIGLFKLVSEGGIGAGLRRLEAVT 705


>gi|398902627|ref|ZP_10651166.1| alanine--tRNA ligase [Pseudomonas sp. GM50]
 gi|398178259|gb|EJM65912.1| alanine--tRNA ligase [Pseudomonas sp. GM50]
          Length = 873

 Score =  591 bits (1524), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 357/893 (39%), Positives = 508/893 (56%), Gaps = 90/893 (10%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F +FFE++ H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLRFFEEQGHTRVASSSLIPGNDPTLLFTNAGMNQFKDCFLGQ-----EKRAY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           TRA ++QKC+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AW  LT  K
Sbjct: 58  TRAVSSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAITYAWNFLTSEK 117

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFW 228
              LP ++L+ T +        A D+EA DIW K +  PA R++  G         DNFW
Sbjct: 118 WLNLPKEKLWVTVY--------ASDDEAYDIWTKDIGVPAERMVRIGDNKGAPYASDNFW 169

Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
            MGDTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG L PLP
Sbjct: 170 TMGDTGPCGPCTEIFYDHGADIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLP 229

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
           A  VDTG+G ER++++LQ+  SNY+ D+F  +  A  +A G             +    +
Sbjct: 230 APSVDTGMGLERISAVLQHVHSNYEIDLFQSLLIASAKAIGC-----------TNDAQAS 278

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            +VVADHIR+  F IADG  P NEGR YVLRRI+RRA R+G++ L A+  FF  +V  +V
Sbjct: 279 LKVVADHIRSCGFLIADGVLPSNEGRGYVLRRIIRRACRHGNK-LGAKGSFFYQIVAALV 337

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
             MG+ FPELK ++AHI  ++ AEE  F KTL +G++  ++   +++G V+ G   F L+
Sbjct: 338 AEMGEAFPELKSQQAHIERVLKAEEEQFAKTLEQGLKILEQDLAELKGDVVPGDVVFKLY 397

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFP+DLT  +A ER L +D EGF   M+  R R+RSA       +  MD ++     
Sbjct: 398 DTYGFPMDLTGDIARERSLTIDEEGFEREMEAQRVRARSAS------SFGMDYNS----- 446

Query: 527 KRGVLATDDSFKFIWFQDHKSVIK--AIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
              ++  D + +F  +  H    K  A+Y   + ++++  G E  +VL  + FYAE GGQ
Sbjct: 447 ---LVKVDVATEFTGYTAHSGSAKIVALYKDGQSVDALSEGEEGVVVLNQTPFYAESGGQ 503

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           I D GF++     F VR+    GG  +H G L  G+    VG  V   VD D R   + N
Sbjct: 504 IGDCGFLQAGAARFDVRDTTKTGGAFLHHGVLDSGS--LIVGAPVETHVDADVRHATSLN 561

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ ALR+VLG+HV QKGS+V  ++LRFDFSH + + PE L+ +E IVN +I+  
Sbjct: 562 HSATHLLHAALRQVLGEHVQQKGSLVDSQRLRFDFSHFEAIKPEQLKALEDIVNAEIRKN 621

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
            +V ++E  +  AK   G  A+FGE Y D VRV+++G                  S ELC
Sbjct: 622 SEVETEETDIETAKQ-KGAMALFGEKYGDSVRVLSMG----------------DFSVELC 664

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVT--TGLAY------KAFEAACSLEKEVD 816
           GG H + T +     ++SE G+A G+RRI A+T    LAY      +  EAA  ++   D
Sbjct: 665 GGIHATRTGDIGLLKIISEGGVASGVRRIEALTGAAALAYLNTAEEQLKEAANLVKGSRD 724

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQ-KAVKVATETAEAAASNGKPFCISRVEV-GLD 874
           +      ++LE+N++ + Q     E LQ KA   A +   A+A + K   +  V + G D
Sbjct: 725 NLIDKLSAVLERNRLLEKQL----EQLQAKAASAAGDDLSASALDVKGVKVLAVRLDGQD 780

Query: 875 AAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWL 927
             A+   V ++  + G  V++  +     K V+ AGV +  D + QL+  + +
Sbjct: 781 GKALLALVDQLKNKLGRAVILLGSLH-EEKVVLVAGVTK--DLTGQLKAGDLM 830


>gi|228470921|ref|ZP_04055766.1| alanyl-tRNA synthetase [Porphyromonas uenonis 60-3]
 gi|228307318|gb|EEK16332.1| alanyl-tRNA synthetase [Porphyromonas uenonis 60-3]
          Length = 872

 Score =  591 bits (1524), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 331/765 (43%), Positives = 454/765 (59%), Gaps = 62/765 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A  +R  F  FFE+  H    S+P+V  +DPTL+F NAGMNQ+K I LG  +P  +    
Sbjct: 4   AHDIRQAFLDFFEEHGHRIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNKEPQYR---- 59

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            RA ++QKC+R  GKHNDL++VG+DTYHHT FEMLGNWSFGDYFK EAIE+AW  LT+  
Sbjct: 60  -RAADSQKCLRVSGKHNDLEEVGRDTYHHTMFEMLGNWSFGDYFKKEAIEFAWTFLTERL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
            LP DRLY T FGG  + GL+ D+EA   WL+     R++    KDNFWEMGDTGPCGPC
Sbjct: 119 HLPKDRLYVTVFGGSAEEGLSRDDEAAGYWLQHTTEDRIIDGSRKDNFWEMGDTGPCGPC 178

Query: 240 SEIHYDRTGNRD-----AASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     +        LVN D P  IEIWN+VF+Q++R++DG L+PLP K +DTG+
Sbjct: 179 SEIHIDLRSEEERQEICGRDLVNKDHPLVIEIWNLVFMQYDRKADGHLEPLPHKVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   +Q K SNYDTD+F P+  AI+  +G      + G +  ++VD+A RVVADHI
Sbjct: 239 GFERLCMAMQGKKSNYDTDLFTPLIRAIETLSGE-----QYGQN--EQVDIAMRVVADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++FAIADG  P N    YV+RRILRRAVRY    L A +     L+  + +VMG  +P
Sbjct: 292 RTIAFAIADGQLPSNAKAGYVIRRILRRAVRYAYTFLHADEPMLYTLLPTLNEVMGGAYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV--QGKVLSGQDAFILWDTYGFP 472
           E+  +   I  +I  EE SF +TL +G++  +   Q++    KVLSG DAF+L+DTYGFP
Sbjct: 352 EIVAQRELIASVIKEEEESFLRTLAQGLKLLESKIQELPQDAKVLSGADAFVLYDTYGFP 411

Query: 473 LDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLA 532
           LDLT+L+  ERG+ +D   F+  M E + R+R A    A    V+D + +         +
Sbjct: 412 LDLTELILSERGMTLDQVAFDKLMQEQKSRARQAAAVDAADWEVLDEETSE--------S 463

Query: 533 TDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIE 592
           T   ++ +  + H    + +             +   +VLA + FYAE GGQ+ D+G + 
Sbjct: 464 TFVGYETLQIETHILRYRKVADKKH--------SYYQVVLAETPFYAEMGGQVGDKGVLI 515

Query: 593 GLFGSFY-VRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHML 651
              G+ Y + + +      +HI S      +    + +I +V  + R L   NHT TH++
Sbjct: 516 AQDGTEYPILDTKRENNLTVHILSTLPADPK----QPLIARVGAELRHLTEANHTATHLM 571

Query: 652 NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDV-FSK 710
           + ALR VLG HV+QKGS+V  + LRFDFSH K V PE +  +E +VN +I+A+      +
Sbjct: 572 HHALRAVLGTHVEQKGSLVSADLLRFDFSHFKKVTPEEIAEVERLVNAEIRADRPRDEHR 631

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
              +A+AK + G  A+FGE Y D VRV+  G                  S ELCGGTH++
Sbjct: 632 NVPIAQAKEM-GAMALFGEKYGDEVRVIKYGD-----------------SVELCGGTHVA 673

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV 815
           +T +   F ++SE  IA GIRRI AVT     KA E    LE+++
Sbjct: 674 STGQIGFFKIISEGSIAAGIRRIEAVT---GPKAEEYVHHLEEQL 715


>gi|376316015|emb|CCF99418.1| alanyl-tRNA synthetase [uncultured Flavobacteriia bacterium]
          Length = 871

 Score =  591 bits (1523), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 349/885 (39%), Positives = 494/885 (55%), Gaps = 83/885 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R  F  FF++K+H    SSP+V  +DPTL+F NAGM  +K  FLG + P     K 
Sbjct: 3   SQEIRSQFLDFFKEKSHQIVPSSPMVLKDDPTLMFTNAGMAPFKEYFLGNSIP-----KN 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  +TQKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWELLT+VY
Sbjct: 58  ARISDTQKCLRVSGKHNDLEEVGYDTYHHTMFEMLGNWSFGDYFKKEAISWAWELLTEVY 117

Query: 180 RLPADRLYATYF-GGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGP 238
            +  D LY T F G  +   L  D EA DIW + +P  R+L    KDNFWEMG+ GPCGP
Sbjct: 118 GISQDILYVTIFEGSTDNDNLPIDQEAYDIWKEIIPEDRILRGNKKDNFWEMGEQGPCGP 177

Query: 239 CSEIHYD-RTGNR----DAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTG 293
           CSEIH D RT       D  SLVN D P  +EIWN+VF+Q+NR++ G L+ LP+KH+DTG
Sbjct: 178 CSEIHVDIRTDQEKARVDGKSLVNMDHPQVVEIWNLVFMQYNRKATGELEELPSKHIDTG 237

Query: 294 LGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADH 353
           LGFERL  +LQ+  SNYDTD+F+P+   I+  +        V   + +K D+A RV+ DH
Sbjct: 238 LGFERLCMVLQDVKSNYDTDIFIPLIREIEAISS-------VTYGENEKEDIAIRVIVDH 290

Query: 354 IRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVF 413
           +R ++F+IADG  P N G  YV+RRILRRAVRYG   L  ++ F   LV+I+ K MG  F
Sbjct: 291 VRAVAFSIADGQLPSNTGAGYVIRRILRRAVRYGFTFLHKKEPFIYRLVDILSKKMGKAF 350

Query: 414 PELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPL 473
           PEL  ++  I  +I  EE SF +TL +G+            K +SG+ AF L+DT+GFP+
Sbjct: 351 PELNTQKQLIENVIKEEETSFLRTLDQGLVLLDTIINTADSKEVSGKKAFELYDTFGFPI 410

Query: 474 DLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLAT 533
           DLT L+  E+G +++ + F+  M + +ERSRSA             D T        L  
Sbjct: 411 DLTSLILREKGFVLNEDDFHVEMKKQKERSRSASKSSTD-------DWTD-------LIN 456

Query: 534 DDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEG 593
           +    F+ +   ++ +K   T    + S   G++  +V   + FY E GGQ+ D+G++E 
Sbjct: 457 NTEEGFVGYNSLEADVKI--TRYRKVSSKKEGDQYQLVFNHTPFYPEGGGQVGDKGYLED 514

Query: 594 LFGS-FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLN 652
             G   YV N +     +IH    T+   + +V E     VD  +R+  + NH+ TH+L+
Sbjct: 515 SHGDVLYVLNTKKENNVIIH---FTKNLPK-NVREPFTAVVDQKQRQRTSANHSATHLLH 570

Query: 653 FALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEA 712
            ALREVLG HV QKGS V  + LRFDFSH   +  + LR +E+ VN +I+ +L +  K A
Sbjct: 571 QALREVLGTHVAQKGSAVHSKHLRFDFSHFSKLTVDELRDVENFVNARIEGKLPLIEKRA 630

Query: 713 TLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNT 772
              E    +G  ++FGE Y D VR +  G+                 S ELCGGTH++NT
Sbjct: 631 IPKEEAIADGAMSLFGEKYGDTVRSIRFGQ-----------------SVELCGGTHVTNT 673

Query: 773 REAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDD-------------AS 819
            +   F + SE  +A GIRRI A+T     + +    S+  E+ +             A 
Sbjct: 674 SDIWHFKIKSEGAVAAGIRRIEAITMDATKEYYLENNSVFHELKELLNNPKEPVKALLAI 733

Query: 820 KIEGSLLEK--NQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAA 877
           + E + L+K  +Q+ KA+ K    NL+  ++      E    NG  F   +V+  LDA  
Sbjct: 734 QHENNTLKKQLDQLLKAKTK----NLKSELR-----NELQEINGVQFLAKKVD--LDANG 782

Query: 878 VREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLE 922
           ++    ++  +     ++F   E   KA++   V ++    K L+
Sbjct: 783 IKTLAFELGNEFKNLFLLFGA-ENNGKAILTCYVSKEIVADKNLD 826


>gi|449146553|ref|ZP_21777326.1| alanyl-tRNA synthetase [Vibrio mimicus CAIM 602]
 gi|449077785|gb|EMB48746.1| alanyl-tRNA synthetase [Vibrio mimicus CAIM 602]
          Length = 860

 Score =  591 bits (1523), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 363/918 (39%), Positives = 513/918 (55%), Gaps = 92/918 (10%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR  F  FFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI++AWE LT V +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTGVLQL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           P +RL  T +          D+EA DIW K   +PA R++  G K        DNFW+MG
Sbjct: 122 PKERLLVTVY--------ETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKH 289
           DTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG+++PLP   
Sbjct: 174 DTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPS 233

Query: 290 VDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRV 349
           VDTG+G ER+++I+Q   SNY+ DVF  +  A   A G +  +           + + RV
Sbjct: 234 VDTGMGIERISAIMQGVHSNYEIDVFQTLIKAAADAIGYQYLT-----------NQSLRV 282

Query: 350 VADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVM 409
           VADHIR+ +F I DG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF+ LV  + +VM
Sbjct: 283 VADHIRSCAFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGAFFHKLVGPLAEVM 341

Query: 410 GDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTY 469
           G    ELK+++A + +++  EE +FG+TL +G+    +A   + G++L G+  F L+DTY
Sbjct: 342 GTAGVELKKQQALVEKVLRIEEENFGRTLDRGMSILNEALDQLSGQMLDGETVFKLYDTY 401

Query: 470 GFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRG 529
           GFP DLT  +A ERG  +D  GF  AM+E R+R+R A      G    D ++        
Sbjct: 402 GFPADLTNDVARERGFSIDETGFEQAMEEQRQRAREA------GQFGTDYNSLIK----- 450

Query: 530 VLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEG 589
             AT+  F        +SV++ I+     + ++  G++  IVL ++ FYAE GGQ  D G
Sbjct: 451 -SATNTEFCGYTASRGQSVVREIFVEGAEVSALSAGDKAIIVLDNTPFYAESGGQCGDTG 509

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
            ++   G F+V +    G  + H G L +G    + G++V   VD  RR  I+ NH+ TH
Sbjct: 510 VLKTEAGVFHVEDTHKLGNAIAHHGVLAQGV--LAKGDQVDAIVDEQRRAAISLNHSATH 567

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +L+ ALR+VLG+HV QKGS+V  E LRFDFSH + +    ++ +E +VN++I+    + +
Sbjct: 568 LLHAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTAAEIKEVERLVNQEIRRNHSIET 627

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
               + EAK   G  A+FGE Y D VRV+++G                + S ELCGG H 
Sbjct: 628 NIMNIDEAKA-KGAMALFGEKYDDQVRVLSMG----------------NFSTELCGGIHA 670

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKN 829
           SNT +   F + SE GIA GIRRI AVT   A    EA    ++   DA  +E +     
Sbjct: 671 SNTGDIGLFKITSEGGIAAGIRRIEAVTGEGALDYIEA----QQAQHDAKVVEMA----- 721

Query: 830 QVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEV------GLDAAAVREAVL 883
               A+ K+ E+ +Q+ +K      E+A    +   IS V V      G D  A+R  V 
Sbjct: 722 ----AKAKLLEKEIQQ-LKDKLAAKESAGLINQVKQISGVNVLVAELNGADNKALRGMVD 776

Query: 884 KVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKG 943
            +  Q G  +++   +    K  + AGV   SD + +++  E +      + G+ G G+ 
Sbjct: 777 DLKNQLGSGIIMLG-NVAEGKVGLIAGVT--SDLTNKVKAGELVNMVALQVGGK-GGGRP 832

Query: 944 GLASGQGTDAAQVTPAMD 961
            +A   GTDA  +  A++
Sbjct: 833 DMAQAGGTDAHALPSALE 850


>gi|317493956|ref|ZP_07952373.1| alanyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316918283|gb|EFV39625.1| alanyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 875

 Score =  591 bits (1523), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 359/935 (38%), Positives = 523/935 (55%), Gaps = 91/935 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  F+  K H   +SS +VP NDPTLLF NAGMNQ+K +FLG    +      +R
Sbjct: 7   EIRQAFLDFYHSKGHQIVESSSLVPNNDPTLLFTNAGMNQFKDVFLGIDKRS-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT    +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP ++L+ T +          D+EA +IW     +P  R++  G         DNFW+M
Sbjct: 122 NLPKEKLWVTVY--------ETDDEAFNIWADEVGVPRERIIRIGDNKGAPFASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR+SDG++ PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSAEEDGDRYIEIWNIVFMQFNRQSDGTMLPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  +  A  + TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIAATAKVTGATDLSSK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F ++DG  P NEGR YVLRRI+RRAVR+G+ ++ A++ FF  LV  +++V
Sbjct: 283 VIADHIRSCAFLVSDGVLPSNEGRGYVLRRIIRRAVRHGN-MVGAKETFFYKLVAPLIEV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    ELK++++ + +++  EE  F +TL +G+         + G  L G+ AF L+DT
Sbjct: 342 MGPAADELKRQQSMVEQVLKTEEEQFARTLERGLALLDDELSKLSGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFPLDLT  +  ER L VD  GF  AM+E R R+R +            AD  +     
Sbjct: 402 YGFPLDLTADVCRERNLKVDEIGFERAMEEQRRRARESSG--------FGADYNS----- 448

Query: 529 GVLATDDSFKFIWF---QDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            ++  D + KF  +   Q H SV  A++   + ++ +  G E  +VL  + FYAE GGQ+
Sbjct: 449 -MIRVDGASKFSGYDHNQQHSSVT-ALFRDGQAVDVLNAGEEGVVVLNETPFYAESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G +     SF V + Q YG  + H G + +G+    VG+ V   +D  RR  I  NH
Sbjct: 507 GDKGELTAQGVSFVVTDTQKYGQAIGHQGKVAQGS--VKVGDSVEATIDEARRSRIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+L+ ALR+VLGDHV QKGS+V    LRFDFSH + + PE +R++E IVN QI+  L
Sbjct: 565 SATHLLHAALRQVLGDHVSQKGSLVSDRNLRFDFSHFEAMKPEQIRQVEDIVNAQIRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    L +AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 625 PIETNIMDLEDAKA-KGAMALFGEKYDESVRVLSMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAF--------EAACSLEKEVDD 817
           GTH   T +   F + SE G A G+RRI AVT   A            EAA  ++ +   
Sbjct: 668 GTHARQTGDIGLFRITSEAGTAAGVRRIEAVTGEGAIAVMHQDADALREAASLVKSDAHS 727

Query: 818 -ASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            A KI   + +  Q+ K  +++ ++  Q A + A+ +++A    G    +S+++  ++A 
Sbjct: 728 VAEKIRAVMDKTRQLEKELQQLKDQ--QAAQESASLSSKAVDVKGVKLLVSQLD-NVEAK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  V+V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSGVVVLAT-TAEGKVSLVAGVTK--DLTDKVKAGELIGMVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           + G G+  +A   G+DA  +  A+     + A KL
Sbjct: 842 KGG-GRPDMAMAGGSDATALPQALAGVEAWVADKL 875


>gi|423121786|ref|ZP_17109470.1| alanyl-tRNA synthetase [Klebsiella oxytoca 10-5246]
 gi|376393399|gb|EHT06056.1| alanyl-tRNA synthetase [Klebsiella oxytoca 10-5246]
          Length = 875

 Score =  591 bits (1523), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 357/912 (39%), Positives = 511/912 (56%), Gaps = 83/912 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    +      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRH-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI++AWELLT    +
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIKYAWELLTGENWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP D+L+ T +          D+EA DIW     +P  R++  G         DNFW+M
Sbjct: 122 ALPKDKLWVTVY--------ETDDEAFDIWANEVGVPRERIIRIGDNKGAAFASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI +D   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFFDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  + + + + TGA            D  + + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIENVARVTGA-----------TDLTNKSLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVIPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFWKLVAPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    ELKQ++A +  ++  EE  F +TL +G+    +    ++G  L G+ AF L+DT
Sbjct: 342 MGAAGEELKQQQAQVEHVLKTEEEQFARTLERGLALLDEELSKLKGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R +            AD  A +   
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSG--------FGADYNAMIRVD 453

Query: 529 GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDE 588
           G       FK     +  + + A++   + +++V  G E  ++L  + FYAE GGQ+ D+
Sbjct: 454 GA----SEFKGYDHLELNAKVTALFIDGKAVDAVTAGQEAVVILDQTPFYAESGGQVGDK 509

Query: 589 GFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
           G ++G   SF V + Q YG  + HIG L+ G     VG+ +   VD  RR+ I  NH+ T
Sbjct: 510 GELKGAGFSFAVSDTQKYGQAIGHIGKLSHGT--LKVGDALEADVDRARRQRIRLNHSAT 567

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R +E +VN QI+  L V 
Sbjct: 568 HLMHAALRQVLGTHVAQKGSLVNDKALRFDFSHFEAMKPEEIRAVEDLVNAQIRRNLPVE 627

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
           +    +  A+  +G  A+FGE Y D VRV+++G                  S ELCGGTH
Sbjct: 628 TNIMDIDAARE-SGAMALFGEKYDDRVRVLSMG----------------DFSTELCGGTH 670

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEK 828
            S T +   F + SE G A G+RRI AVT   A     A   L  ++    K +   L  
Sbjct: 671 ASRTGDIGLFRITSESGTAAGVRRIEAVTGEGAIAYLHAQSDLLGDIAQLLKGDSHNL-G 729

Query: 829 NQVRKA--QKKVAEENLQK------AVKVATETAEAAASNGKPFCISRVEVGLDAAAVRE 880
           ++VR A  + +V E+ LQ+      A + A  +++A   NG    +S +  G++   +R 
Sbjct: 730 DKVRAALERTRVLEKELQQLKEQAAAQESANLSSKAEEINGVKLLVSEL-AGVEPKMLRT 788

Query: 881 AVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGK 940
            V  +  Q G  V+V +T     K  + AGV +  D + +++  E +    Q + G+ G 
Sbjct: 789 MVDDLKNQLGSTVVVLAT-VADGKVSLIAGVSK--DVTDRVKAGELVGMVAQQVGGKGG- 844

Query: 941 GKGGLASGQGTD 952
           G+  +A   GTD
Sbjct: 845 GRPDMAQAGGTD 856


>gi|336408274|ref|ZP_08588768.1| alanyl-tRNA synthetase [Bacteroides sp. 2_1_56FAA]
 gi|335939574|gb|EGN01448.1| alanyl-tRNA synthetase [Bacteroides sp. 2_1_56FAA]
          Length = 872

 Score =  591 bits (1523), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 328/747 (43%), Positives = 443/747 (59%), Gaps = 61/747 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A + RD+F  FFE K H    S+P+V  +DPTL+F NAGMNQ+K I LG        +K 
Sbjct: 4   AKETRDSFKNFFESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGN-----HPAKY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWE L  V 
Sbjct: 59  HRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAWEYLVDVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +L  + LYAT F G+ + GL  DNEA   W ++LP   ++     DNFWEMGDTGPCGPC
Sbjct: 119 KLNPEHLYATVFEGNPEEGLERDNEAASYWEQYLPKDHIINGNKHDNFWEMGDTGPCGPC 178

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + A      LVN+D P  IEIWN+VF+Q+NR++D +L+PLPAK +DTG+
Sbjct: 179 SEIHIDLRPAEERAKISGRDLVNHDHPQVIEIWNLVFMQYNRKADSTLEPLPAKVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF P+  AI Q  G      + G ++ +  D+A RV+ADHI
Sbjct: 239 GFERLCMALQGKTSNYDTDVFQPLIKAIAQMAGT-----EYGKNEQN--DIAMRVIADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT+ F+I DG  P N    YV+RRILRRAVRYG   L  +  F   L+ +++  MGD +P
Sbjct: 292 RTIVFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLIDSMGDAYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ--GKV-LSGQDAFILWDTYGF 471
           EL  ++  I ++I  EE SF +TL  GI    K   D +  GK  +SG+DAF L+DT+GF
Sbjct: 352 ELIAQKELIEKVIKEEEESFLRTLETGIRLLDKTMADTKANGKTEISGKDAFTLYDTFGF 411

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E G+ V++E F+  M + ++R+R+A   + G  I++    T  +   G  
Sbjct: 412 PLDLTELILRENGMTVNVEEFDAEMQQQKQRARNAAAIETGDWIILKEGTTEFV---GYD 468

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            T+     + ++  K   + +Y                IVL  + FYAE GGQ+ D G +
Sbjct: 469 YTEYETSILRYRQVKQKNQTLYQ---------------IVLDYTPFYAESGGQVGDTGVL 513

Query: 592 EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHML 651
              F +  + + +      IHI   T+          + C VD D+R   A NH+ TH+L
Sbjct: 514 VNEFETIEIIDTKKENNLPIHI---TKKLPEHPEAPMMAC-VDTDKRAACAANHSATHLL 569

Query: 652 NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS-K 710
           + ALREVLG+HV+QKGS+V P+ LRFDFSH + V  E LR++E +VN +I+A + +   +
Sbjct: 570 DEALREVLGEHVEQKGSLVTPDSLRFDFSHFQKVTDEELRKVEHLVNAKIRANVPLQEHR 629

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
              + EAK + G  A+FGE Y D VRV+  G                  S E CGGTH++
Sbjct: 630 NIPIEEAKEL-GAIALFGEKYGDHVRVIQFGS-----------------SIEFCGGTHVA 671

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVT 797
            T       ++SE  +A G+RRI A T
Sbjct: 672 ATGNIGMVKIISESSVAAGVRRIEAYT 698


>gi|153807409|ref|ZP_01960077.1| hypothetical protein BACCAC_01688 [Bacteroides caccae ATCC 43185]
 gi|149129771|gb|EDM20983.1| alanine--tRNA ligase [Bacteroides caccae ATCC 43185]
          Length = 872

 Score =  591 bits (1523), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 327/747 (43%), Positives = 446/747 (59%), Gaps = 61/747 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++RD+F  FFE K H    S+P+V  +DPTL+F NAGMNQ+K I LG        +K 
Sbjct: 4   AKEIRDSFKNFFESKGHHIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGN-----HPAKY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWE L +V 
Sbjct: 59  QRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAINWAWEYLVEVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +L  + LYAT F G  + GL+ D+EA   W +FLP   ++     DNFWEMGDTGPCGPC
Sbjct: 119 KLNPEHLYATVFEGSPEEGLSRDDEAASYWEQFLPKDHIINGNKHDNFWEMGDTGPCGPC 178

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + A      LVN+D P  IEIWN+VF+Q+NR++D SL+PLPAK +DTG+
Sbjct: 179 SEIHIDLRPAEERAKISGRDLVNHDHPQVIEIWNLVFMQYNRKADSSLEPLPAKVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF P+  AI   +G      + G D   + D+A RV+ADHI
Sbjct: 239 GFERLCMALQGKTSNYDTDVFQPMLKAIAVMSGT-----EYGKD--KQQDIAMRVIADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++F+I DG  P N    YV+RRILRRAVRYG   L  +  F   L+ +++  MGD +P
Sbjct: 292 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLIDNMGDAYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ--GKV-LSGQDAFILWDTYGF 471
           EL  ++  I ++I  EE +F +TL  GI    K  +D +  GK+ +SG+DAF L+DT+GF
Sbjct: 352 ELIAQKTLIEKVIKEEEEAFLRTLETGIRLLDKTMEDTKAAGKIEISGKDAFTLYDTFGF 411

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E G+ V++E FN  M + ++R+R+A   + G  I +    T  +   G  
Sbjct: 412 PLDLTELILRENGMTVNLEEFNAEMQQQKQRARNAAAIETGDWITLKEGTTEFV---GYD 468

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            T+     + ++  K   + +Y                IVL  + FYAE GGQ+ D G +
Sbjct: 469 YTEYEASILRYRQIKQKNQTLYQ---------------IVLDYTPFYAESGGQVGDTGVL 513

Query: 592 EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHML 651
              F +  V + +      IHI   T+          + C V+ D+R   A NH+ TH+L
Sbjct: 514 VSEFETIEVIDTKKENNLPIHI---TKKLPEHPEAPFMAC-VNTDKRAACAANHSATHLL 569

Query: 652 NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS-K 710
           + ALREVLG+H++QKGS+V P+ LRFDFSH + V  E +R++E IVN +I+A + +   +
Sbjct: 570 DAALREVLGEHIEQKGSLVTPDSLRFDFSHFQKVTDEEIRQVEHIVNARIRANIPLKEYR 629

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
              + EAK +  + A+FGE Y D VRV+  G                  S E CGGTH++
Sbjct: 630 NIPIEEAKELGAI-ALFGEKYGDRVRVIQFGS-----------------SIEFCGGTHVA 671

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVT 797
            T       ++SE  +A G+RRI A T
Sbjct: 672 ATGNIGMVKIVSESSVAAGVRRIEAYT 698


>gi|410618271|ref|ZP_11329222.1| alanyl-tRNA synthetase [Glaciecola polaris LMG 21857]
 gi|410162193|dbj|GAC33360.1| alanyl-tRNA synthetase [Glaciecola polaris LMG 21857]
          Length = 865

 Score =  591 bits (1523), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 351/919 (38%), Positives = 515/919 (56%), Gaps = 91/919 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF DK H    SS +VP +DPTLLF NAGMNQ+K +FLGT     +  K TR
Sbjct: 7   QIRQAFLDFFADKGHQKVSSSSLVPGDDPTLLFTNAGMNQFKDVFLGT-----EQRKYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A ++Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI +AW  LT+  +L
Sbjct: 62  AVSSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHQAIGYAWSFLTEELKL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           P D+L  T +        + D+EA DIW K   LP  +++     DNFW MGDTGPCGPC
Sbjct: 122 PKDKLLVTVY--------SEDDEAFDIWHKDIGLPKDKIIRIATSDNFWSMGDTGPCGPC 173

Query: 240 SEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFE 297
           SE+ YD   +           D    IEIWN+VF+QFNR+++G ++PLP   +DTG+G E
Sbjct: 174 SEVFYDHGEHIWGGPPGSPEEDGDRFIEIWNLVFMQFNRQANGDMQPLPKPSIDTGMGLE 233

Query: 298 RLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTL 357
           R+++ILQN  SNY+ D+F  +  A     G                D + RVVADHIR+ 
Sbjct: 234 RISAILQNVHSNYEIDIFQNLIKATADLVGTTSLD-----------DKSLRVVADHIRSC 282

Query: 358 SFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELK 417
           SF I DG  P NEGR YVLRRI+RRAVR+G++ L A   FF  LV  + + MGD +PEL 
Sbjct: 283 SFLITDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGANGVFFYKLVGALAQEMGDAYPELN 341

Query: 418 QREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQ 477
           ++ A I +++  EE  F +TL +G+        ++ GKV+ G   F L+DTYGFP DLT 
Sbjct: 342 EQRAIIEKVLRVEEEQFSRTLERGMLILNDTLAELDGKVVPGDVVFKLYDTYGFPADLTN 401

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSF 537
            +A E+GL +D EGF+ AM E R+R++ A           D D    L       +D   
Sbjct: 402 DVAREKGLSIDEEGFDQAMAEQRKRAQKASQ--------FDLDYNEQLR------SDLES 447

Query: 538 KFIWFQDHKSV--IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLF 595
            F+ ++  ++   ++ I+   E +  +  G++  ++L  S FYAE GGQ  D G +    
Sbjct: 448 VFVGYEQEQNTAQVREIFFQGESVNELASGDKGTLILDESPFYAESGGQAGDIGVLASET 507

Query: 596 GSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFAL 655
           G F V +    G  + H G  T      +VG++V  K+D  RR  I  NH+ TH+++ AL
Sbjct: 508 GDFTVTDTVKLGKAIAHKGIATS---TIAVGDKVEAKLDGKRRHAIKLNHSATHLMHAAL 564

Query: 656 REVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLA 715
           + +LG+HV+QKGS+V  E+LRFDFSH + ++ + +  +E++VNEQI A   + ++   L 
Sbjct: 565 KSILGEHVNQKGSLVQAERLRFDFSHFEAMNKQQIAAVETMVNEQILANHALQTQLMGLE 624

Query: 716 EAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREA 775
           +AK   G  A+FGE Y D VRVV++G                  S ELCGGTH++ T + 
Sbjct: 625 QAKEA-GAMALFGEKYDDDVRVVSMG----------------GFSMELCGGTHVARTGDI 667

Query: 776 EAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKNQVRKAQ 835
             F ++SE GIA G+RRI AVT         A   ++++  + S I G L  K  V    
Sbjct: 668 GLFKIISESGIASGVRRIEAVT------GLNALQHVQQQASELSSISGVL--KTDVSTVG 719

Query: 836 KKVAE-----ENLQKAV-KVATETAEAAASN--GKPFCISRVEV------GLDAAAVREA 881
            +V +     + L+K V ++  E A +A S+   +   I+ V+V      G+++ A+R  
Sbjct: 720 DRVTQLLEQTKILEKEVTRLKQEIASSAGSDLLSQINEINGVKVLSYHLQGIESGALRSI 779

Query: 882 VLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKG 941
           +  +  Q G  V++       +K  + AGV +  D +++++  E +    Q + G+ G G
Sbjct: 780 IDDLKNQIGSGVILLGV-ANNDKVSLIAGVTK--DLTQKVKAGELVNFVAQQVGGKGG-G 835

Query: 942 KGGLASGQGTDAAQVTPAM 960
           +  +A   G+    +  A+
Sbjct: 836 RPDMAQAGGSQPENLDSAI 854


>gi|78187794|ref|YP_375837.1| alanyl-tRNA synthetase [Chlorobium luteolum DSM 273]
 gi|123582508|sp|Q3B1I7.1|SYA_PELLD RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|78167696|gb|ABB24794.1| alanyl-tRNA synthetase [Chlorobium luteolum DSM 273]
          Length = 887

 Score =  591 bits (1523), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 348/757 (45%), Positives = 450/757 (59%), Gaps = 77/757 (10%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R +F  FF  K+H   +S+PV+P +DPTLLF NAGMNQ+K +FL            TR
Sbjct: 5   EIRQSFLDFFAAKSHTIVRSAPVIPADDPTLLFTNAGMNQFKDVFLAKG-----TRPYTR 59

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A +TQKCIRA GKHNDL+DVG+DTYHHTFFEMLGNWSFGDY+K EAI WAWELLT+V++L
Sbjct: 60  AADTQKCIRASGKHNDLEDVGRDTYHHTFFEMLGNWSFGDYYKEEAISWAWELLTEVWKL 119

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           PADRLYAT +          D+E+  IW +   +  S +L FG KDNFWEMG+TGPCGPC
Sbjct: 120 PADRLYATVY--------HDDDESARIWAEKTSIEPSHILRFGDKDNFWEMGETGPCGPC 171

Query: 240 SEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERL 299
           SEIH D T +     LVN  D   IE+WN+VFIQ++R+ DG L+PLP +HVDTG+GFER+
Sbjct: 172 SEIHIDLTPDGSGKELVNAGDHRAIELWNLVFIQYDRQPDGRLEPLPQRHVDTGMGFERV 231

Query: 300 TSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSF 359
            +++Q+K SNYDTDVF+P+F  + + TG        GA    + D+A RV+ADH RTL+F
Sbjct: 232 CAVMQSKASNYDTDVFLPLFQRLSELTGV-----TYGASMDGRQDIAMRVIADHARTLTF 286

Query: 360 AIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQR 419
           A++DG+ P NEGR YVLRRILRRA+RY S  L       + LV  +   MGDVF EL+ R
Sbjct: 287 ALSDGAMPSNEGRGYVLRRILRRALRY-SRDLGCSGPILHQLVGTLADSMGDVFGELRDR 345

Query: 420 EAHIREIIAAEEASFGKTLLKGIEKFKK---AAQDVQGKVLSGQDAFILWDTYGFPLDLT 476
              +  II AEE SF  TL +G+E F +   A     G++L G+DAF L+DTYGFP DLT
Sbjct: 346 RDAVERIIRAEEESFITTLDRGMEIFGELAAATARAGGRMLKGEDAFKLYDTYGFPFDLT 405

Query: 477 QLMAEERGLLVDIEGFNNAMDEARERSRS-AQNKQAGGAIVMDADATAALHKRGVLATDD 535
           +L+A E GL VD EGF + M E + R+RS  + KQ  G                    D 
Sbjct: 406 RLLATEAGLDVDGEGFEHCMQEQKSRARSDRREKQQTG--------------------DG 445

Query: 536 SFKFIWFQDHKSVIKAIY----TGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
           +  + WF D  +     Y      S  I +      + +VLA + FYAE GGQ  D G++
Sbjct: 446 AGSWQWFSDSHATTFLGYDRLAMPSTIIGAAHASGHLLLVLAETPFYAESGGQTGDRGWL 505

Query: 592 EGLFGSFYVRNVQIYGGFVIHIGSL-------TEGAGRFSVGEE---VICKVDYDRRKLI 641
           E       V + +  G   +H+ S        TE      V EE   V   V+   R+  
Sbjct: 506 ESAAYRMQVTDTRKDGDSFVHVVSRAFDKVRDTEIDPMDIVIEEATPVDASVERILRQET 565

Query: 642 APNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQI 701
             NHT TH+L+ ALR +LG HV QKGS V  E+LRFDFSH   + PE ++ +E+ VNE I
Sbjct: 566 ERNHTATHLLHAALRRILGSHVQQKGSFVTSERLRFDFSHFSKMTPEEIQAVEAEVNEHI 625

Query: 702 KAELDVFSKEATLAEAKCI-NGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSIS 760
           +    V SK A L   + I  G  A FG+ Y + VR+V +                  IS
Sbjct: 626 RCAAHV-SKHADLPYDEAIAKGALAFFGDKYAERVRMVEVP----------------GIS 668

Query: 761 AELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVT 797
           AELCGGTH+ N  +   F ++SE   A GIRRI A+T
Sbjct: 669 AELCGGTHVDNIGQIGIFKIISESSAAAGIRRIEALT 705


>gi|423693141|ref|ZP_17667661.1| alanine--tRNA ligase [Pseudomonas fluorescens SS101]
 gi|388001132|gb|EIK62461.1| alanine--tRNA ligase [Pseudomonas fluorescens SS101]
          Length = 872

 Score =  590 bits (1522), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 361/911 (39%), Positives = 511/911 (56%), Gaps = 82/911 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F +FFE++ H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLRFFEEQGHTRVASSSLIPGNDPTLLFTNAGMNQFKDCFLGQ-----EKRAY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           TRA ++QKC+RAGGK++DL++VG    HHTFFEMLGN+SFGDYFK +AI +AW  LT V 
Sbjct: 58  TRATSSQKCVRAGGKNSDLENVGYTARHHTFFEMLGNFSFGDYFKKDAITFAWTFLTGVL 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFWEM 230
           +LP ++L+ T +        A D+EA DIW + +  PA R++  G         DNFW M
Sbjct: 118 KLPKEKLWVTVY--------ATDDEAYDIWTQQIGVPAERMIRIGDNKGAPYASDNFWTM 169

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG L PLPA 
Sbjct: 170 GDTGPCGPCTEIFYDHGDDIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLPAP 229

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+++++Q+  SNY+ D+F  +  A   A G            A++   + +
Sbjct: 230 SVDTGMGLERISAVMQHVHSNYEIDLFTNLLSASAAAIGC-----------ANEGQSSLK 278

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           VV+DHIR+  F IADG  P NEGR YVLRRI+RRA R+G++ L A   FF  +V  +V  
Sbjct: 279 VVSDHIRSCGFLIADGVLPSNEGRGYVLRRIIRRACRHGNK-LGATGSFFYKIVAALVAE 337

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MGD FPELKQ++++I  ++ AEE  F KTL  G++  ++   +++G V+ G   F L+DT
Sbjct: 338 MGDAFPELKQQQSNIERVLKAEEEQFSKTLEHGLKILEQDLAELKGTVVPGDVVFKLYDT 397

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +A ER L VD  GF   M+  R R+RSA +       ++  D        
Sbjct: 398 YGFPMDLTADIARERELTVDEAGFEREMEAQRVRARSASSFGLDYNTLVKVDVPTEF--T 455

Query: 529 GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDE 588
           G  AT  S K I          AIY   + ++ +  G E  +VL  + FYAE GGQI D 
Sbjct: 456 GYKATAGSAKII----------AIYKDGKSVDVLSEGEEAVVVLDQTPFYAESGGQIGDC 505

Query: 589 GFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
           GF+    G F VR+    GG  +H G L    G  +VG  V  +VD D R   A NH+ T
Sbjct: 506 GFLSSTSGRFDVRDTTKTGGAFLHHGVLV--LGNLTVGAPVDTQVDADVRHATALNHSAT 563

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+L+ ALR+VLG+HV QKGS+V  ++LRFDFSH + + PE ++ +E IVN +I+    V 
Sbjct: 564 HLLHAALRQVLGEHVQQKGSLVDSQRLRFDFSHFEAIKPEQIKALEDIVNAEIRKNTPVE 623

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
           ++E  +  A+   G  A+FGE Y D VRV+++G                S S ELCGG H
Sbjct: 624 TEETDIETARN-KGAMALFGEKYGDEVRVLSMGG---------------SFSVELCGGIH 667

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAF--------EAACSLEKEVDDASK 820
            + T +     ++SE G+A G+RRI AVT   A            EAA  ++   D+   
Sbjct: 668 ANRTGDIGLLKIISEGGVASGVRRIEAVTGAAALAYLNAAEEQLKEAAGLVKGSRDNLID 727

Query: 821 IEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEV-GLDAAAVR 879
              ++LE+N   +A +K  E+   KA   A +   AAA + K   +    + G D  A+ 
Sbjct: 728 KLSAVLERN---RALEKQLEQLQAKAASAAGDDLSAAAVDVKDVKVLAARLDGQDGKALL 784

Query: 880 EAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCG 939
             V ++  + G  V++  +    +K V+ AGV +  D + QL+  + +  A   + G+ G
Sbjct: 785 ALVDQLKNKLGRAVILLGSVH-EDKVVLVAGVTK--DLTGQLKAGDLMKQAAATVGGK-G 840

Query: 940 KGKGGLASGQG 950
            G+  +A G G
Sbjct: 841 GGRPDMAQGGG 851


>gi|417541247|ref|ZP_12193028.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Wandsworth str. A4-580]
 gi|353661146|gb|EHD00564.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Wandsworth str. A4-580]
          Length = 900

 Score =  590 bits (1522), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 359/931 (38%), Positives = 523/931 (56%), Gaps = 97/931 (10%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT    +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP +RL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 ALPKERLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNYD D+F  + +A+ + TGA     K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYDIDLFRTLIEAVAKVTGATDLGNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F +ADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  +++V
Sbjct: 283 VIADHIRSCAFLVADGVLPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIEV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    ELK+++A + +++  EE  F +TL +G+    +    +QG  L G+ AF L+DT
Sbjct: 342 MGSAGEELKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQN---KQAGGAIVMDADATAAL 525
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R A     ++A  A    AD  A  
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGAERAREASGFGADYNA-- 459

Query: 526 HKRGVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQG 582
               ++  D + +F  + DH  +   + A++   + ++++  G E  +VL  + FYAE G
Sbjct: 460 ----MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESG 514

Query: 583 GQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIA 642
           GQ+ D+G ++G   +F V + Q YG  + H+G L+ GA    VG+ V   VD  RR  I 
Sbjct: 515 GQVGDKGELKGAGFTFAVDDTQKYGQAIGHLGKLSAGA--LKVGDAVQADVDEARRARIR 572

Query: 643 PNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIK 702
            NH+ TH+++ ALR+VLG HV QKGS+V  + LRFDFSH + + P  +R +E +VN QI+
Sbjct: 573 LNHSATHLMHAALRQVLGTHVAQKGSLVSDKVLRFDFSHNEAMKPSEIREVEDLVNAQIR 632

Query: 703 AELDVFSKEATLAE------------AKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLAD 750
             L + +    L               +  +G  A+FGE Y + VRV+++G         
Sbjct: 633 RNLPIETNIMDLDAAKAKGAMAMALFGEKYDGAMALFGEKYDERVRVLSMG--------- 683

Query: 751 PENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEA--- 807
                    S ELCGGTH S T +   F ++SE G A GIRRI AVT   A     A   
Sbjct: 684 -------DFSTELCGGTHASRTGDIGLFRIISESGTAAGIRRIEAVTGEGAMATVHAQSD 736

Query: 808 -----ACSLEKEVDDASKIEGSLLEKNQVRKAQKKVAEENLQKAVK-VATETAEAAASNG 861
                A  L+ +  + S    ++LE+   R+ +K++ +   Q A +  A  +++A   NG
Sbjct: 737 RLNDIAHLLKGDSQNLSDKVRAVLER--TRQLEKELQQLKDQAAAQESANLSSKAVDLNG 794

Query: 862 KPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQL 921
               +S +  G++   +R  V  +  Q G  V+V +T     K  + AGV +  D + ++
Sbjct: 795 VKLLVSEL-AGIEPKMLRTMVDDLKNQLGSTVIVLAT-VVEGKVSLIAGVSK--DVTDRV 850

Query: 922 EVSEWLTAALQPLKGRCGKGKGGLASGQGTD 952
           +  E +    Q + G+ G G+  +A   GTD
Sbjct: 851 KAGELIGMVAQQVGGKGG-GRPDMAQAGGTD 880


>gi|398934047|ref|ZP_10666124.1| alanine--tRNA ligase [Pseudomonas sp. GM48]
 gi|398159457|gb|EJM47758.1| alanine--tRNA ligase [Pseudomonas sp. GM48]
          Length = 873

 Score =  590 bits (1522), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 358/893 (40%), Positives = 504/893 (56%), Gaps = 90/893 (10%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F +FFE++ H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLRFFEEQGHTRVASSSLIPGNDPTLLFTNAGMNQFKDCFLGQ-----EKRAY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           TRA ++QKC+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AW  LT  K
Sbjct: 58  TRAVSSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAISYAWNFLTSDK 117

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFW 228
              LP ++L+ T +        A D+EA DIW K +  PA R++  G         DNFW
Sbjct: 118 WLNLPKEKLWVTVY--------ASDDEAYDIWTKDIGVPAERMVRIGDNKGAPYASDNFW 169

Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
            MGDTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG L PLP
Sbjct: 170 TMGDTGPCGPCTEIFYDHGADIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLP 229

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
           A  VDTG+G ER++++LQ+  SNY+ D+F  + +A  +A G             +    +
Sbjct: 230 APSVDTGMGLERISAVLQHVHSNYEIDLFQSLLNAAAKAVGC-----------TNDAQAS 278

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            +VVADHIR+  F IADG  P NEGR YVLRRI+RRA R+G++ L A+  FF  +V  +V
Sbjct: 279 LKVVADHIRSCGFLIADGVLPSNEGRGYVLRRIIRRACRHGNK-LGAKGSFFYQIVAALV 337

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
             MG+ FPELK ++AHI  ++ AEE  F KTL +G++  ++   +++G V+ G   F L+
Sbjct: 338 AEMGEAFPELKSQQAHIERVLKAEEEQFAKTLEQGLKILEQDLAELKGDVVPGDVVFKLY 397

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFP+DLT  +A ER L +D EGF   M+  R R+RSA       +  MD ++     
Sbjct: 398 DTYGFPMDLTGDIARERSLTIDEEGFEREMEAQRVRARSAS------SFGMDYNS----- 446

Query: 527 KRGVLATDDSFKFIWFQDHKSVIK--AIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
              ++  D + +F  +  H    K  AIY   + ++ +  G E  IVL  + FYAE GGQ
Sbjct: 447 ---LVKVDVATEFTGYTAHSGSAKIVAIYKDGQSVDVLSEGEEGVIVLDQTPFYAESGGQ 503

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           I D GF++     F VR+    GG  +H G L  G+    VG  V   VD + R   + N
Sbjct: 504 IGDCGFLQAGAARFDVRDTTKTGGAFLHHGVLDSGS--LIVGTPVETHVDAEVRHATSLN 561

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ ALR+VLGDHV QKGS+V  ++LRFDFSH + + PE L+ +E IVN +I+  
Sbjct: 562 HSATHLLHAALRQVLGDHVQQKGSLVDSQRLRFDFSHFEAIKPEQLKALEDIVNAEIRKN 621

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
            +V ++E  +  AK   G  A+FGE Y D VRV+++G                  S ELC
Sbjct: 622 SEVETEETDIETAKQ-KGAMALFGEKYGDSVRVLSMG----------------DFSVELC 664

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAF--------EAACSLEKEVD 816
           GG H + T +     ++SE G+A G+RRI AVT   A            EAA  ++   D
Sbjct: 665 GGIHANRTGDIGLLKIISEGGVASGVRRIEAVTGAAALAYLNAAEEQLKEAANLVKGSRD 724

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQ-KAVKVATETAEAAASNGKPFCISRVEV-GLD 874
           +      ++LE+N++ + Q     E LQ KA   A +   A A + K   +  V + G D
Sbjct: 725 NLIDKLSAVLERNRLLEKQL----EQLQAKAASAAGDDLSAQALDVKDVKVLAVRLDGQD 780

Query: 875 AAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWL 927
             A+   V ++  + G  V++  +     K V+ AGV +  D + QL+  + +
Sbjct: 781 GKALLALVDQLKNKLGRAVILLGSVH-EEKVVLVAGVTK--DLTGQLKAGDLM 830


>gi|399926850|ref|ZP_10784208.1| alanyl-tRNA ligase [Myroides injenensis M09-0166]
          Length = 875

 Score =  590 bits (1522), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 343/837 (40%), Positives = 483/837 (57%), Gaps = 66/837 (7%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R  F  FFE++ H+   S+P+V  +DPTL+F N+GM Q+K  FLG A P     K 
Sbjct: 3   SQEIRQKFLNFFEERGHMIVPSAPIVLKDDPTLMFNNSGMAQFKEYFLGNAKP-----KS 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  +TQKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWELLT+VY
Sbjct: 58  NRITDTQKCLRVSGKHNDLEEVGIDTYHHTMFEMLGNWSFGDYFKKEAINWAWELLTEVY 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           ++P D LY T F G E+  +  D EA DIW   +   R+L    KDNFWEMGD GPCGPC
Sbjct: 118 KIPKDILYVTVFEGSEEENVPFDQEAYDIWSTLVDKDRILMGNKKDNFWEMGDQGPCGPC 177

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           +EIH D     + A      LVN D P  +EIWN VF++FNR++DGSL+ LPA+HVDTG+
Sbjct: 178 TEIHVDIRSEEEKAKIAGRDLVNGDHPQVVEIWNNVFMEFNRKADGSLEKLPAQHVDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL  +LQ   SNYDTDVF P+   + +  G + Y+ K   ++ +K+++A RV+ DH+
Sbjct: 238 GFERLCMVLQGVQSNYDTDVFSPLIAKVSELAGGK-YTIKAANEEEEKINIAIRVIVDHV 296

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R ++FAIADG  P N G  YV+RRILRRA+RY    L  ++ F   LV+++   MGD FP
Sbjct: 297 RAVAFAIADGQLPSNNGAGYVIRRILRRAIRYAFTFLDKKEPFIYELVDVLSTQMGDFFP 356

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLD 474
           E+  ++  ++ +I  EEASF +TL +G+       +  +GKV+SG  AF L+DT+GFP+D
Sbjct: 357 EITSQKELVKNVIREEEASFLRTLEQGLHLLDNVIKHTEGKVVSGVKAFELYDTFGFPID 416

Query: 475 LTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATD 534
           LT L+  E+G  +D  GF+ AM E + RSR+A         V   D T       VL   
Sbjct: 417 LTALILREKGYELDEAGFDAAMLEQKTRSRAASE-------VSTDDWT-------VLIPG 462

Query: 535 DSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGL 594
           +  +F+ +   ++ +K   T    ++S   G    IVL ++ FY E GGQ+ D G +   
Sbjct: 463 NVEQFVGYDQLENEVK--ITRYRKVDSKKDGKLFQIVLDTTPFYPEGGGQVGDSGVLVSA 520

Query: 595 FGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFA 654
                V + +     ++HI          +V   +I KV+ D RK    NH+ TH+L+ A
Sbjct: 521 NDMIEVIDTKKENNLILHIVRELPS----NVEATLIAKVNVDARKQSMANHSATHLLHQA 576

Query: 655 LREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATL 714
           LR +LG HV+QKGS+V P  LRFDFSH   V  E L  +E+ VN++I  +L +  + +  
Sbjct: 577 LRSILGTHVEQKGSLVSPTHLRFDFSHFAKVTEEELAEVEAFVNDRIHEQLPLVERRSIP 636

Query: 715 AEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTRE 774
                  G  A+FGE Y D VR +  G                  S ELCGGTH++NT +
Sbjct: 637 FAQAIEEGAMALFGEKYGDEVRAIRFGD-----------------SMELCGGTHVANTAD 679

Query: 775 AEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV-------DDASKIEGSLLE 827
              F ++SE  +A GIRRI A+T   A + +     + KE+        D  K   SL +
Sbjct: 680 IWQFKIVSEGAVAAGIRRIEAITNKAARQFYSEQEDVLKELKTVLKNPQDTLKAVISLQD 739

Query: 828 KN-QVRKAQKKVAEE---NLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVRE 880
           +N +++K  +++ +E   NL+  +K   E       NG  F  + V+  LDA+  ++
Sbjct: 740 ENAKLKKQVEQLLKEKAKNLKGELKATIEEI-----NGIAFLAAVVD--LDASGAKD 789


>gi|336172740|ref|YP_004579878.1| alanyl-tRNA synthetase [Lacinutrix sp. 5H-3-7-4]
 gi|334727312|gb|AEH01450.1| alanyl-tRNA synthetase [Lacinutrix sp. 5H-3-7-4]
          Length = 871

 Score =  590 bits (1522), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 342/860 (39%), Positives = 472/860 (54%), Gaps = 66/860 (7%)

Query: 63  VRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRA 122
           +R TF  FFE K H    S+P+V  +DPTL+F NAGM  +K  FLG ++P     K TR 
Sbjct: 6   IRSTFLNFFEKKKHSIVPSAPMVLKDDPTLMFVNAGMVPFKEYFLGNSEP-----KNTRL 60

Query: 123 CNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLP 182
            ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWELLT+VY++ 
Sbjct: 61  TDSQKCLRVSGKHNDLEEVGYDTYHHTLFEMLGNWSFGDYFKKEAIAWAWELLTEVYKID 120

Query: 183 ADRLYATYFGGDEKAG-LAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPCSE 241
            D LY T F G E +  L  D EA DIW +++   R+L    KDNFWEMG+ GPCGPCSE
Sbjct: 121 KDILYVTVFEGSEDSDKLDMDTEAYDIWKQYISEDRILKGNKKDNFWEMGEQGPCGPCSE 180

Query: 242 IHYD-RTGNRDAA----SLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGF 296
           IH D R+    A      LVN D P  +EIWN+VF+Q+NR+++GSL+ LP KH+DTG+GF
Sbjct: 181 IHVDIRSAEEKAKVNGKDLVNMDHPQVVEIWNLVFMQYNRKANGSLEGLPNKHIDTGMGF 240

Query: 297 ERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRT 356
           ERL  +LQN  SNYDTDVF PI   I+  T  + Y+        +K D+A RV++DH+R 
Sbjct: 241 ERLCMVLQNVQSNYDTDVFTPIIREIETITD-KEYNKN------EKTDIAIRVISDHVRA 293

Query: 357 LSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPEL 416
           ++F+IADG  P N G  YV+RRILRRAVRYG   L  ++ F   LV+++   MG+ FPEL
Sbjct: 294 VAFSIADGQLPSNTGAGYVIRRILRRAVRYGFTFLDKKEPFIYRLVDVLSDKMGEAFPEL 353

Query: 417 KQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLT 476
           K ++  I  +I  EE SF +TL +G+    +  +  +GK + G   F L DTYGFP DLT
Sbjct: 354 KTQKQLIENVIKEEETSFLRTLDQGLLLLDRIIETTKGKEVLGAKVFELKDTYGFPEDLT 413

Query: 477 QLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDS 536
            L+  E+G   ++E FN  +++ + R R +       A+  D   T        L  D  
Sbjct: 414 DLILREKGYTYNVEEFNAELEKQKSRGRES------SALKSDDWTT--------LVEDAE 459

Query: 537 FKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFG 596
            +FI +   ++ +K   T    + S   G    +V   + FYAE GGQ+ D+G++E   G
Sbjct: 460 QEFIGYDALEANVKI--TRYRKVTSKKDGEMYQLVFNLTPFYAEGGGQVGDKGYLEDAHG 517

Query: 597 S-FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFAL 655
              Y+ + +     +IH            + E     VD  +R     NHT TH+L+  L
Sbjct: 518 DVVYILDTKKENNVIIHFAKNLPK----HLNETFKAVVDAKQRYRTECNHTATHLLHQGL 573

Query: 656 REVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLA 715
           REVLG HV+QKGS V  + LRFDFSH   V  E L+ +E  VN +I  +L++        
Sbjct: 574 REVLGTHVEQKGSAVHSKYLRFDFSHFSKVTNEQLQEVEDFVNRRIDGKLELEENRNVPM 633

Query: 716 EAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREA 775
           +    +G  A+FGE Y D VR +  G+                 S ELCGGTH+ NT + 
Sbjct: 634 DQAIEDGAMALFGEKYGDTVRTIRFGQ-----------------SIELCGGTHVKNTSDI 676

Query: 776 EAFALLSEEGIAKGIRRITAVTTGLA-------YKAFEAACSLEKEVDDASKIEGSLLEK 828
             F ++SE  +A GIRRI A+T+           K F    SL     D  +    L  +
Sbjct: 677 WHFKIVSEGAVASGIRRIEAITSDAVKDFYAENSKVFSEMKSLLNNAKDPKEALVKLQTE 736

Query: 829 NQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQ 888
           N   K Q +   ++  K +K   E       NG  F   +V+  LDA+ +++    + ++
Sbjct: 737 NNDLKKQIESLLKDKAKNLKAELEN-NLTEINGVQFLAEKVD--LDASGIKDVAFDLGQK 793

Query: 889 KGMPVMVFSTDETTNKAVVC 908
                ++F  D      + C
Sbjct: 794 HKNLFLIFGADTGGKALLTC 813


>gi|256822655|ref|YP_003146618.1| alanyl-tRNA synthetase [Kangiella koreensis DSM 16069]
 gi|256796194|gb|ACV26850.1| alanyl-tRNA synthetase [Kangiella koreensis DSM 16069]
          Length = 875

 Score =  590 bits (1522), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 357/934 (38%), Positives = 524/934 (56%), Gaps = 86/934 (9%)

Query: 61  TKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLT 120
            ++R+ F  FFE+K H    SSP++P NDPTLLF NAGM Q+K  FLG           T
Sbjct: 4   NQIRNAFLTFFENKGHHIVDSSPLIPANDPTLLFTNAGMVQFKDCFLGIDK-----RSYT 58

Query: 121 RACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYR 180
           RA ++Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK EAI + WELLT+ ++
Sbjct: 59  RATSSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKKEAIAYCWELLTEEFK 118

Query: 181 LPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFWEMG 231
           LP ++L+ T +          D+EA DIW+  +  PA R+   G         DNFW MG
Sbjct: 119 LPKEKLWVTVY--------EEDDEAFDIWVNDIGFPADRISRIGDNKGERYASDNFWAMG 170

Query: 232 DTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKH 289
           DTGPCGPCSE+ YD               D    IEIWN+VF+QFNR+ DG+++ LP   
Sbjct: 171 DTGPCGPCSEVFYDHGEEIWGGPPGTPEEDGDRFIEIWNLVFMQFNRQKDGTMERLPKPS 230

Query: 290 VDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRV 349
           VDTG+G ER+ +ILQ   SNY+ D+F  +  +       +    K           + RV
Sbjct: 231 VDTGMGLERIAAILQGVHSNYEIDLFQHLIKSTADLLKVKDLDNK-----------SLRV 279

Query: 350 VADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVM 409
           +ADHIR+ +F I DG  P NEGR YVLRRI+RRAVR+G + L A+  FF  LV  +++VM
Sbjct: 280 IADHIRSCAFLILDGIVPSNEGRGYVLRRIVRRAVRHGHQ-LGAKGIFFAKLVQPLIEVM 338

Query: 410 GDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV---QGKVLSGQDAFILW 466
           G+ +P L +++  I +++A EE +F +TL KG+    +   D+    GK +SG   F L+
Sbjct: 339 GEAYPALVEQKELIEKVLAKEEEAFARTLDKGMLILDQDIADLVETNGKTISGDTVFKLY 398

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFP DLT  +A E+GL VD +GF  AM++ RER+R+A N         D +   ++ 
Sbjct: 399 DTYGFPQDLTADIAREKGLEVDWDGFEKAMNQQRERARAASN------FGTDYNDNFSID 452

Query: 527 KRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           +R        F    +     V+  +  G + ++ +  G +  ++LA + FYAE GGQ+ 
Sbjct: 453 ER------SEFTGYHYTQQNVVVTRLLKGEDEVKELDQGEKGVVILAKTPFYAEAGGQVG 506

Query: 587 DEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
           D G + G   +F V + Q  G  + HIG +  G+  FS   E+  +VD +RR+    NH+
Sbjct: 507 DTGRLFGCGATFIVEDTQKLGDAIAHIGYVQRGS--FSNDAELTAEVDAERRQHTMRNHS 564

Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD 706
            TH+L+ ALR++LG HV QKGS+V PE+LRFDFS+ +PV  E LR+IE++VN++I     
Sbjct: 565 ATHLLHAALRDILGTHVTQKGSLVGPERLRFDFSNPEPVTQEQLRQIEALVNQKIYENHA 624

Query: 707 VFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGG 766
           V +   ++ EAK  +G  A+FGE Y D VRV+ +                   S ELCGG
Sbjct: 625 VEAATMSMDEAKE-HGAMALFGEKYGDEVRVLTMS----------------PFSVELCGG 667

Query: 767 THLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLL 826
           TH+  T +  AF +LSE GIA GIRRI A T   A    ++  +  + +    K E S +
Sbjct: 668 THVQRTGDIGAFKILSESGIAAGIRRIEATTGAGAVNWMQSTEASLQSIGKLLKSEPSQV 727

Query: 827 EK--NQVRKAQKKVAE--ENLQKAVKVATETAEAAAS-----NGKPFCISRVEVGLDAAA 877
            +  NQ+    +++ +  E LQ   K+A+      AS     NG    ++++E G++A A
Sbjct: 728 AEKVNQLMDKSRQLEKTIEALQS--KLASSQGSDLASQAEDLNGIKLLVAKLE-GVEAKA 784

Query: 878 VREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGR 937
           +R+   ++  + G  ++V    E  +K  +  GV +  D + +++  E +      + G+
Sbjct: 785 LRDIQDQLKNKLGSSIVVLGIAE-EDKVSIIVGVSK--DLTGKVKAGELVNMVASQVGGK 841

Query: 938 CGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
            G G+  +A   G D A +  A+D    + A +L
Sbjct: 842 GG-GRPDMAQAGGKDPAALPAALDSVKPWVAERL 874


>gi|307245509|ref|ZP_07527596.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|306853568|gb|EFM85786.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
          Length = 874

 Score =  590 bits (1522), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 362/939 (38%), Positives = 515/939 (54%), Gaps = 97/939 (10%)

Query: 61  TKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLT 120
           +++R +F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG      +    T
Sbjct: 5   SEIRQSFLDFFHSKGHTVVPSSSLVPENDPTLLFTNAGMNQFKDVFLGL-----EKRPYT 59

Query: 121 RACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KV 178
           RA   Q+C+RAGGKHNDL++VG    HHTFFEM+GN+SFGDYFK++AI++ WE LT  + 
Sbjct: 60  RATTAQRCVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKHDAIQFGWEYLTSPQW 119

Query: 179 YRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFWE 229
             LP ++LY T +          D+EA DIW K +  P   ++  G         DNFW 
Sbjct: 120 LGLPKEKLYVTVY--------ETDDEAYDIWNKIVGVPTDHIIRIGDNKGAPYASDNFWA 171

Query: 230 MGDTGPCGPCSEIHYDRTGNRDAASLVNN---DDPTCIEIWNIVFIQFNRESDGSLKPLP 286
           MGDTGPCGPC+EI YD  G      L  +   D    IE+WNIVF+QFNR +DG+++ LP
Sbjct: 172 MGDTGPCGPCTEIFYDH-GETFWGGLPGSPEEDGDRYIEVWNIVFMQFNRLADGTMEKLP 230

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
              VDTG+G ER+T+++Q+  SNY+TD+F  +   +         +G +   D D  + +
Sbjct: 231 KPSVDTGMGLERMTAVMQHVNSNYETDIFQTLIKEV---------AGLLNVSDLD--NKS 279

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            RVVADHIR  S+ IADG  P NEGR YVLRRI+RRAVR+G+ +L A++ FF  LV  + 
Sbjct: 280 LRVVADHIRACSYLIADGVVPSNEGRGYVLRRIIRRAVRHGN-LLGAKEAFFYKLVPTLA 338

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
            VMG     L Q++AHI++ + AEE  F +TL +G+   + A   V+   LSG+ AF L+
Sbjct: 339 TVMGHAGEVLTQKQAHIQKTLKAEEEQFARTLERGLALLEDALTKVENNTLSGEVAFKLY 398

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFPLDLT  +  ER L +D  GF   M   RER++++ N                  
Sbjct: 399 DTYGFPLDLTADVCRERELTIDKAGFEAEMTAQRERAKASSN--------------FGTD 444

Query: 527 KRGVLATDDSFKFIWFQD--HKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
              V+  +    FI + +   ++ I  +++  + ++++  G    I+L  + FYAE GGQ
Sbjct: 445 YNNVIKVEGQTDFIGYDNLEAQATIVGLFSNGKAVDTIQSGESAVIILDQTPFYAEMGGQ 504

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           + D G I     +F V + Q YG    HIG LT G+   S+G++V   VD  RR  I  N
Sbjct: 505 VGDSGLISTGICNFAVNDTQKYGQVFGHIGQLTSGS--LSIGDKVTATVDATRRVAITAN 562

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ ALREVLGDHV QKGS+V    LRFDFS  + +    L  IE IVN +I+  
Sbjct: 563 HSATHLLHSALREVLGDHVAQKGSLVSENILRFDFSQPEAISKSQLEEIERIVNRKIREN 622

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
           + V  +   +  AK   G  A+FGE Y D VRVV +                   S ELC
Sbjct: 623 IQVTIETMDIESAKK-KGAMALFGEKYGDVVRVVGM----------------TEFSIELC 665

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKI--- 821
           GGTH+  T +   F L+SE  +A GIRR+ AVT   A  A E   + +K +  +++    
Sbjct: 666 GGTHVQRTGDIGLFKLVSEGAVAAGIRRVEAVT---AETAIEWLHNQQKVLQQSAEFLKA 722

Query: 822 -EGSLLEKNQVRKAQKKVAEENLQK-----AVKVATETAEAAAS-NGKPFCISRVEVGLD 874
              SL+EK Q  + + K  E+ LQ+     A +  +E  + A   NG    + ++E  ++
Sbjct: 723 DSNSLVEKIQQLQDKAKRTEKELQQLKDKLAAQAGSELVKQANKINGVNVVVQKLE-NVE 781

Query: 875 AAAVREAVLKVIEQKGMPVMVFST--DETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQ 932
             ++R  V  +  Q    ++VF T  DE  N   +  GV +  D S ++   E + A  Q
Sbjct: 782 VKSLRTMVDDLKNQLESAIVVFGTVADEKVN---LIVGVTK--DLSSKVNAGELVGAMAQ 836

Query: 933 PLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
            + G+ G G+  +A   G++   +  A+  A E+   KL
Sbjct: 837 QVGGKGG-GRADMAMAGGSEPQNLDNALKFAEEWIQAKL 874


>gi|300778975|ref|ZP_07088833.1| alanine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
 gi|300504485|gb|EFK35625.1| alanine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
          Length = 867

 Score =  590 bits (1522), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 346/874 (39%), Positives = 490/874 (56%), Gaps = 79/874 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R  F  +F+ K H+   S+P+V  +DPTL+F+N+GM Q+K  FLG   P       
Sbjct: 3   SQEIRQKFLDYFKSKEHLIVPSAPIVLKDDPTLMFSNSGMTQFKDFFLGYKTPTA----- 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  +TQKC+R  GKHNDLDDVG+DTYHHT FEMLGNWSFGDYFK EAI +AWELLT+VY
Sbjct: 58  PRIADTQKCLRVSGKHNDLDDVGRDTYHHTMFEMLGNWSFGDYFKKEAIAFAWELLTEVY 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
            +P + LY T F GD    L  D  A D W   +   R++    KDNFWEMG++GPCGPC
Sbjct: 118 GIPKENLYVTIFEGDASENLDRDQNAYDFWKSHISEDRIINGNKKDNFWEMGESGPCGPC 177

Query: 240 SEIHYD-RTGNRDAA----SLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D RT    AA    SLVN D P  +E+WN+VF++FNR++D SL+ LPA+HVDTG+
Sbjct: 178 SEIHIDLRTPEEKAAVPGISLVNKDHPQVVEVWNLVFMEFNRKADKSLEKLPAQHVDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF P+   +++ +G + Y+G +     D+ D+A RVV DHI
Sbjct: 238 GFERLCMALQGKSSNYDTDVFTPLIAKVEELSGKK-YTGIL----EDEKDIAIRVVVDHI 292

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R +SFAIADG  P + G  YV+RRILRR + Y    L  ++ F   LV ++ + MG  FP
Sbjct: 293 RAVSFAIADGQLPSSGGAGYVIRRILRRGISYSYRFLGMKEPFLYKLVAVLQEQMGPFFP 352

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV---QGKVLSGQDAFILWDTYGF 471
           E++++   + E+I +EE SF  T+  G+ + +K  Q       KVL   + F L+DTYGF
Sbjct: 353 EIEKQGKLVTEVIKSEEDSFLNTIETGLIRVEKLIQQTIADNQKVLPTLEVFELYDTYGF 412

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           P DLT+++AEE+GL +D EGF    ++ R+RS+    ++    +V++    +        
Sbjct: 413 PDDLTRIIAEEKGLTIDEEGFKAEREKQRKRSQQDSAQKVYDWVVLEEKPES-------- 464

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
                  F+ +   +S  +   T    +E+   G    +VL+SS FY E GGQ+ D+G +
Sbjct: 465 -------FVGYDQIES--ETYITRYRKVENK-DGEFYQVVLSSSPFYPEGGGQVGDKGVL 514

Query: 592 EGLFGSFYVRNVQIYGGFVIH-IGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHM 650
           E    SF V   +   G +I  I  L + AG          KV+   RK    NH+ TH+
Sbjct: 515 ENAAESFQVLETKKENGLIISLINGLPKDAGAL-----FYAKVNASERKNSQANHSVTHL 569

Query: 651 LNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSK 710
           L+ ALR+VLG HV+QKGS V P+ LRFDFSH   +  E +  IE  VN +IK  + +   
Sbjct: 570 LHEALRDVLGTHVEQKGSYVGPDYLRFDFSHFNKMTEEEIALIEEKVNHKIKESIALQEF 629

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
            +   +     G  A+FGE Y D VR++  G                  S ELCGGTH+ 
Sbjct: 630 RSIPIQEALDKGAMALFGEKYGDNVRMIQFGS-----------------SKELCGGTHVK 672

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKNQ 830
           NT E   F + SE   A GIRRI A++   + + F+   +LEK++ + S++   L  K+ 
Sbjct: 673 NTSEIGHFKITSEGSAAAGIRRIEAISGDKSEEYFK---NLEKQITELSQL---LKSKDV 726

Query: 831 VRKAQKKVAEENLQKAVKVATETAEAAASNG-----------KPFCISRVEVGLDAAAVR 879
           VR  +K + E    KA   A +  +A    G           K   + +    LDA +V+
Sbjct: 727 VRSIEKLIEENTSLKAEVDALKKEKAKGEIGEWKNAYEQKGNKQLLVKK--TSLDAGSVK 784

Query: 880 EAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPE 913
           + V ++  +    V +  +D    K ++  GV +
Sbjct: 785 DIVFQLKREIPSSVTIILSD-ADGKPMITVGVSD 817


>gi|422591939|ref|ZP_16666573.1| alanyl-tRNA synthetase [Pseudomonas syringae pv. morsprunorum str.
           M302280]
 gi|330879688|gb|EGH13837.1| alanyl-tRNA synthetase [Pseudomonas syringae pv. morsprunorum str.
           M302280]
          Length = 874

 Score =  590 bits (1522), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 362/931 (38%), Positives = 524/931 (56%), Gaps = 88/931 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F  FFE++ H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLGFFEEQGHTRVASSSLIPGNDPTLLFTNAGMNQFKDCFLGQ-----EKRAY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           TRA  +QKC+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AW  LT  K
Sbjct: 58  TRAVTSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAITYAWTFLTSEK 117

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFW 228
              LP ++L+ T +        A D+EA DIW K +  PA R++  G         DNFW
Sbjct: 118 WLNLPKEKLWVTVY--------ATDDEAYDIWTKEIGVPAERMVRIGDNKGAPYASDNFW 169

Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
            MGDTGPCGPCSEI +D   +           D    IEIWN VF+QFNR +DG L PLP
Sbjct: 170 TMGDTGPCGPCSEIFFDHGADIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLP 229

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
           A  VDTG+G ER++++LQ+  SNY+ D+F  +  A  +A G            ++    +
Sbjct: 230 APSVDTGMGLERVSAVLQHVHSNYEIDLFQSLLAASARAIGC-----------SNDNQAS 278

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            +VVADHIR+  F IADG  P +EGR YVLRRI+RRA R+G++ L A+  FF  +V  +V
Sbjct: 279 LKVVADHIRSCGFLIADGVLPSSEGRGYVLRRIIRRACRHGNK-LGAKGSFFYQIVAALV 337

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
             MG  FPEL Q+++HI  ++  EE  F KTL +G++  ++   +++G V+ G+  F L+
Sbjct: 338 TEMGSAFPELVQQQSHIERVLKGEEEQFAKTLEQGLKIIEQDLAELKGTVVPGEIVFKLY 397

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFP+DLT  +A ER L +D EGF   M+  R R+RSA       +  MD ++     
Sbjct: 398 DTYGFPMDLTGDIARERNLTLDEEGFEREMEAQRVRARSAS------SFGMDYNS----- 446

Query: 527 KRGVLATDDSFKFIWFQ--DHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
              ++  D + +F  +      + + A+Y   + +  +  G E  ++L ++ FYAE GGQ
Sbjct: 447 ---LVKVDVATQFTGYSATTGSASVVALYKDGQSVTHLNEGEEGVVILDTTPFYAESGGQ 503

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           I D GF+      F V +    GG  +H G +  G+   SVG +V  +V  + R     N
Sbjct: 504 IGDSGFLLAGDARFDVSDTTKTGGAFLHHGVVASGS--LSVGVQVETQVADEVRDATKLN 561

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ ALR+VLG+HV QKGS+V  ++LRFDFSH + + PE LR +E IVN +I+  
Sbjct: 562 HSATHLLHAALRQVLGEHVQQKGSLVDSQRLRFDFSHFESIKPEQLRALEDIVNAEIRKN 621

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
             V ++E  +  AK   G  A+FGE Y D VRV+++G +                S ELC
Sbjct: 622 TPVVTEETDIDTAKK-KGAMALFGEKYGDSVRVLSMGGE---------------FSVELC 665

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEG- 823
           GG H S T +   F ++SE G+A G+RRI AVT   A     +A    KE   A+ ++G 
Sbjct: 666 GGIHASRTGDISLFKIVSEGGVAAGVRRIEAVTGAAALAWLNSAEDQLKEA--ATLVKGN 723

Query: 824 --SLLEKNQVRKAQKKVAEENLQ----KAVKVATETAEAAASN--GKPFCISRVEVGLDA 875
             +LL+K      + ++ E+ L+    KA   A +   +AA +  G     +R++ G D 
Sbjct: 724 RDNLLDKLTAVLERNRLLEKQLEQLQAKAASAAGDDLSSAALDVKGVKVLATRLD-GQDG 782

Query: 876 AAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLK 935
            A+   V ++  + G  V++  +    +K V+ AGV +  D + QL+  + +  A   + 
Sbjct: 783 KALLALVDQLKNKLGRAVILLGSVH-EDKVVLVAGVTK--DLTGQLKAGDLMKQAATAVG 839

Query: 936 GRCGKGKGGLASGQGTDAAQVTPAMDLAAEF 966
           G+ G G+  +A G G DA  +  A+ LA  F
Sbjct: 840 GK-GGGRPDMAQGGGVDATALDSALALAVPF 869


>gi|307254463|ref|ZP_07536300.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|307258922|ref|ZP_07540653.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11
           str. 56153]
 gi|306862604|gb|EFM94561.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|306866946|gb|EFM98803.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11
           str. 56153]
          Length = 874

 Score =  590 bits (1521), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 362/939 (38%), Positives = 515/939 (54%), Gaps = 97/939 (10%)

Query: 61  TKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLT 120
           +++R +F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG      +    T
Sbjct: 5   SEIRQSFLDFFHSKGHTVVPSSSLVPENDPTLLFTNAGMNQFKDVFLGL-----EKRPYT 59

Query: 121 RACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KV 178
           RA   Q+C+RAGGKHNDL++VG    HHTFFEM+GN+SFGDYFK++AI++ WE LT  + 
Sbjct: 60  RATTAQRCVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKHDAIQFGWEYLTSPQW 119

Query: 179 YRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFWE 229
             LP ++LY T +          D+EA DIW K +  P   ++  G         DNFW 
Sbjct: 120 LGLPKEKLYVTVY--------ETDDEAYDIWNKIVGVPTDHIIRIGDNKGAPYASDNFWA 171

Query: 230 MGDTGPCGPCSEIHYDRTGNRDAASLVNN---DDPTCIEIWNIVFIQFNRESDGSLKPLP 286
           MGDTGPCGPC+EI YD  G      L  +   D    IE+WNIVF+QFNR +DG+++ LP
Sbjct: 172 MGDTGPCGPCTEIFYDH-GETFWGGLPGSPEEDGDRYIEVWNIVFMQFNRLADGTMEKLP 230

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
              VDTG+G ER+T+++Q+  SNY+TD+F  +   +         +G +   D D  + +
Sbjct: 231 KPSVDTGMGLERMTAVMQHVNSNYETDIFQTLIKEV---------AGLLNVSDLD--NKS 279

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            RVVADHIR  S+ IADG  P NEGR YVLRRI+RRAVR+G+ +L A++ FF  LV  + 
Sbjct: 280 LRVVADHIRACSYLIADGVVPSNEGRGYVLRRIIRRAVRHGN-LLGAKEAFFYKLVPTLA 338

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
            VMG     L Q++AHI++ + AEE  F +TL +G+   + A   V+   LSG+ AF L+
Sbjct: 339 TVMGHAGEVLTQKQAHIQKTLKAEEEQFARTLERGLALLEDALTKVENNTLSGEVAFKLY 398

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFPLDLT  +  ER L +D  GF   M   RER++++ N                  
Sbjct: 399 DTYGFPLDLTADVCRERELTIDEAGFEAEMTAQRERAKASSN--------------FGTD 444

Query: 527 KRGVLATDDSFKFIWFQD--HKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
              V+  +    FI + +   ++ I  +++  + ++++  G    I+L  + FYAE GGQ
Sbjct: 445 YNNVIKVEGQTDFIGYDNLEAQATIVGLFSNGKAVDTIQSGESAVIILDQTPFYAEMGGQ 504

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           + D G I     +F V + Q YG    HIG LT G+   S+G++V   VD  RR  I  N
Sbjct: 505 VGDSGLISTGICNFAVNDTQKYGQVFGHIGQLTSGS--LSIGDKVTATVDATRRVAITAN 562

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ ALREVLGDHV QKGS+V    LRFDFS  + +    L  IE IVN +I+  
Sbjct: 563 HSATHLLHSALREVLGDHVAQKGSLVSENILRFDFSQPEAISKSQLEEIERIVNRKIREN 622

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
           + V  +   +  AK   G  A+FGE Y D VRVV +                   S ELC
Sbjct: 623 IQVTIETMDIESAKK-KGAMALFGEKYGDVVRVVGM----------------TEFSIELC 665

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKI--- 821
           GGTH+  T +   F L+SE  +A GIRR+ AVT   A  A E   + +K +  +++    
Sbjct: 666 GGTHVQRTGDIGLFKLVSEGAVAAGIRRVEAVT---AETAIEWLHNQQKVLQQSAEFLKA 722

Query: 822 -EGSLLEKNQVRKAQKKVAEENLQK-----AVKVATETAEAAAS-NGKPFCISRVEVGLD 874
              SL+EK Q  + + K  E+ LQ+     A +  +E  + A   NG    + ++E  ++
Sbjct: 723 DSNSLVEKIQQLQDKAKRTEKELQQLKDKLAAQAGSELVKQANKINGVNVVVQKLE-NVE 781

Query: 875 AAAVREAVLKVIEQKGMPVMVFST--DETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQ 932
             ++R  V  +  Q    ++VF T  DE  N   +  GV +  D S ++   E + A  Q
Sbjct: 782 VKSLRTMVDDLKNQLESAIVVFGTVADEKVN---LIVGVTK--DLSSKVNAGELVGAMAQ 836

Query: 933 PLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
            + G+ G G+  +A   G++   +  A+  A E+   KL
Sbjct: 837 QVGGKGG-GRADMAMAGGSEPQNLDNALKFAEEWIQAKL 874


>gi|147675089|ref|YP_001216045.1| alanyl-tRNA synthetase [Vibrio cholerae O395]
 gi|227116921|ref|YP_002818817.1| alanyl-tRNA synthetase [Vibrio cholerae O395]
 gi|229520840|ref|ZP_04410262.1| alanyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
 gi|262169855|ref|ZP_06037545.1| alanyl-tRNA synthetase [Vibrio cholerae RC27]
 gi|421353359|ref|ZP_15803692.1| alanyl-tRNA synthetase [Vibrio cholerae HE-45]
 gi|424589796|ref|ZP_18029243.1| alanyl-tRNA synthetase [Vibrio cholerae CP1037(10)]
 gi|205830284|sp|A5F9B7.1|SYA_VIBC3 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|146316972|gb|ABQ21511.1| alanyl-tRNA synthetase [Vibrio cholerae O395]
 gi|227012371|gb|ACP08581.1| alanyl-tRNA synthetase [Vibrio cholerae O395]
 gi|229342073|gb|EEO07069.1| alanyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
 gi|262021589|gb|EEY40300.1| alanyl-tRNA synthetase [Vibrio cholerae RC27]
 gi|395954706|gb|EJH65315.1| alanyl-tRNA synthetase [Vibrio cholerae HE-45]
 gi|408036485|gb|EKG72915.1| alanyl-tRNA synthetase [Vibrio cholerae CP1037(10)]
          Length = 860

 Score =  590 bits (1521), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 359/922 (38%), Positives = 515/922 (55%), Gaps = 80/922 (8%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR  F  FFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI++AWE LT V +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           P +RL  T +          D+EA DIW K   +PA R++  G K        DNFW+MG
Sbjct: 122 PKERLLVTVY--------ETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKH 289
           DTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG+++PLP   
Sbjct: 174 DTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPS 233

Query: 290 VDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRV 349
           VDTG+G ER+++I+Q   SNY+ DVF  +  A   A G +           D  + + RV
Sbjct: 234 VDTGMGIERISAIMQGVHSNYEIDVFQTLIKAAADAIGYQ-----------DLTNQSLRV 282

Query: 350 VADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVM 409
           VADHIR+ +F I DG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF+ LV  + +VM
Sbjct: 283 VADHIRSCAFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGAFFHKLVGPLAEVM 341

Query: 410 GDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTY 469
           G    ELK+++A + +++  EE +FG+TL +G+     A   + G+VL G+  F L+DTY
Sbjct: 342 GTAGVELKKQQALVEKVLRIEEENFGRTLDRGMSILNDALDQLSGQVLDGETVFKLYDTY 401

Query: 470 GFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRG 529
           GFP DLT  +A ERG  +D  GF  AM+E R+R+R A      G    D +   +L K  
Sbjct: 402 GFPADLTNDVARERGFSIDEAGFEQAMEEQRQRAREA------GQFGTDYN---SLIKS- 451

Query: 530 VLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEG 589
             AT+  F        +SV++ ++     + ++  G++  IVL ++ FYAE GGQ  D G
Sbjct: 452 --ATNTEFCGYTASRGQSVVREMFVEGAEVSTLSAGDKAIIVLDNTPFYAESGGQCGDTG 509

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
            ++   G F+V + Q  G  + H G L +G    + G++V   VD  RR  I+ NH+ TH
Sbjct: 510 VLKTDAGIFHVEDTQKLGNAIAHHGVLAQGV--LATGDQVDAIVDEKRRAAISLNHSATH 567

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +L+ ALR+VLG+HV QKGS+V  E LRFDFSH + +    ++ +E +VN++++    + +
Sbjct: 568 LLHAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTAAEIKEVERLVNQEVRRNHSIET 627

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
               + EAK   G  A+FGE Y D VRV+++G                  S ELCGG H 
Sbjct: 628 NIMNIDEAKA-KGAMALFGEKYDDQVRVLSMG----------------DFSTELCGGIHA 670

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKN 829
           SNT +   F ++SE GIA GIRRI AVT   A    +A  +           +  LLEK 
Sbjct: 671 SNTGDIGLFKIISEGGIAAGIRRIEAVTGEGALDYLDAQQAQHDAKVSEMAAKAKLLEK- 729

Query: 830 QVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQK 889
           ++++ + K+A +     +    + A      G    ++++  G D  A+R  V  +  Q 
Sbjct: 730 EIQQLKDKLAAKESAGLINQVKQIA------GVNVLVAQLN-GADNKALRGMVDDLKNQL 782

Query: 890 GMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQ 949
              +++   +    K  + AGV   +D + +++  E +      + G+ G G+  +A   
Sbjct: 783 SSGIIMLG-NVAEGKVGLIAGVT--NDLTNKVKAGELVNMVALQVGGK-GGGRPDMAQAG 838

Query: 950 GTDAAQVTPAMDLAAEFAAMKL 971
           GTDA  +  A++    + A +L
Sbjct: 839 GTDAHALPSALESVDAWIAERL 860


>gi|303253696|ref|ZP_07339833.1| alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|307247624|ref|ZP_07529667.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
 gi|302647421|gb|EFL77640.1| alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|306855894|gb|EFM88054.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
          Length = 874

 Score =  590 bits (1521), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 362/939 (38%), Positives = 515/939 (54%), Gaps = 97/939 (10%)

Query: 61  TKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLT 120
           +++R +F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG      +    T
Sbjct: 5   SEIRQSFLDFFHSKGHTVVPSSSLVPENDPTLLFTNAGMNQFKDVFLGL-----EKRPYT 59

Query: 121 RACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KV 178
           RA   Q+C+RAGGKHNDL++VG    HHTFFEM+GN+SFGDYFK++AI++ WE LT  + 
Sbjct: 60  RATTAQRCVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKHDAIQFGWEYLTSPQW 119

Query: 179 YRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFWE 229
             LP ++LY T +          D+EA DIW K +  P   ++  G         DNFW 
Sbjct: 120 LGLPKEKLYVTVY--------ETDDEAYDIWNKIVGVPTDHIIRIGDNKGAPYASDNFWA 171

Query: 230 MGDTGPCGPCSEIHYDRTGNRDAASLVNN---DDPTCIEIWNIVFIQFNRESDGSLKPLP 286
           MGDTGPCGPC+EI YD  G      L  +   D    IE+WNIVF+QFNR +DG+++ LP
Sbjct: 172 MGDTGPCGPCTEIFYDH-GETFWGGLPGSPEEDGDRYIEVWNIVFMQFNRLADGTMEKLP 230

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
              VDTG+G ER+T+++Q+  SNY+TD+F  +   +         +G +   D D  + +
Sbjct: 231 KPSVDTGMGLERMTAVMQHVNSNYETDIFQTLIKEV---------AGLLNVSDLD--NKS 279

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            RVVADHIR  S+ IADG  P NEGR YVLRRI+RRAVR+G+ +L A++ FF  LV  + 
Sbjct: 280 LRVVADHIRACSYLIADGVVPSNEGRGYVLRRIIRRAVRHGN-LLGAKEAFFYKLVPTLA 338

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
            VMG     L Q++AHI++ + AEE  F +TL +G+   + A   V+   LSG+ AF L+
Sbjct: 339 TVMGHAGEVLTQKQAHIQKTLKAEEEQFARTLERGLALLEDALTKVENNTLSGEVAFKLY 398

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFPLDLT  +  ER L +D  GF   M   RER++++ N                  
Sbjct: 399 DTYGFPLDLTADVCRERELTIDEAGFEAEMTAQRERAKASSN--------------FGTD 444

Query: 527 KRGVLATDDSFKFIWFQD--HKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
              V+  +    FI + +   ++ I  +++  + ++++  G    I+L  + FYAE GGQ
Sbjct: 445 YNNVIKVEGQTDFIGYDNLEAQATIVGLFSNGKAVDTIQSGESAVIILDQTPFYAEMGGQ 504

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           + D G I     +F V + Q YG    HIG LT G+   S+G++V   VD  RR  I  N
Sbjct: 505 VGDSGLISTEICNFAVNDTQKYGQVFGHIGQLTSGS--LSIGDKVTATVDATRRVAITAN 562

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ ALREVLGDHV QKGS+V    LRFDFS  + +    L  IE IVN +I+  
Sbjct: 563 HSATHLLHSALREVLGDHVAQKGSLVSENILRFDFSQPEAISKSQLEEIERIVNRKIREN 622

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
           + V  +   +  AK   G  A+FGE Y D VRVV +                   S ELC
Sbjct: 623 IQVTIETMDIESAKK-KGAMALFGEKYGDVVRVVGM----------------TEFSIELC 665

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKI--- 821
           GGTH+  T +   F L+SE  +A GIRR+ AVT   A  A E   + +K +  +++    
Sbjct: 666 GGTHVQRTGDIGLFKLVSEGAVAAGIRRVEAVT---AETAIEWLHNQQKVLQQSAEFLKA 722

Query: 822 -EGSLLEKNQVRKAQKKVAEENLQK-----AVKVATETAEAAAS-NGKPFCISRVEVGLD 874
              SL+EK Q  + + K  E+ LQ+     A +  +E  + A   NG    + ++E  ++
Sbjct: 723 DSNSLVEKIQQLQDKAKRTEKELQQLKDKLAAQAGSELVKQANKINGVNVVVQKLE-NVE 781

Query: 875 AAAVREAVLKVIEQKGMPVMVFST--DETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQ 932
             ++R  V  +  Q    ++VF T  DE  N   +  GV +  D S ++   E + A  Q
Sbjct: 782 VKSLRTMVDDLKNQLESAIVVFGTVADEKVN---LIVGVTK--DLSSKVNAGELVGAMAQ 836

Query: 933 PLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
            + G+ G G+  +A   G++   +  A+  A E+   KL
Sbjct: 837 QVGGKGG-GRADMAMAGGSEPQNLDNALKFAEEWIQAKL 874


>gi|256841698|ref|ZP_05547204.1| alanyl-tRNA synthetase [Parabacteroides sp. D13]
 gi|256736592|gb|EEU49920.1| alanyl-tRNA synthetase [Parabacteroides sp. D13]
          Length = 873

 Score =  590 bits (1521), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 347/820 (42%), Positives = 471/820 (57%), Gaps = 73/820 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R++F +FF  K H    S+P+V   DPTL+F NAGMNQ+K I LG         K 
Sbjct: 4   AKEIRESFKQFFASKEHQIVPSAPMVVKGDPTLMFTNAGMNQFKDIILGNVP-----RKY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWE L +V 
Sbjct: 59  PRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAINWAWEYLVEVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +L  +RLYAT F G    GL  DNEA   W ++LP   +L     DNFWEMGDTGPCGPC
Sbjct: 119 KLNPERLYATVFEGSPAEGLDRDNEAAGYWEQYLPKDHILNGNKHDNFWEMGDTGPCGPC 178

Query: 240 SEIHYDRTGNRD-----AASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D   + +      A +VN D P  IEIWN+VF+QFNR++DGSL+PLPAK +DTG+
Sbjct: 179 SEIHIDLRSDEERAAVSGADMVNKDHPQVIEIWNLVFMQFNRKADGSLEPLPAKVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF PI   I    G        G D   + D+A RV+ADHI
Sbjct: 239 GFERLCMALQGKTSNYDTDVFQPIIKVIAGMAGT-----TYGTD--KQQDIAMRVIADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++FAI DG  P N    YV+RRILRRAVRYG   L  ++ F   L+ ++++ MGD +P
Sbjct: 292 RTIAFAITDGQLPSNAKAGYVIRRILRRAVRYGYTFLDRKEAFMYKLLPVLIETMGDAYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ--GK-VLSGQDAFILWDTYGF 471
           EL  ++  I ++I  EE SF +TL  GI    K  ++ +  GK VL+G DAF L+DTYGF
Sbjct: 352 ELIAQKTLIEKVIKEEEESFLRTLETGIRLLDKKMEETKAAGKTVLNGVDAFTLYDTYGF 411

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E G+  DIE FN AM + +ER+R+A   + G  I +       +   G  
Sbjct: 412 PLDLTELILRENGMEADIEAFNKAMQKQKERARNAAAIETGDWITLKEGECKFV---GYD 468

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
             +   + + ++  K   K +Y                IVL  + FYAE GGQ+ D G++
Sbjct: 469 LFECEAEILRYRQIKQKNKVLYQ---------------IVLDQTPFYAEMGGQVGDTGWL 513

Query: 592 EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHML 651
                   V + +      +H+ +         V      K++  +R     NH+ TH+L
Sbjct: 514 IADDEKIDVIDTKRENNLPVHLVTKLPK----DVTATFTAKINVKKRIQCECNHSATHLL 569

Query: 652 NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS-K 710
           + ALREVLG HV+QKGS V P+ LRFDFSH + V  E +R++E +V E+I+A   +   +
Sbjct: 570 HEALREVLGTHVEQKGSYVSPDSLRFDFSHFQKVTDEEIRKVEILVGEKIRANFPLEEHR 629

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
              +AEAK + G  A+FGE Y D VRVV  G                  S ELCGGTH+ 
Sbjct: 630 NMPIAEAKAL-GAMALFGEKYGDEVRVVKYGS-----------------SVELCGGTHIP 671

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV--------DDASKIE 822
            T    +  ++ E  IA G+RRI AVT   A +   A   L +E+        + A  ++
Sbjct: 672 ATGMIGSLHVIGESSIAAGVRRIEAVTAEGAEQFVYAQQDLIRELRALMNHMPNLAQAMK 731

Query: 823 GSLLEKNQVRKAQKKVAEENLQKAVKVATE-TAEAAASNG 861
            S+ E  +++   K++ +   +K++++  E  A+A+ SNG
Sbjct: 732 KSIEENAEMK---KQIEDYIREKSMRLKEEIVAKASESNG 768


>gi|398859207|ref|ZP_10614887.1| alanine--tRNA ligase [Pseudomonas sp. GM79]
 gi|398237348|gb|EJN23101.1| alanine--tRNA ligase [Pseudomonas sp. GM79]
          Length = 873

 Score =  590 bits (1521), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 357/893 (39%), Positives = 507/893 (56%), Gaps = 90/893 (10%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F +FFE++ H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLRFFEEQGHTRVASSSLIPGNDPTLLFTNAGMNQFKDCFLGQ-----EKRAY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           TRA ++QKC+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AW  LT  K
Sbjct: 58  TRAVSSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAITYAWNFLTSEK 117

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFW 228
              LP ++L+ T +        A D+EA DIW K +  PA R++  G         DNFW
Sbjct: 118 WLNLPKEKLWVTVY--------ASDDEAYDIWTKDIGVPAERMVRIGDNKGAPYASDNFW 169

Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
            MGDTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG L PLP
Sbjct: 170 TMGDTGPCGPCTEIFYDHGADIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLP 229

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
           A  VDTG+G ER++++LQ+  SNY+ D+F  +  A  +A G             +    +
Sbjct: 230 APSVDTGMGLERISAVLQHVHSNYEIDLFQSLLIASAKAIGC-----------TNDAQAS 278

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            +VVADHIR+  F IADG  P NEGR YVLRRI+RRA R+G++ L A+  FF  +V  +V
Sbjct: 279 LKVVADHIRSCGFLIADGVLPSNEGRGYVLRRIIRRACRHGNK-LGAKGSFFYQIVAALV 337

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
             MG+ FPELK ++AHI  ++ AEE  F KTL +G++  ++   +++G V+ G   F L+
Sbjct: 338 AEMGEAFPELKSQQAHIERVLKAEEEQFAKTLEQGLKILEQDLAELKGDVVPGDVVFKLY 397

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFP+DLT  +A ER L +D EGF   M+  R R+RSA       +  MD ++     
Sbjct: 398 DTYGFPMDLTGDIARERSLTIDEEGFEREMEAQRVRARSAS------SFGMDYNS----- 446

Query: 527 KRGVLATDDSFKFIWFQDHKSVIK--AIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
              ++  D + +F  +  H    K  A+Y   + ++ +  G E  +VL  + FYAE GGQ
Sbjct: 447 ---LVKVDVATEFTGYTAHSGSAKIVALYKDGQSVDVLSEGEEGVVVLNQTPFYAESGGQ 503

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           I D GF++     F VR+    GG  +H G L  G+    VG  V   VD D R   + N
Sbjct: 504 IGDCGFLQAGAARFDVRDTTKTGGAFLHHGVLDSGS--LIVGAPVETHVDADVRHATSLN 561

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ ALR+VLG+HV QKGS+V  ++LRFDFSH + + PE L+ +E IVN +I+  
Sbjct: 562 HSATHLLHAALRQVLGEHVQQKGSLVDSQRLRFDFSHFEAIKPEQLKALEDIVNAEIRKN 621

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
            +V ++E  +  AK   G  A+FGE Y D VRV+++G                  S ELC
Sbjct: 622 SEVETEETDIETAKQ-KGAMALFGEKYGDSVRVLSMG----------------DFSVELC 664

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVT--TGLAY------KAFEAACSLEKEVD 816
           GG H + T +     ++SE G+A G+RRI A+T    LAY      +  EAA  ++   D
Sbjct: 665 GGIHATRTGDIGLLKIISEGGVASGVRRIEALTGAAALAYLNTAEEQLKEAANLVKGSRD 724

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQ-KAVKVATETAEAAASNGKPFCISRVEV-GLD 874
           +      ++LE+N++ + Q     E LQ KA   A +   A+A + K   +  V + G D
Sbjct: 725 NLIDKLSAVLERNRLLEKQL----EQLQAKAASAAGDDLSASALDVKGVKVLAVRLDGQD 780

Query: 875 AAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWL 927
             A+   V ++  + G  V++  +     K V+ AGV +  D + QL+  + +
Sbjct: 781 GKALLALVDQLKNKLGRAVILLGSVH-EEKVVLVAGVTK--DLTGQLKAGDLM 830


>gi|436608292|ref|ZP_20513605.1| alanyl-tRNA synthetase, partial [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 22704]
 gi|434970472|gb|ELL63058.1| alanyl-tRNA synthetase, partial [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 22704]
          Length = 863

 Score =  590 bits (1520), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 353/908 (38%), Positives = 510/908 (56%), Gaps = 91/908 (10%)

Query: 70  FFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRACNTQKCI 129
           FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +RA  +Q+C+
Sbjct: 2   FFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSRATTSQRCV 56

Query: 130 RAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVYRLPADRLY 187
           RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT    + LP +RL+
Sbjct: 57  RAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALPKERLW 116

Query: 188 ATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEMGDTGPCGP 238
            T +          D+EA +IW K   +P  R++  G         DNFW+MGDTGPCGP
Sbjct: 117 VTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGP 168

Query: 239 CSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGF 296
           C+EI YD   +           D    IEIWNIVF+QFNR+++G+++PLP   VDTG+G 
Sbjct: 169 CTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQAEGTMEPLPKPSVDTGMGL 228

Query: 297 ERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRT 356
           ER+ ++LQ+  SNYD D+F  + +A+ + TGA     K           + RV+ADHIR+
Sbjct: 229 ERIAAVLQHVNSNYDIDLFRTLIEAVAKVTGATDLGNK-----------SLRVIADHIRS 277

Query: 357 LSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPEL 416
            +F +ADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  +++VMG    EL
Sbjct: 278 CAFLVADGVLPSNENRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVGPLIEVMGSAGEEL 336

Query: 417 KQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLT 476
           K+++A + +++  EE  F +TL +G+    +    +QG  L G+ AF L+DTYGFP+DLT
Sbjct: 337 KRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLQGDTLDGETAFRLYDTYGFPVDLT 396

Query: 477 QLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDS 536
             +  ER + VD  GF  AM+E R R+R A            AD  A      ++  D +
Sbjct: 397 ADVCRERNIKVDEAGFEAAMEEQRRRAREASG--------FGADYNA------MIRVDSA 442

Query: 537 FKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEG 593
            +F  + DH  +   + A++   + +E++  G E  +VL  + FYAE GGQ+ D+G ++G
Sbjct: 443 SEFKGY-DHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPFYAESGGQVGDKGELKG 501

Query: 594 LFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNF 653
              +F V + Q YG  + H+G L+ GA    VG+ V   VD  RR  I  NH+ TH+++ 
Sbjct: 502 AGFTFAVDDTQKYGQAIGHLGKLSAGA--LKVGDAVQADVDEARRARIRLNHSATHLMHA 559

Query: 654 ALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEAT 713
           ALR+VLG HV QKGS+V  + LRFDFSH + + P  +R +E +VN QI+  L + +    
Sbjct: 560 ALRQVLGTHVAQKGSLVSDKVLRFDFSHNEAMKPSEIREVEDLVNAQIRRNLPIETNIMD 619

Query: 714 LAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTR 773
           L  AK   G  A+FGE Y + VRV+++G                  S ELCGGTH S T 
Sbjct: 620 LDAAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCGGTHASRTG 662

Query: 774 EAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------DDASKIEGS 824
           +   F ++SE G A GIRRI AVT   A     A      ++         +   K+   
Sbjct: 663 DIGLFRIISESGTAAGIRRIEAVTGEGAMATVHAQSDRLNDIAHLLKGDSQNLGDKVRAV 722

Query: 825 LLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLK 884
           L    Q+ K  +++ ++    A + A  +++A   NG    +S +  G++   +R  V  
Sbjct: 723 LERTRQLEKELQQLKDQ--AAAQESANLSSKAVDLNGVKLLVSEL-AGIEPKMLRTMVDD 779

Query: 885 VIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGG 944
           +  Q G  V+V +T     K  + AGV +  D + +++  E +    Q + G+ G G+  
Sbjct: 780 LKNQLGSTVIVLAT-VVEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGGKGG-GRPD 835

Query: 945 LASGQGTD 952
           +A   GTD
Sbjct: 836 MAQAGGTD 843


>gi|423216877|ref|ZP_17203373.1| alanyl-tRNA synthetase [Bacteroides caccae CL03T12C61]
 gi|392629407|gb|EIY23414.1| alanyl-tRNA synthetase [Bacteroides caccae CL03T12C61]
          Length = 872

 Score =  590 bits (1520), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 327/747 (43%), Positives = 445/747 (59%), Gaps = 61/747 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++RD+F  FFE K H    S+P+V  +DPTL+F NAGMNQ+K I LG        +K 
Sbjct: 4   AKEIRDSFKNFFESKGHHIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGN-----HPAKY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWE L +V 
Sbjct: 59  QRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAINWAWEYLVEVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +L  + LYAT F G  + GL+ D+EA   W +FLP   ++     DNFWEMGDTGPCGPC
Sbjct: 119 KLNPEHLYATVFEGSPEEGLSRDDEAASYWEQFLPKDHIINGNKHDNFWEMGDTGPCGPC 178

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + A      LVN+D P  IEIWN+VF+Q+NR++D SL+PLPAK +DTG+
Sbjct: 179 SEIHIDLRPAEERAKISGRDLVNHDHPQVIEIWNLVFMQYNRKADSSLEPLPAKVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF P+  AI   +G      + G D   + D+A RV+ADHI
Sbjct: 239 GFERLCMALQGKTSNYDTDVFQPMLKAIAVMSGT-----EYGKD--KQQDIAMRVIADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++F+I DG  P N    YV+RRILRRAVRYG   L  +  F   L+ +++  MGD +P
Sbjct: 292 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLIDNMGDAYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ--GKV-LSGQDAFILWDTYGF 471
           EL  ++  I ++I  EE +F +TL  GI    K  +D +  GK  +SG+DAF L+DT+GF
Sbjct: 352 ELIAQKTLIEKVIKEEEEAFLRTLETGIRLLDKTMEDTKAAGKTEISGKDAFTLYDTFGF 411

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E G+ V++E FN  M + ++R+R+A   + G  I +    T  +   G  
Sbjct: 412 PLDLTELILRENGMTVNLEEFNAEMQQQKQRARNAAAIETGDWITLKEGTTEFV---GYD 468

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            T+     + ++  K   + +Y                IVL  + FYAE GGQ+ D G +
Sbjct: 469 YTEYEASILRYRQIKQKNQTLYQ---------------IVLDYTPFYAESGGQVGDTGVL 513

Query: 592 EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHML 651
              F +  V + +      IHI   T+          + C V+ D+R   A NH+ TH+L
Sbjct: 514 VSEFETIEVIDTKKENNLPIHI---TKKLPEHPEAPFMAC-VNTDKRAACAANHSATHLL 569

Query: 652 NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS-K 710
           + ALREVLG+H++QKGS+V P+ LRFDFSH + V  E +R++E IVN +I+A + +   +
Sbjct: 570 DAALREVLGEHIEQKGSLVTPDSLRFDFSHFQKVTDEEIRQVEHIVNARIRANIPLKEYR 629

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
              + EAK +  + A+FGE Y D VRV+  G                  S E CGGTH++
Sbjct: 630 NIPIEEAKELGAI-ALFGEKYGDRVRVIQFGS-----------------SIEFCGGTHVA 671

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVT 797
            T       ++SE  +A G+RRI A T
Sbjct: 672 ATGNIGMVKIVSESSVAAGVRRIEAYT 698


>gi|190149963|ref|YP_001968488.1| alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|307263291|ref|ZP_07544909.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13
           str. N273]
 gi|205829969|sp|B3H177.1|SYA_ACTP7 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|189915094|gb|ACE61346.1| alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|306871353|gb|EFN03079.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13
           str. N273]
          Length = 874

 Score =  590 bits (1520), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 365/939 (38%), Positives = 518/939 (55%), Gaps = 97/939 (10%)

Query: 61  TKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLT 120
           +++R +F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG      +    T
Sbjct: 5   SEIRQSFLDFFHSKGHTVVPSSSLVPENDPTLLFTNAGMNQFKDVFLGL-----EKRPYT 59

Query: 121 RACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KV 178
           RA   Q+C+RAGGKHNDL++VG    HHTFFEM+GN+SFGDYFK++AI++ WE LT  + 
Sbjct: 60  RATTAQRCVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKHDAIQFGWEYLTSPQW 119

Query: 179 YRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFWE 229
             LP ++LY T +          D+EA DIW K +  P   ++  G         DNFW 
Sbjct: 120 LGLPKEKLYVTVY--------ETDDEAYDIWNKIVGVPTDHIIRIGDNKGAPYASDNFWA 171

Query: 230 MGDTGPCGPCSEIHYDRTGNRDAASLVNN---DDPTCIEIWNIVFIQFNRESDGSLKPLP 286
           MGDTGPCGPC+EI YD  G      L  +   D    IE+WNIVF+QFNR +DG+++ LP
Sbjct: 172 MGDTGPCGPCTEIFYDH-GETFWGGLPGSPEEDGDRYIEVWNIVFMQFNRLADGTMEKLP 230

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
              VDTG+G ER+T+++Q+  SNY+TD+F  +   +         +G +   D D  + +
Sbjct: 231 KPSVDTGMGLERMTAVMQHVNSNYETDIFQTLIKEV---------AGLLNVTDLD--NKS 279

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            RVVADHIR  S+ IADG  P NEGR YVLRRI+RRAVR+G+ +L A++ FF  LV  + 
Sbjct: 280 LRVVADHIRACSYLIADGVVPSNEGRGYVLRRIIRRAVRHGN-LLGAKEAFFYKLVPTLA 338

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
            VMG     L Q++AHI++ + AEE  F +TL +G+   + A   V+   LSG+ AF L+
Sbjct: 339 TVMGHAGEVLTQKQAHIQKTLKAEEEQFARTLERGLALLEDALTKVENNTLSGEVAFKLY 398

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFPLDLT  +  ER + +D  GF   M   RER++++ N          AD    + 
Sbjct: 399 DTYGFPLDLTADVCREREITIDEAGFEAEMTAQRERAKASSN--------FGADYNNVIK 450

Query: 527 KRGVLATDDSFKFIWFQD--HKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
             G   TD    FI + +   ++ I  +++  + ++++  G    I+L  + FYAE GGQ
Sbjct: 451 VEG--QTD----FIGYDNLAAQATIVGLFSNGKAVDTIQSGESAVIILDQTPFYAEMGGQ 504

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           + D G I     +F V + Q YG    HIG LT G+   S+G++V   VD  RR  I  N
Sbjct: 505 VGDSGLISTEICNFAVNDTQKYGQVFGHIGQLTSGS--LSIGDKVTATVDATRRVAITAN 562

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ ALREVLGDHV QKGS+V    LRFDFS  + +    L  IE IVN +I+  
Sbjct: 563 HSATHLLHSALREVLGDHVAQKGSLVSENILRFDFSQPEAISKSQLEEIERIVNRKIREN 622

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
           + V  +   +  AK   G  A+FGE Y D VRVV +                   S ELC
Sbjct: 623 IQVTIETMDIESAKK-KGAMALFGEKYGDVVRVVGM----------------TEFSIELC 665

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKI--- 821
           GGTH+  T +   F L+SE  +A GIRR+ AVT   A  A E   + +K +  +++    
Sbjct: 666 GGTHVQRTGDIGLFKLVSEGAVAAGIRRVEAVT---AETAIEWLHNQQKVLQQSAEFLKA 722

Query: 822 -EGSLLEKNQVRKAQKKVAEENLQK-----AVKVATETAEAAAS-NGKPFCISRVEVGLD 874
              SL+EK Q  + + K  E+ LQ+     A +  +E  + A   NG    + ++E  ++
Sbjct: 723 DSNSLVEKIQQLQDKAKRTEKELQQLKDKLAAQAGSELVKQANKINGVNVVVQKLE-NVE 781

Query: 875 AAAVREAVLKVIEQKGMPVMVFST--DETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQ 932
             ++R  V  +  Q    ++VF T  DE  N   +  GV +  D S ++   E + A  Q
Sbjct: 782 VKSLRTMVDDLKNQLESAIVVFGTVADEKVN---LIVGVTK--DLSSKVNAGELVGAMAQ 836

Query: 933 PLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
            + G+ G G+  +A   G++   +  A+  A E+   KL
Sbjct: 837 QVGGKGG-GRADMAMAGGSEPQNLDNALKFAEEWIQAKL 874


>gi|303249632|ref|ZP_07335837.1| alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|307252204|ref|ZP_07534102.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|302651444|gb|EFL81595.1| alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306860348|gb|EFM92363.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
          Length = 874

 Score =  590 bits (1520), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 365/939 (38%), Positives = 518/939 (55%), Gaps = 97/939 (10%)

Query: 61  TKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLT 120
           +++R +F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG      +    T
Sbjct: 5   SEIRQSFLDFFHSKGHTVVPSSSLVPENDPTLLFTNAGMNQFKDVFLGL-----EKRPYT 59

Query: 121 RACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KV 178
           RA   Q+C+RAGGKHNDL++VG    HHTFFEM+GN+SFGDYFK++AI++ WE LT  + 
Sbjct: 60  RATTAQRCVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKHDAIQFGWEYLTSPQW 119

Query: 179 YRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFWE 229
             LP ++LY T +          D+EA DIW K +  P   ++  G         DNFW 
Sbjct: 120 LGLPKEKLYVTVY--------ETDDEAYDIWNKIVGVPTDHIIRIGDNKGAPYASDNFWA 171

Query: 230 MGDTGPCGPCSEIHYDRTGNRDAASLVNN---DDPTCIEIWNIVFIQFNRESDGSLKPLP 286
           MGDTGPCGPC+EI YD  G      L  +   D    IE+WNIVF+QFNR +DG+++ LP
Sbjct: 172 MGDTGPCGPCTEIFYDH-GETFWGGLPGSPEEDGDRYIEVWNIVFMQFNRLADGTMEKLP 230

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
              VDTG+G ER+T+++Q+  SNY+TD+F  +   +         +G +   D D  + +
Sbjct: 231 KPSVDTGMGLERMTAVMQHVNSNYETDIFQTLIKEV---------AGLLNVSDLD--NKS 279

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            RVVADHIR  S+ IADG  P NEGR YVLRRI+RRAVR+G+ +L A++ FF  LV  + 
Sbjct: 280 LRVVADHIRACSYLIADGVVPSNEGRGYVLRRIIRRAVRHGN-LLGAKEAFFYKLVPTLA 338

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
            VMG     L Q++AHI++ + AEE  F +TL +G+   + A   V+   LSG+ AF L+
Sbjct: 339 TVMGHAGEVLTQKQAHIQKTLKAEEEQFARTLERGLALLEDALTKVENNTLSGEVAFKLY 398

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFPLDLT  +  ER + +D  GF   M   RER++++ N          AD    + 
Sbjct: 399 DTYGFPLDLTADVCREREITIDEAGFEAEMTAQRERAKASSN--------FGADYNNVIK 450

Query: 527 KRGVLATDDSFKFIWFQD--HKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
             G   TD    FI + +   ++ I  +++  + ++++  G    I+L  + FYAE GGQ
Sbjct: 451 VEG--QTD----FIGYDNLAAQATIVGLFSNGKAVDTIQSGESAVIILDQTPFYAEMGGQ 504

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           + D G I     +F V + Q YG    HIG LT G+   S+G++V   VD  RR  I  N
Sbjct: 505 VGDSGLISTEICNFAVNDTQKYGQVFGHIGQLTSGS--LSIGDKVTATVDATRRVAITAN 562

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ ALREVLGDHV QKGS+V    LRFDFS  + +    L  IE IVN +I+  
Sbjct: 563 HSATHLLHSALREVLGDHVAQKGSLVSENILRFDFSQPEAISKSQLEEIERIVNRKIREN 622

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
           + V  +   +  AK   G  A+FGE Y D VRVV +                   S ELC
Sbjct: 623 IQVTIETMDIESAKK-KGAMALFGEKYGDVVRVVGM----------------TEFSIELC 665

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKI--- 821
           GGTH+  T +   F L+SE  +A GIRR+ AVT   A  A E   + +K +  +++    
Sbjct: 666 GGTHVQRTGDIGLFKLVSEGAVAAGIRRVEAVT---AETAIEWLHNQQKVLQQSAEFLKA 722

Query: 822 -EGSLLEKNQVRKAQKKVAEENLQK-----AVKVATETAEAAAS-NGKPFCISRVEVGLD 874
              SL+EK Q  + + K  E+ LQ+     A +  +E  + A   NG    + ++E  ++
Sbjct: 723 DSNSLVEKIQQLQDKAKRTEKELQQLKDKLAAQAGSELVKQANKINGVNVVVQKLE-NVE 781

Query: 875 AAAVREAVLKVIEQKGMPVMVFST--DETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQ 932
             ++R  V  +  Q    ++VF T  DE  N   +  GV +  D S ++   E + A  Q
Sbjct: 782 VKSLRTMVDDLKNQLESAIVVFGTVADEKVN---LIVGVTK--DLSSKVNAGELVGAMAQ 836

Query: 933 PLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
            + G+ G G+  +A   G++   +  A+  A E+   KL
Sbjct: 837 QVGGKGG-GRADMAMAGGSEPQNLDNALKFAEEWIQAKL 874


>gi|53729167|ref|ZP_00134001.2| COG0013: Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|126208134|ref|YP_001053359.1| alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 5b
           str. L20]
 gi|205829968|sp|A3N018.1|SYA_ACTP2 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|126096926|gb|ABN73754.1| alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 5b
           str. L20]
          Length = 874

 Score =  590 bits (1520), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 362/939 (38%), Positives = 515/939 (54%), Gaps = 97/939 (10%)

Query: 61  TKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLT 120
           +++R +F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG      +    T
Sbjct: 5   SEIRQSFLDFFHSKGHTVVPSSSLVPENDPTLLFTNAGMNQFKDVFLGL-----EKRPYT 59

Query: 121 RACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KV 178
           RA   Q+C+RAGGKHNDL++VG    HHTFFEM+GN+SFGDYFK++AI++ WE LT  + 
Sbjct: 60  RATTAQRCVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKHDAIQFGWEYLTSPQW 119

Query: 179 YRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFWE 229
             LP ++LY T +          D+EA DIW K +  P   ++  G         DNFW 
Sbjct: 120 LGLPKEKLYVTVY--------ETDDEAYDIWNKIVGVPTDHIIRIGDNKGAPYASDNFWA 171

Query: 230 MGDTGPCGPCSEIHYDRTGNRDAASLVNN---DDPTCIEIWNIVFIQFNRESDGSLKPLP 286
           MGDTGPCGPC+EI YD  G      L  +   D    IE+WNIVF+QFNR +DG+++ LP
Sbjct: 172 MGDTGPCGPCTEIFYDH-GETFWGGLPGSPEEDGDRYIEVWNIVFMQFNRLADGTMEKLP 230

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
              VDTG+G ER+T+++Q+  SNY+TD+F  +   +         +G +   D D  + +
Sbjct: 231 KPSVDTGMGLERMTAVMQHVNSNYETDIFQTLIKEV---------AGLLNVSDLD--NKS 279

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            RVVADHIR  S+ IADG  P NEGR YVLRRI+RRAVR+G+ +L A++ FF  LV  + 
Sbjct: 280 LRVVADHIRACSYLIADGVVPSNEGRGYVLRRIIRRAVRHGN-LLGAKEAFFYKLVPTLA 338

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
            VMG     L Q++AHI++ + AEE  F +TL +G+   + A   V+   LSG+ AF L+
Sbjct: 339 TVMGHAGEVLTQKQAHIQKTLKAEEEQFARTLERGLALLEDALTKVENNTLSGEVAFKLY 398

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFPLDLT  +  ER L +D  GF   M   RER++++ N                  
Sbjct: 399 DTYGFPLDLTADVCRERELTIDEAGFEAEMTAQRERAKASSN--------------FGTD 444

Query: 527 KRGVLATDDSFKFIWFQD--HKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
              V+  +    FI + +   ++ I  +++  + ++++  G    I+L  +SFYAE GGQ
Sbjct: 445 YNNVIKVEGQTDFIGYDNLEAQATIVGLFSNGKAVDTIQSGESAVIILDQTSFYAEMGGQ 504

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           + D G I     +F V + Q YG    HIG LT G+   S+G++V   V   RR  I  N
Sbjct: 505 VGDSGLISTEICNFAVNDTQKYGQVFGHIGQLTSGS--LSIGDKVTATVHATRRIAITAN 562

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ ALREVLGDHV QKGS+V    LRFDFS  + +    L  IE IVN +I+  
Sbjct: 563 HSATHLLHSALREVLGDHVAQKGSLVSENILRFDFSQPEAISKSQLEEIERIVNRKIREN 622

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
           + V  +   +  AK   G  A+FGE Y D VRVV +                   S ELC
Sbjct: 623 IQVTIETMDIESAKK-KGAMALFGEKYGDVVRVVGM----------------TEFSIELC 665

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKI--- 821
           GGTH+  T +   F L+SE  +A GIRR+ AVT   A  A E   + +K +  +++    
Sbjct: 666 GGTHVQRTGDIGLFKLVSEGAVAAGIRRVEAVT---AETAIEWLHNQQKVLQQSAEFLKA 722

Query: 822 -EGSLLEKNQVRKAQKKVAEENLQK-----AVKVATETAEAAAS-NGKPFCISRVEVGLD 874
              SL+EK Q  + + K  E+ LQ+     A +  +E  + A   NG    + ++E  ++
Sbjct: 723 DSNSLVEKIQQLQDKAKRTEKELQQLKDKLAAQAGSELVKQANKINGVNVVVQKLE-NVE 781

Query: 875 AAAVREAVLKVIEQKGMPVMVFST--DETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQ 932
             ++R  V  +  Q    ++VF T  DE  N   +  GV +  D S ++   E + A  Q
Sbjct: 782 VKSLRTMVDDLKNQLESAIVVFGTVADEKVN---LIVGVTK--DLSSKVNAGELVGAMAQ 836

Query: 933 PLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
            + G+ G G+  +A   G++   +  A+  A E+   KL
Sbjct: 837 QVGGKGG-GRADMAMAGGSEPQNLDNALKFAEEWIQAKL 874


>gi|260599084|ref|YP_003211655.1| alanyl-tRNA synthetase [Cronobacter turicensis z3032]
 gi|260218261|emb|CBA33198.1| Alanyl-tRNA synthetase [Cronobacter turicensis z3032]
          Length = 875

 Score =  590 bits (1520), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 365/930 (39%), Positives = 518/930 (55%), Gaps = 81/930 (8%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  + +
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQYAWELLTGAQWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP DRL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 NLPKDRLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNY+ D+F  +  A+   TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYEIDLFQKLIKAVANVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRA+R+G+ +L A+D FF  LV  +V V
Sbjct: 283 VIADHIRSCAFLIADGVIPSNENRGYVLRRIIRRAIRHGN-MLGAKDTFFYKLVGPLVDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    ELK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGSAGDELKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLTGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R +            AD  A +   
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSG--------FGADYNAMIRVD 453

Query: 529 GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDE 588
           G       FK     +  + + A++   + +E V  G +  +VL  + FYAE GGQ+ D+
Sbjct: 454 GA----SEFKGYDQTELTARVTALFIDGKSVEQVAAGQQAVVVLDETPFYAESGGQVGDK 509

Query: 589 GFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
           G ++G   +F V + Q YG  + HIG LT G     VGE V  +VD  RR+ I  NH+ T
Sbjct: 510 GELKGNGFTFTVNDTQKYGQAIGHIGELTSGV--LKVGEGVKAEVDQARRERIRLNHSAT 567

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R++E +VN QI+  L + 
Sbjct: 568 HLMHAALRQVLGTHVAQKGSLVNDKGLRFDFSHFEAMKPEEIRKVEDLVNAQIRRNLPIE 627

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
           +    L  AK   G  A+FGE Y D VRV+++G                  S ELCGG H
Sbjct: 628 TNVMDLEAAKA-KGAMALFGEKYEDRVRVLSMG----------------DFSTELCGGIH 670

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEK 828
            S T +   F ++SE G A G+RRI AVT   A     A      E+    K +   L  
Sbjct: 671 ASRTGDIGLFRIVSESGTAAGVRRIEAVTGEGALSLVHAQNDRLNELSHLLKSDSQTLND 730

Query: 829 N------QVRKAQKKVAEENLQKAVK-VATETAEAAASNGKPFCISRVEVGLDAAAVREA 881
                  + R+ +K++ +   Q+A +  A  +++A   NG    +S +  G++   +R  
Sbjct: 731 KVRAMVERTRQLEKELQQLKEQQAAQESANLSSKAIDINGVKLLVSEL-AGVEPKMLRTM 789

Query: 882 VLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKG 941
           V  +  Q G  V+V +T     K  + AGV +  D +++++  E +    Q + G+ G G
Sbjct: 790 VDDLKNQLGSSVIVLAT-VAEGKVSLIAGVSK--DVTERVKAGELVGMIAQQVGGKGG-G 845

Query: 942 KGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           +  +A   GTDAA +  A+     +   KL
Sbjct: 846 RPDMAQAGGTDAAALPAALGSVESWVTAKL 875


>gi|15640567|ref|NP_230196.1| alanyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121590679|ref|ZP_01678012.1| alanyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|121728567|ref|ZP_01681589.1| alanyl-tRNA synthetase [Vibrio cholerae V52]
 gi|153819108|ref|ZP_01971775.1| alanyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|153823946|ref|ZP_01976613.1| alanyl-tRNA synthetase [Vibrio cholerae B33]
 gi|227080728|ref|YP_002809279.1| alanyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|229507157|ref|ZP_04396663.1| alanyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229508981|ref|ZP_04398469.1| alanyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229519648|ref|ZP_04409091.1| alanyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229606165|ref|YP_002876813.1| alanyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254850784|ref|ZP_05240134.1| alanyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|255744228|ref|ZP_05418181.1| alanyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|360037170|ref|YP_004938933.1| alanyl-tRNA synthetase [Vibrio cholerae O1 str. 2010EL-1786]
 gi|379740417|ref|YP_005332386.1| alanyl-tRNA synthetase [Vibrio cholerae IEC224]
 gi|417815377|ref|ZP_12462011.1| alanyl-tRNA synthetase [Vibrio cholerae HCUF01]
 gi|418331520|ref|ZP_12942462.1| alanyl-tRNA synthetase [Vibrio cholerae HC-06A1]
 gi|418336395|ref|ZP_12945294.1| alanyl-tRNA synthetase [Vibrio cholerae HC-23A1]
 gi|418342776|ref|ZP_12949574.1| alanyl-tRNA synthetase [Vibrio cholerae HC-28A1]
 gi|418347939|ref|ZP_12952675.1| alanyl-tRNA synthetase [Vibrio cholerae HC-43A1]
 gi|419825022|ref|ZP_14348528.1| alanine--tRNA ligase [Vibrio cholerae CP1033(6)]
 gi|421315762|ref|ZP_15766334.1| alanyl-tRNA synthetase [Vibrio cholerae CP1032(5)]
 gi|421323367|ref|ZP_15773896.1| alanyl-tRNA synthetase [Vibrio cholerae CP1041(14)]
 gi|421327771|ref|ZP_15778287.1| alanyl-tRNA synthetase [Vibrio cholerae CP1042(15)]
 gi|421330779|ref|ZP_15781261.1| alanyl-tRNA synthetase [Vibrio cholerae CP1046(19)]
 gi|421338257|ref|ZP_15788695.1| alanyl-tRNA synthetase [Vibrio cholerae HC-20A2]
 gi|421346644|ref|ZP_15797027.1| alanyl-tRNA synthetase [Vibrio cholerae HC-46A1]
 gi|422890590|ref|ZP_16933006.1| alanyl-tRNA synthetase [Vibrio cholerae HC-40A1]
 gi|422901457|ref|ZP_16936825.1| alanyl-tRNA synthetase [Vibrio cholerae HC-48A1]
 gi|422905673|ref|ZP_16940524.1| alanyl-tRNA synthetase [Vibrio cholerae HC-70A1]
 gi|422912277|ref|ZP_16946804.1| alanyl-tRNA synthetase [Vibrio cholerae HFU-02]
 gi|422924756|ref|ZP_16957790.1| alanyl-tRNA synthetase [Vibrio cholerae HC-38A1]
 gi|423144080|ref|ZP_17131695.1| alanyl-tRNA synthetase [Vibrio cholerae HC-19A1]
 gi|423148784|ref|ZP_17136144.1| alanyl-tRNA synthetase [Vibrio cholerae HC-21A1]
 gi|423152575|ref|ZP_17139774.1| alanyl-tRNA synthetase [Vibrio cholerae HC-22A1]
 gi|423155357|ref|ZP_17142494.1| alanyl-tRNA synthetase [Vibrio cholerae HC-32A1]
 gi|423163903|ref|ZP_17150692.1| alanyl-tRNA synthetase [Vibrio cholerae HC-48B2]
 gi|423730030|ref|ZP_17703349.1| alanine--tRNA ligase [Vibrio cholerae HC-17A1]
 gi|423747523|ref|ZP_17711426.1| alanine--tRNA ligase [Vibrio cholerae HC-50A2]
 gi|423891749|ref|ZP_17725440.1| alanine--tRNA ligase [Vibrio cholerae HC-62A1]
 gi|423926526|ref|ZP_17730055.1| alanine--tRNA ligase [Vibrio cholerae HC-77A1]
 gi|424001081|ref|ZP_17744171.1| alanine--tRNA ligase [Vibrio cholerae HC-17A2]
 gi|424005241|ref|ZP_17748226.1| alanine--tRNA ligase [Vibrio cholerae HC-37A1]
 gi|424023250|ref|ZP_17762915.1| alanine--tRNA ligase [Vibrio cholerae HC-62B1]
 gi|424026052|ref|ZP_17765669.1| alanine--tRNA ligase [Vibrio cholerae HC-69A1]
 gi|424585457|ref|ZP_18025051.1| alanyl-tRNA synthetase [Vibrio cholerae CP1030(3)]
 gi|424594075|ref|ZP_18033414.1| alanyl-tRNA synthetase [Vibrio cholerae CP1040(13)]
 gi|424598013|ref|ZP_18037213.1| alanyl-tRNA synthetase [Vibrio Cholerae CP1044(17)]
 gi|424600773|ref|ZP_18039930.1| alanyl-tRNA synthetase [Vibrio cholerae CP1047(20)]
 gi|424605667|ref|ZP_18044633.1| alanyl-tRNA synthetase [Vibrio cholerae CP1050(23)]
 gi|424609505|ref|ZP_18048364.1| alanyl-tRNA synthetase [Vibrio cholerae HC-39A1]
 gi|424612306|ref|ZP_18051114.1| alanyl-tRNA synthetase [Vibrio cholerae HC-41A1]
 gi|424616182|ref|ZP_18054874.1| alanyl-tRNA synthetase [Vibrio cholerae HC-42A1]
 gi|424621062|ref|ZP_18059591.1| alanyl-tRNA synthetase [Vibrio cholerae HC-47A1]
 gi|424644040|ref|ZP_18081795.1| alanyl-tRNA synthetase [Vibrio cholerae HC-56A2]
 gi|424651685|ref|ZP_18089210.1| alanyl-tRNA synthetase [Vibrio cholerae HC-57A2]
 gi|424655632|ref|ZP_18092935.1| alanyl-tRNA synthetase [Vibrio cholerae HC-81A2]
 gi|440708756|ref|ZP_20889417.1| alanyl-tRNA synthetase [Vibrio cholerae 4260B]
 gi|443502581|ref|ZP_21069571.1| alanyl-tRNA synthetase [Vibrio cholerae HC-64A1]
 gi|443506492|ref|ZP_21073285.1| alanyl-tRNA synthetase [Vibrio cholerae HC-65A1]
 gi|443510600|ref|ZP_21077266.1| alanyl-tRNA synthetase [Vibrio cholerae HC-67A1]
 gi|443514159|ref|ZP_21080701.1| alanyl-tRNA synthetase [Vibrio cholerae HC-68A1]
 gi|443517973|ref|ZP_21084392.1| alanyl-tRNA synthetase [Vibrio cholerae HC-71A1]
 gi|443522841|ref|ZP_21089083.1| alanyl-tRNA synthetase [Vibrio cholerae HC-72A2]
 gi|443537812|ref|ZP_21103669.1| alanyl-tRNA synthetase [Vibrio cholerae HC-81A1]
 gi|449054225|ref|ZP_21732893.1| Alanyl-tRNA synthetase [Vibrio cholerae O1 str. Inaba G4222]
 gi|12644031|sp|Q56648.2|SYA_VIBCH RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|9654973|gb|AAF93713.1| alanyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121547465|gb|EAX57573.1| alanyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|121629179|gb|EAX61620.1| alanyl-tRNA synthetase [Vibrio cholerae V52]
 gi|126510340|gb|EAZ72934.1| alanyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|126518530|gb|EAZ75753.1| alanyl-tRNA synthetase [Vibrio cholerae B33]
 gi|227008616|gb|ACP04828.1| alanyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|229344337|gb|EEO09312.1| alanyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229353906|gb|EEO18840.1| alanyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229355902|gb|EEO20822.1| alanyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229368820|gb|ACQ59243.1| alanyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254846489|gb|EET24903.1| alanyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|255738168|gb|EET93560.1| alanyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|340043363|gb|EGR04322.1| alanyl-tRNA synthetase [Vibrio cholerae HCUF01]
 gi|341625459|gb|EGS50912.1| alanyl-tRNA synthetase [Vibrio cholerae HC-70A1]
 gi|341626602|gb|EGS51973.1| alanyl-tRNA synthetase [Vibrio cholerae HC-48A1]
 gi|341627110|gb|EGS52438.1| alanyl-tRNA synthetase [Vibrio cholerae HC-40A1]
 gi|341641057|gb|EGS65629.1| alanyl-tRNA synthetase [Vibrio cholerae HFU-02]
 gi|341648584|gb|EGS72636.1| alanyl-tRNA synthetase [Vibrio cholerae HC-38A1]
 gi|356420547|gb|EHH74066.1| alanyl-tRNA synthetase [Vibrio cholerae HC-06A1]
 gi|356421722|gb|EHH75214.1| alanyl-tRNA synthetase [Vibrio cholerae HC-21A1]
 gi|356426213|gb|EHH79537.1| alanyl-tRNA synthetase [Vibrio cholerae HC-19A1]
 gi|356433176|gb|EHH86369.1| alanyl-tRNA synthetase [Vibrio cholerae HC-23A1]
 gi|356434741|gb|EHH87915.1| alanyl-tRNA synthetase [Vibrio cholerae HC-22A1]
 gi|356437994|gb|EHH91059.1| alanyl-tRNA synthetase [Vibrio cholerae HC-28A1]
 gi|356443175|gb|EHH96004.1| alanyl-tRNA synthetase [Vibrio cholerae HC-32A1]
 gi|356448050|gb|EHI00835.1| alanyl-tRNA synthetase [Vibrio cholerae HC-43A1]
 gi|356456422|gb|EHI09028.1| alanyl-tRNA synthetase [Vibrio cholerae HC-48B2]
 gi|356648324|gb|AET28379.1| alanyl-tRNA synthetase [Vibrio cholerae O1 str. 2010EL-1786]
 gi|378793927|gb|AFC57398.1| alanyl-tRNA synthetase [Vibrio cholerae IEC224]
 gi|395922503|gb|EJH33319.1| alanyl-tRNA synthetase [Vibrio cholerae CP1032(5)]
 gi|395923212|gb|EJH34024.1| alanyl-tRNA synthetase [Vibrio cholerae CP1041(14)]
 gi|395931505|gb|EJH42250.1| alanyl-tRNA synthetase [Vibrio cholerae CP1042(15)]
 gi|395934632|gb|EJH45370.1| alanyl-tRNA synthetase [Vibrio cholerae CP1046(19)]
 gi|395945377|gb|EJH56043.1| alanyl-tRNA synthetase [Vibrio cholerae HC-20A2]
 gi|395946792|gb|EJH57452.1| alanyl-tRNA synthetase [Vibrio cholerae HC-46A1]
 gi|395962956|gb|EJH73244.1| alanyl-tRNA synthetase [Vibrio cholerae HC-56A2]
 gi|395963844|gb|EJH74096.1| alanyl-tRNA synthetase [Vibrio cholerae HC-57A2]
 gi|395966673|gb|EJH76788.1| alanyl-tRNA synthetase [Vibrio cholerae HC-42A1]
 gi|395974858|gb|EJH84368.1| alanyl-tRNA synthetase [Vibrio cholerae HC-47A1]
 gi|395977600|gb|EJH87005.1| alanyl-tRNA synthetase [Vibrio cholerae CP1030(3)]
 gi|395978993|gb|EJH88357.1| alanyl-tRNA synthetase [Vibrio cholerae CP1047(20)]
 gi|408009767|gb|EKG47662.1| alanyl-tRNA synthetase [Vibrio cholerae HC-39A1]
 gi|408016647|gb|EKG54181.1| alanyl-tRNA synthetase [Vibrio cholerae HC-41A1]
 gi|408037213|gb|EKG73613.1| alanyl-tRNA synthetase [Vibrio cholerae CP1040(13)]
 gi|408044886|gb|EKG80772.1| alanyl-tRNA synthetase [Vibrio Cholerae CP1044(17)]
 gi|408046780|gb|EKG82449.1| alanyl-tRNA synthetase [Vibrio cholerae CP1050(23)]
 gi|408057408|gb|EKG92259.1| alanyl-tRNA synthetase [Vibrio cholerae HC-81A2]
 gi|408611293|gb|EKK84654.1| alanine--tRNA ligase [Vibrio cholerae CP1033(6)]
 gi|408627406|gb|EKL00218.1| alanine--tRNA ligase [Vibrio cholerae HC-17A1]
 gi|408641822|gb|EKL13588.1| alanine--tRNA ligase [Vibrio cholerae HC-50A2]
 gi|408658595|gb|EKL29661.1| alanine--tRNA ligase [Vibrio cholerae HC-77A1]
 gi|408659602|gb|EKL30641.1| alanine--tRNA ligase [Vibrio cholerae HC-62A1]
 gi|408848836|gb|EKL88873.1| alanine--tRNA ligase [Vibrio cholerae HC-37A1]
 gi|408849397|gb|EKL89418.1| alanine--tRNA ligase [Vibrio cholerae HC-17A2]
 gi|408873458|gb|EKM12655.1| alanine--tRNA ligase [Vibrio cholerae HC-62B1]
 gi|408881373|gb|EKM20269.1| alanine--tRNA ligase [Vibrio cholerae HC-69A1]
 gi|439975852|gb|ELP51959.1| alanyl-tRNA synthetase [Vibrio cholerae 4260B]
 gi|443432972|gb|ELS75492.1| alanyl-tRNA synthetase [Vibrio cholerae HC-64A1]
 gi|443436908|gb|ELS83022.1| alanyl-tRNA synthetase [Vibrio cholerae HC-65A1]
 gi|443440471|gb|ELS90158.1| alanyl-tRNA synthetase [Vibrio cholerae HC-67A1]
 gi|443444568|gb|ELS97839.1| alanyl-tRNA synthetase [Vibrio cholerae HC-68A1]
 gi|443448403|gb|ELT05036.1| alanyl-tRNA synthetase [Vibrio cholerae HC-71A1]
 gi|443451177|gb|ELT11439.1| alanyl-tRNA synthetase [Vibrio cholerae HC-72A2]
 gi|443466637|gb|ELT41294.1| alanyl-tRNA synthetase [Vibrio cholerae HC-81A1]
 gi|448266222|gb|EMB03451.1| Alanyl-tRNA synthetase [Vibrio cholerae O1 str. Inaba G4222]
          Length = 860

 Score =  590 bits (1520), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 358/922 (38%), Positives = 515/922 (55%), Gaps = 80/922 (8%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR  F  FFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI++AWE LT V +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           P +RL  T +          D+EA DIW K   +PA R++  G K        DNFW+MG
Sbjct: 122 PKERLLVTVY--------ETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKH 289
           DTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG+++PLP   
Sbjct: 174 DTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPS 233

Query: 290 VDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRV 349
           VDTG+G ER+++I+Q   SNY+ DVF  +  A   A G +           D  + + RV
Sbjct: 234 VDTGMGIERISAIMQGVHSNYEIDVFQTLIKAAADAIGYQ-----------DLTNQSLRV 282

Query: 350 VADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVM 409
           VADHIR+ +F I DG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF+ LV  + +VM
Sbjct: 283 VADHIRSCAFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGAFFHKLVGPLAEVM 341

Query: 410 GDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTY 469
           G    ELK+++A + +++  EE +FG+TL +G+     A   + G+VL G+  F L+DTY
Sbjct: 342 GTAGVELKKQQALVEKVLRIEEENFGRTLDRGMSILNDALDQLSGQVLDGETVFKLYDTY 401

Query: 470 GFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRG 529
           GFP DLT  +A ERG  +D  GF  AM+E R+R+R A      G    D +   +L K  
Sbjct: 402 GFPADLTNDVARERGFSIDEAGFEQAMEEQRQRAREA------GQFGTDYN---SLIKS- 451

Query: 530 VLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEG 589
             AT+  F        +SV++ ++     + ++  G++  IVL ++ FYAE GGQ  D G
Sbjct: 452 --ATNTEFCGYTASRGQSVVREMFVEGAEVSTLSAGDKAIIVLDNTPFYAESGGQCGDTG 509

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
            ++   G F+V + Q  G  + H G + +G    + G++V   VD  RR  I+ NH+ TH
Sbjct: 510 VLKTDAGIFHVEDTQKLGNAIAHHGVIAQGV--LATGDQVDAIVDEKRRAAISLNHSATH 567

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +L+ ALR+VLG+HV QKGS+V  E LRFDFSH + +    ++ +E +VN++++    + +
Sbjct: 568 LLHAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTAAEIKEVERLVNQEVRRNHSIET 627

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
               + EAK   G  A+FGE Y D VRV+++G                  S ELCGG H 
Sbjct: 628 NIMNIDEAKA-KGAMALFGEKYDDQVRVLSMG----------------DFSTELCGGIHA 670

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKN 829
           SNT +   F ++SE GIA GIRRI AVT   A    +A  +           +  LLEK 
Sbjct: 671 SNTGDIGLFKIISEGGIAAGIRRIEAVTGEGALDYLDAQQAQHDAKVSEMAAKAKLLEK- 729

Query: 830 QVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQK 889
           ++++ + K+A +     +    + A      G    ++++  G D  A+R  V  +  Q 
Sbjct: 730 EIQQLKDKLAAKESAGLINQVKQIA------GVNVLVAQLN-GADNKALRGMVDDLKNQL 782

Query: 890 GMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQ 949
              +++   +    K  + AGV   +D + +++  E +      + G+ G G+  +A   
Sbjct: 783 SSGIIMLG-NVAEGKVGLIAGVT--NDLTNKVKAGELVNMVALQVGGK-GGGRPDMAQAG 838

Query: 950 GTDAAQVTPAMDLAAEFAAMKL 971
           GTDA  +  A++    + A +L
Sbjct: 839 GTDAHALPSALESVDAWIAERL 860


>gi|387895188|ref|YP_006325485.1| alanyl-tRNA synthetase [Pseudomonas fluorescens A506]
 gi|387160972|gb|AFJ56171.1| alanyl-tRNA synthetase [Pseudomonas fluorescens A506]
          Length = 872

 Score =  590 bits (1520), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 360/911 (39%), Positives = 511/911 (56%), Gaps = 82/911 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F +FFE++ H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLRFFEEQGHTRVASSSLIPGNDPTLLFTNAGMNQFKDCFLGQ-----EKRAY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           TRA ++QKC+RAGGK++DL++VG    HHTFFEMLGN+SFGDYFK +AI +AW  LT V 
Sbjct: 58  TRATSSQKCVRAGGKNSDLENVGYTARHHTFFEMLGNFSFGDYFKKDAITFAWTFLTGVL 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFWEM 230
           +LP ++L+ T +        A D+EA DIW + +  PA R++  G         DNFW M
Sbjct: 118 KLPKEKLWVTVY--------ATDDEAYDIWTQEIGVPAERMIRIGDNKGAPYASDNFWTM 169

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG L PLPA 
Sbjct: 170 GDTGPCGPCTEIFYDHGDDIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLPAP 229

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+++++Q+  SNY+ D+F  +  A   A G            A++   + +
Sbjct: 230 SVDTGMGLERISAVMQHVHSNYEIDLFTNLLSASAAAIGC-----------ANEGQSSLK 278

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           VV+DHIR+  F IADG  P NEGR YVLRRI+RRA R+G++ L A   FF  +V  +V  
Sbjct: 279 VVSDHIRSCGFLIADGVLPSNEGRGYVLRRIIRRACRHGNK-LGATGSFFYKIVAALVAE 337

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MGD FPELKQ++++I  ++ AEE  F KTL  G++  ++   +++G V+ G   F L+DT
Sbjct: 338 MGDAFPELKQQQSNIERVLKAEEEQFSKTLEHGLKILEQDLAELKGTVVPGDVVFKLYDT 397

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +A ER L VD  GF   M+  R R+RSA +       ++  D        
Sbjct: 398 YGFPMDLTADIARERELTVDEAGFEREMEAQRVRARSASSFGLDYNTLVKVDVPTEF--T 455

Query: 529 GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDE 588
           G  AT  S K +          AIY   + ++ +  G E  +VL  + FYAE GGQI D 
Sbjct: 456 GYKATAGSAKIV----------AIYKDGKSVDVLSEGEEAVVVLDQTPFYAESGGQIGDC 505

Query: 589 GFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
           GF+    G F VR+    GG  +H G L    G  +VG  V  +VD D R   A NH+ T
Sbjct: 506 GFLSSTSGRFDVRDTTKTGGAFLHHGVLV--LGNLTVGAPVDTQVDADVRHATALNHSAT 563

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+L+ ALR+VLG+HV QKGS+V  ++LRFDFSH + + PE ++ +E IVN +I+    V 
Sbjct: 564 HLLHAALRQVLGEHVQQKGSLVDSQRLRFDFSHFEAIKPEQIKALEDIVNAEIRKNTPVE 623

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
           ++E  +  A+   G  A+FGE Y D VRV+++G                S S ELCGG H
Sbjct: 624 TEETDIETARN-KGAMALFGEKYGDEVRVLSMGG---------------SFSVELCGGIH 667

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAF--------EAACSLEKEVDDASK 820
            + T +     ++SE G+A G+RRI AVT   A            EAA  ++   D+   
Sbjct: 668 ANRTGDIGLLKIISEGGVASGVRRIEAVTGAAALAYLNAAEEQLKEAAGLVKGSRDNLID 727

Query: 821 IEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEV-GLDAAAVR 879
              ++LE+N   +A +K  E+   KA   A +   AAA + K   +    + G D  A+ 
Sbjct: 728 KLSAVLERN---RALEKQLEQLQAKAASAAGDDLSAAAVDVKDVKVLAARLDGQDGKALL 784

Query: 880 EAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCG 939
             V ++  + G  V++  +    +K V+ AGV +  D + QL+  + +  A   + G+ G
Sbjct: 785 ALVDQLKNKLGRAVILLGSVH-EDKVVLVAGVTK--DLTGQLKAGDLMKQAAATVGGK-G 840

Query: 940 KGKGGLASGQG 950
            G+  +A G G
Sbjct: 841 GGRPDMAQGGG 851


>gi|387129200|ref|YP_006292090.1| alanyl-tRNA synthetase [Methylophaga sp. JAM7]
 gi|386270489|gb|AFJ01403.1| Alanyl-tRNA synthetase [Methylophaga sp. JAM7]
          Length = 867

 Score =  590 bits (1520), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 362/926 (39%), Positives = 522/926 (56%), Gaps = 84/926 (9%)

Query: 63  VRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRA 122
           +R  F  +F  K H   +SSP+VP NDPTLLF NAGM Q+K +FLG      +  K+ RA
Sbjct: 7   IRQLFLDYFAGKGHEVVESSPLVPANDPTLLFTNAGMVQFKDVFLGN-----ESRKIPRA 61

Query: 123 CNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLP 182
            +TQ+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK EAI++AWE LT    LP
Sbjct: 62  TSTQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIQYAWEFLTVSLALP 121

Query: 183 ADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCKDNFWEMGDTGPCGPCS 240
            ++L+ T F  DE        EA DIWL    + A R    G KDNFW MGDTGPCGPCS
Sbjct: 122 PEKLWVTVFEEDE--------EAADIWLNEVGISADRFSRIGAKDNFWSMGDTGPCGPCS 173

Query: 241 EIHYDRTGNRDAASLVNN---DDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFE 297
           EI YD  G   A     +   D    IEIWN+VF+QF+R +DG+L PLP   VDTG+G E
Sbjct: 174 EIFYDH-GEEVAGGPPGSPEEDGDRYIEIWNLVFMQFDRSADGTLTPLPKPSVDTGMGLE 232

Query: 298 RLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTL 357
           RL ++LQ K +NYD D+F  +  AI Q  G             D    + RV+ADHIR+ 
Sbjct: 233 RLAAVLQGKHNNYDIDLFQNLITAIVQLAGID-----------DTTHTSARVIADHIRSC 281

Query: 358 SFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELK 417
           +F I DG  P NEGR YVLRRI+RRA+R+G + L  +  FF+ LV  +V  MGD FPEL 
Sbjct: 282 AFMITDGVQPSNEGRGYVLRRIIRRAIRHGHK-LGLKQAFFHKLVAPLVNEMGDAFPELV 340

Query: 418 QREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQ 477
           + +  +   +A EE  F  TL  G++   +A   +  K + G+  F+L+DTYGFP+DLT 
Sbjct: 341 KAQPLVERALALEEERFADTLDNGLKILDQAIDAMADKEIPGETVFLLYDTYGFPIDLTA 400

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSF 537
            +A ER L +DI GF   M+  R R+R+A ++ AGG           L +  ++  +  F
Sbjct: 401 DIARERNLTIDIAGFERHMEAQRNRARNA-SQFAGG-----------LSENLIIDGETVF 448

Query: 538 KFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFGS 597
                   ++ I A+    E + ++  G    IVL  + FYAE GGQ+ D+G I      
Sbjct: 449 CGYDHTRQEATIMALLVDGENVNTLEAGQTGIIVLDHTPFYAESGGQVGDKGEINSAGAH 508

Query: 598 FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALRE 657
           F V + +  G    H+G      G+F +G+++I  VD   R+  A NH+ TH+L+ ALR+
Sbjct: 509 FSVMDTRKQGKAFAHMGECKH--GQFEIGQQIIAHVDESNRQATALNHSATHLLHAALRQ 566

Query: 658 VLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEA 717
           VLGDHV+QKGS+V  ++LRFDFSH + V  E +R IE +VN+QI+    V ++   L +A
Sbjct: 567 VLGDHVNQKGSLVNAQRLRFDFSHYEAVSAEQVREIERLVNQQIRINHTVETRLMPLEKA 626

Query: 718 K-CINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAE 776
           + C  G  A+FGE Y D VRV+++G                  S ELCGGTH+  T +  
Sbjct: 627 RDC--GAMALFGEKYDDEVRVLSMG----------------EFSIELCGGTHVGRTGDIG 668

Query: 777 AFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKNQVRKAQK 836
            F +++E GIA G+RRI AVT  +A    E A +   ++ D  K +   +E+  ++  QK
Sbjct: 669 LFKIINEAGIASGVRRIEAVTGDIALDIVEDAENRLSKISDLVKAKADNVEEKTLQLVQK 728

Query: 837 KVAEENLQKAVKVATETAEAAASNGKPFCISRVEV-----------GLDAAAVREAVLKV 885
                N Q   ++ +  A+ A+S G+      +++           G+D  A+R+A+ ++
Sbjct: 729 -----NRQLEKELESLKAKLASSAGQDMANEAIDIHGVKVLAAKLDGVDVKALRDAMDQL 783

Query: 886 IEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGL 945
             + G  V+V + + + +K  + AGV +   Q++++   + +    + + G+ G G+  +
Sbjct: 784 KNKLGDAVIVLA-NVSDDKITLIAGVTKA--QTEKVRAGDLVAHVAKQVGGK-GGGRPDM 839

Query: 946 ASGQGTDAAQVTPAMDLAAEFAAMKL 971
           A G G     ++ A+D  A++   KL
Sbjct: 840 AQGGGNQPENLSQALDSVAQWVTDKL 865


>gi|329296669|ref|ZP_08254005.1| alanyl-tRNA synthetase [Plautia stali symbiont]
          Length = 875

 Score =  590 bits (1520), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 352/930 (37%), Positives = 508/930 (54%), Gaps = 81/930 (8%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGM Q+K +FLG    +      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMVQFKDVFLGQDKRD-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK EAI +AWELLT  + +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKKEAIAYAWELLTGEQWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFWEM 230
           +LP +RL+ T +          D+EA +IW   +  P  R++  G         DNFW+M
Sbjct: 122 KLPKERLWVTVY--------ETDDEAFEIWANDIGVPRERIIRIGDNKGGAYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMQPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNY  D+F  + +A+ Q TGA   + K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVYSNYKIDLFAKLINAVAQVTGATDLNNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  +++V
Sbjct: 283 VIADHIRSCAFLIADGVIPSNENRGYVLRRIIRRAVRHGN-MLGAKEAFFYKLVAPLIEV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++ H+   +  EE  F KTL +G+         ++G  L G+  F L+DT
Sbjct: 342 MGAAGEDLKRQQKHVENALKNEEEQFAKTLERGLALLDDELAKLKGDTLDGETVFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           +GFP DLT  +  ER L +D  GF  AM++ R+R+R A         V+  D        
Sbjct: 402 FGFPADLTADVCRERNLKIDEAGFEAAMEQQRQRAREASGFGTDYNTVIRFD-------- 453

Query: 529 GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDE 588
               T   FK       ++ ++A++   + +E V  G +  ++L  + FY E GGQ+ D 
Sbjct: 454 ----TPTQFKGYDHLSLEATVQALFVDGQQVEQVAAGQDAVVILDQTPFYGESGGQVGDT 509

Query: 589 GFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
           G + G    F V++ Q YG    HIG L +  G+  VG+ +  +VD  RR  I  NH+ T
Sbjct: 510 GVLTGQNAEFSVQDTQKYGKAFGHIGKLRQ--GQLRVGDRLQAQVDEVRRSRIILNHSAT 567

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+++ ALR+VLGDHV QKGS+   + LRFDFSHG+ + P+ +R +E IVN QI+  L + 
Sbjct: 568 HLMHEALRKVLGDHVGQKGSLNNDKYLRFDFSHGEAMKPQQIRAVEDIVNAQIRRNLPIT 627

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
           +    L EAK + G  A+FGE Y   VRVV++G                  S ELCGGTH
Sbjct: 628 TNVMDLEEAKAL-GATALFGEKYDQRVRVVSMG----------------EYSIELCGGTH 670

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEK 828
            + T +   F +  E G A GIRRI AVT   A     A      ++    K   S L +
Sbjct: 671 AARTGDIGLFRIQGEAGTAAGIRRIEAVTGEAAIAQLHAQSDQLTDIAQVVKANHSYLNE 730

Query: 829 N------QVRKAQKKVAE-ENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREA 881
                   VR  +K++ +  + Q A + A+ +++A    G    +S +   ++   +R  
Sbjct: 731 KVRGLVENVRALEKELQQLRDQQAAQESASLSSKAVEVKGAKLLVSELS-NVEPKMLRTM 789

Query: 882 VLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKG 941
           V  +  Q G  V+V +T      +++     + +D+ K  E+   L A +    G  G G
Sbjct: 790 VDDLKNQLGSAVIVLATVAEGKVSLIAGVTKDLTDRVKAGELIGELAAQV----GGKGGG 845

Query: 942 KGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           +  LA   GTDA  ++ A+    E+ + +L
Sbjct: 846 RPDLAQAGGTDAQALSGALVSVPEWVSNRL 875


>gi|300722254|ref|YP_003711538.1| alanyl-tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
 gi|297628755|emb|CBJ89333.1| alanyl-tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
          Length = 875

 Score =  590 bits (1520), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 356/935 (38%), Positives = 518/935 (55%), Gaps = 91/935 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSK--L 119
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG       L K   
Sbjct: 7   EIRQAFLDFFHTKGHQVVPSSSLVPTNDPTLLFTNAGMNQFKDVFLG-------LDKRPY 59

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           +RA   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI++AWELLT  K
Sbjct: 60  SRATTAQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIKYAWELLTSEK 119

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFW 228
            + LP ++L+ T +          D+EA DIW K   +P  R++  G         DNFW
Sbjct: 120 WFNLPKEKLWVTVY--------ETDDEAYDIWHKEVGVPTERIIRIGDNKGAPYASDNFW 171

Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
           +MGDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR  DG+++PLP
Sbjct: 172 QMGDTGPCGPCTEIFYDHGEHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRHVDGTMEPLP 231

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
              VDTG+G ER+T++LQ+  SNY+ D+F  +  ++   TGA            D  + +
Sbjct: 232 KPSVDTGMGLERITAVLQHVNSNYEIDLFQSLIASVADVTGA-----------TDLTNKS 280

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            RVVADHIR  +F I DG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++
Sbjct: 281 LRVVADHIRACAFLICDGVVPSNENRGYVLRRIIRRAVRHGN-MLGAKEAFFYKLVAPLI 339

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
           K+MG    ELKQ++A + +++  EE  F +TL +G++   +    + G  L G+ AF L+
Sbjct: 340 KIMGAAGEELKQQQALVEQVLKTEEEQFARTLERGLQLLDEELAKLSGDTLDGETAFRLY 399

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFP+DLT  +  ER + VD  GF  AM+  R R+R +              +     
Sbjct: 400 DTYGFPVDLTADVCRERNIKVDEAGFEMAMENQRRRARES--------------SGFGTD 445

Query: 527 KRGVLATDDSFKFIWFQ--DHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
              ++  D S  F  ++    ++++ AI+   E +E +  G E  ++L  ++FYAE GGQ
Sbjct: 446 YNELIKVDGSSDFCGYEHNSQQAIVTAIFRNGESVEQIHAGEEAVVILDKTAFYAESGGQ 505

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
             D G +    G F V + Q Y   + HIG LT G    +V   V  ++D  RR  I  N
Sbjct: 506 AGDMGHLLNSDGVFEVLDTQKYAQVIGHIGKLTSGI--LAVNHTVNAEIDVVRRDAIRLN 563

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ ALR++LG+HV QKGS+V  + LRFDFSH + +  E +R++E++VNE+I+  
Sbjct: 564 HSATHLLHAALRQILGEHVAQKGSLVNDKYLRFDFSHFEAMKSEQIRQVENLVNEEIRKN 623

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
             V ++   L +AK   G  A+FGE Y + VRV+++G                  S ELC
Sbjct: 624 SPVVTELMALEDAKS-KGAMALFGEKYDEKVRVLSMG----------------GFSTELC 666

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEG- 823
           GGTH S T +   F + SE G A GIRRI A+T   A  A      L +++  A  ++G 
Sbjct: 667 GGTHASRTGDIGVFRISSESGTAAGIRRIEAITGQTALDAIYQQTDLLQDI--AHLVKGD 724

Query: 824 --SLLEKNQVRKAQKKVAEENLQK-AVKVATETAEAAASNGKPFCISRVEV----GLDAA 876
             SL EK +    + K  E+ LQ+   + A + + + A+  K     R+ V     ++  
Sbjct: 725 ISSLNEKVKTTLDRMKQLEKELQQLKSQQAAQESSSLANQTKEIQGVRLLVTQLGDVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V ST    +K  +  G+ +  D + +++  + ++   Q + G
Sbjct: 785 MLRTMVDDLKNQLGSAIIVLST-VAGDKVSLIVGITK--DLTAKIKAGDLISFVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           + G G+  LA   GTD   +  A+    E+  ++L
Sbjct: 842 K-GGGRPDLAQAGGTDVTALPTALASVEEWVTLRL 875


>gi|153829905|ref|ZP_01982572.1| alanyl-tRNA synthetase [Vibrio cholerae 623-39]
 gi|148874593|gb|EDL72728.1| alanyl-tRNA synthetase [Vibrio cholerae 623-39]
          Length = 860

 Score =  590 bits (1520), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 359/922 (38%), Positives = 515/922 (55%), Gaps = 80/922 (8%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR  F  FFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI++AWE LT V +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           P +RL  T +          D+EA DIW K   +PA R++  G K        DNFW+MG
Sbjct: 122 PKERLLVTVY--------ETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKH 289
           DTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG+++PLP   
Sbjct: 174 DTGPCGPCTEIFYDHGEHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPS 233

Query: 290 VDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRV 349
           VDTG+G ER+++I+Q   SNY+ DVF  +  A   A G +           D  + + RV
Sbjct: 234 VDTGMGIERISAIMQGVHSNYEIDVFQTLIKAAADAIGYQ-----------DLTNQSLRV 282

Query: 350 VADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVM 409
           VADHIR+ +F I DG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF+ LV  + +VM
Sbjct: 283 VADHIRSCAFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGAFFHKLVGPLAEVM 341

Query: 410 GDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTY 469
           G    ELK+++A + +++  EE +FG+TL +G+     A   + G+VL G+  F L+DTY
Sbjct: 342 GTAGVELKKQQALVEKVLRIEEENFGRTLDRGMSILNDALDQLSGQVLDGETVFKLYDTY 401

Query: 470 GFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRG 529
           GFP DLT  +A ERG  +D  GF  AM+E R+R+R A      G    D +   +L K  
Sbjct: 402 GFPADLTNDVARERGFSIDEAGFEQAMEEQRQRAREA------GQFGTDYN---SLIKS- 451

Query: 530 VLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEG 589
             AT+  F        +SV++ ++     + ++  G++  IVL ++ FYAE GGQ  D G
Sbjct: 452 --ATNTEFCGYTASRGQSVVREMFVEGAEVSTLSAGDKAIIVLDNTPFYAESGGQCGDTG 509

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
            ++   G F+V + Q  G  + H G L +G    + G++V   VD  RR  I+ NH+ TH
Sbjct: 510 VLKTDAGIFHVEDTQKLGNAIAHHGVLAQGV--LATGDQVDAIVDEKRRAAISLNHSATH 567

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +L+ ALR+VLG+HV QKGS+V  E LRFDFSH + +    ++ +E +VN++++    + +
Sbjct: 568 LLHAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTAAEIKEVERLVNQEVRRNHSIET 627

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
               + EAK   G  A+FGE Y D VRV+++G                  S ELCGG H 
Sbjct: 628 NIMNIDEAKA-KGAMALFGEKYDDQVRVLSMG----------------DFSTELCGGIHA 670

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKN 829
           SNT +   F ++SE GIA GIRRI AVT   A    +A  +           +  LLEK 
Sbjct: 671 SNTGDIGLFKIISEGGIAAGIRRIEAVTGEGALDYLDAQQAQHDAKVSEMAAKAKLLEK- 729

Query: 830 QVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQK 889
           ++++ + K+A +     +    + A      G    ++++  G D  A+R  V  +  Q 
Sbjct: 730 EIQQLKDKLAAKESAGLINQVKQIA------GVNVLVAQLN-GADNKALRGMVDDLKNQL 782

Query: 890 GMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQ 949
              +++   +    K  + AGV   +D + +++  E +      + G+ G G+  +A   
Sbjct: 783 SSGIIMLG-NVAEGKVGLIAGVT--NDLTNKVKAGELVNMVALQVGGK-GGGRPDMAQAG 838

Query: 950 GTDAAQVTPAMDLAAEFAAMKL 971
           GTDA  +  A++    + A +L
Sbjct: 839 GTDAHALPSALESVDAWIAERL 860


>gi|268593120|ref|ZP_06127341.1| alanine--tRNA ligase [Providencia rettgeri DSM 1131]
 gi|291311391|gb|EFE51844.1| alanine--tRNA ligase [Providencia rettgeri DSM 1131]
          Length = 875

 Score =  589 bits (1519), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 357/934 (38%), Positives = 529/934 (56%), Gaps = 89/934 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSK--L 119
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG       L K   
Sbjct: 7   EIRQAFLDFFHTKGHQVVSSSSLVPNNDPTLLFTNAGMNQFKDVFLG-------LDKRAY 59

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           +RA   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI +AWELLT  +
Sbjct: 60  SRATTAQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIRFAWELLTSEE 119

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFW 228
            + LP +RL+ T +        A D+EA DIW K   +P  R++  G         DNFW
Sbjct: 120 WFNLPKERLWVTVY--------ATDDEAYDIWNKEIGIPVERIIRIGDNKGAPYASDNFW 171

Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
           +MGDTGPCGPC+EI YD   +           D    IEIWN+VF+QFNR+SDG+++PLP
Sbjct: 172 QMGDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNLVFMQFNRQSDGTMEPLP 231

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
              VDTG+G ER++++LQ+  SNY+ D+F  +  A  +ATGA     K           +
Sbjct: 232 KPSVDTGMGLERISAVLQHVNSNYEIDIFRDLIAAAAKATGATDLENK-----------S 280

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            RV+ADHIR+ +F ++DG  P NEGR YVLRRI+RRAVR+G  +L A+D FF  LV  ++
Sbjct: 281 LRVIADHIRSCAFLVSDGVIPSNEGRGYVLRRIIRRAVRHGY-MLGAKDTFFYKLVAPLI 339

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
           KVMG    EL +++A + +++  EE  F +TL +G++   +    ++G  L G+ AF L+
Sbjct: 340 KVMGPAADELARQQAMVEKVLKTEEEQFARTLERGLQLLDEELASLKGDTLDGEAAFRLY 399

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFP+DLT  +  ER + VD EGF  AM++ R R+R +    A      D ++   + 
Sbjct: 400 DTYGFPIDLTADVCRERNIKVDEEGFERAMEDQRRRARESSGFGA------DYNSLIKVD 453

Query: 527 KRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           KR        F    + + ++ I A+Y   + ++S+  G E  ++L  ++FYAE GGQ+ 
Sbjct: 454 KRS------EFSGYQYDEQQATITALYKDGQPVDSLNAGEEGLVILDKTAFYAESGGQVG 507

Query: 587 DEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
           D G++     SF V + Q YG  + HIG +   AG   V   +   VD  RR  I  NH+
Sbjct: 508 DTGYLNNDNASFKVTDTQKYGQAIGHIGKVE--AGSLVVNHRITAVVDSARRDAIRLNHS 565

Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD 706
            TH+L+ ALR+VLGDHV QKGS+V  + LRFDFSH + +  E LR++E IVN QI+   +
Sbjct: 566 ATHLLHAALRQVLGDHVSQKGSLVNDKYLRFDFSHFEAMTQEQLRQVEDIVNAQIRKNSE 625

Query: 707 VFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGG 766
           + ++   L  AK   G  A+FGE Y + VRV+++G                  S ELCGG
Sbjct: 626 IETELMDLEGAKA-KGAMALFGEKYEERVRVLSMG----------------DFSIELCGG 668

Query: 767 THLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEG--- 823
           TH   T +   F +LSE G A G+RRI A T  +A ++          +  A  ++G   
Sbjct: 669 THARRTGDIGLFRILSESGTAAGVRRIEATTGSMAIESIHNQSEQLSAI--AHLVKGDIN 726

Query: 824 SLLEK-----NQVRKAQKKVAE-ENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAA 877
           SL+EK     ++ R+ +K++ + ++ Q + + A+ +++A    G    ++++    D   
Sbjct: 727 SLVEKVKAALDKSRQLEKEIVQLKDQQASQESASLSSKAKDVKGIKLLVTQL-ADTDPKL 785

Query: 878 VREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGR 937
           +R  V  +  Q    ++V ST  + +K  +  GV   +D + +++  + ++     + G+
Sbjct: 786 LRTMVDDLKNQLKSAIIVLST-TSGDKVSMIVGVT--NDLTAKVKAGDLISYIASQVGGK 842

Query: 938 CGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
            G G+  +A   GTD + +  AM    E+   +L
Sbjct: 843 GG-GRPDMAQAGGTDVSALPAAMASVEEWVEARL 875


>gi|417812515|ref|ZP_12459175.1| alanyl-tRNA synthetase [Vibrio cholerae HC-49A2]
 gi|418354358|ref|ZP_12957082.1| alanyl-tRNA synthetase [Vibrio cholerae HC-61A1]
 gi|421319318|ref|ZP_15769877.1| alanyl-tRNA synthetase [Vibrio cholerae CP1038(11)]
 gi|421334360|ref|ZP_15784829.1| alanyl-tRNA synthetase [Vibrio cholerae CP1048(21)]
 gi|423159217|ref|ZP_17146190.1| alanyl-tRNA synthetase [Vibrio cholerae HC-33A2]
 gi|443530458|ref|ZP_21096474.1| alanyl-tRNA synthetase [Vibrio cholerae HC-7A1]
 gi|443534234|ref|ZP_21100148.1| alanyl-tRNA synthetase [Vibrio cholerae HC-80A1]
 gi|340043895|gb|EGR04852.1| alanyl-tRNA synthetase [Vibrio cholerae HC-49A2]
 gi|356450344|gb|EHI03073.1| alanyl-tRNA synthetase [Vibrio cholerae HC-33A2]
 gi|356454134|gb|EHI06789.1| alanyl-tRNA synthetase [Vibrio cholerae HC-61A1]
 gi|395925643|gb|EJH36440.1| alanyl-tRNA synthetase [Vibrio cholerae CP1038(11)]
 gi|395937469|gb|EJH48183.1| alanyl-tRNA synthetase [Vibrio cholerae CP1048(21)]
 gi|443458659|gb|ELT26054.1| alanyl-tRNA synthetase [Vibrio cholerae HC-7A1]
 gi|443462541|gb|ELT33578.1| alanyl-tRNA synthetase [Vibrio cholerae HC-80A1]
          Length = 858

 Score =  589 bits (1519), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 358/922 (38%), Positives = 515/922 (55%), Gaps = 80/922 (8%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR  F  FFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 5   EVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 59

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI++AWE LT V +L
Sbjct: 60  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQL 119

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           P +RL  T +          D+EA DIW K   +PA R++  G K        DNFW+MG
Sbjct: 120 PKERLLVTVY--------ETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMG 171

Query: 232 DTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKH 289
           DTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG+++PLP   
Sbjct: 172 DTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPS 231

Query: 290 VDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRV 349
           VDTG+G ER+++I+Q   SNY+ DVF  +  A   A G +           D  + + RV
Sbjct: 232 VDTGMGIERISAIMQGVHSNYEIDVFQTLIKAAADAIGYQ-----------DLTNQSLRV 280

Query: 350 VADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVM 409
           VADHIR+ +F I DG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF+ LV  + +VM
Sbjct: 281 VADHIRSCAFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGAFFHKLVGPLAEVM 339

Query: 410 GDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTY 469
           G    ELK+++A + +++  EE +FG+TL +G+     A   + G+VL G+  F L+DTY
Sbjct: 340 GTAGVELKKQQALVEKVLRIEEENFGRTLDRGMSILNDALDQLSGQVLDGETVFKLYDTY 399

Query: 470 GFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRG 529
           GFP DLT  +A ERG  +D  GF  AM+E R+R+R A      G    D +   +L K  
Sbjct: 400 GFPADLTNDVARERGFSIDEAGFEQAMEEQRQRAREA------GQFGTDYN---SLIKS- 449

Query: 530 VLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEG 589
             AT+  F        +SV++ ++     + ++  G++  IVL ++ FYAE GGQ  D G
Sbjct: 450 --ATNTEFCGYTASRGQSVVREMFVEGAEVSTLSAGDKAIIVLDNTPFYAESGGQCGDTG 507

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
            ++   G F+V + Q  G  + H G + +G    + G++V   VD  RR  I+ NH+ TH
Sbjct: 508 VLKTDAGIFHVEDTQKLGNAIAHHGVIAQGV--LATGDQVDAIVDEKRRAAISLNHSATH 565

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +L+ ALR+VLG+HV QKGS+V  E LRFDFSH + +    ++ +E +VN++++    + +
Sbjct: 566 LLHAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTAAEIKEVERLVNQEVRRNHSIET 625

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
               + EAK   G  A+FGE Y D VRV+++G                  S ELCGG H 
Sbjct: 626 NIMNIDEAKA-KGAMALFGEKYDDQVRVLSMG----------------DFSTELCGGIHA 668

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKN 829
           SNT +   F ++SE GIA GIRRI AVT   A    +A  +           +  LLEK 
Sbjct: 669 SNTGDIGLFKIISEGGIAAGIRRIEAVTGEGALDYLDAQQAQHDAKVSEMAAKAKLLEK- 727

Query: 830 QVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQK 889
           ++++ + K+A +     +    + A      G    ++++  G D  A+R  V  +  Q 
Sbjct: 728 EIQQLKDKLAAKESAGLINQVKQIA------GVNVLVAQLN-GADNKALRGMVDDLKNQL 780

Query: 890 GMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQ 949
              +++   +    K  + AGV   +D + +++  E +      + G+ G G+  +A   
Sbjct: 781 SSGIIMLG-NVAEGKVGLIAGVT--NDLTNKVKAGELVNMVALQVGGK-GGGRPDMAQAG 836

Query: 950 GTDAAQVTPAMDLAAEFAAMKL 971
           GTDA  +  A++    + A +L
Sbjct: 837 GTDAHALPSALESVDAWIAERL 858


>gi|419829094|ref|ZP_14352583.1| alanine--tRNA ligase [Vibrio cholerae HC-1A2]
 gi|422916260|ref|ZP_16950601.1| alanyl-tRNA synthetase [Vibrio cholerae HC-02A1]
 gi|423816218|ref|ZP_17715204.1| alanine--tRNA ligase [Vibrio cholerae HC-55C2]
 gi|423848281|ref|ZP_17718990.1| alanine--tRNA ligase [Vibrio cholerae HC-59A1]
 gi|423878860|ref|ZP_17722598.1| alanine--tRNA ligase [Vibrio cholerae HC-60A1]
 gi|423996680|ref|ZP_17739946.1| alanine--tRNA ligase [Vibrio cholerae HC-02C1]
 gi|424015381|ref|ZP_17755231.1| alanine--tRNA ligase [Vibrio cholerae HC-55B2]
 gi|424018492|ref|ZP_17758294.1| alanine--tRNA ligase [Vibrio cholerae HC-59B1]
 gi|424623862|ref|ZP_18062342.1| alanyl-tRNA synthetase [Vibrio cholerae HC-50A1]
 gi|424628438|ref|ZP_18066747.1| alanyl-tRNA synthetase [Vibrio cholerae HC-51A1]
 gi|424632397|ref|ZP_18070516.1| alanyl-tRNA synthetase [Vibrio cholerae HC-52A1]
 gi|424639396|ref|ZP_18077295.1| alanyl-tRNA synthetase [Vibrio cholerae HC-56A1]
 gi|424647556|ref|ZP_18085236.1| alanyl-tRNA synthetase [Vibrio cholerae HC-57A1]
 gi|443526415|ref|ZP_21092498.1| alanyl-tRNA synthetase [Vibrio cholerae HC-78A1]
 gi|341640780|gb|EGS65359.1| alanyl-tRNA synthetase [Vibrio cholerae HC-02A1]
 gi|408016147|gb|EKG53703.1| alanyl-tRNA synthetase [Vibrio cholerae HC-50A1]
 gi|408021235|gb|EKG58500.1| alanyl-tRNA synthetase [Vibrio cholerae HC-52A1]
 gi|408027103|gb|EKG64086.1| alanyl-tRNA synthetase [Vibrio cholerae HC-56A1]
 gi|408037031|gb|EKG73439.1| alanyl-tRNA synthetase [Vibrio cholerae HC-57A1]
 gi|408058939|gb|EKG93715.1| alanyl-tRNA synthetase [Vibrio cholerae HC-51A1]
 gi|408622283|gb|EKK95271.1| alanine--tRNA ligase [Vibrio cholerae HC-1A2]
 gi|408636889|gb|EKL09011.1| alanine--tRNA ligase [Vibrio cholerae HC-55C2]
 gi|408644154|gb|EKL15860.1| alanine--tRNA ligase [Vibrio cholerae HC-60A1]
 gi|408645266|gb|EKL16927.1| alanine--tRNA ligase [Vibrio cholerae HC-59A1]
 gi|408854585|gb|EKL94338.1| alanine--tRNA ligase [Vibrio cholerae HC-02C1]
 gi|408862028|gb|EKM01580.1| alanine--tRNA ligase [Vibrio cholerae HC-55B2]
 gi|408870038|gb|EKM09320.1| alanine--tRNA ligase [Vibrio cholerae HC-59B1]
 gi|443455264|gb|ELT19048.1| alanyl-tRNA synthetase [Vibrio cholerae HC-78A1]
          Length = 860

 Score =  589 bits (1519), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 360/922 (39%), Positives = 517/922 (56%), Gaps = 80/922 (8%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR  F  FFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI++AWE LT V +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           P +RL  T +          D+EA DIW K   +PA R++  G K        DNFW+MG
Sbjct: 122 PKERLLVTVY--------ETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKH 289
           DTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG+++PLP   
Sbjct: 174 DTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPS 233

Query: 290 VDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRV 349
           VDTG+G ER+++I+Q   SNY+ DVF  +   I+ A GA  Y         D  + + RV
Sbjct: 234 VDTGMGIERISAIMQGVHSNYEIDVFQTL---IKAAAGAIGYQ--------DLTNQSLRV 282

Query: 350 VADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVM 409
           VADHIR+ +F I DG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF+ LV  + +VM
Sbjct: 283 VADHIRSCAFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGAFFHKLVGPLAEVM 341

Query: 410 GDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTY 469
           G    ELK+++A + +++  EE +FG+TL +G+     A   + G+VL G+  F L+DTY
Sbjct: 342 GTAGVELKKQQALVEKVLRIEEENFGRTLDRGMSILNDALDQLSGQVLDGETVFKLYDTY 401

Query: 470 GFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRG 529
           GFP DLT  +A ERG  +D  GF  AM+E R+R+R A      G    D +   +L K  
Sbjct: 402 GFPADLTNDVARERGFSIDEAGFEQAMEEQRQRAREA------GQFGTDYN---SLIKS- 451

Query: 530 VLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEG 589
             +T+  F        +SV++ ++     + ++  G++  IVL ++ FYAE GGQ  D G
Sbjct: 452 --STNTEFCGYTASRGQSVVREMFVEGAEVSTLSAGDKAIIVLDNTPFYAESGGQCGDTG 509

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
            ++   G F+V + Q  G  + H G L +G    + G++V   VD  RR  I+ NH+ TH
Sbjct: 510 VLKTDAGIFHVEDTQKLGNAIAHHGVLAQGV--LATGDQVDAIVDEKRRAAISLNHSATH 567

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +L+ ALR+VLG+HV QKGS+V  E LRFDFSH + +    ++ +E +VN++++    + +
Sbjct: 568 LLHAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTAAEIKEVERLVNQEVRRNHSIET 627

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
               + EAK   G  A+FGE Y D VRV+++G                  S ELCGG H 
Sbjct: 628 NIMNIDEAKA-KGAMALFGEKYDDQVRVLSMG----------------DFSTELCGGIHA 670

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKN 829
           SNT +   F ++SE GIA GIRRI AVT   A    +A  +           +  LLEK 
Sbjct: 671 SNTGDIGLFKIISEGGIAAGIRRIEAVTGEGALDYLDAQQAQHDAKVSEMAAKAKLLEK- 729

Query: 830 QVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQK 889
           ++++ + K+A +     +    + A      G    ++++  G D  A+R  V  +  Q 
Sbjct: 730 EIQQLKDKLAAKESAGLINQVKQIA------GVNVLVAQLN-GADNKALRGMVDDLKNQL 782

Query: 890 GMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQ 949
              +++   +    K  + AGV   +D + +++  E +      + G+ G G+  +A   
Sbjct: 783 SSGIIMLG-NVAEGKVGLIAGVT--NDLTNKVKAGELVNMVALQVGGK-GGGRPDMAQAG 838

Query: 950 GTDAAQVTPAMDLAAEFAAMKL 971
           GTDA  +  A++    + A +L
Sbjct: 839 GTDAHALPSALESVDAWIAERL 860


>gi|390949162|ref|YP_006412921.1| alanyl-tRNA synthetase [Thiocystis violascens DSM 198]
 gi|390425731|gb|AFL72796.1| alanyl-tRNA synthetase [Thiocystis violascens DSM 198]
          Length = 868

 Score =  589 bits (1519), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 361/918 (39%), Positives = 518/918 (56%), Gaps = 79/918 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R +F  +F  + H    SSP+VP NDPTLLF NAGM Q+K +FLG      Q    
Sbjct: 4   SAELRASFLDYFAQRQHERVASSPLVPANDPTLLFTNAGMVQFKEVFLGRERRAYQ---- 59

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            RA ++Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK EAI +AW+ LT+  
Sbjct: 60  -RAVSSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIGFAWDYLTREL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL---PASRVLPFGCKDNFWEMGDTGPC 236
            LP ++L+ T F          D+EA  IWL  +   PA R    G KDNFW MG+TGPC
Sbjct: 119 ALPPEKLWITVF--------TEDDEAAAIWLNEIGIDPA-RFSRCGAKDNFWSMGETGPC 169

Query: 237 GPCSEIHYDRTGNRDAASLVNND--DPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           GPCSEI YD           + D      +EIWN+VF+QFNR++DG+L PLP   VDTG+
Sbjct: 170 GPCSEIFYDHGPEIPGGPPGSPDAEGDRYVEIWNLVFMQFNRDADGNLTPLPRPSVDTGM 229

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           G ERL +++Q   SNYD D+F  + DA  Q TG            AD+ D + RV+ADHI
Sbjct: 230 GLERLAAVMQGVHSNYDIDLFRRLIDAAAQVTGC-----------ADRADKSLRVIADHI 278

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R+ +F I DG  PGNEGR YVLRRI+RRA+R+G   L   + FF+ LV  +V  MG  +P
Sbjct: 279 RSAAFLIVDGVTPGNEGRGYVLRRIMRRAIRHGYR-LGCAEPFFHRLVTPLVTEMGAAYP 337

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLD 474
           EL   +A +  I+  EE  F +TL  G+    +A   +    + G+  F L+DT+GFP D
Sbjct: 338 ELLTSQAQVERIVLLEEERFAETLEHGMRILDEAIAGLADDRIPGETVFKLYDTFGFPTD 397

Query: 475 LTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATD 534
           LT  +A ERGL +D++GF+ AM + +ER+R+A   Q G    +D           +    
Sbjct: 398 LTADIARERGLSLDMDGFDAAMGQQKERARAA--SQFGATQTLDIQ---------IQGET 446

Query: 535 DSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGL 594
           D   +   ++  +V+ A+Y      +++    E   +L  + FY E GGQI D G++   
Sbjct: 447 DFCGYERLREEATVV-ALYCNGVSRDTLDADEEGLAILDLTPFYGESGGQIGDRGWLTAE 505

Query: 595 FGSFYVRNVQIYG-GFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNF 653
            G F V + Q  G G VIHIG +TE  G+ +VG+ +  +VD +RR  IA NH+ TH+L+ 
Sbjct: 506 TGRFEVLDTQKKGEGVVIHIGRVTE--GQLAVGDRIDARVDAERRSAIALNHSATHLLHA 563

Query: 654 ALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEAT 713
           ALR+VLG+HV QKGS+V PE+LRFDFSH +PV  E L  IE +VN +++A   V ++   
Sbjct: 564 ALRQVLGEHVQQKGSLVGPERLRFDFSHFEPVTREQLLTIERLVNREVRANHLVETRIMN 623

Query: 714 LAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTR 773
           L +AK  +G  A+FGE Y + VRV+ +G                  S ELCGGTH+    
Sbjct: 624 LEDAKA-SGAVALFGEKYSEQVRVLRMG----------------DFSTELCGGTHVKAVG 666

Query: 774 EAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEA--------ACSLEKEVDDASKIEGSL 825
           +     +L+E GIA G+RRI A T  +A  + EA        A  L+   +D  +    L
Sbjct: 667 DIGLVKILAEGGIASGVRRIEAATGAVALDSVEADEDRLLRLAGLLKGGREDVDERVMQL 726

Query: 826 LEKNQVRKAQKKVAEENLQKAVKVATETA-EAAASNGKPFCISRVEVGLDAAAVREAVLK 884
           +E+   R+ +K++ +   + A     + A +A    G     +R++ G D  ++R  + +
Sbjct: 727 MER--ARRLEKELEQIKSKLASSAGQDLASQAVLVEGVKVLAARLD-GADPKSLRTTLDQ 783

Query: 885 VIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGG 944
           + ++ G  V+V +T E+  K  + AGV +  D + +L+  E L   +    G  G G+  
Sbjct: 784 IKDKLGSAVVVLAT-ESDGKVSLVAGVTK--DLTDRLKAGE-LIGLVAGKVGGKGGGRPD 839

Query: 945 LASGQGTDAAQVTPAMDL 962
           +A   G D A +  A++L
Sbjct: 840 MAQAGGNDPAGLPAALEL 857


>gi|28869047|ref|NP_791666.1| alanyl-tRNA synthetase [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|37999391|sp|Q885J0.1|SYA_PSESM RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|28852287|gb|AAO55361.1| alanyl-tRNA synthetase [Pseudomonas syringae pv. tomato str.
           DC3000]
          Length = 874

 Score =  589 bits (1519), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 362/931 (38%), Positives = 523/931 (56%), Gaps = 88/931 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F  FFE++ H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLGFFEEQGHTRVPSSSLIPGNDPTLLFTNAGMNQFKDCFLGQ-----EKRAY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           TRA  +QKC+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AW  LT  K
Sbjct: 58  TRAVTSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAITYAWTFLTSEK 117

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFW 228
              LP ++L+ T +        A D+EA DIW K +  PA R++  G         DNFW
Sbjct: 118 WLNLPKEKLWVTVY--------ATDDEAYDIWTKEIGVPAERMVRIGDNKGAPYASDNFW 169

Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
            MGDTGPCGPCSEI +D   +           D    IEIWN VF+QFNR +DG L PLP
Sbjct: 170 TMGDTGPCGPCSEIFFDHGADIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLP 229

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
           A  VDTG+G ER++++LQ+  SNY+ D+F  +  A   A G            ++    +
Sbjct: 230 APSVDTGMGLERVSAVLQHVHSNYEIDLFQSLLTASANAIGC-----------SNDNQAS 278

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            +VVADHIR+  F IADG  P +EGR YVLRRI+RRA R+G++ L A+  FF  +V  +V
Sbjct: 279 LKVVADHIRSCGFLIADGVLPSSEGRGYVLRRIIRRACRHGNK-LGAKGSFFYQIVAALV 337

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
             MG  FPEL Q+++HI  ++  EE  F KTL +G++  ++   +++G V+ G+  F L+
Sbjct: 338 AEMGSAFPELVQQQSHIERVLRGEEEQFAKTLEQGLKIIEQDLAELKGTVVPGEIVFKLY 397

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFP+DLT  +A ER L +D EGF   M+  R R+RSA       +  MD ++     
Sbjct: 398 DTYGFPMDLTGDIARERNLTLDEEGFEREMEAQRVRARSAS------SFGMDYNS----- 446

Query: 527 KRGVLATDDSFKFIWFQ--DHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
              ++  D + +F  +      + + A+Y   + +  +  G E  ++L ++ FYAE GGQ
Sbjct: 447 ---LVKVDVATQFTGYSATTGSASVVALYKDGQSVTHLNAGEEGVVILDTTPFYAESGGQ 503

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           I D GF+      F V +    GG  +H G +  G+   SVG +V  +V  + R     N
Sbjct: 504 IGDSGFLLAGDARFDVSDTTKTGGAFLHHGVVASGS--LSVGVQVETQVADEVRDATKLN 561

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ ALR+VLG+HV QKGS+V  ++LRFDFSH + + PE LR +E IVN +I+  
Sbjct: 562 HSATHLLHAALRQVLGEHVQQKGSLVDSQRLRFDFSHFESIKPEQLRALEDIVNAEIRKN 621

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
             V ++E  +  AK   G  A+FGE Y D VRV+++G +                S ELC
Sbjct: 622 TPVVTEETDIDTAKK-KGAMALFGEKYGDSVRVLSMGGE---------------FSVELC 665

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEG- 823
           GG H S T +   F ++SE G+A G+RRI AVT   A     +A    KE   A+ ++G 
Sbjct: 666 GGIHASRTGDISLFKIVSEGGVAAGVRRIEAVTGAAALAWLNSAEDQLKEA--ATLVKGN 723

Query: 824 --SLLEKNQVRKAQKKVAEENLQ----KAVKVATETAEAAASN--GKPFCISRVEVGLDA 875
             +LL+K      + ++ E+ L+    KA   A +   +AA +  G     +R++ G D 
Sbjct: 724 RDNLLDKLTAVLERNRLLEKQLEQLQAKAASAAGDDLSSAALDVKGVKVLATRLD-GQDG 782

Query: 876 AAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLK 935
            A+   V ++  + G  V++  +    +K V+ AGV +  D + QL+  + +  A   + 
Sbjct: 783 KALLALVDQLKNKLGRAVILLGSVH-EDKVVLVAGVTK--DLTGQLKAGDLMKQAATAVG 839

Query: 936 GRCGKGKGGLASGQGTDAAQVTPAMDLAAEF 966
           G+ G G+  +A G G DA  +  A+ LA  F
Sbjct: 840 GK-GGGRPDMAQGGGVDATALDSALALAVPF 869


>gi|313145280|ref|ZP_07807473.1| alanyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313134047|gb|EFR51407.1| alanyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
          Length = 872

 Score =  589 bits (1519), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 329/747 (44%), Positives = 442/747 (59%), Gaps = 61/747 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A + RD+F  FFE K H    S+P+V  +DPTL+F NAGMNQ+K I LG        +K 
Sbjct: 4   AKETRDSFKNFFESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGN-----HPAKY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWE L  V 
Sbjct: 59  HRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAWEYLVDVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +L  + LYAT F G  + GL  DNEA  IW +FLP   ++     DNFWEMGDTGPCGPC
Sbjct: 119 KLNPEHLYATVFEGSPEEGLERDNEAASIWEQFLPKDHIINGNKHDNFWEMGDTGPCGPC 178

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + A      LVN+D P  IEIWN+VF+Q+NR++D SL+PLPAK +DTG+
Sbjct: 179 SEIHIDLRPAEERAKISGRDLVNHDHPQVIEIWNLVFMQYNRKADSSLEPLPAKVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF P+  +I Q  G      + G ++ +  D+A RV+ADHI
Sbjct: 239 GFERLCMALQGKTSNYDTDVFQPLIKSIAQMAGT-----EYGKNEQN--DIAMRVIADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++F+I DG  P N    YV+RRILRRAVRYG   L  +  F   L+ +++  MGD +P
Sbjct: 292 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLIDSMGDAYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ--GKV-LSGQDAFILWDTYGF 471
           EL  ++  I ++I  EE SF +TL  GI    K   D +  GK  +SG+DAF L+DT+GF
Sbjct: 352 ELIAQKELIEKVIKEEEESFLRTLETGIRLLDKTMADTKATGKTEISGKDAFTLYDTFGF 411

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E G+ V+   F+  M + ++R+R+A   + G  I++    T  +   G  
Sbjct: 412 PLDLTELILRENGMTVNTVEFDAEMQQQKQRARNAAAIETGDWIILKEGTTEFV---GYD 468

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            T+     + ++  K   + +Y                IVL  + FYAE GGQ+ D G +
Sbjct: 469 YTEYETSILRYRQVKQKNQTLYQ---------------IVLDYTPFYAESGGQVGDTGVL 513

Query: 592 EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHML 651
              F +  V + +      IHI   T+          + C V+ D+R   A NH+ TH+L
Sbjct: 514 VSEFETIEVIDTKKENNLPIHI---TKKLPEHPEAPMMAC-VNTDKRAACAANHSATHLL 569

Query: 652 NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS-K 710
           + ALREVLG+HV+QKGS+V P+ LRFDFSH + V  E LR++E +VN +I+A + +   +
Sbjct: 570 DEALREVLGEHVEQKGSLVTPDSLRFDFSHFQKVTDEELRKVEHLVNAKIRANVPLQEHR 629

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
              + EAK + G  A+FGE Y D VRV+  G                  S E CGGTH++
Sbjct: 630 NIPIEEAKEL-GAIALFGEKYGDHVRVIQFGS-----------------SIEFCGGTHVA 671

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVT 797
            T       ++SE  +A G+RRI A T
Sbjct: 672 ATGNIGMVKIISESSVAAGVRRIEAYT 698


>gi|429120426|ref|ZP_19181103.1| Alanyl-tRNA synthetase [Cronobacter sakazakii 680]
 gi|426325169|emb|CCK11840.1| Alanyl-tRNA synthetase [Cronobacter sakazakii 680]
          Length = 875

 Score =  589 bits (1519), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 364/930 (39%), Positives = 516/930 (55%), Gaps = 81/930 (8%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  + +
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQYAWELLTGEQWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP DRL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 NLPKDRLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNY+ D+F  +  A+   TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYEIDLFQKLIKAVANVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRA+R+G+ +L A+D FF  LV  +V V
Sbjct: 283 VIADHIRSCAFLIADGVIPSNENRGYVLRRIIRRAIRHGN-MLGAKDTFFYKLVGPLVDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    ELK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGAAGEELKRQQAQVEQVLKTEEEQFARTLERGLALLDEELSKLTGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R +            AD  A +   
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSG--------FGADYNAMIRVD 453

Query: 529 GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDE 588
           G       FK     +  + + A++   + +E V  G +  +VL  + FYAE GGQ+ D+
Sbjct: 454 GA----SEFKGYDHTELTAKVTALFVDGKSVEQVTAGQQAVVVLDETPFYAESGGQVGDK 509

Query: 589 GFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
           G ++G   +F V + Q YG  + HIG L  G     VGE V  +VD+ RR  I  NH+ T
Sbjct: 510 GELKGNGFTFTVNDTQKYGQAIGHIGELASGV--LKVGEGVKAEVDHARRDRIRLNHSAT 567

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R++E +VN QI+  L + 
Sbjct: 568 HLMHAALRQVLGTHVAQKGSLVNDKGLRFDFSHFEAMKPEEIRKVEDLVNAQIRRNLPIE 627

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
           +    L  AK   G  A+FGE Y D VRV+++G                  S ELCGG H
Sbjct: 628 TNVMDLETAKA-KGAMALFGEKYEDRVRVLSMG----------------DFSTELCGGIH 670

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEK 828
            S T +   F ++SE G A G+RRI AVT   A     A      E+    K +   L  
Sbjct: 671 ASRTGDIGLFRIVSESGTAAGVRRIEAVTGEGALSLVHAQNDRLNELSHLLKSDSQTLND 730

Query: 829 N------QVRKAQKKVAEENLQKAVK-VATETAEAAASNGKPFCISRVEVGLDAAAVREA 881
                  + R+ +K++ +   Q+A +  A  +++A   NG    +S +  G++   +R  
Sbjct: 731 KVRAMVERTRQLEKELQQLKEQQAAQESANLSSKAVDINGVKLLVSEL-AGVEPKMLRTM 789

Query: 882 VLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKG 941
           V  +  Q G  V+V +T     K  + AGV +  D + +++  E +    Q + G+ G G
Sbjct: 790 VDDLKNQLGSSVIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELVGMIAQQVGGKGG-G 845

Query: 942 KGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           +  +A   GTDAA +  A+     +   KL
Sbjct: 846 RPDMAQAGGTDAAALPAALGSVESWVTAKL 875


>gi|398943278|ref|ZP_10670763.1| alanine--tRNA ligase [Pseudomonas sp. GM41(2012)]
 gi|398159407|gb|EJM47709.1| alanine--tRNA ligase [Pseudomonas sp. GM41(2012)]
          Length = 874

 Score =  589 bits (1519), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 357/893 (39%), Positives = 505/893 (56%), Gaps = 89/893 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F +FFE++ H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLRFFEEQGHTRVASSSLIPGNDPTLLFTNAGMNQFKDCFLGQ-----EKRAY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           TRA ++QKC+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AW  LT  +
Sbjct: 58  TRAVSSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAITYAWNFLTSDQ 117

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFW 228
              LP ++L+ T +        A D+EA DIW K +  PA R++  G         DNFW
Sbjct: 118 WLNLPKEKLWVTVY--------ASDDEAYDIWTKEIGVPAERMVRIGDNKGAPYASDNFW 169

Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
            MGDTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG L PLP
Sbjct: 170 TMGDTGPCGPCTEIFYDHGADIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLP 229

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
           A  VDTG+G ER++++LQ+  SNY+ D+F  +  A  +A G             +    +
Sbjct: 230 APSVDTGMGLERISAVLQHVHSNYEIDLFQSLLSASAKAIGC-----------TNDNQAS 278

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            +VVADHIR+  F IADG  P NEGR YVLRRI+RRA R+G++ L A+  FF  +V  +V
Sbjct: 279 LKVVADHIRSCGFLIADGVLPSNEGRGYVLRRIIRRACRHGNK-LGAKGSFFYQIVAALV 337

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
             MG+ FPELK ++AHI  ++ AEE  F KTL +G++  ++   D++G V+ G   F L+
Sbjct: 338 AEMGEAFPELKSQQAHIERVLKAEEEQFAKTLEQGLKILEQDLADLKGDVVPGDVVFKLY 397

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFP+DLT  +A ER L +D EGF   M+  R R+RSA       +  MD ++     
Sbjct: 398 DTYGFPMDLTGDIARERSLTIDEEGFEREMEAQRVRARSAS------SFGMDYNS----- 446

Query: 527 KRGVLATDDSFKFIWFQDHKSVIK--AIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
              ++  D + +F  +  H    K  A+Y   + ++++  G E  +VL  + FYAE GGQ
Sbjct: 447 ---LVKVDVATEFTGYTAHSGSAKIVALYKDGQSVDALSEGEEGVVVLNQTPFYAESGGQ 503

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           I D GF++     F VR+    GG  +H G L  G+    VG  V   VD + R   + N
Sbjct: 504 IGDCGFLQAGAARFDVRDTTKTGGAFLHHGVLDSGS--LIVGAPVETHVDAEVRHATSLN 561

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ ALR+VLGDHV QKGS+V  ++LRFDFSH + + PE L+ +E IVN +I+  
Sbjct: 562 HSATHLLHAALRQVLGDHVQQKGSLVDSQRLRFDFSHFEAIKPEQLKALEDIVNAEIRKN 621

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
            +V ++E  +  AK   G  A+FGE Y D VRV+++G                  S ELC
Sbjct: 622 SEVETEETDIEAAKQ-KGAMALFGEKYGDNVRVLSMGG---------------DFSVELC 665

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAF--------EAACSLEKEVD 816
           GG H S T +     ++SE G+A G+RRI AVT   A            EAA  ++   D
Sbjct: 666 GGIHASRTGDIGLLKIISEGGVASGVRRIEAVTGAAALAYLNAAEEQLKEAANLVKGSRD 725

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQ-KAVKVATETAEAAASNGKPFCISRVEV-GLD 874
           +      ++LE+N++ + Q     E LQ KA   A +   A+A + K   +  V + G D
Sbjct: 726 NLIDKLSAVLERNRLLEKQL----EQLQAKAASAAGDDLSASALDVKGVKVLAVRLDGQD 781

Query: 875 AAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWL 927
             A+   V ++  + G  V++  +     K V+ AGV +  D + QL+  + +
Sbjct: 782 GKALLALVDQLKNKLGRAVILLGSVH-EEKVVLVAGVTK--DLTGQLKAGDLM 831


>gi|383120331|ref|ZP_09941060.1| alanyl-tRNA synthetase [Bacteroides sp. 1_1_6]
 gi|251840627|gb|EES68709.1| alanyl-tRNA synthetase [Bacteroides sp. 1_1_6]
          Length = 872

 Score =  589 bits (1519), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 326/747 (43%), Positives = 445/747 (59%), Gaps = 61/747 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++RD+F  FFE K H    S+P+V  +DPTL+F NAGMNQ+K I LG        +K 
Sbjct: 4   AKEIRDSFKNFFETKGHHIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGN-----HPAKY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWE L +V 
Sbjct: 59  HRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAINWAWEYLVEVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +L  + LYAT F G  + GL+ D+EA   W ++LP   ++     DNFWEMGDTGPCGPC
Sbjct: 119 KLNPEHLYATVFEGSPEEGLSRDDEAASYWEQYLPKDHIINGNKHDNFWEMGDTGPCGPC 178

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + A      LVN+D P  IEIWN+VF+Q+NR++DGSL+PLPAK +DTG+
Sbjct: 179 SEIHIDLRPAEERAKISGRDLVNHDHPQVIEIWNLVFMQYNRKADGSLEPLPAKVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF P+  AI   +G      + G D   + D+A RV+ADHI
Sbjct: 239 GFERLCMALQGKTSNYDTDVFQPMLKAIAAMSGT-----EYGKD--KQQDIAMRVIADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++F+I DG  P N    YV+RRILRRAVRYG   L+ +  F   L+ +++  MGD +P
Sbjct: 292 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLEQKQSFMYKLLPVLIDNMGDAYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ--GKV-LSGQDAFILWDTYGF 471
           EL  ++  I ++I  EE +F +TL  GI    K   D +  GK  +SG+DAF L+DT+GF
Sbjct: 352 ELIAQKGLIEKVIKEEEEAFLRTLETGIRLLDKTMGDTKAAGKTEISGKDAFTLYDTFGF 411

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E G+ V+IE FN  M + ++R+R+A   + G  + +    T  +   G  
Sbjct: 412 PLDLTELILRENGMTVNIEEFNTEMQQQKQRARNAAAIETGDWVTLREGTTEFV---GYD 468

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            T+     + ++  K   + +Y                IVL  + FYAE GGQ+ D G +
Sbjct: 469 YTEYEASILRYRQIKQKNQTLYQ---------------IVLDCTPFYAESGGQVGDTGVL 513

Query: 592 EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHML 651
              F +  V + +      IHI   T+          + C VD D+R   A NH+ TH+L
Sbjct: 514 VSEFETIEVIDTKKENNLPIHI---TKKLPEHPEAPMMAC-VDTDKRAACAANHSATHLL 569

Query: 652 NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS-K 710
           + ALREVLG+H++QKGS+V P+ LRFDFSH + V  E +R++E +VN +I+A + +   +
Sbjct: 570 DSALREVLGEHIEQKGSLVTPDSLRFDFSHFQKVTDEEIRQVEHLVNAKIRANIPLKEYR 629

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
              + EAK + G  A+FGE Y + VRV+  G                  S E CGG H++
Sbjct: 630 NIPIEEAKEL-GAIALFGEKYGERVRVIQFGS-----------------SIEFCGGIHVA 671

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVT 797
            T       ++SE  +A G+RRI A T
Sbjct: 672 ATGNIGMVKIISESSVAAGVRRIEAYT 698


>gi|421342181|ref|ZP_15792588.1| alanyl-tRNA synthetase [Vibrio cholerae HC-43B1]
 gi|395945684|gb|EJH56349.1| alanyl-tRNA synthetase [Vibrio cholerae HC-43B1]
          Length = 858

 Score =  589 bits (1519), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 358/922 (38%), Positives = 515/922 (55%), Gaps = 80/922 (8%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR  F  FFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 5   EVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 59

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI++AWE LT V +L
Sbjct: 60  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQL 119

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           P +RL  T +          D+EA DIW K   +PA R++  G K        DNFW+MG
Sbjct: 120 PKERLLVTVY--------ETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMG 171

Query: 232 DTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKH 289
           DTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG+++PLP   
Sbjct: 172 DTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPS 231

Query: 290 VDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRV 349
           VDTG+G ER+++I+Q   SNY+ DVF  +  A   A G +           D  + + RV
Sbjct: 232 VDTGMGIERISAIMQGVHSNYEIDVFQTLIKAAADAIGYQ-----------DLTNQSLRV 280

Query: 350 VADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVM 409
           VADHIR+ +F I DG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF+ LV  + +VM
Sbjct: 281 VADHIRSCAFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGAFFHKLVGPLAEVM 339

Query: 410 GDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTY 469
           G    ELK+++A + +++  EE +FG+TL +G+     A   + G+VL G+  F L+DTY
Sbjct: 340 GTAGVELKKQQALVEKVLRIEEENFGRTLDRGMSILNDALDQLSGQVLDGETVFKLYDTY 399

Query: 470 GFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRG 529
           GFP DLT  +A ERG  +D  GF  AM+E R+R+R A      G    D +   +L K  
Sbjct: 400 GFPADLTNDVARERGFSIDEAGFEQAMEEQRQRAREA------GQFGTDYN---SLIKS- 449

Query: 530 VLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEG 589
             +T+  F        +SV++ ++     + ++  G++  IVL ++ FYAE GGQ  D G
Sbjct: 450 --STNTEFCGYTASRGQSVVREMFVEGAEVSTLSAGDKAIIVLDNTPFYAESGGQCGDTG 507

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
            ++   G F+V + Q  G  + H G L +G    + G++V   VD  RR  I+ NH+ TH
Sbjct: 508 VLKTDAGIFHVEDTQKLGNAIAHHGVLAQGV--LATGDQVDAIVDEKRRAAISLNHSATH 565

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +L+ ALR+VLG+HV QKGS+V  E LRFDFSH + +    ++ +E +VN++++    + +
Sbjct: 566 LLHAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTAAEIKEVERLVNQEVRRNHSIET 625

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
               + EAK   G  A+FGE Y D VRV+++G                  S ELCGG H 
Sbjct: 626 NIMNIDEAKA-KGAMALFGEKYDDQVRVLSMG----------------DFSTELCGGIHA 668

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKN 829
           SNT +   F ++SE GIA GIRRI AVT   A    +A  +           +  LLEK 
Sbjct: 669 SNTGDIGLFKIISEGGIAAGIRRIEAVTGEGALDYLDAQQAQHDAKVSEMAAKAKLLEK- 727

Query: 830 QVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQK 889
           ++++ + K+A +     +    + A      G    ++++  G D  A+R  V  +  Q 
Sbjct: 728 EIQQLKDKLAAKESAGLINQVKQIA------GVNVLVAQLN-GADNKALRGMVDDLKNQL 780

Query: 890 GMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQ 949
              +++   +    K  + AGV   +D + +++  E +      + G+ G G+  +A   
Sbjct: 781 SSGIIMLG-NVAEGKVGLIAGVT--NDLTNKVKAGELVNMVALQVGGK-GGGRPDMAQAG 836

Query: 950 GTDAAQVTPAMDLAAEFAAMKL 971
           GTDA  +  A++    + A +L
Sbjct: 837 GTDAHALPSALESVDAWIAERL 858


>gi|417792180|ref|ZP_12439571.1| alanyl-tRNA synthetase [Cronobacter sakazakii E899]
 gi|449307106|ref|YP_007439462.1| alanyl-tRNA ligase [Cronobacter sakazakii SP291]
 gi|333953744|gb|EGL71655.1| alanyl-tRNA synthetase [Cronobacter sakazakii E899]
 gi|449097139|gb|AGE85173.1| alanyl-tRNA ligase [Cronobacter sakazakii SP291]
          Length = 875

 Score =  589 bits (1519), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 364/930 (39%), Positives = 516/930 (55%), Gaps = 81/930 (8%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  + +
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQYAWELLTGAQWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP DRL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 NLPKDRLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNY+ D+F  +  A+   TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYEIDLFQKLIKAVANVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRA+R+G+ +L A+D FF  LV  +V V
Sbjct: 283 VIADHIRSCAFLIADGVIPSNENRGYVLRRIIRRAIRHGN-MLGAKDTFFYKLVGPLVDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    ELK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGAAGEELKRQQAQVEQVLKTEEEQFARTLERGLALLDEELSKLTGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R +            AD  A +   
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSG--------FGADYNAMIRVD 453

Query: 529 GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDE 588
           G       FK     +  + + A++   + +E V  G +  +VL  + FYAE GGQ+ D+
Sbjct: 454 GA----SEFKGYDHTELTAKVTALFVDGKSVEQVTAGQQAVVVLDETPFYAESGGQVGDK 509

Query: 589 GFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
           G ++G   +F V + Q YG  + HIG L  G     VGE V  +VD+ RR  I  NH+ T
Sbjct: 510 GELKGNGFTFTVNDTQKYGQAIGHIGELASGV--LKVGEGVKAEVDHARRDRIRLNHSAT 567

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R++E +VN QI+  L + 
Sbjct: 568 HLMHAALRQVLGTHVAQKGSLVNDKGLRFDFSHFEAMKPEEIRKVEDLVNAQIRRNLPIE 627

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
           +    L  AK   G  A+FGE Y D VRV+++G                  S ELCGG H
Sbjct: 628 TNVMDLEAAKA-KGAMALFGEKYEDRVRVLSMG----------------DFSTELCGGIH 670

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEK 828
            S T +   F ++SE G A G+RRI AVT   A     A      E+    K +   L  
Sbjct: 671 ASRTGDIGLFRIVSESGTAAGVRRIEAVTGEGALSLVHAQNDRLNELSHLLKSDSQTLND 730

Query: 829 N------QVRKAQKKVAEENLQKAVK-VATETAEAAASNGKPFCISRVEVGLDAAAVREA 881
                  + R+ +K++ +   Q+A +  A  +++A   NG    +S +  G++   +R  
Sbjct: 731 KVRAMVERTRQLEKELQQLKEQQAAQESANLSSKAVDINGVKLLVSEL-AGVEPKMLRTM 789

Query: 882 VLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKG 941
           V  +  Q G  V+V +T     K  + AGV +  D + +++  E +    Q + G+ G G
Sbjct: 790 VDDLKNQLGSSVIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELVGMIAQQVGGKGG-G 845

Query: 942 KGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           +  +A   GTDAA +  A+     +   KL
Sbjct: 846 RPDMAQAGGTDAAALPAALGSVESWVTAKL 875


>gi|90408728|ref|ZP_01216876.1| alanyl-tRNA synthetase [Psychromonas sp. CNPT3]
 gi|90310179|gb|EAS38316.1| alanyl-tRNA synthetase [Psychromonas sp. CNPT3]
          Length = 869

 Score =  589 bits (1518), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 351/910 (38%), Positives = 513/910 (56%), Gaps = 85/910 (9%)

Query: 61  TKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLT 120
           +++R  F  FF +K H    SS +VP NDPTLLF NAGMNQ+K  FLG+     +     
Sbjct: 8   SEIRQGFLDFFANKGHQVVSSSSLVPANDPTLLFTNAGMNQFKDTFLGS-----EQRSYV 62

Query: 121 RACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYR 180
           RA ++Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT    
Sbjct: 63  RATSSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAISFAWEYLTVELG 122

Query: 181 LPADRLYATYFGGDEKAGLAPDNEARDIWLKFL---PA--SRVLPFGCKDNFWEMGDTGP 235
           LP ++L+ T +          D EA  IW++ +   PA  SR+   G KDNFW MGDTGP
Sbjct: 123 LPKEKLWITVYD--------KDPEAEKIWIEEIGVDPACLSRI---GAKDNFWSMGDTGP 171

Query: 236 CGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTG 293
           CGPC+EI YD   +           D    IEIWN+VF+Q+NR +DG++  LP   VDTG
Sbjct: 172 CGPCTEIFYDHGEHIWGGPPGTPEEDGDRYIEIWNLVFMQYNRHADGTMVDLPKPSVDTG 231

Query: 294 LGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADH 353
           +G ER+++ILQN  SNY+ D+F  +   + + TGA            D  D + RVVADH
Sbjct: 232 MGLERISAILQNCHSNYEIDLFQALIKKVAEVTGA-----------TDLEDKSLRVVADH 280

Query: 354 IRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVF 413
           IR+  F I DG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF  +   ++  MGD +
Sbjct: 281 IRSCGFLICDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGVFFFKIYGELILQMGDTY 339

Query: 414 PELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPL 473
           PEL ++   + +I+  EE  F KTL++G++    A + ++G V+SG+  F L+DTYGFP 
Sbjct: 340 PELGKQRDFVEKILRLEEEQFAKTLVRGLQILDNALESLEGNVISGETVFKLYDTYGFPA 399

Query: 474 DLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLAT 533
           DLT  +A ER L++DI+GFN  MDE R R++               D     +  G L  
Sbjct: 400 DLTADIARERDLIIDIDGFNTLMDEQRTRAKK-------------VDHFGTDYNDG-LKF 445

Query: 534 DDSFKFIWFQ--DHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
           D+  +F+ ++   H + +  +    E + ++  G    ++L  + FYAE GGQ+ D G +
Sbjct: 446 DEKTQFLGYEHLQHSATVSILVKEGELVPALNQGEHGHVILKQTPFYAESGGQVGDSGRL 505

Query: 592 EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHML 651
               G F V + +  G   +HIG +   +G  SV +E+I +VD +RRK IA +H+ TH+L
Sbjct: 506 VLKDGIFNVTDTKKSGDTFLHIGYVE--SGNISVHDEIIAEVDSERRKAIALHHSATHLL 563

Query: 652 NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKE 711
           + ALR+ LG+HV QKGS+   +KLRFDFSH + +  + L ++  +VN  I+  + V +K 
Sbjct: 564 HAALRQTLGEHVTQKGSLCDADKLRFDFSHFEGLSSQVLEQVNYLVNSAIRDNVSVLTKL 623

Query: 712 ATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSN 771
           + + EAK   G  A+FGE Y + VRVV++G                ++S ELCGGTH S 
Sbjct: 624 SDIEEAKTA-GAMALFGEKYDEMVRVVSMG----------------ALSTELCGGTHTSR 666

Query: 772 TREAEAFALLSEEGIAKGIRRITAVTTGLAYKA-------FEAACSLEKEVDDASKIEGS 824
           T     F + SE GIA G+RRI A     A  A       F  +C L K   DAS +   
Sbjct: 667 TGNMGLFFIRSESGIAAGVRRIEACVGKAAELALHDVMSQFTKSCELVK--GDASSLSDK 724

Query: 825 LLEKNQVRKA-QKKVAEENLQKAVKVATE-TAEAAASNGKPFCISRVEVGLDAAAVREAV 882
           +L+  +  +A +K++    ++ A    ++  A A   NG    I+ +  G+D  ++R++V
Sbjct: 725 ILQTLERNRALEKELHTLKIKMAASAGSDLVANAIIINGVKVVIADLP-GIDPKSLRDSV 783

Query: 883 LKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGK 942
             +  +    ++V  T    +K  +  GV +  D +K+++  E +     P+ G+ G G+
Sbjct: 784 DAMKNKMQSGIVVLGTAVADDKVSLIVGVTK--DLTKKVKAGELVNVVAAPVGGK-GGGR 840

Query: 943 GGLASGQGTD 952
             +A   G D
Sbjct: 841 PDMAMAGGND 850


>gi|398949153|ref|ZP_10673129.1| alanine--tRNA ligase [Pseudomonas sp. GM33]
 gi|398159665|gb|EJM47958.1| alanine--tRNA ligase [Pseudomonas sp. GM33]
          Length = 873

 Score =  589 bits (1518), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 357/893 (39%), Positives = 502/893 (56%), Gaps = 90/893 (10%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F +FFE++ H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLRFFEEQGHTRVASSSLIPGNDPTLLFTNAGMNQFKDCFLGQ-----EKRAY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           TRA ++QKC+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AW  LT  K
Sbjct: 58  TRAVSSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAISYAWNFLTSDK 117

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFW 228
              LP ++L+ T +        A D+EA DIW K +  PA R++  G         DNFW
Sbjct: 118 WLNLPKEKLWVTVY--------ASDDEAYDIWTKEIGVPAERMVRIGDNKGAPYASDNFW 169

Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
            MGDTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG L PLP
Sbjct: 170 TMGDTGPCGPCTEIFYDHGADIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLP 229

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
           A  VDTG+G ER++++LQ+  SNY+ D+F  +  A  +A G             +    +
Sbjct: 230 APSVDTGMGLERISAVLQHVHSNYEIDLFQSLLSASAKAIGC-----------TNDAQAS 278

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            +VVADHIR+  F IADG  P NEGR YVLRRI+RRA R+G++ L A+  FF  +V  +V
Sbjct: 279 LKVVADHIRSCGFLIADGVLPSNEGRGYVLRRIIRRACRHGNK-LGAKGSFFYQIVAALV 337

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
             MG+ FPELK ++AHI  ++ AEE  F KTL +G++  ++   +++G V+ G   F L+
Sbjct: 338 AEMGEAFPELKSQQAHIERVLKAEEEQFAKTLEQGLKILEQDLAELKGDVVPGDVVFKLY 397

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFP+DLT  +A ER L +D EGF   M+  R R+RSA       +  MD ++     
Sbjct: 398 DTYGFPMDLTGDIARERSLTIDEEGFEREMEAQRVRARSAS------SFGMDYNS----- 446

Query: 527 KRGVLATDDSFKFIWFQDHKSVIK--AIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
              ++  D   +F  +  H    K  A+Y   + ++ +  G E  IVL  + FYAE GGQ
Sbjct: 447 ---LVKVDVDTEFTGYTAHSGSAKIVALYKDGQSVDVLSEGEEGVIVLDQTPFYAESGGQ 503

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           I D GF++     F VR+    GG  +H G L  G+    VG  V   VD + R   + N
Sbjct: 504 IGDCGFLQAGAARFDVRDTTKTGGAFLHHGVLDSGS--LIVGTPVEAHVDAEVRHATSLN 561

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ ALR+VLGDHV QKGS+V  ++LRFDFSH + + PE L+ +E IVN +I+  
Sbjct: 562 HSATHLLHAALRQVLGDHVQQKGSLVDSQRLRFDFSHFEAIKPEQLKALEEIVNAEIRKN 621

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
            +V ++E  +  AK   G  A+FGE Y D VRV+++G                  S ELC
Sbjct: 622 SEVETEETDIETAKQ-KGAMALFGEKYGDSVRVLSMG----------------DFSVELC 664

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAF--------EAACSLEKEVD 816
           GG H + T +     ++SE G+A G+RRI AVT   A            EAA  ++   D
Sbjct: 665 GGIHANRTGDIGLLKIISEGGVASGVRRIEAVTGAAALAYLNAAEEQLKEAASLVKGSRD 724

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQ-KAVKVATETAEAAASNGKPFCISRVEV-GLD 874
           +      ++LE+N++ + Q     E LQ KA   A +   A A + K   +  V + G D
Sbjct: 725 NLIDKLSAVLERNRLLEKQL----EQLQAKAASAAGDDLSAQAQDVKGVKVLAVRLDGQD 780

Query: 875 AAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWL 927
             A+   V ++  + G  V++  +     K V+ AGV +  D + QL+  + +
Sbjct: 781 GKALLALVDQLKNKLGRAVILLGSVH-EEKVVLVAGVTK--DLTGQLKAGDLM 830


>gi|262384031|ref|ZP_06077167.1| alanyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
 gi|262294929|gb|EEY82861.1| alanyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
          Length = 873

 Score =  589 bits (1518), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 348/821 (42%), Positives = 472/821 (57%), Gaps = 75/821 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R++F +FF  K H    S+P+V   DPTL+F NAGMNQ+K I LG         K 
Sbjct: 4   AKEIRESFKQFFASKEHQIVPSAPMVVKGDPTLMFTNAGMNQFKDIILGNVP-----RKY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWE L +V 
Sbjct: 59  PRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAINWAWEYLVEVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +L  +RLYAT F G    GL  DNEA   W ++LP   +L     DNFWEMGDTGPCGPC
Sbjct: 119 KLNPERLYATVFEGSPAEGLDRDNEAAGYWEQYLPKDHILNGNKHDNFWEMGDTGPCGPC 178

Query: 240 SEIHYDRTGNRD-----AASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D   + +      A +VN D P  IEIWN+VF+QFNR++DGSL+PLPAK +DTG+
Sbjct: 179 SEIHIDLRSDEERAAVSGADMVNKDHPQVIEIWNLVFMQFNRKADGSLEPLPAKVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF PI   I    G        G D   + D+A RV+ADHI
Sbjct: 239 GFERLCMALQGKTSNYDTDVFQPIIKVIAGMAGT-----TYGTD--KQQDIAMRVIADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++FAI DG  P N    YV+RRILRRAVRYG   L  ++ F   L+ ++++ MGD +P
Sbjct: 292 RTIAFAITDGQLPSNAKAGYVIRRILRRAVRYGYTFLDRKEAFMYKLLPVLIETMGDAYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ--GK-VLSGQDAFILWDTYGF 471
           EL  ++  I ++I  EE SF +TL  GI    K  ++ +  GK VL+G DAF L+DTYGF
Sbjct: 352 ELIAQKTLIEKVIKEEEESFLRTLETGIRLLDKKMEETKAAGKTVLNGVDAFTLYDTYGF 411

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E G+  DIE FN AM + +ER+R+A   + G  I +       +   G  
Sbjct: 412 PLDLTELILRENGMEADIEEFNKAMQKQKERARNAAAIETGDWITLKEGECKFV---GYD 468

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
             +   + + ++  K   K +Y                IVL  + FYAE GGQ+ D G++
Sbjct: 469 LFECEAEILRYRQIKQKNKVLYQ---------------IVLDQTPFYAEMGGQVGDTGWL 513

Query: 592 EGLFGSFYVRNVQIYGGFVIH-IGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHM 650
                   V + +      +H +  L +      V      K++  +R     NH+ TH+
Sbjct: 514 IADDEKIDVIDTKRENNLPVHLVAKLPK-----DVTATFTAKINVKKRIQCECNHSATHL 568

Query: 651 LNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS- 709
           L+ ALREVLG HV+QKGS V P+ LRFDFSH + V  E +R++E +V E+I+A   +   
Sbjct: 569 LHEALREVLGTHVEQKGSYVSPDSLRFDFSHFQKVTDEEIRKVEILVGEKIRANFPLEEH 628

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
           +   +AEAK + G  A+FGE Y D VRVV  G                  S ELCGGTH+
Sbjct: 629 RNMPIAEAKAL-GAMALFGEKYGDEVRVVKYGS-----------------SVELCGGTHI 670

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV--------DDASKI 821
             T    +  ++ E  IA G+RRI AVT   A +   A   L +E+        + A  +
Sbjct: 671 PATGMIGSLHVIGESSIAAGVRRIEAVTAEGAEQFVYAQQDLIRELRALMNHMPNLAQAM 730

Query: 822 EGSLLEKNQVRKAQKKVAEENLQKAVKVATE-TAEAAASNG 861
           + S+ E  +++   K++ +   +K++++  E  A+A+ SNG
Sbjct: 731 KKSIEENAEMK---KQIEDYIREKSMRLKEEIVAKASESNG 768


>gi|255015752|ref|ZP_05287878.1| alanyl-tRNA synthetase [Bacteroides sp. 2_1_7]
 gi|410104789|ref|ZP_11299701.1| alanyl-tRNA synthetase [Parabacteroides sp. D25]
 gi|409233801|gb|EKN26635.1| alanyl-tRNA synthetase [Parabacteroides sp. D25]
          Length = 873

 Score =  589 bits (1518), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 347/820 (42%), Positives = 471/820 (57%), Gaps = 73/820 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R++F +FF  K H    S+P+V   DPTL+F NAGMNQ+K I LG         K 
Sbjct: 4   AKEIRESFKQFFASKEHQIVPSAPMVVKGDPTLMFTNAGMNQFKDIILGNVP-----RKY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWE L +V 
Sbjct: 59  PRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAINWAWEYLVEVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +L  +RLYAT F G    GL  DNEA   W ++LP   +L     DNFWEMGDTGPCGPC
Sbjct: 119 KLNPERLYATVFEGSPAEGLDRDNEAAGYWEQYLPKDHILNGNKHDNFWEMGDTGPCGPC 178

Query: 240 SEIHYDRTGNRD-----AASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D   + +      A +VN D P  IEIWN+VF+QFNR++DGSL+PLPAK +DTG+
Sbjct: 179 SEIHIDLRSDEERAAVSGADMVNKDHPQVIEIWNLVFMQFNRKADGSLEPLPAKVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF PI   I    G        G D   + D+A RV+ADHI
Sbjct: 239 GFERLCMALQGKTSNYDTDVFQPIIKVIAGMAGT-----TYGTD--KQQDIAMRVIADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++FAI DG  P N    YV+RRILRRAVRYG   L  ++ F   L+ ++++ MGD +P
Sbjct: 292 RTIAFAITDGQLPSNAKAGYVIRRILRRAVRYGYTFLDRKEAFMYKLLPVLIETMGDAYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ--GK-VLSGQDAFILWDTYGF 471
           EL  ++  I ++I  EE SF +TL  GI    K  ++ +  GK VL+G DAF L+DTYGF
Sbjct: 352 ELIAQKTLIEKVIKEEEESFLRTLETGIRLLDKKMEETKAAGKTVLNGVDAFTLYDTYGF 411

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E G+  DIE FN AM + +ER+R+A   + G  I +       +   G  
Sbjct: 412 PLDLTELILRENGMEADIEEFNKAMQKQKERARNAAAIETGDWITLKEGECKFV---GYD 468

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
             +   + + ++  K   K +Y                IVL  + FYAE GGQ+ D G++
Sbjct: 469 LFECEAEILRYRQIKQKNKVLYQ---------------IVLDQTPFYAEMGGQVGDTGWL 513

Query: 592 EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHML 651
                   V + +      +H+ +         V      K++  +R     NH+ TH+L
Sbjct: 514 IADDEKIDVIDTKRENNLPVHLVTKLPK----DVTATFTAKINVKKRIQCECNHSATHLL 569

Query: 652 NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS-K 710
           + ALREVLG HV+QKGS V P+ LRFDFSH + V  E +R++E +V E+I+A   +   +
Sbjct: 570 HEALREVLGTHVEQKGSYVSPDSLRFDFSHFQKVTDEEIRKVEILVGEKIRANFPLEEHR 629

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
              +AEAK + G  A+FGE Y D VRVV  G                  S ELCGGTH+ 
Sbjct: 630 NMPIAEAKAL-GAMALFGEKYGDEVRVVKYGS-----------------SVELCGGTHIP 671

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV--------DDASKIE 822
            T    +  ++ E  IA G+RRI AVT   A +   A   L +E+        + A  ++
Sbjct: 672 ATGMIGSLRVIGESSIAAGVRRIEAVTAEGAEQFVYAQQDLIRELRALMNHMPNLAQAMK 731

Query: 823 GSLLEKNQVRKAQKKVAEENLQKAVKVATE-TAEAAASNG 861
            S+ E  +++   K++ +   +K++++  E  A+A+ SNG
Sbjct: 732 KSIEENAEMK---KQIEDYIREKSMRLKEEIVAKASESNG 768


>gi|423248728|ref|ZP_17229744.1| alanyl-tRNA synthetase [Bacteroides fragilis CL03T00C08]
 gi|423253677|ref|ZP_17234608.1| alanyl-tRNA synthetase [Bacteroides fragilis CL03T12C07]
 gi|392655306|gb|EIY48949.1| alanyl-tRNA synthetase [Bacteroides fragilis CL03T12C07]
 gi|392657669|gb|EIY51300.1| alanyl-tRNA synthetase [Bacteroides fragilis CL03T00C08]
          Length = 872

 Score =  589 bits (1518), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 328/747 (43%), Positives = 442/747 (59%), Gaps = 61/747 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A + RD+F  FFE K H    S+P+V  +DPTL+F NAGMNQ+K I LG        +K 
Sbjct: 4   AKETRDSFKNFFESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGN-----HPAKY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWE L  V 
Sbjct: 59  HRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAWEYLVDVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +L  + LYAT F G  +  L  DNEA   W ++LP   ++     DNFWEMGDTGPCGPC
Sbjct: 119 KLNPEHLYATVFEGSPEEDLERDNEAASYWEQYLPKDHIINGNKHDNFWEMGDTGPCGPC 178

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + A      LVN+D P  IEIWN+VF+Q+NR++D +L+PLPAK +DTG+
Sbjct: 179 SEIHIDLRPAEERAKISGRDLVNHDHPQVIEIWNLVFMQYNRKADSTLEPLPAKVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF P+  AI Q  G      + G ++ +  D+A RV+ADHI
Sbjct: 239 GFERLCMALQGKTSNYDTDVFQPLIKAIAQMAGT-----EYGKNEQN--DIAMRVIADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++F+I DG  P N    YV+RRILRRAVRYG   L  +  F   L+ +++  MGD +P
Sbjct: 292 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLIDSMGDAYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ--GKV-LSGQDAFILWDTYGF 471
           EL  ++  I ++I  EE SF +TL  GI    K   D +  GK  +SG+DAF L+DT+GF
Sbjct: 352 ELIAQKELIEKVIKEEEESFLRTLETGIRLLDKTMADTKANGKTEISGKDAFTLYDTFGF 411

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E G+ V++E F+  M + ++R+R+A   + G  I++    T  +   G  
Sbjct: 412 PLDLTELILRENGMTVNVEEFDAEMQQQKQRARNAAAIETGDWIILKEGTTEFV---GYD 468

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            T+     + ++  K   + +Y                IVL  + FYAE GGQ+ D G +
Sbjct: 469 YTEYETSILRYRQVKQKNQTLYQ---------------IVLDYTPFYAESGGQVGDTGVL 513

Query: 592 EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHML 651
              F +  V + +      IHI   T+          + C VD D+R   A NH+ TH+L
Sbjct: 514 VNEFETIEVIDTKKENNLPIHI---TKKLPEHPEAPMMAC-VDTDKRAACAANHSATHLL 569

Query: 652 NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS-K 710
           + ALREVLG+HV+QKGS+V P+ LRFDFSH + V  E LR++E +VN +I+A + +   +
Sbjct: 570 DEALREVLGEHVEQKGSLVTPDSLRFDFSHFQKVTDEELRKVEHLVNAKIRANVPLQEHR 629

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
              + EAK + G  A+FGE Y D VRV+  G                  S E CGGTH++
Sbjct: 630 NIPIEEAKEL-GAIALFGEKYGDHVRVIQFGS-----------------SIEFCGGTHVA 671

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVT 797
            T       ++SE  +A G+RRI A T
Sbjct: 672 ATGNIGMVKIISESSVAAGVRRIEAYT 698


>gi|422658836|ref|ZP_16721267.1| alanyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M302278]
 gi|331017460|gb|EGH97516.1| alanyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M302278]
          Length = 874

 Score =  589 bits (1518), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 362/931 (38%), Positives = 523/931 (56%), Gaps = 88/931 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F  FFE++ H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLGFFEEQGHTRVPSSSLIPGNDPTLLFTNAGMNQFKDCFLGQ-----EKRAY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           TRA  +QKC+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AW  LT  K
Sbjct: 58  TRAVTSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAITYAWTFLTSEK 117

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFW 228
              LP ++L+ T +        A D+EA DIW K +  PA R++  G         DNFW
Sbjct: 118 WLNLPKEKLWVTVY--------ATDDEAYDIWTKEIGVPAERMVRIGDNKGAPYASDNFW 169

Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
            MGDTGPCGPCSEI +D   +           D    IEIWN VF+QFNR +DG L PLP
Sbjct: 170 TMGDTGPCGPCSEIFFDHGADIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLP 229

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
           A  VDTG+G ER++++LQ+  SNY+ D+F  +  A   A G            ++    +
Sbjct: 230 APSVDTGMGLERVSAVLQHVHSNYEIDLFQSLLTASANAIGC-----------SNDNQAS 278

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            +VVADHIR+  F IADG  P +EGR YVLRRI+RRA R+G++ L A+  FF  +V  +V
Sbjct: 279 LKVVADHIRSCGFLIADGVLPSSEGRGYVLRRIIRRACRHGNK-LGAKGSFFYQIVAALV 337

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
             MG  FPEL Q+++HI  ++  EE  F KTL +G++  ++   +++G V+ G+  F L+
Sbjct: 338 AEMGSAFPELVQQQSHIERVLRGEEEQFAKTLEQGLKIIEQDLAELKGTVVPGEIVFKLY 397

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFP+DLT  +A ER L +D EGF   M+  R R+RSA       +  MD ++     
Sbjct: 398 DTYGFPMDLTGDIARERNLTLDEEGFEREMEAQRVRARSAS------SFGMDYNS----- 446

Query: 527 KRGVLATDDSFKFIWFQ--DHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
              ++  D + +F  +      + + A+Y   + +  +  G E  ++L ++ FYAE GGQ
Sbjct: 447 ---LVKVDVATQFTGYSATTGSASVVALYKDGQSVTHLNEGEEGVVILDTTPFYAESGGQ 503

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           I D GF+      F V +    GG  +H G +  G+   SVG +V  +V  + R     N
Sbjct: 504 IGDSGFLLAGDARFDVSDTTKTGGAFLHHGVVASGS--LSVGVQVETQVADEVRDATKLN 561

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ ALR+VLG+HV QKGS+V  ++LRFDFSH + + PE LR +E IVN +I+  
Sbjct: 562 HSATHLLHAALRQVLGEHVQQKGSLVDSQRLRFDFSHFESIKPEQLRALEDIVNAEIRKN 621

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
             V ++E  +  AK   G  A+FGE Y D VRV+++G +                S ELC
Sbjct: 622 TPVVTEETDIDTAKK-KGAMALFGEKYGDSVRVLSMGGE---------------FSVELC 665

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEG- 823
           GG H S T +   F ++SE G+A G+RRI AVT   A     +A    KE   A+ ++G 
Sbjct: 666 GGIHASRTGDISLFKIVSEGGVAAGVRRIEAVTGAAALAWLNSAEDQLKEA--ATLVKGN 723

Query: 824 --SLLEKNQVRKAQKKVAEENLQ----KAVKVATETAEAAASN--GKPFCISRVEVGLDA 875
             +LL+K      + ++ E+ L+    KA   A +   +AA +  G     +R++ G D 
Sbjct: 724 RDNLLDKLTAVLERNRLLEKQLEQLQAKAASAAGDDLSSAALDVKGVKVLATRLD-GQDG 782

Query: 876 AAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLK 935
            A+   V ++  + G  V++  +    +K V+ AGV +  D + QL+  + +  A   + 
Sbjct: 783 KALLALVDQLKNKLGRAVILLGSVH-EDKVVLVAGVTK--DLTGQLKAGDLMKQAATAVG 839

Query: 936 GRCGKGKGGLASGQGTDAAQVTPAMDLAAEF 966
           G+ G G+  +A G G DA  +  A+ LA  F
Sbjct: 840 GK-GGGRPDMAQGGGVDATALDSALALAVPF 869


>gi|299141813|ref|ZP_07034948.1| alanine--tRNA ligase [Prevotella oris C735]
 gi|298576664|gb|EFI48535.1| alanine--tRNA ligase [Prevotella oris C735]
          Length = 886

 Score =  589 bits (1518), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 356/931 (38%), Positives = 505/931 (54%), Gaps = 68/931 (7%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A +VR+++ KFFE K H    S+P+V  +DPTL+F NAGMNQ+K I LGT DP     K 
Sbjct: 3   ANEVRESYKKFFEGKGHKIVASAPMVIKDDPTLMFTNAGMNQWKDIILGTKDP----GKD 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK  AI++AWE L  V 
Sbjct: 59  VRRVDSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKEGAIDYAWEYLVSVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
            L  + LY T F G  + GL  D+EA   W K +PA  ++     DNFWEMGDTGPCGPC
Sbjct: 119 HLNPEDLYVTVFEGSPEEGLERDDEAASYWAKHVPADHIINGNKHDNFWEMGDTGPCGPC 178

Query: 240 SEIHYD-RTGNRDAA----SLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           +EIH D RT    A      LVN D+P  IEIWNIVF+Q+NR++DGSL+PLP   +DTG+
Sbjct: 179 TEIHVDSRTPEEKAKMPGRELVNKDNPQVIEIWNIVFMQYNRKADGSLEPLPMHVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGAR-------PYSGKVGADDADKVDMAY 347
           GFERL  +LQ+K SNYDTD+F PI   I+  +G +         +G+ G D+ +K+D+A 
Sbjct: 239 GFERLVRMLQDKHSNYDTDIFQPIIKQIEAISGKKYGFTTPTGLNGE-GKDEQEKIDIAM 297

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RVVADH+R ++F+IADG  P N    YV+RRILRRAVRY    L  ++ F   L+ ++V+
Sbjct: 298 RVVADHLRAVAFSIADGQLPSNAKAGYVIRRILRRAVRYAYTFLDQKEAFLYKLLPVLVQ 357

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK---VLSGQDAFI 464
            MG  +PEL  ++  I  ++  EE SF +TL KGI        +++      L G  AF 
Sbjct: 358 EMGQAYPELSAQQELIARVMKEEEDSFLRTLEKGINLLNGDMDELKAHGQTELDGTSAFR 417

Query: 465 LWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAA 524
           L+DTYGFPLDLT+L+  E G  VD +GFN  M + + R+R+A       A+V + D    
Sbjct: 418 LFDTYGFPLDLTELICREHGYTVDEKGFNEEMAKQKARARNA-------AVVENGDWEVI 470

Query: 525 LHKRGVLATDDSFKFI-WFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGG 583
                V    D  ++      ++ V +   T  E            IVL  + FY E GG
Sbjct: 471 REGEQVFVGYDYTEYTCHILRYRKVTQKKNTFYE------------IVLDYTPFYGEMGG 518

Query: 584 QIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAP 643
           Q+ D+G +     +  + + +      IHI           +  E +  VD ++R   A 
Sbjct: 519 QVGDQGTLVSENETVEIIDTKRENNQSIHIVKQLPK----DLQAEFMACVDVEKRNGSAA 574

Query: 644 NHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKA 703
           NHT TH+L++AL++VLGDHV+QKGS V P  LRFDFSH + V  E LR++E +VN+ I+ 
Sbjct: 575 NHTATHLLDYALKQVLGDHVEQKGSYVDPTTLRFDFSHFQKVTEEELRQVEKLVNKMIRE 634

Query: 704 ELDVFS-KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAE 762
           +  +   ++  L EAK + G  A+FGE Y D VRVV  G                  S E
Sbjct: 635 DFPLDEHRDTPLEEAKEL-GAVALFGEKYGDKVRVVRFGP-----------------SCE 676

Query: 763 LCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVT----TGLAYKAFEAACSLEKEVDDA 818
            CGG H  +T     F ++SE  +A GIRRI A+T        Y   +    L+   +++
Sbjct: 677 FCGGIHAKSTGRIGFFKIISESSVAAGIRRIEALTGQACEDTIYALQDMMNDLKSMFNNS 736

Query: 819 SKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAV 878
             ++ +L +        +K  E+   +AV+   E     A N     + +  + L+ AA 
Sbjct: 737 KDLKATLKKFIGEHDEMRKEIEKFQAQAVERTKEELLKRAQNVNGVQVIKAVLPLEPAAA 796

Query: 879 REAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRC 938
           ++   K+ E     ++V       NK ++     +   +   L     +  A + ++G  
Sbjct: 797 KDLAFKLRENISENLVVVIGSTAGNKPLLTVMFSDDMVKDHSLNAGTIIHEAAKLIQG-G 855

Query: 939 GKGKGGLASGQGTDAAQVTPAMDLAAEFAAM 969
           G G+   A   G +   ++ A+D   E A +
Sbjct: 856 GGGQPHYAQAGGKNLDGISAAVDKVIELANL 886


>gi|301310907|ref|ZP_07216836.1| alanine--tRNA ligase [Bacteroides sp. 20_3]
 gi|423339235|ref|ZP_17316976.1| alanyl-tRNA synthetase [Parabacteroides distasonis CL09T03C24]
 gi|300830970|gb|EFK61611.1| alanine--tRNA ligase [Bacteroides sp. 20_3]
 gi|409231137|gb|EKN23994.1| alanyl-tRNA synthetase [Parabacteroides distasonis CL09T03C24]
          Length = 873

 Score =  589 bits (1518), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 348/821 (42%), Positives = 472/821 (57%), Gaps = 75/821 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R++F +FF  K H    S+P+V   DPTL+F NAGMNQ+K I LG         K 
Sbjct: 4   AKEIRESFKQFFASKEHQIVPSAPMVVKGDPTLMFTNAGMNQFKDIILGNVP-----RKY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWE L +V 
Sbjct: 59  PRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAINWAWEYLVEVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +L  +RLYAT F G    GL  DNEA   W ++LP   +L     DNFWEMGDTGPCGPC
Sbjct: 119 KLNPERLYATVFEGSPAEGLDRDNEAAGYWEQYLPKDHILNGNKHDNFWEMGDTGPCGPC 178

Query: 240 SEIHYDRTGNRD-----AASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D   + +      A +VN D P  IEIWN+VF+QFNR++DGSL+PLPAK +DTG+
Sbjct: 179 SEIHIDLRSDEERAAVSGADMVNKDHPQVIEIWNLVFMQFNRKADGSLEPLPAKVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF PI   I    G        G D   + D+A RV+ADHI
Sbjct: 239 GFERLCMALQGKTSNYDTDVFQPIIKVIAGMAGT-----TYGTD--KQQDIAMRVIADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++FAI DG  P N    YV+RRILRRAVRYG   L  ++ F   L+ ++++ MGD +P
Sbjct: 292 RTIAFAITDGQLPSNAKAGYVIRRILRRAVRYGYTFLDRKEAFMYKLLPVLIETMGDAYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ--GK-VLSGQDAFILWDTYGF 471
           EL  ++  I ++I  EE SF +TL  GI    K  ++ +  GK VL+G DAF L+DTYGF
Sbjct: 352 ELIAQKTLIEKVIKEEEESFLRTLETGIRLLDKKMEETKAAGKTVLNGVDAFTLYDTYGF 411

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E G+  DIE FN AM + +ER+R+A   + G  I +       +   G  
Sbjct: 412 PLDLTELILRENGMEADIEEFNKAMQKQKERARNAAAIETGDWITLKEGECKFV---GYD 468

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
             +   + + ++  K   K +Y                IVL  + FYAE GGQ+ D G++
Sbjct: 469 LFECEAEILRYRQIKQKNKVLYQ---------------IVLDQTPFYAEMGGQVGDTGWL 513

Query: 592 EGLFGSFYVRNVQIYGGFVIH-IGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHM 650
                   V + +      +H +  L +      V      K++  +R     NH+ TH+
Sbjct: 514 IADDEKIDVIDTKRENNLPVHLVAKLPK-----DVTATFTAKINVKKRIQCECNHSATHL 568

Query: 651 LNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS- 709
           L+ ALREVLG HV+QKGS V P+ LRFDFSH + V  E +R++E +V E+I+A   +   
Sbjct: 569 LHEALREVLGTHVEQKGSYVSPDSLRFDFSHFQKVTDEEIRKVEILVGEKIRANFPLEEH 628

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
           +   +AEAK + G  A+FGE Y D VRVV  G                  S ELCGGTH+
Sbjct: 629 RNMPIAEAKAL-GAMALFGEKYGDEVRVVKYGS-----------------SVELCGGTHI 670

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV--------DDASKI 821
             T    +  ++ E  IA G+RRI AVT   A +   A   L +E+        + A  +
Sbjct: 671 PATGMIGSLRVIGESSIAAGVRRIEAVTAEGAEQFVYAQQDLIRELRALMNHMPNLAQAM 730

Query: 822 EGSLLEKNQVRKAQKKVAEENLQKAVKVATE-TAEAAASNG 861
           + S+ E  +++   K++ +   +K++++  E  A+A+ SNG
Sbjct: 731 KKSIEENAEMK---KQIEDYIREKSMRLKEEIVAKASESNG 768


>gi|150009141|ref|YP_001303884.1| alanyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
 gi|298377115|ref|ZP_06987069.1| alanine--tRNA ligase [Bacteroides sp. 3_1_19]
 gi|423334542|ref|ZP_17312321.1| alanyl-tRNA synthetase [Parabacteroides distasonis CL03T12C09]
 gi|205830169|sp|A6LEZ8.1|SYA_PARD8 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|149937565|gb|ABR44262.1| alanyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
 gi|298266099|gb|EFI07758.1| alanine--tRNA ligase [Bacteroides sp. 3_1_19]
 gi|409225733|gb|EKN18651.1| alanyl-tRNA synthetase [Parabacteroides distasonis CL03T12C09]
          Length = 873

 Score =  589 bits (1518), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 349/825 (42%), Positives = 473/825 (57%), Gaps = 83/825 (10%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R++F +FF  K H    S+P+V   DPTL+F NAGMNQ+K I LG         K 
Sbjct: 4   AKEIRESFKQFFASKEHQIVPSAPMVVKGDPTLMFTNAGMNQFKDIILGNVP-----RKY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWE L +V 
Sbjct: 59  PRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAINWAWEYLVEVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +L  +RLYAT F G    GL  DNEA   W ++LP   +L     DNFWEMGDTGPCGPC
Sbjct: 119 KLNPERLYATVFEGSPAEGLDRDNEAAGYWEQYLPKDHILNGNKHDNFWEMGDTGPCGPC 178

Query: 240 SEIHYDRTGNRD-----AASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D   + +      A +VN D P  IEIWN+VF+QFNR++DGSL+PLPAK +DTG+
Sbjct: 179 SEIHIDLRSDEERAAVSGADMVNKDHPQVIEIWNLVFMQFNRKADGSLEPLPAKVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF PI   I    G        G D   + D+A RV+ADHI
Sbjct: 239 GFERLCMALQGKTSNYDTDVFQPIIKVIAGMAGT-----TYGTDK--QQDIAMRVIADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++FAI DG  P N    YV+RRILRRAVRYG   L  ++ F   L+ ++++ MGD +P
Sbjct: 292 RTIAFAITDGQLPSNAKAGYVIRRILRRAVRYGYTFLDRKEAFMYKLLPVLIETMGDAYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ--GK-VLSGQDAFILWDTYGF 471
           EL  ++  I ++I  EE SF +TL  GI    K  ++ +  GK VL+G DAF L+DTYGF
Sbjct: 352 ELIAQKTLIEKVIKEEEESFLRTLETGIRLLDKKMEETKAAGKTVLNGVDAFTLYDTYGF 411

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E G+  DIE FN AM + +ER+R+A   + G  I +              
Sbjct: 412 PLDLTELILRENGMEADIEEFNKAMQKQKERARNAAAIETGDWITL-------------- 457

Query: 532 ATDDSFKFI---WFQDHKSVIKAIYTGSEFIESVVPGNEV--GIVLASSSFYAEQGGQIF 586
             D   KF+    F+    +++           +   N+V   IVL  + FYAE GGQ+ 
Sbjct: 458 -KDGECKFVGYDLFECEAEILR--------YRQIKQKNKVLYQIVLDQTPFYAEMGGQVG 508

Query: 587 DEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
           D G++        V + +      +H+ +         V      K++  +R     NH+
Sbjct: 509 DTGWLIADDEKIDVIDTKRENNLPVHLVTKLPK----DVTATFTAKINVKKRIQCECNHS 564

Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD 706
            TH+L+ ALREVLG HV+QKGS V P+ LRFDFSH + V  E +R++E +V E+I+A   
Sbjct: 565 ATHLLHEALREVLGTHVEQKGSYVSPDSLRFDFSHFQKVTDEEIRKVEILVGEKIRANFP 624

Query: 707 VFS-KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
           +   +   +AEAK + G  A+FGE Y D VRVV  G                  S ELCG
Sbjct: 625 LEEHRNMPIAEAKAL-GAMALFGEKYGDEVRVVKYGS-----------------SVELCG 666

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV--------DD 817
           GTH+  T    +  ++ E  IA G+RRI AVT   A +   A   L +E+        + 
Sbjct: 667 GTHIPATGMIGSLRVIGESSIAAGVRRIEAVTAEGAEQFVYAQQDLIRELRALMNHMPNL 726

Query: 818 ASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATE-TAEAAASNG 861
           A  ++ S+ E  +++   K++ +   +K++++  E  A+A+ SNG
Sbjct: 727 AQAMKKSIEENAEMK---KQIEDYIREKSMRLKEEIVAKASESNG 768


>gi|213968623|ref|ZP_03396765.1| alanyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
 gi|301385518|ref|ZP_07233936.1| alanyl-tRNA synthetase [Pseudomonas syringae pv. tomato Max13]
 gi|213926556|gb|EEB60109.1| alanyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
          Length = 874

 Score =  589 bits (1518), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 362/931 (38%), Positives = 523/931 (56%), Gaps = 88/931 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F  FFE++ H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLGFFEEQGHTRVPSSSLIPGNDPTLLFTNAGMNQFKDCFLGQ-----EKRAY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           TRA  +QKC+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AW  LT  K
Sbjct: 58  TRAVTSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAITYAWTFLTSEK 117

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFW 228
              LP ++L+ T +        A D+EA DIW K +  PA R++  G         DNFW
Sbjct: 118 WLNLPKEKLWVTVY--------ATDDEAYDIWTKEIGVPAERMVRIGDNKGAPYASDNFW 169

Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
            MGDTGPCGPCSEI +D   +           D    IEIWN VF+QFNR +DG L PLP
Sbjct: 170 TMGDTGPCGPCSEIFFDHGADIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLP 229

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
           A  VDTG+G ER++++LQ+  SNY+ D+F  +  A   A G            ++    +
Sbjct: 230 APSVDTGMGLERVSAVLQHVHSNYEIDLFQSLLTASANAIGC-----------SNDNQAS 278

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            +VVADHIR+  F IADG  P +EGR YVLRRI+RRA R+G++ L A+  FF  +V  +V
Sbjct: 279 LKVVADHIRSCGFLIADGVLPSSEGRGYVLRRIIRRACRHGNK-LGAKGSFFYQIVAALV 337

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
             MG  FPEL Q+++HI  ++  EE  F KTL +G++  ++   +++G V+ G+  F L+
Sbjct: 338 AEMGSAFPELVQQQSHIERVLRGEEEQFAKTLEQGLKIIEQDLAELKGTVVPGEIVFKLY 397

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFP+DLT  +A ER L +D EGF   M+  R R+RSA       +  MD ++     
Sbjct: 398 DTYGFPMDLTGDIARERNLTLDEEGFEREMEAQRVRARSAS------SFGMDYNS----- 446

Query: 527 KRGVLATDDSFKFIWFQ--DHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
              ++  D + +F  +      + + A+Y   + +  +  G E  ++L ++ FYAE GGQ
Sbjct: 447 ---LVKVDVATQFTGYSATTGSASVVALYKDGQSVTHLNEGEEGVVILDTTPFYAESGGQ 503

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           I D GF+      F V +    GG  +H G +  G+   SVG +V  +V  + R     N
Sbjct: 504 IGDSGFLLAGDTRFDVSDTTKTGGASLHHGVVASGS--LSVGVQVETQVADEVRDATKLN 561

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ ALR+VLG+HV QKGS+V  ++LRFDFSH + + PE LR +E IVN +I+  
Sbjct: 562 HSATHLLHAALRQVLGEHVQQKGSLVDSQRLRFDFSHFESIKPEQLRALEDIVNAEIRKN 621

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
             V ++E  +  AK   G  A+FGE Y D VRV+++G +                S ELC
Sbjct: 622 TPVVTEETDIDTAKK-KGAMALFGEKYGDSVRVLSMGGE---------------FSVELC 665

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEG- 823
           GG H S T +   F ++SE G+A G+RRI AVT   A     +A    KE   A+ ++G 
Sbjct: 666 GGIHASRTGDISLFKIVSEGGVAAGVRRIEAVTGAAALAWLNSAEDQLKEA--ATLVKGN 723

Query: 824 --SLLEKNQVRKAQKKVAEENLQ----KAVKVATETAEAAASN--GKPFCISRVEVGLDA 875
             +LL+K      + ++ E+ L+    KA   A +   +AA +  G     +R++ G D 
Sbjct: 724 RDNLLDKLTAVLERNRLLEKQLEQLQAKAASAAGDDLSSAALDVKGVKVLATRLD-GQDG 782

Query: 876 AAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLK 935
            A+   V ++  + G  V++  +    +K V+ AGV +  D + QL+  + +  A   + 
Sbjct: 783 KALLALVDQLKNKLGRAVILLGSVH-EDKVVLVAGVTK--DLTGQLKAGDLMKQAATAVG 839

Query: 936 GRCGKGKGGLASGQGTDAAQVTPAMDLAAEF 966
           G+ G G+  +A G G DA  +  A+ LA  F
Sbjct: 840 GK-GGGRPDMAQGGGVDATALDSALALAVPF 869


>gi|389839827|ref|YP_006341911.1| alanyl-tRNA synthetase [Cronobacter sakazakii ES15]
 gi|387850303|gb|AFJ98400.1| alanyl-tRNA synthetase [Cronobacter sakazakii ES15]
          Length = 875

 Score =  589 bits (1518), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 364/930 (39%), Positives = 516/930 (55%), Gaps = 81/930 (8%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  + +
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQYAWELLTGEQWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP DRL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 NLPKDRLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNY+ D+F  +  A+   TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYEIDLFQKLIKAVANVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRA+R+G+ +L A+D FF  LV  +V V
Sbjct: 283 VIADHIRSCAFLIADGVIPSNENRGYVLRRIIRRAIRHGN-MLGAKDTFFYKLVGPLVDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    ELK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGAAGEELKRQQAQVEQVLKTEEEQFARTLERGLALLDEELSKLTGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R +            AD  A +   
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSG--------FGADYNAMIRVD 453

Query: 529 GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDE 588
           G       FK     +  + + A++   + +E V  G +  +VL  + FYAE GGQ+ D+
Sbjct: 454 GA----SEFKGYDHTELTAKVTALFVDGKSVEQVTAGQQAVVVLDETPFYAESGGQVGDK 509

Query: 589 GFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
           G ++G   +F V + Q YG  + HIG L  G     VGE V  +VD+ RR  I  NH+ T
Sbjct: 510 GELKGNGFTFTVNDTQKYGQAIGHIGELASGV--LKVGEGVKAEVDHARRDRIRLNHSAT 567

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R++E +VN QI+  L + 
Sbjct: 568 HLMHAALRQVLGTHVAQKGSLVNDKGLRFDFSHFEAMKPEEIRKVEDLVNAQIRRNLPIE 627

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
           +    L  AK   G  A+FGE Y D VRV+++G                  S ELCGG H
Sbjct: 628 TNVMDLEAAKA-KGAMALFGEKYEDRVRVLSMG----------------DFSTELCGGIH 670

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEK 828
            S T +   F ++SE G A G+RRI AVT   A     A      E+    K +   L  
Sbjct: 671 ASRTGDIGLFRIVSESGTAAGVRRIEAVTGEGALSLVHAQNDRLNELSHLLKSDSQTLND 730

Query: 829 N------QVRKAQKKVAEENLQKAVK-VATETAEAAASNGKPFCISRVEVGLDAAAVREA 881
                  + R+ +K++ +   Q+A +  A  +++A   NG    +S +  G++   +R  
Sbjct: 731 KVRAMVERTRQLEKELQQLKEQQAAQESANLSSKAMDINGVKLLVSEL-AGVEPKMLRTM 789

Query: 882 VLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKG 941
           V  +  Q G  V+V +T     K  + AGV +  D + +++  E +    Q + G+ G G
Sbjct: 790 VDDLKNQLGSSVIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELVGMIAQQVGGKGG-G 845

Query: 942 KGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           +  +A   GTDAA +  A+     +   KL
Sbjct: 846 RPDMAQAGGTDAAALPAALGSVESWVTAKL 875


>gi|417819405|ref|ZP_12466022.1| alanyl-tRNA synthetase [Vibrio cholerae HE39]
 gi|419835471|ref|ZP_14358916.1| alanine--tRNA ligase [Vibrio cholerae HC-46B1]
 gi|423733834|ref|ZP_17707050.1| alanine--tRNA ligase [Vibrio cholerae HC-41B1]
 gi|423946562|ref|ZP_17733470.1| alanine--tRNA ligase [Vibrio cholerae HE-40]
 gi|423976000|ref|ZP_17737017.1| alanine--tRNA ligase [Vibrio cholerae HE-46]
 gi|424008118|ref|ZP_17751068.1| alanine--tRNA ligase [Vibrio cholerae HC-44C1]
 gi|340041261|gb|EGR02228.1| alanyl-tRNA synthetase [Vibrio cholerae HE39]
 gi|408631837|gb|EKL04360.1| alanine--tRNA ligase [Vibrio cholerae HC-41B1]
 gi|408662016|gb|EKL32993.1| alanine--tRNA ligase [Vibrio cholerae HE-40]
 gi|408666174|gb|EKL36973.1| alanine--tRNA ligase [Vibrio cholerae HE-46]
 gi|408858884|gb|EKL98554.1| alanine--tRNA ligase [Vibrio cholerae HC-46B1]
 gi|408866405|gb|EKM05788.1| alanine--tRNA ligase [Vibrio cholerae HC-44C1]
          Length = 860

 Score =  589 bits (1518), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 358/922 (38%), Positives = 515/922 (55%), Gaps = 80/922 (8%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR  F  FFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI++AWE LT V +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           P +RL  T +          D+EA DIW K   +PA R++  G K        DNFW+MG
Sbjct: 122 PKERLLVTVY--------ETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKH 289
           DTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG+++PLP   
Sbjct: 174 DTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPS 233

Query: 290 VDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRV 349
           VDTG+G ER+++I+Q   SNY+ DVF  +  A   A G +           D  + + RV
Sbjct: 234 VDTGMGIERISAIMQGVHSNYEIDVFQTLIKAAADAIGYQ-----------DLTNQSLRV 282

Query: 350 VADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVM 409
           VADHIR+ +F I DG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF+ LV  + +VM
Sbjct: 283 VADHIRSCAFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGAFFHKLVGPLAEVM 341

Query: 410 GDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTY 469
           G    ELK+++A + +++  EE +FG+TL +G+     A   + G+VL G+  F L+DTY
Sbjct: 342 GTAGVELKKQQALVEKVLRIEEENFGRTLDRGMSILNDALDQLSGQVLDGETVFKLYDTY 401

Query: 470 GFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRG 529
           GFP DLT  +A ERG  +D  GF  AM+E R+R+R A      G    D +   +L K  
Sbjct: 402 GFPADLTNDVARERGFSIDEAGFEQAMEEQRQRAREA------GQFGTDYN---SLIKS- 451

Query: 530 VLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEG 589
             +T+  F        +SV++ ++     + ++  G++  IVL ++ FYAE GGQ  D G
Sbjct: 452 --STNTEFCGYTASRGQSVVREMFVEGAEVSTLSAGDKAIIVLDNTPFYAESGGQCGDTG 509

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
            ++   G F+V + Q  G  + H G L +G    + G++V   VD  RR  I+ NH+ TH
Sbjct: 510 VLKTDAGIFHVEDTQKLGNAIAHHGVLAQGV--LATGDQVDAIVDEKRRAAISLNHSATH 567

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +L+ ALR+VLG+HV QKGS+V  E LRFDFSH + +    ++ +E +VN++++    + +
Sbjct: 568 LLHAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTAAEIKEVERLVNQEVRRNHSIET 627

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
               + EAK   G  A+FGE Y D VRV+++G                  S ELCGG H 
Sbjct: 628 NIMNIDEAKA-KGAMALFGEKYDDQVRVLSMG----------------DFSTELCGGIHA 670

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKN 829
           SNT +   F ++SE GIA GIRRI AVT   A    +A  +           +  LLEK 
Sbjct: 671 SNTGDIGLFKIISEGGIAAGIRRIEAVTGEGALDYLDAQQAQHDAKVSEMAAKAKLLEK- 729

Query: 830 QVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQK 889
           ++++ + K+A +     +    + A      G    ++++  G D  A+R  V  +  Q 
Sbjct: 730 EIQQLKDKLAAKESAGLINQVKQIA------GVNVLVAQLN-GADNKALRGMVDDLKNQL 782

Query: 890 GMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQ 949
              +++   +    K  + AGV   +D + +++  E +      + G+ G G+  +A   
Sbjct: 783 SSGIIMLG-NVAEGKVGLIAGVT--NDLTNKVKAGELVNMVALQVGGK-GGGRPDMAQAG 838

Query: 950 GTDAAQVTPAMDLAAEFAAMKL 971
           GTDA  +  A++    + A +L
Sbjct: 839 GTDAHALPSALESVDAWIAERL 860


>gi|399032732|ref|ZP_10732011.1| alanine--tRNA ligase [Flavobacterium sp. CF136]
 gi|398068887|gb|EJL60276.1| alanine--tRNA ligase [Flavobacterium sp. CF136]
          Length = 878

 Score =  589 bits (1518), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 361/926 (38%), Positives = 519/926 (56%), Gaps = 77/926 (8%)

Query: 63  VRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRA 122
           VR  F  FF+   H+   S+P+V  +DPTL+F N+GM Q+K  FLG   P ++     R 
Sbjct: 6   VRKQFLDFFQSNGHLIVPSAPIVLKDDPTLMFNNSGMAQFKEYFLGNGTPKSK-----RI 60

Query: 123 CNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLP 182
            +TQKC+R  GKHNDL+DVG DTYHHT FEMLGNWSFGDYFK EAI WAW LLT+VY++P
Sbjct: 61  ADTQKCLRVSGKHNDLEDVGFDTYHHTMFEMLGNWSFGDYFKKEAINWAWTLLTEVYKIP 120

Query: 183 ADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPCSEI 242
            + LY + F G  +  +  D EA DIW   +   R++    KDNFWEMGD GPCGPCSEI
Sbjct: 121 KENLYVSVFEGSREDNVPFDQEAWDIWKTLIDEDRIILGNKKDNFWEMGDQGPCGPCSEI 180

Query: 243 HYDRTGNRDAA-----SLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFE 297
           H D     + A     SLVNND P  +EIWN VF++FNR++DGSL+ LPA+HVDTG+GFE
Sbjct: 181 HVDLRPESEKALVTGKSLVNNDHPQVVEIWNNVFMEFNRKADGSLEKLPAQHVDTGMGFE 240

Query: 298 RLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVG--ADDADKVDMAYRVVADHIR 355
           RL   LQ K SNYDTDVF P+ + ++Q TG +  S +V   +++ +K ++A RVV DH+R
Sbjct: 241 RLCMALQGKTSNYDTDVFTPLIEKVEQITGLKYTSDEVKNISEEQNKTNIAIRVVVDHVR 300

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPE 415
            ++FAIADG  P N G  YV+RRILRRA+RYG   L  ++ F N LV ++   MG+ FPE
Sbjct: 301 AVAFAIADGQLPSNTGAGYVIRRILRRAIRYGFTFLNTKEPFINKLVEVLANQMGEFFPE 360

Query: 416 LKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDL 475
           +K ++  +  +I  EEASF +TL +G++         +G+ +SG  AF L+DT+GFP DL
Sbjct: 361 IKSQQQLVTNVIREEEASFLRTLDQGLQLLDNVIAQTKGEEVSGAKAFELYDTFGFPKDL 420

Query: 476 TQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDD 535
           T L+ +E+ +  +   F+ +M E ++RSR+A              +  +     VL   +
Sbjct: 421 TALILKEKNMSFNEAEFDASMQEQKKRSRAA--------------SEVSTEDWSVLIPGN 466

Query: 536 SFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLF 595
              F+ +   ++ +K   T    ++S   G    IVL S+ FY E GGQ+ D+G +    
Sbjct: 467 VEAFVGYDKTENEVK--ITRIRKVDSKKDGILYQIVLDSTPFYPEGGGQVGDKGTLVSAN 524

Query: 596 GSFYVRNVQIYGGFVIHIG-SLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFA 654
            +  + + +     ++H    L E     ++    + KV+ D R   + NH+ TH+++ A
Sbjct: 525 ETIEIIDTKKENNLILHFAKQLPE-----NIEAGFVAKVNTDLRGSTSKNHSATHLMHLA 579

Query: 655 LREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATL 714
           LR++LG HV+QKGS+V P  LRFDFSH   V  E LR++E+ VN QI+A+L +       
Sbjct: 580 LRKLLGTHVEQKGSLVNPNYLRFDFSHFSKVSDEELRQVEASVNAQIEAQLQLVEHRNIP 639

Query: 715 AEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTRE 774
            +     G  A+FGE Y D VR++  G                  S ELCGG H+ NT E
Sbjct: 640 IKEALDKGAMALFGEKYGDNVRMIEFGE-----------------SKELCGGIHVKNTAE 682

Query: 775 AEAFALLSEEGIAKGIRRITAVTTGLAYKAF----EAACSLEKEV----DDASKIEGSLL 826
              F ++SE  +A GIRRI A+ TG A K+F    E   S  KE      D  K   SL 
Sbjct: 683 IWHFKIISEGAVAAGIRRIEAI-TGDAVKSFYQNQENTLSEIKEALKNPQDILKSVASLQ 741

Query: 827 EKNQVRKAQKKVAEENLQKAVKVATE-TAEAAASNGKPFCISRVEVGLDAAAVREAVLKV 885
           + N   K +K++ +   +K   + TE   +    NG  F   +V++ +  A+ ++    +
Sbjct: 742 DDNA--KLKKQIEQLLKEKVGALKTELEKDFQEVNGLNFLAKQVDLSM--ASTKDLASAL 797

Query: 886 IEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTA-ALQPLKGRCGKGKGG 944
              K    +  ++ E     + C         SK+L  S+ L A A+    G+  +G GG
Sbjct: 798 GSSKSDSFVFLASVEDGQPNIHCY-------ISKELVASKSLNANAVIKELGKYIEGNGG 850

Query: 945 ----LASGQGTDAAQVTPAMDLAAEF 966
                ASG+G +A  ++ A+  A +F
Sbjct: 851 GQPFFASGKGKNANGISEALVHAIDF 876


>gi|167855110|ref|ZP_02477882.1| alanyl-tRNA synthetase [Haemophilus parasuis 29755]
 gi|167853745|gb|EDS24987.1| alanyl-tRNA synthetase [Haemophilus parasuis 29755]
          Length = 853

 Score =  589 bits (1518), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 357/911 (39%), Positives = 512/911 (56%), Gaps = 80/911 (8%)

Query: 81  SSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDD 140
           SS +VP NDPTLLF NAGMNQ+K +FLG    +       RA ++Q+C+RAGGKHNDL++
Sbjct: 3   SSSLVPENDPTLLFTNAGMNQFKDVFLGLDKRS-----YNRATSSQRCVRAGGKHNDLEN 57

Query: 141 VGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVYRLPADRLYATYFGGDEKAG 198
           VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT  +   LP ++L+ T +       
Sbjct: 58  VGYTARHHTFFEMLGNFSFGDYFKPDAIAFAWEFLTSPQWLALPKEKLWVTVY------- 110

Query: 199 LAPDNEARDIWLKFL--PASRVLPFG-------CKDNFWEMGDTGPCGPCSEIHYDRTGN 249
              D+EA DIW + +  PA R++  G         DNFW+MGDTGPCGPC+EI YD   +
Sbjct: 111 -ETDDEAYDIWNREIGVPAERIVRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFYDHGDH 169

Query: 250 --RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKM 307
                      D    IE+WN+VF+QFNR++DG+LK LP   VDTG+G ER++++LQ+  
Sbjct: 170 IWGGPPGSAEEDGDRFIEVWNVVFMQFNRQADGTLKKLPKPSVDTGMGLERISAVLQHVN 229

Query: 308 SNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCP 367
           SNY+ D+F  +   I         +  +   D D  + + RV+ADHIR+ ++ IADG  P
Sbjct: 230 SNYEIDIFQALIKEI---------ASLLNVTDLD--NKSLRVIADHIRSCAYLIADGVMP 278

Query: 368 GNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHIREII 427
            NEGR YVLRRI+RRAVR+G+ +L A+  FF  LV  + K MG     L Q++AHI++ +
Sbjct: 279 SNEGRGYVLRRIIRRAVRHGN-ILGAKSAFFYQLVPTLAKAMGQAGEILTQKQAHIQKAL 337

Query: 428 AAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLV 487
            AEE  F +TL +G+   + A   V+ KVLSG+ AF L+DTYGFPLDLT  +  ERG+ +
Sbjct: 338 KAEEDQFARTLERGLALLEDALAKVENKVLSGEVAFKLYDTYGFPLDLTADVCRERGITI 397

Query: 488 DIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQDHKS 547
           D   F   M   R R++++ N       V+  D +              FK     + ++
Sbjct: 398 DEASFEREMQAQRARAQASSNFGTDYNYVIKVDGST------------EFKGYEVTECEA 445

Query: 548 VIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYG 607
            + A+++  + +E++  G    +VL  ++FY E GGQ+ D G I     +F V + Q YG
Sbjct: 446 TVVALFSNGKAVEAIQSGENAVVVLDRTAFYGESGGQVGDSGVIASEICNFEVNDTQKYG 505

Query: 608 GFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKG 667
               HIG L   +G  SVG++V  +V+  RR  I  NH+ TH+L+ ALR+VLGDHV QKG
Sbjct: 506 QVFGHIGQL--ASGTLSVGDKVKAEVNTTRRHAITLNHSATHLLHSALRQVLGDHVAQKG 563

Query: 668 SVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVF 727
           S+V    LRFDFS G+ +    L  IE I+N +I+  + V ++   L  AK   G  A+F
Sbjct: 564 SLVSENSLRFDFSQGEAISKADLEEIERIINTKIRENIVVTTEVMDLESAKQ-KGAMALF 622

Query: 728 GEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIA 787
           GE Y D VRVV       D+ A        + S ELCGGTH+  T E   F ++SE  +A
Sbjct: 623 GEKYGDRVRVV-------DITA--------AFSVELCGGTHVKQTGEIGLFKVVSEGAVA 667

Query: 788 KGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIE-GSLLEK-NQVRKAQKKVAEENLQK 845
            G+RRI AVT   A         +  +  +  K +  SL+EK  Q+++  KKV +E  Q 
Sbjct: 668 AGVRRIEAVTGENAIGLLHQQQQILNQSAELLKADTASLVEKIQQLQEKSKKVEKELQQL 727

Query: 846 AVKVATETA-----EAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDE 900
             K+A +       +A   NG    + R+E  +DA A+R  V  +  Q G  V+VF+T +
Sbjct: 728 KDKLAAQAGGELAKQAQQINGVNVVVQRLE-NVDAKALRTMVDDLKNQLGSAVIVFAT-Q 785

Query: 901 TTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAM 960
           T  K  +  GV +  D + ++   E +    Q + G+ G G+  +A   G+    +T A+
Sbjct: 786 TDEKVNLIVGVTK--DLTDKVNAGELVGLMAQEVGGKGG-GRADMAMAGGSQPENITQAL 842

Query: 961 DLAAEFAAMKL 971
           ++A  +   KL
Sbjct: 843 NVATNWIQAKL 853


>gi|455738443|ref|YP_007504709.1| Alanyl-tRNA synthetase [Morganella morganii subsp. morganii KT]
 gi|455420006|gb|AGG30336.1| Alanyl-tRNA synthetase [Morganella morganii subsp. morganii KT]
          Length = 875

 Score =  589 bits (1518), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 356/924 (38%), Positives = 522/924 (56%), Gaps = 91/924 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSK--L 119
           ++R  F  FF  K H   +SS +VP NDPTLLF NAGMNQ+K +FLG       L K   
Sbjct: 7   EIRQAFLDFFHTKGHQIVQSSSLVPNNDPTLLFTNAGMNQFKDVFLG-------LDKRPY 59

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           TRA   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI +AWELLT  +
Sbjct: 60  TRATTAQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAINFAWELLTGKE 119

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFW 228
            + LP ++L+ T +        A D+EA +IW     +PA R++  G         DNFW
Sbjct: 120 WFNLPKEKLWVTVY--------ATDDEAYNIWKDEVGVPAERIIRIGDNKGAQYASDNFW 171

Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
           +MGDTGPCGPC+EI +D   +           D    IEIWNIVF+QFNR+SDG+L+PLP
Sbjct: 172 QMGDTGPCGPCTEIFFDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQSDGTLEPLP 231

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
              VDTG+G ER+T++LQ+  SNYD D+F  +   + + TGA   + K           +
Sbjct: 232 KPSVDTGMGLERITAVLQHVNSNYDIDLFRKLIADVAKVTGADDLTSK-----------S 280

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            RV+ADHIR+ +F I DG  P NEGR YVLRRI+RRAVR+G  +L A+D FF  LV  ++
Sbjct: 281 LRVIADHIRSCAFLICDGVIPSNEGRGYVLRRIIRRAVRHGY-MLGAKDTFFYKLVAPLI 339

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
            VMG    EL ++   + +++ +EE  F +TL +G++        + G  LSG+ AF L+
Sbjct: 340 DVMGSAGEELARQRVMVEKVLKSEEEQFARTLERGLQLLDDELASLTGDTLSGEAAFRLY 399

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFPLDLT  +  ER L VD  GF  AM+E R R+R  +N   G     D ++   + 
Sbjct: 400 DTYGFPLDLTADVCRERNLKVDEAGFEAAMEEQRRRAR--ENSGFGA----DYNSLIKVD 453

Query: 527 KRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           KR   +  D        +  + I A+Y   + +  +  G+E  ++L  ++FYAE GGQ+ 
Sbjct: 454 KRSDFSGYD------HNEQAATIVALYKEGQPVTELNAGDEGLVILDKTAFYAESGGQVG 507

Query: 587 DEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
           D G +      F V + Q YG  + H G +   +G+ +V  ++  K+D +RR  I  NH+
Sbjct: 508 DTGVLSSNDAQFSVLDTQKYGQAIGHAGRVD--SGKLTVNHKITAKIDEERRNAIRLNHS 565

Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD 706
            TH+++ ALR+VLG+HV QKGS+V  + LRFDFSH + + P  +R +E++VN +I+    
Sbjct: 566 ATHLMHAALRQVLGEHVSQKGSLVNDKYLRFDFSHFEAMTPAQIREVEALVNAEIRKNEP 625

Query: 707 VFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGG 766
           V ++   L EAK   G  A+FGE Y + VRV+++G                  S ELCGG
Sbjct: 626 VVTELMDLEEAKA-KGAMALFGEKYDERVRVLSMG----------------DFSTELCGG 668

Query: 767 THLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYK-------AFEAACSLEK--EVDD 817
           TH + T +   F ++SE   A GIRRI AVT   A +       A  A   L K  E   
Sbjct: 669 THAARTGDIGLFRIISESATAAGIRRIEAVTGSGALESVNQQSDALSAVAQLVKSDEAGV 728

Query: 818 ASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATE-TAEAAASNGKPFCISRVEVGLDAA 876
           + K++ +L   +++R  +K++ +   Q+A + ++  T +A + NG    + ++    +  
Sbjct: 729 SEKVKAAL---DKIRTLEKELQQLKEQQAAQESSSMTKDAVSVNGVKLLVKQL-TNAEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q    ++V ST  + +K  + AGV +  D + +++  E +    + + G
Sbjct: 785 MLRTMVDDLKNQLSSGIIVLST-ISDDKVSLIAGVTK--DLTGKVKAGELVAFIAEQIGG 841

Query: 937 RCGKGKGGLASGQGTDAAQVTPAM 960
           + G G+  +A   GTD A +  AM
Sbjct: 842 KGG-GRPDMAQAGGTDTAALPAAM 864


>gi|365122418|ref|ZP_09339321.1| alanyl-tRNA synthetase [Tannerella sp. 6_1_58FAA_CT1]
 gi|363642658|gb|EHL82004.1| alanyl-tRNA synthetase [Tannerella sp. 6_1_58FAA_CT1]
          Length = 873

 Score =  588 bits (1517), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 327/751 (43%), Positives = 439/751 (58%), Gaps = 61/751 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R++F  FF  K H    S+P+V  +DPTL+F NAGMNQ+K I LG        ++ 
Sbjct: 4   AKEIRESFKSFFNSKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGNVP-----ARY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI+WAWE L  + 
Sbjct: 59  KRVADSQKCLRVSGKHNDLEEVGLDTYHHTMFEMLGNWSFGDYFKKEAIDWAWEYLVDIL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           ++  DRLYAT F G    GL  DNEA   W K LPAS ++    KDNFWEMGDTGPCGPC
Sbjct: 119 KIDPDRLYATVFEGYAPEGLERDNEAASYWEKHLPASHIINGNRKDNFWEMGDTGPCGPC 178

Query: 240 SEIHYDRTGNR-----DAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D   +      D  +LVN   P  IEIWN+VF+Q+NR++DGSL+PLPAK +DTG+
Sbjct: 179 SEIHIDLRSDAERAQIDGVTLVNESHPQVIEIWNLVFMQYNRKADGSLEPLPAKVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF PI  AI Q  G      K G D   + D+A RV+ADH+
Sbjct: 239 GFERLCMALQGKTSNYDTDVFQPIIGAIGQLCGK-----KYGED--RQADIAMRVIADHV 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++F+I DG  P N    YV+RRILRRAVRYG   L     F   L+  ++  MGD +P
Sbjct: 292 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQHQAFIYTLIPTLIDTMGDAYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG---KVLSGQDAFILWDTYGF 471
           EL  ++  I ++I  EE SF +TL  G++   K   D +      ++G+DAF L+DTYGF
Sbjct: 352 ELISQKILIEKVIKEEEESFLRTLATGMKLLDKVMADTKEAGMDCINGKDAFTLYDTYGF 411

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+ +E GL VD + F+  M + +ER+R+A   + G  +++       +   G  
Sbjct: 412 PLDLTELILKENGLSVDTKEFDAQMQQQKERARNAAAIETGDWVIVKEGEPRFI---GYD 468

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            T+   + + ++  K   K +Y                IVL  + FYAE GGQ+ D G +
Sbjct: 469 FTECDAEILRYRKIKQKNKELYQ---------------IVLDQTPFYAESGGQVGDTGTL 513

Query: 592 EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHML 651
            G   +  + N +      IHI           +   +   ++ + R   A NH+ TH+L
Sbjct: 514 TGEGETIKIINTKKENNLSIHISEKLPK----DITATLRAVINKEARLATACNHSATHLL 569

Query: 652 NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS-K 710
           + ALR VLG HV+QKGS+V P+ LRFDFSH + V  E LR +E + N +++  + +   +
Sbjct: 570 HEALRTVLGTHVEQKGSLVTPDILRFDFSHFQKVTDEELRLVEQLANRKVRQAIPLNEHR 629

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
              +AEAK + G  A+FGE Y D VRV+  G                  S ELCGGTH++
Sbjct: 630 NVPIAEAKQM-GAMALFGEKYGDEVRVIQYGS-----------------SIELCGGTHVA 671

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVTTGLA 801
           NT       ++SE  IA G+RRI AV+   A
Sbjct: 672 NTGNIGMIRIISESSIAAGVRRIEAVSAAKA 702


>gi|409397305|ref|ZP_11248225.1| alanyl-tRNA ligase [Pseudomonas sp. Chol1]
 gi|409398323|ref|ZP_11249137.1| alanyl-tRNA ligase [Pseudomonas sp. Chol1]
 gi|409117253|gb|EKM93688.1| alanyl-tRNA ligase [Pseudomonas sp. Chol1]
 gi|409118189|gb|EKM94593.1| alanyl-tRNA ligase [Pseudomonas sp. Chol1]
          Length = 874

 Score =  588 bits (1517), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 368/947 (38%), Positives = 515/947 (54%), Gaps = 110/947 (11%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F  FFE+K H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLSFFEEKGHTRVASSSLIPANDPTLLFTNAGMNQFKDCFLGL-----EKRAY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           TRA  +QKC+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT  K
Sbjct: 58  TRATTSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAITYAWEFLTSEK 117

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFW 228
              LP ++L+ T +        A D+EA DIW K   +PA R++  G         DNFW
Sbjct: 118 WLNLPKEKLWVTVY--------ATDDEAYDIWTKEVGIPAERMVRIGDNKGAPYASDNFW 169

Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
            MGDTGPCGPC+EI +D   +           D    IEIWN VF+QFNR +DG L PLP
Sbjct: 170 AMGDTGPCGPCTEIFFDHGEHIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLP 229

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
           A  VDTG+G ER++++LQ+  SNY+ D+F  +  A  +A G            A++   +
Sbjct: 230 APSVDTGMGLERISAVLQHVNSNYEIDLFQSLLKAAAEAIGC-----------ANEGQAS 278

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            +VVADHIR+  F IADG  P NEGR YVLRRI+RRA R+G++ L A+  FF  +V  +V
Sbjct: 279 LKVVADHIRSCGFLIADGVTPSNEGRGYVLRRIIRRACRHGNK-LGARGSFFYRIVAALV 337

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
             MG+ FPELKQ++AHI  ++  EE  F KTL +G++  ++   ++ G ++ G   F L+
Sbjct: 338 AEMGEAFPELKQQQAHIERVLKNEEEQFAKTLEQGLKILEQDLAELSGSIIPGDVVFKLY 397

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFP+DLT  +A ER L +D EGF   M   RER+RSA       A  MD ++     
Sbjct: 398 DTYGFPVDLTADIARERELTLDEEGFEREMQAQRERARSAS------AFGMDYNS----- 446

Query: 527 KRGVLATDDSFKFIWFQDH--KSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
              ++  +   +F  +Q    +  + A++     ++S+  G E  +VL  + FYAE GGQ
Sbjct: 447 ---LVKVEGETRFTGYQGTVGQGTVLALFKEGMAVDSLSAGEEGVVVLDQTPFYAESGGQ 503

Query: 585 IFDEGFI--EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIA 642
           + D G++  EGL   F VR+    GG  +H G L   +G   VG  V   VD   R+  A
Sbjct: 504 VGDCGYLVAEGL--RFDVRDTSKAGGAFLHHGILD--SGNLRVGSSVDATVDASVRQATA 559

Query: 643 PNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIK 702
            NH+ TH+L+ ALRE LG+HV QKGS+V  ++LRFDFSH + + P  L+ +E  VN +I+
Sbjct: 560 LNHSATHLLHAALRETLGEHVSQKGSLVDSQRLRFDFSHFEAIKPAQLKALEDKVNAEIR 619

Query: 703 AELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAE 762
               V  +E  +  AK   G  A+FGE Y D VRV+++G                  S E
Sbjct: 620 RNTAVDVEETDIDTAKA-KGAMALFGEKYGDTVRVLSMGG---------------GFSVE 663

Query: 763 LCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIE 822
           LCGGTH+S T +   F ++SE G+A G+RRI AVT   A      A    KE   AS ++
Sbjct: 664 LCGGTHVSRTGDIGLFKIVSEGGVAAGVRRIEAVTGSQALAYLNDAEEQLKEA--ASLVK 721

Query: 823 GSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEV----------- 871
           GS   +  +      V E N Q   ++    A+AA++ G     S +E+           
Sbjct: 722 GS---RENLLDKLAGVLERNRQLEKELEQLKAKAASAAGDDLAGSAIELQGVRVLAARLD 778

Query: 872 GLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEK-------SDQSKQLEVS 924
           GLD  A+   V ++  + G  V++    +  +K V+ AGV +         D  KQ   +
Sbjct: 779 GLDGKALLALVDQLKNKLGSAVILLGGVQ-DDKVVLVAGVTQDLTARFKAGDLMKQAAAA 837

Query: 925 EWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
                  +P           +A G G++  ++  A+ LA  F    L
Sbjct: 838 VGGKGGGRP----------DMAQGGGSEPGRLDDALGLARSFVEQGL 874


>gi|26991160|ref|NP_746585.1| alanyl-tRNA synthetase [Pseudomonas putida KT2440]
 gi|37999403|sp|Q88EI8.1|SYA_PSEPK RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|24986204|gb|AAN70049.1|AE016644_3 alanyl-tRNA synthetase [Pseudomonas putida KT2440]
          Length = 874

 Score =  588 bits (1517), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 353/895 (39%), Positives = 507/895 (56%), Gaps = 93/895 (10%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F +FFE++ H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLRFFEEQGHTRVASSSLIPNNDPTLLFTNAGMNQFKDCFLGA-----EKRAY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           TRA ++QKC+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AW  LT  +
Sbjct: 58  TRAVSSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAITFAWTFLTSEQ 117

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFW 228
              LP ++L+ T +        A D+EA DIW K   +PA R++  G         DNFW
Sbjct: 118 WLNLPKEKLWVTVY--------ATDDEAYDIWTKEVGVPAERMVRIGDNKGAPYASDNFW 169

Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
            MGDTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG L PLP
Sbjct: 170 TMGDTGPCGPCTEIFYDHGPDIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLP 229

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
           A  VDTG+G ER++++LQ+  SNY+ D+F  +  A  +A G            ++    +
Sbjct: 230 APSVDTGMGLERVSAVLQHVHSNYEIDLFQNLLAAAAKAIGC-----------SNDGQAS 278

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            +VVADHIR+  F IADG  P NEGR YVLRRI+RRA R+G++ L A+  FF  +V  + 
Sbjct: 279 LKVVADHIRSCGFLIADGVLPSNEGRGYVLRRIIRRACRHGNK-LGAKGSFFYQIVAALA 337

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
             MG+ FPELK ++AHI  ++ AEE  F KTL +G+   ++    ++G V+ G   F L+
Sbjct: 338 AEMGEAFPELKSQQAHIERVLKAEEEQFAKTLEQGLRILEQDLAQLKGDVVPGDVVFKLY 397

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFP+DLT  +A ER L +D  GF   MD  RER+RSA       A  MD ++     
Sbjct: 398 DTYGFPMDLTADIARERELTIDEAGFEREMDAQRERARSAS------AFGMDYNS----- 446

Query: 527 KRGVLATDDSFKFIWFQ--DHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
              ++  D + +F+ +   + +  I A+Y   + ++ +  G E  +VL  + FYAE GGQ
Sbjct: 447 ---LVKVDSATEFLGYDATEGQGKIIALYKDGQSVDQLGEGEEGVVVLDRTPFYAESGGQ 503

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           + D GF++     F VR+    GG  +H G +T GA    +G  V  KVD D +   + N
Sbjct: 504 VGDTGFLQAGAARFDVRDTTKTGGAFLHHGVVTSGA--LVIGSPVEAKVDADVQHATSLN 561

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ ALR+VLG+HV QKGS+V  ++LRFDFSH + V PE ++++E IVN +I+  
Sbjct: 562 HSATHLLHEALRQVLGEHVQQKGSLVDSQRLRFDFSHFEAVKPEQIKQLEDIVNREIRKN 621

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
             V ++   +  AK   G  A+FGE Y D VRV+++G                  S ELC
Sbjct: 622 TPVETELTDIETAKA-KGAMALFGEKYGDTVRVLSMGG---------------DFSVELC 665

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK-IEG 823
           GG H   T +   F ++SE G+A G+RRI AVT      A     + E++V +A++ ++G
Sbjct: 666 GGIHAKRTGDISLFKIISEGGVASGVRRIEAVT---GAAALAYLNAAEEQVKEAAQLVKG 722

Query: 824 SLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEV-----------G 872
           +   ++ +      V E N Q   ++    A+AA++ G     + VEV           G
Sbjct: 723 N---RDNLIDKLSAVLERNRQLEKQLEQLQAKAASAAGDDLSNAAVEVKGAKVLAARLDG 779

Query: 873 LDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWL 927
            D  A+   V ++  + G  V++  + E   K V+ AGV +  D S QL+  + +
Sbjct: 780 QDGKALLALVDQLKNKLGHAVILLGS-EHEGKVVLVAGVTK--DLSSQLKAGDLM 831


>gi|408372246|ref|ZP_11169988.1| alanyl-tRNA ligase [Galbibacter sp. ck-I2-15]
 gi|407742316|gb|EKF53921.1| alanyl-tRNA ligase [Galbibacter sp. ck-I2-15]
          Length = 873

 Score =  588 bits (1517), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 349/860 (40%), Positives = 488/860 (56%), Gaps = 66/860 (7%)

Query: 63  VRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRA 122
           +R  F  FF +K H    S+P+V  +DPTL+F NAGMNQ+K  FLG   P ++     R 
Sbjct: 7   IRKKFLDFFNEKEHAIVPSAPMVIKDDPTLMFTNAGMNQFKEYFLGNKAPKSK-----RV 61

Query: 123 CNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLP 182
            +TQKC+R  GKHNDL++VGKDTYHHT FEMLGNWSFGDYFK EAI WAWELLT+VY + 
Sbjct: 62  TDTQKCLRVSGKHNDLEEVGKDTYHHTMFEMLGNWSFGDYFKKEAISWAWELLTEVYGID 121

Query: 183 ADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPCSEI 242
            D +Y T F G +  GL  D EA D W   +   R++    KDNFWEMGD GPCGP SEI
Sbjct: 122 KDIIYVTVFEGSDSDGLPLDQEAYDFWKAIVAEDRIILGNKKDNFWEMGDQGPCGPSSEI 181

Query: 243 HYD-RTGNRDA----ASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFE 297
           H D R+  + A    ASLVN D P  +EIWN+VFI+FNR++DG+L+ L  +HVDTG+GFE
Sbjct: 182 HVDIRSAEQRAEIPGASLVNMDHPQVVEIWNLVFIEFNRKADGALEKLAEQHVDTGMGFE 241

Query: 298 RLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTL 357
           RL+ +LQ K SNYDTDVF PI   I+  T     S + G +  ++ D+A RV+ADH+R +
Sbjct: 242 RLSMVLQGKTSNYDTDVFTPIIREIETIT-----SSEYGVN--EQTDIAIRVIADHVRAV 294

Query: 358 SFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELK 417
           +FAIADG  P N G  YV+RRILRRA+RYG   L  ++ F   LV+ + K M + FPELK
Sbjct: 295 AFAIADGQLPSNTGAGYVIRRILRRAIRYGFTFLNQKEAFIYKLVDTLSKQMQEFFPELK 354

Query: 418 QREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQ 477
           +++  I  +I  EE SF +TL +G+       ++ +G  + G  AF L+DT+GFP+DLT 
Sbjct: 355 KQKNIIYNVIKEEENSFLRTLAQGLLLLDTVIKENKGSEIPGDKAFELYDTFGFPIDLTA 414

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSF 537
           L+ +E+G  +D EGF  A+++ + RSR+A   + G                 +L  D   
Sbjct: 415 LILQEKGYTLDQEGFKAALEKQKNRSRAATKVETG--------------DWEILIDDPVE 460

Query: 538 KFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFGS 597
           +F+ +   K+ +K   T    +ES   G    +V   + FYAE GGQ+ D+G+++   G 
Sbjct: 461 EFVGYDLLKTPVK--LTRYRKVESKKEGTMYQLVFNITPFYAEGGGQVGDKGYLQSSNGD 518

Query: 598 F-YVRNVQIYGGFVIHIGS-LTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFAL 655
             Y+ + +     +IH+   L E     ++ E     VD ++R+  + NH+ TH+L+ AL
Sbjct: 519 LVYIVDTKKENNLIIHLAKHLPE-----NLYETFTAVVDSNQRERSSANHSATHLLHQAL 573

Query: 656 REVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLA 715
           R VLGDHV+QKGS+V    LRFDFSH   +  E L  +   VN +IK  L +     T  
Sbjct: 574 RSVLGDHVEQKGSMVRSGYLRFDFSHFSKLTSEELSAVADFVNARIKEHLPLEENRQTPY 633

Query: 716 EAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREA 775
                NG  A+FGE Y D VR +  G                  S ELCGGTH+ NTR+ 
Sbjct: 634 HLAIENGAMALFGEKYGDVVRTIKFGD-----------------SIELCGGTHVKNTRDI 676

Query: 776 EAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEG-----SLLEKNQ 830
             F + SE  +A G+RRI A+T   A + F       + V DA K        +++   +
Sbjct: 677 WHFIITSEGAVAAGVRRIEAITYDTAQEYFTTQSETFQRVKDALKGNSADPLKAVMTLQE 736

Query: 831 VRKAQKKVAEENLQ-KAVKVATETAEAAAS-NGKPFCISRVEVGLDAAAVREAVLKVIEQ 888
              A KK  E+ L+ KA  + TE   +  S NG  F  +  EV LD  ++++   ++  +
Sbjct: 737 ENAALKKQVEQLLKDKAKGLKTELKMSLESINGVEFLAT--EVDLDQGSIKDLAFELGSE 794

Query: 889 KGMPVMVFSTDETTNKAVVC 908
                ++F ++      + C
Sbjct: 795 YDNLFLLFGSNHNGKAMLSC 814


>gi|440229532|ref|YP_007343325.1| alanyl-tRNA synthetase [Serratia marcescens FGI94]
 gi|440051237|gb|AGB81140.1| alanyl-tRNA synthetase [Serratia marcescens FGI94]
          Length = 875

 Score =  588 bits (1517), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 358/935 (38%), Positives = 525/935 (56%), Gaps = 91/935 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG           TR
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGL-----DKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWELLT    +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIAYAWELLTGENWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP ++L+ T +          D+EA  IW     +PA R++  G         DNFW+M
Sbjct: 122 NLPKEKLWVTVY--------ETDDEAFAIWQNEIGIPAERIIRIGDNKGAPFASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG++ PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMLPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+T++LQ+  SNY+ D+F  +  A+ + TGA     K           + R
Sbjct: 234 SVDTGMGLERITAVLQHVNSNYEIDLFRTLIAAVAKVTGATDLDNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F ++DG  P NE R YVLRRI+RRAVR+G+ +L A+D FF  LV  +++V
Sbjct: 283 VIADHIRSCAFLVSDGVIPSNENRGYVLRRIIRRAVRHGN-MLGAKDTFFYKLVAPLIEV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    ELK ++A + +++  EE  F +TL +G+    +    +QG  L G+ AF L+DT
Sbjct: 342 MGPAAEELKSQQAMVEQVLKTEEEQFARTLERGLALLDEELSKLQGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ERGL VD  GF+ AM+  R R+R +    A    ++  D T+     
Sbjct: 402 YGFPVDLTADVCRERGLKVDEAGFDEAMEAQRRRARESSGFGADYNSMIRVDGTS----- 456

Query: 529 GVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
                    +F  + DH  +   + A++   + +E++  G +  +VL S+ FY E GGQ+
Sbjct: 457 ---------EFCGY-DHDKLQAKVTALFRDGQPVEAIHAGEDAVVVLDSTPFYGESGGQV 506

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G ++     F V + Q YG  + H G L +G     VG+ V  ++D  RR  I  NH
Sbjct: 507 GDKGVLKAAAAEFVVADTQKYGQALGHQGKLAQGT--LKVGDSVDAEIDQARRNRIRLNH 564

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+L+ ALR+VLG+HV QKGS+V  + LRFDFSH + + PE LR +E +VN+Q++  L
Sbjct: 565 SATHLLHEALRQVLGEHVAQKGSLVNDKYLRFDFSHFEAIKPEQLRAVEDLVNQQVRRNL 624

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            V ++   L +AK   G  A+FGE Y D VRV+ +G                  S ELCG
Sbjct: 625 PVQTEVMALEDAKE-KGAMALFGEKYDDHVRVLTMG----------------DFSTELCG 667

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEG-- 823
           GTH++ T +   F + SE G A GIRRI A+T   A  +      L + V  A  ++G  
Sbjct: 668 GTHVARTGDIGLFRIQSESGTAAGIRRIEALTGEGAIASLHQQSDLLQGV--AHLVKGDS 725

Query: 824 -SLLEKNQVRKAQKKVAEENLQK------AVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            +L +K +    + +V E+ LQ+      A + A+ +++A   NG    +S+++  ++  
Sbjct: 726 NNLTDKVRAVLDRSRVLEKELQQLKDQQAASESASLSSKAQLVNGVKLLVSQLD-NVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E + +  Q + G
Sbjct: 785 MLRTMVDDLKNQLGSAIIVLAT-AADGKVSLIAGVTK--DLTDRVKAGELIGSVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           + G G+  +A   G+D   +  A+     + A KL
Sbjct: 842 KGG-GRPDMAQAGGSDVDALPAALGSVEAWVASKL 875


>gi|419831874|ref|ZP_14355341.1| alanine--tRNA ligase [Vibrio cholerae HC-61A2]
 gi|424635482|ref|ZP_18073506.1| alanyl-tRNA synthetase [Vibrio cholerae HC-55A1]
 gi|408027652|gb|EKG64614.1| alanyl-tRNA synthetase [Vibrio cholerae HC-55A1]
 gi|408652281|gb|EKL23506.1| alanine--tRNA ligase [Vibrio cholerae HC-61A2]
          Length = 853

 Score =  588 bits (1517), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 357/921 (38%), Positives = 514/921 (55%), Gaps = 80/921 (8%)

Query: 63  VRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRA 122
           +R  F  FFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG      +    TRA
Sbjct: 1   MRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGL-----EKRAYTRA 55

Query: 123 CNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLP 182
              Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI++AWE LT V +LP
Sbjct: 56  TTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQLP 115

Query: 183 ADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMGD 232
            +RL  T +          D+EA DIW K   +PA R++  G K        DNFW+MGD
Sbjct: 116 KERLLVTVY--------ETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMGD 167

Query: 233 TGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHV 290
           TGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG+++PLP   V
Sbjct: 168 TGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSV 227

Query: 291 DTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVV 350
           DTG+G ER+++I+Q   SNY+ DVF  +   I+ A GA  Y         D  + + RVV
Sbjct: 228 DTGMGIERISAIMQGVHSNYEIDVFQTL---IKAAAGAIGYQ--------DLTNQSLRVV 276

Query: 351 ADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMG 410
           ADHIR+ +F I DG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF+ LV  + +VMG
Sbjct: 277 ADHIRSCAFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGAFFHKLVGPLAEVMG 335

Query: 411 DVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYG 470
               ELK+++A + +++  EE +FG+TL +G+     A   + G+VL G+  F L+DTYG
Sbjct: 336 TAGVELKKQQALVEKVLRIEEENFGRTLDRGMSILNDALDQLSGQVLDGETVFKLYDTYG 395

Query: 471 FPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGV 530
           FP DLT  +A ERG  +D  GF  AM+E R+R+R A      G    D ++         
Sbjct: 396 FPADLTNDVARERGFSIDEAGFEQAMEEQRQRAREA------GQFGTDYNSLIK------ 443

Query: 531 LATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGF 590
            +T+  F        +SV++ ++     + ++  G++  IVL ++ FYAE GGQ  D G 
Sbjct: 444 SSTNTEFCGYTASRGQSVVREMFVEGAEVSTLSAGDKAIIVLDNTPFYAESGGQCGDTGV 503

Query: 591 IEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHM 650
           ++   G F+V + Q  G  + H G L +G    + G++V   VD  RR  I+ NH+ TH+
Sbjct: 504 LKTDAGIFHVEDTQKLGNAIAHHGVLAQGV--LATGDQVDAIVDEKRRAAISLNHSATHL 561

Query: 651 LNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSK 710
           L+ ALR+VLG+HV QKGS+V  E LRFDFSH + +    ++ +E +VN++++    + + 
Sbjct: 562 LHAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTAAEIKEVERLVNQEVRRNHSIETN 621

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
              + EAK   G  A+FGE Y D VRV+++G                  S ELCGG H S
Sbjct: 622 IMNIDEAKA-KGAMALFGEKYDDQVRVLSMG----------------DFSTELCGGIHAS 664

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKNQ 830
           NT +   F ++SE GIA GIRRI AVT   A    +A  +           +  LLEK +
Sbjct: 665 NTGDIGLFKIISEGGIAAGIRRIEAVTGEGALDYLDAQQAQHDAKVSEMAAKAKLLEK-E 723

Query: 831 VRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKG 890
           +++ + K+A +     +    + A      G    ++++  G D  A+R  V  +  Q  
Sbjct: 724 IQQLKDKLAAKESAGLINQVKQIA------GVNVLVAQLN-GADNKALRGMVDDLKNQLS 776

Query: 891 MPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQG 950
             +++   +    K  + AGV   +D + +++  E +      + G+ G G+  +A   G
Sbjct: 777 SGIIMLG-NVAEGKVGLIAGVT--NDLTNKVKAGELVNMVALQVGGK-GGGRPDMAQAGG 832

Query: 951 TDAAQVTPAMDLAAEFAAMKL 971
           TDA  +  A++    + A +L
Sbjct: 833 TDAHALPSALESVDAWIAERL 853


>gi|302132483|ref|ZP_07258473.1| alanyl-tRNA synthetase [Pseudomonas syringae pv. tomato NCPPB 1108]
          Length = 874

 Score =  588 bits (1517), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 362/931 (38%), Positives = 523/931 (56%), Gaps = 88/931 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F  FFE++ H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLGFFEEQGHTRVPSSSLIPGNDPTLLFTNAGMNQFKDCFLGQ-----EKRAY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           TRA  +QKC+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AW  LT  K
Sbjct: 58  TRAVTSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAITYAWTFLTSEK 117

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFW 228
              LP ++L+ T +        A D+EA DIW K +  PA R++  G         DNFW
Sbjct: 118 WLNLPKEKLWVTVY--------ATDDEAYDIWTKEIGVPAERMVRIGDNKGAPYASDNFW 169

Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
            MGDTGPCGPCSEI +D   +           D    IEIWN VF+QFNR +DG L PLP
Sbjct: 170 TMGDTGPCGPCSEIFFDHGADIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLP 229

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
           A  VDTG+G ER++++LQ+  SNY+ D+F  +  A   A G            ++    +
Sbjct: 230 APSVDTGMGLERVSAVLQHVHSNYEIDLFQSLLTASANAIGC-----------SNDNQAS 278

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            +VVADHIR+  F IADG  P +EGR YVLRRI+RRA R+G++ L A+  FF  +V  +V
Sbjct: 279 LKVVADHIRSCGFLIADGVLPSSEGRGYVLRRIIRRACRHGNK-LGAKGSFFYQIVAALV 337

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
             MG  FPEL Q+++HI  ++  EE  F KTL +G++  ++   +++G V+ G+  F L+
Sbjct: 338 AEMGSAFPELVQQQSHIERVLRGEEEQFAKTLEQGLKIIEQDLAELKGTVVPGEIVFKLY 397

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFP+DLT  +A ER L +D EGF   M+  R R+RSA       +  MD ++     
Sbjct: 398 DTYGFPMDLTGDIARERNLTLDEEGFEREMEAQRVRARSAS------SFGMDYNS----- 446

Query: 527 KRGVLATDDSFKFIWFQ--DHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
              ++  D + +F  +      + + A+Y   + +  +  G E  ++L ++ FYAE GGQ
Sbjct: 447 ---LVKVDVATQFTGYSATTGSASVVALYKDGQSVTHLNEGEEGVVILDTTPFYAESGGQ 503

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           I D GF+      F V +    GG  +H G +  G+   SVG +V  +V  + R     N
Sbjct: 504 IGDSGFLLAGDTRFDVSDTTKTGGAFLHHGVVASGS--LSVGVQVETQVADEVRDATKLN 561

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ ALR+VLG+HV QKGS+V  ++LRFDFSH + + PE LR +E IVN +I+  
Sbjct: 562 HSATHLLHAALRQVLGEHVQQKGSLVDSQRLRFDFSHFESIKPEQLRALEDIVNAEIRKN 621

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
             V ++E  +  AK   G  A+FGE Y D VRV+++G +                S ELC
Sbjct: 622 TPVVTEETDIDTAKK-KGAMALFGEKYGDSVRVLSMGGE---------------FSVELC 665

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEG- 823
           GG H S T +   F ++SE G+A G+RRI AVT   A     +A    KE   A+ ++G 
Sbjct: 666 GGIHASRTGDISLFKIVSEGGVAAGVRRIEAVTGAAALAWLNSAEDQLKEA--ATLVKGN 723

Query: 824 --SLLEKNQVRKAQKKVAEENLQ----KAVKVATETAEAAASN--GKPFCISRVEVGLDA 875
             +LL+K      + ++ E+ L+    KA   A +   +AA +  G     +R++ G D 
Sbjct: 724 RDNLLDKLTAVLERNRLLEKQLEQLQAKAASAAGDDLSSAALDVKGVKVLATRLD-GQDG 782

Query: 876 AAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLK 935
            A+   V ++  + G  V++  +    +K V+ AGV +  D + QL+  + +  A   + 
Sbjct: 783 KALLALVDQLKNKLGRAVILLGSVH-EDKVVLVAGVTK--DLTGQLKAGDLMKQAATAVG 839

Query: 936 GRCGKGKGGLASGQGTDAAQVTPAMDLAAEF 966
           G+ G G+  +A G G DA  +  A+ LA  F
Sbjct: 840 GK-GGGRPDMAQGGGVDATALDSALALAVPF 869


>gi|325271425|ref|ZP_08137952.1| alanyl-tRNA synthetase [Pseudomonas sp. TJI-51]
 gi|324103458|gb|EGC00778.1| alanyl-tRNA synthetase [Pseudomonas sp. TJI-51]
          Length = 874

 Score =  588 bits (1517), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 353/895 (39%), Positives = 506/895 (56%), Gaps = 93/895 (10%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F +FFE++ H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLRFFEEQGHTRVASSSLIPNNDPTLLFTNAGMNQFKDCFLGA-----EKRAY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           TRA ++QKC+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AW  LT  K
Sbjct: 58  TRAVSSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAITFAWTFLTSEK 117

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFW 228
              LP ++L+ T +        A D+EA DIW K   +PA R++  G         DNFW
Sbjct: 118 WLNLPKEKLWVTVY--------ATDDEAYDIWTKEVGVPAERMVRIGDNKGAPYASDNFW 169

Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
            MGDTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG L PLP
Sbjct: 170 TMGDTGPCGPCTEIFYDHGPDIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLP 229

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
           A  VDTG+G ER++++LQ+  SNY+ D+F  +  A  +A G            ++    +
Sbjct: 230 APSVDTGMGLERVSAVLQHVHSNYEIDLFQNLLAAAAKAIGC-----------SNDGQAS 278

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            +VVADHIR+  F IADG  P NEGR YVLRRI+RRA R+G++ L A+  FF  +V  +V
Sbjct: 279 LKVVADHIRSCGFLIADGVLPSNEGRGYVLRRIIRRACRHGNK-LGAKGSFFYQIVAALV 337

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
             MG+ FPEL  ++AHI  ++ AEE  F KTL +G+   ++    +QG V+ G   F L+
Sbjct: 338 AEMGEAFPELTSQQAHIERVLKAEEEQFAKTLEQGLRILEQDLAQLQGAVVPGDVVFKLY 397

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFP+DLT  +A ER L +D  GF   MD  RER+RSA       A  MD ++     
Sbjct: 398 DTYGFPMDLTADIARERELTIDEAGFEREMDAQRERARSAS------AFGMDYNS----- 446

Query: 527 KRGVLATDDSFKFIWFQ--DHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
              ++  D + +F+ +   + +  I A+Y   + ++ +  G +  +VL  + FYAE GGQ
Sbjct: 447 ---LVKVDSATEFLGYDATEGQGKIIALYKDGQSVDQLGVGEQGVVVLDRTPFYAESGGQ 503

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           + D G+++     F VR+    GG  +H G +T GA    +G  V  KVD D +   + N
Sbjct: 504 VGDSGYLQAGAARFDVRDTTKTGGAFLHHGVVTSGA--LLIGAPVEAKVDADVQHATSLN 561

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ ALR+VLG+HV QKGS+V  ++LRFDFSH + V PE L+++E IVN +++  
Sbjct: 562 HSATHLLHEALRQVLGEHVQQKGSLVDSQRLRFDFSHFEAVKPEQLKQLEDIVNREVRKN 621

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
             V ++   +  AK   G  A+FGE Y D VRV+ +G                  S ELC
Sbjct: 622 TPVETELTDIETAKA-KGAMALFGEKYGDTVRVLTMGG---------------DFSVELC 665

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK-IEG 823
           GG H   T +   F ++SE G+A G+RRI AVT      A     + E++V +A++ ++G
Sbjct: 666 GGIHAKRTGDISLFKIISEGGVASGVRRIEAVT---GAAALAYLNAAEEQVKEAAQLVKG 722

Query: 824 SLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEV-----------G 872
           +   ++ +      V E N Q   ++    A+AA++ G     + VEV           G
Sbjct: 723 N---RDNLIDKLSAVLERNRQLEKQLEQLQAKAASAAGDDLSNAAVEVKGAKVLAARLDG 779

Query: 873 LDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWL 927
            D  A+   V ++  + G  V++  + E   K V+ AGV +  D S QL+  + +
Sbjct: 780 QDGKALLALVDQLKNKLGHAVILLGS-EHEGKVVLVAGVTK--DLSSQLKAGDLM 831


>gi|255039401|ref|YP_003090022.1| alanyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
 gi|254952157|gb|ACT96857.1| alanyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
          Length = 886

 Score =  588 bits (1517), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 350/928 (37%), Positives = 498/928 (53%), Gaps = 76/928 (8%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H+   S+P+V  NDPTL+F N+GM Q+K  FLG   P ++     R
Sbjct: 5   QIRQAFLDFFRSKEHLIVPSAPLVAKNDPTLMFNNSGMAQFKDFFLGNGTPPSR-----R 59

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
             +TQKC+R  GKHNDL+DVG DTYHHT FEMLGNWSFGDYFK EAI WAWELLT VY+L
Sbjct: 60  IADTQKCLRVSGKHNDLEDVGFDTYHHTMFEMLGNWSFGDYFKKEAIAWAWELLTDVYKL 119

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPCSE 241
           P DRLY + F G+E  G+  D EA D+W   +   R++    KDNFWEMGDTGPCGPCSE
Sbjct: 120 PKDRLYVSVFEGNEADGVPFDQEAWDLWKGIVGEERIILGNKKDNFWEMGDTGPCGPCSE 179

Query: 242 IHYDRTGNRDAA-----SLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGF 296
           IH D     + A     SLVNND P  +EIWN+VF+QF R++DGSL PLP+ HVDTG+GF
Sbjct: 180 IHIDLRSPAEVAEVSGKSLVNNDHPQVVEIWNLVFMQFERKADGSLIPLPSTHVDTGMGF 239

Query: 297 ERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRT 356
           ERL   +Q K SNYDTDVF    + ++  +G      K G +D    D+A RV++DHIR 
Sbjct: 240 ERLCMAIQQKTSNYDTDVFQNTINVLETLSGK-----KYGQNDEPFADIAMRVISDHIRA 294

Query: 357 LSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPEL 416
           +SFAI DG  P N    YV+RRILRRAVRYG   L  Q+ FF+ LV ++ +   DVF EL
Sbjct: 295 VSFAITDGQLPSNVKAGYVIRRILRRAVRYGYSYLGFQEPFFHKLVPVLAEQFKDVFTEL 354

Query: 417 KQREAHIREIIAAEEASFGKTLLKGIEKFKK---AAQDVQGKVLSGQDAFILWDTYGFPL 473
           K +E  +  +I  EE SF +TL  G+++        ++     + G + F L DT+GFP+
Sbjct: 355 KDQEEFVTRVILEEEKSFLRTLESGLKRLDSIIGGLKETGLNTIPGDEVFELSDTFGFPV 414

Query: 474 DLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLAT 533
           DLT L+A E+   +D  G+ +A+ E ++RSR    K+A   I               L  
Sbjct: 415 DLTALIAREKNFRIDEAGYQDALAEQKKRSRQDAAKEATDWI--------------ELRE 460

Query: 534 DDSFKFIWF---QDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGF 590
            D  +F+ +   + H  ++K     ++       G E  IVL  + FYAE GGQ+ D G 
Sbjct: 461 SDGVEFLGYDFEETHSHIVKYRKVKTK------AGEEYHIVLDRTPFYAEMGGQVGDTGA 514

Query: 591 I-------EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAP 643
           +       E    S  + + +      +HI          S    V  +++ +RR  I  
Sbjct: 515 LLLNSGSKEDGARSISIVDTKKENDLFVHISRDKNLDEALSGAGIVTAQINVERRNKIKS 574

Query: 644 NHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKA 703
           NHT TH++  ++REVLG HV QKGS +  E LRFDF+H   V  E LR+IE  VNE+I+ 
Sbjct: 575 NHTATHLMLSSMREVLGTHVSQKGSYLNDEVLRFDFAHFSKVTDEELRKIEDRVNEKIRE 634

Query: 704 ELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAEL 763
            + +  +     +     G  A FGE Y D VR++         + DP+       S EL
Sbjct: 635 NIALEERRNVPIQQALDAGATATFGEKYGDFVRLI---------IFDPK------FSFEL 679

Query: 764 CGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK--- 820
           CGGTH+ +T E   F  +SE  ++ G+RR+ AVT   A +          ++ D  K   
Sbjct: 680 CGGTHVPSTGEIGVFKFISEGSVSAGVRRVEAVTGEKALELMRQQEETLNKIKDLLKGPT 739

Query: 821 -----IEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDA 875
                +E  + E++ ++K    +  E +Q       E  E  ++      + +V+V   A
Sbjct: 740 DLIKAVENLIEERSALQKKISALENEKIQALKTTLVENMETHSTFN--LIVQKVDVP-SA 796

Query: 876 AAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLK 935
            ++++   ++ +Q    + VF   E   K  +   + E       L   + +    + ++
Sbjct: 797 DSLKQLSYELRDQVENLIAVFGA-EIGGKPQLSVFIAENIVAETGLNAGKIVKDLAREIR 855

Query: 936 GRCGKGKGGLASGQGTDAAQVTPAMDLA 963
           G  G G+   A+  G+DA+ +  A++ A
Sbjct: 856 G-GGGGQPFFATAGGSDASGLDVALEKA 882


>gi|281423902|ref|ZP_06254815.1| alanine--tRNA ligase [Prevotella oris F0302]
 gi|281401990|gb|EFB32821.1| alanine--tRNA ligase [Prevotella oris F0302]
          Length = 887

 Score =  588 bits (1516), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 356/931 (38%), Positives = 505/931 (54%), Gaps = 68/931 (7%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A +VR+++ KFFE K H    S+P+V  +DPTL+F NAGMNQ+K I LGT DP     K 
Sbjct: 4   ANEVRESYKKFFEGKGHKIVASAPMVIKDDPTLMFTNAGMNQWKDIILGTKDP----GKD 59

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK  AI++AWE L  V 
Sbjct: 60  VRRVDSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKEGAIDYAWEYLVSVL 119

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
            L  + LY T F G  + GL  D+EA   W K +PA  ++     DNFWEMGDTGPCGPC
Sbjct: 120 HLNPEDLYVTVFEGSPEEGLERDDEAASYWAKHVPADHIINGNKHDNFWEMGDTGPCGPC 179

Query: 240 SEIHYD-RTGNRDAA----SLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           +EIH D RT    A      LVN D+P  IEIWNIVF+Q+NR++DGSL+PLP   +DTG+
Sbjct: 180 TEIHVDSRTPEEKAKMPGRELVNKDNPQVIEIWNIVFMQYNRKADGSLEPLPMHVIDTGM 239

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGAR-------PYSGKVGADDADKVDMAY 347
           GFERL  +LQ+K SNYDTD+F PI   I+  +G +         +G+ G D+ +K+D+A 
Sbjct: 240 GFERLVRMLQDKHSNYDTDIFQPIIKQIEAISGKKYGFTTPTGLNGE-GKDEQEKIDIAM 298

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RVVADH+R ++F+IADG  P N    YV+RRILRRAVRY    L  ++ F   L+ ++V+
Sbjct: 299 RVVADHLRAVAFSIADGQLPSNAKAGYVIRRILRRAVRYAYTFLDQKEAFLYKLLPVLVR 358

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK---VLSGQDAFI 464
            MG  +PEL  ++  I  ++  EE SF +TL KGI        +++      L G  AF 
Sbjct: 359 EMGQAYPELPAQQELIARVMKEEEDSFLRTLEKGINLLNGDMDELKAHGQTELDGTSAFR 418

Query: 465 LWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAA 524
           L+DTYGFPLDLT+L+  E G  VD +GFN  M + + R+R+A       A+V + D    
Sbjct: 419 LFDTYGFPLDLTELICREHGYTVDEKGFNEEMAKQKARARNA-------AVVENGDWEVI 471

Query: 525 LHKRGVLATDDSFKFI-WFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGG 583
                V    D  ++      ++ V +   T  E            IVL  + FY E GG
Sbjct: 472 REGEQVFVGYDYTEYTCHILRYRKVTQKKNTFYE------------IVLDYTPFYGEMGG 519

Query: 584 QIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAP 643
           Q+ D+G +     +  + + +      IHI           +  E +  VD ++R   A 
Sbjct: 520 QVGDQGTLVSENETVEIIDTKRENNQSIHIVKQLPK----DLQAEFMACVDVEKRNGSAA 575

Query: 644 NHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKA 703
           NHT TH+L++AL++VLGDHV+QKGS V P  LRFDFSH + V  E LR++E +VN+ I+ 
Sbjct: 576 NHTATHLLDYALKQVLGDHVEQKGSYVDPTTLRFDFSHFQKVTDEELRQVEKLVNKMIRE 635

Query: 704 ELDVFS-KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAE 762
           +  +   ++  L EAK + G  A+FGE Y D VRVV  G                  S E
Sbjct: 636 DFPLDEHRDTPLEEAKEL-GAVALFGEKYGDKVRVVRFGP-----------------SCE 677

Query: 763 LCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVT----TGLAYKAFEAACSLEKEVDDA 818
            CGG H  +T     F ++SE  +A GIRRI A+T        Y   +    L+   +++
Sbjct: 678 FCGGIHAKSTGRIGFFKIISESSVAAGIRRIEALTGQACEDTIYALQDMMNDLKSMFNNS 737

Query: 819 SKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAV 878
             ++ +L +        +K  E+   +AV+   E     A N     + +  + L+ AA 
Sbjct: 738 KDLKATLKKFIGEHDEMRKEIEKFQAQAVERTKEELLKRAQNVNGVQVIKAVLPLEPAAA 797

Query: 879 REAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRC 938
           ++   K+ E     ++V       NK ++     +   +   L     +  A + ++G  
Sbjct: 798 KDLAFKLRENISENLVVVIGSTAGNKPLLTVMFSDDMVKDHSLNAGTIIREAAKLIQG-G 856

Query: 939 GKGKGGLASGQGTDAAQVTPAMDLAAEFAAM 969
           G G+   A   G +   ++ A+D   E A +
Sbjct: 857 GGGQPHYAQAGGKNLDGISAAVDKVIELANL 887


>gi|395494477|ref|ZP_10426056.1| alanyl-tRNA ligase [Pseudomonas sp. PAMC 25886]
          Length = 872

 Score =  588 bits (1516), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 356/892 (39%), Positives = 507/892 (56%), Gaps = 89/892 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F +FFE++ H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLRFFEEQGHTRVASSSLIPGNDPTLLFTNAGMNQFKDCFLGQ-----EKRAY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           TRA ++QKC+RAGGK++DL++VG    HHTFFEMLGN+SFGDYFK +AI +AW  LT V 
Sbjct: 58  TRATSSQKCVRAGGKNSDLENVGYTARHHTFFEMLGNFSFGDYFKKDAITFAWTFLTGVL 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFWEM 230
           +LP ++L+ T +        A D+EA DIW + +  P  R++  G         DNFW M
Sbjct: 118 KLPKEKLWVTVY--------ATDDEAYDIWTQQIGVPVERMIRIGDNKGAPYASDNFWTM 169

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG L PLPA 
Sbjct: 170 GDTGPCGPCTEIFYDHGADIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLPAP 229

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+++++Q+  SNY+ D+F  +  A   A G            A+    + +
Sbjct: 230 SVDTGMGLERISAVMQHVHSNYEIDLFTNLLSASAAAIGC-----------ANDNQSSLK 278

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           VV+DHIR+  F IADG  P NEGR YVLRRI+RRA R+G++ L A   FF  +V  +V  
Sbjct: 279 VVSDHIRSCGFLIADGVLPSNEGRGYVLRRIIRRACRHGNK-LGATGSFFYKIVAALVAE 337

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MGD FPELKQ++A+I  ++ AEE  F KTL  G++  ++   +++G V+ G   F L+DT
Sbjct: 338 MGDAFPELKQQQANIERVLKAEEEQFSKTLEHGLKILEQDLAELKGTVVPGDVVFKLYDT 397

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +A ER L +D  GF   M+  R R+RSA              ++  L   
Sbjct: 398 YGFPMDLTADIARERELTIDEAGFEREMEAQRVRARSA--------------SSFGLDYN 443

Query: 529 GVLATDDSFKFIWFQDH--KSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
            ++  D +  FI ++     + I AIY   + ++ +  G+E  +VL  + FYAE GGQ+ 
Sbjct: 444 TLVKVDVATSFIGYEATVGSAKIVAIYKDGKSVDVLNEGDEAVVVLDQTPFYAESGGQVG 503

Query: 587 DEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
           D GF+    G F VR+    GG  +H G L    G  +VG  V  +VD D R   A NH+
Sbjct: 504 DCGFLSSTSGRFDVRDTTKTGGAFLHHGVLV--LGNLTVGAPVDTQVDADVRHATALNHS 561

Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD 706
            TH+L+ ALR+VLG+HV QKGS+V  ++LRFDFSH + + PE L+ +E IVN +I+    
Sbjct: 562 ATHLLHAALRQVLGEHVQQKGSLVDSQRLRFDFSHFEAIKPEQLKALEDIVNAEIRKNTP 621

Query: 707 VFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGG 766
           V ++E  +  A+   G  A+FGE Y D VRV+++G                S S ELCGG
Sbjct: 622 VETEETDIETARK-KGAMALFGEKYGDEVRVLSMGG---------------SFSVELCGG 665

Query: 767 THLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLL 826
            H S T +     ++SE G+A G+RRI AVT   A     AA    KE   AS ++GS  
Sbjct: 666 IHASRTGDIGLLKIISEGGVASGVRRIEAVTGAAALAYLNAAEEQLKEA--ASLVKGS-- 721

Query: 827 EKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEV-GLDAAAVR------ 879
            ++ +      V E N Q   ++    A+AA++ G     S ++V G+   AVR      
Sbjct: 722 -RDNLIDKLSGVLERNRQLEKQLEQLQAKAASAAGDDLSASALDVKGVKVLAVRLDGQDG 780

Query: 880 EAVLKVIEQ----KGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWL 927
           +A+L +++Q     G  V++  +    +K V+ AGV +  D + QL+  + +
Sbjct: 781 KALLALVDQLKNKLGRAVILLGSVH-EDKVVLVAGVTK--DLTGQLKAGDLM 829


>gi|410662606|ref|YP_006914977.1| alanyl-tRNA ligase [Simiduia agarivorans SA1 = DSM 21679]
 gi|409024963|gb|AFU97247.1| alanyl-tRNA ligase [Simiduia agarivorans SA1 = DSM 21679]
          Length = 875

 Score =  588 bits (1516), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 358/935 (38%), Positives = 513/935 (54%), Gaps = 86/935 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++RD F KFFE K H    SS ++P NDPTLLF NAGM Q+K +FLG           
Sbjct: 3   SAEIRDAFLKFFESKGHAIVPSSSLIPGNDPTLLFTNAGMVQFKDVFLGD-----DKRPY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           TRA ++Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK E I +AWE LT   
Sbjct: 58  TRAVSSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRETIGYAWEFLTGAE 117

Query: 180 RL--PADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFW 228
            L  P ++L+ T +  DE      D EA DIW K +  PA R++  G         DNFW
Sbjct: 118 HLAIPKEKLWVTVY--DE------DQEAYDIWHKEIGVPAERIIRIGDNKGAKYASDNFW 169

Query: 229 EMGDTGPCGPCSEIHYDR----TGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKP 284
            MGDTGPCGPCSEI YD      G    +   + D    IEIWN VF+QFNR  DG + P
Sbjct: 170 AMGDTGPCGPCSEIFYDHGPEVAGGPPGSP--DEDGDRYIEIWNNVFMQFNRTPDGVMHP 227

Query: 285 LPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVD 344
           LP   VDTG+G ER+++++Q+  SNY+ D+F  +  A  +ATG             D  +
Sbjct: 228 LPKPSVDTGMGLERISAVMQHVHSNYEIDLFQNLLQAAAKATGT-----------TDLSN 276

Query: 345 MAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNI 404
            + RV+ADHIR+ +F + DG  P NEGR YVLRRI+RRA+R+G + L  Q  FF+ LV  
Sbjct: 277 QSLRVIADHIRSCAFLVVDGIVPSNEGRGYVLRRIMRRAIRHGHK-LGQQQPFFHTLVAA 335

Query: 405 VVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFI 464
           +   MG  +PEL +++AHI +++ AEE  F KTL KG+    +A   ++G  L G   F 
Sbjct: 336 LADEMGAAYPELVEQQAHITKVLLAEEEQFAKTLDKGMAVLDQALAQLKGDTLDGLTVFS 395

Query: 465 LWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAA 524
           L+DTYGFP+DLT  +A ERGL +D+  + +AM   RER+R+A      G+  +D   +  
Sbjct: 396 LYDTYGFPVDLTADIARERGLKLDMAAYESAMQAQRERARAA------GSFKVDYSNS-- 447

Query: 525 LHKRGVLATDDSFKFIWFQ--DHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQG 582
                 L  D +  F  +     +  + AI  GS+ + S+  G +  IV+  + FYAE G
Sbjct: 448 ------LKLDGATDFTGYDALAGEGKVVAILKGSDTVASLQAGEQGAIVMDVTPFYAESG 501

Query: 583 GQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIA 642
           GQ  D G++      F V++     G  IH G L +G     VG+ +  +VD + R    
Sbjct: 502 GQAGDTGYLSAAGARFEVQDCTKQAGHHIHHGILQDGV--IKVGDTLGAEVDANVRGDTV 559

Query: 643 PNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIK 702
            NH+ TH+L+ ALR++LG+HV QKGS+V  E+LRFDFSH + V P  L  IE +VNEQ++
Sbjct: 560 LNHSATHLLHAALRKLLGEHVTQKGSLVTAERLRFDFSHNEAVKPAELAAIEQMVNEQVR 619

Query: 703 AELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAE 762
              +V +    + +AK   G  A+FGE Y D VRV+++G                  S E
Sbjct: 620 NNSEVHTDVCDMEQAKA-KGAMALFGEKYGDEVRVLSMGD---------------GFSVE 663

Query: 763 LCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIE 822
           LCGGTH+  T +   F ++SE GIA G+RRI AVT   A  + E        V    K  
Sbjct: 664 LCGGTHVKRTGDIGLFRIVSEAGIASGVRRIEAVTGARALASVEEQSQTLGNVAALLKTS 723

Query: 823 GSLLEKN--QVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEV----GLDAA 876
              L+    Q+  + K + +E      K+A+  +    S  +     +V      G+D  
Sbjct: 724 PEQLQDKTEQLVASHKALEKELAGLKAKLASMASGDLVSQARDVAGVKVLAVKLDGVDPK 783

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
           ++R++  ++  + G  V++ +T E   K  + A V +  D + +L+  + +  A + + G
Sbjct: 784 SLRDSADQLKNKLGSAVVLLATAE-DGKVSLVASVTK--DLTARLKAGDLMRHAAEMVGG 840

Query: 937 RCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           + G G+  +A G GTD   +  A++ A  +   +L
Sbjct: 841 KGG-GRPDMAQGGGTDVGALPGALESAYSWVESQL 874


>gi|29349403|ref|NP_812906.1| alanyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|41018213|sp|Q8A0M6.1|SYA_BACTN RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|29341312|gb|AAO79100.1| alanyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
          Length = 872

 Score =  588 bits (1516), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 326/747 (43%), Positives = 444/747 (59%), Gaps = 61/747 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++RD+F  FFE K H    S+P+V  +DPTL+F NAGMNQ+K I LG        +K 
Sbjct: 4   AKEIRDSFKNFFESKGHHIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGN-----HPAKY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWE L +V 
Sbjct: 59  HRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAINWAWEYLVEVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +L  + LYAT F G  + GL+ D+EA   W ++LP   ++     DNFWEMGDTGPCGPC
Sbjct: 119 KLNPEHLYATVFEGSPEEGLSRDDEAASYWEQYLPKDHIINGNKHDNFWEMGDTGPCGPC 178

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + A      LVN+D P  IEIWN+VF+Q+NR++DGSL+PLPAK +DTG+
Sbjct: 179 SEIHIDLRPAEERAKISGRDLVNHDHPQVIEIWNLVFMQYNRKADGSLEPLPAKVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF P+  AI   +G      + G D   + D+A RV+ADHI
Sbjct: 239 GFERLCMALQGKTSNYDTDVFQPMLKAIAAMSGT-----EYGKD--KQQDIAMRVIADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++F+I DG  P N    YV+RRILRRAVRYG   L  +  F   L+ +++  MGD +P
Sbjct: 292 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQSFMYKLLPVLIDNMGDAYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ--GKV-LSGQDAFILWDTYGF 471
           EL  ++  I ++I  EE +F +TL  GI    K   D +  GK  +SG+DAF L+DT+GF
Sbjct: 352 ELIAQKGLIEKVIKEEEEAFLRTLETGIRLLDKTMGDTKAAGKTEISGKDAFTLYDTFGF 411

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E G+ V+IE FN  M + ++R+R+A   + G  + +    T  +   G  
Sbjct: 412 PLDLTELILRENGMTVNIEEFNAEMQQQKQRARNAAAIETGDWVTLREGTTEFV---GYD 468

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            T+     + ++  K   + +Y                IVL  + FYAE GGQ+ D G +
Sbjct: 469 YTEYEASILRYRQIKQKNQTLYQ---------------IVLDCTPFYAESGGQVGDTGVL 513

Query: 592 EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHML 651
              F +  V + +      IHI   T+          + C VD D+R   A NH+ TH+L
Sbjct: 514 VSEFETIEVIDTKKENNLPIHI---TKKLPEHPEAPMMAC-VDTDKRAACAANHSATHLL 569

Query: 652 NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS-K 710
           + ALREVLG+H++QKGS+V P+ LRFDFSH + V  E +R++E +VN +I+A + +   +
Sbjct: 570 DSALREVLGEHIEQKGSLVTPDSLRFDFSHFQKVTDEEIRQVEHLVNAKIRANIPLKEYR 629

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
              + EAK + G  A+FGE Y + VRV+  G                  S E CGG H++
Sbjct: 630 NIPIEEAKEL-GAIALFGEKYGERVRVIQFGS-----------------SIEFCGGIHVA 671

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVT 797
            T       ++SE  +A G+RRI A T
Sbjct: 672 ATGNIGMVKIISESSVAAGVRRIEAYT 698


>gi|409427876|ref|ZP_11262363.1| alanyl-tRNA ligase [Pseudomonas sp. HYS]
          Length = 872

 Score =  588 bits (1516), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 360/932 (38%), Positives = 526/932 (56%), Gaps = 92/932 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F +FFE++ H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLRFFEEQGHTRVASSSLIPGNDPTLLFTNAGMNQFKDCFLGQ-----EKRAY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           TRA ++QKC+RAGGK++DL++VG    HHTFFEMLGN+SFGDYFK +AI +AW  LTKV 
Sbjct: 58  TRATSSQKCVRAGGKNSDLENVGYTARHHTFFEMLGNFSFGDYFKRDAITYAWTFLTKVL 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFWEM 230
            LP ++L+ T +        A D+EA DIW K +  PA R++  G         DNFW M
Sbjct: 118 NLPEEKLWVTVY--------ASDDEAYDIWTKEIGVPAERMVRIGDNKGAPYASDNFWTM 169

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG L PLPA 
Sbjct: 170 GDTGPCGPCTEIFYDHGADIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLPAP 229

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+++++Q+  SNY+ D+F  +  A   A G            A++   + +
Sbjct: 230 SVDTGMGLERISAVMQHVHSNYEIDLFRNLLSASAAAIGC-----------ANQEQSSLK 278

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           VV+DHIR+ SF IADG  P NEGR YVLRRI+RRA R+G++ L A   FF  +V  +V  
Sbjct: 279 VVSDHIRSCSFLIADGVLPSNEGRGYVLRRIIRRACRHGNK-LGATGSFFYKIVAALVAE 337

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG+ FPEL Q++A+I  ++ AEE  F KTL +G++  ++   +++G V+ G   F L+DT
Sbjct: 338 MGEAFPELTQQQANIERVLKAEEEQFAKTLEQGLKILEQDLAELKGTVVPGDVVFKLYDT 397

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +A ER L +D  GF   M+  RER+RSA              +   L   
Sbjct: 398 YGFPMDLTADIARERELTIDEAGFEREMEAQRERARSA--------------SAFGLDYN 443

Query: 529 GVLATDDSFKFIWFQ--DHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
            ++  D + +F  +   +  + I A+Y   + +E +  G E  ++L  + FYAE GGQ+ 
Sbjct: 444 TLVKVDVATEFTGYSATEGSANIVALYKDGKVVEQLGEGEEGVVILDRTPFYAESGGQVG 503

Query: 587 DEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
           D G+++     F VR+    GG  +H G +   +G  +VG +V  +VD D +   + NH+
Sbjct: 504 DTGYLQAGNVRFDVRDTTKTGGAFLHHGVVA--SGTLTVGAQVQTRVDADVQHATSLNHS 561

Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD 706
            TH+L+ ALR+VLGDHV QKGS+V  ++LRFDFSH + V PE L+ +E IVN +++   +
Sbjct: 562 ATHLLHAALRQVLGDHVQQKGSLVDSQRLRFDFSHFEAVKPEQLKALEDIVNREVRKNSE 621

Query: 707 VFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGG 766
           V ++E  +  AK   G  A+FGE Y D VRV+++G                  S ELCGG
Sbjct: 622 VQTEETDIETAKQ-KGAMALFGEKYGDSVRVLSMGG---------------DFSVELCGG 665

Query: 767 THLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK-IEGSL 825
            H   T +     ++SE G+A G+RRI AVT      A     + E+++ +A++ ++GS 
Sbjct: 666 IHAKRTGDIGLLKIISEGGVASGVRRIEAVT---GAAALAYLNAAEEQLKEAAQLVKGS- 721

Query: 826 LEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEV-GLDAAAVR----- 879
             ++ +      V E N Q   ++    A+AA++ G     + VEV G+   A R     
Sbjct: 722 --RDNLIDKLSAVLERNRQLEKQLEQLQAKAASAAGDDLSNAAVEVKGVKVLAARLDGQD 779

Query: 880 -EAVLKVIEQ----KGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPL 934
            +A+L +++Q     G  V++  +     K V+ AGV +  D + QL+  + L       
Sbjct: 780 GKALLALVDQLKNKLGRAVILLGSVH-EEKVVLVAGVTK--DLTGQLKAGD-LMKQAAAA 835

Query: 935 KGRCGKGKGGLASGQGTDAAQVTPAMDLAAEF 966
            G  G G+  +A G G D A +  A+ L   F
Sbjct: 836 VGGKGGGRPDMAQGGGVDTAALDNALALTVPF 867


>gi|320539040|ref|ZP_08038714.1| alanyl-tRNA synthetase [Serratia symbiotica str. Tucson]
 gi|320030880|gb|EFW12885.1| alanyl-tRNA synthetase [Serratia symbiotica str. Tucson]
          Length = 875

 Score =  588 bits (1516), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 353/932 (37%), Positives = 529/932 (56%), Gaps = 85/932 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSK--L 119
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG       L K   
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLG-------LDKRAY 59

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           +RA  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK+EAI +AWELLT   
Sbjct: 60  SRATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHEAISYAWELLTGED 119

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFW 228
            + LP ++L+ T +          D+EA DIW K +  PA R++  G         DNFW
Sbjct: 120 WFNLPKEKLWVTIY--------ETDDEAFDIWQKHIGVPAERIIRIGYNKGAAFASDNFW 171

Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
           +MGDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR+SDG++ PLP
Sbjct: 172 QMGDTGPCGPCTEIFYDHGDHIWGGPPGSAEEDGDRYIEIWNIVFMQFNRQSDGAMLPLP 231

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
              VDTG+G ER+ ++LQ+  +NY+ D+F  +   + + TGA     K           +
Sbjct: 232 KPSVDTGMGLERIAAVLQHVNANYEIDLFRTLISVVAKVTGATDLDNK-----------S 280

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            RV+ADHIR  +F ++DG  P NE R YVLRRI+RRA+R+G+ +L A+D FF  LV  ++
Sbjct: 281 LRVIADHIRACAFLVSDGVSPSNESRGYVLRRIIRRAIRHGN-MLGAKDTFFYKLVVPLI 339

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
           +VMG    ELK++++ + +++  EE  F +TL +G+         +QG+ L G+ AF L+
Sbjct: 340 EVMGSAADELKRQQSRVEQVLKTEEEQFARTLERGLALLDDELNKLQGETLDGEIAFRLY 399

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DT+GFP+DLT  +  ERGL VD  GF  AM+  R R+R +    A    ++  D ++   
Sbjct: 400 DTFGFPVDLTADVCRERGLKVDEAGFQQAMEAQRRRARESSGFCADYNTMIRVDGSS--- 456

Query: 527 KRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
                     F    +++ ++++ A++   + +E +  G E  +VL  + FY E GGQ+ 
Sbjct: 457 ---------RFSGYDYEEQQAMVIALFRDGQPVEQINAGEEAVVVLDGTPFYGESGGQVG 507

Query: 587 DEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
           D+G ++     F V + Q YG    H+G L++G+    V + V  ++D +RR  I  NH+
Sbjct: 508 DKGVLKAARADFVVSDTQKYGQATGHLGKLSQGS--LKVKDRVDAQIDTERRNRIRLNHS 565

Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD 706
            TH+L+ ALR+ LG+HV QKGS+V  + LRFDFSH + + PE +RR+E +VN+Q++  L 
Sbjct: 566 ATHLLHAALRQTLGEHVAQKGSLVNDKYLRFDFSHYEAMKPEQIRRVEDLVNQQVRRNLL 625

Query: 707 VFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGG 766
           V ++  +L +AK   G  A+FGE Y D VRV+ +G                  S ELCGG
Sbjct: 626 VQTEVMSLDDAKE-KGAMALFGEKYDDNVRVLTMG----------------DFSTELCGG 668

Query: 767 THLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGS-L 825
           TH S T +   F++++E G A G+RRI AVT   A         L + V    K + S L
Sbjct: 669 THTSRTGDIGLFSIVTESGTAAGVRRIEAVTGEGAIAKLHQQSDLLQVVAHLVKGDSSNL 728

Query: 826 LEKNQVRKAQKKVAEENLQK------AVKVATETAEAAASNGKPFCISRVEVGLDAAAVR 879
            +K      + ++ E+ LQ+      A + A+ +++A   NG    +S+++  ++A  +R
Sbjct: 729 ADKLHATLDRTRLLEKELQQLKDQQAAQESASLSSQAKVVNGVKLLVSQLD-NVEAKMLR 787

Query: 880 EAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCG 939
             V  +  Q G  ++V +T    +K  + AGV +  D + +++  E +    Q + G+ G
Sbjct: 788 IMVDDLKNQLGSAIIVLAT-TADDKVSLIAGVTK--DLTDRVKAGELIGNVAQQVAGKGG 844

Query: 940 KGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
            G+  +A   GTD + +  A++    + A KL
Sbjct: 845 -GRPDMAQAGGTDVSALPAALNSVEAWVASKL 875


>gi|307261112|ref|ZP_07542790.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12
           str. 1096]
 gi|306869194|gb|EFN00993.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12
           str. 1096]
          Length = 874

 Score =  588 bits (1515), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 361/939 (38%), Positives = 514/939 (54%), Gaps = 97/939 (10%)

Query: 61  TKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLT 120
           +++R +F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG      +    T
Sbjct: 5   SEIRQSFLDFFHSKGHTVVPSSSLVPENDPTLLFTNAGMNQFKDVFLGL-----EKRPYT 59

Query: 121 RACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KV 178
           RA   Q+C+RAGGKHNDL++VG    HHTFFEM+GN+SFGDYFK++AI++ WE LT  + 
Sbjct: 60  RATTAQRCVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKHDAIQFGWEYLTSPQW 119

Query: 179 YRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFWE 229
             LP ++LY T +          D+EA DIW K +  P   ++  G         DNFW 
Sbjct: 120 LGLPKEKLYVTVY--------ETDDEAYDIWNKIVGVPTDHIIRIGDNKGAPYASDNFWA 171

Query: 230 MGDTGPCGPCSEIHYDRTGNRDAASLVNN---DDPTCIEIWNIVFIQFNRESDGSLKPLP 286
           MGDTGPCGPC+EI YD  G      L  +   D    IE+WNIVF+QFNR +DG+++ LP
Sbjct: 172 MGDTGPCGPCTEIFYDH-GETFWGGLPGSPEEDGDRYIEVWNIVFMQFNRLADGTMEKLP 230

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
              VDTG+G ER+T+++Q+  SNY+TD+F  +   +         +G +   D D  + +
Sbjct: 231 KPSVDTGMGLERMTAVMQHVNSNYETDIFQTLIKEV---------AGLLNVSDLD--NKS 279

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            RVVADHIR  S+ IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  + 
Sbjct: 280 LRVVADHIRACSYLIADGVVPSNESRGYVLRRIIRRAVRHGN-LLGAKEAFFYKLVPTLA 338

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
            VMG     L Q++AHI++ + AEE  F +TL +G+   + A   V+   LSG+ AF L+
Sbjct: 339 TVMGHAGEVLTQKQAHIQKTLKAEEEQFARTLERGLALLEDALTKVENNTLSGEVAFKLY 398

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFPLDLT  +  ER L +D  GF   M   RER++++ N                  
Sbjct: 399 DTYGFPLDLTADVCRERELTIDEAGFEAEMTAQRERAKASSN--------------FGTD 444

Query: 527 KRGVLATDDSFKFIWFQD--HKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
              V+  +    FI + +   ++ I  +++  + ++++  G    I+L  + FYAE GGQ
Sbjct: 445 YNNVIKVEGQTDFIGYDNLEAQATIVGLFSNGKAVDTIQSGESAVIILDQTPFYAEMGGQ 504

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           + D G I     +F V + Q YG    HIG LT G+   S+G++V   VD  RR  I  N
Sbjct: 505 VGDSGLISTEICNFAVNDTQKYGQVFGHIGQLTSGS--LSIGDKVTATVDATRRVAITAN 562

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ ALREVLGDHV QKGS+V    LRFDFS  + +    L  IE IVN +I+  
Sbjct: 563 HSATHLLHSALREVLGDHVAQKGSLVSENILRFDFSQPEAISKSQLEEIERIVNRKIREN 622

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
           + V  +   +  AK   G  A+FGE Y D VRVV +                   S ELC
Sbjct: 623 IQVTIETMDIESAKK-KGAMALFGEKYGDVVRVVGM----------------TEFSIELC 665

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKI--- 821
           GGTH+  T +   F L+SE  +A GIRR+ AVT   A  A E   + +K +  +++    
Sbjct: 666 GGTHVQRTGDIGLFKLVSEGAVAAGIRRVEAVT---AETAIEWLHNQQKVLQQSAEFLKA 722

Query: 822 -EGSLLEKNQVRKAQKKVAEENLQK-----AVKVATETAEAAAS-NGKPFCISRVEVGLD 874
              SL+EK Q  + + K  E+ LQ+     A +  +E  + A   NG    + ++E  ++
Sbjct: 723 DSNSLVEKIQQLQDKAKRTEKELQQLKDKLAAQAGSELVKQANKINGVNVVVQKLE-NVE 781

Query: 875 AAAVREAVLKVIEQKGMPVMVFST--DETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQ 932
             ++R  V  +  Q    ++VF T  DE  N   +  GV +  D S ++   E + A  Q
Sbjct: 782 VKSLRTMVDDLKNQLESAIVVFGTVADEKVN---LIVGVTK--DLSSKVNAGELVGAMAQ 836

Query: 933 PLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
            + G+ G G+  +A   G++   +  A+  A E+   KL
Sbjct: 837 QVGGKGG-GRADMAMAGGSEPQNLDNALKFAEEWIQAKL 874


>gi|398842095|ref|ZP_10599294.1| alanine--tRNA ligase [Pseudomonas sp. GM102]
 gi|398106554|gb|EJL96581.1| alanine--tRNA ligase [Pseudomonas sp. GM102]
          Length = 873

 Score =  588 bits (1515), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 356/893 (39%), Positives = 505/893 (56%), Gaps = 90/893 (10%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F +FFE++ H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLRFFEEQGHTRVASSSLIPGNDPTLLFTNAGMNQFKDCFLGQ-----EKRAY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           TRA ++QKC+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AW  LT  K
Sbjct: 58  TRAVSSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAITYAWNFLTSEK 117

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFW 228
              LP ++L+ T +        A D+EA DIW K +  PA R++  G         DNFW
Sbjct: 118 WLNLPKEKLWVTVY--------ASDDEAYDIWTKDIGVPAERMVRIGDNKGAPYASDNFW 169

Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
            MGDTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG L PLP
Sbjct: 170 TMGDTGPCGPCTEIFYDHGADIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLP 229

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
           A  VDTG+G ER++++LQ+  SNY+ D+F  +  A  +A G             +    +
Sbjct: 230 APSVDTGMGLERISAVLQHVHSNYEIDLFQSLLIASAKAIGC-----------TNDAQAS 278

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            +VVADHIR+  F IADG  P NEGR YVLRRI+RRA R+G++ L A+  FF  +V  +V
Sbjct: 279 LKVVADHIRSCGFLIADGVLPSNEGRGYVLRRIIRRACRHGNK-LGAKGSFFYQIVAALV 337

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
             MG+ FPELK ++AHI  ++ AEE  F KTL +G++  ++   +++G V+ G   F L+
Sbjct: 338 AEMGEAFPELKSQQAHIERVLKAEEEQFAKTLEQGLKILEQDLAELKGDVVPGDVVFKLY 397

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFP+DLT  +A ER L +D EGF   M+  R R+RSA       +  MD ++     
Sbjct: 398 DTYGFPMDLTGDIARERSLTIDEEGFEREMEAQRVRARSAS------SFGMDYNS----- 446

Query: 527 KRGVLATDDSFKFIWFQDHKSVIK--AIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
              ++  D + +F  +  H    K  A+Y   + ++++  G E  +VL  + FYAE GGQ
Sbjct: 447 ---LVKVDVATEFTGYTAHSGSAKIVALYKDGQSVDALSEGEEGVVVLNQTPFYAESGGQ 503

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           I D GF++     F VR+    GG  +H G L  G+    VG  V   VD D R   + N
Sbjct: 504 IGDCGFLQAGAARFDVRDTTKTGGAFLHHGVLDSGS--LIVGAPVETHVDADVRHATSLN 561

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ ALR+VLG+HV QKGS+V  ++LRFDFSH + + PE L+ +E IVN +I+  
Sbjct: 562 HSATHLLHAALRQVLGEHVQQKGSLVDSQRLRFDFSHFEAIKPEQLKALEDIVNAEIRKN 621

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
            +V ++E  +  AK   G  A+FGE Y D VRV+++G                  S ELC
Sbjct: 622 SEVETEETDIETAKQ-KGAMALFGEKYGDSVRVLSMG----------------DFSVELC 664

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAF--------EAACSLEKEVD 816
           GG H + T +     ++SE G+A G+RRI AVT   A            EAA  ++   D
Sbjct: 665 GGIHATRTGDIGLLKIISEGGVASGVRRIEAVTGAAALAYLNAAEEQLKEAANLVKGSRD 724

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQ-KAVKVATETAEAAASNGKPFCISRVEV-GLD 874
           +      ++LE+N++ + Q     E LQ KA   A +   A+A + K   +  V + G D
Sbjct: 725 NLIDKLSAVLERNRLLEKQL----EQLQAKAASAAGDDLSASALDVKGVKVLAVRLDGQD 780

Query: 875 AAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWL 927
             A+   V ++  + G  V++  +     K V+ AGV +  D + QL+  + +
Sbjct: 781 GKALLALVDQLKNKLGRAVILLGSVH-EEKVVLVAGVTK--DLTGQLKAGDLM 830


>gi|148546681|ref|YP_001266783.1| alanyl-tRNA synthetase [Pseudomonas putida F1]
 gi|148510739|gb|ABQ77599.1| alanyl-tRNA synthetase [Pseudomonas putida F1]
          Length = 897

 Score =  588 bits (1515), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 356/917 (38%), Positives = 514/917 (56%), Gaps = 95/917 (10%)

Query: 40  FSASAVAAMPGADPQVVEWP--ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANA 97
           F+  +   +P      VE P  + ++R+ F +FFE++ H    SS ++P NDPTLLF NA
Sbjct: 4   FAVVSSTRLPNRAAVSVEEPMKSAEIREAFLRFFEEQGHTRVASSSLIPNNDPTLLFTNA 63

Query: 98  GMNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNW 157
           GMNQ+K  FLG      +    TRA ++QKC+RAGGKHNDL++VG    HHTFFEMLGN+
Sbjct: 64  GMNQFKDCFLGA-----EKRAYTRAVSSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNF 118

Query: 158 SFGDYFKNEAIEWAWELLT--KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FL 213
           SFGDYFK +AI +AW  LT  +   LP ++L+ T +        A D+EA DIW K   +
Sbjct: 119 SFGDYFKRDAITFAWTFLTSEQWLNLPKEKLWVTVY--------ATDDEAYDIWTKEVGV 170

Query: 214 PASRVLPFG-------CKDNFWEMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCI 264
           PA R++  G         DNFW MGDTGPCGPC+EI YD   +           D    I
Sbjct: 171 PAERMVRIGDNKGAPYASDNFWTMGDTGPCGPCTEIFYDHGPDIWGGPPGSPEEDGDRYI 230

Query: 265 EIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQ 324
           EIWN VF+QFNR +DG L PLPA  VDTG+G ER++++LQ+  SNY+ D+F  +  A  +
Sbjct: 231 EIWNNVFMQFNRTADGVLHPLPAPSVDTGMGLERVSAVLQHVHSNYEIDLFQNLLAAAAK 290

Query: 325 ATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAV 384
           A G            ++    + +VVADHIR+  F IADG  P NEGR YVLRRI+RRA 
Sbjct: 291 AIGC-----------SNDGQASLKVVADHIRSCGFLIADGVLPSNEGRGYVLRRIIRRAC 339

Query: 385 RYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEK 444
           R+G++ L A+  FF  +V  +   MG+ FPELK ++AHI  ++ AEE  F KTL +G+  
Sbjct: 340 RHGNK-LGAKGSFFYQIVAALAAEMGEAFPELKSQQAHIERVLKAEEEQFAKTLEQGLRI 398

Query: 445 FKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSR 504
            ++    ++G V+ G   F L+DTYGFP+DLT  +A ER L +D  GF   MD  RER+R
Sbjct: 399 LEQDLAQLKGDVVPGDVVFKLYDTYGFPMDLTADIARERELTIDEAGFEREMDAQRERAR 458

Query: 505 SAQNKQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQ--DHKSVIKAIYTGSEFIESV 562
           SA       A  MD ++        ++  D + +F+ +   + +  I A+Y   + ++ +
Sbjct: 459 SAS------AFGMDYNS--------LVKVDSATEFLGYDTTEGQGKIIALYKDGQSVDQL 504

Query: 563 VPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGR 622
             G +  +VL  + FYAE GGQ+ D GF++     F VR+    GG  +H G +  GA  
Sbjct: 505 GEGEQGVVVLDRTPFYAESGGQVGDSGFLQAGAARFDVRDTTKTGGAFLHHGVVASGA-- 562

Query: 623 FSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHG 682
             +G  V  KVD D +   + NH+ TH+L+ ALR+VLG+HV QKGS+V  ++LRFDFSH 
Sbjct: 563 LLIGSPVEAKVDADVQHATSLNHSATHLLHEALRQVLGEHVQQKGSLVDSQRLRFDFSHF 622

Query: 683 KPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGR 742
           + V PE ++++E IVN +I+    V ++   +  AK   G  A+FGE Y D VRV+++G 
Sbjct: 623 EAVKPEQIKQLEDIVNREIRKNTPVETELTDIETAKA-KGAMALFGEKYGDTVRVLSMGG 681

Query: 743 KVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAY 802
                            S ELCGG H   T +   F ++SE G+A G+RRI AVT     
Sbjct: 682 ---------------DFSVELCGGIHAKRTGDISLFKIISEGGVASGVRRIEAVT---GA 723

Query: 803 KAFEAACSLEKEVDDASK-IEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNG 861
            A     + E++V +A++ ++G+   ++ +      V E N Q   ++    A+AA++ G
Sbjct: 724 AALAYLNAAEEQVKEAAQLVKGN---RDNLIDKLSAVLERNRQLEKQLEQLQAKAASAAG 780

Query: 862 KPFCISRVEV-----------GLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAG 910
                + VEV           G D  A+   V ++  + G  V++  + E   K V+ AG
Sbjct: 781 DDLSNAAVEVKGAKVLAARLDGQDGKALLALVDQLKNKLGHAVILLGS-EHEGKVVLVAG 839

Query: 911 VPEKSDQSKQLEVSEWL 927
           V +  D S QL+  + +
Sbjct: 840 VTK--DLSSQLKAGDLM 854


>gi|305666370|ref|YP_003862657.1| alanyl-tRNA synthetase [Maribacter sp. HTCC2170]
 gi|88708362|gb|EAR00599.1| alanyl-tRNA synthetase [Maribacter sp. HTCC2170]
          Length = 871

 Score =  588 bits (1515), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 347/863 (40%), Positives = 490/863 (56%), Gaps = 66/863 (7%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R  F  FFE K H    S+P+V  +DPTL+F NAGMNQ+K  FLG +     ++K 
Sbjct: 3   SKEIRAQFLDFFETKKHKIVPSAPMVIKDDPTLMFTNAGMNQFKEFFLGNS-----VAKS 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  +TQKC+R  GKHNDL++VGKDTYHHT FEMLGNWSFGDYFK EAIEWAWELLT   
Sbjct: 58  PRMADTQKCLRVSGKHNDLEEVGKDTYHHTMFEMLGNWSFGDYFKKEAIEWAWELLTDKL 117

Query: 180 RLPADRLYATYFGGDEKA-GLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGP 238
           ++  D LY + F G + +  L  DNEA ++W   +P  R++    KDNFWEMGD GPCGP
Sbjct: 118 QIDKDSLYVSVFEGSKDSDNLEMDNEAYELWSGIVPKDRIIMGNKKDNFWEMGDQGPCGP 177

Query: 239 CSEIHYD-----RTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTG 293
           CSEIH D            A LVN D P  +EIWN+VF+Q+NR++DG+L+PLP KHVDTG
Sbjct: 178 CSEIHVDIRPAEEKAETSGAFLVNQDHPLVVEIWNLVFMQYNRKADGALEPLPEKHVDTG 237

Query: 294 LGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADH 353
           +GFERL  +LQ   SNYDTDVF PI   I+  T A    GK      +++D+A RV+ADH
Sbjct: 238 MGFERLCMVLQGVQSNYDTDVFTPIIREIETITNAD--YGK-----NEEIDIAIRVIADH 290

Query: 354 IRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVF 413
           IR ++F+IADG  P N G  YV+RRILRRA+RYG   L  ++ F   LVN++ + MG+ F
Sbjct: 291 IRAVAFSIADGQLPSNTGAGYVIRRILRRAIRYGFTFLNTKEPFMYRLVNVLTETMGNAF 350

Query: 414 PELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPL 473
           PELK +   I  ++  EE SF  TL +G+          +GKV+ G+ AF L+DTYGFP+
Sbjct: 351 PELKDQRQLIENVVKEEENSFLNTLEQGLVLLDNLVSKAKGKVVQGRKAFELYDTYGFPI 410

Query: 474 DLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLAT 533
           DLT L+ EE+G  +D +GF+ AM E ++RSRSA              +  A     VL+ 
Sbjct: 411 DLTALILEEKGYTLDEKGFHEAMKEQKDRSRSA--------------SEIAKEDWMVLSD 456

Query: 534 DDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEG 593
           D   +F+ +   ++ +K +      + S   G +  +V   + FY E GGQ+ D+G++E 
Sbjct: 457 DSEQEFVGYDLLETNVKLVKYRK--VTSKKEGEQYQMVFNLTPFYPEGGGQVGDKGYLEA 514

Query: 594 LFGS-FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLN 652
             G   Y+ + +     ++H           S  +     VD  +R+  A NHT TH+L+
Sbjct: 515 PNGDVVYILDTKKENNEIVHFAKNLPK----STSDTFKAVVDKKQRQRTAANHTATHLLH 570

Query: 653 FALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEA 712
            ALREVLG+HV+QKGS V  + LRFDFSH   +  E LR +E+ VN +I+ +L +    +
Sbjct: 571 QALREVLGNHVEQKGSAVHSKYLRFDFSHFSKMTVEELREVENFVNARIEGQLPLDENRS 630

Query: 713 TLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNT 772
              E     G  A+FGE Y + VR +  G+                 S ELCGG H+  T
Sbjct: 631 VPMEEALKGGAMALFGEEYGETVRTIRFGQ-----------------SMELCGGAHVKIT 673

Query: 773 REAEAFALLSEEGIAKGIRRITAVTTGLAYKAF-----EAACSLEKEVDDASK-IEGSLL 826
            +   F + SE  +A GIRRI A+T   A K F      +   ++  +++A   +     
Sbjct: 674 SDIWHFKIKSEGAVAAGIRRIEAITYD-AVKDFYFHNNRSLFEIKDLLNNAQNPVNAVKA 732

Query: 827 EKNQVRKAQKKVAEENLQKAVKVATE-TAEAAASNGKPFCISRVEVGLDAAAVREAVLKV 885
            +++  K +K+V +    KA  +  +  AE    NG  F   +V+  LDAA +++   ++
Sbjct: 733 LQDENAKLKKEVEQLLKDKAKNLKGDLLAELKEVNGIQFLAKKVD--LDAAGIKDLSFEM 790

Query: 886 IEQKGMPVMVFSTDETTNKAVVC 908
              K    ++F T++     + C
Sbjct: 791 GNNKNNLFLLFGTEQNGKALLSC 813


>gi|254786776|ref|YP_003074205.1| alanine--tRNA ligase [Teredinibacter turnerae T7901]
 gi|237686567|gb|ACR13831.1| alanine--tRNA ligase [Teredinibacter turnerae T7901]
          Length = 866

 Score =  588 bits (1515), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 360/912 (39%), Positives = 512/912 (56%), Gaps = 72/912 (7%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++RD F K+F ++ H    SS +VP NDPTLLF NAGM Q+K +FLG      +    
Sbjct: 4   SAEIRDAFLKYFAEQGHEVVNSSSLVPGNDPTLLFTNAGMVQFKDVFLGA-----EKRPY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA ++Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI + WE LTKV 
Sbjct: 59  SRATSSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIRFGWEFLTKVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCKDNFWEMGDTGPCG 237
            LPA+RL+ T            D+EA DIWLK   + A R      +DNFW+MGDTGPCG
Sbjct: 119 GLPAERLWVTVH--------ISDDEAADIWLKEVGVSADRFSRLD-EDNFWQMGDTGPCG 169

Query: 238 PCSEIHYDRTGNRDAA--SLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           P SEI YD   +         N+D    IEIWN+VF+QF R+S+G L PLP   VDTG+G
Sbjct: 170 PSSEIFYDHGADVPGGPPGSENDDLDRYIEIWNLVFMQFERQSNGELVPLPRPSVDTGMG 229

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
            ER+ +++Q   SNY+ D+F  +  A   ATG            +D  + + RV+ADHIR
Sbjct: 230 LERIAAVMQGVHSNYEIDLFQALLRAAATATGT-----------SDLENKSLRVIADHIR 278

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPE 415
           + SF + DG  P NEGR YVLRRI+RRA+R+G + L   + FF+ LV  +V+ MGD +PE
Sbjct: 279 SCSFLVCDGVLPSNEGRGYVLRRIMRRAIRHGHK-LGQTNSFFHTLVAALVEQMGDAYPE 337

Query: 416 LKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDL 475
           L+Q +A I +++  EE  F KTL KG+   + +   + G V+ G+  F L+DTYGFP+DL
Sbjct: 338 LRQHQAQIEKVLLTEEQQFAKTLDKGMAILEDSLAGLDGSVIPGETVFTLYDTYGFPVDL 397

Query: 476 TQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDD 535
           T  +A ER L +D++G+ + M+  + R+R      A G+  MD  A  +L       T +
Sbjct: 398 TNDIARERSLTLDLDGYESLMEAQKARAR------ASGSFKMDYTANLSLE-----GTTE 446

Query: 536 SFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLF 595
              +   ++   V +A++   E +  +  G+E  IVL+ + FY E GGQ  D G+I  + 
Sbjct: 447 FLGYTHLEESGKV-QALFKDGEKVSQLNEGDEGVIVLSRTPFYGESGGQAGDTGYISTVA 505

Query: 596 GSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFAL 655
           G F VR+ Q  G   +HIG +  G+   +   EV   VD   R   A NH+ TH+L+ AL
Sbjct: 506 GKFEVRDCQKSGSNHLHIGVMLSGS--IAEQNEVTACVDQSVRAATALNHSATHLLHAAL 563

Query: 656 REVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLA 715
           R+VLGDHV QKGS+V  ++LRFDFSH + V P  L++IE IVN +I+    V ++   + 
Sbjct: 564 RKVLGDHVTQKGSLVDSQRLRFDFSHFEAVKPAELKQIERIVNGEIRRNTVVTTELCDMD 623

Query: 716 EAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREA 775
            AK   G   +FGE Y D VRV+++G                  S ELCGGTH+S T + 
Sbjct: 624 TAKE-RGAMMLFGEKYGDEVRVLSMGE---------------GFSVELCGGTHVSRTGDI 667

Query: 776 EAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEG-SLLEKNQVRKA 834
               ++SE GIA G+RRI AVT   A  A E+   L   V  A K    SL EK +   A
Sbjct: 668 GLMRIISEGGIASGVRRIEAVTGEHALVAVESQAELLSTVAGALKSGAESLPEKLEQLLA 727

Query: 835 QKKVAEENLQKAVKVATET------AEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQ 888
           + K+ E+ L  A              EA    G    +  +E G+DA ++   + ++  +
Sbjct: 728 RNKMLEKELAAANSKLAAASADEWLGEAQEIEGLKLLVKSLE-GVDAKSLLSTLDQLKNK 786

Query: 889 KGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASG 948
            G   ++ ++     K  + AGV   +D +K+L   + L      + G+ G G+  +A G
Sbjct: 787 LGSCAIILAS-VNEGKIALAAGV--SADSTKRLRAGDLLKYVATQVGGK-GGGRPDMAQG 842

Query: 949 QGTDAAQVTPAM 960
            G+D A +  A+
Sbjct: 843 AGSDVAALPGAL 854


>gi|298384931|ref|ZP_06994490.1| alanine--tRNA ligase [Bacteroides sp. 1_1_14]
 gi|298262075|gb|EFI04940.1| alanine--tRNA ligase [Bacteroides sp. 1_1_14]
          Length = 872

 Score =  588 bits (1515), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 326/747 (43%), Positives = 443/747 (59%), Gaps = 61/747 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++RD+F  FFE K H    S+P+V  +DPTL+F NAGMNQ+K I LG        +K 
Sbjct: 4   AKEIRDSFKNFFESKGHHIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGN-----HPAKY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWE L +V 
Sbjct: 59  HRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAINWAWEYLVEVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +L  + LYAT F G  + GL+ D+EA   W ++LP   ++     DNFWEMGDTGPCGPC
Sbjct: 119 KLNPEHLYATVFEGSPEEGLSRDDEAASYWEQYLPKDHIINGNKHDNFWEMGDTGPCGPC 178

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + A      LVN+D P  IEIWN+VF+Q+NR++DGSL+PLPAK +DTG+
Sbjct: 179 SEIHIDLRPAEERAKISGRDLVNHDHPQVIEIWNLVFMQYNRKADGSLEPLPAKVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF P+  AI   +G      + G D   + D+A RV+ADHI
Sbjct: 239 GFERLCMALQGKTSNYDTDVFQPMLKAIAAMSGT-----EYGKD--KQQDIAMRVIADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++F+I DG  P N    YV+RRILRRAVRYG   L  +  F   L+ +++  MGD +P
Sbjct: 292 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQSFMYKLLPVLIDNMGDAYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ--GKV-LSGQDAFILWDTYGF 471
           EL  ++  I ++I  EE +F +TL  GI    K   D +  GK  +SG+DAF L+DT+GF
Sbjct: 352 ELIAQKGLIEKVIKEEEEAFLRTLETGIRLLDKTMGDTKAAGKTEISGKDAFTLYDTFGF 411

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E G+ V+IE FN  M + ++R+R+A   + G  + +    T  +   G  
Sbjct: 412 PLDLTELILRENGMTVNIEEFNTEMQQQKQRARNAAAIETGDWVTLREGTTEFV---GYD 468

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            T+     + ++  K   + +Y                IVL  + FYAE GGQ+ D G +
Sbjct: 469 YTEYEASILRYRQIKQKNQTLYQ---------------IVLDCTPFYAESGGQVGDTGVL 513

Query: 592 EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHML 651
              F +  V + +      IHI   T+          + C VD D+R   A NH+ TH+L
Sbjct: 514 VSEFETIEVIDTKKENNLPIHI---TKKLPEHPEAPMMAC-VDTDKRAACAANHSATHLL 569

Query: 652 NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS-K 710
           + ALREVLG H++QKGS+V P+ LRFDFSH + V  E +R++E +VN +I+A + +   +
Sbjct: 570 DSALREVLGKHIEQKGSLVTPDSLRFDFSHFQKVTDEEIRQVEHLVNAKIRANIPLKEYR 629

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
              + EAK + G  A+FGE Y + VRV+  G                  S E CGG H++
Sbjct: 630 NIPIEEAKEL-GAIALFGEKYGERVRVIQFGS-----------------SIEFCGGIHVA 671

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVT 797
            T       ++SE  +A G+RRI A T
Sbjct: 672 ATGNIGMVKIISESSVAAGVRRIEAYT 698


>gi|398896540|ref|ZP_10647618.1| alanine--tRNA ligase [Pseudomonas sp. GM55]
 gi|398178304|gb|EJM65956.1| alanine--tRNA ligase [Pseudomonas sp. GM55]
          Length = 873

 Score =  588 bits (1515), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 359/895 (40%), Positives = 502/895 (56%), Gaps = 94/895 (10%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F +FFE++ H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLRFFEEQGHTRVASSSLIPGNDPTLLFTNAGMNQFKDCFLGQ-----EKRAY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           TRA ++QKC+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AW  LT  K
Sbjct: 58  TRAVSSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAISYAWNFLTSDK 117

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFW 228
              LP ++L+ T +        A D+EA DIW K +  PA R++  G         DNFW
Sbjct: 118 WLNLPKEKLWVTVY--------ASDDEAYDIWTKEIGVPAERMVRIGDNKGAPYASDNFW 169

Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
            MGDTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG L PLP
Sbjct: 170 TMGDTGPCGPCTEIFYDHGADIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLP 229

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
           A  VDTG+G ER++++LQ+  SNY+ D+F  +  A  +A G             +    +
Sbjct: 230 APSVDTGMGLERISAVLQHVHSNYEIDLFQSLLSASAKAIGC-----------TNDNQAS 278

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            +VVADHIR+  F IADG  P NEGR YVLRRI+RRA R+G++ L A+  FF  +V  +V
Sbjct: 279 LKVVADHIRSCGFLIADGVLPSNEGRGYVLRRIIRRACRHGNK-LGAKGSFFYQIVAALV 337

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
             MG+ FPELK ++AHI  ++ AEE  F KTL +G++  ++   +++G V+ G   F L+
Sbjct: 338 AEMGEAFPELKSQQAHIERVLKAEEEQFAKTLEQGLKILEQDLAELKGDVVPGDVVFKLY 397

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFP+DLT  +A ER L +D  GF   M+  R R+RSA       +  MD ++     
Sbjct: 398 DTYGFPMDLTGDIARERSLTIDEAGFEREMEAQRVRARSAS------SFGMDYNS----- 446

Query: 527 KRGVLATDDSFKFIWFQDHKSVIK--AIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
              ++  D   +F  +  H    K  A+Y   + ++ +  G E  +VL  + FYAE GGQ
Sbjct: 447 ---LVKVDVDTEFTGYTAHSGSAKIVALYKDGQSVDVLNEGEEGVVVLNQTPFYAESGGQ 503

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           I D GF++     F VR+    GG  +H G L  G+    VG  V   VD + R   + N
Sbjct: 504 IGDCGFLQAGAARFDVRDTTKTGGAFLHHGVLDSGS--LIVGAPVETHVDAEVRHATSLN 561

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ ALR+VLGDHV QKGS+V  ++LRFDFSH + + PE L+ +E IVN +I+  
Sbjct: 562 HSATHLLHAALRQVLGDHVQQKGSLVDSQRLRFDFSHFEAIKPEQLKALEDIVNAEIRKN 621

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
            +V ++E  +  AK   G  A+FGE Y D VRV+++G                  S ELC
Sbjct: 622 SEVETEETDIETAKQ-KGAMALFGEKYGDNVRVLSMG----------------DFSVELC 664

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGS 824
           GG H + T +     ++SE G+A G+RRI AVT   A     AA    KE   AS + GS
Sbjct: 665 GGIHANRTGDIGLLKIISEGGVASGVRRIEAVTGAQALAYLNAAEEQLKEA--ASLVRGS 722

Query: 825 ----------LLEKNQVRKAQKKVAEENLQ-KAVKVATETAEAAASNGKPFCISRVEV-G 872
                     +LE+N++ + Q     E LQ KA   A +   A A + K   +  V + G
Sbjct: 723 RDNLIDKLSAVLERNRLLEKQL----EQLQAKAASAAGDDLSAQALDVKDVKVLAVRLDG 778

Query: 873 LDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWL 927
            D  A+   V ++  + G  V++       +K V+ AGV +  D + QL+  + +
Sbjct: 779 QDGKALLALVDQLKNKLGRAVILLGGVH-EDKVVLVAGVTK--DLTGQLKAGDLM 830


>gi|383817097|ref|ZP_09972480.1| alanyl-tRNA synthetase [Serratia sp. M24T3]
 gi|383294080|gb|EIC82431.1| alanyl-tRNA synthetase [Serratia sp. M24T3]
          Length = 875

 Score =  587 bits (1514), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 352/920 (38%), Positives = 510/920 (55%), Gaps = 86/920 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS ++P NDPTL+F NAGMNQ+K +FLG  + +       R
Sbjct: 7   EIRQAFLDFFHSKGHTVVDSSSLIPTNDPTLMFTNAGMNQFKDVFLGLDNRD-----YNR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI++AWELLT    +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKEDAIKFAWELLTGEHWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFWEM 230
            LP ++L+ T +        A D+EA DIW K +  P  R++  G         DNFW+M
Sbjct: 122 NLPKEKLWVTVY--------ATDDEAYDIWEKQIGVPKERIIRIGDNKGAQYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPCSEI YD   +           D    IEIWN+VF+QFNR++DG++ PLP  
Sbjct: 174 GDTGPCGPCSEIFYDHGDHIWGGPPGSAEEDGDRYIEIWNLVFMQFNRQADGTMLPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+T++LQ+  SNYD D+F  +  A+ Q TGA   + K           + R
Sbjct: 234 SVDTGMGLERITAVLQHVNSNYDIDLFQKLIAAVAQVTGATDLNNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F I+DG  P NEGR YVLRRI+RRAVR+G+ +L A++ FF  LV  +V+V
Sbjct: 283 VIADHIRSCAFLISDGVIPSNEGRGYVLRRIIRRAVRHGN-MLGAKETFFYKLVAPLVEV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    EL ++++ + +++  EE  F +TL +G+    +    ++G  L G   F L+DT
Sbjct: 342 MGSAGIELAKQQSTVEQLLKTEEEQFARTLERGLALLDEELAALKGDTLPGDIVFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           +GFP+DLT  +  ER L +D EGF  AM+  R R+R +            AD  + +   
Sbjct: 402 FGFPVDLTADVCRERNLKIDEEGFEKAMEVQRNRARESSG--------FSADYNSMVRVD 453

Query: 529 GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDE 588
           GV      F        +S + A++   + +  +  G    +VL  + FY E GGQ+ D+
Sbjct: 454 GVT----QFSGYEHVQRQSKVVALFVDGQPVNEIEAGVNAIVVLDDTPFYGESGGQVGDK 509

Query: 589 GFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
           G ++   G F V + Q YG  + H G L+  AG+ ++G+ V   VD  RR  I  NH+ T
Sbjct: 510 GVLKTSAGEFAVGDTQKYGKAIGHQGVLS--AGKLAIGDSVEADVDSARRDRIRLNHSAT 567

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+L+ ALR+ LG HV QKGS+V    LRFDFSH + + PE +R++E +VN QI+  L + 
Sbjct: 568 HLLHAALRQTLGKHVAQKGSLVNDNYLRFDFSHFEAMKPEEIRQVEDLVNAQIRRNLPIE 627

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
           +K   L +AK   G  A+FGE Y D VRV+++G                  S ELCGG H
Sbjct: 628 TKIMALDDAKE-KGAMALFGEKYEDNVRVLSMG----------------DFSTELCGGIH 670

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEG---SL 825
            S T +   F + SE G A G+RRI AVT   A         L ++V  A  ++G   S+
Sbjct: 671 ASRTGDIGLFRIQSESGTAAGVRRIEAVTGENAINTLHQQSDLLQDV--AHLVKGDVNSV 728

Query: 826 LEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEV------GLDAAAVR 879
            +K +    + ++ E+ LQ+ VK      E+A+ +G+   +  V++      G++A  +R
Sbjct: 729 TDKIRSLMERSRLLEKELQQ-VKDQQAAQESASLSGQTKEVKGVKLLVKQLDGVEAKMLR 787

Query: 880 EAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCG 939
             V  +  Q G  ++V +T      +++     + +D+ K  E    L   +    G  G
Sbjct: 788 TMVDDLKNQLGSAIIVLATAAEGKVSLIVGVTKDLTDRVKAGE----LIGTIASQVGGKG 843

Query: 940 KGKGGLASGQGTDAAQVTPA 959
            G+  +A   GTD  Q  PA
Sbjct: 844 GGRPDMAQAGGTD-VQALPA 862


>gi|165976064|ref|YP_001651657.1| alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|205829970|sp|B0BNS8.1|SYA_ACTPJ RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|165876165|gb|ABY69213.1| alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
          Length = 874

 Score =  587 bits (1514), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 361/939 (38%), Positives = 514/939 (54%), Gaps = 97/939 (10%)

Query: 61  TKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLT 120
           +++R +F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG      +    T
Sbjct: 5   SEIRQSFLDFFHSKGHTVVPSSSLVPENDPTLLFTNAGMNQFKDVFLGL-----EKRPYT 59

Query: 121 RACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KV 178
           RA   Q+C+RAGGKHNDL++VG    HHTFFEM+GN+SFGDYFK++AI++ WE LT  + 
Sbjct: 60  RATTAQRCVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKHDAIQFGWEYLTSPQW 119

Query: 179 YRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFWE 229
             LP ++LY T +          D+EA DIW K +  P   ++  G         DNFW 
Sbjct: 120 LGLPKEKLYVTVY--------ETDDEAYDIWNKIVGVPTDHIIRIGDNKGAPYASDNFWA 171

Query: 230 MGDTGPCGPCSEIHYDRTGNRDAASLVNN---DDPTCIEIWNIVFIQFNRESDGSLKPLP 286
           MGDTGPCGPC+EI YD  G      L  +   D    IE+WNIVF+QFNR +DG+++ LP
Sbjct: 172 MGDTGPCGPCTEIFYDH-GETFWGGLPGSPEEDGDRYIEVWNIVFMQFNRLADGTMEKLP 230

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
              VDTG+G ER+T+++Q+  SNY+TD+F  +   +         +G +   D D  + +
Sbjct: 231 KPSVDTGMGLERMTAVMQHVNSNYETDIFQTLIKEV---------AGLLNVSDLD--NKS 279

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            RVVADHIR  S+ IADG  P NEGR YVLRRI+RRAVR+G+ +L A++ FF  LV  + 
Sbjct: 280 LRVVADHIRACSYLIADGVVPSNEGRGYVLRRIIRRAVRHGN-LLGAKEAFFYKLVPTLA 338

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
            VMG     L Q++AHI++ + AEE  F +TL +G+   + A   V+   LSG+ AF L+
Sbjct: 339 TVMGHAGEVLTQKQAHIQKTLKAEEEQFARTLERGLALLEDALTKVENNTLSGEVAFKLY 398

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFPLDLT  +  ER L +D  GF   M   RER++++ N                  
Sbjct: 399 DTYGFPLDLTADVCRERELTIDEAGFEAEMTAQRERAKASSN--------------FGTD 444

Query: 527 KRGVLATDDSFKFIWFQD--HKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
              V+  +    FI + +   ++ I  +++  + ++++  G    I+L  + FYAE GGQ
Sbjct: 445 YNNVIKVEGQTDFIGYDNLEAQATIVGLFSNGKAVDTIQSGESAVIILDQTPFYAEMGGQ 504

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           + D G I     +F V + Q YG    HIG LT G+   S+G++V   V   RR  I  N
Sbjct: 505 VGDSGLISTEICNFTVNDTQKYGQVFGHIGQLTSGS--LSIGDKVTATVHATRRIAITAN 562

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ ALREVLGDHV QKGS+V    LRFDFS  + +    L  IE IVN +I+  
Sbjct: 563 HSATHLLHSALREVLGDHVAQKGSLVSENILRFDFSQPEAISKSQLEEIERIVNRKIREN 622

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
           + V  +   +  AK   G  A+FGE Y D VRVV +                   S ELC
Sbjct: 623 IQVTIETMDIESAKK-KGAMALFGEKYGDVVRVVGM----------------TEFSIELC 665

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKI--- 821
           GGTH+  T +   F L+SE  +A GIRR+ AVT   A  A E   + +K +  +++    
Sbjct: 666 GGTHVQRTGDIGLFKLVSEGAVAAGIRRVEAVT---AETAIEWLHNQQKVLQQSAEFLKA 722

Query: 822 -EGSLLEKNQVRKAQKKVAEENLQK-----AVKVATETAEAAAS-NGKPFCISRVEVGLD 874
              SL+EK Q  + + K  E+ LQ+     A +  +E  + A   NG    + ++E  ++
Sbjct: 723 DSNSLVEKIQQLQDKAKRTEKELQQLKDKLAAQAGSELVKQANKINGVNVVVQKLE-NVE 781

Query: 875 AAAVREAVLKVIEQKGMPVMVFST--DETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQ 932
             ++R  V  +  Q    ++VF T  DE  N   +  GV +  D S ++   E + A  Q
Sbjct: 782 VKSLRTMVDDLKNQLESAIVVFGTVADEKVN---LIVGVTK--DLSSKVNAGELVGAMAQ 836

Query: 933 PLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
            + G+ G G+  +A   G++   +  A+  A E+   KL
Sbjct: 837 QVGGKGG-GRADMAMAGGSEPQNLDNALKFAEEWIQAKL 874


>gi|156932779|ref|YP_001436696.1| alanyl-tRNA synthetase [Cronobacter sakazakii ATCC BAA-894]
 gi|205830089|sp|A7MJ41.1|SYA_CROS8 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|156531033|gb|ABU75859.1| hypothetical protein ESA_00569 [Cronobacter sakazakii ATCC BAA-894]
          Length = 875

 Score =  587 bits (1514), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 363/930 (39%), Positives = 516/930 (55%), Gaps = 81/930 (8%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT  + +
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQYAWELLTGEQWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
            LP DRL+ T +          D+EA +IW K   +P  R++  G         DNFW+M
Sbjct: 122 NLPKDRLWVTVY--------ETDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNY+ D+F  +  A+   TGA   S K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYEIDLFQKLIKAVANVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRA+R+G+ +L A+D FF  LV  +V V
Sbjct: 283 VIADHIRSCAFLIADGVIPSNENRGYVLRRIIRRAIRHGN-MLGAKDTFFYKLVGPLVDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    ELK+++A + +++  EE  F +TL +G+    +    + G  L G+ AF L+DT
Sbjct: 342 MGVAGEELKRQQAQVEQVLKTEEEQFARTLERGLALLDEELSKLTGDTLDGETAFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF  AM+E R R+R +            AD  A +   
Sbjct: 402 YGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSG--------FGADYNAMIRVD 453

Query: 529 GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDE 588
           G       FK     +  + + A++   + +E V  G +  +VL  + FYAE GGQ+ D+
Sbjct: 454 GA----SEFKGYDHTELTAKVTALFVDGKSVEQVTAGQQAVVVLDETPFYAESGGQVGDK 509

Query: 589 GFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
           G ++G   +F V + Q YG  + HIG L  G     VGE V  +VD+ RR  I  NH+ T
Sbjct: 510 GELKGNGFTFTVNDTQKYGQAIGHIGELASGV--LKVGEGVKAEVDHARRDRIRLNHSAT 567

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+++ ALR+VLG HV QKGS+V  + LRFDFSH + + PE +R++E +VN QI+  L + 
Sbjct: 568 HLMHAALRQVLGTHVAQKGSLVNDKGLRFDFSHFEAMKPEEIRKVEDLVNAQIRRNLPIE 627

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
           +    L  AK   G  A+FGE Y D VRV+++G                  S ELCGG H
Sbjct: 628 TNVMDLEAAKA-KGAMALFGEKYEDRVRVLSMG----------------DFSTELCGGIH 670

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEK 828
            S T +   F ++SE G A G+RRI AVT   A     A      E+    K +   L  
Sbjct: 671 ASRTGDIGLFRIVSESGTAAGVRRIEAVTGEGALSLVHAQNDRLNELSHLLKSDSQTLND 730

Query: 829 N------QVRKAQKKVAEENLQKAVK-VATETAEAAASNGKPFCISRVEVGLDAAAVREA 881
                  + R+ +K++ +   Q+A +  A  +++A   NG    +S +  G++   +R  
Sbjct: 731 KVRAMVERTRQLEKELQQLKEQQAAQESANLSSKAVDINGVKLLVSEL-AGVEPKMLRTM 789

Query: 882 VLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKG 941
           V  +  Q G  V+V +T     K  + AGV +  D + +++  E +    Q + G+ G G
Sbjct: 790 VDDLKNQLGSSVIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELVGMIAQQVGGKGG-G 845

Query: 942 KGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           +  +A   G+DAA +  A+     +   KL
Sbjct: 846 RPDMAQAGGSDAAALPAALGSVESWVTAKL 875


>gi|410631235|ref|ZP_11341913.1| alanyl-tRNA synthetase [Glaciecola arctica BSs20135]
 gi|410149222|dbj|GAC18780.1| alanyl-tRNA synthetase [Glaciecola arctica BSs20135]
          Length = 865

 Score =  587 bits (1514), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 353/917 (38%), Positives = 500/917 (54%), Gaps = 87/917 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  + H    SS +VP NDPTLLF NAGMNQ+K +FLGT     +     +
Sbjct: 7   EIRCAFLDFFAARGHQKVSSSSLVPANDPTLLFTNAGMNQFKDVFLGT-----ESRSYDK 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A ++Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK EAI++AW+ LT    L
Sbjct: 62  ATSSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKTEAIQYAWDFLTTELGL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           P D+L  T +          D+EA DIW     LP  R++     DNFW MGDTGPCGPC
Sbjct: 122 PKDKLLVTIY--------HEDDEAFDIWANKIGLPEDRIIRISTSDNFWSMGDTGPCGPC 173

Query: 240 SEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFE 297
           SEI YD   +           D    IEIWN+VF+QFNR+SDG+++PLP   +DTG+G E
Sbjct: 174 SEIFYDHGEHIWGGPPGSPEEDGDRFIEIWNLVFMQFNRQSDGTMQPLPKPSIDTGMGLE 233

Query: 298 RLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRTL 357
           R+++ILQN  SNY+ D+F  + +A     G             DK D + RV+ADHIR+ 
Sbjct: 234 RISAILQNVHSNYEIDIFQNLIEATATVVGT-----------TDKQDKSLRVIADHIRSC 282

Query: 358 SFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELK 417
           SF I DG  P NEGR YVLRRI+RRAVR+G++ L A + FF  LV  +V  MGD +PEL 
Sbjct: 283 SFLICDGIIPSNEGRGYVLRRIIRRAVRHGNK-LGASEVFFYRLVEALVTQMGDAYPELA 341

Query: 418 QREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQ 477
                I +++  EE  F +TL +G+     A  ++   V+ G+  F L+DTYGFP DLT 
Sbjct: 342 ANRELIEKVLRTEEEQFSRTLERGMSILNDALNELTSNVVPGELVFKLYDTYGFPADLTN 401

Query: 478 LMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSF 537
            +A E+ L +D EGF  AM        +AQ K+A  A   D D    L       ++ + 
Sbjct: 402 DVAREKELSIDEEGFQAAM--------AAQRKRAQQASQFDTDYNEQLK------SNSTS 447

Query: 538 KFIWFQD--HKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLF 595
           +F  +    +++ I  ++   + +E +  G E  IVL  S FYAE GGQI D G ++   
Sbjct: 448 EFTGYDQVTNQAEIVELFANGQQVEKLSAGEEGVIVLDKSPFYAESGGQIGDTGVLKTTS 507

Query: 596 GSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFAL 655
           GSF VR+    G  + H G   +    F +G+ V  + D  RR+ I  NH+ TH+++ AL
Sbjct: 508 GSFEVRDTVKLGNAIAHKG---KADADFKLGDVVQAEFDVARREAIKLNHSATHLMHAAL 564

Query: 656 REVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLA 715
           ++VLG+HV+QKGS+V  ++ RFDFSH + V    L+ +E++VN+QI+A   + +K   L 
Sbjct: 565 KQVLGEHVNQKGSLVSADRFRFDFSHFEAVTNVELQSVETLVNQQIRANHSLQTKLMNLD 624

Query: 716 EAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREA 775
           EAK   G  A+FGE Y + VRVV +G                  S ELCGGTH++ T + 
Sbjct: 625 EAKDA-GAMALFGEKYAEDVRVVTMG----------------DFSMELCGGTHVNRTGDI 667

Query: 776 EAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKI--EGSLLEKNQVRK 833
             F ++SE GIA G+RRI AVT G A    ++      ++    K   +G  +    V +
Sbjct: 668 GLFKIVSESGIAAGVRRIEAVTGGKALDVVQSQSQQLSQMASLLKTDPQGLFIRIEHVLE 727

Query: 834 AQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPV 893
            Q K+ E+ L+K         +  ASN     +S V   +    V   VL+ IE K +  
Sbjct: 728 -QNKIVEKELEK-------LKQQLASNATTDVLSEV-YEIKGVKVLSTVLQGIEAKALRT 778

Query: 894 MVFSTDETTNKAVVCAGVPEKS----------DQSKQLEVSEWLTAALQPLKGRCGKGKG 943
           MV         A++  G+ E++          D   +++  E +    Q + G+ G G+ 
Sbjct: 779 MVDDFKNQLASAIIVLGIAEENKVSLIVGVTKDLVSKVKAGELVNFVAQQVGGKGG-GRP 837

Query: 944 GLASGQGTDAAQVTPAM 960
            +A   G+    +  A+
Sbjct: 838 DMAQAGGSQPQNLDSAI 854


>gi|262149022|ref|ZP_06028166.1| alanyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
 gi|262031167|gb|EEY49787.1| alanyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
          Length = 873

 Score =  587 bits (1514), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 353/904 (39%), Positives = 505/904 (55%), Gaps = 80/904 (8%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR  F  FFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI++AWE LT V +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           P +RL  T +          D+EA DIW K   +PA R++  G K        DNFW+MG
Sbjct: 122 PKERLLVTVY--------ETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKH 289
           DTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG+++PLP   
Sbjct: 174 DTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPS 233

Query: 290 VDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRV 349
           VDTG+G ER+++I+Q   SNY+ DVF  +  A   A G +           D  + + RV
Sbjct: 234 VDTGMGIERISAIMQGVHSNYEIDVFQTLIKAAADAIGYQ-----------DLTNQSLRV 282

Query: 350 VADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVM 409
           VADHIR+ +F I DG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF+ LV  + +VM
Sbjct: 283 VADHIRSCAFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGAFFHKLVGPLAEVM 341

Query: 410 GDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTY 469
           G    ELK+++A + +++  EE +FG+TL +G+     A   + G+VL G+  F L+DTY
Sbjct: 342 GTAGVELKKQQALVEKVLRIEEENFGRTLDRGMSILNDALDQLSGQVLDGETVFKLYDTY 401

Query: 470 GFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRG 529
           GFP DLT  +A ERG  +D  GF  AM+E R+R+R A      G    D ++        
Sbjct: 402 GFPADLTNDVARERGFSIDEAGFEQAMEEQRQRAREA------GQFGTDYNSLIK----- 450

Query: 530 VLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEG 589
             AT+  F        +SV++ ++     + ++  G++  IVL ++ FYAE GGQ  D G
Sbjct: 451 -SATNTEFCGYTASRGQSVVREMFVEGAEVSTLSAGDKAIIVLDNTPFYAESGGQCGDTG 509

Query: 590 FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTH 649
            ++   G F+V + Q  G  + H G + +G    + G++V   VD  RR  I+ NH+ TH
Sbjct: 510 VLKTDAGIFHVEDTQKLGNAIAHHGVIAQGV--LATGDQVDAIVDEKRRAAISLNHSATH 567

Query: 650 MLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS 709
           +L+ ALR+VLG+HV QKGS+V  E LRFDFSH + +    ++ +E +VN++++    + +
Sbjct: 568 LLHAALRKVLGEHVAQKGSLVRAETLRFDFSHLEAMTAAEIKEVERLVNQEVRRNHSIET 627

Query: 710 KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHL 769
               + EAK   G  A+FGE Y D VRV+++G                  S ELCGG H 
Sbjct: 628 NIMNIDEAKA-KGAMALFGEKYDDQVRVLSMG----------------DFSTELCGGIHA 670

Query: 770 SNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKN 829
           SNT +   F ++SE GIA GIRRI AVT   A    +A  +           +  LLEK 
Sbjct: 671 SNTGDIGLFKIISEGGIAAGIRRIEAVTGEGALDYLDAQQAQHDAKVSEMAAKAKLLEK- 729

Query: 830 QVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQK 889
           ++++ + K+A +     +    + A      G    ++++  G D  A+R  V  +  Q 
Sbjct: 730 EIQQLKDKLAAKESAGLINQVKQIA------GVNVLVAQLN-GADNKALRGMVDDLKNQL 782

Query: 890 GMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQ 949
              +++   +    K  + AGV   +D + +++  E +      + G+ G G+  +A   
Sbjct: 783 SSGIIMLG-NVAEGKVGLIAGVT--NDLTNKVKAGELVNMVALQVGGK-GGGRPDMAQAG 838

Query: 950 GTDA 953
           GTDA
Sbjct: 839 GTDA 842


>gi|78485931|ref|YP_391856.1| alanyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
 gi|123555227|sp|Q31F91.1|SYA_THICR RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|78364217|gb|ABB42182.1| alanyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
          Length = 864

 Score =  587 bits (1514), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 367/928 (39%), Positives = 507/928 (54%), Gaps = 88/928 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R  F  FF  + H    SSPVVP NDPTLLF NAGM Q+K  FLG      +  + 
Sbjct: 3   SAELRKAFLDFFVKQGHTAVHSSPVVPGNDPTLLFTNAGMVQFKETFLGQ-----ETREY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            RA + Q+CIRAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK EAI++AW  LT+  
Sbjct: 58  KRATSVQRCIRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIQYAWTFLTEEL 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFGCKDNFWEMGDTGPCG 237
            LP ++L+ T F          D EA DIWLK +   A R    G KDNFW MGDTGPCG
Sbjct: 118 GLPEEKLWITVF--------EEDREAEDIWLKEMGVSAERFSRCGAKDNFWSMGDTGPCG 169

Query: 238 PCSEIHYDRTGNRDAA--SLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLG 295
           PCSEI YD   +         + D    IEIWN+VF+QF+R  DG+L PLP   VDTG+G
Sbjct: 170 PCSEIFYDHGADVAGGPPGSPDEDGDRYIEIWNLVFMQFDRSEDGTLTPLPKPSVDTGMG 229

Query: 296 FERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIR 355
            ERL +++QN+ +NYD D+F  I     + TG +           D  + + RV+ADHIR
Sbjct: 230 LERLAAVMQNQHNNYDIDLFQAIVKKASELTGEK-----------DLANSSLRVIADHIR 278

Query: 356 TLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPE 415
           + +F + DG  P NEGR YVLRRI+RRA+R+G + L   D FF  LV  +V+ MG+ +PE
Sbjct: 279 SCAFMVVDGVLPSNEGRGYVLRRIIRRAIRHGYK-LGQTDIFFYQLVPTLVEQMGEAYPE 337

Query: 416 LKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDL 475
           L + +A++   +  EE  F +TL  G++  ++    + G V+SG  AF L+DTYGFPLDL
Sbjct: 338 LVKEQANVERALKLEEERFAETLENGMKILEEDIAQLSGSVISGSTAFKLYDTYGFPLDL 397

Query: 476 TQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDD 535
           T  +A ER L VD  GF   M+  R R+RSA N   G       D T + H         
Sbjct: 398 TADVARERNLSVDEAGFEQEMEAQRARARSASN--FGAQSKNKVDYTGSTH--------- 446

Query: 536 SFKFIWFQ--DHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEG 593
              FI ++  + ++ I AI+  +  +E    G E  ++L  + FYAE GGQ+ D+G +  
Sbjct: 447 ---FIGYEQDEAEAEIAAIFVDNVSVEKASEGQEAIVILNQTPFYAESGGQVGDQGSLTE 503

Query: 594 LFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNF 653
              SF+V N Q  G   +HIG +T  AG  SVG+ ++  +D   R+    NH+ TH+L+ 
Sbjct: 504 GMNSFHVDNCQKQGAAFLHIGKVT--AGSISVGQTILAHIDVKARRASERNHSATHLLHA 561

Query: 654 ALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEAT 713
           ALR VLG HV QKGS+V PE+LRFDFSH +P+  E L  IE +VN  I     V  +E  
Sbjct: 562 ALRTVLGTHVGQKGSLVQPERLRFDFSHFEPISAEQLLEIEQLVNHNIMLNAQVMMEEMD 621

Query: 714 LAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTR 773
           +  AK   G  A+FGE Y D VRVV +G                  S ELCGGTH++ T 
Sbjct: 622 IEAAKA-KGAMALFGEKYGDVVRVVDMG----------------DFSIELCGGTHVNWTG 664

Query: 774 EAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV--------DDASKIEGSL 825
           E   F + SE GIA G+RRI AVT      A++    +EK +         D  ++E  +
Sbjct: 665 EIGPFRITSESGIASGVRRIEAVT---GEAAWQTIYDMEKSLLNIAANLKTDKPQVESKV 721

Query: 826 LEKNQVRKAQKKVAEENLQKAVKVATETAEAAAS-----NGKPFCISRVEVGLDAAAVRE 880
               Q+   QK++ ++  Q   K+A+   +  AS     NG     + +E G D   +RE
Sbjct: 722 A---QLVTEQKELEKQLKQLQSKLASSQGDDLASSVTEVNGVNVLAAELE-GADVNTLRE 777

Query: 881 AVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGK 940
            + K +  K  P  +       +K  + AGV +    +  ++  E +    Q + G+ G 
Sbjct: 778 TLDK-LRDKLEPAAIVLAAVDGDKVSLVAGVSKSI--TGNVKAGELVNHVAQQVGGKGG- 833

Query: 941 GKGGLASGQGTDAAQVTPAMDLAAEFAA 968
           G+  +A   G D +++  A+    E+ A
Sbjct: 834 GRPDMAQAGGKDPSKLKEALASVKEWVA 861


>gi|402699258|ref|ZP_10847237.1| alanyl-tRNA ligase [Pseudomonas fragi A22]
          Length = 872

 Score =  587 bits (1514), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 364/894 (40%), Positives = 506/894 (56%), Gaps = 93/894 (10%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F +FFE++ H    SS +VP NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLRFFEEQGHTRVPSSSLVPNNDPTLLFTNAGMNQFKDCFLGQ-----EKRAY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           TRA ++QKC+RAGGK++DL++VG    HHTFFEMLGN+SFGDYFK +AI +AW  LT V 
Sbjct: 58  TRATSSQKCVRAGGKNSDLENVGYTARHHTFFEMLGNFSFGDYFKKDAINFAWTFLTGVL 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
           +LP D+L+ T +        A D+EA DIW K   +PA R++  G         DNFW M
Sbjct: 118 KLPEDKLWVTVY--------ASDDEAYDIWTKDVGVPAERMIRIGDNKGAPYASDNFWTM 169

Query: 231 GDTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
           GDTGPCGPC+EI YD      G    +   + D    IEIWN VF+QFNR +DG L PLP
Sbjct: 170 GDTGPCGPCTEIFYDHGPEIWGGPPGSP--DEDGDRYIEIWNNVFMQFNRTADGVLHPLP 227

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
           A  VDTG+G ER+++++Q+  SNYD D+F  +  A  QA G            A+    +
Sbjct: 228 APSVDTGMGLERISAVMQHVNSNYDIDLFQSLLQAAAQAIGC-----------ANDGQAS 276

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            +VVADHIR+ SF IADG  P NEGR YVLRRI+RRA R+G++ L A   FF  +V  +V
Sbjct: 277 LKVVADHIRSCSFLIADGVLPSNEGRGYVLRRIIRRACRHGNK-LGATGNFFYKIVAALV 335

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
             MG  FPEL + +A+I  ++ AEE  F KTL +G++  +    D++G V+ G   F L+
Sbjct: 336 AEMGASFPELVREQANIERVLKAEEEQFSKTLEQGLKILELDLADLKGTVVPGDVVFKLY 395

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFP+DLT  +A ER L VD EGF + M+  R R+RSA              ++  L 
Sbjct: 396 DTYGFPMDLTADIARERNLTVDEEGFEHEMEAQRVRARSA--------------SSFGLD 441

Query: 527 KRGVLATDDSFKFIWFQDHKSVIK--AIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
              ++  D   +FI +    S  K  A+Y   + + S+  G+E  +VL  + FYAE GGQ
Sbjct: 442 YNTLVKVDVPTEFIGYSATHSPAKVVALYKDGQSVASLNEGDEGVVVLDQTPFYAESGGQ 501

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           + D G+++     F VR+    GG  +H G +   AG   VGE V  +VD + R   A N
Sbjct: 502 VGDCGYLQAGGARFDVRDTTKTGGAFLHHGVVA--AGGLKVGETVEAQVDAEVRHATALN 559

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ ALR+VLG+HV QKGS+V  +++RFDFSH + + PE ++ +E IVN +I+  
Sbjct: 560 HSATHLLHAALRQVLGEHVQQKGSLVDSQRMRFDFSHFESIKPEQIKALEDIVNAEIRKN 619

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
             V ++E  +  AK   G  A+FGE Y D VRV+++G                + S ELC
Sbjct: 620 TPVETEETDIDTAKQ-KGAMALFGEKYGDNVRVLSMGG---------------NFSVELC 663

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGS 824
           GG H + T +     + SE G+A GIRRI AVT   A     AA    KE   AS I+GS
Sbjct: 664 GGIHANRTGDIGLMKITSEGGVASGIRRIEAVTGAAALAYLNAAEEQLKEA--ASLIKGS 721

Query: 825 LLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEV-----------GL 873
              +N V K    V E N Q   ++    A+AA++ G     S V+V           G 
Sbjct: 722 --RENLVDKL-SAVLERNRQLEKQLEQLQAKAASAAGDDLSSSAVDVKGVKVLTARLDGQ 778

Query: 874 DAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWL 927
           D  A+   V ++  + G  V++  +    +K V+ AGV +  D + QL+  + +
Sbjct: 779 DGKALLALVDQLKNKLGRAVILLGSVH-EDKVVLVAGVTK--DLTGQLKAGDLM 829


>gi|292487293|ref|YP_003530165.1| alanyl-tRNA synthetase [Erwinia amylovora CFBP1430]
 gi|292900336|ref|YP_003539705.1| alanyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|428784225|ref|ZP_19001717.1| alanyl-tRNA synthetase [Erwinia amylovora ACW56400]
 gi|291200184|emb|CBJ47312.1| alanyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291552712|emb|CBA19757.1| Alanyl-tRNA synthetase [Erwinia amylovora CFBP1430]
 gi|426277364|gb|EKV55090.1| alanyl-tRNA synthetase [Erwinia amylovora ACW56400]
          Length = 876

 Score =  587 bits (1514), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 362/939 (38%), Positives = 523/939 (55%), Gaps = 99/939 (10%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF+ K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      TR
Sbjct: 7   EIRQAFLDFFQSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGQDKRN-----YTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A ++Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK+EAI +AWELLT  + +
Sbjct: 62  AASSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHEAIAFAWELLTSSQWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFWEM 230
            LP ++L+ T +          D+EA +IW K +  P  R++  G         DNFW+M
Sbjct: 122 GLPKEKLWVTVY--------ETDDEAFNIWEKEIGVPRERIIRIGDNKGSAYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPCSEI +D   +           D    IEIWNIVF+QFNR++DG++ PLP  
Sbjct: 174 GDTGPCGPCSEIFFDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMLPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+T++LQ+  SNY+ D+F  +  ++ Q TGA   S K           + R
Sbjct: 234 SVDTGMGLERITAVLQHVNSNYEIDLFAQLIQSVAQVTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A+  FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVIPSNENRGYVLRRIIRRAVRHGN-MLGAEGTFFYKLVAPLIAV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK +++ + +++  EE  F KTL +G+    +  +++QG +L G+  F L+DT
Sbjct: 342 MGAAGDDLKSQQSQVEQVLRTEEEQFAKTLERGLALLDEELENLQGDMLDGETVFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           +GFP+DLT  +  ER L +D  GF  AM++ R+R+R             DA    + +  
Sbjct: 402 FGFPVDLTADVCRERNLKIDEAGFERAMEQQRQRAR-------------DASGFGSDYNN 448

Query: 529 GVLATDDSFKFIWFQDHK--SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
            V+  D + +F  +Q  +  + I AI+   +   ++  G E  IVL ++ FYAE GGQ+ 
Sbjct: 449 -VIRIDQASEFKGYQQLQLNAAISAIFVDGQAANTISAGQEGVIVLDATPFYAESGGQVG 507

Query: 587 DEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
           D G ++G   SF V N Q Y   + H G L    G   VG+ V  +VD  RR  I  NH+
Sbjct: 508 DTGKLQGNSASFIVSNTQKYAQAIGHSGKLA--IGELRVGDCVAAQVDEARRARIRLNHS 565

Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD 706
            TH+L+ ALR+VLG HV QKGS+V    LRFDFS  + + P+ +R++E IVN QI+  L 
Sbjct: 566 ATHLLHAALRQVLGQHVSQKGSLVNDTYLRFDFSQFEAMTPQEMRQVEEIVNAQIRRNLP 625

Query: 707 VFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGG 766
           + +    L  AK  +G  A+FGE Y D VRV+++G                  S ELCGG
Sbjct: 626 IETNIMELEAAKA-HGAMALFGEKYDDHVRVLSMG----------------DFSTELCGG 668

Query: 767 THLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSL-----EKEVDDASKI 821
           TH S T +   F + SE G A G+RRI AVT        E A +L     E+ VD A  +
Sbjct: 669 THASRTGDIGLFRITSESGTAAGVRRIEAVTG-------EGALALLYSQNEQLVDIAQLV 721

Query: 822 EGSLLEKNQVRKA---------QKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVG 872
           + +    N+  +A         ++    ++ Q A + A+ +++A A  G    +S +   
Sbjct: 722 KANHSNLNEKVRALIDHARALEKQLQQLKDQQAAQESASLSSKAIAVKGTKLLVSELS-D 780

Query: 873 LDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQ 932
           ++   +R  V  +  Q G  ++V +T     K  +  GV +  D + +++  E +    Q
Sbjct: 781 VEPKMLRTMVDDLKNQLGSAIIVLAT-VADGKVSLITGVTK--DLTDRIKAGELVGELAQ 837

Query: 933 PLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
            + G+ G G+  +A   GTDA  +  A+     + A KL
Sbjct: 838 KVGGK-GGGRPDMAQAGGTDAMALPAALAGVESWVAAKL 875


>gi|114562241|ref|YP_749754.1| alanyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
 gi|122300463|sp|Q085Z9.1|SYA_SHEFN RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|114333534|gb|ABI70916.1| alanyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
          Length = 874

 Score =  587 bits (1514), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 359/932 (38%), Positives = 514/932 (55%), Gaps = 87/932 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F K+FED  H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      TR
Sbjct: 7   ELRSAFLKYFEDNGHQVVDSSSLVPTNDPTLLFTNAGMNQFKDVFLGMDKRN-----YTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A  +Q+C+RAGGKHNDLD+VG    HHTFFEMLGN+SFGDYFK +AI +AW  LT+  +L
Sbjct: 62  ATTSQRCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEDAIRFAWTFLTETLKL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFWEMGD 232
           P +RL  T +          D+EA D+W + +  PA  ++  G         DNFW+MGD
Sbjct: 122 PKERLCVTIY--------ETDDEAYDLWTQKIGVPAENMIRIGDNKGGAFASDNFWQMGD 173

Query: 233 TGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           TGPCGPCSEI YD      G R        D    IEIWNIVF+Q+NR++DG + PLP  
Sbjct: 174 TGPCGPCSEIFYDHGDHIWGGRPGTP--EEDGDRFIEIWNIVFMQYNRQADGEMLPLPKP 231

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ +I+Q   SNY+ D+F  +     +  G      K           + R
Sbjct: 232 SVDTGMGIERIAAIMQGVHSNYEIDIFKQLIAKTAEIIGVTDLENK-----------SLR 280

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NEGR YVLRRI+RRAVR+G++ L A D FF  LV  ++ V
Sbjct: 281 VIADHIRSCAFLIADGVMPSNEGRGYVLRRIIRRAVRHGNK-LGANDAFFYKLVPTLISV 339

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MGD    LKQ +A + + + AEE  F +TL +G+     A   +QG  L G   F L+DT
Sbjct: 340 MGDAAIGLKQTQAIVEKALKAEEEQFARTLERGLVILDGALNSLQGDTLDGDTLFKLYDT 399

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +  ER + VD  GF +AM E R R+++A N          AD  + L   
Sbjct: 400 YGFPVDLTADVCRERDINVDEAGFESAMAEQRSRAQAAGN--------FGADYNSQL--- 448

Query: 529 GVLATDDSFK-FIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFD 587
            ++  + +F  +       +VI A+Y   + +++V  G +  +VL ++ FYAE GGQ+ D
Sbjct: 449 -IIDAETAFSGYTELTGQPNVI-ALYVDGKAVDTVKAGQDAVVVLDNTPFYAESGGQVGD 506

Query: 588 EGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTC 647
           +G +      F V + Q +G    H G L +  G+  +G+++  +VD   R     NH+ 
Sbjct: 507 KGLLTADGVVFTVADTQKFGPATGHQGQLAQ--GQLVIGQQLTAQVDKKLRHRTQLNHSV 564

Query: 648 THMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDV 707
           TH+L+ ALR+VLG HV QKGS+V PE+LRFDF+H + V P  L+ +E +VN QI+   ++
Sbjct: 565 THLLHAALRQVLGSHVSQKGSLVNPERLRFDFAHFEAVKPSELKAVEDLVNTQIRRNHEL 624

Query: 708 FSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGT 767
            + E  + EAK   G  A+FGE Y D VRVV +G                  S ELCGGT
Sbjct: 625 CTAEMAIDEAKE-KGAMALFGEKYDDQVRVVTMG----------------DFSIELCGGT 667

Query: 768 HLSNTREAEAFALLSEEGIAKGIRRITAVT--TGLAYKA-----FEAACSLEKEVDDASK 820
           H+  T +   F + SE GIA G+RRI AVT    +AY A      + A  L K  D AS 
Sbjct: 668 HVGRTGDIGLFKITSENGIAAGVRRIEAVTGIAAMAYIAEQQAMLDEAAQLLKS-DSASV 726

Query: 821 IEGSLLEKNQVRKAQKKVAE-ENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVR 879
           +     + ++V++ +K +++ ++   A   A    +A   NG    + +++ G+D  ++R
Sbjct: 727 VVKLKAQLDKVKQLEKDLSQLKDKLAAAASADMAGDAVEINGVKLLVKQLD-GIDPGSLR 785

Query: 880 EAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCG 939
             +   ++QK    ++        K  + AGV   +D +K+++  E +    Q + G+ G
Sbjct: 786 -GLQDELKQKLKSAIIVLGTAKDGKVNLIAGV--SNDLTKKVKAGELVAMVAQHVGGK-G 841

Query: 940 KGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
            G+  +A   GT    +  A+ L   +   +L
Sbjct: 842 GGRPDMAQAGGTQPENLAAALALVEPWVNERL 873


>gi|398991062|ref|ZP_10694218.1| alanine--tRNA ligase [Pseudomonas sp. GM24]
 gi|399016347|ref|ZP_10718564.1| alanine--tRNA ligase [Pseudomonas sp. GM16]
 gi|398105317|gb|EJL95426.1| alanine--tRNA ligase [Pseudomonas sp. GM16]
 gi|398141427|gb|EJM30348.1| alanine--tRNA ligase [Pseudomonas sp. GM24]
          Length = 872

 Score =  587 bits (1514), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 362/936 (38%), Positives = 520/936 (55%), Gaps = 90/936 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F +FFE++ H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLRFFEEQGHTRVASSSLIPGNDPTLLFTNAGMNQFKDCFLGQ-----EKRAY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           TRA ++QKC+RAGGK++DL++VG    HHTFFEMLGN+SFGDYFK +AI +AW  LT V 
Sbjct: 58  TRATSSQKCVRAGGKNSDLENVGYTARHHTFFEMLGNFSFGDYFKKDAITYAWTFLTGVL 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFWEM 230
           +LP ++L+ T +        A D+EA DIW K +  P  R++  G         DNFW M
Sbjct: 118 QLPKEKLWVTVY--------ASDDEAYDIWTKEIGVPVERMIRIGDNKGAPYASDNFWTM 169

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG L PLPA 
Sbjct: 170 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLPAP 229

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+++++Q+  SNYD D+F  +  A  +A         +G ++ D+  +  +
Sbjct: 230 SVDTGMGLERISAVMQHVNSNYDIDLFKNLLKASAEA---------IGCENGDQSSL--K 278

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           VV+DHIR+  F IADG  P NEGR YVLRRI+RRA R+G++ L A   FF  +V  +V  
Sbjct: 279 VVSDHIRSCGFLIADGVLPSNEGRGYVLRRIIRRACRHGNK-LGATGSFFYKIVAALVAE 337

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG+ FPELK+++++I  ++ AEE  F KTL  G++  ++   +++G V+ G   F L+DT
Sbjct: 338 MGEAFPELKKQQSNIERVLKAEEEQFSKTLEHGLKILEQDLLELKGTVVPGDVVFKLYDT 397

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +A ER L VD  GF   M+  R R+RSA              ++  L   
Sbjct: 398 YGFPMDLTADIARERSLTVDEAGFEREMEAQRVRARSA--------------SSFGLDYN 443

Query: 529 GVLATDDSFKFIWFQDHKSVIK--AIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
            ++  D + +F  ++D     K  AIY   + ++ +  G E  IVL  + FYAE GGQI 
Sbjct: 444 TLVKVDVATEFTGYKDTSGSAKIVAIYKDGQSVDVLNEGEEAVIVLNQTPFYAESGGQIG 503

Query: 587 DEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
           D G+++     F VR+    GG  +H G L  G+   ++G  V   VD + R   + NH+
Sbjct: 504 DCGYLQAGSARFDVRDTTKTGGAFLHHGVLDSGS--LTIGAPVETHVDAEVRHATSLNHS 561

Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD 706
            TH+L+ ALR+VLG+HV QKGS+V  ++LRFDFSH + + PE ++ +E IVN +I+    
Sbjct: 562 ATHLLHAALRQVLGEHVQQKGSLVDSQRLRFDFSHFEAIKPEQIKALEDIVNAEIRKNSA 621

Query: 707 VFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGG 766
           V ++E  +  AK   G  A+FGE Y D VRV+++G                  S ELCGG
Sbjct: 622 VETEETDIETAKN-KGAMALFGEKYGDNVRVLSMGG---------------DFSVELCGG 665

Query: 767 THLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLL 826
            H + T +     ++SE G+A G+RRI AVT   A     AA    KE   AS ++GS  
Sbjct: 666 IHANRTGDIGLLKIISEGGVASGVRRIEAVTGAQALAYLNAAEEQLKEA--ASLVKGS-- 721

Query: 827 EKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEV-----------GLDA 875
            ++ +      V E N Q   ++    A+AA++ G     S ++V           G DA
Sbjct: 722 -RDNLIDKLSAVLERNRQLEKQLEQLQAKAASAAGDDLSSSALDVKGVKVLAARLDGQDA 780

Query: 876 AAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLK 935
            A+   V ++  + G  V++  +     K V+ AGV +  D + QL+  + L        
Sbjct: 781 KALLALVDQLKNKLGRAVILLGSVH-EEKVVLVAGVTK--DLTGQLKAGD-LMKQAAAAV 836

Query: 936 GRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           G  G G+  +A G G DA  +  A+ L   F    L
Sbjct: 837 GGKGGGRPDMAQGGGVDAGALDGALALTVPFVEQGL 872


>gi|260767196|ref|ZP_05876138.1| alanyl-tRNA synthetase [Vibrio furnissii CIP 102972]
 gi|260617804|gb|EEX42981.1| alanyl-tRNA synthetase [Vibrio furnissii CIP 102972]
          Length = 860

 Score =  587 bits (1514), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 368/928 (39%), Positives = 519/928 (55%), Gaps = 92/928 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR  F  FFE K H    SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRRAFLSFFESKGHQIVDSSSLVPANDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI++AWE LT+V +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIKFAWEFLTEVLQL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           P +RL  T +          D+EA DIW K   +PA R++  G K        DNFW+MG
Sbjct: 122 PKERLLVTVY--------QTDDEAFDIWNKQVGIPADRIVRIGDKPGGKAYESDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
           DTGPCGPC+EI YD      G R  +     D    IEIWN VF+QFNR +DG ++PLP 
Sbjct: 174 DTGPCGPCTEIFYDHGEHIWGGRPGSP--EEDGDRFIEIWNNVFMQFNRHADGKMEPLPK 231

Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
             VDTG+G ER+++I+Q   SNY+ DVF  +  A             +G DD    + + 
Sbjct: 232 PSVDTGMGIERISAIMQGVHSNYEIDVFQTLIKAAADV---------IGYDDLS--NQSL 280

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RVVADHIR+ +F I DG  P NEGR YVLRRI+RRAVR+G++ L A+  FF  LV  +  
Sbjct: 281 RVVADHIRSCAFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAKGAFFYKLVGPLAD 339

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWD 467
           VMG    ELK++ A + +++  EE +FG+TL +G+    +A   + G  L G+  F L+D
Sbjct: 340 VMGSAGEELKKQHAIVEKVLRIEEENFGRTLDRGMAILNEALDALSGTELDGETVFKLYD 399

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
           TYGFP DLT  +A ERG  +D  GF  AM+E R+R+R A      G    D +       
Sbjct: 400 TYGFPADLTNDVARERGFTIDEAGFEAAMEEQRQRAREA------GHFGTDYNQ------ 447

Query: 528 RGVLATDDSFKFIWFQ--DHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
             ++  + + +F  +     +S I  ++   +   S+  G++  IVL  + FYAE GGQ 
Sbjct: 448 --LIKVEGATEFCGYSATQGESTITEMFVEGQAAASLSAGDKAIIVLNETPFYAESGGQC 505

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D G ++   G F+V + Q  G  + H G + EG   F+ G+ V   VD  RR  I+ NH
Sbjct: 506 GDAGVLKTDAGVFHVVDTQKLGNAIAHHGVMAEGV--FAQGDTVHAIVDAKRRAAISLNH 563

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+L+ ALR VLG+HV QKGS+V  E LRFDFSH + V    L+ +E +VNEQ++   
Sbjct: 564 SATHLLHAALRRVLGEHVTQKGSLVRAEGLRFDFSHLEAVSAAELKEVERLVNEQVRTNH 623

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    +  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 624 RIETNIMDIDAAKA-KGAMALFGEKYDEQVRVLSMG----------------DFSTELCG 666

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVT--TGLAYKAFEAACSLEKEVDDASKIEG 823
           G H S+T +   F + SE GIA GIRRI AVT    L Y   + A    K  D ASK +G
Sbjct: 667 GIHASSTGDIGLFKITSESGIAAGIRRIEAVTGEAALDYLDAQHAQFESKVADMASKAKG 726

Query: 824 SLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVL 883
             LEK +++  + K+A      A + A+ T++     G    +++++ G D  A+R  V 
Sbjct: 727 --LEK-EIQHLKDKLA------AKESASLTSKVKDIAGVKVLVAQLD-GADNKALRGMVD 776

Query: 884 KVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKG 943
           ++  Q G  +++   +   +K  + AGV +  D + +++  E +    Q + G+ G G+ 
Sbjct: 777 ELKNQLGSGIIMLG-NVADDKVGLIAGVTK--DLTSKVKAGELVNMVAQQVGGK-GGGRP 832

Query: 944 GLASGQGTDAAQVTPAMDLAAEFAAMKL 971
            +A   G+DAA +  A++    + A +L
Sbjct: 833 DMAQAGGSDAAALPSALESVDAWIAERL 860


>gi|393786683|ref|ZP_10374815.1| alanyl-tRNA synthetase [Bacteroides nordii CL02T12C05]
 gi|392657918|gb|EIY51548.1| alanyl-tRNA synthetase [Bacteroides nordii CL02T12C05]
          Length = 872

 Score =  587 bits (1513), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 327/747 (43%), Positives = 441/747 (59%), Gaps = 61/747 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A + RD+F  FFE K H    S+P+V  +DPTL+F NAGMNQ+K I LG        +K 
Sbjct: 4   AKETRDSFKNFFESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGN-----HPAKY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWE L  V 
Sbjct: 59  HRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKQEAISWAWEYLVDVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +L  + LYAT F G  + GL  DNEA   W +FLP   ++     DNFWEMGDTGPCGPC
Sbjct: 119 KLNPEYLYATVFEGSPEEGLERDNEAASYWEQFLPKDHIINGNKHDNFWEMGDTGPCGPC 178

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + A      LVN+D P  IEIWN+VF+Q+NR++DGSL+ LPAK +DTG+
Sbjct: 179 SEIHIDLRPAEERAKISGRDLVNHDHPQVIEIWNLVFMQYNRKADGSLEALPAKVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF P+  AI Q  G      + G D   + D+A RV+ADHI
Sbjct: 239 GFERLCMALQGKTSNYDTDVFQPMIKAIAQMAGV-----EYGKD--KQQDVAMRVIADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++F+I DG  P N    YV+RRILRRAVRYG   L  +  F   L+ ++++ MG+ +P
Sbjct: 292 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLIENMGEAYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ--GKV-LSGQDAFILWDTYGF 471
           EL  ++  I ++I  EE +F +TL  GI    K   D +  GK  +SG+DAF L+DT+GF
Sbjct: 352 ELIAQKGLIEKVIKEEEEAFLRTLETGIRLLDKTMADAKASGKTEISGKDAFTLYDTFGF 411

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E  + V+IE F+  M + ++R+R+A   + G  I++    +  +   G  
Sbjct: 412 PLDLTELILRENNMTVNIEEFDAEMQQQKQRARNAAAVETGDWIILKEGTSEFV---GYD 468

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            T+     + ++  K   + +Y                IVL S+ FYAE GGQ+ D G +
Sbjct: 469 YTEYEVSILRYRQIKQKNQTLYQ---------------IVLDSTPFYAESGGQVGDTGVL 513

Query: 592 EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHML 651
              F +  + + +      IH    T+          + C VD D+R   A NH+ TH+L
Sbjct: 514 VSEFETIEIIDTKKENNLPIH---FTKKLPEHLEAPMMAC-VDTDKRAACAANHSATHLL 569

Query: 652 NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS-K 710
           + ALREVLG+HV+QKGS+V PE LRFDFSH + V  E +RR+E +VN +I+A + +   +
Sbjct: 570 DEALREVLGEHVEQKGSLVTPESLRFDFSHFQKVTDEEMRRVEHLVNAKIRANIPLKEYR 629

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
              + EAK +  + A+FGE Y D VRV+  G                  S E CGG H++
Sbjct: 630 NIPIEEAKELGAI-ALFGEKYGDRVRVIQFGS-----------------SIEFCGGIHVA 671

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVT 797
            T       ++SE  +A G+RRI A T
Sbjct: 672 ATGSIGMIKIISESSVAAGVRRIEAYT 698


>gi|333907064|ref|YP_004480650.1| alanyl-tRNA synthetase [Marinomonas posidonica IVIA-Po-181]
 gi|333477070|gb|AEF53731.1| alanyl-tRNA synthetase [Marinomonas posidonica IVIA-Po-181]
          Length = 871

 Score =  587 bits (1513), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 367/925 (39%), Positives = 519/925 (56%), Gaps = 91/925 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           ++++R +F  +FE K H    SS +VP NDPTLLF NAGM Q+K +FLG       +   
Sbjct: 3   SSELRQSFLSYFESKQHQIVDSSSLVPGNDPTLLFTNAGMVQFKDVFLGD-----DIRPY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           TRA ++Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK EAI +AWE LT+V 
Sbjct: 58  TRATSSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKKEAIGFAWEFLTQVL 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
           +LP ++L  T +        A D+EA DIW K   LP  +++  G         DNFW M
Sbjct: 118 KLPTEKLLVTVY--------ADDDEAFDIWHKQIGLPTDKIIRIGDNKGGRYQSDNFWAM 169

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPCSE+ YD   +           D    IEIWN+VF+QFNR ++G + PLP  
Sbjct: 170 GDTGPCGPCSEVFYDHGEHIWGGPPGSAEEDGDRFIEIWNVVFMQFNRSANGDMSPLPKP 229

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ +ILQ   SNY+ D+F  +  A  +          VG DD      + R
Sbjct: 230 SVDTGMGLERIAAILQGVHSNYEIDLFQNLIKASAEV---------VGTDDLQA--QSLR 278

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ SF I DG  P NEGR YVLRRI+RRAVR+G+++ +A+  FF+ LV  +   
Sbjct: 279 VIADHIRSCSFMIVDGVVPSNEGRGYVLRRIIRRAVRHGNKLGQAKP-FFHKLVAALDAE 337

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG-KVLSGQDAFILWD 467
           MGD +PEL++ +  +  I+  EE  F KTL +G+   ++A + + G KVL G+  F L+D
Sbjct: 338 MGDAYPELRKLKERVTAILLKEEEQFAKTLDQGMRILEEAIEGLAGSKVLPGEAVFKLYD 397

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
           TYGFP DLT  +A E GL +D EGF  AM+  R R+RSA N        MD         
Sbjct: 398 TYGFPADLTNDVARENGLEIDEEGFEAAMEAQRARARSASN------FTMDMS------- 444

Query: 528 RGVLATDDSFKFIWFQ--DHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
            G L  D   +F  +   + + V++ I    E +E V  G +  ++L ++ FY E GGQ+
Sbjct: 445 -GSLDLDVQTEFTGYDQLEDRCVVETILLDGETVEFVEAGQQAVVILKNTPFYGESGGQV 503

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G++ G   +F V N    G   +H G L E  GR SVG+ V  +VD   R+  A NH
Sbjct: 504 GDQGWLSGGV-AFKVANTTKQGKAHLHHGELKE--GRLSVGDSVTAEVDRSMRQATALNH 560

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+++ ALR VLGDHV QKGS+V  E+LRFDFSH +      L +IE +VNEQI+   
Sbjct: 561 SATHLMHEALRRVLGDHVVQKGSLVDSERLRFDFSHFEGATAAELEQIEDMVNEQIRLNR 620

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            V ++   +  AK   G  A+FGE Y   VRV+ +G       AD         S ELCG
Sbjct: 621 PVETELMDIEAAKA-KGAMALFGEKYDSQVRVLTMG-------AD--------YSIELCG 664

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKI---- 821
           GTH+  T +   F +L+E GIA G+RRI AVT      A EA+ S+E  ++  + +    
Sbjct: 665 GTHVKRTGDIGLFKILTESGIAAGVRRIEAVT---GKAAVEASRSIESALNQVAGLVKGN 721

Query: 822 EGSLLEK-----NQVRKAQKKV-AEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDA 875
           + ++LEK     +Q R  QK++ A +    A+  A   ++A    G    +++VE   D 
Sbjct: 722 KDTVLEKVTVLNDQARALQKELDAIKGKLAAMAGADLASQAVDIRGGKLLVAQVEA--DP 779

Query: 876 AAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLK 935
            A+R+ +L  ++ K    ++        K  + AGV +  + +KQ++  + L   + PL 
Sbjct: 780 KALRD-MLDQLKSKLESAVILLASVNDGKVSLIAGVTK--ELTKQVKAGD-LIKMVAPLV 835

Query: 936 GRCGKGKGGLASGQGTDAAQVTPAM 960
              G G+  +A   G +   +  A+
Sbjct: 836 DGKGGGRPDMAQAGGNNPDALPSAL 860


>gi|375131999|ref|YP_004994099.1| alanyl-tRNA synthetase [Vibrio furnissii NCTC 11218]
 gi|315181173|gb|ADT88087.1| alanyl-tRNA synthetase [Vibrio furnissii NCTC 11218]
          Length = 860

 Score =  587 bits (1513), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 368/928 (39%), Positives = 518/928 (55%), Gaps = 92/928 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR  F  FFE K H    SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRRAFLSFFESKGHQIVDSSSLVPANDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI++AWE LT+V +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIKFAWEFLTEVLQL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           P +RL  T +          D+EA DIW K   +PA R++  G K        DNFW+MG
Sbjct: 122 PKERLLVTVY--------QTDDEAFDIWNKQVGIPADRIVRIGDKPGGKAYESDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
           DTGPCGPC+EI YD      G R  +     D    IEIWN VF+QFNR +DG ++PLP 
Sbjct: 174 DTGPCGPCTEIFYDHGEHIWGGRPGSP--EEDGDRFIEIWNNVFMQFNRHADGKMEPLPK 231

Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
             VDTG+G ER+++I+Q   SNY+ DVF  +  A             +G DD    + + 
Sbjct: 232 PSVDTGMGIERISAIMQGVHSNYEIDVFQTLIKAAADV---------IGYDDLS--NQSL 280

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RVVADHIR+ +F I DG  P NEGR YVLRRI+RRAVR+G++ L A+  FF  LV  +  
Sbjct: 281 RVVADHIRSCAFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAKGAFFYKLVGPLAD 339

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWD 467
           VMG    ELK++ A + +++  EE +FG+TL +G+    +A   + G  L G+  F L+D
Sbjct: 340 VMGSAGEELKKQHAIVEKVLRIEEENFGRTLDRGMAILNEALDALSGTELDGETVFKLYD 399

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
           TYGFP DLT  +A ERG  +D  GF  AM+E R+R+R A      G    D +       
Sbjct: 400 TYGFPADLTNDVARERGFTIDEAGFEAAMEEQRQRAREA------GHFGTDYNQ------ 447

Query: 528 RGVLATDDSFKFIWFQ--DHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
             ++  + + +F  +     +S I  ++   +   S+  G++  IVL  + FYAE GGQ 
Sbjct: 448 --LIKVEGATEFCGYSATQGESTITEMFVEGQAAASLSAGDKAIIVLNETPFYAESGGQC 505

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D G ++   G F+V + Q  G  + H G + EG   F+ G+ V   VD  RR  I+ NH
Sbjct: 506 GDAGVLKTDAGVFHVVDTQKLGNAIAHHGVMAEGV--FAQGDTVHAIVDAKRRAAISLNH 563

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+L+ ALR VLG+HV QKGS+V  E LRFDFSH + V    L+ +E +VNEQ++   
Sbjct: 564 SATHLLHAALRRVLGEHVMQKGSLVRAEGLRFDFSHLEAVSAAELKEVERLVNEQVRTNH 623

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
            + +    +  AK   G  A+FGE Y + VRV+++G                  S ELCG
Sbjct: 624 RIETNIMDIDAAKA-KGAMALFGEKYDEQVRVLSMG----------------DFSTELCG 666

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVT--TGLAYKAFEAACSLEKEVDDASKIEG 823
           G H SNT +   F + SE GIA GIRRI AVT    L Y   + A    K  D ASK +G
Sbjct: 667 GIHASNTGDIGLFKITSESGIAAGIRRIEAVTGEAALDYLDAQHAQFESKVADMASKAKG 726

Query: 824 SLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVL 883
             LEK +++  + K+A      A + A+ T++     G    +++++ G D  A+R  V 
Sbjct: 727 --LEK-EIQHLKDKLA------AKESASLTSKVKDIAGVKVLVAQLD-GADNKALRGMVD 776

Query: 884 KVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKG 943
           ++  Q G  +++   +   +K  + AGV +  D + +++  E +    Q + G+ G G+ 
Sbjct: 777 ELKNQLGSGIIMLG-NVADDKVGLIAGVTK--DLTSKVKAGELVNMVAQQVGGK-GGGRP 832

Query: 944 GLASGQGTDAAQVTPAMDLAAEFAAMKL 971
            +A   G+DA  +  A++    + A +L
Sbjct: 833 DMAQAGGSDAVALPSALESVDAWIAERL 860


>gi|385787400|ref|YP_005818509.1| alanyl-tRNA synthetase [Erwinia sp. Ejp617]
 gi|310766672|gb|ADP11622.1| Alanyl-tRNA synthetase [Erwinia sp. Ejp617]
          Length = 876

 Score =  587 bits (1513), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 362/935 (38%), Positives = 517/935 (55%), Gaps = 91/935 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF+ K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFQSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGQDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A ++Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK EAI +AWELLT  + +
Sbjct: 62  ATSSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIAFAWELLTSSQWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFWEM 230
            LP ++L+ T +          D+EA DIW K +  P  R++  G         DNFW+M
Sbjct: 122 GLPKEKLWVTVY--------ETDDEALDIWEKEIGVPRERIIRIGDNKGSAYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPCSEI +D   +           D    IEIWNIVF+QFNR+ DG++ PLP  
Sbjct: 174 GDTGPCGPCSEIFFDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQPDGTMLPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+T++LQ+  SNY+ D+F  +  ++ Q TGA   S K           + R
Sbjct: 234 SVDTGMGLERITAVLQHVNSNYEIDLFAQLIKSVAQLTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A+  FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVIPSNENRGYVLRRIIRRAVRHGN-MLGAEGTFFYKLVAPLIAV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK ++A + +++  EE  F KTL +G+    +  +++Q   L G+  F L+DT
Sbjct: 342 MGAAGDDLKSQQAQVEQVLKTEEEQFAKTLERGLALLDEELENLQSDTLDGETVFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           +GFP DLT  +  ER L +D  GF  AM++ R+R+R A             D    +H  
Sbjct: 402 FGFPADLTADVCRERNLKIDEAGFERAMEQQRQRARDASG--------FGCDYNNVIH-- 451

Query: 529 GVLATDDSFKFIWFQDHK--SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
                D + +F  +Q  +  + I AI+   +  +++  G E  IVL ++ FYAE GGQ+ 
Sbjct: 452 ----IDQASEFKGYQQLQLNAAITAIFVDGQAADTISAGREGVIVLDATPFYAESGGQVG 507

Query: 587 DEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
           D G ++G   SF V N Q Y   + H G L    G   VG+ V  +VD  RR  I  NH+
Sbjct: 508 DTGELQGNSASFIVSNTQKYAQAIGHSGKLA--TGELRVGDRVAAQVDEARRARIRLNHS 565

Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD 706
            TH+L+ ALR+VLG HV QKGS+V  + LRFDFSH + +  + +R++E IVN QI+  L 
Sbjct: 566 ATHLLHAALRQVLGQHVSQKGSLVNDKYLRFDFSHFEAMTQQEIRQVEEIVNAQIRRNLP 625

Query: 707 VFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGG 766
           + +    L  AK  +G  A+FGE Y D VRV+++G                  S ELCGG
Sbjct: 626 IETNIMELEAAKA-HGAMALFGEKYDDHVRVLSMG----------------DFSTELCGG 668

Query: 767 THLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKI----E 822
           TH + T +   F + SE G A G+RRI AVT      A     S  +++ D S +     
Sbjct: 669 THATRTGDIGLFRITSESGTAAGVRRIEAVT---GEGALAQLYSQNQQLADISHLVKANH 725

Query: 823 GSLLEKNQVRKAQKKVAEENLQK------AVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            +L EK +      +  E+ LQ+      A + A+ +++A A  G    +S +   ++  
Sbjct: 726 SNLSEKVRALIDHARALEKQLQQLKDQQAAQESASLSSKAIAVKGTKLLVSELS-DVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSAIIVLAT-VADGKVSLIAGVTK--DLTDRIKAGELVGELAQKVGG 841

Query: 937 RCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           + G G+  +A   GTDA  +  A+     + A KL
Sbjct: 842 K-GGGRPDMAQAGGTDAMALPAALAGVELWVAAKL 875


>gi|171321470|ref|ZP_02910415.1| alanyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
 gi|171093253|gb|EDT38456.1| alanyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
          Length = 874

 Score =  587 bits (1513), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 356/922 (38%), Positives = 509/922 (55%), Gaps = 82/922 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R+ F KFFE K H   +SS +VP NDPTL+F N+GM Q+K +FLGT DP       
Sbjct: 3   AAEIREKFLKFFESKGHTIVRSSSLVPGNDPTLMFTNSGMVQFKDVFLGT-DPRP----Y 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA   Q+ +RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI +AWELLT VY
Sbjct: 58  SRATTAQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIRFAWELLTTVY 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
           +LP D+L+ T +          D+EA DIW K   +P  R++  G         DNFW M
Sbjct: 118 QLPKDKLWVTVY--------QEDDEAYDIWAKEVGVPTERIIRIGDNKGARYASDNFWTM 169

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWN+VF+QFNR++ G++  LP +
Sbjct: 170 GDTGPCGPCTEIFYDHGPDVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQGNMTRLPKQ 229

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ERL ++LQ+  SNY+ D+F  +  A  + T           + +D  + + +
Sbjct: 230 SVDTGMGLERLAAVLQHVHSNYEIDLFQNLIKAAARVT-----------EISDLTNNSLK 278

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR  SF I DG  PGNEGR YVLRRI+RRA+R+G + L  +  FF+ LV  +V  
Sbjct: 279 VIADHIRACSFLIVDGVIPGNEGRGYVLRRIVRRAIRHGYK-LGRKGSFFHKLVADLVAE 337

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ---GKVLSGQDAFIL 465
           MG  +PELK+ E  + +++  EE  F +T+  G+   + A  DV+   GKVL G+ AF L
Sbjct: 338 MGAAYPELKEAEQRVTDVLRQEEERFFETIEHGMSILEAALADVEAKGGKVLDGELAFKL 397

Query: 466 WDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAAL 525
            DTYGFPLDLT  +  ERG+ VD   F++AM   RE++R+A   +          AT  L
Sbjct: 398 HDTYGFPLDLTADVCRERGMTVDEPAFDDAMARQREQARAAGKFK----------ATQGL 447

Query: 526 HKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
              G   T   ++ I F D K V  A+Y     +  V  G +  +VL  + FYAE GGQ+
Sbjct: 448 EYTGAKTTFHGYEEIAFDDAKVV--ALYVDGSAVNEVKAGQDAVVVLDHTPFYAESGGQV 505

Query: 586 FDEGFIEGLFGSFYVRN-VQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
            D+G +      F V + +++    V H G+L +G     +G+ +  ++D  RR     N
Sbjct: 506 GDQGVLANAATRFAVADTLKVQADVVGHHGTLEQGT--LKIGDVLRAEIDAHRRARTQRN 563

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+++ ALREVLG HV QKGS+V  EK RFDF+H  P+  + +RR+E IVN +I A 
Sbjct: 564 HSATHLMHKALREVLGAHVQQKGSLVDAEKTRFDFAHNAPMTDDEIRRVEQIVNNEILAN 623

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
                +     EA    G  A+FGE Y D VRV+ +G                  S ELC
Sbjct: 624 APGIVRVMPYDEA-VKGGAMALFGEKYGDEVRVLDLG-----------------FSRELC 665

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGS 824
           GGTH+  T +   F ++ E G+A GIRR+ A+T   A +  +   +   E   A K + S
Sbjct: 666 GGTHVHRTGDIGFFKIVVEGGVAAGIRRVEAITGDNAVRFVQDLDARMNEAAAALKAQPS 725

Query: 825 LLE------KNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAV 878
            L       ++QV+  +K++     + A     E A+ A   G  + ++    G DA  +
Sbjct: 726 ELTQRIAQVQDQVKSLEKELGALKSKLASSQGDELAQQATEVGGVYVLAATLDGADAKTL 785

Query: 879 REAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRC 938
           RE V K+ ++     +V +  E    +++    P   D SK+++  E +    Q + G+ 
Sbjct: 786 RETVDKLKDKLKSAAIVLAAVEGGKVSLIAGVTP---DASKKVKAGELVNFVAQQVGGKG 842

Query: 939 GKGKGGLASGQGTDAAQVTPAM 960
           G G+  +A   GTD A +  A+
Sbjct: 843 G-GRPDMAQAGGTDPANLPGAL 863


>gi|313205146|ref|YP_004043803.1| alanyl-tRNA synthetase [Paludibacter propionicigenes WB4]
 gi|312444462|gb|ADQ80818.1| alanyl-tRNA synthetase [Paludibacter propionicigenes WB4]
          Length = 869

 Score =  587 bits (1513), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 332/752 (44%), Positives = 441/752 (58%), Gaps = 71/752 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R +F  FF  K H    S+P+V  +DPTL+F NAGMNQ+K I LG  DP     K 
Sbjct: 3   SQEIRQSFLDFFASKGHKIVPSAPMVIKDDPTLMFTNAGMNQFKNIILGN-DP----IKY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAIEWAWE LT+V 
Sbjct: 58  SRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAIEWAWEYLTEVL 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +L  DRLY T F G    GL  D+EA  IW +FLP  R++    KDNFWEMGDTGPCGPC
Sbjct: 118 KLDKDRLYVTVFEGYAPEGLERDDEAAAIWAQFLPEHRIINGNKKDNFWEMGDTGPCGPC 177

Query: 240 SEIHYDRTGNR-----DAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D   N      D  +LVN   P  IEIWN VF+Q+NR++DGSL+ LPAK +DTG+
Sbjct: 178 SEIHIDIRDNDERAKIDGLTLVNGSHPQVIEIWNNVFMQYNRKADGSLEGLPAKVIDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   +Q   SNYDTDVF PI   I +  GA     + G D+  KVD+A RV+ADHI
Sbjct: 238 GFERLCMAMQGVQSNYDTDVFTPIIAEIGRVCGA-----EYGKDE--KVDIAMRVIADHI 290

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++F+I DG  P N    YV+RRILRRAVRYG   L  +  F   L+ ++ + MG  +P
Sbjct: 291 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQRHAFMYKLITVLSENMGKAYP 350

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKV---LSGQDAFILWDTYGF 471
           EL  ++  I ++I  EE SF +TL  GI+   K   D +      + G+ AF L+DT+GF
Sbjct: 351 ELLSQKTLIEKVIKEEEESFLRTLETGIKLLDKVMADSKAAAKTEIEGKVAFTLYDTFGF 410

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E    V+I+ FN+ M + +ER+R+A   + G  +              V 
Sbjct: 411 PLDLTELILRENNFTVNIDEFNSEMQKQKERARNAAATETGDWVT-------------VR 457

Query: 532 ATDDSFKFIWFQDHKSVI----KAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFD 587
             D  F    F +  + I    K      E+ +         IVL+ + FYAE GGQ+ D
Sbjct: 458 EGDSEFVGYDFNEADTEILRYRKVKQKNQEYYQ---------IVLSKTPFYAEMGGQVGD 508

Query: 588 EGFIEGLFGSFYVRNVQIYGGFVIHIGS-LTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
            G ++   GS  + + +      +HI + L E      V E     +D ++RK    NH+
Sbjct: 509 CGTLKSDHGSIDIIDTKKENNLAVHIANKLPE-----DVTETFTATIDIEKRKATECNHS 563

Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD 706
            TH+L+ ALREVLG HV+QKGS V P+ LRFDFSH + +  E +R +E+I N +I+    
Sbjct: 564 ATHLLHEALREVLGTHVEQKGSFVSPDALRFDFSHFQKLTKEEIRAVEAIANRKIRENYP 623

Query: 707 VFSKEAT-LAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
           +  +  T +AEA+ + G  A+FGE Y + VRV+  G                  S ELCG
Sbjct: 624 LQERRETPIAEAQAM-GAMALFGEKYGETVRVIQFGS-----------------SVELCG 665

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVT 797
           GTH+S T       +++E  IA GIRRI A+T
Sbjct: 666 GTHVSATGNIGLVRVVAESSIAAGIRRIEAIT 697


>gi|333901310|ref|YP_004475183.1| alanyl-tRNA synthetase [Pseudomonas fulva 12-X]
 gi|333116575|gb|AEF23089.1| alanyl-tRNA synthetase [Pseudomonas fulva 12-X]
          Length = 874

 Score =  587 bits (1513), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 350/878 (39%), Positives = 502/878 (57%), Gaps = 85/878 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F  FFE+K H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLSFFEEKGHTRVASSSLIPNNDPTLLFTNAGMNQFKDCFLGL-----EKRAY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           TRA  +QKC+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT  K
Sbjct: 58  TRAATSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHFAWEFLTGDK 117

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFW 228
             +LP ++L+ T +        A D+EA DIW K   +PA R++  G         DNFW
Sbjct: 118 WLKLPKEKLWVTVY--------ATDDEAYDIWTKEVGVPAERMIRIGDNKGAPYASDNFW 169

Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
            MGDTGPCGPC+EI +D   +           D    IEIWN VF+QFNR SDG L PLP
Sbjct: 170 TMGDTGPCGPCTEIFFDHGEHIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTSDGVLHPLP 229

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
           A  VDTG+G ER++++LQ+  SNY+ D+F  +  A  QA G            A+  D +
Sbjct: 230 APSVDTGMGLERISAVLQHVNSNYEIDLFQSLLAASAQAIGC-----------ANNGDAS 278

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            +VVADHIR+ SF IADG  P NEGR YVLRRI+RRA R+G++ L A+  FF+ +V  + 
Sbjct: 279 LKVVADHIRSCSFLIADGVTPSNEGRGYVLRRIIRRACRHGNK-LGAKGSFFHKIVAALA 337

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
             MG+ FPELKQ++AHI  ++  EE  F KTL +G++  ++   +++G V+ G+  F L+
Sbjct: 338 SEMGEAFPELKQQQAHIERVLKTEEEQFAKTLEQGLKILEQDLAELKGSVIPGEIIFKLY 397

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFP+DLT  +A ER L +D  GF   M+  R R+RSA              ++  + 
Sbjct: 398 DTYGFPMDLTGDIARERELTLDEAGFEREMEAQRVRARSA--------------SSFGVD 443

Query: 527 KRGVLATDDSFKFIWFQDH--KSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
              ++  D   +F+ +        +  +    + ++++  G E  +VL  + FYAE GGQ
Sbjct: 444 YNSLVKVDKDTRFLGYGATVASGELLVLLRDGQPVDTLNEGEEGVVVLDQTPFYAESGGQ 503

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           I D GF+EG    F VR+    GG  +H G +++G+   SVG  +  +VD   R     N
Sbjct: 504 IGDCGFLEGPGVRFDVRDTTKVGGAWLHHGVVSKGS--LSVGATINAEVDASVRTATGLN 561

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ ALR+VLG+HV QKGS+V  ++LRFDFSH + + PE L+ +E IVN +++  
Sbjct: 562 HSATHLLHAALRQVLGEHVQQKGSLVDSQRLRFDFSHFEAIKPEQLKELEEIVNREVRRN 621

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
             V ++E  +  AK   G  A+FGE Y D VRV+ +G                  S ELC
Sbjct: 622 TPVQTEEMDIESAKA-KGAMALFGEKYGDSVRVLTMGD---------------GFSVELC 665

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGS 824
           GG H + T +   F ++SE G+A G+RRI AVT   A+     A    KE   AS ++GS
Sbjct: 666 GGIHANRTGDIGVFKIVSEGGVAAGVRRIEAVTGAAAFAYLNGAEEQLKEA--ASLVKGS 723

Query: 825 ---LLEK-----NQVRKAQKKVAEENLQKAVKVATETAEAAAS-NGKPFCISRVEVGLDA 875
              LL+K     ++ R+ +K++ +   + A    ++ A +A    G     +R++ GLD 
Sbjct: 724 RDNLLDKLAAVIDRNRQLEKELEQLKAKAASAAGSDLAGSAVDVKGVKTLSARID-GLDG 782

Query: 876 AAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPE 913
             +   V ++  + G  V++    +  +K V+ AGV +
Sbjct: 783 KGLLALVDQLKNKLGSAVILLGGVQ-DDKVVLVAGVTQ 819


>gi|167034974|ref|YP_001670205.1| alanyl-tRNA synthetase [Pseudomonas putida GB-1]
 gi|166861462|gb|ABY99869.1| alanyl-tRNA synthetase [Pseudomonas putida GB-1]
          Length = 897

 Score =  587 bits (1513), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 354/917 (38%), Positives = 514/917 (56%), Gaps = 95/917 (10%)

Query: 40  FSASAVAAMPGADPQVVEWP--ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANA 97
           F+  +   +P      VE P  + ++R+ F +FFE++ H    SS ++P NDPTLLF NA
Sbjct: 4   FAVVSSTCLPNRAAVSVEEPMKSAEIREAFLRFFEEQGHTRVASSSLIPNNDPTLLFTNA 63

Query: 98  GMNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNW 157
           GMNQ+K  FLG      +    TRA ++QKC+RAGGKHNDL++VG    HHTFFEMLGN+
Sbjct: 64  GMNQFKDCFLGA-----EKRAYTRAVSSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNF 118

Query: 158 SFGDYFKNEAIEWAWELLT--KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FL 213
           SFGDYFK +AI +AW  LT  +   LP ++L+ T +        A D+EA DIW K   +
Sbjct: 119 SFGDYFKRDAITFAWTFLTSEQWLNLPKEKLWVTVY--------ATDDEAYDIWTKEVGV 170

Query: 214 PASRVLPFG-------CKDNFWEMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCI 264
           PA R++  G         DNFW MGDTGPCGPC+EI YD   +           D    I
Sbjct: 171 PAERMVRIGDNKGAPYASDNFWTMGDTGPCGPCTEIFYDHGPDIWGGPPGSPEEDGDRYI 230

Query: 265 EIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQ 324
           EIWN VF+QFNR +DG L PLPA  VDTG+G ER++++LQ+  SNY+ D+F  +  A  +
Sbjct: 231 EIWNNVFMQFNRTADGVLHPLPAPSVDTGMGLERVSAVLQHVHSNYEIDLFQNLLAAAAK 290

Query: 325 ATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAV 384
           A G            ++    + +VVADHIR+  F IADG  P NEGR YVLRRI+RRA 
Sbjct: 291 AIGC-----------SNDGQASLKVVADHIRSCGFLIADGVLPSNEGRGYVLRRIIRRAC 339

Query: 385 RYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEK 444
           R+G++ L A+  FF  +V  +   MG+ FPELK ++AHI  ++ AEE  F KTL +G+  
Sbjct: 340 RHGNK-LGAKGSFFYQIVAALAAEMGEAFPELKSQQAHIERVLKAEEEQFAKTLEQGLRI 398

Query: 445 FKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSR 504
            ++    ++G V+ G   F L+DTYGFP+DLT  +A ER L +D  GF   MD  RER+R
Sbjct: 399 LEQDLAQLKGDVVPGDVVFKLYDTYGFPMDLTADIARERELTIDEAGFEREMDAQRERAR 458

Query: 505 SAQNKQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQ--DHKSVIKAIYTGSEFIESV 562
           SA       A  MD ++        ++  D + +F+ +   + +  I A+Y   + ++ +
Sbjct: 459 SAS------AFGMDYNS--------LVKVDSATEFLGYDATEAQGKIIALYKDGQAVDQL 504

Query: 563 VPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGR 622
             G +  +VL  + FYAE GGQ+ D GF++     F VR+    GG  +H G +  GA  
Sbjct: 505 GEGEQGVVVLDRTPFYAESGGQVGDTGFLQAGAARFDVRDTTKTGGAFLHHGVVASGA-- 562

Query: 623 FSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHG 682
             +G  V  KVD D +   + NH+ TH+L+ ALR+VLG+HV QKGS+V  ++LRFDFSH 
Sbjct: 563 LVIGSPVEAKVDADVQHATSLNHSATHLLHEALRQVLGEHVQQKGSLVDSQRLRFDFSHF 622

Query: 683 KPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGR 742
           + + PE ++++E IVN +++    V ++   +  AK   G  A+FGE Y D VRV+++G 
Sbjct: 623 EALKPEQIKQLEDIVNREVRKNTAVETELTDIETAKA-KGAMALFGEKYGDTVRVLSMGG 681

Query: 743 KVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAY 802
                            S ELCGG H   T +   F ++SE G+A G+RRI AVT     
Sbjct: 682 ---------------DFSVELCGGIHAKRTGDISLFKIISEGGVASGVRRIEAVT---GA 723

Query: 803 KAFEAACSLEKEVDDASK-IEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNG 861
            A     + E++V +A++ ++G+   ++ +      V E N Q   ++    A+AA++ G
Sbjct: 724 AALAYLNAAEEQVKEAAQLVKGN---RDNLIDKLSAVLERNRQLEKQLEQLQAKAASAAG 780

Query: 862 KPFCISRVEV-----------GLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAG 910
                + VEV           G D  A+   V ++  + G  V++  + E   K V+ AG
Sbjct: 781 DDLSNAAVEVKGAKVLAARLDGQDGKALLALVDQLKNKLGHAVILLGS-EHEGKVVLVAG 839

Query: 911 VPEKSDQSKQLEVSEWL 927
           V +  D S QL+  + +
Sbjct: 840 VTK--DLSSQLKAGDLM 854


>gi|431803727|ref|YP_007230630.1| alanyl-tRNA ligase [Pseudomonas putida HB3267]
 gi|430794492|gb|AGA74687.1| alanyl-tRNA ligase [Pseudomonas putida HB3267]
          Length = 874

 Score =  587 bits (1513), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 350/895 (39%), Positives = 507/895 (56%), Gaps = 93/895 (10%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F +FFE++ H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLRFFEEQGHTRVASSSLIPNNDPTLLFTNAGMNQFKDCFLGA-----EKRAY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           TRA ++QKC+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AW  LT  K
Sbjct: 58  TRAVSSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAITFAWTFLTSEK 117

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFW 228
              LP ++L+ T +        A D+EA DIW K   +PA R++  G         DNFW
Sbjct: 118 WLNLPKEKLWVTVY--------ATDDEAYDIWTKEVGVPAERMVRIGDNKGAPYASDNFW 169

Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
            MGDTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG L PLP
Sbjct: 170 TMGDTGPCGPCTEIFYDHGPDIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLP 229

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
           A  VDTG+G ER++++LQ+  SNY+ D+F  +  A  +A G            +++   +
Sbjct: 230 APSVDTGMGLERVSAVLQHVHSNYEIDLFQNLLSAAAKAIGC-----------SNEGQAS 278

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            +VVADHIR+  F IADG  P NEGR YVLRRI+RRA R+G++ L A+  FF  +V  +V
Sbjct: 279 LKVVADHIRSCGFLIADGVLPSNEGRGYVLRRIIRRACRHGNK-LGAKGSFFYQIVAALV 337

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
             MG+ FPEL  ++AHI  ++ AEE  F KTL +G+   ++    ++G V+ G   F L+
Sbjct: 338 AEMGEAFPELNSQQAHIERVLKAEEEQFAKTLEQGLRILEQDLAQLEGDVVPGDVVFKLY 397

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFP+DLT  +A ER L +D  GF   MD  RER+RSA       A  MD ++     
Sbjct: 398 DTYGFPMDLTADIARERELTIDEAGFEREMDAQRERARSAS------AFGMDYNS----- 446

Query: 527 KRGVLATDDSFKFIWFQ--DHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
              ++  D + +F+ ++  + +  I A+Y   + ++ +  G +  +VL  + FYAE GGQ
Sbjct: 447 ---LVKVDSATEFLGYEATEGQGKIIALYKDGQAVDQLGEGEQGVVVLDRTPFYAESGGQ 503

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           + D G+++     F VR+    GG  +H G +  GA    +G  V  KVD D +   + N
Sbjct: 504 VGDTGYLQAGAARFDVRDTTKTGGAFLHHGVVASGA--LVIGSPVEAKVDADVQHATSLN 561

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ ALR+VLG+HV QKGS+V  ++LRFDFSH + V PE ++ +E IVN +++  
Sbjct: 562 HSATHLLHEALRQVLGEHVQQKGSLVDSQRLRFDFSHFEAVKPEQIKALEDIVNREVRKN 621

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
             V ++   +  AK   G  A+FGE Y D VRV+++G                  S ELC
Sbjct: 622 TAVETELTDIETAKA-KGAMALFGEKYGDTVRVLSMGG---------------DFSVELC 665

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK-IEG 823
           GG H   T +   F ++SE G+A G+RRI AVT      A     + E++V +A++ ++G
Sbjct: 666 GGIHAKRTGDISLFKIISEGGVASGVRRIEAVT---GAAALAYLNAAEEQVKEAAQLVKG 722

Query: 824 SLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEV-----------G 872
           +   ++ +      V E N Q   ++    A+AA++ G     + VEV           G
Sbjct: 723 N---RDNLIDKLSAVLERNRQLEKQLEQLQAKAASAAGDDLSNAAVEVKGAKVLAARLDG 779

Query: 873 LDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWL 927
            D  A+   V ++  + G  V++  + E   K V+ AGV +  D S QL+  + +
Sbjct: 780 QDGKALLALVDQLKNKLGHAVILLGS-EHEGKVVLVAGVTK--DLSSQLKAGDLM 831


>gi|212709394|ref|ZP_03317522.1| hypothetical protein PROVALCAL_00430 [Providencia alcalifaciens DSM
           30120]
 gi|422019431|ref|ZP_16365979.1| alanyl-tRNA ligase [Providencia alcalifaciens Dmel2]
 gi|212688306|gb|EEB47834.1| hypothetical protein PROVALCAL_00430 [Providencia alcalifaciens DSM
           30120]
 gi|414103270|gb|EKT64848.1| alanyl-tRNA ligase [Providencia alcalifaciens Dmel2]
          Length = 875

 Score =  587 bits (1513), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 356/934 (38%), Positives = 532/934 (56%), Gaps = 89/934 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSK--L 119
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG       L K   
Sbjct: 7   EIRQAFLDFFHTKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLG-------LDKRAY 59

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           +RA   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI +AWELLT  +
Sbjct: 60  SRATTAQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIRFAWELLTSEQ 119

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFW 228
            + LP +RL+ T +        A D+EA DIW K +  P  R++  G         DNFW
Sbjct: 120 WFNLPKERLWVTVY--------ATDDEAFDIWNKEIGVPVERIIRIGDNKGAPYASDNFW 171

Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
           +MGDTGPCGPC+EI YD   +           D    IEIWN+VF+QFNR+SDG+++PLP
Sbjct: 172 QMGDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNLVFMQFNRQSDGTMEPLP 231

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
              VDTG+G ER++++LQ+  SNY+ D+F  +  A  +ATGA   S K           +
Sbjct: 232 KPSVDTGMGLERISAVLQHVNSNYEIDIFRELIAAAAEATGATDLSNK-----------S 280

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            RV+ADHIR+ +F ++DG  P NEGR YVLRRI+RRAVR+G  +L A++ FF  LV+ ++
Sbjct: 281 LRVIADHIRSCAFLVSDGVIPSNEGRGYVLRRIIRRAVRHGY-MLGAKETFFYKLVSTLI 339

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
           KVMG    EL++++A + +++  EE  F +TL +G++   +    ++G  L G+ AF L+
Sbjct: 340 KVMGPAAEELQRQQALVEKVLKTEEEQFARTLERGLQLLDEELASLKGDTLEGETAFRLY 399

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFPLDLT  +  ER + VD  GF  AM++ R R+R +    A      D +A   + 
Sbjct: 400 DTYGFPLDLTADVCRERNIKVDEAGFERAMEDQRRRARESSGFGA------DYNALIKVD 453

Query: 527 KRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
           KR        F      + ++ I A+Y   + ++S+  G+E  ++L  ++FYAE GGQ+ 
Sbjct: 454 KRS------EFSGYQHDEQQATIIALYKDGQPVDSLHTGDEGLVILDKTAFYAESGGQVG 507

Query: 587 DEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
           D G +      F V + Q YG  + H+G +  G+    V   +   V+ +RR  I  NH+
Sbjct: 508 DTGVLTNDSAQFTVTDTQKYGQAIGHVGKVESGS--LVVNHRIAAIVNSERRNAIRLNHS 565

Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD 706
            TH+L+ ALR+VLG+HV QKGS+V  + LRFDFSH + +  + LR++E IVN QI+   +
Sbjct: 566 ATHLLHAALRQVLGEHVSQKGSLVNDKYLRFDFSHFEAMTQQQLRQVEDIVNAQIRQNSE 625

Query: 707 VFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGG 766
           + ++   L  AK   G  A+FGE Y + VRV+++G                  S ELCGG
Sbjct: 626 IETELMDLEGAKA-KGAMALFGEKYEERVRVLSMG----------------DFSIELCGG 668

Query: 767 THLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEG--- 823
           TH S T +   F++LSE G A G+RRI A T   A +   A       +  A  ++G   
Sbjct: 669 THASRTGDIGLFSILSESGTAAGVRRIEATTGAAAMEHLHAQSEQLSAI--AHLLKGDVN 726

Query: 824 SLLEK-----NQVRKAQKKVAE-ENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAA 877
           SL+EK     ++ R  +K++ + ++ Q + + A+ +++A    G    +S++    D   
Sbjct: 727 SLVEKVKAALDKSRNLEKEILQLKDQQASQESASLSSKAKDVKGIKLLVSQLS-DTDPKL 785

Query: 878 VREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGR 937
           +R  V  +  Q    ++V ST  + +K  +  GV   +D + +++  + ++   Q + G+
Sbjct: 786 LRTMVDDLKNQLKSAIIVLST-TSGDKVSIIVGVT--NDLTAKIKAGDLVSYVAQQVGGK 842

Query: 938 CGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
            G G+  +A   GTD + +  AM+   ++   KL
Sbjct: 843 GG-GRPDMAMAGGTDVSALPTAMESVEQWVDSKL 875


>gi|398801686|ref|ZP_10560924.1| alanine--tRNA ligase [Pantoea sp. GM01]
 gi|398091370|gb|EJL81815.1| alanine--tRNA ligase [Pantoea sp. GM01]
          Length = 875

 Score =  587 bits (1512), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 353/930 (37%), Positives = 512/930 (55%), Gaps = 81/930 (8%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF  K H    SS +VP NDPTLLF NAGM Q+K +FLG    +       R
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMVQFKDVFLGQDKRD-----YAR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK EAI +AWELLT  + +
Sbjct: 62  ATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKKEAIAYAWELLTGEQWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFWEM 230
           +LP +RL+ T +          D+EA +IW   +  P  R++  G         DNFW+M
Sbjct: 122 KLPKERLWVTVY--------ETDDEAFEIWANDIGVPRERIIRIGDNKGSAFASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI +D   +           D    IEIWNIVF+QFNR++DG+++PLP  
Sbjct: 174 GDTGPCGPCTEIFFDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMQPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ ++LQ+  SNY+ D+F  +  ++ Q TGA   + K           + R
Sbjct: 234 SVDTGMGLERIAAVLQHVNSNYEIDLFAKLIQSVAQVTGATDLNNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A++ FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVIPSNENRGYVLRRIIRRAVRHGN-MLGAKEAFFYKLVAPLIDV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK+++ H+   +  EE  F KTL +G+    +    +QG  L G+  F L+DT
Sbjct: 342 MGAAGEDLKRQQKHVENALKNEEEQFAKTLERGLALLDEELAKLQGDTLDGETVFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           +GFP DLT  +  ER L +D  GF  AM++ R+R+R A    A    V+  DA       
Sbjct: 402 FGFPADLTADVCRERNLKIDEAGFEAAMEQQRQRAREASGFGADYNNVIRIDA------- 454

Query: 529 GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDE 588
              ATD  FK     +  +V++A++   + +E +  G +  +VL  + FY E GGQ+ D 
Sbjct: 455 ---ATD--FKGYDHLELNAVVQALFVDGQQVEQISAGQDAVVVLDETPFYGESGGQVGDT 509

Query: 589 GFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
           G + G    F V++ Q YG  + HIG L+  +G+  VG+ +  +VD  RR  I  NH+ T
Sbjct: 510 GVLAGQNAEFSVQDTQKYGKAIGHIGKLS--SGQLRVGDRLHAQVDETRRARIRLNHSAT 567

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+L+ ALR+VLGDHV QKGS+V  + LRFDFSH + + P+ +R++E IVN QI+  L V 
Sbjct: 568 HLLHAALRQVLGDHVGQKGSLVNDKYLRFDFSHFEAMKPQEIRQVEDIVNAQIRRNLAVE 627

Query: 709 SKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTH 768
           ++   L +AK   G  A+FGE Y   VRV+ +G                  S ELCGG H
Sbjct: 628 TEIMDLDDAKE-KGAMALFGEKYDQRVRVLTMG----------------DFSTELCGGIH 670

Query: 769 LSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEK 828
              T +   F + SE G A G+RRI AVT   A     A      +V    K   S L +
Sbjct: 671 AVRTGDIGLFRIQSESGTAAGVRRIEAVTGEGALAQVNAQSQQLLDVAQLVKANSSNLNE 730

Query: 829 ------NQVRKAQKKVAE-ENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREA 881
                 + VR  +K++ +  + Q A + A+ +++A    G    +S +   ++   +R  
Sbjct: 731 KVRGLVDHVRALEKELQQLRDQQAAQESASLSSKAVEVKGTRLLVSELS-NVEPKMLRTM 789

Query: 882 VLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKG 941
           V  +  Q G  ++V +T E    +++     + +D+ K  E    L   L    G  G G
Sbjct: 790 VDDLKNQLGSAIIVLATVEAGKVSLIAGVTKDLTDRVKAGE----LIGELASQVGGKGGG 845

Query: 942 KGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           +  +A   GT+   +  A++   E+ + +L
Sbjct: 846 RPDMAQAGGTNPQALAGALEGVQEWVSNRL 875


>gi|307256675|ref|ZP_07538454.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10
           str. D13039]
 gi|306864723|gb|EFM96627.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10
           str. D13039]
          Length = 874

 Score =  587 bits (1512), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 361/939 (38%), Positives = 514/939 (54%), Gaps = 97/939 (10%)

Query: 61  TKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLT 120
           +++R +F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG      +    T
Sbjct: 5   SEIRQSFLDFFHSKGHTVVPSSSLVPENDPTLLFTNAGMNQFKDVFLGL-----EKRPYT 59

Query: 121 RACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KV 178
           RA   Q+C+RAGGKHNDL++VG    HHTFFEM+GN+SFGDYFK++AI++ WE LT  + 
Sbjct: 60  RATTAQRCVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKHDAIQFGWEYLTSPQW 119

Query: 179 YRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFWE 229
             LP ++LY T +          D+EA DIW K +  P   ++  G         DNFW 
Sbjct: 120 LGLPKEKLYVTVY--------ETDDEAYDIWNKIVGVPTDHIIRIGDNKGAPYASDNFWA 171

Query: 230 MGDTGPCGPCSEIHYDRTGNRDAASLVNN---DDPTCIEIWNIVFIQFNRESDGSLKPLP 286
           MGDTGPCGPC+EI YD  G      L  +   D    IE+WNIVF+QFNR +DG+++ LP
Sbjct: 172 MGDTGPCGPCTEIFYDH-GETFWGGLPGSPEEDGDRYIEVWNIVFMQFNRLADGTMEKLP 230

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
              VDTG+G ER+T+++Q+  SNY+TD+F  +   +         +G +   D D  + +
Sbjct: 231 KPSVDTGMGLERMTAVMQHVNSNYETDIFQTLIKEV---------AGLLNVSDLD--NKS 279

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            RVVADHIR  S+ IADG  P NEGR YVLRRI+RRAVR+G+ +L A++ FF  LV  + 
Sbjct: 280 LRVVADHIRACSYLIADGVVPSNEGRGYVLRRIIRRAVRHGN-LLGAKEAFFYKLVPTLA 338

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
            VMG     L Q++AHI++ + AEE  F +TL +G+   + A   V+   LSG+ AF L+
Sbjct: 339 TVMGHAGEVLTQKQAHIQKTLKAEEEQFARTLERGLALLEDALTKVENNTLSGEVAFKLY 398

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFPLDLT  +  ER L +D  GF   M   RER++++ N                  
Sbjct: 399 DTYGFPLDLTADVCRERELTIDEAGFEAEMTAQRERAKASSN--------------FGTD 444

Query: 527 KRGVLATDDSFKFIWFQD--HKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
              V+  +    FI + +   ++ I  +++  + ++++  G    I+L  + FYAE GGQ
Sbjct: 445 YNNVIKVEGQTDFIGYDNLEAQATIVGLFSNGKAVDTIQSGESAVIILDQTPFYAEMGGQ 504

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           + D G I     +F V + Q YG    HIG LT G+   S+G++V   V   RR  I  N
Sbjct: 505 VGDSGLISTEICNFAVNDTQKYGQVFGHIGQLTSGS--LSIGDKVTATVHATRRIAITAN 562

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ ALREVLGDHV QKGS+V    LRFDFS  + +    L  IE IVN +I+  
Sbjct: 563 HSATHLLHSALREVLGDHVAQKGSLVSENILRFDFSQPEAISKSQLEEIERIVNRKIRKN 622

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
           + V  +   +  AK   G  A+FGE Y D VRVV +                   S ELC
Sbjct: 623 IQVTIETMDIESAKK-KGAMALFGEKYGDVVRVVGM----------------TEFSIELC 665

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKI--- 821
           GGTH+  T +   F L+SE  +A GIRR+ AVT   A  A E   + +K +  +++    
Sbjct: 666 GGTHVQRTGDIGLFKLVSEGAVAAGIRRVEAVT---AETAIEWLHNQQKVLQQSAEFLKA 722

Query: 822 -EGSLLEKNQVRKAQKKVAEENLQK-----AVKVATETAEAAAS-NGKPFCISRVEVGLD 874
              SL+EK Q  + + K  E+ LQ+     A +  +E  + A   NG    + ++E  ++
Sbjct: 723 DSNSLVEKIQQLQDKAKRTEKELQQLKDKLAAQAGSELVKQANKINGVNVVVQKLE-NVE 781

Query: 875 AAAVREAVLKVIEQKGMPVMVFST--DETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQ 932
             ++R  V  +  Q    ++VF T  DE  N   +  GV +  D S ++   E + A  Q
Sbjct: 782 VKSLRTMVDDLKNQLESAIVVFGTVADEKVN---LIVGVTK--DLSSKVNAGELVGAMAQ 836

Query: 933 PLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
            + G+ G G+  +A   G++   +  A+  A E+   KL
Sbjct: 837 QVGGKGG-GRADMAMAGGSEPQNLDNALKFAEEWIQAKL 874


>gi|345880586|ref|ZP_08832133.1| alanyl-tRNA synthetase [Prevotella oulorum F0390]
 gi|343922863|gb|EGV33561.1| alanyl-tRNA synthetase [Prevotella oulorum F0390]
          Length = 886

 Score =  587 bits (1512), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 355/925 (38%), Positives = 508/925 (54%), Gaps = 72/925 (7%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A +VR+++ KFFE K H    S+P+V  +DPTL+F NAGMNQ+K I LGT DP     K 
Sbjct: 3   ANEVRESYKKFFEGKGHKIVPSAPMVIKDDPTLMFTNAGMNQWKDIILGTKDP----GKD 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK  AI++AWE L  V 
Sbjct: 59  VRRVDSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKEGAIDYAWEYLVDVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
            L  + LY T F G ++ GL+ D+EA   W K +    ++     DNFWEMG+TGPCGPC
Sbjct: 119 HLNPEDLYVTVFEGSKEEGLSRDDEAAKYWAKHVKPDHIINGNKHDNFWEMGETGPCGPC 178

Query: 240 SEIHYD-RTGNRDAA----SLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           +EIH D RT    A      LVN D+P  IEIWN+VF+Q+NR++DGSL+PLP   +DTG+
Sbjct: 179 TEIHVDSRTPEEKAKIPGRELVNKDNPQVIEIWNVVFMQYNRKADGSLEPLPMHVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQ----QATGARPYSGKV--GADDADKVDMAYR 348
           GFERL  +LQ+K SNYDTD+F PI   I+    Q  G    +GK+  G+ + +K+D+A R
Sbjct: 239 GFERLVRMLQDKHSNYDTDIFQPIIQQIEALSHQQYGFTTPTGKLGEGSTEQEKIDIAMR 298

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           VVADH+R ++F+IADG  P N    YV+RRILRRAVRY    L  ++ F   L+  +V  
Sbjct: 299 VVADHLRAVAFSIADGQLPSNAKAGYVIRRILRRAVRYAYTFLNQKEAFLYKLLPTLVHE 358

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV--QGKV-LSGQDAFIL 465
           MG  +PEL  ++  I  +I  EE SF +TL KGI        ++  QGK  L G  AF L
Sbjct: 359 MGAAYPELPAQQELISRVIKEEEDSFLRTLEKGINLLNADMDELTAQGKTELPGTQAFRL 418

Query: 466 WDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAAL 525
           +DTYGFP DLT+L+  E+G  VD +GF+  M + + R+R+A   + G   V+     A +
Sbjct: 419 FDTYGFPFDLTELICREKGFTVDEKGFDEEMAKQKARARNAAAVENGDWEVVREGEQAFV 478

Query: 526 HKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
              G   T+ +   + ++      K     + F E         +VL  + FY E GGQ+
Sbjct: 479 ---GYDYTEHTTHILRYR------KVTQKKNTFYE---------LVLDFTPFYGEMGGQV 520

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D+G +     +  V + +      IHI      A   ++  E +  VD ++R   A NH
Sbjct: 521 GDQGVLVNDDETIEVLDTKRENNQSIHIVK----ALPKNLQAEFMACVDTEKRNASAANH 576

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           T TH+L++AL++VLGDHV+QKGS V P  LRFDFSH + V  E LR++E +VN+ I+ + 
Sbjct: 577 TATHLLDYALKQVLGDHVEQKGSYVDPTTLRFDFSHFQKVSDEELRQVEQLVNQMIREDF 636

Query: 706 DV-FSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
            +   ++  L EAK +  + A+FGE Y D VRVV  G                  S E C
Sbjct: 637 PLDEHRDTPLEEAKALGAI-AIFGEKYGDKVRVVRFGP-----------------SCEFC 678

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV--------D 816
           GG H ++T     F ++SE  +A GIRRI A+T      A  AA     ++        D
Sbjct: 679 GGIHATSTGRIGFFKIMSESSVAAGIRRIEALTGKACEDAIYAATDTMNDLKAMFNNTKD 738

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
             + IE  + E +++RK  ++   +    AV+   E   +         +    + ++ A
Sbjct: 739 LKASIEKFISEHDELRKELERFQAQ----AVERTKEMLLSRIKEVNGISVITAVLPIEPA 794

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
           A ++ V K+ E     ++        NK ++     +   +  QL   + +  A + ++G
Sbjct: 795 AAKDLVFKLREAVPQKLVAVIGSTAHNKPLLTVMFSDDMVKEHQLNAGQIIREAAKLIQG 854

Query: 937 RCGKGKGGLASGQGTDAAQVTPAMD 961
             G G+   A   G +   +  A+D
Sbjct: 855 -GGGGQPHYAQAGGKNIDGMNAAVD 878


>gi|339488711|ref|YP_004703239.1| alanyl-tRNA synthetase [Pseudomonas putida S16]
 gi|338839554|gb|AEJ14359.1| alanyl-tRNA synthetase [Pseudomonas putida S16]
          Length = 878

 Score =  587 bits (1512), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 350/895 (39%), Positives = 507/895 (56%), Gaps = 93/895 (10%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F +FFE++ H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 7   SAEIREAFLRFFEEQGHTRVASSSLIPNNDPTLLFTNAGMNQFKDCFLGA-----EKRAY 61

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           TRA ++QKC+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AW  LT  K
Sbjct: 62  TRAVSSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAITFAWTFLTSEK 121

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFW 228
              LP ++L+ T +        A D+EA DIW K   +PA R++  G         DNFW
Sbjct: 122 WLNLPKEKLWVTVY--------ATDDEAYDIWTKEVGVPAERMVRIGDNKGAPYASDNFW 173

Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
            MGDTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG L PLP
Sbjct: 174 TMGDTGPCGPCTEIFYDHGPDIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLP 233

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
           A  VDTG+G ER++++LQ+  SNY+ D+F  +  A  +A G            +++   +
Sbjct: 234 APSVDTGMGLERVSAVLQHVHSNYEIDLFQNLLSAAAKAIGC-----------SNEGQAS 282

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            +VVADHIR+  F IADG  P NEGR YVLRRI+RRA R+G++ L A+  FF  +V  +V
Sbjct: 283 LKVVADHIRSCGFLIADGVLPSNEGRGYVLRRIIRRACRHGNK-LGAKGSFFYQIVAALV 341

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
             MG+ FPEL  ++AHI  ++ AEE  F KTL +G+   ++    ++G V+ G   F L+
Sbjct: 342 AEMGEAFPELNSQQAHIERVLKAEEEQFAKTLEQGLRILEQDLAQLEGDVVPGDVVFKLY 401

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFP+DLT  +A ER L +D  GF   MD  RER+RSA       A  MD ++     
Sbjct: 402 DTYGFPMDLTADIARERELTIDEAGFEREMDAQRERARSAS------AFGMDYNS----- 450

Query: 527 KRGVLATDDSFKFIWFQ--DHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
              ++  D + +F+ ++  + +  I A+Y   + ++ +  G +  +VL  + FYAE GGQ
Sbjct: 451 ---LVKVDSATEFLGYEATEGQGKIIALYKDGQAVDQLGEGEQGVVVLDRTPFYAESGGQ 507

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           + D G+++     F VR+    GG  +H G +  GA    +G  V  KVD D +   + N
Sbjct: 508 VGDTGYLQAGAARFDVRDTTKTGGAFLHHGVVASGA--LVIGSPVEAKVDADVQHATSLN 565

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ ALR+VLG+HV QKGS+V  ++LRFDFSH + V PE ++ +E IVN +++  
Sbjct: 566 HSATHLLHEALRQVLGEHVQQKGSLVDSQRLRFDFSHFEAVKPEQIKALEDIVNREVRKN 625

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
             V ++   +  AK   G  A+FGE Y D VRV+++G                  S ELC
Sbjct: 626 TAVETELTDIETAKA-KGAMALFGEKYGDTVRVLSMGG---------------DFSVELC 669

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK-IEG 823
           GG H   T +   F ++SE G+A G+RRI AVT      A     + E++V +A++ ++G
Sbjct: 670 GGIHAKRTGDISLFKIISEGGVASGVRRIEAVT---GAAALAYLNAAEEQVKEAAQLVKG 726

Query: 824 SLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEV-----------G 872
           +   ++ +      V E N Q   ++    A+AA++ G     + VEV           G
Sbjct: 727 N---RDNLIDKLSAVLERNRQLEKQLEQLQAKAASAAGDDLSNAAVEVKGAKVLAARLDG 783

Query: 873 LDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWL 927
            D  A+   V ++  + G  V++  + E   K V+ AGV +  D S QL+  + +
Sbjct: 784 QDGKALLALVDQLKNKLGHAVILLGS-EHEGKVVLVAGVTK--DLSSQLKAGDLM 835


>gi|387902001|ref|YP_006332340.1| alanyl-tRNA synthetase [Burkholderia sp. KJ006]
 gi|387576893|gb|AFJ85609.1| Alanyl-tRNA synthetase [Burkholderia sp. KJ006]
          Length = 874

 Score =  587 bits (1512), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 356/924 (38%), Positives = 511/924 (55%), Gaps = 86/924 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R+ F KFFE K H   +SS +VP NDPTL+F N+GM Q+K +FLGT          
Sbjct: 3   AAEIREKFLKFFESKGHTIVRSSSLVPGNDPTLMFTNSGMVQFKDVFLGT-----DQRPY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           TRA   Q+ +RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI +AWELLT VY
Sbjct: 58  TRATTAQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIRFAWELLTTVY 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
           +LP D+L+ T +          D+EA DIW K   +PA R++  G         DNFW M
Sbjct: 118 QLPKDKLWVTVY--------QEDDEAYDIWAKEVGVPAERIIRIGDNKGARYASDNFWTM 169

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWN+VF+QFNR++ G++  LP +
Sbjct: 170 GDTGPCGPCTEIFYDHGPDVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQGNMTRLPKQ 229

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ERL ++LQ+  SNY+ D+F  +  A  + T           + AD  + + +
Sbjct: 230 SVDTGMGLERLAAVLQHVHSNYEIDLFQNLIKAAARVT-----------ETADLNNNSLK 278

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR  SF I DG  PGNEGR YVLRRI+RRA+R+G + L  +  FF+ LV  +V  
Sbjct: 279 VIADHIRACSFLIVDGVIPGNEGRGYVLRRIVRRAIRHGYK-LGRKGAFFHKLVADLVAE 337

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ---GKVLSGQDAFIL 465
           MG  +PELK+ E  + +++  EE  F +T+  G+   + A  DV+   GKVL G+ AF L
Sbjct: 338 MGAAYPELKEAEQRVTDVLRQEEERFFETIEHGMSILEAALADVEAKGGKVLDGELAFKL 397

Query: 466 WDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAAL 525
            DTYGFPLDLT  +  ERG+ VD   F++AM   RE++R+A   +          AT  L
Sbjct: 398 HDTYGFPLDLTADVCRERGMTVDEPAFDDAMARQREQARAAGKFK----------ATQGL 447

Query: 526 HKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
              G   T   ++ I F D K V  A+Y     +  V  G +  +VL  + FYAE GGQ+
Sbjct: 448 EYTGAKTTFHGYEEIAFDDAKVV--ALYVEGSSVGEVKAGQDAVVVLDHTPFYAESGGQV 505

Query: 586 FDEGFIEGLFGSFYVRN-VQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
            D+G +      F V + +++    + H G+L +G     VG+ +  ++D  RR     N
Sbjct: 506 GDQGVLANAATRFAVADTLKVQADVIGHHGTLEQGT--LKVGDVLRAEIDAQRRARTQRN 563

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+++ ALREVLG HV QKGS+V  +K RFDF+H  P+  + +RR+E IVN++I A 
Sbjct: 564 HSATHLMHKALREVLGAHVQQKGSLVDADKTRFDFAHNAPLTDDEIRRVEQIVNDEILAN 623

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
                +     EA    G  A+FGE Y D VRV+ +G                  S ELC
Sbjct: 624 APGIVRVMPYDEA-VKGGAMALFGEKYGDEVRVLDLG-----------------FSRELC 665

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTG--------LAYKAFEAACSLEKEVD 816
           GGTH+  T +   F ++ E G+A GIRR+ A+T          L  +  EAA +L+ +  
Sbjct: 666 GGTHVQRTGDIGLFKIVVEGGVAAGIRRVEAITGDNAVRYVQELDARVNEAAAALKAQPS 725

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
           + ++    + E  QV+  +K++     + A     E A+ A   G  F ++    G DA 
Sbjct: 726 ELTQRIAQVQE--QVKSLEKELGALKSKLASSQGDELAQQAVEVGGVFVLAATLDGADAK 783

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +RE V K+ ++     +V +  E    +++    PE    SK+++  E +    Q + G
Sbjct: 784 TLRETVDKLKDKLKSAAIVLAAVEGGKVSLIAGVTPEA---SKKVKAGELVNFVAQQVGG 840

Query: 937 RCGKGKGGLASGQGTDAAQVTPAM 960
           + G G+  +A   GT+ A +  A+
Sbjct: 841 KGG-GRPDMAQAGGTEPANLPGAL 863


>gi|307249853|ref|ZP_07531828.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
 gi|306858107|gb|EFM90188.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
          Length = 874

 Score =  587 bits (1512), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 361/939 (38%), Positives = 514/939 (54%), Gaps = 97/939 (10%)

Query: 61  TKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLT 120
           +++R +F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG      +    T
Sbjct: 5   SEIRQSFLDFFHSKGHTVVPSSSLVPENDPTLLFTNAGMNQFKDVFLGL-----EKRPYT 59

Query: 121 RACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KV 178
           RA   Q+C+RAGGKHNDL++VG    HHTFFEM+GN+SFGDYFK++AI++ WE LT  + 
Sbjct: 60  RATTAQRCVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKHDAIQFGWEYLTSPQW 119

Query: 179 YRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFWE 229
             LP ++LY T +          D+EA DIW K +  P   ++  G         DNFW 
Sbjct: 120 LGLPKEKLYVTVY--------ETDDEAYDIWNKIVGVPTDHIIRIGDNKGAPYASDNFWA 171

Query: 230 MGDTGPCGPCSEIHYDRTGNRDAASLVNN---DDPTCIEIWNIVFIQFNRESDGSLKPLP 286
           MGDTGPCGPC+EI YD  G      L  +   D    IE+WNIVF+QFNR +DG+++ LP
Sbjct: 172 MGDTGPCGPCTEIFYDH-GETFWGGLPGSPEEDGDRYIEVWNIVFMQFNRLADGTMEKLP 230

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
              VDTG+G ER+T+++Q+  SNY+TD+F  +   +         +G +   D D  + +
Sbjct: 231 KPSVDTGMGLERMTAVMQHVNSNYETDIFQTLIKEV---------AGLLNVTDLD--NKS 279

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            RVVADHIR  S+ IADG  P NEGR YVLRRI+RRAVR+G+ +L A++ FF  LV  + 
Sbjct: 280 LRVVADHIRACSYLIADGVVPSNEGRGYVLRRIIRRAVRHGN-LLGAKEAFFYKLVPTLA 338

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
            VMG     L Q++AHI++ + AEE  F +TL +G+   + A   V+   LSG+ AF L+
Sbjct: 339 TVMGHAGEVLTQKQAHIQKTLKAEEEQFARTLERGLALLEDALTKVENNTLSGEVAFKLY 398

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFPLDLT  +  ER L +D  GF   M   RER++++ N                  
Sbjct: 399 DTYGFPLDLTADVCRERELTIDEAGFEAEMTAQRERAKASSN--------------FGTD 444

Query: 527 KRGVLATDDSFKFIWFQD--HKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
              V+  +    FI + +   ++ I  +++  + ++++  G    I+L  + FYAE GGQ
Sbjct: 445 YNNVIKVEGQTDFIGYDNLEAQATIVGLFSNGKAVDTIQSGESAVIILDQTPFYAEMGGQ 504

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           + D G I     +F V + Q YG    HIG LT G+   S+G++V   V   RR  I  N
Sbjct: 505 VGDSGLISTEICNFTVNDTQKYGQVFGHIGQLTSGS--LSIGDKVTATVHATRRIAITAN 562

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ ALREVLGDHV QKGS+V    LRFDFS  + +    L  IE IVN +I+  
Sbjct: 563 HSATHLLHSALREVLGDHVAQKGSLVSENILRFDFSQPEAISKSQLEEIERIVNRKIREN 622

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
           + V  +   +  AK   G  A+FGE Y D VRVV +                   S ELC
Sbjct: 623 IQVTIETMDIESAKK-KGAMALFGEKYGDVVRVVGM----------------TEFSIELC 665

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKI--- 821
           GGTH+  T +   F L+SE  +A GIRR+ AVT   A  A E   + +K +  +++    
Sbjct: 666 GGTHVQRTGDIGLFKLVSEGAVAAGIRRVEAVT---AETAIEWLHNQQKVLQQSAEFLKA 722

Query: 822 -EGSLLEKNQVRKAQKKVAEENLQK-----AVKVATETAEAAAS-NGKPFCISRVEVGLD 874
              SL+EK Q  + + K  E+ LQ+     A +  +E  + A   NG    + ++E  ++
Sbjct: 723 DSNSLVEKIQQLQDKVKRTEKELQQLKDKLAAQAGSELVKQANKINGVNVVVQKLE-NVE 781

Query: 875 AAAVREAVLKVIEQKGMPVMVFST--DETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQ 932
             ++R  V  +  Q    ++VF T  DE  N   +  GV +  D S ++   E + A  Q
Sbjct: 782 VKSLRTMVDDLKNQLESAIVVFGTVADEKVN---LIVGVTK--DLSSKVNAGELVGAMAQ 836

Query: 933 PLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
            + G+ G G+  +A   G++   +  A+  A E+   KL
Sbjct: 837 QVGGKGG-GRADMAMAGGSEPQNLDNALKFAEEWIQAKL 874


>gi|312884640|ref|ZP_07744343.1| alanyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309367732|gb|EFP95281.1| alanyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 860

 Score =  587 bits (1512), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 356/916 (38%), Positives = 511/916 (55%), Gaps = 88/916 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR+ F +FFE K H   +SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRNAFLQFFESKGHQIVESSSLVPHNDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A ++Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AWE LT++ +L
Sbjct: 62  ATSSQRCLRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKQDAIAFAWEFLTEILKL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFGCK--------DNFWEMG 231
           P DRL  T +          D+EA +IW + +  PA R++  G K        DNFW+MG
Sbjct: 122 PKDRLLVTVY--------ETDDEAFNIWNQQIGVPADRIVRIGDKKGGKPYESDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPA 287
           DTGPCGPC+EI YD      G R        D    IEIWN VF+QFNR +DG+++PLP 
Sbjct: 174 DTGPCGPCTEIFYDHGEHIWGGRPGTP--EEDGDRFIEIWNNVFMQFNRHADGTMEPLPK 231

Query: 288 KHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAY 347
             VDTG+G ER+++I+Q   SNY+ DVF  +  A  +       S           + + 
Sbjct: 232 PSVDTGMGIERISAIMQGVHSNYEIDVFQTLIKAAAEVISVEDLS-----------NQSL 280

Query: 348 RVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVK 407
           RV+ADHIR+ SF I DG  P NEGR YVLRRI+RRAVR+G++ L A+  FF  LV ++  
Sbjct: 281 RVIADHIRSCSFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAKGTFFFKLVGVLAD 339

Query: 408 VMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWD 467
           VMG    ELK+++A + +++  EE +FG+TL +G+     A      K L G+  F L+D
Sbjct: 340 VMGSAGEELKRQQALVEKVLRIEEENFGRTLERGMAILNDALDASADKTLDGETVFKLYD 399

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
           TYGFP DLT  +A ERG ++D  GF  AM+  R+R+R A      G    D +       
Sbjct: 400 TYGFPADLTNDVARERGFIIDEAGFEQAMEVQRQRARDA------GQFGTDYNEA----- 448

Query: 528 RGVLATDDSFKFIWFQDHKSV--IKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
              +  D + +F  +    ++  + A++  S  +ES+  G++  +VL  + FYAE GGQ 
Sbjct: 449 ---IKVDSATEFCGYTSTSALGTVDAMFVESRQVESLSAGDKAVLVLDETPFYAESGGQC 505

Query: 586 FDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNH 645
            D G I    G F V + Q  G  + H G + EG    +  ++V   VD  RR  I+ NH
Sbjct: 506 GDSGQICTDSGIFVVEDTQKLGNAIAHYGWMKEGV--LASKDKVEALVDKGRRNAISLNH 563

Query: 646 TCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAEL 705
           + TH+L+ ALR+VLG+HV QKGS+V  + LRFDFSH + +  + ++++E +VN+ ++   
Sbjct: 564 SATHLLHAALRKVLGEHVTQKGSLVKADNLRFDFSHLEAMTADEIKQVERLVNDHVRLNH 623

Query: 706 DVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
           DV +    +  AK   G  A+FGE Y D VRV+++G                  S ELCG
Sbjct: 624 DVETDIMDIESAKS-KGAMALFGEKYDDQVRVLSMG----------------DFSTELCG 666

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSL 825
           G H+S+T +   F + SE GIA GIRRI AVT   A    EA     +E    S  +   
Sbjct: 667 GIHVSSTGDIGLFKITSESGIAAGIRRIEAVTGDAALDVIEAQHQQYEEKLAESAQKTKA 726

Query: 826 LEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKV 885
           LEK +++K + K+A      A + A    +    NG    ++++E G D+  +R  V  +
Sbjct: 727 LEK-EIQKLKDKMA------AAESANIMGQVKEVNGVKVLVAKLE-GADSKNLRTMVDDI 778

Query: 886 IEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGL 945
             Q G  V++ + +   +K  + AGV +  D    ++  E +    + + G+ G G+  +
Sbjct: 779 KNQLGSGVVLLA-NVNQDKIGLIAGVTK--DLVGDVKAGELVKMVAEQIGGK-GGGRPDM 834

Query: 946 ASGQGTDAAQVTPAMD 961
           A   GTD   +  A+D
Sbjct: 835 AQAGGTDVTALPTAID 850


>gi|393781631|ref|ZP_10369825.1| alanyl-tRNA synthetase [Bacteroides salyersiae CL02T12C01]
 gi|392676235|gb|EIY69673.1| alanyl-tRNA synthetase [Bacteroides salyersiae CL02T12C01]
          Length = 872

 Score =  586 bits (1511), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 328/750 (43%), Positives = 442/750 (58%), Gaps = 67/750 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A + RD+F  FFE K H    S+P+V  +DPTL+F NAGMNQ+K I LG        +K 
Sbjct: 4   AKETRDSFKNFFESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGN-----HPAKY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWE L  V 
Sbjct: 59  HRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAWEYLVDVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +L  + LYAT F G  + GL  DNEA   W +FLP   ++     DNFWEMGDTGPCGPC
Sbjct: 119 KLNPEHLYATVFEGSPEEGLERDNEAASYWEQFLPKDHIINGNKHDNFWEMGDTGPCGPC 178

Query: 240 SEIHYD--------RTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVD 291
           SEIH D        +   RD   LVN+D P  IEIWN+VF+Q+NR++DGSL+ LPAK +D
Sbjct: 179 SEIHIDLRPAEERAKVSGRD---LVNHDHPQVIEIWNLVFMQYNRKADGSLESLPAKVID 235

Query: 292 TGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVA 351
           TG+GFERL   LQ K SNYDTDVF P+  AI +  G      + G D   + D+A RV+A
Sbjct: 236 TGMGFERLCMALQGKTSNYDTDVFQPMIKAIAKMAGV-----EYGKD--KQQDIAMRVIA 288

Query: 352 DHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGD 411
           DHIRT++F+I DG  P N    YV+RRILRRAVRYG   L  +  F   L+ +++  MGD
Sbjct: 289 DHIRTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGRKQAFMYKLLPVLIDNMGD 348

Query: 412 VFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ--GKV-LSGQDAFILWDT 468
            +PEL  ++  I ++I  EE +F +TL  GI    K   D +  GK  +SG+DAF L+DT
Sbjct: 349 AYPELIAQKGLIEKVIKEEEEAFLRTLETGIRLLDKTMADTKAAGKTEISGKDAFTLYDT 408

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           +GFPLDLT+L+  E G+ V+I  F+  M + ++R+R+A   + G  I++    +  +   
Sbjct: 409 FGFPLDLTELILRENGMTVNIGEFDAEMQQQKQRARNAAAIETGDWIILKEGTSEFV--- 465

Query: 529 GVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDE 588
           G   T+     + ++  K   + +Y                IVL  + FYAE GGQ+ D 
Sbjct: 466 GYDYTEYEVSILRYRQIKQKNQTLYQ---------------IVLDHTPFYAESGGQVGDT 510

Query: 589 GFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCT 648
           G +   F +  V + +      IHI   T+          + C VD D+R   A NH+ T
Sbjct: 511 GVLVSEFETIDVIDTKKENNLPIHI---TKKLPEHPDAPMMAC-VDTDKRAACAANHSAT 566

Query: 649 HMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVF 708
           H+L+ ALREVLG+HV+QKGS+V P+ LRFDFSH + V  E +R++E +VN +I+A + + 
Sbjct: 567 HLLDEALREVLGEHVEQKGSLVTPDSLRFDFSHFQKVTDEEIRKVEHMVNAKIRANIPLK 626

Query: 709 S-KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGT 767
             +   + EAK +  + A+FGE Y D VRV+  G                  S E CGGT
Sbjct: 627 EYRNIPIEEAKELGAI-ALFGEKYGDHVRVIQFGS-----------------SVEFCGGT 668

Query: 768 HLSNTREAEAFALLSEEGIAKGIRRITAVT 797
           H++ T       ++SE  +A G+RRI A T
Sbjct: 669 HVAATGSIGMIKIMSESSVAAGVRRIEAFT 698


>gi|387824680|ref|YP_005824151.1| alanyl-tRNA synthetase [Francisella cf. novicida 3523]
 gi|332184146|gb|AEE26400.1| Alanyl-tRNA synthetase [Francisella cf. novicida 3523]
          Length = 865

 Score =  586 bits (1511), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 351/927 (37%), Positives = 510/927 (55%), Gaps = 96/927 (10%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R+ F  +FE KNH +  SS ++P  D TLLF NAGM Q+K +FLG    +      +R
Sbjct: 6   ELRNKFINYFESKNHSHQPSSSLIPFGDDTLLFTNAGMVQFKDVFLGIEKRD-----FSR 60

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   QKC+RAGGKHNDLD+VG    HHTFFEMLGN+SFGDYFK EAI +AWE LTK  +L
Sbjct: 61  AVTVQKCLRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKKEAISFAWEFLTKEIKL 120

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLKF--LPASRVLPFGCKDNFWEMGDTGPCGPC 239
           P ++L+ T +        A D+EA D+W K   L   R++     DNFW MGDTGPCGPC
Sbjct: 121 PIEKLWVTIY--------ASDDEAFDVWHKHIGLAKERIIRIDSTDNFWSMGDTGPCGPC 172

Query: 240 SEIHYDRTGNRDAASL---VNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGF 296
           +EI YD  G   A  L      D    IEIWNIVF+Q+NR +DGS   LP   VDTG+G 
Sbjct: 173 TEIFYDH-GEDVAGGLPGTPEQDGDRYIEIWNIVFMQYNRHADGSTTDLPKPSVDTGMGL 231

Query: 297 ERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRT 356
           ER++++LQN  SNY+ D+F  +    QQ   AR  +             + RV+ADHIR 
Sbjct: 232 ERISAVLQNVHSNYEIDLFQALIKKAQQVINARDINSP-----------SLRVIADHIRA 280

Query: 357 LSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPEL 416
            +F IADG  P NEGR YVLRRI+RRAVR+G++ L A   FF  LV  ++  MG+ +P+L
Sbjct: 281 CAFLIADGVLPANEGRGYVLRRIIRRAVRHGNK-LGANQIFFYKLVAELINQMGEAYPQL 339

Query: 417 KQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLT 476
             +   I + +  EE  F KT+  GI+ F    ++++G  +SG+ AF L+DTYGFP DLT
Sbjct: 340 IDKRELIEKTLIKEEELFLKTIENGIKIFDAEIENLKGDTVSGEVAFKLYDTYGFPFDLT 399

Query: 477 QLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDS 536
             MA E+GL VD + F   M   ++RS+ A         ++++   +       L  D  
Sbjct: 400 ADMAREKGLKVDEQVFLAQMQVQKQRSKEAGKFNVDYNTLINSQVKSEFRGYSTLIED-- 457

Query: 537 FKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFG 596
                     + +  IY  S+ ++S+       +VL  + FYAE GGQ+ D+G +EG+  
Sbjct: 458 ----------AKVLEIYHDSQLVDSITEEASAVVVLDKTPFYAESGGQVGDKGVLEGVGF 507

Query: 597 SFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALR 656
            F V +VQ  G  ++HIG L +  GR +V +E+  +V    R   A NH+ TH+L+ AL+
Sbjct: 508 EFIVEDVQKSGEAILHIGKLVK--GRLNVNDELTAQVSDQPRLATAANHSATHLLHKALK 565

Query: 657 EVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAE 716
            +LG H +QKGS+V   +LRFDF+H K +    + +IE +VN+QI+A   V + E +  +
Sbjct: 566 VILGSHAEQKGSLVDENRLRFDFTHDKAISRSEIEQIELLVNQQIRANYPVATIETSQQK 625

Query: 717 AKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAE 776
           AK + G +A+FGE Y D VRV+++G                  S ELCGGTH++ T +  
Sbjct: 626 AKSL-GAQALFGEKYGDIVRVISMG----------------DFSIELCGGTHVAYTGDIG 668

Query: 777 AFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV---------DDASKIE--GSL 825
            F ++SE GIA GIRRI AVT   A KA     + E ++         +DA+ I+   S+
Sbjct: 669 LFKIISESGIASGIRRIEAVT---ADKAIRHTFTNENKIVAIKDSLKANDANLIDKLKSM 725

Query: 826 LEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEV------GLDAAAVR 879
           LE  Q++   K++A        K+  E    ++++ K   I  ++V      G+D   +R
Sbjct: 726 LE--QIKNQDKQIA--------KLKKELLSGSSNDIKETNIGDIKVVVANVDGVDVKTLR 775

Query: 880 EAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCG 939
           +   K+ + K     V +   TTN   V   +   +  +  ++  +        + G+ G
Sbjct: 776 D---KIDDYKSKNTKVIAVLTTTNADKVQFVIGVSNAMTTLIKAGDIAKELSSHIDGKGG 832

Query: 940 KGKGGLASGQGTDAAQVTPAMDLAAEF 966
            G+  +A G G ++A +  A+    +F
Sbjct: 833 -GRADMAQGGGNNSANIDQALSQVEKF 858


>gi|170701933|ref|ZP_02892858.1| alanyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
 gi|170133166|gb|EDT01569.1| alanyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
          Length = 874

 Score =  586 bits (1511), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 355/922 (38%), Positives = 509/922 (55%), Gaps = 82/922 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R+ F KFFE K H   +SS +VP NDPTL+F N+GM Q+K +FLGT DP       
Sbjct: 3   AAEIREKFLKFFESKGHTIVRSSSLVPGNDPTLMFTNSGMVQFKDVFLGT-DPRP----Y 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA   Q+ +RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI +AWELLT VY
Sbjct: 58  SRATTAQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIRFAWELLTTVY 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
           +LP D+L+ T +          D+EA DIW K   +P  R++  G         DNFW M
Sbjct: 118 QLPKDKLWVTVY--------QEDDEAYDIWAKEVGVPTERIIRIGDNKGARYASDNFWTM 169

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWN+VF+QFNR++ G++  LP +
Sbjct: 170 GDTGPCGPCTEIFYDHGPDVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQGNMTRLPKQ 229

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ERL ++LQ+  SNY+ D+F  +  A  + T           + +D  + + +
Sbjct: 230 SVDTGMGLERLAAVLQHVHSNYEIDLFQNLIKAAARVT-----------EISDLTNNSLK 278

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR  SF I DG  PGNEGR YVLRRI+RRA+R+G + L  +  FF+ LV  +V  
Sbjct: 279 VIADHIRACSFLIVDGVIPGNEGRGYVLRRIVRRAIRHGYK-LGRKGSFFHKLVADLVAE 337

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ---GKVLSGQDAFIL 465
           MG  +PELK+ E  + +++  EE  F +T+  G+   + A  DV+   GKVL G+ AF L
Sbjct: 338 MGGAYPELKEAEQRVTDVLRQEEERFFETIEHGMSILEAALADVEAKGGKVLDGELAFKL 397

Query: 466 WDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAAL 525
            DTYGFPLDLT  +  ERG+ VD   F++AM   RE++R+A   +          AT  L
Sbjct: 398 HDTYGFPLDLTADVCRERGMTVDEPAFDDAMARQREQARAAGKFK----------ATQGL 447

Query: 526 HKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
              G   T   ++ I F D K V  A+Y     +  V  G +  +VL  + FYAE GGQ+
Sbjct: 448 EYTGAKTTFHGYEEIAFDDAKVV--ALYVDGSAVNEVKAGQDAVVVLDHTPFYAESGGQV 505

Query: 586 FDEGFIEGLFGSFYVRN-VQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
            D+G +      F V + +++    V H G+L +G     +G+ +  ++D  RR     N
Sbjct: 506 GDQGLLANASTRFAVADTLKVQADVVGHHGTLEQGT--LKIGDVMRAEIDAHRRARTQRN 563

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+++ ALREVLG HV QKGS+V  EK RFDF+H  P+  + +RR+E IVN +I A 
Sbjct: 564 HSATHLMHKALREVLGAHVQQKGSLVDAEKTRFDFAHNAPMTDDEIRRVEQIVNNEILAN 623

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
                +     EA    G  A+FGE Y D VRV+ +G                  S ELC
Sbjct: 624 APGIVRVMPYDEA-VKGGAMALFGEKYGDEVRVLDLG-----------------FSRELC 665

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGS 824
           GGTH+  T +   F ++ E G+A GIRR+ A+T   A +  +   +   E   A K + S
Sbjct: 666 GGTHVHRTGDIGFFKIVVEGGVAAGIRRVEAITGDNAVRYVQDLDARMNEAAAALKAQPS 725

Query: 825 LLE------KNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAV 878
            L       ++QV+  +K++     + A     E A+ A   G  + ++    G DA  +
Sbjct: 726 ELTQRIAQVQDQVKSLEKELGALKSKLASSQGDELAQQATEIGGVYVLAATLDGADAKTL 785

Query: 879 REAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRC 938
           RE V K+ ++     +V +  E    +++    P   D SK+++  E +    Q + G+ 
Sbjct: 786 RETVDKLKDKLKSAAIVLAAVEGGKVSLIAGVTP---DASKKVKAGELVNFVAQQVGGKG 842

Query: 939 GKGKGGLASGQGTDAAQVTPAM 960
           G G+  +A   GT+ A +  A+
Sbjct: 843 G-GRPDMAQAGGTEPANLPGAL 863


>gi|386823227|ref|ZP_10110382.1| alanyl-tRNA synthetase [Serratia plymuthica PRI-2C]
 gi|386380014|gb|EIJ20796.1| alanyl-tRNA synthetase [Serratia plymuthica PRI-2C]
          Length = 875

 Score =  586 bits (1511), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 360/936 (38%), Positives = 534/936 (57%), Gaps = 93/936 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSK--L 119
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG       L K   
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLG-------LDKRAY 59

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           +RA  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI +AWELLT   
Sbjct: 60  SRATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAISYAWELLTGEN 119

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFW 228
            + LP +RL+ T +          D+EA DIW K +  PA R++  G         DNFW
Sbjct: 120 WFNLPKERLWVTVY--------ETDDEAFDIWQKQIGVPAERIIRIGDNKGAAFASDNFW 171

Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
           +MGDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR+SDG++ PLP
Sbjct: 172 QMGDTGPCGPCTEIFYDHGDHIWGGPPGSAEEDGDRYIEIWNIVFMQFNRQSDGTMLPLP 231

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
              VDTG+G ER+ ++LQ+  SNY+ D+F  +  A+ + TGA     K           +
Sbjct: 232 KPSVDTGMGLERIAAVLQHVNSNYEIDLFSKLITAVAKVTGAVDLDNK-----------S 280

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            RV+ADHIR+ +F ++DG  P +EGR YVLRRI+RRA+R+G+ +L A++ FF  LV  ++
Sbjct: 281 LRVIADHIRSCAFLVSDGVMPSSEGRGYVLRRIIRRAIRHGN-MLGAKESFFYKLVAPLI 339

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
           +VMG    ELK++++ + +++  EE  F +TL +G+    +    +QG  L G+ AF L+
Sbjct: 340 EVMGPAAEELKRQQSLVEQVLKTEEDQFARTLERGLALLDEELAKLQGDTLDGEAAFRLY 399

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFP+DLT  +  ERGL VD  GF  AM+  R R+R +            AD  +   
Sbjct: 400 DTYGFPVDLTADVCRERGLKVDEAGFELAMEAQRRRARESSG--------FGADYNS--- 448

Query: 527 KRGVLATDDSFKFIWF--QDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
              ++  DD+ +F  +  ++ ++ + A++   + +  +  G E  +VL  + FY E GGQ
Sbjct: 449 ---MIRVDDASQFSGYDREEQQATVTALFRDGQPVNEIHAGEEAVVVLDETPFYGESGGQ 505

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           + D+G ++     F V + Q YG  + H G L++G+    V + V  ++D  RR  I  N
Sbjct: 506 VGDKGVLKAAGADFVVSDTQKYGQAIGHQGKLSQGS--LKVKDRVDAQIDTARRNRIRLN 563

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ ALR+ LGDHV QKGS+V  + LRFDFSH + + PE +R +E +VN+QI+  
Sbjct: 564 HSATHLLHAALRQTLGDHVAQKGSLVNDKYLRFDFSHFEAMKPEQIRVVEDLVNQQIRRN 623

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
           L V +    L +AK   G  A+FGE Y D VRV+ +G                  S ELC
Sbjct: 624 LPVQTDVMALDDAKE-KGAMALFGEKYDDSVRVLTMG----------------DFSTELC 666

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEG- 823
           GGTH S T +   F +L+E G A GIRRI AVT   A         L ++V  A  ++G 
Sbjct: 667 GGTHASRTGDIGLFRILTESGTAAGIRRIEAVTGEGAIATLHQQNDLLQDV--AHLVKGD 724

Query: 824 --SLLEK-----NQVRKAQKKVAE-ENLQKAVKVATETAEAAASNGKPFCISRVEVGLDA 875
             +L +K     ++ R  +K++ + ++ Q A + A+ +++A   NG    +SR++  ++A
Sbjct: 725 SNNLTDKVRAVLDRTRALEKELQQLKDQQAAQESASLSSQAKMVNGVQLLVSRLD-NVEA 783

Query: 876 AAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLK 935
             +R  V  +  Q G  ++V +T    +K  + AGV +  D + +++  E +    Q + 
Sbjct: 784 KMLRTMVDDLKNQLGSAIIVLAT-TADDKVSLIAGVTK--DLTDRVKAGELIGQVAQQVG 840

Query: 936 GRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           G+ G G+  +A   GTD + +  A++    + A KL
Sbjct: 841 GKGG-GRPDMAQAGGTDVSALPAALNSVEAWVASKL 875


>gi|170732737|ref|YP_001764684.1| alanyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
 gi|205830047|sp|B1K026.1|SYA_BURCC RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|169815979|gb|ACA90562.1| alanyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
          Length = 874

 Score =  586 bits (1511), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 354/924 (38%), Positives = 513/924 (55%), Gaps = 86/924 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R+ F KFFE K H   +SS +VP NDPTL+F N+GM Q+K +FLGT DP       
Sbjct: 3   AAEIREKFLKFFESKGHTIVRSSSLVPGNDPTLMFTNSGMVQFKDVFLGT-DPRP----Y 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA   Q+ +RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT VY
Sbjct: 58  SRATTAQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIKFAWELLTTVY 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
           +LP D+L+ T +          D+EA DIW K   +P  R++  G         DNFW M
Sbjct: 118 QLPKDKLWVTVY--------QEDDEAYDIWAKEVGVPTERIIRIGDNKGARYASDNFWTM 169

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWN+VF+QFNR++ G++  LP +
Sbjct: 170 GDTGPCGPCTEIFYDHGPDVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQGNMTRLPKQ 229

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ERL ++LQ+  SNY+ D+F  +  A  + T           + +D  + + +
Sbjct: 230 SVDTGMGLERLAAVLQHVHSNYEIDLFQNLIKAAARVT-----------EISDLTNNSLK 278

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR  SF I DG  PGNEGR YVLRRI+RRA+R+G + L  +  FF+ LV  +V  
Sbjct: 279 VIADHIRACSFLIVDGVIPGNEGRGYVLRRIVRRAIRHGYK-LGRKGAFFHKLVADLVAE 337

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ---GKVLSGQDAFIL 465
           MG  +PELK+ E  + +++  EE  F +T+  G+   + A  DV+   GKVL G+ AF L
Sbjct: 338 MGTAYPELKEAEQRVTDVLRQEEERFFETIEHGMSILEAALADVEAKGGKVLDGELAFKL 397

Query: 466 WDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAAL 525
            DTYGFPLDLT  +  ERG+ VD   F++AM   RE++R+A   +          AT  L
Sbjct: 398 HDTYGFPLDLTADVCRERGMTVDEPAFDDAMARQREQARAAGKFK----------ATQGL 447

Query: 526 HKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
              G   T   ++ I F D K V  A+Y     +  V  G +  +VL  + FYAE GGQ+
Sbjct: 448 EYSGAKTTFHGYEEIAFDDAKVV--ALYVDGSAVNEVKAGQDAVVVLDHTPFYAESGGQV 505

Query: 586 FDEGFIEGLFGSFYVRN-VQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
            D+G +      F V + +++    + H G+L +G     VG+ +  ++D  RR     N
Sbjct: 506 GDQGVLANAATRFAVADTLKVQADVIGHHGTLEQGT--LKVGDVLRAEIDAQRRARTQRN 563

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+++ ALREVLG HV QKGS+V  +K RFDF+H  P+  + +RR+E IVN++I A 
Sbjct: 564 HSATHLMHKALREVLGAHVQQKGSLVDADKTRFDFAHNAPMTDDEIRRVEQIVNDEILAN 623

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
                +     EA    G  A+FGE Y D VRV+ +G                  S ELC
Sbjct: 624 APGIVRVMPYDEA-VKGGAMALFGEKYGDEVRVLDLG-----------------FSRELC 665

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTG--------LAYKAFEAACSLEKEVD 816
           GGTH+  T +   F ++ E G+A GIRR+ A+T          L  +  EAA +L+ +  
Sbjct: 666 GGTHVHRTGDIGLFKIVVEGGVAAGIRRVEAITGDNAVRYVQELDARVNEAAAALKAQPS 725

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
           + ++    + E  QV+  +K++     + A     E A+ A   G  + ++    G DA 
Sbjct: 726 ELTQRIAQVQE--QVKSLEKELGALKSKLASSQGDELAQQAVEIGGVYVLAATLDGADAK 783

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +RE V K+ ++     +V +  E    +++    P   D SK+++  E +    Q + G
Sbjct: 784 TLRETVDKLKDKLKSAAIVLAAVEGGKVSLIAGVTP---DASKKVKAGELVNFVAQQVGG 840

Query: 937 RCGKGKGGLASGQGTDAAQVTPAM 960
           + G G+  +A   GT+ A +  A+
Sbjct: 841 KGG-GRPDMAQAGGTEPANLPGAL 863


>gi|423280068|ref|ZP_17258981.1| alanyl-tRNA synthetase [Bacteroides fragilis HMW 610]
 gi|404584404|gb|EKA89069.1| alanyl-tRNA synthetase [Bacteroides fragilis HMW 610]
          Length = 872

 Score =  586 bits (1511), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 328/747 (43%), Positives = 441/747 (59%), Gaps = 61/747 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A + RD+F  FFE K H    S+P+V  +DPTL+F NAGMNQ+K I LG        +K 
Sbjct: 4   AKETRDSFKNFFESKGHQIVPSAPMVIKDDPTLMFTNAGMNQFKDIILGN-----HPAKY 58

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWE L  V 
Sbjct: 59  HRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWSFGDYFKKEAISWAWEYLIDVL 118

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           +L  + LYAT F G  +  L  DNEA  IW +FLP   ++     DNFWEMGDTGPCGPC
Sbjct: 119 KLNPEHLYATVFEGSPEERLERDNEAASIWEQFLPKDHIINGNKHDNFWEMGDTGPCGPC 178

Query: 240 SEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D     + A      LVN+D P  IEIWN+VF+Q+NR++D SL+PLPAK +DTG+
Sbjct: 179 SEIHIDLRPAEERAKISGRDLVNHDHPQVIEIWNLVFMQYNRKADSSLEPLPAKVIDTGM 238

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF P+  +I Q  G      + G ++ +  D+A RV+ADHI
Sbjct: 239 GFERLCMALQGKTSNYDTDVFQPLIKSIAQMAGT-----EYGKNEQN--DIAMRVIADHI 291

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           RT++F+I DG  P N    YV+RRILRRAVRYG   L  +  F   L+ +++  MGD +P
Sbjct: 292 RTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQKQAFMYKLLPVLIDSMGDAYP 351

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ--GKV-LSGQDAFILWDTYGF 471
           EL  ++  I ++I  EE SF +TL  GI    K   D +  GK  +SG+DAF L+DT+GF
Sbjct: 352 ELIAQKELIEKVIKEEEESFLRTLETGIRLLDKTMADTKATGKTEISGKDAFTLYDTFGF 411

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           PLDLT+L+  E G+ V+   F+  M + ++R+R+A   + G  I++    T  +   G  
Sbjct: 412 PLDLTELILRENGMTVNTVEFDAEMQQQKQRARNAAAIETGDWIILKEGTTEFV---GYD 468

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            T+     + ++  K   + +Y                IVL  + FYAE GGQ+ D G +
Sbjct: 469 YTEYETSILRYRQVKQKNQTLYQ---------------IVLDYTPFYAESGGQVGDTGVL 513

Query: 592 EGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHML 651
              F +  V + +      IHI   T+          + C V+ D+R   A NH+ TH+L
Sbjct: 514 VSEFETIEVIDTKKENNLPIHI---TKKLPEHPEAPMMAC-VNTDKRAACAANHSATHLL 569

Query: 652 NFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFS-K 710
           + ALREVLG+HV+QKGS+V P+ LRFDFSH + V  E LR++E +VN +I+A + +   +
Sbjct: 570 DEALREVLGEHVEQKGSLVTPDSLRFDFSHFQKVTDEELRKVEHLVNAKIRANVPLQEHR 629

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
              + EAK + G  A+FGE Y D VRV+  G                  S E CGGTH++
Sbjct: 630 NIPIEEAKEL-GAIALFGEKYGDHVRVIQFGS-----------------SIEFCGGTHVA 671

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVT 797
            T       ++SE  +A G+RRI A T
Sbjct: 672 ATGNIGMVKIISESSVAAGVRRIEAYT 698


>gi|365877951|ref|ZP_09417441.1| alanyl-tRNA synthetase [Elizabethkingia anophelis Ag1]
 gi|442587201|ref|ZP_21006020.1| alanyl-tRNA ligase [Elizabethkingia anophelis R26]
 gi|365754334|gb|EHM96283.1| alanyl-tRNA synthetase [Elizabethkingia anophelis Ag1]
 gi|442563074|gb|ELR80290.1| alanyl-tRNA ligase [Elizabethkingia anophelis R26]
          Length = 867

 Score =  586 bits (1511), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 339/883 (38%), Positives = 490/883 (55%), Gaps = 83/883 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R  F  FF++K H    S+P+V  +DPTL+F+N+GM Q+K  FLG  +P++     
Sbjct: 3   SQEIRQRFLDFFKEKGHQIVPSAPIVLKDDPTLMFSNSGMTQFKDFFLGYKEPSS----- 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            R  +TQKC+R  GKHNDLDDVG+DTYHHT FEMLGNWSFGDYFK EAI WAWELLT+VY
Sbjct: 58  LRIADTQKCLRVSGKHNDLDDVGRDTYHHTMFEMLGNWSFGDYFKKEAIAWAWELLTEVY 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPC 239
           ++  D LY T F GD    L  D +A + W + +  SR++    KDNFWEMGDTGPCGPC
Sbjct: 118 KISKDDLYVTIFEGDASENLERDQDAYNFWKEHIDESRIINGNKKDNFWEMGDTGPCGPC 177

Query: 240 SEIHYD-RTGNRDAA----SLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGL 294
           SEIH D R+    A      LVN D P  +E+WN+VF++F R++D SL+ LP ++VDTG+
Sbjct: 178 SEIHVDIRSAEEKAKVSGRELVNQDHPQVVEVWNLVFMEFLRKADKSLEKLPKQNVDTGM 237

Query: 295 GFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHI 354
           GFERL   LQ K SNYDTDVF P+   +++ +G + Y+G +     ++ D+A RVV DHI
Sbjct: 238 GFERLCMALQGKESNYDTDVFTPLISKVEEISG-KKYTGIL----ENEKDIAIRVVVDHI 292

Query: 355 RTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFP 414
           R ++FAIADG  P N G  YV+RRILRRA+ Y    L  ++ F   LV ++   MG  FP
Sbjct: 293 RAVAFAIADGQLPSNGGAGYVIRRILRRAISYAYRFLDMKEAFLYQLVAVLKDQMGSFFP 352

Query: 415 ELKQREAHIREIIAAEEASFGKTLLKGIEKFK---KAAQDVQGKVLSGQDAFILWDTYGF 471
           E+ ++E  + E+I  EE SF KT+  G+ +     +A  +   K L G+  F L+DT+GF
Sbjct: 353 EIVKQEKLVTEVIKEEENSFLKTIEHGLVRLDAIIQATINNNEKNLPGEQVFELYDTFGF 412

Query: 472 PLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVL 531
           P DL++++AEE+GL +D  GF   M++ ++RS+ +   +    ++++      +   G  
Sbjct: 413 PADLSRIIAEEKGLSIDEAGFEEEMNKQKQRSKQSSASKTYDWVILEEKPENFV---GYD 469

Query: 532 ATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI 591
            T++  K   ++      K      EF +         IVL  + FYAE GGQ+ D+G +
Sbjct: 470 LTENEVKITRYR------KIENKDGEFYQ---------IVLDETPFYAEGGGQVGDKGVL 514

Query: 592 EGLFGSFYVRNVQIYGGFVIH-IGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHM 650
           E    S  + + +      I  I +L +      V      KVD  +RK    NH+ TH+
Sbjct: 515 ENAAESIEILDTKKENNLNISLIATLPQ-----DVKASFTAKVDLSKRKDTENNHSATHL 569

Query: 651 LNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSK 710
           L+ ALR VLG HV+QKGS V P+ LRFDFSH   +  E    +E  VNE+I+  + +   
Sbjct: 570 LHEALRNVLGTHVEQKGSFVGPDYLRFDFSHFSKMTEEEWAAVEQQVNEKIRKNIALQEY 629

Query: 711 EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLS 770
                +     G  A+FGE Y D VR++  G                  S ELCGGTH+ 
Sbjct: 630 RNIPIQEAMDKGAMALFGEKYGDNVRMIEFG-----------------TSKELCGGTHVK 672

Query: 771 NTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKNQ 830
           NT E   F + SE   A GIRRI A+T   A + FE   +LEK   + ++     L+   
Sbjct: 673 NTGEIGLFKIESEGSAAAGIRRIEAITGSKAREYFE---TLEKNYQEIAQ----FLKSKD 725

Query: 831 VRKAQKKVAEENLQKAVKVATETAEAAASNG------------KPFCISRVEVGLDAAAV 878
           V K+ +K+ EEN     ++ +  AE A                K   + +    +DA ++
Sbjct: 726 VLKSVQKLVEENQSLKSEIESFKAEKAKQEALQWKNEYQDKGDKKLLVKK--TSMDAGSI 783

Query: 879 REAVLKVIEQKGMP-VMVFSTDETTNKAVVCAGVPEKSDQSKQ 920
           ++ V ++  +K +P  +        +K ++  GV +   Q+ Q
Sbjct: 784 KDIVFQL--KKEIPGSLTIILSNAGDKPMITIGVSDDLTQTYQ 824


>gi|395447943|ref|YP_006388196.1| alanyl-tRNA synthetase [Pseudomonas putida ND6]
 gi|388561940|gb|AFK71081.1| alanyl-tRNA synthetase [Pseudomonas putida ND6]
          Length = 878

 Score =  586 bits (1510), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 351/895 (39%), Positives = 506/895 (56%), Gaps = 93/895 (10%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F +FFE++ H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 7   SAEIREAFLRFFEEQGHTRVASSSLIPNNDPTLLFTNAGMNQFKDCFLGA-----EKRAY 61

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           TRA ++QKC+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AW  LT  +
Sbjct: 62  TRAVSSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAITFAWTFLTSEQ 121

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFW 228
              LP ++L+ T +        A D+EA DIW K   +PA R++  G         DNFW
Sbjct: 122 WLNLPKEKLWVTVY--------ATDDEAYDIWTKEVGVPAERMVRIGDNKGAPYASDNFW 173

Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
            MGDTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG L PLP
Sbjct: 174 TMGDTGPCGPCTEIFYDHGPDIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLP 233

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
           A  VDTG+G ER++++LQ+  SNY+ D+F  +  A  +A G            ++    +
Sbjct: 234 APSVDTGMGLERVSAVLQHVHSNYEIDLFQNLLAAAAKAIGC-----------SNDGQAS 282

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            +VVADHIR+  F IADG  P NEGR YVLRRI+RRA R+G++ L A+  FF  +V  + 
Sbjct: 283 LKVVADHIRSCGFLIADGVLPSNEGRGYVLRRIIRRACRHGNK-LGAKGSFFYQIVAALA 341

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
             MG+ FPELK ++AHI  ++ AEE  F KTL +G+   ++    ++G V+ G   F L+
Sbjct: 342 AEMGEAFPELKSQQAHIERVLKAEEEQFAKTLEQGLRILEQDLAQLKGDVVPGDVVFKLY 401

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFP+DLT  +A ER L +D  GF   MD  RER+RSA       A  MD ++     
Sbjct: 402 DTYGFPMDLTADIARERELTIDEAGFEREMDAQRERARSAS------AFGMDYNS----- 450

Query: 527 KRGVLATDDSFKFIWFQ--DHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
              ++  D + +F+ +   + +  I A+Y   + ++ +  G +  +VL  + FYAE GGQ
Sbjct: 451 ---LVKVDSATEFLGYDTTEGQGKIIALYKDGQSVDQLGEGEQGVVVLDRTPFYAESGGQ 507

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           + D GF++     F VR+    GG  +H G +  GA    +G  V  KVD D +   + N
Sbjct: 508 VGDSGFLQAGAARFDVRDTTKTGGAFLHHGVVASGA--LLIGSPVEAKVDADVQHATSLN 565

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ ALR+VLG+HV QKGS+V  ++LRFDFSH + V PE ++++E IVN +I+  
Sbjct: 566 HSATHLLHEALRQVLGEHVQQKGSLVDSQRLRFDFSHFEAVKPEQIKQLEDIVNREIRKN 625

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
             V ++   +  AK   G  A+FGE Y D VRV+++G                  S ELC
Sbjct: 626 TPVETELTDIETAKA-KGAMALFGEKYGDTVRVLSMGG---------------DFSVELC 669

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK-IEG 823
           GG H   T +   F ++SE G+A G+RRI AVT      A     + E++V +A++ ++G
Sbjct: 670 GGIHAKRTGDISLFKIISEGGVASGVRRIEAVT---GAAALAYLNAAEEQVKEAAQLVKG 726

Query: 824 SLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEV-----------G 872
           +   ++ +      V E N Q   ++    A+AA++ G     + VEV           G
Sbjct: 727 N---RDNLIDKLSAVLERNRQLEKQLEQLQAKAASAAGDDLSNAAVEVKGAKVLAARLDG 783

Query: 873 LDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWL 927
            D  A+   V ++  + G  V++  + E   K V+ AGV +  D S QL+  + +
Sbjct: 784 QDGKALLALVDQLKNKLGHAVILLGS-EHEGKVVLVAGVTK--DLSSQLKAGDLM 835


>gi|260773533|ref|ZP_05882449.1| alanyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
 gi|260612672|gb|EEX37875.1| alanyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
          Length = 860

 Score =  586 bits (1510), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 356/927 (38%), Positives = 512/927 (55%), Gaps = 90/927 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           +VR  F  FFE K H    SS +VP NDPTLLF NAGMNQ+K  FLG      +    TR
Sbjct: 7   EVRRAFLSFFESKGHQIVDSSSLVPANDPTLLFTNAGMNQFKDCFLGL-----EKRAYTR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
           A   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI++AWE LT+V +L
Sbjct: 62  ATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTEVVKL 121

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFGCK--------DNFWEMG 231
           P +RL  T +          D+EA +IW +   +P  R++  G K        DNFW+MG
Sbjct: 122 PKERLLVTVY--------QTDDEAFNIWHQQIGIPQDRIIRIGDKPGGKAYESDNFWQMG 173

Query: 232 DTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKH 289
           DTGPCGPC+EI YD   +           D    IEIWN+VF+QFNR +DG ++PLP   
Sbjct: 174 DTGPCGPCTEIFYDHGEHIWGGPPGSAEEDGDRFIEIWNVVFMQFNRHADGKMEPLPKPS 233

Query: 290 VDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRV 349
           VDTG+G ER+++I Q   SNY+ DVF  +  A  +  G +           D  + + RV
Sbjct: 234 VDTGMGIERISAITQGVHSNYEIDVFQTLIKAAAEVIGYQ-----------DLANQSLRV 282

Query: 350 VADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVM 409
           VADHIR+ +F I DG  P NEGR YVLRRI+RRAVR+G++ L AQ  FF+ LV  + +VM
Sbjct: 283 VADHIRSCAFLIVDGVMPSNEGRGYVLRRIIRRAVRHGNK-LGAQGAFFHKLVAPLAEVM 341

Query: 410 GDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTY 469
           G    ELK++ A + +++  EE +FG+TL +G+     A   V+G VL G   F L+DTY
Sbjct: 342 GSAGEELKRQHALVEKVLRIEEENFGRTLERGMAILNDALDAVEGSVLDGDTVFKLYDTY 401

Query: 470 GFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRG 529
           GFP DLT  +A ERG  +D EGF  AM+E R+R+R A N           D  +      
Sbjct: 402 GFPADLTNDVARERGFTIDEEGFEAAMEEQRQRARDAGN--------FGTDYNS------ 447

Query: 530 VLATDDSFKFIWFQ--DHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFD 587
           ++  D   +F  +      S + A++   + + ++  G++  +VL ++ FYAE GGQ  D
Sbjct: 448 LIKVDGETEFCGYSATQKMSPVSALFVDGQEVSALSAGDKAIVVLETTPFYAESGGQCGD 507

Query: 588 EGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTC 647
            G +    G F V + Q  G  + H G + EG    +  + V   VD  RR  I+ NH+ 
Sbjct: 508 AGLLRTASGVFKVEDTQKLGNAIAHYGVMQEGV--LASSDHVEALVDEKRRNAISLNHSA 565

Query: 648 THMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDV 707
           TH+L+ ALR+VLG+HV QKGS+V  E LRFDFSH + +    ++++E +VN QI+    +
Sbjct: 566 THLLHAALRQVLGEHVTQKGSLVRAENLRFDFSHLEAMTAAEIKQVERLVNAQIRLNHVI 625

Query: 708 FSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGT 767
            +    +  AK   G  A+FGE Y + VRV+++G                  S ELCGG 
Sbjct: 626 ETHVMDIESAKQ-KGAMALFGEKYDEQVRVLSMG----------------DFSTELCGGI 668

Query: 768 HLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLE 827
           H S+T +   F +LSE G+A GIRRI AVT   A  A E      +E    +  +   LE
Sbjct: 669 HASHTGDIGLFKILSEGGVAAGIRRIEAVTGEAALDALETQQHKYEEKLSEAMQKTKQLE 728

Query: 828 KNQVRKAQKKVAEE---NLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLK 884
           K ++++ + K+A +   NL   VK+           G    ++++  G D  A+R  V +
Sbjct: 729 K-EIQQLKDKLASQASANLIDQVKLIA---------GVKVLVAQLN-GADNKALRGMVDE 777

Query: 885 VIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGG 944
           +  Q G  +++   +   +K  + AGV   +D + +++  E +    Q + G+ G G+  
Sbjct: 778 LKNQLGSGIILLG-NVADDKVGLIAGVT--NDLTAKVKAGELVNLVAQQVGGK-GGGRPD 833

Query: 945 LASGQGTDAAQVTPAMDLAAEFAAMKL 971
           +A   G+DA  +  A++    + A +L
Sbjct: 834 MAQAGGSDAQALPLALESVDAWIAERL 860


>gi|386011030|ref|YP_005929307.1| protein AlaS [Pseudomonas putida BIRD-1]
 gi|313497736|gb|ADR59102.1| AlaS [Pseudomonas putida BIRD-1]
          Length = 874

 Score =  586 bits (1510), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 351/895 (39%), Positives = 506/895 (56%), Gaps = 93/895 (10%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F +FFE++ H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLRFFEEQGHTRVASSSLIPNNDPTLLFTNAGMNQFKDCFLGA-----EKRAY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           TRA ++QKC+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AW  LT  +
Sbjct: 58  TRAVSSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAITFAWTFLTSEQ 117

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFW 228
              LP ++L+ T +        A D+EA DIW K   +PA R++  G         DNFW
Sbjct: 118 WLNLPKEKLWVTVY--------ATDDEAYDIWTKEVGVPAERMVRIGDNKGAPYASDNFW 169

Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
            MGDTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG L PLP
Sbjct: 170 TMGDTGPCGPCTEIFYDHGPDIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLP 229

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
           A  VDTG+G ER++++LQ+  SNY+ D+F  +  A  +A G            ++    +
Sbjct: 230 APSVDTGMGLERVSAVLQHVHSNYEIDLFQNLLAAAAKAIGC-----------SNDGQAS 278

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            +VVADHIR+  F IADG  P NEGR YVLRRI+RRA R+G++ L A+  FF  +V  + 
Sbjct: 279 LKVVADHIRSCGFLIADGVLPSNEGRGYVLRRIIRRACRHGNK-LGAKGSFFYQIVAALA 337

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
             MG+ FPELK ++AHI  ++ AEE  F KTL +G+   ++    ++G V+ G   F L+
Sbjct: 338 AEMGEAFPELKSQQAHIERVLKAEEEQFAKTLEQGLRILEQDLAQLKGDVVPGDVVFKLY 397

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFP+DLT  +A ER L +D  GF   MD  RER+RSA       A  MD ++     
Sbjct: 398 DTYGFPMDLTADIARERELTIDEAGFEREMDAQRERARSAS------AFGMDYNS----- 446

Query: 527 KRGVLATDDSFKFIWFQ--DHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
              ++  D + +F+ +   + +  I A+Y   + ++ +  G +  +VL  + FYAE GGQ
Sbjct: 447 ---LVKVDSATEFLGYDATEGQGKIIALYKDGQSVDQLGEGEQGVVVLDRTPFYAESGGQ 503

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           + D GF++     F VR+    GG  +H G +  GA    +G  V  KVD D +   + N
Sbjct: 504 VGDSGFLQAGAARFDVRDTTKTGGAFLHHGVVASGA--LLIGSPVEAKVDADVQHATSLN 561

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ ALR+VLG+HV QKGS+V  ++LRFDFSH + V PE ++++E IVN +I+  
Sbjct: 562 HSATHLLHEALRQVLGEHVQQKGSLVDSQRLRFDFSHFEAVKPEQIKQLEDIVNREIRKN 621

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
             V ++   +  AK   G  A+FGE Y D VRV+++G                  S ELC
Sbjct: 622 TPVETELTDIETAKA-KGAMALFGEKYGDTVRVLSMGG---------------DFSVELC 665

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK-IEG 823
           GG H   T +   F ++SE G+A G+RRI AVT      A     + E++V +A++ ++G
Sbjct: 666 GGIHAKRTGDISLFKIISEGGVASGVRRIEAVT---GAAALAYLNAAEEQVKEAAQLVKG 722

Query: 824 SLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEV-----------G 872
           +   ++ +      V E N Q   ++    A+AA++ G     + VEV           G
Sbjct: 723 N---RDNLIDKLSAVLERNRQLEKQLEQLQAKAASAAGDDLSNAAVEVKGAKVLAARLDG 779

Query: 873 LDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWL 927
            D  A+   V ++  + G  V++  + E   K V+ AGV +  D S QL+  + +
Sbjct: 780 QDGKALLALVDQLKNKLGHAVILLGS-EHEGKVVLVAGVTK--DLSSQLKAGDLM 831


>gi|408675247|ref|YP_006874995.1| alanyl-tRNA synthetase [Emticicia oligotrophica DSM 17448]
 gi|387856871|gb|AFK04968.1| alanyl-tRNA synthetase [Emticicia oligotrophica DSM 17448]
          Length = 883

 Score =  586 bits (1510), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 362/923 (39%), Positives = 503/923 (54%), Gaps = 73/923 (7%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF+ K H+   S+P+V  NDPTL+F N+GM Q+K  FLG   P ++     R
Sbjct: 5   EIRKAFLDFFKSKEHLIVPSAPLVAKNDPTLMFNNSGMAQFKDFFLGNGTPPSK-----R 59

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRL 181
             +TQKC+R  GKHNDL+DVG DTYHHT FEMLGNWSFGDYFK EA+EW+WELLT+VY+L
Sbjct: 60  IADTQKCLRVSGKHNDLEDVGFDTYHHTMFEMLGNWSFGDYFKKEALEWSWELLTEVYKL 119

Query: 182 PADRLYATYFGGDEKAGLAPDNEARDIWLKFL-PASRVLPFGCKDNFWEMGDTGPCGPCS 240
           P +R+Y + F G +  G+  D EA DIW + +   +R++    KDNFWEMGDTGPCGPCS
Sbjct: 120 PKERIYVSVFEGSKDDGVPFDQEAFDIWKELIGDENRIILGNKKDNFWEMGDTGPCGPCS 179

Query: 241 EIHYDRTGNRDAA--------SLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDT 292
           EIH D    RD A         LVN D P  IEIWN VF+QF R++D SL  LPAKHVDT
Sbjct: 180 EIHIDL---RDQAEIDMISGKELVNKDHPQVIEIWNNVFMQFERKADKSLVLLPAKHVDT 236

Query: 293 GLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVAD 352
           G+GFERL   +Q K SNYDTDVF      I+Q +G + Y         + VD+A RV+AD
Sbjct: 237 GMGFERLCMAIQGKKSNYDTDVFQNTIQVIEQMSG-KKYGENGTLSTNNYVDVAMRVIAD 295

Query: 353 HIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDV 412
           HIR ++F IADG  P N    YV+RRILRRAVRYG   L   + F   LV ++     +V
Sbjct: 296 HIRAVAFTIADGQLPSNAKAGYVIRRILRRAVRYGYSYLGFDEPFMTKLVPVLADQFAEV 355

Query: 413 FPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK---VLSGQDAFILWDTY 469
           FPELK ++  +  +I  EE SF +TL  G++K     +    +   V+SG+  F L DT+
Sbjct: 356 FPELKAQQDFVGRVIEEEEKSFLRTLETGLKKLDDIIEQATAEKKDVISGEVVFELSDTF 415

Query: 470 GFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRG 529
           GFP DLT L+A E+G  +D EGF  A+ E ++RSR    K+A   + ++  +        
Sbjct: 416 GFPSDLTALIAREKGFKIDEEGFQKALQEQKDRSRKDSAKEATDWVELNEGS-------- 467

Query: 530 VLATDDSFKFIWFQD---HKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
                  F+F+ + +      +IK     ++       G E  IVL  + FYAE GGQ+ 
Sbjct: 468 ------DFEFVGYDEVSAEAQIIKYRKVKTK------AGEEYHIVLDRTPFYAEMGGQVG 515

Query: 587 DEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
           D G I     S  +++ +      IHI +             V+  +D  RR  I  NHT
Sbjct: 516 DTGHIIIGNHSVKIKDTKKENDLFIHISTDNNLDVILQNAGTVVAHIDEARRDKIRVNHT 575

Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD 706
            TH++  A+R+VLG H+ QKGS       RFDFSH   V  E L +IE IVN +I+  + 
Sbjct: 576 VTHLMLAAMRQVLGTHIVQKGSYQDDNITRFDFSHFAKVTDEELGKIEDIVNAKIQENIP 635

Query: 707 VFSK-EATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCG 765
           + +K    +A+A  + G  A FGE Y D VRVV         + DP+       S ELCG
Sbjct: 636 LETKVNMPIADAIAL-GATATFGEKYGDFVRVV---------IFDPK------FSVELCG 679

Query: 766 GTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFE---AACSLEKEV----DDA 818
           GTH+S+T +   F  +SE  ++ G+RR+ A+T G A  +     A  S  KE+    D  
Sbjct: 680 GTHVSSTGKIGIFKFISEGSVSAGVRRVEALTGGTAIASINEQLAVSSQLKEMLRNTDLV 739

Query: 819 SKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAV 878
             +E  L EK  ++K  + +  E LQ+      + AE    NG     ++V V   A A+
Sbjct: 740 KAVENLLAEKATLQKKLEALENEKLQELKNELAQNAENI--NGVNVIAAKVTVP-SADAL 796

Query: 879 REAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRC 938
           ++   ++  +      V  T E   K  +   + E+  + K L     +    + +KG  
Sbjct: 797 KQLCYELKTKVARLYAVIGT-EFNGKPQIAVIIDEEVMKEKGLHAGNIVKELAKEMKG-G 854

Query: 939 GKGKGGLASGQGTDAAQVTPAMD 961
           G G+   A+  G+DA+ +  A++
Sbjct: 855 GGGQPFFATAGGSDASGLEKAIE 877


>gi|205830257|sp|A5W0D9.2|SYA_PSEP1 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
          Length = 874

 Score =  586 bits (1510), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 351/895 (39%), Positives = 506/895 (56%), Gaps = 93/895 (10%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F +FFE++ H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLRFFEEQGHTRVASSSLIPNNDPTLLFTNAGMNQFKDCFLGA-----EKRAY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           TRA ++QKC+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AW  LT  +
Sbjct: 58  TRAVSSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAITFAWTFLTSEQ 117

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFW 228
              LP ++L+ T +        A D+EA DIW K   +PA R++  G         DNFW
Sbjct: 118 WLNLPKEKLWVTVY--------ATDDEAYDIWTKEVGVPAERMVRIGDNKGAPYASDNFW 169

Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
            MGDTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG L PLP
Sbjct: 170 TMGDTGPCGPCTEIFYDHGPDIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLP 229

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
           A  VDTG+G ER++++LQ+  SNY+ D+F  +  A  +A G            ++    +
Sbjct: 230 APSVDTGMGLERVSAVLQHVHSNYEIDLFQNLLAAAAKAIGC-----------SNDGQAS 278

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            +VVADHIR+  F IADG  P NEGR YVLRRI+RRA R+G++ L A+  FF  +V  + 
Sbjct: 279 LKVVADHIRSCGFLIADGVLPSNEGRGYVLRRIIRRACRHGNK-LGAKGSFFYQIVAALA 337

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
             MG+ FPELK ++AHI  ++ AEE  F KTL +G+   ++    ++G V+ G   F L+
Sbjct: 338 AEMGEAFPELKSQQAHIERVLKAEEEQFAKTLEQGLRILEQDLAQLKGDVVPGDVVFKLY 397

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFP+DLT  +A ER L +D  GF   MD  RER+RSA       A  MD ++     
Sbjct: 398 DTYGFPMDLTADIARERELTIDEAGFEREMDAQRERARSAS------AFGMDYNS----- 446

Query: 527 KRGVLATDDSFKFIWFQ--DHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
              ++  D + +F+ +   + +  I A+Y   + ++ +  G +  +VL  + FYAE GGQ
Sbjct: 447 ---LVKVDSATEFLGYDTTEGQGKIIALYKDGQSVDQLGEGEQGVVVLDRTPFYAESGGQ 503

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           + D GF++     F VR+    GG  +H G +  GA    +G  V  KVD D +   + N
Sbjct: 504 VGDSGFLQAGAARFDVRDTTKTGGAFLHHGVVASGA--LLIGSPVEAKVDADVQHATSLN 561

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ ALR+VLG+HV QKGS+V  ++LRFDFSH + V PE ++++E IVN +I+  
Sbjct: 562 HSATHLLHEALRQVLGEHVQQKGSLVDSQRLRFDFSHFEAVKPEQIKQLEDIVNREIRKN 621

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
             V ++   +  AK   G  A+FGE Y D VRV+++G                  S ELC
Sbjct: 622 TPVETELTDIETAKA-KGAMALFGEKYGDTVRVLSMGG---------------DFSVELC 665

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASK-IEG 823
           GG H   T +   F ++SE G+A G+RRI AVT      A     + E++V +A++ ++G
Sbjct: 666 GGIHAKRTGDISLFKIISEGGVASGVRRIEAVT---GAAALAYLNAAEEQVKEAAQLVKG 722

Query: 824 SLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEV-----------G 872
           +   ++ +      V E N Q   ++    A+AA++ G     + VEV           G
Sbjct: 723 N---RDNLIDKLSAVLERNRQLEKQLEQLQAKAASAAGDDLSNAAVEVKGAKVLAARLDG 779

Query: 873 LDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWL 927
            D  A+   V ++  + G  V++  + E   K V+ AGV +  D S QL+  + +
Sbjct: 780 QDGKALLALVDQLKNKLGHAVILLGS-EHEGKVVLVAGVTK--DLSSQLKAGDLM 831


>gi|134295482|ref|YP_001119217.1| alanyl-tRNA synthetase [Burkholderia vietnamiensis G4]
 gi|205830008|sp|A4JDM9.1|SYA_BURVG RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|134138639|gb|ABO54382.1| alanyl-tRNA synthetase [Burkholderia vietnamiensis G4]
          Length = 874

 Score =  586 bits (1510), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 356/924 (38%), Positives = 510/924 (55%), Gaps = 86/924 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R+ F KFFE K H   +SS +VP NDPTL+F N+GM Q+K +FLGT          
Sbjct: 3   AAEIREKFLKFFESKGHTIVRSSSLVPGNDPTLMFTNSGMVQFKDVFLGT-----DQRPY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           TRA   Q+ +RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI +AWELLT VY
Sbjct: 58  TRATTAQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIRFAWELLTTVY 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
           +LP D+L+ T +          D+EA DIW K   +PA R++  G         DNFW M
Sbjct: 118 QLPKDKLWVTVY--------QEDDEAYDIWAKEVGVPAERIIRIGDNKGARYASDNFWTM 169

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWN+VF+QFNR++ G++  LP +
Sbjct: 170 GDTGPCGPCTEIFYDHGPDVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQGNMTRLPKQ 229

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ERL ++LQ+  SNY+ D+F  +  A  + T           + AD  + + +
Sbjct: 230 SVDTGMGLERLAAVLQHVHSNYEIDLFQNLIKAAARVT-----------ETADLNNNSLK 278

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR  SF I DG  PGNEGR YVLRRI+RRA+R+G + L  +  FF+ LV  +V  
Sbjct: 279 VIADHIRACSFLIVDGVIPGNEGRGYVLRRIVRRAIRHGYK-LGRKGAFFHKLVADLVAE 337

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ---GKVLSGQDAFIL 465
           MG  +PELK+ E  + +++  EE  F +T+  G+   + A  DV+   GKVL G+ AF L
Sbjct: 338 MGAAYPELKEAEQRVTDVLRQEEERFFETIEHGMSILEAALADVEAKGGKVLDGELAFKL 397

Query: 466 WDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAAL 525
            DTYGFPLDLT  +  ERG+ VD   F++AM   RE++R+A   +          AT  L
Sbjct: 398 HDTYGFPLDLTADVCRERGMTVDEPAFDDAMARQREQARAAGKFK----------ATQGL 447

Query: 526 HKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
              G   T   ++ I F D K V  A+Y     +  V  G +  +VL  + FYAE GGQ+
Sbjct: 448 EYTGAKTTFHGYEEIAFDDAKVV--ALYVEGSSVGEVKAGQDAVVVLDHTPFYAESGGQV 505

Query: 586 FDEGFIEGLFGSFYVRN-VQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
            D+G +      F V + +++    + H G+L +G     VG+ +  ++D  RR     N
Sbjct: 506 GDQGVLANAATRFAVADTLKVQADVIGHHGTLEQGT--LKVGDVLRAEIDAQRRARTQRN 563

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+++ ALREVLG HV QKGS+V  +K RFDF+H  P+  + +RR+E IVN++I A 
Sbjct: 564 HSATHLMHKALREVLGAHVQQKGSLVDADKTRFDFAHNAPLTDDEIRRVEQIVNDEILAN 623

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
                +     EA    G  A+FGE Y D VRV+ +G                  S ELC
Sbjct: 624 APGIVRVMPYDEA-VKGGAMALFGEKYGDEVRVLDLG-----------------FSRELC 665

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTG--------LAYKAFEAACSLEKEVD 816
           GGTH+  T +   F ++ E G+A GIRR+ A+T          L  +  EAA +L+ +  
Sbjct: 666 GGTHVQRTGDIGLFKIVVEGGVAAGIRRVEAITGDNAVRYVQELDARVNEAAAALKAQPS 725

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
           + ++    + E  QV+  +K++     + A     E A+ A   G  F ++    G DA 
Sbjct: 726 ELTQRIAQVQE--QVKSLEKELGALKSKLASSQGDELAQQAVEVGGVFVLAATLDGADAK 783

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +RE V K+  +     +V +  E    +++    PE    SK+++  E +    Q + G
Sbjct: 784 TLRETVDKLKYKLKSAAIVLAAVEGGKVSLIAGVTPEA---SKKVKAGELVNFVAQQVGG 840

Query: 937 RCGKGKGGLASGQGTDAAQVTPAM 960
           + G G+  +A   GT+ A +  A+
Sbjct: 841 KGG-GRPDMAQAGGTEPANLPGAL 863


>gi|319952367|ref|YP_004163634.1| alanyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
 gi|319421027|gb|ADV48136.1| alanyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
          Length = 871

 Score =  586 bits (1510), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 359/877 (40%), Positives = 494/877 (56%), Gaps = 69/877 (7%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R  F +FF+DK H    S+P+V  +DPTL+F NAGMNQ+K  FLG   P     K 
Sbjct: 3   SQEIRSKFLEFFKDKEHKIVASAPMVIKDDPTLMFTNAGMNQFKEFFLGNTVP-----KD 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           TR  +TQKC+R  GKHNDL++VGKDTYHHT FEMLGNWSFGDYFK EAI WAWE LT V 
Sbjct: 58  TRVTDTQKCLRVSGKHNDLEEVGKDTYHHTMFEMLGNWSFGDYFKEEAITWAWEFLTDVC 117

Query: 180 RLPADRLYATYFGGDEKA-GLAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGP 238
           ++    LY T F G + A  L  D+EA  +W   +P S++L    KDNFWEMGD GPCGP
Sbjct: 118 KIDKTSLYVTVFEGSKDADNLDQDSEALALWKNIVPESQILFGNKKDNFWEMGDQGPCGP 177

Query: 239 CSEIHYD-RTGNRDA----ASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTG 293
           CSEIH D R+    A    ASLVNND P  +EIWN+VF+Q+NR ++G L+ LPAKHVDTG
Sbjct: 178 CSEIHVDIRSAEEKAKVSGASLVNNDHPQVVEIWNLVFMQYNRRANGQLESLPAKHVDTG 237

Query: 294 LGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADH 353
           +GFERL  ++Q   SNYDTDVF PI   I+  T +       G D+  K+D+A RV+ADH
Sbjct: 238 MGFERLCMVMQGVQSNYDTDVFTPIIREIEAITKS-----TYGKDE--KIDIAIRVIADH 290

Query: 354 IRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVF 413
           IR +SF+I+DG  P N G  YV+RRILRRA+RYG   L  ++ F   LVN++   MG  F
Sbjct: 291 IRAVSFSISDGQLPSNTGAGYVIRRILRRAIRYGFTFLDTKEPFMYRLVNVLCDSMGAAF 350

Query: 414 PELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPL 473
           PELK ++  I  +I  EE SF KTL +G+        +   K++ G+ AF L+DT+GFP+
Sbjct: 351 PELKNQKQLIENVIKEEEHSFLKTLDQGLVLLDSIISNADTKIIDGRKAFELYDTFGFPI 410

Query: 474 DLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLAT 533
           DLT L+  ERGL +D +GF+ AM E ++RSRSA         +   D T       VL++
Sbjct: 411 DLTALILSERGLNLDEKGFDVAMQEQKKRSRSASE-------ISKEDWT-------VLSS 456

Query: 534 DDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEG 593
           D   +FI ++  +S +K +      + S   G +   V   + FYAE GGQ+ D+G++E 
Sbjct: 457 DLEQEFIGYEFLESNVKLVKYRK--VTSKKDGEQYQFVFNLTPFYAEGGGQVGDKGYLEA 514

Query: 594 LFGS-FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLN 652
             G   Y+ + +      IH         R    E     VD  +R+    NHT TH+L+
Sbjct: 515 ANGDVIYILDTKKENNETIHFAKNLPKEVR----ETFKAVVDQKQRRRTEANHTATHLLH 570

Query: 653 FALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEA 712
            ALRE+LG HV+QKGS V  + LRFDFSH   +  + L  +E  VN +I+  L +     
Sbjct: 571 QALREILGAHVEQKGSAVHSKYLRFDFSHFSKMTADELAEVERFVNARIEGNLPLEEGRN 630

Query: 713 TLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNT 772
              +     G  A+FGE Y D VR +  G+                 S ELCGGTH+ NT
Sbjct: 631 IPMQTAIEQGAMALFGEKYGDAVRTIRFGK-----------------SIELCGGTHVKNT 673

Query: 773 REAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEV-------DDASKIEGSL 825
            +   F + SE  +A GIRRI A+T+      +    ++  EV        D  K   SL
Sbjct: 674 GDIWHFKIKSEGAVASGIRRIEAITSDAVKDFYSENNNVLSEVKHLLNNSKDPVKALSSL 733

Query: 826 LEKNQVRKAQKKVAEENLQKAVKVATETA-EAAASNGKPFCISRVEVGLDAAAVREAVLK 884
            E+N   K +K+V      KA  +  +   E  + NG  F   +V+  LDA  +++   +
Sbjct: 734 QEENA--KLKKEVEGLLRDKAKNLKGDLLNEIQSINGIDFLAKKVD--LDAGGIKDLSFE 789

Query: 885 VIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQL 921
           + + K    ++ +  E   KA++   + ++   +K+L
Sbjct: 790 MGQNKDNLFLLLAA-ENEGKALLSCYISKELVANKEL 825


>gi|259909418|ref|YP_002649774.1| Alanyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|387872400|ref|YP_005803782.1| protein alaS [Erwinia pyrifoliae DSM 12163]
 gi|224965040|emb|CAX56571.1| Alanyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|283479495|emb|CAY75411.1| alaS [Erwinia pyrifoliae DSM 12163]
          Length = 876

 Score =  586 bits (1510), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 362/935 (38%), Positives = 516/935 (55%), Gaps = 91/935 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R  F  FF+ K H    SS +VP NDPTLLF NAGMNQ+K +FLG    N      +R
Sbjct: 7   EIRQAFLDFFQSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGQDKRN-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A ++Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK EAI +AWELLT  + +
Sbjct: 62  ATSSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIAFAWELLTSSQWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFWEM 230
            LP ++L+ T +          D+EA DIW K +  P  R++  G         DNFW+M
Sbjct: 122 GLPKEKLWVTVY--------ETDDEAFDIWEKEIGVPRERIIRIGDNKGSAYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPCSEI +D   +           D    IEIWNIVF+QFNR+ DG++ PLP  
Sbjct: 174 GDTGPCGPCSEIFFDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQPDGTMLPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+T++LQ+  SNY+ D+F  +  ++ Q TGA   S K           + R
Sbjct: 234 SVDTGMGLERITAVLQHVNSNYEIDLFAQLIKSVAQLTGATDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A+  FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVIPSNENRGYVLRRIIRRAVRHGN-MLGAEGTFFYKLVAPLIAV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK ++A + +++  EE  F KTL +G+    +  +++Q   L G+  F L+DT
Sbjct: 342 MGAAGDDLKSQQAQVEQVLKTEEEQFAKTLERGLALLDEELENLQSDTLDGETVFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           +GFP DLT  +  ER L +D  GF  AM++ R+R+R A             D    +H  
Sbjct: 402 FGFPADLTADVCRERNLKIDEAGFERAMEQQRQRARDASG--------FGCDYNNVIH-- 451

Query: 529 GVLATDDSFKFIWFQDHK--SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
                D + +F  +Q  +  + I AI+   +  +++  G E  IVL ++ FYAE GGQ+ 
Sbjct: 452 ----IDQASEFKGYQQLQLNAAITAIFVDGQAADTISAGREGVIVLDATPFYAESGGQVG 507

Query: 587 DEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
           D G ++G   S  V N Q Y   + H G L    G   VGE V  +VD  RR  I  NH+
Sbjct: 508 DTGELQGNSASLIVSNTQKYAQAIGHSGKLA--TGELRVGERVAAQVDEARRARIRLNHS 565

Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD 706
            TH+L+ ALR+VLG HV QKGS+V  + LRFDFSH + +  + +R++E IVN QI+  L 
Sbjct: 566 ATHLLHAALRQVLGQHVSQKGSLVNDKYLRFDFSHFEAMTQQEIRQVEEIVNAQIRRNLP 625

Query: 707 VFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGG 766
           + +    L  AK  +G  A+FGE Y D VRV+++G                  S ELCGG
Sbjct: 626 IETNIMELEAAKA-HGAMALFGEKYDDHVRVLSMG----------------DFSTELCGG 668

Query: 767 THLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKI----E 822
           TH + T +   F + SE G A G+RRI AVT      A     S  +++ D S +     
Sbjct: 669 THATRTGDIGLFRITSESGTAAGVRRIEAVT---GEGALAQLYSQNQQLADISHLVKANH 725

Query: 823 GSLLEKNQVRKAQKKVAEENLQK------AVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            +L EK +      +  E+ LQ+      A + A+ +++A A  G    +S +   ++  
Sbjct: 726 SNLSEKVRALIDHARALEKQLQQLKDQQAAQESASLSSKAIAVKGTKLLVSELS-DVEPK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T     K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSAIIVLAT-VADGKVSLIAGVTK--DLTDRIKAGELVGELAQKVGG 841

Query: 937 RCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           + G G+  +A   GTDA  +  A+     + A KL
Sbjct: 842 K-GGGRPDMAQAGGTDAMALPAALAGVELWVAAKL 875


>gi|78066024|ref|YP_368793.1| alanyl-tRNA synthetase [Burkholderia sp. 383]
 gi|77966769|gb|ABB08149.1| alanyl-tRNA synthetase [Burkholderia sp. 383]
          Length = 897

 Score =  585 bits (1509), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 355/922 (38%), Positives = 511/922 (55%), Gaps = 82/922 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R+ F KFFE K H   +SS +VP NDPTL+F N+GM Q+K +FLGT DP       
Sbjct: 26  AAEIREKFLKFFESKGHTIVRSSSLVPGNDPTLMFTNSGMVQFKDVFLGT-DPRP----Y 80

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA   Q+ +RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT VY
Sbjct: 81  SRATTAQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIKFAWELLTTVY 140

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
           +LP D+L+ T +          D+EA DIW K   +P  R++  G         DNFW M
Sbjct: 141 QLPKDKLWVTVY--------QEDDEAYDIWAKEVGVPTERIIRIGDNKGARYASDNFWTM 192

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWN+VF+QFNR++ G++  LP +
Sbjct: 193 GDTGPCGPCTEIFYDHGPDVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQGNMTRLPKQ 252

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ERL ++LQ+  SNY+ D+F  +  A  + T           + +D  + + +
Sbjct: 253 SVDTGMGLERLAAVLQHVHSNYEIDLFQNLIKAAARVT-----------EISDLTNNSLK 301

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR  SF I DG  PGNEGR YVLRRI+RRA+R+G + L  +  FF+ LV  +V  
Sbjct: 302 VIADHIRACSFLIVDGVIPGNEGRGYVLRRIVRRAIRHGYK-LGRKGSFFHKLVADLVAE 360

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ---GKVLSGQDAFIL 465
           MG  +PELK+ E  + +++  EE  F +T+  G+   + A  DV+   GKVL G+ AF L
Sbjct: 361 MGVAYPELKEAEQRVTDVLRQEEERFFETIEHGMSILEGALADVEAKGGKVLDGELAFKL 420

Query: 466 WDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAAL 525
            DTYGFPLDLT  +  ERG+ VD   F++AM   RE++R+A   +          A   L
Sbjct: 421 HDTYGFPLDLTADVCRERGMTVDEPAFDDAMARQREQARAAGKFK----------AAQGL 470

Query: 526 HKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
              G   T   ++ I F D K  I A+Y     +  V  G +  +VL  + FYAE GGQ+
Sbjct: 471 EYTGAKTTFHGYEEIAFDDAK--IVALYVDGSSVNEVKTGQDAVVVLDHTPFYAESGGQV 528

Query: 586 FDEGFIEGLFGSFYVRN-VQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
            D+G +      F V + +++    + H G+L +G     VG+ +  ++D  RR     N
Sbjct: 529 GDQGVLANAATRFAVADTLKVQADVIGHHGTLEQGT--LKVGDVLRAEIDAHRRARTQRN 586

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+++ ALREVLG HV QKGS+V  EK RFDF+H  P+  + +RR+E IVN +I A 
Sbjct: 587 HSATHLMHKALREVLGAHVQQKGSLVDAEKTRFDFAHNAPMTDDEIRRVEQIVNNEILAN 646

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
                +     EA    G  A+FGE Y D VRV+ +G                  S ELC
Sbjct: 647 APGIVRVMPYDEA-VKGGAMALFGEKYGDEVRVLDLG-----------------FSRELC 688

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGS 824
           GGTH+S + +   F ++ E G+A GIRR+ A+T   A +  +   +   E   A K + S
Sbjct: 689 GGTHVSRSGDIGFFKIVVEGGVAAGIRRVEAITGDNAVRYVQELDARVNEAAAALKAQPS 748

Query: 825 LLE------KNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAV 878
            L       ++QV+  +K++     + A     E A+ A   G  F ++    G DA  +
Sbjct: 749 ELTQRIAQVQDQVKSLEKELGALKSKLASSQGDELAQQAVEIGGVFVLAATLDGADAKTL 808

Query: 879 REAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRC 938
           RE V K+ ++     +V +  E+   +++    P   D SK+++  E +    Q + G+ 
Sbjct: 809 RETVDKLKDKLKSAAIVLAAVESGKVSLIAGVTP---DASKKVKAGELVNFVAQQVGGKG 865

Query: 939 GKGKGGLASGQGTDAAQVTPAM 960
           G G+  +A   GT+ A +  A+
Sbjct: 866 G-GRPDMAQAGGTEPANLPGAL 886


>gi|205830049|sp|Q39HB7.2|SYA_BURS3 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
          Length = 874

 Score =  585 bits (1509), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 355/922 (38%), Positives = 511/922 (55%), Gaps = 82/922 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R+ F KFFE K H   +SS +VP NDPTL+F N+GM Q+K +FLGT DP       
Sbjct: 3   AAEIREKFLKFFESKGHTIVRSSSLVPGNDPTLMFTNSGMVQFKDVFLGT-DPRP----Y 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA   Q+ +RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT VY
Sbjct: 58  SRATTAQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIKFAWELLTTVY 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
           +LP D+L+ T +          D+EA DIW K   +P  R++  G         DNFW M
Sbjct: 118 QLPKDKLWVTVY--------QEDDEAYDIWAKEVGVPTERIIRIGDNKGARYASDNFWTM 169

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWN+VF+QFNR++ G++  LP +
Sbjct: 170 GDTGPCGPCTEIFYDHGPDVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQGNMTRLPKQ 229

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ERL ++LQ+  SNY+ D+F  +  A  + T           + +D  + + +
Sbjct: 230 SVDTGMGLERLAAVLQHVHSNYEIDLFQNLIKAAARVT-----------EISDLTNNSLK 278

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR  SF I DG  PGNEGR YVLRRI+RRA+R+G + L  +  FF+ LV  +V  
Sbjct: 279 VIADHIRACSFLIVDGVIPGNEGRGYVLRRIVRRAIRHGYK-LGRKGSFFHKLVADLVAE 337

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ---GKVLSGQDAFIL 465
           MG  +PELK+ E  + +++  EE  F +T+  G+   + A  DV+   GKVL G+ AF L
Sbjct: 338 MGVAYPELKEAEQRVTDVLRQEEERFFETIEHGMSILEGALADVEAKGGKVLDGELAFKL 397

Query: 466 WDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAAL 525
            DTYGFPLDLT  +  ERG+ VD   F++AM   RE++R+A   +          A   L
Sbjct: 398 HDTYGFPLDLTADVCRERGMTVDEPAFDDAMARQREQARAAGKFK----------AAQGL 447

Query: 526 HKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
              G   T   ++ I F D K  I A+Y     +  V  G +  +VL  + FYAE GGQ+
Sbjct: 448 EYTGAKTTFHGYEEIAFDDAK--IVALYVDGSSVNEVKTGQDAVVVLDHTPFYAESGGQV 505

Query: 586 FDEGFIEGLFGSFYVRN-VQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
            D+G +      F V + +++    + H G+L +G     VG+ +  ++D  RR     N
Sbjct: 506 GDQGVLANAATRFAVADTLKVQADVIGHHGTLEQGT--LKVGDVLRAEIDAHRRARTQRN 563

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+++ ALREVLG HV QKGS+V  EK RFDF+H  P+  + +RR+E IVN +I A 
Sbjct: 564 HSATHLMHKALREVLGAHVQQKGSLVDAEKTRFDFAHNAPMTDDEIRRVEQIVNNEILAN 623

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
                +     EA    G  A+FGE Y D VRV+ +G                  S ELC
Sbjct: 624 APGIVRVMPYDEA-VKGGAMALFGEKYGDEVRVLDLG-----------------FSRELC 665

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGS 824
           GGTH+S + +   F ++ E G+A GIRR+ A+T   A +  +   +   E   A K + S
Sbjct: 666 GGTHVSRSGDIGFFKIVVEGGVAAGIRRVEAITGDNAVRYVQELDARVNEAAAALKAQPS 725

Query: 825 LLE------KNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAV 878
            L       ++QV+  +K++     + A     E A+ A   G  F ++    G DA  +
Sbjct: 726 ELTQRIAQVQDQVKSLEKELGALKSKLASSQGDELAQQAVEIGGVFVLAATLDGADAKTL 785

Query: 879 REAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRC 938
           RE V K+ ++     +V +  E+   +++    P   D SK+++  E +    Q + G+ 
Sbjct: 786 RETVDKLKDKLKSAAIVLAAVESGKVSLIAGVTP---DASKKVKAGELVNFVAQQVGGKG 842

Query: 939 GKGKGGLASGQGTDAAQVTPAM 960
           G G+  +A   GT+ A +  A+
Sbjct: 843 G-GRPDMAQAGGTEPANLPGAL 863


>gi|254245667|ref|ZP_04938988.1| Alanyl-tRNA synthetase, class IIc [Burkholderia cenocepacia PC184]
 gi|124870443|gb|EAY62159.1| Alanyl-tRNA synthetase, class IIc [Burkholderia cenocepacia PC184]
          Length = 897

 Score =  585 bits (1509), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 354/922 (38%), Positives = 510/922 (55%), Gaps = 82/922 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R+ F KFFE K H   +SS +VP NDPTL+F N+GM Q+K +FLGT DP       
Sbjct: 26  AAEIREKFLKFFESKGHTIVRSSSLVPGNDPTLMFTNSGMVQFKDVFLGT-DPRP----Y 80

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA   Q+ +RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT VY
Sbjct: 81  SRATTAQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIKFAWELLTTVY 140

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
           +LP D+L+ T +          D+EA DIW K   +P  R++  G         DNFW M
Sbjct: 141 QLPKDKLWVTVY--------QEDDEAYDIWAKEVGVPTERIIRIGDNKGARYASDNFWTM 192

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWN+VF+QFNR++ G++  LP +
Sbjct: 193 GDTGPCGPCTEIFYDHGPDVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQGNMTRLPKQ 252

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ERL ++LQ+  SNY+ D+F  +  A  + T           + +D  + + +
Sbjct: 253 SVDTGMGLERLAAVLQHVHSNYEIDLFQNLIKAAARVT-----------EISDLTNNSLK 301

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR  SF I DG  PGNEGR YVLRRI+RRA+R+G + L  +  FF+ LV  +V  
Sbjct: 302 VIADHIRACSFLIVDGVIPGNEGRGYVLRRIVRRAIRHGYK-LGRKGAFFHKLVADLVAE 360

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ---GKVLSGQDAFIL 465
           MG  +PELK+ E  + +++  EE  F +T+  G+   + A  DV+   GKVL G+ AF L
Sbjct: 361 MGTAYPELKEAEQRVTDVLRQEEERFFETIEHGMSILEAALADVEAKGGKVLDGELAFKL 420

Query: 466 WDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAAL 525
            DTYGFPLDLT  +  ERG+ VD   F++AM   RE++R+A   +          AT  L
Sbjct: 421 HDTYGFPLDLTADVCRERGMTVDEPAFDDAMARQREQARAAGKFK----------ATQGL 470

Query: 526 HKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
              G   T   ++ I F D K V  A+Y     +  V  G +  +VL  + FYAE GGQ+
Sbjct: 471 EYSGAKTTFHGYEEIAFDDAKVV--ALYVDGSAVNEVKAGQDAVVVLDHTPFYAESGGQV 528

Query: 586 FDEGFIEGLFGSFYVRN-VQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
            D+G +      F V + +++    + H G+L +G     VG+ +  ++D  RR     N
Sbjct: 529 GDQGVLANAATRFAVADTLKVQADVIGHHGTLEQGT--LKVGDVLRAEIDAQRRARTQRN 586

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+++ ALREVLG HV QKGS+V  +K RFDF+H  P+  + +RR+E IVN++I A 
Sbjct: 587 HSATHLMHKALREVLGAHVQQKGSLVDADKTRFDFAHNAPMTDDEIRRVEQIVNDEILAN 646

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
                +     EA    G  A+FGE Y D VRV+ +G                  S ELC
Sbjct: 647 APGIVRVMPYDEA-VKGGAMALFGEKYGDEVRVLDLG-----------------FSRELC 688

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGS 824
           GGTH+  T +   F ++ E G+A GIRR+ A+T   A +  +   +   E   A K + S
Sbjct: 689 GGTHVHRTGDIGLFKIVVEGGVAAGIRRVEAITGDNAVRYVQELDARVNEAAAALKAQPS 748

Query: 825 LLEKN------QVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAV 878
            L +       QV+  +K++     + A     E A+ A   G  + ++    G DA  +
Sbjct: 749 ELTQRIAQVQEQVKSLEKELGALKSKLASSQGDELAQQAVEIGGVYVLAATLDGADAKTL 808

Query: 879 REAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRC 938
           RE V K+ ++     +V +  E    +++    P   D SK+++  E +    Q + G+ 
Sbjct: 809 RETVDKLKDKLKSAAIVLAAVEGGKVSLIAGVTP---DASKKVKAGELVNFVAQQVGGKG 865

Query: 939 GKGKGGLASGQGTDAAQVTPAM 960
           G G+  +A   GT+ A +  A+
Sbjct: 866 G-GRPDMAQAGGTEPANLPGAL 886


>gi|257465412|ref|ZP_05629783.1| alanyl-tRNA synthetase [Actinobacillus minor 202]
 gi|257451072|gb|EEV25115.1| alanyl-tRNA synthetase [Actinobacillus minor 202]
          Length = 874

 Score =  585 bits (1509), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 352/934 (37%), Positives = 511/934 (54%), Gaps = 87/934 (9%)

Query: 61  TKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLT 120
           +++R +F  FF+ K H   +SS +VP NDPTLLF NAGMNQ+K +FLG      +    T
Sbjct: 5   SEIRQSFLDFFQSKGHTVVESSSLVPENDPTLLFTNAGMNQFKDVFLGL-----EKRPYT 59

Query: 121 RACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KV 178
           RA   Q+C+RAGGKHNDL++VG    HHTFFEM+GN+SFGDYFK +AI++ WE LT  + 
Sbjct: 60  RATTAQRCVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKQDAIQFGWEYLTSPQW 119

Query: 179 YRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFWE 229
             LP ++LY T +          D+EA DIW K +  PA  ++  G         DNFW 
Sbjct: 120 LGLPKEKLYVTVY--------ETDDEAYDIWHKIVGVPADHIIRIGDNKGAPYASDNFWA 171

Query: 230 MGDTGPCGPCSEIHYDRTGNRDAASLVNN---DDPTCIEIWNIVFIQFNRESDGSLKPLP 286
           MGDTGPCGPC+EI YD  G++    L      D    IE+WNIVF+QFNR++DG+++ LP
Sbjct: 172 MGDTGPCGPCTEIFYDH-GDKYWGGLPGTPEEDGDRFIEVWNIVFMQFNRQADGTMEKLP 230

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
              VDTG+G ER+T+++Q+  SNY+ D+F  +   I +    +    K           +
Sbjct: 231 KPSVDTGMGLERMTAVMQHVNSNYEIDIFQTLIKTIAELLNVKDLDNK-----------S 279

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            RV+ADHIR+ S+ IADG  P NEGR YVLRRI+RRAVR+G+ +L A++ FF  LV  + 
Sbjct: 280 LRVIADHIRSCSYLIADGVAPSNEGRGYVLRRIIRRAVRHGN-ILGAKEAFFYKLVPTLA 338

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
           +VMG     + Q++AHI++ + AEE  F +TL +G+   + A   V+   LSG  AF L+
Sbjct: 339 QVMGHAGEIVAQKQAHIQKTLKAEEEQFARTLERGLALLEDALTKVENNTLSGDVAFKLY 398

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFPLDLT  +  ER +++D  GF   M   RER++++ N                + 
Sbjct: 399 DTYGFPLDLTADVCRERNIVIDEAGFEAEMQAQRERAKASSN--------------FGVD 444

Query: 527 KRGVLATDDSFKFIWFQD--HKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
              V+  D    FI + +   ++ +  +++    ++ V  G    I+L  + FYAE GGQ
Sbjct: 445 YNNVIKVDGKTDFIGYDNLTAEATVVGLFSNGNAVDVVKSGENAIIILDKTPFYAEMGGQ 504

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           + D G I   F  F+V + Q YG    HIG +   AG   VG++V  +V  +RR  I  N
Sbjct: 505 VGDSGRISTEFCQFHVVDTQKYGQVFGHIGQIE--AGELKVGDKVTAEVAAERRHSIQLN 562

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ ALREVLG HV QKGS+V    LRFDFS  + +  E L  IE IVN +I+  
Sbjct: 563 HSATHLLHSALREVLGTHVMQKGSLVNENGLRFDFSQPEAITKEQLEAIERIVNAKIREN 622

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
           ++V  +E  + EAK   G  A+FGE Y D VRVV +                   S ELC
Sbjct: 623 IEVVIEEMGIEEAKA-KGAMALFGEKYGDVVRVVDMS----------------VFSIELC 665

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGS 824
           GGTH+  T +   F + SE  +A G+RR+ A+T   A         + +   +  K + +
Sbjct: 666 GGTHVKRTGDIGLFKITSEGAVAAGVRRVEAITGEAALAWLHNLQQMTQHSAELLKADST 725

Query: 825 -LLEKNQVRKAQKKVAEENLQ-----KAVKVATETAEAAAS-NGKPFCISRVEVGLDAAA 877
            L+EK Q  + + K  E+ LQ     +A +   + A+ A   NG    ++++E   +   
Sbjct: 726 NLVEKIQQLQDKAKRLEKELQQLKEKQASQAGADLAKQAKQINGVNVVVTQLE-NTEPKV 784

Query: 878 VREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGR 937
           +R  V  +  Q G  ++V  T    +K  +  GV   SD + Q++  E L   +    G 
Sbjct: 785 LRTMVDDLKNQLGSAIVVLGT-VADDKVNLIVGVS--SDLTTQIKAGE-LVGEMATYVGG 840

Query: 938 CGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
            G G+  +A   G++   +  A++ A E+   KL
Sbjct: 841 KGGGRPDMAMAGGSEPQNLAKALNFAQEWIQAKL 874


>gi|453064638|gb|EMF05602.1| alanyl-tRNA ligase [Serratia marcescens VGH107]
          Length = 875

 Score =  585 bits (1508), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 360/935 (38%), Positives = 529/935 (56%), Gaps = 91/935 (9%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSK--L 119
           ++R  F  FF  K H    SS +VP NDPTLLF NAGMNQ+K +FLG       L K   
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLG-------LDKRAY 59

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           +RA  +Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI +AWELLT   
Sbjct: 60  SRATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAISYAWELLTGEN 119

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFW 228
            + LP +RL+ T +          D+EA DIW K +  PA R++  G         DNFW
Sbjct: 120 WFNLPKERLWVTVY--------ETDDEAFDIWQKQIGVPAERIIRIGDNKGAPFASDNFW 171

Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
           +MGDTGPCGPC+EI YD   +           D    IEIWNIVF+QFNR+SDG++ PLP
Sbjct: 172 QMGDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQSDGTMLPLP 231

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
              VDTG+G ER+ ++LQ+  SNY+ D+F  +  A+ + TGA     K           +
Sbjct: 232 KPSVDTGMGLERIAAVLQHVNSNYEIDLFRTLIAAVAKVTGATDLDNK-----------S 280

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            RV+ADHIR+ +F ++DG  P NE R YVLRRI+RRA+R+G+ +L A+D FF  LV  ++
Sbjct: 281 LRVIADHIRSCAFLVSDGVIPSNENRGYVLRRIIRRAIRHGN-MLGAKDTFFYKLVAPLI 339

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
           +VMG    ELK++++ + +++  EE  F +TL +G+    +    +QG  L G+ AF L+
Sbjct: 340 EVMGPAADELKRQQSLVEQVLKTEEEQFARTLERGLALLDEELAKLQGDTLDGETAFRLY 399

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFP+DLT  +  ERGL VD  GF  AM+  R R+R +            AD  +   
Sbjct: 400 DTYGFPVDLTADVCRERGLKVDEAGFEEAMEAQRRRARESSG--------FGADYNS--- 448

Query: 527 KRGVLATDDSFKFIWFQDH---KSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGG 583
              ++  D S +F  + DH   ++ + A++   + +E +  G E  +VL  + FY E GG
Sbjct: 449 ---LIRVDGSSQFSGY-DHDEQQATVIALFRDGQPVEQINAGEEAVVVLDETPFYGESGG 504

Query: 584 QIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAP 643
           Q+ D+G ++     F V + Q YG  + H G L +G+    + + V  ++D +RR  I  
Sbjct: 505 QVGDKGVLKAAGAEFVVNDTQKYGQAIGHQGKLAQGS--LKLNDRVDAQIDAERRNSIRL 562

Query: 644 NHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKA 703
           NH+ TH+L+ ALR+ LGDHV QKGS+V  + LRFDFSH + + PE +R +E +VN+Q++ 
Sbjct: 563 NHSATHLLHAALRQTLGDHVAQKGSLVNDKYLRFDFSHFEAMKPEQIRAVEDLVNQQVRR 622

Query: 704 ELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAEL 763
            L V ++   L +AK   G  A+FGE Y D VRV+ +G                  S EL
Sbjct: 623 NLPVQTELMALEDAKE-KGAMALFGEKYDDNVRVLTMG----------------DFSTEL 665

Query: 764 CGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEG 823
           CGGTH S T +   F +LSE G A GIRRI AVT   A         L ++V    K + 
Sbjct: 666 CGGTHASRTGDIGLFRILSESGTAAGIRRIEAVTGAGAIATLHQQSDLLQDVAQLVKGDS 725

Query: 824 SLLEK------NQVRKAQKKVAE-ENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
           + L        ++ R  +K++ + ++ Q A + A+ +++A   NG    +S+++  ++A 
Sbjct: 726 NNLTDKVRSVLDRTRALEKELQQLKDQQAAQESASLSSQAKLVNGVKLLVSQLD-NVEAK 784

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +R  V  +  Q G  ++V +T    +K  + AGV +  D + +++  E +    Q + G
Sbjct: 785 MLRTMVDDLKNQLGSAIIVLAT-TADDKVSLVAGVTK--DLTDRVKAGELIGNVAQQVGG 841

Query: 937 RCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           + G G+  +A   GTD   +  A++    + A KL
Sbjct: 842 KGG-GRPDMAMAGGTDINALPAALNSVEAWVASKL 875


>gi|398871845|ref|ZP_10627154.1| alanine--tRNA ligase [Pseudomonas sp. GM74]
 gi|398205028|gb|EJM91819.1| alanine--tRNA ligase [Pseudomonas sp. GM74]
          Length = 873

 Score =  585 bits (1508), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 353/893 (39%), Positives = 505/893 (56%), Gaps = 90/893 (10%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F +FFE++ H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLRFFEEQGHTRVASSSLIPGNDPTLLFTNAGMNQFKDCFLGQ-----EKRAY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--K 177
           TRA ++QKC+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI +AW  LT  K
Sbjct: 58  TRAVSSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAISYAWNFLTSDK 117

Query: 178 VYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFW 228
              LP ++L+ T +        A D+EA DIW K   +PA R++  G         DNFW
Sbjct: 118 WLNLPKEKLWVTVY--------ASDDEAYDIWTKEVGVPAERMVRIGDNKGAPYASDNFW 169

Query: 229 EMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
            MGDTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG L PLP
Sbjct: 170 TMGDTGPCGPCTEIFYDHGADIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLP 229

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
           A  VDTG+G ER++++LQ+  SNY+ D+F  +  A  +A G             +    +
Sbjct: 230 APSVDTGMGLERISAVLQHVHSNYEIDLFQSLLSASAKAIGC-----------TNDAQAS 278

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            +VVADHIR+  F +ADG  P NEGR YVLRRI+RRA R+G++ L A+  FF  +V  +V
Sbjct: 279 LKVVADHIRSCGFLVADGVLPSNEGRGYVLRRIIRRACRHGNK-LGAKGSFFYQIVAALV 337

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
             MG+ FPELK ++AHI  ++ AEE  F KTL +G++  ++   +++G V+ G   F L+
Sbjct: 338 AEMGEAFPELKSQQAHIERVLKAEEEQFAKTLEQGLKILEQDLAELKGDVVPGDVVFKLY 397

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFP+DLT  +A ER L +D EGF   M+  R R+RSA       +  MD ++     
Sbjct: 398 DTYGFPMDLTGDIARERSLTIDEEGFEREMEAQRVRARSAS------SFGMDYNS----- 446

Query: 527 KRGVLATDDSFKFIWFQDHKSVIK--AIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQ 584
              ++  D   +F  + D + + K  A+Y   + ++ +  G+E  IVL  + FYAE GGQ
Sbjct: 447 ---LVKVDVDTEFTGYTDTRGLAKIVALYKDGQSVDVLSEGDEGVIVLDKTPFYAESGGQ 503

Query: 585 IFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
           + D G+++     F VR+    GG  +H G L  G+    VG  V   VD + R   + N
Sbjct: 504 VGDCGYLQAGSARFDVRDTTKTGGAFLHHGILDSGS--LIVGAPVETHVDAEVRHATSLN 561

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+L+ ALR+VLGDHV QKGS+V  ++LRFDFSH + + PE ++ +E IVN +I+  
Sbjct: 562 HSATHLLHAALRQVLGDHVQQKGSLVDSQRLRFDFSHFEAIKPEQIKALEEIVNAEIRRN 621

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
            +V ++E  +  AK   G  A+FGE Y D VRV+++G                  S ELC
Sbjct: 622 SEVETEETDIETAKQ-KGAMALFGEKYGDNVRVLSMG----------------DFSVELC 664

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAF--------EAACSLEKEVD 816
           GG H + T +     ++SE G+A G+RRI AVT   A            EAA  ++   D
Sbjct: 665 GGIHANRTGDIGLLKIISEGGVASGVRRIEAVTGAAALAYLNAAEEQLKEAASLVKGSRD 724

Query: 817 DASKIEGSLLEKNQVRKAQKKVAEENLQ-KAVKVATETAEAAASNGKPFCISRVEV-GLD 874
           +      ++LE+N++ + Q     E LQ KA   A +   A A + K   +  V + G D
Sbjct: 725 NLIDKLSAVLERNRLLEKQL----EQLQAKAASAAGDDLSAQALDVKDVKVLAVRLDGQD 780

Query: 875 AAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWL 927
             A+   V ++  + G  V++  +     K V+ AGV +  D + QL+  + +
Sbjct: 781 GKALLALVDQLKNKLGRAVILLGSVH-EEKVVLVAGVTK--DLTGQLKAGDLM 830


>gi|336314149|ref|ZP_08569070.1| alanine--tRNA ligase [Rheinheimera sp. A13L]
 gi|335881662|gb|EGM79540.1| alanine--tRNA ligase [Rheinheimera sp. A13L]
          Length = 872

 Score =  585 bits (1508), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 377/936 (40%), Positives = 529/936 (56%), Gaps = 90/936 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R  F  FF  K H    SS ++P NDPTLLF NAGM Q+K +FLG    +      
Sbjct: 3   SAQLRRAFLDFFASKGHQIVSSSSLIPGNDPTLLFTNAGMVQFKDVFLGQDKRS-----Y 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
            RA   Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK +AI++AWE LT+V 
Sbjct: 58  NRAVTAQRCLRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIQYAWEFLTEVL 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFWEM 230
           +LP ++L+ T +        A D+EA DIW K +  PA R +  G         DNFW M
Sbjct: 118 KLPKEKLWITVY--------ATDDEAFDIWTKEMGVPAERAIRIGDNKGAPYASDNFWAM 169

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWN VF+QFNR +DG ++PLP  
Sbjct: 170 GDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGRMEPLPKP 229

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+ +ILQN  SNY+ D F  +  A  + TGA            D  D + R
Sbjct: 230 SVDTGMGLERIAAILQNVHSNYEIDTFAALIKATAEITGA-----------TDLNDKSLR 278

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           VVADHIR+ SF +ADG  P NEGR YVLRRI+RRA+R+G++ L A+  FF+ LV  + + 
Sbjct: 279 VVADHIRSCSFLVADGVMPSNEGRGYVLRRIIRRAIRHGNK-LGAKGVFFSKLVGALAQQ 337

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK-VLSGQDAFILWD 467
           MG+ +PEL +++A I +++A EE  FGKTL +G+   ++A  D+ G  V+ G+ AF L+D
Sbjct: 338 MGEAYPELIEKQAVIEKVLALEEEQFGKTLERGLGILEEALADLNGSTVIPGEVAFKLYD 397

Query: 468 TYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHK 527
           TYGFPLDLT  +A ERGL VD  GF  +M+  R+R++ A N          AD   AL  
Sbjct: 398 TYGFPLDLTSDVARERGLTVDQAGFEASMEAQRKRAQQASN--------FGADYNQALTS 449

Query: 528 RGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFD 587
                  D   +   Q    V++ +  G+  + ++  G +  ++L  + FYAE GGQ  D
Sbjct: 450 A---QCTDFTGYTQIQGKAKVVEILLEGNA-VNALTDGQQALVILDQTPFYAESGGQSGD 505

Query: 588 EGFIEGLFGS-FYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
            G +    G+ F V +    G    H GSL    G  ++G+ V   +D  RR+ I  NH+
Sbjct: 506 AGVLTLANGAVFTVADTIKVGKAFAHKGSLK---GALAIGDLVDAAIDNARREAIRKNHS 562

Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD 706
            TH+L+ ALR VLG+HV QKGS+V  E+LRFDFSH + V  + +RRIE +VNEQ++   +
Sbjct: 563 ATHLLHAALRTVLGEHVTQKGSLVGSERLRFDFSHFEAVKADEIRRIEQMVNEQVQQNHE 622

Query: 707 VFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGG 766
           V ++   + EAK   G  A+FGE Y D VRV+++G                  S ELCGG
Sbjct: 623 VLTRLMNVDEAKAA-GAMALFGEKYDDEVRVLSMG----------------DFSIELCGG 665

Query: 767 THLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDD-ASKIEG-- 823
           TH+S T +   F ++ E GIA GIRRI AV TG    AF     LE++    AS ++G  
Sbjct: 666 THVSRTGDIGLFKIVVESGIAAGIRRIEAV-TGEGALAF--VHKLEQQAQTVASMLKGDV 722

Query: 824 -SLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAA-------SNGKPFCISRVEVGLDA 875
            S+ +K Q     +K  E+ L++ +K    +A  A+        NG    I+ ++ G D 
Sbjct: 723 FSIADKVQQAMDSRKALEKELEQ-LKAKLASAAGASLLEQVQLINGVKVLIAELK-GADP 780

Query: 876 AAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLK 935
            A R  V ++  + G  +++ +T     K  + AGV   SD + +++  + +  A + + 
Sbjct: 781 KAFRTMVDELKNKLGSGILLLAT-AAEGKVSLIAGVT--SDLTGKVQAGQLIGWAAEQVG 837

Query: 936 GRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           G+ G GK  LA   GTD A +   +  AA++ A KL
Sbjct: 838 GKGG-GKPDLAQAGGTDVAALPGVLKAAADYIAAKL 872


>gi|86134548|ref|ZP_01053130.1| Alanyl-tRNA synthetase [Polaribacter sp. MED152]
 gi|85821411|gb|EAQ42558.1| Alanyl-tRNA synthetase [Polaribacter sp. MED152]
          Length = 873

 Score =  585 bits (1508), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 344/874 (39%), Positives = 485/874 (55%), Gaps = 82/874 (9%)

Query: 63  VRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTRA 122
           +R TF  FF+ K+H+   S+P+V  +DPTL+F N+GM  +K  FLG A P     K  R 
Sbjct: 6   IRATFLDFFQKKSHLVVPSAPMVTKDDPTLMFVNSGMAPFKEYFLGNATP-----KKNRI 60

Query: 123 CNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVYRLP 182
            ++QKC+R  GKHNDL++VG DTYHHT FEMLGNWSFGDYFK EAI WAWELLT+VY++ 
Sbjct: 61  TDSQKCLRVSGKHNDLEEVGYDTYHHTLFEMLGNWSFGDYFKKEAIAWAWELLTEVYKID 120

Query: 183 ADRLYATYFGGDEKAG-LAPDNEARDIWLKFLPASRVLPFGCKDNFWEMGDTGPCGPCSE 241
            D LY T F G E A  L  D EA DIW +++   R+L    KDNFWEMG+ GPCGPCSE
Sbjct: 121 KDILYVTVFEGSEDADQLNMDTEAYDIWKEYIAEDRILKGNKKDNFWEMGEQGPCGPCSE 180

Query: 242 IHYD-----RTGNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGF 296
           IH D          D  +L+N D P  +EIWN+VF+Q+NR+++G+L+ LP KH+DTG+GF
Sbjct: 181 IHVDIRSAEEKAKLDGRTLINEDHPQVVEIWNLVFMQYNRKANGTLEELPNKHIDTGMGF 240

Query: 297 ERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYRVVADHIRT 356
           ERL  +LQN  SNYDTDVF PI   I   T      GK      +K D+A RV++DH+R 
Sbjct: 241 ERLCMVLQNVQSNYDTDVFTPIIREIGTITNTS--YGK-----NEKQDIATRVISDHVRA 293

Query: 357 LSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPEL 416
           ++F+IADG  P N G  YV+RRILRRAVRYG   L  ++ F   LV+I+   MG  FPEL
Sbjct: 294 VAFSIADGQLPSNTGAGYVIRRILRRAVRYGFTFLNKKEPFIYRLVSILSDKMGKAFPEL 353

Query: 417 KQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLT 476
           K ++  I  +I  EE SF +TL +G+       ++ + K +SG   F L+DT+GFP+DLT
Sbjct: 354 KSQKQLIENVIKEEETSFLRTLDQGLVLLDGIIENSKSKEISGDKVFELYDTFGFPIDLT 413

Query: 477 QLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDS 536
            L+  E+G  +D +GF   + + + RSR+A         ++  DA               
Sbjct: 414 ALILSEKGYTLDEKGFEEELQKQKNRSRAASEMSTDDWTILIDDAVE------------- 460

Query: 537 FKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFG 596
            +FI +   ++ +K   T    + S   G    +V   + FY E GGQ+ D+G++E   G
Sbjct: 461 -EFIGYDFLEANVK--LTRYRKVTSKKDGEMYQLVFNLTPFYPEGGGQVGDKGYLEDTHG 517

Query: 597 S-FYVRNVQIYGGFVIHIG-SLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFA 654
              Y+ + +     +IH   +L +     ++       VD  +R     NHT TH+L+ A
Sbjct: 518 DVVYILDTKKENNVIIHFAKNLPQ-----NLDANFKAVVDEKQRYRTECNHTATHLLHQA 572

Query: 655 LREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATL 714
           LREVLG HV+QKGS V  + LRFDFSH   +  E L+ +E+ VN +I  +L +       
Sbjct: 573 LREVLGTHVEQKGSAVHSKYLRFDFSHFSKLTTEELQDVENFVNARISGKLPLEESRNIT 632

Query: 715 AEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTRE 774
            E    +G  A+FGE Y D VR +  G+                 S ELCGGTH+ NT +
Sbjct: 633 MEKAIADGAMALFGEKYGDTVRAIKFGK-----------------SIELCGGTHVKNTGD 675

Query: 775 AEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLE--KNQVR 832
              F + SE  +A GIRRI A+T       +        E+ D       LL   KN V 
Sbjct: 676 IWHFKIKSEGAVAAGIRRIEAITNDAVKDFYFDNNRTLFEIKD-------LLNNTKNPV- 727

Query: 833 KAQKKVAEEN--LQKAV-KVATETAEAAAS---------NGKPFCISRVEVGLDAAAVRE 880
           KA +K+ +EN  LQK V ++  E A+  +          NG  F  ++V+  LDA  ++ 
Sbjct: 728 KAVQKLQDENTELQKQVEQLLKEKAQNLSGEIKNQLQEINGVQFLATKVD--LDANGIKN 785

Query: 881 AVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEK 914
               + ++     ++F++  +  KA++   + ++
Sbjct: 786 LAFSLGKEHQNLFLLFASAPSNEKALLTCYISKE 819


>gi|172060378|ref|YP_001808030.1| alanyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
 gi|205829999|sp|B1YNJ6.1|SYA_BURA4 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
           synthetase; Short=AlaRS
 gi|171992895|gb|ACB63814.1| alanyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
          Length = 874

 Score =  585 bits (1507), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 356/924 (38%), Positives = 510/924 (55%), Gaps = 86/924 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R+ F KFFE K H   +SS +VP NDPTL+F N+GM Q+K +FLGT DP       
Sbjct: 3   AAEIREKFLKFFESKGHTIVRSSSLVPGNDPTLMFTNSGMVQFKDVFLGT-DPRP----Y 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA   Q+ +RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI +AWELLT VY
Sbjct: 58  SRATTAQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIRFAWELLTTVY 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
           +LP ++L+ T +          D+EA DIW K   +P  R++  G         DNFW M
Sbjct: 118 QLPKEKLWVTVY--------QEDDEAYDIWAKEVGVPTERIIRIGDNKGARYASDNFWTM 169

Query: 231 GDTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLP 286
           GDTGPCGPC+EI YD      G    +     D    IEIWN+VF+QFNR++ G++  LP
Sbjct: 170 GDTGPCGPCTEIFYDHGPEVWGGPPGSP--EEDGDRYIEIWNLVFMQFNRDAQGNMTRLP 227

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
            + VDTG+G ERL ++LQ+  SNY+ D+F  +  A  + T           + +D  + +
Sbjct: 228 KQSVDTGMGLERLAAVLQHVHSNYEIDLFQNLIKAAARVT-----------EISDLTNNS 276

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            +V+ADHIR  SF I DG  PGNEGR YVLRRI+RRA+R+G + L  +  FF+ LV  +V
Sbjct: 277 LKVIADHIRACSFLIVDGVIPGNEGRGYVLRRIVRRAIRHGYK-LGRKGSFFHKLVADLV 335

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ---GKVLSGQDAF 463
             MG  +PELK+ E  + +++  EE  F +T+  G+   + A  DV+   GKVL G+ AF
Sbjct: 336 AEMGAAYPELKEAEQRVTDVLRQEEERFFETIEHGMSILEAALADVEAKGGKVLDGELAF 395

Query: 464 ILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATA 523
            L DTYGFPLDLT  +  ERG+ VD   F++AM   RE++R+A   +          AT 
Sbjct: 396 KLHDTYGFPLDLTADVCRERGMTVDEPAFDDAMARQREQARAAGKFK----------ATQ 445

Query: 524 ALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGG 583
            L   G   T   ++ I F D K V  A+Y     +  V  G +  +VL  + FYAE GG
Sbjct: 446 GLEYTGAKTTFHGYEEIAFDDAKVV--ALYVDGSAVNEVKAGQDAVVVLDHTPFYAESGG 503

Query: 584 QIFDEGFIEGLFGSFYVRN-VQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIA 642
           Q+ D+G +      F V + +++    V H G+L +G     +G+ +  ++D  RR    
Sbjct: 504 QVGDQGVLANAATRFAVADTLKVQADVVGHHGTLEQGT--LKLGDVLRAEIDAHRRARTQ 561

Query: 643 PNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIK 702
            NH+ TH+++ ALREVLG HV QKGS+V  EK RFDF+H  P+  + +RR+E IVN +I 
Sbjct: 562 RNHSATHLMHKALREVLGAHVQQKGSLVDAEKTRFDFAHNAPMTDDEIRRVEQIVNNEIL 621

Query: 703 AELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAE 762
           A      +     EA    G  A+FGE Y D VRV+ +G                  S E
Sbjct: 622 ANAPGIVRVMPYDEA-VKGGAMALFGEKYGDEVRVLDLG-----------------FSRE 663

Query: 763 LCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIE 822
           LCGGTH+  T +   F ++ E G+A GIRR+ A+T   A +  +   +   E   A K +
Sbjct: 664 LCGGTHVHRTGDIGFFKIVVEGGVAAGIRRVEAITGDNAVRYVQELDARVNEAAAALKAQ 723

Query: 823 GSLLE------KNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAA 876
            S L       ++QV+  +K++     + A     E A+ A   G  + ++    G DA 
Sbjct: 724 PSELTQRIAQVQDQVKSLEKELGALKSKLASSQGDELAQQATEVGGVYVLAATLDGADAK 783

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKG 936
            +RE V K+ ++     +V +  E    +++    P   D SK+++  E +    Q + G
Sbjct: 784 TLRETVDKLKDKLKSAAIVLAAVEGGKVSLIAGVTP---DASKKVKAGELVNFVAQQVGG 840

Query: 937 RCGKGKGGLASGQGTDAAQVTPAM 960
           + G G+  +A   GTD A +  A+
Sbjct: 841 KGG-GRPDMAQAGGTDPANLPGAL 863


>gi|254360816|ref|ZP_04976963.1| alanine--tRNA ligase [Mannheimia haemolytica PHL213]
 gi|261495705|ref|ZP_05992149.1| alanine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|452745287|ref|ZP_21945123.1| alanyl-tRNA ligase [Mannheimia haemolytica serotype 6 str. H23]
 gi|153092290|gb|EDN73359.1| alanine--tRNA ligase [Mannheimia haemolytica PHL213]
 gi|261308617|gb|EEY09876.1| alanine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|452086680|gb|EME03067.1| alanyl-tRNA ligase [Mannheimia haemolytica serotype 6 str. H23]
          Length = 875

 Score =  585 bits (1507), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 354/933 (37%), Positives = 516/933 (55%), Gaps = 84/933 (9%)

Query: 61  TKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLT 120
           + +R +F +FF+ K H    SS +VP NDPTLLF NAGMNQ+K +FLG      +    +
Sbjct: 5   SDIRQSFLEFFQTKGHTIVPSSSLVPENDPTLLFTNAGMNQFKDVFLGL-----EKRPYS 59

Query: 121 RACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KV 178
           RA   Q+C+RAGGKHNDL++VG    HHTFFEM+GN+SFGDYFK +AI++ WE LT  + 
Sbjct: 60  RATTAQRCVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFKQDAIKFGWEFLTSPQW 119

Query: 179 YRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWE 229
             LP ++LY T +          D+EA DIW K   +P+  ++  G         DNFW 
Sbjct: 120 LGLPKEKLYVTVY--------ETDDEAYDIWHKEVGVPSEHIIRIGDNKGAPYASDNFWA 171

Query: 230 MGDTGPCGPCSEIHYDRTGNRDAASLVNN---DDPTCIEIWNIVFIQFNRESDGSLKPLP 286
           MGDTGPCGPC+EI YD  G      L  +   D    IE+WNIVF+QFNR +DG+++ LP
Sbjct: 172 MGDTGPCGPCTEIFYDH-GPEHWGGLPGSPEEDGDRYIEVWNIVFMQFNRLADGTMEKLP 230

Query: 287 AKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMA 346
              VDTG+G ER+T+++Q+  SNY+TD+F  +   +      +    K           +
Sbjct: 231 KPSVDTGMGLERMTAVMQHVNSNYETDIFQTLIKEVATLLNVKDLDNK-----------S 279

Query: 347 YRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVV 406
            RVVADHIR  S+ IADG  P NEGR YVLRRI+RRAVR+G+ +L A++ FF  LV  + 
Sbjct: 280 LRVVADHIRACSYLIADGVLPSNEGRGYVLRRIIRRAVRHGN-ILGAKEAFFYKLVPTLA 338

Query: 407 KVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILW 466
            VMG     L Q++AHI++ + AEE  F +TL +G+   ++A   V+   LSG+ AF L+
Sbjct: 339 TVMGQAGEVLTQKQAHIQKTLKAEEEQFARTLERGLNLLEEALAKVENNTLSGEVAFKLY 398

Query: 467 DTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALH 526
           DTYGFPLDLT  +  ER + +D +GFN  M   RER++++ +       V+  D+     
Sbjct: 399 DTYGFPLDLTADVCRERDIKIDEDGFNAEMTAQRERAKASSSFGTDYNNVIKVDSKTCFS 458

Query: 527 KRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
                + +D+     F + KSV           ES+  G    ++L  + FYAE GGQ+ 
Sbjct: 459 GYTETSLNDATVIGLFSNGKSV-----------ESIQSGENAVVILDKTPFYAEMGGQVG 507

Query: 587 DEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
           D G I     +F V + Q YG    HIG LT G+   SVG++V   VD +RR  I  NH+
Sbjct: 508 DSGQISAEICNFEVVDTQKYGQVFGHIGQLTSGS--LSVGDKVNTIVDRERRHAITLNHS 565

Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD 706
            TH+L+ ALR+VLGDHV QKGS+V    LRFD S  + +    L  +E IVN +++  + 
Sbjct: 566 ATHLLHSALRQVLGDHVAQKGSLVSENILRFDISQPEAITKSQLEEVERIVNAKVRENIQ 625

Query: 707 VFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGG 766
           V  +E  +  AK   G  A+FGE Y + VRVV                E    S ELCGG
Sbjct: 626 VIIEEMDIESAKA-KGAMALFGEKYGEVVRVV----------------EMSDFSIELCGG 668

Query: 767 THLSNTREAEAFALLSEEGIAKGIRRITAVT--TGLAY-----KAFEAACSLEKEVDDAS 819
           TH+  T +   F + SE  +A G+RRI AVT    +A+     +A + +  L K  D  S
Sbjct: 669 THVKQTGDIGLFKITSEGAVAAGVRRIEAVTGENAIAWLHTLQQAVQQSAELLK-ADSHS 727

Query: 820 KIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAAS-NGKPFCISRVEVGLDAAAV 878
            +E  +  + + ++ +K++ +   + A +  ++ A+ A   NG    I ++E  ++  A+
Sbjct: 728 FVEKIVQLQEKAKRTEKELQQLKDKLAAQAGSDLAKQATQINGVNVVIQQLE-NVEPKAL 786

Query: 879 REAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRC 938
           R  V  +  Q G  V+VF+T    +K  +  GV +  D + ++   + + A  + + G+ 
Sbjct: 787 RTMVDDLKNQLGSAVVVFATT-AEDKVNLIVGVTK--DLTDKVNAGQLVGAMAEKVGGKG 843

Query: 939 GKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 971
           G G+  +A   G++   +  A+ LA E+   KL
Sbjct: 844 G-GRPDMAMAGGSEPQHLLQALSLAQEWITAKL 875


>gi|421869092|ref|ZP_16300734.1| Alanyl-tRNA synthetase [Burkholderia cenocepacia H111]
 gi|358070913|emb|CCE51612.1| Alanyl-tRNA synthetase [Burkholderia cenocepacia H111]
          Length = 874

 Score =  585 bits (1507), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 354/922 (38%), Positives = 509/922 (55%), Gaps = 82/922 (8%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           A ++R+ F KFFE K H   +SS +VP NDPTL+F N+GM Q+K +FLGT DP       
Sbjct: 3   AAEIREKFLKFFESKGHTIVRSSSLVPGNDPTLMFTNSGMVQFKDVFLGT-DPRP----Y 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           +RA   Q+ +RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK++AI++AWELLT VY
Sbjct: 58  SRATTAQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIKFAWELLTTVY 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPASRVLPFG-------CKDNFWEM 230
           +LP ++L+ T +          D+EA DIW K   +P  R++  G         DNFW M
Sbjct: 118 QLPKEKLWVTVY--------QEDDEAYDIWAKEVGVPTERIIRIGDNKGARYASDNFWTM 169

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +           D    IEIWN+VF+QFNR++ G++  LP +
Sbjct: 170 GDTGPCGPCTEIFYDHGPDVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQGNMTRLPKQ 229

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ERL ++LQ+  SNY+ D+F  +  A  + T           + +D  + + +
Sbjct: 230 SVDTGMGLERLAAVLQHVHSNYEIDLFQNLIKAAARVT-----------EISDLTNNSLK 278

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR  SF I DG  PGNEGR YVLRRI+RRA+R+G + L  +  FF+ LV  +V  
Sbjct: 279 VIADHIRACSFLIVDGVIPGNEGRGYVLRRIVRRAIRHGYK-LGRKGAFFHKLVADLVAE 337

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ---GKVLSGQDAFIL 465
           MG  +PELK+ E  + +++  EE  F +T+  G+   + A  DV    GKVL G+ AF L
Sbjct: 338 MGTAYPELKEAEQRVTDVLRQEEERFFETIEHGMSILEAALADVDAKGGKVLDGELAFKL 397

Query: 466 WDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAAL 525
            DTYGFPLDLT  +  ERG+ VD   F++AM   RE++R+A   +          AT  L
Sbjct: 398 HDTYGFPLDLTADVCRERGMTVDEPAFDDAMARQREQARAAGKFK----------ATQGL 447

Query: 526 HKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQI 585
              G   T   ++ I F D K V  A+Y     +  V  G +  +VL  + FYAE GGQ+
Sbjct: 448 EYSGAKTTFHGYEEIAFDDAKVV--ALYVDGSAVNEVKAGQDAVVVLDHTPFYAESGGQV 505

Query: 586 FDEGFIEGLFGSFYVRN-VQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPN 644
            D+G +      F V + +++    + H G+L +G     VG+ +  ++D  RR     N
Sbjct: 506 GDQGVLANAATRFAVADTLKVQADVIGHHGTLEQGT--LKVGDVLRAEIDAQRRARTQRN 563

Query: 645 HTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAE 704
           H+ TH+++ ALREVLG HV QKGS+V  EK RFDF+H  P+  + +RR+E IVN +I A 
Sbjct: 564 HSATHLMHKALREVLGAHVQQKGSLVDAEKTRFDFAHNAPMTDDEIRRVEQIVNNEILAN 623

Query: 705 LDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELC 764
                +     EA    G  A+FGE Y D VRV+ +G                  S ELC
Sbjct: 624 APGIVRVMPYDEA-VKGGAMALFGEKYGDEVRVLDLG-----------------FSRELC 665

Query: 765 GGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGS 824
           GGTH+  T +   F ++ E G+A GIRR+ A+T   A +  +   +   E   A K + S
Sbjct: 666 GGTHVHRTGDIGLFKIVVEGGVAAGIRRVEAITGDNAVRYVQELDARVNEAAAALKAQPS 725

Query: 825 LLE------KNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAV 878
            L       ++QV+  +K++     + A     E A+ A   G  + ++    G DA  +
Sbjct: 726 ELTQRIAQVQDQVKSLEKELGALKSKLASSQGDELAQQAVEIGGVYVLAATLDGADAKTL 785

Query: 879 REAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRC 938
           RE V K+ ++     +V +  E    +++    P   D SK+++  E +    Q + G+ 
Sbjct: 786 RETVDKLKDKLKSAAIVLAAVEGGKVSLIAGVTP---DASKKVKAGELVNFVAQQVGGKG 842

Query: 939 GKGKGGLASGQGTDAAQVTPAM 960
           G G+  +A   GT+ A +  A+
Sbjct: 843 G-GRPDMAQAGGTEPANLPGAL 863


>gi|388467449|ref|ZP_10141659.1| alanine--tRNA ligase [Pseudomonas synxantha BG33R]
 gi|388011029|gb|EIK72216.1| alanine--tRNA ligase [Pseudomonas synxantha BG33R]
          Length = 872

 Score =  584 bits (1506), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 350/891 (39%), Positives = 507/891 (56%), Gaps = 87/891 (9%)

Query: 60  ATKVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKL 119
           + ++R+ F +FFE++ H    SS ++P NDPTLLF NAGMNQ+K  FLG      +    
Sbjct: 3   SAEIREAFLRFFEEQGHTRVASSSLIPGNDPTLLFTNAGMNQFKDCFLGQ-----EKRAY 57

Query: 120 TRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLTKVY 179
           TRA ++QKC+RAGGK++DL++VG    HHTFFEMLGN+SFGDYFK +AI +AW  LT V 
Sbjct: 58  TRATSSQKCVRAGGKNSDLENVGYTARHHTFFEMLGNFSFGDYFKKDAITFAWTFLTGVL 117

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFWEM 230
           +LP ++L+ T +        A D+EA DIW + +  PA R++  G         DNFW M
Sbjct: 118 KLPKEKLWVTVY--------ATDDEAYDIWTQQIGVPAERMIRIGDNKGAPYASDNFWTM 169

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPC+EI YD   +         + D    IEIWN VF+QFNR +DG L PLPA 
Sbjct: 170 GDTGPCGPCTEIFYDHGADIWGGPPGSPDEDGDRYIEIWNNVFMQFNRTADGVLHPLPAP 229

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+++++Q+  SNY+ D+F  +  A   A G             ++   + +
Sbjct: 230 SVDTGMGLERISAVMQHVHSNYEIDLFTNLLSASAAAIGC-----------TNEGQSSLK 278

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           VV+DHIR+  F IADG  P NEGR YVLRRI+RRA R+G++ L A   FF  +V  +V  
Sbjct: 279 VVSDHIRSCGFLIADGVLPSNEGRGYVLRRIIRRACRHGNK-LGATGSFFYKIVAALVAE 337

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MGD FPELKQ++++I  ++ AEE  F KTL  G++  ++   +++G V+ G   F L+DT
Sbjct: 338 MGDAFPELKQQQSNIERVLKAEEEQFSKTLEHGLKILEQDLAELKGSVVPGDVVFKLYDT 397

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           YGFP+DLT  +A ER L +D  GF   M+  R R+RSA              ++  L   
Sbjct: 398 YGFPMDLTADIARERELTIDEAGFEREMEAQRVRARSA--------------SSFGLDYN 443

Query: 529 GVLATDDSFKFIWFQDH--KSVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
            ++  D   +FI ++     + I AIY   + ++ +  G E  +VL  + FYAE GGQI 
Sbjct: 444 TLVKVDVPTEFIGYKATAGSAKIVAIYKDGKSVDVLSEGEEAVVVLDQTPFYAESGGQIG 503

Query: 587 DEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
           D GF+    G F VR+    GG  +H G L  G+   +VG  V  +VD D R   A NH+
Sbjct: 504 DCGFLSSTSGRFEVRDTTKTGGAFLHHGVLVLGS--LTVGAPVDTQVDADVRHATALNHS 561

Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD 706
            TH+L+ ALR+VLG+HV QKGS+V  ++LRFDFSH + + PE ++ +E IVN +++    
Sbjct: 562 ATHLLHAALRQVLGEHVQQKGSLVDSQRLRFDFSHFEAIKPEQIKALEDIVNAEVRRNTP 621

Query: 707 VFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGG 766
           V ++E  +  AK   G  A+FGE Y D VRV+++G                S S ELCGG
Sbjct: 622 VETEETDIETAKA-KGAMALFGEKYGDEVRVLSMGG---------------SFSVELCGG 665

Query: 767 THLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAF--------EAACSLEKEVDDA 818
            H + T +     ++SE G+A G+RRI AVT   A            EAA  ++   D+ 
Sbjct: 666 IHANRTGDIGLLKIISEGGVASGVRRIEAVTGAAALAYLNAAEEQLKEAASLVKGSRDNL 725

Query: 819 SKIEGSLLEKNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCI--SRVEVGLDAA 876
                ++LE+N   +A +K  E+   KA   A +   A+A + K   +  +R++ G D  
Sbjct: 726 IDKLSAVLERN---RALEKQLEQLQAKAASAAGDDLSASAVDVKDVKVLAARLD-GQDGK 781

Query: 877 AVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWL 927
           A+   V ++  + G  V++  +    +K V+ AGV +  D + QL+  + +
Sbjct: 782 ALLALVDQLKNKLGRAVILLGSVH-EDKVVLVAGVTK--DLTGQLKAGDLM 829


>gi|188534789|ref|YP_001908586.1| Alanyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
 gi|188029831|emb|CAO97712.1| Alanyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
          Length = 875

 Score =  584 bits (1506), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 357/918 (38%), Positives = 513/918 (55%), Gaps = 99/918 (10%)

Query: 62  KVRDTFFKFFEDKNHVNWKSSPVVPVNDPTLLFANAGMNQYKPIFLGTADPNTQLSKLTR 121
           ++R +F  FF+ K H    SS +VP NDPTLLF NAGMNQ+K +FLG    +      +R
Sbjct: 7   EIRQSFLDFFQSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGQDKRS-----YSR 61

Query: 122 ACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKNEAIEWAWELLT--KVY 179
           A ++Q+C+RAGGKHNDL++VG    HHTFFEMLGN+SFGDYFK EAI +AWELLT  + +
Sbjct: 62  ATSSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQEAIAFAWELLTSDQWF 121

Query: 180 RLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PASRVLPFG-------CKDNFWEM 230
            LP ++L+ T +          D+EA +IW K +  P  R++  G         DNFW+M
Sbjct: 122 GLPKEKLWVTVY--------ETDDEAFEIWEKEIGVPRERIIRIGDNKGSAYASDNFWQM 173

Query: 231 GDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIEIWNIVFIQFNRESDGSLKPLPAK 288
           GDTGPCGPCSEI +D   +           D    IEIWNIVF+QFNR+SDG++ PLP  
Sbjct: 174 GDTGPCGPCSEIFFDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQSDGTMLPLPKP 233

Query: 289 HVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGADDADKVDMAYR 348
            VDTG+G ER+T++LQ+  SNY+ D+F  +  ++ Q TGA   S K           + R
Sbjct: 234 SVDTGMGLERITAVLQHVNSNYEIDLFAQLIKSVAQVTGAEDLSNK-----------SLR 282

Query: 349 VVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKV 408
           V+ADHIR+ +F IADG  P NE R YVLRRI+RRAVR+G+ +L A+  FF  LV  ++ V
Sbjct: 283 VIADHIRSCAFLIADGVIPSNENRGYVLRRIIRRAVRHGN-MLGAEGTFFFKLVAPLIAV 341

Query: 409 MGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDT 468
           MG    +LK++++ + +++  EE  F KTL +G+    +  +++QG  L G+  F L+DT
Sbjct: 342 MGTAGEDLKRQQSQVEQVLKTEEEQFAKTLERGLALLDEELENLQGDTLDGETVFRLYDT 401

Query: 469 YGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKR 528
           +GFP+DLT  +  ER L +D  GF  AM++ R+R+R A            AD    +H  
Sbjct: 402 FGFPVDLTADVCRERNLKIDEAGFERAMEQQRQRARKASG--------FGADYNNVIH-- 451

Query: 529 GVLATDDSFKFIWFQDHK--SVIKAIYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIF 586
                D + +F  +Q  +  + I AI+   E  +++  G E  IVL S+ FYAE GGQ+ 
Sbjct: 452 ----IDQASEFKGYQQLQLNAAITAIFVDGESADTISAGQEGVIVLDSTPFYAESGGQVG 507

Query: 587 DEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHT 646
           D G + G   SF V +   Y   + H G L   AG+  VG+ V  +VD  RR+ I  NH+
Sbjct: 508 DTGELRGNSASFMVSDTHKYAQAIGHSGKLA--AGKLRVGDSVSAQVDEARRERIRLNHS 565

Query: 647 CTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELD 706
            TH+L+ ALR+VLG HV QKGS+V  + LRFDFSH + +  + +R++E IVN Q++  L 
Sbjct: 566 ATHLLHAALRQVLGHHVAQKGSLVNDKYLRFDFSHFEAMTAQEIRQVEEIVNAQVRRNLS 625

Query: 707 VFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGG 766
           + +    L  AK  +G  A+FGE Y D VRV+++G                  S ELCGG
Sbjct: 626 IETNIMELEAAKA-HGAMALFGEKYDDHVRVLSMG----------------DFSTELCGG 668

Query: 767 THLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSL-----EKEVDDASKI 821
           TH + T +   F + SE G A G+RRI AVT        E A +L     E+ VD A  +
Sbjct: 669 THANRTGDIGLFRITSESGTAAGVRRIEAVTG-------EGALALLYSQNEQLVDIAHLV 721

Query: 822 EG---SLLEKNQVRKAQKKVAEENLQK------AVKVATETAEAAASNGKPFCISRVEVG 872
           +    +L EK +      +  E+ LQ+      A + A+ +++A    G    +S +   
Sbjct: 722 KANNSNLNEKVRALLDHTRALEKQLQQLRDQQAAQESASLSSKAVTLKGTKLLVSELS-D 780

Query: 873 LDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQ 932
           ++   +R  V  +  Q G  ++V +T     K  +  GV +  D + +++  E L   L 
Sbjct: 781 VEPKMLRTMVDDLKNQLGSAIIVLAT-VVDGKVSLITGVTK--DLTDRIKAGE-LVGELA 836

Query: 933 PLKGRCGKGKGGLASGQG 950
              G  G G+  +A   G
Sbjct: 837 LQVGGKGGGRPDMAQAGG 854


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.318    0.135    0.397 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,473,239,329
Number of Sequences: 23463169
Number of extensions: 680971338
Number of successful extensions: 1754175
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6602
Number of HSP's successfully gapped in prelim test: 1703
Number of HSP's that attempted gapping in prelim test: 1691439
Number of HSP's gapped (non-prelim): 9957
length of query: 972
length of database: 8,064,228,071
effective HSP length: 153
effective length of query: 819
effective length of database: 8,769,330,510
effective search space: 7182081687690
effective search space used: 7182081687690
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 82 (36.2 bits)